Query 011545
Match_columns 483
No_of_seqs 401 out of 2658
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 10:22:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011545.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011545hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lhh_A CBS domain protein; str 99.9 4.6E-28 1.6E-32 222.9 11.8 140 165-310 5-145 (172)
2 3oi8_A Uncharacterized protein 99.9 1.9E-26 6.4E-31 208.6 13.9 139 166-310 2-141 (156)
3 3ocm_A Putative membrane prote 99.9 4.6E-26 1.6E-30 210.9 12.0 154 183-425 13-167 (173)
4 3lv9_A Putative transporter; C 99.9 4.3E-25 1.5E-29 197.0 11.7 124 185-310 2-126 (148)
5 3oco_A Hemolysin-like protein 99.9 6E-25 2E-29 197.6 6.9 120 189-310 3-124 (153)
6 3kxr_A Magnesium transporter, 99.9 7.2E-22 2.5E-26 187.9 17.3 128 167-310 25-155 (205)
7 3lfr_A Putative metal ION tran 99.9 1.2E-22 3.9E-27 179.3 10.6 104 205-310 2-108 (136)
8 3jtf_A Magnesium and cobalt ef 99.9 4.4E-22 1.5E-26 173.8 13.0 106 203-310 2-107 (129)
9 3k6e_A CBS domain protein; str 99.9 2.6E-22 9E-27 182.6 9.3 111 196-310 4-123 (156)
10 3hf7_A Uncharacterized CBS-dom 99.9 5.4E-22 1.8E-26 173.9 10.4 104 205-310 1-108 (130)
11 3i8n_A Uncharacterized protein 99.9 9.6E-22 3.3E-26 171.7 9.7 107 202-310 2-110 (130)
12 3nqr_A Magnesium and cobalt ef 99.8 5.3E-21 1.8E-25 166.3 11.7 104 205-310 2-107 (127)
13 4esy_A CBS domain containing m 99.8 4.3E-21 1.5E-25 175.5 11.2 113 192-310 6-144 (170)
14 2yvy_A MGTE, Mg2+ transporter 99.8 1.1E-19 3.7E-24 180.0 12.2 118 187-310 116-238 (278)
15 2zy9_A Mg2+ transporter MGTE; 99.8 2.7E-19 9.2E-24 190.6 15.3 134 167-310 111-258 (473)
16 2oux_A Magnesium transporter; 99.8 9.7E-19 3.3E-23 174.3 15.6 117 188-310 119-240 (286)
17 3ctu_A CBS domain protein; str 99.8 4.5E-19 1.5E-23 159.0 9.2 110 197-310 6-123 (156)
18 4gqw_A CBS domain-containing p 99.8 1.7E-18 5.7E-23 153.2 11.5 105 204-310 3-124 (152)
19 2emq_A Hypothetical conserved 99.8 2.1E-18 7.3E-23 154.3 11.1 110 197-310 2-120 (157)
20 3kpb_A Uncharacterized protein 99.8 1.6E-18 5.4E-23 148.4 9.7 101 206-310 1-101 (122)
21 3sl7_A CBS domain-containing p 99.8 1.8E-18 6E-23 157.8 10.3 104 205-310 3-137 (180)
22 3lqn_A CBS domain protein; csg 99.8 1.5E-18 5.1E-23 154.3 9.0 106 201-310 10-124 (150)
23 3fhm_A Uncharacterized protein 99.7 1.6E-18 5.4E-23 157.5 8.8 110 199-310 17-132 (165)
24 2yzi_A Hypothetical protein PH 99.7 1.4E-17 4.9E-22 145.7 12.6 105 201-310 2-110 (138)
25 3k2v_A Putative D-arabinose 5- 99.7 3.3E-18 1.1E-22 152.6 8.7 103 206-310 28-134 (149)
26 2ef7_A Hypothetical protein ST 99.7 1.1E-17 3.8E-22 145.5 11.5 103 203-310 1-106 (133)
27 1yav_A Hypothetical protein BS 99.7 6.4E-18 2.2E-22 152.1 10.1 105 202-310 10-123 (159)
28 3gby_A Uncharacterized protein 99.7 9.4E-18 3.2E-22 145.6 10.0 102 204-310 3-107 (128)
29 2rc3_A CBS domain; in SITU pro 99.7 8.3E-18 2.8E-22 146.9 9.7 101 207-310 7-113 (135)
30 4fry_A Putative signal-transdu 99.7 1E-17 3.6E-22 150.2 10.6 102 206-310 7-117 (157)
31 2p9m_A Hypothetical protein MJ 99.7 2.6E-17 8.9E-22 143.8 11.4 104 203-310 5-117 (138)
32 2rih_A Conserved protein with 99.7 2.1E-17 7.2E-22 145.6 10.4 100 206-310 5-109 (141)
33 2qrd_G Protein C1556.08C; AMPK 99.7 3.3E-17 1.1E-21 164.3 11.5 122 188-310 3-148 (334)
34 3fv6_A YQZB protein; CBS domai 99.7 4.8E-17 1.7E-21 146.7 11.4 103 203-310 14-122 (159)
35 1pbj_A Hypothetical protein; s 99.7 4E-17 1.4E-21 140.0 10.0 100 206-310 1-104 (125)
36 1o50_A CBS domain-containing p 99.7 7E-17 2.4E-21 145.2 11.4 103 202-310 12-134 (157)
37 1pvm_A Conserved hypothetical 99.7 4E-17 1.4E-21 150.9 10.0 101 206-310 9-114 (184)
38 2nyc_A Nuclear protein SNF4; b 99.7 6.7E-17 2.3E-21 141.7 10.6 105 202-310 4-122 (144)
39 1y5h_A Hypothetical protein RV 99.7 3.7E-17 1.3E-21 142.1 8.4 104 203-310 5-113 (133)
40 2j9l_A Chloride channel protei 99.7 5.1E-17 1.7E-21 148.9 9.6 106 203-310 8-147 (185)
41 2pfi_A Chloride channel protei 99.7 6E-17 2E-21 145.4 9.8 110 198-310 5-129 (164)
42 2o16_A Acetoin utilization pro 99.7 6.7E-17 2.3E-21 146.1 10.0 103 204-310 3-117 (160)
43 2uv4_A 5'-AMP-activated protei 99.7 1.4E-16 4.9E-21 142.4 9.8 103 202-310 19-132 (152)
44 3t4n_C Nuclear protein SNF4; C 99.7 5.6E-17 1.9E-21 161.9 7.8 125 185-310 8-153 (323)
45 2v8q_E 5'-AMP-activated protei 99.7 4.9E-17 1.7E-21 163.0 7.4 124 184-310 15-157 (330)
46 1vr9_A CBS domain protein/ACT 99.6 1.8E-15 6.3E-20 143.8 13.5 101 204-310 11-111 (213)
47 3ddj_A CBS domain-containing p 99.6 1.2E-15 4.2E-20 150.3 12.1 130 166-310 64-195 (296)
48 3t4n_C Nuclear protein SNF4; C 99.6 2.4E-15 8.1E-20 150.1 12.0 105 202-310 183-301 (323)
49 3org_A CMCLC; transporter, tra 99.6 4E-16 1.4E-20 171.7 6.7 105 204-310 451-607 (632)
50 1zfj_A Inosine monophosphate d 99.6 2.5E-15 8.6E-20 160.3 12.4 131 166-310 54-192 (491)
51 3ddj_A CBS domain-containing p 99.6 1.6E-15 5.5E-20 149.4 9.9 104 203-310 153-266 (296)
52 3l2b_A Probable manganase-depe 99.6 1.8E-15 6.3E-20 145.9 8.8 102 205-310 6-225 (245)
53 3kh5_A Protein MJ1225; AMPK, A 99.6 3.9E-15 1.3E-19 144.4 10.8 134 166-310 51-187 (280)
54 3usb_A Inosine-5'-monophosphat 99.6 4.9E-15 1.7E-19 159.2 12.5 135 166-310 77-215 (511)
55 3kh5_A Protein MJ1225; AMPK, A 99.6 6.8E-15 2.3E-19 142.8 12.2 102 207-310 4-123 (280)
56 4fxs_A Inosine-5'-monophosphat 99.6 5.7E-16 1.9E-20 165.9 3.7 132 165-310 52-190 (496)
57 2d4z_A Chloride channel protei 99.6 6.7E-15 2.3E-19 144.4 9.8 61 202-265 9-70 (250)
58 3pc3_A CG1753, isoform A; CBS, 99.6 4.7E-15 1.6E-19 159.7 9.0 103 203-310 381-488 (527)
59 2yzq_A Putative uncharacterize 99.5 1.2E-14 4.2E-19 141.5 10.2 103 204-310 124-260 (282)
60 2yzq_A Putative uncharacterize 99.5 9.1E-15 3.1E-19 142.4 7.9 99 206-310 1-99 (282)
61 2qrd_G Protein C1556.08C; AMPK 99.5 6.1E-14 2.1E-18 140.5 12.0 103 204-310 180-296 (334)
62 1me8_A Inosine-5'-monophosphat 99.5 2.5E-15 8.5E-20 161.2 1.8 136 166-310 61-202 (503)
63 4avf_A Inosine-5'-monophosphat 99.5 3.6E-15 1.2E-19 159.5 1.0 130 166-310 52-188 (490)
64 2v8q_E 5'-AMP-activated protei 99.5 1.8E-13 6.1E-18 137.0 12.7 103 205-310 189-304 (330)
65 2cu0_A Inosine-5'-monophosphat 99.5 5.5E-15 1.9E-19 157.8 1.8 128 166-310 57-189 (486)
66 1vrd_A Inosine-5'-monophosphat 99.3 1.5E-13 5.2E-18 146.7 2.0 112 189-310 82-196 (494)
67 4af0_A Inosine-5'-monophosphat 99.2 1.3E-12 4.4E-17 139.0 1.8 110 191-310 128-239 (556)
68 1jcn_A Inosine monophosphate d 99.2 5.1E-13 1.7E-17 143.4 -3.9 102 207-311 109-215 (514)
69 3ghd_A A cystathionine beta-sy 98.9 1.9E-09 6.5E-14 85.2 5.2 65 217-284 1-70 (70)
70 3fio_A A cystathionine beta-sy 98.6 3.8E-08 1.3E-12 75.8 5.2 64 218-284 2-70 (70)
71 1vr9_A CBS domain protein/ACT 98.6 2.6E-08 9E-13 94.2 3.9 103 205-312 71-174 (213)
72 4esy_A CBS domain containing m 98.4 2.1E-07 7.3E-12 84.2 4.5 41 270-310 17-57 (170)
73 3l2b_A Probable manganase-depe 98.2 3E-06 1E-10 81.1 7.6 41 270-310 6-46 (245)
74 3kpb_A Uncharacterized protein 98.1 2.7E-06 9.2E-11 71.8 6.3 39 272-310 2-40 (122)
75 3ghd_A A cystathionine beta-sy 98.1 3.3E-06 1.1E-10 66.4 6.2 30 281-310 2-31 (70)
76 3lv9_A Putative transporter; C 98.1 5.8E-06 2E-10 72.6 7.8 41 270-310 22-64 (148)
77 4fry_A Putative signal-transdu 98.1 1.6E-06 5.4E-11 76.9 3.8 61 203-268 75-135 (157)
78 3fv6_A YQZB protein; CBS domai 98.1 2.1E-06 7.2E-11 76.6 4.4 63 202-266 77-142 (159)
79 3k2v_A Putative D-arabinose 5- 98.0 8.7E-06 3E-10 71.6 7.7 40 271-310 28-69 (149)
80 2yzi_A Hypothetical protein PH 98.0 8.1E-06 2.8E-10 70.4 7.1 40 271-310 7-46 (138)
81 3fio_A A cystathionine beta-sy 98.0 9.7E-06 3.3E-10 62.0 6.7 31 280-310 1-31 (70)
82 2o16_A Acetoin utilization pro 98.0 8.6E-06 2.9E-10 72.7 7.1 40 271-310 5-44 (160)
83 3ctu_A CBS domain protein; str 98.0 8.1E-06 2.8E-10 72.2 6.8 40 271-310 15-56 (156)
84 3gby_A Uncharacterized protein 98.0 8E-06 2.7E-10 69.9 6.4 41 270-310 4-44 (128)
85 2rih_A Conserved protein with 98.0 1.1E-05 3.7E-10 70.1 7.3 40 271-310 5-44 (141)
86 3lfr_A Putative metal ION tran 98.0 5.1E-06 1.8E-10 72.2 5.2 60 203-267 67-126 (136)
87 3lhh_A CBS domain protein; str 98.0 9.7E-06 3.3E-10 73.5 7.2 59 204-267 105-163 (172)
88 2d4z_A Chloride channel protei 98.0 9.9E-06 3.4E-10 79.1 7.7 41 270-310 12-52 (250)
89 3oco_A Hemolysin-like protein 98.0 7.6E-06 2.6E-10 72.5 6.0 58 205-267 85-142 (153)
90 1pbj_A Hypothetical protein; s 98.0 1.4E-05 4.8E-10 67.4 7.4 39 272-310 2-40 (125)
91 2rc3_A CBS domain; in SITU pro 98.0 5.2E-06 1.8E-10 71.5 4.6 60 203-267 71-130 (135)
92 4gqw_A CBS domain-containing p 98.0 3.3E-06 1.1E-10 73.6 3.3 61 203-267 82-142 (152)
93 1pvm_A Conserved hypothetical 98.0 1E-05 3.4E-10 74.0 6.8 62 203-268 72-133 (184)
94 3k6e_A CBS domain protein; str 98.0 1.2E-05 4.2E-10 72.1 7.0 39 272-310 16-56 (156)
95 3lqn_A CBS domain protein; csg 98.0 9.4E-06 3.2E-10 71.2 6.1 41 270-310 14-56 (150)
96 2p9m_A Hypothetical protein MJ 97.9 1.3E-05 4.6E-10 68.9 6.9 40 271-310 8-47 (138)
97 2ef7_A Hypothetical protein ST 97.9 2.1E-05 7.1E-10 67.3 7.9 40 271-310 4-43 (133)
98 3jtf_A Magnesium and cobalt ef 97.9 7E-06 2.4E-10 70.5 4.7 58 204-266 67-124 (129)
99 3i8n_A Uncharacterized protein 97.9 9.5E-06 3.2E-10 69.7 5.4 58 204-266 70-127 (130)
100 3nqr_A Magnesium and cobalt ef 97.9 6.2E-06 2.1E-10 70.6 4.2 58 204-266 67-124 (127)
101 2uv4_A 5'-AMP-activated protei 97.9 1E-05 3.6E-10 71.3 5.8 61 204-266 85-149 (152)
102 3sl7_A CBS domain-containing p 97.9 5.8E-06 2E-10 74.4 4.1 61 202-266 94-154 (180)
103 1yav_A Hypothetical protein BS 97.9 1.6E-05 5.5E-10 70.6 6.7 40 271-310 14-55 (159)
104 3hf7_A Uncharacterized CBS-dom 97.9 9.3E-06 3.2E-10 70.1 4.8 58 204-266 68-125 (130)
105 3fhm_A Uncharacterized protein 97.9 1.9E-05 6.4E-10 70.8 6.9 41 270-310 23-66 (165)
106 2emq_A Hypothetical conserved 97.9 1.7E-05 5.9E-10 69.9 6.3 41 270-310 10-52 (157)
107 1y5h_A Hypothetical protein RV 97.8 1.5E-05 5E-10 68.3 5.4 40 271-310 8-47 (133)
108 1me8_A Inosine-5'-monophosphat 97.8 7.3E-06 2.5E-10 87.7 4.1 100 204-307 159-260 (503)
109 2nyc_A Nuclear protein SNF4; b 97.8 3.2E-05 1.1E-09 66.7 7.3 40 271-310 8-50 (144)
110 3oi8_A Uncharacterized protein 97.8 1.2E-05 4.2E-10 71.5 4.5 55 204-263 101-155 (156)
111 2pfi_A Chloride channel protei 97.8 3.3E-05 1.1E-09 68.3 7.1 41 270-310 12-52 (164)
112 1o50_A CBS domain-containing p 97.8 3.1E-05 1.1E-09 68.6 6.8 41 270-310 15-56 (157)
113 3kxr_A Magnesium transporter, 97.8 1.3E-05 4.4E-10 75.5 4.4 62 203-268 113-174 (205)
114 3pc3_A CG1753, isoform A; CBS, 97.8 8.4E-05 2.9E-09 79.7 11.1 39 271-309 384-423 (527)
115 3ocm_A Putative membrane prote 97.8 4.1E-05 1.4E-09 69.9 7.4 41 270-310 35-77 (173)
116 3usb_A Inosine-5'-monophosphat 97.7 5E-05 1.7E-09 81.4 8.1 104 203-310 172-277 (511)
117 2j9l_A Chloride channel protei 97.7 4.3E-05 1.5E-09 69.0 6.6 40 270-309 10-55 (185)
118 2yvy_A MGTE, Mg2+ transporter 97.6 4E-05 1.4E-09 75.1 4.0 62 203-268 196-257 (278)
119 2oux_A Magnesium transporter; 97.4 5.5E-05 1.9E-09 74.7 3.5 61 203-267 198-258 (286)
120 3org_A CMCLC; transporter, tra 97.3 0.00011 3.9E-09 80.6 4.6 57 207-268 569-625 (632)
121 4avf_A Inosine-5'-monophosphat 97.3 0.00014 4.9E-09 77.5 4.8 99 204-305 145-245 (490)
122 2zy9_A Mg2+ transporter MGTE; 97.2 0.00018 6.1E-09 76.3 4.4 61 203-267 216-276 (473)
123 1vrd_A Inosine-5'-monophosphat 97.2 0.00019 6.3E-09 76.4 4.2 101 204-307 153-255 (494)
124 4fxs_A Inosine-5'-monophosphat 97.1 0.0002 7E-09 76.4 3.1 61 204-266 147-207 (496)
125 1jcn_A Inosine monophosphate d 97.0 0.00037 1.3E-08 74.5 4.0 99 204-306 171-272 (514)
126 2cu0_A Inosine-5'-monophosphat 96.9 0.00062 2.1E-08 72.3 4.6 99 204-310 148-248 (486)
127 4af0_A Inosine-5'-monophosphat 96.8 0.00045 1.6E-08 73.8 3.0 59 204-266 198-256 (556)
128 1zfj_A Inosine monophosphate d 96.8 0.0029 9.8E-08 67.0 8.6 100 204-307 150-251 (491)
129 2jaf_A Halorhodopsin, HR; chro 38.4 1.9E+02 0.0063 28.0 10.4 39 111-151 178-216 (274)
130 3qbg_A Halorhodopsin; membrane 22.0 4.1E+02 0.014 25.8 9.6 21 132-152 212-232 (291)
131 1xio_A Anabaena sensory rhodop 21.5 3.5E+02 0.012 25.7 9.0 40 111-152 145-186 (261)
132 3arc_L Photosystem II reaction 20.2 96 0.0033 20.8 3.1 18 14-31 18-35 (37)
No 1
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.95 E-value=4.6e-28 Score=222.87 Aligned_cols=140 Identities=24% Similarity=0.438 Sum_probs=94.5
Q ss_pred cccCHHHHHHHHhhhccccccCCCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccc
Q 011545 165 VLLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVP 244 (483)
Q Consensus 165 ~~~s~eEL~~Lv~~~~~e~~e~G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlP 244 (483)
..+|++||+.+++ ++++.|.++++|++++++++.+.+.+|+++|+|+.+++++++++|+. ++++.|.+++++++|
T Consensus 5 ~~~t~~el~~l~~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~p 79 (172)
T 3lhh_A 5 DNVTQEDIQAMLQ----EGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLD-ANLRTVMQSPHSRFP 79 (172)
T ss_dssp ------------------------------------------CTTTTSEEGGGCCCEETTSCHH-HHHHHHHTCCCSEEE
T ss_pred ccCCHHHHHHHHH----HHHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEE
Confidence 4689999999998 45678999999999999999999999999999988999999999999 999999999999999
Q ss_pred cccCCCCcEEEEEEchhhhcccccc-ccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 245 VYSGNPTNIIGLILVKNLLSVDYRD-AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 245 Vvd~d~d~iVGIVs~kDLl~~~~~~-~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
|++++.++++|+|+.+|+++..... ..+++++| +++++|++++++.++++.|.+++.+++||+|+
T Consensus 80 Vvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~ 145 (172)
T 3lhh_A 80 VCRNNVDDMVGIISAKQLLSESIAGERLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDE 145 (172)
T ss_dssp EESSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECT
T ss_pred EEeCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeC
Confidence 9986547999999999999875433 56899998 99999999999999999999999999999998
No 2
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.94 E-value=1.9e-26 Score=208.63 Aligned_cols=139 Identities=20% Similarity=0.366 Sum_probs=127.2
Q ss_pred ccCHHHHHHHHhhhccccccCCCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCccccc
Q 011545 166 LLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPV 245 (483)
Q Consensus 166 ~~s~eEL~~Lv~~~~~e~~e~G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPV 245 (483)
.+|++||+.+++ +++++|.++++|++++++++++.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||
T Consensus 2 ~~t~~el~~li~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~-~a~~~m~~~~~~~~pV 76 (156)
T 3oi8_A 2 NASAEDVLNLLR----QAHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIE-RITAYVIDTAHSRFPV 76 (156)
T ss_dssp CCCHHHHHHHHH----HHHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEE
T ss_pred CCCHHHHHHHHH----hHHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHH-HHHHHHHHCCCCEEEE
Confidence 378999999998 45678999999999999999999999999999988999999999999 9999999999999999
Q ss_pred ccCCCCcEEEEEEchhhhccccc-cccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 246 YSGNPTNIIGLILVKNLLSVDYR-DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 246 vd~d~d~iVGIVs~kDLl~~~~~-~~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
++++.++++|+|+.+|+++.... ...+++++| +++.+|++++++.++++.|.+++.+++||+|+
T Consensus 77 vd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~ 141 (156)
T 3oi8_A 77 IGEDKDEVLGILHAKDLLKYMFNPEQFHLKSIL-RPAVFVPEGKSLTALLKEFREQRNHMAIVIDE 141 (156)
T ss_dssp ESSSTTCEEEEEEGGGGGGGSSCGGGCCHHHHC-BCCCEEETTSBHHHHHHHHHHTTCCEEEEECT
T ss_pred EcCCCCcEEEEEEHHHHHHHHHcCCcccHHHHc-CCCEEECCCCCHHHHHHHHHhcCCeEEEEECC
Confidence 98764599999999999987544 356899997 56899999999999999999999999999998
No 3
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.93 E-value=4.6e-26 Score=210.90 Aligned_cols=154 Identities=19% Similarity=0.295 Sum_probs=136.3
Q ss_pred cccCCCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhh
Q 011545 183 AGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNL 262 (483)
Q Consensus 183 ~~e~G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDL 262 (483)
++++|.++++|++++++++.|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+||
T Consensus 13 ~~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl 91 (173)
T 3ocm_A 13 MPAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAA-TIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDL 91 (173)
T ss_dssp -----CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHH-HHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHH
T ss_pred HHhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHH-HHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHH
Confidence 4567999999999999999999999999999988999999999999 999999999999999998655799999999999
Q ss_pred hccccc-cccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEecCCccccccccccCCCCCCCCCCCCccccccc
Q 011545 263 LSVDYR-DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPEKSSQKVDNG 341 (483)
Q Consensus 263 l~~~~~-~~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (483)
+..... ...+++ |++++++|++++++.++++.|.+++.+++||+|+
T Consensus 92 ~~~~~~~~~~~v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde------------------------------- 138 (173)
T 3ocm_A 92 VADLITEGRVRRN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADE------------------------------- 138 (173)
T ss_dssp HHHHHHHSSCCGG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECT-------------------------------
T ss_pred HHHHhcCCcchhH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeC-------------------------------
Confidence 976432 245777 5789999999999999999999999999999998
Q ss_pred cccccccccccccccccccccCCCCCCCccccCCCCCCcccccCCCCCCCCCCCCCceEEEEeHHHHHHHHHhchhhcch
Q 011545 342 VTAAGQNLRNKLESKDAQQTKKVPPATPTFNKRHRGCSYCILDFENGPFPDFPSNDEAVGVITMEDVIEELLQEEILDET 421 (483)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giit~~dv~e~l~~~ei~de~ 421 (483)
+|+++||||++|++++++ +||.||.
T Consensus 139 ------------------------------------------------------~g~lvGiIT~~Dil~~l~-~~i~de~ 163 (173)
T 3ocm_A 139 ------------------------------------------------------FGAIEGLVTPIDVFEAIA-GEFPDED 163 (173)
T ss_dssp ------------------------------------------------------TCCEEEEECHHHHHHHHH-CCCCCTT
T ss_pred ------------------------------------------------------CCCEEEEEeHHHHHHHHh-CcCCCcc
Confidence 479999999999999998 7999999
Q ss_pred hhhh
Q 011545 422 DEYV 425 (483)
Q Consensus 422 d~~~ 425 (483)
|.+.
T Consensus 164 ~~~~ 167 (173)
T 3ocm_A 164 ELPD 167 (173)
T ss_dssp SCC-
T ss_pred ccHh
Confidence 9754
No 4
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.92 E-value=4.3e-25 Score=196.96 Aligned_cols=124 Identities=20% Similarity=0.413 Sum_probs=100.3
Q ss_pred cCCCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhc
Q 011545 185 KGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLS 264 (483)
Q Consensus 185 e~G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~ 264 (483)
++|.++++|++++++++.+.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++
T Consensus 2 ~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~ 80 (148)
T 3lv9_A 2 NAGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEE-KILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYN 80 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHH-HHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHH
T ss_pred CCCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHH-HHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHH
Confidence 46889999999999999999999999999988999999999999 99999999999999999875479999999999998
Q ss_pred ccccc-ccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 265 VDYRD-AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 265 ~~~~~-~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
..... ..+++++| +++.+|++++++.++++.|.+++.+.+||+|+
T Consensus 81 ~~~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 126 (148)
T 3lv9_A 81 QKINENKIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDE 126 (148)
T ss_dssp HHHHHSCCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHhcCCCccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeC
Confidence 75433 57899998 99999999999999999999999999999998
No 5
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.91 E-value=6e-25 Score=197.61 Aligned_cols=120 Identities=23% Similarity=0.386 Sum_probs=106.1
Q ss_pred CCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccc-cCCCCcEEEEEEchhhhcccc
Q 011545 189 LTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVY-SGNPTNIIGLILVKNLLSVDY 267 (483)
Q Consensus 189 L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVv-d~d~d~iVGIVs~kDLl~~~~ 267 (483)
++++|++++++++.+.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||+ +++.++++|+|+.+|+++...
T Consensus 3 l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~ 81 (153)
T 3oco_A 3 ADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIA-DALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQAR 81 (153)
T ss_dssp -----CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHH-HHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHH
T ss_pred cCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHH-HHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHh
Confidence 6788999999999999999999999988999999999999 99999999999999999 654479999999999987643
Q ss_pred cc-ccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 268 RD-AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 268 ~~-~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.. ..+++++| +++++|++++++.++++.|.+++.+.+||+|+
T Consensus 82 ~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 124 (153)
T 3oco_A 82 IDDKAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDE 124 (153)
T ss_dssp HHTTSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECT
T ss_pred cCCCCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeC
Confidence 32 56899998 99999999999999999999999999999998
No 6
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.88 E-value=7.2e-22 Score=187.87 Aligned_cols=128 Identities=9% Similarity=0.095 Sum_probs=114.4
Q ss_pred cCHHHHHHHHhhhccccccCCCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHc---CCccc
Q 011545 167 LRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTM---GHSRV 243 (483)
Q Consensus 167 ~s~eEL~~Lv~~~~~e~~e~G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~---~~srl 243 (483)
+.+++.+.++. .+++++++++++++.|++.+|+++|++ +++++++++|+. ++++.|++. +++.+
T Consensus 25 l~~~~~~~~l~----------~l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-eal~~~~~~~~~~~~~~ 91 (205)
T 3kxr_A 25 LPESFTDRALA----------QMGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVA-QAQRFFRRIELDCNDNL 91 (205)
T ss_dssp SCHHHHHHHHH----------HSCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHH-HHHHHHHHCCCTTCCEE
T ss_pred CCHHHHHHHHH----------cCCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHH-HHHHHHHhhCccCeeEE
Confidence 44556666664 378999999999999999999999996 789999999999 999999997 78999
Q ss_pred ccccCCCCcEEEEEEchhhhccccccccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 244 PVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 244 PVvd~d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
||++++ ++++|+|+.+||+.... ..+++++|.+++.+|++++++.++++.|.+++.+.+||||+
T Consensus 92 ~Vvd~~-~~lvGivt~~dll~~~~--~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~ 155 (205)
T 3kxr_A 92 FIVDEA-DKYLGTVRRYDIFKHEP--HEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDD 155 (205)
T ss_dssp EEECTT-CBEEEEEEHHHHTTSCT--TSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECT
T ss_pred EEEcCC-CeEEEEEEHHHHHhCCC--cchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcC
Confidence 999875 89999999999987643 45899999899999999999999999999999999999998
No 7
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.88 E-value=1.2e-22 Score=179.35 Aligned_cols=104 Identities=30% Similarity=0.509 Sum_probs=93.6
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccc---ccccchhhhhccCC
Q 011545 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY---RDAVPLRKMIIRRI 281 (483)
Q Consensus 205 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~---~~~~~V~dIM~r~v 281 (483)
+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||++++.++++|+|+.+||++... ....+++++| +++
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m-~~~ 79 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPR-EFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLL-RPA 79 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTC-BCC
T ss_pred CCChHhccccHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHc-CCC
Confidence 678999999988999999999999 99999999999999999875479999999999998753 2346899997 568
Q ss_pred cEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 282 PRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 282 ~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.+|++++++.++++.|.+++.+++||+|+
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~ 108 (136)
T 3lfr_A 80 TFVPESKRLNVLLREFRANHNHMAIVIDE 108 (136)
T ss_dssp CEEETTCBHHHHHHHHHHHTCCEEEEECT
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeC
Confidence 99999999999999999999999999998
No 8
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.87 E-value=4.4e-22 Score=173.80 Aligned_cols=106 Identities=34% Similarity=0.539 Sum_probs=95.9
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccccccchhhhhccCCc
Q 011545 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP 282 (483)
Q Consensus 203 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~r~v~ 282 (483)
..+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++.......+++++| +++.
T Consensus 2 ~~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~v~~~m-~~~~ 79 (129)
T 3jtf_A 2 NAERTVADIMVPRSRMDLLDISQPLP-QLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEPALDIRSLV-RPAV 79 (129)
T ss_dssp --CCBHHHHCEEGGGCCCEETTSCHH-HHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCTTSCGGGGC-BCCC
T ss_pred CCCCCHHHhCccHHHeEEECCCCCHH-HHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccCCcCHHHHh-CCCe
Confidence 46789999999988999999999999 999999999999999998744799999999999987655567899996 6788
Q ss_pred EecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 283 RVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 283 ~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+|++++++.++++.|.+++.+++||+|+
T Consensus 80 ~v~~~~~l~~~~~~m~~~~~~~~pVvd~ 107 (129)
T 3jtf_A 80 FIPEVKRLNVLLREFRASRNHLAIVIDE 107 (129)
T ss_dssp EEETTCBHHHHHHHHHTSSCCEEEEECC
T ss_pred EeCCCCcHHHHHHHHHhcCCeEEEEEeC
Confidence 9999999999999999999999999998
No 9
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.86 E-value=2.6e-22 Score=182.56 Aligned_cols=111 Identities=17% Similarity=0.251 Sum_probs=96.2
Q ss_pred HHHHHhc-CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc------
Q 011545 196 IIAGALE-LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR------ 268 (483)
Q Consensus 196 ~I~~vl~-l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~------ 268 (483)
||.+.++ |-..+++++|+|+.+++++++++|+. +|++.|.+++++++||+|++ ++++|+|+.+|++++...
T Consensus 4 mi~~~~e~~l~~~~~~iM~P~~~v~~v~~~~t~~-~a~~~m~~~~~s~~pVvd~~-~~lvGiit~~Di~~~~~~~~~~~~ 81 (156)
T 3k6e_A 4 MIAKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQE 81 (156)
T ss_dssp HHHHHHHHHHHTTGGGGEEETTSSCCEETTSBHH-HHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHH
T ss_pred hHHHHHHHHhhccHHHhCcchhHeEEECCcCCHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEecchhhhhhhcccccc
Confidence 5555553 55678999999999999999999999 99999999999999999875 899999999999865321
Q ss_pred --cccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 269 --DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 269 --~~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
...++.++|.+++.+|++++++.++++.|.+++ ++||||+
T Consensus 82 ~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~ 123 (156)
T 3k6e_A 82 IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDA 123 (156)
T ss_dssp HHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECT
T ss_pred cccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEec
Confidence 246899999999999999999999999999775 5999998
No 10
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.86 E-value=5.4e-22 Score=173.93 Aligned_cols=104 Identities=17% Similarity=0.322 Sum_probs=93.8
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccccc----ccchhhhhccC
Q 011545 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD----AVPLRKMIIRR 280 (483)
Q Consensus 205 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~----~~~V~dIM~r~ 280 (483)
+++|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++....+ ..+++++| ++
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m-~~ 78 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWK-SIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAA-DE 78 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHH-HHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHS-BC
T ss_pred CcCHHHhCccHHHEEEEcCCCCHH-HHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhc-cC
Confidence 368999999988999999999999 9999999999999999976447999999999999875443 24689987 88
Q ss_pred CcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 281 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 281 v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+.+|++++++.++++.|.+++.+++||+|+
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~ 108 (130)
T 3hf7_A 79 IYFVPEGTPLSTQLVKFQRNKKKVGLVVDE 108 (130)
T ss_dssp CCEEETTCBHHHHHHHHHHHCCCEEEEECT
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEcC
Confidence 999999999999999999999999999998
No 11
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.85 E-value=9.6e-22 Score=171.66 Aligned_cols=107 Identities=22% Similarity=0.336 Sum_probs=93.3
Q ss_pred cCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccccc--ccchhhhhcc
Q 011545 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD--AVPLRKMIIR 279 (483)
Q Consensus 202 ~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~--~~~V~dIM~r 279 (483)
+|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++..... ..+++++| +
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m-~ 79 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTIN-EFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAVM-R 79 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHH-HHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHHS-E
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHHh-c
Confidence 468899999999988899999999999 9999999999999999986547999999999998775332 46899997 7
Q ss_pred CCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 280 RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 280 ~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
++.++++++++.++++.|.+++.+.+||+|+
T Consensus 80 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~ 110 (130)
T 3i8n_A 80 PIQVVLNNTALPKVFDQMMTHRLQLALVVDE 110 (130)
T ss_dssp ECCEEETTSCHHHHHHHHHHHTCCEEEEECT
T ss_pred CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcC
Confidence 7899999999999999999999999999998
No 12
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.84 E-value=5.3e-21 Score=166.29 Aligned_cols=104 Identities=30% Similarity=0.513 Sum_probs=93.1
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc--cccchhhhhccCCc
Q 011545 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR--DAVPLRKMIIRRIP 282 (483)
Q Consensus 205 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~--~~~~V~dIM~r~v~ 282 (483)
+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++.... ...+++++| +++.
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m-~~~~ 79 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLD-ECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVL-RTAV 79 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHC-BCCC
T ss_pred CcCHHHhcccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHc-CCCe
Confidence 678999999877899999999999 999999999999999998754799999999999976432 356899997 6688
Q ss_pred EecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 283 RVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 283 ~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
++++++++.++++.|.+++.+.+||+|+
T Consensus 80 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 107 (127)
T 3nqr_A 80 VVPESKRVDRMLKEFRSQRYHMAIVIDE 107 (127)
T ss_dssp EEETTCBHHHHHHHHHHTTCCEEEEECT
T ss_pred EECCCCcHHHHHHHHHhcCCeEEEEEeC
Confidence 9999999999999999999999999997
No 13
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.84 E-value=4.3e-21 Score=175.51 Aligned_cols=113 Identities=16% Similarity=0.252 Sum_probs=98.3
Q ss_pred HHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc---
Q 011545 192 DETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR--- 268 (483)
Q Consensus 192 eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~--- 268 (483)
.+++.+.+.+ .+++|+|+|++ +++++++++|+. ++++.|.+++++++||+|++ |+++|+|+.+|+++....
T Consensus 6 ~~~~~~~~~l--~~~~V~diM~~--~v~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dll~~~~~~~~ 79 (170)
T 4esy_A 6 ARRRAIARAI--RQVPIRDILTS--PVVTVREDDTLD-AVAKTMLEHQIGCAPVVDQN-GHLVGIITESDFLRGSIPFWI 79 (170)
T ss_dssp HHHHHHHHHH--HTSBGGGGCCS--CCCCEETTSBHH-HHHHHHHHTTCSEEEEECTT-SCEEEEEEGGGGGGGTCCTTH
T ss_pred HHHHHHHHHH--cCCCHHHhcCC--CCcEECCcCcHH-HHHHHHHHcCCeEEEEEcCC-ccEEEEEEHHHHHHHHhhccc
Confidence 3444555544 68899999985 789999999999 99999999999999999876 899999999999865321
Q ss_pred -----------------------cccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 269 -----------------------DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 269 -----------------------~~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
...+++++|.+++.+|++++++.++++.|.+++++.+||+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~ 144 (170)
T 4esy_A 80 YEASEILSRAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQD 144 (170)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEET
T ss_pred cchhhhhhhccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEEC
Confidence 135789999999999999999999999999999999999987
No 14
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.80 E-value=1.1e-19 Score=179.95 Aligned_cols=118 Identities=13% Similarity=0.157 Sum_probs=108.4
Q ss_pred CCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHc-----CCcccccccCCCCcEEEEEEchh
Q 011545 187 GDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTM-----GHSRVPVYSGNPTNIIGLILVKN 261 (483)
Q Consensus 187 G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~-----~~srlPVvd~d~d~iVGIVs~kD 261 (483)
+.++.+++.++.+++.+.+.+|+++|++ +++++++++|+. ++++.|+++ +++++||++++ ++++|+|+.+|
T Consensus 116 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~d 191 (278)
T 2yvy_A 116 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRD 191 (278)
T ss_dssp HHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHH-HHHHHHHHHTTTCSCSSEEEEECTT-CBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHH-HHHHHHHHccCCccceeEEEEECCC-CCEEEEEEHHH
Confidence 3578899999999999999999999996 789999999999 999999987 78999999875 89999999999
Q ss_pred hhccccccccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 262 LLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 262 Ll~~~~~~~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
++... ...+++++|.+++++|++++++.++++.|.+++.+.+||||+
T Consensus 192 ll~~~--~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 238 (278)
T 2yvy_A 192 LIVAD--PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDE 238 (278)
T ss_dssp HHHSC--TTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HhcCC--CCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeC
Confidence 98753 345899999899999999999999999999999999999998
No 15
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.80 E-value=2.7e-19 Score=190.61 Aligned_cols=134 Identities=13% Similarity=0.156 Sum_probs=118.9
Q ss_pred cCHHHHHHHHhhhccccccC---------CCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHH
Q 011545 167 LRRAELKTFVNFHGNEAGKG---------GDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMT 237 (483)
Q Consensus 167 ~s~eEL~~Lv~~~~~e~~e~---------G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~ 237 (483)
++++|+..+++. ..++ +.+++++++++++++++++.+|+++|++ +++++++++|+. ++++.|++
T Consensus 111 l~~dd~~~ll~~----l~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~-ea~~~~~~ 183 (473)
T 2zy9_A 111 LSLDDLADALQA----VRKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRR 183 (473)
T ss_dssp SCHHHHHHHHHH----HHHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHH-HHHHHHHH
T ss_pred CCHHHHHHHHHh----CCHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHH-HHHHHHHh
Confidence 566777777763 2233 6899999999999999999999999996 899999999999 99999998
Q ss_pred c-----CCcccccccCCCCcEEEEEEchhhhccccccccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 238 M-----GHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 238 ~-----~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+ +++++||+|++ ++++|+|+.+|++... .+.+++++|.+++.+|++++++.++++.|++++.+.+||||+
T Consensus 184 ~~~~~~~~~~ipVvd~~-~~lvGiVt~~Dll~~~--~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe 258 (473)
T 2zy9_A 184 AAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVAD--PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDE 258 (473)
T ss_dssp HGGGCSEEEEEEEECTT-SBEEEEEEHHHHHHSC--TTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECT
T ss_pred ccCCcCceeEEEEECCC-CcEEEEEEHHHHhcCC--CCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcC
Confidence 7 47999999876 8999999999998754 345899999899999999999999999999999999999998
No 16
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.79 E-value=9.7e-19 Score=174.29 Aligned_cols=117 Identities=17% Similarity=0.171 Sum_probs=108.1
Q ss_pred CCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHc-----CCcccccccCCCCcEEEEEEchhh
Q 011545 188 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTM-----GHSRVPVYSGNPTNIIGLILVKNL 262 (483)
Q Consensus 188 ~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~-----~~srlPVvd~d~d~iVGIVs~kDL 262 (483)
.++.+++..+.+++.+.+.+|+++|++ +++++++++|+. ++++.|+++ +++++||++++ ++++|+|+.+|+
T Consensus 119 ~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~pVvd~~-~~lvGivt~~dl 194 (286)
T 2oux_A 119 LLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVR-SAMYVLKNQADMAETIYYVYVVDQE-NHLVGVISLRDL 194 (286)
T ss_dssp TSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHH-HHHHHHHHHCSSCSCCSEEEEECTT-CBEEEEEEHHHH
T ss_pred cCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHH-HHHHHHHHcccCccceeEEEEEcCC-CeEEEEEEHHHH
Confidence 478889999999999999999999985 788999999999 999999998 88999999875 899999999999
Q ss_pred hccccccccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 263 LSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 263 l~~~~~~~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+.... ..++.++|.+++.+|++++++.++++.|.+++.+.+||||+
T Consensus 195 l~~~~--~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~ 240 (286)
T 2oux_A 195 IVNDD--DTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDY 240 (286)
T ss_dssp TTSCT--TSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HcCCC--CCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcC
Confidence 87643 45899999899999999999999999999999999999997
No 17
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.77 E-value=4.5e-19 Score=158.98 Aligned_cols=110 Identities=15% Similarity=0.193 Sum_probs=96.6
Q ss_pred HHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccccc-------
Q 011545 197 IAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD------- 269 (483)
Q Consensus 197 I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~------- 269 (483)
-....++...+|+++|+|+.+++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++.....
T Consensus 6 ~~~~~~l~~~~v~dim~p~~~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~ 83 (156)
T 3ctu_A 6 AKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQEIM 83 (156)
T ss_dssp HHHHHHHHHTTGGGGEEEGGGCCCEETTSBHH-HHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHH
T ss_pred cHHHHHHHHHHHHHHcCcccCceEECCCCCHH-HHHHHHHHCCCceEeEECCC-CEEEEEEcHHHHHHHHHhcccccccc
Confidence 34455677889999999988999999999999 99999999999999999875 8999999999998764321
Q ss_pred -ccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 270 -AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 270 -~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
..++.++|.+++.++++++++.++++.|.+++ .+||+|+
T Consensus 84 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~ 123 (156)
T 3ctu_A 84 ADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDA 123 (156)
T ss_dssp TTSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECT
T ss_pred ccCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcC
Confidence 46899999899999999999999999999886 6999997
No 18
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.77 E-value=1.7e-18 Score=153.16 Aligned_cols=105 Identities=16% Similarity=0.163 Sum_probs=93.7
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccc----------------
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY---------------- 267 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~---------------- 267 (483)
...+|+++|+++.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++....
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~ 80 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVD-EALELLVENRITGFPVIDED-WKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLS 80 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHTTCC----CCHHHHHHHTC--
T ss_pred ceEEhhhccCCCCCCeEECCCCcHH-HHHHHHHHcCCceEEEEeCC-CeEEEEEEHHHHHHhhcccCcccchHHHHHHHH
Confidence 4678999999877899999999999 99999999999999999876 89999999999986421
Q ss_pred -ccccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 268 -RDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 268 -~~~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
....++.++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 81 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~ 124 (152)
T 4gqw_A 81 KTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDS 124 (152)
T ss_dssp ---CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECT
T ss_pred HhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECC
Confidence 1246899999888999999999999999999999999999997
No 19
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.76 E-value=2.1e-18 Score=154.26 Aligned_cols=110 Identities=20% Similarity=0.257 Sum_probs=92.3
Q ss_pred HHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc--------
Q 011545 197 IAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-------- 268 (483)
Q Consensus 197 I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~-------- 268 (483)
..+...+.+.+|+++|+++.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+++....
T Consensus 2 ~~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~ 79 (157)
T 2emq_A 2 TWEHNEFMQMTVKPFLIPADKVAHVQPGNYLD-HALLVLTKTGYSAIPVLDTS-YKLHGLISMTMMMDAILGLERIEFER 79 (157)
T ss_dssp --------CCBSTTTCEEGGGSCCBCTTSBHH-HHHHHHHHSSSSEEEEECTT-CCEEEEEEHHHHHHHSBCSSSBCGGG
T ss_pred chhHhhHhhCcHHhhccCCccceEECCCCcHH-HHHHHHHHCCceEEEEEcCC-CCEEEEeeHHHHHHHHhcccccchHH
Confidence 34556678899999999766888999999999 99999999999999999875 899999999999876432
Q ss_pred -cccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 269 -DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 269 -~~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
...++.++|.+++.++++++++.++++.|.+++. +||+|+
T Consensus 80 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~ 120 (157)
T 2emq_A 80 LETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEND 120 (157)
T ss_dssp GGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECS
T ss_pred hcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcC
Confidence 2468999999999999999999999999999976 999987
No 20
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.76 E-value=1.6e-18 Score=148.44 Aligned_cols=101 Identities=12% Similarity=0.246 Sum_probs=92.7
Q ss_pred cccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccccccchhhhhccCCcEec
Q 011545 206 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVS 285 (483)
Q Consensus 206 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~r~v~~V~ 285 (483)
.+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+++.......++.++|.+++.+++
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~v~~~~~~~~~~v~ 76 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIM-EAAKILIKHNINHLPIVDEH-GKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAH 76 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHH-HHHHHHHHHTCSCEEEECTT-SBEEEEECHHHHHHHHHTTCCBGGGTSBSSCCCEE
T ss_pred CchHHhhCC--CCEEeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CCEEEEEEHHHHHHHHHhcccCHHHHhcCCCeEEC
Confidence 478999996 678899999999 99999999999999999865 89999999999998765555689999989999999
Q ss_pred CCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 286 EDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 286 ~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+++++.++++.|.+++.+.+||+|+
T Consensus 77 ~~~~l~~~~~~~~~~~~~~l~Vvd~ 101 (122)
T 3kpb_A 77 EDEPVDHVAIKMSKYNISGVPVVDD 101 (122)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred CCCCHHHHHHHHHHhCCCeEEEECC
Confidence 9999999999999999999999998
No 21
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.76 E-value=1.8e-18 Score=157.77 Aligned_cols=104 Identities=17% Similarity=0.192 Sum_probs=93.1
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccc------------------
Q 011545 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD------------------ 266 (483)
Q Consensus 205 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~------------------ 266 (483)
..+|+++|+++.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+||++..
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 80 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVD-DALELLVEKKVTGLPVIDDN-WTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDS 80 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHTCC-------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CeEEEEEEHHHHHhhhhhccccCCcccccccccc
Confidence 468999999877899999999999 99999999999999999875 8999999999998531
Q ss_pred -------------cccccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 267 -------------YRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 267 -------------~~~~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.....+++++|.+++++|++++++.++++.|.+++.+.+||+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 137 (180)
T 3sl7_A 81 TWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDA 137 (180)
T ss_dssp CCCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECT
T ss_pred hhhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECC
Confidence 11245899999988999999999999999999999999999997
No 22
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.75 E-value=1.5e-18 Score=154.34 Aligned_cols=106 Identities=17% Similarity=0.198 Sum_probs=94.4
Q ss_pred hcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc---------ccc
Q 011545 201 LELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---------DAV 271 (483)
Q Consensus 201 l~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~---------~~~ 271 (483)
..|.+++|+++|+|+.+++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+||++.... ...
T Consensus 10 ~~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~ 87 (150)
T 3lqn_A 10 DEFQQIFVKDLMISSEKVAHVQIGNGLE-HALLVLVKSGYSAIPVLDPM-YKLHGLISTAMILDGILGLERIEFERLEEM 87 (150)
T ss_dssp HHHHHCBHHHHSEEGGGSCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHTBCSSSBCGGGGGGC
T ss_pred HhhhcCChhhcccCCCceEEECCCCcHH-HHHHHHHHcCCcEEEEECCC-CCEEEEEEHHHHHHHHHhhcccchhHHhcC
Confidence 3467889999999877889999999999 99999999999999999875 899999999999876421 246
Q ss_pred chhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 272 PLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 272 ~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
++.++|.+++.++++++++.++++.|.+++. +||+|+
T Consensus 88 ~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~ 124 (150)
T 3lqn_A 88 KVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNE 124 (150)
T ss_dssp BGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECT
T ss_pred CHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECC
Confidence 8999999999999999999999999999886 999997
No 23
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.75 E-value=1.6e-18 Score=157.45 Aligned_cols=110 Identities=9% Similarity=0.124 Sum_probs=98.0
Q ss_pred HHhcCcccccccccccC-ccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc-----cccc
Q 011545 199 GALELTEKTAKDAMTPI-SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVP 272 (483)
Q Consensus 199 ~vl~l~~~tV~dIMtPr-~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~-----~~~~ 272 (483)
....+..++|+++|+|+ .+++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++.... ...+
T Consensus 17 ~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~ 94 (165)
T 3fhm_A 17 LYFQGMATFVKDLLDRKGRDVVTVGPDVSIG-EAAGTLHAHKIGAVVVTDAD-GVVLGIFTERDLVKAVAGQGAASLQQS 94 (165)
T ss_dssp CCCSSSSCBHHHHHHHHCSCCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHGGGGGTSB
T ss_pred hhHhhhhcCHHHHhccCCCCCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHhcCCccccCC
Confidence 44567889999999974 5688999999999 99999999999999999865 899999999999875322 2468
Q ss_pred hhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 273 LRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 273 V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+.++|.+++.+|++++++.++++.|.+++.+.+||+|+
T Consensus 95 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 132 (165)
T 3fhm_A 95 VSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN 132 (165)
T ss_dssp GGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred HHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 99999999999999999999999999999999999997
No 24
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.74 E-value=1.4e-17 Score=145.69 Aligned_cols=105 Identities=13% Similarity=0.275 Sum_probs=92.9
Q ss_pred hcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhc-cccc---cccchhhh
Q 011545 201 LELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLS-VDYR---DAVPLRKM 276 (483)
Q Consensus 201 l~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~-~~~~---~~~~V~dI 276 (483)
+.|...+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+++ .... ...++.++
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~ 77 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQ-EASRLMMEFDVGSLVVINDD-GNVVGFFTKSDIIRRVIVPGLPYDIPVERI 77 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCCCTTSBGGGT
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHhcCCcccCCHHHH
Confidence 46788999999984 788899999999 99999999999999999865 89999999999973 3222 24689999
Q ss_pred hccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 277 IIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 277 M~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
|.+++.++++++++.++++.|.+++.+.+ |+|+
T Consensus 78 m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~ 110 (138)
T 2yzi_A 78 MTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEE 110 (138)
T ss_dssp CBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEE
T ss_pred hhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECC
Confidence 98999999999999999999999999999 9997
No 25
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.74 E-value=3.3e-18 Score=152.56 Aligned_cols=103 Identities=22% Similarity=0.212 Sum_probs=94.1
Q ss_pred cccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc----cccchhhhhccCC
Q 011545 206 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----DAVPLRKMIIRRI 281 (483)
Q Consensus 206 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~----~~~~V~dIM~r~v 281 (483)
.+|+++|+++.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+++.... ...++.++|.+++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~ 105 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLR-DALLEITRKNLGMTAICDDD-MNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGG 105 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHH-HHHHHHHHHTSSEEEEECTT-CBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESC
T ss_pred cCHHHHhcCCCCCeEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCC
Confidence 58999999766889999999999 99999999999999999865 899999999999876433 2468999999999
Q ss_pred cEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 282 PRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 282 ~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.+|++++++.++++.|.+++.+.+||+|+
T Consensus 106 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 134 (149)
T 3k2v_A 106 IRIRPGTLAVDALNLMQSRHITCVLVADG 134 (149)
T ss_dssp CEECTTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEecC
Confidence 99999999999999999999999999998
No 26
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.73 E-value=1.1e-17 Score=145.47 Aligned_cols=103 Identities=17% Similarity=0.239 Sum_probs=92.5
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc---cccchhhhhcc
Q 011545 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---DAVPLRKMIIR 279 (483)
Q Consensus 203 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~---~~~~V~dIM~r 279 (483)
+.+.+|+++|++ +++++++++++. ++++.|.+++++++||++ + ++++|+|+.+|+++.... ...++.++|.+
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~ 75 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLN-DIAKVMTEKNIGSVIVVD-G-NKPVGIITERDIVKAIGKGKSLETKAEEFMTA 75 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEE
T ss_pred CCcccHHHhccC--CCEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEcHHHHHHHHhcCCCcccCHHHHcCC
Confidence 467899999986 678899999999 999999999999999998 4 899999999999865332 24689999988
Q ss_pred CCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 280 RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 280 ~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
++.++++++++.++++.|.+++.+.+||+|+
T Consensus 76 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~ 106 (133)
T 2ef7_A 76 SLITIREDSPITGALALMRQFNIRHLPVVDD 106 (133)
T ss_dssp CCCCEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred CCEEECCCCCHHHHHHHHHHcCCCEEEEECC
Confidence 9999999999999999999999999999997
No 27
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.73 E-value=6.4e-18 Score=152.09 Aligned_cols=105 Identities=19% Similarity=0.308 Sum_probs=93.2
Q ss_pred cCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc---------cccc
Q 011545 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---------DAVP 272 (483)
Q Consensus 202 ~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~---------~~~~ 272 (483)
.+...+|+++|+++.+++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+||+..... ...+
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~ 87 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLE-HALLVLTKTGYTAIPVLDPS-YRLHGLIGTNMIMNSIFGLERIEFEKLDQIT 87 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEEHHHHHHHHBCSSSBCGGGTTTSB
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CCEEEEeEHHHHHHHhhhhcccchhhhccCC
Confidence 577899999999766889999999999 99999999999999999875 799999999999875422 2468
Q ss_pred hhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 273 LRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 273 V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+.++|.+++.+|++++++.++++.|.+++. +||+|+
T Consensus 88 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~ 123 (159)
T 1yav_A 88 VEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVEND 123 (159)
T ss_dssp HHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECT
T ss_pred HHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeC
Confidence 999998999999999999999999999876 999997
No 28
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.73 E-value=9.4e-18 Score=145.63 Aligned_cols=102 Identities=14% Similarity=0.183 Sum_probs=92.6
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccccc---cchhhhhccC
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDA---VPLRKMIIRR 280 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~~---~~V~dIM~r~ 280 (483)
...+|+++|++ ++.++++++++. ++++.|.+++++++||+++ ++++|+|+.+|+++...+.. .+++++|.++
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 77 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTA-DAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLET 77 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBC
T ss_pred cceEHHHhhcC--CcceECCCCCHH-HHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhCCcccCcHHHHccCC
Confidence 56899999985 678899999999 9999999999999999986 89999999999998754432 5699999999
Q ss_pred CcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 281 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 281 v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+.++++++++.++++.|.+++.+.+||+|+
T Consensus 78 ~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~ 107 (128)
T 3gby_A 78 VRSYRPGEQLFDNLISVAAAKCSVVPLADE 107 (128)
T ss_dssp CCCBCTTSBGGGSHHHHHHCSSSEEEEECT
T ss_pred CcEECCCCCHHHHHHHHHhCCCcEEEEECC
Confidence 999999999999999999999999999997
No 29
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.73 E-value=8.3e-18 Score=146.89 Aligned_cols=101 Identities=10% Similarity=0.181 Sum_probs=90.8
Q ss_pred ccccccccC-ccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhc-ccc----ccccchhhhhccC
Q 011545 207 TAKDAMTPI-SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLS-VDY----RDAVPLRKMIIRR 280 (483)
Q Consensus 207 tV~dIMtPr-~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~-~~~----~~~~~V~dIM~r~ 280 (483)
+|+++|+|+ .+++++++++++. ++++.|.+++++++||++ + ++++|+|+.+|+++ ... ....++.++|.++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~ 83 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVF-NAMQKMAADNIGALLVMK-D-EKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQ 83 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCS
T ss_pred eHHHHHhcCCCCcEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCC
Confidence 899999966 6889999999999 999999999999999998 4 89999999999985 221 1246899999999
Q ss_pred CcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 281 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 281 v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+.++++++++.++++.|.+++.+.+||+|+
T Consensus 84 ~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 113 (135)
T 2rc3_A 84 VAYVDLNNTNEDCMALITEMRVRHLPVLDD 113 (135)
T ss_dssp CCCBCTTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred CeEECCCCcHHHHHHHHHHhCCCEEEEEeC
Confidence 999999999999999999999999999986
No 30
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.73 E-value=1e-17 Score=150.20 Aligned_cols=102 Identities=9% Similarity=0.153 Sum_probs=91.7
Q ss_pred cccccccccC----ccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc-----cccchhhh
Q 011545 206 KTAKDAMTPI----SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPLRKM 276 (483)
Q Consensus 206 ~tV~dIMtPr----~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~-----~~~~V~dI 276 (483)
.+|+|+|+|+ ++++++++++++. ++++.|.+++++++||.+ + ++++|+|+.+|+++.... ...+++++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~V~~-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 83 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVY-DAIKLMAEKGIGALLVVD-G-DDIAGIVTERDYARKVVLQERSSKATRVEEI 83 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHH-HHHHHHHHHTCSEEEEES-S-SSEEEEEEHHHHHHHSGGGTCCSSSCBHHHH
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHH-HHHHHHHHcCCCEEEEee-C-CEEEEEEEHHHHHHHHHhccCCccccCHHHH
Confidence 5799999987 6789999999999 999999999999999965 3 899999999999875322 24689999
Q ss_pred hccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 277 IIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 277 M~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 84 m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 117 (157)
T 4fry_A 84 MTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDG 117 (157)
T ss_dssp SBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 9999999999999999999999999999999986
No 31
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.72 E-value=2.6e-17 Score=143.82 Aligned_cols=104 Identities=13% Similarity=0.277 Sum_probs=92.1
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhh-hccccc---cccchhhhhc
Q 011545 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNL-LSVDYR---DAVPLRKMII 278 (483)
Q Consensus 203 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDL-l~~~~~---~~~~V~dIM~ 278 (483)
+.+.+|+++|++ ++.++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+ ++.... ...++.++|.
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 80 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVV-EAFEKMLKYKISSLPVIDDE-NKVIGIVTTTDIGYNLIRDKYTLETTIGDVMT 80 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHH-HHHHHHHHHTCCEEEEECTT-CBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSC
T ss_pred cccCCHHHhhcC--CceEECCCCcHH-HHHHHHHHCCCcEEEEECCC-CeEEEEEEHHHHHHHHHhhcccCCcCHHHHhC
Confidence 568899999985 678899999999 99999999999999999865 899999999999 765332 2468999998
Q ss_pred cCCcEecCCCCHHHHHHHhHhcC-----CcEEEEEec
Q 011545 279 RRIPRVSEDMPLYDILNEFQKGH-----SHIAVVYKD 310 (483)
Q Consensus 279 r~v~~V~~~~~l~daL~~m~~~~-----~~~apVVDe 310 (483)
+++.++++++++.++++.|.+++ .+.+||+|+
T Consensus 81 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~ 117 (138)
T 2p9m_A 81 KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDK 117 (138)
T ss_dssp SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECT
T ss_pred CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECC
Confidence 89999999999999999999999 999999997
No 32
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.71 E-value=2.1e-17 Score=145.56 Aligned_cols=100 Identities=11% Similarity=0.126 Sum_probs=90.3
Q ss_pred cccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCC--cEEEEEEchhhhccccc---cccchhhhhccC
Q 011545 206 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPT--NIIGLILVKNLLSVDYR---DAVPLRKMIIRR 280 (483)
Q Consensus 206 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d--~iVGIVs~kDLl~~~~~---~~~~V~dIM~r~ 280 (483)
.+|+++|++ +++++++++++. ++++.|.+++++++||++++ + +++|+|+.+|+++.... ...++.++|.++
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 80 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIR-EVATELAKNRVGLAVLTARD-NPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSP 80 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHH-HHHHHHHHHTCSEEEEEETT-EEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBCC
T ss_pred eEHHHHhcC--CCeEeCCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCCC
Confidence 689999985 788999999999 99999999999999999875 6 89999999999876422 246899999999
Q ss_pred CcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 281 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 281 v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+.+++++ ++.++++.|.+++.+.+||+|+
T Consensus 81 ~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~ 109 (141)
T 2rih_A 81 ITVLDTD-PVHVAAEKMRRHNIRHVVVVNK 109 (141)
T ss_dssp CEEETTS-BHHHHHHHHHHHTCSEEEEECT
T ss_pred CeEEcCC-CHHHHHHHHHHcCCeEEEEEcC
Confidence 9999999 9999999999999999999997
No 33
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.70 E-value=3.3e-17 Score=164.28 Aligned_cols=122 Identities=12% Similarity=0.153 Sum_probs=105.0
Q ss_pred CCCHHHHHHHHHHhcCc-ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccc
Q 011545 188 DLTHDETTIIAGALELT-EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (483)
Q Consensus 188 ~L~~eE~~~I~~vl~l~-~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~ 266 (483)
.++++|+++++++++|- +.+|+|+|+|+.++++++.++|+. ++++.|.+++++++||++++.++++|+|+.+|++...
T Consensus 3 ~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~-~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~ 81 (334)
T 2qrd_G 3 DVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVK-TSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVI 81 (334)
T ss_dssp SHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHH-HHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHH
Confidence 45678899999999954 599999999999999999999999 9999999999999999987667999999999998643
Q ss_pred c--------cc------ccchh-------hhhccCC--cEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 267 Y--------RD------AVPLR-------KMIIRRI--PRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 267 ~--------~~------~~~V~-------dIM~r~v--~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
. .. ..++. ++|.+++ .++++++++.++++.|.+++.+.+||+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 148 (334)
T 2qrd_G 82 KYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDV 148 (334)
T ss_dssp HHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEE
T ss_pred HHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeC
Confidence 1 11 22333 3467777 89999999999999999999999999998
No 34
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.70 E-value=4.8e-17 Score=146.72 Aligned_cols=103 Identities=17% Similarity=0.252 Sum_probs=91.9
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccc----ccccchhhhhc
Q 011545 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY----RDAVPLRKMII 278 (483)
Q Consensus 203 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~----~~~~~V~dIM~ 278 (483)
+..++|+++|++ . +++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+++... ....++.++|.
T Consensus 14 l~~~~v~~im~~--~-~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 88 (159)
T 3fv6_A 14 LKKLQVKDFQSI--P-VVIHENVSVY-DAICTMFLEDVGTLFVVDRD-AVLVGVLSRKDLLRASIGQQELTSVPVHIIMT 88 (159)
T ss_dssp HTTCBGGGSCBC--C-CEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSE
T ss_pred HhhCCHHHHcCC--C-EEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHhhccCcccCcCHHHHHc
Confidence 367899999984 3 4899999999 99999999999999999865 89999999999987542 13468999998
Q ss_pred c--CCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 279 R--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 279 r--~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+ ++.+|++++++.++++.|.+++.+.+||+|+
T Consensus 89 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 122 (159)
T 3fv6_A 89 RMPNITVCRREDYVMDIAKHLIEKQIDALPVIKD 122 (159)
T ss_dssp ETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEE
T ss_pred CCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeC
Confidence 7 8899999999999999999999999999998
No 35
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.70 E-value=4e-17 Score=139.98 Aligned_cols=100 Identities=16% Similarity=0.216 Sum_probs=89.6
Q ss_pred cccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc----cccchhhhhccCC
Q 011545 206 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----DAVPLRKMIIRRI 281 (483)
Q Consensus 206 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~----~~~~V~dIM~r~v 281 (483)
++|+++|++ ++.++++++++. ++++.|.+++++++||+| + ++++|+|+.+|+++.... ...++.++|.+++
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~ 75 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLE-DVLRNYVENAKGSSVVVK-E-GVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDL 75 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHH-HHHHHHHHHCCCEEEEEE-T-TEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGG
T ss_pred CCHHHhcCC--CceEECCCCcHH-HHHHHHHHcCCCEEEEEe-C-CeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCC
Confidence 478999985 778899999999 999999999999999998 4 899999999999865322 2468999998999
Q ss_pred cEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 282 PRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 282 ~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.++++++++.++++.|.+++.+.+||+|+
T Consensus 76 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~ 104 (125)
T 1pbj_A 76 VTISPRATIKEAAEKMVKNVVWRLLVEED 104 (125)
T ss_dssp GEECTTSCHHHHHHHHHHHTCSEEEEEET
T ss_pred eEECCCCCHHHHHHHHHhcCCcEEEEEEC
Confidence 99999999999999999999999999987
No 36
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.69 E-value=7e-17 Score=145.19 Aligned_cols=103 Identities=20% Similarity=0.247 Sum_probs=92.3
Q ss_pred cCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcc-cccccCCCCcEEEEEEchhhhccc--------------
Q 011545 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSR-VPVYSGNPTNIIGLILVKNLLSVD-------------- 266 (483)
Q Consensus 202 ~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sr-lPVvd~d~d~iVGIVs~kDLl~~~-------------- 266 (483)
.+...+|+++|++ +++++++++|+. ++++.|.++++++ +||+|++ +++|+|+.+||++..
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~-ea~~~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~~~~~~~~~~~~~~ 86 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIE-EIVDRILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSGFHFFGFIPKEELI 86 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHH-HHHHHHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHHHHHHCCCC-----
T ss_pred hhccccHhhcccC--CCceECCCCCHH-HHHHHHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHhhhHHhhhccHHHH
Confidence 5778899999985 789999999999 9999999999999 9999864 899999999998742
Q ss_pred -----cccccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 267 -----YRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 267 -----~~~~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.....+++++|.+ +++|++++++.++++.|.+++.+.+||+|+
T Consensus 87 ~~~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 134 (157)
T 1o50_A 87 RSSMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDE 134 (157)
T ss_dssp --CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHHHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcC
Confidence 1234689999888 999999999999999999999999999997
No 37
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.69 E-value=4e-17 Score=150.93 Aligned_cols=101 Identities=19% Similarity=0.275 Sum_probs=91.6
Q ss_pred cccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccc-----ccccchhhhhccC
Q 011545 206 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY-----RDAVPLRKMIIRR 280 (483)
Q Consensus 206 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~-----~~~~~V~dIM~r~ 280 (483)
.+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+||+.... ....+++++|.++
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~-ea~~~~~~~~~~~~pVvd~~-g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~ 84 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVF-DAVKIMNENHLYGLVVKDDN-GNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKP 84 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSS
T ss_pred cCHHHhcCC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCC
Confidence 789999984 788999999999 99999999999999999865 89999999999987543 2346899999889
Q ss_pred CcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 281 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 281 v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+.+|++++++.++++.|.+++.+.+||+|+
T Consensus 85 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 114 (184)
T 1pvm_A 85 IPKVKSDYDVKDVAAYLSENGLERCAVVDD 114 (184)
T ss_dssp CCEEETTCBHHHHHHHHHHHTCSEEEEECT
T ss_pred CcEECCCCCHHHHHHHHHHcCCcEEEEEcC
Confidence 999999999999999999999999999998
No 38
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.69 E-value=6.7e-17 Score=141.75 Aligned_cols=105 Identities=15% Similarity=0.221 Sum_probs=90.2
Q ss_pred cCccccccc---ccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc-----cccch
Q 011545 202 ELTEKTAKD---AMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPL 273 (483)
Q Consensus 202 ~l~~~tV~d---IMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~-----~~~~V 273 (483)
++-+.++++ +|+ .+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+++.... ...++
T Consensus 4 ~~~~~~v~~~~~~~~--~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v 79 (144)
T 2nyc_A 4 HFLKIPIGDLNIITQ--DNMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSV 79 (144)
T ss_dssp GGGGSBGGGSSCCBC--SSCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHTC----CCSBH
T ss_pred chhhcchhhcCCCCC--CCceEECCCCcHH-HHHHHHHHcCcceeeEEcCC-CcEEEEEcHHHHHHHhcccccccCCccH
Confidence 345678888 776 4788999999999 99999999999999999865 899999999999875432 24689
Q ss_pred hhhhcc------CCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 274 RKMIIR------RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 274 ~dIM~r------~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.++|.+ ++.++++++++.++++.|.+++.+.+||+|+
T Consensus 80 ~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 122 (144)
T 2nyc_A 80 GEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD 122 (144)
T ss_dssp HHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECC
Confidence 999876 6889999999999999999999999999997
No 39
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.69 E-value=3.7e-17 Score=142.14 Aligned_cols=104 Identities=14% Similarity=0.213 Sum_probs=90.5
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhh-ccccc----cccchhhhh
Q 011545 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL-SVDYR----DAVPLRKMI 277 (483)
Q Consensus 203 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl-~~~~~----~~~~V~dIM 277 (483)
+.-.+|+++|++ +++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|++ +.... ...++.++|
T Consensus 5 ~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m 80 (133)
T 1y5h_A 5 FTMTTARDIMNA--GVTCVGEHETLT-AAAQYMREHDIGALPICGDD-DRLHGMLTDRDIVIKGLAAGLDPNTATAGELA 80 (133)
T ss_dssp ---CCHHHHSEE--TCCCEETTSBHH-HHHHHHHHHTCSEEEEECGG-GBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHH
T ss_pred hhhcCHHHHhcC--CceEeCCCCCHH-HHHHHHHHhCCCeEEEECCC-CeEEEEEeHHHHHHHHHhcCCCccccCHHHHh
Confidence 344689999985 678899999999 99999999999999999765 8999999999998 34322 246899999
Q ss_pred ccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 278 IRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 278 ~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 81 ~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 113 (133)
T 1y5h_A 81 RDSIYYVDANASIQEMLNVMEEHQVRRVPVISE 113 (133)
T ss_dssp TTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET
T ss_pred cCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC
Confidence 899999999999999999999999999999997
No 40
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.69 E-value=5.1e-17 Score=148.94 Aligned_cols=106 Identities=19% Similarity=0.240 Sum_probs=92.2
Q ss_pred CcccccccccccCcc--EEEE--eCCCChHHHHHHHHHHcCCcccccc--cCCCCcEEEEEEchhhhcccc---------
Q 011545 203 LTEKTAKDAMTPISK--AFSL--DLDATLTLDTLNAIMTMGHSRVPVY--SGNPTNIIGLILVKNLLSVDY--------- 267 (483)
Q Consensus 203 l~~~tV~dIMtPr~~--VvtV--~~d~tv~~eal~~m~~~~~srlPVv--d~d~d~iVGIVs~kDLl~~~~--------- 267 (483)
+...+|+++|++..+ ++++ ++++++. ++++.|.+++++++||+ +++ ++++|+|+.+|+++...
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~-~a~~~~~~~~~~~~pVv~~d~~-~~lvGiit~~dl~~~~~~~~~~~~~~ 85 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVE-DVETIISETTYSGFPVVVSRES-QRLVGFVLRRDLIISIENARKKQDGV 85 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHH-HHHHHHHHCCCSEEEEESCTTT-CBEEEEEEHHHHHHHHHHHHTSCSCC
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHH-HHHHHHHhcCCCceeEEEECCC-CeEEEEEEHHHHHHHHHhhcccCCCc
Confidence 367899999997543 6778 9999999 99999999999999999 444 89999999999986532
Q ss_pred -------------------ccccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 268 -------------------RDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 268 -------------------~~~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
....++.++|.+++++|++++++.++++.|.+++.+.+||+|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~ 147 (185)
T 2j9l_A 86 VSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHN 147 (185)
T ss_dssp CTTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred cccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEEC
Confidence 1246799999899999999999999999999999999999986
No 41
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.69 E-value=6e-17 Score=145.38 Aligned_cols=110 Identities=12% Similarity=0.154 Sum_probs=92.6
Q ss_pred HHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccC-CCCcEEEEEEchhhhccccc--------
Q 011545 198 AGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSG-NPTNIIGLILVKNLLSVDYR-------- 268 (483)
Q Consensus 198 ~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~-d~d~iVGIVs~kDLl~~~~~-------- 268 (483)
.+.+.+...+|+++|++ +++++++++++. ++++.|.+++++++||+|+ +.++++|+|+.+|++.....
T Consensus 5 ~~~~~~~~~~v~dim~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~ 81 (164)
T 2pfi_A 5 GRNIGSHHVRVEHFMNH--SITTLAKDTPLE-EVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPG 81 (164)
T ss_dssp -----CCSCBHHHHCBC--CCCCEETTCBHH-HHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------C
T ss_pred cccccccCCCHHHHcCC--CCeEECCCCcHH-HHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCc
Confidence 44566788999999986 778899999999 9999999999999999986 24899999999999875422
Q ss_pred cccchhhhhccC------CcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 269 DAVPLRKMIIRR------IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 269 ~~~~V~dIM~r~------v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
...++.++|.++ +.++++++++.++++.|.+++.+.+||+|+
T Consensus 82 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 129 (164)
T 2pfi_A 82 HQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSR 129 (164)
T ss_dssp CCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEET
T ss_pred ccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEEC
Confidence 125789998776 789999999999999999999999999996
No 42
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.68 E-value=6.7e-17 Score=146.11 Aligned_cols=103 Identities=19% Similarity=0.236 Sum_probs=92.0
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccc------------cccc
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY------------RDAV 271 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~------------~~~~ 271 (483)
...+|+++|++ +++++++++|+. ++++.|.+++++++||+|++ ++++|+|+.+||++... ....
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~ 78 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLN-DAKHLMEALDIRHVPIVDAN-KKLLGIVSQRDLLAAQESSLQRSAQGDSLAFET 78 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHHHCC---------CCC
T ss_pred CcCcHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHHhhcccccccchhccc
Confidence 45789999985 778899999999 99999999999999999865 89999999999986532 1246
Q ss_pred chhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 272 PLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 272 ~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
++.++|.+++.+|++++++.++++.|.+++.+.+||+|+
T Consensus 79 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 117 (160)
T 2o16_A 79 PLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK 117 (160)
T ss_dssp BHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET
T ss_pred CHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC
Confidence 899999889999999999999999999999999999987
No 43
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.67 E-value=1.4e-16 Score=142.38 Aligned_cols=103 Identities=14% Similarity=0.170 Sum_probs=90.1
Q ss_pred cCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccccc-----ccchhhh
Q 011545 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-----AVPLRKM 276 (483)
Q Consensus 202 ~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~-----~~~V~dI 276 (483)
.+.+.+|+++ .+++++++++++. ++++.|.+++++.+||+|++ ++++|+|+.+|+++..... ..++.++
T Consensus 19 ~l~~~~v~~~----~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~ 92 (152)
T 2uv4_A 19 SLEELQIGTY----ANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKA 92 (152)
T ss_dssp BHHHHTCSBC----SSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEHHHHHHHHHCSSCCCTTSBGGGG
T ss_pred hHHHccCCcc----CCceEeCCCCcHH-HHHHHHHHcCCceEeEECCC-CcEEEEEeHHHHHHHhcchhhhhhcchHHHH
Confidence 3466788888 3678899999999 99999999999999999875 8999999999998764322 3578999
Q ss_pred hc------cCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 277 II------RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 277 M~------r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
|. +++.++++++++.++++.|.+++.+.+||+|+
T Consensus 93 m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 132 (152)
T 2uv4_A 93 LQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDE 132 (152)
T ss_dssp GGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECC
Confidence 85 78999999999999999999999999999997
No 44
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.67 E-value=5.6e-17 Score=161.91 Aligned_cols=125 Identities=12% Similarity=0.218 Sum_probs=106.6
Q ss_pred cCCCCCHHHHHHHHHHhcC-cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhh
Q 011545 185 KGGDLTHDETTIIAGALEL-TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL 263 (483)
Q Consensus 185 e~G~L~~eE~~~I~~vl~l-~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl 263 (483)
+.|.++++|+++++++++| .+.+|+|+|+|+.++++++.++|+. +|++.|.+++++++||++++.++++|+++.+|++
T Consensus 8 ~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~-~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~ 86 (323)
T 3t4n_C 8 SQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVK-KSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFI 86 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHH-HHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHH-HHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHH
Confidence 4567889999999999998 9999999999999999999999999 9999999999999999997657999999999998
Q ss_pred cccc------c--------cccchhhh------hccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 264 SVDY------R--------DAVPLRKM------IIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 264 ~~~~------~--------~~~~V~dI------M~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.... . ....++++ |.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 153 (323)
T 3t4n_C 87 NVIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQ 153 (323)
T ss_dssp HHHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEec
Confidence 6421 0 01233444 4678899999999999999999999999999998
No 45
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.67 E-value=4.9e-17 Score=163.01 Aligned_cols=124 Identities=12% Similarity=0.269 Sum_probs=100.2
Q ss_pred ccCCCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhh
Q 011545 184 GKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL 263 (483)
Q Consensus 184 ~e~G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl 263 (483)
.++|.+.+.+++.+++.| .+.+|+|+|+|+.++++++.++|+. ++++.|.+++++++||++++.++++|+|+.+|++
T Consensus 15 ~~~~~~~~~~~~~~~~~l--~~~~v~dim~p~~~v~~v~~~~~v~-~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll 91 (330)
T 2v8q_E 15 EHSQETPESNSSVYTTFM--KSHRCYDLIPTSSKLVVFDTSLQVK-KAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFI 91 (330)
T ss_dssp --------CCSCHHHHHH--HHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHH
T ss_pred hHhhhccchhhHHHHHHH--HcCcHhhhccCCCcEEEEeCCCcHH-HHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHH
Confidence 445677777777788875 7889999999999999999999999 9999999999999999987657899999999998
Q ss_pred ccccc------------cccc-------hhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 264 SVDYR------------DAVP-------LRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 264 ~~~~~------------~~~~-------V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
..... ...+ ++++|.+++.+|++++++.++++.|.+++.+.+||+|+
T Consensus 92 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 157 (330)
T 2v8q_E 92 NILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDP 157 (330)
T ss_dssp HHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECT
T ss_pred HHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeC
Confidence 64211 0112 24567889999999999999999999999999999986
No 46
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.63 E-value=1.8e-15 Score=143.83 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=91.0
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccccccchhhhhccCCcE
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPR 283 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~r~v~~ 283 (483)
..-+++++|++ +++++++++|+. ++++.|.+++++++||+|++ ++++|+|+.+|+++... ..+++++|.+++.+
T Consensus 11 ~~~~~~~~~~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~l~Givt~~dl~~~~~--~~~v~~im~~~~~~ 84 (213)
T 1vr9_A 11 HHMKVKKWVTQ--DFPMVEESATVR-ECLHRMRQYQTNECIVKDRE-GHFRGVVNKEDLLDLDL--DSSVFNKVSLPDFF 84 (213)
T ss_dssp --CBGGGGCBS--CSCEEETTCBHH-HHHHHHHHTTSSEEEEECTT-SBEEEEEEGGGGTTSCT--TSBSGGGCBCTTCC
T ss_pred cccCHHHhhcC--CCeEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CEEEEEEEHHHHHhhcC--CCcHHHHccCCCEE
Confidence 34578999984 778999999999 99999999999999999865 89999999999987654 35899999999999
Q ss_pred ecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 284 VSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 284 V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+++++++.++++.|.+++.+.+||+|+
T Consensus 85 v~~~~~l~~a~~~m~~~~~~~lpVvd~ 111 (213)
T 1vr9_A 85 VHEEDNITHALLLFLEHQEPYLPVVDE 111 (213)
T ss_dssp EETTSBHHHHHHHHHHCCCSEEEEECT
T ss_pred ECCCCcHHHHHHHHHHhCCCEEEEEcC
Confidence 999999999999999999999999997
No 47
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.63 E-value=1.2e-15 Score=150.30 Aligned_cols=130 Identities=15% Similarity=0.225 Sum_probs=108.5
Q ss_pred ccCHHHHHHHHhhhccccccCCCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCccccc
Q 011545 166 LLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPV 245 (483)
Q Consensus 166 ~~s~eEL~~Lv~~~~~e~~e~G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPV 245 (483)
.+|..||...+.. +... .+...+.+.+.+.+|+++|++ +++++++++++. ++++.|.+++++++||
T Consensus 64 ivT~~Di~~~~~~----~~~~-------~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpV 129 (296)
T 3ddj_A 64 LLTTRDLLSTVES----YCKD-------SCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEF-TAINIMVTRNFGSLPV 129 (296)
T ss_dssp EEEHHHHHGGGTT----CC----------CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHH-HHHHHHHHHTCSEEEE
T ss_pred EEeHHHHHHHhcc----cccc-------cccchhhHHHhcccHHHhccC--CCEEEcCCCCHH-HHHHHHHHcCCCEEEE
Confidence 5678888776631 1100 345566667778999999996 678899999999 9999999999999999
Q ss_pred ccCCCCcEEEEEEchhhhccccc--cccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 246 YSGNPTNIIGLILVKNLLSVDYR--DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 246 vd~d~d~iVGIVs~kDLl~~~~~--~~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+|++ ++++|+++.+|+++.... ...++.++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 130 vd~~-~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~ 195 (296)
T 3ddj_A 130 VDIN-DKPVGIVTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDD 195 (296)
T ss_dssp ECTT-SCEEEEEEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred EcCC-CcEEEEEeHHHHHHhhhcccccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC
Confidence 9875 899999999999876432 245899999999999999999999999999999999999997
No 48
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.61 E-value=2.4e-15 Score=150.08 Aligned_cols=105 Identities=15% Similarity=0.233 Sum_probs=93.1
Q ss_pred cCcccccccc---cccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccccc-----ccch
Q 011545 202 ELTEKTAKDA---MTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-----AVPL 273 (483)
Q Consensus 202 ~l~~~tV~dI---MtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~-----~~~V 273 (483)
.+.+.+|+++ |+ .+++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++..... ..++
T Consensus 183 ~~~~~~v~~~~~~m~--~~~~~v~~~~~~~-~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~v 258 (323)
T 3t4n_C 183 HFLKIPIGDLNIITQ--DNMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSV 258 (323)
T ss_dssp GGCCSBGGGTTCSBC--TTCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEETTHHHHHHHTTHHHHTTSBH
T ss_pred hhhhCcHHHcCCCCC--CCcEEECCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEeHHHHHHHHhhchhhhccCCH
Confidence 3556789999 76 4788999999999 99999999999999999875 8999999999998764332 4589
Q ss_pred hhhhcc------CCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 274 RKMIIR------RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 274 ~dIM~r------~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+++|.+ ++.++++++++.++++.|.+++.+.+||+|+
T Consensus 259 ~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 301 (323)
T 3t4n_C 259 GEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD 301 (323)
T ss_dssp HHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECT
T ss_pred HHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECC
Confidence 999887 7899999999999999999999999999997
No 49
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.60 E-value=4e-16 Score=171.67 Aligned_cols=105 Identities=17% Similarity=0.053 Sum_probs=92.1
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHH-HcCCcccccccCCCCcEEEEEEchhhhcccccc-------------
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIM-TMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD------------- 269 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~-~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~------------- 269 (483)
.+++|+|+|+|+++++++++++|++ |+.+.|. +++++++||+|++ ++++|+|+.+|+++.....
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~-e~~~~~~~~~~~~~~PVvd~~-~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~ 528 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQ-HIKGILEKFPNRLVFPVIDAN-GYLLGAISRKEIVDRLQHVLEDVPEPIAGHRT 528 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHH-HHHHHHHHSTTCCEECBBCTT-CBBCCEESHHHHTTTTTTC-------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHH-HHHHHHHhcCCcceEEEEecC-CeEEEEEEHHHHHHHHHHHhhhcccccccccc
Confidence 6789999999999999999999999 9999999 7999999999875 8999999999998753221
Q ss_pred --------------------------------------ccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 270 --------------------------------------AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 270 --------------------------------------~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
..+++++|++++.+|++++++.++++.|++++.+++||+|+
T Consensus 529 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve~ 607 (632)
T 3org_A 529 LVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTER 607 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEET
T ss_pred eeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEEC
Confidence 00277899999999999999999999999999999999943
No 50
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.60 E-value=2.5e-15 Score=160.28 Aligned_cols=131 Identities=9% Similarity=0.166 Sum_probs=110.5
Q ss_pred ccCHHHHHHHHhhhccccccCCCCC-----HHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCC
Q 011545 166 LLRRAELKTFVNFHGNEAGKGGDLT-----HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGH 240 (483)
Q Consensus 166 ~~s~eEL~~Lv~~~~~e~~e~G~L~-----~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~ 240 (483)
.++++||...+...+ ..|.|. +++++++++++.+ +++|++ +++++++++++. ++++.|.++++
T Consensus 54 ~vt~~eLa~av~~~G----g~G~i~~~~~~e~~~~~i~~v~~~-----~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~ 121 (491)
T 1zfj_A 54 TVTGSKMAIAIARAG----GLGVIHKNMSITEQAEEVRKVKRS-----ENGVII--DPFFLTPEHKVS-EAEELMQRYRI 121 (491)
T ss_dssp TTCSHHHHHHHHHTT----CEEEECCSSCHHHHHHHHHHHHHH-----TTTTSS--SCCCBCSSSBHH-HHHHHHHHTTC
T ss_pred hccHHHHHHHHHHcC----CceEEeCCCCHHHHHHHHHHHhhH-----HhcCcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 467789998876322 223343 6778889888754 789996 788899999999 99999999999
Q ss_pred ccccccc--CCCCcEEEEEEchhhhccccccccchhhhhcc-CCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 241 SRVPVYS--GNPTNIIGLILVKNLLSVDYRDAVPLRKMIIR-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 241 srlPVvd--~d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~r-~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+++||++ ++ ++++|+|+.+|++... ..+.+++++|.+ ++++|++++++.++++.|.+++.+.+||||+
T Consensus 122 ~~~pVvd~~~~-~~lvGivt~~Dl~~~~-~~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~ 192 (491)
T 1zfj_A 122 SGVPIVETLAN-RKLVGIITNRDMRFIS-DYNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDN 192 (491)
T ss_dssp SEEEEESCTTT-CBEEEEEEHHHHHHCS-CSSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECT
T ss_pred CEEEEEEeCCC-CEEEEEEEHHHHhhhc-cCCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC
Confidence 9999998 54 8999999999998653 345689999887 8999999999999999999999999999998
No 51
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.60 E-value=1.6e-15 Score=149.43 Aligned_cols=104 Identities=13% Similarity=0.203 Sum_probs=93.1
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc----------cccc
Q 011545 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----------DAVP 272 (483)
Q Consensus 203 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~----------~~~~ 272 (483)
....+|+++|++ +++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|++..... ...+
T Consensus 153 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 228 (296)
T 3ddj_A 153 DEIFPVKVFMST--KVQTIYKEVRLD-QAVKLMLRRGFRRLPVIDDD-NKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKV 228 (296)
T ss_dssp CCCCBHHHHSBC--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCB
T ss_pred cccccHHHhhcC--CCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHHHhhcChhhhcCcC
Confidence 346689999984 778899999999 99999999999999999865 899999999999876431 2468
Q ss_pred hhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 273 LRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 273 V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+.++|.+++.+|++++++.++++.|.+++.+.+||+|+
T Consensus 229 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~ 266 (296)
T 3ddj_A 229 VKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNK 266 (296)
T ss_dssp HHHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECC
Confidence 99999999999999999999999999999999999997
No 52
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.59 E-value=1.8e-15 Score=145.93 Aligned_cols=102 Identities=17% Similarity=0.243 Sum_probs=90.1
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc----------------
Q 011545 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---------------- 268 (483)
Q Consensus 205 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~---------------- 268 (483)
..+|+|+|++ +++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++....
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLK-MAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIWDSNILAKSATSLDN 81 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHH
Confidence 4689999985 678999999999 99999999999999999875 899999999999864210
Q ss_pred --------------------------------------------------------------------------------
Q 011545 269 -------------------------------------------------------------------------------- 268 (483)
Q Consensus 269 -------------------------------------------------------------------------------- 268 (483)
T Consensus 82 v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~ 161 (245)
T 3l2b_A 82 ILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAK 161 (245)
T ss_dssp HHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHH
T ss_pred HHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH
Confidence
Q ss_pred ---------------------cccchhhhhc-cCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 269 ---------------------DAVPLRKMII-RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 269 ---------------------~~~~V~dIM~-r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
...+++++|. +++.++++++++.++++.|.+++.+.+||+|+
T Consensus 162 ~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~ 225 (245)
T 3l2b_A 162 KNNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDE 225 (245)
T ss_dssp HHTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECT
T ss_pred HcCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcC
Confidence 0235889998 89999999999999999999999999999998
No 53
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.58 E-value=3.9e-15 Score=144.44 Aligned_cols=134 Identities=12% Similarity=0.209 Sum_probs=104.8
Q ss_pred ccCHHHHHHHHhhhccccccCCCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCccccc
Q 011545 166 LLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPV 245 (483)
Q Consensus 166 ~~s~eEL~~Lv~~~~~e~~e~G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPV 245 (483)
.+|..||...+.. +...+.+. .....+++...+.+|+++|++ +++++++++++. ++++.|.+++++++||
T Consensus 51 ivt~~di~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~V 120 (280)
T 3kh5_A 51 IITSMDIVDFMGG----GSKYNLIR---EKHERNFLAAINEPVREIMEE--NVITLKENADID-EAIETFLTKNVGGAPI 120 (280)
T ss_dssp EEEHHHHHHHTTT----SGGGHHHH---TTSTTCHHHHTTSBGGGTSBC--SCCCEETTCBHH-HHHHHHHHTTCSEEEE
T ss_pred EEEHHHHHHHhcc----cchhhhhh---hccccchhHHhhhhHHHhcCC--CCEEECCCCCHH-HHHHHHHhCCCCEEEE
Confidence 5678888876641 11111111 111222333347899999996 778999999999 9999999999999999
Q ss_pred ccCCCCcEEEEEEchhhhccccc---cccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 246 YSGNPTNIIGLILVKNLLSVDYR---DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 246 vd~d~d~iVGIVs~kDLl~~~~~---~~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+|++ ++++|+++.+|+++.... ...+++++|.+++.++++++++.++++.|.+++.+.+||+++
T Consensus 121 vd~~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~~ 187 (280)
T 3kh5_A 121 VNDE-NQLISLITERDVIRALLDKIDENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVVSE 187 (280)
T ss_dssp ECTT-CBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred EcCC-CEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 9876 899999999999876432 234799999899999999999999999999999999999954
No 54
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.58 E-value=4.9e-15 Score=159.21 Aligned_cols=135 Identities=10% Similarity=0.168 Sum_probs=106.9
Q ss_pred ccCHHHHHHHHhhhccccccCCCCC-HHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccc
Q 011545 166 LLRRAELKTFVNFHGNEAGKGGDLT-HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVP 244 (483)
Q Consensus 166 ~~s~eEL~~Lv~~~~~e~~e~G~L~-~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlP 244 (483)
.+|++++...+...+.-+-=...+. +++.++++.++. ++++|++ +++++++++|+. ++++.|.+++++++|
T Consensus 77 tvTe~~lAia~a~~GgiGvIh~~~~~~~q~~~V~~V~~-----~~~~m~~--d~v~l~~~~tv~-ea~~~m~~~~~s~~p 148 (511)
T 3usb_A 77 TVTEADMAIAMARQGGLGIIHKNMSIEQQAEQVDKVKR-----SESGVIS--DPFFLTPEHQVY-DAEHLMGKYRISGVP 148 (511)
T ss_dssp TTCSHHHHHHHHHHTCEEEECSSSCHHHHHHHHHHHHT-----SSSCSSS--SCCCBCTTSBHH-HHHHHHHHHCCSEEE
T ss_pred hhcHHHHHHHHHhcCCceeecccCCHHHHHHHHHHhhc-----ccccccc--CCEEECCCCCHH-HHHHHHHHcCCcEEE
Confidence 5678888766543221110011122 455667888864 4577874 778999999999 999999999999999
Q ss_pred cccC--CCCcEEEEEEchhhhccccccccchhhhhcc-CCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 245 VYSG--NPTNIIGLILVKNLLSVDYRDAVPLRKMIIR-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 245 Vvd~--d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~r-~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
|+++ + ++++|+|+.+||+.. .....+|+++|.+ ++++|++++++.++++.|++++.+.+||||+
T Consensus 149 Vvd~g~~-~~lvGiVt~rDl~~~-~~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe 215 (511)
T 3usb_A 149 VVNNLDE-RKLVGIITNRDMRFI-QDYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDN 215 (511)
T ss_dssp EESCTTT-CBEEEEEEHHHHTTC-CCSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECT
T ss_pred EEecCCC-CEEEEEEEehHhhhh-ccCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeC
Confidence 9986 5 899999999999763 3345789999987 8999999999999999999999999999998
No 55
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.58 E-value=6.8e-15 Score=142.77 Aligned_cols=102 Identities=14% Similarity=0.231 Sum_probs=87.9
Q ss_pred ccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccccc-----------------
Q 011545 207 TAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD----------------- 269 (483)
Q Consensus 207 tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~----------------- 269 (483)
+++++|.+ .+++++++++|+. +|++.|.+++++++||++++.++++|+++.+|++......
T Consensus 4 ~v~~~i~~-~~~~~v~~~~sl~-~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~ 81 (280)
T 3kh5_A 4 RVMKIAQN-KKIVTVYPTTTIR-KALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAA 81 (280)
T ss_dssp BGGGTSCC-SCCCCBCTTSBHH-HHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHH
T ss_pred hHHHHhcC-CCcEEECCCCcHH-HHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhHH
Confidence 45554433 3789999999999 9999999999999999986448999999999998754211
Q ss_pred -ccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 270 -AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 270 -~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
..+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 82 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 123 (280)
T 3kh5_A 82 INEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVND 123 (280)
T ss_dssp TTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECT
T ss_pred hhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcC
Confidence 34799999999999999999999999999999999999987
No 56
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.57 E-value=5.7e-16 Score=165.89 Aligned_cols=132 Identities=15% Similarity=0.249 Sum_probs=101.8
Q ss_pred cccCHHHHHHHHhhhccccccCCCC-----CHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcC
Q 011545 165 VLLRRAELKTFVNFHGNEAGKGGDL-----THDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMG 239 (483)
Q Consensus 165 ~~~s~eEL~~Lv~~~~~e~~e~G~L-----~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~ 239 (483)
..+|++++...+...+ .-|.| .++++++++++ ++++++|+ .+++++++++|+. ++++.|.+++
T Consensus 52 dtVTe~~ma~a~a~~G----GiGvI~~n~s~e~qa~~V~~V-----k~~~~~m~--~d~v~v~~~~tv~-ea~~~m~~~~ 119 (496)
T 4fxs_A 52 DTVTEARLAIALAQEG----GIGFIHKNMSIEQQAAQVHQV-----KIFEAGVV--THPVTVRPEQTIA-DVMELTHYHG 119 (496)
T ss_dssp TTTCSHHHHHHHHHHT----CEEEECSSSCHHHHHHHHHHH-----HHCCC--C--BCCCCBCSSSBHH-HHHHHHTSSC
T ss_pred chhhHHHHHHHHHHcC----CcceecCCCCHHHHHHHHHhc-----cccccccc--cCceEECCCCCHH-HHHHHHHHcC
Confidence 3578899987775322 12334 56778999998 45688998 4788999999999 9999999999
Q ss_pred CcccccccCCCCcEEEEEEchhhhccccccccchhhhhc-c-CCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 240 HSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMII-R-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 240 ~srlPVvd~d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~-r-~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
++++||+|++ ++++|+|+.+||+... ....+|.++|. + +++++++++++.++++.|++++.+.+||||+
T Consensus 120 ~s~~PVvd~~-~~lvGiVt~rDL~~~~-~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe 190 (496)
T 4fxs_A 120 FAGFPVVTEN-NELVGIITGRDVRFVT-DLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVND 190 (496)
T ss_dssp CCEEEEECSS-SBEEEEEEHHHHTTCC-CTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECT
T ss_pred CcEEEEEccC-CEEEEEEEHHHHhhcc-cCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC
Confidence 9999999975 8999999999997432 34568999987 4 5899999999999999999999999999998
No 57
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.56 E-value=6.7e-15 Score=144.41 Aligned_cols=61 Identities=15% Similarity=0.140 Sum_probs=53.7
Q ss_pred cCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCC-CCcEEEEEEchhhhcc
Q 011545 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGN-PTNIIGLILVKNLLSV 265 (483)
Q Consensus 202 ~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d-~d~iVGIVs~kDLl~~ 265 (483)
...+++|+|+|++ +++++.+++++. ++.++|.+++++++||++++ .++++|+|+.+||+++
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~-~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~ 70 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYG-DLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGL 70 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHH
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHH
Confidence 3467899999985 889999999999 99999999999999999864 2579999999999753
No 58
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.55 E-value=4.7e-15 Score=159.69 Aligned_cols=103 Identities=13% Similarity=0.172 Sum_probs=89.9
Q ss_pred CcccccccccccCccEEEEeCC-CChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc----cccchhhhh
Q 011545 203 LTEKTAKDAMTPISKAFSLDLD-ATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----DAVPLRKMI 277 (483)
Q Consensus 203 l~~~tV~dIMtPr~~VvtV~~d-~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~----~~~~V~dIM 277 (483)
+.+.+|+++|++ ++++++++ +|+. ++++.|.+++++++||+|++.++++|+|+.+||++.... ...+|.++|
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~-ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im 457 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVG-EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKAL 457 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHH-HHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHH-HHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHh
Confidence 567899999984 78889999 9999 999999999999999998323899999999999865322 246899999
Q ss_pred ccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 278 IRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 278 ~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.+++.+|++++++.++++.|.+++ ++||||+
T Consensus 458 ~~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd~ 488 (527)
T 3pc3_A 458 NKRVIRLNESEILGKLARVLEVDP--SVLILGK 488 (527)
T ss_dssp ETTCCEEETTSBHHHHHHHHTTCS--EEEEEEE
T ss_pred cCCCeEECCCCcHHHHHHHHhhCC--EEEEEeC
Confidence 999999999999999999997765 5799998
No 59
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.54 E-value=1.2e-14 Score=141.51 Aligned_cols=103 Identities=14% Similarity=0.169 Sum_probs=90.2
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhh------cccc----------
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL------SVDY---------- 267 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl------~~~~---------- 267 (483)
.+.+++++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++ +...
T Consensus 124 ~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~ 199 (282)
T 2yzq_A 124 KGVEIEPYYQR--YVSIVWEGTPLK-AALKALLLSNSMALPVVDSE-GNLVGIVDETDLLRDSEIVRIMKSTELAASSEE 199 (282)
T ss_dssp GGCBSTTTSBS--CCCCEETTSBHH-HHHHHHHTCSSSEEEEECTT-SCEEEEEEGGGGGGCGGGCC-------------
T ss_pred ccCcHHHHhCC--CCEEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHhhhhhhhhhhccchhhhhhhh
Confidence 36789999974 678899999999 99999999999999999865 7999999999998 4331
Q ss_pred ------------------ccccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 268 ------------------RDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 268 ------------------~~~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
....+++++|.+++.+|++++++.++++.|.+++.+.+||+|+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 260 (282)
T 2yzq_A 200 EWILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRG 260 (282)
T ss_dssp -------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred hhhcccchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECC
Confidence 0136799999999999999999999999999999999999998
No 60
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.53 E-value=9.1e-15 Score=142.44 Aligned_cols=99 Identities=22% Similarity=0.250 Sum_probs=71.6
Q ss_pred cccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccccccchhhhhccCCcEec
Q 011545 206 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVS 285 (483)
Q Consensus 206 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~r~v~~V~ 285 (483)
++|+++|++ +++++++++|+. ++++.|.+++++++||++++ ++++|+++.+|++.... ..+++++|.+++.+++
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pV~d~~-~~~~Giv~~~dl~~~~~--~~~v~~~m~~~~~~v~ 74 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRN-YALELFKKYKVRSFPVVNKE-GKLVGIISVKRILVNPD--EEQLAMLVKRDVPVVK 74 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC-------------CCEEEEECTT-CCEEEEEESSCC------------CCCBSCCCEEE
T ss_pred CchHHhccC--CCeEECCCCcHH-HHHHHHHHcCCCeEEEEcCC-CcEEEEEEHHHHHhhhc--cCCHHHHcCCCCcEEC
Confidence 478999984 788899999999 99999999999999999864 89999999999987653 3589999888899999
Q ss_pred CCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 286 EDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 286 ~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+++++.++++.|.+++.+.+||+|+
T Consensus 75 ~~~~l~~a~~~m~~~~~~~~~Vvd~ 99 (282)
T 2yzq_A 75 ENDTLKKAAKLMLEYDYRRVVVVDS 99 (282)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred CCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 9999999999999999999999998
No 61
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.51 E-value=6.1e-14 Score=140.48 Aligned_cols=103 Identities=9% Similarity=0.168 Sum_probs=90.2
Q ss_pred cccccccc---cccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc-----cccchhh
Q 011545 204 TEKTAKDA---MTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPLRK 275 (483)
Q Consensus 204 ~~~tV~dI---MtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~-----~~~~V~d 275 (483)
...+|+++ |+ .+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+++.... ...++.+
T Consensus 180 ~~~~v~~l~~~m~--~~~~~v~~~~~~~-~~~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~v~~ 255 (334)
T 2qrd_G 180 LRVPLNQMTIGTW--SNLATASMETKVY-DVIKMLAEKNISAVPIVNSE-GTLLNVYESVDVMHLIQDGDYSNLDLSVGE 255 (334)
T ss_dssp CCCBGGGSSCSBC--SSCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEETHHHHHHHTTSCGGGGGSBHHH
T ss_pred hhCcHHHhCCccc--CCceEECCCCcHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEHHHHHHHhhccccccccCcHHH
Confidence 45788994 87 4778899999999 99999999999999999865 899999999999875432 2467899
Q ss_pred hhcc------CCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 276 MIIR------RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 276 IM~r------~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+|.+ ++.++++++++.++++.|.+++.+.+||+|+
T Consensus 256 ~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 296 (334)
T 2qrd_G 256 ALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDE 296 (334)
T ss_dssp HHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECT
T ss_pred HHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECC
Confidence 9874 8899999999999999999999999999997
No 62
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.50 E-value=2.5e-15 Score=161.19 Aligned_cols=136 Identities=12% Similarity=0.111 Sum_probs=19.8
Q ss_pred ccCHHHHHHHHhhhccccccCCCCC-HHHHHHHHHHhcCcccccccc-cccCccEEEEeCCCChHHHHHHHHHHcCCccc
Q 011545 166 LLRRAELKTFVNFHGNEAGKGGDLT-HDETTIIAGALELTEKTAKDA-MTPISKAFSLDLDATLTLDTLNAIMTMGHSRV 243 (483)
Q Consensus 166 ~~s~eEL~~Lv~~~~~e~~e~G~L~-~eE~~~I~~vl~l~~~tV~dI-MtPr~~VvtV~~d~tv~~eal~~m~~~~~srl 243 (483)
.++++++...+...+..+-=...++ +++++++.++.. .++ |++ +++++++++|+. ++++.|.+++++++
T Consensus 61 ~vt~~~la~~la~~gg~G~I~~~~~~e~~~~~v~~V~~------~e~gM~~--~~~~v~~~~tv~-eal~~m~~~~~s~~ 131 (503)
T 1me8_A 61 SVSGEKMAIALAREGGISFIFGSQSIESQAAMVHAVKN------FKAGFVV--SDSNVKPDQTFA-DVLAISQRTTHNTV 131 (503)
T ss_dssp TTCSHHHHHHHHHTTCEEEECCSSCHHHHHHHHHHHHT------TTC---------------------------------
T ss_pred hhhHHHHHHHHHhCCCcceeeCCCCHHHHHHHHhhhhh------cccCccc--CCeEECCCCcHH-HHHHHHHHcCceEE
Confidence 4577888876653211000000122 466777776654 355 986 889999999999 99999999999999
Q ss_pred ccccCC--CCcEEEEEEchhhhccccccccchhhhhccC--CcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 244 PVYSGN--PTNIIGLILVKNLLSVDYRDAVPLRKMIIRR--IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 244 PVvd~d--~d~iVGIVs~kDLl~~~~~~~~~V~dIM~r~--v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
||+|++ .++++|+|+.+|++........+|+++|.++ +++|++++++.++++.|++++.+.+||||+
T Consensus 132 pVvd~~~~~g~lvGiVt~~Dl~~~~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe 202 (503)
T 1me8_A 132 AVTDDGTPHGVLLGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDD 202 (503)
T ss_dssp -----------------------------------------------------------------------
T ss_pred EEEECCCcCCeEEEEEEHHHHHhhhccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 999864 3799999999999863222346899998876 999999999999999999999999999998
No 63
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.48 E-value=3.6e-15 Score=159.48 Aligned_cols=130 Identities=12% Similarity=0.224 Sum_probs=22.2
Q ss_pred ccCHHHHHHHHhhhccccccCCCCC-----HHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCC
Q 011545 166 LLRRAELKTFVNFHGNEAGKGGDLT-----HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGH 240 (483)
Q Consensus 166 ~~s~eEL~~Lv~~~~~e~~e~G~L~-----~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~ 240 (483)
.+|++++...+...+ .-|.|. +++++++.++. +++++|++ +++++++++|+. +++++|.++++
T Consensus 52 tVTe~~lA~ala~~G----GiGvI~~~~~~e~~a~~v~~vk-----~~~~~m~~--~~v~v~~~~tv~-ea~~~m~~~~~ 119 (490)
T 4avf_A 52 TVTEARLAIAMAQEG----GIGIIHKNMGIEQQAAEVRKVK-----KHETAIVR--DPVTVTPSTKII-ELLQMAREYGF 119 (490)
T ss_dssp TTCSHHHHHHHHHHT----SEEEECCSSCHHHHHHHHHHHH-----HCCC------------------------------
T ss_pred hhCHHHHHHHHHHcC----CCccccCCCCHHHHHHHhhhhc-----ccccCccc--CceEeCCCCcHH-HHHHHHHHhCC
Confidence 467899987765322 122333 56677788774 47889984 788999999999 99999999999
Q ss_pred cccccccCCCCcEEEEEEchhhhccccccccchhhhhc-c-CCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 241 SRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMII-R-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 241 srlPVvd~d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~-r-~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+++||++ + ++++|+|+.+||... .....+|+++|. + +++++++++++.++++.|++++.+.+||||+
T Consensus 120 s~~pVvd-~-g~lvGIVt~rDl~~~-~~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe 188 (490)
T 4avf_A 120 SGFPVVE-Q-GELVGIVTGRDLRVK-PNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDE 188 (490)
T ss_dssp ------------------------------------------------------------------------
T ss_pred CEEEEEE-C-CEEEEEEEhHHhhhc-cccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 9999998 4 899999999999643 233568999987 4 6899999999999999999999999999998
No 64
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.48 E-value=1.8e-13 Score=137.01 Aligned_cols=103 Identities=14% Similarity=0.189 Sum_probs=88.7
Q ss_pred ccccccc--cccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccccc-----ccchhhhh
Q 011545 205 EKTAKDA--MTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-----AVPLRKMI 277 (483)
Q Consensus 205 ~~tV~dI--MtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~-----~~~V~dIM 277 (483)
..+++++ |+ ..+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+++..... ..++.++|
T Consensus 189 ~~~v~~~~v~~-~~~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~ 265 (330)
T 2v8q_E 189 SKSLEELQIGT-YANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 265 (330)
T ss_dssp GSBHHHHTCSB-CSSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHG
T ss_pred cCCHHHhcccC-cCCceEECCCCCHH-HHHHHHHHcCCCeEEEECCC-CcEEEEEEHHHHHHHHhccccccccCcHHHHH
Confidence 3456666 54 24778899999999 99999999999999999865 8999999999999875432 45788887
Q ss_pred ------ccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 278 ------IRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 278 ------~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.+++.+|++++++.++++.|.+++.+.+||+|+
T Consensus 266 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~ 304 (330)
T 2v8q_E 266 QHRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDE 304 (330)
T ss_dssp GGCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred hccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcC
Confidence 478999999999999999999999999999998
No 65
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.48 E-value=5.5e-15 Score=157.81 Aligned_cols=128 Identities=13% Similarity=0.233 Sum_probs=22.4
Q ss_pred ccCHHHHHHHHhhhccccccCCCC----C-HHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCC
Q 011545 166 LLRRAELKTFVNFHGNEAGKGGDL----T-HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGH 240 (483)
Q Consensus 166 ~~s~eEL~~Lv~~~~~e~~e~G~L----~-~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~ 240 (483)
..+..|+...+...+ ..|.+ + +++++++++++++. ++|+ .+++++++++++. ++++.|.++++
T Consensus 57 ~vt~~ela~ava~~G----glG~i~~~~~~e~~~~~I~~v~~~~-----~~m~--~~~~~v~~~~tv~-ea~~~~~~~~~ 124 (486)
T 2cu0_A 57 TVTEWEMAVAMAREG----GLGVIHRNMGIEEQVEQVKRVKRAE-----RLIV--EDVITIAPDETVD-FALFLMEKHGI 124 (486)
T ss_dssp TTCSHHHHHHHHHTT----CEEEECSSSCHHHHHHHHHHHHTCC------------------------------------
T ss_pred eecHHHHHHHHHhcC----CceeecCCCCHHHHHHHHHhhcchh-----hccc--cCceEECCCCCHH-HHHHHHHHcCC
Confidence 456788887775321 12223 3 57789999998764 4687 4889999999999 99999999999
Q ss_pred cccccccCCCCcEEEEEEchhhhccccccccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 241 SRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 241 srlPVvd~d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+++||+++ ++++|+|+.+|++. ....+++++|.+++.++++++++.++++.|++++.+.+||||+
T Consensus 125 ~~~pVvd~--~~lvGivt~~Dl~~---~~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde 189 (486)
T 2cu0_A 125 DGLPVVED--EKVVGIITKKDIAA---REGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDE 189 (486)
T ss_dssp ----------------------------------------------------------------------
T ss_pred cEEEEEEC--CEEEEEEEHHHhcc---CCCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEec
Confidence 99999986 89999999999986 3356899999888999999999999999999999999999998
No 66
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.34 E-value=1.5e-13 Score=146.71 Aligned_cols=112 Identities=10% Similarity=0.193 Sum_probs=7.8
Q ss_pred CCHH-HHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccc
Q 011545 189 LTHD-ETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (483)
Q Consensus 189 L~~e-E~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~ 267 (483)
++.+ .++.+..++ +++++|++ +++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++..
T Consensus 82 ~~~e~~~~~v~~v~-----~~~~iM~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~lvGivt~~Dl~~~~- 151 (494)
T 1vrd_A 82 LTPDEQARQVSIVK-----KTENGIIY--DPITVTPDMTVK-EAIDLMAEYKIGGLPVVDEE-GRLVGLLTNRDVRFEK- 151 (494)
T ss_dssp SCHHHHHHHHHHHH-----TC-----------------------------------------------------------
T ss_pred CChHHHHHHHHhhh-----hHhhcCcc--CCeEECCCCCHH-HHHHHHHHcCceEEEEEcCC-CEEEEEEEHHHHHhhc-
Confidence 4443 345566665 35788985 788999999999 99999999999999999865 7999999999998642
Q ss_pred ccccchhhhhcc--CCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 268 RDAVPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 268 ~~~~~V~dIM~r--~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
....++.++|.+ ++.+|++++++.++++.|.+++.+.+||||+
T Consensus 152 ~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~ 196 (494)
T 1vrd_A 152 NLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSK 196 (494)
T ss_dssp ---------------------------------------------
T ss_pred CCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcC
Confidence 234689999987 8999999999999999999999999999998
No 67
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.24 E-value=1.3e-12 Score=139.02 Aligned_cols=110 Identities=12% Similarity=0.257 Sum_probs=10.5
Q ss_pred HHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCC--CCcEEEEEEchhhhccccc
Q 011545 191 HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGN--PTNIIGLILVKNLLSVDYR 268 (483)
Q Consensus 191 ~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d--~d~iVGIVs~kDLl~~~~~ 268 (483)
+++.++++.+-.++. .|+ .+.+++.++.|+. +++++|.+++++.+||+++. .++++|||+.||+... +
T Consensus 128 e~Qa~~V~~VKr~e~-----g~i--~dPvtl~P~~Tv~-da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~--d 197 (556)
T 4af0_A 128 EEQAAMVRRVKKYEN-----GFI--TDPLCLGPDATVG-DVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ--D 197 (556)
T ss_dssp HHHHHHHHHHHHCCC-----------------------------------------------------------------
T ss_pred HHHHHHHHHHHhccc-----Ccc--CCCeEcCCCCCHH-HHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc--c
Confidence 355788888876654 354 3678999999999 99999999999999999852 3689999999998653 3
Q ss_pred cccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 269 DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 269 ~~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
...+|+++|++++++++++.+++++.+.|.++++..+||||+
T Consensus 198 ~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~ 239 (556)
T 4af0_A 198 AETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDS 239 (556)
T ss_dssp ------------------------------------------
T ss_pred cceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEcc
Confidence 356999999999999999999999999999999999999998
No 68
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.19 E-value=5.1e-13 Score=143.44 Aligned_cols=102 Identities=14% Similarity=0.230 Sum_probs=59.4
Q ss_pred ccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCC--CCcEEEEEEchhhhcccc-ccccchhhhhcc--CC
Q 011545 207 TAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGN--PTNIIGLILVKNLLSVDY-RDAVPLRKMIIR--RI 281 (483)
Q Consensus 207 tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d--~d~iVGIVs~kDLl~~~~-~~~~~V~dIM~r--~v 281 (483)
+++++|++ +++++++++++. ++++.|.+++++++||+|++ .++++|+|+.+|+..... ....+++++|.+ ++
T Consensus 109 ~~~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~~~~~ 185 (514)
T 1jcn_A 109 NFEQGFIT--DPVVLSPSHTVG-DVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIEL 185 (514)
T ss_dssp TCCTTSCS--SCCCCCC------------------CEESCC--------CCEECTTTTC----------------CCBCC
T ss_pred hhhhcccc--CCEEECCCCCHH-HHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCCCCCC
Confidence 68899985 677899999999 99999999999999999863 379999999999986421 234689999988 89
Q ss_pred cEecCCCCHHHHHHHhHhcCCcEEEEEecC
Q 011545 282 PRVSEDMPLYDILNEFQKGHSHIAVVYKDL 311 (483)
Q Consensus 282 ~~V~~~~~l~daL~~m~~~~~~~apVVDe~ 311 (483)
++|++++++.++++.|.+++.+.+||||+.
T Consensus 186 ~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~ 215 (514)
T 1jcn_A 186 VVAPAGVTLKEANEILQRSKKGKLPIVNDC 215 (514)
T ss_dssp CCEETTCCSTTTTTHHHHHTCSCCCEESSS
T ss_pred eEECCCCCHHHHHHHHHHcCCCcccEECCC
Confidence 999999999999999999999999999983
No 69
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.86 E-value=1.9e-09 Score=85.16 Aligned_cols=65 Identities=14% Similarity=0.268 Sum_probs=55.3
Q ss_pred cEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc-----cccchhhhhccCCcEe
Q 011545 217 KAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPLRKMIIRRIPRV 284 (483)
Q Consensus 217 ~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~-----~~~~V~dIM~r~v~~V 284 (483)
+++++++++|+. +|++.|.+++++++||+|+ ++++|+++.+|+++.... .+.+|+++|++++.+|
T Consensus 1 k~vtv~p~~tv~-ea~~~M~~~~i~~~~V~d~--~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 1 KAIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp CEEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CCEEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 367899999999 9999999999999999985 799999999999754321 2468999999988765
No 70
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.61 E-value=3.8e-08 Score=75.80 Aligned_cols=64 Identities=13% Similarity=0.256 Sum_probs=54.5
Q ss_pred EEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc-----cccchhhhhccCCcEe
Q 011545 218 AFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPLRKMIIRRIPRV 284 (483)
Q Consensus 218 VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~-----~~~~V~dIM~r~v~~V 284 (483)
++++++++++. ++++.|.+++++++||+++ ++++|+|+.+|+++.... ...+++++|.+++.+|
T Consensus 2 ~~~v~~~~~~~-~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~v 70 (70)
T 3fio_A 2 AIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeEC
Confidence 57899999999 9999999999999999986 899999999999876422 2468999998877653
No 71
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.56 E-value=2.6e-08 Score=94.22 Aligned_cols=103 Identities=12% Similarity=0.150 Sum_probs=53.7
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccccccchhhhhccCCc-E
Q 011545 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP-R 283 (483)
Q Consensus 205 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~r~v~-~ 283 (483)
+.+|+++|++ +++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++..... ..+.+.|.+-.+ +
T Consensus 71 ~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGiit~~Dil~~~~~~-~~~~~~~~~l~~~~ 145 (213)
T 1vr9_A 71 DSSVFNKVSL--PDFFVHEEDNIT-HALLLFLEHQEPYLPVVDEE-MRLKGAVSLHDFLEALIEA-LAMDVPGIRFSVLL 145 (213)
T ss_dssp TSBSGGGCBC--TTCCEETTSBHH-HHHHHHHHCCCSEEEEECTT-CBEEEEEEHHHHHHHHHHS-CC------------
T ss_pred CCcHHHHccC--CCEEECCCCcHH-HHHHHHHHhCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHH-hcCCCCcEEEEEEe
Confidence 4569999996 678899999999 99999999999999999875 8999999999999764332 123343332111 1
Q ss_pred ecCCCCHHHHHHHhHhcCCcEEEEEecCC
Q 011545 284 VSEDMPLYDILNEFQKGHSHIAVVYKDLN 312 (483)
Q Consensus 284 V~~~~~l~daL~~m~~~~~~~apVVDe~G 312 (483)
.....++.++++.|.+++.+.++|++.+|
T Consensus 146 ~~~~~~l~~~~~~l~~~~~~~l~V~~~~~ 174 (213)
T 1vr9_A 146 EDKPGELRKVVDALALSNINILSVITTRS 174 (213)
T ss_dssp -----------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEEEEec
Confidence 23445699999999999999999987643
No 72
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.37 E-value=2.1e-07 Score=84.19 Aligned_cols=41 Identities=22% Similarity=0.299 Sum_probs=39.3
Q ss_pred ccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 270 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 270 ~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+.+|+++|.+++++|++++++.+|++.|.+++.+.+||+|+
T Consensus 17 ~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~ 57 (170)
T 4esy_A 17 QVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ 57 (170)
T ss_dssp TSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECT
T ss_pred CCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcC
Confidence 46899999999999999999999999999999999999998
No 73
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.16 E-value=3e-06 Score=81.13 Aligned_cols=41 Identities=10% Similarity=0.141 Sum_probs=38.8
Q ss_pred ccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 270 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 270 ~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
..+|+++|.+++.++++++++.+|++.|.+++.+.+||+|+
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~ 46 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADG 46 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECT
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 35799999999999999999999999999999999999998
No 74
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.15 E-value=2.7e-06 Score=71.76 Aligned_cols=39 Identities=3% Similarity=0.102 Sum_probs=37.2
Q ss_pred chhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 272 PLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 272 ~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 2 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 40 (122)
T 3kpb_A 2 LVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDE 40 (122)
T ss_dssp BHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECT
T ss_pred chHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECC
Confidence 688999999999999999999999999999999999997
No 75
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.15 E-value=3.3e-06 Score=66.41 Aligned_cols=30 Identities=13% Similarity=0.092 Sum_probs=28.5
Q ss_pred CcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 281 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 281 v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+++|.+++++.+|++.|.+++++.+||+|+
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~ 31 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG 31 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 578999999999999999999999999987
No 76
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.11 E-value=5.8e-06 Score=72.57 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=38.4
Q ss_pred ccchhhhhcc--CCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 270 AVPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 270 ~~~V~dIM~r--~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
..+++++|.+ ++.++++++++.++++.|.+++.+.+||+|+
T Consensus 22 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~ 64 (148)
T 3lv9_A 22 EKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRK 64 (148)
T ss_dssp TCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESS
T ss_pred CCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC
Confidence 4689999987 8999999999999999999999999999987
No 77
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.09 E-value=1.6e-06 Score=76.89 Aligned_cols=61 Identities=16% Similarity=0.268 Sum_probs=54.3
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc
Q 011545 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 268 (483)
Q Consensus 203 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~ 268 (483)
..+.+|+++|++ ++.++++++++. ++++.|.+++++++||+| + |+++|+|+.+|+++....
T Consensus 75 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 75 SKATRVEEIMTA--KVRYVEPSQSTD-ECMALMTEHRMRHLPVLD-G-GKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp SSSCBHHHHSBS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHT
T ss_pred ccccCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHH
Confidence 357899999986 678899999999 999999999999999998 4 899999999999987543
No 78
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.08 E-value=2.1e-06 Score=76.60 Aligned_cols=63 Identities=17% Similarity=0.221 Sum_probs=56.1
Q ss_pred cCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCC---cEEEEEEchhhhccc
Q 011545 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPT---NIIGLILVKNLLSVD 266 (483)
Q Consensus 202 ~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d---~iVGIVs~kDLl~~~ 266 (483)
...+.+|+++|+++.+++++++++++. ++++.|.+++++++||++++ + +++|+|+.+|+++..
T Consensus 77 ~~~~~~v~~~m~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~~~vGiit~~dil~~l 142 (159)
T 3fv6_A 77 ELTSVPVHIIMTRMPNITVCRREDYVM-DIAKHLIEKQIDALPVIKDT-DKGFEVIGRVTKTNMTKIL 142 (159)
T ss_dssp CTTTCBGGGTSEETTSCCCBCTTSBHH-HHHHHHHHHTCSEEEEEEEC-SSSEEEEEEEEHHHHHHHH
T ss_pred cccCcCHHHHHcCCCCcEEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CcceeEEEEEEHHHHHHHH
Confidence 356789999999766788999999999 99999999999999999875 6 899999999998764
No 79
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.05 E-value=8.7e-06 Score=71.63 Aligned_cols=40 Identities=20% Similarity=0.351 Sum_probs=37.8
Q ss_pred cchhhhhcc--CCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 271 VPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 271 ~~V~dIM~r--~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.+++++|.+ +++++++++++.++++.|.+++.+.+||+|+
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~ 69 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDD 69 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECT
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECC
Confidence 479999988 8999999999999999999999999999997
No 80
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.03 E-value=8.1e-06 Score=70.42 Aligned_cols=40 Identities=13% Similarity=0.185 Sum_probs=37.9
Q ss_pred cchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 271 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 271 ~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.+++++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 7 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 46 (138)
T 2yzi_A 7 APIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIND 46 (138)
T ss_dssp SBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred hhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 5789999999999999999999999999999999999996
No 81
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.03 E-value=9.7e-06 Score=62.02 Aligned_cols=31 Identities=13% Similarity=0.118 Sum_probs=28.8
Q ss_pred CCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 280 RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 280 ~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
++.++++++++.++++.|.+++.+.+||+|+
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~ 31 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG 31 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 3578999999999999999999999999987
No 82
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.01 E-value=8.6e-06 Score=72.75 Aligned_cols=40 Identities=10% Similarity=0.090 Sum_probs=37.8
Q ss_pred cchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 271 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 271 ~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.+|+++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 5 ~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~ 44 (160)
T 2o16_A 5 IKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDA 44 (160)
T ss_dssp CBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred CcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 5789999889999999999999999999999999999997
No 83
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.01 E-value=8.1e-06 Score=72.18 Aligned_cols=40 Identities=5% Similarity=-0.066 Sum_probs=37.3
Q ss_pred cchhhhhc--cCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 271 VPLRKMII--RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 271 ~~V~dIM~--r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.+++++|. +++.++++++++.++++.|.+++.+.+||+|+
T Consensus 15 ~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~ 56 (156)
T 3ctu_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD 56 (156)
T ss_dssp TTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC
T ss_pred HHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECC
Confidence 47899998 78999999999999999999999999999997
No 84
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.00 E-value=8e-06 Score=69.86 Aligned_cols=41 Identities=12% Similarity=0.058 Sum_probs=38.9
Q ss_pred ccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 270 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 270 ~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+.+++++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 4 s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 44 (128)
T 3gby_A 4 SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG 44 (128)
T ss_dssp TCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred ceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC
Confidence 46899999999999999999999999999999999999997
No 85
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.00 E-value=1.1e-05 Score=70.09 Aligned_cols=40 Identities=15% Similarity=0.259 Sum_probs=37.8
Q ss_pred cchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 271 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 271 ~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 5 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 44 (141)
T 2rih_A 5 IRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTAR 44 (141)
T ss_dssp CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred eEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 4789999999999999999999999999999999999998
No 86
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.00 E-value=5.1e-06 Score=72.18 Aligned_cols=60 Identities=15% Similarity=0.133 Sum_probs=52.7
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccc
Q 011545 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (483)
Q Consensus 203 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~ 267 (483)
..+.+++++|++ +.++++++++. ++++.|.+++..++||+|++ |+++|+|+.+|+++...
T Consensus 67 ~~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 67 GDSDDVKKLLRP---ATFVPESKRLN-VLLREFRANHNHMAIVIDEY-GGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp GGGCCGGGTCBC---CCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHTTC-
T ss_pred CCCcCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHHh
Confidence 356789999974 67899999999 99999999999999999875 89999999999997653
No 87
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.00 E-value=9.7e-06 Score=73.49 Aligned_cols=59 Identities=14% Similarity=0.120 Sum_probs=52.5
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccc
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~ 267 (483)
.+.+|+++| + +++++++++++. ++++.|.+++..++||+|++ |+++|+|+.+|++....
T Consensus 105 ~~~~v~~im-~--~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dil~~l~ 163 (172)
T 3lhh_A 105 ERLELVDLV-K--NCNFVPNSLSGM-ELLEHFRTTGSQMVFVVDEY-GDLKGLVTLQDMMDALT 163 (172)
T ss_dssp CCCCGGGGC-B--CCEEEETTCCHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHH
T ss_pred CcccHHHHh-c--CCeEeCCCCCHH-HHHHHHHHcCCeEEEEEeCC-CCEEEEeeHHHHHHHHh
Confidence 367899999 3 678899999999 99999999999999999875 89999999999997643
No 88
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=97.99 E-value=9.9e-06 Score=79.08 Aligned_cols=41 Identities=7% Similarity=0.235 Sum_probs=38.9
Q ss_pred ccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 270 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 270 ~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
..+|+++|.+++.+|.+++++.++.+.|.+++++.+||||+
T Consensus 12 ~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~ 52 (250)
T 2d4z_A 12 NIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDT 52 (250)
T ss_dssp SCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESC
T ss_pred CCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEec
Confidence 45799999999999999999999999999999999999987
No 89
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=97.98 E-value=7.6e-06 Score=72.46 Aligned_cols=58 Identities=12% Similarity=0.130 Sum_probs=52.3
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccc
Q 011545 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (483)
Q Consensus 205 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~ 267 (483)
+.+|+++| + ++.++++++++. ++++.|.+++..++||++++ |+++|+|+.+|++....
T Consensus 85 ~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd~~-g~~vGivt~~dil~~l~ 142 (153)
T 3oco_A 85 KAKISTIM-R--DIVSVPENMKVP-DVMEEMSAHRVPMAIVIDEY-GGTSGIITDKDVYEELF 142 (153)
T ss_dssp TSBGGGTC-B--CCEEEETTSBHH-HHHHHHHHTTCSCEEEECTT-SCEEEEECHHHHHHHHH
T ss_pred CCcHHHHh-C--CCeEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CCEEEEeeHHHHHHHHh
Confidence 67899999 3 678899999999 99999999999999999875 89999999999997643
No 90
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=97.97 E-value=1.4e-05 Score=67.42 Aligned_cols=39 Identities=15% Similarity=0.340 Sum_probs=36.6
Q ss_pred chhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 272 PLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 272 ~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 2 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 40 (125)
T 1pbj_A 2 RVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVKE 40 (125)
T ss_dssp CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEET
T ss_pred CHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEeC
Confidence 578999899999999999999999999999999999985
No 91
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=97.97 E-value=5.2e-06 Score=71.50 Aligned_cols=60 Identities=25% Similarity=0.419 Sum_probs=53.7
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccc
Q 011545 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (483)
Q Consensus 203 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~ 267 (483)
..+.+|+++|++ ++.++++++++. ++++.|.+++++++||++ + |+++|+|+.+|+++...
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 71 VKDTQVKEIMTR--QVAYVDLNNTNE-DCMALITEMRVRHLPVLD-D-GKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp GGGSBGGGTSBC--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHH
T ss_pred cccCCHHHhccC--CCeEECCCCcHH-HHHHHHHHhCCCEEEEEe-C-CEEEEEEEHHHHHHHHH
Confidence 467899999985 678899999999 999999999999999998 4 89999999999987643
No 92
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=97.97 E-value=3.3e-06 Score=73.64 Aligned_cols=61 Identities=21% Similarity=0.394 Sum_probs=53.2
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccc
Q 011545 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (483)
Q Consensus 203 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~ 267 (483)
..+.+|+++|++ +++++++++++. ++++.|.+++++++||++++ |+++|+|+.+|+++...
T Consensus 82 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 82 TNGKLVGDLMTP--APLVVEEKTNLE-DAAKILLETKYRRLPVVDSD-GKLVGIITRGNVVRAAL 142 (152)
T ss_dssp --CCBHHHHSEE--SCCCEESSSBHH-HHHHHHHHSSCCEEEEECTT-SBEEEEEEHHHHHHHHH
T ss_pred hccccHHHhcCC--CceEECCCCcHH-HHHHHHHHCCCCEEEEECCC-CcEEEEEEHHHHHHHHH
Confidence 456789999996 567899999999 99999999999999999865 89999999999997643
No 93
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=97.96 E-value=1e-05 Score=73.99 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=55.0
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc
Q 011545 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 268 (483)
Q Consensus 203 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~ 268 (483)
..+.+++++|.+ +++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++....
T Consensus 72 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 72 PDEVPIRLVMRK--PIPKVKSDYDVK-DVAAYLSENGLERCAVVDDP-GRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp GGGSBGGGTSBS--SCCEEETTCBHH-HHHHHHHHHTCSEEEEECTT-CCEEEEEEHHHHTTTSCH
T ss_pred cccCCHHHHhCC--CCcEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHHHh
Confidence 467789999985 678899999999 99999999999999999875 899999999999976543
No 94
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=97.95 E-value=1.2e-05 Score=72.14 Aligned_cols=39 Identities=5% Similarity=-0.039 Sum_probs=35.7
Q ss_pred chhhhhc--cCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 272 PLRKMII--RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 272 ~V~dIM~--r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.++++|+ .++.+|++++++.+|++.|.+++.+.+||+|+
T Consensus 16 ~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~ 56 (156)
T 3k6e_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD 56 (156)
T ss_dssp TGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC
T ss_pred cHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC
Confidence 5788886 47899999999999999999999999999987
No 95
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=97.95 E-value=9.4e-06 Score=71.15 Aligned_cols=41 Identities=15% Similarity=0.149 Sum_probs=37.6
Q ss_pred ccchhhhhc--cCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 270 AVPLRKMII--RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 270 ~~~V~dIM~--r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
..+++++|. +++.++++++++.++++.|.+++.+.+||+|+
T Consensus 14 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~ 56 (150)
T 3lqn_A 14 QIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP 56 (150)
T ss_dssp HCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred cCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECC
Confidence 358999998 56899999999999999999999999999997
No 96
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=97.95 E-value=1.3e-05 Score=68.87 Aligned_cols=40 Identities=8% Similarity=0.163 Sum_probs=37.8
Q ss_pred cchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 271 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 271 ~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 47 (138)
T 2p9m_A 8 IKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDD 47 (138)
T ss_dssp CBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECT
T ss_pred CCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECC
Confidence 5789999889999999999999999999999999999997
No 97
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=97.94 E-value=2.1e-05 Score=67.35 Aligned_cols=40 Identities=15% Similarity=0.214 Sum_probs=37.6
Q ss_pred cchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 271 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 271 ~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 4 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 43 (133)
T 2ef7_A 4 EIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVDG 43 (133)
T ss_dssp CBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred ccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEEC
Confidence 5789999888999999999999999999999999999986
No 98
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=97.93 E-value=7e-06 Score=70.55 Aligned_cols=58 Identities=16% Similarity=0.147 Sum_probs=51.1
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccc
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~ 266 (483)
.+.+++++|++ ++++++++++. ++++.|.+++..++||+|++ |+++|+|+.+|+++..
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~pVvd~~-g~~~Giit~~Dil~~l 124 (129)
T 3jtf_A 67 PALDIRSLVRP---AVFIPEVKRLN-VLLREFRASRNHLAIVIDEH-GGISGLVTMEDVLEQI 124 (129)
T ss_dssp TTSCGGGGCBC---CCEEETTCBHH-HHHHHHHTSSCCEEEEECC--CCEEEEEEHHHHHHHH
T ss_pred CCcCHHHHhCC---CeEeCCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 46789999964 67899999999 99999999999999999875 8999999999998764
No 99
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=97.92 E-value=9.5e-06 Score=69.71 Aligned_cols=58 Identities=14% Similarity=0.178 Sum_probs=51.5
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccc
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~ 266 (483)
.+.+++++|+ ++.++++++++. ++++.|.+++..++||+|++ |+++|+|+.+|+++..
T Consensus 70 ~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~~vGivt~~dil~~l 127 (130)
T 3i8n_A 70 GQKQLGAVMR---PIQVVLNNTALP-KVFDQMMTHRLQLALVVDEY-GTVLGLVTLEDIFEHL 127 (130)
T ss_dssp TTSBHHHHSE---ECCEEETTSCHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred CcCCHHHHhc---CCcCcCCCCcHH-HHHHHHHHcCCeEEEEEcCC-CCEEEEEEHHHHHHHH
Confidence 4678999996 367899999999 99999999999999999875 8999999999998753
No 100
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=97.92 E-value=6.2e-06 Score=70.59 Aligned_cols=58 Identities=10% Similarity=0.132 Sum_probs=51.4
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccc
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~ 266 (483)
.+.+++++|++ +.++++++++. ++++.|.+++..++||+|++ |+++|+|+.+|+++..
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 67 EAFSMDKVLRT---AVVVPESKRVD-RMLKEFRSQRYHMAIVIDEF-GGVSGLVTIEDILELI 124 (127)
T ss_dssp CCCCHHHHCBC---CCEEETTCBHH-HHHHHHHHTTCCEEEEECTT-SCEEEEEEHHHHHHHC
T ss_pred CCCCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 46789999964 46899999999 99999999999999999875 8999999999998754
No 101
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.92 E-value=1e-05 Score=71.34 Aligned_cols=61 Identities=16% Similarity=0.244 Sum_probs=53.0
Q ss_pred cccccccccccC----ccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccc
Q 011545 204 TEKTAKDAMTPI----SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (483)
Q Consensus 204 ~~~tV~dIMtPr----~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~ 266 (483)
.+.+++++|.++ .++.++++++++. ++++.|.+++++++||+|++ |+++|+|+.+|+++..
T Consensus 85 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 85 LDVSVTKALQHRSHYFEGVLKCYLHETLE-TIINRLVEAEVHRLVVVDEN-DVVKGIVSLSDILQAL 149 (152)
T ss_dssp TTSBGGGGGGTCCHHHHTCSEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred hcchHHHHHhhhhcccCCCeEECCCCcHH-HHHHHHHHcCCeEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 356799999743 4678899999999 99999999999999999875 8999999999998754
No 102
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=97.91 E-value=5.8e-06 Score=74.39 Aligned_cols=61 Identities=21% Similarity=0.380 Sum_probs=54.4
Q ss_pred cCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccc
Q 011545 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (483)
Q Consensus 202 ~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~ 266 (483)
...+.+|+++|++ +++++++++++. ++++.|.++++.++||++++ |+++|+|+.+|+++..
T Consensus 94 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~~ 154 (180)
T 3sl7_A 94 KTYGKVVGDLMTP--SPLVVRDSTNLE-DAARLLLETKFRRLPVVDAD-GKLIGILTRGNVVRAA 154 (180)
T ss_dssp TTTTCBHHHHSEE--SCCCEETTSBHH-HHHHHHTTSTTCEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred ccccccHHHHhCC--CceEeCCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 4567889999985 567899999999 99999999999999999865 8999999999998764
No 103
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.90 E-value=1.6e-05 Score=70.57 Aligned_cols=40 Identities=15% Similarity=0.141 Sum_probs=37.6
Q ss_pred cchhhhhcc--CCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 271 VPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 271 ~~V~dIM~r--~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.+++++|.+ +++++++++++.++++.|.+++.+.+||+|+
T Consensus 14 ~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~ 55 (159)
T 1yav_A 14 ATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDP 55 (159)
T ss_dssp CBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECT
T ss_pred hhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECC
Confidence 578999987 8999999999999999999999999999997
No 104
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=97.89 E-value=9.3e-06 Score=70.07 Aligned_cols=58 Identities=17% Similarity=0.149 Sum_probs=50.9
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccc
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~ 266 (483)
...+++++|. ++.++++++++. ++++.|.+++..++||+|++ |+++|+|+.+|+++..
T Consensus 68 ~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~l 125 (130)
T 3hf7_A 68 TKEIMLRAAD---EIYFVPEGTPLS-TQLVKFQRNKKKVGLVVDEY-GDIQGLVTVEDILEEI 125 (130)
T ss_dssp CHHHHHHHSB---CCCEEETTCBHH-HHHHHHHHHCCCEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred chhhHHHhcc---CCeEeCCCCcHH-HHHHHHHhcCCeEEEEEcCC-CCEEEEeeHHHHHHHH
Confidence 3467899994 467899999999 99999999999999999875 8999999999998764
No 105
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=97.88 E-value=1.9e-05 Score=70.78 Aligned_cols=41 Identities=15% Similarity=0.196 Sum_probs=37.6
Q ss_pred ccchhhhhcc---CCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 270 AVPLRKMIIR---RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 270 ~~~V~dIM~r---~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
..+|+++|.+ ++.++++++++.++++.|.+++.+.+||+|+
T Consensus 23 ~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~ 66 (165)
T 3fhm_A 23 ATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDA 66 (165)
T ss_dssp SCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred hcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC
Confidence 3589999874 6999999999999999999999999999997
No 106
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.87 E-value=1.7e-05 Score=69.85 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=37.7
Q ss_pred ccchhhhhcc--CCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 270 AVPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 270 ~~~V~dIM~r--~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
..+++++|.+ +++++++++++.++++.|.+++.+.+||+|+
T Consensus 10 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~ 52 (157)
T 2emq_A 10 QMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDT 52 (157)
T ss_dssp CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECT
T ss_pred hCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcC
Confidence 3578999876 8899999999999999999999999999997
No 107
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=97.85 E-value=1.5e-05 Score=68.31 Aligned_cols=40 Identities=13% Similarity=0.101 Sum_probs=37.5
Q ss_pred cchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 271 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 271 ~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 47 (133)
T 1y5h_A 8 TTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGD 47 (133)
T ss_dssp CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECG
T ss_pred cCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECC
Confidence 4789999889999999999999999999999999999987
No 108
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.84 E-value=7.3e-06 Score=87.68 Aligned_cols=100 Identities=15% Similarity=0.225 Sum_probs=20.6
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccccccchhhhhccCC--
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRI-- 281 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~r~v-- 281 (483)
.+.+|+++|++..+++++++++++. ++++.|.++++.++||+|++ ++++|+|+.+|+++...... ...+.+.+-.
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~~~~-~~~d~~~~l~v~ 235 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLS-EANKIIWEKKLNALPIIDDD-QHLRYIVFRKDYDRSQVCHN-ELVDSQKRYLVG 235 (503)
T ss_dssp -----------------------------------------------------------------CC-CCBCTTSCBCCE
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEecHHHHhhhccc-chhccccccccc
Confidence 4568999999765689999999999 99999999999999999976 89999999999998754321 1222221111
Q ss_pred cEecCCCCHHHHHHHhHhcCCcEEEE
Q 011545 282 PRVSEDMPLYDILNEFQKGHSHIAVV 307 (483)
Q Consensus 282 ~~V~~~~~l~daL~~m~~~~~~~apV 307 (483)
..++. ....+.++.|.+.+.+.+.|
T Consensus 236 a~v~~-~~~~e~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 236 AGINT-RDFRERVPALVEAGADVLCI 260 (503)
T ss_dssp EEECS-SSHHHHHHHHHHHTCSEEEE
T ss_pred cccCc-hhHHHHHHHHHhhhccceEE
Confidence 23455 66777789999999987655
No 109
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=97.83 E-value=3.2e-05 Score=66.72 Aligned_cols=40 Identities=10% Similarity=0.350 Sum_probs=36.3
Q ss_pred cchhh---hhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 271 VPLRK---MIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 271 ~~V~d---IM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.++++ +|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 8 ~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 50 (144)
T 2nyc_A 8 IPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE 50 (144)
T ss_dssp SBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred cchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcC
Confidence 35677 77788999999999999999999999999999997
No 110
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=97.82 E-value=1.2e-05 Score=71.50 Aligned_cols=55 Identities=16% Similarity=0.197 Sum_probs=49.8
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhh
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL 263 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl 263 (483)
.+.+++++|+| ++++++++++. ++++.|.+++..++||+|++ |+++|+|+.+|++
T Consensus 101 ~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-g~~~Givt~~Dil 155 (156)
T 3oi8_A 101 EQFHLKSILRP---AVFVPEGKSLT-ALLKEFREQRNHMAIVIDEY-GGTSGLVTFEDII 155 (156)
T ss_dssp GGCCHHHHCBC---CCEEETTSBHH-HHHHHHHHTTCCEEEEECTT-SSEEEEEEHHHHC
T ss_pred CcccHHHHcCC---CEEECCCCCHH-HHHHHHHhcCCeEEEEECCC-CCEEEEEEHHHhc
Confidence 46789999974 67899999999 99999999999999999876 8999999999986
No 111
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.81 E-value=3.3e-05 Score=68.30 Aligned_cols=41 Identities=12% Similarity=0.226 Sum_probs=38.3
Q ss_pred ccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 270 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 270 ~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
..+++++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 12 ~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~ 52 (164)
T 2pfi_A 12 HVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVES 52 (164)
T ss_dssp SCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESC
T ss_pred CCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEec
Confidence 46899999999999999999999999999999999999985
No 112
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.80 E-value=3.1e-05 Score=68.62 Aligned_cols=41 Identities=22% Similarity=0.287 Sum_probs=38.4
Q ss_pred ccchhhhhccCCcEecCCCCHHHHHHHhHhcCCcE-EEEEec
Q 011545 270 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHI-AVVYKD 310 (483)
Q Consensus 270 ~~~V~dIM~r~v~~V~~~~~l~daL~~m~~~~~~~-apVVDe 310 (483)
..+++++|.++++++++++++.+|++.|.+++.+. +||+|+
T Consensus 15 ~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~ 56 (157)
T 1o50_A 15 VKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARD 56 (157)
T ss_dssp HHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEET
T ss_pred cccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEEC
Confidence 35789999999999999999999999999999999 999998
No 113
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.79 E-value=1.3e-05 Score=75.47 Aligned_cols=62 Identities=16% Similarity=0.218 Sum_probs=54.9
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc
Q 011545 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 268 (483)
Q Consensus 203 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~ 268 (483)
..+.+|+++|++ +++++++++++. ++++.|.++++..+||+|++ |+++|+|+..|++....+
T Consensus 113 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVD~~-g~lvGiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 113 EPHEPLISLLSE--DSRALTANTTLL-DAAEAIEHSREIELPVIDDA-GELIGRVTLRAATALVRE 174 (205)
T ss_dssp CTTSBGGGGCCS--SCCCEETTSCHH-HHHHHHHTSSCSEEEEECTT-SBEEEEEEHHHHHHHHHH
T ss_pred CCcchHHHHhcC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHH
Confidence 356789999984 678899999998 99999999999999999875 899999999999977543
No 114
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.78 E-value=8.4e-05 Score=79.70 Aligned_cols=39 Identities=8% Similarity=0.123 Sum_probs=37.5
Q ss_pred cchhhhhccCCcEecCC-CCHHHHHHHhHhcCCcEEEEEe
Q 011545 271 VPLRKMIIRRIPRVSED-MPLYDILNEFQKGHSHIAVVYK 309 (483)
Q Consensus 271 ~~V~dIM~r~v~~V~~~-~~l~daL~~m~~~~~~~apVVD 309 (483)
.+|+++|.+++++|+++ +++.++++.|.+++.+.+||+|
T Consensus 384 ~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd 423 (527)
T 3pc3_A 384 LAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVD 423 (527)
T ss_dssp SBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEEC
T ss_pred CcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEE
Confidence 67999999999999999 9999999999999999999999
No 115
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.78 E-value=4.1e-05 Score=69.90 Aligned_cols=41 Identities=12% Similarity=0.152 Sum_probs=37.4
Q ss_pred ccchhhhhc--cCCcEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 270 AVPLRKMII--RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 270 ~~~V~dIM~--r~v~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
..+|+++|+ ++++++++++++.++++.|.+++.+.+||+|+
T Consensus 35 ~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~ 77 (173)
T 3ocm_A 35 ERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRG 77 (173)
T ss_dssp TSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESS
T ss_pred CCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeC
Confidence 468999986 46889999999999999999999999999987
No 116
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.72 E-value=5e-05 Score=81.43 Aligned_cols=104 Identities=15% Similarity=0.144 Sum_probs=80.7
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccccccchhhhhccCCc
Q 011545 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP 282 (483)
Q Consensus 203 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~r~v~ 282 (483)
-.+.+|+++|++ .++++++++.++. ++++.|.+++...+||+|++ ++++|+|+.+|+++..... ..+++.+.+..+
T Consensus 172 ~~~~~V~~vM~~-~~~vtv~~~~~l~-eal~~m~~~~i~~lpVVDe~-g~l~GiIT~~Dil~~~~~p-~a~~D~~~rl~V 247 (511)
T 3usb_A 172 DYSIKISDVMTK-EQLITAPVGTTLS-EAEKILQKYKIEKLPLVDNN-GVLQGLITIKDIEKVIEFP-NSAKDKQGRLLV 247 (511)
T ss_dssp CSSSBHHHHCCC-CCCCCEETTCCHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHHHCT-TCCBCTTSCBCC
T ss_pred cCCCcHHHhccc-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEeCC-CCEeeeccHHHHHHhhhcc-cchhhhccceee
Confidence 456789999996 5778999999999 99999999999999999976 8999999999999875432 234444444333
Q ss_pred --EecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 283 --RVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 283 --~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
.+.......+.++.+.+.+.+.+.|-..
T Consensus 248 ~aavg~~~d~~era~aLveaGvd~I~Id~a 277 (511)
T 3usb_A 248 GAAVGVTADAMTRIDALVKASVDAIVLDTA 277 (511)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEEEEECS
T ss_pred eeeeeeccchHHHHHHHHhhccceEEeccc
Confidence 3444555677788888899998877544
No 117
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.72 E-value=4.3e-05 Score=69.01 Aligned_cols=40 Identities=13% Similarity=0.044 Sum_probs=36.0
Q ss_pred ccchhhhhccC----CcEe--cCCCCHHHHHHHhHhcCCcEEEEEe
Q 011545 270 AVPLRKMIIRR----IPRV--SEDMPLYDILNEFQKGHSHIAVVYK 309 (483)
Q Consensus 270 ~~~V~dIM~r~----v~~V--~~~~~l~daL~~m~~~~~~~apVVD 309 (483)
..+++++|.+. +++| ++++++.+|++.|.+++.+.+||+|
T Consensus 10 ~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~ 55 (185)
T 2j9l_A 10 KTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVV 55 (185)
T ss_dssp CCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEES
T ss_pred cCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEE
Confidence 45899998876 7888 9999999999999999999999993
No 118
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.55 E-value=4e-05 Score=75.14 Aligned_cols=62 Identities=16% Similarity=0.295 Sum_probs=54.1
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc
Q 011545 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 268 (483)
Q Consensus 203 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~ 268 (483)
..+.+|+++|++ +++++++++++. ++++.|.++++..+||+|++ |+++|+|+..|++....+
T Consensus 196 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 196 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp CTTCBSTTTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHC--
T ss_pred CCCCcHHHHhCC--CCeEEeCCCCHH-HHHHHHHhcCCCEEEEEeCC-CeEEEEEEHHHHHHHHHH
Confidence 367889999974 678899999999 99999999999999999876 899999999999976543
No 119
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.45 E-value=5.5e-05 Score=74.73 Aligned_cols=61 Identities=16% Similarity=0.294 Sum_probs=54.4
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccc
Q 011545 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (483)
Q Consensus 203 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~ 267 (483)
..+.+|+++|++ +++++++++++. ++++.|.++++.++||+|++ |+++|+|+..|++....
T Consensus 198 ~~~~~v~~im~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 198 DDDTLIADILNE--RVISVHVGDDQE-DVAQTIRDYDFLAVPVTDYD-DHLLGIVTVDDIIDVID 258 (286)
T ss_dssp CTTSBHHHHSBS--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHH
T ss_pred CCCCcHHHHcCC--CCeeecCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHHH
Confidence 357789999985 678899999999 99999999999999999875 89999999999997643
No 120
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=97.33 E-value=0.00011 Score=80.55 Aligned_cols=57 Identities=5% Similarity=-0.022 Sum_probs=49.5
Q ss_pred ccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccc
Q 011545 207 TAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 268 (483)
Q Consensus 207 tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~ 268 (483)
+++++|++ +++++++++++. ++++.|.+++++++||++ + |+++|+||.+|+++...+
T Consensus 569 ~v~~iMt~--~pitV~~~~~l~-ea~~~M~~~~i~~lpVve-~-G~lvGIVT~~Dll~~~~~ 625 (632)
T 3org_A 569 SLVVPCDV--SPIVVTSYSLVR-QLHFLFVMLMPSMIYVTE-R-GKLVGIVEREDVAYGYSN 625 (632)
T ss_dssp --CCSCCC--CCCEEETTCBHH-HHHHHHHHTCCSEEEEEE-T-TEEEEEEEGGGTEECCCC
T ss_pred ccchhhcC--CCceecCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEehhhHHHHHhh
Confidence 48999995 678999999999 999999999999999994 4 899999999999987543
No 121
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.30 E-value=0.00014 Score=77.46 Aligned_cols=99 Identities=12% Similarity=0.081 Sum_probs=14.2
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccccccchhhhhccC--C
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRR--I 281 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~r~--v 281 (483)
.+.+|+++|+|+.++++++++.++. ++++.|.+++...+||+|++ ++++|+|+.+|+++...... ..++.--+- .
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~~p~-a~kd~~grl~v~ 221 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLE-EMKAKLYENRIEKMLVVDEN-FYLRGLVTFRDIEKAKTYPL-ASKDEQGRLRVG 221 (490)
T ss_dssp ----------------------------------------------------------------CTT-CCBCTTSCBCCE
T ss_pred cCCcHHHHhccCCCCEEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEehHHhhhhccCcc-hhhhccCcceee
Confidence 4678999999765789999999999 99999999999999999976 89999999999998642211 111110000 1
Q ss_pred cEecCCCCHHHHHHHhHhcCCcEE
Q 011545 282 PRVSEDMPLYDILNEFQKGHSHIA 305 (483)
Q Consensus 282 ~~V~~~~~l~daL~~m~~~~~~~a 305 (483)
..+.....-.+.++.+.+.+...+
T Consensus 222 aavG~~~~~~~~a~~l~~aG~d~I 245 (490)
T 4avf_A 222 AAVGTGADTGERVAALVAAGVDVV 245 (490)
T ss_dssp EEECSSTTHHHHHHHHHHTTCSEE
T ss_pred eeeccccchHHHHHHHhhcccceE
Confidence 123344444555666666666644
No 122
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.22 E-value=0.00018 Score=76.34 Aligned_cols=61 Identities=16% Similarity=0.303 Sum_probs=54.8
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhcccc
Q 011545 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (483)
Q Consensus 203 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~ 267 (483)
-.+.+++++|++ +++++++++++. ++++.|.+++...+||+|++ |+++|+|+.+|++....
T Consensus 216 ~~~~~v~dim~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVDe~-g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 216 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp CTTSBGGGTSBS--SCCCEESSSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHHH
T ss_pred CCCCcHHHHhCC--CCeEEeCCCcHH-HHHHHHHhcCCcEEEEEcCC-CEEEEEEehHhhHHHHH
Confidence 467899999984 678899999999 99999999999999999876 89999999999997653
No 123
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.19 E-value=0.00019 Score=76.38 Aligned_cols=101 Identities=22% Similarity=0.281 Sum_probs=22.3
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccccccchhhhhccCCc-
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP- 282 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~r~v~- 282 (483)
.+.+|+++|+++.+++++++++++. ++++.|.++++.++||+|++ ++++|+|+.+|+++..... ...++...+-..
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~~~~-~~~~D~~~~l~vg 229 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLE-KAKEILHQHRIEKLPLVSKD-NKLVGLITIKDIMSVIEHP-NAARDEKGRLLVG 229 (494)
T ss_dssp ----------------------------------------------------------CHHHHTCT-TCCBCTTSCBCCE
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHhhhccc-cccccchhhhccc
Confidence 4568999999756789999999999 99999999999999999876 8999999999999764322 112221001011
Q ss_pred -EecCCCCHHHHHHHhHhcCCcEEEE
Q 011545 283 -RVSEDMPLYDILNEFQKGHSHIAVV 307 (483)
Q Consensus 283 -~V~~~~~l~daL~~m~~~~~~~apV 307 (483)
-+.......+.+..+.+.+...+.+
T Consensus 230 a~ig~~~~~~~~a~~l~~aGvd~v~i 255 (494)
T 1vrd_A 230 AAVGTSPETMERVEKLVKAGVDVIVI 255 (494)
T ss_dssp EEECSSTTHHHHHHHHHHTTCSEEEE
T ss_pred cccCcCHhHHHHHHHHHHhCCCEEEE
Confidence 2344455667777788877777655
No 124
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.08 E-value=0.0002 Score=76.42 Aligned_cols=61 Identities=16% Similarity=0.240 Sum_probs=44.3
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccc
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~ 266 (483)
.+.+++++|+|+.++++++++.++. ++++.|.+++...+||+|++ ++++|+|+.+|+++..
T Consensus 147 ~~~~v~diM~p~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 147 LTKSVAAVMTPKERLATVKEGATGA-EVQEKMHKARVEKILVVNDE-FQLKGMITAKDFHKAE 207 (496)
T ss_dssp TTSBGGGTSEEGGGCCEEECC-----CGGGTCC---CCCEEEECTT-SBCCEEECCC-----C
T ss_pred CCCcHHHHhcCCCCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CCEEEeehHhHHHHhh
Confidence 5678999999766688999999998 99999999999999999976 8999999999999764
No 125
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.98 E-value=0.00037 Score=74.53 Aligned_cols=99 Identities=11% Similarity=0.121 Sum_probs=57.2
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccccccchhhhhccCCc-
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP- 282 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~r~v~- 282 (483)
.+.+++++|+++.+++++++++++. ++++.|.+++..++||+|++ ++++|+|+.+|+++...... ...+ +.....
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~~~~~-~~~~-~~~rl~v 246 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLK-EANEILQRSKKGKLPIVNDC-DELVAIIARTDLKKNRDYPL-ASKD-SQKQLLC 246 (514)
T ss_dssp ----------CCBCCCCEETTCCST-TTTTHHHHHTCSCCCEESSS-SCCC----CCCCSSCCCCTT-CCBC-TTSCBCC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCCcccEECCC-CeEEEEEEHHHHHHHhhCcc-hhcc-cCCceee
Confidence 4578999999655788999999999 99999999999999999876 89999999999997653221 1111 111111
Q ss_pred --EecCCCCHHHHHHHhHhcCCcEEE
Q 011545 283 --RVSEDMPLYDILNEFQKGHSHIAV 306 (483)
Q Consensus 283 --~V~~~~~l~daL~~m~~~~~~~ap 306 (483)
.+.......+.++.+.+.+...+.
T Consensus 247 ga~vG~~~~~~~~a~~~~~aG~d~v~ 272 (514)
T 1jcn_A 247 GAAVGTREDDKYRLDLLTQAGVDVIV 272 (514)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEEE
T ss_pred eeEecCchhhHHHHHHHHHcCCCEEE
Confidence 133333455555666666666443
No 126
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.87 E-value=0.00062 Score=72.31 Aligned_cols=99 Identities=18% Similarity=0.254 Sum_probs=18.6
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccccccchhhhhccCC--
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRI-- 281 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~r~v-- 281 (483)
.+.+++++|++ +++++++++++. ++++.|.+++...+||+|++ ++++|+|+.+|+++...... ...+.+.+-.
T Consensus 148 ~~~~v~~im~~--~~~~v~~~~~l~-eal~~m~~~~~~~lpVVde~-g~lvGiiT~~Dil~~~~~~~-~~~~~~g~~~v~ 222 (486)
T 2cu0_A 148 EGKLVKELMTK--EVITVPESIEVE-EALKIMIENRIDRLPVVDER-GKLVGLITMSDLVARKKYKN-AVRDENGELLVA 222 (486)
T ss_dssp ---------------------------------------------------------------CCTT-CCBCTTSCBCCE
T ss_pred CCCCHHHHccC--CCeEECCcCcHH-HHHHHHHHcCCCEEEEEecC-CeEEEEEEHHHHHHhhhccc-cccccCCceeec
Confidence 45689999985 678999999998 99999999999999999876 89999999999998754221 1111111111
Q ss_pred cEecCCCCHHHHHHHhHhcCCcEEEEEec
Q 011545 282 PRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (483)
Q Consensus 282 ~~V~~~~~l~daL~~m~~~~~~~apVVDe 310 (483)
..++. .+ .+.+..|.+.+.+.+ |+|.
T Consensus 223 ~~~~~-~~-~~~a~~l~~~gvd~l-vvdt 248 (486)
T 2cu0_A 223 AAVSP-FD-IKRAIELDKAGVDVI-VVDT 248 (486)
T ss_dssp EEECT-TC-HHHHHHHHHTTCSEE-EEEC
T ss_pred ceech-hh-HHHHHHHHHhcCCce-EEEe
Confidence 12333 33 566778888888875 5553
No 127
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.82 E-value=0.00045 Score=73.81 Aligned_cols=59 Identities=19% Similarity=0.298 Sum_probs=0.0
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccc
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~ 266 (483)
.+.+|+++||+ ++++++.+.+++ ++.++|.++++..+||+|++ ++++|+|+.+|+.+..
T Consensus 198 ~~~~V~evMT~--~lvt~~~~~~le-eA~~iL~~~kieklpVVd~~-g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 198 AETPIKSVMTT--EVVTGSSPITLE-KANSLLRETKKGKLPIVDSN-GHLVSLVARSDLLKNQ 256 (556)
T ss_dssp ---------------------------------------------------------------
T ss_pred cceEhhhhccc--ceEEecCCCCHH-HHHHHHHHccccceeEEccC-CcEEEEEEechhhhhh
Confidence 35689999996 799999999998 99999999999999999976 8999999999998753
No 128
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.75 E-value=0.0029 Score=67.02 Aligned_cols=100 Identities=12% Similarity=0.162 Sum_probs=69.9
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCcccccccCCCCcEEEEEEchhhhccccccccchhhhhccCC--
Q 011545 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRI-- 281 (483)
Q Consensus 204 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~d~iVGIVs~kDLl~~~~~~~~~V~dIM~r~v-- 281 (483)
.+.+++++|++ .+++++++++++. ++++.|.+++..++||+|++ ++++|+|+.+|+++...... ...+...+-.
T Consensus 150 ~~~~v~~im~~-~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVd~~-g~lvGivt~~Dil~~~~~~~-~~~d~~~~~~vg 225 (491)
T 1zfj_A 150 YNAPISEHMTS-EHLVTAAVGTDLE-TAERILHEHRIEKLPLVDNS-GRLSGLITIKDIEKVIEFPH-AAKDEFGRLLVA 225 (491)
T ss_dssp SSSBTTTSCCC-SCCCCEETTCCHH-HHHHHHHHTTCSEEEEECTT-SBEEEEEEHHHHHHHHHCTT-CCBCTTSCBCCE
T ss_pred CCCcHHHHcCC-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEEHHHHHHHHhccc-cccCcCCcEEEE
Confidence 56789999984 2567899999999 99999999999999999976 89999999999997654211 1111100101
Q ss_pred cEecCCCCHHHHHHHhHhcCCcEEEE
Q 011545 282 PRVSEDMPLYDILNEFQKGHSHIAVV 307 (483)
Q Consensus 282 ~~V~~~~~l~daL~~m~~~~~~~apV 307 (483)
..+.......+.++.+.+.+...+.+
T Consensus 226 ~~i~~~~~~~~~a~~l~~~G~d~ivi 251 (491)
T 1zfj_A 226 AAVGVTSDTFERAEALFEAGADAIVI 251 (491)
T ss_dssp EEECSSTTHHHHHHHHHHHTCSEEEE
T ss_pred EeccCchhHHHHHHHHHHcCCCeEEE
Confidence 12344344455566666777776543
No 129
>2jaf_A Halorhodopsin, HR; chromophore, chloride pump, ION transport, membrane, chloride, receptor, ION pump, transport, sensory transduction; HET: BOG PLM RET; 1.7A {Halobacterium salinarium} PDB: 2jag_A* 1e12_A*
Probab=38.43 E-value=1.9e+02 Score=27.97 Aligned_cols=39 Identities=15% Similarity=0.270 Sum_probs=21.5
Q ss_pred HHHHhhcchHHHHHhHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 011545 111 LMFGEILPQAVCTRYGLTVGATMAPIVRVLLCLFFPISYPI 151 (483)
Q Consensus 111 lvfGEiiPK~la~~~p~~ia~~~a~~l~~l~~l~~Plv~~l 151 (483)
.+|++. .|+...+ ..+-+....+.+-.+.|++||++|.+
T Consensus 178 ~l~~~~-~~~a~~~-~v~~~f~~l~~~v~v~W~iYPI~w~l 216 (274)
T 2jaf_A 178 ALVTDW-AASASSA-GTAEIFDTLRVLVVVLWLGYPIVWAV 216 (274)
T ss_dssp HHHTHH-HHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445554 5544444 33333344445556677788888755
No 130
>3qbg_A Halorhodopsin; membrane protein, ION pump, retinal, membrane; HET: RET BNG 22B; 1.80A {Natronomonas pharaonis} PDB: 3a7k_A* 3abw_A* 3qbi_A* 3qbk_A* 3qbl_A*
Probab=21.98 E-value=4.1e+02 Score=25.78 Aligned_cols=21 Identities=19% Similarity=0.518 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHhhhhHHHHH
Q 011545 132 TMAPIVRVLLCLFFPISYPIS 152 (483)
Q Consensus 132 ~~a~~l~~l~~l~~Plv~~l~ 152 (483)
...+.+-.+.|.+||++|.++
T Consensus 212 ~~L~~~v~v~W~iYPI~w~l~ 232 (291)
T 3qbg_A 212 STLKLLTVVMWLGYPIVWALG 232 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS
T ss_pred HHhHHHHHHHHHHHHHHHhhc
Confidence 333445556677888888663
No 131
>1xio_A Anabaena sensory rhodopsin; signaling protein, photoreceptor; HET: RET PEE; 2.00A {Nostoc SP} SCOP: f.13.1.1
Probab=21.54 E-value=3.5e+02 Score=25.70 Aligned_cols=40 Identities=10% Similarity=0.049 Sum_probs=20.8
Q ss_pred HHHHhhcchHHHHHhHH--HHHHHHHHHHHHHHHHhhhhHHHHH
Q 011545 111 LMFGEILPQAVCTRYGL--TVGATMAPIVRVLLCLFFPISYPIS 152 (483)
Q Consensus 111 lvfGEiiPK~la~~~p~--~ia~~~a~~l~~l~~l~~Plv~~l~ 152 (483)
.++++. .|+. .+.+. +-+....+.+-.+.|.+||++|.+.
T Consensus 145 ~l~~~~-~~~a-~~~~~~v~~~f~~l~~~v~v~W~iYPI~w~l~ 186 (261)
T 1xio_A 145 GIWNPL-RAKT-RTQSSELANLYDKLVTYFTVLWIGYPIVWIIG 186 (261)
T ss_dssp HHHTHH-HHHH-TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHH-HHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 455554 5533 23332 2233333455566777788887553
No 132
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=20.19 E-value=96 Score=20.79 Aligned_cols=18 Identities=11% Similarity=0.390 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 011545 14 FFVFVLGIIALVCFAGLM 31 (483)
Q Consensus 14 ~w~~lllil~Ll~lsafF 31 (483)
.|..+++.++.+++|..|
T Consensus 18 y~GLLlifvlavlFssyf 35 (37)
T 3arc_L 18 YLGLLLILVLALLFSSYF 35 (37)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhc
Confidence 566666666667777765
Done!