Query 011536
Match_columns 483
No_of_seqs 270 out of 1827
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 02:27:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011536.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011536hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2414 Putative Xaa-Pro amino 100.0 4E-109 9E-114 799.6 37.7 439 28-466 38-487 (488)
2 PRK10879 proline aminopeptidas 100.0 3.6E-86 7.9E-91 688.1 45.0 414 52-465 1-434 (438)
3 COG0006 PepP Xaa-Pro aminopept 100.0 5.1E-67 1.1E-71 539.1 35.5 369 51-459 4-383 (384)
4 PRK13607 proline dipeptidase; 100.0 5.7E-66 1.2E-70 535.4 34.4 380 56-451 14-439 (443)
5 TIGR02993 ectoine_eutD ectoine 100.0 4E-65 8.7E-70 524.9 36.3 364 51-457 5-388 (391)
6 KOG2737 Putative metallopeptid 100.0 8.2E-67 1.8E-71 500.3 21.6 412 52-468 12-483 (492)
7 PRK09795 aminopeptidase; Provi 100.0 1.4E-64 3E-69 516.7 34.6 346 59-457 2-356 (361)
8 PRK14575 putative peptidase; P 100.0 7.9E-62 1.7E-66 502.2 36.5 354 60-457 12-403 (406)
9 PRK14576 putative endopeptidas 100.0 9.4E-60 2E-64 486.6 37.0 357 59-457 11-402 (405)
10 PRK15173 peptidase; Provisiona 100.0 7E-56 1.5E-60 444.3 33.3 274 157-457 43-320 (323)
11 PRK07281 methionine aminopepti 100.0 3.3E-51 7.1E-56 401.5 26.9 231 209-455 2-283 (286)
12 PRK12897 methionine aminopepti 100.0 4E-51 8.6E-56 396.4 26.3 226 210-450 3-247 (248)
13 PRK12318 methionine aminopepti 100.0 2.2E-50 4.8E-55 397.9 25.6 237 202-454 33-291 (291)
14 TIGR00500 met_pdase_I methioni 100.0 3.4E-50 7.3E-55 390.1 25.6 226 210-450 2-246 (247)
15 cd01087 Prolidase Prolidase. E 100.0 1E-49 2.3E-54 385.7 27.1 233 217-450 1-243 (243)
16 PRK05716 methionine aminopepti 100.0 6.5E-49 1.4E-53 382.3 26.3 231 209-455 3-252 (252)
17 cd01090 Creatinase Creatine am 100.0 1.6E-48 3.5E-53 372.9 25.2 215 217-450 1-228 (228)
18 PLN03158 methionine aminopepti 100.0 7.6E-48 1.6E-52 391.4 26.0 238 205-457 131-387 (396)
19 PRK12896 methionine aminopepti 100.0 2.6E-47 5.6E-52 371.7 25.4 229 207-450 6-254 (255)
20 cd01091 CDC68-like Related to 100.0 1.8E-46 4E-51 361.0 23.2 221 217-450 1-243 (243)
21 cd01092 APP-like Similar to Pr 100.0 6.3E-45 1.4E-49 343.8 25.5 206 217-445 1-208 (208)
22 cd01086 MetAP1 Methionine Amin 100.0 1.7E-44 3.6E-49 348.3 25.4 219 217-450 1-238 (238)
23 cd01085 APP X-Prolyl Aminopept 100.0 1E-42 2.3E-47 331.3 24.8 204 218-447 5-221 (224)
24 PF00557 Peptidase_M24: Metall 100.0 8.3E-42 1.8E-46 322.5 21.7 201 218-442 1-207 (207)
25 cd01066 APP_MetAP A family inc 100.0 1.1E-40 2.3E-45 313.3 24.6 205 217-445 1-207 (207)
26 cd01089 PA2G4-like Related to 100.0 1.6E-39 3.4E-44 311.3 22.4 209 217-450 1-228 (228)
27 KOG2413 Xaa-Pro aminopeptidase 100.0 3.5E-35 7.7E-40 299.3 21.5 374 29-462 150-562 (606)
28 KOG2738 Putative methionine am 100.0 4.9E-34 1.1E-38 267.0 20.9 232 209-455 114-364 (369)
29 COG0024 Map Methionine aminope 100.0 1.7E-33 3.8E-38 267.0 24.8 226 210-450 4-251 (255)
30 KOG1189 Global transcriptional 100.0 3.2E-34 6.9E-39 295.3 19.9 367 86-479 9-405 (960)
31 PRK08671 methionine aminopepti 100.0 2.6E-33 5.6E-38 277.1 25.5 180 216-416 1-189 (291)
32 TIGR00501 met_pdase_II methion 100.0 1.3E-32 2.9E-37 272.2 24.6 181 214-415 2-191 (295)
33 PTZ00053 methionine aminopepti 100.0 2E-32 4.3E-37 280.7 26.4 196 209-416 150-360 (470)
34 cd01088 MetAP2 Methionine Amin 100.0 5.9E-32 1.3E-36 267.4 23.8 178 217-415 1-187 (291)
35 TIGR00495 crvDNA_42K 42K curve 100.0 1.7E-31 3.7E-36 272.4 26.2 192 209-417 11-233 (389)
36 COG5406 Nucleosome binding fac 99.9 2.9E-25 6.3E-30 225.0 15.0 384 52-466 6-432 (1001)
37 PF05195 AMP_N: Aminopeptidase 99.9 2.1E-22 4.4E-27 176.1 4.1 126 52-177 1-128 (134)
38 KOG2775 Metallopeptidase [Gene 99.1 1.5E-09 3.2E-14 103.1 14.4 189 214-413 82-284 (397)
39 PF01321 Creatinase_N: Creatin 99.1 5.6E-11 1.2E-15 103.3 4.4 127 60-211 1-132 (132)
40 KOG2776 Metallopeptidase [Gene 99.0 7.4E-09 1.6E-13 100.9 14.1 147 210-359 14-179 (398)
41 PF14826 FACT-Spt16_Nlob: FACT 98.2 2.6E-06 5.7E-11 76.8 5.2 144 52-204 1-162 (163)
42 PLN03158 methionine aminopepti 97.2 0.0031 6.7E-08 65.1 11.3 120 303-442 126-247 (396)
43 cd01086 MetAP1 Methionine Amin 97.1 0.0097 2.1E-07 57.1 13.0 103 320-442 2-105 (238)
44 PRK05716 methionine aminopepti 96.6 0.019 4.1E-07 55.6 11.3 103 320-442 12-115 (252)
45 cd01088 MetAP2 Methionine Amin 96.6 0.027 5.9E-07 56.0 12.1 99 320-442 2-100 (291)
46 PRK12896 methionine aminopepti 96.1 0.062 1.3E-06 52.1 11.6 111 309-442 5-120 (255)
47 COG0024 Map Methionine aminope 96.1 0.052 1.1E-06 52.4 10.7 88 320-420 12-104 (255)
48 TIGR00501 met_pdase_II methion 95.7 0.18 3.8E-06 50.3 12.6 98 321-442 7-104 (295)
49 KOG2738 Putative methionine am 95.6 0.073 1.6E-06 51.6 9.3 102 320-442 123-226 (369)
50 PRK08671 methionine aminopepti 95.4 0.28 6.2E-06 48.7 13.1 97 321-441 4-100 (291)
51 TIGR00495 crvDNA_42K 42K curve 95.4 0.21 4.6E-06 51.6 12.5 108 321-443 21-131 (389)
52 PTZ00053 methionine aminopepti 94.9 0.44 9.6E-06 50.2 13.3 105 318-441 153-262 (470)
53 cd01089 PA2G4-like Related to 94.8 0.44 9.6E-06 45.4 12.0 107 321-443 3-113 (228)
54 cd01092 APP-like Similar to Pr 94.1 0.81 1.8E-05 42.5 12.0 97 321-442 3-100 (208)
55 cd01066 APP_MetAP A family inc 93.8 0.79 1.7E-05 42.1 11.3 95 218-314 102-202 (207)
56 PF00557 Peptidase_M24: Metall 93.7 0.9 2E-05 42.3 11.4 98 320-441 1-99 (207)
57 TIGR00500 met_pdase_I methioni 93.3 1.1 2.4E-05 43.1 11.7 101 322-442 12-113 (247)
58 PRK12897 methionine aminopepti 93.2 1.5 3.3E-05 42.3 12.5 102 322-442 13-114 (248)
59 cd01087 Prolidase Prolidase. E 92.1 2.4 5.3E-05 40.6 12.3 96 321-441 3-98 (243)
60 KOG2775 Metallopeptidase [Gene 91.7 1 2.2E-05 44.0 8.7 86 321-419 87-177 (397)
61 cd01090 Creatinase Creatine am 91.6 1.9 4.2E-05 41.1 10.8 92 220-314 111-218 (228)
62 PRK12318 methionine aminopepti 90.6 4.9 0.00011 39.9 12.9 102 322-442 52-155 (291)
63 PRK07281 methionine aminopepti 90.4 5 0.00011 39.7 12.6 111 322-441 13-144 (286)
64 cd01091 CDC68-like Related to 88.3 3.6 7.7E-05 39.7 9.7 96 219-314 120-232 (243)
65 KOG2776 Metallopeptidase [Gene 88.1 3.6 7.9E-05 41.2 9.5 104 322-443 24-133 (398)
66 cd01085 APP X-Prolyl Aminopept 86.4 5.8 0.00013 37.7 9.9 102 320-442 4-108 (224)
67 TIGR02993 ectoine_eutD ectoine 82.9 12 0.00026 38.7 11.1 95 219-314 271-372 (391)
68 PRK09795 aminopeptidase; Provi 82.8 8.2 0.00018 39.5 9.8 99 213-314 235-340 (361)
69 KOG2413 Xaa-Pro aminopeptidase 80.5 3 6.4E-05 44.7 5.5 115 60-191 11-130 (606)
70 PRK15173 peptidase; Provisiona 79.8 18 0.00038 36.5 10.8 94 219-314 203-304 (323)
71 PRK14575 putative peptidase; P 77.3 37 0.00079 35.4 12.6 94 323-442 188-282 (406)
72 PRK14576 putative endopeptidas 77.1 23 0.0005 36.9 11.0 95 219-314 285-386 (405)
73 PRK10879 proline aminopeptidas 77.0 44 0.00096 35.2 13.2 93 323-440 183-276 (438)
74 COG0006 PepP Xaa-Pro aminopept 75.4 27 0.00059 35.9 11.0 93 220-314 264-365 (384)
75 PF09851 SHOCT: Short C-termin 34.9 34 0.00073 21.6 1.9 18 44-65 13-30 (31)
76 PF07305 DUF1454: Protein of u 32.4 2.6E+02 0.0056 25.8 7.8 40 320-359 115-154 (200)
77 PRK13607 proline dipeptidase; 28.9 2.9E+02 0.0064 29.1 9.0 40 222-261 272-315 (443)
78 PF02569 Pantoate_ligase: Pant 25.2 1.7E+02 0.0036 28.9 5.8 89 317-440 191-280 (280)
79 PF09818 ABC_ATPase: Predicted 24.2 8.7E+02 0.019 25.7 11.3 20 61-80 180-199 (448)
80 COG5406 Nucleosome binding fac 22.2 2.5E+02 0.0055 30.8 6.7 81 214-298 298-384 (1001)
81 PF08774 VRR_NUC: VRR-NUC doma 21.2 4.3E+02 0.0094 21.1 7.3 18 242-259 1-18 (100)
No 1
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-109 Score=799.62 Aligned_cols=439 Identities=46% Similarity=0.824 Sum_probs=405.1
Q ss_pred ccccCCCCCCCCccCccCCCCCCCCCHHHHHHHHHHHHHhCCCCcEEEEecCCcccccCCCCCCCCCCCceEEEeCCCCC
Q 011536 28 FVDSGQPTPASHPQLMKEGEITPGISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQP 107 (483)
Q Consensus 28 ~~~~~~p~~~~~p~~~~~~~~tpgis~~ey~~R~~rL~~~m~~~~l~il~~~~~~~~~~d~~y~f~q~~n~~YLtG~~~p 107 (483)
....|||++.|||||++|||+||||++.||+.||.||++.++++.++|+.+++++|++|++||.|||++||+|||||.+|
T Consensus 38 ~~~~GQpt~~thPhli~pgEltPgis~~Ey~~RR~rl~~ll~~~a~~il~sap~~~msg~ipY~f~Qd~df~YLtGc~EP 117 (488)
T KOG2414|consen 38 KGNLGQPTSVTHPHLIQPGELTPGISATEYKERRSRLMSLLPANAMVILGSAPVKYMSGAIPYTFRQDNDFYYLTGCLEP 117 (488)
T ss_pred ccccCCCCCCCCccccCCCCcCCCccHHHHHHHHHHHHHhCCcccEEEEccCchhhhcCccceeeecCCCeEEEeccCCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEcC----CcEEEEecCCCcccccccCcccccccccccccCccccchhhHHhHHHHhhccCCceEecCccch--h
Q 011536 108 GGVAVLSHE----CGLCMFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAV--Q 181 (483)
Q Consensus 108 ~~~lvi~~~----~~~~l~v~~~~~~~~~w~g~~~~~~~~~~~~~~d~~~~~~~~~~~L~~~~~~~~~I~~d~~~~~--~ 181 (483)
++++++.+. ....||+|++++..+.|+|+|++.+++..+|++|+..+.+.+..+|.++......|+.|..... +
T Consensus 118 ~~vl~l~~~d~~s~~~~lf~p~kdP~~e~WeG~rtG~~~a~~if~v~ea~~~s~l~~~L~k~~~~~~~i~~d~~ss~a~s 197 (488)
T KOG2414|consen 118 DAVLLLLKGDERSVAYDLFMPPKDPTAELWEGPRTGTDGASEIFGVDEAYPLSGLAVFLPKMSALLYKIWQDKASSKASS 197 (488)
T ss_pred CeeEEEeecccccceeeEecCCCCccHHhhcCccccchhhhhhhcchhhcchhhHHHHHHHHHhhhhhhhhhhccchhhh
Confidence 999999741 2479999999999999999999999999999999999999999999988765667887754321 1
Q ss_pred hhhhHHHHHHhcc-CCceeehHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCC
Q 011536 182 TYTNLEAFQKADF-YGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGA 260 (483)
Q Consensus 182 ~~~~~~~l~~~l~-~~~~~d~~~~i~~lR~vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~ 260 (483)
.....+.|..... ..+++++..+++++|.||||+|++.||+||.|+++++...|-..|++..|..|.+.++|+|+.+||
T Consensus 198 ~~~~~~dl~~~~~~~~~~~~~~~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rGa 277 (488)
T KOG2414|consen 198 ALKNMQDLLGFQSKSSTVRPVSNLIERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRGA 277 (488)
T ss_pred HHHHHHhhhhhcccCcccccHHHHHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecCc
Confidence 2222233332222 235899999999999999999999999999999999999998889999999999999999999999
Q ss_pred CCCCCccEEEeCCCCCcccccCCCcccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 011536 261 QRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELC 340 (483)
Q Consensus 261 ~~~~~~~iVasG~na~~~h~~~~~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~ 340 (483)
+..+|+||||+|.|+.++||+.||+.++++|+|++|+||+++||+||||||||++|+||+.|+++|++++++|+.||..|
T Consensus 278 d~~AYpPVVAgG~na~tIHY~~Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c 357 (488)
T KOG2414|consen 278 DRLAYPPVVAGGKNANTIHYVRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYC 357 (488)
T ss_pred cccccCCeeecCcccceEEEeecccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC--CCChHHHHHHHHHHHHHHHHhcCcccCCCCC--CCCCCCCcceeEeccCCcccCCCCCCCCCcCCCCEEEecceee
Q 011536 341 MP--GTSLLQIHHYSVGMLRKGLKEIGIVNSDGTD--PYNELNPTSIGHYLGMDVHDSSVVTYERPLEPGVVITIEPGIY 416 (483)
Q Consensus 341 rp--G~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~--~~~~~~~h~~GH~iGl~~he~p~~~~~~~L~~Gmv~tiEPgiy 416 (483)
+| |.++++||..+...|.++|++.|+.....+. ...+++|||+||++||||||.|.++++.+|+||||||||||+|
T Consensus 358 ~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLGmDVHD~p~v~r~~pL~pg~ViTIEPGvY 437 (488)
T KOG2414|consen 358 KPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMIQAEKLCPHHVGHYLGMDVHDCPTVSRDIPLQPGMVITIEPGVY 437 (488)
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHHhhhhcCCcccchhcCcccccCCCCCCCccCCCCceEEecCcee
Confidence 99 9999999999999999999999987654321 2468999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCccceeeEEEeEEEEEcCCCeeeCCCCCCCCHHHHHHHHcCC
Q 011536 417 IPLSFSGPERFRGIGIRIEDEVLITETGYEVLTGSLPKEIKHIESLLNNF 466 (483)
Q Consensus 417 ~p~~~~~~~~~~g~GvriED~vlVte~G~e~LT~~~p~e~~~Ie~~~~~~ 466 (483)
+|.++.||++|||+|+||||+|+|+|+|+++||..+|||+.+||.+|++.
T Consensus 438 IP~d~d~P~~FrGIGiRIEDDV~i~edg~evLT~a~pKei~~ie~l~~~~ 487 (488)
T KOG2414|consen 438 IPEDDDPPEEFRGIGIRIEDDVAIGEDGPEVLTAACPKEIIEIERLMKQA 487 (488)
T ss_pred cCccCCCchHhcCceEEeecceEeccCCceeehhcccCCHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999864
No 2
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=3.6e-86 Score=688.10 Aligned_cols=414 Identities=35% Similarity=0.625 Sum_probs=375.5
Q ss_pred CCHHHHHHHHHHHHHhCCCCcEEEEecCCcccccCCCCCCCCCCCceEEEeCCCCCCeEEEEEcCC----cEEEEecCCC
Q 011536 52 ISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHEC----GLCMFMPETS 127 (483)
Q Consensus 52 is~~ey~~R~~rL~~~m~~~~l~il~~~~~~~~~~d~~y~f~q~~n~~YLtG~~~p~~~lvi~~~~----~~~l~v~~~~ 127 (483)
++.++|.+||++|.+.|++++++|+.+++..++++|++|+|||++||+||||+++|++++|+.+++ ..+||+|++|
T Consensus 1 ~~~~~~~~rR~~l~~~~~~~~~~v~~~~~~~~~~~d~~y~Frq~s~F~YltG~~ep~~~lv~~~~~~~~~~~~Lf~~~~d 80 (438)
T PRK10879 1 MTQQEFQRRRQALLAKMQPGSAALIFAAPEATRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRD 80 (438)
T ss_pred CChHHHHHHHHHHHhhCCCCcEEEEeCCCccccCCCCCCCccCCCceeeeeCCCCCCeEEEEecCCCCCCeEEEEeCCCC
Confidence 457899999999999999999999999999999999999999999999999999999999986532 4799999999
Q ss_pred cccccccCcccccccccccccCccccchhhHHhHHHHhhccCCceEecCccc----hhhhhhHHHHHHhc-----cCCce
Q 011536 128 AHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETA----VQTYTNLEAFQKAD-----FYGAV 198 (483)
Q Consensus 128 ~~~~~w~g~~~~~~~~~~~~~~d~~~~~~~~~~~L~~~~~~~~~I~~d~~~~----~~~~~~~~~l~~~l-----~~~~~ 198 (483)
+..++|.|++.+.+.+...+++|++.+++++.+.|.+++.+...++.+.... ......++.+.... +...+
T Consensus 81 ~~~e~W~G~~~~~~~a~~~~g~d~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (438)
T PRK10879 81 LTAEIWFGRRLGQDAAPEKLGVDRALPFSEINQQLYQLLNGLDVVYHAQGEYAYADEIVFSALEKLRKGSRQNLTAPATL 160 (438)
T ss_pred CCccEEcCcCCCHHHHHHHhCCCEEeeHHHHHHHHHHHhcCCceEEecCCccccchhHHHHHHHHHHhhhccccCCcccc
Confidence 9999999999999999999999999999999999999877666777665431 11122233333221 23468
Q ss_pred eehHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCccEEEeCCCCCcc
Q 011536 199 RNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVI 278 (483)
Q Consensus 199 ~d~~~~i~~lR~vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~iVasG~na~~~ 278 (483)
+|+.+++.++|+|||++||+.||+|+++++.++.++++.++||+||.||++.+++.+.++|+..++|+++|++|.|++++
T Consensus 161 ~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~~~~~~iv~~G~na~~~ 240 (438)
T PRK10879 161 TDWRPWVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARYPSYNTIVGSGENGCIL 240 (438)
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCcEEEEcCccccc
Confidence 89999999999999999999999999999999999999999999999999999999999999988999999999999999
Q ss_pred cccCCCcccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHH
Q 011536 279 HYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLR 358 (483)
Q Consensus 279 h~~~~~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~ 358 (483)
||.++++.|++||+|++|+|++|+||++|+||||+|+|+||++|+++|++++++|+++++++|||+++++|+.++.+.+.
T Consensus 241 H~~~~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~ 320 (438)
T PRK10879 241 HYTENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMV 320 (438)
T ss_pred cCCCCccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999989999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcccCCC-----CCCCCCCCCcceeEeccCCcccCCCCC--CCCCcCCCCEEEecceeeeCCCCCCCCccceee
Q 011536 359 KGLKEIGIVNSDG-----TDPYNELNPTSIGHYLGMDVHDSSVVT--YERPLEPGVVITIEPGIYIPLSFSGPERFRGIG 431 (483)
Q Consensus 359 ~~l~~~G~~~~~~-----~~~~~~~~~h~~GH~iGl~~he~p~~~--~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~G 431 (483)
+.|.++|+..... ..++..+|+|++||+|||++||.|.+. ++.+|++|||||||||+|++....+|++|+|+|
T Consensus 321 ~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~G 400 (438)
T PRK10879 321 SGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIG 400 (438)
T ss_pred HHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCCcCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccE
Confidence 9999999965321 115788999999999999999999875 468999999999999999998778999999999
Q ss_pred EEEeEEEEEcCCCeeeCCCCCCCCHHHHHHHHcC
Q 011536 432 IRIEDEVLITETGYEVLTGSLPKEIKHIESLLNN 465 (483)
Q Consensus 432 vriED~vlVte~G~e~LT~~~p~e~~~Ie~~~~~ 465 (483)
+||||+|+||++|+|+||..+||++.+||++|++
T Consensus 401 iRiED~VlVT~~G~e~LT~~~pk~~~~iE~~m~~ 434 (438)
T PRK10879 401 IRIEDDIVITETGNENLTASVVKKPDEIEALMAA 434 (438)
T ss_pred EEeccEEEECCCcCeEcCccCCCCHHHHHHHHHh
Confidence 9999999999999999998899999999999965
No 3
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-67 Score=539.13 Aligned_cols=369 Identities=32% Similarity=0.494 Sum_probs=315.3
Q ss_pred CCCHHHHHHHHHHHHHhCCCCcEEEEecCCcccccCCCCCCCCCCCceEEEeCCCCC----CeEEEEEcCCcEEEEecCC
Q 011536 51 GISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQP----GGVAVLSHECGLCMFMPET 126 (483)
Q Consensus 51 gis~~ey~~R~~rL~~~m~~~~l~il~~~~~~~~~~d~~y~f~q~~n~~YLtG~~~p----~~~lvi~~~~~~~l~v~~~ 126 (483)
.++..++..|+.+++..|.+++++.++ +.++.|++||||+... ...+++..++.++||++..
T Consensus 4 ~~~~~~~~~rl~~~~~~~~~~~~~~~~--------------~~~~~n~~yltg~~~~~~~~~~~~~~~~~~~~~l~~~~~ 69 (384)
T COG0006 4 RFADEEYRARLARLRELMEEAGLDALL--------------LTSPSNFYYLTGFDAFGFERLQALLVPAEGEPVLFVRGR 69 (384)
T ss_pred ccchHHHHHHHHHHHHHHHHcCCcEEE--------------ecCCCceEEEeCCCCCcccceEEEEEcCCCceEEEEcch
Confidence 345678999999999999999995444 2468999999999852 2345666677799999998
Q ss_pred CcccccccCcccccccccccccCcccc--chhhHHhHHHHhhccCCceEecCccchhhhhhHHHHHHhccCCceeehHHH
Q 011536 127 SAHDVIWKGQIAGVDAAPETFKADKAY--PMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNLSRL 204 (483)
Q Consensus 127 ~~~~~~w~g~~~~~~~~~~~~~~d~~~--~~~~~~~~L~~~~~~~~~I~~d~~~~~~~~~~~~~l~~~l~~~~~~d~~~~ 204 (483)
+.....|...... .. ...+..+... +.+.+.+.+.+.......++++......+...+..+...++..++++++++
T Consensus 70 ~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 147 (384)
T COG0006 70 DEEAAKETSWIKL-EN-VEVYEDDEDPAAPLDLLGALLEELGLAGKRIGIESASIFLTLAAFERLQAALPRAELVDASDL 147 (384)
T ss_pred hHHHHHhhccccc-Cc-eEEEecCCccccHHHHHHHHHHhccccccceEEEeccCccCHHHHHHHHhhCCCCEEeccHHH
Confidence 8666555443211 11 1112111111 334566666665444667888776544667777888888887789999999
Q ss_pred HHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCccEEEeCCCCCcccccCCC
Q 011536 205 THELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRND 284 (483)
Q Consensus 205 i~~lR~vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~iVasG~na~~~h~~~~~ 284 (483)
+.++|+|||+.||+.||+|+++++.++.++++.++||+||.||++++++.+++.|++.++|.+||++|+|++.+||.+++
T Consensus 148 i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~~~~sf~~iv~~G~n~a~pH~~~~~ 227 (384)
T COG0006 148 VDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEGPSFDTIVASGENAALPHYTPSD 227 (384)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCccCcCcEEeccccccCcCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhc
Q 011536 285 QKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEI 364 (483)
Q Consensus 285 ~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~ 364 (483)
+.+++||+|++|+|+.|+|||||+||||++ |+||++|+++|+.|+++|+++++++|||+++.+|+.++++.|++.
T Consensus 228 ~~~~~gd~vliD~G~~~~gY~sDiTRT~~~-G~~~~~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~---- 302 (384)
T COG0006 228 RKLRDGDLVLIDLGGVYNGYCSDITRTFPI-GKPSDEQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKA---- 302 (384)
T ss_pred ccccCCCEEEEEeeeEECCccccceeEEec-CCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhc----
Confidence 999999999999999999999999999998 899999999999999999999999999999999999999999874
Q ss_pred CcccCCCCCCCCCCCCcceeEecc--CCcccCCC-CC--CCCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEE
Q 011536 365 GIVNSDGTDPYNELNPTSIGHYLG--MDVHDSSV-VT--YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVL 439 (483)
Q Consensus 365 G~~~~~~~~~~~~~~~h~~GH~iG--l~~he~p~-~~--~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vl 439 (483)
++..+|.|++||++| +++||.|. +. +..+|+||||||+|||+|+|+. +||||||+|+
T Consensus 303 ---------g~~~~~~h~~GHgvG~~l~vhE~p~~~~~~~~~~L~~GMv~t~Epg~y~~g~---------~GirIEd~vl 364 (384)
T COG0006 303 ---------GYGLYFLHGTGHGVGFVLDVHEHPQYLSPGSDTTLEPGMVFSIEPGIYIPGG---------GGVRIEDTVL 364 (384)
T ss_pred ---------CCcccccCCccccCCCCcccCcCccccCCCCCccccCCcEEEeccccccCCC---------ceEEEEEEEE
Confidence 567889999999999 99999994 54 6899999999999999999998 8999999999
Q ss_pred EcCCCeeeCCCCCCCCHHHH
Q 011536 440 ITETGYEVLTGSLPKEIKHI 459 (483)
Q Consensus 440 Vte~G~e~LT~~~p~e~~~I 459 (483)
||++|+|+|| ..|+++..+
T Consensus 365 Vte~G~e~LT-~~~~~~~~~ 383 (384)
T COG0006 365 VTEDGFEVLT-RVPKELLVI 383 (384)
T ss_pred EcCCCceecc-cCCcceeec
Confidence 9999999999 599987654
No 4
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=5.7e-66 Score=535.36 Aligned_cols=380 Identities=22% Similarity=0.303 Sum_probs=289.5
Q ss_pred HHHHHHHHHHHhCCCCcEEEEecC-CcccccCCCCCCCCCCCceEEEeCCC-CCCeEEEEEcC-C-cEEEEecCCCcccc
Q 011536 56 EYISRRKRLLEILPENSVAILAAA-PEKMMTDVVPYPYRQDANYLYITGCQ-QPGGVAVLSHE-C-GLCMFMPETSAHDV 131 (483)
Q Consensus 56 ey~~R~~rL~~~m~~~~l~il~~~-~~~~~~~d~~y~f~q~~n~~YLtG~~-~p~~~lvi~~~-~-~~~l~v~~~~~~~~ 131 (483)
.|.+|++++.+.... +..++.++ +.....+|..|+|||+++|+||||+. +|++++++..+ + ..+||.| .|
T Consensus 14 ~~~~r~~~~~~~~~~-~~i~l~~g~~~~~~~~D~~~~Frq~s~F~yl~G~~~~p~~~~~i~~~~~~~~~l~~~-~d---- 87 (443)
T PRK13607 14 TLQQRTRDALAREGL-DALLIHSGELHRVFLDDHDYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYQP-VD---- 87 (443)
T ss_pred HHHHHHHHHHhccCC-CEEEEECCCcccccCCCCCCCcCcCCCcchhcCCCCCCCeEEEEEeCCCCEEEEEec-Cc----
Confidence 455555444443332 33455555 44455789999999999999999996 79999999754 3 4555654 43
Q ss_pred cccCccccccc-ccccccCccccchhhHHhHHHHhhccCCceEecCccchhhhhhHHHHHHhccCCceeehHHHHHHhhc
Q 011536 132 IWKGQIAGVDA-APETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNLSRLTHELRW 210 (483)
Q Consensus 132 ~w~g~~~~~~~-~~~~~~~d~~~~~~~~~~~L~~~~~~~~~I~~d~~~~~~~~~~~~~l~~~l~~~~~~d~~~~i~~lR~ 210 (483)
.|.+.....+. ..+.++.+.....+.+...|... +....++..... .. ..+.-..+..+..++.+.|.++|+
T Consensus 88 ~W~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~l~~~l~~lR~ 160 (443)
T PRK13607 88 YWHNVEPLPESFWTEEVDIKALTKADGIASLLPAD--RGNVAYIGEVPE--RA---LALGFEASNINPKGVLDYLHYHRA 160 (443)
T ss_pred cccCCCCCchHHHHHhcChHhcccHHHHHHhhccC--CCceEEeccccc--cc---ccccCcccccChHHHHHHHHHHHh
Confidence 69987643333 24445555555555555554431 122222211100 00 000000112356678999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCccEEEeCCCCCcccccCCCc-ccCC
Q 011536 211 VKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQ-KIDD 289 (483)
Q Consensus 211 vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~iVasG~na~~~h~~~~~~-~l~~ 289 (483)
|||++||+.||+|++++++++.++++.++||+||.||++.+...+ ..|+...+|++||++|.|++++||.++++ .+++
T Consensus 161 iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~-~~~~~~~~y~~iva~G~naa~~H~~~~~~~~~~~ 239 (443)
T PRK13607 161 YKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTAT-GQRDNDVPYGNIVALNEHAAVLHYTKLDHQAPAE 239 (443)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh-CCCCcCCCCCcEEEecCcceEecCCccCCCCCCC
Confidence 999999999999999999999999999999999999998776543 44566679999999999999999999985 6899
Q ss_pred CCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccC
Q 011536 290 GDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNS 369 (483)
Q Consensus 290 Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~ 369 (483)
||+|++|+|+.|+||+||+||||+ |+++++++++|++++++|+++++++|||+++.|||.++++.+.+.|.++|+...
T Consensus 240 Gd~vliD~Ga~~~GY~sDiTRTf~--g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~~g 317 (443)
T PRK13607 240 MRSFLIDAGAEYNGYAADITRTYA--AKEDNDFAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIVTG 317 (443)
T ss_pred CCEEEEEeeEEECCEEecceEEEe--cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999997 678999999999999999999999999999999999999999999999999852
Q ss_pred -CC----CCCC-CCCCCcceeEeccCCcccCCCC------------------CCCCCcCCCCEEEecceeeeCCC-----
Q 011536 370 -DG----TDPY-NELNPTSIGHYLGMDVHDSSVV------------------TYERPLEPGVVITIEPGIYIPLS----- 420 (483)
Q Consensus 370 -~~----~~~~-~~~~~h~~GH~iGl~~he~p~~------------------~~~~~L~~Gmv~tiEPgiy~p~~----- 420 (483)
.. +.++ ..+|+|++||+|||++||.+.+ ....+|++|||||||||+|+++.
T Consensus 318 ~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY~~~~ll~~~ 397 (443)
T PRK13607 318 LSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAGFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPGLYFIDSLLAPL 397 (443)
T ss_pred CCHHHHHhCCCceEecCCCccCccCcccccCCCcccccccccccccccccccccCCcCCCCcEEEECCeeeeChhhhchh
Confidence 10 0133 4689999999999999998543 34589999999999999999851
Q ss_pred ----------CCCCCcccee-eEEEeEEEEEcCCCeeeCCCC
Q 011536 421 ----------FSGPERFRGI-GIRIEDEVLITETGYEVLTGS 451 (483)
Q Consensus 421 ----------~~~~~~~~g~-GvriED~vlVte~G~e~LT~~ 451 (483)
+...++|+++ ||||||+|+||++|+++||..
T Consensus 398 ~~~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~G~e~Lt~~ 439 (443)
T PRK13607 398 REGPFSKHFNWQKIDALKPFGGIRIEDNVVVHENGVENMTRD 439 (443)
T ss_pred hhhhhhhhccHHHHHhhcCCCEEeecceEEEcCCCCeECChh
Confidence 0112345554 999999999999999999974
No 5
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=4e-65 Score=524.90 Aligned_cols=364 Identities=19% Similarity=0.241 Sum_probs=299.1
Q ss_pred CCCHHHHHHHHHHHHHhCCCCcEE-EEecCCcccccCCCCCCCCCCCceEEEeCCCCCC----eEEEEEcCCcEEEEecC
Q 011536 51 GISAEEYISRRKRLLEILPENSVA-ILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPG----GVAVLSHECGLCMFMPE 125 (483)
Q Consensus 51 gis~~ey~~R~~rL~~~m~~~~l~-il~~~~~~~~~~d~~y~f~q~~n~~YLtG~~~p~----~~lvi~~~~~~~l~v~~ 125 (483)
.||.+||++|++||++.|++++++ +|+. .+.|++|||||.... .+++|+.++.++++++.
T Consensus 5 ~f~~~E~~~Rl~rl~~~m~~~~lDalli~---------------~~~ni~YltG~~~~~~~~~~~l~v~~~~~~~l~~~~ 69 (391)
T TIGR02993 5 FFTRAEYQARLDKTRAAMEARGIDLLIVT---------------DPSNMAWLTGYDGWSFYVHQCVLLPPEGEPIWYGRG 69 (391)
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEEc---------------CcccceeeccCCCCceEEEEEEEEcCCCceEEEehh
Confidence 488999999999999999999995 5554 368999999998643 35677778888888876
Q ss_pred CCccc---ccccCccccccccccc-ccCccccchhhHHhHHHHhhccCCceEecCccchhhhhhHHHHHHhccCCceeeh
Q 011536 126 TSAHD---VIWKGQIAGVDAAPET-FKADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNL 201 (483)
Q Consensus 126 ~~~~~---~~w~g~~~~~~~~~~~-~~~d~~~~~~~~~~~L~~~~~~~~~I~~d~~~~~~~~~~~~~l~~~l~~~~~~d~ 201 (483)
.+... ..|.... .+....+. .......+++.+.+.|++.....++||++.+...++...+..|.+.+++.+++|+
T Consensus 70 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~e~~~~~~~~~~~~~l~~~l~~~~~~d~ 148 (391)
T TIGR02993 70 QDANGAKRTAFMDHD-NIVGYPDHYVQSTERHPMDYLSEILQDRGWDSLTIGVEMDNYYFSAAAFASLQKHLPNARFVDA 148 (391)
T ss_pred hhhhhHhheeecccc-ceeecccccccCCCCCHHHHHHHHHHhcCCCCCcEEEecCCCccCHHHHHHHHHhCCCCEEEeh
Confidence 54321 1232110 01100010 0001123445677777766544568999876544667788889998888999999
Q ss_pred HHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHH----cCCCCCCCccEEEeCCCCCc
Q 011536 202 SRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKM----RGAQRMAFNPVVGGGPNAAV 277 (483)
Q Consensus 202 ~~~i~~lR~vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~----~G~~~~~~~~iVasG~na~~ 277 (483)
++++.++|+|||++||++||+|++|+++++.++.+.++||+||.||++.+.+.... .|++.++|.++|+||+|+..
T Consensus 149 ~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~~~~g~~~~~~~~iv~sG~~~a~ 228 (391)
T TIGR02993 149 TALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIRGVDGFGGDYPAIVPLLPSGADASA 228 (391)
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhcccCcCCCcCCcccccccCccccC
Confidence 99999999999999999999999999999999999999999999999998765432 46666788899999999999
Q ss_pred ccccCCCcccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHH
Q 011536 278 IHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGML 357 (483)
Q Consensus 278 ~h~~~~~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l 357 (483)
+|+.|++++|++||+|++|+|+.|+|||+|+||||++ |+|+++|+++|++++++|+++++++|||++++||++++++.+
T Consensus 229 pH~~~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~v-G~p~~~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~ 307 (391)
T TIGR02993 229 PHLTWDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFL-GKPTQAFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVL 307 (391)
T ss_pred CCCCCCCCcccCCCEEEEEeeeecccCccceeEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998 899999999999999999999999999999999999999988
Q ss_pred HHHHHhcCcccCCCCCCCCCCCCcceeEeccCCccc-----CCCCC--CCCCcCCCCEEEecceeeeCCCCCCCCcccee
Q 011536 358 RKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHD-----SSVVT--YERPLEPGVVITIEPGIYIPLSFSGPERFRGI 430 (483)
Q Consensus 358 ~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he-----~p~~~--~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~ 430 (483)
.+ .|+ .. .|++||+||+++|+ .|.+. ++.+|++|||||||||+|+|+ +
T Consensus 308 ~~----~G~---------~~--~h~~GhgiGl~~~~~~~e~~~~l~~~~~~~L~~GMv~tvEpgiy~~~----------~ 362 (391)
T TIGR02993 308 KK----YGI---------HK--DSRTGYPIGLSYPPDWGERTMSLRPGDNTVLKPGMTFHFMTGLWMED----------W 362 (391)
T ss_pred HH----cCC---------cc--CCCceeeeccCcCCCCCCccccccCCCCceecCCCEEEEcceeEeCC----------C
Confidence 66 443 22 48999999999874 23443 578999999999999999986 4
Q ss_pred eEEEeEEEEEcCCCeeeCCCCCCCCHH
Q 011536 431 GIRIEDEVLITETGYEVLTGSLPKEIK 457 (483)
Q Consensus 431 GvriED~vlVte~G~e~LT~~~p~e~~ 457 (483)
|+||||+|+||++|+|+||. .|+++.
T Consensus 363 Gvried~v~VT~~G~e~Lt~-~p~~l~ 388 (391)
T TIGR02993 363 GLEITESILITETGVECLSS-VPRKLF 388 (391)
T ss_pred CeEEeeEEEECCCcceeccc-CCcccE
Confidence 89999999999999999997 999984
No 6
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=100.00 E-value=8.2e-67 Score=500.29 Aligned_cols=412 Identities=28% Similarity=0.482 Sum_probs=336.9
Q ss_pred CCHHHHHHHHHHHHHhCCCC---------c--EEEEecCCccccc-CCCCCCCCCCCceEEEeCCCCCCeEEEEEc-CCc
Q 011536 52 ISAEEYISRRKRLLEILPEN---------S--VAILAAAPEKMMT-DVVPYPYRQDANYLYITGCQQPGGVAVLSH-ECG 118 (483)
Q Consensus 52 is~~ey~~R~~rL~~~m~~~---------~--l~il~~~~~~~~~-~d~~y~f~q~~n~~YLtG~~~p~~~lvi~~-~~~ 118 (483)
+|.+-+...+.|+-+.|+.+ + ++++.++..+-++ -|..+-|+|++.|+||.|..+|+++.+|.- .++
T Consensus 12 vP~~lf~~nr~rl~~~lr~k~~~~nr~~~~~s~vllqgGeE~nrYctD~~~lFrQesYF~~lfGV~ep~~yg~idv~tgK 91 (492)
T KOG2737|consen 12 VPMELFAGNRKRLLEALRKKLLSSNRSLDGGSFVLLQGGEEKNRYCTDTTELFRQESYFAYLFGVREPGFYGAIDVGTGK 91 (492)
T ss_pred ecHHHhhcchHHHHHHHHhhcccccccccCceEEEEecchhhcccccchHHHHhhhhHHHHhhcCCCccceEEEEecCCc
Confidence 44666666665555544322 2 4677777554444 478888999999999999999999888765 457
Q ss_pred EEEEecCCCcccccccCcccccccccccccCccccchhhHHhHHHHhhccCCceEec----Ccc-chhhhhhHHHHHHhc
Q 011536 119 LCMFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHN----QET-AVQTYTNLEAFQKAD 193 (483)
Q Consensus 119 ~~l~v~~~~~~~~~w~g~~~~~~~~~~~~~~d~~~~~~~~~~~L~~~~~~~~~I~~d----~~~-~~~~~~~~~~l~~~l 193 (483)
.+||+|..+.....|.|...+.+.+++.+.+|++.-.+++...++.. +.+.++.- .++ +...-..+.... .+
T Consensus 92 stLFvPrlp~~ya~W~G~i~~l~~fke~y~VDev~yvde~~~~~~~~--~~k~l~~l~g~nTDsg~v~~e~~f~g~~-kf 168 (492)
T KOG2737|consen 92 STLFVPRLPDSYATWMGEILSLQHFKEKYAVDEVFYVDEIIQVLKGS--KPKLLYLLRGLNTDSGNVLKEASFAGIS-KF 168 (492)
T ss_pred eEEEecCCChhhceeccccCCHHHHHHHhhhhheeehHhHHHHhhcc--CccceeeeeccccCcccccCcccccchh-hc
Confidence 99999999999999999999999999999999988888888877543 23333311 111 001111111111 11
Q ss_pred cCCceeehHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHc-CCCCCCCccEEEeC
Q 011536 194 FYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMR-GAQRMAFNPVVGGG 272 (483)
Q Consensus 194 ~~~~~~d~~~~i~~lR~vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~-G~~~~~~~~iVasG 272 (483)
+ ....-+.+.+.+.|.|||+.||+.||.|++|++.|+.++|+.++||+.|.++.+.+++..... ||...+|.+|.+||
T Consensus 169 ~-~D~~~lyp~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh~sYtcIc~sG 247 (492)
T KOG2737|consen 169 E-TDLTLLYPILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRHLSYTCICASG 247 (492)
T ss_pred c-cCchhhhHHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccccccceeeecC
Confidence 1 123345788999999999999999999999999999999999999999999999999887765 56889999999999
Q ss_pred CCCCcccc----cCCCcccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHH
Q 011536 273 PNAAVIHY----SRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQ 348 (483)
Q Consensus 273 ~na~~~h~----~~~~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~ 348 (483)
+|++++|| .|||+.+++||++++|+|++|.+|.||||++||++|+||++||.+|++|++++.++++.+|||+.+.|
T Consensus 248 ~ns~vLHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~W~D 327 (492)
T KOG2737|consen 248 DNSAVLHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVWWVD 327 (492)
T ss_pred CCcceeeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCcccc
Confidence 99999999 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCcccCCCCC----C-CCCCCCcceeEeccCCcccCCCCC---------------CCCCcCCCCE
Q 011536 349 IHHYSVGMLRKGLKEIGIVNSDGTD----P-YNELNPTSIGHYLGMDVHDSSVVT---------------YERPLEPGVV 408 (483)
Q Consensus 349 i~~~~~~~l~~~l~~~G~~~~~~~~----~-~~~~~~h~~GH~iGl~~he~p~~~---------------~~~~L~~Gmv 408 (483)
+|..+.+++-+.+++.|+.....+. . -..++||++||.+|||+||...++ -.+.|++|||
T Consensus 328 mh~La~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~Mv 407 (492)
T KOG2737|consen 328 MHKLAEKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGMV 407 (492)
T ss_pred HHHHHHHHHHHHHHhcCceeccHHHHHHhccCeeeccccccccccccccccCCCCCCCCCCCcchhhhhhhhhhhhcCcE
Confidence 9999999999999999997654332 1 246899999999999999976543 1468999999
Q ss_pred EEecceeeeCCC-----------C-----CCCCcccee-eEEEeEEEEEcCCCeeeCCCCCCCCHHHHHHHHcCCCC
Q 011536 409 ITIEPGIYIPLS-----------F-----SGPERFRGI-GIRIEDEVLITETGYEVLTGSLPKEIKHIESLLNNFSS 468 (483)
Q Consensus 409 ~tiEPgiy~p~~-----------~-----~~~~~~~g~-GvriED~vlVte~G~e~LT~~~p~e~~~Ie~~~~~~~~ 468 (483)
+|||||+|+-+. . ..-++||++ ||||||+|+||++|+|+||. .|+++.+||+.|+.+..
T Consensus 408 iTvEPGcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~G~enlt~-vprtveeIEa~ma~g~~ 483 (492)
T KOG2737|consen 408 ITVEPGCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKSGIENLTC-VPRTVEEIEACMAGGDK 483 (492)
T ss_pred EEecCChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEeccccccccC-CCCCHHHHHHHHhcCCC
Confidence 999999997441 0 113577888 79999999999999999997 99999999999987543
No 7
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=1.4e-64 Score=516.65 Aligned_cols=346 Identities=24% Similarity=0.377 Sum_probs=283.3
Q ss_pred HHHHHHHHhCCCCcEE-EEecCCcccccCCCCCCCCCCCceEEEeCCCCCCeEEEEEcCCcEEEEecCCCcccccccCcc
Q 011536 59 SRRKRLLEILPENSVA-ILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHECGLCMFMPETSAHDVIWKGQI 137 (483)
Q Consensus 59 ~R~~rL~~~m~~~~l~-il~~~~~~~~~~d~~y~f~q~~n~~YLtG~~~p~~~lvi~~~~~~~l~v~~~~~~~~~w~g~~ 137 (483)
+|+++|++.|++++++ +++. .+.|++|||||....++++|+.++. +||++..... .+....
T Consensus 2 ~Rl~~l~~~m~~~~lDa~lI~---------------~~~n~~YLTGf~g~~g~llIt~~~~-~l~td~ry~~--qa~~~~ 63 (361)
T PRK09795 2 TLLASLRDWLKAQQLDAVLLS---------------SRQNKQPHLGISTGSGYVVISRESA-HILVDSRYYA--DVEARA 63 (361)
T ss_pred cHHHHHHHHHHHCCCCEEEEC---------------CccccccccCccCCCeEEEEECCCC-EEEcCcchHH--HHHhhC
Confidence 5899999999999995 5554 2579999999998777788888754 5777654221 110000
Q ss_pred cccccccccccCccccchhhHHhHHHHhhc--cCCceEecCccchhhhhhHHHHHHhccCCceeehHHHHHHhhccCCHH
Q 011536 138 AGVDAAPETFKADKAYPMSKIQEILPDMIG--RSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNLSRLTHELRWVKSPA 215 (483)
Q Consensus 138 ~~~~~~~~~~~~d~~~~~~~~~~~L~~~~~--~~~~I~~d~~~~~~~~~~~~~l~~~l~~~~~~d~~~~i~~lR~vKs~~ 215 (483)
.+. .++..+. .+.+.+.|.+++. +.++||+|... .++..+..|.+.+ ...+++. .+..+|+|||++
T Consensus 64 ~~~----~v~~~~~---~~~~~~~L~~~L~~~~~~~Ig~e~~~--~s~~~~~~L~~~l-~~~~~~~--~~~~lR~iKs~~ 131 (361)
T PRK09795 64 QGY----QLHLLDA---TNTLTTIVNQIIADEQLQTLGFEGQQ--VSWETAHRWQSEL-NAKLVSA--TPDVLRQIKTPE 131 (361)
T ss_pred CCc----eEEEecC---CccHHHHHHHHHHhcCCcEEEEecCc--ccHHHHHHHHHhc-Ccccccc--cHHHHhcCCCHH
Confidence 011 1111011 1122333444432 23679998653 4555566666554 3445554 389999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCccEEEeCCCCCcccccCCCcccCCCCeEEE
Q 011536 216 ELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLM 295 (483)
Q Consensus 216 EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~iVasG~na~~~h~~~~~~~l~~Gd~vlv 295 (483)
||+.||+|++|+++++..+++.++||+||.||++.+++.++++|++..+|.++|++|.|++.+|+.|++++|++||+|++
T Consensus 132 Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~~~~~f~~iv~sG~~~~~ph~~~~~~~l~~gd~v~~ 211 (361)
T PRK09795 132 EVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEKASFDTIVASGWRGALPHGKASDKIVAAGEFVTL 211 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCCCcCCCCeEEEEeccccccCCCCCCceecCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccceeCCeEeeeeEeeeCCCCC-CHH---HHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCC
Q 011536 296 DVGCELHGYVSDMTRTWPPCGSF-SSL---EEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDG 371 (483)
Q Consensus 296 D~g~~~~GY~sDitRT~~v~G~~-t~~---q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~ 371 (483)
|+|+.|+|||||+||||+++|+. +++ ++++|++++++|+++++++|||++++||++++++++.+.
T Consensus 212 d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~----------- 280 (361)
T PRK09795 212 DFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEA----------- 280 (361)
T ss_pred EeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-----------
Confidence 99999999999999999995542 333 789999999999999999999999999999999999773
Q ss_pred CCCCCCCCCcceeEeccCCcccCCCCC--CCCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcCCCeeeCC
Q 011536 372 TDPYNELNPTSIGHYLGMDVHDSSVVT--YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITETGYEVLT 449 (483)
Q Consensus 372 ~~~~~~~~~h~~GH~iGl~~he~p~~~--~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte~G~e~LT 449 (483)
||..+|.|++||+||+++||.|.+. ++.+|++|||||||||+|+|+. +|+||||+|+||++|+|+||
T Consensus 281 --g~~~~~~h~~GHgiGl~~he~p~i~~~~~~~l~~gmv~~iEpgiy~~~~---------~gvriEd~v~vt~~G~e~Lt 349 (361)
T PRK09795 281 --GYGDYFGHNTGHAIGIEVHEDPRFSPRDTTTLQPGMLLTVEPGIYLPGQ---------GGVRIEDVVLVTPQGAEVLY 349 (361)
T ss_pred --CCCccCCCCCCccCCccccCCCCcCCCCCCCcCCCCEEEECCEEEeCCC---------CEEEEeeEEEECCCCcEeCc
Confidence 5678899999999999999999885 5789999999999999999987 79999999999999999999
Q ss_pred CCCCCCHH
Q 011536 450 GSLPKEIK 457 (483)
Q Consensus 450 ~~~p~e~~ 457 (483)
. .|+++.
T Consensus 350 ~-~~~~l~ 356 (361)
T PRK09795 350 A-MPKTVL 356 (361)
T ss_pred C-CCceEE
Confidence 7 899874
No 8
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=7.9e-62 Score=502.16 Aligned_cols=354 Identities=20% Similarity=0.280 Sum_probs=288.8
Q ss_pred HHHHHHHhCCCCcEE-EEecCCcccccCCCCCCCCCCCceEEEeCCCCCC---------eEEEEEcC-CcEE-EEecCCC
Q 011536 60 RRKRLLEILPENSVA-ILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPG---------GVAVLSHE-CGLC-MFMPETS 127 (483)
Q Consensus 60 R~~rL~~~m~~~~l~-il~~~~~~~~~~d~~y~f~q~~n~~YLtG~~~p~---------~~lvi~~~-~~~~-l~v~~~~ 127 (483)
-++||++.|+++|++ ++++ .++||+|||||.... +.+|++.+ +.++ +++|..+
T Consensus 12 ~~~rlr~~m~~~glD~lvl~---------------~p~n~~ylTG~~~~~~~~~r~~~~~~lvv~~~~~~p~~~i~p~~E 76 (406)
T PRK14575 12 VSRKLRTIMERDNIDAVIVT---------------TCDNFYHVTGILSFFMYTFRNTGTAIAVVFRDVKIPSLIIMNEFE 76 (406)
T ss_pred HHHHHHHHHHHcCCCEEeec---------------CcchheeecccccccceecccCCceEEEEEcCCCCCceEEechhh
Confidence 478999999999996 4443 479999999986532 33678777 4444 6776654
Q ss_pred cccccccCcccccccccccccCccccch------------------h----hHHhHHHHhhccCCceEecCccchhhhhh
Q 011536 128 AHDVIWKGQIAGVDAAPETFKADKAYPM------------------S----KIQEILPDMIGRSSKLFHNQETAVQTYTN 185 (483)
Q Consensus 128 ~~~~~w~g~~~~~~~~~~~~~~d~~~~~------------------~----~~~~~L~~~~~~~~~I~~d~~~~~~~~~~ 185 (483)
.....-+........ .. .+.|...++ + .+.+.|++.+..+++||+|... .+...
T Consensus 77 ~~~~~~~~~~~~~~~-~~-~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~igve~~~--~~~~~ 152 (406)
T PRK14575 77 AASLTLDMPNAELKT-FP-VWVDVDDPFNMRDSANNNKERPIGPPIESVCNILKDALNDARVLNKKIAIDLNI--MSNGG 152 (406)
T ss_pred hhhhccccccccccc-CC-ceEeeeccccccchhhhhhcCCCCCCHHHHHHHHHHHHHhcCCcCCEEEEccCC--CCHHH
Confidence 432100000000000 00 111111122 3 3445555544456799998763 46667
Q ss_pred HHHHHHhccCCceeehHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 011536 186 LEAFQKADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAF 265 (483)
Q Consensus 186 ~~~l~~~l~~~~~~d~~~~i~~lR~vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~ 265 (483)
+..|...+|+.+++|+++++.++|+|||++||+.||+|+++++++++++++.++||+||.||++.+++.+...|.....+
T Consensus 153 ~~~l~~~lp~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~~~ 232 (406)
T PRK14575 153 KRVIDAVMPNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHFSR 232 (406)
T ss_pred HHHHHHhCCCCeEEEcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcCCc
Confidence 78888888989999999999999999999999999999999999999999999999999999999999988888765555
Q ss_pred ccEEEeCCCCCcccccCCCcccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 011536 266 NPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTS 345 (483)
Q Consensus 266 ~~iVasG~na~~~h~~~~~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~ 345 (483)
.+++.+|.+ ..+|+.++++.+++||+|++|+|+.|+||++|+||||++ |+||++|+++|++++++++++++++|||++
T Consensus 233 ~~~v~~G~~-~~~h~~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~v-G~~~~~~~~~~~~~~~a~~~~~~~~rpG~~ 310 (406)
T PRK14575 233 FHLISVGAD-FSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVV-GEPPEITRKIYQTIRTGHEHMLSMVAPGVK 310 (406)
T ss_pred CceEEECCC-cccCCCCCCCcCCCCCEEEEEeceEECCEeeeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 578999998 468999999999999999999999999999999999999 899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEecc--CCcccCCCCC--CCCCcCCCCEEEecceeeeCCCC
Q 011536 346 LLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLG--MDVHDSSVVT--YERPLEPGVVITIEPGIYIPLSF 421 (483)
Q Consensus 346 ~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iG--l~~he~p~~~--~~~~L~~Gmv~tiEPgiy~p~~~ 421 (483)
++||++++++.+++ . |+.+++.|++|||+| +++||.|.+. ++.+|++||||+||||+|+++.
T Consensus 311 ~~dv~~a~~~~~~~----~---------G~~~~~~~~~GHGiG~~lg~~e~P~i~~~~~~~Le~GMv~tiEpgiy~~g~- 376 (406)
T PRK14575 311 MKDVFDSTMEVIKK----S---------GLPNYNRGHLGHGNGVFLGLEESPFVSTHATESFTSGMVLSLETPYYGYNL- 376 (406)
T ss_pred HHHHHHHHHHHHHH----c---------CCccccCCCCCCcccCCCCCccCCCCCCCCCCCcCCCCEEEECCeeecCCC-
Confidence 99999999998876 3 456778899999999 5899999876 5689999999999999999886
Q ss_pred CCCCccceeeEEEeEEEEEcCCCeeeCCCCCCCCHH
Q 011536 422 SGPERFRGIGIRIEDEVLITETGYEVLTGSLPKEIK 457 (483)
Q Consensus 422 ~~~~~~~g~GvriED~vlVte~G~e~LT~~~p~e~~ 457 (483)
+|+||||+|+||++|+|+||. +|+++.
T Consensus 377 --------gGvriEDtvlVT~~G~e~LT~-~p~~l~ 403 (406)
T PRK14575 377 --------GSIMIEDMILINKEGIEFLSK-LPRDLV 403 (406)
T ss_pred --------cEEEEEeEEEEcCCCcccCCC-CCcccc
Confidence 799999999999999999997 999875
No 9
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=9.4e-60 Score=486.56 Aligned_cols=357 Identities=20% Similarity=0.282 Sum_probs=286.2
Q ss_pred HHHHHHHHhCCCCcEE-EEecCCcccccCCCCCCCCCCCceEEEeCCCCC------C---eEEEEEcC-CcE-EEEecCC
Q 011536 59 SRRKRLLEILPENSVA-ILAAAPEKMMTDVVPYPYRQDANYLYITGCQQP------G---GVAVLSHE-CGL-CMFMPET 126 (483)
Q Consensus 59 ~R~~rL~~~m~~~~l~-il~~~~~~~~~~d~~y~f~q~~n~~YLtG~~~p------~---~~lvi~~~-~~~-~l~v~~~ 126 (483)
.-.+|+++.|+++|++ ++++ .+.||+|||||... . .++|++.+ +.+ .++++..
T Consensus 11 ~~~~r~r~~M~~~gldalll~---------------~p~ni~YlTG~~~~~~~~~r~~~~~v~v~~~d~~~p~~~i~~~~ 75 (405)
T PRK14576 11 AVSRKARVVMEREGIDALVVT---------------VCDNFYYLTGFASFFMYTFRHTGAAVAIMFRDANIPSQIIMNEF 75 (405)
T ss_pred HHHHHHHHHHHHcCCCEEEec---------------cccceeeeccccccceeeeccCCeEEEEecCCCCCCcEEEechh
Confidence 3578899999999996 4443 47999999999753 1 12222245 334 6677655
Q ss_pred Cccc-------------ccccCcccccccccccc--cCccccch----hhHHhHHHHhhccCCceEecCccchhhhhhHH
Q 011536 127 SAHD-------------VIWKGQIAGVDAAPETF--KADKAYPM----SKIQEILPDMIGRSSKLFHNQETAVQTYTNLE 187 (483)
Q Consensus 127 ~~~~-------------~~w~g~~~~~~~~~~~~--~~d~~~~~----~~~~~~L~~~~~~~~~I~~d~~~~~~~~~~~~ 187 (483)
+... ..|.............. ......+. +.+.+.|++++...++||+|.+. .+...+.
T Consensus 76 e~~~~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~rigve~~~--~~~~~~~ 153 (405)
T PRK14576 76 EAASTHFDMPNSVLKTFPVWVDVDDPRNPHHHYKKRDRPIGPPVEAVFSLVKNALEDAGVLDKTIAIELQA--MSNGGKG 153 (405)
T ss_pred hhhhhhccccccccccCCceEeecCCcccchhhhccccCCCCcHHHHHHHHHHHHHHhCCCCCEEEEccCC--CCHHHHH
Confidence 4322 12211000000000000 00000011 44556676666667899998753 3455566
Q ss_pred HHHHhccCCceeehHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCcc
Q 011536 188 AFQKADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNP 267 (483)
Q Consensus 188 ~l~~~l~~~~~~d~~~~i~~lR~vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~ 267 (483)
.+...+|+.+++|+++++.++|+|||++||++||+|++++++++.++++.++||+||.||++.+++.+.+.|....++.+
T Consensus 154 ~l~~~~~~~~~vd~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~~~~~ 233 (405)
T PRK14576 154 VLDKVAPGLKLVDSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPETNFSRFN 233 (405)
T ss_pred HHHhhCCCCeEEEcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcCCCCC
Confidence 77778888999999999999999999999999999999999999999999999999999999999999998865445558
Q ss_pred EEEeCCCCCcccccCCCcccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChH
Q 011536 268 VVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLL 347 (483)
Q Consensus 268 iVasG~na~~~h~~~~~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~ 347 (483)
+|++|+|+ .+|+.|+++.++.||+|++|+|+.|+||++|+||||++ |+|+++|+++|++++++++++++++|||++++
T Consensus 234 ~v~~G~~~-~~h~~~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~-G~p~~~~~~~~~~~~~a~~a~~~~~rPG~~~~ 311 (405)
T PRK14576 234 LISVGDNF-SPKIIADTTPAKVGDLIKFDCGIDVAGYGADLARTFVL-GEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLK 311 (405)
T ss_pred EEEECCcc-cCCCCCCCcccCCCCEEEEEeceeECCEEeeeeEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHH
Confidence 99999994 58999999999999999999999999999999999987 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEecc--CCcccCCCCC--CCCCcCCCCEEEecceeeeCCCCCC
Q 011536 348 QIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLG--MDVHDSSVVT--YERPLEPGVVITIEPGIYIPLSFSG 423 (483)
Q Consensus 348 ~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iG--l~~he~p~~~--~~~~L~~Gmv~tiEPgiy~p~~~~~ 423 (483)
||++++++.+.+ . |+.+++.|++||++| +.+||.|.+. ++.+|++||||+|||++|.++.
T Consensus 312 dv~~a~~~~~~~----~---------G~~~~~~~~~GHgiG~~l~~~e~P~i~~~~~~~Le~GMv~~vEp~~y~~g~--- 375 (405)
T PRK14576 312 AVFDSTMAVIKT----S---------GLPHYNRGHLGHGDGVFLGLEEVPFVSTQATETFCPGMVLSLETPYYGIGV--- 375 (405)
T ss_pred HHHHHHHHHHHH----c---------CCccccCCCCCCCCCCCCCcCcCCCcCCCCCCccCCCCEEEECCceeecCC---
Confidence 999999998876 3 456778899999999 8899999875 5789999999999999999987
Q ss_pred CCccceeeEEEeEEEEEcCCCeeeCCCCCCCCHH
Q 011536 424 PERFRGIGIRIEDEVLITETGYEVLTGSLPKEIK 457 (483)
Q Consensus 424 ~~~~~g~GvriED~vlVte~G~e~LT~~~p~e~~ 457 (483)
+|+||||+|+||++|+|+||. .|+++.
T Consensus 376 ------ggvriEDtvlVTe~G~e~LT~-~p~~l~ 402 (405)
T PRK14576 376 ------GSIMLEDMILITDSGFEFLSK-LDRDLR 402 (405)
T ss_pred ------CEEEEeeEEEECCCccccCCC-CCcccc
Confidence 799999999999999999998 899874
No 10
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=7e-56 Score=444.28 Aligned_cols=274 Identities=21% Similarity=0.309 Sum_probs=245.9
Q ss_pred hHHhHHHHhhccCCceEecCccchhhhhhHHHHHHhccCCceeehHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH
Q 011536 157 KIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTML 236 (483)
Q Consensus 157 ~~~~~L~~~~~~~~~I~~d~~~~~~~~~~~~~l~~~l~~~~~~d~~~~i~~lR~vKs~~EI~~mR~A~~i~~~a~~~~~~ 236 (483)
.+.+.|.+++...++||+|.+. .+...+..|++.+|+.+++|+++++.++|+|||++||+.||+|++++++++..+++
T Consensus 43 ~l~~~l~~~g~~~~rigve~~~--~~~~~~~~l~~~l~~~~~~d~~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~ 120 (323)
T PRK15173 43 ILKDALNDARVLNKKIAIDLNI--MSNGGKRVIDAVMPNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASK 120 (323)
T ss_pred HHHHHHHHcCccCCEEEEecCc--cCHHHHHHHHhhCCCCeEEEhHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555566799998763 46667788888889899999999999999999999999999999999999999999
Q ss_pred hcCCCCcHHHHHHHHHHHHHHcCCCCCCCccEEEeCCCCCcccccCCCcccCCCCeEEEeccceeCCeEeeeeEeeeCCC
Q 011536 237 HSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCG 316 (483)
Q Consensus 237 ~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~iVasG~na~~~h~~~~~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G 316 (483)
.++||+||.||++.+++.+.+.|.....+.+++++|.++ .+|+.++++.+++||+|++|+|+.|+||++|+||||++ |
T Consensus 121 ~i~~G~tE~el~a~~~~~~~~~g~~~~~~~~~i~~G~~~-~~h~~~~~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~v-G 198 (323)
T PRK15173 121 LIRVGCTSAELTAAYKAAVMSKSETHFSRFHLISVGADF-SPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVV-G 198 (323)
T ss_pred HccCCCCHHHHHHHHHHHHHHcCCCCCCCCcEEEECCCC-ccCCCCCCCccCCCCEEEEEeCccCCCEeeeeEEEEEc-C
Confidence 999999999999999988888877655555788899884 58999999999999999999999999999999999999 8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccC--CcccC
Q 011536 317 SFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGM--DVHDS 394 (483)
Q Consensus 317 ~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl--~~he~ 394 (483)
+|+++|+++|++++++++++++++|||+++++|++++++.+++ . |+.+++.|++|||+|+ ++||.
T Consensus 199 ~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~----~---------G~~~~~~~~~GHGiG~~lg~~E~ 265 (323)
T PRK15173 199 EPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKK----S---------GLPNYNRGHLGHGNGVFLGLEES 265 (323)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH----c---------CCccccCCCCCCcCCCCCCcCCC
Confidence 9999999999999999999999999999999999999998876 3 4556778999999995 88999
Q ss_pred CCCC--CCCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcCCCeeeCCCCCCCCHH
Q 011536 395 SVVT--YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITETGYEVLTGSLPKEIK 457 (483)
Q Consensus 395 p~~~--~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte~G~e~LT~~~p~e~~ 457 (483)
|.+. ++.+|++||||+||||+|.++. +|+||||+|+||++|+|+||. .|+++.
T Consensus 266 P~i~~~~~~~Le~GMV~tiEPgiy~~g~---------ggvriEDtvlVTe~G~e~LT~-~p~~l~ 320 (323)
T PRK15173 266 PFVSTHATESFTSGMVLSLETPYYGYNL---------GSIMIEDMILINKEGIEFLSK-LPRDLV 320 (323)
T ss_pred CCCCCCCCCccCCCCEEEECCEEEcCCC---------cEEEEeeEEEEcCCcceeCCC-CCccce
Confidence 9876 4689999999999999999876 699999999999999999997 999875
No 11
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=3.3e-51 Score=401.47 Aligned_cols=231 Identities=21% Similarity=0.215 Sum_probs=205.7
Q ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCC---------CCCCccEEEeCCCCCccc
Q 011536 209 RWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQ---------RMAFNPVVGGGPNAAVIH 279 (483)
Q Consensus 209 R~vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~---------~~~~~~iVasG~na~~~h 279 (483)
..|||++||+.||+|++|+++++.++++.++||+||.||++.+++.+++.|+. ..+|++++++|.|+.++|
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~H 81 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVAH 81 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEeccccccC
Confidence 36999999999999999999999999999999999999999999999988752 257999999999999999
Q ss_pred ccCCCcccCCCCeEEEeccc---------------------------eeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHH
Q 011536 280 YSRNDQKIDDGDLVLMDVGC---------------------------ELHGYVSDMTRTWPPCGSFSSLEEALYDLILQT 332 (483)
Q Consensus 280 ~~~~~~~l~~Gd~vlvD~g~---------------------------~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~ 332 (483)
+.|+++.|++||+|++|+|+ .|+||++|++|||.+ |+++++|+++|++++++
T Consensus 82 ~~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~v-G~~~~~~~~l~~~~~ea 160 (286)
T PRK07281 82 AFPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAV-GTPSDEVKNLMDVTKEA 160 (286)
T ss_pred CCCCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEEC-CCCCHHHHHHHHHHHHH
Confidence 99999999999999999997 489999999999987 99999999999999999
Q ss_pred HHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccCCcccCCCCC------CCCCcCCC
Q 011536 333 NKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVT------YERPLEPG 406 (483)
Q Consensus 333 ~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p~~~------~~~~L~~G 406 (483)
|+++++.+|||++++||++++++.+++ .| +.. +.|++||+||+++||.|.++ ++.+|++|
T Consensus 161 ~~~ai~~~kpG~~~~di~~a~~~~~~~----~G---------~~~-~~~~~GHGIGl~~hE~P~i~~~~~~~~~~~Le~G 226 (286)
T PRK07281 161 MYRGIEQAVVGNRIGDIGAAIQEYAES----RG---------YGV-VRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREG 226 (286)
T ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHHH----cC---------Ccc-CCCeeeeeCCCccCCCCcCCCcccCCCCCEECCC
Confidence 999999999999999999999998875 44 444 57999999999999999774 35789999
Q ss_pred CEEEecceeeeCCCC---CCCCcc------ceeeEEEeEEEEEcCCCeeeCCCCCCCC
Q 011536 407 VVITIEPGIYIPLSF---SGPERF------RGIGIRIEDEVLITETGYEVLTGSLPKE 455 (483)
Q Consensus 407 mv~tiEPgiy~p~~~---~~~~~~------~g~GvriED~vlVte~G~e~LT~~~p~e 455 (483)
|||||||++|++... .++..| .++|+|+||+|+||++|+|+||. .++|
T Consensus 227 MV~tiEPgiy~~~~~~~~~~~~gw~~~~~~g~~gvr~EdtvlVT~~G~e~LT~-~~~~ 283 (286)
T PRK07281 227 MVLTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGPVILTS-QGEE 283 (286)
T ss_pred CEEEECCeeEcCCcceecccCCCceEEecCCCcEEEeccEEEEeCCcceECCC-CCcc
Confidence 999999999984321 122233 46799999999999999999997 6665
No 12
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=4e-51 Score=396.38 Aligned_cols=226 Identities=21% Similarity=0.244 Sum_probs=203.5
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCC-----CCCccEEEeCCCCCcccccCCC
Q 011536 210 WVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQR-----MAFNPVVGGGPNAAVIHYSRND 284 (483)
Q Consensus 210 ~vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~-----~~~~~iVasG~na~~~h~~~~~ 284 (483)
.||||+||++||+|++++++++.++++.++||+||.||++.+++.+.+.|++. .+|++++++|.|+..+|+.|++
T Consensus 3 ~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~~~H~~p~~ 82 (248)
T PRK12897 3 TIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPAD 82 (248)
T ss_pred eeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCEeecCCCCC
Confidence 69999999999999999999999999999999999999999999999999873 5788889999999999999999
Q ss_pred cccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhc
Q 011536 285 QKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEI 364 (483)
Q Consensus 285 ~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~ 364 (483)
+.|++||+|++|+|+.|+||++|++|||++ |+++++|+++|++++++++++++++|||++++||+.++.+.+++ .
T Consensus 83 ~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~v-G~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~----~ 157 (248)
T PRK12897 83 VPLTEGDIVTIDMVVNLNGGLSDSAWTYRV-GKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVAN----E 157 (248)
T ss_pred cccCCCCEEEEEeeEEECCEEEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHH----c
Confidence 999999999999999999999999999998 89999999999999999999999999999999999998888876 4
Q ss_pred CcccCCCCCCCCCCCCcceeEeccCCcccCCCCC------CCCCcCCCCEEEecceeeeCC------CCCCCCc--ccee
Q 011536 365 GIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVT------YERPLEPGVVITIEPGIYIPL------SFSGPER--FRGI 430 (483)
Q Consensus 365 G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p~~~------~~~~L~~Gmv~tiEPgiy~p~------~~~~~~~--~~g~ 430 (483)
|+ . .++|++||+||+++||.|.+. +..+|++||||||||++|++. .+.|+.. ...+
T Consensus 158 g~---------~-~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~ 227 (248)
T PRK12897 158 GF---------S-VARDFTGHGIGKEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKL 227 (248)
T ss_pred CC---------c-cCCCeEECccCCcccCCCccCCCCCCCCCCCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCe
Confidence 43 3 347999999999999999764 357999999999999999633 1233321 2226
Q ss_pred eEEEeEEEEEcCCCeeeCCC
Q 011536 431 GIRIEDEVLITETGYEVLTG 450 (483)
Q Consensus 431 GvriED~vlVte~G~e~LT~ 450 (483)
|+|+||||+||++|+|+||.
T Consensus 228 g~r~edtv~Vt~~G~e~lt~ 247 (248)
T PRK12897 228 SAQYEHTIAITKDGPIILTK 247 (248)
T ss_pred EeecceEEEEeCCccEEeec
Confidence 99999999999999999996
No 13
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=2.2e-50 Score=397.92 Aligned_cols=237 Identities=24% Similarity=0.333 Sum_probs=206.8
Q ss_pred HHHHHHhhc-cCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCC-------CCCCccEEEeCC
Q 011536 202 SRLTHELRW-VKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQ-------RMAFNPVVGGGP 273 (483)
Q Consensus 202 ~~~i~~lR~-vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~-------~~~~~~iVasG~ 273 (483)
.+.++++|. |||++||+.||+|++|++++++++++.++||+||.||++.++..+...|+. ..+|++++++|.
T Consensus 33 ~~~~~~~~i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~ 112 (291)
T PRK12318 33 QLYASQYDIIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSL 112 (291)
T ss_pred hhccCCCceEECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeec
Confidence 444555666 999999999999999999999999999999999999999998888888864 246888999999
Q ss_pred CCCcccccCCCcccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHH
Q 011536 274 NAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYS 353 (483)
Q Consensus 274 na~~~h~~~~~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~ 353 (483)
|+.++|+.|++++|++||+|++|+|+.|+||++|++|||++ |+|+++|+++|++++++++++++++|||++++||+.++
T Consensus 113 n~~~~H~~p~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~v-G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~ 191 (291)
T PRK12318 113 NEVICHGIPNDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMI-GEVSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVI 191 (291)
T ss_pred cceeecCCCCCCccCCCCEEEEEEeEEECcEEEEEEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999998 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccCCcccCCCCC-----CCCCcCCCCEEEecceeeeCCCCCC-----
Q 011536 354 VGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVT-----YERPLEPGVVITIEPGIYIPLSFSG----- 423 (483)
Q Consensus 354 ~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p~~~-----~~~~L~~Gmv~tiEPgiy~p~~~~~----- 423 (483)
++++++ .|+ .. ..|++||+||+++||.|.+. ++.+|++||||+|||++|+++...+
T Consensus 192 ~~~~~~----~G~---------~~-~~~~~GHgIGl~~hE~P~i~~~~~~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~ 257 (291)
T PRK12318 192 ENCADK----YGF---------SV-VDQFVGHGVGIKFHENPYVPHHRNSSKIPLAPGMIFTIEPMINVGKKEGVIDPIN 257 (291)
T ss_pred HHHHHH----cCC---------cc-CCCcccCCcCccccCCCcccCcCCCCCCEeCCCCEEEECCEEEcCCCceEEecCC
Confidence 888876 444 22 25889999999999999874 3578999999999999999853211
Q ss_pred ----CCccceeeEEEeEEEEEcCCCeeeCCCCCCC
Q 011536 424 ----PERFRGIGIRIEDEVLITETGYEVLTGSLPK 454 (483)
Q Consensus 424 ----~~~~~g~GvriED~vlVte~G~e~LT~~~p~ 454 (483)
--..+..++++||||+||++|+|+||. .|+
T Consensus 258 ~~~~~~~~g~~~~~~edtv~VTe~G~e~LT~-~~~ 291 (291)
T PRK12318 258 HWEARTCDNQPSAQWEHTILITETGYEILTL-LDK 291 (291)
T ss_pred CcEEEecCCCeeeeeeeEEEEcCCcceeCCC-CCC
Confidence 001122466789999999999999997 775
No 14
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=3.4e-50 Score=390.09 Aligned_cols=226 Identities=24% Similarity=0.310 Sum_probs=203.7
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCC-----CCCccEEEeCCCCCcccccCCC
Q 011536 210 WVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQR-----MAFNPVVGGGPNAAVIHYSRND 284 (483)
Q Consensus 210 ~vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~-----~~~~~iVasG~na~~~h~~~~~ 284 (483)
+|||++||++||+|++|++++++.+++.++||+||.||++.+++.+.+.|++. .+|++++++|.|+.++|+.|+|
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~ 81 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDK 81 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCC
Confidence 69999999999999999999999999999999999999999999999999763 2477889999999999999999
Q ss_pred cccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhc
Q 011536 285 QKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEI 364 (483)
Q Consensus 285 ~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~ 364 (483)
++|++||+|++|+|+.|+||++|++|||++ |+|+++|+++|++++++++++++++|||++++||++++++.+.+ .
T Consensus 82 ~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~v-G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~----~ 156 (247)
T TIGR00500 82 KVLKDGDIVNIDVGVIYDGYHGDTAKTFLV-GKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEA----K 156 (247)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH----c
Confidence 999999999999999999999999999998 89999999999999999999999999999999999999988776 4
Q ss_pred CcccCCCCCCCCCCCCcceeEeccCCcccCCCCC------CCCCcCCCCEEEecceeeeCCC--------CCCCCcccee
Q 011536 365 GIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVT------YERPLEPGVVITIEPGIYIPLS--------FSGPERFRGI 430 (483)
Q Consensus 365 G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p~~~------~~~~L~~Gmv~tiEPgiy~p~~--------~~~~~~~~g~ 430 (483)
|+. . +.|++||+||+++||.|.++ ++.+|++||||+|||++|++.. +..+.+++.+
T Consensus 157 g~~---------~-~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~ 226 (247)
T TIGR00500 157 GFS---------V-VREYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSL 226 (247)
T ss_pred CCE---------e-ccCccCCccCcccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCe
Confidence 542 2 35789999999999999764 3689999999999999998642 1223345668
Q ss_pred eEEEeEEEEEcCCCeeeCCC
Q 011536 431 GIRIEDEVLITETGYEVLTG 450 (483)
Q Consensus 431 GvriED~vlVte~G~e~LT~ 450 (483)
|+||||+|+||++|+|+||.
T Consensus 227 g~ried~v~Vt~~G~e~Lt~ 246 (247)
T TIGR00500 227 SAQFEHTIVITDNGPEILTE 246 (247)
T ss_pred EEEEeEEEEEcCCccEEccC
Confidence 99999999999999999995
No 15
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=1e-49 Score=385.72 Aligned_cols=233 Identities=47% Similarity=0.795 Sum_probs=211.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCccEEEeCCCCCcccccCCCcccCCCCeEEEe
Q 011536 217 LKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMD 296 (483)
Q Consensus 217 I~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~iVasG~na~~~h~~~~~~~l~~Gd~vlvD 296 (483)
|++||+|++++++++.++++.++||+||.||++.+++.+.+.|++ ++|+++|++|.|+..+|+.|++++|++||+|++|
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~-~~~~~~v~~g~~~~~~H~~~~~~~l~~Gd~v~vD 79 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGAR-LAYSYIVAAGSNAAILHYVHNDQPLKDGDLVLID 79 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCC-cCCCCeEEECCCccccCCCcCCCcCCCCCEEEEE
Confidence 679999999999999999999999999999999999999999998 6789999999999999999999999999999999
Q ss_pred ccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCC-----C
Q 011536 297 VGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSD-----G 371 (483)
Q Consensus 297 ~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~-----~ 371 (483)
+|+.|+||++|++|||+++|+++++|+++|++++++++++++.+|||++++||++++++.+++.+.++|+.... .
T Consensus 80 ~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~ 159 (243)
T cd01087 80 AGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVE 159 (243)
T ss_pred eCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhh
Confidence 99999999999999999877999999999999999999999999999999999999999999988778875311 0
Q ss_pred CCCCCCCCCcceeEeccCCcccCCCC----CCCCCcCCCCEEEecceeeeCCCC-CCCCccceeeEEEeEEEEEcCCCee
Q 011536 372 TDPYNELNPTSIGHYLGMDVHDSSVV----TYERPLEPGVVITIEPGIYIPLSF-SGPERFRGIGIRIEDEVLITETGYE 446 (483)
Q Consensus 372 ~~~~~~~~~h~~GH~iGl~~he~p~~----~~~~~L~~Gmv~tiEPgiy~p~~~-~~~~~~~g~GvriED~vlVte~G~e 446 (483)
..++..+++|++||++|+++||.|.+ .++.+|++||||+|||++|+|+.. ..+++++.+|+||||+|+||++|+|
T Consensus 160 ~~~~~~~~~h~~GhgiGl~~~e~p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~Vt~~G~e 239 (243)
T cd01087 160 SGAYAKFFPHGLGHYLGLDVHDVGGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLVTEDGPE 239 (243)
T ss_pred hhhhhhhcCCCCccccCcccccCccccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEEcCCcce
Confidence 00245789999999999999999965 357899999999999999999732 2356667789999999999999999
Q ss_pred eCCC
Q 011536 447 VLTG 450 (483)
Q Consensus 447 ~LT~ 450 (483)
+||.
T Consensus 240 ~Lt~ 243 (243)
T cd01087 240 NLTR 243 (243)
T ss_pred eCcC
Confidence 9984
No 16
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=6.5e-49 Score=382.27 Aligned_cols=231 Identities=25% Similarity=0.284 Sum_probs=206.6
Q ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCC-----CCCCccEEEeCCCCCcccccCC
Q 011536 209 RWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQ-----RMAFNPVVGGGPNAAVIHYSRN 283 (483)
Q Consensus 209 R~vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~-----~~~~~~iVasG~na~~~h~~~~ 283 (483)
-+|||++||+.||+|++++++++..+++.++||+||.||++.+++.+.+.|+. ...|++++++|.|+..+|+.++
T Consensus 3 ~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~~ 82 (252)
T PRK05716 3 ITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIPS 82 (252)
T ss_pred eeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCCC
Confidence 47999999999999999999999999999999999999999999999999885 2457778999999999999999
Q ss_pred CcccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHh
Q 011536 284 DQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKE 363 (483)
Q Consensus 284 ~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~ 363 (483)
+++|++||+|++|+|+.|+||++|++|||++ |+++++|+++|++++++++++++++|||++++||++++++.+++
T Consensus 83 ~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~v-G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~---- 157 (252)
T PRK05716 83 DKVLKEGDIVNIDVTVIKDGYHGDTSRTFGV-GEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEA---- 157 (252)
T ss_pred CcccCCCCEEEEEEEEEECCEEEEeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH----
Confidence 9999999999999999999999999999998 99999999999999999999999999999999999999998876
Q ss_pred cCcccCCCCCCCCCCCCcceeEeccCCcccCCCCC------CCCCcCCCCEEEecceeeeCCC------CCCC--Cccce
Q 011536 364 IGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVT------YERPLEPGVVITIEPGIYIPLS------FSGP--ERFRG 429 (483)
Q Consensus 364 ~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p~~~------~~~~L~~Gmv~tiEPgiy~p~~------~~~~--~~~~g 429 (483)
.|+ .. ..|++||+||+++||.|.+. ++.+|++||||+|||++|++.. ..|. .+++.
T Consensus 158 ~g~---------~~-~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~ 227 (252)
T PRK05716 158 EGF---------SV-VREYCGHGIGRKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGS 227 (252)
T ss_pred cCC---------ee-ecCccccccCCccCCCCccCcCCCCCCCCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCC
Confidence 444 22 45789999999999999763 4689999999999999998532 1221 22456
Q ss_pred eeEEEeEEEEEcCCCeeeCCCCCCCC
Q 011536 430 IGIRIEDEVLITETGYEVLTGSLPKE 455 (483)
Q Consensus 430 ~GvriED~vlVte~G~e~LT~~~p~e 455 (483)
+|+||||+|+||++|+|+||. .|+|
T Consensus 228 ~g~~~ed~v~Vt~~G~e~Lt~-~~~~ 252 (252)
T PRK05716 228 LSAQYEHTVAVTEDGPEILTL-RPEE 252 (252)
T ss_pred cEEeeeeEEEEcCCccEEeeC-CCCC
Confidence 799999999999999999997 7875
No 17
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=1.6e-48 Score=372.88 Aligned_cols=215 Identities=23% Similarity=0.257 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCC------ccEEEeCCCCCcccccCCCcccCCC
Q 011536 217 LKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAF------NPVVGGGPNAAVIHYSRNDQKIDDG 290 (483)
Q Consensus 217 I~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~------~~iVasG~na~~~h~~~~~~~l~~G 290 (483)
|++||+|++++++++.++++.++||+||.||++.+.+.+.+.|+....| .++|++|+|+..+|+.+++++|++|
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~G 80 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRG 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCC
Confidence 6799999999999999999999999999999999999999998764433 2689999999999999999999999
Q ss_pred CeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCC
Q 011536 291 DLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSD 370 (483)
Q Consensus 291 d~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~ 370 (483)
|+|++|+|+.|+||++|++|||++ |+|+++|+++|++++++|+++++++|||+++.||++++++.+++ .
T Consensus 81 D~v~~d~g~~~~GY~ad~~RT~~v-G~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~----~------ 149 (228)
T cd01090 81 DILSLNCFPMIAGYYTALERTLFL-DEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYRE----H------ 149 (228)
T ss_pred CEEEEEEeEEECCEeeeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH----c------
Confidence 999999999999999999999998 89999999999999999999999999999999999999998876 3
Q ss_pred CCCCCCCCCCcceeEeccCCcccCCC-----CC--CCCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcCC
Q 011536 371 GTDPYNELNPTSIGHYLGMDVHDSSV-----VT--YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITET 443 (483)
Q Consensus 371 ~~~~~~~~~~h~~GH~iGl~~he~p~-----~~--~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte~ 443 (483)
|+..++.|++||++|+.+||.|. +. .+.+|++||||+|||++|+|... | ..+|+|+||+|+||++
T Consensus 150 ---G~~~~~~~~~GHgiGl~~he~~~~~g~~~~~~~~~~Le~GMV~~iEP~i~~~~~~--~---g~gG~ried~v~Vt~~ 221 (228)
T cd01090 150 ---DLLRYRTFGYGHSFGVLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEGQ--P---GAGGYREHDILVINEN 221 (228)
T ss_pred ---CCCcccccccCcccccccccCCCccccccCCCCCCccCCCCEEEECCEEeecccC--C---CCcEEEeeeEEEECCC
Confidence 45677889999999999999873 22 46899999999999999986310 0 0169999999999999
Q ss_pred CeeeCCC
Q 011536 444 GYEVLTG 450 (483)
Q Consensus 444 G~e~LT~ 450 (483)
|+|+||.
T Consensus 222 G~e~Lt~ 228 (228)
T cd01090 222 GAENITG 228 (228)
T ss_pred ccccCcC
Confidence 9999984
No 18
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=7.6e-48 Score=391.39 Aligned_cols=238 Identities=21% Similarity=0.270 Sum_probs=212.7
Q ss_pred HHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCC-----CCCccEEEeCCCCCccc
Q 011536 205 THELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQR-----MAFNPVVGGGPNAAVIH 279 (483)
Q Consensus 205 i~~lR~vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~-----~~~~~iVasG~na~~~h 279 (483)
+.++|+|||++||+.||+|++++.+++..+++.++||+||.||++.++..+.++|+.. .+|+.++++|.|..++|
T Consensus 131 ~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~H 210 (396)
T PLN03158 131 LQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICH 210 (396)
T ss_pred cccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeecccccccC
Confidence 4567999999999999999999999999999999999999999999999999998764 35788899999999999
Q ss_pred ccCCCcccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHH
Q 011536 280 YSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRK 359 (483)
Q Consensus 280 ~~~~~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~ 359 (483)
+.|++++|++||+|++|+|+.|+||++|++|||+| |+++++|+++|+++.++++++++++|||++++||++++++.+.+
T Consensus 211 gip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~V-G~~~~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~~~~~ 289 (396)
T PLN03158 211 GIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFV-GNVDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATM 289 (396)
T ss_pred CCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999999999999999999999999999998888765
Q ss_pred HHHhcCcccCCCCCCCCCCCCcceeEeccCCcccCCCCCC------CCCcCCCCEEEecceeeeCC--CCCCCCccc---
Q 011536 360 GLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTY------ERPLEPGVVITIEPGIYIPL--SFSGPERFR--- 428 (483)
Q Consensus 360 ~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p~~~~------~~~L~~Gmv~tiEPgiy~p~--~~~~~~~~~--- 428 (483)
.|+ . .+.|++|||||+.+||.|.+.. ..+|++||||||||++|+.. ...||+.|.
T Consensus 290 ----~G~---------~-~v~~~~GHGIG~~~He~P~i~~~~~~~~~~~l~~GMVfTIEP~i~~g~~~~~~~~d~wt~~t 355 (396)
T PLN03158 290 ----SGL---------S-VVKSYCGHGIGELFHCAPNIPHYARNKAVGVMKAGQVFTIEPMINAGVWRDRMWPDGWTAVT 355 (396)
T ss_pred ----cCC---------C-ccCCccCCccccccCCCCCCCcccCCCCCCEecCCcEEEECCeeccCcccceecCCCceEEe
Confidence 454 2 2568899999999999998851 26899999999999999732 235666553
Q ss_pred ---eeeEEEeEEEEEcCCCeeeCCCCCCCCHH
Q 011536 429 ---GIGIRIEDEVLITETGYEVLTGSLPKEIK 457 (483)
Q Consensus 429 ---g~GvriED~vlVte~G~e~LT~~~p~e~~ 457 (483)
..++|+||||+||++|+|+||...|+.+.
T Consensus 356 ~dG~~~aq~E~tvlVTe~G~EiLT~~~~~~~~ 387 (396)
T PLN03158 356 ADGKRSAQFEHTLLVTETGVEVLTARLPSSPD 387 (396)
T ss_pred cCCceeeEeeeEEEEeCCcceECCCCCCCCcc
Confidence 34789999999999999999987887754
No 19
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=2.6e-47 Score=371.67 Aligned_cols=229 Identities=25% Similarity=0.265 Sum_probs=203.7
Q ss_pred HhhccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCC-----CCCccEEEeCCCCCccccc
Q 011536 207 ELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQR-----MAFNPVVGGGPNAAVIHYS 281 (483)
Q Consensus 207 ~lR~vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~-----~~~~~iVasG~na~~~h~~ 281 (483)
++++|||++||++||+|++++++++..+++.++||+||.||++.+.+.+.+.|+.. ..|++++++|.|..++|+.
T Consensus 6 ~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~h~~ 85 (255)
T PRK12896 6 RGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHGI 85 (255)
T ss_pred CceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCeeEecC
Confidence 45689999999999999999999999999999999999999999999999999873 3577788899999999999
Q ss_pred CCCcccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHH
Q 011536 282 RNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGL 361 (483)
Q Consensus 282 ~~~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l 361 (483)
|++++|++||+|++|+|+.|+||++|++|||++ |+++++|+++|++++++++++++++|||+++++|++++++.+.+
T Consensus 86 p~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~v-G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~-- 162 (255)
T PRK12896 86 PGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAV-GPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKK-- 162 (255)
T ss_pred CCCccCCCCCEEEEEEeEEECcEEEeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH--
Confidence 999999999999999999999999999999998 89999999999999999999999999999999999999888876
Q ss_pred HhcCcccCCCCCCCCCCCCcceeEeccCCcccCCCCC-------CCCCcCCCCEEEecceeeeCCC------CCC--CCc
Q 011536 362 KEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVT-------YERPLEPGVVITIEPGIYIPLS------FSG--PER 426 (483)
Q Consensus 362 ~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p~~~-------~~~~L~~Gmv~tiEPgiy~p~~------~~~--~~~ 426 (483)
.|+ . .+.|++||+||+.+||.|.+. .+.+|++||||+|||++|.... +.| ...
T Consensus 163 --~G~---------~-~~~~~~GHgiG~~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~ 230 (255)
T PRK12896 163 --NGY---------S-VVRDLTGHGVGRSLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTP 230 (255)
T ss_pred --cCC---------E-eccCcccCCcCcccccCCCccccCCCCCCCCEecCCcEEEEeceEEcCCCceEEcCCCCEEEec
Confidence 443 2 246889999999999999532 3679999999999999986321 222 223
Q ss_pred cceeeEEEeEEEEEcCCCeeeCCC
Q 011536 427 FRGIGIRIEDEVLITETGYEVLTG 450 (483)
Q Consensus 427 ~~g~GvriED~vlVte~G~e~LT~ 450 (483)
.+.+|+|+||||+||++|+|+||.
T Consensus 231 ~~~~~~~~edtv~vt~~G~e~Lt~ 254 (255)
T PRK12896 231 DKSLSAQFEHTVVVTRDGPEILTD 254 (255)
T ss_pred CCCeEEEEEEEEEEcCCcceecCC
Confidence 456899999999999999999996
No 20
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=1.8e-46 Score=361.01 Aligned_cols=221 Identities=18% Similarity=0.301 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHHHHHHHHHH-----hcCCC--CcHHHHHHHHHHHHHHcCCC---------CCCCccEEEeCCCC-Cccc
Q 011536 217 LKLMRESASIGCQALLQTML-----HSKSH--PYEGLLAAKFEYECKMRGAQ---------RMAFNPVVGGGPNA-AVIH 279 (483)
Q Consensus 217 I~~mR~A~~i~~~a~~~~~~-----~~~~G--~tE~el~a~~~~~~~~~G~~---------~~~~~~iVasG~na-~~~h 279 (483)
|++||+|++++..+|+..+. .+.+| +||.+|+..++..+...+.. .++|+|||+||.|+ ..+|
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~y~~iv~sG~~~~~l~h 80 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLDWCYPPIIQSGGNYDLLKS 80 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHcCcccCCeEeECcCcccCCC
Confidence 46899999999999987665 78899 99999999999999988755 67999999999999 8899
Q ss_pred ccCCCcccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHH
Q 011536 280 YSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRK 359 (483)
Q Consensus 280 ~~~~~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~ 359 (483)
+.++++.+..|++|++|+|++|+|||||+||||++ | |+++|+++|++++++|+++++++|||+++++|++++++.+.+
T Consensus 81 ~~~s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v-~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~ 158 (243)
T cd01091 81 SSSSDKLLYHFGVIICSLGARYKSYCSNIARTFLI-D-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKK 158 (243)
T ss_pred CCCCccccCCCCEEEEEeCcccCCEeecceEEEEc-C-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 5 799999999999999999999999999999999999999987
Q ss_pred HHHhcCcccCCCCCCCCCCCCcceeEeccCCcccCCC-CC--CCCCcCCCCEEEecceee-eCCCCCCCCccceeeEEEe
Q 011536 360 GLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSV-VT--YERPLEPGVVITIEPGIY-IPLSFSGPERFRGIGIRIE 435 (483)
Q Consensus 360 ~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p~-~~--~~~~L~~Gmv~tiEPgiy-~p~~~~~~~~~~g~GvriE 435 (483)
... ++..+|+|++||+|||++||.|. +. ++.+|++||||+||||+| +++...++++++.+|+|||
T Consensus 159 ~~~-----------~~~~~~~~~~GHgiGle~hE~~~~l~~~~~~~L~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ie 227 (243)
T cd01091 159 KKP-----------ELEPNFTKNLGFGIGLEFRESSLIINAKNDRKLKKGMVFNLSIGFSNLQNPEPKDKESKTYALLLS 227 (243)
T ss_pred hCh-----------hHHHhCcCCcccccCcccccCccccCCCCCCCcCCCCEEEEeCCcccccCccccCccCCeeEEEEE
Confidence 421 34578999999999999999875 33 578999999999999999 7775566777888999999
Q ss_pred EEEEEcCCCe-eeCCC
Q 011536 436 DEVLITETGY-EVLTG 450 (483)
Q Consensus 436 D~vlVte~G~-e~LT~ 450 (483)
|||+||++|+ ++||.
T Consensus 228 DtV~Vt~~G~~~~LT~ 243 (243)
T cd01091 228 DTILVTEDEPAIVLTN 243 (243)
T ss_pred EEEEEcCCCCceecCC
Confidence 9999999999 99984
No 21
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=6.3e-45 Score=343.79 Aligned_cols=206 Identities=36% Similarity=0.612 Sum_probs=194.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCccEEEeCCCCCcccccCCCcccCCCCeEEEe
Q 011536 217 LKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMD 296 (483)
Q Consensus 217 I~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~iVasG~na~~~h~~~~~~~l~~Gd~vlvD 296 (483)
|+.||+|+++++.++.++.+.++||+||.||++.+++.+.+.|++..+|+++|++|.|+..+|+.|+++++++||+|++|
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~gd~v~id 80 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEGPSFDTIVASGPNSALPHGVPSDRKIEEGDLVLID 80 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCCCCCcEEEECccccccCCCCCCcCcCCCCEEEEE
Confidence 57999999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred ccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCC
Q 011536 297 VGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYN 376 (483)
Q Consensus 297 ~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~ 376 (483)
+|+.|+||++|++|||++ |+++++|+++|++++++++++++++|||++++||++++.+.+++ .| +.
T Consensus 81 ~g~~~~gy~~d~~RT~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~----~g---------~~ 146 (208)
T cd01092 81 FGAIYDGYCSDITRTVAV-GEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEE----AG---------YG 146 (208)
T ss_pred eeeeECCEeccceeEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH----cC---------cc
Confidence 999999999999999998 89999999999999999999999999999999999999998876 33 44
Q ss_pred CCCCcceeEeccCCcccCCCCC--CCCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcCCCe
Q 011536 377 ELNPTSIGHYLGMDVHDSSVVT--YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITETGY 445 (483)
Q Consensus 377 ~~~~h~~GH~iGl~~he~p~~~--~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte~G~ 445 (483)
.+++|++||++|+++||.|.+. ++.+|++||||+|||++|+++. +|+|+||+|+||++|+
T Consensus 147 ~~~~~~~Gh~iG~~~~e~p~i~~~~~~~l~~gmv~~iep~~~~~~~---------~g~~~ed~v~vt~~g~ 208 (208)
T cd01092 147 EYFIHRTGHGVGLEVHEAPYISPGSDDVLEEGMVFTIEPGIYIPGK---------GGVRIEDDVLVTEDGC 208 (208)
T ss_pred ccCCCCCccccCcccCcCCCcCCCCCCCcCCCCEEEECCeEEecCC---------CEEEeeeEEEECCCCC
Confidence 6789999999999999999876 4789999999999999999886 7999999999999985
No 22
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=1.7e-44 Score=348.28 Aligned_cols=219 Identities=28% Similarity=0.329 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCC-----CCCccEEEeCCCCCcccccCCCcccCCCC
Q 011536 217 LKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQR-----MAFNPVVGGGPNAAVIHYSRNDQKIDDGD 291 (483)
Q Consensus 217 I~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~-----~~~~~iVasG~na~~~h~~~~~~~l~~Gd 291 (483)
|+.||+|+++++++++++++.++||+||.||++.+.+.+.++|++. ..|++.+.+|.|+..+|+.|++++|++||
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd 80 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGD 80 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCCCcccCCCC
Confidence 6899999999999999999999999999999999999999999864 34667788999999999999999999999
Q ss_pred eEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCC
Q 011536 292 LVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDG 371 (483)
Q Consensus 292 ~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~ 371 (483)
+|++|+|+.|+||++|++|||++ |+++++|+++|++++++++++++++|||+++.||++++++.+++ .|+
T Consensus 81 ~v~id~g~~~~GY~ad~~RT~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~----~G~----- 150 (238)
T cd01086 81 IVNIDVGVELDGYHGDSARTFIV-GEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEK----NGY----- 150 (238)
T ss_pred EEEEEEEEEECCEEEEEEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH----cCc-----
Confidence 99999999999999999999998 89999999999999999999999999999999999999998876 443
Q ss_pred CCCCCCCCCcceeEeccCCcccCCCCC------CCCCcCCCCEEEecceeeeCCC--------CCCCCccceeeEEEeEE
Q 011536 372 TDPYNELNPTSIGHYLGMDVHDSSVVT------YERPLEPGVVITIEPGIYIPLS--------FSGPERFRGIGIRIEDE 437 (483)
Q Consensus 372 ~~~~~~~~~h~~GH~iGl~~he~p~~~------~~~~L~~Gmv~tiEPgiy~p~~--------~~~~~~~~g~GvriED~ 437 (483)
. .+.|++||++|+.+||.|.+. ++.+|++||||+|||++|++.. +.+..+...+|+|+||+
T Consensus 151 ----~-~~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edt 225 (238)
T cd01086 151 ----S-VVREFGGHGIGRKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHT 225 (238)
T ss_pred ----c-eecCccccCCCCccccCCCcCCccCCCCCCEecCCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeE
Confidence 2 246889999999999999754 4789999999999999997421 11122233479999999
Q ss_pred EEEcCCCeeeCCC
Q 011536 438 VLITETGYEVLTG 450 (483)
Q Consensus 438 vlVte~G~e~LT~ 450 (483)
|+||++|+|+||.
T Consensus 226 v~Vte~G~e~Lt~ 238 (238)
T cd01086 226 VLITEDGPEILTL 238 (238)
T ss_pred EEEcCCcceeCCC
Confidence 9999999999984
No 23
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=1e-42 Score=331.33 Aligned_cols=204 Identities=27% Similarity=0.360 Sum_probs=180.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCC--CcHHHHHHHHHHHHHHcC-CCCCCCccEEEeCCCCCcccccCC---CcccCCCC
Q 011536 218 KLMRESASIGCQALLQTMLHSKSH--PYEGLLAAKFEYECKMRG-AQRMAFNPVVGGGPNAAVIHYSRN---DQKIDDGD 291 (483)
Q Consensus 218 ~~mR~A~~i~~~a~~~~~~~~~~G--~tE~el~a~~~~~~~~~G-~~~~~~~~iVasG~na~~~h~~~~---~~~l~~Gd 291 (483)
+.||.+..+ ..+++.+.+.++|| +||.||++.+++.+...| ....+|+++|++|+|+.++|+.|+ +++|++||
T Consensus 5 ~~~~~~~~~-~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~~~f~~~v~~g~n~~~~H~~p~~~~~r~l~~GD 83 (224)
T cd01085 5 AHIRDGVAL-VEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVGLSFDTISGFGPNGAIVHYSPTEESNRKISPDG 83 (224)
T ss_pred HHHHHHHHH-HHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcCCCcceEEEecCccCcCCCCcCcccCcccCCCC
Confidence 345665555 47777788889999 999999999998777665 345689999999999999999999 99999999
Q ss_pred eEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCCChHHHHHHHHHHHHHHHHhcCcccCC
Q 011536 292 LVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCM-PGTSLLQIHHYSVGMLRKGLKEIGIVNSD 370 (483)
Q Consensus 292 ~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~r-pG~~~~~i~~~~~~~l~~~l~~~G~~~~~ 370 (483)
+|++|+|+.|+||++|++|||++ |+++++|+++|+.+++++.++++.++ ||+++.+|++++++.+.+ .|
T Consensus 84 ~V~iD~g~~~~gY~aD~~RT~~v-G~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~----~g----- 153 (224)
T cd01085 84 LYLIDSGGQYLDGTTDITRTVHL-GEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWK----AG----- 153 (224)
T ss_pred EEEEEeCccCCCcccccEEeecC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH----hC-----
Confidence 99999999999999999999998 89999999999999999999999885 899999999999988765 33
Q ss_pred CCCCCCCCCCcceeEecc--CCcccCCCC--C--CCCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcCCC
Q 011536 371 GTDPYNELNPTSIGHYLG--MDVHDSSVV--T--YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITETG 444 (483)
Q Consensus 371 ~~~~~~~~~~h~~GH~iG--l~~he~p~~--~--~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte~G 444 (483)
+ .|.|++||+|| |++||.|.+ . ++.+|++||||+|||++|+|+. +|+|+||+|+||++|
T Consensus 154 ----~--~~~h~~GHgIG~~l~~hE~P~i~~~~~~~~~L~~GmvftiEP~iy~~g~---------~gvried~v~Vt~~G 218 (224)
T cd01085 154 ----L--DYGHGTGHGVGSFLNVHEGPQSISPAPNNVPLKAGMILSNEPGYYKEGK---------YGIRIENLVLVVEAE 218 (224)
T ss_pred ----C--CCCCCCCCCCCCCCcCCCCCCcCCcCCCCCCcCCCCEEEECCEeEeCCC---------eEEEeeEEEEEeeCC
Confidence 2 36799999999 689999976 3 4689999999999999999987 799999999999999
Q ss_pred eee
Q 011536 445 YEV 447 (483)
Q Consensus 445 ~e~ 447 (483)
+.-
T Consensus 219 ~~~ 221 (224)
T cd01085 219 TTE 221 (224)
T ss_pred cCC
Confidence 853
No 24
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=8.3e-42 Score=322.45 Aligned_cols=201 Identities=32% Similarity=0.567 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHH-HHHcCCCCCCCccEEEeCCCCCcccccCCCcccCCCCeEEEe
Q 011536 218 KLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYE-CKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMD 296 (483)
Q Consensus 218 ~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~-~~~~G~~~~~~~~iVasG~na~~~h~~~~~~~l~~Gd~vlvD 296 (483)
++||+|++++++++.++++.++||+||.||++.+.+. +.++|++.++|++++++|.|+..+|+.|+++.|++||+|++|
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~gd~v~id 80 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPNTDLPHYTPTDRRLQEGDIVIID 80 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCCCGETTTBCCSSBESTTEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCcceecceeccceeeecCCcceee
Confidence 5799999999999999999999999999999999988 678898989999999999999999999999999999999999
Q ss_pred ccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCC
Q 011536 297 VGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYN 376 (483)
Q Consensus 297 ~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~ 376 (483)
+|+.|+||++|++||+++ | ++++|+++|+.++++++.+++++|||+++.||++++.+.+.+ .|+ .
T Consensus 81 ~~~~~~gy~~d~~Rt~~~-G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~----~g~---------~ 145 (207)
T PF00557_consen 81 FGPRYDGYHADIARTFVV-G-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEE----YGL---------E 145 (207)
T ss_dssp EEEEETTEEEEEEEEEES-S-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHH----TTE---------G
T ss_pred ccceeeeeEeeeeeEEEE-e-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHh----hcc---------c
Confidence 999999999999999988 7 999999999999999999999999999999999999998876 343 3
Q ss_pred CCCCcceeEeccCCcccC-CCCC---CCCCcCCCCEEEecceee-eCCCCCCCCccceeeEEEeEEEEEcC
Q 011536 377 ELNPTSIGHYLGMDVHDS-SVVT---YERPLEPGVVITIEPGIY-IPLSFSGPERFRGIGIRIEDEVLITE 442 (483)
Q Consensus 377 ~~~~h~~GH~iGl~~he~-p~~~---~~~~L~~Gmv~tiEPgiy-~p~~~~~~~~~~g~GvriED~vlVte 442 (483)
..++|.+||+||+++||. |.+. .+.+|++||||+|||+++ .|+. +|+++||+|+|||
T Consensus 146 ~~~~~~~GH~iG~~~~~~~P~i~~~~~~~~l~~gmv~~iep~~~~~~~~---------~g~~~ed~v~Vte 207 (207)
T PF00557_consen 146 EPYPHGLGHGIGLEFHEPGPNIARPGDDTVLEPGMVFAIEPGLYFIPGW---------GGVRFEDTVLVTE 207 (207)
T ss_dssp EEBTSSSEEEESSSSSEEEEEESSTTTSSB--TTBEEEEEEEEEEETTS---------EEEEEBEEEEEES
T ss_pred ceeeecccccccccccccceeeecccccceecCCCceeEeeeEEccCCC---------cEEEEEEEEEECc
Confidence 567899999999999997 8865 688999999999999999 5655 6999999999996
No 25
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=1.1e-40 Score=313.25 Aligned_cols=205 Identities=31% Similarity=0.527 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCccEEEeCCCCCcccccCCCcccCCCCeEEEe
Q 011536 217 LKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMD 296 (483)
Q Consensus 217 I~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~iVasG~na~~~h~~~~~~~l~~Gd~vlvD 296 (483)
|+.||+|+++++.++..+++.++||+||.||.+.+.+.+.++|+ ..++.+++++|.|+..+|+.++++++++||+|++|
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~-~~~~~~~v~~g~~~~~~h~~~~~~~i~~gd~v~~d 79 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGG-YPAGPTIVGSGARTALPHYRPDDRRLQEGDLVLVD 79 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCC-CCCCCcEEEECccccCcCCCCCCCCcCCCCEEEEE
Confidence 57899999999999999999999999999999999999999999 56788999999999999999999999999999999
Q ss_pred ccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCC
Q 011536 297 VGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYN 376 (483)
Q Consensus 297 ~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~ 376 (483)
+|+.|+||++|++|||++ |+++++|+++|+.+.++++++++.+|||+++.||++++.+.+++. | +.
T Consensus 80 ~g~~~~gy~~d~~rt~~~-g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~----g---------~~ 145 (207)
T cd01066 80 LGGVYDGYHADLTRTFVI-GEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEH----G---------LG 145 (207)
T ss_pred eceeECCCccceeceeEc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHc----C---------cc
Confidence 999999999999999998 889999999999999999999999999999999999999988773 3 33
Q ss_pred CCCCcceeEeccCCcccCCCCC--CCCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcCCCe
Q 011536 377 ELNPTSIGHYLGMDVHDSSVVT--YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITETGY 445 (483)
Q Consensus 377 ~~~~h~~GH~iGl~~he~p~~~--~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte~G~ 445 (483)
.++.|++||++|++.||.|.+. .+.+|++||||+|||++|.++. +|+++||+|+||++|+
T Consensus 146 ~~~~~~~Gh~iG~~~~e~~~~~~~~~~~l~~gmv~~iep~~~~~~~---------~g~~~ed~v~vt~~g~ 207 (207)
T cd01066 146 PNFGHRTGHGIGLEIHEPPVLKAGDDTVLEPGMVFAVEPGLYLPGG---------GGVRIEDTVLVTEDGP 207 (207)
T ss_pred ccCCCCCccccCcccCCCCCcCCCCCCCcCCCCEEEECCEEEECCC---------cEEEeeeEEEEeCCCC
Confidence 5678999999999999999754 5789999999999999999875 7999999999999985
No 26
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=1.6e-39 Score=311.33 Aligned_cols=209 Identities=18% Similarity=0.228 Sum_probs=183.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHH----------cCCCCCCCccEEEeCCCCCcccccC----
Q 011536 217 LKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKM----------RGAQRMAFNPVVGGGPNAAVIHYSR---- 282 (483)
Q Consensus 217 I~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~----------~G~~~~~~~~iVasG~na~~~h~~~---- 282 (483)
++.||+|++|++++++.+++.++||+||.||....+..+.. .|+.+.+|+++|+ .|+..+|+.|
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~--~n~~~~H~~p~~~~ 78 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCIS--VNNCVCHFSPLKSD 78 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEec--cCceeecCCCCCCC
Confidence 36899999999999999999999999999998776666655 6777888988877 4888899985
Q ss_pred CCcccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCH-----HHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHH
Q 011536 283 NDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSS-----LEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGML 357 (483)
Q Consensus 283 ~~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~-----~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l 357 (483)
++++|++||+|++|+|+.|+||++|+||||++ |++++ +++++|++++++|+++++++|||++++||++++++.+
T Consensus 79 ~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v-G~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~ 157 (228)
T cd01089 79 ATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVV-GAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVI 157 (228)
T ss_pred CCcccCCCCEEEEEEEEEECCEEEEEEEEEEe-CCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 78899999999999999999999999999998 77774 8999999999999999999999999999999999988
Q ss_pred HHHHHhcCcccCCCCCCCCCCCCcceeEeccCCcccCCCCCCCCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEE
Q 011536 358 RKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTYERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDE 437 (483)
Q Consensus 358 ~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p~~~~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~ 437 (483)
.+ .|+. .+..++.|++||+ +..++.+.. -..+|++||||++||++|+|+. +|+++|||
T Consensus 158 ~~----~G~~------~~~~~~~h~~g~~--~~~~~~~~~-~~~~l~~gmvf~~ep~~~~~g~---------~~~~~~~T 215 (228)
T cd01089 158 VD----YGCT------PVEGVLSHQLKRV--VSSGEGKAK-LVECVKHGLLFPYPVLYEKEGE---------VVAQFKLT 215 (228)
T ss_pred HH----cCCE------EecCccccCcCce--EecCCCCcc-chhhccCCcccccceeEccCCC---------eEEEEEEE
Confidence 76 5543 2567889999994 456654421 2688999999999999999987 79999999
Q ss_pred EEEcCCCeeeCCC
Q 011536 438 VLITETGYEVLTG 450 (483)
Q Consensus 438 vlVte~G~e~LT~ 450 (483)
|+||++|+|.||.
T Consensus 216 v~vt~~G~e~lt~ 228 (228)
T cd01089 216 VLLTPNGVTVLTG 228 (228)
T ss_pred EEEcCCCCeeCCC
Confidence 9999999999983
No 27
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-35 Score=299.33 Aligned_cols=374 Identities=24% Similarity=0.320 Sum_probs=283.2
Q ss_pred cccCCCCCCCCccCccCCCCCCCCCHHHHHHHHHHHHHhCCCCcE-EEEecC-C-----cccccCCCCCCCCCCCceEEE
Q 011536 29 VDSGQPTPASHPQLMKEGEITPGISAEEYISRRKRLLEILPENSV-AILAAA-P-----EKMMTDVVPYPYRQDANYLYI 101 (483)
Q Consensus 29 ~~~~~p~~~~~p~~~~~~~~tpgis~~ey~~R~~rL~~~m~~~~l-~il~~~-~-----~~~~~~d~~y~f~q~~n~~YL 101 (483)
++..+|..+..|.+...-+.+ |++.+ .+...||+.|+.+++ ++|+++ + .|.|+.|++|. + .+
T Consensus 150 iW~~rP~~~~~~v~~l~~~~~-G~~~~---~Kv~~LR~~l~~~~~~a~Vvs~LdeIaWllNLRGsDipyn---P--v~-- 218 (606)
T KOG2413|consen 150 IWGDRPERPGNPVIVLDLEFA-GLSVD---DKVDNLRKKLKEKKCDAFVVTALDEIAWLLNLRGSDIPYN---P--VF-- 218 (606)
T ss_pred hhccCCccCCCceEEeecccc-Ccchh---HHHHHHHHHHhhcCCcEEehhhHHHHHHHHhcccCcCCCC---c--hh--
Confidence 666889988889888776644 77666 678999999999888 566554 2 48999999986 1 11
Q ss_pred eCCCCCCeEEEEEcCCcEEEEecCCCcccccccCcccccccccccccCccccchhhHHhHHHHhhcc--CCceEecCccc
Q 011536 102 TGCQQPGGVAVLSHECGLCMFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGR--SSKLFHNQETA 179 (483)
Q Consensus 102 tG~~~p~~~lvi~~~~~~~l~v~~~~~~~~~w~g~~~~~~~~~~~~~~d~~~~~~~~~~~L~~~~~~--~~~I~~d~~~~ 179 (483)
.++++|+.+ +..||+...+...+.-... ...++ ...+++.+...++.+... ..+|++....+
T Consensus 219 ------~sY~~it~d-ei~lfvd~~k~~~~~~~~~--------~~~~v-~i~pY~~i~~~i~~~~~~~~~~~i~ia~~~~ 282 (606)
T KOG2413|consen 219 ------YSYAIITMD-EIFLFVDNSKLSDESKKHL--------REDGV-EIRPYDQIWSDIKNWASAFADKKIWISPETN 282 (606)
T ss_pred ------hhhhhhhhh-hhheeecCcccCchhHHHH--------hhCce-eeeeHHHHHHHHHHHhcccCceeEeecccce
Confidence 256788776 6789998765443211110 01111 235566666666666443 34555543211
Q ss_pred hhhhhhHHHHHHhccCCceeehHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhc----CCC--CcHHHHHHHHHH
Q 011536 180 VQTYTNLEAFQKADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHS----KSH--PYEGLLAAKFEY 253 (483)
Q Consensus 180 ~~~~~~~~~l~~~l~~~~~~d~~~~i~~lR~vKs~~EI~~mR~A~~i~~~a~~~~~~~~----~~G--~tE~el~a~~~~ 253 (483)
+ .+....+..........+..++++|.+.|++.||.|--.-+.|+.+.+..+ ..| +||.+++.+++.
T Consensus 283 ---~----~i~~~i~~~~~~~~~Spi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~ 355 (606)
T KOG2413|consen 283 ---Y----GIGELIGEDHSMIDPSPISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEE 355 (606)
T ss_pred ---e----eecccccccccccccCHHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHH
Confidence 1 122233333444455667899999999999999999877777777776543 456 899999999986
Q ss_pred H-HHHcCCCCCCCccEEEe-CCCCCcccccCC---CcccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHH
Q 011536 254 E-CKMRGAQRMAFNPVVGG-GPNAAVIHYSRN---DQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDL 328 (483)
Q Consensus 254 ~-~~~~G~~~~~~~~iVas-G~na~~~h~~~~---~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~ 328 (483)
. -+.++..+++|.+|+++ |+|++++||.|. ++.+.+..+.++|.|++|.--++|+||||++ |+||+++++.|..
T Consensus 356 fR~~~~~fmglSFeTIS~s~G~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~Hf-gePs~eek~~yT~ 434 (606)
T KOG2413|consen 356 FRSRQDHFMGLSFETISSSVGPNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHF-GEPTAEEKEAYTL 434 (606)
T ss_pred HHHhhccccCcCcceeeccCCCCceeeecCCCccccceecCceEEEEccCcccccCccceeEEEec-CCCCHHHHHHHHH
Confidence 5 45568888999999977 999999999995 5599999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHHHcCC-CCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEecc--CCcccCCCC------CC
Q 011536 329 ILQTNKECLELCMP-GTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLG--MDVHDSSVV------TY 399 (483)
Q Consensus 329 v~~~~~~~i~~~rp-G~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iG--l~~he~p~~------~~ 399 (483)
|++.+-+...+.-| |+....++..++..+++. | -.|.|.+|||+| |.+||.|.. ++
T Consensus 435 VLkGhi~la~~vFP~~t~g~~lD~laR~~LW~~----g-----------LDy~HgTGHGVG~fLnVhE~P~~is~r~~~~ 499 (606)
T KOG2413|consen 435 VLKGHIALARAVFPKGTKGSVLDALARSALWKA----G-----------LDYGHGTGHGVGSFLNVHEGPIGIGYRPYSS 499 (606)
T ss_pred HHHhhhHhhhcccCCCCCcchhHHHHHHHHHhh----c-----------cccCCCCCcccccceEeccCCceeeeeecCC
Confidence 99999999988887 888999999999999873 3 346799999999 779999953 25
Q ss_pred CCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcCCC----------eeeCCCCCCCCHHHHHHH
Q 011536 400 ERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITETG----------YEVLTGSLPKEIKHIESL 462 (483)
Q Consensus 400 ~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte~G----------~e~LT~~~p~e~~~Ie~~ 462 (483)
+..|++||++++|||.|-.+. ||+|||+.++|.+.+ .+.||- +|.+...|...
T Consensus 500 ~~~l~ag~~~s~EPGYY~dg~---------fGIRienv~~vvd~~~~~~~~~~L~fe~lT~-vP~q~klid~~ 562 (606)
T KOG2413|consen 500 NFPLQAGMVFSIEPGYYKDGE---------FGIRIENVVEVVDAGTKHNFRGFLTFEPLTL-VPYQTKLIDKS 562 (606)
T ss_pred CchhcCceEeccCCcccccCc---------ceEEEeeEEEEEeccccccccceeeecccee-cceecccCChh
Confidence 778999999999999998887 899999999887643 456775 78776665433
No 28
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.9e-34 Score=266.99 Aligned_cols=232 Identities=23% Similarity=0.325 Sum_probs=206.6
Q ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCC-----CCCccEEEeCCCCCcccccCC
Q 011536 209 RWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQR-----MAFNPVVGGGPNAAVIHYSRN 283 (483)
Q Consensus 209 R~vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~-----~~~~~iVasG~na~~~h~~~~ 283 (483)
-.|++++||+.||+|++++.+.+..+...++||+|-.||...+..+.+++||-. ..|+-.+++.-|-.+.|..|.
T Consensus 114 i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD 193 (369)
T KOG2738|consen 114 IKILDPEGIEGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPD 193 (369)
T ss_pred eeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCC
Confidence 358899999999999999999999999999999999999999999999999874 357778999999999999999
Q ss_pred CcccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHh
Q 011536 284 DQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKE 363 (483)
Q Consensus 284 ~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~ 363 (483)
.++|++||+|.||+...++||+.|+.+||+| |+.+++.+++-+...++.+.+|+.||||+++.+|-+.+.+...+
T Consensus 194 ~RpLedGDIvNiDVtvY~~GyHGDlneTffv-G~Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~---- 268 (369)
T KOG2738|consen 194 SRPLEDGDIVNIDVTVYLNGYHGDLNETFFV-GNVDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATK---- 268 (369)
T ss_pred cCcCCCCCEEeEEEEEEeccccCccccceEe-eccCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhh----
Confidence 9999999999999999999999999999998 99999999999999999999999999999999999977766544
Q ss_pred cCcccCCCCCCCCCCCCcceeEeccCCcccCCCCC---C---CCCcCCCCEEEecceeeeCC--CCCCCCcc------ce
Q 011536 364 IGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVT---Y---ERPLEPGVVITIEPGIYIPL--SFSGPERF------RG 429 (483)
Q Consensus 364 ~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p~~~---~---~~~L~~Gmv~tiEPgiy~p~--~~~~~~~~------~g 429 (483)
.|+. ....++|||||--+|-.|.+. + ..++++||+|||||.|.+.. +..||..| .+
T Consensus 269 ~g~s----------VVr~ycGHGig~~FH~~PnipHya~n~a~GvM~~G~tFTIEPmit~G~~~d~tWPD~WT~vTaDG~ 338 (369)
T KOG2738|consen 269 NGYS----------VVRSYCGHGIGRVFHCAPNIPHYAKNKAPGVMKPGQTFTIEPMITIGTWEDITWPDDWTAVTADGK 338 (369)
T ss_pred cCce----------eehhhhccccccccccCCCchhhcccCCcceeecCceEEeeeeecccccccccCCCCceEEecCCc
Confidence 5653 234678999999999999876 2 46899999999999998754 34788877 34
Q ss_pred eeEEEeEEEEEcCCCeeeCCCCCCCC
Q 011536 430 IGIRIEDEVLITETGYEVLTGSLPKE 455 (483)
Q Consensus 430 ~GvriED~vlVte~G~e~LT~~~p~e 455 (483)
...++|.|+|||++|+|+||+..|..
T Consensus 339 ~sAQFEhTlLVT~tG~EILT~r~~~~ 364 (369)
T KOG2738|consen 339 RSAQFEHTLLVTETGCEILTKRLPNS 364 (369)
T ss_pred eecceeeEEEEecccceehhcccCCC
Confidence 57999999999999999999865654
No 29
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.7e-33 Score=266.97 Aligned_cols=226 Identities=25% Similarity=0.290 Sum_probs=193.3
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCC-----CCCccEEEeCCCCCcccccCC-
Q 011536 210 WVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQR-----MAFNPVVGGGPNAAVIHYSRN- 283 (483)
Q Consensus 210 ~vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~-----~~~~~iVasG~na~~~h~~~~- 283 (483)
.+||++||+.||+|++|+.++++.+...++||+|-.||....+..++..|+-. ..|+--++..-|-..+|+.|+
T Consensus 4 ~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~HgiP~d 83 (255)
T COG0024 4 SIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVAHGIPGD 83 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheeeecCCCC
Confidence 38999999999999999999999999999999999999999999999754432 124344678889999999998
Q ss_pred CcccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCC-HHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHH
Q 011536 284 DQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFS-SLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLK 362 (483)
Q Consensus 284 ~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t-~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~ 362 (483)
+++|++||+|.||+|+.++||++|.++|+.| |+.+ +..++|.+++.++..++|+.+|||+++++|-++..+++.+
T Consensus 84 ~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~v-g~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~--- 159 (255)
T COG0024 84 KKVLKEGDIVKIDVGAHIDGYIGDTAITFVV-GEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAES--- 159 (255)
T ss_pred CcccCCCCEEEEEEEEEECCeeeeEEEEEEC-CCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH---
Confidence 5689999999999999999999999999999 7555 5777799999999999999999999999999988887763
Q ss_pred hcCcccCCCCCCCCCCCCcceeEeccCCcccCCCCCC------CCCcCCCCEEEecceeeeCC------C-CCC--CCcc
Q 011536 363 EIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTY------ERPLEPGVVITIEPGIYIPL------S-FSG--PERF 427 (483)
Q Consensus 363 ~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p~~~~------~~~L~~Gmv~tiEPgiy~p~------~-~~~--~~~~ 427 (483)
.||.+ ...++||++|..+|+.|.+.+ ..+|++||||+|||.+.... . ++| ....
T Consensus 160 -~G~~v----------Vr~~~GHgig~~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~~d~Wt~~t~d 228 (255)
T COG0024 160 -RGFSV----------VRNLTGHGIGRELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTGSGEVVEGPSDRWTLVTKD 228 (255)
T ss_pred -cCCEE----------eecccCCccCcccCCCCeeccccCCCCCcccCCCCEEEEeeEEEcCCCceEecCCCCeEEEeCC
Confidence 66643 235679999999999998863 36999999999999886532 1 233 4566
Q ss_pred ceeeEEEeEEEEEcCCCeeeCCC
Q 011536 428 RGIGIRIEDEVLITETGYEVLTG 450 (483)
Q Consensus 428 ~g~GvriED~vlVte~G~e~LT~ 450 (483)
++...+.|.||+||++|+++||.
T Consensus 229 ~~~~aq~EHTv~Vt~~g~eilT~ 251 (255)
T COG0024 229 GSLSAQFEHTVIVTEDGCEILTL 251 (255)
T ss_pred CCEEeEEEEEEEEeCCCcEEeeC
Confidence 78899999999999999999997
No 30
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-34 Score=295.31 Aligned_cols=367 Identities=20% Similarity=0.258 Sum_probs=270.9
Q ss_pred CCCCCCCCCCCceEEEeCCCCCCeEEEEEcCCcEEEEecCCCcccc-cc------cCcccccccccccccCccccchhhH
Q 011536 86 DVVPYPYRQDANYLYITGCQQPGGVAVLSHECGLCMFMPETSAHDV-IW------KGQIAGVDAAPETFKADKAYPMSKI 158 (483)
Q Consensus 86 ~d~~y~f~q~~n~~YLtG~~~p~~~lvi~~~~~~~l~v~~~~~~~~-~w------~g~~~~~~~~~~~~~~d~~~~~~~~ 158 (483)
.+++|. +...-|.||.||+.|++++|++++ ..++++..+.+..- .- .+..+.+.....--+.+....++.+
T Consensus 9 dd~~Y~-KssAL~~WLlGYEfpdTilv~~~~-~i~iltSkkKa~~l~~~~~~~~~~~~~~~v~llvR~k~d~n~~~fdki 86 (960)
T KOG1189|consen 9 DDNPYQ-KSSALFTWLLGYEFPDTILVLCKD-KIYILTSKKKAEFLQKVTNLAQSSEGKPTVNLLVRDKNDDNKGLFDKI 86 (960)
T ss_pred cccchh-HHHHHHHHHhccccCceEEEEecC-cEEEEecchhHHHHHhhcccccCcccCcceEEEecccCccccccHHHH
Confidence 466665 456778999999999999999987 45555554433211 10 0011111111110112222334444
Q ss_pred HhHHHHhhccCCceEecCccchhhhhhHHHHHHhcc--CCceeehHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH
Q 011536 159 QEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADF--YGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTML 236 (483)
Q Consensus 159 ~~~L~~~~~~~~~I~~d~~~~~~~~~~~~~l~~~l~--~~~~~d~~~~i~~lR~vKs~~EI~~mR~A~~i~~~a~~~~~~ 236 (483)
.++++. .+++||+- ........+...|...+. +.+.+|++-.+..+-+||++.||+.||+|+.++...|...+.
T Consensus 87 i~~ik~---~gk~vGvf-~ke~~~G~F~~~W~~~l~~~~fn~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~ 162 (960)
T KOG1189|consen 87 IKAIKS---AGKKVGVF-AKEKFQGEFMESWNKRLEAGGFNKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYLV 162 (960)
T ss_pred HHHHHh---cCCeeeee-cccccchhHHHHHHHHhhhcCCceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444 56788863 333455556666666554 456899999999999999999999999999999999986542
Q ss_pred -----hcCC--CCcHHHHHHHHHHHHHHc----CCC----CCCCccEEEeCCCCCc-ccccCCCcccCCCCeEEEeccce
Q 011536 237 -----HSKS--HPYEGLLAAKFEYECKMR----GAQ----RMAFNPVVGGGPNAAV-IHYSRNDQKIDDGDLVLMDVGCE 300 (483)
Q Consensus 237 -----~~~~--G~tE~el~a~~~~~~~~~----G~~----~~~~~~iVasG~na~~-~h~~~~~~~l~~Gd~vlvD~g~~ 300 (483)
.+-. -+|..-|...++..+... |.. .+.|+||++||.+..+ +...+++..| + .|+..+|.+
T Consensus 163 ~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~~~~d~cY~PIiqSGg~ydlk~sa~s~~~~L--~-~I~cs~G~R 239 (960)
T KOG1189|consen 163 DELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDPDLLDMCYPPIIQSGGKYDLKPSAVSDDNHL--H-VILCSLGIR 239 (960)
T ss_pred HHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCccccccccChhhhcCCccccccccccccccc--c-eEEeeccch
Confidence 2322 346666666666555432 322 3679999999999887 7777788888 3 899999999
Q ss_pred eCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCC
Q 011536 301 LHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNP 380 (483)
Q Consensus 301 ~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~ 380 (483)
|++|||+++||+.| .|+.+|.+.|+.++.+|++++.+||||+.+++||.++.+++.+... .+...++
T Consensus 240 ynsYCSNv~RT~Li--dpssemq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~P-----------el~~~~~ 306 (960)
T KOG1189|consen 240 YNSYCSNVSRTYLI--DPSSEMQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKP-----------ELVPNFT 306 (960)
T ss_pred hhhhhccccceeee--cchHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCc-----------chhhhhh
Confidence 99999999999998 8999999999999999999999999999999999999999987533 3445677
Q ss_pred cceeEeccCCcccCCCCC---CCCCcCCCCEEEecceee-eCCCCCCCCccceeeEEEeEEEEEcCCCe-eeCCCCCCCC
Q 011536 381 TSIGHYLGMDVHDSSVVT---YERPLEPGVVITIEPGIY-IPLSFSGPERFRGIGIRIEDEVLITETGY-EVLTGSLPKE 455 (483)
Q Consensus 381 h~~GH~iGl~~he~p~~~---~~~~L~~Gmv~tiEPgiy-~p~~~~~~~~~~g~GvriED~vlVte~G~-e~LT~~~p~e 455 (483)
..+|.+|||+++|...+- ++.+|++||||.|.-|+- +++. ..-+.+.+-|.|||+|+++++ ++||. ++|.
T Consensus 307 k~lG~~iGlEFREssl~inaKnd~~lk~gmvFni~lGf~nl~n~----~~~~~yaL~l~DTvlv~e~~p~~vLT~-~~K~ 381 (960)
T KOG1189|consen 307 KNLGFGIGLEFRESSLVINAKNDRVLKKGMVFNISLGFSNLTNP----ESKNSYALLLSDTVLVGEDPPAEVLTD-SAKA 381 (960)
T ss_pred hhcccccceeeecccccccccchhhhccCcEEEEeeccccccCc----ccccchhhhccceeeecCCCcchhhcc-cchh
Confidence 889999999999988754 589999999999998886 3332 222337899999999999998 99997 9999
Q ss_pred HHHHHHHHcCCCCCcccccccccc
Q 011536 456 IKHIESLLNNFSSETGRENHINAK 479 (483)
Q Consensus 456 ~~~Ie~~~~~~~~~~~~~~~~~~~ 479 (483)
..+|.....+..++...++.+.++
T Consensus 382 ~~dv~~~f~~eeeE~~~~~k~~~~ 405 (960)
T KOG1189|consen 382 VKDVSYFFKDEEEEEELEKKDPAT 405 (960)
T ss_pred hcccceeeccchhhhhhhhccccc
Confidence 999988887666665555554443
No 31
>PRK08671 methionine aminopeptidase; Provisional
Probab=100.00 E-value=2.6e-33 Score=277.12 Aligned_cols=180 Identities=24% Similarity=0.271 Sum_probs=160.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCccEEEeCCCCCcccccCC---CcccCCCCe
Q 011536 216 ELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRN---DQKIDDGDL 292 (483)
Q Consensus 216 EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~iVasG~na~~~h~~~~---~~~l~~Gd~ 292 (483)
+|+.||+|++|+.++++.+++.++||+||.||++.++..+.+.|+. ++|++.|+.|.+ .+||+|+ ++.|++||+
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~-~afp~~vs~n~~--~~H~~p~~~d~~~l~~GDv 77 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAK-PAFPCNISINEV--AAHYTPSPGDERVFPEGDV 77 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCc-cCCCCEEeeCCC--ccCCCCCCCCCcccCCCCE
Confidence 5899999999999999999999999999999999999999999975 689988887665 4799986 678999999
Q ss_pred EEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCC
Q 011536 293 VLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGT 372 (483)
Q Consensus 293 vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~ 372 (483)
|.+|+|+.|+||++|++||+++ | +.++++|+++.++++++++.+|||++++||++++++.+.+ +|+.
T Consensus 78 V~iD~G~~~dGY~aD~arT~~v-G---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~----~G~~----- 144 (291)
T PRK08671 78 VKLDLGAHVDGYIADTAVTVDL-G---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRS----YGFK----- 144 (291)
T ss_pred EEEEEeEEECCEEEEEEEEEEe-C---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH----cCCc-----
Confidence 9999999999999999999998 5 4788999999999999999999999999999998888876 5542
Q ss_pred CCCCCCCCcceeEeccC-CcccCCCCC-----CCCCcCCCCEEEecceee
Q 011536 373 DPYNELNPTSIGHYLGM-DVHDSSVVT-----YERPLEPGVVITIEPGIY 416 (483)
Q Consensus 373 ~~~~~~~~h~~GH~iGl-~~he~p~~~-----~~~~L~~Gmv~tiEPgiy 416 (483)
. +.|.+||+||+ .+|+.|.++ .+.+|++||||+|||.+.
T Consensus 145 ----~-~~~~~GHgiG~~~~he~p~ip~~~~~~~~~le~GmV~aIEp~~t 189 (291)
T PRK08671 145 ----P-IRNLTGHGLERYELHAGPSIPNYDEGGGVKLEEGDVYAIEPFAT 189 (291)
T ss_pred ----c-cCCCcccCcCCCcccCCCccCccCCCCCceeCCCCEEEEcceEE
Confidence 2 35889999996 899998764 368999999999999753
No 32
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=100.00 E-value=1.3e-32 Score=272.21 Aligned_cols=181 Identities=19% Similarity=0.227 Sum_probs=159.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCccEEEeCCCCCcccccCC---CcccCCC
Q 011536 214 PAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRN---DQKIDDG 290 (483)
Q Consensus 214 ~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~iVasG~na~~~h~~~~---~~~l~~G 290 (483)
-+||+.||+|++|++++++.+++.++||++|.||++.++..+.+.|++ ++|+++|+ .|...+||+|+ ++.|++|
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~-~aFp~~vs--~n~~~~H~~p~~~d~~~l~~G 78 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAE-PAFPCNIS--INECAAHFTPKAGDKTVFKDG 78 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCC-CCCCccee--cCCEeeCCCCCCCcCccCCCC
Confidence 378999999999999999999999999999999999999999999988 68998876 46667899996 5789999
Q ss_pred CeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCC
Q 011536 291 DLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSD 370 (483)
Q Consensus 291 d~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~ 370 (483)
|+|++|+|+.++||++|++||+++ |+ .++++|+++.++++++++++|||++++||++++++.+.+ +|+
T Consensus 79 DvV~iD~G~~~dGY~aD~arT~~v-G~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~----~G~---- 146 (295)
T TIGR00501 79 DVVKLDLGAHVDGYIADTAITVDL-GD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIES----YGV---- 146 (295)
T ss_pred CEEEEEEeEEECCEEEEEEEEEEe-Cc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH----cCC----
Confidence 999999999999999999999998 53 368999999999999999999999999999999998876 454
Q ss_pred CCCCCCCCCCcceeEecc-CCcccCCCC---C--CCCCcCCCCEEEeccee
Q 011536 371 GTDPYNELNPTSIGHYLG-MDVHDSSVV---T--YERPLEPGVVITIEPGI 415 (483)
Q Consensus 371 ~~~~~~~~~~h~~GH~iG-l~~he~p~~---~--~~~~L~~Gmv~tiEPgi 415 (483)
.. +.|.+||++| +.+|+.+.+ . .+.+|++||||+|||.+
T Consensus 147 -----~~-i~~~~GHgig~~~~h~g~~ip~i~~~~~~~le~GmV~aIEP~~ 191 (295)
T TIGR00501 147 -----KP-ISNLTGHSMAPYRLHGGKSIPNVKERDTTKLEEGDVVAIEPFA 191 (295)
T ss_pred -----ee-ecCCCCcceecccccCCCccCeecCCCCCEeCCCCEEEEceeE
Confidence 33 3588999999 578876433 2 46799999999999954
No 33
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=100.00 E-value=2e-32 Score=280.66 Aligned_cols=196 Identities=16% Similarity=0.121 Sum_probs=165.8
Q ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHc----CC-CCCCCccEEEeCCCCCcccccCC
Q 011536 209 RWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMR----GA-QRMAFNPVVGGGPNAAVIHYSRN 283 (483)
Q Consensus 209 R~vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~----G~-~~~~~~~iVasG~na~~~h~~~~ 283 (483)
+..+|++||+.||+|++|+.+++..+...++||+||.||++.++..+++. |+ .+++|++.+ +.|...+|++|+
T Consensus 150 ~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g~aFPt~v--S~N~~aaH~tP~ 227 (470)
T PTZ00053 150 LEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCGWAFPTGC--SLNHCAAHYTPN 227 (470)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcccCCCCcee--ecCccccCCCCC
Confidence 34589999999999999999999999999999999999999998876543 66 367898855 578888999997
Q ss_pred ---CcccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHH
Q 011536 284 ---DQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKG 360 (483)
Q Consensus 284 ---~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~ 360 (483)
+++|+.||+|.||+|+.|+||++|++||+.+ | ++++++|+++.+|++++|+.++||++++||.+++++.+.+
T Consensus 228 ~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~v-g---~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies- 302 (470)
T PTZ00053 228 TGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAF-N---PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIES- 302 (470)
T ss_pred CCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEe-C---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH-
Confidence 6789999999999999999999999999987 4 6889999999999999999999999999999999998876
Q ss_pred HHhcCcccCCCCCCC-CCCCCcceeEeccC-CcccC---CCCC--CCCCcCCCCEEEecceee
Q 011536 361 LKEIGIVNSDGTDPY-NELNPTSIGHYLGM-DVHDS---SVVT--YERPLEPGVVITIEPGIY 416 (483)
Q Consensus 361 l~~~G~~~~~~~~~~-~~~~~h~~GH~iGl-~~he~---p~~~--~~~~L~~Gmv~tiEPgiy 416 (483)
+|+..... -| -+.+.|.+||+||+ .+|+. |.+. ...+|++||||+|||.+.
T Consensus 303 ---~G~e~~Gk--~f~~k~I~nltGHgIG~y~iHe~k~iP~v~~~~~~~LeeGmVfaIEPf~s 360 (470)
T PTZ00053 303 ---YEVEIKGK--TYPIKSIRNLNGHSIGPYIIHGGKSVPIVKGGENTRMEEGELFAIETFAS 360 (470)
T ss_pred ---cCCcccCc--ccccccccCCcccCCCCccccCCCcCCeeCCCCCCEecCCCEEEEcceee
Confidence 55521110 00 12347999999997 89984 4443 468999999999999654
No 34
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=5.9e-32 Score=267.43 Aligned_cols=178 Identities=22% Similarity=0.225 Sum_probs=157.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCccEEEeCCCCCcccccCCC---cccCCCCeE
Q 011536 217 LKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRND---QKIDDGDLV 293 (483)
Q Consensus 217 I~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~iVasG~na~~~h~~~~~---~~l~~Gd~v 293 (483)
++.||+|++|+.++++++++.++||+||.||++.+++.+.+.|+. ++|++. .+.|...+||.|+. +.|++||+|
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~-~afp~~--is~n~~~~H~~p~~~d~~~l~~GDvV 77 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAG-PAFPVN--LSINECAAHYTPNAGDDTVLKEGDVV 77 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC-CCCCce--eccCCEeeCCCCCCCCCcccCCCCEE
Confidence 368999999999999999999999999999999999999999974 688765 45777789999964 789999999
Q ss_pred EEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCC
Q 011536 294 LMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTD 373 (483)
Q Consensus 294 lvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~ 373 (483)
.+|+|+.|+||++|++||+++ |+ .++++|++++++++++++++|||++++||++++++.+.+ +|+.
T Consensus 78 ~iD~G~~~dGY~sD~arT~~v-g~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~----~G~~------ 143 (291)
T cd01088 78 KLDFGAHVDGYIADSAFTVDF-DP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIES----YGFK------ 143 (291)
T ss_pred EEEEEEEECCEEEEEEEEEec-Ch---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH----cCCE------
Confidence 999999999999999999998 53 788999999999999999999999999999999988876 4543
Q ss_pred CCCCCCCcceeEecc-CCcccCCCCC-----CCCCcCCCCEEEeccee
Q 011536 374 PYNELNPTSIGHYLG-MDVHDSSVVT-----YERPLEPGVVITIEPGI 415 (483)
Q Consensus 374 ~~~~~~~h~~GH~iG-l~~he~p~~~-----~~~~L~~Gmv~tiEPgi 415 (483)
. ..|.+||+|| +.+|+.|.++ .+.+|++||||+|||.+
T Consensus 144 ---~-~~~~~GHgig~~~~h~~~~ip~~~~~~~~~le~gmV~aIEp~~ 187 (291)
T cd01088 144 ---P-IRNLTGHSIERYRLHAGKSIPNVKGGEGTRLEEGDVYAIEPFA 187 (291)
T ss_pred ---E-eecCCccCccCccccCCCccCccCCCCCCEeCCCCEEEEceeE
Confidence 2 3588999999 5888876543 46899999999999955
No 35
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=100.00 E-value=1.7e-31 Score=272.45 Aligned_cols=192 Identities=17% Similarity=0.234 Sum_probs=166.7
Q ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHc----------CCCCCCCccEEEeCCCCCcc
Q 011536 209 RWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMR----------GAQRMAFNPVVGGGPNAAVI 278 (483)
Q Consensus 209 R~vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~----------G~~~~~~~~iVasG~na~~~ 278 (483)
-.+|+++||+.||+|++|+.+++..+++.++||+||.||+...+..+.+. |..+++|++.|+ .|...+
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vS--vN~~v~ 88 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCIS--VNNCVG 88 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEe--cCCeee
Confidence 36999999999999999999999999999999999999999887777653 356778988776 788889
Q ss_pred cccC--C--CcccCCCCeEEEeccceeCCeEeeeeEeeeCCCC-----CCHHHHHHHHHHHHHHHHHHHHcCCCCChHHH
Q 011536 279 HYSR--N--DQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGS-----FSSLEEALYDLILQTNKECLELCMPGTSLLQI 349 (483)
Q Consensus 279 h~~~--~--~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~-----~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i 349 (483)
||.| + ++.|++||+|.||+|+.++||++|++||++| |+ ++++++++++++.+|++++++++|||++++||
T Consensus 89 H~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~v-G~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~dI 167 (389)
T TIGR00495 89 HFSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVV-GVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQV 167 (389)
T ss_pred CCCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEE-CCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHH
Confidence 9999 2 4789999999999999999999999999999 53 67899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccCCccc-CCCC-CC----------CCCcCCCCEEEecceeee
Q 011536 350 HHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHD-SSVV-TY----------ERPLEPGVVITIEPGIYI 417 (483)
Q Consensus 350 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he-~p~~-~~----------~~~L~~Gmv~tiEPgiy~ 417 (483)
..++++++.+ +|+. ...+.+||+||-.+|| .|.+ .+ ...|++||||+|||.+..
T Consensus 168 ~~ai~~v~~~----~G~~----------~v~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs~ 233 (389)
T TIGR00495 168 TEAINKVAHS----YGCT----------PVEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVST 233 (389)
T ss_pred HHHHHHHHHH----cCCe----------ecCCceeecccceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeecC
Confidence 9999888876 5653 2356789999999998 6653 21 357999999999997653
No 36
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.93 E-value=2.9e-25 Score=225.04 Aligned_cols=384 Identities=18% Similarity=0.187 Sum_probs=257.3
Q ss_pred CCHHHHHHHHHHHHHhCCCC-----cEEEEecCCcccccCC-CCCCCCCCCceEEEeCCCCCCeEEEEEcCCcEEEEecC
Q 011536 52 ISAEEYISRRKRLLEILPEN-----SVAILAAAPEKMMTDV-VPYPYRQDANYLYITGCQQPGGVAVLSHECGLCMFMPE 125 (483)
Q Consensus 52 is~~ey~~R~~rL~~~m~~~-----~l~il~~~~~~~~~~d-~~y~f~q~~n~~YLtG~~~p~~~lvi~~~~~~~l~v~~ 125 (483)
|.-+.|+.|..-|+..+.+. ++.+++|. ++| .+|. ....-+.||.||+.|.+++++.+- ...+.+..
T Consensus 6 ide~~F~kR~~~l~~~~ne~dG~p~sllv~lG~-----s~d~npyq-k~taLh~wLLgYEFP~Tli~l~~~-~~~I~ts~ 78 (1001)
T COG5406 6 IDEERFEKRSRDLRKHLNEEDGGPDSLLVMLGK-----SQDVNPYQ-KNTALHIWLLGYEFPETLIILDDV-CTAITTSK 78 (1001)
T ss_pred ccHHHHHHHHHHHHHhhhhccCCCceEEEEecc-----ccccChhh-hhhHHHHHHHhccCcceEEEEecc-eEEEEech
Confidence 55678999999999999432 34566664 223 2443 234456899999999987777653 45555554
Q ss_pred CCcccc---cccCcccccccccccccCccccchhhHHhHHHHh---h-ccCCceEecCccchhhhhhHHHHHHhc----c
Q 011536 126 TSAHDV---IWKGQIAGVDAAPETFKADKAYPMSKIQEILPDM---I-GRSSKLFHNQETAVQTYTNLEAFQKAD----F 194 (483)
Q Consensus 126 ~~~~~~---~w~g~~~~~~~~~~~~~~d~~~~~~~~~~~L~~~---~-~~~~~I~~d~~~~~~~~~~~~~l~~~l----~ 194 (483)
+.+... +.+.....+ ....++. ....+...++.+.. + ..++.||. +..+.....+...|...+ .
T Consensus 79 ~kA~~lqk~l~~~~~~~v--~~n~~~r--~k~~eenkKlF~~~i~~i~s~~k~VG~-f~kD~~qgkfi~ew~~i~e~vk~ 153 (1001)
T COG5406 79 KKAILLQKGLAETSLNIV--VRNKDNR--TKNMEENKKLFKGSIYVIGSENKIVGD-FCKDVLQGKFINEWDSIFEPVKS 153 (1001)
T ss_pred hhHHHHHhhhccCcchhh--hhhhhhc--ccCHHHHHHHHhhhheecccCCcccCc-cchhhhhcccccccchhhhhhhh
Confidence 433221 111110000 0111111 12233333333332 2 23456664 332222222221111111 1
Q ss_pred CCceeehHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH---HHhcCCC---CcHHHHHHHHHH-----HHHH-----c
Q 011536 195 YGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQT---MLHSKSH---PYEGLLAAKFEY-----ECKM-----R 258 (483)
Q Consensus 195 ~~~~~d~~~~i~~lR~vKs~~EI~~mR~A~~i~~~a~~~~---~~~~~~G---~tE~el~a~~~~-----~~~~-----~ 258 (483)
..+.+|++.-+..+-.+|+.+||+.+|.+++.++..|... |..+-.| +|...+...++. ++.+ .
T Consensus 154 efN~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l 233 (1001)
T COG5406 154 EFNASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKL 233 (1001)
T ss_pred hcchhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCccc
Confidence 3467888999999999999999999999999999888733 2221111 122223333322 1111 1
Q ss_pred CC-----CCCCCccEEEeCCCCCc-ccccCCCcccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHH
Q 011536 259 GA-----QRMAFNPVVGGGPNAAV-IHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQT 332 (483)
Q Consensus 259 G~-----~~~~~~~iVasG~na~~-~h~~~~~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~ 332 (483)
|- -.+.|.||++||....+ +...+.++.+. ||.|+..+|.+|+||||+++||+.+ .|+.+|.+-|+.++.+
T Consensus 234 ~~~~~d~lew~ytpiiqsg~~~Dl~psa~s~~~~l~-gd~vl~s~GiRYn~YCSn~~RT~l~--dp~~e~~~Ny~fl~~l 310 (1001)
T COG5406 234 GDIDLDQLEWCYTPIIQSGGSIDLTPSAFSFPMELT-GDVVLLSIGIRYNGYCSNMSRTILT--DPDSEQQKNYEFLYML 310 (1001)
T ss_pred cccchhhhhhhcchhhccCceeecccccccCchhhc-CceEEEEeeeeeccccccccceEEe--CCchHhhhhHHHHHHH
Confidence 10 12468999999988766 66666666665 7899999999999999999999987 8999999999999999
Q ss_pred HHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccCCcccCCCCC---CCCCcCCCCEE
Q 011536 333 NKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVT---YERPLEPGVVI 409 (483)
Q Consensus 333 ~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p~~~---~~~~L~~Gmv~ 409 (483)
|+..+..||||...++||..+.+++.+... .+...|...+|-+||++.++...+- ++++|+.||+|
T Consensus 311 Qk~i~~~~rpG~~~g~iY~~~~~yi~~~~p-----------el~pnF~~nvG~~igiefR~s~~~~nvkn~r~lq~g~~f 379 (1001)
T COG5406 311 QKYILGLVRPGTDSGIIYSEAEKYISSNGP-----------ELGPNFIYNVGLMIGIEFRSSQKPFNVKNGRVLQAGCIF 379 (1001)
T ss_pred HHHHHhhcCCCCCchhHHHHHHHHHHhcCC-----------ccCchHhhhhhhhccccccccccceeccCCceeccccEE
Confidence 999999999999999999999999877432 3456788899999999999876543 68999999999
Q ss_pred Eecceee-eCCCCCCCCccceeeEEEeEEEEEcCCCeeeCCCCCCCCHHHHHHHHcCC
Q 011536 410 TIEPGIY-IPLSFSGPERFRGIGIRIEDEVLITETGYEVLTGSLPKEIKHIESLLNNF 466 (483)
Q Consensus 410 tiEPgiy-~p~~~~~~~~~~g~GvriED~vlVte~G~e~LT~~~p~e~~~Ie~~~~~~ 466 (483)
.|.-|+- +-+ |---.++...+-||+-|+-+.+.++|. .||---+|..++.+.
T Consensus 380 nis~gf~nl~~----~~~~Nnyal~l~dt~qi~ls~p~~~t~-~~kaq~~isf~fged 432 (1001)
T COG5406 380 NISLGFGNLIN----PHPKNNYALLLIDTEQISLSNPIVFTD-SPKAQGDISFLFGED 432 (1001)
T ss_pred EEeecccccCC----CCcccchhhhhccceEeecCCceeccc-CcccccceeEEecCC
Confidence 9988774 111 111234788999999999999999997 899998888887643
No 37
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=99.85 E-value=2.1e-22 Score=176.13 Aligned_cols=126 Identities=38% Similarity=0.739 Sum_probs=96.4
Q ss_pred CCHHHHHHHHHHHHHhCCCCcEEEEecCCcccccCCCCCCCCCCCceEEEeCCCCCCeEEEE-EcC-CcEEEEecCCCcc
Q 011536 52 ISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVL-SHE-CGLCMFMPETSAH 129 (483)
Q Consensus 52 is~~ey~~R~~rL~~~m~~~~l~il~~~~~~~~~~d~~y~f~q~~n~~YLtG~~~p~~~lvi-~~~-~~~~l~v~~~~~~ 129 (483)
||+++|.+||++|.+.|++++++++.+++..++++|++|+|||++||+||||+++|++++|+ ..+ ++.+||+|+.++.
T Consensus 1 i~~~~~~~RR~~l~~~l~~~~~vil~~~~~~~~~~D~~y~FrQ~s~F~YLTG~~ep~~~lvl~~~~~~~~~LF~~~~d~~ 80 (134)
T PF05195_consen 1 IPAEEYAERRKKLAEKLPDNSIVILPGGPEKYRSNDIEYPFRQDSNFYYLTGFNEPDAVLVLKDGESGKSTLFVPPKDPD 80 (134)
T ss_dssp -EHHHHHHHHHHHHHHSHSSEEEEEE----EEEETTEEE-----HHHHHHH---STT-EEEEEECTTEEEEEEE----CC
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEECCCeeeecCCCccccccCCcEEEEeCCCCCCEEEEEecCCCCeEEEEeCCCCcC
Confidence 57899999999999999999999999999999999999999999999999999999999999 432 5799999999999
Q ss_pred cccccCcccccccccccccCccccchhhHHhHHHHhhccCCceEecCc
Q 011536 130 DVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQE 177 (483)
Q Consensus 130 ~~~w~g~~~~~~~~~~~~~~d~~~~~~~~~~~L~~~~~~~~~I~~d~~ 177 (483)
.++|.|.+.+.+.+...+++|++.+.+++.+.|.+++.+...++++..
T Consensus 81 ~e~W~G~~~~~e~a~~~~gvd~v~~~~~l~~~l~~~~~~~~~~~~~~~ 128 (134)
T PF05195_consen 81 DEIWDGPRPGPEEAKEIYGVDEVYYIDELEEVLSELLKRSRTVYYDLG 128 (134)
T ss_dssp GHHCCSS--HHHHHHHHHT-SEEEEGGGHHHHHHHHHTTTSCEEE-TT
T ss_pred ccEECccCCCHHHHHHHhCCCEEEEHHHHHHHHHHHHcCCCEEEEECC
Confidence 999999999999999999999999999999999999888777888764
No 38
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.11 E-value=1.5e-09 Score=103.06 Aligned_cols=189 Identities=16% Similarity=0.144 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH----HcCCC-CCCCccEEEeCCCCCcccccCCCc---
Q 011536 214 PAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECK----MRGAQ-RMAFNPVVGGGPNAAVIHYSRNDQ--- 285 (483)
Q Consensus 214 ~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~----~~G~~-~~~~~~iVasG~na~~~h~~~~~~--- 285 (483)
.....-+|+|+.+..++-..+...++|||+-.||...++..-+ ++|.. +.+||+ ...-|.+-.||+||..
T Consensus 82 ~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aGi~FPt--G~SlN~cAAHyTpNaGd~t 159 (397)
T KOG2775|consen 82 SDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAGIGFPT--GCSLNHCAAHYTPNAGDKT 159 (397)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccccccccCCC--cccccchhhhcCCCCCCce
Confidence 4456678999999999999999999999999999999986544 34433 467875 4446667789999743
Q ss_pred ccCCCCeEEEeccceeCCeEeeeeEeeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcC
Q 011536 286 KIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIG 365 (483)
Q Consensus 286 ~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G 365 (483)
+|+.+|++.||+|...+|-.-|.+-|+.+ .+..-.+..++.++-..+|+.+-..+++.||-+++.+++...--+.+
T Consensus 160 VLqydDV~KiDfGthi~GrIiDsAFTv~F----~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVmeSyEvEi~ 235 (397)
T KOG2775|consen 160 VLKYDDVMKIDFGTHIDGRIIDSAFTVAF----NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESYEVEIN 235 (397)
T ss_pred eeeecceEEEeccccccCeEeeeeeEEee----CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhhheEEEeC
Confidence 79999999999999999999999999876 44445688999999999999999999999999999988876322221
Q ss_pred cccCCCCCCCCCCCCcceeEecc-CCcccCCCCC-----CCCCcCCCCEEEecc
Q 011536 366 IVNSDGTDPYNELNPTSIGHYLG-MDVHDSSVVT-----YERPLEPGVVITIEP 413 (483)
Q Consensus 366 ~~~~~~~~~~~~~~~h~~GH~iG-l~~he~p~~~-----~~~~L~~Gmv~tiEP 413 (483)
=.... -+-...-.||+|+ ..+|-.-.++ ..+.+++|..++||.
T Consensus 236 Gk~~~-----VKpIrnLnGHSI~~yrIH~gksVPiVkgge~trmee~e~yAIET 284 (397)
T KOG2775|consen 236 GKTYQ-----VKPIRNLNGHSIAQYRIHGGKSVPIVKGGEQTRMEEGEIYAIET 284 (397)
T ss_pred Cceec-----ceeccccCCCcccceEeecCcccceecCCcceeecCCeeEEEEe
Confidence 11100 1122344678887 3466544443 478999999999995
No 39
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=99.11 E-value=5.6e-11 Score=103.28 Aligned_cols=127 Identities=19% Similarity=0.269 Sum_probs=89.4
Q ss_pred HHHHHHHhCCCCcEE-EEecCCcccccCCCCCCCCCCCceEEEeCC---CCCCeEEE-EEcCCcEEEEecCCCccccccc
Q 011536 60 RRKRLLEILPENSVA-ILAAAPEKMMTDVVPYPYRQDANYLYITGC---QQPGGVAV-LSHECGLCMFMPETSAHDVIWK 134 (483)
Q Consensus 60 R~~rL~~~m~~~~l~-il~~~~~~~~~~d~~y~f~q~~n~~YLtG~---~~p~~~lv-i~~~~~~~l~v~~~~~~~~~w~ 134 (483)
|++||++.|+++|++ +++. .+.|++||||| .....+++ +++++. ++|++..+..... .
T Consensus 1 Rl~rl~~~m~~~gid~lll~---------------~~~ni~YltG~~~~~~~~~~~l~i~~~~~-~l~~~~~~~~~~~-~ 63 (132)
T PF01321_consen 1 RLERLRAAMAEAGIDALLLT---------------SPENIRYLTGFRWQPGERPVLLVITADGA-VLFVPKGEYERAA-E 63 (132)
T ss_dssp HHHHHHHHHHHTT-SEEEEE---------------SHHHHHHHHS--ST-TSSEEEEEEESSSE-EEEEEGGGHHHHH-H
T ss_pred CHHHHHHHHHHCCCCEEEEc---------------ChhhceEecCCCcCCCcceEEEEecccCc-EEEeccccHHHHH-H
Confidence 899999999999994 5554 35899999999 55556665 788877 8899754332110 0
Q ss_pred CcccccccccccccCccccchhhHHhHHHHhhccCCceEecCccchhhhhhHHHHHHhccCCceeehHHHHHHhhcc
Q 011536 135 GQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNLSRLTHELRWV 211 (483)
Q Consensus 135 g~~~~~~~~~~~~~~d~~~~~~~~~~~L~~~~~~~~~I~~d~~~~~~~~~~~~~l~~~l~~~~~~d~~~~i~~lR~v 211 (483)
.. ....++...+ .+.+.+.+.|++++...++||+|.+. .++..++.+++.+|+.+++++++++.++|+|
T Consensus 64 ~~----~~~~~v~~~~--~~~~~~~~~l~~~~~~~~~igve~~~--~~~~~~~~l~~~~~~~~~v~~~~~i~~~R~I 132 (132)
T PF01321_consen 64 ES----APDDEVVEYE--DPYEAIAEALKKLGPEGKRIGVEPDS--LSAAEYQRLQEALPGAEFVDASPLIEELRMI 132 (132)
T ss_dssp HH----TTSSEEEEES--THHHHHHHHHHHHTTTTSEEEEETTT--SBHHHHHHHHHHSTTSEEEEEHHHHHHHHTS
T ss_pred hh----cCCceEEEEe--cccchHHHHHHHhCCCCCEEEEcCCc--ChHHHHHHHHHhCCCCEEEEcHHHHHHcCcC
Confidence 00 0001111111 14678888999987777999998763 6777888999999999999999999999987
No 40
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=98.99 E-value=7.4e-09 Score=100.88 Aligned_cols=147 Identities=16% Similarity=0.212 Sum_probs=122.5
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHc----------CCCCCCCccEEEeCCCCCccc
Q 011536 210 WVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMR----------GAQRMAFNPVVGGGPNAAVIH 279 (483)
Q Consensus 210 ~vKs~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~----------G~~~~~~~~iVasG~na~~~h 279 (483)
.+-++.-+..+|.|++|+..++..+.+.+.||.+-.||...-+..+... --.+.+||+-+. .|-+..|
T Consensus 14 tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Is--vnncv~h 91 (398)
T KOG2776|consen 14 TIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSIS--VNNCVCH 91 (398)
T ss_pred ccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceec--ccceeec
Confidence 4556777889999999999999999999999999999987765544321 122468887544 5667789
Q ss_pred ccC----CCcccCCCCeEEEeccceeCCeEeeeeEeeeCCCC-----CCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHH
Q 011536 280 YSR----NDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGS-----FSSLEEALYDLILQTNKECLELCMPGTSLLQIH 350 (483)
Q Consensus 280 ~~~----~~~~l~~Gd~vlvD~g~~~~GY~sDitRT~~v~G~-----~t~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~ 350 (483)
+.| .+..|++||+|.||+|+..+||.+.++.|++| +. .+....++..+...|.++++.+++||.+-..|-
T Consensus 92 ~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV-~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~vT 170 (398)
T KOG2776|consen 92 FSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVV-GPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQVT 170 (398)
T ss_pred cCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEe-ccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchhh
Confidence 988 25689999999999999999999999999988 33 457788999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 011536 351 HYSVGMLRK 359 (483)
Q Consensus 351 ~~~~~~l~~ 359 (483)
+++.+.+..
T Consensus 171 ~~i~k~aas 179 (398)
T KOG2776|consen 171 RAIVKTAAS 179 (398)
T ss_pred HHHHHHHHH
Confidence 988887765
No 41
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A.
Probab=98.15 E-value=2.6e-06 Score=76.85 Aligned_cols=144 Identities=15% Similarity=0.151 Sum_probs=82.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCc---------EEEEecCCcccccCCCCCCCCCCCceEEEeCCCCCCeEEEEEcCCcEEEE
Q 011536 52 ISAEEYISRRKRLLEILPENS---------VAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHECGLCMF 122 (483)
Q Consensus 52 is~~ey~~R~~rL~~~m~~~~---------l~il~~~~~~~~~~d~~y~f~q~~n~~YLtG~~~p~~~lvi~~~~~~~l~ 122 (483)
|..+.|.+|+++|++.|++.. +++++|. .+++.+|. ++..-+.||.||+.|+++++++++ .++++
T Consensus 1 iD~~~F~~RL~~L~~~W~~~~~~~~~~~dal~i~~G~----~~e~~~Y~-Ks~aLq~WLlGYEfpdTiiv~tk~-~i~~l 74 (163)
T PF14826_consen 1 IDKETFHKRLKRLYSSWKEHKDDLWGGADALVIAVGK----ADEDNPYS-KSTALQTWLLGYEFPDTIIVFTKK-KIHFL 74 (163)
T ss_dssp --HHHHHHHHHHHHHHHHCCCHHTSTT-SEEEEEE-S------TTSTT--HHHHHHHHHHSS--SSEEEEEETT-EEEEE
T ss_pred CCHHHHHHHHHHHHHHHhccCccccCCCCEEEEEeCC----cccCccch-hHHHHHHHHhcccHhhhhhhhcCC-EEEEE
Confidence 456789999999999997764 3455554 35667775 566778999999999999999987 78888
Q ss_pred ecCCCccc-cccc-----Cccccccccccccc-CccccchhhHHhHHHHhhccCCceEecCccchhhhhhHHHHHHhcc-
Q 011536 123 MPETSAHD-VIWK-----GQIAGVDAAPETFK-ADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADF- 194 (483)
Q Consensus 123 v~~~~~~~-~~w~-----g~~~~~~~~~~~~~-~d~~~~~~~~~~~L~~~~~~~~~I~~d~~~~~~~~~~~~~l~~~l~- 194 (483)
+..+.... +.-. +....++.. +-+ .|...+-+.+.+.+..+-..+++||+-.. ......+.+.+.+.+.
T Consensus 75 tS~KKa~~L~~l~~~~~~~~~~~v~ll--~R~k~d~~~~~~~f~kl~~~ik~~g~~vG~~~K-d~~~G~f~~~w~~~l~~ 151 (163)
T PF14826_consen 75 TSKKKAKFLEPLKKPAKEGGSIPVELL--VRNKKDPEKNKANFEKLIEAIKKAGKKVGVLAK-DKFEGKFVDEWKEALKK 151 (163)
T ss_dssp EEHHHHHCCCCHCCCTTTT-SSEEEEE--EE-TT-HHHHHHHHHHHHHHHHCCTSEEEE-TT-----SHHHHHHHHHHCH
T ss_pred eCHHHHHHHHHHhhccccCCCceEEEE--EeCCCCccchHHHHHHHHHHHHhcCCeEeEecC-CCCCCchHHHHHHHHhh
Confidence 87654321 1111 111111111 111 22223344566655555446788997433 3456667777777665
Q ss_pred -CCceeehHHH
Q 011536 195 -YGAVRNLSRL 204 (483)
Q Consensus 195 -~~~~~d~~~~ 204 (483)
+.+.+|++.-
T Consensus 152 ~~~~~vDvs~~ 162 (163)
T PF14826_consen 152 SGFEKVDVSSG 162 (163)
T ss_dssp HCSEEEE-HHH
T ss_pred cCCceeeccCC
Confidence 3578888754
No 42
>PLN03158 methionine aminopeptidase; Provisional
Probab=97.18 E-value=0.0031 Score=65.10 Aligned_cols=120 Identities=13% Similarity=0.086 Sum_probs=79.8
Q ss_pred CeEeeeeEeeeCCCCCC--HHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCC
Q 011536 303 GYVSDMTRTWPPCGSFS--SLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNP 380 (483)
Q Consensus 303 GY~sDitRT~~v~G~~t--~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~ 380 (483)
...+++.|+..| ..+. +.+|++-+.+.++++++.+.++||++-.||+.++++.+.+ .|..+... +| ..||
T Consensus 126 ~~~~~~~~~~~I-Ksp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~----~Ga~ps~l--~y-~~fp 197 (396)
T PLN03158 126 EPNSDLQHSVEI-KTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIA----AGGYPSPL--NY-HFFP 197 (396)
T ss_pred ccccccccceee-CCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHH----cCCccccc--cc-cCCC
Confidence 345677777777 4444 5567888888999999999999999999999988777654 34221110 01 1133
Q ss_pred cceeEeccCCcccCCCCCCCCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcC
Q 011536 381 TSIGHYLGMDVHDSSVVTYERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 442 (483)
Q Consensus 381 h~~GH~iGl~~he~p~~~~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte 442 (483)
..+ ..|+.---.-.++++.+|++|+++.|+.+.++.+ +-.-+..|++|++
T Consensus 198 ~sv--cts~N~~i~Hgip~~r~L~~GDiV~iDvg~~~~G----------Y~aD~tRT~~VG~ 247 (396)
T PLN03158 198 KSC--CTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKG----------CHGDLNETFFVGN 247 (396)
T ss_pred cee--eecccccccCCCCCCccCCCCCEEEEEEeEEECC----------EEEeEEeEEEcCC
Confidence 222 1222210011233678999999999999998754 5668899999975
No 43
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.07 E-value=0.0097 Score=57.15 Aligned_cols=103 Identities=14% Similarity=0.139 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccCCcccCC-CCC
Q 011536 320 SLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSS-VVT 398 (483)
Q Consensus 320 ~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p-~~~ 398 (483)
+.+|++.+.+.++++++++.++||++-.||..++.+.+.+ .|...... .+ ..++..+. .|..- ..| ..+
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~----~G~~~~~~--~~-~~~~~~~~--~~~~~-~~~h~~~ 71 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEE----HGAYPAPL--GY-YGFPKSIC--TSVNE-VVCHGIP 71 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHH----cCCCcccc--cC-CCCCccee--cCCCC-ceeCCCC
Confidence 4578999999999999999999999999999987776655 44422110 00 11121111 22111 011 123
Q ss_pred CCCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcC
Q 011536 399 YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 442 (483)
Q Consensus 399 ~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte 442 (483)
.+.+|++|+++.++.+....+ +...++.|+.|++
T Consensus 72 ~~~~l~~Gd~v~id~g~~~~G----------Y~ad~~RT~~~G~ 105 (238)
T cd01086 72 DDRVLKDGDIVNIDVGVELDG----------YHGDSARTFIVGE 105 (238)
T ss_pred CCcccCCCCEEEEEEEEEECC----------EEEEEEEEEECCC
Confidence 578999999999999986543 6779999999975
No 44
>PRK05716 methionine aminopeptidase; Validated
Probab=96.63 E-value=0.019 Score=55.60 Aligned_cols=103 Identities=15% Similarity=0.174 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccCCcccCC-CCC
Q 011536 320 SLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSS-VVT 398 (483)
Q Consensus 320 ~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p-~~~ 398 (483)
+.+|++.+.+.++++++++.++||++..||..++...+.+ .|...... ++..+ +..+ ..|.+- -.+ ..+
T Consensus 12 ~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~----~G~~~~~~--~~~~~-~~~~--~~g~~~-~~~h~~~ 81 (252)
T PRK05716 12 EKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRD----QGAIPAPL--GYHGF-PKSI--CTSVNE-VVCHGIP 81 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHH----CCCEeccc--CCCCC-CcCe--Eecccc-eeecCCC
Confidence 3456888889999999999999999999999987776655 44321110 01111 1111 112111 011 123
Q ss_pred CCCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcC
Q 011536 399 YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 442 (483)
Q Consensus 399 ~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte 442 (483)
++.+|++|++|.++.|..+. |+..-+.-|+.|.+
T Consensus 82 ~~~~l~~Gd~v~id~g~~~~----------gY~~d~~RT~~vG~ 115 (252)
T PRK05716 82 SDKVLKEGDIVNIDVTVIKD----------GYHGDTSRTFGVGE 115 (252)
T ss_pred CCcccCCCCEEEEEEEEEEC----------CEEEEeEEEEECCC
Confidence 57899999999999998764 36788889998854
No 45
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.58 E-value=0.027 Score=55.96 Aligned_cols=99 Identities=16% Similarity=0.097 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccCCcccCCCCCC
Q 011536 320 SLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTY 399 (483)
Q Consensus 320 ~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p~~~~ 399 (483)
+.+|++-+.+.++++++++.++||++..||...+.+.+.+.....+ ||..++-.- .-.|-.|..++
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~a-------------fp~~is~n~-~~~H~~p~~~d 67 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGPA-------------FPVNLSINE-CAAHYTPNAGD 67 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC-------------CCceeccCC-EeeCCCCCCCC
Confidence 3568888999999999999999999999999988877766321111 221111000 01233444445
Q ss_pred CCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcC
Q 011536 400 ERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 442 (483)
Q Consensus 400 ~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte 442 (483)
+.+|++|+++.|+.|..+.+ +-.-+.-|+.|++
T Consensus 68 ~~~l~~GDvV~iD~G~~~dG----------Y~sD~arT~~vg~ 100 (291)
T cd01088 68 DTVLKEGDVVKLDFGAHVDG----------YIADSAFTVDFDP 100 (291)
T ss_pred CcccCCCCEEEEEEEEEECC----------EEEEEEEEEecCh
Confidence 68999999999999997643 4455556666654
No 46
>PRK12896 methionine aminopeptidase; Reviewed
Probab=96.14 E-value=0.062 Score=52.11 Aligned_cols=111 Identities=15% Similarity=0.125 Sum_probs=71.1
Q ss_pred eEeeeCCCCCCH--HHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEe
Q 011536 309 TRTWPPCGSFSS--LEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHY 386 (483)
Q Consensus 309 tRT~~v~G~~t~--~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~ 386 (483)
.|++.| ..+.+ ..|++.+.+.++.+++.+.++||++-.||...+...+.+ .|...... .+ ..|+..+.
T Consensus 5 ~~~~~v-Ks~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~----~G~~~~~~--~~-~~~~~~~~-- 74 (255)
T PRK12896 5 GRGMEI-KSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEE----HGAIPSPE--GY-YGFPGSTC-- 74 (255)
T ss_pred CCceeE-CCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHH----CCCEeCcc--cC-CCCCcceE--
Confidence 577766 33333 456777788888888889999999999999987776654 44432110 00 11222211
Q ss_pred ccCC---cccCCCCCCCCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcC
Q 011536 387 LGMD---VHDSSVVTYERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 442 (483)
Q Consensus 387 iGl~---~he~p~~~~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte 442 (483)
.|.. .| ..+++.+|++|+++.++.|..+.+ +..-+.-|+++++
T Consensus 75 ~~~n~~~~h---~~p~~~~l~~Gd~v~iD~g~~~~g----------Y~aD~~RT~~vG~ 120 (255)
T PRK12896 75 ISVNEEVAH---GIPGPRVIKDGDLVNIDVSAYLDG----------YHGDTGITFAVGP 120 (255)
T ss_pred ecCCCeeEe---cCCCCccCCCCCEEEEEEeEEECc----------EEEeeEEEEECCC
Confidence 1211 12 123568999999999999987543 5677788888864
No 47
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=96.14 E-value=0.052 Score=52.43 Aligned_cols=88 Identities=19% Similarity=0.218 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccCCc-----ccC
Q 011536 320 SLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDV-----HDS 394 (483)
Q Consensus 320 ~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~-----he~ 394 (483)
+..|++=+.+.++.+.+.+.++||+|..||.+.+.+++.+ .|..+... +|.. || ..+.+.+ |-.
T Consensus 12 ek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~----~ga~pa~~--gy~g-~~----~~~ciSvNe~v~Hgi 80 (255)
T COG0024 12 EKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIRE----KGAYPAFL--GYKG-FP----FPTCISVNEVVAHGI 80 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH----cCceehhc--cCcC-CC----cceEeehhheeeecC
Confidence 3455666777888888889999999999999999998876 34332211 2222 22 2222222 334
Q ss_pred CCCCCCCCcCCCCEEEecceeeeCCC
Q 011536 395 SVVTYERPLEPGVVITIEPGIYIPLS 420 (483)
Q Consensus 395 p~~~~~~~L~~Gmv~tiEPgiy~p~~ 420 (483)
|. ++.+|++|.++.|.-|+.+.+.
T Consensus 81 P~--d~~vlk~GDiv~IDvg~~~dG~ 104 (255)
T COG0024 81 PG--DKKVLKEGDIVKIDVGAHIDGY 104 (255)
T ss_pred CC--CCcccCCCCEEEEEEEEEECCe
Confidence 55 7799999999999999998653
No 48
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=95.65 E-value=0.18 Score=50.26 Aligned_cols=98 Identities=14% Similarity=0.109 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccCCcccCCCCCCC
Q 011536 321 LEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTYE 400 (483)
Q Consensus 321 ~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p~~~~~ 400 (483)
..|++-+.+.++.+.+++.++||++..||.....+.+.+...+. .||..+.-+ ..-.|-.|..+++
T Consensus 7 ~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~-------------aFp~~vs~n-~~~~H~~p~~~d~ 72 (295)
T TIGR00501 7 KWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEP-------------AFPCNISIN-ECAAHFTPKAGDK 72 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC-------------CCCcceecC-CEeeCCCCCCCcC
Confidence 45677778888888999999999999999998877776632221 122222100 0112445544456
Q ss_pred CCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcC
Q 011536 401 RPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 442 (483)
Q Consensus 401 ~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte 442 (483)
.+|++|.++.|+.|..+.+ +-.-+.-|+.|++
T Consensus 73 ~~l~~GDvV~iD~G~~~dG----------Y~aD~arT~~vG~ 104 (295)
T TIGR00501 73 TVFKDGDVVKLDLGAHVDG----------YIADTAITVDLGD 104 (295)
T ss_pred ccCCCCCEEEEEEeEEECC----------EEEEEEEEEEeCc
Confidence 7899999999999987643 5677777888864
No 49
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=95.64 E-value=0.073 Score=51.59 Aligned_cols=102 Identities=17% Similarity=0.180 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccCCcccCC--CC
Q 011536 320 SLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSS--VV 397 (483)
Q Consensus 320 ~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p--~~ 397 (483)
+.+|++-+...++.+.+..++|||+|-.||++++++..-+ .|--++.- +|. .||..+--++ .|.- .+
T Consensus 123 e~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ie----rg~YPSPL--nYy-~FPKS~CTSV----NEviCHGI 191 (369)
T KOG2738|consen 123 EGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIE----RGAYPSPL--NYY-GFPKSVCTSV----NEVICHGI 191 (369)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHh----cCCcCCCc--ccC-CCchhhhcch----hheeecCC
Confidence 3456677777889999999999999999999999988765 44333221 221 2444333222 2221 34
Q ss_pred CCCCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcC
Q 011536 398 TYERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 442 (483)
Q Consensus 398 ~~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte 442 (483)
++.++||.|..+.|...+|..+. =--+.+|++|++
T Consensus 192 PD~RpLedGDIvNiDVtvY~~Gy----------HGDlneTffvG~ 226 (369)
T KOG2738|consen 192 PDSRPLEDGDIVNIDVTVYLNGY----------HGDLNETFFVGN 226 (369)
T ss_pred CCcCcCCCCCEEeEEEEEEeccc----------cCccccceEeec
Confidence 57899999999999999997653 122567888876
No 50
>PRK08671 methionine aminopeptidase; Provisional
Probab=95.41 E-value=0.28 Score=48.69 Aligned_cols=97 Identities=18% Similarity=0.171 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccCCcccCCCCCCC
Q 011536 321 LEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTYE 400 (483)
Q Consensus 321 ~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p~~~~~ 400 (483)
..|++-+.+.++.+.+.+.++||++..||.....+.+.+. |- ...||..++-+= ...|-.|..+++
T Consensus 4 ~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~----g~---------~~afp~~vs~n~-~~~H~~p~~~d~ 69 (291)
T PRK08671 4 KYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIREL----GA---------KPAFPCNISINE-VAAHYTPSPGDE 69 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHc----CC---------ccCCCCEEeeCC-CccCCCCCCCCC
Confidence 4677888888999999999999999999999888877663 31 112333222111 123545544456
Q ss_pred CCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEc
Q 011536 401 RPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLIT 441 (483)
Q Consensus 401 ~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVt 441 (483)
.+|++|.++.|+.|..+.+ +-.-+.-|+.++
T Consensus 70 ~~l~~GDvV~iD~G~~~dG----------Y~aD~arT~~vG 100 (291)
T PRK08671 70 RVFPEGDVVKLDLGAHVDG----------YIADTAVTVDLG 100 (291)
T ss_pred cccCCCCEEEEEEeEEECC----------EEEEEEEEEEeC
Confidence 7899999999999987643 566667788887
No 51
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=95.38 E-value=0.21 Score=51.64 Aligned_cols=108 Identities=17% Similarity=0.165 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCC-CCCCCcceeEecc-CCcccCCCCC
Q 011536 321 LEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPY-NELNPTSIGHYLG-MDVHDSSVVT 398 (483)
Q Consensus 321 ~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~-~~~~~h~~GH~iG-l~~he~p~~~ 398 (483)
..|++-+.+.++.+.+++.|+||++..||.+.+.+.+.+.+... +..... ++ .--||..+. ++ .-.|-.|..+
T Consensus 21 ~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~-~~~~~~--~~~g~afpt~vS--vN~~v~H~~P~~~ 95 (389)
T TIGR00495 21 KYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKI-FKKEKE--MEKGIAFPTCIS--VNNCVGHFSPLKS 95 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhh-hccccc--ccCCCCCCeEEe--cCCeeeCCCCCCC
Confidence 44566677778888889999999999999999988887754221 100000 00 011222221 11 1134455444
Q ss_pred C-CCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcCC
Q 011536 399 Y-ERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITET 443 (483)
Q Consensus 399 ~-~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte~ 443 (483)
. +.+|++|.++.|.-|..+.+ |..-+..||+|++.
T Consensus 96 d~~~~Lk~GDvVkIDlG~~idG----------Y~aD~arTv~vG~~ 131 (389)
T TIGR00495 96 DQDYILKEGDVVKIDLGCHIDG----------FIALVAHTFVVGVA 131 (389)
T ss_pred CCCcCcCCCCEEEEEEEEEECC----------EEEEEEEEEEECCc
Confidence 3 47899999999999998754 67888999999853
No 52
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=94.95 E-value=0.44 Score=50.16 Aligned_cols=105 Identities=16% Similarity=0.078 Sum_probs=68.2
Q ss_pred CCHHHH----HHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEecc-CCcc
Q 011536 318 FSSLEE----ALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLG-MDVH 392 (483)
Q Consensus 318 ~t~~q~----~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iG-l~~h 392 (483)
.++++. ++-+.+..+.+.+.+.++||++..||.......+.+.+.+.|... ..-||..++ +. ...|
T Consensus 153 ~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~-------g~aFPt~vS--~N~~aaH 223 (470)
T PTZ00053 153 LSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKC-------GWAFPTGCS--LNHCAAH 223 (470)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcc-------cCCCCceee--cCccccC
Confidence 355544 444555666777778899999999999988777766544444321 112333221 11 1135
Q ss_pred cCCCCCCCCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEc
Q 011536 393 DSSVVTYERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLIT 441 (483)
Q Consensus 393 e~p~~~~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVt 441 (483)
-.|..+.+.+|++|.++.|.-|..+.+ +-.=+.-||.|.
T Consensus 224 ~tP~~gd~~vLk~GDvVkID~G~~vdG----------YiaD~ArTv~vg 262 (470)
T PTZ00053 224 YTPNTGDKTVLTYDDVCKLDFGTHVNG----------RIIDCAFTVAFN 262 (470)
T ss_pred CCCCCCCCcEecCCCeEEEEEeEEECC----------EEEeEEEEEEeC
Confidence 566655578999999999999987754 455566777775
No 53
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=94.78 E-value=0.44 Score=45.43 Aligned_cols=107 Identities=16% Similarity=0.207 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCccc-CCCCCCC-CCCCCcceeEecc-CCcccCCCC
Q 011536 321 LEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVN-SDGTDPY-NELNPTSIGHYLG-MDVHDSSVV 397 (483)
Q Consensus 321 ~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~-~~~~~~~-~~~~~h~~GH~iG-l~~he~p~~ 397 (483)
..|++-+.+.++++++++.++||++-.||...+.+.+.+.+... +.. .. +. ..-|+..++ ++ ...|-.|..
T Consensus 3 ~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~-~~~~~~---g~~g~~~~~~v~--~n~~~~H~~p~~ 76 (228)
T cd01089 3 KYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKV-YKKEKK---LEKGIAFPTCIS--VNNCVCHFSPLK 76 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhccc-ccCccc---ccCCCCcCeEec--cCceeecCCCCC
Confidence 46788889999999999999999999999888777777644311 000 00 00 000111111 00 011223332
Q ss_pred -CCCCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcCC
Q 011536 398 -TYERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITET 443 (483)
Q Consensus 398 -~~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte~ 443 (483)
.++.+|++|.++.|+.|..+.+ +-.-+.-|+.|++-
T Consensus 77 ~~~~~~l~~Gd~v~iD~g~~~~G----------Y~sD~tRT~~vG~~ 113 (228)
T cd01089 77 SDATYTLKDGDVVKIDLGCHIDG----------YIAVVAHTIVVGAE 113 (228)
T ss_pred CCCCcccCCCCEEEEEEEEEECC----------EEEEEEEEEEeCCc
Confidence 3678899999999999987643 67778889998753
No 54
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=94.09 E-value=0.81 Score=42.54 Aligned_cols=97 Identities=22% Similarity=0.195 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEecc-CCcccCCCCCC
Q 011536 321 LEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLG-MDVHDSSVVTY 399 (483)
Q Consensus 321 ~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iG-l~~he~p~~~~ 399 (483)
..|++-+.+..+..++.+.++||++-.||.......+.+ .|.. ...|+..++-+.- ...| ..++
T Consensus 3 ~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~----~g~~--------~~~~~~~v~~g~~~~~~h---~~~~ 67 (208)
T cd01092 3 LLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRK----LGAE--------GPSFDTIVASGPNSALPH---GVPS 67 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHH----cCCC--------CCCCCcEEEECccccccC---CCCC
Confidence 457888888899999999999999999999987766654 3321 1122323222211 1122 2235
Q ss_pred CCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcC
Q 011536 400 ERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 442 (483)
Q Consensus 400 ~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte 442 (483)
+.+|++|.++.|+.|.... |+-.-+.-|++|++
T Consensus 68 ~~~l~~gd~v~id~g~~~~----------gy~~d~~RT~~~g~ 100 (208)
T cd01092 68 DRKIEEGDLVLIDFGAIYD----------GYCSDITRTVAVGE 100 (208)
T ss_pred CcCcCCCCEEEEEeeeeEC----------CEeccceeEEECCC
Confidence 6889999999999887543 36677788999885
No 55
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=93.80 E-value=0.79 Score=42.15 Aligned_cols=95 Identities=17% Similarity=0.079 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCccEEEeCCCCCccccc-----CCCcccCCCCe
Q 011536 218 KLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYS-----RNDQKIDDGDL 292 (483)
Q Consensus 218 ~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~iVasG~na~~~h~~-----~~~~~l~~Gd~ 292 (483)
..++++.+.+..++..+++.++||++-.||...+...+.+.|... .+...++-|- ....|-. .++.+|++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~-~~~~~~Gh~i-G~~~~e~~~~~~~~~~~l~~gmv 179 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGP-NFGHRTGHGI-GLEIHEPPVLKAGDDTVLEPGMV 179 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccc-cCCCCCcccc-CcccCCCCCcCCCCCCCcCCCCE
Confidence 467888888999999999999999999999999999999998741 1111111111 1112322 25679999999
Q ss_pred EEEeccceeC-CeEeeeeEeeeC
Q 011536 293 VLMDVGCELH-GYVSDMTRTWPP 314 (483)
Q Consensus 293 vlvD~g~~~~-GY~sDitRT~~v 314 (483)
+.++.+.... ++..-+.-|+.|
T Consensus 180 ~~iep~~~~~~~~g~~~ed~v~v 202 (207)
T cd01066 180 FAVEPGLYLPGGGGVRIEDTVLV 202 (207)
T ss_pred EEECCEEEECCCcEEEeeeEEEE
Confidence 9999998776 578888888876
No 56
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=93.65 E-value=0.9 Score=42.29 Aligned_cols=98 Identities=15% Similarity=0.121 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHH-HHHHHHhcCcccCCCCCCCCCCCCcceeEeccCCcccCCCCC
Q 011536 320 SLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGM-LRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVT 398 (483)
Q Consensus 320 ~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~-l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p~~~ 398 (483)
+..|++.+.+.++.+++++.++||+|-.||...+.+. +.+ .|... ..++..+ ..|-...-....+
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~----~g~~~--------~~~~~~~--~~g~~~~~~~~~~ 66 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRR----HGGEE--------PAFPPIV--GSGPNTDLPHYTP 66 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHH----TTTTE--------ESSESEE--EECCCCGETTTBC
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHH----cCCCc--------ccCCceE--ecCCcceecceec
Confidence 3568889999999999999999999999999988876 333 33110 0111111 1121111011122
Q ss_pred CCCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEc
Q 011536 399 YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLIT 441 (483)
Q Consensus 399 ~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVt 441 (483)
++.+|++|+++.|+-+..+.+ +-.-+.-|+++.
T Consensus 67 ~~~~l~~gd~v~id~~~~~~g----------y~~d~~Rt~~~G 99 (207)
T PF00557_consen 67 TDRRLQEGDIVIIDFGPRYDG----------YHADIARTFVVG 99 (207)
T ss_dssp CSSBESTTEEEEEEEEEEETT----------EEEEEEEEEESS
T ss_pred cceeeecCCcceeeccceeee----------eEeeeeeEEEEe
Confidence 578899999999998876543 678888888774
No 57
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=93.26 E-value=1.1 Score=43.09 Aligned_cols=101 Identities=16% Similarity=0.165 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccCCcccCC-CCCCC
Q 011536 322 EEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSS-VVTYE 400 (483)
Q Consensus 322 q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p-~~~~~ 400 (483)
.|++.+.+.++.+++++.++||++-.||...+...+.+ .|...... ++. .|+..+ ..|..- ..| ..+++
T Consensus 12 ~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~----~G~~~~~~--~~~-~~~~~~--~~~~n~-~~~H~~~~~ 81 (247)
T TIGR00500 12 IRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEK----HGAKPAFL--GYY-GFPGSV--CISVNE-VVIHGIPDK 81 (247)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH----CCCCcccc--CCC-CCCcee--Eecccc-EEEecCCCC
Confidence 45666667777777888899999999999877666654 44321100 111 122211 122211 111 12357
Q ss_pred CCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcC
Q 011536 401 RPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 442 (483)
Q Consensus 401 ~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte 442 (483)
.+|++|.++.++-|... +|+-.-+.-|+.|.+
T Consensus 82 ~~l~~Gd~v~iD~g~~~----------~gY~aD~~RT~~vG~ 113 (247)
T TIGR00500 82 KVLKDGDIVNIDVGVIY----------DGYHGDTAKTFLVGK 113 (247)
T ss_pred cccCCCCEEEEEEEEEE----------CCEEEEEEEEEEcCC
Confidence 89999999999988754 346777888888864
No 58
>PRK12897 methionine aminopeptidase; Reviewed
Probab=93.20 E-value=1.5 Score=42.29 Aligned_cols=102 Identities=18% Similarity=0.209 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccCCcccCCCCCCCC
Q 011536 322 EEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTYER 401 (483)
Q Consensus 322 q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p~~~~~~ 401 (483)
.|++-+....+.+++.+.++||++-.||.......+.+ .|...... ++. .|+..+. .|..---....+++.
T Consensus 13 ~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~----~G~~~~~~--~~~-~~~~~i~--~g~n~~~~H~~p~~~ 83 (248)
T PRK12897 13 MHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEK----HGATSEQK--GYN-GYPYAIC--ASVNDEMCHAFPADV 83 (248)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHH----cCCccccc--ccC-CCCcceE--eccCCEeecCCCCCc
Confidence 34566666777888888999999999999988777765 44321100 111 1222221 122211111223578
Q ss_pred CcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcC
Q 011536 402 PLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 442 (483)
Q Consensus 402 ~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte 442 (483)
+|++|.++.++-|.-+. |+..-+.-|+.|++
T Consensus 84 ~l~~Gd~V~iD~g~~~~----------GY~sD~tRT~~vG~ 114 (248)
T PRK12897 84 PLTEGDIVTIDMVVNLN----------GGLSDSAWTYRVGK 114 (248)
T ss_pred ccCCCCEEEEEeeEEEC----------CEEEEEEEEEEcCC
Confidence 99999999999887543 35677788888853
No 59
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=92.10 E-value=2.4 Score=40.60 Aligned_cols=96 Identities=17% Similarity=0.212 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccCCcccCCCCCCC
Q 011536 321 LEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTYE 400 (483)
Q Consensus 321 ~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p~~~~~ 400 (483)
..|++-+.+..+.+++++.++||++-.||...+...+.+ .|.. ..|+..++- |-.-......+.+
T Consensus 3 ~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~----~G~~---------~~~~~~v~~--g~~~~~~H~~~~~ 67 (243)
T cd01087 3 LMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRS----RGAR---------LAYSYIVAA--GSNAAILHYVHND 67 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHH----cCCC---------cCCCCeEEE--CCCccccCCCcCC
Confidence 467888899999999999999999999999987776655 3422 011222221 2111111122357
Q ss_pred CCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEc
Q 011536 401 RPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLIT 441 (483)
Q Consensus 401 ~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVt 441 (483)
.+|++|.++.++.|.... |+-.-+.-|+.|.
T Consensus 68 ~~l~~Gd~v~vD~g~~~~----------GY~ad~~Rt~~vg 98 (243)
T cd01087 68 QPLKDGDLVLIDAGAEYG----------GYASDITRTFPVN 98 (243)
T ss_pred CcCCCCCEEEEEeCceEC----------CEeeeeeEEEEeC
Confidence 899999999999887543 3566677788773
No 60
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=91.72 E-value=1 Score=43.95 Aligned_cols=86 Identities=21% Similarity=0.162 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccCC-----cccCC
Q 011536 321 LEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMD-----VHDSS 395 (483)
Q Consensus 321 ~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~-----~he~p 395 (483)
..|+..++=+++.+.+-+.+|||+++-||-+...+..++.+.+.|+.. ++|...|+. -|-.|
T Consensus 87 d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~a-------------Gi~FPtG~SlN~cAAHyTp 153 (397)
T KOG2775|consen 87 DLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNA-------------GIGFPTGCSLNHCAAHYTP 153 (397)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccccc-------------cccCCCcccccchhhhcCC
Confidence 344555566667777788999999999998888777766555555432 223334433 36678
Q ss_pred CCCCCCCcCCCCEEEecceeeeCC
Q 011536 396 VVTYERPLEPGVVITIEPGIYIPL 419 (483)
Q Consensus 396 ~~~~~~~L~~Gmv~tiEPgiy~p~ 419 (483)
..+..++|+...|.-|.-|..+.+
T Consensus 154 NaGd~tVLqydDV~KiDfGthi~G 177 (397)
T KOG2775|consen 154 NAGDKTVLKYDDVMKIDFGTHIDG 177 (397)
T ss_pred CCCCceeeeecceEEEeccccccC
Confidence 888889999999999998887765
No 61
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=91.61 E-value=1.9 Score=41.06 Aligned_cols=92 Identities=15% Similarity=0.017 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCccEEEeCCCC-Cccccc----------CCCcccC
Q 011536 220 MRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNA-AVIHYS----------RNDQKID 288 (483)
Q Consensus 220 mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~iVasG~na-~~~h~~----------~~~~~l~ 288 (483)
.|++.+++.++++++++.++||++=.||.+.++..+.+.|...... ...|-.- ...|.. .++.+|+
T Consensus 111 ~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~---~~~GHgiGl~~he~~~~~g~~~~~~~~~~Le 187 (228)
T cd01090 111 HLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRT---FGYGHSFGVLSHYYGREAGLELREDIDTVLE 187 (228)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccc---cccCcccccccccCCCccccccCCCCCCccC
Confidence 5677788889999999999999999999999999999998653210 0111110 012221 2457899
Q ss_pred CCCeEEEeccceeC----C-eEeeeeEeeeC
Q 011536 289 DGDLVLMDVGCELH----G-YVSDMTRTWPP 314 (483)
Q Consensus 289 ~Gd~vlvD~g~~~~----G-Y~sDitRT~~v 314 (483)
+|.++.++.+..+. | .---+..|+.|
T Consensus 188 ~GMV~~iEP~i~~~~~~~g~gG~ried~v~V 218 (228)
T cd01090 188 PGMVVSMEPMIMLPEGQPGAGGYREHDILVI 218 (228)
T ss_pred CCCEEEECCEEeecccCCCCcEEEeeeEEEE
Confidence 99999999887542 1 22337777766
No 62
>PRK12318 methionine aminopeptidase; Provisional
Probab=90.59 E-value=4.9 Score=39.88 Aligned_cols=102 Identities=16% Similarity=0.181 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCC-CCCCcceeEecc-CCcccCCCCCC
Q 011536 322 EEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYN-ELNPTSIGHYLG-MDVHDSSVVTY 399 (483)
Q Consensus 322 q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~-~~~~h~~GH~iG-l~~he~p~~~~ 399 (483)
.|++-+.+.++.+++++.++||++-.||...++..+.+ .|..+... .+. .-|+..+.-+.- .-.| ..++
T Consensus 52 ~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~----~G~~~~~~--~~~~~~f~~~v~~g~n~~~~H---~~p~ 122 (291)
T PRK12318 52 IRKACQVTARILDALCEAAKEGVTTNELDELSRELHKE----YNAIPAPL--NYGSPPFPKTICTSLNEVICH---GIPN 122 (291)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH----cCCCcccc--ccCCCCCCcceEeeccceeec---CCCC
Confidence 34566666777888889999999999998866655543 44321110 111 112222211110 0112 2235
Q ss_pred CCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcC
Q 011536 400 ERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 442 (483)
Q Consensus 400 ~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte 442 (483)
+.+|++|.++.++.|..+. |+..-+.-|++|++
T Consensus 123 ~~~l~~GD~V~vD~g~~~~----------GY~aDitRT~~vG~ 155 (291)
T PRK12318 123 DIPLKNGDIMNIDVSCIVD----------GYYGDCSRMVMIGE 155 (291)
T ss_pred CCccCCCCEEEEEEeEEEC----------cEEEEEEEEEECCC
Confidence 7899999999999887653 36778888988854
No 63
>PRK07281 methionine aminopeptidase; Reviewed
Probab=90.37 E-value=5 Score=39.74 Aligned_cols=111 Identities=12% Similarity=0.062 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCC---CCCCcceeEeccCCcccCC-CC
Q 011536 322 EEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYN---ELNPTSIGHYLGMDVHDSS-VV 397 (483)
Q Consensus 322 q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~---~~~~h~~GH~iGl~~he~p-~~ 397 (483)
.|++-+.+.++.+++.+.+|||++-.||...+...+.+ .|..+... |+. .-||+.++=+. .- ..| ..
T Consensus 13 mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~----~g~~~~~~--G~~~~~~~f~~~v~~G~--n~-~~~H~~ 83 (286)
T PRK07281 13 MDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKE----ENVLPLQI--GVDGAMMDYPYATCCGL--ND-EVAHAF 83 (286)
T ss_pred HHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHH----cCCccccc--CCCCcccCCCcceEEec--cc-cccCCC
Confidence 34556666777888888999999999999877766654 44322110 111 12344333322 21 122 23
Q ss_pred CCCCCcCCCCEEEecceee------eCCC-----------CCCCCccceeeEEEeEEEEEc
Q 011536 398 TYERPLEPGVVITIEPGIY------IPLS-----------FSGPERFRGIGIRIEDEVLIT 441 (483)
Q Consensus 398 ~~~~~L~~Gmv~tiEPgiy------~p~~-----------~~~~~~~~g~GvriED~vlVt 441 (483)
+++.+|++|.++.|+-|+- ..+. ..+...++|+..-+.-|+.++
T Consensus 84 p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG 144 (286)
T PRK07281 84 PRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVG 144 (286)
T ss_pred CCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECC
Confidence 4678999999999998761 1110 011224566777777777665
No 64
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=88.28 E-value=3.6 Score=39.71 Aligned_cols=96 Identities=15% Similarity=0.068 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCC-CCccEEE--eCCCCCc-c--cccCCCcccCCCCe
Q 011536 219 LMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRM-AFNPVVG--GGPNAAV-I--HYSRNDQKIDDGDL 292 (483)
Q Consensus 219 ~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~-~~~~iVa--sG~na~~-~--h~~~~~~~l~~Gd~ 292 (483)
.+|++.+++.++.+++++.++||++=.++.......+.+.|.+.. .|..-++ .|-...- + -...++.+|++|.+
T Consensus 120 ~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~~~~~~~~~~GHgiGle~hE~~~~l~~~~~~~L~~GMv 199 (243)
T cd01091 120 EQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPELEPNFTKNLGFGIGLEFRESSLIINAKNDRKLKKGMV 199 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChhHHHhCcCCcccccCcccccCccccCCCCCCCcCCCCE
Confidence 455677778888888888999999999999998888877753321 1211111 1111100 0 01124678999999
Q ss_pred EEEeccce-e----------CCeEeeeeEeeeC
Q 011536 293 VLMDVGCE-L----------HGYVSDMTRTWPP 314 (483)
Q Consensus 293 vlvD~g~~-~----------~GY~sDitRT~~v 314 (483)
+.+..|.. . +.|.--++-|+.|
T Consensus 200 f~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~V 232 (243)
T cd01091 200 FNLSIGFSNLQNPEPKDKESKTYALLLSDTILV 232 (243)
T ss_pred EEEeCCcccccCccccCccCCeeEEEEEEEEEE
Confidence 99999875 2 3688889999988
No 65
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=88.08 E-value=3.6 Score=41.25 Aligned_cols=104 Identities=17% Similarity=0.240 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccCC-----cccCCC
Q 011536 322 EEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMD-----VHDSSV 396 (483)
Q Consensus 322 q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~-----~he~p~ 396 (483)
.|..=+.+..+.+..+++|+||++..||-...-..|.++..+. |.. .+-+-.++....-+. .|-.|.
T Consensus 24 Yk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~ki-YK~-------eK~~~KGIAfPT~Isvnncv~h~sPl 95 (398)
T KOG2776|consen 24 YKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKI-YKK-------EKDFEKGIAFPTSISVNNCVCHFSPL 95 (398)
T ss_pred hhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHH-Hhh-------hhhhhccccccceecccceeeccCcC
Confidence 3455667888889999999999999999877776666543221 000 001111111111112 133555
Q ss_pred CCC-CCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcCC
Q 011536 397 VTY-ERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITET 443 (483)
Q Consensus 397 ~~~-~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte~ 443 (483)
.++ +..|++|.|+-|.-|+.+.+ |-.-+..|++|++.
T Consensus 96 ksd~~~~Lk~GDvVKIdLG~HiDG----------fiA~vaHT~VV~~~ 133 (398)
T KOG2776|consen 96 KSDADYTLKEGDVVKIDLGVHIDG----------FIALVAHTIVVGPA 133 (398)
T ss_pred CCCCcccccCCCEEEEEeeeeecc----------ceeeeeeeEEeccC
Confidence 554 78999999999999998865 56778999999864
No 66
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=86.36 E-value=5.8 Score=37.69 Aligned_cols=102 Identities=18% Similarity=0.003 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCC--CChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEec-cCCcccCCC
Q 011536 320 SLEEALYDLILQTNKECLELCMPG--TSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYL-GMDVHDSSV 396 (483)
Q Consensus 320 ~~q~~~y~~v~~~~~~~i~~~rpG--~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~i-Gl~~he~p~ 396 (483)
..+.+.-..+.++.+.+.+.++|| ++-.||...+.+.+... .|+. ..-|+..+.=+. ....|-.|.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~---g~~~--------~~~f~~~v~~g~n~~~~H~~p~ 72 (224)
T cd01085 4 AAHIRDGVALVEFLAWLEQEVPKGETITELSAADKLEEFRRQQ---KGYV--------GLSFDTISGFGPNGAIVHYSPT 72 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHc---CCCc--------CCCcceEEEecCccCcCCCCcC
Confidence 344455566678888889999999 99999999887665432 1110 112333333222 112343343
Q ss_pred CCCCCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcC
Q 011536 397 VTYERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 442 (483)
Q Consensus 397 ~~~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte 442 (483)
...+.+|++|.++.|+.|..+.+ +-.-+.-|++|.+
T Consensus 73 ~~~~r~l~~GD~V~iD~g~~~~g----------Y~aD~~RT~~vG~ 108 (224)
T cd01085 73 EESNRKISPDGLYLIDSGGQYLD----------GTTDITRTVHLGE 108 (224)
T ss_pred cccCcccCCCCEEEEEeCccCCC----------cccccEEeecCCC
Confidence 22378999999999998876533 4455667777753
No 67
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=82.85 E-value=12 Score=38.75 Aligned_cols=95 Identities=9% Similarity=0.002 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCccEEEeCCCCC------cccccC-CCcccCCCC
Q 011536 219 LMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAA------VIHYSR-NDQKIDDGD 291 (483)
Q Consensus 219 ~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~iVasG~na~------~~h~~~-~~~~l~~Gd 291 (483)
.++++.+++.++..++++.++||++=.+|.......+.+.|.... ...--.-|-... .+.-.+ ++.+|++|-
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~~-h~~GhgiGl~~~~~~~e~~~~l~~~~~~~L~~GM 349 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHKD-SRTGYPIGLSYPPDWGERTMSLRPGDNTVLKPGM 349 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccC-CCceeeeccCcCCCCCCccccccCCCCceecCCC
Confidence 356778888889999999999999999999999999999887531 111111222110 001112 467899999
Q ss_pred eEEEeccceeCCeEeeeeEeeeC
Q 011536 292 LVLMDVGCELHGYVSDMTRTWPP 314 (483)
Q Consensus 292 ~vlvD~g~~~~GY~sDitRT~~v 314 (483)
++.++.|....|+..-+.-|+.|
T Consensus 350 v~tvEpgiy~~~~Gvried~v~V 372 (391)
T TIGR02993 350 TFHFMTGLWMEDWGLEITESILI 372 (391)
T ss_pred EEEEcceeEeCCCCeEEeeEEEE
Confidence 99999988666655677778877
No 68
>PRK09795 aminopeptidase; Provisional
Probab=82.79 E-value=8.2 Score=39.48 Aligned_cols=99 Identities=16% Similarity=0.075 Sum_probs=69.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCccEEEeCCC-CCccccc-----CCCcc
Q 011536 213 SPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPN-AAVIHYS-----RNDQK 286 (483)
Q Consensus 213 s~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~iVasG~n-a~~~h~~-----~~~~~ 286 (483)
.+++.+.++++-++..++..++++.++||++=.||.+.....+.+.|... .|..- .|-. +.-.|-. .++.+
T Consensus 235 ~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~-~~~h~--~GHgiGl~~he~p~i~~~~~~~ 311 (361)
T PRK09795 235 VSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGD-YFGHN--TGHAIGIEVHEDPRFSPRDTTT 311 (361)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCc-cCCCC--CCccCCccccCCCCcCCCCCCC
Confidence 35555568889999999999999999999999999999999999988653 12111 1111 1112322 24678
Q ss_pred cCCCCeEEEeccceeCC-eEeeeeEeeeC
Q 011536 287 IDDGDLVLMDVGCELHG-YVSDMTRTWPP 314 (483)
Q Consensus 287 l~~Gd~vlvD~g~~~~G-Y~sDitRT~~v 314 (483)
|++|.++.|+.|....| .-.-+.-|+.|
T Consensus 312 l~~gmv~~iEpgiy~~~~~gvriEd~v~v 340 (361)
T PRK09795 312 LQPGMLLTVEPGIYLPGQGGVRIEDVVLV 340 (361)
T ss_pred cCCCCEEEECCEEEeCCCCEEEEeeEEEE
Confidence 99999999998875433 23456667766
No 69
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=80.54 E-value=3 Score=44.65 Aligned_cols=115 Identities=15% Similarity=0.288 Sum_probs=66.4
Q ss_pred HHHHHHHhCCCCcEE--EEecCCc---ccccCCCCCCCCCCCceEEEeCCCCCCeEEEEEcCCcEEEEecCCCccccccc
Q 011536 60 RRKRLLEILPENSVA--ILAAAPE---KMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHECGLCMFMPETSAHDVIWK 134 (483)
Q Consensus 60 R~~rL~~~m~~~~l~--il~~~~~---~~~~~d~~y~f~q~~n~~YLtG~~~p~~~lvi~~~~~~~l~v~~~~~~~~~w~ 134 (483)
++.|+++.|...+++ |+.+.+. .|.+. -+.-..||+||..+.+++||+.+ +..|+++.+ .|.
T Consensus 11 ~~~~~~~~~~~~~i~aYi~Ps~DaH~sEy~~~-------~D~R~~flsGFsGsag~Avit~~-~a~lwtD~R-----Y~~ 77 (606)
T KOG2413|consen 11 ELMRLRELMKSPPIDAYILPSTDAHQSEYIAD-------RDERRAFLSGFSGSAGTAVITEE-EAALWTDGR-----YFQ 77 (606)
T ss_pred HHHHHHHHhcCCCceEEEccCCchhhhhhhcc-------hhhhhhhhcccCCCcceEEEecC-cceEEEccH-----HHH
Confidence 678899999999983 5555432 22221 23445799999999999999865 556777543 111
Q ss_pred CcccccccccccccCccccchhhHHhHHHHhhccCCceEecCccchhhhhhHHHHHH
Q 011536 135 GQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQK 191 (483)
Q Consensus 135 g~~~~~~~~~~~~~~d~~~~~~~~~~~L~~~~~~~~~I~~d~~~~~~~~~~~~~l~~ 191 (483)
.....++.--.+ .....+...+.+.|.+.+..+++||+|+.. .++..+..+.+
T Consensus 78 QA~~qld~~W~l--~k~~~~~~~v~~wl~~~l~~~~~vG~Dp~L--is~~~~~~~~~ 130 (606)
T KOG2413|consen 78 QAEQQLDSNWTL--MKMGEDVPTVEEWLAKVLPEGSRVGIDPTL--ISFDAWKQLEK 130 (606)
T ss_pred HHHhhhccccee--eeccCCCccHHHHHHHhCCCccccccCcce--echhHHHhHHH
Confidence 111111110000 111122345667788877788899998753 34444444443
No 70
>PRK15173 peptidase; Provisional
Probab=79.82 E-value=18 Score=36.48 Aligned_cols=94 Identities=6% Similarity=-0.115 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCccEEE--eC----CCCCcccc-cCCCcccCCCC
Q 011536 219 LMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVG--GG----PNAAVIHY-SRNDQKIDDGD 291 (483)
Q Consensus 219 ~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~iVa--sG----~na~~~h~-~~~~~~l~~Gd 291 (483)
..|++.+++.++...+++.++||++=.+|.......+.+.|.... +...+. .| -+- .+.. ..++.+|++|.
T Consensus 203 ~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~-~~~~~GHGiG~~lg~~E-~P~i~~~~~~~Le~GM 280 (323)
T PRK15173 203 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNY-NRGHLGHGNGVFLGLEE-SPFVSTHATESFTSGM 280 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccc-cCCCCCCcCCCCCCcCC-CCCCCCCCCCccCCCC
Confidence 456777888899999999999999999999999999999886421 111111 11 111 0111 12467899999
Q ss_pred eEEEecccee-CCeEeeeeEeeeC
Q 011536 292 LVLMDVGCEL-HGYVSDMTRTWPP 314 (483)
Q Consensus 292 ~vlvD~g~~~-~GY~sDitRT~~v 314 (483)
++.|+.|... +.+..-+.-|+.|
T Consensus 281 V~tiEPgiy~~g~ggvriEDtvlV 304 (323)
T PRK15173 281 VLSLETPYYGYNLGSIMIEDMILI 304 (323)
T ss_pred EEEECCEEEcCCCcEEEEeeEEEE
Confidence 9999987642 3334567888877
No 71
>PRK14575 putative peptidase; Provisional
Probab=77.30 E-value=37 Score=35.40 Aligned_cols=94 Identities=15% Similarity=0.165 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccCCcccCC-CCCCCC
Q 011536 323 EALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSS-VVTYER 401 (483)
Q Consensus 323 ~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p-~~~~~~ 401 (483)
|++-+.+.++.+++++.++||++=.||.......+.+ .|.. .+. .+ +.+. .|-+ ..| ..+.+.
T Consensus 188 r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~----~g~~------~~~-~~-~~v~--~G~~--~~~h~~~~~~ 251 (406)
T PRK14575 188 RKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMS----KSET------HFS-RF-HLIS--VGAD--FSPKLIPSNT 251 (406)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH----cCCC------cCC-cC-ceEE--ECCC--cccCCCCCCC
Confidence 3555566677777888999999999999877665543 2211 000 11 1121 1212 112 234678
Q ss_pred CcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEEcC
Q 011536 402 PLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 442 (483)
Q Consensus 402 ~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlVte 442 (483)
+|++|.++.++.|.... |+-.-+.-|+.|++
T Consensus 252 ~l~~Gd~v~iD~g~~~~----------GY~sditRT~~vG~ 282 (406)
T PRK14575 252 KACSGDLIKFDCGVDVD----------GYGADIARTFVVGE 282 (406)
T ss_pred cCCCCCEEEEEeceEEC----------CEeeeeEEEEECCC
Confidence 99999999999887432 36677888988853
No 72
>PRK14576 putative endopeptidase; Provisional
Probab=77.15 E-value=23 Score=36.89 Aligned_cols=95 Identities=9% Similarity=-0.077 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCccEEE--eCC--CC-Cccccc-CCCcccCCCCe
Q 011536 219 LMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVG--GGP--NA-AVIHYS-RNDQKIDDGDL 292 (483)
Q Consensus 219 ~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~iVa--sG~--na-~~~h~~-~~~~~l~~Gd~ 292 (483)
..+++.+++.++..++++.+|||++=.+|...+...+.+.|.... +..-+. .|- .. ..+... .++.+|++|..
T Consensus 285 ~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~-~~~~~GHgiG~~l~~~e~P~i~~~~~~~Le~GMv 363 (405)
T PRK14576 285 LTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHY-NRGHLGHGDGVFLGLEEVPFVSTQATETFCPGMV 363 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccc-cCCCCCCCCCCCCCcCcCCCcCCCCCCccCCCCE
Confidence 456777888899999999999999999999999999999987531 111011 110 00 112222 24678999999
Q ss_pred EEEeccceeCC-eEeeeeEeeeC
Q 011536 293 VLMDVGCELHG-YVSDMTRTWPP 314 (483)
Q Consensus 293 vlvD~g~~~~G-Y~sDitRT~~v 314 (483)
+.++.+....| .-.-+.-|+.|
T Consensus 364 ~~vEp~~y~~g~ggvriEDtvlV 386 (405)
T PRK14576 364 LSLETPYYGIGVGSIMLEDMILI 386 (405)
T ss_pred EEECCceeecCCCEEEEeeEEEE
Confidence 99987543322 23346777766
No 73
>PRK10879 proline aminopeptidase P II; Provisional
Probab=77.00 E-value=44 Score=35.21 Aligned_cols=93 Identities=17% Similarity=0.186 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEec-cCCcccCCCCCCCC
Q 011536 323 EALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYL-GMDVHDSSVVTYER 401 (483)
Q Consensus 323 ~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~i-Gl~~he~p~~~~~~ 401 (483)
|++-+.+..+..++++.++||++=.+|...+...+.+ .|... ..|+..++-|. ....|- .+++.
T Consensus 183 r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~----~G~~~--------~~~~~iv~~G~na~~~H~---~~~~~ 247 (438)
T PRK10879 183 RRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNR----HGARY--------PSYNTIVGSGENGCILHY---TENES 247 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHH----CCCCC--------CCCCcEEEEcCccccccC---CCCcc
Confidence 3555566777788889999999999998876665544 44321 11222222221 011232 23568
Q ss_pred CcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEE
Q 011536 402 PLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLI 440 (483)
Q Consensus 402 ~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlV 440 (483)
+|++|.++.+..|.... |+..-+.-|+.|
T Consensus 248 ~l~~GDlVliD~G~~~~----------GY~sDitRT~~v 276 (438)
T PRK10879 248 EMRDGDLVLIDAGCEYK----------GYAGDITRTFPV 276 (438)
T ss_pred ccCCCCEEEEEeCeEEC----------CEEEEeEEEEEE
Confidence 89999999999887543 467778888887
No 74
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=75.37 E-value=27 Score=35.93 Aligned_cols=93 Identities=16% Similarity=0.058 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCccE--EEeCCCCCcccccC------CCcccCCCC
Q 011536 220 MRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPV--VGGGPNAAVIHYSR------NDQKIDDGD 291 (483)
Q Consensus 220 mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~~~~~~i--VasG~na~~~h~~~------~~~~l~~Gd 291 (483)
+|+.-.+..+|..++++.++||++=.++.+.....+.+.|... .|..- -..| ...-.|-.| ++..|++|-
T Consensus 264 ~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~-~~~h~~GHgvG-~~l~vhE~p~~~~~~~~~~L~~GM 341 (384)
T COG0006 264 QREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGL-YFLHGTGHGVG-FVLDVHEHPQYLSPGSDTTLEPGM 341 (384)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCcc-cccCCccccCC-CCcccCcCccccCCCCCccccCCc
Confidence 3477778889999999999999999999999999999966542 12111 1122 112234333 577899999
Q ss_pred eEEEecccee-CCeEeeeeEeeeC
Q 011536 292 LVLMDVGCEL-HGYVSDMTRTWPP 314 (483)
Q Consensus 292 ~vlvD~g~~~-~GY~sDitRT~~v 314 (483)
++.++.|..+ +.+-.-|.-++.|
T Consensus 342 v~t~Epg~y~~g~~GirIEd~vlV 365 (384)
T COG0006 342 VFSIEPGIYIPGGGGVRIEDTVLV 365 (384)
T ss_pred EEEeccccccCCCceEEEEEEEEE
Confidence 9999999544 6788899999988
No 75
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=34.90 E-value=34 Score=21.56 Aligned_cols=18 Identities=56% Similarity=0.894 Sum_probs=13.8
Q ss_pred cCCCCCCCCCHHHHHHHHHHHH
Q 011536 44 KEGEITPGISAEEYISRRKRLL 65 (483)
Q Consensus 44 ~~~~~tpgis~~ey~~R~~rL~ 65 (483)
..|.+ |.+||.++.++|.
T Consensus 13 ~~G~I----seeEy~~~k~~ll 30 (31)
T PF09851_consen 13 DKGEI----SEEEYEQKKARLL 30 (31)
T ss_pred HcCCC----CHHHHHHHHHHHh
Confidence 45654 4899999998875
No 76
>PF07305 DUF1454: Protein of unknown function (DUF1454); InterPro: IPR009918 This family consists of several Enterobacterial sequences of around 200 residues in length, which are often known as YiiQ proteins. The function of this family is unknown.
Probab=32.45 E-value=2.6e+02 Score=25.80 Aligned_cols=40 Identities=18% Similarity=0.068 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHH
Q 011536 320 SLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRK 359 (483)
Q Consensus 320 ~~q~~~y~~v~~~~~~~i~~~rpG~~~~~i~~~~~~~l~~ 359 (483)
++|+..-+...+-..+.+...-|..+..+-.+...+.+.+
T Consensus 115 ~e~kaar~~a~~YmaAl~r~F~Ptls~eQs~~kl~~lL~~ 154 (200)
T PF07305_consen 115 PEQKAARALAIEYMAALMRQFEPTLSPEQSQEKLQKLLTK 154 (200)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHc
Confidence 7788888888888888888888999999888877776654
No 77
>PRK13607 proline dipeptidase; Provisional
Probab=28.89 E-value=2.9e+02 Score=29.13 Aligned_cols=40 Identities=8% Similarity=-0.191 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHH----HHHcCCC
Q 011536 222 ESASIGCQALLQTMLHSKSHPYEGLLAAKFEYE----CKMRGAQ 261 (483)
Q Consensus 222 ~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~----~~~~G~~ 261 (483)
+.-+++.++..++++.++||++=.||....... +.+.|..
T Consensus 272 ~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~ 315 (443)
T PRK13607 272 ALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIV 315 (443)
T ss_pred HHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 567778888899999999999999998766543 3444444
No 78
>PF02569 Pantoate_ligase: Pantoate-beta-alanine ligase; InterPro: IPR003721 D-Pantothenate is synthesized via four enzymes from ketoisovalerate, which is an intermediate of branched-chain amino acid synthesis []. Pantoate-beta-alanine ligase, also know as pantothenate synthase, (6.3.2.1 from EC) catalyzes the formation of pantothenate from pantoate and alanine in the pantothenate biosynthesis pathway [].; GO: 0004592 pantoate-beta-alanine ligase activity, 0015940 pantothenate biosynthetic process; PDB: 3MUE_C 1V8F_B 1UFV_A 2X3F_B 1MOP_A 3COY_B 3IOC_A 1N2E_A 3IVX_A 1N2H_A ....
Probab=25.18 E-value=1.7e+02 Score=28.93 Aligned_cols=89 Identities=19% Similarity=0.316 Sum_probs=56.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCC-CChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCcceeEeccCCcccCC
Q 011536 317 SFSSLEEALYDLILQTNKECLELCMPG-TSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSS 395 (483)
Q Consensus 317 ~~t~~q~~~y~~v~~~~~~~i~~~rpG-~~~~~i~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~h~~GH~iGl~~he~p 395 (483)
..|+++|+....+.++...+-+.++.| .+..++-+.+++.+... .++... ++ ++-|..
T Consensus 191 ~Ls~~eR~~A~~l~~~L~~a~~~~~~G~~~~~~l~~~~~~~l~~~---~~~~~d----------------Y~--ei~d~~ 249 (280)
T PF02569_consen 191 YLSPEEREAAPVLYRALKAAKEAIRAGERDASELIQAARKILESE---PGIEVD----------------YV--EIVDPD 249 (280)
T ss_dssp GS-HHHHHHTTHHHHHHHHHHHHHHTT--BHHHHHHHHHHHHHTT---TTEEEE----------------EE--EEEETT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHhhC---CCCCcc----------------EE--EEeCHH
Confidence 358999999999999999999999988 46888888777666531 121111 11 344444
Q ss_pred CCCCCCCcCCCCEEEecceeeeCCCCCCCCccceeeEEEeEEEEE
Q 011536 396 VVTYERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLI 440 (483)
Q Consensus 396 ~~~~~~~L~~Gmv~tiEPgiy~p~~~~~~~~~~g~GvriED~vlV 440 (483)
.+..-..+.++.++.+- .|+ +++|+-|+++|
T Consensus 250 tL~~~~~~~~~~~l~~A--a~~------------G~vRLIDNi~i 280 (280)
T PF02569_consen 250 TLEPIETVEPGARLLVA--AYV------------GKVRLIDNIII 280 (280)
T ss_dssp TSSBCSBCSSEEEEEEE--EEE------------TTEEEEEEEEE
T ss_pred HCCCCccCCCCEEEEEE--EEE------------CCcccccceEC
Confidence 44444455556444443 444 47999999886
No 79
>PF09818 ABC_ATPase: Predicted ATPase of the ABC class; InterPro: IPR019195 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This entry consists of various predicted ABC transporter class ATPases.
Probab=24.24 E-value=8.7e+02 Score=25.69 Aligned_cols=20 Identities=20% Similarity=0.228 Sum_probs=15.5
Q ss_pred HHHHHHhCCCCcEEEEecCC
Q 011536 61 RKRLLEILPENSVAILAAAP 80 (483)
Q Consensus 61 ~~rL~~~m~~~~l~il~~~~ 80 (483)
.+.||+.|+++|++..+++.
T Consensus 180 Q~~lR~~L~~~gLVAFVadG 199 (448)
T PF09818_consen 180 QEALRSQLKERGLVAFVADG 199 (448)
T ss_pred HHHHHHHHHHCCcEEEECCC
Confidence 35689999999997777654
No 80
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=22.21 E-value=2.5e+02 Score=30.80 Aligned_cols=81 Identities=12% Similarity=0.051 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCC-CCCccEEEeCC-----CCCcccccCCCccc
Q 011536 214 PAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQR-MAFNPVVGGGP-----NAAVIHYSRNDQKI 287 (483)
Q Consensus 214 ~~EI~~mR~A~~i~~~a~~~~~~~~~~G~tE~el~a~~~~~~~~~G~~~-~~~~~iVasG~-----na~~~h~~~~~~~l 287 (483)
.+...+|..+..+- +..+..++||.+-.+|...+...+.+.|-+- +.|.-.|+++. .+..+....++++|
T Consensus 298 ~e~~~Ny~fl~~lQ----k~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~igiefR~s~~~~nvkn~r~l 373 (1001)
T COG5406 298 SEQQKNYEFLYMLQ----KYILGLVRPGTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIGIEFRSSQKPFNVKNGRVL 373 (1001)
T ss_pred hHhhhhHHHHHHHH----HHHHhhcCCCCCchhHHHHHHHHHHhcCCccCchHhhhhhhhccccccccccceeccCCcee
Confidence 34444555544333 3344568999999999999999898888662 33433344332 22335556688999
Q ss_pred CCCCeEEEecc
Q 011536 288 DDGDLVLMDVG 298 (483)
Q Consensus 288 ~~Gd~vlvD~g 298 (483)
|.|+.+.+.+|
T Consensus 374 q~g~~fnis~g 384 (1001)
T COG5406 374 QAGCIFNISLG 384 (1001)
T ss_pred ccccEEEEeec
Confidence 99999988886
No 81
>PF08774 VRR_NUC: VRR-NUC domain; InterPro: IPR014883 This entry contains proteins with the VRR-NUC domain. It is associated with members of the PD-(D/E)XK nuclease superfamily, which include the type III restriction modification enzymes, for example StyLTI: (P40815 from SWISSPROT).; GO: 0016788 hydrolase activity, acting on ester bonds
Probab=21.16 E-value=4.3e+02 Score=21.06 Aligned_cols=18 Identities=11% Similarity=-0.033 Sum_probs=15.9
Q ss_pred CcHHHHHHHHHHHHHHcC
Q 011536 242 PYEGLLAAKFEYECKMRG 259 (483)
Q Consensus 242 ~tE~el~a~~~~~~~~~G 259 (483)
|+|.++...+...+...|
T Consensus 1 m~E~~iq~~i~~~~~~~~ 18 (100)
T PF08774_consen 1 MRESDIQVAIVRWLRKHG 18 (100)
T ss_pred CCHHHHHHHHHHHHHHhC
Confidence 789999999998888777
Done!