Query 011537
Match_columns 483
No_of_seqs 280 out of 1489
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 10:11:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011537.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011537hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k2o_A Bifunctional arginine d 100.0 4.6E-50 1.6E-54 410.1 21.4 268 7-315 44-330 (336)
2 4gjz_A Lysine-specific demethy 100.0 6.6E-48 2.3E-52 370.2 18.4 228 9-282 2-234 (235)
3 3kv9_A JMJC domain-containing 100.0 1E-42 3.5E-47 359.9 22.2 336 8-427 45-387 (397)
4 3k3o_A PHF8, PHD finger protei 100.0 2.9E-42 1E-46 353.8 24.5 338 8-430 17-362 (371)
5 2yu1_A JMJC domain-containing 100.0 2.3E-43 7.8E-48 371.4 14.2 258 5-298 49-315 (451)
6 3al5_A HTYW5, JMJC domain-cont 100.0 2.8E-42 9.7E-47 353.2 17.7 236 7-286 28-277 (338)
7 3kv5_D JMJC domain-containing 100.0 1.2E-40 4E-45 354.9 23.0 335 8-427 136-478 (488)
8 3pua_A GRC5, PHD finger protei 100.0 8.5E-41 2.9E-45 344.7 17.9 242 8-298 44-293 (392)
9 3kv4_A PHD finger protein 8; e 100.0 2.3E-39 8E-44 340.6 24.8 333 10-427 103-443 (447)
10 3d8c_A Hypoxia-inducible facto 100.0 7.4E-40 2.5E-44 336.7 18.0 237 7-285 39-300 (349)
11 3pur_A Lysine-specific demethy 100.0 1.4E-30 4.8E-35 275.5 19.2 246 19-297 152-414 (528)
12 1vrb_A Putative asparaginyl hy 99.9 5.9E-25 2E-29 225.3 15.2 211 17-281 27-252 (342)
13 2xdv_A MYC-induced nuclear ant 99.8 1.4E-19 4.7E-24 191.0 10.6 92 174-282 140-235 (442)
14 4diq_A Lysine-specific demethy 99.7 2.8E-16 9.5E-21 166.2 20.8 106 175-293 166-274 (489)
15 2ypd_A Probable JMJC domain-co 99.7 1.8E-17 6E-22 169.1 6.4 254 8-295 10-339 (392)
16 3avr_A Lysine-specific demethy 98.8 9.8E-08 3.4E-12 101.9 19.2 109 175-291 262-380 (531)
17 2xxz_A Lysine-specific demethy 98.5 1.4E-07 4.7E-12 95.5 7.4 109 174-289 202-319 (332)
18 4ask_A Lysine-specific demethy 98.4 2.7E-06 9.4E-11 89.7 14.6 107 175-288 237-352 (510)
19 3dxt_A JMJC domain-containing 98.3 3.2E-07 1.1E-11 93.3 4.3 114 175-289 178-302 (354)
20 2ox0_A JMJC domain-containing 97.8 1E-05 3.4E-10 83.3 4.6 113 175-288 196-319 (381)
21 3opt_A DNA damage-responsive t 97.8 1.6E-05 5.4E-10 81.4 5.7 115 175-290 221-346 (373)
22 3eqe_A Putative cystein deoxyg 95.2 0.063 2.1E-06 49.2 8.7 72 181-280 77-148 (171)
23 3lag_A Uncharacterized protein 94.8 0.019 6.6E-07 47.4 3.7 25 250-274 60-84 (98)
24 1fxz_A Glycinin G1; proglycini 94.3 0.14 4.8E-06 54.2 9.8 73 176-280 342-414 (476)
25 2e9q_A 11S globulin subunit be 94.3 0.11 3.8E-06 54.8 8.8 69 177-277 327-395 (459)
26 3st7_A Capsular polysaccharide 94.2 0.1 3.4E-06 52.2 8.0 75 178-285 277-355 (369)
27 1dgw_A Canavalin; duplicated s 94.0 0.061 2.1E-06 49.2 5.4 63 177-274 46-108 (178)
28 3c3v_A Arachin ARAH3 isoform; 94.0 0.16 5.6E-06 54.2 9.4 72 177-280 377-448 (510)
29 3fz3_A Prunin; TREE NUT allerg 93.8 0.13 4.4E-06 55.0 8.3 71 176-278 398-468 (531)
30 3ksc_A LEGA class, prolegumin; 93.7 0.21 7.2E-06 53.1 9.6 70 177-278 363-432 (496)
31 2vqa_A SLL1358 protein, MNCA; 93.5 0.15 5.1E-06 51.2 7.9 65 177-274 57-121 (361)
32 3nw4_A Gentisate 1,2-dioxygena 93.3 0.064 2.2E-06 55.0 4.7 40 249-291 142-181 (368)
33 1fi2_A Oxalate oxidase, germin 93.1 0.22 7.5E-06 46.2 7.8 68 177-274 77-144 (201)
34 3eln_A Cysteine dioxygenase ty 93.0 0.29 9.8E-06 45.9 8.4 75 181-280 78-156 (200)
35 2d40_A Z3393, putative gentisa 92.6 0.25 8.4E-06 50.2 7.8 31 250-280 307-337 (354)
36 3uss_A Putative uncharacterize 92.4 0.38 1.3E-05 45.5 8.3 77 177-280 77-158 (211)
37 3kgl_A Cruciferin; 11S SEED gl 92.3 0.39 1.3E-05 50.7 9.1 66 177-274 328-393 (466)
38 2vqa_A SLL1358 protein, MNCA; 92.1 0.28 9.4E-06 49.3 7.5 26 249-274 278-303 (361)
39 2d5f_A Glycinin A3B4 subunit; 91.9 0.42 1.4E-05 50.8 8.9 72 177-280 372-443 (493)
40 3bu7_A Gentisate 1,2-dioxygena 91.7 0.38 1.3E-05 49.7 8.1 25 249-273 332-356 (394)
41 1x82_A Glucose-6-phosphate iso 91.7 0.2 6.8E-06 46.2 5.4 27 248-274 118-144 (190)
42 3fjs_A Uncharacterized protein 91.3 0.45 1.6E-05 39.8 6.8 31 250-280 75-105 (114)
43 3qac_A 11S globulin SEED stora 91.3 0.53 1.8E-05 49.7 8.7 69 177-277 328-396 (465)
44 4e2g_A Cupin 2 conserved barre 91.2 0.34 1.2E-05 40.5 6.0 61 182-280 50-111 (126)
45 2phl_A Phaseolin; plant SEED s 91.1 0.39 1.3E-05 49.7 7.3 71 178-274 245-315 (397)
46 1yhf_A Hypothetical protein SP 91.0 0.61 2.1E-05 38.2 7.3 31 250-280 79-109 (115)
47 1uij_A Beta subunit of beta co 91.0 0.39 1.3E-05 49.9 7.3 79 177-274 254-332 (416)
48 3ibm_A Cupin 2, conserved barr 90.9 0.67 2.3E-05 41.7 8.0 24 250-273 95-118 (167)
49 3nw4_A Gentisate 1,2-dioxygena 90.9 0.5 1.7E-05 48.4 7.9 32 249-280 317-348 (368)
50 2ea7_A 7S globulin-1; beta bar 90.9 0.3 1E-05 51.1 6.4 63 176-273 65-127 (434)
51 3ejk_A DTDP sugar isomerase; Y 90.8 1.2 4.1E-05 40.8 9.7 72 177-274 57-131 (174)
52 1uij_A Beta subunit of beta co 90.8 0.23 7.7E-06 51.7 5.3 63 176-273 53-115 (416)
53 2gm6_A Cysteine dioxygenase ty 90.7 0.63 2.1E-05 43.8 7.9 78 176-280 82-164 (208)
54 3bu7_A Gentisate 1,2-dioxygena 90.7 0.34 1.2E-05 50.0 6.5 26 250-275 163-189 (394)
55 2o8q_A Hypothetical protein; c 90.3 0.58 2E-05 39.7 6.7 56 182-274 52-108 (134)
56 1lr5_A Auxin binding protein 1 90.1 0.7 2.4E-05 40.8 7.4 64 181-273 49-112 (163)
57 3kgz_A Cupin 2 conserved barre 90.1 0.68 2.3E-05 41.3 7.3 25 250-274 83-107 (156)
58 2ozj_A Cupin 2, conserved barr 90.0 0.81 2.8E-05 37.6 7.2 31 250-280 77-107 (114)
59 2ea7_A 7S globulin-1; beta bar 89.9 0.37 1.3E-05 50.3 6.1 78 177-274 271-348 (434)
60 1yfu_A 3-hydroxyanthranilate-3 89.8 1.6 5.6E-05 39.9 9.5 73 172-278 34-107 (174)
61 1v70_A Probable antibiotics sy 89.7 0.37 1.3E-05 38.2 4.7 25 250-274 68-92 (105)
62 1o5u_A Novel thermotoga mariti 89.7 0.34 1.1E-05 40.2 4.5 26 250-275 69-94 (101)
63 1j58_A YVRK protein; cupin, de 89.5 0.45 1.5E-05 48.2 6.2 65 177-275 84-148 (385)
64 1zvf_A 3-hydroxyanthranilate 3 89.3 2 6.8E-05 39.4 9.6 76 173-278 34-109 (176)
65 2cav_A Protein (canavalin); vi 89.3 0.66 2.3E-05 48.6 7.4 76 177-274 286-361 (445)
66 2fqp_A Hypothetical protein BP 89.2 0.3 1E-05 39.4 3.8 25 250-274 60-84 (97)
67 2oa2_A BH2720 protein; 1017534 89.2 0.49 1.7E-05 41.3 5.5 62 182-274 52-113 (148)
68 3h8u_A Uncharacterized conserv 89.1 0.34 1.2E-05 40.6 4.3 26 250-275 80-105 (125)
69 2pfw_A Cupin 2, conserved barr 88.9 0.52 1.8E-05 38.7 5.2 31 250-280 73-103 (116)
70 3d82_A Cupin 2, conserved barr 88.9 0.3 1E-05 39.0 3.6 29 250-278 69-97 (102)
71 2y0o_A Probable D-lyxose ketol 88.8 1 3.5E-05 41.3 7.4 85 177-278 58-148 (175)
72 4axo_A EUTQ, ethanolamine util 88.2 0.44 1.5E-05 42.7 4.4 31 250-280 103-133 (151)
73 1j58_A YVRK protein; cupin, de 88.1 0.74 2.5E-05 46.6 6.7 26 249-274 301-326 (385)
74 3jzv_A Uncharacterized protein 88.0 0.7 2.4E-05 41.7 5.7 25 250-274 92-116 (166)
75 4i4a_A Similar to unknown prot 88.0 1.5 5.2E-05 36.6 7.6 25 250-274 73-97 (128)
76 3bb6_A Uncharacterized protein 87.9 2.1 7.1E-05 37.3 8.4 63 194-284 38-100 (127)
77 3l2h_A Putative sugar phosphat 87.7 1.7 5.8E-05 38.2 8.0 25 250-274 87-112 (162)
78 2gu9_A Tetracenomycin polyketi 87.6 0.52 1.8E-05 38.1 4.3 25 250-274 63-87 (113)
79 1y3t_A Hypothetical protein YX 87.1 1.4 4.7E-05 43.4 7.8 72 181-290 54-125 (337)
80 2xlg_A SLL1785 protein, CUCA; 87.0 0.83 2.8E-05 43.9 6.0 29 247-275 100-128 (239)
81 2q30_A Uncharacterized protein 87.0 0.62 2.1E-05 37.6 4.4 27 250-276 75-101 (110)
82 2cav_A Protein (canavalin); vi 86.6 0.73 2.5E-05 48.3 5.7 62 177-273 91-152 (445)
83 2opk_A Hypothetical protein; p 86.2 0.83 2.8E-05 38.1 4.8 24 251-274 75-98 (112)
84 2d40_A Z3393, putative gentisa 86.0 0.58 2E-05 47.5 4.5 26 250-275 140-165 (354)
85 1y3t_A Hypothetical protein YX 86.0 2.1 7.2E-05 42.0 8.5 39 250-289 258-296 (337)
86 2bnm_A Epoxidase; oxidoreducta 85.9 2.8 9.6E-05 37.8 8.7 25 250-274 163-188 (198)
87 2b8m_A Hypothetical protein MJ 85.8 0.99 3.4E-05 37.3 5.1 56 182-275 36-92 (117)
88 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 85.4 2 6.9E-05 40.1 7.5 39 240-280 102-140 (197)
89 3i7d_A Sugar phosphate isomera 85.3 2.3 7.7E-05 37.9 7.6 25 250-274 84-110 (163)
90 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 85.3 2 6.7E-05 39.7 7.3 37 247-284 98-136 (185)
91 2ixk_A DTDP-4-dehydrorhamnose 85.0 2.1 7.2E-05 39.5 7.3 37 247-284 99-137 (184)
92 1juh_A Quercetin 2,3-dioxygena 84.9 3.9 0.00013 41.1 10.0 40 250-290 95-134 (350)
93 3ht1_A REMF protein; cupin fol 84.8 0.81 2.8E-05 39.0 4.2 25 250-274 80-104 (145)
94 2qnk_A 3-hydroxyanthranilate 3 84.8 9.7 0.00033 37.4 12.2 75 172-280 30-104 (286)
95 2i45_A Hypothetical protein; n 84.7 0.71 2.4E-05 37.6 3.7 27 250-276 68-94 (107)
96 3lwc_A Uncharacterized protein 84.1 0.8 2.7E-05 38.9 3.8 24 250-273 78-101 (119)
97 3cew_A Uncharacterized cupin p 83.2 1.4 4.6E-05 36.9 4.9 25 250-274 67-91 (125)
98 1dzr_A DTDP-4-dehydrorhamnose 82.9 2.9 9.8E-05 38.5 7.3 29 247-275 98-128 (183)
99 3bcw_A Uncharacterized protein 82.6 0.79 2.7E-05 39.4 3.2 28 250-277 88-115 (123)
100 2ozi_A Hypothetical protein RP 82.6 0.49 1.7E-05 39.0 1.7 25 250-274 60-84 (98)
101 1upi_A DTDP-4-dehydrorhamnose 81.7 5.6 0.00019 37.8 9.0 29 247-275 117-147 (225)
102 3rns_A Cupin 2 conserved barre 81.4 3.5 0.00012 38.6 7.5 62 181-280 45-106 (227)
103 2pyt_A Ethanolamine utilizatio 81.3 1.4 4.7E-05 38.3 4.3 28 250-277 94-121 (133)
104 1o4t_A Putative oxalate decarb 81.2 1.6 5.5E-05 37.2 4.7 25 250-274 97-121 (133)
105 1oi6_A PCZA361.16; epimerase, 81.0 5 0.00017 37.6 8.3 34 240-275 93-128 (205)
106 1wlt_A 176AA long hypothetical 80.9 4.5 0.00015 37.7 7.9 34 247-280 116-151 (196)
107 1fxz_A Glycinin G1; proglycini 80.8 2.8 9.5E-05 44.3 7.2 86 177-274 53-138 (476)
108 3qac_A 11S globulin SEED stora 80.7 3.4 0.00012 43.5 7.8 94 177-274 55-155 (465)
109 3h7j_A Bacilysin biosynthesis 80.3 2 7E-05 40.6 5.5 25 250-274 73-98 (243)
110 2c0z_A NOVW; isomerase, epimer 79.4 4.3 0.00015 38.4 7.3 29 247-275 106-136 (216)
111 2rg4_A Uncharacterized protein 79.2 4.5 0.00016 37.9 7.5 36 249-284 169-207 (216)
112 3h7j_A Bacilysin biosynthesis 79.1 1.9 6.4E-05 40.9 4.8 31 250-280 185-217 (243)
113 2f4p_A Hypothetical protein TM 79.1 4 0.00014 35.4 6.7 24 251-274 89-112 (147)
114 1vj2_A Novel manganese-contain 79.1 1.5 5.2E-05 36.9 3.8 25 250-274 87-111 (126)
115 2e9q_A 11S globulin subunit be 79.0 2.7 9.3E-05 44.2 6.4 85 177-274 68-152 (459)
116 3rns_A Cupin 2 conserved barre 78.9 3.1 0.00011 39.0 6.2 27 250-276 192-219 (227)
117 1y9q_A Transcriptional regulat 78.2 2 6.8E-05 38.8 4.5 28 250-277 145-172 (192)
118 4b29_A Dimethylsulfoniopropion 77.8 5.1 0.00017 37.9 7.3 62 177-276 137-198 (217)
119 2d5f_A Glycinin A3B4 subunit; 77.4 3.4 0.00012 43.8 6.7 89 176-274 49-138 (493)
120 3s7i_A Allergen ARA H 1, clone 76.8 4.3 0.00015 42.1 7.1 63 177-274 49-111 (418)
121 1vr3_A Acireductone dioxygenas 76.6 3.2 0.00011 38.5 5.4 55 187-274 98-152 (191)
122 2vpv_A Protein MIF2, MIF2P; nu 76.5 3.2 0.00011 37.6 5.3 29 250-278 129-157 (166)
123 3ryk_A DTDP-4-dehydrorhamnose 76.0 8.2 0.00028 36.2 8.1 33 247-279 121-155 (205)
124 3s7i_A Allergen ARA H 1, clone 75.8 3.9 0.00013 42.5 6.4 89 177-274 268-357 (418)
125 3kgl_A Cruciferin; 11S SEED gl 73.6 5.5 0.00019 41.9 6.9 24 251-274 147-170 (466)
126 4hn1_A Putative 3-epimerase in 72.2 21 0.00072 33.3 9.8 38 241-280 91-130 (201)
127 3dl3_A Tellurite resistance pr 71.7 16 0.00055 31.3 8.2 63 194-285 37-99 (119)
128 1zrr_A E-2/E-2' protein; nicke 70.9 2 6.9E-05 39.4 2.5 28 247-274 120-147 (179)
129 1sef_A Conserved hypothetical 69.4 10 0.00035 36.4 7.4 25 250-274 222-246 (274)
130 1juh_A Quercetin 2,3-dioxygena 68.0 4 0.00014 41.0 4.3 26 250-275 292-317 (350)
131 1rc6_A Hypothetical protein YL 67.7 3.7 0.00013 39.2 3.8 25 250-274 219-243 (261)
132 3c3v_A Arachin ARAH3 isoform; 67.6 4.3 0.00015 43.2 4.6 94 176-275 52-152 (510)
133 2phl_A Phaseolin; plant SEED s 66.3 6.8 0.00023 40.3 5.6 63 176-273 56-124 (397)
134 1sq4_A GLXB, glyoxylate-induce 65.3 4.2 0.00014 39.5 3.7 25 250-274 109-133 (278)
135 2pa7_A DTDP-6-deoxy-3,4-keto-h 64.7 23 0.00079 31.0 8.0 66 181-279 43-110 (141)
136 3ksc_A LEGA class, prolegumin; 63.4 13 0.00044 39.4 7.2 85 177-274 51-135 (496)
137 1sfn_A Conserved hypothetical 60.8 6.3 0.00022 37.4 3.9 26 250-275 205-230 (246)
138 4h7l_A Uncharacterized protein 60.5 4.5 0.00015 36.4 2.6 22 250-271 87-108 (157)
139 1rc6_A Hypothetical protein YL 60.1 6.4 0.00022 37.5 3.8 25 250-274 100-124 (261)
140 4e2q_A Ureidoglycine aminohydr 58.0 7.5 0.00026 37.9 3.9 25 250-274 226-250 (266)
141 1sef_A Conserved hypothetical 57.8 7.4 0.00025 37.4 3.9 26 250-275 103-128 (274)
142 3es1_A Cupin 2, conserved barr 57.7 6.3 0.00021 35.8 3.1 27 250-277 119-145 (172)
143 3d0j_A Uncharacterized protein 57.1 7.7 0.00026 34.2 3.4 30 249-278 76-105 (140)
144 2arc_A ARAC, arabinose operon 55.4 13 0.00043 31.7 4.6 24 250-273 57-80 (164)
145 1zx5_A Mannosephosphate isomer 55.3 7.2 0.00025 38.5 3.3 31 249-280 158-188 (300)
146 3fz3_A Prunin; TREE NUT allerg 53.3 8.9 0.0003 41.0 3.8 25 251-275 174-198 (531)
147 3es4_A Uncharacterized protein 53.0 6.5 0.00022 33.5 2.3 25 250-274 81-105 (116)
148 1qwr_A Mannose-6-phosphate iso 51.9 6.8 0.00023 39.0 2.5 23 249-271 158-180 (319)
149 2wfp_A Mannose-6-phosphate iso 51.2 11 0.00038 38.7 4.1 31 249-280 240-270 (394)
150 1sq4_A GLXB, glyoxylate-induce 49.5 8.8 0.0003 37.2 2.9 25 250-274 231-255 (278)
151 1pmi_A PMI, phosphomannose iso 48.8 13 0.00045 38.7 4.2 32 249-281 266-297 (440)
152 1sfn_A Conserved hypothetical 45.1 12 0.00042 35.3 3.1 25 250-274 87-111 (246)
153 3i3q_A Alpha-ketoglutarate-dep 43.5 91 0.0031 28.9 8.8 38 248-285 155-204 (211)
154 4e2q_A Ureidoglycine aminohydr 38.7 20 0.0007 34.7 3.6 25 250-274 110-134 (266)
155 2o1q_A Putative acetyl/propion 38.0 19 0.00064 31.3 2.9 30 251-280 86-116 (145)
156 2qnk_A 3-hydroxyanthranilate 3 37.2 38 0.0013 33.2 5.2 33 249-281 244-276 (286)
157 1dgw_Y Canavalin; duplicated s 36.9 25 0.00085 28.7 3.3 28 247-274 4-31 (93)
158 1yud_A Hypothetical protein SO 34.7 24 0.00081 32.0 3.1 20 253-272 101-122 (170)
159 3myx_A Uncharacterized protein 31.7 24 0.00082 33.7 2.7 16 250-265 206-221 (238)
160 3gbg_A TCP pilus virulence reg 29.8 57 0.0019 30.4 5.1 23 250-272 50-72 (276)
161 3ebr_A Uncharacterized RMLC-li 29.1 33 0.0011 30.4 3.1 28 252-279 81-112 (159)
162 3cjx_A Protein of unknown func 26.0 50 0.0017 29.5 3.6 35 252-286 83-126 (165)
163 2q1z_B Anti-sigma factor CHRR, 24.1 53 0.0018 29.9 3.5 30 251-280 161-192 (195)
164 3kmh_A D-lyxose isomerase; cup 22.3 98 0.0034 29.6 5.0 87 177-274 110-197 (246)
165 3s57_A Alpha-ketoglutarate-dep 22.3 87 0.003 28.7 4.6 36 247-282 158-201 (204)
No 1
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=100.00 E-value=4.6e-50 Score=410.06 Aligned_cols=268 Identities=26% Similarity=0.445 Sum_probs=217.2
Q ss_pred CCceeeecCCCCCHHHHHHHHhCCCCcEEEEcCCCCccccccCcccCCCCchhHHHhhhCCceEEEEeCCcccccCccee
Q 011537 7 GGQIEKLNGKEVSYSEFVEKYMAKNQPVVLTGLMDDWRACKDWVTENGQPNLLFFSTHFGKSKVQVADCGIREFTDQKRV 86 (483)
Q Consensus 7 ~~~IeRi~~~~lS~eeF~~~yl~~nkPVII~g~~~~WpA~~~Wt~~~~~~n~dyL~~~~Gd~~V~V~d~~~~~f~~~~~~ 86 (483)
.++|+|++++.+|+++|.++|+.+++||||+|++++|||+++|+ ++||+++||+..|+|.... ++...
T Consensus 44 ~~~I~Ri~~~~lS~eeF~~~y~~~~~PvVi~g~~~~WpA~~~Wt-------~~yL~~~~G~~~V~v~~~~-----~~~~~ 111 (336)
T 3k2o_A 44 ADNVERADALQLSVEEFVERYERPYKPVVLLNAQEGWSAQEKWT-------LERLKRKYRNQKFKCGEDN-----DGYSV 111 (336)
T ss_dssp CCCCCEEEGGGCCHHHHHHHTTTTTCCEEEESTTTTCTHHHHCS-------HHHHHHHSTTCEEEEEECT-----TSCEE
T ss_pred CCCCCEecCCCCCHHHHHHHhhccCCCEEEeCCcCCChhHhhhh-------HHHHHHHhCCceEEEEecC-----CCcee
Confidence 47899998778999999999999999999999999999999998 5999999999999997542 23468
Q ss_pred eecHHHHHHHHHhccccccccccccccCCCcceeeeeccccc--cCCccc-cccCCccccchhHHHhhhhcccCCCCccc
Q 011537 87 EMSVSEFVKNWLENSIMENSNASTNEANDKSVLYLKDWHFAK--EYPEYV-AYRTPLIFCDDWLNMYLDHFRLHKDPESY 163 (483)
Q Consensus 87 ~m~l~efl~~~~~~~~~~~~~as~~~~~~~~~lYL~d~~~~~--~~P~l~-~y~~P~~f~dDwln~~~d~~~~~~~pd~~ 163 (483)
.|+|++|++++.+. .++.++||+++++.. ++|+|. +|.+|.+|.+|+++....
T Consensus 112 ~m~~~~fl~~~~~~-------------~~~~~lYL~d~~~~e~~~~p~L~~dy~~P~~f~~d~~~~~~~----------- 167 (336)
T 3k2o_A 112 KMKMKYYIEYMEST-------------RDDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDLFQYAGE----------- 167 (336)
T ss_dssp EEEHHHHHHHHHHC-------------CCSSCCCEEESCGGGSTTGGGGGGGCCCCGGGCCCGGGGGCT-----------
T ss_pred eecHHHHHHHHHhc-------------CCCCCceEecccccccccchhHHHhcCCCcccccchhhhccc-----------
Confidence 99999999999863 245689999998864 468876 799999999998863211
Q ss_pred cccCCccCCCccEEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCC--CccccccCCCCcccCC
Q 011537 164 QKDNDICCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLK--GCVYNIFDDVSETDFP 241 (483)
Q Consensus 164 ~~~~~i~~~dyr~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~--s~~~di~d~~d~~~fP 241 (483)
..+++++|+|||++||+|++|+|+++|.+|++||.|+|+|+||||.+...||..... +...+..-+.....||
T Consensus 168 -----~~~p~~~~~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P 242 (336)
T 3k2o_A 168 -----KRRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYP 242 (336)
T ss_dssp -----TTSCCCEEEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGG
T ss_pred -----ccCCCceEEEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCc
Confidence 124788999999999999999999999999999999999999999998888764311 0000000000123455
Q ss_pred CCC------CceeEEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCCChHHHHHHHH--------HHHHHHHHHHH
Q 011537 242 GFK------KTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLL--------RDYNEAKEYIE 307 (483)
Q Consensus 242 ~~~------~a~~~e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~nl~~~~~~l~--------~~l~~~~~~~~ 307 (483)
.++ .+++++|+|+|||+||||+||||+|.|+++|||||+||+++.|++.+|..++ +.++++++.+.
T Consensus 243 ~~~~~~~p~~~~~~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~~nl~~~~~~~~~~~p~~~~~~~~~~~~~~p 322 (336)
T 3k2o_A 243 RTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPVVWHKTVRGRPKLSRKWYRILKQEHP 322 (336)
T ss_dssp GGGSTTSCGGGCCEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCTTTHHHHHHHHHHHCHHHHHHHHHHHHHHCH
T ss_pred chhhhcccccCceEEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCcccHHHHHHHHHhhChHHHHHHHHHHHHhCc
Confidence 543 4688999999999999999999999999999999999999999999999874 34566666666
Q ss_pred HHHHhhhh
Q 011537 308 DIRDICDD 315 (483)
Q Consensus 308 d~~~~~~~ 315 (483)
|+.+++++
T Consensus 323 ~~~~~~~~ 330 (336)
T 3k2o_A 323 ELAVLADS 330 (336)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHhh
Confidence 66666553
No 2
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=100.00 E-value=6.6e-48 Score=370.24 Aligned_cols=228 Identities=23% Similarity=0.432 Sum_probs=189.1
Q ss_pred ceeeecCCCCCHHHHHHHHhCCCCcEEEEcCCCCccccccCcccCCCCchhHHHhhhCCceEEEEeCCcccccCcceeee
Q 011537 9 QIEKLNGKEVSYSEFVEKYMAKNQPVVLTGLMDDWRACKDWVTENGQPNLLFFSTHFGKSKVQVADCGIREFTDQKRVEM 88 (483)
Q Consensus 9 ~IeRi~~~~lS~eeF~~~yl~~nkPVII~g~~~~WpA~~~Wt~~~~~~n~dyL~~~~Gd~~V~V~d~~~~~f~~~~~~~m 88 (483)
+|+|++. +|+++|+++|+.+++||||+|++++|||+++|+ ++||++++|+..|+|..+............|
T Consensus 2 tipri~~--pS~~eF~~~y~~~~~Pvvi~g~~~~wpa~~~w~-------~~yL~~~~g~~~v~v~~~~~~~~~~~~~~~~ 72 (235)
T 4gjz_A 2 TVPRLHR--PSLQHFREQFLVPGRPVILKGVADHWPCMQKWS-------LEYIQEIAGCRTVPVEVGSRYTDEEWSQTLM 72 (235)
T ss_dssp BCCEEES--CCHHHHHHHTTTTTCCEEEESSSTTSHHHHHCS-------HHHHHHHHTTSEEEEEEC-------CEEEEE
T ss_pred CCCCCCC--CCHHHHHHHHhcCCCcEEEeCCCcCCcccccCC-------HHHHHHHcCCCeEEEEecCcccCCccceeec
Confidence 7999994 999999999999999999999999999999998 5999999999999998876543444567899
Q ss_pred cHHHHHHHHHhccccccccccccccCCCcceeeeeccccccCCccc-cccCCccccchhHHHhhhhcccCCCCccccccC
Q 011537 89 SVSEFVKNWLENSIMENSNASTNEANDKSVLYLKDWHFAKEYPEYV-AYRTPLIFCDDWLNMYLDHFRLHKDPESYQKDN 167 (483)
Q Consensus 89 ~l~efl~~~~~~~~~~~~~as~~~~~~~~~lYL~d~~~~~~~P~l~-~y~~P~~f~dDwln~~~d~~~~~~~pd~~~~~~ 167 (483)
+|++|++++... ......|+.++++....|++. ++.+|.++..+...
T Consensus 73 ~~~~~~~~~~~~-------------~~~~~~y~~~~~~~~~~~~l~~d~~~p~~~~~~~~~------------------- 120 (235)
T 4gjz_A 73 TVNEFISKYIVN-------------EPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDGE------------------- 120 (235)
T ss_dssp EHHHHHHHHTSS-------------CCSSCEEEEEECHHHHCHHHHTTCCCCGGGGGSSSC-------------------
T ss_pred cHHHHHHHHhhc-------------CCcccceeehhhhhhhhHHHHHhhcCCccccccccc-------------------
Confidence 999999988653 245689999999988888875 57777765422110
Q ss_pred CccCCCccEEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCC----CccccccCCCCcccCCCC
Q 011537 168 DICCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLK----GCVYNIFDDVSETDFPGF 243 (483)
Q Consensus 168 ~i~~~dyr~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~----s~~~di~d~~d~~~fP~~ 243 (483)
..+...++|||++||+|++|+|+++|+ ++||.|+|+|+|+||.+...+|+.... .+..| .+.+|.++||++
T Consensus 121 --~~~~~~~~wiG~~gs~t~~H~D~~~n~--~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd-~~~~d~~~~p~~ 195 (235)
T 4gjz_A 121 --EEEITINAWFGPQGTISPLHQDPQQNF--LVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVD-VENPDLEKFPKF 195 (235)
T ss_dssp --GGGCEEEEEEECTTCEEEEECCSSEEE--EEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSC-TTSCCTTTCGGG
T ss_pred --cCccceEEEEeCCCCCceeeeccccce--EEEEeeeEeeEEcCcccccccccCcccccCcccccc-ccCcchhhCccc
Confidence 113456899999999999999998765 999999999999999999999875421 22333 356789999999
Q ss_pred CCceeEEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeec
Q 011537 244 KKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNW 282 (483)
Q Consensus 244 ~~a~~~e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf 282 (483)
+++++++|+|+|||+||||+||||+|+|+++|||||+||
T Consensus 196 ~~~~~~~~~l~pGD~LyiP~gW~H~V~~l~~sisvn~w~ 234 (235)
T 4gjz_A 196 AKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWW 234 (235)
T ss_dssp GGCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEE
T ss_pred cCCCcEEEEECCCCEEEeCCCCcEEEEECCCEEEEEEec
Confidence 999999999999999999999999999999999999987
No 3
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=100.00 E-value=1e-42 Score=359.92 Aligned_cols=336 Identities=17% Similarity=0.236 Sum_probs=243.2
Q ss_pred CceeeecCCCCCHHHHHHHHhCCCCcEEEEcCC---CCccccccCcccCCCCchhHHHhhhC-CceEEEEeCCcccccCc
Q 011537 8 GQIEKLNGKEVSYSEFVEKYMAKNQPVVLTGLM---DDWRACKDWVTENGQPNLLFFSTHFG-KSKVQVADCGIREFTDQ 83 (483)
Q Consensus 8 ~~IeRi~~~~lS~eeF~~~yl~~nkPVII~g~~---~~WpA~~~Wt~~~~~~n~dyL~~~~G-d~~V~V~d~~~~~f~~~ 83 (483)
+.|.+++++++|.+.|.+.. -++||||++.. ..||+ .+|+ ++|+++.+| +..|+|.+|.+ +
T Consensus 45 ~~v~~i~g~d~t~~y~~~~~--~~~Pvli~~~~glg~~~P~-~~~t-------v~~v~~~vG~d~~V~ViDv~~-----Q 109 (397)
T 3kv9_A 45 EIIIKMHGSQLTQRYLEKHG--FDVPIMVPKLDDLGLRLPS-PTFS-------VMDVERYVGGDKVIDVIDVAR-----Q 109 (397)
T ss_dssp GTCEECCTTTCCHHHHHHHC--SCSCEEESSCTTSCCBCCC-TTCC-------HHHHHHHHTTTSEEEEEETTT-----T
T ss_pred HeeecCCHHHhhHHHHHhcC--CCCcEEEecCccccCcCCC-CCCC-------HHHHHHHhCCCceEeeeecCc-----c
Confidence 46999999999998776653 48999999754 58998 7998 599999999 89999999974 4
Q ss_pred ceeeecHHHHHHHHHhccccccccccccccCCCcceeeeeccccccCCccccccCCccccc-hhHHHhhhhcccCCCCcc
Q 011537 84 KRVEMSVSEFVKNWLENSIMENSNASTNEANDKSVLYLKDWHFAKEYPEYVAYRTPLIFCD-DWLNMYLDHFRLHKDPES 162 (483)
Q Consensus 84 ~~~~m~l~efl~~~~~~~~~~~~~as~~~~~~~~~lYL~d~~~~~~~P~l~~y~~P~~f~d-Dwln~~~d~~~~~~~pd~ 162 (483)
...+|+|++|++|+++. .+..++|+.++++... +-...|.+|.+|++ ||++.+|.....
T Consensus 110 ~~~~M~l~~yv~Y~~~~-------------~r~~~lnvislefs~~-~L~~~~~~P~~v~d~Dwv~~~wp~~~~------ 169 (397)
T 3kv9_A 110 ADSKMTLHNYVKYFMNP-------------NRPKVLNVISLEFSDT-KMSELVEVPDIAKKLSWVENYWPDDSV------ 169 (397)
T ss_dssp EEEEEEHHHHHHHHHCS-------------SCSSCEEEEEEECTTS-GGGGGCBCCHHHHHHCHHHHHCCTTCS------
T ss_pred cCccccHHHHHHHHhcc-------------CCCccceecchhhccc-hhccCcCCCceeeccchhhhcCCchhc------
Confidence 57899999999999874 2567999999988743 32236899999995 999998743111
Q ss_pred ccccCCccCC-CccEEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcc-cccCCCCCCccccccCCCCcccC
Q 011537 163 YQKDNDICCS-DYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCH-LVFDRNLKGCVYNIFDDVSETDF 240 (483)
Q Consensus 163 ~~~~~~i~~~-dyr~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~-~Ly~~~~~s~~~di~d~~d~~~f 240 (483)
..+| .+||+|||++||+|++|+|++++++|++||+|+|+|+|+||++.+ .+|... ..+. .+.+.|
T Consensus 170 ------~~rP~v~r~l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~-~~s~------~~~e~~ 236 (397)
T 3kv9_A 170 ------FPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESW-SSSV------TQSEVF 236 (397)
T ss_dssp ------SCCCCCSCEEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHH-HTSG------GGGGSC
T ss_pred ------cCCccceeEEEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCccccccccccc-ccCC------Ccchhh
Confidence 1123 468999999999999999999999999999999999999999876 445321 0111 112234
Q ss_pred CCCCCceeEEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 011537 241 PGFKKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRDYNEAKEYIEDIRDICDDFEGLC 320 (483)
Q Consensus 241 P~~~~a~~~e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~nl~~~~~~l~~~l~~~~~~~~d~~~~~~~f~~~c 320 (483)
+....+++++|+|+|||+||||+||||+|.|+++||+|++||++++|++.+|+...-
T Consensus 237 ~~~~~~~~~~v~l~pGe~lfIPsGW~H~V~nledSIai~~NFl~~~nl~~~l~~~~~----------------------- 293 (397)
T 3kv9_A 237 FGDKVDKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEM----------------------- 293 (397)
T ss_dssp GGGGSSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHH-----------------------
T ss_pred hccccCceEEEEECCCCEEEeCCCCeEEccCCcCeEEECCcccCchhHHHHHHHHHH-----------------------
Confidence 433456899999999999999999999999999999999999999999999875431
Q ss_pred HHhhhhccCCCHHHHHHHHHHHhhhhHHHHHhhccccccccCCCCccccchhccHHHHHHHHHHhccccccccccchhhh
Q 011537 321 QRNLAANTGMNFYDFFSFLSRFSLVNVVILFHLRRDYENQIWSSSPVARHLALNLVSIQKIALKMKSVNDLAGSFGFFMY 400 (483)
Q Consensus 321 q~~~~~~~g~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (483)
+..++...++.|-.|..++-++|...+..|-...+... .-+.+.+==+..|...|..-+.-+......+-
T Consensus 294 E~~~k~~~~~~fp~F~~~~w~~a~~~l~~~~~~~~~~~-------~~~~~~~~g~~~l~~~~~~w~~~~~~~~~~~~--- 363 (397)
T 3kv9_A 294 EKRLKTPDLFKFPFFEAICWFVAKNLLETLKELREDGF-------QPQTYLVQGVKALHTALKLWMKKELVSEHAFE--- 363 (397)
T ss_dssp HHHHTCGGGGGSTTHHHHHHHHHHHHHHHHHHHHTTTC-------CCCHHHHHHHHHHHHHHHHHTSTTTGGGTGGG---
T ss_pred HHhcCCCccCcCccHHHHHHHHHHHHHHHHHHHHhcCC-------CCcHHHHHHHHHHHHHHHHHHhcccccccccc---
Confidence 12466788888999999999888888777744322111 11233333344445555554444433332221
Q ss_pred hHHhcCChhHHHHHhhhhHHHhhhhhh
Q 011537 401 LKETLDDPEFLKLCMGFCRTYGMIHEE 427 (483)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (483)
+=+.+ .=.+|.-+|+|--..+.+.
T Consensus 364 ~p~~~---~~~~~~~~l~~~~~~~~~~ 387 (397)
T 3kv9_A 364 IPDNV---RPGHLIKELSKVIRAIEEE 387 (397)
T ss_dssp SCTTC---CHHHHHHHHHHHHHHHHHC
T ss_pred CCCcC---CHHHHHHHHHHHHHHHHhh
Confidence 11222 2245556666655544433
No 4
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=100.00 E-value=2.9e-42 Score=353.76 Aligned_cols=338 Identities=17% Similarity=0.251 Sum_probs=240.0
Q ss_pred CceeeecCCCCCHHHHHHHHhCCCCcEEEEcCC---CCccccccCcccCCCCchhHHHhhhC-CceEEEEeCCcccccCc
Q 011537 8 GQIEKLNGKEVSYSEFVEKYMAKNQPVVLTGLM---DDWRACKDWVTENGQPNLLFFSTHFG-KSKVQVADCGIREFTDQ 83 (483)
Q Consensus 8 ~~IeRi~~~~lS~eeF~~~yl~~nkPVII~g~~---~~WpA~~~Wt~~~~~~n~dyL~~~~G-d~~V~V~d~~~~~f~~~ 83 (483)
+-|.+++++++|.+.|.+..+ ++||||++.. ..||+. +|+ ++|+++.+| +..|+|.++.+ +
T Consensus 17 ~~v~~i~~~d~t~~y~~~~~~--~~Pvli~~~~glg~~~P~~-~~t-------v~~v~~~vG~d~~V~ViDv~~-----Q 81 (371)
T 3k3o_A 17 EVILKPTGNQLTVEFLEENSF--SVPILVLKKDGLGMTLPSP-SFT-------VRDVEHYVGSDKEIDVIDVTR-----Q 81 (371)
T ss_dssp TTSBCCCTTTCCHHHHHHHTT--CSCEEESSCTTSCCBCCCT-TCC-------HHHHHHHHCC-CEEEEEETTT-----T
T ss_pred HhcccCChhhCcHHHHHhcCC--CCCEEEecCcccCCcCCCC-CCC-------HHHHHHHcCCCceEeeeecCc-----C
Confidence 568999999999988887654 8999999643 689987 898 599999999 89999999864 4
Q ss_pred ceeeecHHHHHHHHHhccccccccccccccCCCcceeeeeccccccCCccc-cccCCccccc-hhHHHhhhhcccCCCCc
Q 011537 84 KRVEMSVSEFVKNWLENSIMENSNASTNEANDKSVLYLKDWHFAKEYPEYV-AYRTPLIFCD-DWLNMYLDHFRLHKDPE 161 (483)
Q Consensus 84 ~~~~m~l~efl~~~~~~~~~~~~~as~~~~~~~~~lYL~d~~~~~~~P~l~-~y~~P~~f~d-Dwln~~~d~~~~~~~pd 161 (483)
...+|+|++|++|+++. .+..++|+.++++... .+. .|.+|.+|.+ ||++.+|.....
T Consensus 82 ~~~~M~l~~y~dY~~~~-------------~re~~lnv~d~efs~~--~L~~~~~~P~~~~d~d~~~~~wp~~~~----- 141 (371)
T 3k3o_A 82 ADCKMKLGDFVKYYYSG-------------KREKVLNVISLEFSDT--RLSNLVETPKIVRKLSWVENLWPEECV----- 141 (371)
T ss_dssp EEEEEEHHHHHHHHTCT-------------TCCSCEEEEEEECTTS--GGGGTCBCCHHHHHHCHHHHHSCSSCS-----
T ss_pred CCccccHHHHHHHHhcc-------------CCCCceeeechhccch--hhhccccCCchhhhhhhhhhcCChhhh-----
Confidence 56899999999999863 2467999999988753 343 6899999996 899988743211
Q ss_pred cccccCCccCCC-ccEEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCccc-ccCCCCCCccccccCCCCccc
Q 011537 162 SYQKDNDICCSD-YRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHL-VFDRNLKGCVYNIFDDVSETD 239 (483)
Q Consensus 162 ~~~~~~~i~~~d-yr~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~-Ly~~~~~s~~~di~d~~d~~~ 239 (483)
..+|+ +||+|||++||+|++|+|+++|++|+++|+|+|+|+|+||++.+. +|... .. ...+.+.
T Consensus 142 -------~~rP~~~r~l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~-~~------s~~~~e~ 207 (371)
T 3k3o_A 142 -------FERPNVQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECW-SS------SSNQNEM 207 (371)
T ss_dssp -------SCCCCCSCEEEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHH-HT------STTGGGS
T ss_pred -------ccCCCceeEEEEcCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCcccccccccc-cc------CCccchh
Confidence 12466 499999999999999999999999999999999999999998764 44321 00 1111233
Q ss_pred CCCCCCceeEEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 011537 240 FPGFKKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRDYNEAKEYIEDIRDICDDFEGL 319 (483)
Q Consensus 240 fP~~~~a~~~e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~nl~~~~~~l~~~l~~~~~~~~d~~~~~~~f~~~ 319 (483)
|+....+++++|+|+|||+||||+||||+|.|+++||+|++||++++|++.+|+..+-|.+. .... +-..+.|+.+
T Consensus 208 ~~~~~~~~~~ev~l~pGEtLfIPsGWwH~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~---~~~~-~f~fp~F~~~ 283 (371)
T 3k3o_A 208 FFGDQVDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRL---STAD-LFRFPNFETI 283 (371)
T ss_dssp CGGGTSSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHH---C-----CCCTTHHHH
T ss_pred hcccccCceEEEEECCCcEEEeCCCCeEEEecCCCeEEECCcccchhhHHHHHHHHHHHHhc---CCCc-ccccccHHHH
Confidence 44444578999999999999999999999999999999999999999999999977643210 0010 1123455555
Q ss_pred HHHhhhhccCCCHHHHHHHHHHHhhhhHHHHHhhccccccccCCCCccccchhccHHHHHHHHHHhccccccccccchhh
Q 011537 320 CQRNLAANTGMNFYDFFSFLSRFSLVNVVILFHLRRDYENQIWSSSPVARHLALNLVSIQKIALKMKSVNDLAGSFGFFM 399 (483)
Q Consensus 320 cq~~~~~~~g~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (483)
| |+--..+| .++..+ +..+. .-+.+.+-.+..|...|..-++.+++...++.+-
T Consensus 284 ~-----------w~~~~~~~-----~~~~~~----~~~~~------~~~~~~~~g~~~l~~~~~~w~~~~~~~~~~~~~~ 337 (371)
T 3k3o_A 284 C-----------WYVGKHIL-----DIFRGL----RENRR------HPASYLVHGGKALNLAFRAWTRKEALPDHEDEIP 337 (371)
T ss_dssp H-----------HHHHHHHH-----HHHHHH----HHTTC------CCCHHHHHHHHHHHHHHHHHHSTTTGGGTGGGSC
T ss_pred H-----------HHHHHHHH-----HHHHHH----HhcCC------CCcHHHHhhHHHHHHHHHHHHhhhhccchhhhcc
Confidence 5 22222222 222222 11111 1234566666777777777666666655433322
Q ss_pred hhHHhcCChhHHHHHhhhhHHHhhhhhhhhh
Q 011537 400 YLKETLDDPEFLKLCMGFCRTYGMIHEEEKW 430 (483)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (483)
|.=+=.+|..+|+|--..+.+..++
T Consensus 338 ------~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (371)
T 3k3o_A 338 ------ETVRTVQLIKDLAREIRLVEDIFQQ 362 (371)
T ss_dssp ------TTCCHHHHHHHHHHHHHHHHCTTC-
T ss_pred ------ccCCHHHHHHHHHHHHHHHHHhhhh
Confidence 2223457778888877766554443
No 5
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=100.00 E-value=2.3e-43 Score=371.38 Aligned_cols=258 Identities=17% Similarity=0.303 Sum_probs=190.3
Q ss_pred cCCCceeeecCCCCCHHHHHHHHhCCCCcEEEEcCCCCccc---cccCcccCCCCchhHHHhhhC-CceEEEEeCCcccc
Q 011537 5 IGGGQIEKLNGKEVSYSEFVEKYMAKNQPVVLTGLMDDWRA---CKDWVTENGQPNLLFFSTHFG-KSKVQVADCGIREF 80 (483)
Q Consensus 5 ~~~~~IeRi~~~~lS~eeF~~~yl~~nkPVII~g~~~~WpA---~~~Wt~~~~~~n~dyL~~~~G-d~~V~V~d~~~~~f 80 (483)
+.++.|+|++++++|+ +|+++ ..+++||||+|+ ++||| .++|+ ++||++++| +..|+|.++..
T Consensus 49 ~~~~~V~ri~~~~Ls~-EF~~~-~~~nkPVVIt~~-~~Wpa~~P~~kWt-------~dyL~~~~G~d~~V~V~D~~~--- 115 (451)
T 2yu1_A 49 YNANFVTFMEGKDFNV-EYIQR-GGLRDPLIFKNS-DGLGIKMPDPDFT-------VNDVKMCVGSRRMVDVMDVNT--- 115 (451)
T ss_dssp CBCCCCEECCGGGCSH-HHHHH-HCSCSCEEESSC-TTTTCBCCCTTCC-------HHHHHHHTCTTCCCCCEETTS---
T ss_pred CCCCceEecccccCCH-HHHHh-cCCCCcEEEccC-cCCCCcCCcCCCC-------HHHHHHHcCCCceEeeEEcCC---
Confidence 3457999999999999 99998 689999999999 99999 78998 599999999 59999998754
Q ss_pred cCcceeeecHHHHHHHHHhccccccccccccccCCCcceeee-eccccccCCccc-cccCCccccc-hhHHHhhhhcccC
Q 011537 81 TDQKRVEMSVSEFVKNWLENSIMENSNASTNEANDKSVLYLK-DWHFAKEYPEYV-AYRTPLIFCD-DWLNMYLDHFRLH 157 (483)
Q Consensus 81 ~~~~~~~m~l~efl~~~~~~~~~~~~~as~~~~~~~~~lYL~-d~~~~~~~P~l~-~y~~P~~f~d-Dwln~~~d~~~~~ 157 (483)
+...+|+|++|++|+.+.. .++.++|+. +++|... .+. .+..|.+..+ ||++.++......
T Consensus 116 --q~~~~M~l~eyidy~~~~~------------d~r~~LY~v~sLeF~~~--~l~~~~~~P~l~~d~Dwv~~~~p~~l~~ 179 (451)
T 2yu1_A 116 --QKGIEMTMAQWTRYYETPE------------EEREKLYNVISLEFSHT--RLENMVQRPSTVDFIDWVDNMWPRHLKE 179 (451)
T ss_dssp --SCCTTCCHHHHHHHHTSCT------------TTCCSCEEEEEECCTTS--TTGGGCBCCHHHHHHCHHHHHSCGGGCC
T ss_pred --CcceeeeHHHHHHHHhhcc------------ccccchhhhcccccccc--cccccccCchhhhhhhcccccCchhhhh
Confidence 3457999999999998743 134678873 3333211 111 2344554432 5677665331100
Q ss_pred CCCccccccCCccCCCc-cEEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccc-cCCCCCCccccccCCC
Q 011537 158 KDPESYQKDNDICCSDY-RFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLV-FDRNLKGCVYNIFDDV 235 (483)
Q Consensus 158 ~~pd~~~~~~~i~~~dy-r~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~L-y~~~~~s~~~di~d~~ 235 (483)
...+..+..++..+|++ ||+||||+||+|++|+|++++++|+++|+|+|+|+||||++.+.+ |.. +..+. ..
T Consensus 180 ~~~d~f~~lge~~rP~~~r~~~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~-~~~s~-----~q 253 (451)
T 2yu1_A 180 SQTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYEN-WLLSG-----SQ 253 (451)
T ss_dssp -----------CCSCCCCCEEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHH-HHHTT-----CC
T ss_pred hhhhhhhhcccccCCchheEEEEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCccccccccc-ccccc-----cc
Confidence 00111111122346888 999999999999999999999999999999999999999998643 321 10000 11
Q ss_pred CcccCCCCCCceeEEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCCChHHHHHHHHHH
Q 011537 236 SETDFPGFKKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRD 298 (483)
Q Consensus 236 d~~~fP~~~~a~~~e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~nl~~~~~~l~~~ 298 (483)
+...||.+ .+.+++|+|+|||+||||+||||+|.|+++||+|++||++.+|+..+|+++.-|
T Consensus 254 ~~~~~p~~-~~~~~~v~l~pGE~LfIPsGWwH~V~nledsIait~NF~~~~nl~~~l~~~~~E 315 (451)
T 2yu1_A 254 GDIFLGDR-VSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYNIE 315 (451)
T ss_dssp SSSCHHHH-SSCCEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEECCSSSHHHHHHHHHHH
T ss_pred hhhhhccc-cccceEEEECCCcEEEeCCCceEEEecCCCeEEEeeeeCCcccHHHHHHHHHHH
Confidence 12235543 256899999999999999999999999999999999999999999999988643
No 6
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=100.00 E-value=2.8e-42 Score=353.21 Aligned_cols=236 Identities=23% Similarity=0.404 Sum_probs=190.0
Q ss_pred CCceeeecCCCCCHHHHHHHHhCCCCcEEEEcCCCCccccccCcccCCCCchhHHHhhhCCceEEEEeCCcc--ccc--C
Q 011537 7 GGQIEKLNGKEVSYSEFVEKYMAKNQPVVLTGLMDDWRACKDWVTENGQPNLLFFSTHFGKSKVQVADCGIR--EFT--D 82 (483)
Q Consensus 7 ~~~IeRi~~~~lS~eeF~~~yl~~nkPVII~g~~~~WpA~~~Wt~~~~~~n~dyL~~~~Gd~~V~V~d~~~~--~f~--~ 82 (483)
..+|+|+++ +|+++|.++|+.+++||||+| +.+|||.++|+ ++||++++|+..|+|..+... .|. .
T Consensus 28 ~~~I~r~~~--lS~~eF~~~y~~~~kPvVi~g-~~~wpa~~~Ws-------~dyL~~~~g~~~V~v~~~~~~~~~~~~~~ 97 (338)
T 3al5_A 28 HLPVPRLEG--VSREQFMQHLYPQRKPLVLEG-IDLGPCTSKWT-------VDYLSQVGGKKEVKIHVAAVAQMDFISKN 97 (338)
T ss_dssp CCBCCEEES--CCHHHHHHHTGGGCCCEEEES-CCCCTHHHHCC-------HHHHHHHHCSCEEEEEC----CCCC-CCC
T ss_pred CCCCCEECC--CCHHHHHHHhhcCCCeEEEeC-CCCCcccccCC-------HHHHHHhhCCceEEEEEcCCCCccccccc
Confidence 468999995 999999999999999999999 88999999998 599999999999999876532 121 1
Q ss_pred cceeeecHHHHHHHHHhccccccccccccccCCCcceeeeecc---------ccccCCccc-cccCCccccchhHHHhhh
Q 011537 83 QKRVEMSVSEFVKNWLENSIMENSNASTNEANDKSVLYLKDWH---------FAKEYPEYV-AYRTPLIFCDDWLNMYLD 152 (483)
Q Consensus 83 ~~~~~m~l~efl~~~~~~~~~~~~~as~~~~~~~~~lYL~d~~---------~~~~~P~l~-~y~~P~~f~dDwln~~~d 152 (483)
...+.|+|++|++++........ .......+||+++. +..++|+|. +|.+|.+|..|.+.
T Consensus 98 ~~~~~~~f~efl~~~~~~~~~~~------l~~~~~~~Yl~~~~~~~~~~~~~l~~~~p~L~~d~~~P~~~~~d~~~---- 167 (338)
T 3al5_A 98 FVYRTLPFDQLVQRAAEEKHKEF------FVSEDEKYYLRSLGEDPRKDVADIRKQFPLLKGDIKFPEFFKEEQFF---- 167 (338)
T ss_dssp CCEEEEEHHHHHHHHHC-CCSSC------SSCTTCCCEEECCCSSTTTCCCCHHHHCHHHHTTCCCCCCSCGGGEE----
T ss_pred ceeEEeEHHHHHHHHHhcccccc------ccCCCcccchhhcccccccchhhHhHHCHHHHHhcCCCccccccccc----
Confidence 34579999999999875432110 01235679999763 556678775 68888887654321
Q ss_pred hcccCCCCccccccCCccCCCccEEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCcccccc
Q 011537 153 HFRLHKDPESYQKDNDICCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIF 232 (483)
Q Consensus 153 ~~~~~~~pd~~~~~~~i~~~dyr~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~ 232 (483)
..++|||++|++|++|+|+++|+ ++||.|+|+|+|+||.+...||+.+..++.+++
T Consensus 168 ---------------------~s~l~~g~~g~~~~~H~D~~~n~--~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~- 223 (338)
T 3al5_A 168 ---------------------SSVFRISSPGLQLWTHYDVMDNL--LIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNI- 223 (338)
T ss_dssp ---------------------EEEEEEECTTCEEEEECCSSEEE--EEECSSCEEEEEECGGGGGGGTEETTEESCCCS-
T ss_pred ---------------------cceeEECCCCCCccceECCcccE--EEEEEEEEEEEEECcccccccccCCCCcccccC-
Confidence 13799999999999999998765 999999999999999999999875433334554
Q ss_pred CCCCcccCCCCCCceeEEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCC
Q 011537 233 DDVSETDFPGFKKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGY 286 (483)
Q Consensus 233 d~~d~~~fP~~~~a~~~e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~ 286 (483)
+++|.++||.++.+++++|+|+|||+||||+||||+|.|+++|||||+||.+..
T Consensus 224 ~~~d~~~~p~~~~~~~~~~~L~pGD~LyiP~gWwH~v~~l~~sisvn~~~~~~~ 277 (338)
T 3al5_A 224 DNPDLAKYPLFSKARRYECSLEAGDVLFIPALWFHNVISEEFGVGVNIFWKHLP 277 (338)
T ss_dssp SSCCTTTCTTGGGCCEEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECSSC
T ss_pred CCcchhhCcccccCCCEEEEECCCCEEEECCCCeEEEeeCCCEEEEEEEecCCc
Confidence 467888999999999999999999999999999999999999999999998865
No 7
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=100.00 E-value=1.2e-40 Score=354.90 Aligned_cols=335 Identities=17% Similarity=0.243 Sum_probs=243.2
Q ss_pred CceeeecCCCCCHHHHHHHHhCCCCcEEEEcCC---CCccccccCcccCCCCchhHHHhhhC-CceEEEEeCCcccccCc
Q 011537 8 GQIEKLNGKEVSYSEFVEKYMAKNQPVVLTGLM---DDWRACKDWVTENGQPNLLFFSTHFG-KSKVQVADCGIREFTDQ 83 (483)
Q Consensus 8 ~~IeRi~~~~lS~eeF~~~yl~~nkPVII~g~~---~~WpA~~~Wt~~~~~~n~dyL~~~~G-d~~V~V~d~~~~~f~~~ 83 (483)
+-|.++++++++.+.|.+.. -++||||++.. ..||+ .+|+ ++|+++.+| +..|+|.++.+ +
T Consensus 136 ~~v~~~~~~~~~~~~~~~~~--~~~Pvli~~~~~lg~~~P~-~~~t-------~~~v~~~~G~d~~V~V~Dv~~-----Q 200 (488)
T 3kv5_D 136 EIIIKMHGSQLTQRYLEKHG--FDVPIMVPKLDDLGLRLPS-PTFS-------VMDVERYVGGDKVIDVIDVAR-----Q 200 (488)
T ss_dssp GTCEECCGGGCCHHHHHHHC--SCSCEEECSCTTTCCBCCC-TTCC-------HHHHHHHHCTTCEEEEEETTT-----T
T ss_pred heeeccccccchHHHHHhcC--CCCCEEEecCCCcCCcCCC-CCCc-------HHHHHHHhCCCceeeeeecCc-----c
Confidence 45888998899988776644 48999999753 58998 7898 599999999 89999999874 4
Q ss_pred ceeeecHHHHHHHHHhccccccccccccccCCCcceeeeeccccccCCccc-cccCCccccc-hhHHHhhhhcccCCCCc
Q 011537 84 KRVEMSVSEFVKNWLENSIMENSNASTNEANDKSVLYLKDWHFAKEYPEYV-AYRTPLIFCD-DWLNMYLDHFRLHKDPE 161 (483)
Q Consensus 84 ~~~~m~l~efl~~~~~~~~~~~~~as~~~~~~~~~lYL~d~~~~~~~P~l~-~y~~P~~f~d-Dwln~~~d~~~~~~~pd 161 (483)
...+|+|++|++|+++. .+..++|+.++++... .+. .|.+|.+|.+ ||++.+|.....
T Consensus 201 ~~~~m~l~~yi~y~~~~-------------~r~~~~nv~slefs~~--~L~~~~~~P~~~~~~d~~~~~wp~~~~----- 260 (488)
T 3kv5_D 201 ADSKMTLHNYVKYFMNP-------------NRPKVLNVISLEFSDT--KMSELVEVPDIAKKLSWVENYWPDDSV----- 260 (488)
T ss_dssp EEEEEEHHHHHHHHHSS-------------SCSSCEEEEEEECTTS--GGGGGCBCCHHHHHHCHHHHHCCTTCS-----
T ss_pred ccccccHHHHHHHHhcc-------------CCcccccccccccccc--hhhccCCCChhhhhhchhhhcCccccc-----
Confidence 56899999999999874 2467899999988742 344 6899999964 899988743111
Q ss_pred cccccCCccCCC-ccEEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcc-cccCCCCCCccccccCCCCccc
Q 011537 162 SYQKDNDICCSD-YRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCH-LVFDRNLKGCVYNIFDDVSETD 239 (483)
Q Consensus 162 ~~~~~~~i~~~d-yr~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~-~Ly~~~~~s~~~di~d~~d~~~ 239 (483)
..+|. .||+|||++||+|++|+|+++|++|+++|+|+|+|+|+||++.+ .+|.. ++. ...+.+.
T Consensus 261 -------~~rP~~~r~~~mG~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~------~~~-~~~~~~~ 326 (488)
T 3kv5_D 261 -------FPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYES------WSS-SVTQSEV 326 (488)
T ss_dssp -------SCCCCCSCEEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHH------HHT-CSSGGGS
T ss_pred -------ccCcccceEEEEcCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccc------ccc-CCccchh
Confidence 11233 48999999999999999999999999999999999999998875 34431 110 1123345
Q ss_pred CCCCCCceeEEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 011537 240 FPGFKKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRDYNEAKEYIEDIRDICDDFEGL 319 (483)
Q Consensus 240 fP~~~~a~~~e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~nl~~~~~~l~~~l~~~~~~~~d~~~~~~~f~~~ 319 (483)
|+....+++++|+|+|||+||||+||||+|.|+++||+||+||++..|++.+|+..+-
T Consensus 327 ~~~~~~~~~~~~~l~pGe~lfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~---------------------- 384 (488)
T 3kv5_D 327 FFGDKVDKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEM---------------------- 384 (488)
T ss_dssp CGGGSSSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHH----------------------
T ss_pred hhcccccceEEEeeCCCCEEEeCCCceEEeeCCCCeEEEccccCCccCHHHHHHHHHH----------------------
Confidence 6666667899999999999999999999999999999999999999999999875431
Q ss_pred HHHhhhhccCCCHHHHHHHHHHHhhhhHHHHHhhccccccccCCCCccccchhccHHHHHHHHHHhccccccccccchhh
Q 011537 320 CQRNLAANTGMNFYDFFSFLSRFSLVNVVILFHLRRDYENQIWSSSPVARHLALNLVSIQKIALKMKSVNDLAGSFGFFM 399 (483)
Q Consensus 320 cq~~~~~~~g~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (483)
+.+++...+..|-.|..++-+.|...+..|-........ -+.+++==+..|...|..-+.-+.....++
T Consensus 385 -e~~~~~~~~~~~p~f~~~~w~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~--- 453 (488)
T 3kv5_D 385 -EKRLKTPDLFKFPFFEAICWFVAKNLLETLKELREDGFQ-------PQTYLVQGVKALHTALKLWMKKELVSEHAF--- 453 (488)
T ss_dssp -HHHTTCCTTSSCTTHHHHHHHHHHHHHHHHHHHHSSSCC-------CCHHHHHHHHHHHHHHHHTSSCCC---CGG---
T ss_pred -HHhcCCcccccCccHHHHHHHHHHHHHHHHHHHHhcccC-------CcHHHHHHHHHHHHHHHHHHhCcccccccc---
Confidence 125667888889999999888888777766443221111 123333334455555555555443333322
Q ss_pred hhHHhcCChhHHHHHhhhhHHHhhhhhh
Q 011537 400 YLKETLDDPEFLKLCMGFCRTYGMIHEE 427 (483)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (483)
.+-+++. =.+|..+|+|--..+.+.
T Consensus 454 ~~p~~~~---~~~~~~~~~~~~~~~~~~ 478 (488)
T 3kv5_D 454 EIPDNVR---PGHLIKELSKVIRAIEEE 478 (488)
T ss_dssp GCCSSSC---TTHHHHHHHHHHHHHHHH
T ss_pred cCCCcCC---HHHHHHHHHHHHHHHHhh
Confidence 2223332 235556666655555443
No 8
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=100.00 E-value=8.5e-41 Score=344.75 Aligned_cols=242 Identities=18% Similarity=0.325 Sum_probs=194.4
Q ss_pred CceeeecCCCCCHHHHHHHHhCCCCcEEEEcCC---CCccccccCcccCCCCchhHHHhhhC-CceEEEEeCCcccccCc
Q 011537 8 GQIEKLNGKEVSYSEFVEKYMAKNQPVVLTGLM---DDWRACKDWVTENGQPNLLFFSTHFG-KSKVQVADCGIREFTDQ 83 (483)
Q Consensus 8 ~~IeRi~~~~lS~eeF~~~yl~~nkPVII~g~~---~~WpA~~~Wt~~~~~~n~dyL~~~~G-d~~V~V~d~~~~~f~~~ 83 (483)
+-|.|+++++++.+-|.+.. -++|+||++.. ..||+ .+|+ ++|+++.+| +..|+|.++.+ +
T Consensus 44 ~~v~~~~g~~f~~~yl~~~g--~~~Pvli~~~~glgm~~P~-~~~t-------v~~v~~~vG~d~~V~ViDv~~-----Q 108 (392)
T 3pua_A 44 DVVARVPGSQLTLGYMEEHG--FTEPILVPKKDGLGLAVPA-PTFY-------VSDVENYVGPERSVDVTDVTK-----Q 108 (392)
T ss_dssp GTSEECCGGGCCHHHHHHHT--TCSCEEESSCTTTTCBCCC-TTCC-------HHHHHHHHCTTCEEEEEETTT-----T
T ss_pred HeEecCChhhchHHHHHhcC--CCccEEEeCCccccCcCCC-CCCC-------HHHHHHHcCCCcEEeeeecCc-----C
Confidence 45789999888888666644 38999999644 68998 6898 599999999 89999999874 5
Q ss_pred ceeeecHHHHHHHHHhccccccccccccccCCCcceeeeeccccccCCccc-cccCCccccc-hhHHHhhhhcccCCCCc
Q 011537 84 KRVEMSVSEFVKNWLENSIMENSNASTNEANDKSVLYLKDWHFAKEYPEYV-AYRTPLIFCD-DWLNMYLDHFRLHKDPE 161 (483)
Q Consensus 84 ~~~~m~l~efl~~~~~~~~~~~~~as~~~~~~~~~lYL~d~~~~~~~P~l~-~y~~P~~f~d-Dwln~~~d~~~~~~~pd 161 (483)
...+|+|++|++|+++. .+..++|+.++.+... .+. .+.+|.++.+ ||++.++.....
T Consensus 109 ~~~~M~l~~yv~Y~~~~-------------~re~~lnv~dlefs~t--~L~~~~~~P~lv~d~d~v~~~wp~~~~----- 168 (392)
T 3pua_A 109 KDCKMKLKEFVDYYYST-------------NRKRVLNVTNLEFSDT--RMSSFVEPPDIVKKLSWVENYWPDDAL----- 168 (392)
T ss_dssp EEEEEEHHHHHHHHTCS-------------SCCSCEEEEEEECTTS--GGGGGCBCCHHHHHHCHHHHHSCTTCS-----
T ss_pred cCccccHHHHHHHHhcc-------------CCCcceEeeecccccc--hhhccccCchhhhhhhhhhhccchhhh-----
Confidence 67899999999999864 3578999999988743 343 5789998886 899887743211
Q ss_pred cccccCCccCCC-ccEEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCccc-ccCCCCCCccccccCCCCccc
Q 011537 162 SYQKDNDICCSD-YRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHL-VFDRNLKGCVYNIFDDVSETD 239 (483)
Q Consensus 162 ~~~~~~~i~~~d-yr~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~-Ly~~~~~s~~~di~d~~d~~~ 239 (483)
..+|+ +||+|||++||+|++|+|++++++|+++++|+|+|+|+||++.+. +|... . ....+.+.
T Consensus 169 -------~~rP~v~r~~~mGp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~------~-~s~~~~e~ 234 (392)
T 3pua_A 169 -------LAKPKVTKYCLICVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERW------R-SASNHSEM 234 (392)
T ss_dssp -------SCCCSCSCEEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHH------H-HSTTGGGS
T ss_pred -------hcCCCceeEEEEeCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhc------c-cCcchhhh
Confidence 12354 899999999999999999999999999999999999999998753 23210 0 01112233
Q ss_pred CCCCCCceeEEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCCChHHHHHHHHHH
Q 011537 240 FPGFKKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRD 298 (483)
Q Consensus 240 fP~~~~a~~~e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~nl~~~~~~l~~~ 298 (483)
|+....+.+++|+|+|||+||||+||||+|.|+++||+|++||++++|++.+|+.++-|
T Consensus 235 ~~~~~~~~~~ev~l~pGEtlfIPsGWwH~V~nledSIai~gNFl~~~nl~~~l~~~~~E 293 (392)
T 3pua_A 235 FFADQVDKCYKCIVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVE 293 (392)
T ss_dssp CGGGGSSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCTTCHHHHHHHHHHH
T ss_pred hhcccccceEEEEECCCcEEeeCCCceEEEecCCCEEEEcCcccChhhHHHHHHHHHHH
Confidence 44334568899999999999999999999999999999999999999999999977643
No 9
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=340.55 Aligned_cols=333 Identities=17% Similarity=0.277 Sum_probs=231.9
Q ss_pred eeeecCCCCCHHHHHHHHhCCCCcEEEEc---CCCCccccccCcccCCCCchhHHHhhhC-CceEEEEeCCcccccCcce
Q 011537 10 IEKLNGKEVSYSEFVEKYMAKNQPVVLTG---LMDDWRACKDWVTENGQPNLLFFSTHFG-KSKVQVADCGIREFTDQKR 85 (483)
Q Consensus 10 IeRi~~~~lS~eeF~~~yl~~nkPVII~g---~~~~WpA~~~Wt~~~~~~n~dyL~~~~G-d~~V~V~d~~~~~f~~~~~ 85 (483)
|.++++++++.+-|.+..+ ++|+||++ +...||+. +|+ ++|+++.+| +..|+|.++.+ +..
T Consensus 103 ~~~~~g~~~~~~~~~~~~~--~~Pvli~~~~glgm~~P~~-~~t-------v~~v~~~~G~d~~V~ViDv~~-----Q~~ 167 (447)
T 3kv4_A 103 ILKPTGNQLTVEFLEENSF--SVPILVLKKDGLGMTLPSP-SFT-------VRDVEHYVGSDKEIDVIDVTR-----QAD 167 (447)
T ss_dssp CBCCCTTTCCHHHHHHTTS--CSCEEESSCTTSCCBCCCT-TCC-------HHHHHHHHCTTCEEEEEETTT-----TEE
T ss_pred eeccchhhchHHHHHhcCC--CCCEEEecCcccCCcCCCc-cCC-------HHHHHHHcCCCceEcceecCc-----Ccc
Confidence 5577887888766665443 89999995 44689977 898 599999999 89999999863 567
Q ss_pred eeecHHHHHHHHHhccccccccccccccCCCcceeeeeccccccCCccc-cccCCccccc-hhHHHhhhhcccCCCCccc
Q 011537 86 VEMSVSEFVKNWLENSIMENSNASTNEANDKSVLYLKDWHFAKEYPEYV-AYRTPLIFCD-DWLNMYLDHFRLHKDPESY 163 (483)
Q Consensus 86 ~~m~l~efl~~~~~~~~~~~~~as~~~~~~~~~lYL~d~~~~~~~P~l~-~y~~P~~f~d-Dwln~~~d~~~~~~~pd~~ 163 (483)
.+|+|++|++|+++. .+..++|+.++++... .+. +|.+|.+|.+ ||++.+|.....
T Consensus 168 ~~M~l~~y~dy~~~~-------------~r~~~lnv~d~efs~~--~L~~~~~~P~~~~~~D~~~~lw~~~~~------- 225 (447)
T 3kv4_A 168 CKMKLGDFVKYYYSG-------------KREKVLNVISLEFSDT--RLSNLVETPKIVRKLSWVENLWPEECV------- 225 (447)
T ss_dssp EEEEHHHHHHHHHSS-------------CCSSCEEEEEEECTTS--GGGGGCBCCHHHHHHCHHHHHCCSCTT-------
T ss_pred ccccHHHHHHHHhcc-------------CCCCceeecccccccc--hhhhccCCCceecccchhhhcccchhh-------
Confidence 899999999999863 2467999999998753 454 6999999985 899988743111
Q ss_pred cccCCccCCC-ccEEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCccc-ccCCCCCCccccccCCCCcccCC
Q 011537 164 QKDNDICCSD-YRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHL-VFDRNLKGCVYNIFDDVSETDFP 241 (483)
Q Consensus 164 ~~~~~i~~~d-yr~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~-Ly~~~~~s~~~di~d~~d~~~fP 241 (483)
..+|+ +||+|||++||+|++|+|+++|++|+++|+|+|+|+|+||++.+. +|.. + . ....+.+.|+
T Consensus 226 -----~~rP~v~r~~~mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~-~-----~-~s~~~~~~~~ 293 (447)
T 3kv4_A 226 -----FERPNVQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFEC-W-----S-SSSNQNEMFF 293 (447)
T ss_dssp -----SCCCCCSCEEEEECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHH-H-----H-TCSSGGGSCG
T ss_pred -----ccCCCceeEEEEeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhh-c-----c-cCcchhhhhc
Confidence 12344 899999999999999999999999999999999999999998753 2221 0 0 0111233444
Q ss_pred CCCCceeEEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 011537 242 GFKKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRDYNEAKEYIEDIRDICDDFEGLCQ 321 (483)
Q Consensus 242 ~~~~a~~~e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~nl~~~~~~l~~~l~~~~~~~~d~~~~~~~f~~~cq 321 (483)
....+++++|+|+|||+||||+||||+|.|+++||+|++||++.+|++.+|+.++-|.+. ...+ +-..+.|+.+|
T Consensus 294 ~~~~~~~~~v~l~pGetlfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~E~~~---~~~~-~~~~p~f~~~~- 368 (447)
T 3kv4_A 294 GDQVDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRL---STAD-LFRFPNFETIC- 368 (447)
T ss_dssp GGGSSCCEEEEEETTCEEEECTTCEEEEEESSCEEEEEEEECCSTTHHHHHHHHHHHHHT---TCCG-GGSCTTHHHHH-
T ss_pred cccccceEEEEECCCcEEecCCCCeEEEecCCCEEEEccccccccCHHHHHHHHHHHHhc---CCCc-cccccCHHHHH-
Confidence 445678999999999999999999999999999999999999999999999977533210 0000 00123343333
Q ss_pred HhhhhccCCCHHHHHHHHHHHhhhhHHHHHhhccccccccCCCCccccchhccHHHHHHHHHHhccccccccccchhhhh
Q 011537 322 RNLAANTGMNFYDFFSFLSRFSLVNVVILFHLRRDYENQIWSSSPVARHLALNLVSIQKIALKMKSVNDLAGSFGFFMYL 401 (483)
Q Consensus 322 ~~~~~~~g~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (483)
=..|. +++.-++..+..+. .-+.+++=.+..|...|..-++.+++.+-.+
T Consensus 369 ------------------w~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~----- 418 (447)
T 3kv4_A 369 ------------------WYVGK-HILDIFRGLRENRR------HPASYLVHGGKALNLAFRAWTRKEALPDHED----- 418 (447)
T ss_dssp ------------------HHHHH-HHHHHHHHHHHTTC------CCCHHHHHHHHHHHHHHHHHTSTTTGGGTGG-----
T ss_pred ------------------HHHHH-HHHHHHHHHHhcCC------CCcHHHHHHHHHHHHHHHHHHhhhccccccc-----
Confidence 22222 22221111121111 1234555566667777777677776655332
Q ss_pred HHhcCChhHHHHHhhhhHHHhhhhhh
Q 011537 402 KETLDDPEFLKLCMGFCRTYGMIHEE 427 (483)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (483)
+|=|.=+=.+|..+|+|....+.+.
T Consensus 419 -~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (447)
T 3kv4_A 419 -EIPETVRTVQLIKDLAREIRLVEDI 443 (447)
T ss_dssp -GSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred -ccccccCHHHHHHHHHHHHHHHHhh
Confidence 2223333456777777777666543
No 10
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=100.00 E-value=7.4e-40 Score=336.69 Aligned_cols=237 Identities=21% Similarity=0.357 Sum_probs=178.4
Q ss_pred CCceeeecCCCCCHHHHHHHHhCCCCcEEEEcCCCCccccccCcccCCCCchhHHHhhhCCceEEEEeCCcc--c-----
Q 011537 7 GGQIEKLNGKEVSYSEFVEKYMAKNQPVVLTGLMDDWRACKDWVTENGQPNLLFFSTHFGKSKVQVADCGIR--E----- 79 (483)
Q Consensus 7 ~~~IeRi~~~~lS~eeF~~~yl~~nkPVII~g~~~~WpA~~~Wt~~~~~~n~dyL~~~~Gd~~V~V~d~~~~--~----- 79 (483)
..+|+|+++ +|++ | ++|+.+++||||+|++.+||| ++|+ ++||++++|+..|+|..+... .
T Consensus 39 ~~~I~Rv~~--~s~~-~-~~y~~~~~PVVi~g~~~~wpA-~kWt-------~eyL~~~~G~~~V~V~~~~~~~~~y~d~~ 106 (349)
T 3d8c_A 39 TRPIPRLSQ--SDPR-A-EELIENEEPVVLTDTNLVYPA-LKWD-------LEYLQENIGNGDFSVYSASTHKFLYYDEK 106 (349)
T ss_dssp EEECCEECT--TCHH-H-HHHHHTTCCEEESCCCTTGGG-GGCC-------HHHHHHHSCSSCEEEEEESSSBCCCCCGG
T ss_pred CCCceEecC--CChh-H-HHHhcCCccEEEeCCCCCccc-ccCC-------HHHHHHhhCCCeEEEEECCCCcccccccc
Confidence 458999996 6776 5 679999999999999999999 9998 599999999999999865421 1
Q ss_pred -------ccCc-ceeeecHHHHHHHHHhccccccccccccccCCCcceeeeeccccccCCccc-cccCCccccchhHHHh
Q 011537 80 -------FTDQ-KRVEMSVSEFVKNWLENSIMENSNASTNEANDKSVLYLKDWHFAKEYPEYV-AYRTPLIFCDDWLNMY 150 (483)
Q Consensus 80 -------f~~~-~~~~m~l~efl~~~~~~~~~~~~~as~~~~~~~~~lYL~d~~~~~~~P~l~-~y~~P~~f~dDwln~~ 150 (483)
|... .+.+|+|++|++++...... .+..++||+++......|++. +|.. |..||++.+
T Consensus 107 ~~~~~~~F~~~~~~~~m~~~efl~~~~~~~~~----------~~~~~~YL~~~~~~~~~~~l~~D~~~---~~~~~~~~~ 173 (349)
T 3d8c_A 107 KMANFQNFKPRSNREEMKFHEFVEKLQDIQQR----------GGEERLYLQQTLNDTVGRKIVMDFLG---FNWNWINKQ 173 (349)
T ss_dssp GTTSCTTCCCSEEEEEECHHHHHHHHHHHHHH----------TCCCEEEEEEECCTTSCHHHHHHHHT---SCHHHHHHH
T ss_pred cccccccccccceeEeeEHHHHHHHHHhhccc----------CCCCCeeeecccccccchhhhhhhhc---cchhhhhhh
Confidence 2111 35799999999999874321 235689999875433233332 2321 223566544
Q ss_pred hhhcccCCCCccccccCCccCCCc-cEEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCC-----
Q 011537 151 LDHFRLHKDPESYQKDNDICCSDY-RFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNL----- 224 (483)
Q Consensus 151 ~d~~~~~~~pd~~~~~~~i~~~dy-r~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~----- 224 (483)
...... .+.+ .++|||++||+|++|+|+++ +|++||.|+|+|+|+||.+...||+...
T Consensus 174 ~~~~~~--------------~~~~~~~l~iG~~gs~t~~H~D~~~--n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~ 237 (349)
T 3d8c_A 174 QGKRGW--------------GQLTSNLLLIGMEGNVTPAHYGEQQ--NFFAQIKGYKRCILFPPDQFECLYPYPVHHPCD 237 (349)
T ss_dssp HHHTTC--------------CCEEECEEEEECTTCEEEEECCSEE--EEEEEEESCEEEEEECGGGHHHHCBBCTTSTTB
T ss_pred hhcccc--------------CccccceEEEECCCCCccceECChh--cEEEEEeceEEEEEeCcchhhhhccccccCCCC
Confidence 322110 0122 46999999999999999985 5599999999999999999988887532
Q ss_pred CCccccccCCCCcccCCCCCCceeEEEEEeCCcEEEeCCCCeEEEEeCC---CcEEEeeecCCC
Q 011537 225 KGCVYNIFDDVSETDFPGFKKTLWLECTQEQNEIIFVPSGWYHQVHNLE---DTISINHNWFNG 285 (483)
Q Consensus 225 ~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pGDiLFVPsGWwHqV~nle---dsISIn~Nf~~~ 285 (483)
..+.+|+ +.+|.++||.++.+++++|+|+|||+||||+||||+|.|++ .|||||++|-..
T Consensus 238 ~~s~vd~-~~~d~~~~p~~~~~~~~~~~l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w~~~~ 300 (349)
T 3d8c_A 238 RQSQVDF-DNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWYKGA 300 (349)
T ss_dssp TBBCSCT-TSCCTTTCGGGGGCCEEEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEEEEECC
T ss_pred CcccccC-CCcchhhCcccccCCcEEEEECCCCEEEECCCCcEEEEEcCCCCcEEEEEEEcCCC
Confidence 1233443 45788999999999999999999999999999999999998 378888877554
No 11
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=99.97 E-value=1.4e-30 Score=275.49 Aligned_cols=246 Identities=16% Similarity=0.198 Sum_probs=177.7
Q ss_pred CHHHHHHHHhCCC------CcEEEEc---CCCCccccccCcccCCCCchhHHHhhhC-CceEEEEeCCcccccCcceeee
Q 011537 19 SYSEFVEKYMAKN------QPVVLTG---LMDDWRACKDWVTENGQPNLLFFSTHFG-KSKVQVADCGIREFTDQKRVEM 88 (483)
Q Consensus 19 S~eeF~~~yl~~n------kPVII~g---~~~~WpA~~~Wt~~~~~~n~dyL~~~~G-d~~V~V~d~~~~~f~~~~~~~m 88 (483)
+-.+|..+|...+ +|+++++ +.-.-|. ... +++.+.+-.| +..|.|.|+.+ +....|
T Consensus 152 dG~~f~~~~~~~~g~~~f~~p~lv~~~dgLgm~~P~-~~f-------tv~dV~~~vG~d~~VdVIDV~t-----Q~~~~m 218 (528)
T 3pur_A 152 DGYEFRREFEKLGGADNWGKVFMVKDMDGLNMTMPK-PGF-------DLEDVVKIMGSDYEVDTIDVYN-----QSTYSM 218 (528)
T ss_dssp EHHHHHHHHHHTTCGGGCCSEEEEEECTTSCCCCCC-TTC-------CHHHHHHHHCTTCEEEEEETTT-----TEEEEE
T ss_pred CchhhHHHHHhhcCcccCCeeEEEeccccCCCCCCC-CCC-------CHHHHHHhhCCCceEeeEECCC-----CCCCcC
Confidence 4567777776533 6999984 3333331 122 3578888888 68999999864 556789
Q ss_pred cHHHHHHHHHhccccccccccccccCCCcceeeeeccccccCCccc-cccCCccccc-hhHHHhhhhcccCCCCccccc-
Q 011537 89 SVSEFVKNWLENSIMENSNASTNEANDKSVLYLKDWHFAKEYPEYV-AYRTPLIFCD-DWLNMYLDHFRLHKDPESYQK- 165 (483)
Q Consensus 89 ~l~efl~~~~~~~~~~~~~as~~~~~~~~~lYL~d~~~~~~~P~l~-~y~~P~~f~d-Dwln~~~d~~~~~~~pd~~~~- 165 (483)
+|++|++|+.+.. .....+++.++.+.. .|.+. .+.+|.++++ ||++.+|+........+..+.
T Consensus 219 tl~~~~~yf~~~~------------~R~~i~NviSLEfS~-~~~L~~~v~~P~~Vr~ld~v~~~Wp~~~~~~~~~~~~~~ 285 (528)
T 3pur_A 219 KLDTFRKLFRDTK------------NRPLLYNFLSLEFSD-NNEMKEIAKPPRFVQEISMVNRLWPDVSGAEYIKLLQRE 285 (528)
T ss_dssp EHHHHHHHHHCCS------------CCSSCEEECCEECTT-STTHHHHSCCCHHHHHHCHHHHHSCCC------------
T ss_pred cHHHHHHHhcCcc------------ccceeeEEeeEEecC-chhhhccccCCcEEecccHHHHhcCcccchhhhhhhhcc
Confidence 9999999998631 135678898998873 56665 4788999988 999999864321000000000
Q ss_pred --cCCccCCCc-cEEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCccc-ccCCCCCCccccccCCCCcccCC
Q 011537 166 --DNDICCSDY-RFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHL-VFDRNLKGCVYNIFDDVSETDFP 241 (483)
Q Consensus 166 --~~~i~~~dy-r~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~-Ly~~~~~s~~~di~d~~d~~~fP 241 (483)
..+..+|++ ||++||++||+|.+|+|++++.+|++++.|+|+|+|+||++.+. +|.. +..+. .....|+
T Consensus 286 ~~~~~~~rP~v~rf~lmg~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~-w~~s~------~~~~wfg 358 (528)
T 3pur_A 286 EYLPEDQRPKVEQFCLAGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQA-HETSP------DTTTWFG 358 (528)
T ss_dssp -CCCGGGSCCCSSEEEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHH-HHHSS------CCSCCGG
T ss_pred cccccccCCCeeEEEEEeCCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhh-hccCC------chhhhhc
Confidence 001235676 99999999999999999999999999999999999999987653 3321 10000 0122233
Q ss_pred CCCCceeEEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCCChHHHHHHHHH
Q 011537 242 GFKKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLR 297 (483)
Q Consensus 242 ~~~~a~~~e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~nl~~~~~~l~~ 297 (483)
......+++|+|+|||+||||+||||+|.|+++||+|++||++.+|++.+|+..+-
T Consensus 359 d~l~~~~~~v~l~pGEtlfIPsGW~HaV~tleDSIaiggNFl~~~nl~~qlri~~i 414 (528)
T 3pur_A 359 DIANGAVKRVVIKEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHLGNLEMQMRVYHL 414 (528)
T ss_dssp GGTTTCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCGGGHHHHHHHHHH
T ss_pred ccccccEEEEEECCCCEEEecCCceEEEecCCCeEEEcCcccchhhHHHHHHHHHH
Confidence 32234678999999999999999999999999999999999999999999986653
No 12
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=99.92 E-value=5.9e-25 Score=225.28 Aligned_cols=211 Identities=16% Similarity=0.136 Sum_probs=133.2
Q ss_pred CCCHHHHHHHHhCCCCcEEEEcCCCCc-cccccCcccCCCCchhHHHhhhCC-----ceEEEEeCC--cccccCccee-e
Q 011537 17 EVSYSEFVEKYMAKNQPVVLTGLMDDW-RACKDWVTENGQPNLLFFSTHFGK-----SKVQVADCG--IREFTDQKRV-E 87 (483)
Q Consensus 17 ~lS~eeF~~~yl~~nkPVII~g~~~~W-pA~~~Wt~~~~~~n~dyL~~~~Gd-----~~V~V~d~~--~~~f~~~~~~-~ 87 (483)
.+|.++|.++|. .++||||+++ .+| ++ .|+. ++|.+.++. ..|.+.... ...|.. +.. .
T Consensus 27 ~is~e~F~~~yw-~kkPlvir~~-~~~~~~--l~s~-------~~L~~l~~~~~v~~~~vrl~~~~~~~~~~~~-~~g~~ 94 (342)
T 1vrb_A 27 PVTMSEFLEEYW-PVKPLVARGE-VERFTS--IPGF-------EKVRTLENVLAIYNNPVMVVGDAVIEESEGI-TDRFL 94 (342)
T ss_dssp TSCHHHHHHHTT-TTSCEEECCC-GGGGGG--STTC-------GGGSSHHHHHHHCCSCEEEC--------------CEE
T ss_pred CCCHHHHHHHHh-ccCCEEEcCC-cccccC--CCCH-------HHHHHHHhhcCcCcCceEEeCCCcCcccccc-CCCcc
Confidence 599999999999 7899999998 665 43 5553 444443332 334443111 112321 122 6
Q ss_pred ecHHHHHHHHHhccccccccccccccCCCcceeeeeccccccCCccccccCCccccchhHHHhhhhcccCCCCccccccC
Q 011537 88 MSVSEFVKNWLENSIMENSNASTNEANDKSVLYLKDWHFAKEYPEYVAYRTPLIFCDDWLNMYLDHFRLHKDPESYQKDN 167 (483)
Q Consensus 88 m~l~efl~~~~~~~~~~~~~as~~~~~~~~~lYL~d~~~~~~~P~l~~y~~P~~f~dDwln~~~d~~~~~~~pd~~~~~~ 167 (483)
++.++|.+.... +..+++..- ....|++.. +++.+... + +..
T Consensus 95 ~~~~~~~~l~~~----------------g~tl~v~~~--~~~~p~l~~----------l~~~~~~~-~-----~~~---- 136 (342)
T 1vrb_A 95 VSPAEALEWYEK----------------GAALEFDFT--DLFIPQVRR----------WIEKLKAE-L-----RLP---- 136 (342)
T ss_dssp ECHHHHHHHHHT----------------TCCEEECCG--GGTCTHHHH----------HHHHHHHH-T-----TCC----
T ss_pred cCHHHHHHHHhC----------------CCeEEECCh--hHhChHHHH----------HHHhhhhh-c-----CCc----
Confidence 788888765432 234555542 222343321 11111100 0 000
Q ss_pred CccCCCccEEEecCCCCCCCcccccCCCccceeEEEeEEEEEEe-CCCCcccccCCCCCC---ccccccCCCCcccCCCC
Q 011537 168 DICCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFL-SPSQCHLVFDRNLKG---CVYNIFDDVSETDFPGF 243 (483)
Q Consensus 168 ~i~~~dyr~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~Lf-PP~~~~~Ly~~~~~s---~~~di~d~~d~~~fP~~ 243 (483)
+.......+|+||+|++|++|+|+++++ .+||.|+|+|+|+ ||.....+|+....+ +..++ +.++.++||.+
T Consensus 137 -~~~n~~~~~~~gp~g~~~~~H~D~~dnf--l~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~p~~ 212 (342)
T 1vrb_A 137 -AGTSSKAIVYAAKNGGGFKAHFDAYTNL--IFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDL-QSYWKGDPPKE 212 (342)
T ss_dssp -TTCCEEEEEEEECSSCCCCSEECSSEEE--EEEEESCEEEEEECCSSCSSCSSCEECC----CCHHH-HHHCCSCCCCT
T ss_pred -ccccccceEEEeCCCCCCCCeECChhcE--EEEEEEEEEEEEecCCccccccCcccccccccccccc-cccchhhcccc
Confidence 0001123589999999999999999988 9999999999999 888776676522111 11221 12345679988
Q ss_pred CCceeEEEEEeCCcEEEeCCCCeEEEEeCC--CcEEEeee
Q 011537 244 KKTLWLECTQEQNEIIFVPSGWYHQVHNLE--DTISINHN 281 (483)
Q Consensus 244 ~~a~~~e~vq~pGDiLFVPsGWwHqV~nle--dsISIn~N 281 (483)
+.++.++|+|+|||+||||+||||+|.+++ +|++|+++
T Consensus 213 ~~~~~~~~~L~pGD~LyiP~gwwH~v~s~~~~~slsvsi~ 252 (342)
T 1vrb_A 213 DLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG 252 (342)
T ss_dssp TCCSSEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEEC
T ss_pred ccCCceEEEECCCcEEEeCCCccEEEEECCCCceEEEEEC
Confidence 888899999999999999999999999994 58888887
No 13
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=99.79 E-value=1.4e-19 Score=191.04 Aligned_cols=92 Identities=18% Similarity=0.270 Sum_probs=70.2
Q ss_pred ccEEEecCCCCCC-CcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEE
Q 011537 174 YRFVYMGAKGSWT-PLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECT 252 (483)
Q Consensus 174 yr~l~iGp~gs~T-~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~v 252 (483)
..++|+|++|+.+ ++|+|.++++ .+||.|+|+|+|+||.+. + +. .+..+. ++ . + ..+.++++
T Consensus 140 ~~n~y~~~~g~~g~~~H~D~~dvf--~~Qv~G~Krw~l~~p~~p--l-~~---~~s~d~---~~--~---~-~~~~~~~~ 202 (442)
T 2xdv_A 140 GSNVYITPAGSQGLPPHYDDVEVF--ILQLEGEKHWRLYHPTVP--L-AR---EYSVEA---EE--R---I-GRPVHEFM 202 (442)
T ss_dssp EEEEEEECTTCBCSCSEECSSEEE--EEEEESCEEEEEECCSST--T-CS---SCEECC---TT--T---S-CSCSEEEE
T ss_pred ccceEECCCCCCCccceECCcceE--EEEEEeEEEEEEccCCCC--c-cc---cCCCCc---hh--h---c-CCcceEEE
Confidence 3579999999876 9999999998 999999999999999862 1 21 111221 11 1 2 24578999
Q ss_pred EeCCcEEEeCCCCeEEEEeCC-C--cEEEeeec
Q 011537 253 QEQNEIIFVPSGWYHQVHNLE-D--TISINHNW 282 (483)
Q Consensus 253 q~pGDiLFVPsGWwHqV~nle-d--sISIn~Nf 282 (483)
++|||+||||+||||+|.+++ . |+.+++.-
T Consensus 203 L~pGD~LYiP~g~~H~~~s~~~~~~SlhlT~~~ 235 (442)
T 2xdv_A 203 LKPGDLLYFPRGTIHQADTPAGLAHSTHVTIST 235 (442)
T ss_dssp ECTTCEEEECTTCEEEEECCSSSCCEEEEEEEE
T ss_pred ECCCcEEEECCCceEEEEecCCCcceeeccccc
Confidence 999999999999999999986 2 55555553
No 14
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=99.71 E-value=2.8e-16 Score=166.20 Aligned_cols=106 Identities=14% Similarity=0.251 Sum_probs=78.8
Q ss_pred cEEEecCCCCCC-CcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEE
Q 011537 175 RFVYMGAKGSWT-PLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQ 253 (483)
Q Consensus 175 r~l~iGp~gs~T-~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq 253 (483)
.++|++|+|+.+ +.|+|.++++ .+||.|+|+|+|++|.....+++.. .+..++ ..+ ...+.+++++
T Consensus 166 ~N~Y~tp~Gs~g~~pH~D~~DvF--llQv~G~KrWrL~~P~~~~~~lp~~-~~~~~~---~~~-------~~~p~~e~~L 232 (489)
T 4diq_A 166 SNVYLTPPNSQGFAPHYDDIEAF--VLQLEGRKLWRVYRPRAPTEELALT-SSPNFS---QDD-------LGEPVLQTVL 232 (489)
T ss_dssp EEEEEECSSBCCSCCBCCSSEEE--EEEEEECEEEEEECCSSGGGTTCSS-CCCCCC---GGG-------CCCCSEEEEE
T ss_pred ceEEecCCCcccccCccCCcceE--EEEEeeEEEEEEeCCCCccccCCCc-ccccCC---ccc-------ccCcceEEEE
Confidence 478999999864 9999999999 9999999999999999876544432 111111 001 1246789999
Q ss_pred eCCcEEEeCCCCeEEEEeCCC--cEEEeeecCCCCChHHHHH
Q 011537 254 EQNEIIFVPSGWYHQVHNLED--TISINHNWFNGYNLSWVWD 293 (483)
Q Consensus 254 ~pGDiLFVPsGWwHqV~nled--sISIn~Nf~~~~nl~~~~~ 293 (483)
+|||+||||+||||+|.++++ |+++++..........++.
T Consensus 233 ~pGDvLYiP~g~~H~~~s~~~~~SlhlTi~~~~~~tw~dll~ 274 (489)
T 4diq_A 233 EPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQRNTWGDFLE 274 (489)
T ss_dssp CTTCEEEECTTCEEEEEBCSSCCEEEEEEEECTTCBHHHHHH
T ss_pred CCCCEEEECCCCceEEEecCCCceEEEeecccCcccHHHHHH
Confidence 999999999999999999975 7777776654433433333
No 15
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=99.68 E-value=1.8e-17 Score=169.05 Aligned_cols=254 Identities=19% Similarity=0.243 Sum_probs=149.7
Q ss_pred CceeeecCCCC--CHHHHHHHHhCCCCcEEEEcCCCCccccccCcccCCCCchhHHHhhhCCceEEEEeCCcccccCcce
Q 011537 8 GQIEKLNGKEV--SYSEFVEKYMAKNQPVVLTGLMDDWRACKDWVTENGQPNLLFFSTHFGKSKVQVADCGIREFTDQKR 85 (483)
Q Consensus 8 ~~IeRi~~~~l--S~eeF~~~yl~~nkPVII~g~~~~WpA~~~Wt~~~~~~n~dyL~~~~Gd~~V~V~d~~~~~f~~~~~ 85 (483)
+.+-++.-..- .+..|.+.+ .+++|||++|+...-. ...|+ +++|.+.||+..+.+.+|.. +..
T Consensus 10 ~~lL~L~d~~~~~n~~~Fq~hW-~~GePViVs~V~~~~~-~~~W~-------Pe~~~~~~gd~~~~lidC~~-----~~~ 75 (392)
T 2ypd_A 10 KHILWLKDYKNSSNWKLFKECW-KQGQPAVVSGVHKKMN-ISLWK-------AESISLDFGDHQADLLNCKD-----SII 75 (392)
T ss_dssp TTEEEECCTTCTTHHHHHHHHH-TTTCCEEECCHHHHSC-GGGGS-------HHHHHHHHTTSCCCCEETTT-----CCB
T ss_pred CceeEecCCCCcccHHHHHHHH-hCCCcEEEechhhhCc-CCccC-------HHHHHHHhcCceeeeeeCCC-----Ccc
Confidence 45555542111 256887755 5899999999865332 24798 49999999999998889864 344
Q ss_pred eeecHHHHHHHHHhccccccccccccccCCCcceeeeecccccc----CCc----cc-cccCCccccch-hHHHhhhhcc
Q 011537 86 VEMSVSEFVKNWLENSIMENSNASTNEANDKSVLYLKDWHFAKE----YPE----YV-AYRTPLIFCDD-WLNMYLDHFR 155 (483)
Q Consensus 86 ~~m~l~efl~~~~~~~~~~~~~as~~~~~~~~~lYL~d~~~~~~----~P~----l~-~y~~P~~f~dD-wln~~~d~~~ 155 (483)
..+++++|.+-+......... ..+....+-||||.-... +|. +. ...+|.|...+ .+|. ...+|
T Consensus 76 ~~i~v~~Ff~Gf~~~~~r~~~-----~~g~p~~LKLKDWPp~~~F~e~lP~~~~df~~~LPlpEYt~p~G~LNL-As~LP 149 (392)
T 2ypd_A 76 SNANVKEFWDGFEEVSKRQKN-----KSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCNPEGKFNL-ASHLP 149 (392)
T ss_dssp CSCCHHHHHHTSSBGGGC-----------CCCCEEECSSSBTHHHHHHSHHHHHHHHHHCSSHHHHSTTCTTCC-TTTSC
T ss_pred ccCcHHHHhhhccccccCCcC-----CCCCcceeeecCCCChHHHHHHhHHHHHHHHHcCCchHhhCCCccchH-HHhCC
Confidence 678999999866543211000 012356688899975443 333 21 12333333222 2221 11111
Q ss_pred cC-CCCccccccCCccCCCccEEEecC--------CCCCCCcccccCCCccceeEEE-----------------------
Q 011537 156 LH-KDPESYQKDNDICCSDYRFVYMGA--------KGSWTPLHADVFRSYSWSANVC----------------------- 203 (483)
Q Consensus 156 ~~-~~pd~~~~~~~i~~~dyr~l~iGp--------~gs~T~lH~D~~~~~sW~~qV~----------------------- 203 (483)
.. ..||+. ..+|++- .-+.|.||.|+.+.. ++++.
T Consensus 150 ~~~~kPDLG-----------PK~YiAYG~~~~~~~~~gvT~LH~DmsDaV--NiL~h~~~~~~~~~~~~~~~l~~~~~~~ 216 (392)
T 2ypd_A 150 GFFVRPDLG-----------PRLCSAYGVVAAKDHDIGTTNLHIEVSDVV--NILVYVGIAKGNGILSKAGILKKFEEED 216 (392)
T ss_dssp GGGCC---C-----------CEEEEECCSTTTTCTTCCSEEEEECSSEEE--EEEEEEECCBCTTCCCHHHHHHHHHTSC
T ss_pred CCCCCCCCC-----------cchhhhcCcchhcccCCCcceeeeehhhhh--hhhheecccCccccchhhhhhhhhhhcc
Confidence 10 012221 1345432 135799999998877 55443
Q ss_pred ---------------eEEEEEEeCCCCcccccCC--------CCC-Cccccc-cCC---CCcc---c-CCCCCCceeEEE
Q 011537 204 ---------------GKKKWLFLSPSQCHLVFDR--------NLK-GCVYNI-FDD---VSET---D-FPGFKKTLWLEC 251 (483)
Q Consensus 204 ---------------GrKrW~LfPP~~~~~Ly~~--------~~~-s~~~di-~d~---~d~~---~-fP~~~~a~~~e~ 251 (483)
|--.|-+|.+.+.+.|... +.+ ..+.|. .+. ++.+ + +.+ .+++++++
T Consensus 217 ~d~~~~~r~~~~~~~~GAlW~Ifr~~D~~klr~~L~~~~~e~~~~~~~~~dPihdq~~yL~~~~r~~L~ee-~gv~~~~~ 295 (392)
T 2ypd_A 217 LDDILRKRLKDSSEIPGALWHIYAGKDVDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEE-YGVRTCTL 295 (392)
T ss_dssp CCHHHHHHHTCTTCCEEEEEEEECGGGHHHHHHHHHHHHHHHC------CCHHHHTCCCCCHHHHHHHHHH-HCCCCEEE
T ss_pred ccHHHhhhccCCCCCCCceeeeeCHhhHHHHHHHHHHHHHhhCCCccCCCCcCcCCCEEecHHHHHHHHHh-cCCeeEEE
Confidence 2246778887776644210 000 001110 000 0100 0 001 14678999
Q ss_pred EEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCCChHHHHHHH
Q 011537 252 TQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLL 295 (483)
Q Consensus 252 vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~nl~~~~~~l 295 (483)
+|++||+||||+||+|||.|+.+||+|++||+++.|+..+++..
T Consensus 296 ~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~~~~c~~lt 339 (392)
T 2ypd_A 296 IQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLT 339 (392)
T ss_dssp EEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGGHHHHHHHH
T ss_pred EEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhhHHHHHHHH
Confidence 99999999999999999999999999999999999999887753
No 16
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=98.84 E-value=9.8e-08 Score=101.93 Aligned_cols=109 Identities=18% Similarity=0.217 Sum_probs=83.6
Q ss_pred cEEEecCCCCCCCcccccCCCccceeEEEe-EEEEEEeCCCCccccc----CCCCCCccccccCCCCcccCCC---C--C
Q 011537 175 RFVYMGAKGSWTPLHADVFRSYSWSANVCG-KKKWLFLSPSQCHLVF----DRNLKGCVYNIFDDVSETDFPG---F--K 244 (483)
Q Consensus 175 r~l~iGp~gs~T~lH~D~~~~~sW~~qV~G-rKrW~LfPP~~~~~Ly----~~~~~s~~~di~d~~d~~~fP~---~--~ 244 (483)
.++|||..||+|++|.+.....|-+.++.| .|.|+.+|+.+...+. ..+. +. .....+|. + .
T Consensus 262 pqLYig~~gS~t~~H~E~~~l~SiNynhggg~~~Wy~VP~e~~~k~e~l~~k~~~-----~~---~~~~~~~~p~~L~~~ 333 (531)
T 3avr_A 262 VQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPEGYWGVLNDFCEKNNL-----NF---LMGSWWPNLEDLYEA 333 (531)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTTC-----CT---TTSCBCCCHHHHHHT
T ss_pred hheEeecCcccccceecCCcceeeEeecCCCCeEEEEeCHHHHHHHHHHHHHcCC-----Ch---hhceeecCHHHHHhC
Confidence 489999999999999999998888888875 6899999998865321 1110 10 01112331 1 2
Q ss_pred CceeEEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCCChHHH
Q 011537 245 KTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWV 291 (483)
Q Consensus 245 ~a~~~e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~nl~~~ 291 (483)
+.+.+.++|+|||.|++++|-+|+|.|.+-+++++.|+....-+...
T Consensus 334 gIPvyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~~q~~ 380 (531)
T 3avr_A 334 NVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLTACQYK 380 (531)
T ss_dssp TCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCSSHHHHH
T ss_pred CCCeEEEEECCCCEEEECCCceEEEEecceeeeeEEEeccCchHHHH
Confidence 45778999999999999999999999999999999999998766543
No 17
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=98.50 E-value=1.4e-07 Score=95.45 Aligned_cols=109 Identities=18% Similarity=0.192 Sum_probs=82.7
Q ss_pred ccEEEecCCCCCCCcccccCCCccceeEEE-eEEEEEEeCCCCcccc---cCCCCCCccccccCCCCcccCCC---C--C
Q 011537 174 YRFVYMGAKGSWTPLHADVFRSYSWSANVC-GKKKWLFLSPSQCHLV---FDRNLKGCVYNIFDDVSETDFPG---F--K 244 (483)
Q Consensus 174 yr~l~iGp~gs~T~lH~D~~~~~sW~~qV~-GrKrW~LfPP~~~~~L---y~~~~~s~~~di~d~~d~~~fP~---~--~ 244 (483)
-.++|||..||+|++|.+....+|-+.++. |.|.|+.+|+.+...+ ..... .+.. ....+|. + .
T Consensus 202 ~pqLYig~~gS~t~~H~Ed~~l~SiNynhgp~~~~Wy~VP~e~~~~~e~l~~k~~----~d~~---~~~~~~~p~~L~~~ 274 (332)
T 2xxz_A 202 TVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHG----VDYL---TGSWWPILDDLYAS 274 (332)
T ss_dssp SEEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTT----CCTT---TSCBCCCHHHHHHT
T ss_pred hhheEeecCcccccceecCCcceeEEeecCCCceEEEEECHHHHHHHHHHHHhcC----Cchh---hceecCCHHHHHhC
Confidence 358999999999999999998887788887 6789999999876532 11000 0110 0112231 1 2
Q ss_pred CceeEEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCCChH
Q 011537 245 KTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLS 289 (483)
Q Consensus 245 ~a~~~e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~nl~ 289 (483)
..+.+.++|+|||.|++++|-+|+|.|.+-+++++.|+...+.+.
T Consensus 275 gIPvyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~~q 319 (332)
T 2xxz_A 275 NIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQ 319 (332)
T ss_dssp TCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEESCTTGG
T ss_pred CCCeEEEEECCCCEEEECCCceEEEEecceeeEEEEEeCCCcHHH
Confidence 357889999999999999999999999999999999999887664
No 18
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=98.41 E-value=2.7e-06 Score=89.71 Aligned_cols=107 Identities=18% Similarity=0.175 Sum_probs=79.9
Q ss_pred cEEEecCCCCCCCcccccCCCccceeEEEe-EEEEEEeCCCCcccc---cCCCCCCccccccCCCCcccCCC---C--CC
Q 011537 175 RFVYMGAKGSWTPLHADVFRSYSWSANVCG-KKKWLFLSPSQCHLV---FDRNLKGCVYNIFDDVSETDFPG---F--KK 245 (483)
Q Consensus 175 r~l~iGp~gs~T~lH~D~~~~~sW~~qV~G-rKrW~LfPP~~~~~L---y~~~~~s~~~di~d~~d~~~fP~---~--~~ 245 (483)
.++|||..||+|++|.+....+|-+.++-| .|.|+.+|+.+...+ ..... .++. ....+|. + .+
T Consensus 237 pqLYigm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l~~k~~----~d~l---~~~~~pspe~L~kag 309 (510)
T 4ask_A 237 VQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHG----VDYL---TGSWWPILDDLYASN 309 (510)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTT----CCTT---TSCBCCCHHHHHHTT
T ss_pred hheEEccccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHHHHHhC----cchh---hccccCCHHHHHhCC
Confidence 479999999999999999888877888865 699999999876532 11100 0110 0111221 1 23
Q ss_pred ceeEEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCCCh
Q 011537 246 TLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNL 288 (483)
Q Consensus 246 a~~~e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~nl 288 (483)
.+.+.++|+|||.|++++|-+|+|.|.+-+++++.|+...+-.
T Consensus 310 IPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~niaWNvap~t~~ 352 (510)
T 4ask_A 310 IPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAY 352 (510)
T ss_dssp CCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECBSSHH
T ss_pred CCeEEEEECCCCEEEECCCceEEEEecCeeeeeEEEecCCCHH
Confidence 4778999999999999999999999999999999998876543
No 19
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=98.29 E-value=3.2e-07 Score=93.26 Aligned_cols=114 Identities=18% Similarity=0.237 Sum_probs=83.4
Q ss_pred cEEEecCCCCCCCcccccCCCccceeEEEeE-EEEEEeCCCCcccc-------cCCCCCCccccccCCCCcccCCC-C--
Q 011537 175 RFVYMGAKGSWTPLHADVFRSYSWSANVCGK-KKWLFLSPSQCHLV-------FDRNLKGCVYNIFDDVSETDFPG-F-- 243 (483)
Q Consensus 175 r~l~iGp~gs~T~lH~D~~~~~sW~~qV~Gr-KrW~LfPP~~~~~L-------y~~~~~s~~~di~d~~d~~~fP~-~-- 243 (483)
.++|+|..+|.+.+|.+....+|.+.+..|. |.|+.+|+.+...+ ++.....+ .++......--.|. +
T Consensus 178 P~LYiGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~~~~c-~~fL~h~~~lisP~~L~~ 256 (354)
T 3dxt_A 178 PYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGC-GAFLRHKVALISPTVLKE 256 (354)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHHHHHC-TTGGGGCCEEECHHHHHH
T ss_pred eeeeeccccCCCcceecCCcceEEEEEecCCceEEEEeCHHHHHHHHHHHHHhCchhhhhc-HHHHhcCcccCCHHHHHH
Confidence 3799999999999999999999999999998 99999999986532 11000000 00000000001111 1
Q ss_pred CCceeEEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCCChH
Q 011537 244 KKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLS 289 (483)
Q Consensus 244 ~~a~~~e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~nl~ 289 (483)
.+.+.+.++|+|||.|++-+|.||.+.|.+-+++.+.||..+.-++
T Consensus 257 ~GIpv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~ 302 (354)
T 3dxt_A 257 NGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWID 302 (354)
T ss_dssp TTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCGGGHH
T ss_pred CCCceEEEEeCCCcEEEECCCceEEEeeccccHhHhhccCcHHHHH
Confidence 2457889999999999999999999999999999999999875553
No 20
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=97.83 E-value=1e-05 Score=83.30 Aligned_cols=113 Identities=17% Similarity=0.174 Sum_probs=80.7
Q ss_pred cEEEecCCCCCCCcccccCCCccceeEEEe-EEEEEEeCCCCccccc-------CCCCCCccccccCCCCcccCCC-C--
Q 011537 175 RFVYMGAKGSWTPLHADVFRSYSWSANVCG-KKKWLFLSPSQCHLVF-------DRNLKGCVYNIFDDVSETDFPG-F-- 243 (483)
Q Consensus 175 r~l~iGp~gs~T~lH~D~~~~~sW~~qV~G-rKrW~LfPP~~~~~Ly-------~~~~~s~~~di~d~~d~~~fP~-~-- 243 (483)
.++|+|..+|.+.+|.+....+|-+.+..| .|.|+.+|+.+...+- +.....+ .++......--.|. +
T Consensus 196 P~LYiGm~~S~f~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~~~~~P~~~~~~-~~~L~h~~~~isP~~L~~ 274 (381)
T 2ox0_A 196 PYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSC-EAFLRHKMTLISPLMLKK 274 (381)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHHHHHC-TTGGGGSCEEECHHHHHH
T ss_pred ceEEeeccccCcCceecCCcceeeEEeecCCceEEEecCHHHHHHHHHHHHHhChhhhhcc-hHHhhccccccCHHHHHH
Confidence 479999999999999999888877888777 5999999999865321 1000000 00000000000121 1
Q ss_pred CCceeEEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCCCh
Q 011537 244 KKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNL 288 (483)
Q Consensus 244 ~~a~~~e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~nl 288 (483)
.+.+.+.++|+|||.|++=+|-||.+.|.+-+++.+.||....-+
T Consensus 275 ~GIpv~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAvNFA~~~Wl 319 (381)
T 2ox0_A 275 YGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWI 319 (381)
T ss_dssp TTCCCEEEEECTTCEEEECTTCEEEEEECSSEEEEEEEECCTTHH
T ss_pred CCCceEEEEecCCCEEEECCCcEEEeecCcccHHHHhccCcHHHH
Confidence 245788999999999999999999999999999999999886444
No 21
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=97.81 E-value=1.6e-05 Score=81.38 Aligned_cols=115 Identities=17% Similarity=0.169 Sum_probs=80.3
Q ss_pred cEEEecCCCCCCCcccccCCCccceeEEEeE-EEEEEeCCCCcccc-------cCCCCCCccccccCCCCcccCCC-C--
Q 011537 175 RFVYMGAKGSWTPLHADVFRSYSWSANVCGK-KKWLFLSPSQCHLV-------FDRNLKGCVYNIFDDVSETDFPG-F-- 243 (483)
Q Consensus 175 r~l~iGp~gs~T~lH~D~~~~~sW~~qV~Gr-KrW~LfPP~~~~~L-------y~~~~~s~~~di~d~~d~~~fP~-~-- 243 (483)
.++|+|..+|.+++|.+-...+|-+.+..|. |.|+.+|+.+...+ ++.....+ .++......--.|. +
T Consensus 221 P~LYvGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~~~~c-~~fL~h~~~lisP~~L~~ 299 (373)
T 3opt_A 221 SYLYAGLWKASFSWHLEDQDLYSINYIHFGAPKQWYSIPQEDRFKFYKFMQEQFPEEAKNC-PEFLRHKMFLASPKLLQE 299 (373)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEECCGGGHHHHHHHHHHSSHHHHSSC-SSCTTTSCEEECHHHHHT
T ss_pred hheeeccccCCcceeecCCcceeEEEeecCCCeEEEEeCHHHHHHHHHHHHHhChhhhhhC-HHHhhCCcccCCHHHHHh
Confidence 4799999999999999998888778888886 99999999986532 11000000 00000000001121 1
Q ss_pred CCceeEEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCCChHH
Q 011537 244 KKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSW 290 (483)
Q Consensus 244 ~~a~~~e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~nl~~ 290 (483)
.+.+.+.++|+|||.|++=+|-||.+.|.+-+++.+.||....-++.
T Consensus 300 ~GIpv~r~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~~ 346 (373)
T 3opt_A 300 NGIRCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFALEEWLPI 346 (373)
T ss_dssp TTCCCEEEEECTTCEEEECTTCCEEEEESSSEEEEEEEECCC-----
T ss_pred cCCceEEEEECCCCEEEECCCceEEEEecCccHHHHHccCcHHHHHh
Confidence 24578899999999999999999999999999999999998866643
No 22
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=95.23 E-value=0.063 Score=49.25 Aligned_cols=72 Identities=17% Similarity=0.113 Sum_probs=50.1
Q ss_pred CCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCCcEEE
Q 011537 181 AKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQNEIIF 260 (483)
Q Consensus 181 p~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pGDiLF 260 (483)
++|..|+.| |...+..+..++.|+=+-..|.+.... | ...-+.++.|||+.+
T Consensus 77 ~PGq~S~iH-dH~~s~~~~~VL~G~l~e~~y~~~~~~-----------------------~----~~~~~~~l~~G~~~~ 128 (171)
T 3eqe_A 77 PPNKETTVH-DHGQSIGCAMVLEGKLLNSIYRSTGEH-----------------------A----ELSNSYFVHEGECLI 128 (171)
T ss_dssp CTTCBCCEE-CCTTCEEEEEEEESEEEEEEEEECSSS-----------------------E----EEEEEEEEETTCEEE
T ss_pred CCCCCcccc-cCCCceEEEEEEeeeEEEEEeecCCCc-----------------------e----eecceEEeCCCcEEE
Confidence 457889997 555667778899999775554421100 0 012367899999999
Q ss_pred eCCCCeEEEEeCCCcEEEee
Q 011537 261 VPSGWYHQVHNLEDTISINH 280 (483)
Q Consensus 261 VPsGWwHqV~nledsISIn~ 280 (483)
.|++..|+|.|..+..+|+.
T Consensus 129 ~~~~~iH~V~N~~~~~aVSl 148 (171)
T 3eqe_A 129 STKGLIHKMSNPTSERMVSL 148 (171)
T ss_dssp ECTTCEEEEECCSSSCEEEE
T ss_pred eCCCCEEEEECCCCCCEEEE
Confidence 99999999999876444443
No 23
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=94.83 E-value=0.019 Score=47.43 Aligned_cols=25 Identities=16% Similarity=0.085 Sum_probs=22.7
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
+..+.+||.+|+|.|-+|++.|..+
T Consensus 60 ~~~l~~G~~~~ip~G~~H~~~N~g~ 84 (98)
T 3lag_A 60 LAQLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp CCCBCTTCCEEECTTCEEEEBCCSS
T ss_pred EEEecCCcEEEEcCCCcEECEECCC
Confidence 4578999999999999999999976
No 24
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=94.34 E-value=0.14 Score=54.23 Aligned_cols=73 Identities=10% Similarity=0.102 Sum_probs=52.7
Q ss_pred EEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeC
Q 011537 176 FVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQ 255 (483)
Q Consensus 176 ~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~p 255 (483)
.+-+.| |+..++|+.+.. .-|..++.|+=+..+..+.- .+.+..+++|
T Consensus 342 ~v~l~p-Ga~~~pH~Hp~a-~Ei~yVl~G~~~v~v~~~~G------------------------------~~~~~~~l~~ 389 (476)
T 1fxz_A 342 FGSLRK-NAMFVPHYNLNA-NSIIYALNGRALIQVVNCNG------------------------------ERVFDGELQE 389 (476)
T ss_dssp EEEECT-TCEEEEEEETTC-CEEEEEEESEEEEEEECTTS------------------------------CEEEEEEEET
T ss_pred EEEecC-CceecceECCCC-CEEEEEEeCEEEEEEEecCC------------------------------CEEeeeEEcC
Confidence 355665 557889998744 45689999998877765321 1245668999
Q ss_pred CcEEEeCCCCeEEEEeCCCcEEEee
Q 011537 256 NEIIFVPSGWYHQVHNLEDTISINH 280 (483)
Q Consensus 256 GDiLFVPsGWwHqV~nledsISIn~ 280 (483)
||+++||+|+.|.+.|.++.+.+-.
T Consensus 390 GDv~viP~G~~H~~~ng~~~l~~l~ 414 (476)
T 1fxz_A 390 GRVLIVPQNFVVAARSQSDNFEYVS 414 (476)
T ss_dssp TCEEEECTTCEEEEEECSTTEEEEE
T ss_pred CCEEEECCCCeEEEEeCCCCEEEEE
Confidence 9999999999999999655554444
No 25
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=94.29 E-value=0.11 Score=54.80 Aligned_cols=69 Identities=7% Similarity=0.048 Sum_probs=52.9
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
+-+.| |+..++|+.+.. ..|..++.|+=+..++.+.. .+.+..++++|
T Consensus 327 v~l~p-G~~~~pH~Hp~A-~Ei~yV~~G~~~v~vv~~~g------------------------------~~~~~~~l~~G 374 (459)
T 2e9q_A 327 GVLYS-NAMVAPHYTVNS-HSVMYATRGNARVQVVDNFG------------------------------QSVFDGEVREG 374 (459)
T ss_dssp EEECT-TCEEEEEEESSC-CEEEEEEEEEEEEEEECTTS------------------------------CEEEEEEEETT
T ss_pred EEeeC-CcCccceECCCC-CEEEEEEeeEEEEEEEeCCC------------------------------CEEEeeEEeCC
Confidence 45555 667889998854 57899999999998887542 12345689999
Q ss_pred cEEEeCCCCeEEEEeCCCcEE
Q 011537 257 EIIFVPSGWYHQVHNLEDTIS 277 (483)
Q Consensus 257 DiLFVPsGWwHqV~nledsIS 277 (483)
|+++||.|+.|.+.|.++.+.
T Consensus 375 Dv~v~P~G~~H~~~ng~~~~~ 395 (459)
T 2e9q_A 375 QVLMIPQNFVVIKRASDRGFE 395 (459)
T ss_dssp CEEEECTTCEEEEEEEEEEEE
T ss_pred cEEEECCCCEEEEEeCCCCeE
Confidence 999999999999999544433
No 26
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=94.20 E-value=0.1 Score=52.21 Aligned_cols=75 Identities=21% Similarity=0.208 Sum_probs=49.0
Q ss_pred EecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeC-C
Q 011537 178 YMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQ-N 256 (483)
Q Consensus 178 ~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~p-G 256 (483)
..-..|+...+|+.. .+.-+...|+|+=++.|..+.. .+. ..++. |
T Consensus 277 s~~~~g~~rg~h~h~-~~~e~~~~~~G~~~~~~~~~~~------------------------------~~~--~~~~~~~ 323 (369)
T 3st7_A 277 NISKPGITKGNHWHH-TKNEKFLVVSGKGVIRFRHVND------------------------------DEI--IEYYVSG 323 (369)
T ss_dssp EEECTTCEEEEEECS-SCCEEEEEEESEEEEEEEETTC------------------------------CCC--EEEEEET
T ss_pred EEecCCceecccccc-CcceEEEEEeeeEEEEEEcCCC------------------------------CcE--EEEEecC
Confidence 334567777888865 3445678888887777753221 011 23333 6
Q ss_pred ---cEEEeCCCCeEEEEeCCCcEEEeeecCCC
Q 011537 257 ---EIIFVPSGWYHQVHNLEDTISINHNWFNG 285 (483)
Q Consensus 257 ---DiLFVPsGWwHqV~nledsISIn~Nf~~~ 285 (483)
++||||+||||...|+++.-.+-..|.+.
T Consensus 324 ~~~~~~~ip~g~~h~~~n~~~~~~~~~~~~~~ 355 (369)
T 3st7_A 324 DKLEVVDIPVGYTHNIENLGDTDMVTIMWVNE 355 (369)
T ss_dssp TBCCEEEECTTEEEEEEECSSSCEEEEEEESS
T ss_pred CcceEEEeCCCceEEeEEcCCCcEEEEEecCc
Confidence 99999999999999998544455555554
No 27
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=93.99 E-value=0.061 Score=49.18 Aligned_cols=63 Identities=13% Similarity=0.061 Sum_probs=45.9
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
+-+-|.+ ..+.| . ....-|..++.|+=+..+..|.. ..+..+++|
T Consensus 46 ~~l~pg~-~~~pH-h-~~a~E~~yVl~G~~~v~v~~~~~--------------------------------~~~~~l~~G 90 (178)
T 1dgw_A 46 YCSKPNT-LLLPH-H-SDSDLLVLVLEGQAILVLVNPDG--------------------------------RDTYKLDQG 90 (178)
T ss_dssp EEECTTE-EEEEE-E-ESSEEEEEEEESEEEEEEEETTE--------------------------------EEEEEEETT
T ss_pred EEecCCc-EecCc-C-CCCCEEEEEEeEEEEEEEEeCCC--------------------------------cEEEEECCC
Confidence 4555544 45677 2 34456689999998877765431 124689999
Q ss_pred cEEEeCCCCeEEEEeCCC
Q 011537 257 EIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 257 DiLFVPsGWwHqV~nled 274 (483)
|+++||+|..|...|.++
T Consensus 91 Dv~~~P~g~~H~~~N~g~ 108 (178)
T 1dgw_A 91 DAIKIQAGTPFYLINPDN 108 (178)
T ss_dssp EEEEECTTCCEEEEECCS
T ss_pred CEEEECCCCeEEEEeCCC
Confidence 999999999999999865
No 28
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=93.96 E-value=0.16 Score=54.16 Aligned_cols=72 Identities=8% Similarity=0.030 Sum_probs=51.5
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
+-+.| |+..++|+.+.. .-|..++.|+=+..+..+.- .+.+..++++|
T Consensus 377 v~L~P-G~~~~pH~Hp~a-~Ei~yVl~G~~~v~vv~~~G------------------------------~~~~~~~l~~G 424 (510)
T 3c3v_A 377 GNLYR-NALFVPHYNTNA-HSIIYALRGRAHVQVVDSNG------------------------------NRVYDEELQEG 424 (510)
T ss_dssp EEEET-TCEEEEEEESSC-CEEEEEEESEEEEEEECTTS------------------------------CEEEEEEEETT
T ss_pred EEecC-CceecceECCCC-CEEEEEEeCEEEEEEEeCCC------------------------------CEEEeEEEcCC
Confidence 44555 557788988743 45688999988877765421 12346689999
Q ss_pred cEEEeCCCCeEEEEeCCCcEEEee
Q 011537 257 EIIFVPSGWYHQVHNLEDTISINH 280 (483)
Q Consensus 257 DiLFVPsGWwHqV~nledsISIn~ 280 (483)
|+++||+|+.|.+.|.++.+.+-.
T Consensus 425 Dv~viP~G~~H~~~Ng~e~l~~l~ 448 (510)
T 3c3v_A 425 HVLVVPQNFAVAGKSQSDNFEYVA 448 (510)
T ss_dssp CEEEECTTCEEEEEECSSEEEEEE
T ss_pred cEEEECCCCeEEEEeCCCCEEEEE
Confidence 999999999999999655544444
No 29
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=93.85 E-value=0.13 Score=54.99 Aligned_cols=71 Identities=11% Similarity=0.038 Sum_probs=53.0
Q ss_pred EEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeC
Q 011537 176 FVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQ 255 (483)
Q Consensus 176 ~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~p 255 (483)
.+-+.| |+..++|+.+. +.-|..++.|+=+..++.+.- .+.+..++++
T Consensus 398 ~v~L~p-Ggm~~PHwHp~-A~Ei~yVl~G~~rv~~V~~~G------------------------------~~v~~~~L~~ 445 (531)
T 3fz3_A 398 RGFFYR-NGIYSPHWNVN-AHSVVYVIRGNARVQVVNENG------------------------------DAILDQEVQQ 445 (531)
T ss_dssp EEEECT-TCEEEEEEESS-CCEEEEEEEEEEEEEEECTTS------------------------------CEEEEEEEET
T ss_pred EEEeec-CccccceEcCC-CCEEEEEEeCcEEEEEEeCCC------------------------------cEEEEEEecC
Confidence 356676 45568899885 446899999999988877531 1245679999
Q ss_pred CcEEEeCCCCeEEEEeCCCcEEE
Q 011537 256 NEIIFVPSGWYHQVHNLEDTISI 278 (483)
Q Consensus 256 GDiLFVPsGWwHqV~nledsISI 278 (483)
||+++||.|+.|...+.++.+.+
T Consensus 446 GDV~v~P~G~~H~~~ag~e~l~f 468 (531)
T 3fz3_A 446 GQLFIVPQNHGVIQQAGNQGFEY 468 (531)
T ss_dssp TCEEEECTTCEEEEEEEEEEEEE
T ss_pred CeEEEECCCCeEEEecCCCCEEE
Confidence 99999999999987765454444
No 30
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=93.71 E-value=0.21 Score=53.11 Aligned_cols=70 Identities=13% Similarity=0.109 Sum_probs=54.4
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
+-+.| |+..++|+.+.. ..|..++.|+=+..++.|.- .+.+.-++++|
T Consensus 363 v~L~p-Ggm~~PHwHp~A-~Ei~yVl~G~~rv~~V~~~g------------------------------~~~f~~~l~~G 410 (496)
T 3ksc_A 363 GSLHK-NAMFVPHYNLNA-NSIIYALKGRARLQVVNCNG------------------------------NTVFDGELEAG 410 (496)
T ss_dssp EEEET-TCEEEEEEESSC-CEEEEEEESEEEEEEECTTS------------------------------CEEEEEEEETT
T ss_pred EEeeC-CeEECCeeCCCC-CEEEEEEeceEEEEEEeCCC------------------------------cEEEEEEecCC
Confidence 55665 567889998864 46899999999999987641 12345689999
Q ss_pred cEEEeCCCCeEEEEeCCCcEEE
Q 011537 257 EIIFVPSGWYHQVHNLEDTISI 278 (483)
Q Consensus 257 DiLFVPsGWwHqV~nledsISI 278 (483)
|+++||.|+.|...|.++.+.+
T Consensus 411 DV~v~P~G~~H~~~a~~e~~~~ 432 (496)
T 3ksc_A 411 RALTVPQNYAVAAKSLSDRFSY 432 (496)
T ss_dssp CEEEECTTCEEEEEECSSEEEE
T ss_pred eEEEECCCCEEEEEeCCCCEEE
Confidence 9999999999998888655443
No 31
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=93.54 E-value=0.15 Score=51.25 Aligned_cols=65 Identities=17% Similarity=0.374 Sum_probs=47.0
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
+.+-| |+..+.|+... ..-|..++.|+=+..+..++. ......+++|
T Consensus 57 ~~l~p-g~~~~~H~H~~-~~E~~yVl~G~~~~~v~~~~g-------------------------------~~~~~~l~~G 103 (361)
T 2vqa_A 57 MSLEP-GAIRELHWHAN-AAEWAYVMEGRTRITLTSPEG-------------------------------KVEIADVDKG 103 (361)
T ss_dssp EEECT-TCEEEEEECTT-CCEEEEEEESEEEEEEECTTS-------------------------------CEEEEEEETT
T ss_pred EEEcC-CCCCCceeCCC-CCEEEEEEEeEEEEEEEeCCC-------------------------------cEEEEEEcCC
Confidence 44555 44556787651 335589999998888765521 0124689999
Q ss_pred cEEEeCCCCeEEEEeCCC
Q 011537 257 EIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 257 DiLFVPsGWwHqV~nled 274 (483)
|++|||+|.+|...|.++
T Consensus 104 D~~~ip~g~~H~~~n~~~ 121 (361)
T 2vqa_A 104 GLWYFPRGWGHSIEGIGP 121 (361)
T ss_dssp EEEEECTTCEEEEEECSS
T ss_pred CEEEECCCCeEEEEeCCC
Confidence 999999999999999973
No 32
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=93.30 E-value=0.064 Score=55.01 Aligned_cols=40 Identities=15% Similarity=0.402 Sum_probs=29.8
Q ss_pred EEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCCChHHH
Q 011537 249 LECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWV 291 (483)
Q Consensus 249 ~e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~nl~~~ 291 (483)
-++.+++||++++|+|.||++.|.++.-.+ |+...+.+.+
T Consensus 142 ~~~~~~~GD~v~iP~g~~H~~~N~gde~l~---~l~v~D~Pl~ 181 (368)
T 3nw4_A 142 DPVRMSRGDLLLTPGWCFHGHMNDTDQPMA---WIDGLDIPFS 181 (368)
T ss_dssp EEEEEETTCEEEECTTCCEEEEECSSSCEE---EEEEECHHHH
T ss_pred EEEEEeCCCEEEECCCCcEEeEeCCCCCeE---EEEecchHHH
Confidence 478999999999999999999998764322 4443455543
No 33
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=93.14 E-value=0.22 Score=46.17 Aligned_cols=68 Identities=16% Similarity=0.137 Sum_probs=47.4
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
+-+.| |...+.|+.+.. .-+..++.|+=+..+..+... ..+.+..++++|
T Consensus 77 ~~l~p-g~~~~~H~H~~~-~E~~~Vl~G~~~v~~~~~~~~----------------------------~~~~~~~~l~~G 126 (201)
T 1fi2_A 77 VDFAP-GGTNPPHIHPRA-TEIGMVMKGELLVGILGSLDS----------------------------GNKLYSRVVRAG 126 (201)
T ss_dssp EEECT-TCEEEEEECTTC-CEEEEEEESEEEEEEECCGGG----------------------------TTCEEEEEEETT
T ss_pred EEECC-CCCCCCeECCCC-CEEEEEEeCEEEEEEEcCCCC----------------------------CCeEEEEEECCC
Confidence 34555 446778987642 234888999877766543210 012346799999
Q ss_pred cEEEeCCCCeEEEEeCCC
Q 011537 257 EIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 257 DiLFVPsGWwHqV~nled 274 (483)
|+++||+|-+|...|.++
T Consensus 127 D~~~iP~g~~H~~~N~g~ 144 (201)
T 1fi2_A 127 ETFVIPRGLMHFQFNVGK 144 (201)
T ss_dssp CEEEECTTCCEEEEECSS
T ss_pred CEEEECCCCeEEEEeCCC
Confidence 999999999999999865
No 34
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=93.02 E-value=0.29 Score=45.90 Aligned_cols=75 Identities=19% Similarity=0.166 Sum_probs=51.2
Q ss_pred CCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCCcEEE
Q 011537 181 AKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQNEIIF 260 (483)
Q Consensus 181 p~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pGDiLF 260 (483)
++|..|+.| |+..+..|..++.|.=+-..|....... . + -...-+.++.|||+.|
T Consensus 78 ~PGq~SpiH-DH~~s~g~i~VL~G~l~e~~y~~~~~~~-----------------~----~---l~~~~~~~l~~G~v~~ 132 (200)
T 3eln_A 78 GEGHGSSIH-DHTDSHCFLKLLQGNLKETLFDWPDKKS-----------------N----E---MIKKSERTLRENQCAY 132 (200)
T ss_dssp CTTCBCCEE-CCTTCEEEEEEEESCEEEEEECCCCSSC-----------------C----C---CCEEEEEEECTTCEEE
T ss_pred CCCCcCCCc-cCCCceEEEEEEeeeEEEEEeecCCCCc-----------------c----c---ccccceEEeCCCCEEE
Confidence 458889999 5556778899999986655544211000 0 0 1123468999999999
Q ss_pred e-CCCCeEEEEeCC-C--cEEEee
Q 011537 261 V-PSGWYHQVHNLE-D--TISINH 280 (483)
Q Consensus 261 V-PsGWwHqV~nle-d--sISIn~ 280 (483)
+ |++=.|+|.|.. + +|||..
T Consensus 133 ~~~~~giH~V~N~s~~~~avSlHv 156 (200)
T 3eln_A 133 INDSIGLHRVENVSHTEPAVSLHL 156 (200)
T ss_dssp ECTTTCEEEEECCCSSCCEEEEEE
T ss_pred ecCCCcEEEEECCCCCCCEEEEEe
Confidence 9 877899999986 3 555554
No 35
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=92.58 E-value=0.25 Score=50.20 Aligned_cols=31 Identities=13% Similarity=0.214 Sum_probs=25.4
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCcEEEee
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDTISINH 280 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nledsISIn~ 280 (483)
++.+++||+++||++.+|++.|.++.+-+.+
T Consensus 307 ~~~~~~GD~~~vP~~~~H~~~n~e~~~l~~~ 337 (354)
T 2d40_A 307 TFSFSAKDIFVVPTWHGVSFQTTQDSVLFSF 337 (354)
T ss_dssp EEEEETTCEEEECTTCCEEEEEEEEEEEEEE
T ss_pred EEEEcCCCEEEECCCCeEEEEeCCCEEEEEE
Confidence 5799999999999999999999765444443
No 36
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=92.38 E-value=0.38 Score=45.50 Aligned_cols=77 Identities=21% Similarity=0.116 Sum_probs=49.9
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
++.=++|..||.|= +. +..+..++.|.=+=..|.......+ . + ..-+.++.||
T Consensus 77 ~l~W~PGq~spiHD-H~-swg~~~Vl~G~l~e~~y~~~~~g~~---------~-----------~-----~~~~~~l~~G 129 (211)
T 3uss_A 77 SFVWGPGQITPVHD-HR-VWGLIGMLRGAEYSQPYAFDAGGRP---------H-----------P-----SGARRRLEPG 129 (211)
T ss_dssp EEEECTTCBCCSBC-CS-SCEEEEEEESCEEEEEEEECTTSCE---------E-----------E-----CSCCEEECTT
T ss_pred EEEECCCCcCCCCC-CC-eeEEEEeeeceEEEEEeeeCCCCCc---------c-----------c-----ccceEEecCC
Confidence 44446688899994 44 6777899999865544432110000 0 0 0113689999
Q ss_pred cEEEeCCC--CeEEEEeCC-C--cEEEee
Q 011537 257 EIIFVPSG--WYHQVHNLE-D--TISINH 280 (483)
Q Consensus 257 DiLFVPsG--WwHqV~nle-d--sISIn~ 280 (483)
|+.+++++ ..|+|.|.. + +|||..
T Consensus 130 ~v~~~~p~~g~IH~V~N~~~d~~avSLHv 158 (211)
T 3uss_A 130 EVEALSPRIGDVHQVSNAFSDRTSISIHV 158 (211)
T ss_dssp CEEEEBTTTBCCEEEEESCSSSCEEEEEE
T ss_pred CEEEECCCCCCEEEEccCCCCCCEEEEEE
Confidence 99999987 999999983 4 555554
No 37
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=92.28 E-value=0.39 Score=50.66 Aligned_cols=66 Identities=6% Similarity=0.003 Sum_probs=50.9
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
+-+.| |+..++|+.+. ...|..++.|+=+..++.|.-. +.+..++++|
T Consensus 328 v~L~p-Ggm~~PHwHp~-A~Ei~yVl~G~~rv~~V~~~g~------------------------------~~f~~~l~~G 375 (466)
T 3kgl_A 328 GSIRQ-NAMVLPQWNAN-ANAVLYVTDGEAHVQVVNDNGD------------------------------RVFDGQVSQG 375 (466)
T ss_dssp EEEET-TEEEEEEEESS-CCEEEEEEESEEEEEEECTTSC------------------------------EEEEEEEETT
T ss_pred EEeec-CcEeeeeECCC-CCEEEEEEeceEEEEEEeCCCc------------------------------EEEEeEecCC
Confidence 55665 55678999886 4478999999999998876421 2346789999
Q ss_pred cEEEeCCCCeEEEEeCCC
Q 011537 257 EIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 257 DiLFVPsGWwHqV~nled 274 (483)
|+++||.|+.|...+.++
T Consensus 376 DV~v~P~G~~H~~~ag~e 393 (466)
T 3kgl_A 376 QLLSIPQGFSVVKRATSE 393 (466)
T ss_dssp CEEEECTTCEEEEEECSS
T ss_pred cEEEECCCCeEEEEcCCC
Confidence 999999999998855444
No 38
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=92.10 E-value=0.28 Score=49.27 Aligned_cols=26 Identities=23% Similarity=0.457 Sum_probs=23.6
Q ss_pred EEEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 249 LECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 249 ~e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
....+++||+++||+|.+|...|.++
T Consensus 278 ~~~~l~~GD~~~ip~~~~H~~~n~~~ 303 (361)
T 2vqa_A 278 SVSRLQQGDVGYVPKGYGHAIRNSSQ 303 (361)
T ss_dssp EEEEECTTCEEEECTTCEEEEECCSS
T ss_pred EEEEECCCCEEEECCCCeEEeEECCC
Confidence 36799999999999999999999865
No 39
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=91.92 E-value=0.42 Score=50.82 Aligned_cols=72 Identities=11% Similarity=0.063 Sum_probs=51.6
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
+-+.| |+..++|+.+.. .-|..++.|+=+..+..+.. .+.+..+++||
T Consensus 372 v~l~p-G~~~~pH~Hp~a-~Ei~yVl~G~~~v~v~~~~g------------------------------~~~~~~~l~~G 419 (493)
T 2d5f_A 372 VVLYR-NGIYSPHWNLNA-NSVIYVTRGKGRVRVVNAQG------------------------------NAVFDGELRRG 419 (493)
T ss_dssp EEECT-TCEEEEEEESSC-CEEEEEEEEEEEEEEECTTS------------------------------CEEEEEEEETT
T ss_pred EEccC-CceeeeeECCCC-CEEEEEEeceEEEEEEcCCC------------------------------CEEEeEEEcCC
Confidence 45555 456889998743 44688999998877765321 12345789999
Q ss_pred cEEEeCCCCeEEEEeCCCcEEEee
Q 011537 257 EIIFVPSGWYHQVHNLEDTISINH 280 (483)
Q Consensus 257 DiLFVPsGWwHqV~nledsISIn~ 280 (483)
|+++||+|+.|...|.++.+.+-.
T Consensus 420 Dv~vvP~G~~H~~~n~~e~~~~l~ 443 (493)
T 2d5f_A 420 QLLVVPQNFVVAEQGGEQGLEYVV 443 (493)
T ss_dssp CEEEECTTCEEEEEEEEEEEEEEE
T ss_pred CEEEECCCCeEeeeeCCCCEEEEE
Confidence 999999999999999765444433
No 40
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=91.71 E-value=0.38 Score=49.69 Aligned_cols=25 Identities=20% Similarity=0.296 Sum_probs=23.1
Q ss_pred EEEEEeCCcEEEeCCCCeEEEEeCC
Q 011537 249 LECTQEQNEIIFVPSGWYHQVHNLE 273 (483)
Q Consensus 249 ~e~vq~pGDiLFVPsGWwHqV~nle 273 (483)
-++.+++||+++||+|.||++.|..
T Consensus 332 e~~~~~~GD~~~iP~g~~H~~~N~g 356 (394)
T 3bu7_A 332 KRFDWSEHDIFCVPAWTWHEHCNTQ 356 (394)
T ss_dssp EEEEECTTCEEEECTTCCEEEEECC
T ss_pred EEEEEeCCCEEEECCCCeEEeEeCC
Confidence 4689999999999999999999975
No 41
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=91.69 E-value=0.2 Score=46.18 Aligned_cols=27 Identities=26% Similarity=0.492 Sum_probs=24.4
Q ss_pred eEEEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 248 WLECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 248 ~~e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
.....++|||+++||+|.+|...|.++
T Consensus 118 ~~~~~l~~GD~v~ip~g~~H~~~N~g~ 144 (190)
T 1x82_A 118 AKWISMEPGTVVYVPPYWAHRTVNIGD 144 (190)
T ss_dssp EEEEEECTTCEEEECTTCEEEEEECSS
T ss_pred EEEEEECCCcEEEECCCCeEEEEECCc
Confidence 456899999999999999999999865
No 42
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=91.29 E-value=0.45 Score=39.75 Aligned_cols=31 Identities=16% Similarity=0.342 Sum_probs=26.7
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCcEEEee
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDTISINH 280 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nledsISIn~ 280 (483)
+..++|||+++||+|=.|.+.|.+++..+..
T Consensus 75 ~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~ 105 (114)
T 3fjs_A 75 QRRLHQGDLLYLGAGAAHDVNAITNTSLLVT 105 (114)
T ss_dssp EEEECTTEEEEECTTCCEEEEESSSEEEEEE
T ss_pred EEEECCCCEEEECCCCcEEEEeCCCcEEEEE
Confidence 5789999999999999999999988655443
No 43
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=91.28 E-value=0.53 Score=49.65 Aligned_cols=69 Identities=10% Similarity=0.109 Sum_probs=52.2
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
+-+.| |+..++|+.+.. ..|..++.|+=+..++.|.. .+.+..++++|
T Consensus 328 v~l~p-Ggm~~PHwHp~A-~Ei~yV~~G~~~v~vV~~~g------------------------------~~~f~~~l~~G 375 (465)
T 3qac_A 328 GVLYR-NAMMAPHYNLNA-HNIMYCVRGRGRIQIVNDQG------------------------------QSVFDEELSRG 375 (465)
T ss_dssp EEECT-TCEEEEEEESSC-CEEEEEEEEEEEEEEECTTS------------------------------CEEEEEEEETT
T ss_pred EEecC-CcEeeeEECCCC-CEEEEEEeCCEEEEEEeCCC------------------------------cEEEEEEecCC
Confidence 45555 566789998864 47899999999999987641 12346689999
Q ss_pred cEEEeCCCCeEEEEeCCCcEE
Q 011537 257 EIIFVPSGWYHQVHNLEDTIS 277 (483)
Q Consensus 257 DiLFVPsGWwHqV~nledsIS 277 (483)
|+++||.|+.|...+-++.+.
T Consensus 376 DVfvvP~g~~h~~~ag~e~~~ 396 (465)
T 3qac_A 376 QLVVVPQNFAIVKQAFEDGFE 396 (465)
T ss_dssp CEEEECTTCEEEEEEEEEEEE
T ss_pred eEEEECCCcEEEEEcCCCCeE
Confidence 999999999998876544333
No 44
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=91.22 E-value=0.34 Score=40.55 Aligned_cols=61 Identities=13% Similarity=0.155 Sum_probs=43.9
Q ss_pred CCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCCcEEEe
Q 011537 182 KGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQNEIIFV 261 (483)
Q Consensus 182 ~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pGDiLFV 261 (483)
+|..++.|.....-+ ..++.|+=.+.+ + .-...++|||+++|
T Consensus 50 pg~~~~~H~H~~~e~--~~vl~G~~~~~~----------------------~--------------~~~~~l~~Gd~~~i 91 (126)
T 4e2g_A 50 PNTEMPAHEHPHEQA--GVMLEGTLELTI----------------------G--------------EETRVLRPGMAYTI 91 (126)
T ss_dssp TTCEEEEECCSSEEE--EEEEEECEEEEE----------------------T--------------TEEEEECTTEEEEE
T ss_pred CCCcCCCccCCCceE--EEEEEeEEEEEE----------------------C--------------CEEEEeCCCCEEEE
Confidence 455567887765444 777888755443 0 01468999999999
Q ss_pred CCCCeEEEEeCCC-cEEEee
Q 011537 262 PSGWYHQVHNLED-TISINH 280 (483)
Q Consensus 262 PsGWwHqV~nled-sISIn~ 280 (483)
|+|=.|.+.|.++ +..+..
T Consensus 92 p~~~~H~~~~~~~~~~~l~v 111 (126)
T 4e2g_A 92 PGGVRHRARTFEDGCLVLDI 111 (126)
T ss_dssp CTTCCEEEECCTTCEEEEEE
T ss_pred CCCCcEEeEECCCCEEEEEE
Confidence 9999999999988 555544
No 45
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=91.07 E-value=0.39 Score=49.70 Aligned_cols=71 Identities=8% Similarity=0.087 Sum_probs=52.7
Q ss_pred EecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCCc
Q 011537 178 YMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQNE 257 (483)
Q Consensus 178 ~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pGD 257 (483)
-+.| |+..++|+.+. +..|..++.|+=+..++.|.... ++ ...+.+...+++||
T Consensus 245 ~l~p-G~~~~PH~h~~-A~Ei~yVl~G~g~v~vv~~~~~~---------------~~---------~g~~~~~~~l~~GD 298 (397)
T 2phl_A 245 EMEE-GALFVPHYYSK-AIVILVVNEGEAHVELVGPKGNK---------------ET---------LEYESYRAELSKDD 298 (397)
T ss_dssp EECT-TEEEEEEEESS-CEEEEEEEESEEEEEEEEECC-----------------CC---------SCEEEEEEEEETTC
T ss_pred EEcC-CcEeeeeEcCC-CCEEEEEEeeeEEEEEEeccccc---------------cC---------CCceEEEEEecCCC
Confidence 3444 56788898874 46789999999999888764221 00 01245688999999
Q ss_pred EEEeCCCCeEEEEeCCC
Q 011537 258 IIFVPSGWYHQVHNLED 274 (483)
Q Consensus 258 iLFVPsGWwHqV~nled 274 (483)
+++||.|+.|...|.++
T Consensus 299 V~vvP~G~~h~~~n~~~ 315 (397)
T 2phl_A 299 VFVIPAAYPVAIKATSN 315 (397)
T ss_dssp EEEECTTCCEEEEESSS
T ss_pred EEEECCCCeEEEEeCCC
Confidence 99999999999999974
No 46
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=91.03 E-value=0.61 Score=38.22 Aligned_cols=31 Identities=16% Similarity=0.212 Sum_probs=26.1
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCcEEEee
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDTISINH 280 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nledsISIn~ 280 (483)
+..++|||++++|+|=.|++.|.+++.-+..
T Consensus 79 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~v 109 (115)
T 1yhf_A 79 TYRVAEGQTIVMPAGIPHALYAVEAFQMLLV 109 (115)
T ss_dssp EEEEETTCEEEECTTSCEEEEESSCEEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEECCCceEEEE
Confidence 4689999999999999999999987544444
No 47
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=90.96 E-value=0.39 Score=49.93 Aligned_cols=79 Identities=10% Similarity=0.106 Sum_probs=53.5
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
+-+.| |+..+.|+.+. +..|..++.|+=+..++.|.-... .+ . +. +. -..++.+.-.+++|
T Consensus 254 ~~l~~-g~~~~pH~h~~-A~Ei~~V~~G~~~v~~v~~~g~~~------~~-~----~~-~~-----~~~~~~~~~~l~~G 314 (416)
T 1uij_A 254 VDINE-GALLLPHFNSK-AIVILVINEGDANIELVGIKEQQQ------KQ-K----QE-EE-----PLEVQRYRAELSED 314 (416)
T ss_dssp EEECT-TEEEEEEEESS-CEEEEEEEESEEEEEEEEEC-----------------------------CCEEEEEEEEETT
T ss_pred EEEcC-CcEecceEcCC-CcEEEEEEeeEEEEEEEcCCCccc------cc-c----cc-cc-----ccceEEEEEEecCC
Confidence 45555 56788999874 467899999999999987753210 00 0 00 00 01124566799999
Q ss_pred cEEEeCCCCeEEEEeCCC
Q 011537 257 EIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 257 DiLFVPsGWwHqV~nled 274 (483)
|+++||.|+.|...|.++
T Consensus 315 dv~vvP~g~~h~~~n~~~ 332 (416)
T 1uij_A 315 DVFVIPAAYPFVVNATSN 332 (416)
T ss_dssp CEEEECTTCCEEEEESSS
T ss_pred cEEEECCCCeEEEEcCCC
Confidence 999999999999999954
No 48
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=90.90 E-value=0.67 Score=41.66 Aligned_cols=24 Identities=13% Similarity=0.257 Sum_probs=22.5
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLE 273 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nle 273 (483)
+..++|||++|||+|-.|++.|.+
T Consensus 95 ~~~l~~Gd~i~ip~~~~H~~~n~~ 118 (167)
T 3ibm_A 95 VEPLTPLDCVYIAPHAWHQIHATG 118 (167)
T ss_dssp EEEECTTCEEEECTTCCEEEEEES
T ss_pred EEEECCCCEEEECCCCcEEEEeCC
Confidence 578999999999999999999987
No 49
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=90.90 E-value=0.5 Score=48.36 Aligned_cols=32 Identities=13% Similarity=0.040 Sum_probs=28.2
Q ss_pred EEEEEeCCcEEEeCCCCeEEEEeCCCcEEEee
Q 011537 249 LECTQEQNEIIFVPSGWYHQVHNLEDTISINH 280 (483)
Q Consensus 249 ~e~vq~pGDiLFVPsGWwHqV~nledsISIn~ 280 (483)
-++..++||+++||++.||+..|.++++-+.+
T Consensus 317 ~~~~w~~gD~fvvP~w~~h~~~n~~~a~Lf~~ 348 (368)
T 3nw4_A 317 ETTKLEKGDMFVVPSWVPWSLQAETQFDLFRF 348 (368)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESSSEEEEEE
T ss_pred EEEEecCCCEEEECCCCcEEEEeCCCEEEEEE
Confidence 36899999999999999999999988776665
No 50
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=90.89 E-value=0.3 Score=51.07 Aligned_cols=63 Identities=13% Similarity=0.016 Sum_probs=47.4
Q ss_pred EEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeC
Q 011537 176 FVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQ 255 (483)
Q Consensus 176 ~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~p 255 (483)
.+-+.|. +..+.| ..+..-|..++.|+=+..++.|.. .....+++
T Consensus 65 ~~~l~PG-g~~~pH--h~~a~Ei~yVl~G~g~v~~v~~~~--------------------------------~~~~~l~~ 109 (434)
T 2ea7_A 65 EFKSKPN-TLLLPH--HADADFLLVVLNGTAVLTLVNPDS--------------------------------RDSYILEQ 109 (434)
T ss_dssp EEEECTT-EEEEEE--EESEEEEEEEEESEEEEEEECSSC--------------------------------EEEEEEET
T ss_pred EEEecCC-cCccCc--cCCCceEEEEEecEEEEEEEeCCC--------------------------------CEEEEeCC
Confidence 4566764 456777 335566799999998877765421 12468999
Q ss_pred CcEEEeCCCCeEEEEeCC
Q 011537 256 NEIIFVPSGWYHQVHNLE 273 (483)
Q Consensus 256 GDiLFVPsGWwHqV~nle 273 (483)
||+++||+|..|.+.|.+
T Consensus 110 GDv~~iP~G~~H~~~N~g 127 (434)
T 2ea7_A 110 GHAQKIPAGTTFFLVNPD 127 (434)
T ss_dssp TEEEEECTTCEEEEEECC
T ss_pred CCEEEECCCccEEEEeCC
Confidence 999999999999999996
No 51
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=90.85 E-value=1.2 Score=40.78 Aligned_cols=72 Identities=8% Similarity=-0.032 Sum_probs=47.2
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEe--
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQE-- 254 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~-- 254 (483)
+....+|+.-.+|+... .--....++|+=..+++.-. ..-|.|. ++..++|.
T Consensus 57 ~s~s~~GvlRG~H~h~~-q~klv~~v~G~v~dv~vD~R-----------------------~~SpTfg--~~~~v~Ls~~ 110 (174)
T 3ejk_A 57 FSEVLPRRVKAWKRHSL-MTQLFAVPVGCIHVVLYDGR-----------------------EKSPTSG--RLAQVTLGRP 110 (174)
T ss_dssp EEEECBTCEEEEEEESS-CCEEEEEEESEEEEEEECCC-----------------------TTCTTTT--CEEEEEEETT
T ss_pred EEECCCCCEECcEecCC-CceEEEEEeeEEEEEEEeCC-----------------------CCCCCCC--eEEEEEECCc
Confidence 34456788888898653 22225566676555554321 1223333 35677777
Q ss_pred -CCcEEEeCCCCeEEEEeCCC
Q 011537 255 -QNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 255 -pGDiLFVPsGWwHqV~nled 274 (483)
++..||||+|+||...++++
T Consensus 111 ~n~~~L~IP~G~aHgf~~lsd 131 (174)
T 3ejk_A 111 DNYRLLRIPPQVWYGFAATGD 131 (174)
T ss_dssp TBCEEEEECTTCEEEEEECTT
T ss_pred cCceEEEeCCCcEEEEEEccC
Confidence 77899999999999999987
No 52
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=90.78 E-value=0.23 Score=51.69 Aligned_cols=63 Identities=8% Similarity=-0.053 Sum_probs=47.6
Q ss_pred EEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeC
Q 011537 176 FVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQ 255 (483)
Q Consensus 176 ~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~p 255 (483)
.+.+-|.+ ..+.|+ ....-|..++.|+=+..++.|+. ..+..+++
T Consensus 53 ~~~l~PGg-~~~pHh--~~a~E~~yVl~G~g~v~~v~~~~--------------------------------~~~~~l~~ 97 (416)
T 1uij_A 53 QFQSKPNT-ILLPHH--ADADFLLFVLSGRAILTLVNNDD--------------------------------RDSYNLHP 97 (416)
T ss_dssp EEEECTTE-EEEEEE--ESEEEEEEEEESCEEEEEECSSC--------------------------------EEEEEECT
T ss_pred EEEeccCc-Cccccc--CCCceEEEEEeeEEEEEEEECCC--------------------------------CeEEEecC
Confidence 46677755 667772 35566799999998887765521 12468999
Q ss_pred CcEEEeCCCCeEEEEeCC
Q 011537 256 NEIIFVPSGWYHQVHNLE 273 (483)
Q Consensus 256 GDiLFVPsGWwHqV~nle 273 (483)
||+++||+|..|.+.|.+
T Consensus 98 GDv~~iP~G~~H~~~N~g 115 (416)
T 1uij_A 98 GDAQRIPAGTTYYLVNPH 115 (416)
T ss_dssp TEEEEECTTCEEEEEECC
T ss_pred CCEEEECCCCeEEEEecC
Confidence 999999999999999984
No 53
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=90.70 E-value=0.63 Score=43.77 Aligned_cols=78 Identities=21% Similarity=0.201 Sum_probs=51.1
Q ss_pred EEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeC
Q 011537 176 FVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQ 255 (483)
Q Consensus 176 ~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~p 255 (483)
+++.=++|+.|+.|-... ..+..++.|.=+=.+|...... ... ...-+.++.|
T Consensus 82 ~~l~w~PGq~spiHdH~~--~~~~~VL~G~l~e~~y~~~~~g---------~~l----------------~~~~~~~l~~ 134 (208)
T 2gm6_A 82 VSFVWGPGQRTPIHDHTV--WGLIGMLRGAEYSQPFVLDGSG---------RPV----------------LHGEPTRLEP 134 (208)
T ss_dssp EEEEECTTCBCCSBCCSS--CEEEEEEESCEEEEEEEECTTS---------CEE----------------ECSCCEEECT
T ss_pred EEEEeCCCcccCcccCCc--ceEEEEecccEEEEEeecCCCC---------ccc----------------cccceEEeCC
Confidence 344446788999996653 6678899998665544321100 000 0011578999
Q ss_pred CcEEEeCC--CCeEEEEeC-CC--cEEEee
Q 011537 256 NEIIFVPS--GWYHQVHNL-ED--TISINH 280 (483)
Q Consensus 256 GDiLFVPs--GWwHqV~nl-ed--sISIn~ 280 (483)
||+.++++ |.+|+|.|. ++ +|||..
T Consensus 135 G~v~~~~~~~g~iH~V~N~~~~~~avsLHv 164 (208)
T 2gm6_A 135 GHVEAVSPTVGDIHRVHNAYDDRVSISIHV 164 (208)
T ss_dssp TCEEEEBTTTBCCEEEEESCSSSCEEEEEE
T ss_pred CCEEEECCCCCCeEEeccCCCCCcEEEEEE
Confidence 99999999 999999998 34 666654
No 54
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=90.69 E-value=0.34 Score=50.03 Aligned_cols=26 Identities=19% Similarity=0.364 Sum_probs=23.7
Q ss_pred EEEEeCCcEEEeCCCCeEEEEe-CCCc
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHN-LEDT 275 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~n-leds 275 (483)
++.+++||++++|+|.||...| .++.
T Consensus 163 ~~~~~~GD~i~~P~g~~H~~~N~~gde 189 (394)
T 3bu7_A 163 KVELGANDFVLTPNGTWHEHGILESGT 189 (394)
T ss_dssp EEEECTTCEEEECTTCCEEEEECTTCC
T ss_pred EEEEcCCCEEEECcCCCEEEEcCCCCC
Confidence 6899999999999999999999 7653
No 55
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=90.27 E-value=0.58 Score=39.72 Aligned_cols=56 Identities=18% Similarity=0.128 Sum_probs=39.2
Q ss_pred CCCCCCcccccC-CCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCCcEEE
Q 011537 182 KGSWTPLHADVF-RSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQNEIIF 260 (483)
Q Consensus 182 ~gs~T~lH~D~~-~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pGDiLF 260 (483)
++...++|.... .-+ ..++.|+=++.+- + .-...++|||+++
T Consensus 52 ~g~~~~~H~H~~~~E~--~~vl~G~~~~~~~----------------------~-------------~~~~~l~~Gd~~~ 94 (134)
T 2o8q_A 52 KEAKPTWHTHTVGFQL--FYVLRGWVEFEYE----------------------D-------------IGAVMLEAGGSAF 94 (134)
T ss_dssp ----CCCEEECCSCEE--EEEEESEEEEEET----------------------T-------------TEEEEEETTCEEE
T ss_pred CCCCCCCEECCCCcEE--EEEEeCEEEEEEC----------------------C-------------cEEEEecCCCEEE
Confidence 456678898764 444 7888888665430 0 0256899999999
Q ss_pred eCCCCeEEEEeCCC
Q 011537 261 VPSGWYHQVHNLED 274 (483)
Q Consensus 261 VPsGWwHqV~nled 274 (483)
||+|-.|...|.++
T Consensus 95 ip~g~~H~~~~~~~ 108 (134)
T 2o8q_A 95 QPPGVRHRELRHSD 108 (134)
T ss_dssp CCTTCCEEEEEECT
T ss_pred ECCCCcEEeEeCCC
Confidence 99999999999654
No 56
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=90.15 E-value=0.7 Score=40.83 Aligned_cols=64 Identities=28% Similarity=0.266 Sum_probs=44.6
Q ss_pred CCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCCcEEE
Q 011537 181 AKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQNEIIF 260 (483)
Q Consensus 181 p~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pGDiLF 260 (483)
++|+.++.|.....-+ ..++.|+=...+-.++. .++ ...-+..++|||+++
T Consensus 49 ~pg~~~~~H~H~~~E~--~~Vl~G~~~~~~~~~~~-----------------------~~~----~~~~~~~l~~Gd~i~ 99 (163)
T 1lr5_A 49 SPGQRTPIHRHSCEEV--FTVLKGKGTLLMGSSSL-----------------------KYP----GQPQEIPFFQNTTFS 99 (163)
T ss_dssp CTTCBCCEEEESSCEE--EEEEECCEEEEECCSSS-----------------------SSC----CSCEEEEECTTEEEE
T ss_pred CCCCcCCCeECCCCeE--EEEEeCEEEEEECCccc-----------------------ccc----CccEEEEeCCCCEEE
Confidence 3455678898865554 88888887666532210 000 112467999999999
Q ss_pred eCCCCeEEEEeCC
Q 011537 261 VPSGWYHQVHNLE 273 (483)
Q Consensus 261 VPsGWwHqV~nle 273 (483)
||+|-.|++.|.+
T Consensus 100 ip~~~~H~~~n~~ 112 (163)
T 1lr5_A 100 IPVNDPHQVWNSD 112 (163)
T ss_dssp ECTTCCEEEECCC
T ss_pred ECCCCcEEeEeCC
Confidence 9999999999987
No 57
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=90.15 E-value=0.68 Score=41.32 Aligned_cols=25 Identities=20% Similarity=0.393 Sum_probs=23.0
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
+.+++|||++|||+|-+|++.|.++
T Consensus 83 ~~~l~~Gd~i~ip~~~~H~~~n~g~ 107 (156)
T 3kgz_A 83 ISDVAQGDLVFIPPMTWHQFRANRG 107 (156)
T ss_dssp EEEEETTCEEEECTTCCEEEECCSS
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCC
Confidence 5689999999999999999999876
No 58
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=90.04 E-value=0.81 Score=37.62 Aligned_cols=31 Identities=10% Similarity=0.162 Sum_probs=25.8
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCcEEEee
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDTISINH 280 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nledsISIn~ 280 (483)
...++|||++++|+|=.|.+.|.+++.-+..
T Consensus 77 ~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~i 107 (114)
T 2ozj_A 77 KIDLVPEDVLMVPAHKIHAIAGKGRFKMLQI 107 (114)
T ss_dssp EEEECTTCEEEECTTCCBEEEEEEEEEEEEE
T ss_pred EEEecCCCEEEECCCCcEEEEeCCCcEEEEE
Confidence 4689999999999999999999876554444
No 59
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=89.89 E-value=0.37 Score=50.35 Aligned_cols=78 Identities=10% Similarity=0.082 Sum_probs=54.2
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
+-+.| |+..++|+.+.. ..|..++.|+=+..++.|.-... . . .+.. -..++.+.-.+++|
T Consensus 271 v~l~p-G~m~~pH~hp~A-~Ei~~V~~G~~~v~vv~~~g~~~---~---~-----~~~~-------~~~~r~~~~~l~~G 330 (434)
T 2ea7_A 271 VDMKE-GALLLPHYSSKA-IVIMVINEGEAKIELVGLSDQQQ---Q---K-----QQEE-------SLEVQRYRAELSED 330 (434)
T ss_dssp EEECT-TEEEEEEEESSC-EEEEEEEESCEEEEEEEEEECCC---C---T-----TSCC-------CEEEEEEEEEECTT
T ss_pred EEEcC-CeeeccEEcCCC-CEEEEEEeeEEEEEEEecCcccc---c---c-----cccc-------CcceEEEEEEecCC
Confidence 45665 556789998754 67899999999999987742110 0 0 0000 00123566699999
Q ss_pred cEEEeCCCCeEEEEeCCC
Q 011537 257 EIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 257 DiLFVPsGWwHqV~nled 274 (483)
|+++||.|+.|...|.++
T Consensus 331 dv~vvP~g~~h~~~n~~~ 348 (434)
T 2ea7_A 331 DVFVIPAAYPVAINATSN 348 (434)
T ss_dssp CEEEECTTCCEEEEESSS
T ss_pred cEEEECCCCeEEEEcCCC
Confidence 999999999999999965
No 60
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=89.82 E-value=1.6 Score=39.89 Aligned_cols=73 Identities=15% Similarity=0.231 Sum_probs=53.4
Q ss_pred CCccEEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEE
Q 011537 172 SDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLEC 251 (483)
Q Consensus 172 ~dyr~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~ 251 (483)
.++.-+.+|++++.+.+|+++..-. ..|+.|.=...+-. +.+.-.+
T Consensus 34 ~~~~V~~v~Gpn~r~d~H~h~~dE~--FyvlkG~m~i~v~d--------------------------------~g~~~~v 79 (174)
T 1yfu_A 34 SDFIVTVVGGPNHRTDYHDDPLEEF--FYQLRGNAYLNLWV--------------------------------DGRRERA 79 (174)
T ss_dssp CSEEEEEECSCBCCCCEEECSSCEE--EEEEESCEEEEEEE--------------------------------TTEEEEE
T ss_pred CcEEEEEEcCCCcCccCcCCCCceE--EEEEeeEEEEEEEc--------------------------------CCceeeE
Confidence 3455678899999999998866655 99999875443321 0113468
Q ss_pred EEeCCcEEEeCCCCeEEEEeCC-CcEEE
Q 011537 252 TQEQNEIIFVPSGWYHQVHNLE-DTISI 278 (483)
Q Consensus 252 vq~pGDiLFVPsGWwHqV~nle-dsISI 278 (483)
++++||+..||+|=-|.-...+ +++.+
T Consensus 80 ~l~eGE~f~lP~gvpH~P~r~~~e~~~l 107 (174)
T 1yfu_A 80 DLKEGDIFLLPPHVRHSPQRPEAGSACL 107 (174)
T ss_dssp EECTTCEEEECTTCCEEEEBCCTTCEEE
T ss_pred EECCCCEEEeCCCCCcCccccCCCCEEE
Confidence 9999999999999999986665 55444
No 61
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=89.67 E-value=0.37 Score=38.21 Aligned_cols=25 Identities=28% Similarity=0.314 Sum_probs=22.8
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
...++|||++++|+|-.|.+.|.++
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~~~~~~~ 92 (105)
T 1v70_A 68 EALLAPGMAAFAPAGAPHGVRNESA 92 (105)
T ss_dssp EEEECTTCEEEECTTSCEEEECCSS
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCC
Confidence 4689999999999999999999865
No 62
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=89.65 E-value=0.34 Score=40.18 Aligned_cols=26 Identities=19% Similarity=0.328 Sum_probs=23.2
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCc
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDT 275 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nleds 275 (483)
..+++|||++++|+|..|...|.++.
T Consensus 69 ~~~l~~GD~i~ip~g~~H~~~n~~~~ 94 (101)
T 1o5u_A 69 KYVIEKGDLVTFPKGLRCRWKVLEPV 94 (101)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEEE
T ss_pred EEEECCCCEEEECCCCcEEEEeCCCe
Confidence 46899999999999999999997653
No 63
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=89.51 E-value=0.45 Score=48.23 Aligned_cols=65 Identities=17% Similarity=0.319 Sum_probs=47.5
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
+.+.| |...+.|+.. ..-|..++.|+=++.+.... .+.....+++|
T Consensus 84 ~~l~p-g~~~~~H~H~--~~E~~~Vl~G~~~~~~~~~~-------------------------------g~~~~~~l~~G 129 (385)
T 1j58_A 84 MRLKP-GAIRELHWHK--EAEWAYMIYGSARVTIVDEK-------------------------------GRSFIDDVGEG 129 (385)
T ss_dssp EEECT-TCEEEEEEES--SCEEEEEEEEEEEEEEECTT-------------------------------SCEEEEEEETT
T ss_pred EEECC-CCCCCCccCC--hheEEEEEeeeEEEEEEeCC-------------------------------CcEEEEEeCCC
Confidence 45555 4467789877 34569999999877765421 11234589999
Q ss_pred cEEEeCCCCeEEEEeCCCc
Q 011537 257 EIIFVPSGWYHQVHNLEDT 275 (483)
Q Consensus 257 DiLFVPsGWwHqV~nleds 275 (483)
|+++||+|.+|...|.++.
T Consensus 130 D~~~ip~g~~H~~~n~~~~ 148 (385)
T 1j58_A 130 DLWYFPSGLPHSIQALEEG 148 (385)
T ss_dssp EEEEECTTCCEEEEEEEEE
T ss_pred CEEEECCCCeEEEEECCCC
Confidence 9999999999999998753
No 64
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=89.27 E-value=2 Score=39.37 Aligned_cols=76 Identities=12% Similarity=0.227 Sum_probs=56.0
Q ss_pred CccEEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEE
Q 011537 173 DYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECT 252 (483)
Q Consensus 173 dyr~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~v 252 (483)
++.-+++|++++.+.+|+|+..-. ..|+.|.=...+-..+ + + ..+...+.
T Consensus 34 ~~~V~~vgGPn~r~D~H~~~~eE~--Fy~lkG~m~l~v~d~g---------------------~----~---~~~~~dv~ 83 (176)
T 1zvf_A 34 GFTVMIVGGPNERTDYHINPTPEW--FYQKKGSMLLKVVDET---------------------D----A---EPKFIDII 83 (176)
T ss_dssp SEEEEEECSSBCCSCEEECSSCEE--EEEEESCEEEEEEECS---------------------S----S---SCEEEEEE
T ss_pred CEEEEEEcCCCcCCcCcCCCCceE--EEEEeCEEEEEEEcCC---------------------C----c---ccceeeEE
Confidence 566678999899999998876655 9999998554443210 0 0 01345799
Q ss_pred EeCCcEEEeCCCCeEEEEeCCCcEEE
Q 011537 253 QEQNEIIFVPSGWYHQVHNLEDTISI 278 (483)
Q Consensus 253 q~pGDiLFVPsGWwHqV~nledsISI 278 (483)
+++||+..+|+|=-|.-...++|+.+
T Consensus 84 i~eGdmfllP~gvpHsP~r~~e~v~l 109 (176)
T 1zvf_A 84 INEGDSYLLPGNVPHSPVRFADTVGI 109 (176)
T ss_dssp ECTTEEEEECTTCCEEEEECTTCEEE
T ss_pred ECCCCEEEcCCCCCcCCcccCCcEEE
Confidence 99999999999999998666766665
No 65
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=89.26 E-value=0.66 Score=48.61 Aligned_cols=76 Identities=14% Similarity=0.088 Sum_probs=52.6
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
+-+.| |+..+.|+.+.. ..|..++.|+=+..++.|..... . +. .-...+.+..++++|
T Consensus 286 v~l~p-g~m~~PH~hp~A-~ei~~V~~G~~~v~vv~~~~~~~-------~------~~-------~g~~~~~~~~~l~~G 343 (445)
T 2cav_A 286 LQMNE-GALFVPHYNSRA-TVILVANEGRAEVELVGLEQQQQ-------Q------GL-------ESMQLRRYAATLSEG 343 (445)
T ss_dssp EEECT-TEEEEEEEESSC-EEEEEEEESCEEEEEEEC-------------------------------CCEEEEEEECTT
T ss_pred EEeeC-CceeeeEECCCC-cEEEEEEeeEEEEEEEeCCCccc-------c------cc-------cCcceEEEEeEecCC
Confidence 34454 556788998854 67899999999999988752210 0 00 001123578899999
Q ss_pred cEEEeCCCCeEEEEeCCC
Q 011537 257 EIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 257 DiLFVPsGWwHqV~nled 274 (483)
|+++||.|+.|...|.++
T Consensus 344 dV~vvP~g~~h~~~n~~~ 361 (445)
T 2cav_A 344 DIIVIPSSFPVALKAASD 361 (445)
T ss_dssp CEEEECTTCCEEEEESSS
T ss_pred cEEEEcCCcEEEEEcCCC
Confidence 999999999999999954
No 66
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=89.22 E-value=0.3 Score=39.45 Aligned_cols=25 Identities=24% Similarity=0.202 Sum_probs=23.2
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
+.+++|||++++|+|-.|.+.|..+
T Consensus 60 ~~~l~~Gd~~~~p~~~~H~~~N~g~ 84 (97)
T 2fqp_A 60 TSQLTRGVSYTRPEGVEHNVINPSD 84 (97)
T ss_dssp EEEECTTCCEEECTTCEEEEECCSS
T ss_pred EEEEcCCCEEEeCCCCcccCEeCCC
Confidence 5789999999999999999999875
No 67
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=89.20 E-value=0.49 Score=41.27 Aligned_cols=62 Identities=16% Similarity=0.144 Sum_probs=42.1
Q ss_pred CCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCCcEEEe
Q 011537 182 KGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQNEIIFV 261 (483)
Q Consensus 182 ~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pGDiLFV 261 (483)
+|..++.|..... --+..++.|+=.+.+-.- . ...+++..++|||+++|
T Consensus 52 pg~~~~~H~H~~~-~E~~~Vl~G~~~~~i~~~-------------------------~-----~~~~~~~~l~~Gd~i~i 100 (148)
T 2oa2_A 52 VGEDIGLEIHPHL-DQFLRVEEGRGLVQMGHR-------------------------Q-----DNLHFQEEVFDDYAILI 100 (148)
T ss_dssp TTCBCCCBCCTTC-EEEEEEEESEEEEEEESB-------------------------T-----TBCCEEEEEETTCEEEE
T ss_pred CCCccCceECCCC-cEEEEEEeCEEEEEECCc-------------------------c-----ccceeeEEECCCCEEEE
Confidence 3556678876522 133778888866654110 0 00134689999999999
Q ss_pred CCCCeEEEEeCCC
Q 011537 262 PSGWYHQVHNLED 274 (483)
Q Consensus 262 PsGWwHqV~nled 274 (483)
|+|-.|.+.|.++
T Consensus 101 p~g~~H~~~n~~~ 113 (148)
T 2oa2_A 101 PAGTWHNVRNTGN 113 (148)
T ss_dssp CTTCEEEEEECSS
T ss_pred CCCCcEEEEECCC
Confidence 9999999999865
No 68
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=89.14 E-value=0.34 Score=40.56 Aligned_cols=26 Identities=15% Similarity=0.138 Sum_probs=23.5
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCc
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDT 275 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nleds 275 (483)
+..++|||++++|+|-.|.+.|.++.
T Consensus 80 ~~~l~~Gd~~~i~~~~~H~~~n~~~~ 105 (125)
T 3h8u_A 80 VTHLKAGDIAIAKPGQVHGAMNSGPE 105 (125)
T ss_dssp EEEEETTEEEEECTTCCCEEEECSSS
T ss_pred EEEeCCCCEEEECCCCEEEeEeCCCC
Confidence 57899999999999999999998664
No 69
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=88.89 E-value=0.52 Score=38.70 Aligned_cols=31 Identities=19% Similarity=0.133 Sum_probs=26.9
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCcEEEee
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDTISINH 280 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nledsISIn~ 280 (483)
+.+++|||++++|+|-.|.+.|.+++..+..
T Consensus 73 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l~v 103 (116)
T 2pfw_A 73 IKVLTAGDSFFVPPHVDHGAVCPTGGILIDT 103 (116)
T ss_dssp EEEECTTCEEEECTTCCEEEEESSCEEEEEE
T ss_pred EEEeCCCCEEEECcCCceeeEeCCCcEEEEE
Confidence 4689999999999999999999987665554
No 70
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=88.88 E-value=0.3 Score=38.98 Aligned_cols=29 Identities=21% Similarity=0.307 Sum_probs=24.4
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCcEEE
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDTISI 278 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nledsISI 278 (483)
...++|||+++||+|-.|.+.|.+++..+
T Consensus 69 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l 97 (102)
T 3d82_A 69 NITLQAGEMYVIPKGVEHKPMAKEECKIM 97 (102)
T ss_dssp EEEEETTEEEEECTTCCBEEEEEEEEEEE
T ss_pred EEEEcCCCEEEECCCCeEeeEcCCCCEEE
Confidence 46899999999999999999998654433
No 71
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=88.78 E-value=1 Score=41.33 Aligned_cols=85 Identities=13% Similarity=0.107 Sum_probs=51.3
Q ss_pred EEecCCCCCCCcccccC------CCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEE
Q 011537 177 VYMGAKGSWTPLHADVF------RSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLE 250 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~------~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e 250 (483)
+++- +|..+|+|+.+. ..=.|. ++.|.=+.++ ++.... .. . .-+.+. ....++ ..-+
T Consensus 58 l~l~-pGQ~~P~H~H~~~~~~~gK~E~~i-vr~G~v~l~~--~g~~~~--~~---~--v~v~dg-~~~~~~-----a~~~ 120 (175)
T 2y0o_A 58 LVLF-PGQTCPEHRHPPVDGQEGKQETFR-CRYGKVYLYV--EGEKTP--LP---K--VLPPQE-DREHYT-----VWHE 120 (175)
T ss_dssp EEEC-TTCEEEEEECCCCTTSCCCCEEEE-EEEEEEEEEE--SSSCCS--SC---S--CCCCGG-GGGGCC-----CCEE
T ss_pred EEEC-CCCcCCceECCCCCCCCCCceeEE-EecCEEEEEE--CCcccc--Cc---c--eeccCC-ceeeec-----CCcE
Confidence 4444 488999999998 544456 6678744433 332211 00 0 000111 112222 3568
Q ss_pred EEEeCCcEEEeCCCCeEEEEeCCCcEEE
Q 011537 251 CTQEQNEIIFVPSGWYHQVHNLEDTISI 278 (483)
Q Consensus 251 ~vq~pGDiLFVPsGWwHqV~nledsISI 278 (483)
++++|||.+.||+|-||...+.++++-|
T Consensus 121 i~L~pGesvtIppg~~H~f~ageegvli 148 (175)
T 2y0o_A 121 IELEPGGQYTIPPNTKHWFQAGEEGAVV 148 (175)
T ss_dssp EEECTTCEEEECTTCCEEEEEEEEEEEE
T ss_pred EEECCCCEEEECCCCcEEEEeCCCCEEE
Confidence 9999999999999999999995554433
No 72
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=88.16 E-value=0.44 Score=42.73 Aligned_cols=31 Identities=23% Similarity=0.265 Sum_probs=25.9
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCcEEEee
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDTISINH 280 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nledsISIn~ 280 (483)
..+++|||++|||+|..|...|.+++..+..
T Consensus 103 ~~~l~~GD~i~iP~G~~h~~~n~~~a~~l~V 133 (151)
T 4axo_A 103 KVSASSGELIFIPKGSKIQFSVPDYARFIYV 133 (151)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEEEEEEEE
T ss_pred EEEEcCCCEEEECCCCEEEEEeCCCEEEEEE
Confidence 5799999999999999999999866544444
No 73
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=88.07 E-value=0.74 Score=46.61 Aligned_cols=26 Identities=23% Similarity=0.339 Sum_probs=23.4
Q ss_pred EEEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 249 LECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 249 ~e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
-+..+++||+++||+|.+|.+.|.++
T Consensus 301 ~~~~l~~GD~~~ip~~~~H~~~n~~~ 326 (385)
T 1j58_A 301 RTFNYQAGDVGYVPFAMGHYVENIGD 326 (385)
T ss_dssp EEEEEESSCEEEECTTCBEEEEECSS
T ss_pred EEEEEcCCCEEEECCCCeEEEEECCC
Confidence 35789999999999999999999865
No 74
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=87.99 E-value=0.7 Score=41.72 Aligned_cols=25 Identities=16% Similarity=0.288 Sum_probs=23.0
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
+..++|||+++||+|=+|++.|..+
T Consensus 92 ~~~l~~GD~i~ip~g~~H~~~n~~~ 116 (166)
T 3jzv_A 92 VSAVAPYDLVTIPGWSWHQFRAPAD 116 (166)
T ss_dssp EEEECTTCEEEECTTCCEEEECCTT
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCC
Confidence 5799999999999999999999765
No 75
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=87.95 E-value=1.5 Score=36.56 Aligned_cols=25 Identities=20% Similarity=0.355 Sum_probs=22.7
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
+..++|||+++||+|=.|++.|.++
T Consensus 73 ~~~l~~Gd~~~i~~~~~H~~~~~~~ 97 (128)
T 4i4a_A 73 DFPVTKGDLIIIPLDSEHHVINNNQ 97 (128)
T ss_dssp EEEEETTCEEEECTTCCEEEEECSS
T ss_pred EEEECCCcEEEECCCCcEEeEeCCC
Confidence 5789999999999999999999754
No 76
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=87.92 E-value=2.1 Score=37.26 Aligned_cols=63 Identities=16% Similarity=0.212 Sum_probs=47.1
Q ss_pred CCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCCcEEEeCCCCeEEEEeCC
Q 011537 194 RSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQNEIIFVPSGWYHQVHNLE 273 (483)
Q Consensus 194 ~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pGDiLFVPsGWwHqV~nle 273 (483)
++.+-+.+++|+=+++++...... ...-++...+|+..+||++-||.|..+.
T Consensus 38 Gtwg~l~VL~G~L~f~~~~e~g~~----------------------------~~~~~~l~~~~~~~~i~Pq~wH~Ve~ls 89 (127)
T 3bb6_A 38 GVYPRLSVMHGAVKYLGYADEHSA----------------------------EPDQVILIEAGQFAVFPPEKWHNIEAMT 89 (127)
T ss_dssp TEEEEEEEEESEEEEEEESSTTCS----------------------------SCSEEEEEEBTBEEECCSSCEEEEEESS
T ss_pred CEEEEEEEEEeEEEEEEECCCCCc----------------------------ceeEEEEeCCCCceEECCCCcEEEEEcC
Confidence 455668899999888775432110 0113578899999999999999999998
Q ss_pred CcEEEeeecCC
Q 011537 274 DTISINHNWFN 284 (483)
Q Consensus 274 dsISIn~Nf~~ 284 (483)
+.+.++.+|..
T Consensus 90 dd~~f~leFyc 100 (127)
T 3bb6_A 90 DDTYFNIDFFV 100 (127)
T ss_dssp TTCEEEEEEEE
T ss_pred CCEEEEEEEEe
Confidence 88888887654
No 77
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=87.67 E-value=1.7 Score=38.19 Aligned_cols=25 Identities=12% Similarity=0.134 Sum_probs=22.6
Q ss_pred EEEEeCCcEEEeCCC-CeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSG-WYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsG-WwHqV~nled 274 (483)
+..++|||+++||+| -.|.+.|..+
T Consensus 87 ~~~l~~Gd~i~i~~~~~~H~~~n~~~ 112 (162)
T 3l2h_A 87 QYPIAPGDFVGFPCHAAAHSISNDGT 112 (162)
T ss_dssp EEEECTTCEEEECTTSCCEEEECCSS
T ss_pred EEEeCCCCEEEECCCCceEEeEeCCC
Confidence 578999999999998 9999999765
No 78
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=87.64 E-value=0.52 Score=38.12 Aligned_cols=25 Identities=20% Similarity=0.335 Sum_probs=22.8
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
...++|||+++||+|-.|...|.++
T Consensus 63 ~~~l~~Gd~~~i~~~~~H~~~~~~~ 87 (113)
T 2gu9_A 63 TQALQAGSLIAIERGQAHEIRNTGD 87 (113)
T ss_dssp EEEECTTEEEEECTTCCEEEECCSS
T ss_pred EEEeCCCCEEEECCCCcEEeEcCCC
Confidence 4689999999999999999999865
No 79
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=87.11 E-value=1.4 Score=43.35 Aligned_cols=72 Identities=15% Similarity=0.054 Sum_probs=47.8
Q ss_pred CCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCCcEEE
Q 011537 181 AKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQNEIIF 260 (483)
Q Consensus 181 p~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pGDiLF 260 (483)
++|+..++|.... ..-|..++.|+=++.+ . .-...+++||+++
T Consensus 54 ~pg~~~~~h~H~~-~~e~~~Vl~G~~~~~~-~-----------------------------------~~~~~l~~Gd~~~ 96 (337)
T 1y3t_A 54 GKGDAFPLHVHKD-THEGILVLDGKLELTL-D-----------------------------------GERYLLISGDYAN 96 (337)
T ss_dssp CTTCEEEEEECTT-CCEEEEEEESCEEEEE-T-----------------------------------TEEEEECTTCEEE
T ss_pred CCCCCCCceeCCC-ceEEEEEEECEEEEEE-C-----------------------------------CEEEEECCCCEEE
Confidence 4456677887752 3344888888866553 0 0146899999999
Q ss_pred eCCCCeEEEEeCCCcEEEeeecCCCCChHH
Q 011537 261 VPSGWYHQVHNLEDTISINHNWFNGYNLSW 290 (483)
Q Consensus 261 VPsGWwHqV~nledsISIn~Nf~~~~nl~~ 290 (483)
+|+|-+|...|.++... -...+.+..+..
T Consensus 97 ~p~~~~H~~~n~~~~~~-~~~~~~p~~~~~ 125 (337)
T 1y3t_A 97 IPAGTPHSYRMQSHRTR-LVSYTMKGNVAH 125 (337)
T ss_dssp ECTTCCEEEEECSTTEE-EEEEEETTSSTH
T ss_pred ECCCCcEEEEECCCCeE-EEEEECCCCHHH
Confidence 99999999999977432 233344444443
No 80
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=87.05 E-value=0.83 Score=43.85 Aligned_cols=29 Identities=21% Similarity=0.366 Sum_probs=25.6
Q ss_pred eeEEEEEeCCcEEEeCCCCeEEEEeCCCc
Q 011537 247 LWLECTQEQNEIIFVPSGWYHQVHNLEDT 275 (483)
Q Consensus 247 ~~~e~vq~pGDiLFVPsGWwHqV~nleds 275 (483)
......++|||++|||+|-.|...|.++.
T Consensus 100 ~~~~~~l~~GD~i~iP~g~~H~~~N~~~~ 128 (239)
T 2xlg_A 100 DLYSIQSEPKQLIYSPNHYMHGFVNPTDK 128 (239)
T ss_dssp EEEEEECCTTEEEEECTTEEEEEECCSSS
T ss_pred ceeEEEECCCCEEEECCCCCEEEEeCCCC
Confidence 34578999999999999999999998764
No 81
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=86.98 E-value=0.62 Score=37.62 Aligned_cols=27 Identities=15% Similarity=0.204 Sum_probs=24.3
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCcE
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDTI 276 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nledsI 276 (483)
+..++|||++++|+|-.|.+.|.+++.
T Consensus 75 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~ 101 (110)
T 2q30_A 75 VIPAPRGAVLVAPISTPHGVRAVTDMK 101 (110)
T ss_dssp EEEECTTEEEEEETTSCEEEEESSSEE
T ss_pred EEEECCCCEEEeCCCCcEEEEEcCCcE
Confidence 468999999999999999999998754
No 82
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=86.56 E-value=0.73 Score=48.32 Aligned_cols=62 Identities=13% Similarity=0.049 Sum_probs=46.7
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
+-+-| |+..+.| ....--|..++.|+=+..++.|+. ..+..+++|
T Consensus 91 ~~l~P-gg~~~pH--h~~a~E~~yVl~G~g~v~~v~~~~--------------------------------~~~~~l~~G 135 (445)
T 2cav_A 91 YCSKP-NTLLLPH--HSDSDLLVLVLEGQAILVLVNPDG--------------------------------RDTYKLDQG 135 (445)
T ss_dssp EEECS-SEEEEEE--EESSEEEEEEEESEEEEEEEETTE--------------------------------EEEEEEETT
T ss_pred EEECC-CcCccCc--CCCCceEEEEEeCEEEEEEEeCCC--------------------------------CEEEEecCC
Confidence 45666 4456777 235566799999998887765431 125689999
Q ss_pred cEEEeCCCCeEEEEeCC
Q 011537 257 EIIFVPSGWYHQVHNLE 273 (483)
Q Consensus 257 DiLFVPsGWwHqV~nle 273 (483)
|++++|+|--|.+.|.+
T Consensus 136 Dv~~~P~G~~H~~~N~g 152 (445)
T 2cav_A 136 DAIKIQAGTPFYLINPD 152 (445)
T ss_dssp EEEEECTTCCEEEEECC
T ss_pred CEEEECCCCcEEEEECC
Confidence 99999999999999996
No 83
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=86.16 E-value=0.83 Score=38.08 Aligned_cols=24 Identities=17% Similarity=0.236 Sum_probs=22.3
Q ss_pred EEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 251 CTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 251 ~vq~pGDiLFVPsGWwHqV~nled 274 (483)
..++|||++|||+|=-|.+.|.++
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~~ 98 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTDG 98 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEECS
T ss_pred EEECCCCEEEECCCCcEEEEeCCC
Confidence 589999999999999999999874
No 84
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=86.03 E-value=0.58 Score=47.45 Aligned_cols=26 Identities=19% Similarity=0.345 Sum_probs=23.6
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCc
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDT 275 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nleds 275 (483)
++.+++||+++||+|.+|+..|.++.
T Consensus 140 ~~~l~~GD~~~iP~g~~H~~~n~~~~ 165 (354)
T 2d40_A 140 RTPMNEGDFILTPQWRWHDHGNPGDE 165 (354)
T ss_dssp EEECCTTCEEEECTTSCEEEECCSSS
T ss_pred EEEEcCCCEEEECCCCcEEeEeCCCC
Confidence 57999999999999999999998653
No 85
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=86.03 E-value=2.1 Score=41.96 Aligned_cols=39 Identities=10% Similarity=0.044 Sum_probs=28.7
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCCChH
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLS 289 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~nl~ 289 (483)
+..+++||+++||++-.|...|.++...+ ...+++..+.
T Consensus 258 ~~~l~~GD~~~ip~~~~H~~~n~~~~~~~-l~v~~~~~~~ 296 (337)
T 1y3t_A 258 EIQLNPGDFLHVPANTVHSYRLDSHYTKM-VGVLVPGLFE 296 (337)
T ss_dssp EEEECTTCEEEECTTCCEEEEECSSSEEE-EEEEESSTTT
T ss_pred EEEECCCCEEEECCCCeEEEEECCCCeEE-EEEEcCccHH
Confidence 57999999999999999999999763332 2234444443
No 86
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=85.92 E-value=2.8 Score=37.84 Aligned_cols=25 Identities=16% Similarity=0.110 Sum_probs=22.8
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeC-CC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNL-ED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nl-ed 274 (483)
+.+++|||++|+|++-.|.+.|. ++
T Consensus 163 ~~~l~~GD~~~~~~~~~H~~~n~~~~ 188 (198)
T 2bnm_A 163 EALLPTGASMFVEEHVPHAFTAAKGT 188 (198)
T ss_dssp EEEECTTCEEEECTTCCEEEEESTTS
T ss_pred cEEECCCCEEEeCCCCceEEEecCCC
Confidence 57999999999999999999998 54
No 87
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=85.83 E-value=0.99 Score=37.26 Aligned_cols=56 Identities=18% Similarity=0.261 Sum_probs=40.4
Q ss_pred CCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEE-EEeCCcEEE
Q 011537 182 KGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLEC-TQEQNEIIF 260 (483)
Q Consensus 182 ~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~-vq~pGDiLF 260 (483)
+|..++.|.....-+ ...+.|+=++.+ . + . .. .++|||+++
T Consensus 36 pg~~~~~H~H~~~e~--~~Vl~G~~~~~i----------~------------~-----------~---~~~~l~~Gd~i~ 77 (117)
T 2b8m_A 36 RGEQMPKHYSNSYVH--LIIIKGEMTLTL----------E------------D-----------Q---EPHNYKEGNIVY 77 (117)
T ss_dssp TTCBCCCEECSSCEE--EEEEESEEEEEE----------T------------T-----------S---CCEEEETTCEEE
T ss_pred CCCcCCCEeCCCcEE--EEEEeCEEEEEE----------C------------C-----------E---EEEEeCCCCEEE
Confidence 355567887654444 778888866543 0 0 0 13 899999999
Q ss_pred eCCCCeEEEEeCCCc
Q 011537 261 VPSGWYHQVHNLEDT 275 (483)
Q Consensus 261 VPsGWwHqV~nleds 275 (483)
||+|-.|.+.|.+++
T Consensus 78 ip~~~~H~~~~~~~~ 92 (117)
T 2b8m_A 78 VPFNVKMLIQNINSD 92 (117)
T ss_dssp ECTTCEEEEECCSSS
T ss_pred ECCCCcEEeEcCCCC
Confidence 999999999998764
No 88
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=85.37 E-value=2 Score=40.08 Aligned_cols=39 Identities=21% Similarity=0.228 Sum_probs=30.3
Q ss_pred CCCCCCceeEEEEEeCCcEEEeCCCCeEEEEeCCCcEEEee
Q 011537 240 FPGFKKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINH 280 (483)
Q Consensus 240 fP~~~~a~~~e~vq~pGDiLFVPsGWwHqV~nledsISIn~ 280 (483)
-|.|. ++..++|.++-.||||+|.||...++++...+.+
T Consensus 102 SpTfg--~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~a~~~y 140 (197)
T 1nxm_A 102 GETFG--NTYQTVIDASKSIFVPRGVANGFQVLSDFVAYSY 140 (197)
T ss_dssp STTTT--CEEEEEECTTEEEEECTTEEEEEEECSSEEEEEE
T ss_pred CCCCC--eEEEEEeCCCcEEEeCCCeEEEEEeccCCeEEEE
Confidence 34443 4567888899999999999999999988544443
No 89
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=85.32 E-value=2.3 Score=37.89 Aligned_cols=25 Identities=28% Similarity=0.255 Sum_probs=23.0
Q ss_pred EEEEeCCcEEEeCCC--CeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSG--WYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsG--WwHqV~nled 274 (483)
+.++++||+++||+| -.|++.|..+
T Consensus 84 ~~~l~~GD~i~ip~~~~~~H~~~n~~~ 110 (163)
T 3i7d_A 84 EHPMVPGDCAAFPAGDPNGHQFVNRTD 110 (163)
T ss_dssp EEEECTTCEEEECTTCCCCBEEECCSS
T ss_pred EEEeCCCCEEEECCCCCcceEEEECCC
Confidence 579999999999999 9999999865
No 90
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=85.29 E-value=2 Score=39.73 Aligned_cols=37 Identities=22% Similarity=0.390 Sum_probs=27.8
Q ss_pred eeEEEEEeC--CcEEEeCCCCeEEEEeCCCcEEEeeecCC
Q 011537 247 LWLECTQEQ--NEIIFVPSGWYHQVHNLEDTISINHNWFN 284 (483)
Q Consensus 247 ~~~e~vq~p--GDiLFVPsGWwHqV~nledsISIn~Nf~~ 284 (483)
++..++|.+ +..||||+|+||...++++. ++-..+++
T Consensus 98 ~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~~s 136 (185)
T 1ep0_A 98 EWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVNYKCT 136 (185)
T ss_dssp CEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEEES
T ss_pred eEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEEecC
Confidence 355667765 69999999999999999986 44443444
No 91
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=84.95 E-value=2.1 Score=39.49 Aligned_cols=37 Identities=14% Similarity=0.242 Sum_probs=27.6
Q ss_pred eeEEEEEeC--CcEEEeCCCCeEEEEeCCCcEEEeeecCC
Q 011537 247 LWLECTQEQ--NEIIFVPSGWYHQVHNLEDTISINHNWFN 284 (483)
Q Consensus 247 ~~~e~vq~p--GDiLFVPsGWwHqV~nledsISIn~Nf~~ 284 (483)
++..++|.+ +..||||+|+||...++++. ++-..+++
T Consensus 99 ~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~~s 137 (184)
T 2ixk_A 99 QWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLYKTT 137 (184)
T ss_dssp CEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEEES
T ss_pred eEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEEeCC
Confidence 355667765 69999999999999999986 44443444
No 92
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=84.91 E-value=3.9 Score=41.10 Aligned_cols=40 Identities=8% Similarity=-0.115 Sum_probs=29.4
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCcEEEeeecCCCCChHH
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSW 290 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nledsISIn~Nf~~~~nl~~ 290 (483)
+.+++|||++++|+|-.|...|.++.- .-...+.+..+..
T Consensus 95 ~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l~v~~p~~~~~ 134 (350)
T 1juh_A 95 TRVLSSGDYGSVPRNVTHTFQIQDPDT-EMTGVIVPGGFED 134 (350)
T ss_dssp EEEEETTCEEEECTTEEEEEEECSTTE-EEEEEEESSCTTH
T ss_pred EEEECCCCEEEECCCCcEEEEeCCCCC-EEEEEEcCccHHH
Confidence 578999999999999999999997653 2233344444443
No 93
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=84.78 E-value=0.81 Score=38.96 Aligned_cols=25 Identities=24% Similarity=0.229 Sum_probs=23.1
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
+.+++|||+++||+|-.|.+.|.++
T Consensus 80 ~~~l~~Gd~~~ip~~~~H~~~~~~~ 104 (145)
T 3ht1_A 80 TEEVGPGEAIFIPRGEPHGFVTGPG 104 (145)
T ss_dssp EEEECTTCEEEECTTCCBEEECCTT
T ss_pred EEEECCCCEEEECCCCeEEeEcCCC
Confidence 5789999999999999999999865
No 94
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=84.77 E-value=9.7 Score=37.37 Aligned_cols=75 Identities=13% Similarity=0.209 Sum_probs=57.6
Q ss_pred CCccEEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEE
Q 011537 172 SDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLEC 251 (483)
Q Consensus 172 ~dyr~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~ 251 (483)
.++.-+.+|+.++.+.+|+|...-+ +.|+.|.=+..+... .+...+
T Consensus 30 ~~~~V~~vgGpN~R~d~H~~~~dE~--FyqlkG~m~l~~~d~--------------------------------g~~~~V 75 (286)
T 2qnk_A 30 EQLKVMFIGGPNTRKDYHIEEGEEV--FYQLEGDMVLRVLEQ--------------------------------GKHRDV 75 (286)
T ss_dssp SSEEEEEECSCBCCCCEEECSSCEE--EEEEESCEEEEEEET--------------------------------TEEEEE
T ss_pred ccEEEEEEeCCCcCccCcCCCCCeE--EEEEeCeEEEEEEeC--------------------------------CceeeE
Confidence 3556678999999999998765555 999999865444210 123468
Q ss_pred EEeCCcEEEeCCCCeEEEEeCCCcEEEee
Q 011537 252 TQEQNEIIFVPSGWYHQVHNLEDTISINH 280 (483)
Q Consensus 252 vq~pGDiLFVPsGWwHqV~nledsISIn~ 280 (483)
.+++||+..+|+|=-|.-...++|+.+=.
T Consensus 76 ~i~eGemfllP~gv~HsP~r~~et~gLvi 104 (286)
T 2qnk_A 76 VIRQGEIFLLPARVPHSPQRFANTVGLVV 104 (286)
T ss_dssp EECTTEEEEECTTCCEEEEECTTCEEEEE
T ss_pred EECCCeEEEeCCCCCcCCcccCCeEEEEE
Confidence 99999999999999999988888777654
No 95
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=84.71 E-value=0.71 Score=37.56 Aligned_cols=27 Identities=19% Similarity=0.223 Sum_probs=23.4
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCcE
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDTI 276 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nledsI 276 (483)
...++|||++++|+|=.|...|.+++.
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~ 94 (107)
T 2i45_A 68 SMTIREGEMAVVPKSVSHRPRSENGCS 94 (107)
T ss_dssp EEEECTTEEEEECTTCCEEEEEEEEEE
T ss_pred EEEECCCCEEEECCCCcEeeEeCCCeE
Confidence 578999999999999999999965543
No 96
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=84.11 E-value=0.8 Score=38.90 Aligned_cols=24 Identities=25% Similarity=0.437 Sum_probs=21.9
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLE 273 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nle 273 (483)
+.+++|||+++||+|-.|...|.+
T Consensus 78 ~~~l~~GD~v~ip~g~~H~~~~~~ 101 (119)
T 3lwc_A 78 TVTAGPGEIVYMPKGETVTIRSHE 101 (119)
T ss_dssp EEEECTTCEEEECTTCEEEEEEEE
T ss_pred EEEECCCCEEEECCCCEEEEEcCC
Confidence 468999999999999999999874
No 97
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=83.20 E-value=1.4 Score=36.92 Aligned_cols=25 Identities=8% Similarity=0.112 Sum_probs=22.7
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
...++|||+++||+|-.|+..|.++
T Consensus 67 ~~~l~~Gd~i~i~~~~~H~~~~~~~ 91 (125)
T 3cew_A 67 KIELQAGDWLRIAPDGKRQISAASD 91 (125)
T ss_dssp EEEEETTEEEEECTTCCEEEEEBTT
T ss_pred EEEeCCCCEEEECCCCcEEEEcCCC
Confidence 4689999999999999999999854
No 98
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=82.89 E-value=2.9 Score=38.54 Aligned_cols=29 Identities=17% Similarity=0.526 Sum_probs=24.3
Q ss_pred eeEEEEEeC--CcEEEeCCCCeEEEEeCCCc
Q 011537 247 LWLECTQEQ--NEIIFVPSGWYHQVHNLEDT 275 (483)
Q Consensus 247 ~~~e~vq~p--GDiLFVPsGWwHqV~nleds 275 (483)
++..++|.+ +..||||+|+||...++++.
T Consensus 98 ~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (183)
T 1dzr_A 98 QWVGVNLSAENKRQLWIPEGFAHGFVTLSEY 128 (183)
T ss_dssp CEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred eEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 455677765 68999999999999999885
No 99
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=82.64 E-value=0.79 Score=39.37 Aligned_cols=28 Identities=7% Similarity=0.120 Sum_probs=24.2
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCcEE
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDTIS 277 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nledsIS 277 (483)
.+.++|||++++|+|.-|...|.++.-.
T Consensus 88 ~~~l~~GD~~~ip~g~~h~~~~~~~~rK 115 (123)
T 3bcw_A 88 VHAVKAGDAFIMPEGYTGRWEVDRHVKK 115 (123)
T ss_dssp EEEEETTCEEEECTTCCCEEEEEEEEEE
T ss_pred EEEECCCCEEEECCCCeEEEEECCceeE
Confidence 4789999999999999999999876433
No 100
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=82.55 E-value=0.49 Score=38.96 Aligned_cols=25 Identities=16% Similarity=0.085 Sum_probs=22.9
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
+..++|||++|+|+|-.|.+.|..+
T Consensus 60 ~~~l~aGd~~~~p~G~~H~~~N~g~ 84 (98)
T 2ozi_A 60 LAQLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp CCCBCTTCCEEECTTCEEEEEECSS
T ss_pred EEEECCCCEEEECCCCceeCEECCC
Confidence 4579999999999999999999876
No 101
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=81.75 E-value=5.6 Score=37.83 Aligned_cols=29 Identities=24% Similarity=0.456 Sum_probs=24.1
Q ss_pred eeEEEEEeC--CcEEEeCCCCeEEEEeCCCc
Q 011537 247 LWLECTQEQ--NEIIFVPSGWYHQVHNLEDT 275 (483)
Q Consensus 247 ~~~e~vq~p--GDiLFVPsGWwHqV~nleds 275 (483)
++..++|.+ +..||||+|+||...++++.
T Consensus 117 ~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 147 (225)
T 1upi_A 117 RWDSVLLDDQDRRTIYVSEGLAHGFLALQDN 147 (225)
T ss_dssp CEEEEEEETTTCCEEEECTTCEEEEEECSSS
T ss_pred cEEEEEecCCCCcEEEeCCCeeEEEEEcCCC
Confidence 355677766 58999999999999999875
No 102
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=81.42 E-value=3.5 Score=38.64 Aligned_cols=62 Identities=11% Similarity=0.045 Sum_probs=46.6
Q ss_pred CCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCCcEEE
Q 011537 181 AKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQNEIIF 260 (483)
Q Consensus 181 p~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pGDiLF 260 (483)
.+|+.-+.|..+..-. ..++.|+=++.+ + .-+.+++|||.++
T Consensus 45 ~~G~~~~~h~h~~~~~--~~Vl~G~~~~~i----------------------~--------------~~~~~l~~Gd~~~ 86 (227)
T 3rns_A 45 AKDEEITAEAMLGNRY--YYCFNGNGEIFI----------------------E--------------NNKKTISNGDFLE 86 (227)
T ss_dssp CTTCEEEECSCSSCEE--EEEEESEEEEEE----------------------S--------------SCEEEEETTEEEE
T ss_pred CCCCccCccccCCCEE--EEEEeCEEEEEE----------------------C--------------CEEEEECCCCEEE
Confidence 3466677787766655 777788766543 0 0146899999999
Q ss_pred eCCCCeEEEEeCCCcEEEee
Q 011537 261 VPSGWYHQVHNLEDTISINH 280 (483)
Q Consensus 261 VPsGWwHqV~nledsISIn~ 280 (483)
+|+|-.|.+.+.+++.-+-.
T Consensus 87 ~p~~~~H~~~a~~~~~~l~i 106 (227)
T 3rns_A 87 ITANHNYSIEARDNLKLIEI 106 (227)
T ss_dssp ECSSCCEEEEESSSEEEEEE
T ss_pred ECCCCCEEEEECCCcEEEEE
Confidence 99999999999998777655
No 103
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=81.30 E-value=1.4 Score=38.25 Aligned_cols=28 Identities=11% Similarity=0.224 Sum_probs=23.4
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCcEE
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDTIS 277 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nledsIS 277 (483)
+.+++|||++|+|+|..|...|.++..-
T Consensus 94 ~~~l~~GD~i~~p~g~~h~~~~~~~~~~ 121 (133)
T 2pyt_A 94 TMIAKAGDVMFIPKGSSIEFGTPTSVRF 121 (133)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEEEEE
T ss_pred EEEECCCcEEEECCCCEEEEEeCCCEEE
Confidence 4689999999999999999998655433
No 104
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=81.21 E-value=1.6 Score=37.23 Aligned_cols=25 Identities=20% Similarity=0.395 Sum_probs=22.9
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
+..++|||++++|+|-.|...|.++
T Consensus 97 ~~~l~~Gd~i~i~~~~~H~~~n~~~ 121 (133)
T 1o4t_A 97 DVPIKAGDVCFTDSGESHSIENTGN 121 (133)
T ss_dssp EEEEETTEEEEECTTCEEEEECCSS
T ss_pred EEEeCCCcEEEECCCCcEEeEECCC
Confidence 5789999999999999999999865
No 105
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=80.97 E-value=5 Score=37.59 Aligned_cols=34 Identities=29% Similarity=0.517 Sum_probs=26.6
Q ss_pred CCCCCCceeEEEEEeC--CcEEEeCCCCeEEEEeCCCc
Q 011537 240 FPGFKKTLWLECTQEQ--NEIIFVPSGWYHQVHNLEDT 275 (483)
Q Consensus 240 fP~~~~a~~~e~vq~p--GDiLFVPsGWwHqV~nleds 275 (483)
-|.|. ++..++|.+ +..||||+|+||...++++.
T Consensus 93 SpTfG--~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (205)
T 1oi6_A 93 SPTFG--QWDSVLMDQQDPRAVYLPVGVGHAFVALEDD 128 (205)
T ss_dssp CTTTT--CEEEEEECSSSCCEEEECTTCEEEEEECSTT
T ss_pred CCCCC--eEEEEEecCCCCCEEEeCCCeeEEEEEccCC
Confidence 34443 456777776 58999999999999999875
No 106
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=80.90 E-value=4.5 Score=37.70 Aligned_cols=34 Identities=24% Similarity=0.571 Sum_probs=26.4
Q ss_pred eeEEEEEeC--CcEEEeCCCCeEEEEeCCCcEEEee
Q 011537 247 LWLECTQEQ--NEIIFVPSGWYHQVHNLEDTISINH 280 (483)
Q Consensus 247 ~~~e~vq~p--GDiLFVPsGWwHqV~nledsISIn~ 280 (483)
++..++|.+ +..||||+|+||...++++...+.+
T Consensus 116 ~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~a~~ly 151 (196)
T 1wlt_A 116 KYVKAELNEENHYMLWIPPGFAHGFQALEDSIVIYF 151 (196)
T ss_dssp CEEEEEEETTTCCEEEECTTEEEEEEESSSEEEEEE
T ss_pred eEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEE
Confidence 355667764 7999999999999999998544433
No 107
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=80.81 E-value=2.8 Score=44.27 Aligned_cols=86 Identities=12% Similarity=-0.021 Sum_probs=51.0
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
+-|.|.| ..+.|+-. ..-|..++.|+=...+.-|+...-.-. ...+.. .. ...+ .+...-....+++|
T Consensus 53 ~~l~Pgg-l~~Ph~~~--a~ei~yV~~G~g~~g~v~pg~~et~~~-~~~~~~----~~-~~~~---~~d~~qk~~~l~~G 120 (476)
T 1fxz_A 53 CTLNRNA-LRRPSYTN--GPQEIYIQQGKGIFGMIYPGCPSTFEE-PQQPQQ----RG-QSSR---PQDRHQKIYNFREG 120 (476)
T ss_dssp EEECTTE-EEEEEEES--SCEEEEEEECCEEEEEECTTCCCC---------------------------CCCCEEEECTT
T ss_pred EEEcCCC-EecceecC--CceEEEEEecEEEEEEEcCCCcchhhc-cccccc----cc-cccc---cccccceEEEEeCC
Confidence 5677754 56666644 335699999999999988875422100 000000 00 0000 01111234689999
Q ss_pred cEEEeCCCCeEEEEeCCC
Q 011537 257 EIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 257 DiLFVPsGWwHqV~nled 274 (483)
|+++||+|-.|..+|.++
T Consensus 121 Dvi~iPaG~~h~~~N~G~ 138 (476)
T 1fxz_A 121 DLIAVPTGVAWWMYNNED 138 (476)
T ss_dssp EEEEECTTCEEEEEECSS
T ss_pred CEEEECCCCcEEEEeCCC
Confidence 999999999999999976
No 108
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=80.74 E-value=3.4 Score=43.52 Aligned_cols=94 Identities=11% Similarity=-0.037 Sum_probs=53.1
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCcccc----ccCCC---CcccCCCCCCceeE
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYN----IFDDV---SETDFPGFKKTLWL 249 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~d----i~d~~---d~~~fP~~~~a~~~ 249 (483)
+-|.|. +..+.|+. .+.-|..++.|+=..-++-|++ +..|.......... .-... ....--.++..+-.
T Consensus 55 ~~i~P~-gl~~Ph~h--~a~ei~yV~qG~g~~g~v~pgc-~etf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqk 130 (465)
T 3qac_A 55 RTIEPH-GLLLPSFT--SAPELIYIEQGNGITGMMIPGC-PETYESGSQQFQGGEDERIREQGSRKFGMRGDRFQDQHQK 130 (465)
T ss_dssp EEECTT-EEEEEEEE--SSCEEEEEEECEEEEEEECTTC-CCCC------------------------------CCCCCC
T ss_pred EEEcCC-cCcccEEc--CCCEEEEEEECcEEEEEecCCC-Cceeecchhccccccccccccccccccccccccccccccc
Confidence 556664 45677776 4555699999999999988864 23331100000000 00000 00000011222333
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
...+++||+++||+|--|..+|.++
T Consensus 131 ~~~~~~GDvi~iPaG~~hw~~N~G~ 155 (465)
T 3qac_A 131 IRHLREGDIFAMPAGVSHWAYNNGD 155 (465)
T ss_dssp EEEEETTEEEEECTTCEEEEECCSS
T ss_pred eeeecCCCEEEECCCCeEEEEcCCC
Confidence 5789999999999999999999876
No 109
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=80.32 E-value=2 Score=40.64 Aligned_cols=25 Identities=20% Similarity=0.145 Sum_probs=23.1
Q ss_pred EEEEeCCcEEE-eCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIF-VPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLF-VPsGWwHqV~nled 274 (483)
..+++|||.+| ||+|-.|.+.|.++
T Consensus 73 ~~~l~~Gd~i~~ip~~~~H~~~n~~~ 98 (243)
T 3h7j_A 73 TRKMTALESAYIAPPHVPHGARNDTD 98 (243)
T ss_dssp EEEEETTTCEEEECTTCCEEEEECSS
T ss_pred EEEECCCCEEEEcCCCCcEeeEeCCC
Confidence 56899999997 99999999999877
No 110
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=79.36 E-value=4.3 Score=38.41 Aligned_cols=29 Identities=14% Similarity=0.378 Sum_probs=24.1
Q ss_pred eeEEEEEeC--CcEEEeCCCCeEEEEeCCCc
Q 011537 247 LWLECTQEQ--NEIIFVPSGWYHQVHNLEDT 275 (483)
Q Consensus 247 ~~~e~vq~p--GDiLFVPsGWwHqV~nleds 275 (483)
++..++|.+ +..||||.|+||...++++.
T Consensus 106 ~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 136 (216)
T 2c0z_A 106 CWEGTRLDDVSRRAVYLSEGIGHGFCAISDE 136 (216)
T ss_dssp CEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred eEEEEEecCCCCCEEEeCCCeeEEEEEcCCC
Confidence 355677776 58999999999999999885
No 111
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=79.20 E-value=4.5 Score=37.90 Aligned_cols=36 Identities=22% Similarity=0.249 Sum_probs=28.8
Q ss_pred EEEEEeCCcEEEeCCCCeEEEEeC---CCcEEEeeecCC
Q 011537 249 LECTQEQNEIIFVPSGWYHQVHNL---EDTISINHNWFN 284 (483)
Q Consensus 249 ~e~vq~pGDiLFVPsGWwHqV~nl---edsISIn~Nf~~ 284 (483)
..+.-++|++|+.|+.-+|.|..- ++-|||++|...
T Consensus 169 ~~i~P~~G~lvlFpS~l~H~V~p~~~~~~RiSIsFN~~~ 207 (216)
T 2rg4_A 169 RSVAPKVGDVLLWESWLRHEVPMNMAEEDRISVSFNYAW 207 (216)
T ss_dssp EEECCCTTEEEEEETTSCEEECCCCSSSCEEEEEEEEEC
T ss_pred eEecCCCCeEEEECCCCEEeccCCCCCCCEEEEEEEeec
Confidence 477889999999999999999983 356777776554
No 112
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=79.10 E-value=1.9 Score=40.89 Aligned_cols=31 Identities=19% Similarity=0.106 Sum_probs=25.7
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC--cEEEee
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED--TISINH 280 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled--sISIn~ 280 (483)
+.+++|||++++|+|-.|++.|..+ ...+..
T Consensus 185 ~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v 217 (243)
T 3h7j_A 185 TVEMKFGTAYFCEPREDHGAINRSEKESKSINI 217 (243)
T ss_dssp EEEECTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 5689999999999999999999965 444444
No 113
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=79.10 E-value=4 Score=35.43 Aligned_cols=24 Identities=13% Similarity=0.198 Sum_probs=22.2
Q ss_pred EEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 251 CTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 251 ~vq~pGDiLFVPsGWwHqV~nled 274 (483)
..++|||++++|+|=.|...|..+
T Consensus 89 ~~l~~Gd~i~ip~~~~H~~~n~~~ 112 (147)
T 2f4p_A 89 RILKKGDVVEIPPNVVHWHGAAPD 112 (147)
T ss_dssp EEEETTCEEEECTTCCEEEEEBTT
T ss_pred EEECCCCEEEECCCCcEEeEeCCC
Confidence 589999999999999999999865
No 114
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=79.09 E-value=1.5 Score=36.89 Aligned_cols=25 Identities=36% Similarity=0.302 Sum_probs=22.7
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
+..++|||++++|+|-.|...|.++
T Consensus 87 ~~~l~~Gd~i~ip~g~~H~~~~~~~ 111 (126)
T 1vj2_A 87 EETVEEGFYIFVEPNEIHGFRNDTD 111 (126)
T ss_dssp EEEEETTEEEEECTTCCEEEECCSS
T ss_pred EEEECCCCEEEECCCCcEEeEeCCC
Confidence 4689999999999999999999864
No 115
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=79.00 E-value=2.7 Score=44.17 Aligned_cols=85 Identities=12% Similarity=-0.009 Sum_probs=51.9
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
+-|.|. +..+.|+.. ..-|..++.|+=..-++-|+......... .+.. . .... ....+-..-.+++|
T Consensus 68 ~~i~pg-gl~~Ph~h~--a~ei~yVl~G~g~vg~v~p~~~~tf~~~~-~~~~----~--~~~~---~~d~~q~~~~l~~G 134 (459)
T 2e9q_A 68 HTIRPK-GLLLPGFSN--APKLIFVAQGFGIRGIAIPGCAETYQTDL-RRSQ----S--AGSA---FKDQHQKIRPFREG 134 (459)
T ss_dssp EEECTT-EEEEEEEES--SCEEEEEEECEEEEEECCTTCCCCEEECC-C-------------C---CCEEECCCEEEETT
T ss_pred EEEcCC-CEecceecC--CceEEEEEeeEEEEEEEeCCCcchhccch-hhcc----c--cccc---cccccceeEEecCC
Confidence 556664 456677753 44679999999999998776432211100 0000 0 0000 11111123589999
Q ss_pred cEEEeCCCCeEEEEeCCC
Q 011537 257 EIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 257 DiLFVPsGWwHqV~nled 274 (483)
|+++||+|--|..+|.++
T Consensus 135 Dv~~iPaG~~H~~~N~g~ 152 (459)
T 2e9q_A 135 DLLVVPAGVSHWMYNRGQ 152 (459)
T ss_dssp EEEEECTTCCEEEEECSS
T ss_pred CEEEECCCCCEEEEeCCC
Confidence 999999999999999976
No 116
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=78.92 E-value=3.1 Score=38.98 Aligned_cols=27 Identities=19% Similarity=0.203 Sum_probs=24.1
Q ss_pred EEEEeCCcEEEeCCCCeEEEEe-CCCcE
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHN-LEDTI 276 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~n-ledsI 276 (483)
+..++|||++++|+|-.|.+.| .+++-
T Consensus 192 ~~~l~~Gd~i~ip~~~~H~~~~~~~~~~ 219 (227)
T 3rns_A 192 PFIVKKGESAVLPANIPHAVEAETENFK 219 (227)
T ss_dssp EEEEETTEEEEECTTSCEEEECCSSCEE
T ss_pred EEEECCCCEEEECCCCcEEEEeCCCCEE
Confidence 5799999999999999999999 87743
No 117
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=78.23 E-value=2 Score=38.79 Aligned_cols=28 Identities=18% Similarity=-0.021 Sum_probs=24.4
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCcEE
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDTIS 277 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nledsIS 277 (483)
+.+++|||++|+|++=.|...|.++.-+
T Consensus 145 ~~~l~~GD~i~i~~~~~H~~~n~~~~~~ 172 (192)
T 1y9q_A 145 WHELQQGEHIRFFSDQPHGYAAVTEKAV 172 (192)
T ss_dssp EEEECTTCEEEEECSSSEEEEESSSCEE
T ss_pred EEEeCCCCEEEEcCCCCeEeECCCCCcE
Confidence 4699999999999999999999876433
No 118
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=77.79 E-value=5.1 Score=37.91 Aligned_cols=62 Identities=21% Similarity=0.260 Sum_probs=43.3
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
++|+| |+..|.|..+..-+ +.++.|.=.|.+= ++ -..++.||
T Consensus 137 v~l~P-G~~yP~HsHp~EEi--y~VLsG~~e~~v~---------------------~g--------------~~~~l~pG 178 (217)
T 4b29_A 137 GYWGP-GLDYGWHEHLPEEL--YSVVSGRALFHLR---------------------NA--------------PDLMLEPG 178 (217)
T ss_dssp EEECS-SCEEEEEECSSEEE--EEEEEECEEEEET---------------------TS--------------CCEEECTT
T ss_pred EEECC-CCcCCCCCCCCceE--EEEEeCCEEEEEC---------------------CC--------------CEEecCCC
Confidence 34444 45577777776666 7777777666541 00 13689999
Q ss_pred cEEEeCCCCeEEEEeCCCcE
Q 011537 257 EIIFVPSGWYHQVHNLEDTI 276 (483)
Q Consensus 257 DiLFVPsGWwHqV~nledsI 276 (483)
|++|+|+|=-|.+++.++-+
T Consensus 179 d~v~ipsgv~Ha~rt~dePl 198 (217)
T 4b29_A 179 QTRFHPANAPHAMTTLTDPI 198 (217)
T ss_dssp CEEEECTTCCEEEECCSSCE
T ss_pred CEEEcCCCCceeEEECCccE
Confidence 99999999999999876544
No 119
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=77.41 E-value=3.4 Score=43.77 Aligned_cols=89 Identities=12% Similarity=0.040 Sum_probs=51.6
Q ss_pred EEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCC-CcccCCCCCCceeEEEEEe
Q 011537 176 FVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDV-SETDFPGFKKTLWLECTQE 254 (483)
Q Consensus 176 ~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~-d~~~fP~~~~a~~~e~vq~ 254 (483)
.+-|-|.| ....|+-.. .-|..++.|+=..-+.-|++..-.-.....+.. ... .... .....-....++
T Consensus 49 r~~i~pgg-l~~Ph~~~~--~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~----~~~~~~~~---~~d~~qkv~~l~ 118 (493)
T 2d5f_A 49 KRTLNRNG-LHLPSYSPY--PQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSR----RGSRSQQQ---LQDSHQKIRHFN 118 (493)
T ss_dssp EEEECTTE-EEEEEECSS--CEEEEEEECEEEEEECCTTCCCCEEECC--------------------CSEEESCEEEEE
T ss_pred EEEeCCCc-EeCceecCC--CeEEEEEeCEEEEEEEeCCCccccccccccccc----cccccccc---cccccceEEEec
Confidence 45677654 456666543 356999999999999988754321000000000 000 0000 000111133899
Q ss_pred CCcEEEeCCCCeEEEEeCCC
Q 011537 255 QNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 255 pGDiLFVPsGWwHqV~nled 274 (483)
+||+++||+|--|..+|.++
T Consensus 119 ~GDvi~iPaG~~h~~~N~g~ 138 (493)
T 2d5f_A 119 EGDVLVIPPGVPYWTYNTGD 138 (493)
T ss_dssp TTEEEEECTTCCEEEEECSS
T ss_pred CCCEEEECCCCcEEEEeCCC
Confidence 99999999999999999976
No 120
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=76.83 E-value=4.3 Score=42.08 Aligned_cols=63 Identities=16% Similarity=0.164 Sum_probs=45.4
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
+-+-|.|...|-|.| +.....++.|+=...++.|.. .....+++|
T Consensus 49 ~~l~p~gl~~Phh~~---A~ei~yV~~G~g~~g~V~~~~--------------------------------~~~~~l~~G 93 (418)
T 3s7i_A 49 IEAKPNTLVLPKHAD---ADNILVIQQGQATVTVANGNN--------------------------------RKSFNLDEG 93 (418)
T ss_dssp EEECTTEEEEEEEES---EEEEEEEEESEEEEEEECSSC--------------------------------EEEEEEETT
T ss_pred EEecCCceeeeeeCC---CCeEEEEEEeeEEEEEEecCC--------------------------------EEEEEecCC
Confidence 566776655555544 443478889987777766531 124589999
Q ss_pred cEEEeCCCCeEEEEeCCC
Q 011537 257 EIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 257 DiLFVPsGWwHqV~nled 274 (483)
|+++||+|.-|.+.|.++
T Consensus 94 Dv~~~P~G~~h~~~N~g~ 111 (418)
T 3s7i_A 94 HALRIPSGFISYILNRHD 111 (418)
T ss_dssp EEEEECTTCEEEEEECCS
T ss_pred CEEEECCCCeEEEEecCC
Confidence 999999999999999864
No 121
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=76.61 E-value=3.2 Score=38.52 Aligned_cols=55 Identities=18% Similarity=0.301 Sum_probs=39.7
Q ss_pred CcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCCcEEEeCCCCe
Q 011537 187 PLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQNEIIFVPSGWY 266 (483)
Q Consensus 187 ~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pGDiLFVPsGWw 266 (483)
+.|.....-+ ...+.|+=.+.+=.. ...++++.+++||+|+||+|=.
T Consensus 98 ~~H~H~~~Ei--~yVleG~G~f~i~d~-------------------------------~d~~~~i~v~~GDlIiIPaG~~ 144 (191)
T 1vr3_A 98 EEHLHLDEEI--RYILEGSGYFDVRDK-------------------------------EDKWIRISMEKGDMITLPAGIY 144 (191)
T ss_dssp SCEECSSCEE--EEEEEEEEEEEEECT-------------------------------TSCEEEEEEETTEEEEECTTCC
T ss_pred cceECCcceE--EEEEeceEEEEECCC-------------------------------CCeEEEEEECCCCEEEECcCCc
Confidence 5677666555 777888765554110 1135678999999999999999
Q ss_pred EEEEeCCC
Q 011537 267 HQVHNLED 274 (483)
Q Consensus 267 HqV~nled 274 (483)
|...+.++
T Consensus 145 H~f~~~~~ 152 (191)
T 1vr3_A 145 HRFTLDEK 152 (191)
T ss_dssp EEEEECTT
T ss_pred CCcccCCC
Confidence 99888665
No 122
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=76.51 E-value=3.2 Score=37.64 Aligned_cols=29 Identities=7% Similarity=-0.034 Sum_probs=25.3
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCcEEE
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDTISI 278 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nledsISI 278 (483)
+.++.+||.+|+|+|=-|..+|..+.-+.
T Consensus 129 ~~~L~~Gds~~iP~g~~H~~~N~~d~~Ar 157 (166)
T 2vpv_A 129 KFLSVKGSTFQIPAFNEYAIANRGNDEAK 157 (166)
T ss_dssp EEEEETTCEEEECTTCEEEEEECSSSCEE
T ss_pred EEEEcCCCEEEECCCCCEEEEECCCCCEE
Confidence 56999999999999999999999875443
No 123
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=76.00 E-value=8.2 Score=36.17 Aligned_cols=33 Identities=18% Similarity=0.349 Sum_probs=26.3
Q ss_pred eeEEEEEeC--CcEEEeCCCCeEEEEeCCCcEEEe
Q 011537 247 LWLECTQEQ--NEIIFVPSGWYHQVHNLEDTISIN 279 (483)
Q Consensus 247 ~~~e~vq~p--GDiLFVPsGWwHqV~nledsISIn 279 (483)
++..++|.+ +-.||||+|+||...++++.--+.
T Consensus 121 ~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~a~~~ 155 (205)
T 3ryk_A 121 QWRGYILSADNHRQLLVPKGFAHGFCTLVPHTIVM 155 (205)
T ss_dssp CEEEEEEETTTCCEEEECTTEEEEEEECSSSEEEE
T ss_pred eEEEEEecCCCCCEEEeCCCceEEEEEcCCCEEEE
Confidence 456777765 899999999999999998754343
No 124
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=75.84 E-value=3.9 Score=42.46 Aligned_cols=89 Identities=7% Similarity=0.056 Sum_probs=53.6
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCC-CceeEEEEEeC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFK-KTLWLECTQEQ 255 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~-~a~~~e~vq~p 255 (483)
+-+.| |+..+.|+.+.. ..|..++.|+=+.-++.|..... .. .... .+.......-... ..+.+...+++
T Consensus 268 ~~l~p-gg~~~PH~~p~A-~ei~yV~~G~g~v~vv~~~~~~~---~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~ 338 (418)
T 3s7i_A 268 VEIKE-GALMLPHFNSKA-MVIVVVNKGTGNLELVAVRKEQQ---QR-GRRE---EEEDEDEEEEGSNREVRRYTARLKE 338 (418)
T ss_dssp EEECT-TEEEEEEEESSC-EEEEEEEECCEEEEEEEEEEC--------------------------CCEEEEEEEEEECT
T ss_pred EEecC-CceeCceecCCC-CEEEEEEeCeEEEEEEeCCCccc---cc-cccc---cccccccccccccccceEEEeeeCC
Confidence 45666 456788997754 55899999999999987764310 00 0000 0000000000000 11456789999
Q ss_pred CcEEEeCCCCeEEEEeCCC
Q 011537 256 NEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 256 GDiLFVPsGWwHqV~nled 274 (483)
||+++||.|+.|...|-++
T Consensus 339 GDV~vvP~G~~~~~~~~~~ 357 (418)
T 3s7i_A 339 GDVFIMPAAHPVAINASSE 357 (418)
T ss_dssp TCEEEECTTCCEEEEESSC
T ss_pred CCEEEECCCCEEEEECCCC
Confidence 9999999999999999766
No 125
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=73.60 E-value=5.5 Score=41.94 Aligned_cols=24 Identities=13% Similarity=-0.024 Sum_probs=22.2
Q ss_pred EEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 251 CTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 251 ~vq~pGDiLFVPsGWwHqV~nled 274 (483)
-.+++||+++||+|.-|..+|.++
T Consensus 147 ~~l~~GDvi~iPaG~~~~~~N~g~ 170 (466)
T 3kgl_A 147 EHIRTGDTIATHPGVAQWFYNDGN 170 (466)
T ss_dssp EEEETTEEEEECTTCEEEEECCSS
T ss_pred ccccCCCEEEECCCCcEEEEeCCC
Confidence 388999999999999999999975
No 126
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=72.16 E-value=21 Score=33.25 Aligned_cols=38 Identities=18% Similarity=0.403 Sum_probs=28.6
Q ss_pred CCCCCceeEEEEEeC--CcEEEeCCCCeEEEEeCCCcEEEee
Q 011537 241 PGFKKTLWLECTQEQ--NEIIFVPSGWYHQVHNLEDTISINH 280 (483)
Q Consensus 241 P~~~~a~~~e~vq~p--GDiLFVPsGWwHqV~nledsISIn~ 280 (483)
|.|. ++..++|.+ +-.||||.|.+|...++++...+.+
T Consensus 91 pTfG--~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~~Y 130 (201)
T 4hn1_A 91 PTFG--RWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATLVF 130 (201)
T ss_dssp TTTT--CEEEEEEETTTCCEEEECTTCEEEEEECSTTEEEEE
T ss_pred CCCC--eEEEEEecCCCCCEEEeCCcceEEEeecCCCeEEEE
Confidence 4444 455666665 8999999999999999988555443
No 127
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=71.66 E-value=16 Score=31.29 Aligned_cols=63 Identities=13% Similarity=0.263 Sum_probs=45.5
Q ss_pred CCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCCcEEEeCCCCeEEEEeCC
Q 011537 194 RSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQNEIIFVPSGWYHQVHNLE 273 (483)
Q Consensus 194 ~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pGDiLFVPsGWwHqV~nle 273 (483)
++.+...++.|+=+++.+.-.... ...-+++..+|+.-+||+.-||.|. +.
T Consensus 37 GtWgkL~Vl~G~Lkf~~~~e~~~~----------------------------~~~~~~~~~~~~~~~i~Pq~wHrVe-~s 87 (119)
T 3dl3_A 37 DVFGQICVMEGVVTYYGFANSEAT----------------------------EPEIKVVINAGQFATSPPQYWHRIE-LS 87 (119)
T ss_dssp TEEEEEEEEESEEEEEEESSTTCC----------------------------SCSEEEEEETTEEEEECTTCEEEEE-EC
T ss_pred cEEEEEEEEEeEEEEEEEcCCCCC----------------------------cccEEEEeCCCCCceeCCCceEEEE-EC
Confidence 344568899999988876532210 0113578999999999999999999 77
Q ss_pred CcEEEeeecCCC
Q 011537 274 DTISINHNWFNG 285 (483)
Q Consensus 274 dsISIn~Nf~~~ 285 (483)
+-+.++.+|...
T Consensus 88 dD~~f~leFyc~ 99 (119)
T 3dl3_A 88 DDAQFNINFWSD 99 (119)
T ss_dssp TTCEEEEEEEEC
T ss_pred CCeEEEEEEEEC
Confidence 777777765544
No 128
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=70.92 E-value=2 Score=39.39 Aligned_cols=28 Identities=21% Similarity=0.173 Sum_probs=24.1
Q ss_pred eeEEEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 247 LWLECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 247 ~~~e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
..+.+.+++||+|+||+|=+|...+.++
T Consensus 120 ~~~~~~l~~GDli~IP~g~~H~~~~~~~ 147 (179)
T 1zrr_A 120 EVFQVLCEKNDLISVPAHTPHWFDMGSE 147 (179)
T ss_dssp CEEEEECCCSCEEEECTTCCBCCCCSSC
T ss_pred EEEEEEECCCCEEEECCCCeEeeecCCC
Confidence 3567889999999999999999887665
No 129
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=69.39 E-value=10 Score=36.37 Aligned_cols=25 Identities=12% Similarity=0.069 Sum_probs=23.0
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
+..++|||++++|++-.|...|.++
T Consensus 222 ~~~l~~GD~i~i~~~~~H~~~n~~~ 246 (274)
T 1sef_A 222 WYPVEKGDYIFMSAYVPQAAYAVGR 246 (274)
T ss_dssp EEEEETTCEEEECTTCCEEEEEECS
T ss_pred EEEECCCCEEEECCCCCEEEEeCCC
Confidence 5789999999999999999999865
No 130
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=68.03 E-value=4 Score=41.01 Aligned_cols=26 Identities=12% Similarity=0.171 Sum_probs=23.8
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCc
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDT 275 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nleds 275 (483)
+.++++||++|||+|-.|++.+.++.
T Consensus 292 ~~~l~~Gd~~~iPag~~h~~~~~~~~ 317 (350)
T 1juh_A 292 ATELGSGDVAFIPGGVEFKYYSEAYF 317 (350)
T ss_dssp CEEECTTCEEEECTTCCEEEEESSSS
T ss_pred EEEeCCCCEEEECCCCCEEEEecCCe
Confidence 56999999999999999999998774
No 131
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=67.66 E-value=3.7 Score=39.16 Aligned_cols=25 Identities=8% Similarity=-0.001 Sum_probs=21.9
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
+..++|||++|+|++-.|...|.++
T Consensus 219 ~~~l~~GD~i~~~~~~~H~~~n~g~ 243 (261)
T 1rc6_A 219 WIPVKKGDYIFMGAYSLQAGYGVGR 243 (261)
T ss_dssp EEEEETTCEEEECSSEEEEEEEC--
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCC
Confidence 5789999999999999999999865
No 132
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=67.62 E-value=4.3 Score=43.19 Aligned_cols=94 Identities=11% Similarity=0.019 Sum_probs=51.6
Q ss_pred EEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCcc-c------cccCCCCcccCCCCCCcee
Q 011537 176 FVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCV-Y------NIFDDVSETDFPGFKKTLW 248 (483)
Q Consensus 176 ~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~-~------di~d~~d~~~fP~~~~a~~ 248 (483)
.+-|.|.| ....|+-. ..-|..++.|+=..-+.-|+...-.-.....+.. . .. ++-+.. ...+...-
T Consensus 52 r~~i~p~g-l~lPh~~~--a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~d~~q 125 (510)
T 3c3v_A 52 RLVLRRNA-LRRPFYSN--APQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRL-QEEDQS--QQQQDSHQ 125 (510)
T ss_dssp EEEECTTE-EEEEEECS--SCEEEEEEECCEEEEEECTTCCCCEEEECCC-----------------------CEEEEES
T ss_pred EEEECCCC-CccceecC--CCeEEEEEeCEEEEEEEeCCCccccccccccccccccccccccc-cccccc--cccccccc
Confidence 35677755 45566644 3346999999999999888753210000000000 0 00 000000 00001111
Q ss_pred EEEEEeCCcEEEeCCCCeEEEEeCCCc
Q 011537 249 LECTQEQNEIIFVPSGWYHQVHNLEDT 275 (483)
Q Consensus 249 ~e~vq~pGDiLFVPsGWwHqV~nleds 275 (483)
....+++||+++||+|--|..+|.+++
T Consensus 126 kv~~v~~GDvi~iPaG~~hw~~N~g~~ 152 (510)
T 3c3v_A 126 KVHRFNEGDLIAVPTGVAFWLYNDHDT 152 (510)
T ss_dssp CCEEECTTEEEEECTTCEEEEEECSSS
T ss_pred eEEEecCCCEEEECCCCCEEEEeCCCC
Confidence 235899999999999999999999863
No 133
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=66.29 E-value=6.8 Score=40.34 Aligned_cols=63 Identities=10% Similarity=-0.021 Sum_probs=47.3
Q ss_pred EEEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeC
Q 011537 176 FVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQ 255 (483)
Q Consensus 176 ~l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~p 255 (483)
.+-+.|.|. .+.|+- ....|..++.|+=+..++.|... .+..+++
T Consensus 56 ~~~l~pgg~-~~ph~~--~a~ei~yVl~G~~~v~~v~~~~~--------------------------------~~~~l~~ 100 (397)
T 2phl_A 56 EFRSKPETL-LLPQQA--DAELLLVVRSGSAILVLVKPDDR--------------------------------REYFFLT 100 (397)
T ss_dssp EEEECSSEE-EEEEEE--SEEEEEEEEESEEEEEEEETTTE--------------------------------EEEEEEE
T ss_pred EEEECCCcC-ccCEec--CCCeEEEEEeeeEEEEEEeCCCc--------------------------------EEEEECC
Confidence 456777554 455553 45578999999988887765310 1358999
Q ss_pred CcE------EEeCCCCeEEEEeCC
Q 011537 256 NEI------IFVPSGWYHQVHNLE 273 (483)
Q Consensus 256 GDi------LFVPsGWwHqV~nle 273 (483)
||+ ++||+|-.|...|.+
T Consensus 101 GDv~~~~~~~~iP~G~~h~~~N~g 124 (397)
T 2phl_A 101 SDNPIFSDHQKIPAGTIFYLVNPD 124 (397)
T ss_dssp SSCTTSCSEEEECTTCEEEEEECC
T ss_pred CCcccccceEEECCCCcEEEEeCC
Confidence 999 999999999999987
No 134
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=65.28 E-value=4.2 Score=39.51 Aligned_cols=25 Identities=20% Similarity=0.270 Sum_probs=23.1
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
+.+++|||++|+|+|-.|+..|..+
T Consensus 109 ~~~L~~GD~i~ip~~~~H~~~N~g~ 133 (278)
T 1sq4_A 109 VHAMQPGGYAFIPPGADYKVRNTTG 133 (278)
T ss_dssp EEEECTTEEEEECTTCCEEEECCSS
T ss_pred EEEECCCCEEEECCCCcEEEEECCC
Confidence 5699999999999999999999865
No 135
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=64.68 E-value=23 Score=31.00 Aligned_cols=66 Identities=12% Similarity=0.098 Sum_probs=44.3
Q ss_pred CCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEe-CCcEE
Q 011537 181 AKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQE-QNEII 259 (483)
Q Consensus 181 p~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~-pGDiL 259 (483)
++|+.-++|.... ..-+.+.++|+=++.|...... -+++|. |--.|
T Consensus 43 ~~g~~RG~H~Hk~-~~q~li~l~Gs~~v~ldDg~~~--------------------------------~~~~L~~~~~gL 89 (141)
T 2pa7_A 43 KGEEPRGFHAHKK-LEQVLVCLNGSCRVILDDGNII--------------------------------QEITLDSPAVGL 89 (141)
T ss_dssp CSSCCEEEEEESS-CCEEEEEEESCEEEEEECSSCE--------------------------------EEEEECCTTEEE
T ss_pred CCCCEECcCcCCC-ceEEEEEEccEEEEEEECCcEE--------------------------------EEEEECCCCcEE
Confidence 3778788887753 3356888899988888332110 123343 33469
Q ss_pred EeCCCCeEEEEeCCC-cEEEe
Q 011537 260 FVPSGWYHQVHNLED-TISIN 279 (483)
Q Consensus 260 FVPsGWwHqV~nled-sISIn 279 (483)
+||+|-||.+.++++ ||-+.
T Consensus 90 ~IppgvWh~~~~~s~~avllv 110 (141)
T 2pa7_A 90 YVGPAVWHEMHDFSSDCVMMV 110 (141)
T ss_dssp EECTTCEEEEECCCTTCEEEE
T ss_pred EeCCCEEEEEEEcCCCeEEEE
Confidence 999999999999976 44443
No 136
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=63.44 E-value=13 Score=39.39 Aligned_cols=85 Identities=12% Similarity=0.040 Sum_probs=48.4
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccccCCCCcccCCCCCCceeEEEEEeCC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQN 256 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di~d~~d~~~fP~~~~a~~~e~vq~pG 256 (483)
+-|.|.| ..+.|+-...-+ ..++.|+=..-++-|+... .|....... ... ..+ +....-..-.+++|
T Consensus 51 ~~i~pgg-l~lPh~~~A~ei--~~V~qG~g~~G~v~p~~~e-~f~~~~~~~-----~~~-~~~---~~d~~qk~~~l~~G 117 (496)
T 3ksc_A 51 ATLQRNA-LRRPYYSNAPQE--IFIQQGNGYFGMVFPGCPE-TFEEPQESE-----QGE-GRR---YRDRHQKVNRFREG 117 (496)
T ss_dssp EEECTTE-EEEEEEESSCEE--EEEEECCEEEEEECTTCCC-C------------------------CCCCCCEEEECTT
T ss_pred EEecCCC-EeCceEcCCCEE--EEEEeCceEEEEEeCCCCc-cchhhhhcc-----ccc-ccc---cccchheeeccCCC
Confidence 5566654 455555533334 7889999999998886432 221000000 000 001 11111112389999
Q ss_pred cEEEeCCCCeEEEEeCCC
Q 011537 257 EIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 257 DiLFVPsGWwHqV~nled 274 (483)
|++.||+|-.|..+|.++
T Consensus 118 DV~viPaG~~h~~~N~G~ 135 (496)
T 3ksc_A 118 DIIAVPTGIVFWMYNDQD 135 (496)
T ss_dssp EEEEECTTCEEEEEECSS
T ss_pred CEEEECCCCcEEEEcCCC
Confidence 999999999999999875
No 137
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=60.78 E-value=6.3 Score=37.37 Aligned_cols=26 Identities=12% Similarity=0.060 Sum_probs=23.6
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCc
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDT 275 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nleds 275 (483)
...++|||++|++++--|+.+|..+.
T Consensus 205 ~~~l~~GD~~~~~~~~pH~~~n~g~~ 230 (246)
T 1sfn_A 205 YYPVTAGDIIWMGAHCPQWYGALGRN 230 (246)
T ss_dssp EEEEETTCEEEECTTCCEEEEEESSS
T ss_pred EEEcCCCCEEEECCCCCEEEEcCCCC
Confidence 46899999999999999999998764
No 138
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=60.53 E-value=4.5 Score=36.36 Aligned_cols=22 Identities=14% Similarity=0.086 Sum_probs=20.2
Q ss_pred EEEEeCCcEEEeCCCCeEEEEe
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHN 271 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~n 271 (483)
...++|||+++||+|=.|++.+
T Consensus 87 ~~~l~~GD~v~IPpg~~H~i~g 108 (157)
T 4h7l_A 87 SYPLTKLLAISIPPLVRHRIVG 108 (157)
T ss_dssp EEECCTTEEEEECTTCCEEEES
T ss_pred EEEeCCCCEEEECCCCeEeeEC
Confidence 4689999999999999999985
No 139
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=60.11 E-value=6.4 Score=37.52 Aligned_cols=25 Identities=12% Similarity=0.254 Sum_probs=23.2
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
+.+++|||++|+|++--|...|..+
T Consensus 100 ~~~L~~Gd~~~~~~~~~H~~~N~~~ 124 (261)
T 1rc6_A 100 TFALSEGGYLYCPPGSLMTFVNAQA 124 (261)
T ss_dssp EEEEETTEEEEECTTCCCEEEECSS
T ss_pred EEEECCCCEEEECCCCCEEEEeCCC
Confidence 5699999999999999999999965
No 140
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=58.00 E-value=7.5 Score=37.85 Aligned_cols=25 Identities=8% Similarity=0.009 Sum_probs=22.9
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
...+++||++|+|++--|+..|.++
T Consensus 226 ~~~V~~GD~i~~~~~~~h~~~n~G~ 250 (266)
T 4e2q_A 226 WYPVQAGDVIWMAPFVPQWYAALGK 250 (266)
T ss_dssp EEEEETTCEEEECTTCCEEEEEESS
T ss_pred EEEecCCCEEEECCCCcEEEEeCCC
Confidence 5689999999999999999999865
No 141
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=57.79 E-value=7.4 Score=37.43 Aligned_cols=26 Identities=8% Similarity=0.077 Sum_probs=23.6
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCc
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDT 275 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nleds 275 (483)
+.+|+|||.+|+|++--|...|..+.
T Consensus 103 ~~~L~~GD~~~~~~~~~H~~~N~~~~ 128 (274)
T 1sef_A 103 THELEAGGYAYFTPEMKMYLANAQEA 128 (274)
T ss_dssp EEEEETTEEEEECTTSCCEEEESSSS
T ss_pred EEEECCCCEEEECCCCCEEEEeCCCC
Confidence 56999999999999999999999763
No 142
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=57.72 E-value=6.3 Score=35.84 Aligned_cols=27 Identities=33% Similarity=0.280 Sum_probs=23.3
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCCcEE
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLEDTIS 277 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nledsIS 277 (483)
+.+++|||++ +|+|-.|+..|..+.-+
T Consensus 119 ~~~L~~GDsi-~~~g~~H~~~N~g~~~a 145 (172)
T 3es1_A 119 KRTVRQGGII-VQRGTNHLWRNTTDKPC 145 (172)
T ss_dssp EEEECTTCEE-EECSCCBEEECCSSSCE
T ss_pred EEEECCCCEE-EeCCCcEEEEeCCCCCE
Confidence 4689999999 99999999999976433
No 143
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=57.12 E-value=7.7 Score=34.22 Aligned_cols=30 Identities=17% Similarity=0.150 Sum_probs=24.9
Q ss_pred EEEEEeCCcEEEeCCCCeEEEEeCCCcEEE
Q 011537 249 LECTQEQNEIIFVPSGWYHQVHNLEDTISI 278 (483)
Q Consensus 249 ~e~vq~pGDiLFVPsGWwHqV~nledsISI 278 (483)
-.+.++|||+..||.|=||....-+++--+
T Consensus 76 ~~V~l~~Ge~yvVPkGveH~p~a~~e~~vL 105 (140)
T 3d0j_A 76 ELTLMEKGKVYNVPAECWFYSITQKDTKMM 105 (140)
T ss_dssp EEEECCTTCCEEECTTCEEEEEECTTCEEE
T ss_pred ceEEecCCCEEEeCCCccCcccCCCceEEE
Confidence 358999999999999999998887664433
No 144
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=55.38 E-value=13 Score=31.70 Aligned_cols=24 Identities=21% Similarity=0.346 Sum_probs=21.6
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLE 273 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nle 273 (483)
+..++|||+++||+|-.|...+.+
T Consensus 57 ~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 57 EFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp EEEECTTCEEEECTTCCEEEEECT
T ss_pred EEEecCCeEEEEcCCCCEEEEeCC
Confidence 568999999999999999988865
No 145
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=55.29 E-value=7.2 Score=38.51 Aligned_cols=31 Identities=10% Similarity=0.177 Sum_probs=25.0
Q ss_pred EEEEEeCCcEEEeCCCCeEEEEeCCCcEEEee
Q 011537 249 LECTQEQNEIIFVPSGWYHQVHNLEDTISINH 280 (483)
Q Consensus 249 ~e~vq~pGDiLFVPsGWwHqV~nledsISIn~ 280 (483)
-.+.++|||.+|||+|-.|....-. .+=|..
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~G~-~~Eiqa 188 (300)
T 1zx5_A 158 NTFETTPYDTFVIRPGIPHAGEGLR-VLEVSS 188 (300)
T ss_dssp EEEECCTTCEEEECTTCCEEEESEE-EEEEEE
T ss_pred ceeECCCCCEEEcCCCCceEcCCCC-eeeecc
Confidence 3688999999999999999977654 555555
No 146
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=53.30 E-value=8.9 Score=40.95 Aligned_cols=25 Identities=16% Similarity=0.189 Sum_probs=22.4
Q ss_pred EEEeCCcEEEeCCCCeEEEEeCCCc
Q 011537 251 CTQEQNEIIFVPSGWYHQVHNLEDT 275 (483)
Q Consensus 251 ~vq~pGDiLFVPsGWwHqV~nleds 275 (483)
..+++||+|.||+|.-|..+|.+++
T Consensus 174 ~~vr~GDviaiPaG~~~w~yN~G~~ 198 (531)
T 3fz3_A 174 RRIREGDVVAIPAGVAYWSYNDGDQ 198 (531)
T ss_dssp EEEETTEEEEECTTCCEEEECCSSS
T ss_pred ecccCCcEEEECCCCeEEEEeCCCc
Confidence 3669999999999999999998774
No 147
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=53.00 E-value=6.5 Score=33.49 Aligned_cols=25 Identities=12% Similarity=0.154 Sum_probs=19.4
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
.+.++|||++++|+||-..-.-.+.
T Consensus 81 ~~~l~aGD~~~~P~G~~gtWev~e~ 105 (116)
T 3es4_A 81 PVKIGPGSIVSIAKGVPSRLEILSS 105 (116)
T ss_dssp CEEECTTEEEEECTTCCEEEEECSC
T ss_pred EEEECCCCEEEECCCCeEEEEEeEE
Confidence 4799999999999999655544443
No 148
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=51.88 E-value=6.8 Score=39.00 Aligned_cols=23 Identities=22% Similarity=0.410 Sum_probs=20.4
Q ss_pred EEEEEeCCcEEEeCCCCeEEEEe
Q 011537 249 LECTQEQNEIIFVPSGWYHQVHN 271 (483)
Q Consensus 249 ~e~vq~pGDiLFVPsGWwHqV~n 271 (483)
-.+.++|||.+|||+|-.|....
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~ 180 (319)
T 1qwr_A 158 RRIKIKPGDFYYVPSGTLHALCK 180 (319)
T ss_dssp EEEECCTTCEEEECTTCCEEECS
T ss_pred eEEEcCCCCEEEcCCCCceEecC
Confidence 36899999999999999999654
No 149
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=51.17 E-value=11 Score=38.67 Aligned_cols=31 Identities=10% Similarity=-0.002 Sum_probs=25.4
Q ss_pred EEEEEeCCcEEEeCCCCeEEEEeCCCcEEEee
Q 011537 249 LECTQEQNEIIFVPSGWYHQVHNLEDTISINH 280 (483)
Q Consensus 249 ~e~vq~pGDiLFVPsGWwHqV~nledsISIn~ 280 (483)
-.+.++|||.+|||+|-.|....-. .+=|..
T Consensus 240 n~v~l~pGd~~fipAG~~HAy~~G~-~~Eima 270 (394)
T 2wfp_A 240 NVVKLNPGEAMFLFAETPHAYLQGV-ALEVMA 270 (394)
T ss_dssp EEEEECTTCEEEECTTCCEEEEEEE-EEEEEC
T ss_pred eEEECCCCCEEEcCCCCceEcCCCc-EEEEec
Confidence 3689999999999999999977654 666655
No 150
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=49.49 E-value=8.8 Score=37.19 Aligned_cols=25 Identities=4% Similarity=-0.075 Sum_probs=23.3
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
...++|||+||+|++--|+.+|.++
T Consensus 231 ~~~v~~GD~~~~~~~~~h~~~n~g~ 255 (278)
T 1sq4_A 231 WVEVEAGDFMWLRAFCPQACYSGGP 255 (278)
T ss_dssp EEEEETTCEEEEEESCCEEEECCSS
T ss_pred EEEeCCCCEEEECCCCCEEEEcCCC
Confidence 5789999999999999999999876
No 151
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=48.77 E-value=13 Score=38.72 Aligned_cols=32 Identities=13% Similarity=0.044 Sum_probs=25.7
Q ss_pred EEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeee
Q 011537 249 LECTQEQNEIIFVPSGWYHQVHNLEDTISINHN 281 (483)
Q Consensus 249 ~e~vq~pGDiLFVPsGWwHqV~nledsISIn~N 281 (483)
-.+.++|||.+|||+|-.|....-. +|=+-.|
T Consensus 266 N~v~L~pGea~flpAg~~HAYl~G~-~vE~Ma~ 297 (440)
T 1pmi_A 266 NHVGLNKGEAMFLQAKDPHAYISGD-IIECMAA 297 (440)
T ss_dssp EEEEECTTCEEEECTTCCEEEEEEE-EEEEEES
T ss_pred ceEecCCCCEEecCCCCccccCCCc-EEEEecc
Confidence 3689999999999999999988754 5555553
No 152
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=45.07 E-value=12 Score=35.32 Aligned_cols=25 Identities=20% Similarity=0.387 Sum_probs=22.6
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
+.+++|||.+|+|++=-|...|.++
T Consensus 87 ~~~l~~Gd~~~~p~~~~H~~~n~~~ 111 (246)
T 1sfn_A 87 TRTLREYDYVYLPAGEKHMLTAKTD 111 (246)
T ss_dssp EEEECTTEEEEECTTCCCEEEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEeCCC
Confidence 4689999999999999999999844
No 153
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=43.49 E-value=91 Score=28.92 Aligned_cols=38 Identities=11% Similarity=0.192 Sum_probs=31.0
Q ss_pred eEEEEEeCCcEEEeCC---CCeEEEEeCCC---------cEEEeeecCCC
Q 011537 248 WLECTQEQNEIIFVPS---GWYHQVHNLED---------TISINHNWFNG 285 (483)
Q Consensus 248 ~~e~vq~pGDiLFVPs---GWwHqV~nled---------sISIn~Nf~~~ 285 (483)
...+.|++||+|.++. .|+|.|..... -||+++-.+..
T Consensus 155 ~~~i~L~~GsllvM~G~~r~~~H~I~~~~~~~~p~~~~~RIsLTFR~~~~ 204 (211)
T 3i3q_A 155 LKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAGK 204 (211)
T ss_dssp CEEEEECTTCEEEECGGGTTCCEEECCCCCCCBTTTBTCEEEEEEECCSC
T ss_pred eEEEECCCCCEEEECchHHceEeccCcccCCcCCCCCCCEEEEEeeeccC
Confidence 4679999999999984 39999998864 78888876654
No 154
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=38.73 E-value=20 Score=34.72 Aligned_cols=25 Identities=12% Similarity=0.327 Sum_probs=22.4
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
+.++++||.+|+|++--|++.|.++
T Consensus 110 ~~~L~~Gds~y~p~~~~H~~~N~~~ 134 (266)
T 4e2q_A 110 SKKLTVDSYAYLPPNFHHSLDCVES 134 (266)
T ss_dssp CEEECTTEEEEECTTCCCEEEESSC
T ss_pred EEEEcCCCEEEECCCCCEEEEeCCC
Confidence 3689999999999999999999655
No 155
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=37.96 E-value=19 Score=31.26 Aligned_cols=30 Identities=7% Similarity=-0.201 Sum_probs=24.4
Q ss_pred EEEeCCcEEEeCCCCeEE-EEeCCCcEEEee
Q 011537 251 CTQEQNEIIFVPSGWYHQ-VHNLEDTISINH 280 (483)
Q Consensus 251 ~vq~pGDiLFVPsGWwHq-V~nledsISIn~ 280 (483)
.+++|||.+++|+|=-|+ +.+.++++-+-+
T Consensus 86 ~~~~~Gd~~~~p~g~~H~p~~~~e~~~~l~~ 116 (145)
T 2o1q_A 86 DTAIAPGYGYESANARHDKTEFPVASEFYMS 116 (145)
T ss_dssp EEEESSEEEEECTTCEESCCEEEEEEEEEEE
T ss_pred eEeCCCEEEEECcCCccCCeECCCCeEEEEE
Confidence 588999999999999999 766777655443
No 156
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=37.15 E-value=38 Score=33.16 Aligned_cols=33 Identities=6% Similarity=0.121 Sum_probs=29.6
Q ss_pred EEEEEeCCcEEEeCCCCeEEEEeCCCcEEEeee
Q 011537 249 LECTQEQNEIIFVPSGWYHQVHNLEDTISINHN 281 (483)
Q Consensus 249 ~e~vq~pGDiLFVPsGWwHqV~nledsISIn~N 281 (483)
.+..|++||+|.||++--|+..-.++|+++...
T Consensus 244 q~~~L~~~DsLLIpa~~~y~~~r~~gsv~L~I~ 276 (286)
T 2qnk_A 244 RRLSLAPDDSLLVLAGTSYAWERTQGSVALSVT 276 (286)
T ss_dssp EEEEECTTEEEEECTTCCEEEEECTTCEEEEEE
T ss_pred eEEeccCCCEEEecCCCeEEEEecCCeEEEEEE
Confidence 367899999999999999999999998888764
No 157
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=36.95 E-value=25 Score=28.70 Aligned_cols=28 Identities=21% Similarity=0.336 Sum_probs=23.8
Q ss_pred eeEEEEEeCCcEEEeCCCCeEEEEeCCC
Q 011537 247 LWLECTQEQNEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 247 ~~~e~vq~pGDiLFVPsGWwHqV~nled 274 (483)
+.++..|++||++.||.|..=...+-..
T Consensus 4 ~~~~~~l~~G~v~vVPq~~~v~~~A~~~ 31 (93)
T 1dgw_Y 4 RRYAATLSEGDIIVIPSSFPVALKAASD 31 (93)
T ss_dssp EEEEEEECTTCEEEECTTCCEEEEESSS
T ss_pred chhhceecCCcEEEECCCCceeEEecCC
Confidence 4578899999999999999888887754
No 158
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=34.70 E-value=24 Score=32.04 Aligned_cols=20 Identities=20% Similarity=0.180 Sum_probs=17.7
Q ss_pred EeCCcE--EEeCCCCeEEEEeC
Q 011537 253 QEQNEI--IFVPSGWYHQVHNL 272 (483)
Q Consensus 253 q~pGDi--LFVPsGWwHqV~nl 272 (483)
+.+||. ++||+|+|+..+++
T Consensus 101 v~~Ge~pQ~vVP~G~wqaa~~~ 122 (170)
T 1yud_A 101 LAAGERPQFLVPKGCIFGSAMN 122 (170)
T ss_dssp TTTTEESCEEECTTCEEEEEES
T ss_pred cccCceeEEEECCCCEEEEEEC
Confidence 456888 99999999999998
No 159
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=31.73 E-value=24 Score=33.67 Aligned_cols=16 Identities=25% Similarity=0.420 Sum_probs=0.0
Q ss_pred EEEEeCCcEEEeCCCC
Q 011537 250 ECTQEQNEIIFVPSGW 265 (483)
Q Consensus 250 e~vq~pGDiLFVPsGW 265 (483)
.++++|||++++|+||
T Consensus 206 ~~~~~aGD~~~~P~G~ 221 (238)
T 3myx_A 206 SLTVNTGDTVFVAQGA 221 (238)
T ss_dssp EEEECTTCEEEECTTC
T ss_pred EEEECCCCEEEECCCC
No 160
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=29.80 E-value=57 Score=30.45 Aligned_cols=23 Identities=9% Similarity=0.088 Sum_probs=20.8
Q ss_pred EEEEeCCcEEEeCCCCeEEEEeC
Q 011537 250 ECTQEQNEIIFVPSGWYHQVHNL 272 (483)
Q Consensus 250 e~vq~pGDiLFVPsGWwHqV~nl 272 (483)
+..+.|||+++||+|=.|.....
T Consensus 50 ~~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 50 SYEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp EEEECTTEEEEECTTCEEEEEEE
T ss_pred eEEEcCCCEEEEcCCCceeeccc
Confidence 46899999999999999998876
No 161
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=29.08 E-value=33 Score=30.37 Aligned_cols=28 Identities=14% Similarity=0.303 Sum_probs=23.6
Q ss_pred EEeCCcEEEeCCCCeEEEEeC----CCcEEEe
Q 011537 252 TQEQNEIIFVPSGWYHQVHNL----EDTISIN 279 (483)
Q Consensus 252 vq~pGDiLFVPsGWwHqV~nl----edsISIn 279 (483)
+..|||.++.|+|=.|++.+. ++++-+.
T Consensus 81 ~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~~ 112 (159)
T 3ebr_A 81 VAHAGSVVYETASTRHTPQSAYAEGPDIITFN 112 (159)
T ss_dssp CBCTTCEEEECSSEEECEEESSSSSSCEEEEE
T ss_pred EECCCeEEEECCCCcceeEeCCCCCCCEEEEE
Confidence 678999999999999999998 5665554
No 162
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=25.96 E-value=50 Score=29.48 Aligned_cols=35 Identities=23% Similarity=0.231 Sum_probs=27.1
Q ss_pred EEeCCcEEEeCCCCeEEEEeCC----CcEEEe-----eecCCCC
Q 011537 252 TQEQNEIIFVPSGWYHQVHNLE----DTISIN-----HNWFNGY 286 (483)
Q Consensus 252 vq~pGDiLFVPsGWwHqV~nle----dsISIn-----~Nf~~~~ 286 (483)
++++||.+++|+|=-|++.+.+ ++|.+. ..|+++.
T Consensus 83 ~~~aGd~~~~P~g~~H~~~a~~~~~~gci~l~v~~GpL~~~~~~ 126 (165)
T 3cjx_A 83 KQTAGCYLYEPGGSIHQFNTPRDNEGQTEVIFMLSGCNVNFTQD 126 (165)
T ss_dssp CEETTEEEEECTTCEECEECCTTCSSCEEEEEEEESCEEEECTT
T ss_pred EECCCeEEEeCCCCceeeEeCCCCCCCcEEEEEEeccceecCCC
Confidence 5789999999999999999987 664444 3566553
No 163
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=24.06 E-value=53 Score=29.89 Aligned_cols=30 Identities=13% Similarity=-0.014 Sum_probs=24.9
Q ss_pred EEEeCCcEEEeCCCCeEEEEe--CCCcEEEee
Q 011537 251 CTQEQNEIIFVPSGWYHQVHN--LEDTISINH 280 (483)
Q Consensus 251 ~vq~pGDiLFVPsGWwHqV~n--ledsISIn~ 280 (483)
.+..+||.+++|+|=-|+..+ .++++-+..
T Consensus 161 ~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~ 192 (195)
T 2q1z_B 161 DRFGAGDIEIADQELEHTPVAERGLDCICLAA 192 (195)
T ss_dssp SEEETTCEEEECSSCCCCCEECSSSCEEEEEE
T ss_pred EEECCCeEEEeCcCCccCCEeCCCCCEEEEEE
Confidence 378999999999999999999 666665543
No 164
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=22.31 E-value=98 Score=29.58 Aligned_cols=87 Identities=14% Similarity=0.111 Sum_probs=48.0
Q ss_pred EEecCCCCCCCcccccCCCccceeEEEeEEEEEEeCCCCcccccCCCCCCccccc-cCCCCcccCCCCCCceeEEEEEeC
Q 011537 177 VYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNI-FDDVSETDFPGFKKTLWLECTQEQ 255 (483)
Q Consensus 177 l~iGp~gs~T~lH~D~~~~~sW~~qV~GrKrW~LfPP~~~~~Ly~~~~~s~~~di-~d~~d~~~fP~~~~a~~~e~vq~p 255 (483)
+.+-..|..+|+|+...-.=-..+--=|.=...||-.+....+-.. ...+ .+. ....+| ..-+++|+|
T Consensus 110 ~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~-----~v~V~~DG-~~~~~~-----aG~~i~L~P 178 (246)
T 3kmh_A 110 IMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADS-----DITVVIDG-CRQKHT-----AGSQLRLSP 178 (246)
T ss_dssp EEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCS-----CEEEEETT-EEEEEC-----TTCEEEECT
T ss_pred EeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCC-----CeEEecCC-eEEEeC-----CCCEEEECC
Confidence 5666678889999877532100222222333455555433222110 0100 011 011122 234789999
Q ss_pred CcEEEeCCCCeEEEEeCCC
Q 011537 256 NEIIFVPSGWYHQVHNLED 274 (483)
Q Consensus 256 GDiLFVPsGWwHqV~nled 274 (483)
||-+-+|+|-||....-+.
T Consensus 179 GESiTl~Pg~~H~F~ae~g 197 (246)
T 3kmh_A 179 GESICLPPGLYHSFWAEAG 197 (246)
T ss_dssp TCEEEECTTEEEEEEECTT
T ss_pred CCeEecCCCCEEEEEecCC
Confidence 9999999999999998876
No 165
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=22.26 E-value=87 Score=28.73 Aligned_cols=36 Identities=8% Similarity=0.299 Sum_probs=29.4
Q ss_pred eeEEEEEeCCcEEEeCCC----CeEEEEeCC----CcEEEeeec
Q 011537 247 LWLECTQEQNEIIFVPSG----WYHQVHNLE----DTISINHNW 282 (483)
Q Consensus 247 ~~~e~vq~pGDiLFVPsG----WwHqV~nle----dsISIn~Nf 282 (483)
....+.|++||+|.++.. |.|.|-... .-||+++-.
T Consensus 158 ~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~~~~~RislTFR~ 201 (204)
T 3s57_A 158 AVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRK 201 (204)
T ss_dssp CCEEEEECTTEEEEEETTHHHHEEEEECCCTTCCSCEEEEEEEC
T ss_pred ceEEEECCCCCEEEECchhhheeEeeccccCCCCCCEEEEEeee
Confidence 457899999999999976 889998874 578888743
Done!