Query 011546
Match_columns 483
No_of_seqs 201 out of 859
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 10:23:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011546.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011546hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zkd_A DUF185; NESG, RPR58, st 100.0 3E-101 1E-105 800.1 33.0 360 82-483 3-364 (387)
2 4f3n_A Uncharacterized ACR, CO 100.0 5.5E-96 2E-100 768.4 33.8 354 83-483 58-424 (432)
3 4gek_A TRNA (CMO5U34)-methyltr 97.4 0.00073 2.5E-08 65.9 10.8 83 125-213 26-118 (261)
4 3fut_A Dimethyladenosine trans 96.1 0.026 8.7E-07 55.6 10.3 67 123-212 23-89 (271)
5 4htf_A S-adenosylmethionine-de 96.0 0.039 1.3E-06 53.1 10.9 65 138-212 47-111 (285)
6 1kpg_A CFA synthase;, cyclopro 95.9 0.052 1.8E-06 52.1 11.5 58 147-212 51-108 (287)
7 1xtp_A LMAJ004091AAA; SGPP, st 95.9 0.055 1.9E-06 50.6 11.4 59 146-212 79-137 (254)
8 3gru_A Dimethyladenosine trans 95.9 0.023 7.9E-07 56.6 9.0 67 124-212 27-93 (295)
9 3bus_A REBM, methyltransferase 95.9 0.058 2E-06 51.2 11.5 56 149-212 50-105 (273)
10 3hem_A Cyclopropane-fatty-acyl 95.8 0.073 2.5E-06 51.7 12.1 62 143-212 55-116 (302)
11 3tqs_A Ribosomal RNA small sub 95.8 0.039 1.3E-06 53.6 10.0 47 157-212 26-72 (255)
12 2aot_A HMT, histamine N-methyl 95.8 0.015 5.2E-07 56.5 7.1 74 137-212 28-103 (292)
13 2o57_A Putative sarcosine dime 95.8 0.087 3E-06 50.8 12.4 48 157-212 79-126 (297)
14 1pjz_A Thiopurine S-methyltran 95.8 0.026 9E-07 52.1 8.3 53 150-211 12-64 (203)
15 3gjy_A Spermidine synthase; AP 95.7 0.022 7.7E-07 57.4 8.2 67 139-212 68-134 (317)
16 2f8l_A Hypothetical protein LM 95.7 0.038 1.3E-06 55.3 9.8 77 127-212 104-180 (344)
17 2fk8_A Methoxy mycolic acid sy 95.6 0.084 2.9E-06 51.6 11.9 58 147-212 77-134 (318)
18 3lcc_A Putative methyl chlorid 95.6 0.052 1.8E-06 50.5 9.8 53 151-213 58-110 (235)
19 3hnr_A Probable methyltransfer 95.5 0.036 1.2E-06 50.8 8.3 43 161-212 46-88 (220)
20 3bxo_A N,N-dimethyltransferase 95.5 0.056 1.9E-06 50.0 9.6 53 149-211 30-82 (239)
21 3dlc_A Putative S-adenosyl-L-m 95.5 0.057 1.9E-06 48.9 9.3 50 155-213 39-88 (219)
22 3jwg_A HEN1, methyltransferase 95.5 0.093 3.2E-06 48.1 10.9 57 146-212 18-74 (219)
23 1wy7_A Hypothetical protein PH 95.4 0.1 3.5E-06 47.4 10.9 68 129-212 26-93 (207)
24 3iv6_A Putative Zn-dependent a 95.4 0.082 2.8E-06 51.7 10.6 53 152-213 37-89 (261)
25 4dzr_A Protein-(glutamine-N5) 95.3 0.023 8E-07 51.3 6.1 61 143-212 15-75 (215)
26 3jwh_A HEN1; methyltransferase 95.3 0.16 5.3E-06 46.6 11.8 44 162-212 31-74 (217)
27 3khk_A Type I restriction-modi 95.2 0.028 9.5E-07 60.6 7.1 74 127-212 223-304 (544)
28 3gu3_A Methyltransferase; alph 95.2 0.038 1.3E-06 53.5 7.4 48 159-212 21-68 (284)
29 2gs9_A Hypothetical protein TT 95.2 0.13 4.4E-06 46.8 10.7 56 143-211 20-76 (211)
30 2p35_A Trans-aconitate 2-methy 95.1 0.097 3.3E-06 49.0 10.0 52 152-210 25-76 (259)
31 3gwz_A MMCR; methyltransferase 95.1 0.11 3.7E-06 52.5 11.0 72 133-212 171-246 (369)
32 1ne2_A Hypothetical protein TA 95.1 0.12 4.3E-06 46.7 10.3 48 157-212 48-95 (200)
33 1vl5_A Unknown conserved prote 95.1 0.071 2.4E-06 50.4 8.9 44 160-212 37-80 (260)
34 3bkw_A MLL3908 protein, S-aden 95.0 0.12 4.1E-06 47.8 10.2 45 160-212 43-87 (243)
35 3i9f_A Putative type 11 methyl 95.0 0.037 1.3E-06 48.7 6.4 44 158-210 15-58 (170)
36 3lkd_A Type I restriction-modi 95.0 0.029 1E-06 60.5 6.7 74 127-212 195-269 (542)
37 2yxe_A Protein-L-isoaspartate 95.0 0.1 3.6E-06 47.6 9.6 47 160-212 77-123 (215)
38 3dh0_A SAM dependent methyltra 95.0 0.1 3.5E-06 47.6 9.4 51 156-212 33-83 (219)
39 3ujc_A Phosphoethanolamine N-m 95.0 0.12 4.2E-06 48.3 10.2 51 154-212 49-99 (266)
40 3ofk_A Nodulation protein S; N 94.9 0.12 4E-06 47.2 9.7 45 160-213 51-95 (216)
41 3ccf_A Cyclopropane-fatty-acyl 94.9 0.041 1.4E-06 52.8 6.8 43 160-211 57-99 (279)
42 3l8d_A Methyltransferase; stru 94.9 0.14 4.7E-06 47.5 10.1 42 161-211 54-95 (242)
43 3bkx_A SAM-dependent methyltra 94.8 0.24 8.3E-06 46.9 12.0 68 139-212 22-95 (275)
44 1x19_A CRTF-related protein; m 94.8 0.19 6.6E-06 50.2 11.6 74 131-212 153-234 (359)
45 2pbf_A Protein-L-isoaspartate 94.8 0.056 1.9E-06 50.0 7.1 91 110-212 40-130 (227)
46 1wzn_A SAM-dependent methyltra 94.7 0.092 3.1E-06 49.2 8.7 57 147-212 28-84 (252)
47 3lbf_A Protein-L-isoaspartate 94.7 0.15 5.2E-06 46.3 9.9 66 128-213 56-121 (210)
48 1vbf_A 231AA long hypothetical 94.7 0.17 5.9E-06 46.7 10.4 47 157-212 67-113 (231)
49 3ou2_A SAM-dependent methyltra 94.7 0.17 5.7E-06 45.9 10.1 40 161-209 47-86 (218)
50 3dtn_A Putative methyltransfer 94.7 0.12 4.2E-06 47.7 9.3 46 160-212 44-89 (234)
51 3uzu_A Ribosomal RNA small sub 94.7 0.062 2.1E-06 53.0 7.5 70 123-210 18-87 (279)
52 2xvm_A Tellurite resistance pr 94.7 0.16 5.4E-06 45.3 9.7 43 161-212 33-75 (199)
53 3pfg_A N-methyltransferase; N, 94.6 0.21 7E-06 47.2 10.9 54 148-211 39-92 (263)
54 3e23_A Uncharacterized protein 94.6 0.13 4.3E-06 47.0 9.0 42 161-211 44-85 (211)
55 3sm3_A SAM-dependent methyltra 94.6 0.14 4.9E-06 46.8 9.4 44 161-213 31-74 (235)
56 1qam_A ERMC' methyltransferase 94.6 0.054 1.8E-06 51.8 6.7 48 156-212 26-73 (244)
57 3p9n_A Possible methyltransfer 94.6 0.1 3.5E-06 47.0 8.2 44 161-212 45-88 (189)
58 1r18_A Protein-L-isoaspartate( 94.6 0.05 1.7E-06 50.6 6.3 92 110-212 44-135 (227)
59 3hm2_A Precorrin-6Y C5,15-meth 94.5 0.079 2.7E-06 46.6 7.2 50 156-212 21-70 (178)
60 2okc_A Type I restriction enzy 94.5 0.091 3.1E-06 54.7 8.7 75 127-212 149-229 (445)
61 3h2b_A SAM-dependent methyltra 94.5 0.16 5.4E-06 45.9 9.3 41 162-211 43-83 (203)
62 2yqz_A Hypothetical protein TT 94.5 0.2 7E-06 46.8 10.4 44 159-211 38-81 (263)
63 2p7i_A Hypothetical protein; p 94.5 0.14 4.7E-06 47.2 9.0 55 147-212 31-85 (250)
64 3mgg_A Methyltransferase; NYSG 94.4 0.12 4.1E-06 49.2 8.7 47 159-212 36-82 (276)
65 3dli_A Methyltransferase; PSI- 94.3 0.045 1.5E-06 51.2 5.4 41 161-210 42-82 (240)
66 2pxx_A Uncharacterized protein 94.3 0.15 5.2E-06 46.0 8.8 44 161-212 43-86 (215)
67 3g5l_A Putative S-adenosylmeth 94.3 0.25 8.6E-06 46.2 10.6 49 156-212 40-88 (253)
68 3cgg_A SAM-dependent methyltra 94.2 0.3 1E-05 43.0 10.5 43 160-211 46-88 (195)
69 3vc1_A Geranyl diphosphate 2-C 94.2 0.3 1E-05 47.7 11.4 51 154-212 110-161 (312)
70 2yxd_A Probable cobalt-precorr 94.2 0.11 3.7E-06 45.5 7.3 44 160-212 35-78 (183)
71 1qyr_A KSGA, high level kasuga 94.2 0.058 2E-06 52.3 5.9 43 161-212 22-64 (252)
72 3i53_A O-methyltransferase; CO 94.1 0.094 3.2E-06 51.8 7.6 72 133-212 138-213 (332)
73 1y8c_A S-adenosylmethionine-de 94.1 0.084 2.9E-06 48.8 6.7 58 145-212 23-80 (246)
74 3grz_A L11 mtase, ribosomal pr 94.1 0.28 9.6E-06 44.4 10.2 44 161-212 61-104 (205)
75 3evz_A Methyltransferase; NYSG 94.1 0.24 8E-06 45.7 9.7 45 160-212 55-100 (230)
76 1ri5_A MRNA capping enzyme; me 94.0 0.14 4.8E-06 48.9 8.4 62 143-212 47-108 (298)
77 1jsx_A Glucose-inhibited divis 94.0 0.11 3.6E-06 47.2 7.1 44 162-212 67-110 (207)
78 3orh_A Guanidinoacetate N-meth 94.0 0.054 1.8E-06 51.3 5.2 44 161-212 61-104 (236)
79 3e05_A Precorrin-6Y C5,15-meth 94.0 0.12 4E-06 47.1 7.4 50 156-212 36-85 (204)
80 3ocj_A Putative exported prote 94.0 0.077 2.6E-06 51.8 6.4 49 159-213 117-165 (305)
81 3f4k_A Putative methyltransfer 93.9 0.25 8.5E-06 46.2 9.6 46 159-212 45-90 (257)
82 3lst_A CALO1 methyltransferase 93.8 0.16 5.5E-06 50.7 8.7 64 133-203 153-220 (348)
83 1zq9_A Probable dimethyladenos 93.8 0.12 4E-06 50.7 7.4 48 156-212 24-71 (285)
84 1tw3_A COMT, carminomycin 4-O- 93.8 0.2 7E-06 49.8 9.3 71 134-212 153-227 (360)
85 1jg1_A PIMT;, protein-L-isoasp 93.7 0.21 7E-06 46.7 8.7 44 161-212 92-135 (235)
86 3m70_A Tellurite resistance pr 93.7 0.18 6E-06 48.4 8.4 43 161-212 121-163 (286)
87 4fsd_A Arsenic methyltransfera 93.7 0.22 7.4E-06 50.6 9.4 46 161-212 84-129 (383)
88 2ex4_A Adrenal gland protein A 93.7 0.18 6.3E-06 47.0 8.2 45 161-213 80-124 (241)
89 2gb4_A Thiopurine S-methyltran 93.6 0.2 6.8E-06 48.2 8.7 42 161-211 69-110 (252)
90 1nkv_A Hypothetical protein YJ 93.6 0.15 5.3E-06 47.6 7.6 49 156-212 32-80 (256)
91 3mcz_A O-methyltransferase; ad 93.6 0.26 9E-06 48.8 9.7 72 132-211 147-222 (352)
92 4e2x_A TCAB9; kijanose, tetron 93.6 0.18 6E-06 51.5 8.6 62 140-210 87-148 (416)
93 3mti_A RRNA methylase; SAM-dep 93.6 0.13 4.3E-06 45.9 6.7 44 160-212 22-65 (185)
94 1dus_A MJ0882; hypothetical pr 93.6 0.14 4.7E-06 45.2 6.9 44 160-212 52-95 (194)
95 1xxl_A YCGJ protein; structura 93.6 0.18 6.2E-06 47.2 8.0 48 156-212 17-64 (239)
96 3kkz_A Uncharacterized protein 93.5 0.29 1E-05 46.4 9.5 46 159-212 45-90 (267)
97 3eey_A Putative rRNA methylase 93.4 0.14 4.8E-06 46.1 6.7 47 161-213 23-69 (197)
98 1qzz_A RDMB, aclacinomycin-10- 93.4 0.16 5.4E-06 50.8 7.7 51 154-212 176-226 (374)
99 3ftd_A Dimethyladenosine trans 93.3 0.091 3.1E-06 50.7 5.6 62 130-210 12-73 (249)
100 1l3i_A Precorrin-6Y methyltran 93.3 0.15 5.3E-06 44.8 6.7 47 157-212 30-76 (192)
101 2p8j_A S-adenosylmethionine-de 93.3 0.39 1.4E-05 43.2 9.6 44 161-212 24-67 (209)
102 3u81_A Catechol O-methyltransf 93.2 0.17 5.7E-06 46.9 7.1 45 162-212 60-104 (221)
103 3m33_A Uncharacterized protein 93.2 0.43 1.5E-05 44.2 9.8 63 130-210 27-89 (226)
104 1u2z_A Histone-lysine N-methyl 93.2 0.079 2.7E-06 55.6 5.2 53 148-207 230-282 (433)
105 2ih2_A Modification methylase 93.0 0.09 3.1E-06 53.4 5.4 62 126-204 16-77 (421)
106 3bwc_A Spermidine synthase; SA 93.0 0.23 7.9E-06 49.0 8.2 61 140-212 80-140 (304)
107 3g5t_A Trans-aconitate 3-methy 93.0 0.22 7.5E-06 48.2 7.9 47 160-212 36-82 (299)
108 2esr_A Methyltransferase; stru 93.0 0.13 4.4E-06 45.5 5.7 45 161-213 32-76 (177)
109 2gpy_A O-methyltransferase; st 92.9 0.2 6.8E-06 46.6 7.2 44 162-212 56-99 (233)
110 2fhp_A Methylase, putative; al 92.9 0.16 5.5E-06 44.9 6.2 44 161-212 45-88 (187)
111 1iy9_A Spermidine synthase; ro 92.8 0.23 7.7E-06 48.4 7.6 61 140-212 60-120 (275)
112 3dr5_A Putative O-methyltransf 92.8 0.32 1.1E-05 45.6 8.5 46 162-213 58-103 (221)
113 2b3t_A Protein methyltransfera 92.8 0.25 8.6E-06 47.4 7.9 69 128-212 86-154 (276)
114 3adn_A Spermidine synthase; am 92.8 0.26 8.8E-06 48.7 8.1 62 139-212 67-128 (294)
115 1ve3_A Hypothetical protein PH 92.8 0.18 6.3E-06 46.0 6.6 43 161-212 39-81 (227)
116 3cc8_A Putative methyltransfer 92.7 0.25 8.7E-06 44.8 7.4 43 160-211 32-74 (230)
117 2avd_A Catechol-O-methyltransf 92.6 0.24 8.2E-06 45.6 7.3 45 162-212 71-115 (229)
118 2ar0_A M.ecoki, type I restric 92.6 0.26 9E-06 52.9 8.5 75 127-212 147-232 (541)
119 2ip2_A Probable phenazine-spec 92.6 0.4 1.4E-05 47.1 9.2 71 133-212 138-211 (334)
120 3tr6_A O-methyltransferase; ce 92.6 0.31 1.1E-05 44.8 7.9 45 162-212 66-110 (225)
121 3uwp_A Histone-lysine N-methyl 92.6 0.2 6.8E-06 52.6 7.2 66 138-210 151-216 (438)
122 3mb5_A SAM-dependent methyltra 92.5 0.3 1E-05 45.8 7.9 51 156-212 89-139 (255)
123 1zx0_A Guanidinoacetate N-meth 92.5 0.17 5.8E-06 47.3 6.0 44 161-212 61-104 (236)
124 1p91_A Ribosomal RNA large sub 92.5 0.37 1.3E-05 45.6 8.6 44 161-211 86-129 (269)
125 3c3p_A Methyltransferase; NP_9 92.5 0.38 1.3E-05 43.9 8.3 45 162-212 58-102 (210)
126 3thr_A Glycine N-methyltransfe 92.5 0.24 8.2E-06 47.4 7.3 54 146-211 46-99 (293)
127 3duw_A OMT, O-methyltransferas 92.5 0.36 1.2E-05 44.4 8.1 45 162-212 60-104 (223)
128 3c3y_A Pfomt, O-methyltransfer 92.4 0.31 1.1E-05 46.0 7.8 45 162-212 72-116 (237)
129 1sui_A Caffeoyl-COA O-methyltr 92.4 0.31 1.1E-05 46.5 7.9 45 162-212 81-125 (247)
130 3fzg_A 16S rRNA methylase; met 92.4 0.19 6.6E-06 47.4 6.2 46 161-213 50-95 (200)
131 3e8s_A Putative SAM dependent 92.4 0.14 4.8E-06 46.5 5.2 41 161-210 53-93 (227)
132 4dcm_A Ribosomal RNA large sub 92.4 0.29 1E-05 50.0 8.2 45 161-212 223-267 (375)
133 1dl5_A Protein-L-isoaspartate 92.4 0.56 1.9E-05 46.2 10.0 50 157-212 72-121 (317)
134 2o07_A Spermidine synthase; st 92.4 0.27 9.2E-06 48.7 7.7 63 138-212 78-140 (304)
135 2i7c_A Spermidine synthase; tr 92.3 0.28 9.7E-06 47.8 7.7 49 158-213 76-124 (283)
136 2hnk_A SAM-dependent O-methylt 92.3 0.38 1.3E-05 45.0 8.2 45 162-212 62-106 (239)
137 3njr_A Precorrin-6Y methylase; 92.2 0.26 9E-06 45.4 6.9 47 157-212 52-98 (204)
138 3ntv_A MW1564 protein; rossman 92.2 0.35 1.2E-05 45.2 7.9 45 162-213 73-117 (232)
139 1inl_A Spermidine synthase; be 92.2 0.29 9.8E-06 48.2 7.5 61 140-212 75-135 (296)
140 1i9g_A Hypothetical protein RV 92.2 0.3 1E-05 46.5 7.5 51 156-212 95-145 (280)
141 1ws6_A Methyltransferase; stru 92.1 0.47 1.6E-05 41.0 8.1 42 162-212 43-84 (171)
142 3dmg_A Probable ribosomal RNA 92.1 0.49 1.7E-05 48.5 9.4 42 162-212 235-276 (381)
143 2fca_A TRNA (guanine-N(7)-)-me 92.1 0.19 6.4E-06 46.6 5.8 44 162-212 40-83 (213)
144 2pwy_A TRNA (adenine-N(1)-)-me 92.0 0.36 1.2E-05 45.1 7.7 51 156-212 92-142 (258)
145 1nv8_A HEMK protein; class I a 92.0 0.58 2E-05 45.7 9.4 69 128-212 99-167 (284)
146 3mq2_A 16S rRNA methyltransfer 91.9 0.24 8.2E-06 45.4 6.3 40 160-206 27-66 (218)
147 1yzh_A TRNA (guanine-N(7)-)-me 91.9 0.21 7.1E-06 45.9 5.8 44 162-212 43-86 (214)
148 2h1r_A Dimethyladenosine trans 91.9 0.23 7.9E-06 48.9 6.5 67 124-212 19-85 (299)
149 3tfw_A Putative O-methyltransf 91.9 0.4 1.4E-05 45.4 8.0 45 162-212 65-109 (248)
150 1xj5_A Spermidine synthase 1; 91.8 0.35 1.2E-05 48.7 7.8 62 139-212 104-165 (334)
151 3gdh_A Trimethylguanosine synt 91.8 0.38 1.3E-05 44.7 7.6 42 162-212 80-121 (241)
152 1fbn_A MJ fibrillarin homologu 91.8 0.19 6.4E-06 46.9 5.4 50 156-212 70-119 (230)
153 3dxy_A TRNA (guanine-N(7)-)-me 91.8 0.26 9E-06 46.1 6.5 43 162-211 36-78 (218)
154 2r3s_A Uncharacterized protein 91.8 0.52 1.8E-05 46.1 8.9 71 133-211 132-208 (335)
155 2avn_A Ubiquinone/menaquinone 91.7 0.46 1.6E-05 44.9 8.1 42 161-211 55-96 (260)
156 1o54_A SAM-dependent O-methylt 91.7 0.41 1.4E-05 45.9 7.8 51 156-212 108-158 (277)
157 3ege_A Putative methyltransfer 91.6 0.28 9.5E-06 46.6 6.5 40 157-205 31-70 (261)
158 3ufb_A Type I restriction-modi 91.6 0.32 1.1E-05 52.1 7.6 75 126-211 194-274 (530)
159 2yvl_A TRMI protein, hypotheti 91.5 0.43 1.5E-05 44.3 7.6 48 156-212 87-134 (248)
160 1g8a_A Fibrillarin-like PRE-rR 91.4 0.22 7.5E-06 46.0 5.4 51 156-212 69-119 (227)
161 1uir_A Polyamine aminopropyltr 91.4 0.31 1.1E-05 48.3 6.9 62 139-212 61-122 (314)
162 2kw5_A SLR1183 protein; struct 91.4 0.22 7.4E-06 44.9 5.2 41 163-212 32-72 (202)
163 3g2m_A PCZA361.24; SAM-depende 91.3 0.27 9.1E-06 47.6 6.1 42 162-212 84-125 (299)
164 1xdz_A Methyltransferase GIDB; 91.3 0.3 1E-05 45.8 6.3 45 161-212 71-115 (240)
165 3q87_B N6 adenine specific DNA 91.2 0.24 8.4E-06 44.1 5.3 35 162-206 25-59 (170)
166 3d2l_A SAM-dependent methyltra 91.2 0.34 1.2E-05 44.7 6.5 41 162-212 35-75 (243)
167 3bgv_A MRNA CAP guanine-N7 met 91.2 0.63 2.2E-05 45.3 8.7 62 142-212 17-78 (313)
168 4df3_A Fibrillarin-like rRNA/T 91.0 0.27 9.1E-06 47.3 5.7 60 146-211 63-122 (233)
169 1i4w_A Mitochondrial replicati 91.0 0.28 9.6E-06 50.1 6.1 82 113-211 15-102 (353)
170 1i1n_A Protein-L-isoaspartate 90.9 0.6 2.1E-05 42.9 7.9 46 161-212 78-123 (226)
171 1nt2_A Fibrillarin-like PRE-rR 90.8 0.26 8.8E-06 45.8 5.3 42 156-204 53-94 (210)
172 2b2c_A Spermidine synthase; be 90.8 0.28 9.6E-06 48.9 5.9 47 160-213 108-154 (314)
173 3cbg_A O-methyltransferase; cy 90.8 0.39 1.3E-05 45.0 6.6 45 162-212 74-118 (232)
174 2pt6_A Spermidine synthase; tr 90.7 0.39 1.3E-05 47.9 6.9 62 140-213 101-162 (321)
175 1mjf_A Spermidine synthase; sp 90.7 0.24 8.2E-06 48.2 5.2 45 159-211 74-118 (281)
176 1ej0_A FTSJ; methyltransferase 90.6 0.55 1.9E-05 40.3 6.9 36 161-203 23-58 (180)
177 2pjd_A Ribosomal RNA small sub 90.6 0.39 1.3E-05 47.9 6.7 44 162-212 198-241 (343)
178 3reo_A (ISO)eugenol O-methyltr 90.5 0.45 1.6E-05 48.0 7.1 63 133-203 171-238 (368)
179 2cmg_A Spermidine synthase; tr 90.4 0.23 8E-06 48.1 4.8 46 158-212 70-115 (262)
180 3g07_A 7SK snRNA methylphospha 90.1 0.33 1.1E-05 47.2 5.5 46 161-213 47-92 (292)
181 1o9g_A RRNA methyltransferase; 90.0 0.62 2.1E-05 43.8 7.2 48 160-212 51-98 (250)
182 3ckk_A TRNA (guanine-N(7)-)-me 89.9 0.33 1.1E-05 46.0 5.3 44 161-211 47-90 (235)
183 2h00_A Methyltransferase 10 do 89.8 0.52 1.8E-05 44.3 6.5 45 161-212 66-110 (254)
184 2ozv_A Hypothetical protein AT 89.7 0.55 1.9E-05 44.9 6.7 46 161-213 37-82 (260)
185 3kr9_A SAM-dependent methyltra 89.7 1 3.6E-05 42.9 8.5 45 162-213 17-61 (225)
186 3tm4_A TRNA (guanine N2-)-meth 89.6 1 3.4E-05 45.7 8.9 45 161-212 218-262 (373)
187 2ipx_A RRNA 2'-O-methyltransfe 89.3 0.41 1.4E-05 44.5 5.3 42 156-203 73-114 (233)
188 2plw_A Ribosomal RNA methyltra 89.2 0.67 2.3E-05 41.6 6.5 50 148-202 9-59 (201)
189 2vdv_E TRNA (guanine-N(7)-)-me 89.1 0.51 1.7E-05 44.4 5.9 46 160-212 49-94 (246)
190 3r3h_A O-methyltransferase, SA 89.1 0.35 1.2E-05 46.0 4.7 44 162-211 62-105 (242)
191 2nxc_A L11 mtase, ribosomal pr 89.1 1 3.5E-05 42.8 8.1 43 161-212 121-163 (254)
192 1yb2_A Hypothetical protein TA 88.9 0.61 2.1E-05 44.8 6.4 51 156-212 106-156 (275)
193 2ift_A Putative methylase HI07 88.9 0.6 2E-05 42.7 6.1 43 162-212 55-97 (201)
194 3id6_C Fibrillarin-like rRNA/T 88.9 0.45 1.5E-05 45.6 5.4 50 148-203 64-113 (232)
195 3ggd_A SAM-dependent methyltra 88.9 0.42 1.4E-05 44.5 5.0 42 161-211 57-98 (245)
196 4azs_A Methyltransferase WBDD; 88.9 1.3 4.4E-05 47.6 9.5 46 154-210 62-107 (569)
197 1fp1_D Isoliquiritigenin 2'-O- 88.8 0.79 2.7E-05 46.0 7.4 63 133-203 177-244 (372)
198 1fp2_A Isoflavone O-methyltran 88.5 0.37 1.3E-05 48.1 4.6 63 133-203 156-223 (352)
199 3g89_A Ribosomal RNA small sub 88.5 1.1 3.6E-05 42.9 7.7 46 160-212 80-125 (249)
200 3lec_A NADB-rossmann superfami 88.3 1.5 5E-05 42.1 8.5 46 161-213 22-67 (230)
201 2y1w_A Histone-arginine methyl 88.2 0.73 2.5E-05 46.1 6.7 43 161-212 51-93 (348)
202 2fpo_A Methylase YHHF; structu 88.2 0.79 2.7E-05 41.9 6.4 43 162-212 56-98 (202)
203 2vdw_A Vaccinia virus capping 88.1 1.4 4.7E-05 43.4 8.5 45 160-212 48-92 (302)
204 3dp7_A SAM-dependent methyltra 87.9 1.4 4.7E-05 44.2 8.5 44 161-212 180-223 (363)
205 2bm8_A Cephalosporin hydroxyla 87.9 1.1 3.6E-05 42.4 7.2 39 162-203 83-121 (236)
206 2b25_A Hypothetical protein; s 87.8 1.1 3.7E-05 44.3 7.5 47 160-212 105-151 (336)
207 3bzb_A Uncharacterized protein 87.7 0.65 2.2E-05 45.0 5.7 59 142-211 64-123 (281)
208 3gnl_A Uncharacterized protein 87.7 1.5 5E-05 42.5 8.2 46 161-213 22-67 (244)
209 3p2e_A 16S rRNA methylase; met 87.5 0.39 1.3E-05 45.2 3.9 37 161-204 25-62 (225)
210 1yub_A Ermam, rRNA methyltrans 87.5 0.28 9.5E-06 46.5 2.9 57 130-206 10-66 (245)
211 1af7_A Chemotaxis receptor met 86.9 2.4 8.2E-05 41.4 9.3 118 82-211 36-157 (274)
212 3opn_A Putative hemolysin; str 86.9 0.91 3.1E-05 43.0 6.1 47 152-206 28-75 (232)
213 4hg2_A Methyltransferase type 86.9 0.4 1.4E-05 46.3 3.7 37 160-205 39-75 (257)
214 1zg3_A Isoflavanone 4'-O-methy 86.8 0.74 2.5E-05 45.9 5.7 61 133-200 159-226 (358)
215 3p9c_A Caffeic acid O-methyltr 86.8 1.3 4.3E-05 44.7 7.4 62 133-202 169-235 (364)
216 3k0b_A Predicted N6-adenine-sp 86.6 3.1 0.00011 42.7 10.4 67 143-212 187-284 (393)
217 3s1s_A Restriction endonucleas 86.4 0.42 1.4E-05 54.0 3.9 72 127-207 293-364 (878)
218 3ldu_A Putative methylase; str 86.4 1.7 5.7E-05 44.5 8.2 67 143-212 181-278 (385)
219 2fyt_A Protein arginine N-meth 86.4 1.1 3.7E-05 44.8 6.7 44 160-212 64-107 (340)
220 2i62_A Nicotinamide N-methyltr 86.1 0.8 2.7E-05 42.7 5.2 45 160-212 56-100 (265)
221 4gqb_A Protein arginine N-meth 85.9 2.8 9.5E-05 46.0 10.0 61 139-202 335-396 (637)
222 3htx_A HEN1; HEN1, small RNA m 85.9 2.1 7E-05 48.7 9.1 86 162-264 723-811 (950)
223 2nyu_A Putative ribosomal RNA 85.8 1.6 5.4E-05 38.8 6.9 54 149-202 10-66 (196)
224 3fpf_A Mtnas, putative unchara 85.8 1.8 6.3E-05 43.0 7.9 51 155-212 117-167 (298)
225 3lpm_A Putative methyltransfer 85.7 1 3.4E-05 42.7 5.7 44 161-212 50-93 (259)
226 2a14_A Indolethylamine N-methy 85.2 0.5 1.7E-05 45.1 3.3 61 145-213 37-100 (263)
227 3ldg_A Putative uncharacterize 85.1 3.6 0.00012 42.1 9.9 67 143-212 180-277 (384)
228 2qfm_A Spermine synthase; sper 84.9 0.91 3.1E-05 46.5 5.3 46 159-212 187-232 (364)
229 1g6q_1 HnRNP arginine N-methyl 83.6 1.2 4.1E-05 44.1 5.5 42 162-212 40-81 (328)
230 4a6d_A Hydroxyindole O-methylt 83.1 7.1 0.00024 38.9 11.0 72 133-212 148-223 (353)
231 3frh_A 16S rRNA methylase; met 82.9 2.1 7.2E-05 41.7 6.6 44 159-212 104-147 (253)
232 3r0q_C Probable protein argini 82.7 1.8 6.1E-05 43.9 6.4 45 159-212 62-106 (376)
233 3q7e_A Protein arginine N-meth 82.5 1.4 4.8E-05 44.1 5.5 41 162-211 68-108 (349)
234 2g72_A Phenylethanolamine N-me 82.3 1.6 5.6E-05 41.7 5.7 45 160-212 71-115 (289)
235 3tma_A Methyltransferase; thum 82.1 2.3 7.8E-05 42.4 6.9 50 157-212 200-249 (354)
236 3ajd_A Putative methyltransfer 81.1 3.4 0.00011 39.7 7.4 68 128-212 62-129 (274)
237 1vlm_A SAM-dependent methyltra 80.7 1.4 4.9E-05 40.3 4.4 37 161-210 48-84 (219)
238 2qe6_A Uncharacterized protein 80.6 3.9 0.00013 39.5 7.7 44 162-212 79-125 (274)
239 2k4m_A TR8_protein, UPF0146 pr 80.5 2.2 7.6E-05 38.5 5.4 54 135-202 16-70 (153)
240 2igt_A SAM dependent methyltra 79.5 4.4 0.00015 40.4 7.9 42 162-212 155-196 (332)
241 2zfu_A Nucleomethylin, cerebra 78.6 1.8 6.2E-05 39.2 4.4 30 161-202 68-97 (215)
242 3b3j_A Histone-arginine methyl 78.6 2.5 8.5E-05 44.6 6.0 42 161-211 159-200 (480)
243 1m6y_A S-adenosyl-methyltransf 77.5 3.9 0.00013 40.5 6.7 45 162-213 28-72 (301)
244 3a27_A TYW2, uncharacterized p 77.3 2 6.7E-05 41.4 4.4 45 161-212 120-164 (272)
245 3dou_A Ribosomal RNA large sub 77.2 2.8 9.7E-05 38.1 5.2 46 148-202 12-58 (191)
246 4hc4_A Protein arginine N-meth 76.7 6.9 0.00023 40.0 8.5 41 163-212 86-126 (376)
247 1uwv_A 23S rRNA (uracil-5-)-me 76.5 5 0.00017 41.4 7.5 59 142-212 271-329 (433)
248 3hp7_A Hemolysin, putative; st 75.5 4 0.00014 40.4 6.2 49 150-206 74-123 (291)
249 2qy6_A UPF0209 protein YFCK; s 74.6 3.8 0.00013 39.6 5.6 43 160-202 60-107 (257)
250 3lcv_B Sisomicin-gentamicin re 74.5 2.2 7.4E-05 42.2 3.8 48 159-213 131-178 (281)
251 3ua3_A Protein arginine N-meth 74.5 6.2 0.00021 43.9 7.8 42 161-202 410-457 (745)
252 2frn_A Hypothetical protein PH 74.3 2.4 8E-05 40.9 4.1 43 162-212 127-169 (278)
253 2jjq_A Uncharacterized RNA met 73.3 6.9 0.00023 40.5 7.6 42 162-212 292-333 (425)
254 2zig_A TTHA0409, putative modi 71.5 4.4 0.00015 39.5 5.3 57 144-213 223-279 (297)
255 3v97_A Ribosomal RNA large sub 70.8 13 0.00046 40.9 9.6 67 143-212 176-277 (703)
256 1ixk_A Methyltransferase; open 70.0 7.7 0.00026 38.1 6.8 45 162-212 120-164 (315)
257 3bt7_A TRNA (uracil-5-)-methyl 67.2 7.3 0.00025 39.1 6.0 57 143-212 200-256 (369)
258 3axs_A Probable N(2),N(2)-dime 66.3 11 0.00038 38.7 7.2 77 126-212 22-98 (392)
259 1sqg_A SUN protein, FMU protei 64.8 10 0.00036 38.8 6.7 67 128-212 225-291 (429)
260 3o4f_A Spermidine synthase; am 64.7 9.1 0.00031 37.9 6.0 62 139-212 67-128 (294)
261 1wxx_A TT1595, hypothetical pr 62.9 7.7 0.00026 39.1 5.2 42 162-212 211-252 (382)
262 2dul_A N(2),N(2)-dimethylguano 62.4 16 0.00056 37.1 7.6 61 140-213 33-93 (378)
263 2b78_A Hypothetical protein SM 61.9 8.3 0.00028 39.1 5.3 43 162-212 214-256 (385)
264 2oyr_A UPF0341 protein YHIQ; a 60.9 10 0.00036 36.5 5.6 42 162-212 90-131 (258)
265 3m4x_A NOL1/NOP2/SUN family pr 60.1 24 0.00081 37.0 8.5 45 162-212 107-151 (456)
266 3m6w_A RRNA methylase; rRNA me 59.6 24 0.00081 37.1 8.4 80 116-212 62-147 (464)
267 2qm3_A Predicted methyltransfe 58.2 23 0.0008 35.4 7.8 43 162-212 174-216 (373)
268 3c0k_A UPF0064 protein YCCW; P 57.5 10 0.00034 38.4 5.0 43 162-212 222-264 (396)
269 2oxt_A Nucleoside-2'-O-methylt 57.3 9.6 0.00033 36.7 4.6 32 161-202 75-106 (265)
270 2r6z_A UPF0341 protein in RSP 56.8 9.1 0.00031 36.7 4.3 34 162-204 85-118 (258)
271 2as0_A Hypothetical protein PH 54.7 11 0.00037 38.1 4.7 43 162-212 219-261 (396)
272 2yx1_A Hypothetical protein MJ 53.1 8.7 0.0003 38.1 3.6 41 162-212 197-237 (336)
273 2wa2_A Non-structural protein 52.8 11 0.00038 36.5 4.3 32 161-202 83-114 (276)
274 2yxl_A PH0851 protein, 450AA l 52.8 18 0.00062 37.3 6.1 45 162-212 261-305 (450)
275 3sso_A Methyltransferase; macr 51.2 20 0.00067 37.4 5.9 38 160-203 216-259 (419)
276 3ll7_A Putative methyltransfer 48.9 15 0.00051 38.0 4.7 68 131-212 68-136 (410)
277 3pvc_A TRNA 5-methylaminomethy 48.2 24 0.00083 38.3 6.4 61 150-211 49-114 (689)
278 3giw_A Protein of unknown func 47.7 44 0.0015 32.7 7.6 46 162-213 80-127 (277)
279 4dmg_A Putative uncharacterize 43.7 27 0.00091 35.6 5.6 42 162-212 216-257 (393)
280 3v97_A Ribosomal RNA large sub 43.5 39 0.0013 37.2 7.2 43 162-212 541-583 (703)
281 3k6r_A Putative transferase PH 42.5 20 0.00067 35.0 4.1 43 162-212 127-169 (278)
282 1g60_A Adenine-specific methyl 41.8 28 0.00097 32.9 5.1 57 144-213 200-256 (260)
283 3c6k_A Spermine synthase; sper 41.2 32 0.0011 35.3 5.6 44 161-212 206-249 (381)
284 3ps9_A TRNA 5-methylaminomethy 40.8 30 0.001 37.3 5.8 55 151-206 58-117 (676)
285 2frx_A Hypothetical protein YE 40.7 45 0.0015 34.9 6.9 45 162-212 119-163 (479)
286 2b9e_A NOL1/NOP2/SUN domain fa 39.9 48 0.0016 32.5 6.6 46 162-213 104-149 (309)
287 2ba3_A NIKA; dimer, bacterial 31.0 41 0.0014 23.8 3.3 28 83-112 23-50 (51)
288 2p41_A Type II methyltransfera 30.2 41 0.0014 32.9 4.2 28 162-199 84-111 (305)
289 3vyw_A MNMC2; tRNA wobble urid 30.1 68 0.0023 31.9 5.8 68 128-201 63-136 (308)
290 3cvo_A Methyltransferase-like 29.1 98 0.0034 28.6 6.4 42 162-213 32-73 (202)
291 2vz8_A Fatty acid synthase; tr 27.3 17 0.0006 45.8 1.1 49 161-211 1241-1289(2512)
292 2py6_A Methyltransferase FKBM; 26.7 97 0.0033 31.5 6.5 48 160-212 226-273 (409)
293 3mag_A VP39; methylated adenin 25.9 1E+02 0.0035 30.6 6.1 55 145-202 45-99 (307)
294 3b5i_A S-adenosyl-L-methionine 23.3 1E+02 0.0036 31.2 5.9 23 159-181 51-73 (374)
295 2k9i_A Plasmid PRN1, complete 22.3 75 0.0026 22.3 3.4 29 83-113 17-45 (55)
No 1
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=100.00 E-value=3.4e-101 Score=800.07 Aligned_cols=360 Identities=37% Similarity=0.676 Sum_probs=321.7
Q ss_pred ChHHHHHHHHHHHhhcCCcccHHHHHHHhhcCCCCcccCCCCCCCCCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCC
Q 011546 82 LESELVKHLKGIIKFRGGPISVAEYMEEVLTNPKAGFYINRDVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNR 161 (483)
Q Consensus 82 ~~~~L~~~i~~~I~~~~GpIsf~~FM~~aLY~P~~GYY~~~~~~G~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~ 161 (483)
++++|.++|++.|+.+ |||||++||++|||||++|||+++.+||+.|||||||||||+|||+||+|++++|+.+|.|.+
T Consensus 3 ~~~~L~~~i~~~I~~~-G~i~f~~fM~~aLy~P~~GYY~~~~~~G~~GDF~Tapeis~~FGe~la~~~~~~w~~~g~p~~ 81 (387)
T 1zkd_A 3 DQTALATEIKRLIKAA-GPMPVWRYMELCLGHPEHGYYVTRDPLGREGDFTTSPEISQMFGELLGLWSASVWKAADEPQT 81 (387)
T ss_dssp CSSHHHHHHHHHHHHH-CSEEHHHHHHHHHHCTTTCTTTCC--------CCSHHHHCHHHHHHHHHHHHHHHHHTTCCSS
T ss_pred chHHHHHHHHHHHHhc-CCeeHHHHHHHHhcCCCCcccCCCCCCCCCCCeeCCCchHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 3468999999999987 899999999999999999999998899999999999999999999999999999999999999
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcccccccCcCCcccceeeccCCCCceeeccc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLAGTPVSWHAA 241 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~~~~~~~~~~~~~~~~~~~~~~~v~W~~s 241 (483)
++|||+|||+|+||.|||++++..|+++++++|+|||+||.||++|+++|+.+ + +|.|+++
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~------------------~-~v~W~~~ 142 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI------------------R-NIHWHDS 142 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC------------------S-SEEEESS
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC------------------C-CeEEeCC
Confidence 99999999999999999999998899999999999999999999999999652 1 6999999
Q ss_pred cccCCCCCCEEEEEecccccccceEEEEcCCeeEEEEEEEcCCCceEEEeCCCCChhhH-HHHHHhhhhhcccCCCCcEE
Q 011546 242 LEQVPSGFPTIIVAHEFYDALPVHQFQKTTRGWCEKLVDIAEDSSFRFVLSPQPTPATL-FLLQRCKWAADKELEKLEHI 320 (483)
Q Consensus 242 l~~lp~~~~~iiiANEffDALPv~~f~~~~~~w~E~~V~~~~~~~f~~v~~p~~~~~~~-~l~~~~~~~~~~~~~~g~~~ 320 (483)
++++|.+ |+||||||||||||||+|++++++|+|++|+++++++|+|+..|.+++... ++.... ...++|+++
T Consensus 143 l~~lp~~-~~~viANE~fDAlPv~~~~~~~~~w~E~~V~~~~~g~~~~~~~~~~~~~~~~~l~~~~-----~~~~~G~~~ 216 (387)
T 1zkd_A 143 FEDVPEG-PAVILANEYFDVLPIHQAIKRETGWHERVIEIGASGELVFGVAADPIPGFEALLPPLA-----RLSPPGAVF 216 (387)
T ss_dssp GGGSCCS-SEEEEEESSGGGSCCEEEEEETTEEEEEEEEECTTSCEEEEECSSCCTTCGGGSCGGG-----GGCCTTCEE
T ss_pred hhhcCCC-CeEEEeccccccCceEEEEecCCeEEEEEEEECCCCcEEEecCCCCchhhhhhhhhhh-----ccCCCCcEE
Confidence 9999987 999999999999999999999999999999998888899999887665321 222111 135789999
Q ss_pred EEchhHHHHHHHHHHHhccCCeEEEEEeCCCCCC-cCCccceeccccccCCCCCCCccccccccCHHHHHHHHHHhcCce
Q 011546 321 EVCAKAMELTGAMAKRIGSDGGGALIIDYGLNGV-VTDSLQAIRKHKFVDLFDNPGSADLSAYVDFASISHSAEEASERV 399 (483)
Q Consensus 321 Ei~~~a~~~l~~la~~l~~~~G~~LiIDYG~~~~-~~gTLr~yr~H~~~dpl~~PG~~DITAhVdF~~L~~~a~~~g~g~ 399 (483)
|||+++. +++|+++|.+++|++|+||||+... .+|||||||+|+.+|||.+||++||||||||++|+++++++ |+
T Consensus 217 Ei~~~~~--~~~ia~~l~~~~G~~L~IDYG~~~~~~~gTL~~~~~H~~~dpl~~pG~~DiTAhVdF~aL~~a~~~~--G~ 292 (387)
T 1zkd_A 217 EWRPDTE--ILKIASRVRDQGGAALIIDYGHLRSDVGDTFQAIASHSYADPLQHPGRADLTAHVDFDALGRAAESI--GA 292 (387)
T ss_dssp EECCSHH--HHHHHHHHHHHCEEEEEEEEEESSCCBCCCCEEECSSSEECTTSSTTSSEEECCEEHHHHHHHHHHT--TC
T ss_pred EeCHHHH--HHHHHHHHhhCCceEEEEeCCCCCCCCCCchhhhhCcccCCcccccCccccCCccCHHHHHHHHHHc--CC
Confidence 9999888 9999999998889999999999864 58999999999999999999999999999999999999987 69
Q ss_pred eeeccccHHHHHHhCChHHHHHHHHhcCCHHHHHHHHHHHhHhhcCCCCCCCCCCCCCCCCCCcccccEEEEecCCCCCC
Q 011546 400 SVHGPMTQSQFLGSLGINFRVESLLQNCTEEQAESLRTGYWSLVGEGEAPFWEGPDEQAPIGMGTRYLAMAIVNKNQGVP 479 (483)
Q Consensus 400 ~~~g~~tQ~~FL~~lGI~~rl~~L~~~~~~~~~~~~~~~~~rLi~~~~~~~~~~~~~~~P~~MGe~FKVl~i~~k~~~~~ 479 (483)
.+.|+++|++||++|||.+|++.|.++++++++.+++++++||++.| |++||++||||++++++.+.|
T Consensus 293 ~~~g~~~Q~~FL~~lGi~~rl~~l~~~~~~~~~~~~~~a~~rL~~~~------------p~~MG~~FKvl~~~~~~~~~~ 360 (387)
T 1zkd_A 293 RAHGPVTQGAFLKRLGIETRALSLMAKATPQVSEDIAGALQRLTGEG------------RGAMGSMFKVIGVSDPKIETL 360 (387)
T ss_dssp EEEEEEEHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHHHHHHCEE------------TTEETTTEEEEEEECTTCCCC
T ss_pred cEeceecHHHHHHHCCHHHHHHHHHccCCHHHHHHHHHHHHHHhccC------------hhhhhhhceEEEEccCCCCCC
Confidence 99999999999999999999999988767777889999999999855 899999999999988788788
Q ss_pred CCCC
Q 011546 480 VPFE 483 (483)
Q Consensus 480 ~gF~ 483 (483)
+||.
T Consensus 361 ~gf~ 364 (387)
T 1zkd_A 361 VALS 364 (387)
T ss_dssp TTTT
T ss_pred CCcC
Confidence 8994
No 2
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=100.00 E-value=5.5e-96 Score=768.37 Aligned_cols=354 Identities=26% Similarity=0.407 Sum_probs=300.3
Q ss_pred hHHHHHHHHHHHhhcCCcccHHHHHHHhhcCCCCcccCCC-CCCC----CCCCccCCCChhHHHHHHHHHHHHHHHHHcC
Q 011546 83 ESELVKHLKGIIKFRGGPISVAEYMEEVLTNPKAGFYINR-DVFG----AEGDFITSPEVSQMFGEMVGVWAMCLWEQMG 157 (483)
Q Consensus 83 ~~~L~~~i~~~I~~~~GpIsf~~FM~~aLY~P~~GYY~~~-~~~G----~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g 157 (483)
++.|.++|++.|++.+|||||++||++|||||++|||+++ .+|| ++|||||||||||+|||+||+|++++|+++|
T Consensus 58 s~~L~~~i~~~I~~~~GpI~fa~yM~~aLy~P~~GYY~~~~~~~G~~~~~~GDFiTAPeiS~~FGe~la~~~~~~~~~~g 137 (432)
T 4f3n_A 58 SEALAASLRAEIASAGGWIPFSRYMERVLYAPGMGYYSGGAQKFGRRADDGSDFVTAPELSPLFAQTLARPVAQALDASG 137 (432)
T ss_dssp HHHHHHHHHHHHHHTTSCEEHHHHHHHHHHSTTTSSSCC-------------CCSSCGGGHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCeeHHHHHHHHhcCCCCCcccCCCCCCCCCCCCCCCccCchhhhHHHHHHHHHHHHHHHHhcC
Confidence 5789999999998766999999999999999999999986 6899 9999999999999999999999999999998
Q ss_pred CCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcccccccCcCCcccceeeccCCCCcee
Q 011546 158 QPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLAGTPVS 237 (483)
Q Consensus 158 ~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~~~~~~~~~~~~~~~~~~~~~~~v~ 237 (483)
+++|||+|||+|+||.|||++++.+... ..+|+|||+||.||++|+++|+...+.+ +.+|.
T Consensus 138 ---~~~ivE~GaG~GtLa~DiL~~l~~~~~~--~~~y~iVE~Sp~Lr~~Q~~~L~~~~~~~--------------~~~v~ 198 (432)
T 4f3n_A 138 ---TRRVMEFGAGTGKLAAGLLTALAALGVE--LDEYAIVDLSGELRARQRETLGAQAPGL--------------AARVR 198 (432)
T ss_dssp ---CCEEEEESCTTSHHHHHHHHHHHHTTCC--CSEEEEECTTSSSHHHHHHHHHHHSTTT--------------GGGEE
T ss_pred ---CCeEEEeCCCccHHHHHHHHHHHhcCCC--CceEEEEEcCHHHHHHHHHHHhcccccc--------------CCCce
Confidence 4799999999999999999999875422 3389999999999999999997532221 23799
Q ss_pred eccccccCCCCCCEEEEEecccccccceEEEEcCCeeEEEEEEEcCCCceEEEeCCCCChhhHHHHHHhhhhhcccCCCC
Q 011546 238 WHAALEQVPSGFPTIIVAHEFYDALPVHQFQKTTRGWCEKLVDIAEDSSFRFVLSPQPTPATLFLLQRCKWAADKELEKL 317 (483)
Q Consensus 238 W~~sl~~lp~~~~~iiiANEffDALPv~~f~~~~~~w~E~~V~~~~~~~f~~v~~p~~~~~~~~l~~~~~~~~~~~~~~g 317 (483)
|+++ +|++++|||||||||||||||+|++++++|+|++|+++++++|.|...|.+++. +...+.. .+.++|
T Consensus 199 W~~~---lP~~~~g~iiANE~fDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~p~~~~~---l~~~~~~---~~~~~G 269 (432)
T 4f3n_A 199 WLDA---LPERFEGVVVGNEVLDAMPVRLVAKQARGWCERGVSIDDAGAFVFADRPFARAE---EAARLAG---IDADEG 269 (432)
T ss_dssp EESS---CCSCEEEEEEEESCGGGSCCEEEEEETTEEEEEEEEECTTSCEEEEEECCSSTH---HHHTTTT---SCCCTT
T ss_pred eccc---CCccCceEEEeehhhccCceeEEEEeCCcEEEEEEEEcCCCcEEeccCCCCcHH---HHHHhhh---cCCCCC
Confidence 9864 677678999999999999999999999999999999988888988877754442 2221111 235689
Q ss_pred cEEEEchhHHHHHHHHHHHhccCCeEEEEEeCCCCC-------CcCCccceecccc-ccCCCCCCCccccccccCHHHHH
Q 011546 318 EHIEVCAKAMELTGAMAKRIGSDGGGALIIDYGLNG-------VVTDSLQAIRKHK-FVDLFDNPGSADLSAYVDFASIS 389 (483)
Q Consensus 318 ~~~Ei~~~a~~~l~~la~~l~~~~G~~LiIDYG~~~-------~~~gTLr~yr~H~-~~dpl~~PG~~DITAhVdF~~L~ 389 (483)
+++|||+++..|+++|+++|.+ |++|+||||+.. +..||||||++|+ ++|||.+||++||||||||++|+
T Consensus 270 ~~~Ei~~~a~~~~~~la~~l~~--G~~L~IDYG~~~~eyy~p~r~~GTL~~y~~h~~~~dpl~~pG~~DLTAhVdF~aL~ 347 (432)
T 4f3n_A 270 YVTETHDAAVAFVRTVCAMLAR--GAAFFIDYGFPSHEYYHRQRAQGTLMCHYRHRAHGDPFVYPGLQDITAHVEFSAIH 347 (432)
T ss_dssp CEEEECHHHHHHHHHHHHHEEE--EEEEEEEEEECHHHHTCTTCTTCSCEEESSSCEESCTTSSTTSSEEECCEEHHHHH
T ss_pred cEEEECHhHHHHHHHHHhHhcC--CEEEEEeCCCcchhcccCCCCCCChHHHHcCCCCCCcccCCCcccccccccHHHHH
Confidence 9999999999999999999985 999999999864 4678999987766 56999999999999999999999
Q ss_pred HHHHHhcCceeeeccccHHHHHHhCChHHHHHHHHhcCCHHHHHHHHHHHhHhhcCCCCCCCCCCCCCCCCCCcccccEE
Q 011546 390 HSAEEASERVSVHGPMTQSQFLGSLGINFRVESLLQNCTEEQAESLRTGYWSLVGEGEAPFWEGPDEQAPIGMGTRYLAM 469 (483)
Q Consensus 390 ~~a~~~g~g~~~~g~~tQ~~FL~~lGI~~rl~~L~~~~~~~~~~~~~~~~~rLi~~~~~~~~~~~~~~~P~~MGe~FKVl 469 (483)
++++++ |+.++|+++|++||++|||.+|+++|.. .+++++.+++++++||++ |++||++||||
T Consensus 348 ~aa~~~--G~~~~g~~~Q~~FL~~lGI~~rl~~l~~-~~~~~~~~~~~a~~rLi~--------------p~~MGe~FKvl 410 (432)
T 4f3n_A 348 EAGVGA--GADLLGYTSQARFLLNAGITDVLAEIDP-SDAQHFLPAANAVQKLIS--------------EAEMGELFKVI 410 (432)
T ss_dssp HHHHHT--TCEEEEEEEHHHHHHHTTHHHHHTTSCT-TCHHHHHHHHHHHHHHHC--------------TTTTTTTEEEE
T ss_pred HHHHHC--CceEeccccHHHHHHHCCHHHHHHHHhc-CCHHHHHHHHHHHHHhcC--------------hhhhhHHeeEE
Confidence 999987 6999999999999999999999998854 366778889999999999 99999999999
Q ss_pred EEecCCCCCCCCCC
Q 011546 470 AIVNKNQGVPVPFE 483 (483)
Q Consensus 470 ~i~~k~~~~~~gF~ 483 (483)
+++.....+|+||.
T Consensus 411 ~~~k~~~~~~~Gf~ 424 (432)
T 4f3n_A 411 AFSRGIDGALDAFA 424 (432)
T ss_dssp EEEESCCSCCGGGS
T ss_pred EECCCCCCCCCccc
Confidence 99644333567883
No 3
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.41 E-value=0.00073 Score=65.87 Aligned_cols=83 Identities=19% Similarity=0.302 Sum_probs=52.1
Q ss_pred CCCCCCccCCCChhHHHHHHHHHH----------HHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceE
Q 011546 125 FGAEGDFITSPEVSQMFGEMVGVW----------AMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHI 194 (483)
Q Consensus 125 ~G~~GDFiTSpeIs~~FGe~Ia~~----------i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y 194 (483)
+++-+||.=--++..+|-.+|-+- +..+.+..-.| .-+|+|+|||+|.++..+++.+. ...+++
T Consensus 26 ~~~~~~f~F~~~va~~fdd~i~rsvP~Y~~~~~~i~~l~~~~~~~-~~~vLDlGcGtG~~~~~la~~~~-----~~~~~v 99 (261)
T 4gek_A 26 IARLGDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQP-GTQVYDLGCSLGAATLSVRRNIH-----HDNCKI 99 (261)
T ss_dssp ------CCCCHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHCCT-TCEEEEETCTTTHHHHHHHHTCC-----SSSCEE
T ss_pred cccCCCceeCcchhhhhhhhHhhcCCCHHHHHHHHHHHHHHhCCC-CCEEEEEeCCCCHHHHHHHHhcC-----CCCCEE
Confidence 455667755556677777666541 22233333334 35999999999999888765432 123589
Q ss_pred EEEecChhhHHHHHHhccc
Q 011546 195 HLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 195 ~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
+-||+||.+-+.-++++..
T Consensus 100 ~gvD~s~~ml~~A~~~~~~ 118 (261)
T 4gek_A 100 IAIDNSPAMIERCRRHIDA 118 (261)
T ss_dssp EEEESCHHHHHHHHHHHHT
T ss_pred EEEECCHHHHHHHHHHHHh
Confidence 9999999998888877754
No 4
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=96.09 E-value=0.026 Score=55.57 Aligned_cols=67 Identities=22% Similarity=0.350 Sum_probs=48.2
Q ss_pred CCCCCCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChh
Q 011546 123 DVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT 202 (483)
Q Consensus 123 ~~~G~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (483)
..+|. .|.+.+.+-. .|++ ..+.... +|+|+|||+|.|..-+++.. .+++-||+|+.
T Consensus 23 k~~GQ--nfL~d~~i~~--------~Iv~---~~~~~~~-~VLEIG~G~G~lt~~L~~~~---------~~V~avEid~~ 79 (271)
T 3fut_A 23 KRFGQ--NFLVSEAHLR--------RIVE---AARPFTG-PVFEVGPGLGALTRALLEAG---------AEVTAIEKDLR 79 (271)
T ss_dssp TTSSC--CEECCHHHHH--------HHHH---HHCCCCS-CEEEECCTTSHHHHHHHHTT---------CCEEEEESCGG
T ss_pred ccCCc--cccCCHHHHH--------HHHH---hcCCCCC-eEEEEeCchHHHHHHHHHcC---------CEEEEEECCHH
Confidence 34663 6888876532 2222 2344445 99999999999999887631 26899999999
Q ss_pred hHHHHHHhcc
Q 011546 203 LQKLQHHNLK 212 (483)
Q Consensus 203 Lr~~Q~~~L~ 212 (483)
+.+.-++++.
T Consensus 80 ~~~~l~~~~~ 89 (271)
T 3fut_A 80 LRPVLEETLS 89 (271)
T ss_dssp GHHHHHHHTT
T ss_pred HHHHHHHhcC
Confidence 9988777764
No 5
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=95.99 E-value=0.039 Score=53.05 Aligned_cols=65 Identities=12% Similarity=0.198 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 138 SQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 138 s~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+--..+...+..++..+..+ +.+|+|+|||+|.++..+.+. ..+++.||+|+.+.+.-++++.
T Consensus 47 ~~~~~~~~~~~l~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~---------~~~v~gvD~s~~~~~~a~~~~~ 111 (285)
T 4htf_A 47 GQLRQAILWQDLDRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAER---------GHQVILCDLSAQMIDRAKQAAE 111 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSS-CCEEEEETCTTCHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHhcCCC-CCEEEEeCCcchHHHHHHHHC---------CCEEEEEECCHHHHHHHHHHHH
Confidence 3444455555566666666644 569999999999998887653 2379999999998887777664
No 6
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=95.93 E-value=0.052 Score=52.11 Aligned_cols=58 Identities=12% Similarity=0.131 Sum_probs=43.1
Q ss_pred HHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 147 VWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 147 ~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+..+.+.++.+...+|+|+|||.|.++..+++.. + .+++-||+|+.+.+.-++++.
T Consensus 51 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~-----~~v~gvd~s~~~~~~a~~~~~ 108 (287)
T 1kpg_A 51 AKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKY---D-----VNVVGLTLSKNQANHVQQLVA 108 (287)
T ss_dssp HHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH---C-----CEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHc---C-----CEEEEEECCHHHHHHHHHHHH
Confidence 333444555565555699999999999998887542 1 279999999999888777764
No 7
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=95.92 E-value=0.055 Score=50.59 Aligned_cols=59 Identities=14% Similarity=0.120 Sum_probs=43.9
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 146 GVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 146 a~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..|+..+++.+......+|+|+|||+|.++..+++.. ..+++.||+|+.+.+.-++++.
T Consensus 79 ~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--------~~~v~~vD~s~~~~~~a~~~~~ 137 (254)
T 1xtp_A 79 IEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKL--------YATTDLLEPVKHMLEEAKRELA 137 (254)
T ss_dssp HHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH--------CSEEEEEESCHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh--------cCEEEEEeCCHHHHHHHHHHhc
Confidence 3344555555554455799999999999998887643 1269999999999888777764
No 8
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=95.90 E-value=0.023 Score=56.61 Aligned_cols=67 Identities=16% Similarity=0.277 Sum_probs=46.2
Q ss_pred CCCCCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhh
Q 011546 124 VFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (483)
Q Consensus 124 ~~G~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (483)
.+|. .|.|.+.+- ..+++ ..+....-+|+|+|||+|.|+.-+++. ..+++-||+++.+
T Consensus 27 ~~GQ--nfL~d~~i~--------~~Iv~---~l~~~~~~~VLEIG~G~G~lT~~La~~---------~~~V~aVEid~~l 84 (295)
T 3gru_A 27 KLGQ--CFLIDKNFV--------NKAVE---SANLTKDDVVLEIGLGKGILTEELAKN---------AKKVYVIEIDKSL 84 (295)
T ss_dssp ---C--CEECCHHHH--------HHHHH---HTTCCTTCEEEEECCTTSHHHHHHHHH---------SSEEEEEESCGGG
T ss_pred ccCc--cccCCHHHH--------HHHHH---hcCCCCcCEEEEECCCchHHHHHHHhc---------CCEEEEEECCHHH
Confidence 3553 588886652 22232 234333458999999999999988764 1278999999999
Q ss_pred HHHHHHhcc
Q 011546 204 QKLQHHNLK 212 (483)
Q Consensus 204 r~~Q~~~L~ 212 (483)
.+.-++++.
T Consensus 85 i~~a~~~~~ 93 (295)
T 3gru_A 85 EPYANKLKE 93 (295)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 988887774
No 9
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=95.87 E-value=0.058 Score=51.22 Aligned_cols=56 Identities=9% Similarity=0.086 Sum_probs=41.6
Q ss_pred HHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 149 AMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 149 i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+..+.+.++.....+|+|+|||.|.++..+.+.. ..+++.||+|+.+.+.-++++.
T Consensus 50 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--------~~~v~gvD~s~~~~~~a~~~~~ 105 (273)
T 3bus_A 50 TDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR--------DVRVTGISISRPQVNQANARAT 105 (273)
T ss_dssp HHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--------CCEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--------CCEEEEEeCCHHHHHHHHHHHH
Confidence 3344455665555799999999999998876531 2489999999998877766654
No 10
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=95.81 E-value=0.073 Score=51.74 Aligned_cols=62 Identities=11% Similarity=0.108 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 143 e~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+.-...+..+.+.++.....+|+|+|||+|.++..+++.. + .+++-||+|+.+.+.-++++.
T Consensus 55 ~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~---~-----~~v~gvD~s~~~~~~a~~~~~ 116 (302)
T 3hem_A 55 EAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEY---D-----VNVIGLTLSENQYAHDKAMFD 116 (302)
T ss_dssp HHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH---C-----CEEEEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhC---C-----CEEEEEECCHHHHHHHHHHHH
Confidence 3344444555566665555699999999999998887643 1 379999999999887777764
No 11
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=95.78 E-value=0.039 Score=53.64 Aligned_cols=47 Identities=32% Similarity=0.461 Sum_probs=37.0
Q ss_pred CCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 157 g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+....-+|+|+|||+|.|+.-+++. ..+++-||+|+.+.+.-++++.
T Consensus 26 ~~~~~~~VLEIG~G~G~lt~~La~~---------~~~V~avEid~~~~~~~~~~~~ 72 (255)
T 3tqs_A 26 HPQKTDTLVEIGPGRGALTDYLLTE---------CDNLALVEIDRDLVAFLQKKYN 72 (255)
T ss_dssp CCCTTCEEEEECCTTTTTHHHHTTT---------SSEEEEEECCHHHHHHHHHHHT
T ss_pred CCCCcCEEEEEcccccHHHHHHHHh---------CCEEEEEECCHHHHHHHHHHHh
Confidence 4333458999999999999888642 1378999999999988877775
No 12
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=95.78 E-value=0.015 Score=56.51 Aligned_cols=74 Identities=14% Similarity=0.232 Sum_probs=50.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCC-CCCcEEEEEcCCcchhHHHHHHHHh-cCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 137 VSQMFGEMVGVWAMCLWEQMGQ-PNRVNLVELGPGRGTLMADLLRGAS-KFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 137 Is~~FGe~Ia~~i~~~w~~~g~-p~~~~IvEiGaG~GtLa~DIL~~l~-~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.++..-+.+...+..+....+. ....+|+|+|||+|.++..+|..+. ..|.. .+.++.||+|+.+.+.-++++.
T Consensus 28 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~--~v~~~~vD~S~~ml~~a~~~~~ 103 (292)
T 2aot_A 28 EHQCMQEFMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGV--CINNEVVEPSAEQIAKYKELVA 103 (292)
T ss_dssp HHHHHHHHHHHTHHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTC--EEEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhchhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCc--eeeEEEEeCCHHHHHHHHHHHH
Confidence 3445445454444444444442 2346999999999999998988774 34432 2356999999999888777764
No 13
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=95.77 E-value=0.087 Score=50.79 Aligned_cols=48 Identities=19% Similarity=0.225 Sum_probs=37.6
Q ss_pred CCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 157 g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+.+...+|+|+|||.|.++..+++.. ..+++.||+|+.+.+.-++++.
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~--------~~~v~gvD~s~~~~~~a~~~~~ 126 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKF--------GVSIDCLNIAPVQNKRNEEYNN 126 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH--------CCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHh--------CCEEEEEeCCHHHHHHHHHHHH
Confidence 44445699999999999999887653 1279999999998877776654
No 14
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=95.76 E-value=0.026 Score=52.05 Aligned_cols=53 Identities=13% Similarity=0.051 Sum_probs=39.4
Q ss_pred HHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 150 MCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 150 ~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
.+++..++.+...+|+|+|||+|.++..+.+. ..+++-||+|+.+-+.-+++.
T Consensus 12 ~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~---------g~~V~gvD~S~~~l~~a~~~~ 64 (203)
T 1pjz_A 12 QQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQ---------GYHVVGAELSEAAVERYFTER 64 (203)
T ss_dssp HHHHHHHCCCTTCEEEETTTCCSHHHHHHHHH---------CCEEEEEEECHHHHHHHHHHH
T ss_pred HHHHHhcccCCCCEEEEeCCCCcHhHHHHHHC---------CCeEEEEeCCHHHHHHHHHHc
Confidence 33445556555579999999999998877552 127899999999987766654
No 15
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=95.71 E-value=0.022 Score=57.40 Aligned_cols=67 Identities=13% Similarity=0.192 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 139 ~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-.|-++++.+.+.++.....|++.+|++||+|.|.++.-+++. +|. .+++.||++|.+-+.-++.+.
T Consensus 68 ~~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la~~---~p~----~~v~~VEidp~vi~~Ar~~~~ 134 (317)
T 3gjy_A 68 FEYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFADV---YPQ----SRNTVVELDAELARLSREWFD 134 (317)
T ss_dssp SHHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHHHH---STT----CEEEEEESCHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHHHH---CCC----cEEEEEECCHHHHHHHHHhcc
Confidence 4677888887765443344455679999999999999888764 332 378999999999998888774
No 16
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=95.69 E-value=0.038 Score=55.32 Aligned_cols=77 Identities=10% Similarity=0.122 Sum_probs=53.7
Q ss_pred CCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHH
Q 011546 127 AEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL 206 (483)
Q Consensus 127 ~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~ 206 (483)
..|.|||+.+|..+..+++.. +. ......+|+|+|||+|.++..+++.+..... ...+++-+|+||...+.
T Consensus 104 ~~g~~~TP~~i~~~~~~ll~~-----l~--~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~--~~~~v~GiDi~~~~~~~ 174 (344)
T 2f8l_A 104 QVNHQMTPDSIGFIVAYLLEK-----VI--QKKKNVSILDPACGTANLLTTVINQLELKGD--VDVHASGVDVDDLLISL 174 (344)
T ss_dssp CGGGCCCCHHHHHHHHHHHHH-----HH--TTCSEEEEEETTCTTSHHHHHHHHHHHTTSS--CEEEEEEEESCHHHHHH
T ss_pred ccCcCCChHHHHHHHHHHHHH-----hc--CCCCCCEEEeCCCCccHHHHHHHHHHHHhcC--CCceEEEEECCHHHHHH
Confidence 358899999777665554431 11 1113469999999999999999887753200 12578999999999887
Q ss_pred HHHhcc
Q 011546 207 QHHNLK 212 (483)
Q Consensus 207 Q~~~L~ 212 (483)
-+..+.
T Consensus 175 a~~n~~ 180 (344)
T 2f8l_A 175 ALVGAD 180 (344)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766653
No 17
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=95.63 E-value=0.084 Score=51.59 Aligned_cols=58 Identities=14% Similarity=0.130 Sum_probs=43.1
Q ss_pred HHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 147 VWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 147 ~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+..+.+.++.+...+|+|+|||+|.++..+++.. ..+++.||+|+.+.+.-++++.
T Consensus 77 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--------~~~v~gvD~s~~~~~~a~~~~~ 134 (318)
T 2fk8_A 77 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--------DVNVIGLTLSKNQHARCEQVLA 134 (318)
T ss_dssp HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--------CCEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC--------CCEEEEEECCHHHHHHHHHHHH
Confidence 333444455665555699999999999998887643 1279999999999888777764
No 18
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=95.62 E-value=0.052 Score=50.52 Aligned_cols=53 Identities=11% Similarity=0.057 Sum_probs=38.8
Q ss_pred HHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 151 CLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 151 ~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
.++.....+. .+|+|+|||+|.++..+.+ ...+++.||+|+.+.+.-++++..
T Consensus 58 ~~~~~~~~~~-~~vLDiGcG~G~~~~~l~~---------~~~~v~gvD~s~~~~~~a~~~~~~ 110 (235)
T 3lcc_A 58 HLVDTSSLPL-GRALVPGCGGGHDVVAMAS---------PERFVVGLDISESALAKANETYGS 110 (235)
T ss_dssp HHHHTTCSCC-EEEEEETCTTCHHHHHHCB---------TTEEEEEECSCHHHHHHHHHHHTT
T ss_pred HHHHhcCCCC-CCEEEeCCCCCHHHHHHHh---------CCCeEEEEECCHHHHHHHHHHhhc
Confidence 3444455554 4999999999998876632 124799999999998887777653
No 19
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=95.55 E-value=0.036 Score=50.77 Aligned_cols=43 Identities=26% Similarity=0.347 Sum_probs=35.0
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-++++.
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~~~ 88 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLA---------GRTVYGIEPSREMRMIAKEKLP 88 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHT---------TCEEEEECSCHHHHHHHHHHSC
T ss_pred CCeEEEeCCCCCHHHHHHHhC---------CCeEEEEeCCHHHHHHHHHhCC
Confidence 359999999999998887652 2379999999999888777664
No 20
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=95.53 E-value=0.056 Score=49.95 Aligned_cols=53 Identities=17% Similarity=0.196 Sum_probs=38.8
Q ss_pred HHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 149 AMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 149 i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
+.+.+.... +...+|+|+|||+|.++..+++.. + +++.||+|+.+.+.-++++
T Consensus 30 ~~~~l~~~~-~~~~~vLdiG~G~G~~~~~l~~~~---~------~v~~~D~s~~~~~~a~~~~ 82 (239)
T 3bxo_A 30 IADLVRSRT-PEASSLLDVACGTGTHLEHFTKEF---G------DTAGLELSEDMLTHARKRL 82 (239)
T ss_dssp HHHHHHHHC-TTCCEEEEETCTTSHHHHHHHHHH---S------EEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHHhc-CCCCeEEEecccCCHHHHHHHHhC---C------cEEEEeCCHHHHHHHHHhC
Confidence 344444433 334699999999999998876642 1 6899999999988776654
No 21
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=95.48 E-value=0.057 Score=48.88 Aligned_cols=50 Identities=18% Similarity=0.401 Sum_probs=38.1
Q ss_pred HcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 155 QMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 155 ~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
.++.+.. +|+|+|||+|.++..+++. + ..+++.||+|+.+.+.-++++..
T Consensus 39 ~~~~~~~-~vLdiG~G~G~~~~~l~~~----~----~~~v~~~D~s~~~~~~a~~~~~~ 88 (219)
T 3dlc_A 39 RFGITAG-TCIDIGSGPGALSIALAKQ----S----DFSIRALDFSKHMNEIALKNIAD 88 (219)
T ss_dssp HHCCCEE-EEEEETCTTSHHHHHHHHH----S----EEEEEEEESCHHHHHHHHHHHHH
T ss_pred hcCCCCC-EEEEECCCCCHHHHHHHHc----C----CCeEEEEECCHHHHHHHHHHHHh
Confidence 3454433 9999999999998888763 1 24799999999998887777643
No 22
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=95.47 E-value=0.093 Score=48.11 Aligned_cols=57 Identities=23% Similarity=0.278 Sum_probs=40.4
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 146 GVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 146 a~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..++.+.+... ...+|+|+|||+|.++..+.+. .+ ..+++-||+|+.+.+.-++++.
T Consensus 18 ~~~l~~~l~~~---~~~~vLDiGcG~G~~~~~l~~~---~~----~~~v~gvD~s~~~~~~a~~~~~ 74 (219)
T 3jwg_A 18 LGTVVAVLKSV---NAKKVIDLGCGEGNLLSLLLKD---KS----FEQITGVDVSYSVLERAKDRLK 74 (219)
T ss_dssp HHHHHHHHHHT---TCCEEEEETCTTCHHHHHHHTS---TT----CCEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHHHhhc---CCCEEEEecCCCCHHHHHHHhc---CC----CCEEEEEECCHHHHHHHHHHHH
Confidence 34444444432 2359999999999988777542 22 2489999999999988888764
No 23
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=95.43 E-value=0.1 Score=47.40 Aligned_cols=68 Identities=19% Similarity=0.158 Sum_probs=44.8
Q ss_pred CCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHH
Q 011546 129 GDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQH 208 (483)
Q Consensus 129 GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~ 208 (483)
|.|.|++++....-+ .....+....-+|+|+|||+|.++..+.+. + ..+++-||+|+.+.+.-+
T Consensus 26 ~~~~~~~~~~~~l~~--------~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~----~----~~~v~~vD~~~~~~~~a~ 89 (207)
T 1wy7_A 26 EQYRTPGNAASELLW--------LAYSLGDIEGKVVADLGAGTGVLSYGALLL----G----AKEVICVEVDKEAVDVLI 89 (207)
T ss_dssp TCCCCCHHHHHHHHH--------HHHHTTSSTTCEEEEETCTTCHHHHHHHHT----T----CSEEEEEESCHHHHHHHH
T ss_pred eeecCchHHHHHHHH--------HHHHcCCCCcCEEEEeeCCCCHHHHHHHHc----C----CCEEEEEECCHHHHHHHH
Confidence 348887766443222 222223223459999999999988776542 1 126899999999988777
Q ss_pred Hhcc
Q 011546 209 HNLK 212 (483)
Q Consensus 209 ~~L~ 212 (483)
+++.
T Consensus 90 ~~~~ 93 (207)
T 1wy7_A 90 ENLG 93 (207)
T ss_dssp HHTG
T ss_pred HHHH
Confidence 7664
No 24
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=95.39 E-value=0.082 Score=51.68 Aligned_cols=53 Identities=9% Similarity=-0.002 Sum_probs=40.0
Q ss_pred HHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 152 LWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 152 ~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
+...++.+...+|+|+|||+|.++.-+.+. ..+++-||+|+.+.+.-++++..
T Consensus 37 il~~l~l~~g~~VLDlGcGtG~~a~~La~~---------g~~V~gvD~S~~ml~~Ar~~~~~ 89 (261)
T 3iv6_A 37 DIFLENIVPGSTVAVIGASTRFLIEKALER---------GASVTVFDFSQRMCDDLAEALAD 89 (261)
T ss_dssp HHHTTTCCTTCEEEEECTTCHHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHTSS
T ss_pred HHHhcCCCCcCEEEEEeCcchHHHHHHHhc---------CCEEEEEECCHHHHHHHHHHHHh
Confidence 344455555569999999999998877642 12789999999998887777653
No 25
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=95.31 E-value=0.023 Score=51.32 Aligned_cols=61 Identities=16% Similarity=0.323 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 143 e~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+.+..++++.+... +...+|+|+|||+|.++..+++.. ...+++.||+|+.+.+.-++++.
T Consensus 15 ~~~~~~~~~~l~~~--~~~~~vLDiG~G~G~~~~~l~~~~-------~~~~v~~vD~~~~~~~~a~~~~~ 75 (215)
T 4dzr_A 15 EVLVEEAIRFLKRM--PSGTRVIDVGTGSGCIAVSIALAC-------PGVSVTAVDLSMDALAVARRNAE 75 (215)
T ss_dssp HHHHHHHHHHHTTC--CTTEEEEEEESSBCHHHHHHHHHC-------TTEEEEEEECC------------
T ss_pred HHHHHHHHHHhhhc--CCCCEEEEecCCHhHHHHHHHHhC-------CCCeEEEEECCHHHHHHHHHHHH
Confidence 45555665555321 334699999999999998887642 23489999999998776666554
No 26
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=95.29 E-value=0.16 Score=46.62 Aligned_cols=44 Identities=25% Similarity=0.322 Sum_probs=35.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+|+|+|||+|.++..+.+. .+ ..+++-||+|+.+.+.-++++.
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~---~~----~~~v~gvD~s~~~~~~a~~~~~ 74 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKD---SF----FEQITGVDVSYRSLEIAQERLD 74 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHC---TT----CSEEEEEESCHHHHHHHHHHHT
T ss_pred CEEEEeCCCCCHHHHHHHhh---CC----CCEEEEEECCHHHHHHHHHHHH
Confidence 49999999999988877542 12 2489999999999888887764
No 27
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=95.16 E-value=0.028 Score=60.64 Aligned_cols=74 Identities=19% Similarity=0.260 Sum_probs=55.0
Q ss_pred CCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcC-cCc-------cccceEEEEe
Q 011546 127 AEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKF-KNF-------TESLHIHLVE 198 (483)
Q Consensus 127 ~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~-p~~-------~~~l~y~iVE 198 (483)
+.|-|||+++|..+..+++ .|.+.+|++.+||+|.|...+++.++.. +.. ....+++-+|
T Consensus 223 ~~G~fyTP~~Vv~lmv~ll------------~p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~E 290 (544)
T 3khk_A 223 QGGQYYTPKSIVTLIVEML------------EPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQE 290 (544)
T ss_dssp CSTTTCCCHHHHHHHHHHH------------CCCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECC
T ss_pred cCCeEeCCHHHHHHHHHHH------------hcCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEe
Confidence 4689999999987766654 2344599999999999999888877531 111 1145789999
Q ss_pred cChhhHHHHHHhcc
Q 011546 199 CSPTLQKLQHHNLK 212 (483)
Q Consensus 199 ~Sp~Lr~~Q~~~L~ 212 (483)
++|....+-+.+|.
T Consensus 291 id~~~~~lA~~Nl~ 304 (544)
T 3khk_A 291 SNPTTWKLAAMNMV 304 (544)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 99999888776653
No 28
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=95.16 E-value=0.038 Score=53.48 Aligned_cols=48 Identities=21% Similarity=0.230 Sum_probs=37.0
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 159 p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+.+.+|+|+|||+|.++..+++. +| ...+++-||+||.+.+.-++++.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~---~~---~~~~v~gvD~s~~~~~~a~~~~~ 68 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPL---LP---EGSKYTGIDSGETLLAEARELFR 68 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTT---SC---TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCeEEEecCCCCHHHHHHHHh---CC---CCCEEEEEECCHHHHHHHHHHHH
Confidence 34569999999999998887542 22 23589999999998887777664
No 29
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=95.15 E-value=0.13 Score=46.77 Aligned_cols=56 Identities=18% Similarity=0.118 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccc-eEEEEecChhhHHHHHHhc
Q 011546 143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESL-HIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 143 e~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l-~y~iVE~Sp~Lr~~Q~~~L 211 (483)
..+.....+.+..... ...+|+|+|||+|.++..+ .. +++.||+|+.+.+.-++++
T Consensus 20 ~~~~~~~~~~l~~~~~-~~~~vLdiG~G~G~~~~~l------------~~~~v~~vD~s~~~~~~a~~~~ 76 (211)
T 2gs9_A 20 AYVIAEEERALKGLLP-PGESLLEVGAGTGYWLRRL------------PYPQKVGVEPSEAMLAVGRRRA 76 (211)
T ss_dssp HHHHHHHHHHHHTTCC-CCSEEEEETCTTCHHHHHC------------CCSEEEEECCCHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHhcC-CCCeEEEECCCCCHhHHhC------------CCCeEEEEeCCHHHHHHHHHhC
Confidence 3333444455555443 3469999999999977654 12 7899999999877766655
No 30
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=95.15 E-value=0.097 Score=49.04 Aligned_cols=52 Identities=17% Similarity=0.103 Sum_probs=38.9
Q ss_pred HHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHh
Q 011546 152 LWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN 210 (483)
Q Consensus 152 ~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~ 210 (483)
+.+.++.....+|+|+|||+|.++..+++.+ | ..+++.||+|+.+.+.-+++
T Consensus 25 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~----~~~v~~~D~s~~~~~~a~~~ 76 (259)
T 2p35_A 25 LLAQVPLERVLNGYDLGCGPGNSTELLTDRY---G----VNVITGIDSDDDMLEKAADR 76 (259)
T ss_dssp HHTTCCCSCCSSEEEETCTTTHHHHHHHHHH---C----TTSEEEEESCHHHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEecCcCCHHHHHHHHhC---C----CCEEEEEECCHHHHHHHHHh
Confidence 3344454445699999999999998887653 2 23799999999988776665
No 31
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=95.12 E-value=0.11 Score=52.51 Aligned_cols=72 Identities=26% Similarity=0.417 Sum_probs=49.2
Q ss_pred CCCChhHHHHHHHHHH----HHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHH
Q 011546 133 TSPEVSQMFGEMVGVW----AMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQH 208 (483)
Q Consensus 133 TSpeIs~~FGe~Ia~~----i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~ 208 (483)
..|+....|...++.+ +..+.+..+.+...+|+|+|||+|.++..+++. +| .++++.+|+ |...+.-+
T Consensus 171 ~~~~~~~~f~~~m~~~~~~~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~---~p----~~~~~~~D~-~~~~~~a~ 242 (369)
T 3gwz_A 171 EDPKARELFNRAMGSVSLTEAGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDA---FP----GLRGTLLER-PPVAEEAR 242 (369)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHH---CT----TCEEEEEEC-HHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHhhhHHHHHHhCCCccCcEEEEeCCCccHHHHHHHHH---CC----CCeEEEEcC-HHHHHHHH
Confidence 3466667776665543 223334455555679999999999999888764 33 347899999 87766666
Q ss_pred Hhcc
Q 011546 209 HNLK 212 (483)
Q Consensus 209 ~~L~ 212 (483)
+++.
T Consensus 243 ~~~~ 246 (369)
T 3gwz_A 243 ELLT 246 (369)
T ss_dssp HHHH
T ss_pred Hhhh
Confidence 5553
No 32
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=95.09 E-value=0.12 Score=46.73 Aligned_cols=48 Identities=15% Similarity=0.221 Sum_probs=35.5
Q ss_pred CCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 157 g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+....-+|+|+|||+|.++..+.+. + ..+++-||+|+.+.+.-++++.
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~----~----~~~v~~vD~~~~~~~~a~~~~~ 95 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL----G----AESVTAFDIDPDAIETAKRNCG 95 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT----T----BSEEEEEESCHHHHHHHHHHCT
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc----C----CCEEEEEECCHHHHHHHHHhcC
Confidence 3333459999999999988776542 1 2268999999999887776653
No 33
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=95.05 E-value=0.071 Score=50.37 Aligned_cols=44 Identities=7% Similarity=0.201 Sum_probs=34.5
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
...+|+|+|||+|.++..+.+. . . +++.||+|+.+.+.-++++.
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~---~----~--~v~gvD~s~~~l~~a~~~~~ 80 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPF---V----K--KVVAFDLTEDILKVARAFIE 80 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGG---S----S--EEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCHHHHHHHHh---C----C--EEEEEeCCHHHHHHHHHHHH
Confidence 3469999999999988876532 1 1 79999999999887777664
No 34
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=95.03 E-value=0.12 Score=47.80 Aligned_cols=45 Identities=13% Similarity=0.045 Sum_probs=34.5
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
...+|+|+|||+|.++..+++. + ..+++.||+|+.+.+.-++++.
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~----~----~~~v~~vD~s~~~~~~a~~~~~ 87 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEH----G----ASYVLGLDLSEKMLARARAAGP 87 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT----T----CSEEEEEESCHHHHHHHHHTSC
T ss_pred CCCEEEEEcCcCCHHHHHHHHC----C----CCeEEEEcCCHHHHHHHHHhcc
Confidence 3469999999999988776542 1 1179999999998887776653
No 35
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=95.03 E-value=0.037 Score=48.67 Aligned_cols=44 Identities=18% Similarity=0.196 Sum_probs=34.2
Q ss_pred CCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHh
Q 011546 158 QPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN 210 (483)
Q Consensus 158 ~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~ 210 (483)
.+...+|+|+|||+|.++..+.+.. . +++.||+|+.+.+.-+++
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~--------~-~v~~vD~s~~~~~~a~~~ 58 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFA--------T-KLYCIDINVIALKEVKEK 58 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTE--------E-EEEEECSCHHHHHHHHHH
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhc--------C-eEEEEeCCHHHHHHHHHh
Confidence 3344699999999999988775421 2 789999999987776665
No 36
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=95.00 E-value=0.029 Score=60.47 Aligned_cols=74 Identities=16% Similarity=0.226 Sum_probs=55.0
Q ss_pred CCCCccCCCChhHHHHHHHHHHHHHHHHHcCCC-CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHH
Q 011546 127 AEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQP-NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQK 205 (483)
Q Consensus 127 ~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p-~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~ 205 (483)
+.|.|||+++|+.+..+++.. ...| ...+|++.+||+|.|...+++.++.. ...+++-+|+++....
T Consensus 195 ~~G~fyTP~~Vv~lmv~ll~~--------~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~----~~~~i~G~Eid~~~~~ 262 (542)
T 3lkd_A 195 KAGEFYTPQPVAKLMTQIAFL--------GREDKQGFTLYDATMGSGSLLLNAKRYSRQP----QTVVYFGQELNTSTYN 262 (542)
T ss_dssp CCSSCCCCHHHHHHHHHHHHT--------TCTTCTTCEEEETTCTTSTTGGGHHHHCSCT----TTCEEEEEESCHHHHH
T ss_pred cCCeecccHHHHHHHHHHHhc--------ccCCCCCCEEeecccchhHHHHHHHHHHHhc----cCceEEEEECcHHHHH
Confidence 478999999998776655432 1112 23599999999999998888876532 2458999999999888
Q ss_pred HHHHhcc
Q 011546 206 LQHHNLK 212 (483)
Q Consensus 206 ~Q~~~L~ 212 (483)
+-+.+|.
T Consensus 263 lA~~Nl~ 269 (542)
T 3lkd_A 263 LARMNMI 269 (542)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8776653
No 37
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=94.99 E-value=0.1 Score=47.63 Aligned_cols=47 Identities=19% Similarity=0.233 Sum_probs=37.2
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
...+|+|+|||+|.++..+++... | ..+++.||+|+.+.+.-++++.
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~--~----~~~v~~vD~~~~~~~~a~~~~~ 123 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVG--E----DGLVVSIERIPELAEKAERTLR 123 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHC--T----TSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHHHHhC--C----CCEEEEEeCCHHHHHHHHHHHH
Confidence 345999999999999998877541 1 1379999999999888777664
No 38
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=94.96 E-value=0.1 Score=47.63 Aligned_cols=51 Identities=12% Similarity=0.296 Sum_probs=39.5
Q ss_pred cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
++.+...+|+|+|||+|.++..+++... ...+++.||+|+.+.+.-++++.
T Consensus 33 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~------~~~~v~~vD~s~~~~~~a~~~~~ 83 (219)
T 3dh0_A 33 FGLKEGMTVLDVGTGAGFYLPYLSKMVG------EKGKVYAIDVQEEMVNYAWEKVN 83 (219)
T ss_dssp HTCCTTCEEEESSCTTCTTHHHHHHHHT------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred hCCCCCCEEEEEecCCCHHHHHHHHHhC------CCcEEEEEECCHHHHHHHHHHHH
Confidence 3444456999999999999999877541 12379999999998888777764
No 39
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=94.96 E-value=0.12 Score=48.29 Aligned_cols=51 Identities=10% Similarity=0.236 Sum_probs=39.9
Q ss_pred HHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 154 EQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 154 ~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+.++.+...+|+|+|||+|.++..+++.. ..+++.||+|+.+.+.-++++.
T Consensus 49 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--------~~~v~~vD~s~~~~~~a~~~~~ 99 (266)
T 3ujc_A 49 SDIELNENSKVLDIGSGLGGGCMYINEKY--------GAHTHGIDICSNIVNMANERVS 99 (266)
T ss_dssp TTCCCCTTCEEEEETCTTSHHHHHHHHHH--------CCEEEEEESCHHHHHHHHHTCC
T ss_pred HhcCCCCCCEEEEECCCCCHHHHHHHHHc--------CCEEEEEeCCHHHHHHHHHHhh
Confidence 33455455699999999999999987753 2379999999998888777664
No 40
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=94.92 E-value=0.12 Score=47.24 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=35.5
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
...+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-++++..
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~~~~ 95 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPH---------CKRLTVIDVMPRAIGRACQRTKR 95 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGG---------EEEEEEEESCHHHHHHHHHHTTT
T ss_pred CCCcEEEEcCCCCHHHHHHHHc---------CCEEEEEECCHHHHHHHHHhccc
Confidence 4569999999999988776432 12799999999998887777653
No 41
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=94.89 E-value=0.041 Score=52.79 Aligned_cols=43 Identities=16% Similarity=0.270 Sum_probs=34.5
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
...+|+|+|||+|.++..+++ + ..+++-||+|+.+.+.-++++
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~-----~----~~~v~gvD~s~~~~~~a~~~~ 99 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ-----S----GAEVLGTDNAATMIEKARQNY 99 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH-----T----TCEEEEEESCHHHHHHHHHHC
T ss_pred CCCEEEEecCCCCHHHHHHHh-----C----CCeEEEEECCHHHHHHHHhhC
Confidence 345999999999999988865 1 237999999999888766654
No 42
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=94.86 E-value=0.14 Score=47.46 Aligned_cols=42 Identities=17% Similarity=0.157 Sum_probs=33.9
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
..+|+|+|||+|.++..+++. ..+++.||+|+.+.+..+++.
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~~ 95 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRT---------GYKAVGVDISEVMIQKGKERG 95 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHT---------TCEEEEEESCHHHHHHHHTTT
T ss_pred CCeEEEEcCCCCHHHHHHHHc---------CCeEEEEECCHHHHHHHHhhc
Confidence 359999999999998877653 237999999999888777654
No 43
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=94.83 E-value=0.24 Score=46.88 Aligned_cols=68 Identities=16% Similarity=0.169 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChh------hHHHHHHhcc
Q 011546 139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT------LQKLQHHNLK 212 (483)
Q Consensus 139 ~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~------Lr~~Q~~~L~ 212 (483)
.-+...-..+...+.+.++.+...+|+|+|||+|.++..+++... | ..+++-||+|+. +.+.-++++.
T Consensus 22 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g--~----~~~v~gvD~s~~~~~~~~~~~~a~~~~~ 95 (275)
T 3bkx_A 22 RTIQRRQTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVG--S----SGHVTGIDIASPDYGAPLTLGQAWNHLL 95 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHC--T----TCEEEEECSSCTTCCSSSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhC--C----CCEEEEEECCccccccHHHHHHHHHHHH
Confidence 344555556666666777765567999999999999998876531 1 237999999995 4444444543
No 44
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=94.76 E-value=0.19 Score=50.17 Aligned_cols=74 Identities=19% Similarity=0.298 Sum_probs=53.1
Q ss_pred ccCCCC---hhHHHHHHHHHHH-----HHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChh
Q 011546 131 FITSPE---VSQMFGEMVGVWA-----MCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT 202 (483)
Q Consensus 131 FiTSpe---Is~~FGe~Ia~~i-----~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (483)
+...|+ ....|.+.++.+. ..+.+..+.+...+|+|+|||+|.++..+++. +| .++++.+|+ |.
T Consensus 153 ~~~~p~~~~~~~~f~~~m~~~~~~~~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~---~p----~~~~~~~D~-~~ 224 (359)
T 1x19_A 153 QVPYPPVTREDNLYFEEIHRSNAKFAIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKH---FP----ELDSTILNL-PG 224 (359)
T ss_dssp SSCSSCCSHHHHHHHHHHHHTTCHHHHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHH---CT----TCEEEEEEC-GG
T ss_pred cccCchhhHHHHHHHHHHHHhccchhHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHH---CC----CCeEEEEec-HH
Confidence 456678 7778877665432 23445555555679999999999999888764 33 348999999 88
Q ss_pred hHHHHHHhcc
Q 011546 203 LQKLQHHNLK 212 (483)
Q Consensus 203 Lr~~Q~~~L~ 212 (483)
+.+.-++++.
T Consensus 225 ~~~~a~~~~~ 234 (359)
T 1x19_A 225 AIDLVNENAA 234 (359)
T ss_dssp GHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8777666664
No 45
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=94.75 E-value=0.056 Score=50.03 Aligned_cols=91 Identities=12% Similarity=0.097 Sum_probs=55.9
Q ss_pred hhcCCCCcccCCCCCCCCCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCcc
Q 011546 110 VLTNPKAGFYINRDVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFT 189 (483)
Q Consensus 110 aLY~P~~GYY~~~~~~G~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~ 189 (483)
..+-|...||.....+| .|..+++|.+. .++++.+.. .....-+|+|+|||+|.++..+.+.....+ .
T Consensus 40 ~~f~p~~~y~d~~~~~~-~~~~~~~p~~~--------~~~~~~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~--~ 107 (227)
T 2pbf_A 40 GKYIKEIPYIDTPVYIS-HGVTISAPHMH--------ALSLKRLIN-VLKPGSRAIDVGSGSGYLTVCMAIKMNVLE--N 107 (227)
T ss_dssp GGTCSSSTTSSSCEEEE-TTEEECCHHHH--------HHHHHHHTT-TSCTTCEEEEESCTTSHHHHHHHHHTTTTT--C
T ss_pred HHcCCcccCCCCccccC-CCCccCChHHH--------HHHHHHHHh-hCCCCCEEEEECCCCCHHHHHHHHHhcccC--C
Confidence 45667666665544454 34566666532 122333321 122235999999999999998876542110 0
Q ss_pred ccceEEEEecChhhHHHHHHhcc
Q 011546 190 ESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 190 ~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
...+++-||+|+.+.+.-++++.
T Consensus 108 ~~~~v~~vD~~~~~~~~a~~~~~ 130 (227)
T 2pbf_A 108 KNSYVIGLERVKDLVNFSLENIK 130 (227)
T ss_dssp TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCHHHHHHHHHHHH
Confidence 22489999999999888777764
No 46
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=94.75 E-value=0.092 Score=49.17 Aligned_cols=57 Identities=9% Similarity=0.180 Sum_probs=42.5
Q ss_pred HHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 147 VWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 147 ~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.++...+.....+...+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-++++.
T Consensus 28 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~---------~~~v~gvD~s~~~l~~a~~~~~ 84 (252)
T 1wzn_A 28 DFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER---------GYEVVGLDLHEEMLRVARRKAK 84 (252)
T ss_dssp HHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC---------CCeEEEEECCHHHHHHHHHHHH
Confidence 45556666665544569999999999998877642 1379999999999887776654
No 47
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=94.74 E-value=0.15 Score=46.34 Aligned_cols=66 Identities=26% Similarity=0.268 Sum_probs=46.5
Q ss_pred CCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHH
Q 011546 128 EGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ 207 (483)
Q Consensus 128 ~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q 207 (483)
.|.+++.|.+.... .+.++....-+|+|+|||+|.++..+.+. ..+++-||+|+.+.+.-
T Consensus 56 ~~~~~~~~~~~~~~-----------~~~l~~~~~~~vLdiG~G~G~~~~~la~~---------~~~v~~vD~~~~~~~~a 115 (210)
T 3lbf_A 56 QGQTISQPYMVARM-----------TELLELTPQSRVLEIGTGSGYQTAILAHL---------VQHVCSVERIKGLQWQA 115 (210)
T ss_dssp TSCEECCHHHHHHH-----------HHHTTCCTTCEEEEECCTTSHHHHHHHHH---------SSEEEEEESCHHHHHHH
T ss_pred CCCEeCCHHHHHHH-----------HHhcCCCCCCEEEEEcCCCCHHHHHHHHh---------CCEEEEEecCHHHHHHH
Confidence 46777777543332 12233334469999999999999887654 13799999999998887
Q ss_pred HHhccc
Q 011546 208 HHNLKC 213 (483)
Q Consensus 208 ~~~L~~ 213 (483)
++++..
T Consensus 116 ~~~~~~ 121 (210)
T 3lbf_A 116 RRRLKN 121 (210)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777753
No 48
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=94.71 E-value=0.17 Score=46.71 Aligned_cols=47 Identities=17% Similarity=0.163 Sum_probs=37.3
Q ss_pred CCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 157 g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+....-+|+|+|||+|.++..+.+.. .+++.||+|+.+.+.-++++.
T Consensus 67 ~~~~~~~vLdiG~G~G~~~~~l~~~~---------~~v~~vD~~~~~~~~a~~~~~ 113 (231)
T 1vbf_A 67 DLHKGQKVLEIGTGIGYYTALIAEIV---------DKVVSVEINEKMYNYASKLLS 113 (231)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHS---------SEEEEEESCHHHHHHHHHHHT
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHc---------CEEEEEeCCHHHHHHHHHHHh
Confidence 33334599999999999998876542 379999999999888887765
No 49
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=94.71 E-value=0.17 Score=45.85 Aligned_cols=40 Identities=18% Similarity=0.191 Sum_probs=32.0
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHH
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHH 209 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~ 209 (483)
.-+|+|+|||+|.++..+.+. ..+++.||+|+.+.+.-++
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~---------~~~v~~~D~s~~~~~~a~~ 86 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL---------ADRVTALDGSAEMIAEAGR 86 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH---------SSEEEEEESCHHHHHHHGG
T ss_pred CCeEEEECCCCCHHHHHHHhc---------CCeEEEEeCCHHHHHHHHh
Confidence 359999999999999888664 2379999999987666544
No 50
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=94.70 E-value=0.12 Score=47.70 Aligned_cols=46 Identities=22% Similarity=0.418 Sum_probs=37.5
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+.+|+|+|||+|.++..+++.. | ..+++.||+|+.+.+.-++++.
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~---~----~~~v~~vD~s~~~~~~a~~~~~ 89 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKY---P----EATFTLVDMSEKMLEIAKNRFR 89 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHC---T----TCEEEEEESCHHHHHHHHHHTC
T ss_pred CCCeEEEecCCCCHHHHHHHHhC---C----CCeEEEEECCHHHHHHHHHhhc
Confidence 45799999999999998887643 2 3489999999999888777764
No 51
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=94.68 E-value=0.062 Score=52.96 Aligned_cols=70 Identities=21% Similarity=0.331 Sum_probs=48.0
Q ss_pred CCCCCCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChh
Q 011546 123 DVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT 202 (483)
Q Consensus 123 ~~~G~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (483)
..+|. .|.+.+.+- ..+++. .+....-+|+|+|||+|.|+.-+++.... ...+++-||+|+.
T Consensus 18 k~~GQ--~fL~d~~i~--------~~iv~~---~~~~~~~~VLEIG~G~G~lt~~La~~~~~-----~~~~V~avDid~~ 79 (279)
T 3uzu_A 18 KRFGQ--NFLVDHGVI--------DAIVAA---IRPERGERMVEIGPGLGALTGPVIARLAT-----PGSPLHAVELDRD 79 (279)
T ss_dssp CCCSC--CEECCHHHH--------HHHHHH---HCCCTTCEEEEECCTTSTTHHHHHHHHCB-----TTBCEEEEECCHH
T ss_pred ccCCc--cccCCHHHH--------HHHHHh---cCCCCcCEEEEEccccHHHHHHHHHhCCC-----cCCeEEEEECCHH
Confidence 34664 799887653 223332 23333458999999999999998875321 0135899999999
Q ss_pred hHHHHHHh
Q 011546 203 LQKLQHHN 210 (483)
Q Consensus 203 Lr~~Q~~~ 210 (483)
+.+.-+++
T Consensus 80 ~l~~a~~~ 87 (279)
T 3uzu_A 80 LIGRLEQR 87 (279)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 98876665
No 52
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=94.65 E-value=0.16 Score=45.32 Aligned_cols=43 Identities=12% Similarity=0.027 Sum_probs=34.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+-+|+|+|||+|.++..+.+. ..+++.||+|+.+.+.-++++.
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~~~ 75 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAAN---------GYDVDAWDKNAMSIANVERIKS 75 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCeEEEEcCCCCHHHHHHHHC---------CCeEEEEECCHHHHHHHHHHHH
Confidence 459999999999988877542 2379999999998887777664
No 53
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=94.65 E-value=0.21 Score=47.21 Aligned_cols=54 Identities=15% Similarity=0.176 Sum_probs=37.8
Q ss_pred HHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 148 WAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 148 ~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
++.+.+.... |...+|+|+|||+|.++..+++. ..+++-||+|+.+.+.-++++
T Consensus 39 ~~~~~l~~~~-~~~~~vLDiGcG~G~~~~~l~~~---------~~~v~gvD~s~~~~~~a~~~~ 92 (263)
T 3pfg_A 39 DLAALVRRHS-PKAASLLDVACGTGMHLRHLADS---------FGTVEGLELSADMLAIARRRN 92 (263)
T ss_dssp HHHHHHHHHC-TTCCEEEEETCTTSHHHHHHTTT---------SSEEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHHhhC-CCCCcEEEeCCcCCHHHHHHHHc---------CCeEEEEECCHHHHHHHHhhC
Confidence 3344443332 33469999999999988776432 126899999999888777665
No 54
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=94.62 E-value=0.13 Score=46.95 Aligned_cols=42 Identities=24% Similarity=0.406 Sum_probs=33.5
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
..+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-++++
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~~ 85 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAA---------GFDVDATDGSPELAAEASRRL 85 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHc---------CCeEEEECCCHHHHHHHHHhc
Confidence 459999999999988877642 237999999999877766655
No 55
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=94.61 E-value=0.14 Score=46.83 Aligned_cols=44 Identities=11% Similarity=0.290 Sum_probs=35.7
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
..+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-++++..
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~~~~ 74 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASK---------GYSVTGIDINSEAIRLAETAARS 74 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHTTC
T ss_pred CCeEEEECCCCCHHHHHHHhC---------CCeEEEEECCHHHHHHHHHHHHh
Confidence 459999999999998877653 23799999999998887777653
No 56
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=94.58 E-value=0.054 Score=51.81 Aligned_cols=48 Identities=21% Similarity=0.382 Sum_probs=37.8
Q ss_pred cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+....-+|+|+|||+|.++..+++.. .+++-||+|+.+.+.-++++.
T Consensus 26 ~~~~~~~~VLDiG~G~G~lt~~l~~~~---------~~v~~vD~~~~~~~~a~~~~~ 73 (244)
T 1qam_A 26 IRLNEHDNIFEIGSGKGHFTLELVQRC---------NFVTAIEIDHKLCKTTENKLV 73 (244)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHS---------SEEEEECSCHHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEeCCchHHHHHHHHcC---------CeEEEEECCHHHHHHHHHhhc
Confidence 343334589999999999998887642 378999999999888777764
No 57
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=94.57 E-value=0.1 Score=46.99 Aligned_cols=44 Identities=18% Similarity=0.290 Sum_probs=34.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.-+|+|+|||+|.++..++.. + ..+++-||+|+.+.+.-++++.
T Consensus 45 ~~~vLDlgcG~G~~~~~~~~~----~----~~~v~~vD~~~~~~~~a~~~~~ 88 (189)
T 3p9n_A 45 GLAVLDLYAGSGALGLEALSR----G----AASVLFVESDQRSAAVIARNIE 88 (189)
T ss_dssp TCEEEEETCTTCHHHHHHHHT----T----CSEEEEEECCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcCHHHHHHHHC----C----CCeEEEEECCHHHHHHHHHHHH
Confidence 358999999999998876541 1 2378999999999887777664
No 58
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=94.55 E-value=0.05 Score=50.62 Aligned_cols=92 Identities=18% Similarity=0.234 Sum_probs=57.4
Q ss_pred hhcCCCCcccCCCCCCCCCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCcc
Q 011546 110 VLTNPKAGFYINRDVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFT 189 (483)
Q Consensus 110 aLY~P~~GYY~~~~~~G~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~ 189 (483)
..|.|..-|+.....+|. |.++++|.+....-+ .+.. ......+|+|+|||+|.++..+.+.....+ ..
T Consensus 44 ~~f~~~~~y~d~~~~~~~-~~~~~~p~~~~~~~~--------~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~-~~ 112 (227)
T 1r18_A 44 KHYSPRNPYMDAPQPIGG-GVTISAPHMHAFALE--------YLRD-HLKPGARILDVGSGSGYLTACFYRYIKAKG-VD 112 (227)
T ss_dssp GGTCSSCTTBSSCEEEET-TEEECCHHHHHHHHH--------HTTT-TCCTTCEEEEESCTTSHHHHHHHHHHHHSC-CC
T ss_pred HHcCCcccccCCCcccCC-CCccCChHHHHHHHH--------HHHh-hCCCCCEEEEECCCccHHHHHHHHhccccc-CC
Confidence 466777656555445663 556777665432222 1111 122235999999999999998877553200 00
Q ss_pred ccceEEEEecChhhHHHHHHhcc
Q 011546 190 ESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 190 ~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
...+++.||+|+.+.+.-++++.
T Consensus 113 ~~~~v~~vD~~~~~~~~a~~~~~ 135 (227)
T 1r18_A 113 ADTRIVGIEHQAELVRRSKANLN 135 (227)
T ss_dssp TTCEEEEEESCHHHHHHHHHHHH
T ss_pred ccCEEEEEEcCHHHHHHHHHHHH
Confidence 12379999999999888777764
No 59
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=94.51 E-value=0.079 Score=46.57 Aligned_cols=50 Identities=18% Similarity=0.203 Sum_probs=37.6
Q ss_pred cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+.....-+|+|+|||+|.++..+++. . ...+++.||+|+.+.+.-++++.
T Consensus 21 ~~~~~~~~vldiG~G~G~~~~~l~~~---~----~~~~v~~vD~~~~~~~~a~~~~~ 70 (178)
T 3hm2_A 21 LAPKPHETLWDIGGGSGSIAIEWLRS---T----PQTTAVCFEISEERRERILSNAI 70 (178)
T ss_dssp HCCCTTEEEEEESTTTTHHHHHHHTT---S----SSEEEEEECSCHHHHHHHHHHHH
T ss_pred hcccCCCeEEEeCCCCCHHHHHHHHH---C----CCCeEEEEeCCHHHHHHHHHHHH
Confidence 34434469999999999998887643 2 23589999999998877776664
No 60
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=94.50 E-value=0.091 Score=54.71 Aligned_cols=75 Identities=16% Similarity=0.229 Sum_probs=51.8
Q ss_pred CCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCc-C-----ccccceEEEEecC
Q 011546 127 AEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFK-N-----FTESLHIHLVECS 200 (483)
Q Consensus 127 ~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p-~-----~~~~l~y~iVE~S 200 (483)
..|.|||+.+|..+.-+++ ......+|++.|||+|.+...+.+.++... + .....+++-+|++
T Consensus 149 ~~G~fyTP~~v~~~mv~~l-----------~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~ 217 (445)
T 2okc_A 149 GAGQYFTPRPLIQAMVDCI-----------NPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNT 217 (445)
T ss_dssp CCGGGCCCHHHHHHHHHHH-----------CCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESC
T ss_pred cCCcccCcHHHHHHHHHHh-----------CCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCC
Confidence 4689999998765443332 111235899999999999999988875321 0 0122478999999
Q ss_pred hhhHHHHHHhcc
Q 011546 201 PTLQKLQHHNLK 212 (483)
Q Consensus 201 p~Lr~~Q~~~L~ 212 (483)
|...+.-+.++.
T Consensus 218 ~~~~~lA~~nl~ 229 (445)
T 2okc_A 218 PLVVTLASMNLY 229 (445)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 998877666553
No 61
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=94.48 E-value=0.16 Score=45.86 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=32.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
.+|+|+|||+|.++..+++. ..+++-||+|+.+.+.-+++.
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~---------~~~v~gvD~s~~~~~~a~~~~ 83 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASL---------GHQIEGLEPATRLVELARQTH 83 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHT---------TCCEEEECCCHHHHHHHHHHC
T ss_pred CeEEEecCCCCHHHHHHHhc---------CCeEEEEeCCHHHHHHHHHhC
Confidence 48999999999988877652 227899999999887766654
No 62
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=94.47 E-value=0.2 Score=46.79 Aligned_cols=44 Identities=14% Similarity=0.308 Sum_probs=35.4
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 159 p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
+...+|+|+|||+|.++..+++. ..+++-||+|+.+.+.-++++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~~ 81 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR---------GYRYIALDADAAMLEVFRQKI 81 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT---------TCEEEEEESCHHHHHHHHHHT
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC---------CCEEEEEECCHHHHHHHHHHh
Confidence 34469999999999998887642 137999999999988877766
No 63
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=94.46 E-value=0.14 Score=47.20 Aligned_cols=55 Identities=25% Similarity=0.297 Sum_probs=38.2
Q ss_pred HHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 147 VWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 147 ~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.++.+.+.... ...+|+|+|||+|.++..+.+. .+ +++-||+|+.+.+.-++++.
T Consensus 31 ~~~~~~l~~~~--~~~~vLDiGcG~G~~~~~l~~~---~~------~v~gvD~s~~~~~~a~~~~~ 85 (250)
T 2p7i_A 31 PFMVRAFTPFF--RPGNLLELGSFKGDFTSRLQEH---FN------DITCVEASEEAISHAQGRLK 85 (250)
T ss_dssp HHHHHHHGGGC--CSSCEEEESCTTSHHHHHHTTT---CS------CEEEEESCHHHHHHHHHHSC
T ss_pred HHHHHHHHhhc--CCCcEEEECCCCCHHHHHHHHh---CC------cEEEEeCCHHHHHHHHHhhh
Confidence 44455554332 2348999999999988776431 11 68999999998877776653
No 64
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=94.40 E-value=0.12 Score=49.16 Aligned_cols=47 Identities=21% Similarity=0.281 Sum_probs=37.3
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 159 p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+...+|+|+|||+|.++..+.+. .| ..+++.||+|+.+.+.-++++.
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~---~~----~~~v~~vD~s~~~~~~a~~~~~ 82 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKN---NP----DAEITSIDISPESLEKARENTE 82 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHH---CT----TSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCeEEEecCCCCHHHHHHHHh---CC----CCEEEEEECCHHHHHHHHHHHH
Confidence 44569999999999999888664 22 2489999999999887777664
No 65
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=94.34 E-value=0.045 Score=51.24 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=31.7
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHh
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN 210 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~ 210 (483)
.-+|+|+|||+|.++..+.+. ..+++-||+|+.+.+.-+++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---------~~~v~gvD~s~~~~~~a~~~ 82 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEE---------GIESIGVDINEDMIKFCEGK 82 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHH---------TCCEEEECSCHHHHHHHHTT
T ss_pred CCeEEEEeCCCCHHHHHHHhC---------CCcEEEEECCHHHHHHHHhh
Confidence 358999999999998766542 12689999999987766554
No 66
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=94.30 E-value=0.15 Score=45.96 Aligned_cols=44 Identities=18% Similarity=0.202 Sum_probs=35.1
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+|+|+|||+|.++..+++. .+ . +++.||+|+.+.+.-++++.
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~---~~---~--~v~~~D~s~~~~~~a~~~~~ 86 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLG---GF---P--NVTSVDYSSVVVAAMQACYA 86 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHT---TC---C--CEEEEESCHHHHHHHHHHTT
T ss_pred CCeEEEECCCCcHHHHHHHHc---CC---C--cEEEEeCCHHHHHHHHHhcc
Confidence 358999999999999887653 11 1 68999999999888777764
No 67
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=94.30 E-value=0.25 Score=46.22 Aligned_cols=49 Identities=12% Similarity=0.083 Sum_probs=36.8
Q ss_pred cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
++.....+|+|+|||+|.++..+++. . .. +++.||+|+.+.+.-++++.
T Consensus 40 ~~~~~~~~vLD~GcG~G~~~~~l~~~---~---~~--~v~~vD~s~~~~~~a~~~~~ 88 (253)
T 3g5l_A 40 LPDFNQKTVLDLGCGFGWHCIYAAEH---G---AK--KVLGIDLSERMLTEAKRKTT 88 (253)
T ss_dssp CCCCTTCEEEEETCTTCHHHHHHHHT---T---CS--EEEEEESCHHHHHHHHHHCC
T ss_pred hhccCCCEEEEECCCCCHHHHHHHHc---C---CC--EEEEEECCHHHHHHHHHhhc
Confidence 33334569999999999988887653 1 11 79999999999888777664
No 68
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=94.24 E-value=0.3 Score=42.98 Aligned_cols=43 Identities=14% Similarity=0.294 Sum_probs=34.3
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
...+|+|+|||.|.++..+.+. ..+++.||+|+.+.+.-++++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~---------~~~v~~~D~~~~~~~~a~~~~ 88 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ---------GHDVLGTDLDPILIDYAKQDF 88 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEECCCCCHHHHHHHHC---------CCcEEEEcCCHHHHHHHHHhC
Confidence 3469999999999998877652 137999999999887776665
No 69
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=94.21 E-value=0.3 Score=47.65 Aligned_cols=51 Identities=22% Similarity=0.269 Sum_probs=38.8
Q ss_pred HHcC-CCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 154 EQMG-QPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 154 ~~~g-~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+.++ .+..-+|+|+|||+|.++..+++.. ..+++-||+|+.+.+.-++++.
T Consensus 110 ~~l~~~~~~~~vLDiGcG~G~~~~~la~~~--------~~~v~gvD~s~~~~~~a~~~~~ 161 (312)
T 3vc1_A 110 DHLGQAGPDDTLVDAGCGRGGSMVMAHRRF--------GSRVEGVTLSAAQADFGNRRAR 161 (312)
T ss_dssp TTSCCCCTTCEEEEESCTTSHHHHHHHHHH--------CCEEEEEESCHHHHHHHHHHHH
T ss_pred HHhccCCCCCEEEEecCCCCHHHHHHHHHc--------CCEEEEEeCCHHHHHHHHHHHH
Confidence 3444 3345699999999999998887643 1378999999998887777664
No 70
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=94.18 E-value=0.11 Score=45.55 Aligned_cols=44 Identities=14% Similarity=0.292 Sum_probs=35.6
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
...+|+|+|||+|.++..+++ ...+++.||+|+.+.+.-++++.
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~---------~~~~v~~vD~~~~~~~~a~~~~~ 78 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK---------RCKFVYAIDYLDGAIEVTKQNLA 78 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT---------TSSEEEEEECSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHh---------cCCeEEEEeCCHHHHHHHHHHHH
Confidence 345999999999998887764 22479999999999888777764
No 71
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=94.16 E-value=0.058 Score=52.28 Aligned_cols=43 Identities=21% Similarity=0.250 Sum_probs=33.1
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.-+|+|+|||+|.|.. |.. . ...+++-||+|+.+.+.-++++.
T Consensus 22 ~~~VLEIG~G~G~lt~--l~~---~----~~~~v~avEid~~~~~~a~~~~~ 64 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE--PVG---E----RLDQLTVIELDRDLAARLQTHPF 64 (252)
T ss_dssp TCCEEEECCTTTTTHH--HHH---T----TCSCEEEECCCHHHHHHHHTCTT
T ss_pred cCEEEEECCCCcHHHH--hhh---C----CCCeEEEEECCHHHHHHHHHHhc
Confidence 3589999999999999 432 1 11248999999999988777764
No 72
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=94.14 E-value=0.094 Score=51.82 Aligned_cols=72 Identities=17% Similarity=0.272 Sum_probs=47.8
Q ss_pred CCCChhHHHHHHHHHHHHHHH----HHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHH
Q 011546 133 TSPEVSQMFGEMVGVWAMCLW----EQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQH 208 (483)
Q Consensus 133 TSpeIs~~FGe~Ia~~i~~~w----~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~ 208 (483)
+.|+....|...++.+..... +....+...+|+|+|||+|.++..+++. +| .++++.+|+ |.+.+.-+
T Consensus 138 ~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~---~p----~~~~~~~D~-~~~~~~a~ 209 (332)
T 3i53_A 138 SDPVLSASFDTLMSHHLELDYTGIAAKYDWAALGHVVDVGGGSGGLLSALLTA---HE----DLSGTVLDL-QGPASAAH 209 (332)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHTTGGGSSCCGGGSEEEEETCTTSHHHHHHHHH---CT----TCEEEEEEC-HHHHHHHH
T ss_pred hCHHHHHHHHHHHHHhHHhhHHHHHHhCCCCCCCEEEEeCCChhHHHHHHHHH---CC----CCeEEEecC-HHHHHHHH
Confidence 356667777777665432222 2233334569999999999999988764 33 347889999 77766666
Q ss_pred Hhcc
Q 011546 209 HNLK 212 (483)
Q Consensus 209 ~~L~ 212 (483)
+++.
T Consensus 210 ~~~~ 213 (332)
T 3i53_A 210 RRFL 213 (332)
T ss_dssp HHHH
T ss_pred Hhhh
Confidence 5554
No 73
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=94.12 E-value=0.084 Score=48.76 Aligned_cols=58 Identities=12% Similarity=0.091 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 145 VGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 145 Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+..++.+.+...+. ...+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-++++.
T Consensus 23 ~~~~~~~~l~~~~~-~~~~vLdiG~G~G~~~~~l~~~---------~~~~~~~D~s~~~~~~a~~~~~ 80 (246)
T 1y8c_A 23 WSDFIIEKCVENNL-VFDDYLDLACGTGNLTENLCPK---------FKNTWAVDLSQEMLSEAENKFR 80 (246)
T ss_dssp HHHHHHHHHHTTTC-CTTEEEEETCTTSTTHHHHGGG---------SSEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCCeEEEeCCCCCHHHHHHHHC---------CCcEEEEECCHHHHHHHHHHHh
Confidence 44555555554432 3469999999999998877542 1379999999999888777664
No 74
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=94.12 E-value=0.28 Score=44.45 Aligned_cols=44 Identities=14% Similarity=0.229 Sum_probs=34.0
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+|+|+|||+|.++..+.+ .+ ..+++.||+|+.+.+.-++++.
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~----~~----~~~v~~vD~s~~~~~~a~~~~~ 104 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHK----LG----AKSVLATDISDESMTAAEENAA 104 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHH----TT----CSEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHH----CC----CCEEEEEECCHHHHHHHHHHHH
Confidence 35999999999998877543 22 2379999999999887777664
No 75
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=94.07 E-value=0.24 Score=45.73 Aligned_cols=45 Identities=11% Similarity=0.142 Sum_probs=36.0
Q ss_pred CCcEEEEEcCC-cchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 160 NRVNLVELGPG-RGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 160 ~~~~IvEiGaG-~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..-+|+|+||| +|.++.-+.+.. ..+++.||+|+.+.+.-++++.
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~--------~~~v~~vD~s~~~~~~a~~~~~ 100 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF--------NCKVTATEVDEEFFEYARRNIE 100 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH--------CCEEEEEECCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc--------CCEEEEEECCHHHHHHHHHHHH
Confidence 34699999999 999998876643 2379999999998887777664
No 76
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=94.05 E-value=0.14 Score=48.88 Aligned_cols=62 Identities=10% Similarity=0.024 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 143 e~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+..|+...+.....+...+|+|+|||+|.++..+.+. + ..+++.||+|+.+.+.-++++.
T Consensus 47 ~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~----~----~~~v~gvD~s~~~~~~a~~~~~ 108 (298)
T 1ri5_A 47 RNANNFIKACLIRLYTKRGDSVLDLGCGKGGDLLKYERA----G----IGEYYGVDIAEVSINDARVRAR 108 (298)
T ss_dssp HHHHHHHHHHHHHHHCCTTCEEEEETCTTTTTHHHHHHH----T----CSEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHC----C----CCEEEEEECCHHHHHHHHHHHH
Confidence 344556555543322334469999999999988875442 1 2379999999999888777764
No 77
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=94.02 E-value=0.11 Score=47.22 Aligned_cols=44 Identities=14% Similarity=0.169 Sum_probs=35.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+|+|+|||+|.++..+++.. | ..+++.||+|+.+.+.-++++.
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~---~----~~~v~~vD~s~~~~~~a~~~~~ 110 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVR---P----EAHFTLLDSLGKRVRFLRQVQH 110 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHC---T----TSEEEEEESCHHHHHHHHHHHH
T ss_pred CeEEEECCCCCHHHHHHHHHC---C----CCEEEEEeCCHHHHHHHHHHHH
Confidence 499999999999998887542 2 2489999999998877666654
No 78
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=94.00 E-value=0.054 Score=51.28 Aligned_cols=44 Identities=11% Similarity=0.098 Sum_probs=33.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.-+|+|+|||.|..+.-|.+ ..| -+++.||+||.+.+.-+++..
T Consensus 61 G~rVLdiG~G~G~~~~~~~~---~~~-----~~v~~id~~~~~~~~a~~~~~ 104 (236)
T 3orh_A 61 GGRVLEVGFGMAIAASKVQE---API-----DEHWIIECNDGVFQRLRDWAP 104 (236)
T ss_dssp CEEEEEECCTTSHHHHHHTT---SCE-----EEEEEEECCHHHHHHHHHHGG
T ss_pred CCeEEEECCCccHHHHHHHH---hCC-----cEEEEEeCCHHHHHHHHHHHh
Confidence 36999999999998877643 122 278999999998877666554
No 79
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=93.99 E-value=0.12 Score=47.06 Aligned_cols=50 Identities=16% Similarity=0.264 Sum_probs=38.2
Q ss_pred cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
++.....+|+|+|||+|.++..+++. .| ..+++.||+|+.+.+.-++++.
T Consensus 36 l~~~~~~~vLDiG~G~G~~~~~la~~---~~----~~~v~~vD~s~~~~~~a~~~~~ 85 (204)
T 3e05_A 36 LRLQDDLVMWDIGAGSASVSIEASNL---MP----NGRIFALERNPQYLGFIRDNLK 85 (204)
T ss_dssp TTCCTTCEEEEETCTTCHHHHHHHHH---CT----TSEEEEEECCHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCCHHHHHHHHH---CC----CCEEEEEeCCHHHHHHHHHHHH
Confidence 34444469999999999998887664 22 3479999999999888777664
No 80
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=93.95 E-value=0.077 Score=51.78 Aligned_cols=49 Identities=6% Similarity=-0.048 Sum_probs=36.2
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 159 p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
+...+|+|+|||+|.++..+... .. ...+++.||+|+.+.+.-++++..
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~--~~----~~~~v~gvD~s~~~~~~a~~~~~~ 165 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYS--AC----PGVQLVGIDYDPEALDGATRLAAG 165 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCT--TC----TTCEEEEEESCHHHHHHHHHHHTT
T ss_pred CCCCEEEEecCCCCHHHHHHHHh--cC----CCCeEEEEECCHHHHHHHHHHHHh
Confidence 34469999999999987665311 12 235899999999998888777753
No 81
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=93.88 E-value=0.25 Score=46.20 Aligned_cols=46 Identities=17% Similarity=0.218 Sum_probs=36.4
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 159 p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+...+|+|+|||+|.++..+.+.. + .+++-||+|+.+.+.-++++.
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~---~-----~~v~~vD~s~~~~~~a~~~~~ 90 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYV---K-----GQITGIDLFPDFIEIFNENAV 90 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHC---C-----SEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhC---C-----CeEEEEECCHHHHHHHHHHHH
Confidence 344599999999999998887642 2 179999999998887777664
No 82
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=93.83 E-value=0.16 Score=50.66 Aligned_cols=64 Identities=20% Similarity=0.300 Sum_probs=45.6
Q ss_pred CCCChhHHHHHHHHHH----HHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhh
Q 011546 133 TSPEVSQMFGEMVGVW----AMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (483)
Q Consensus 133 TSpeIs~~FGe~Ia~~----i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (483)
+.|+....|...++.+ ...+.+..+.+...+|+|+|||+|.++..+++. +| .++++.+|.++.+
T Consensus 153 ~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~---~p----~~~~~~~D~~~~~ 220 (348)
T 3lst_A 153 GDAEVEALYYEGMETVSAAEHLILARAGDFPATGTVADVGGGRGGFLLTVLRE---HP----GLQGVLLDRAEVV 220 (348)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHH---CT----TEEEEEEECHHHH
T ss_pred hCHHHHHHHHHHHHHhhhhhHHHHHHhCCccCCceEEEECCccCHHHHHHHHH---CC----CCEEEEecCHHHh
Confidence 4577777787776654 223445566666679999999999999988764 33 3478899996544
No 83
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=93.81 E-value=0.12 Score=50.70 Aligned_cols=48 Identities=25% Similarity=0.394 Sum_probs=37.5
Q ss_pred cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+....-+|+|+|||+|.++..+++.. .+++-||+|+.+.+.-++++.
T Consensus 24 ~~~~~~~~VLDiG~G~G~lt~~L~~~~---------~~v~~vD~~~~~~~~a~~~~~ 71 (285)
T 1zq9_A 24 AALRPTDVVLEVGPGTGNMTVKLLEKA---------KKVVACELDPRLVAELHKRVQ 71 (285)
T ss_dssp TCCCTTCEEEEECCTTSTTHHHHHHHS---------SEEEEEESCHHHHHHHHHHHT
T ss_pred cCCCCCCEEEEEcCcccHHHHHHHhhC---------CEEEEEECCHHHHHHHHHHHH
Confidence 343344589999999999999887641 278999999999888777764
No 84
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=93.78 E-value=0.2 Score=49.80 Aligned_cols=71 Identities=15% Similarity=0.221 Sum_probs=45.9
Q ss_pred CCChhHHHHHHHHHH----HHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHH
Q 011546 134 SPEVSQMFGEMVGVW----AMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHH 209 (483)
Q Consensus 134 SpeIs~~FGe~Ia~~----i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~ 209 (483)
.|+....|...+... +..+.+..+.+...+|+|+|||+|.++..+++. .| .++++.+|+ |.+.+.-++
T Consensus 153 ~p~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~---~~----~~~~~~~D~-~~~~~~a~~ 224 (360)
T 1tw3_A 153 RPDLRASFDSLLACDQDVAFDAPAAAYDWTNVRHVLDVGGGKGGFAAAIARR---AP----HVSATVLEM-AGTVDTARS 224 (360)
T ss_dssp CHHHHHHHHHHHTTTTTTTTHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHH---CT----TCEEEEEEC-TTHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHhHHHHHHhCCCccCcEEEEeCCcCcHHHHHHHHh---CC----CCEEEEecC-HHHHHHHHH
Confidence 455666666654321 122334455445579999999999999888764 23 347889999 766666555
Q ss_pred hcc
Q 011546 210 NLK 212 (483)
Q Consensus 210 ~L~ 212 (483)
++.
T Consensus 225 ~~~ 227 (360)
T 1tw3_A 225 YLK 227 (360)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 85
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=93.73 E-value=0.21 Score=46.72 Aligned_cols=44 Identities=25% Similarity=0.355 Sum_probs=36.0
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.-+|+|+|||+|.++..+++... .+++.||+|+.+.+.-++++.
T Consensus 92 ~~~vLdiG~G~G~~~~~la~~~~--------~~v~~vD~~~~~~~~a~~~~~ 135 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALISEIVK--------TDVYTIERIPELVEFAKRNLE 135 (235)
T ss_dssp TCCEEEECCTTSHHHHHHHHHHC--------SCEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcCHHHHHHHHHhC--------CEEEEEeCCHHHHHHHHHHHH
Confidence 35899999999999998876531 378999999999888777764
No 86
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=93.70 E-value=0.18 Score=48.42 Aligned_cols=43 Identities=12% Similarity=0.107 Sum_probs=34.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+|+|+|||+|.++.-+.+. ..+++.||+|+.+.+.-++++.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~---------g~~v~~vD~s~~~~~~a~~~~~ 163 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLL---------GYDVTSWDHNENSIAFLNETKE 163 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHC---------CCeEEEEECCHHHHHHHHHHHH
Confidence 359999999999988877542 2379999999998877766664
No 87
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=93.68 E-value=0.22 Score=50.60 Aligned_cols=46 Identities=13% Similarity=0.107 Sum_probs=36.5
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+|+|+|||+|.++..+++... ...+++-||+|+.+.+.-++++.
T Consensus 84 ~~~VLDlGcG~G~~~~~la~~~~------~~~~v~gvD~s~~~l~~a~~~~~ 129 (383)
T 4fsd_A 84 GATVLDLGCGTGRDVYLASKLVG------EHGKVIGVDMLDNQLEVARKYVE 129 (383)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHT------TTCEEEEEECCHHHHHHHHHTHH
T ss_pred CCEEEEecCccCHHHHHHHHHhC------CCCEEEEEECCHHHHHHHHHHHH
Confidence 45999999999999988877542 12379999999998887776653
No 88
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=93.65 E-value=0.18 Score=47.00 Aligned_cols=45 Identities=16% Similarity=0.181 Sum_probs=35.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
..+|+|+|||+|.++..+++.. ..+++.||+|+.+.+.-++++..
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~--------~~~v~~vD~s~~~~~~a~~~~~~ 124 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPL--------FREVDMVDITEDFLVQAKTYLGE 124 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTT--------CSEEEEEESCHHHHHHHHHHTGG
T ss_pred CCEEEEECCCCCHHHHHHHHhc--------CCEEEEEeCCHHHHHHHHHHhhh
Confidence 4699999999999887765421 23799999999998887777653
No 89
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=93.65 E-value=0.2 Score=48.20 Aligned_cols=42 Identities=12% Similarity=-0.114 Sum_probs=32.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
..+|+|+|||+|.++.-+.+. ..+++-||+|+.+-+.-+++.
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~---------G~~V~gvD~S~~~i~~a~~~~ 110 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADR---------GHTVVGVEISEIGIREFFAEQ 110 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHT---------TCEEEEECSCHHHHHHHHHHT
T ss_pred CCeEEEeCCCCcHHHHHHHHC---------CCeEEEEECCHHHHHHHHHhc
Confidence 459999999999988766431 127899999999987755544
No 90
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=93.61 E-value=0.15 Score=47.62 Aligned_cols=49 Identities=12% Similarity=0.268 Sum_probs=37.8
Q ss_pred cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
++.+...+|+|+|||+|.++..+++.. ..+++-||+|+.+.+.-++++.
T Consensus 32 ~~~~~~~~VLDiGcG~G~~~~~la~~~--------~~~v~gvD~s~~~l~~a~~~~~ 80 (256)
T 1nkv_A 32 LRMKPGTRILDLGSGSGEMLCTWARDH--------GITGTGIDMSSLFTAQAKRRAE 80 (256)
T ss_dssp TCCCTTCEEEEETCTTCHHHHHHHHHT--------CCEEEEEESCHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCCHHHHHHHHhc--------CCeEEEEeCCHHHHHHHHHHHH
Confidence 344445699999999999998887643 1378999999999887776664
No 91
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=93.60 E-value=0.26 Score=48.81 Aligned_cols=72 Identities=17% Similarity=0.292 Sum_probs=47.7
Q ss_pred cCCCChhHHHHHHHHHHHH---HHHHHcCCCC-CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHH
Q 011546 132 ITSPEVSQMFGEMVGVWAM---CLWEQMGQPN-RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ 207 (483)
Q Consensus 132 iTSpeIs~~FGe~Ia~~i~---~~w~~~g~p~-~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q 207 (483)
-+.|+....|...+..... .+....+... ..+|+|+|||+|.++..+++. +|. ++++.+|+ |.+.+.-
T Consensus 147 ~~~~~~~~~f~~~m~~~~~~~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~---~p~----~~~~~~D~-~~~~~~a 218 (352)
T 3mcz_A 147 AHDTRARDAFNDAMVRLSQPMVDVVSELGVFARARTVIDLAGGHGTYLAQVLRR---HPQ----LTGQIWDL-PTTRDAA 218 (352)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTCCEEEEETCTTCHHHHHHHHH---CTT----CEEEEEEC-GGGHHHH
T ss_pred ccCHHHHHHHHHHHHhhhhhHHHHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHh---CCC----CeEEEEEC-HHHHHHH
Confidence 4567777777766554332 3444444433 579999999999999888764 333 57899999 5555544
Q ss_pred HHhc
Q 011546 208 HHNL 211 (483)
Q Consensus 208 ~~~L 211 (483)
++++
T Consensus 219 ~~~~ 222 (352)
T 3mcz_A 219 RKTI 222 (352)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 92
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=93.58 E-value=0.18 Score=51.46 Aligned_cols=62 Identities=13% Similarity=0.094 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHh
Q 011546 140 MFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN 210 (483)
Q Consensus 140 ~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~ 210 (483)
.+-+.....+..+.+.++.+...+|+|+|||+|.++..+.+. ..+++-||+|+.+.+.-+++
T Consensus 87 ~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~---------g~~v~gvD~s~~~~~~a~~~ 148 (416)
T 4e2x_A 87 VMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA---------GVRHLGFEPSSGVAAKAREK 148 (416)
T ss_dssp HHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT---------TCEEEEECCCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc---------CCcEEEECCCHHHHHHHHHc
Confidence 333333344444455566555569999999999988877542 12789999999887665544
No 93
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=93.58 E-value=0.13 Score=45.89 Aligned_cols=44 Identities=16% Similarity=0.070 Sum_probs=35.2
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..-+|+|+|||+|.++..+.+. ..+++-||+||.+.+.-++++.
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~---------~~~v~~vD~s~~~l~~a~~~~~ 65 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL---------SKKVYAFDVQEQALGKTSQRLS 65 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT---------SSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHHHh---------CCEEEEEECCHHHHHHHHHHHH
Confidence 3459999999999998877542 2379999999999887777664
No 94
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=93.58 E-value=0.14 Score=45.21 Aligned_cols=44 Identities=20% Similarity=0.310 Sum_probs=35.2
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
...+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-++++.
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~---------~~~v~~~D~~~~~~~~a~~~~~ 95 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE---------VKSTTMADINRRAIKLAKENIK 95 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG---------SSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHc---------CCeEEEEECCHHHHHHHHHHHH
Confidence 3459999999999988876542 2379999999999888777664
No 95
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=93.58 E-value=0.18 Score=47.15 Aligned_cols=48 Identities=8% Similarity=0.092 Sum_probs=36.6
Q ss_pred cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
++.+...+|+|+|||+|.++..+.+. . -+++.||+|+.+.+.-++++.
T Consensus 17 ~~~~~~~~vLDiGcG~G~~~~~l~~~---~------~~v~~vD~s~~~~~~a~~~~~ 64 (239)
T 1xxl_A 17 AECRAEHRVLDIGAGAGHTALAFSPY---V------QECIGVDATKEMVEVASSFAQ 64 (239)
T ss_dssp HTCCTTCEEEEESCTTSHHHHHHGGG---S------SEEEEEESCHHHHHHHHHHHH
T ss_pred hCcCCCCEEEEEccCcCHHHHHHHHh---C------CEEEEEECCHHHHHHHHHHHH
Confidence 44445569999999999988776432 1 179999999999887777664
No 96
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=93.52 E-value=0.29 Score=46.35 Aligned_cols=46 Identities=11% Similarity=0.159 Sum_probs=36.2
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 159 p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+...+|+|+|||+|.++..+.+. ...+++-||+|+.+.+.-++++.
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~--------~~~~v~gvD~s~~~~~~a~~~~~ 90 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGH--------VTGQVTGLDFLSGFIDIFNRNAR 90 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTT--------CSSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc--------cCCEEEEEeCCHHHHHHHHHHHH
Confidence 34569999999999998887642 22479999999998887777664
No 97
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=93.40 E-value=0.14 Score=46.08 Aligned_cols=47 Identities=13% Similarity=-0.006 Sum_probs=37.1
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
..+|+|+|||+|.++..+++.+. | ..+++-||+|+.+.+.-++++..
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~--~----~~~v~~vD~s~~~~~~a~~~~~~ 69 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVG--E----NGRVFGFDIQDKAIANTTKKLTD 69 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHC--T----TCEEEEECSCHHHHHHHHHHHHH
T ss_pred CCEEEEcCCCCCHHHHHHHHHhC--C----CCEEEEEECCHHHHHHHHHHHHH
Confidence 35999999999999988877542 1 23799999999998887777643
No 98
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=93.36 E-value=0.16 Score=50.83 Aligned_cols=51 Identities=16% Similarity=0.220 Sum_probs=37.0
Q ss_pred HHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 154 EQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 154 ~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+.++.+...+|+|+|||+|.++..+++. +| .++++.+|+ |.+.+.-++++.
T Consensus 176 ~~~~~~~~~~vlDvG~G~G~~~~~l~~~---~~----~~~~~~~D~-~~~~~~a~~~~~ 226 (374)
T 1qzz_A 176 DAYDWSAVRHVLDVGGGNGGMLAAIALR---AP----HLRGTLVEL-AGPAERARRRFA 226 (374)
T ss_dssp HTSCCTTCCEEEEETCTTSHHHHHHHHH---CT----TCEEEEEEC-HHHHHHHHHHHH
T ss_pred HhCCCCCCCEEEEECCCcCHHHHHHHHH---CC----CCEEEEEeC-HHHHHHHHHHHH
Confidence 3344444579999999999999888764 23 347899999 877666665553
No 99
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=93.31 E-value=0.091 Score=50.71 Aligned_cols=62 Identities=18% Similarity=0.185 Sum_probs=42.3
Q ss_pred CccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHH
Q 011546 130 DFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHH 209 (483)
Q Consensus 130 DFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~ 209 (483)
.|.+.+.+- ..+++ ..+....-+|+|+|||+|.+...+++. + ..+++-||+|+.+.+.-++
T Consensus 12 nfl~d~~i~--------~~iv~---~~~~~~~~~VLDiG~G~G~lt~~L~~~----~----~~~v~avEid~~~~~~~~~ 72 (249)
T 3ftd_A 12 HLLVSEGVL--------KKIAE---ELNIEEGNTVVEVGGGTGNLTKVLLQH----P----LKKLYVIELDREMVENLKS 72 (249)
T ss_dssp SCEECHHHH--------HHHHH---HTTCCTTCEEEEEESCHHHHHHHHTTS----C----CSEEEEECCCHHHHHHHTT
T ss_pred cccCCHHHH--------HHHHH---hcCCCCcCEEEEEcCchHHHHHHHHHc----C----CCeEEEEECCHHHHHHHHh
Confidence 577776542 23332 234333458999999999998877542 1 2379999999999877655
Q ss_pred h
Q 011546 210 N 210 (483)
Q Consensus 210 ~ 210 (483)
+
T Consensus 73 ~ 73 (249)
T 3ftd_A 73 I 73 (249)
T ss_dssp S
T ss_pred c
Confidence 4
No 100
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=93.30 E-value=0.15 Score=44.82 Aligned_cols=47 Identities=17% Similarity=0.238 Sum_probs=36.3
Q ss_pred CCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 157 g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
......+|+|+|||+|.++..+++.. .+++.||+|+.+.+.-++++.
T Consensus 30 ~~~~~~~vldiG~G~G~~~~~l~~~~---------~~v~~~D~~~~~~~~a~~~~~ 76 (192)
T 1l3i_A 30 EPGKNDVAVDVGCGTGGVTLELAGRV---------RRVYAIDRNPEAISTTEMNLQ 76 (192)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHTTS---------SEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhc---------CEEEEEECCHHHHHHHHHHHH
Confidence 33344699999999999888775421 379999999998887777664
No 101
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=93.27 E-value=0.39 Score=43.22 Aligned_cols=44 Identities=11% Similarity=0.064 Sum_probs=33.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+|+|+|||+|.+...++.. + ..+++-||+|+.+.+.-++++.
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~----~----~~~v~~vD~s~~~~~~a~~~~~ 67 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVE----D----GYKTYGIEISDLQLKKAENFSR 67 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHH----T----TCEEEEEECCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHh----C----CCEEEEEECCHHHHHHHHHHHH
Confidence 359999999999986655532 1 1379999999999887776654
No 102
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=93.24 E-value=0.17 Score=46.87 Aligned_cols=45 Identities=18% Similarity=0.207 Sum_probs=35.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+|+|||+|.++..+++.+. ...+++-||+||.+.+.-++++.
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~------~~~~v~~vD~~~~~~~~a~~~~~ 104 (221)
T 3u81_A 60 SLVLELGAYCGYSAVRMARLLQ------PGARLLTMEINPDCAAITQQMLN 104 (221)
T ss_dssp SEEEEECCTTSHHHHHHHTTSC------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHhCC------CCCEEEEEeCChHHHHHHHHHHH
Confidence 4899999999999888865431 23489999999999888777664
No 103
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=93.17 E-value=0.43 Score=44.23 Aligned_cols=63 Identities=21% Similarity=0.268 Sum_probs=43.5
Q ss_pred CccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHH
Q 011546 130 DFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHH 209 (483)
Q Consensus 130 DFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~ 209 (483)
.++..|+...++..++...+ +...+|+|+|||+|.++..+++. ..+++-||+|+.+.+.-++
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~---------~~~~~vLDiGcG~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~ 88 (226)
T 3m33_A 27 RVLSGPDPELTFDLWLSRLL---------TPQTRVLEAGCGHGPDAARFGPQ---------AARWAAYDFSPELLKLARA 88 (226)
T ss_dssp CEESSSCTTHHHHHHHHHHC---------CTTCEEEEESCTTSHHHHHHGGG---------SSEEEEEESCHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHhcC---------CCCCeEEEeCCCCCHHHHHHHHc---------CCEEEEEECCHHHHHHHHH
Confidence 34555777666655544321 22359999999999988777542 2379999999998777665
Q ss_pred h
Q 011546 210 N 210 (483)
Q Consensus 210 ~ 210 (483)
+
T Consensus 89 ~ 89 (226)
T 3m33_A 89 N 89 (226)
T ss_dssp H
T ss_pred h
Confidence 5
No 104
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=93.16 E-value=0.079 Score=55.62 Aligned_cols=53 Identities=13% Similarity=0.129 Sum_probs=38.1
Q ss_pred HHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHH
Q 011546 148 WAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ 207 (483)
Q Consensus 148 ~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q 207 (483)
.+..+++.++....-+|+|+|||+|.++.-+.+.. + ..+++-||+|+.+.+.-
T Consensus 230 ~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~---g----~~~V~GVDis~~~l~~A 282 (433)
T 1u2z_A 230 FLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC---G----CALSFGCEIMDDASDLT 282 (433)
T ss_dssp HHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH---C----CSEEEEEECCHHHHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHC---C----CCEEEEEeCCHHHHHHH
Confidence 33444555565555699999999999998886643 1 23689999999986554
No 105
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=93.05 E-value=0.09 Score=53.43 Aligned_cols=62 Identities=19% Similarity=0.236 Sum_probs=39.5
Q ss_pred CCCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhH
Q 011546 126 GAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQ 204 (483)
Q Consensus 126 G~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr 204 (483)
...|.|+|++++....-+ .. ..+...+|+|+|||+|.++..+++... ...+++-||++|.+.
T Consensus 16 ~~~g~~~TP~~l~~~~~~--------~~---~~~~~~~vLD~gcGtG~~~~~~~~~~~------~~~~i~gvDi~~~~~ 77 (421)
T 2ih2_A 16 RSLGRVETPPEVVDFMVS--------LA---EAPRGGRVLEPACAHGPFLRAFREAHG------TAYRFVGVEIDPKAL 77 (421)
T ss_dssp -----CCCCHHHHHHHHH--------HC---CCCTTCEEEEETCTTCHHHHHHHHHHC------SCSEEEEEESCTTTC
T ss_pred ccCceEeCCHHHHHHHHH--------hh---ccCCCCEEEECCCCChHHHHHHHHHhC------CCCeEEEEECCHHHH
Confidence 457899998776544322 21 222335999999999999988876541 124789999999763
No 106
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=93.04 E-value=0.23 Score=49.01 Aligned_cols=61 Identities=18% Similarity=0.379 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 140 MFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 140 ~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+-++++...+ ...+.+.+|+|+|||.|.++..+++. . ...+++.||+||.+.+..++++.
T Consensus 80 ~y~e~l~~~~l-----~~~~~~~~VLdiG~G~G~~~~~l~~~---~----~~~~v~~vDid~~~i~~a~~~~~ 140 (304)
T 3bwc_A 80 VYHEVLGHTSL-----CSHPKPERVLIIGGGDGGVLREVLRH---G----TVEHCDLVDIDGEVMEQSKQHFP 140 (304)
T ss_dssp HHHHHHHHHHH-----TTSSSCCEEEEEECTTSHHHHHHHTC---T----TCCEEEEEESCHHHHHHHHHHCH
T ss_pred HHHHHHhhhhh-----hcCCCCCeEEEEcCCCCHHHHHHHhC---C----CCCEEEEEECCHHHHHHHHHHhH
Confidence 45566554322 22344569999999999998888642 1 22489999999999998888773
No 107
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=93.01 E-value=0.22 Score=48.21 Aligned_cols=47 Identities=23% Similarity=0.181 Sum_probs=37.0
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
...+|+|+|||+|.++..+++.+. ...+++-||+|+.+.+.-++++.
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~------~~~~v~gvD~s~~~~~~a~~~~~ 82 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELK------PFEQIIGSDLSATMIKTAEVIKE 82 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSS------CCSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHhCC------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 346999999999999999876431 23479999999998877777664
No 108
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=92.97 E-value=0.13 Score=45.48 Aligned_cols=45 Identities=20% Similarity=0.189 Sum_probs=35.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
.-+|+|+|||+|.++..+++. + ..+++-||+|+.+.+.-++++..
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~----~----~~~v~~vD~~~~~~~~a~~~~~~ 76 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSR----G----MSAAVLVEKNRKAQAIIQDNIIM 76 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHT----T----CCEEEEECCCHHHHHHHHHHHHT
T ss_pred CCeEEEeCCCCCHHHHHHHHc----C----CCEEEEEECCHHHHHHHHHHHHH
Confidence 359999999999998877642 1 23799999999998887777643
No 109
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=92.93 E-value=0.2 Score=46.57 Aligned_cols=44 Identities=16% Similarity=0.220 Sum_probs=36.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+|+|||.|.++..+++.+ | ..+++.||+|+.+.+.-++++.
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~---~----~~~v~~vD~~~~~~~~a~~~~~ 99 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQAL---P----EATIVSIERDERRYEEAHKHVK 99 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHC---T----TCEEEEECCCHHHHHHHHHHHH
T ss_pred CEEEEecCCCcHHHHHHHHHC---C----CCEEEEEECCHHHHHHHHHHHH
Confidence 489999999999998887643 2 2489999999999888777764
No 110
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=92.89 E-value=0.16 Score=44.91 Aligned_cols=44 Identities=16% Similarity=0.072 Sum_probs=34.3
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.-+|+|+|||+|.++..+++ .+ ..+++-||+|+.+.+.-++++.
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~----~~----~~~v~~vD~~~~~~~~a~~~~~ 88 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVS----RG----MDKSICIEKNFAALKVIKENIA 88 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHH----TT----CSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEeCCccCHHHHHHHH----cC----CCEEEEEECCHHHHHHHHHHHH
Confidence 35999999999999887654 11 2379999999998887776664
No 111
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=92.80 E-value=0.23 Score=48.40 Aligned_cols=61 Identities=20% Similarity=0.345 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 140 MFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 140 ~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.|-|+++...+.. .|.+.+|+++|+|+|.++..+++. . ...+++.||++|.+.+.-++.+.
T Consensus 60 ~y~e~l~~~~l~~-----~~~~~~VLdiG~G~G~~~~~l~~~---~----~~~~v~~vEid~~~v~~ar~~~~ 120 (275)
T 1iy9_A 60 VYHEMVAHVPLFT-----HPNPEHVLVVGGGDGGVIREILKH---P----SVKKATLVDIDGKVIEYSKKFLP 120 (275)
T ss_dssp HHHHHHHHHHHHH-----SSSCCEEEEESCTTCHHHHHHTTC---T----TCSEEEEEESCHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHhh-----CCCCCEEEEECCchHHHHHHHHhC---C----CCceEEEEECCHHHHHHHHHHhH
Confidence 4667776542211 245569999999999998877542 1 23489999999999888887774
No 112
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=92.79 E-value=0.32 Score=45.61 Aligned_cols=46 Identities=11% Similarity=0.227 Sum_probs=37.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
-+|+|+|||+|..+.-+++.+. ...+++.||+|+.+.+.-++++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~------~~~~v~~vD~~~~~~~~a~~~~~~ 103 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLA------DNTTLTCIDPESEHQRQAKALFRE 103 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSC------TTSEEEEECSCHHHHHHHHHHHHH
T ss_pred CCEEEEcCCchHHHHHHHHhCC------CCCEEEEEECCHHHHHHHHHHHHH
Confidence 3899999999999998877542 124799999999998887777753
No 113
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=92.78 E-value=0.25 Score=47.42 Aligned_cols=69 Identities=20% Similarity=0.309 Sum_probs=46.0
Q ss_pred CCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHH
Q 011546 128 EGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ 207 (483)
Q Consensus 128 ~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q 207 (483)
.+-|+.-|+. +.+..++++.. . ....+|+|+|||+|.++..++... | ..+++.||+|+.+.+.-
T Consensus 86 ~~~~ipr~~t-----e~l~~~~l~~~---~-~~~~~vLDlG~GsG~~~~~la~~~---~----~~~v~~vD~s~~~l~~a 149 (276)
T 2b3t_A 86 PATLIPRPDT-----ECLVEQALARL---P-EQPCRILDLGTGTGAIALALASER---P----DCEIIAVDRMPDAVSLA 149 (276)
T ss_dssp TTSCCCCTTH-----HHHHHHHHHHS---C-SSCCEEEEETCTTSHHHHHHHHHC---T----TSEEEEECSSHHHHHHH
T ss_pred CCCcccCchH-----HHHHHHHHHhc---c-cCCCEEEEecCCccHHHHHHHHhC---C----CCEEEEEECCHHHHHHH
Confidence 4556665653 33344444432 2 223599999999999988876532 2 24799999999987776
Q ss_pred HHhcc
Q 011546 208 HHNLK 212 (483)
Q Consensus 208 ~~~L~ 212 (483)
++++.
T Consensus 150 ~~n~~ 154 (276)
T 2b3t_A 150 QRNAQ 154 (276)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 114
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=92.78 E-value=0.26 Score=48.71 Aligned_cols=62 Identities=18% Similarity=0.318 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 139 ~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-.|-|+++...+. ..|.+-+|+++|+|+|.++..+++. + ...+++.||+||.+.+.-++.+.
T Consensus 67 ~~Y~e~l~~~~l~-----~~~~~~~VLdiG~G~G~~~~~l~~~----~---~~~~V~~VDid~~vi~~ar~~~~ 128 (294)
T 3adn_A 67 FIYHEMMTHVPLL-----AHGHAKHVLIIGGGDGAMLREVTRH----K---NVESITMVEIDAGVVSFCRQYLP 128 (294)
T ss_dssp HHHHHHHHHHHHH-----HSTTCCEEEEESCTTCHHHHHHHTC----T---TCCEEEEECSCTTHHHHHHHHCH
T ss_pred hHHHHHHHHHHHh-----cCCCCCEEEEEeCChhHHHHHHHhC----C---CCCEEEEEECCHHHHHHHHHhhh
Confidence 3567777654332 1244569999999999999888752 1 22379999999999998888775
No 115
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=92.76 E-value=0.18 Score=46.00 Aligned_cols=43 Identities=19% Similarity=0.075 Sum_probs=33.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+|+|+|||+|.++.-+.+. .+ +++.||+||.+.+.-++++.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~---~~------~v~~vD~s~~~~~~a~~~~~ 81 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDY---GF------EVVGVDISEDMIRKAREYAK 81 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHT---TC------EEEEEESCHHHHHHHHHHHH
T ss_pred CCeEEEEeccCCHHHHHHHHc---CC------EEEEEECCHHHHHHHHHHHH
Confidence 469999999999988665432 11 79999999998887776664
No 116
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=92.66 E-value=0.25 Score=44.83 Aligned_cols=43 Identities=16% Similarity=0.273 Sum_probs=33.5
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
...+|+|+|||+|.++..+++. + .+++.||+|+.+.+.-++++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~----~-----~~~~~~D~~~~~~~~~~~~~ 74 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN----G-----TRVSGIEAFPEAAEQAKEKL 74 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT----T-----CEEEEEESSHHHHHHHHTTS
T ss_pred CCCcEEEeCCCCCHHHHHHHhc----C-----CeEEEEeCCHHHHHHHHHhC
Confidence 3469999999999988876532 1 47999999999877766554
No 117
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=92.65 E-value=0.24 Score=45.65 Aligned_cols=45 Identities=13% Similarity=0.065 Sum_probs=36.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+|+|||+|.++..+++.+ | ...+++.||+|+.+.+.-++++.
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~---~---~~~~v~~vD~~~~~~~~a~~~~~ 115 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALAL---P---ADGRVVTCEVDAQPPELGRPLWR 115 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTS---C---TTCEEEEEESCSHHHHHHHHHHH
T ss_pred CEEEEEcCCccHHHHHHHHhC---C---CCCEEEEEECCHHHHHHHHHHHH
Confidence 489999999999988876532 2 13489999999999888887775
No 118
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=92.62 E-value=0.26 Score=52.88 Aligned_cols=75 Identities=12% Similarity=0.135 Sum_probs=51.6
Q ss_pred CCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcC-cCcc----------ccceEE
Q 011546 127 AEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKF-KNFT----------ESLHIH 195 (483)
Q Consensus 127 ~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~-p~~~----------~~l~y~ 195 (483)
+.|.|||+.+|..+.-+++ ......+|++.+||+|.|...+.+.++.. ++.. ...+++
T Consensus 147 ~~G~fyTP~~iv~~mv~~l-----------~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~ 215 (541)
T 2ar0_A 147 GAGQYFTPRPLIKTIIHLL-----------KPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFI 215 (541)
T ss_dssp ---CCCCCHHHHHHHHHHH-----------CCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEE
T ss_pred cCCeeeCCHHHHHHHHHHh-----------ccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEE
Confidence 4699999999876644333 11123589999999999999999888642 2210 123789
Q ss_pred EEecChhhHHHHHHhcc
Q 011546 196 LVECSPTLQKLQHHNLK 212 (483)
Q Consensus 196 iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|++|...+.-+.+|.
T Consensus 216 GiEid~~~~~lA~~nl~ 232 (541)
T 2ar0_A 216 GLELVPGTRRLALMNCL 232 (541)
T ss_dssp EEESCHHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHH
Confidence 99999999887776653
No 119
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=92.61 E-value=0.4 Score=47.12 Aligned_cols=71 Identities=17% Similarity=0.195 Sum_probs=46.0
Q ss_pred CCCChhHHHHHHH--HHHH-HHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHH
Q 011546 133 TSPEVSQMFGEMV--GVWA-MCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHH 209 (483)
Q Consensus 133 TSpeIs~~FGe~I--a~~i-~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~ 209 (483)
..|+....|.+.+ ...+ ..+....+.+. .+|+|+|||+|.++..+++. +| .++++.+|+ |.+.+.-++
T Consensus 138 ~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~---~p----~~~~~~~D~-~~~~~~a~~ 208 (334)
T 2ip2_A 138 RCPDAGRRFLLAMKASNLAFHEIPRLLDFRG-RSFVDVGGGSGELTKAILQA---EP----SARGVMLDR-EGSLGVARD 208 (334)
T ss_dssp HCHHHHHHHHHHHGGGHHHHHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHH---CT----TCEEEEEEC-TTCTHHHHH
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHH---CC----CCEEEEeCc-HHHHHHHHH
Confidence 3566666666655 1112 22333444444 79999999999999888764 33 247999999 777666555
Q ss_pred hcc
Q 011546 210 NLK 212 (483)
Q Consensus 210 ~L~ 212 (483)
++.
T Consensus 209 ~~~ 211 (334)
T 2ip2_A 209 NLS 211 (334)
T ss_dssp HTH
T ss_pred HHh
Confidence 553
No 120
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=92.59 E-value=0.31 Score=44.75 Aligned_cols=45 Identities=7% Similarity=0.054 Sum_probs=35.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+|+|+|||+|..+..+++.+ | ...+++.||+|+.+.+.-++++.
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~---~---~~~~v~~vD~~~~~~~~a~~~~~ 110 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLAL---P---KDGTLITCDVDEKSTALAKEYWE 110 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTC---C---TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEeCCcchHHHHHHHHhC---C---CCCEEEEEeCCHHHHHHHHHHHH
Confidence 489999999999988876532 2 23589999999998887777764
No 121
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=92.58 E-value=0.2 Score=52.61 Aligned_cols=66 Identities=17% Similarity=0.192 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHh
Q 011546 138 SQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN 210 (483)
Q Consensus 138 s~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~ 210 (483)
+.+|||+.-..+..++..++....-+|+++|||+|.++..+... .+ .-+++-||+|+.+.+.-++.
T Consensus 151 ~~vYGEt~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~---~g----~~kVvGIDiS~~~lelAr~n 216 (438)
T 3uwp_A 151 PEVYGETSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAA---TN----CKHHYGVEKADIPAKYAETM 216 (438)
T ss_dssp GGGGGGTHHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHH---CC----CSEEEEEECCHHHHHHHHHH
T ss_pred CcccCCCCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHH---CC----CCEEEEEeCCHHHHHHHHHH
Confidence 46789988888888888887665679999999999988777542 22 12589999999876665543
No 122
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=92.49 E-value=0.3 Score=45.81 Aligned_cols=51 Identities=25% Similarity=0.225 Sum_probs=39.3
Q ss_pred cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
++....-+|+|+|||+|.++..+++.+. ...+++.||+||.+.+.-++++.
T Consensus 89 ~~~~~~~~vldiG~G~G~~~~~l~~~~~------~~~~v~~~D~~~~~~~~a~~~~~ 139 (255)
T 3mb5_A 89 AGISPGDFIVEAGVGSGALTLFLANIVG------PEGRVVSYEIREDFAKLAWENIK 139 (255)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHC------TTSEEEEECSCHHHHHHHHHHHH
T ss_pred hCCCCCCEEEEecCCchHHHHHHHHHhC------CCeEEEEEecCHHHHHHHHHHHH
Confidence 4444446999999999999999887542 23479999999998887777764
No 123
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=92.48 E-value=0.17 Score=47.27 Aligned_cols=44 Identities=11% Similarity=0.110 Sum_probs=33.5
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+|+|+|||+|.++..+.+ .+ ..+++-||+|+.+.+.-+++..
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~----~~----~~~v~gvD~s~~~l~~a~~~~~ 104 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQE----AP----IDEHWIIECNDGVFQRLRDWAP 104 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHT----SC----EEEEEEEECCHHHHHHHHHHGG
T ss_pred CCeEEEEeccCCHHHHHHHh----cC----CCeEEEEcCCHHHHHHHHHHHH
Confidence 36999999999998877632 11 1278999999999877776654
No 124
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=92.48 E-value=0.37 Score=45.55 Aligned_cols=44 Identities=11% Similarity=0.179 Sum_probs=34.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
..+|+|+|||+|.++..+++.+ | ..+++.||+|+.+.+.-+++.
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~---~----~~~v~~vD~s~~~~~~a~~~~ 129 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADAL---P----EITTFGLDVSKVAIKAAAKRY 129 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTC---T----TSEEEEEESCHHHHHHHHHHC
T ss_pred CCEEEEECCCCCHHHHHHHHhC---C----CCeEEEEeCCHHHHHHHHHhC
Confidence 3599999999999999886632 2 237999999999877766554
No 125
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=92.47 E-value=0.38 Score=43.86 Aligned_cols=45 Identities=16% Similarity=0.071 Sum_probs=35.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+|+|+|||+|..+..+++.+ | ...+++.||+|+.+.+.-++++.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~---~---~~~~v~~vD~~~~~~~~a~~~~~ 102 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAI---S---ISSRVVMIDPDRDNVEHARRMLH 102 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTS---C---TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEEcCCccHHHHHHHHhC---C---CCCEEEEEECCHHHHHHHHHHHH
Confidence 489999999999988876532 2 13489999999999888777764
No 126
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=92.47 E-value=0.24 Score=47.45 Aligned_cols=54 Identities=17% Similarity=0.260 Sum_probs=38.8
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 146 GVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 146 a~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
..++.+.+... ...+|+|+|||+|.++..+++. ..+++-||+|+.+.+.-++++
T Consensus 46 ~~~l~~~l~~~---~~~~vLDiGcG~G~~~~~l~~~---------~~~v~gvD~s~~~l~~a~~~~ 99 (293)
T 3thr_A 46 KAWLLGLLRQH---GCHRVLDVACGTGVDSIMLVEE---------GFSVTSVDASDKMLKYALKER 99 (293)
T ss_dssp HHHHHHHHHHT---TCCEEEETTCTTSHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHhccc---CCCEEEEecCCCCHHHHHHHHC---------CCeEEEEECCHHHHHHHHHhh
Confidence 34555555433 2359999999999998887653 127999999999877766554
No 127
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=92.45 E-value=0.36 Score=44.35 Aligned_cols=45 Identities=22% Similarity=0.273 Sum_probs=35.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+|+|+|||+|.++..+++.+ | ...+++-||+|+.+.+.-++++.
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~---~---~~~~v~~vD~~~~~~~~a~~~~~ 104 (223)
T 3duw_A 60 RNILEIGTLGGYSTIWLARGL---S---SGGRVVTLEASEKHADIARSNIE 104 (223)
T ss_dssp SEEEEECCTTSHHHHHHHTTC---C---SSCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEecCCccHHHHHHHHhC---C---CCCEEEEEECCHHHHHHHHHHHH
Confidence 499999999999988876532 2 13489999999998877776664
No 128
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=92.44 E-value=0.31 Score=46.00 Aligned_cols=45 Identities=9% Similarity=0.048 Sum_probs=37.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+|+|||+|..+.-+++.+ | ...+++.||+||.+.+.-++++.
T Consensus 72 ~~VLeiG~G~G~~~~~la~~~---~---~~~~v~~iD~~~~~~~~a~~~~~ 116 (237)
T 3c3y_A 72 KKTIEVGVFTGYSLLLTALSI---P---DDGKITAIDFDREAYEIGLPFIR 116 (237)
T ss_dssp CEEEEECCTTSHHHHHHHHHS---C---TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCCHHHHHHHHhC---C---CCCEEEEEECCHHHHHHHHHHHH
Confidence 489999999999998887754 2 12489999999999888887775
No 129
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=92.42 E-value=0.31 Score=46.49 Aligned_cols=45 Identities=18% Similarity=0.096 Sum_probs=36.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+|+|||+|..+.-+++.+ | ...+++.||+|+.+.+.-++++.
T Consensus 81 ~~VLeiG~G~G~~~~~la~~~---~---~~~~v~~iD~s~~~~~~a~~~~~ 125 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALAI---P---EDGKILAMDINKENYELGLPVIK 125 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHHS---C---TTCEEEEEESCCHHHHHHHHHHH
T ss_pred CEEEEeCCCcCHHHHHHHHhC---C---CCCEEEEEECCHHHHHHHHHHHH
Confidence 489999999999998887754 2 12489999999999888887775
No 130
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=92.42 E-value=0.19 Score=47.44 Aligned_cols=46 Identities=9% Similarity=0.058 Sum_probs=37.1
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
+-+|+|+|||.|.+|.-+.. ..| ..+|+-+++|+.+-+.=++++..
T Consensus 50 ~~~VLDlGCG~GplAl~l~~---~~p----~a~~~A~Di~~~~leiar~~~~~ 95 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWN---ENE----KIIYHAYDIDRAEIAFLSSIIGK 95 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHC---SSC----CCEEEEECSCHHHHHHHHHHHHH
T ss_pred CCeEEEecCCCCHHHHHHHh---cCC----CCEEEEEeCCHHHHHHHHHHHHh
Confidence 45999999999999987743 122 33899999999999998888753
No 131
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=92.41 E-value=0.14 Score=46.51 Aligned_cols=41 Identities=22% Similarity=0.266 Sum_probs=31.9
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHh
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN 210 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~ 210 (483)
+.+|+|+|||+|.++..+++. ..+++-||+|+.+.+.-+++
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~ 93 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADR---------GIEAVGVDGDRTLVDAARAA 93 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTT---------TCEEEEEESCHHHHHHHHHT
T ss_pred CCEEEEeCCCCCHHHHHHHHC---------CCEEEEEcCCHHHHHHHHHh
Confidence 369999999999988776542 23799999999887665554
No 132
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=92.40 E-value=0.29 Score=49.97 Aligned_cols=45 Identities=24% Similarity=0.330 Sum_probs=36.1
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.-+|+|+|||+|.++.-+.+. .| ..+++.||+|+.+.+.-++++.
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~---~p----~~~V~gvD~s~~al~~Ar~n~~ 267 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDK---NP----QAKVVFVDESPMAVASSRLNVE 267 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHH---CT----TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCeEEEEeCcchHHHHHHHHH---CC----CCEEEEEECcHHHHHHHHHHHH
Confidence 369999999999999888654 22 2479999999999887777664
No 133
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=92.39 E-value=0.56 Score=46.18 Aligned_cols=50 Identities=24% Similarity=0.315 Sum_probs=37.7
Q ss_pred CCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 157 g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+....-+|+|+|||.|.++..+.+... ...+++-||+|+.+.+.-++++.
T Consensus 72 ~~~~~~~VLDiGcG~G~~~~~la~~~~------~~~~v~gvD~s~~~~~~a~~~~~ 121 (317)
T 1dl5_A 72 GLDKGMRVLEIGGGTGYNAAVMSRVVG------EKGLVVSVEYSRKICEIAKRNVE 121 (317)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHC------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCcCEEEEecCCchHHHHHHHHhcC------CCCEEEEEECCHHHHHHHHHHHH
Confidence 333345999999999999988876432 12479999999999888777664
No 134
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=92.38 E-value=0.27 Score=48.71 Aligned_cols=63 Identities=14% Similarity=0.261 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 138 SQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 138 s~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
...|-++++... ....+.+-+|+|+|||+|.++..+++. . ...+++.||+||.+.+.-++++.
T Consensus 78 e~~y~e~l~~~~-----l~~~~~~~~VLdiG~G~G~~~~~l~~~---~----~~~~v~~vDid~~~i~~ar~~~~ 140 (304)
T 2o07_A 78 EFSYQEMIANLP-----LCSHPNPRKVLIIGGGDGGVLREVVKH---P----SVESVVQCEIDEDVIQVSKKFLP 140 (304)
T ss_dssp HHHHHHHHHHHH-----HTTSSSCCEEEEEECTTSHHHHHHTTC---T----TCCEEEEEESCHHHHHHHHHHCH
T ss_pred chHHHHHHHHHH-----HhhCCCCCEEEEECCCchHHHHHHHHc---C----CCCEEEEEECCHHHHHHHHHHhH
Confidence 456667665321 122344569999999999998877642 1 22489999999999988887764
No 135
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=92.32 E-value=0.28 Score=47.82 Aligned_cols=49 Identities=18% Similarity=0.278 Sum_probs=38.6
Q ss_pred CCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 158 QPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 158 ~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
.|.+-+|+|+|||.|.++..+++. . ...+++.||+||.+.+.-++.+..
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~---~----~~~~v~~vDid~~~i~~a~~~~~~ 124 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKY---K----SVENIDICEIDETVIEVSKIYFKN 124 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTC---T----TCCEEEEEESCHHHHHHHHHHCTT
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHc---C----CCCEEEEEECCHHHHHHHHHHhHH
Confidence 445569999999999998887642 1 234899999999999988887753
No 136
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=92.26 E-value=0.38 Score=44.99 Aligned_cols=45 Identities=16% Similarity=0.132 Sum_probs=36.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+|+|+|||+|.++..+++.+ | ...+++.||+||.+.+.-++++.
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~---~---~~~~v~~vD~~~~~~~~a~~~~~ 106 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASAL---P---EDGKILCCDVSEEWTNVARKYWK 106 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHS---C---TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCHHHHHHHHhC---C---CCCEEEEEECCHHHHHHHHHHHH
Confidence 489999999999999887653 2 13489999999999888777764
No 137
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=92.24 E-value=0.26 Score=45.37 Aligned_cols=47 Identities=13% Similarity=0.120 Sum_probs=36.2
Q ss_pred CCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 157 g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+....-+|+|+|||+|.++..+.+. ..+++-||+|+.+.+.-++++.
T Consensus 52 ~~~~~~~vLDlGcG~G~~~~~la~~---------~~~v~~vD~s~~~~~~a~~~~~ 98 (204)
T 3njr_A 52 APRRGELLWDIGGGSGSVSVEWCLA---------GGRAITIEPRADRIENIQKNID 98 (204)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHc---------CCEEEEEeCCHHHHHHHHHHHH
Confidence 4444469999999999998877652 2378999999998877666654
No 138
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=92.20 E-value=0.35 Score=45.20 Aligned_cols=45 Identities=20% Similarity=0.314 Sum_probs=35.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
.+|+|+|||+|.++..+++. .| ..+++.||+|+.+.+.-++++..
T Consensus 73 ~~vLDiG~G~G~~~~~la~~---~~----~~~v~~vD~~~~~~~~a~~~~~~ 117 (232)
T 3ntv_A 73 KNILEIGTAIGYSSMQFASI---SD----DIHVTTIERNETMIQYAKQNLAT 117 (232)
T ss_dssp CEEEEECCSSSHHHHHHHTT---CT----TCEEEEEECCHHHHHHHHHHHHH
T ss_pred CEEEEEeCchhHHHHHHHHh---CC----CCEEEEEECCHHHHHHHHHHHHH
Confidence 49999999999998887642 22 34899999999998887777753
No 139
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=92.16 E-value=0.29 Score=48.18 Aligned_cols=61 Identities=25% Similarity=0.355 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 140 MFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 140 ~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.|-|+++...+.. .|.+.+|+|+|||+|.++..+++. . ...+++.||+||.+.+.-++.+.
T Consensus 75 ~y~e~l~~~~l~~-----~~~~~~VLdiG~G~G~~~~~l~~~---~----~~~~v~~vDid~~~~~~a~~~~~ 135 (296)
T 1inl_A 75 MYHEMLAHVPMFL-----HPNPKKVLIIGGGDGGTLREVLKH---D----SVEKAILCEVDGLVIEAARKYLK 135 (296)
T ss_dssp HHHHHHHHHHHHH-----SSSCCEEEEEECTTCHHHHHHTTS---T----TCSEEEEEESCHHHHHHHHHHCH
T ss_pred HHHHHHhHHHHhc-----CCCCCEEEEEcCCcCHHHHHHHhc---C----CCCEEEEEECCHHHHHHHHHHhH
Confidence 4667776432211 234469999999999998887642 1 23489999999999888887763
No 140
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=92.16 E-value=0.3 Score=46.47 Aligned_cols=51 Identities=20% Similarity=0.215 Sum_probs=39.0
Q ss_pred cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
++.....+|+|+|||+|.++..+++.+. ...+++.||+|+.+.+.-++++.
T Consensus 95 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~------~~~~v~~vD~~~~~~~~a~~~~~ 145 (280)
T 1i9g_A 95 GDIFPGARVLEAGAGSGALTLSLLRAVG------PAGQVISYEQRADHAEHARRNVS 145 (280)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHC------TTSEEEEECSCHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEEcccccHHHHHHHHHhC------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 3443345999999999999998887542 12379999999999888777764
No 141
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=92.10 E-value=0.47 Score=41.04 Aligned_cols=42 Identities=19% Similarity=0.185 Sum_probs=33.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+|+|||+|.++..+++. .+ +++-||+|+.+.+.-++++.
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~---~~------~v~~vD~~~~~~~~a~~~~~ 84 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASE---GW------EAVLVEKDPEAVRLLKENVR 84 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHT---TC------EEEEECCCHHHHHHHHHHHH
T ss_pred CeEEEeCCCcCHHHHHHHHC---CC------eEEEEeCCHHHHHHHHHHHH
Confidence 48999999999988777542 11 38999999999888777664
No 142
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=92.09 E-value=0.49 Score=48.49 Aligned_cols=42 Identities=24% Similarity=0.242 Sum_probs=34.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+|+|+|||+|.++.-+++. ..+++.||+|+.+.+.-++++.
T Consensus 235 ~~VLDlGcG~G~~~~~la~~---------g~~V~gvDis~~al~~A~~n~~ 276 (381)
T 3dmg_A 235 RQVLDLGAGYGALTLPLARM---------GAEVVGVEDDLASVLSLQKGLE 276 (381)
T ss_dssp CEEEEETCTTSTTHHHHHHT---------TCEEEEEESBHHHHHHHHHHHH
T ss_pred CEEEEEeeeCCHHHHHHHHc---------CCEEEEEECCHHHHHHHHHHHH
Confidence 59999999999999888652 1379999999998888777764
No 143
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=92.08 E-value=0.19 Score=46.63 Aligned_cols=44 Identities=14% Similarity=0.258 Sum_probs=33.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-.|+|+|||+|.++..+.+. .|+ .+++-||+|+.+.+.-++++.
T Consensus 40 ~~vLDiGcG~G~~~~~la~~---~p~----~~v~giD~s~~~l~~a~~~~~ 83 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQ---NPD----INYIGIELFKSVIVTAVQKVK 83 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHH---CTT----SEEEEECSCHHHHHHHHHHHH
T ss_pred ceEEEEecCCCHHHHHHHHH---CCC----CCEEEEEechHHHHHHHHHHH
Confidence 48999999999998877543 332 479999999998777666553
No 144
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=92.00 E-value=0.36 Score=45.11 Aligned_cols=51 Identities=22% Similarity=0.295 Sum_probs=39.0
Q ss_pred cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
++....-+|+|+|||+|.++..+++.+. ...+++.||+|+.+.+.-++++.
T Consensus 92 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~------~~~~v~~~D~~~~~~~~a~~~~~ 142 (258)
T 2pwy_A 92 LDLAPGMRVLEAGTGSGGLTLFLARAVG------EKGLVESYEARPHHLAQAERNVR 142 (258)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHC------TTSEEEEEESCHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCcCHHHHHHHHHhC------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 3443445999999999999998877542 12379999999999888777764
No 145
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=91.96 E-value=0.58 Score=45.67 Aligned_cols=69 Identities=17% Similarity=0.339 Sum_probs=46.3
Q ss_pred CCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHH
Q 011546 128 EGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ 207 (483)
Q Consensus 128 ~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q 207 (483)
.|-|+.-|+...+. .++++..... ...+|+|+|||+|.++..+... | ..+++-||+|+...+.-
T Consensus 99 ~~~lipr~~te~lv-----~~~l~~~~~~---~~~~vLDlG~GsG~~~~~la~~----~----~~~v~~vDis~~al~~A 162 (284)
T 1nv8_A 99 EGVFVPRPETEELV-----ELALELIRKY---GIKTVADIGTGSGAIGVSVAKF----S----DAIVFATDVSSKAVEIA 162 (284)
T ss_dssp TTSCCCCTTHHHHH-----HHHHHHHHHH---TCCEEEEESCTTSHHHHHHHHH----S----SCEEEEEESCHHHHHHH
T ss_pred CCceecChhHHHHH-----HHHHHHhccc---CCCEEEEEeCchhHHHHHHHHC----C----CCEEEEEECCHHHHHHH
Confidence 45677667654433 3333333211 1248999999999999888653 2 24799999999988877
Q ss_pred HHhcc
Q 011546 208 HHNLK 212 (483)
Q Consensus 208 ~~~L~ 212 (483)
++++.
T Consensus 163 ~~n~~ 167 (284)
T 1nv8_A 163 RKNAE 167 (284)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77664
No 146
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=91.93 E-value=0.24 Score=45.36 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=31.2
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHH
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL 206 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~ 206 (483)
...+|+|+|||+|.++..+.+. .| ..+++-||+|+.+-+.
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~---~p----~~~v~gvD~s~~~l~~ 66 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQ---NP----SRLVVALDADKSRMEK 66 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHH---CT----TEEEEEEESCGGGGHH
T ss_pred CCCEEEEecCCCCHHHHHHHHH---CC----CCEEEEEECCHHHHHH
Confidence 3469999999999999888653 22 3479999999995553
No 147
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=91.92 E-value=0.21 Score=45.91 Aligned_cols=44 Identities=11% Similarity=0.246 Sum_probs=34.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-.|+|+|||+|.++..+.+. .| ..+++-||+|+.+.+.-++++.
T Consensus 43 ~~vLDiGcG~G~~~~~la~~---~p----~~~v~gvD~s~~~l~~a~~~~~ 86 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQ---NP----DINYIGIDIQKSVLSYALDKVL 86 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHH---CT----TSEEEEEESCHHHHHHHHHHHH
T ss_pred CeEEEEccCcCHHHHHHHHH---CC----CCCEEEEEcCHHHHHHHHHHHH
Confidence 48999999999998887653 23 2479999999998777666654
No 148
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=91.92 E-value=0.23 Score=48.92 Aligned_cols=67 Identities=13% Similarity=0.177 Sum_probs=44.0
Q ss_pred CCCCCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhh
Q 011546 124 VFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (483)
Q Consensus 124 ~~G~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (483)
.+|. .|.+.+++. .++++. .+....-+|+|+|||+|.++..+++. ..+++-||+|+.+
T Consensus 19 ~~Gq--~fl~~~~i~--------~~i~~~---~~~~~~~~VLDiG~G~G~lt~~La~~---------~~~v~~vDi~~~~ 76 (299)
T 2h1r_A 19 FQGQ--HLLKNPGIL--------DKIIYA---AKIKSSDIVLEIGCGTGNLTVKLLPL---------AKKVITIDIDSRM 76 (299)
T ss_dssp ------CEECCHHHH--------HHHHHH---HCCCTTCEEEEECCTTSTTHHHHTTT---------SSEEEEECSCHHH
T ss_pred cccc--ceecCHHHH--------HHHHHh---cCCCCcCEEEEEcCcCcHHHHHHHhc---------CCEEEEEECCHHH
Confidence 4664 688877653 233332 23333458999999999999877542 1378999999999
Q ss_pred HHHHHHhcc
Q 011546 204 QKLQHHNLK 212 (483)
Q Consensus 204 r~~Q~~~L~ 212 (483)
.+.-++++.
T Consensus 77 ~~~a~~~~~ 85 (299)
T 2h1r_A 77 ISEVKKRCL 85 (299)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 887776663
No 149
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=91.89 E-value=0.4 Score=45.44 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=35.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+|+|+|||+|..+..+++.+ | ...+++.||+|+.+.+.-++++.
T Consensus 65 ~~VLdiG~G~G~~~~~la~~~---~---~~~~v~~vD~s~~~~~~a~~~~~ 109 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIWMAREL---P---ADGQLLTLEADAHHAQVARENLQ 109 (248)
T ss_dssp SEEEEECCTTSHHHHHHHTTS---C---TTCEEEEEECCHHHHHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHhC---C---CCCEEEEEECCHHHHHHHHHHHH
Confidence 499999999999988876532 2 23589999999998888777764
No 150
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=91.82 E-value=0.35 Score=48.67 Aligned_cols=62 Identities=16% Similarity=0.283 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 139 ~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..|-|+++... ....+.+.+|+|+|||+|.++..+++. . ...+++.||+||.+.+.-++++.
T Consensus 104 ~~y~e~L~~l~-----l~~~~~~~~VLdIG~G~G~~a~~la~~---~----~~~~V~~VDis~~~l~~Ar~~~~ 165 (334)
T 1xj5_A 104 CAYQEMITHLP-----LCSIPNPKKVLVIGGGDGGVLREVARH---A----SIEQIDMCEIDKMVVDVSKQFFP 165 (334)
T ss_dssp HHHHHHHHHHH-----HTTSSCCCEEEEETCSSSHHHHHHTTC---T----TCCEEEEEESCHHHHHHHHHHCH
T ss_pred hHHHHHHHHHH-----HhhCCCCCEEEEECCCccHHHHHHHHc---C----CCCEEEEEECCHHHHHHHHHHHH
Confidence 34666665432 122344569999999999988877642 1 23489999999999988887774
No 151
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=91.80 E-value=0.38 Score=44.68 Aligned_cols=42 Identities=14% Similarity=0.150 Sum_probs=34.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+|+|||+|.++..+.+. ..+++-||+|+.+.+.-++++.
T Consensus 80 ~~vLD~gcG~G~~~~~la~~---------~~~v~~vD~s~~~~~~a~~~~~ 121 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALT---------GMRVIAIDIDPVKIALARNNAE 121 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEECccccCHHHHHHHHc---------CCEEEEEECCHHHHHHHHHHHH
Confidence 49999999999999888652 1478999999998887777664
No 152
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=91.78 E-value=0.19 Score=46.94 Aligned_cols=50 Identities=16% Similarity=0.152 Sum_probs=36.5
Q ss_pred cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
++....-+|+|+|||+|+++..+++.. + ..+++-||+|+.+.+.-+++..
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~---~----~~~v~gvD~s~~~~~~a~~~~~ 119 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIA---D----KGIVYAIEYAPRIMRELLDACA 119 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHT---T----TSEEEEEESCHHHHHHHHHHTT
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHc---C----CcEEEEEECCHHHHHHHHHHhh
Confidence 333344689999999999998887642 2 2378999999988766555543
No 153
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=91.78 E-value=0.26 Score=46.11 Aligned_cols=43 Identities=12% Similarity=0.054 Sum_probs=32.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
-.|+|+|||+|.++..+.+. .|+ ..++-||+|+.+-+.-++++
T Consensus 36 ~~vLDiGcG~G~~~~~lA~~---~p~----~~v~giD~s~~~l~~a~~~~ 78 (218)
T 3dxy_A 36 PVTLEIGFGMGASLVAMAKD---RPE----QDFLGIEVHSPGVGACLASA 78 (218)
T ss_dssp CEEEEESCTTCHHHHHHHHH---CTT----SEEEEECSCHHHHHHHHHHH
T ss_pred CeEEEEeeeChHHHHHHHHH---CCC----CeEEEEEecHHHHHHHHHHH
Confidence 48999999999988877543 332 37899999999876655554
No 154
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=91.77 E-value=0.52 Score=46.07 Aligned_cols=71 Identities=10% Similarity=0.160 Sum_probs=44.6
Q ss_pred CCCChhHHHHHHHHHH----HHHHHHHcCC--CCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHH
Q 011546 133 TSPEVSQMFGEMVGVW----AMCLWEQMGQ--PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL 206 (483)
Q Consensus 133 TSpeIs~~FGe~Ia~~----i~~~w~~~g~--p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~ 206 (483)
..|+....|...+..+ +..+.+.... +...+|+|+|||+|.++..+++.. | ..+++.+|+| .+.+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~---p----~~~~~~~D~~-~~~~~ 203 (335)
T 2r3s_A 132 PEHPVWVQFAKAMSPMMANPAQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHN---P----NAEIFGVDWA-SVLEV 203 (335)
T ss_dssp TTCTHHHHHHHHSGGGGHHHHHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHC---T----TCEEEEEECH-HHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhhHHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHC---C----CCeEEEEecH-HHHHH
Confidence 4455556665543221 1223334443 445799999999999988887642 3 3489999999 55555
Q ss_pred HHHhc
Q 011546 207 QHHNL 211 (483)
Q Consensus 207 Q~~~L 211 (483)
-++++
T Consensus 204 a~~~~ 208 (335)
T 2r3s_A 204 AKENA 208 (335)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 155
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=91.67 E-value=0.46 Score=44.94 Aligned_cols=42 Identities=19% Similarity=0.284 Sum_probs=33.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
..+|+|+|||+|.++..+.+. ..+++.||+|+.+.+.-+++.
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~---------~~~v~gvD~s~~~l~~a~~~~ 96 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQER---------GFEVVLVDPSKEMLEVAREKG 96 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTT---------TCEEEEEESCHHHHHHHHHHT
T ss_pred CCeEEEeCCCcCHHHHHHHHc---------CCeEEEEeCCHHHHHHHHhhc
Confidence 459999999999988876542 137999999999887766654
No 156
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=91.66 E-value=0.41 Score=45.91 Aligned_cols=51 Identities=24% Similarity=0.328 Sum_probs=38.8
Q ss_pred cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
++.....+|+|+|||+|.++..+++.+. ...+++.||+||...+.-++++.
T Consensus 108 ~~~~~~~~VLDiG~G~G~~~~~la~~~~------~~~~v~~vD~s~~~~~~a~~~~~ 158 (277)
T 1o54_A 108 LDVKEGDRIIDTGVGSGAMCAVLARAVG------SSGKVFAYEKREEFAKLAESNLT 158 (277)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHTT------TTCEEEEECCCHHHHHHHHHHHH
T ss_pred hCCCCCCEEEEECCcCCHHHHHHHHHhC------CCcEEEEEECCHHHHHHHHHHHH
Confidence 3443446999999999999998876531 12479999999998888777664
No 157
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=91.60 E-value=0.28 Score=46.58 Aligned_cols=40 Identities=23% Similarity=0.389 Sum_probs=30.6
Q ss_pred CCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHH
Q 011546 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQK 205 (483)
Q Consensus 157 g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~ 205 (483)
+.+...+|+|+|||+|.++..+.+ + ..+++-||+||.+.+
T Consensus 31 ~~~~~~~vLDiGcG~G~~~~~l~~-----~----~~~v~gvD~s~~~~~ 70 (261)
T 3ege_A 31 NLPKGSVIADIGAGTGGYSVALAN-----Q----GLFVYAVEPSIVMRQ 70 (261)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHT-----T----TCEEEEECSCHHHHH
T ss_pred CCCCCCEEEEEcCcccHHHHHHHh-----C----CCEEEEEeCCHHHHH
Confidence 344456999999999999988864 2 237999999996543
No 158
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=91.55 E-value=0.32 Score=52.12 Aligned_cols=75 Identities=20% Similarity=0.250 Sum_probs=55.4
Q ss_pred CCCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcC-cCc-----cccceEEEEec
Q 011546 126 GAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKF-KNF-----TESLHIHLVEC 199 (483)
Q Consensus 126 G~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~-p~~-----~~~l~y~iVE~ 199 (483)
|+.|-|||+.+|..+.-+++. .. ..-+|++-.||+|.|.....++++.. +.. .....++-+|+
T Consensus 194 g~~GqfyTP~~Vv~lmv~l~~----------p~-~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~ 262 (530)
T 3ufb_A 194 GDSGEFYTPRPVVRFMVEVMD----------PQ-LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEA 262 (530)
T ss_dssp SSCCCCCCCHHHHHHHHHHHC----------CC-TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECC
T ss_pred CcCceECCcHHHHHHHHHhhc----------cC-CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhc
Confidence 678999999999887655442 11 22489999999999999999988642 221 22357899999
Q ss_pred ChhhHHHHHHhc
Q 011546 200 SPTLQKLQHHNL 211 (483)
Q Consensus 200 Sp~Lr~~Q~~~L 211 (483)
.+....+-+-.|
T Consensus 263 ~~~~~~la~mNl 274 (530)
T 3ufb_A 263 KSLPYLLVQMNL 274 (530)
T ss_dssp SHHHHHHHHHHH
T ss_pred cHHHHHHHHHHH
Confidence 999877766554
No 159
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=91.51 E-value=0.43 Score=44.29 Aligned_cols=48 Identities=25% Similarity=0.354 Sum_probs=37.6
Q ss_pred cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+....-+|+|+|||.|.++..+++. ..+++.||+|+.+.+.-++++.
T Consensus 87 ~~~~~~~~vldiG~G~G~~~~~l~~~---------~~~v~~vD~~~~~~~~a~~~~~ 134 (248)
T 2yvl_A 87 LNLNKEKRVLEFGTGSGALLAVLSEV---------AGEVWTFEAVEEFYKTAQKNLK 134 (248)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHH---------SSEEEEECSCHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEeCCCccHHHHHHHHh---------CCEEEEEecCHHHHHHHHHHHH
Confidence 34333459999999999999988764 2379999999998888777664
No 160
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=91.39 E-value=0.22 Score=46.02 Aligned_cols=51 Identities=16% Similarity=0.072 Sum_probs=36.2
Q ss_pred cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
++....-+|+|+|||+|+++..+.+.+. ...+++-||+|+.+.+.-+++.+
T Consensus 69 ~~~~~~~~vLDlG~G~G~~~~~la~~~~------~~~~v~~vD~s~~~~~~~~~~~~ 119 (227)
T 1g8a_A 69 FPIKPGKSVLYLGIASGTTASHVSDIVG------WEGKIFGIEFSPRVLRELVPIVE 119 (227)
T ss_dssp CCCCTTCEEEEETTTSTTHHHHHHHHHC------TTSEEEEEESCHHHHHHHHHHHS
T ss_pred cCCCCCCEEEEEeccCCHHHHHHHHHhC------CCeEEEEEECCHHHHHHHHHHHh
Confidence 3333345999999999999988876541 11278999999987665555543
No 161
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=91.39 E-value=0.31 Score=48.30 Aligned_cols=62 Identities=16% Similarity=0.273 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 139 ~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-.|-++++...+ . ..|.+.+|+|+|||+|.++..+++. . ...+++.||+||.+.+.-++++.
T Consensus 61 ~~Y~e~l~~~~l--~---~~~~~~~VLdiG~G~G~~~~~l~~~---~----~~~~v~~vDid~~~i~~ar~~~~ 122 (314)
T 1uir_A 61 YIYHETLVHPAM--L---THPEPKRVLIVGGGEGATLREVLKH---P----TVEKAVMVDIDGELVEVAKRHMP 122 (314)
T ss_dssp HHHHHHHHHHHH--H---HSSCCCEEEEEECTTSHHHHHHTTS---T----TCCEEEEEESCHHHHHHHHHHCH
T ss_pred hHHHHHHHHHHH--h---cCCCCCeEEEEcCCcCHHHHHHHhc---C----CCCEEEEEECCHHHHHHHHHHhH
Confidence 345666664321 1 1244569999999999998887642 1 23489999999999888877764
No 162
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=91.37 E-value=0.22 Score=44.92 Aligned_cols=41 Identities=15% Similarity=0.079 Sum_probs=32.8
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 163 NLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 163 ~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-++++.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~~~ 72 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL---------GYEVTAVDQSSVGLAKAKQLAQ 72 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT---------TCEEEEECSSHHHHHHHHHHHH
T ss_pred CEEEECCCCCHhHHHHHhC---------CCeEEEEECCHHHHHHHHHHHH
Confidence 9999999999988766431 2379999999998887776664
No 163
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=91.27 E-value=0.27 Score=47.61 Aligned_cols=42 Identities=21% Similarity=0.250 Sum_probs=34.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+|+|||+|.++..+++. ..+++-||+|+.+.+.-++++.
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~---------~~~v~gvD~s~~~~~~a~~~~~ 125 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDL---------GWEVTALELSTSVLAAFRKRLA 125 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTT---------TCCEEEEESCHHHHHHHHHHHH
T ss_pred CcEEEEeccCCHHHHHHHHc---------CCeEEEEECCHHHHHHHHHHHh
Confidence 38999999999998887642 1378999999999887777664
No 164
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=91.26 E-value=0.3 Score=45.80 Aligned_cols=45 Identities=16% Similarity=0.225 Sum_probs=34.1
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+|+|+|||+|.++.-+... .| ..+++.||+|+.+.+.-+++..
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~---~~----~~~v~~vD~s~~~~~~a~~~~~ 115 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKIC---FP----HLHVTIVDSLNKRITFLEKLSE 115 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHH---CT----TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHHHh---CC----CCEEEEEeCCHHHHHHHHHHHH
Confidence 459999999999988877542 22 2479999999988777666553
No 165
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=91.22 E-value=0.24 Score=44.09 Aligned_cols=35 Identities=11% Similarity=0.165 Sum_probs=28.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHH
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL 206 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~ 206 (483)
-+|+|+|||+|.++.-+.+. . +++-||+|+.+.+.
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~------~----~v~gvD~s~~~~~~ 59 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKR------N----TVVSTDLNIRALES 59 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTT------S----EEEEEESCHHHHHT
T ss_pred CeEEEeccCccHHHHHHHhc------C----cEEEEECCHHHHhc
Confidence 49999999999988776431 1 78999999998766
No 166
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=91.16 E-value=0.34 Score=44.65 Aligned_cols=41 Identities=17% Similarity=0.245 Sum_probs=33.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+|+|+|||+|.++..+++. .+++.||+|+.+.+.-++++.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~----------~~v~~vD~s~~~~~~a~~~~~ 75 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH----------YEVTGVDLSEEMLEIAQEKAM 75 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT----------SEEEEEESCHHHHHHHHHHHH
T ss_pred CeEEEecCCCCHHHHHHhhC----------CeEEEEECCHHHHHHHHHhhh
Confidence 59999999999988766431 379999999999888777664
No 167
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=91.15 E-value=0.63 Score=45.32 Aligned_cols=62 Identities=11% Similarity=0.106 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 142 GEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 142 Ge~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-..+...+++.+.... +...+|+|+|||+|.++..+++. + ..+++.||+|+.+.+.-++++.
T Consensus 17 k~~l~~~~~~~l~~~~-~~~~~VLDlGcG~G~~~~~l~~~----~----~~~v~gvD~s~~~l~~a~~~~~ 78 (313)
T 3bgv_A 17 KSVLIGEFLEKVRQKK-KRDITVLDLGCGKGGDLLKWKKG----R----INKLVCTDIADVSVKQCQQRYE 78 (313)
T ss_dssp HHHHHHHHHHHHHHTC---CCEEEEETCTTTTTHHHHHHT----T----CSEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcc-CCCCEEEEECCCCcHHHHHHHhc----C----CCEEEEEeCCHHHHHHHHHHHH
Confidence 3344444444443321 23459999999999998877641 1 2379999999998877666654
No 168
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=91.04 E-value=0.27 Score=47.32 Aligned_cols=60 Identities=13% Similarity=0.020 Sum_probs=41.5
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 146 GVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 146 a~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
|.-++.-+..++...--+|+|+|||+|++...+.+.... .-+++-||+||.+-+.-+++.
T Consensus 63 aa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~------~G~V~avD~s~~~~~~l~~~a 122 (233)
T 4df3_A 63 AAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGP------RGRIYGVEFAPRVMRDLLTVV 122 (233)
T ss_dssp HHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCT------TCEEEEEECCHHHHHHHHHHS
T ss_pred HHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCC------CceEEEEeCCHHHHHHHHHhh
Confidence 333444445555433469999999999999998876532 226888999999876555544
No 169
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=90.99 E-value=0.28 Score=50.07 Aligned_cols=82 Identities=18% Similarity=0.251 Sum_probs=54.1
Q ss_pred CCCCcccCC---CCCCCCCCCccCCCChhHHHHHHHHHHHHHHHHHcC---CCCCcEEEEEcCCcchhHHHHHHHHhcCc
Q 011546 113 NPKAGFYIN---RDVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMG---QPNRVNLVELGPGRGTLMADLLRGASKFK 186 (483)
Q Consensus 113 ~P~~GYY~~---~~~~G~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g---~p~~~~IvEiGaG~GtLa~DIL~~l~~~p 186 (483)
-|-.||-.- +..+|. -|++.+.|- ..|++...-.. .+....|||||||.|.|-.-+|+..+
T Consensus 15 ~~~~~~~~~~~~kk~lGQ--nFL~d~~i~--------~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~--- 81 (353)
T 1i4w_A 15 VPIPGIKDISKLKFFYGF--KYLWNPTVY--------NKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYC--- 81 (353)
T ss_dssp -CCCCCCTTCSSCCGGGC--CCBCCHHHH--------HHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHC---
T ss_pred CcccchhhccCCCCCCCc--CccCCHHHH--------HHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCC---
Confidence 456666653 345775 499988763 23333332111 11236899999999999999987532
Q ss_pred CccccceEEEEecChhhHHHHHHhc
Q 011546 187 NFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 187 ~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
.-+++.||+.+.|...-++++
T Consensus 82 ----~~~vvavE~D~~l~~~L~~~~ 102 (353)
T 1i4w_A 82 ----PRQYSLLEKRSSLYKFLNAKF 102 (353)
T ss_dssp ----CSEEEEECCCHHHHHHHHHHT
T ss_pred ----CCEEEEEecCHHHHHHHHHhc
Confidence 126899999999988777665
No 170
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=90.95 E-value=0.6 Score=42.88 Aligned_cols=46 Identities=17% Similarity=0.215 Sum_probs=36.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+|+|+|||+|.++..+.+.+. ...+++.||+|+.+.+.-++++.
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~------~~~~v~~vD~s~~~~~~a~~~~~ 123 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVG------CTGKVIGIDHIKELVDDSVNNVR 123 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHC------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEEcCCcCHHHHHHHHHhC------CCcEEEEEeCCHHHHHHHHHHHH
Confidence 35999999999999998876542 12379999999999887776664
No 171
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=90.84 E-value=0.26 Score=45.84 Aligned_cols=42 Identities=21% Similarity=0.143 Sum_probs=30.6
Q ss_pred cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhH
Q 011546 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQ 204 (483)
Q Consensus 156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr 204 (483)
++.+..-+|+|+|||+|.++..+.+.. + ..+++-||+||.+-
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~---~----~~~V~gvD~s~~~l 94 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIV---D----EGIIYAVEYSAKPF 94 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHT---T----TSEEEEECCCHHHH
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHc---C----CCEEEEEECCHHHH
Confidence 343344599999999999888776543 1 23789999999753
No 172
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=90.83 E-value=0.28 Score=48.93 Aligned_cols=47 Identities=13% Similarity=0.266 Sum_probs=37.5
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
.+.+|+|+|+|.|.++..+++. . ...+++.||+||.+.+.-++++..
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~---~----~~~~v~~vDid~~~i~~Ar~~~~~ 154 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKH---E----SVEKVTMCEIDEMVIDVAKKFLPG 154 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTC---T----TCCEEEEECSCHHHHHHHHHHCTT
T ss_pred CCCEEEEEcCCcCHHHHHHHHc---C----CCCEEEEEECCHHHHHHHHHHHHH
Confidence 4469999999999998887642 1 234899999999999988887753
No 173
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=90.78 E-value=0.39 Score=44.95 Aligned_cols=45 Identities=13% Similarity=0.137 Sum_probs=35.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+|+|||.|..+..+++.+ | ...+++.||+||.+.+.-++++.
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~---~---~~~~v~~iD~~~~~~~~a~~~~~ 118 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQL---P---PDGQIIACDQDPNATAIAKKYWQ 118 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTS---C---TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEecCCCCHHHHHHHHhC---C---CCCEEEEEECCHHHHHHHHHHHH
Confidence 489999999999988886542 2 13489999999999888777664
No 174
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=90.75 E-value=0.39 Score=47.88 Aligned_cols=62 Identities=19% Similarity=0.270 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 140 MFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 140 ~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
.|-|+++...+. . .|.+.+|+|+|||+|.++..+++. . ...+++.||+||.+.+.-++++..
T Consensus 101 ~y~e~l~~~~l~---~--~~~~~~VLdiG~G~G~~~~~l~~~---~----~~~~v~~vDis~~~l~~ar~~~~~ 162 (321)
T 2pt6_A 101 AYHEMMTHVPMT---V--SKEPKNVLVVGGGDGGIIRELCKY---K----SVENIDICEIDETVIEVSKIYFKN 162 (321)
T ss_dssp HHHHHHHHHHHH---H--SSSCCEEEEEECTTCHHHHHHTTC---T----TCCEEEEEESCHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHh---c--CCCCCEEEEEcCCccHHHHHHHHc---C----CCCEEEEEECCHHHHHHHHHHHHh
Confidence 556766543221 1 234469999999999998887642 1 234899999999999888887753
No 175
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=90.73 E-value=0.24 Score=48.24 Aligned_cols=45 Identities=16% Similarity=0.316 Sum_probs=36.4
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 159 p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
|.+.+|+|+|||+|.++..+++. + ..+++.||+||.+.+.-++.+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~----~----~~~v~~vDid~~~i~~ar~~~ 118 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH----D----VDEVIMVEIDEDVIMVSKDLI 118 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS----C----CSEEEEEESCHHHHHHHHHHT
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC----C----CCEEEEEECCHHHHHHHHHHH
Confidence 34469999999999999887642 2 248999999999988888777
No 176
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=90.65 E-value=0.55 Score=40.30 Aligned_cols=36 Identities=17% Similarity=0.256 Sum_probs=28.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhh
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (483)
..+|+|+|||+|.++..+++.+. ...+++.||+|+ +
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~------~~~~v~~~D~~~-~ 58 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIG------GKGRIIACDLLP-M 58 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHC------TTCEEEEEESSC-C
T ss_pred CCeEEEeCCCCCHHHHHHHHHhC------CCCeEEEEECcc-c
Confidence 35999999999999998877541 123799999999 5
No 177
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=90.62 E-value=0.39 Score=47.94 Aligned_cols=44 Identities=18% Similarity=0.316 Sum_probs=34.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+|+|||+|.++..+++. .| ..+++.||+|+.+.+.-++++.
T Consensus 198 ~~VLDlGcG~G~~~~~la~~---~~----~~~v~~vD~s~~~l~~a~~~~~ 241 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARH---SP----KIRLTLCDVSAPAVEASRATLA 241 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHH---CT----TCBCEEEESBHHHHHHHHHHHH
T ss_pred CeEEEecCccCHHHHHHHHH---CC----CCEEEEEECCHHHHHHHHHHHH
Confidence 48999999999999887654 22 2378999999998777777664
No 178
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=90.47 E-value=0.45 Score=48.00 Aligned_cols=63 Identities=14% Similarity=0.310 Sum_probs=43.1
Q ss_pred CCCChhHHHHHHHHHHHHH----HHHHcC-CCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhh
Q 011546 133 TSPEVSQMFGEMVGVWAMC----LWEQMG-QPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (483)
Q Consensus 133 TSpeIs~~FGe~Ia~~i~~----~w~~~g-~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (483)
+-|+....|.+.++.+-.. +..... .+...+|+|+|||+|.++..+++. +| .++++.+|. |.+
T Consensus 171 ~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~---~p----~~~~~~~D~-~~~ 238 (368)
T 3reo_A 171 TDHRINKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAK---YP----SINAINFDL-PHV 238 (368)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHH---CT----TCEEEEEEC-HHH
T ss_pred hCHHHHHHHHHHHHhhhhhHHHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHh---CC----CCEEEEEeh-HHH
Confidence 4577778888877655322 222233 344579999999999999998764 33 347888998 543
No 179
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=90.43 E-value=0.23 Score=48.14 Aligned_cols=46 Identities=11% Similarity=0.062 Sum_probs=35.8
Q ss_pred CCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 158 QPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 158 ~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.|.+-+|+|+|+|+|.++..+++. + .+++.||++|.+.+.-++.+.
T Consensus 70 ~~~~~~VL~iG~G~G~~~~~ll~~----~-----~~v~~veid~~~i~~ar~~~~ 115 (262)
T 2cmg_A 70 KKELKEVLIVDGFDLELAHQLFKY----D-----THIDFVQADEKILDSFISFFP 115 (262)
T ss_dssp SSCCCEEEEESSCCHHHHHHHTTS----S-----CEEEEECSCHHHHGGGTTTST
T ss_pred CCCCCEEEEEeCCcCHHHHHHHhC----C-----CEEEEEECCHHHHHHHHHHHH
Confidence 345569999999999998887642 1 379999999998777666553
No 180
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=90.07 E-value=0.33 Score=47.20 Aligned_cols=46 Identities=13% Similarity=0.171 Sum_probs=35.8
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
.-+|+|+|||+|.++..+.+.+ + ..+++-||+|+.+.+.-++++..
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~---~----~~~v~gvDis~~~i~~A~~~~~~ 92 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKW---G----PSRMVGLDIDSRLIHSARQNIRH 92 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHT---C----CSEEEEEESCHHHHHHHHHTC--
T ss_pred CCcEEEeCCCCCHHHHHHHHHc---C----CCEEEEECCCHHHHHHHHHHHHh
Confidence 3599999999999998887643 2 23899999999998887777653
No 181
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=90.00 E-value=0.62 Score=43.81 Aligned_cols=48 Identities=21% Similarity=0.140 Sum_probs=36.3
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
...+|+|+|||+|.++.-+++.++ .+ ..+++-||+|+.+-+.-++++.
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~-~~----~~~v~gvDis~~~l~~A~~~~~ 98 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHR-RS----LRQVIASDVDPAPLELAAKNLA 98 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTG-GG----EEEEEEEESCHHHHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhc-cC----CCeEEEEECCHHHHHHHHHHHH
Confidence 357999999999999888876531 11 2478999999998777666554
No 182
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=89.95 E-value=0.33 Score=46.05 Aligned_cols=44 Identities=20% Similarity=0.357 Sum_probs=32.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
...|+|+|||+|.++..+.+ .+|+ ..++-||+|+.+.+.-++++
T Consensus 47 ~~~vLDiGcG~G~~~~~la~---~~p~----~~v~GiDis~~~l~~A~~~~ 90 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSP---LFPD----TLILGLEIRVKVSDYVQDRI 90 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGG---GSTT----SEEEEEESCHHHHHHHHHHH
T ss_pred CCeEEEEccCCcHHHHHHHH---HCCC----CeEEEEECCHHHHHHHHHHH
Confidence 35899999999998877643 2332 47899999999876554443
No 183
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=89.77 E-value=0.52 Score=44.31 Aligned_cols=45 Identities=11% Similarity=0.092 Sum_probs=35.8
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+|+|+|||+|.++..+++... ..+++-||+|+.+.+.-++++.
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~-------~~~v~gvD~s~~~~~~a~~~~~ 110 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLN-------GWYFLATEVDDMCFNYAKKNVE 110 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHH-------CCEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEeCCChhHHHHHHHHhCC-------CCeEEEEECCHHHHHHHHHHHH
Confidence 45899999999999888776432 2479999999999887777664
No 184
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=89.65 E-value=0.55 Score=44.93 Aligned_cols=46 Identities=17% Similarity=0.332 Sum_probs=36.5
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
..+|+|+|||+|.++.-+.+. .| ..+++.||+|+.+.+.-++++..
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~---~~----~~~v~gvDi~~~~~~~a~~n~~~ 82 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAAR---LE----KAEVTLYERSQEMAEFARRSLEL 82 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHH---CT----TEEEEEEESSHHHHHHHHHHTTS
T ss_pred CCEEEEeCChHhHHHHHHHHh---CC----CCeEEEEECCHHHHHHHHHHHHh
Confidence 459999999999988777653 22 24899999999998888877653
No 185
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=89.65 E-value=1 Score=42.92 Aligned_cols=45 Identities=13% Similarity=0.072 Sum_probs=34.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
-+|+++|||+|.++.-+... .| ..+++-||+||..-+.=++++..
T Consensus 17 ~~VlDIGtGsG~l~i~la~~---~~----~~~V~avDi~~~al~~A~~N~~~ 61 (225)
T 3kr9_A 17 AILLDVGSDHAYLPIELVER---GQ----IKSAIAGEVVEGPYQSAVKNVEA 61 (225)
T ss_dssp EEEEEETCSTTHHHHHHHHT---TS----EEEEEEEESSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHh---CC----CCEEEEEECCHHHHHHHHHHHHH
Confidence 58999999999998877542 22 23789999999988777776653
No 186
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=89.58 E-value=1 Score=45.69 Aligned_cols=45 Identities=18% Similarity=0.003 Sum_probs=34.5
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.-+|+|+|||+|+++..+.... + ..+++-+|+|+.+-+.-++++.
T Consensus 218 ~~~vLD~gCGsG~~~i~~a~~~---~----~~~v~g~Dis~~~l~~A~~n~~ 262 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELALRR---Y----SGEIIGIEKYRKHLIGAEMNAL 262 (373)
T ss_dssp SCCEEETTCTTCHHHHHHHHTT---C----CSCEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEccCcCcHHHHHHHHhC---C----CCeEEEEeCCHHHHHHHHHHHH
Confidence 3589999999999887765421 1 2268999999999888777764
No 187
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=89.28 E-value=0.41 Score=44.50 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=31.2
Q ss_pred cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhh
Q 011546 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (483)
Q Consensus 156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (483)
++....-+|+|+|||+|+++..+++.+. | ..+++-||+||.+
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g--~----~~~v~gvD~s~~~ 114 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVG--P----DGLVYAVEFSHRS 114 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHC--T----TCEEEEECCCHHH
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhC--C----CcEEEEEECCHHH
Confidence 3443345999999999999998877541 1 1378999999874
No 188
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=89.18 E-value=0.67 Score=41.57 Aligned_cols=50 Identities=14% Similarity=0.023 Sum_probs=34.1
Q ss_pred HHHHHHHHcCC-CCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChh
Q 011546 148 WAMCLWEQMGQ-PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT 202 (483)
Q Consensus 148 ~i~~~w~~~g~-p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (483)
.+.++.+..+. +...+|+|+|||+|.++..+++.. |. ...+++-||+||.
T Consensus 9 kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~---~~--~~~~v~gvD~s~~ 59 (201)
T 2plw_A 9 KLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERT---KN--YKNKIIGIDKKIM 59 (201)
T ss_dssp HHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHT---TT--SCEEEEEEESSCC
T ss_pred HHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHc---CC--CCceEEEEeCCcc
Confidence 34455555442 334689999999999998887643 21 0247899999994
No 189
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=89.14 E-value=0.51 Score=44.44 Aligned_cols=46 Identities=24% Similarity=0.330 Sum_probs=34.5
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..-+|+|+|||+|.++..+.+. .| ..+++-||+|+.+.+.-++++.
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~---~~----~~~v~gvD~s~~~l~~a~~~~~ 94 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPA---FP----EDLILGMEIRVQVTNYVEDRII 94 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHH---ST----TSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHHHh---CC----CCCEEEEEcCHHHHHHHHHHHH
Confidence 3458999999999998887653 22 2479999999998766555543
No 190
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=89.10 E-value=0.35 Score=45.97 Aligned_cols=44 Identities=14% Similarity=0.100 Sum_probs=33.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
-+|+|+|||+|..+.-+++.+ | ...+++-||+||.+.+.-++++
T Consensus 62 ~~VLDiG~G~G~~t~~la~~~---~---~~~~v~~iD~~~~~~~~a~~~~ 105 (242)
T 3r3h_A 62 KKVLELGTFTGYSALAMSLAL---P---DDGQVITCDINEGWTKHAHPYW 105 (242)
T ss_dssp SEEEEEESCCSHHHHHHHHTS---C---TTCEEEEEECCCSSCCCSHHHH
T ss_pred CEEEEeeCCcCHHHHHHHHhC---C---CCCEEEEEECCHHHHHHHHHHH
Confidence 499999999999998887643 2 2348999999998755544444
No 191
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=89.07 E-value=1 Score=42.83 Aligned_cols=43 Identities=21% Similarity=0.301 Sum_probs=33.5
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+|+|+|||+|.++..+.+ . .. +++-||+||...+.-++++.
T Consensus 121 ~~~VLDiGcG~G~l~~~la~----~----g~-~v~gvDi~~~~v~~a~~n~~ 163 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEK----L----GG-KALGVDIDPMVLPQAEANAK 163 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHH----T----TC-EEEEEESCGGGHHHHHHHHH
T ss_pred CCEEEEecCCCcHHHHHHHH----h----CC-eEEEEECCHHHHHHHHHHHH
Confidence 35999999999999876543 1 12 79999999998887777654
No 192
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=88.94 E-value=0.61 Score=44.76 Aligned_cols=51 Identities=22% Similarity=0.298 Sum_probs=38.9
Q ss_pred cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
++....-+|+|+|||.|.++..+++.+. ...+++.||+|+...+.-++++.
T Consensus 106 ~~~~~~~~VLD~G~G~G~~~~~la~~~~------~~~~v~~vD~s~~~~~~a~~~~~ 156 (275)
T 1yb2_A 106 CGLRPGMDILEVGVGSGNMSSYILYALN------GKGTLTVVERDEDNLKKAMDNLS 156 (275)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHT------TSSEEEEECSCHHHHHHHHHHHH
T ss_pred cCCCCcCEEEEecCCCCHHHHHHHHHcC------CCCEEEEEECCHHHHHHHHHHHH
Confidence 3443446999999999999998877531 12379999999998887777764
No 193
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=88.93 E-value=0.6 Score=42.68 Aligned_cols=43 Identities=19% Similarity=0.222 Sum_probs=33.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+|+|+|||+|.++..++.. . ..+++-||+|+.+.+.-++++.
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~---~-----~~~v~gvD~s~~~l~~a~~~~~ 97 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSR---Q-----AKKVTFLELDKTVANQLKKNLQ 97 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHT---T-----CSEEEEECSCHHHHHHHHHHHH
T ss_pred CeEEEcCCccCHHHHHHHHc---c-----CCEEEEEECCHHHHHHHHHHHH
Confidence 48999999999998776542 1 1278999999999888777664
No 194
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=88.90 E-value=0.45 Score=45.57 Aligned_cols=50 Identities=16% Similarity=0.063 Sum_probs=34.9
Q ss_pred HHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhh
Q 011546 148 WAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (483)
Q Consensus 148 ~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (483)
.++..+..++....-+|+++|||+|.++..+.+.+.. .-+++-||+||.+
T Consensus 64 ~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~------~G~V~avD~s~~~ 113 (232)
T 3id6_C 64 AILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIEL------NGKAYGVEFSPRV 113 (232)
T ss_dssp HHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTT------TSEEEEEECCHHH
T ss_pred HHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCC------CCEEEEEECcHHH
Confidence 3333333344434469999999999999888775432 2378899999976
No 195
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=88.87 E-value=0.42 Score=44.47 Aligned_cols=42 Identities=14% Similarity=0.146 Sum_probs=33.7
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
..+|+|+|||+|.++..+.+.. + +++-||+|+.+.+.-++++
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~---~------~v~gvD~s~~~~~~a~~~~ 98 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFF---P------RVIGLDVSKSALEIAAKEN 98 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHS---S------CEEEEESCHHHHHHHHHHS
T ss_pred CCeEEEEcCCCCHHHHHHHHhC---C------CEEEEECCHHHHHHHHHhC
Confidence 3589999999999998886531 1 6889999999887766665
No 196
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=88.86 E-value=1.3 Score=47.58 Aligned_cols=46 Identities=17% Similarity=0.287 Sum_probs=34.6
Q ss_pred HHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHh
Q 011546 154 EQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN 210 (483)
Q Consensus 154 ~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~ 210 (483)
..++.| ++|+++|||.|.|+..+.+. ..+++-||+|+..-+.-+..
T Consensus 62 ~~~~~~--~~vLDvGCG~G~~~~~la~~---------ga~V~giD~~~~~i~~a~~~ 107 (569)
T 4azs_A 62 RALGRP--LNVLDLGCAQGFFSLSLASK---------GATIVGIDFQQENINVCRAL 107 (569)
T ss_dssp HHHTSC--CEEEEETCTTSHHHHHHHHT---------TCEEEEEESCHHHHHHHHHH
T ss_pred hhcCCC--CeEEEECCCCcHHHHHHHhC---------CCEEEEECCCHHHHHHHHHH
Confidence 345655 79999999999999887551 12789999999986664443
No 197
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=88.76 E-value=0.79 Score=46.03 Aligned_cols=63 Identities=14% Similarity=0.210 Sum_probs=43.8
Q ss_pred CCCChhHHHHHHHHHHH----HHHHHHcC-CCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhh
Q 011546 133 TSPEVSQMFGEMVGVWA----MCLWEQMG-QPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (483)
Q Consensus 133 TSpeIs~~FGe~Ia~~i----~~~w~~~g-~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (483)
..|+....|.+.++.+. ..+..... .+...+|+|+|||+|.++..+++. .| .++++.+|+ |.+
T Consensus 177 ~~~~~~~~f~~~m~~~~~~~~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~---~~----~~~~~~~D~-~~~ 244 (372)
T 1fp1_D 177 KDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISK---YP----LIKGINFDL-PQV 244 (372)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHH---CT----TCEEEEEEC-HHH
T ss_pred hCHHHHHHHHHHHHhhhHHHHHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHH---CC----CCeEEEeCh-HHH
Confidence 46777888887765543 22334443 445579999999999999888764 33 347888898 654
No 198
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=88.48 E-value=0.37 Score=48.06 Aligned_cols=63 Identities=17% Similarity=0.283 Sum_probs=41.7
Q ss_pred CCCChhHHHHHHHHHHHHHH---HHHc--CCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhh
Q 011546 133 TSPEVSQMFGEMVGVWAMCL---WEQM--GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (483)
Q Consensus 133 TSpeIs~~FGe~Ia~~i~~~---w~~~--g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (483)
..|+....|.+.++.+.... .... +.+...+|+|+|||+|.++..+++. +|. ++++.+|+ |.+
T Consensus 156 ~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~---~p~----~~~~~~D~-~~~ 223 (352)
T 1fp2_A 156 KNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICET---FPK----LKCIVFDR-PQV 223 (352)
T ss_dssp HCHHHHHHHHHHHHHTHHHHHHHHHTCHHHHTTCSEEEEETCTTSHHHHHHHHH---CTT----CEEEEEEC-HHH
T ss_pred hChHHHHHHHHHHHhcchhhhhHHHhcccccccCceEEEeCCCccHHHHHHHHH---CCC----CeEEEeeC-HHH
Confidence 45667777777765543221 3223 2233469999999999999888753 343 47999999 754
No 199
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=88.48 E-value=1.1 Score=42.87 Aligned_cols=46 Identities=17% Similarity=0.231 Sum_probs=35.6
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
...+|+|+|||+|.++.-+... .| ..+++.||+|+.+.+.-++++.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~---~~----~~~v~~vD~s~~~~~~a~~~~~ 125 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIV---RP----ELELVLVDATRKKVAFVERAIE 125 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHH---CT----TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHHHH---CC----CCEEEEEECCHHHHHHHHHHHH
Confidence 4469999999999988777543 22 3489999999998877776654
No 200
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=88.27 E-value=1.5 Score=42.06 Aligned_cols=46 Identities=15% Similarity=-0.026 Sum_probs=35.3
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
.-+|+++|||+|.++.-+... . ...+++-+|+||..-+.-++++..
T Consensus 22 g~~VlDIGtGsG~l~i~la~~---~----~~~~V~AvDi~~~al~~A~~N~~~ 67 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQM---G----YCDFAIAGEVVNGPYQSALKNVSE 67 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHT---T----CEEEEEEEESSHHHHHHHHHHHHH
T ss_pred CCEEEEECCchHHHHHHHHHh---C----CCCEEEEEECCHHHHHHHHHHHHH
Confidence 358999999999998877542 1 123688999999988887777653
No 201
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=88.25 E-value=0.73 Score=46.14 Aligned_cols=43 Identities=21% Similarity=0.202 Sum_probs=30.9
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+|+|+|||+|.++.-+++. + ..+++-||+|+ +.+.-+++++
T Consensus 51 ~~~VLDiGcGtG~ls~~la~~----g----~~~V~~vD~s~-~~~~a~~~~~ 93 (348)
T 2y1w_A 51 DKIVLDVGCGSGILSFFAAQA----G----ARKIYAVEAST-MAQHAEVLVK 93 (348)
T ss_dssp TCEEEEETCTTSHHHHHHHHT----T----CSEEEEEECST-HHHHHHHHHH
T ss_pred cCEEEEcCCCccHHHHHHHhC----C----CCEEEEECCHH-HHHHHHHHHH
Confidence 359999999999998766542 1 23789999998 5455455543
No 202
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=88.24 E-value=0.79 Score=41.88 Aligned_cols=43 Identities=19% Similarity=0.259 Sum_probs=33.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+|+|+|||+|.++.-++.. . .-+++-||+|+.+.+.-++++.
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~---~-----~~~V~~vD~s~~~l~~a~~~~~ 98 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSR---Y-----AAGATLIEMDRAVSQQLIKNLA 98 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHT---T-----CSEEEEECSCHHHHHHHHHHHH
T ss_pred CeEEEeCCCcCHHHHHHHhc---C-----CCEEEEEECCHHHHHHHHHHHH
Confidence 48999999999998776542 1 1278999999999888777664
No 203
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=88.08 E-value=1.4 Score=43.40 Aligned_cols=45 Identities=9% Similarity=0.115 Sum_probs=32.5
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
...+|+++|||+|..+...++ . ...+++-||+|+.+-+.-+++..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~---~-----~~~~v~GiD~S~~~l~~A~~~~~ 92 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFY---G-----EIALLVATDPDADAIARGNERYN 92 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHH---T-----TCSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCeEEEEecCCcHhHHHHHh---c-----CCCeEEEEECCHHHHHHHHHHHH
Confidence 346999999999985554432 1 11278999999999887666653
No 204
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=87.86 E-value=1.4 Score=44.18 Aligned_cols=44 Identities=14% Similarity=0.303 Sum_probs=33.9
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.-+|+|+|||+|.++..+++. +|. ++++.+|. |.+.+.-++++.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~---~p~----~~~~~~D~-~~~~~~a~~~~~ 223 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQY---NKE----VEVTIVDL-PQQLEMMRKQTA 223 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHH---STT----CEEEEEEC-HHHHHHHHHHHT
T ss_pred CCEEEEeCCCcCHHHHHHHHh---CCC----CEEEEEeC-HHHHHHHHHHHH
Confidence 459999999999999988764 343 48999999 777666666654
No 205
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=87.85 E-value=1.1 Score=42.40 Aligned_cols=39 Identities=15% Similarity=0.055 Sum_probs=30.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhh
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (483)
-+|+|+|||+|.++.-+.+.++.. ....+++-||+||.+
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~---~~~~~V~gvD~s~~~ 121 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIM---GIDCQVIGIDRDLSR 121 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHT---TCCCEEEEEESCCTT
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhc---CCCCEEEEEeCChHH
Confidence 489999999999999887764321 123479999999986
No 206
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=87.76 E-value=1.1 Score=44.28 Aligned_cols=47 Identities=19% Similarity=0.229 Sum_probs=36.8
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..-+|+|+|||+|.++..+++.+. ...+++-||+||.+.+.-++++.
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g------~~~~v~~vD~~~~~~~~a~~~~~ 151 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVG------SQGRVISFEVRKDHHDLAKKNYK 151 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHC------TTCEEEEEESSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhC------CCceEEEEeCCHHHHHHHHHHHH
Confidence 345999999999999999877541 12378999999998887777664
No 207
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=87.75 E-value=0.65 Score=44.97 Aligned_cols=59 Identities=12% Similarity=0.070 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEec-ChhhHHHHHHhc
Q 011546 142 GEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVEC-SPTLQKLQHHNL 211 (483)
Q Consensus 142 Ge~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~-Sp~Lr~~Q~~~L 211 (483)
++.++.|+.... ......+|+|+|||+|.++.-+.+ .. ..+++.||+ |+.+.+.-++++
T Consensus 64 ~~~l~~~l~~~~---~~~~~~~vLDlG~G~G~~~~~~a~----~~----~~~v~~~D~s~~~~~~~a~~n~ 123 (281)
T 3bzb_A 64 ARALADTLCWQP---ELIAGKTVCELGAGAGLVSIVAFL----AG----ADQVVATDYPDPEILNSLESNI 123 (281)
T ss_dssp HHHHHHHHHHCG---GGTTTCEEEETTCTTSHHHHHHHH----TT----CSEEEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc---hhcCCCeEEEecccccHHHHHHHH----cC----CCEEEEEeCCCHHHHHHHHHHH
Confidence 566677665532 111234899999999998865433 11 127999999 888877666655
No 208
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=87.71 E-value=1.5 Score=42.45 Aligned_cols=46 Identities=7% Similarity=0.043 Sum_probs=35.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
.-+|+++|||+|.|+.-+... . ...+++-||+||..-+.-++++..
T Consensus 22 g~~VlDIGtGsG~l~i~la~~---~----~~~~V~avDi~~~al~~A~~N~~~ 67 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKN---Q----TASFAIAGEVVDGPFQSAQKQVRS 67 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHT---T----SEEEEEEEESSHHHHHHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHh---C----CCCEEEEEECCHHHHHHHHHHHHH
Confidence 359999999999998877542 1 123789999999988877777653
No 209
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=87.54 E-value=0.39 Score=45.18 Aligned_cols=37 Identities=16% Similarity=0.129 Sum_probs=27.9
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecC-hhhH
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECS-PTLQ 204 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~S-p~Lr 204 (483)
.-+|+|+|||+|.++..+.+ ..| ..+++-||+| +.|.
T Consensus 25 ~~~vLDiGCG~G~~~~~la~---~~~----~~~v~GvD~s~~~ml 62 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAI---NDQ----NTFYIGIDPVKENLF 62 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHH---TCT----TEEEEEECSCCGGGH
T ss_pred CCEEEEEeccCcHHHHHHHH---hCC----CCEEEEEeCCHHHHH
Confidence 35899999999998887753 122 3478899999 7773
No 210
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=87.52 E-value=0.28 Score=46.47 Aligned_cols=57 Identities=25% Similarity=0.427 Sum_probs=40.0
Q ss_pred CccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHH
Q 011546 130 DFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL 206 (483)
Q Consensus 130 DFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~ 206 (483)
.|.|.+.+.... + +.++....-+|+|+|||+|.++.-+++.. .+++-||+|+.+.+.
T Consensus 10 ~fl~~~~~~~~i--------~---~~~~~~~~~~VLDiG~G~G~~~~~l~~~~---------~~v~~id~~~~~~~~ 66 (245)
T 1yub_A 10 NFLTSEKVLNQI--------I---KQLNLKETDTVYEIGTGKGHLTTKLAKIS---------KQVTSIELDSHLFNL 66 (245)
T ss_dssp CBCCCTTTHHHH--------H---HHCCCCSSEEEEECSCCCSSCSHHHHHHS---------SEEEESSSSCSSSSS
T ss_pred CCCCCHHHHHHH--------H---HhcCCCCCCEEEEEeCCCCHHHHHHHHhC---------CeEEEEECCHHHHHH
Confidence 488888764332 2 22343344689999999999998886531 378999999987543
No 211
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=86.90 E-value=2.4 Score=41.41 Aligned_cols=118 Identities=7% Similarity=0.029 Sum_probs=69.0
Q ss_pred ChHHHHHHHHHHHhhcCCcccHHHHHHHhhcCCCCcccCC---CCCCCCCCCccCCCChhHHHHHHHHHHHHHHHHHcCC
Q 011546 82 LESELVKHLKGIIKFRGGPISVAEYMEEVLTNPKAGFYIN---RDVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQ 158 (483)
Q Consensus 82 ~~~~L~~~i~~~I~~~~GpIsf~~FM~~aLY~P~~GYY~~---~~~~G~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~ 158 (483)
+...|..+|...++.. |-=+|++|.+....+....-... .--+|.. .|+--|+--.++-+. ++.. .
T Consensus 36 k~~~~~~Rl~~r~~~~-~~~~~~~y~~~l~~~~~~~e~~~l~~~lt~~~t-~FfRd~~~f~~l~~~----llp~----~- 104 (274)
T 1af7_A 36 KRDMVYNRLVRRLRAL-GLDDFGRYLSMLEANQNSAEWQAFINALTTNLT-AFFREAHHFPILAEH----ARRR----H- 104 (274)
T ss_dssp GHHHHHHHHHHHHHHH-TCCCHHHHHHHHHHCTTCTHHHHHHHHHCCCCC-CTTTTTTHHHHHHHH----HHHS----C-
T ss_pred hHHHHHHHHHHHHHHc-CCCCHHHHHHHHccCCCHHHHHHHHHHHhhcCc-cccCChHHHHHHHHH----ccCC----C-
Confidence 4577888888888888 65689999887765432211111 1113322 455544433333322 2211 1
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHhc-CcCccccceEEEEecChhhHHHHHHhc
Q 011546 159 PNRVNLVELGPGRGTLMADLLRGASK-FKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 159 p~~~~IvEiGaG~GtLa~DIL~~l~~-~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
.+.+|+++|||+|.-+.-|.-.+.. .+......+++-+|+|+.+-+.-++.+
T Consensus 105 -~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 105 -GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGI 157 (274)
T ss_dssp -SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTE
T ss_pred -CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcC
Confidence 3579999999999955444333322 232111348899999999877766654
No 212
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=86.90 E-value=0.91 Score=43.02 Aligned_cols=47 Identities=9% Similarity=0.165 Sum_probs=33.3
Q ss_pred HHHHcCCC-CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHH
Q 011546 152 LWEQMGQP-NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL 206 (483)
Q Consensus 152 ~w~~~g~p-~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~ 206 (483)
.++.++.+ ...+|+|+|||+|.++.-+++. + ..+++-||+|+.+-+.
T Consensus 28 ~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~----g----~~~V~gvDis~~ml~~ 75 (232)
T 3opn_A 28 ALKEFHLEINGKTCLDIGSSTGGFTDVMLQN----G----AKLVYALDVGTNQLAW 75 (232)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHHHHHHHT----T----CSEEEEECSSCCCCCH
T ss_pred HHHHcCCCCCCCEEEEEccCCCHHHHHHHhc----C----CCEEEEEcCCHHHHHH
Confidence 34444443 3459999999999988877652 1 1278999999987554
No 213
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=86.88 E-value=0.4 Score=46.26 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHH
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQK 205 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~ 205 (483)
..-+|+|+|||+|.++..+.+. + -+++-||+|+.+.+
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~------~---~~v~gvD~s~~ml~ 75 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF------F---ERVHAVDPGEAQIR 75 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT------C---SEEEEEESCHHHHH
T ss_pred CCCCEEEEcCCCCHHHHHHHHh------C---CEEEEEeCcHHhhh
Confidence 3458999999999988876432 1 26889999998753
No 214
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=86.83 E-value=0.74 Score=45.92 Aligned_cols=61 Identities=18% Similarity=0.217 Sum_probs=39.9
Q ss_pred CCCChhH--HHHHHHHHHHH---HHHHHc--CCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecC
Q 011546 133 TSPEVSQ--MFGEMVGVWAM---CLWEQM--GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECS 200 (483)
Q Consensus 133 TSpeIs~--~FGe~Ia~~i~---~~w~~~--g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~S 200 (483)
..|+... .|.+.++.+.. .+.... +.+...+|||+|||+|.++..+++. +| .++++.+|.+
T Consensus 159 ~~p~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~---~p----~~~~~~~D~~ 226 (358)
T 1zg3_A 159 KDSESSTLSMFQDAMASDSRMFKLVLQENKRVFEGLESLVDVGGGTGGVTKLIHEI---FP----HLKCTVFDQP 226 (358)
T ss_dssp SGGGHHHHHHHHHHHHHHHHTHHHHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHH---CT----TSEEEEEECH
T ss_pred cChhhhhHHHHHHHHhcccHHHHHHHHhcchhccCCCEEEEECCCcCHHHHHHHHH---CC----CCeEEEeccH
Confidence 4577777 88776654321 222322 1123359999999999999998764 33 3478889983
No 215
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=86.77 E-value=1.3 Score=44.67 Aligned_cols=62 Identities=21% Similarity=0.298 Sum_probs=41.7
Q ss_pred CCCChhHHHHHHHHHHHH----HHHHHcC-CCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChh
Q 011546 133 TSPEVSQMFGEMVGVWAM----CLWEQMG-QPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT 202 (483)
Q Consensus 133 TSpeIs~~FGe~Ia~~i~----~~w~~~g-~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (483)
+.|+....|...++.+-. .+..... .+...+|+|+|||+|.++..+++. +|. ++++.+|. |.
T Consensus 169 ~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~---~p~----~~~~~~D~-~~ 235 (364)
T 3p9c_A 169 TDPRFNRVFNEGMKNHSIIITKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAH---YPT----IKGVNFDL-PH 235 (364)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHH---CTT----CEEEEEEC-HH
T ss_pred hCHHHHHHHHHHHHHhhHHHHHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHH---CCC----CeEEEecC-HH
Confidence 456677777777665422 2233343 444579999999999999998764 343 47888998 54
No 216
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=86.62 E-value=3.1 Score=42.68 Aligned_cols=67 Identities=13% Similarity=0.065 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhc-CcCc------------------------------ccc
Q 011546 143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASK-FKNF------------------------------TES 191 (483)
Q Consensus 143 e~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~-~p~~------------------------------~~~ 191 (483)
|.||..++. ..+......|++.+||+||++.-......+ .|.+ ...
T Consensus 187 e~lAa~ll~---l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 263 (393)
T 3k0b_A 187 ETMAAALVL---LTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQP 263 (393)
T ss_dssp HHHHHHHHH---HSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred HHHHHHHHH---HhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCC
Confidence 556665543 345444568999999999997665544332 1211 012
Q ss_pred ceEEEEecChhhHHHHHHhcc
Q 011546 192 LHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 192 l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+++-+|+||.+-+.-++++.
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~ 284 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAV 284 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHH
Confidence 469999999999888777764
No 217
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=86.41 E-value=0.42 Score=53.99 Aligned_cols=72 Identities=15% Similarity=0.162 Sum_probs=48.7
Q ss_pred CCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHH
Q 011546 127 AEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL 206 (483)
Q Consensus 127 ~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~ 206 (483)
..|.|+|+++|..+..++.. .+ . ....+...+|+|.|||+|.|+..+.+.+... ...+++-+|++|...+.
T Consensus 293 k~GqFYTP~eLA~lMVeLA~-il---l-~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei----~~~~IyGvEIDp~Al~L 363 (878)
T 3s1s_A 293 HEGVVPTDIELGKVLSIISQ-HI---L-GRPLTEDEVISDPAAGSGNLLATVSAGFNNV----MPRQIWANDIETLFLEL 363 (878)
T ss_dssp CCBSSSCCHHHHHHHHHHHH-HH---H-CSCCCTTCEEEETTCTTSHHHHHHHHTSTTC----CGGGEEEECSCGGGHHH
T ss_pred cCceEcCCHHHHHHHHHHHh-hh---c-cccCCCCCEEEECCCCccHHHHHHHHHhccc----CCCeEEEEECCHHHHHH
Confidence 46899999998765544321 11 1 1112234699999999999988776654211 23578999999988776
Q ss_pred H
Q 011546 207 Q 207 (483)
Q Consensus 207 Q 207 (483)
-
T Consensus 364 A 364 (878)
T 3s1s_A 364 L 364 (878)
T ss_dssp H
T ss_pred H
Confidence 5
No 218
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=86.36 E-value=1.7 Score=44.49 Aligned_cols=67 Identities=12% Similarity=0.046 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhc-CcCc------------------------------ccc
Q 011546 143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASK-FKNF------------------------------TES 191 (483)
Q Consensus 143 e~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~-~p~~------------------------------~~~ 191 (483)
|.||..++. ..+......|++.|||+||++........+ .|.+ ...
T Consensus 181 e~lAa~ll~---~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 181 ETLAAGLIY---LTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp HHHHHHHHH---TSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred HHHHHHHHH---hhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 456665443 345444568999999999998777655432 1211 012
Q ss_pred ceEEEEecChhhHHHHHHhcc
Q 011546 192 LHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 192 l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+++-+|+|+.+-+.-++++.
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~ 278 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAE 278 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHH
Confidence 468999999999888777664
No 219
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=86.35 E-value=1.1 Score=44.81 Aligned_cols=44 Identities=14% Similarity=0.143 Sum_probs=31.2
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..-+|+|+|||+|.++.-+.+. + ..+++-||+|+ +.+.-++++.
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~----g----~~~v~gvD~s~-~~~~a~~~~~ 107 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKA----G----AKKVLGVDQSE-ILYQAMDIIR 107 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT----T----CSEEEEEESST-HHHHHHHHHH
T ss_pred CCCEEEEeeccCcHHHHHHHHc----C----CCEEEEEChHH-HHHHHHHHHH
Confidence 3459999999999988766542 1 23799999998 5555455543
No 220
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=86.13 E-value=0.8 Score=42.71 Aligned_cols=45 Identities=13% Similarity=0.007 Sum_probs=33.3
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
...+|+|+|||+|.++.-+.+ . .. .+++.||+|+.+.+.-++++.
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~---~---~~--~~v~gvD~s~~~l~~a~~~~~ 100 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSAC---E---SF--TEIIVSDYTDQNLWELQKWLK 100 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGG---G---TE--EEEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEECCCccHHHHHHhh---c---cc--CeEEEecCCHHHHHHHHHHHh
Confidence 446999999999987665432 1 11 379999999998877777664
No 221
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=85.87 E-value=2.8 Score=46.03 Aligned_cols=61 Identities=23% Similarity=0.300 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCC-CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChh
Q 011546 139 QMFGEMVGVWAMCLWEQMGQP-NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT 202 (483)
Q Consensus 139 ~~FGe~Ia~~i~~~w~~~g~p-~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (483)
..|-++|...+.+...+.... ....|+.+|||||-|..-.+++.+... .+++++-||.||.
T Consensus 335 ~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~---~~vkVyAVEknp~ 396 (637)
T 4gqb_A 335 SQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQAD---RRIKLYAVEKNPN 396 (637)
T ss_dssp HHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTT---CEEEEEEEESCHH
T ss_pred HHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcC---CCcEEEEEECCHH
Confidence 467888888776654333322 335788999999999888888876532 3457889999995
No 222
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=85.85 E-value=2.1 Score=48.74 Aligned_cols=86 Identities=20% Similarity=0.128 Sum_probs=52.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcccccccCcCCcccceeeccCCCCceeec-c
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLAGTPVSWH-A 240 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~~~~~~~~~~~~~~~~~~~~~~~v~W~-~ 240 (483)
.+|+|+|||+|.++..+.+. .+ ...+++-||+|+.+.+.-++++......... ...++.+. .
T Consensus 723 ~rVLDVGCGTG~lai~LAr~---g~---p~a~VtGVDIS~emLe~AReRLa~~lnAkr~-----------gl~nVefiqG 785 (950)
T 3htx_A 723 STLVDFGCGSGSLLDSLLDY---PT---SLQTIIGVDISPKGLARAAKMLHVKLNKEAC-----------NVKSATLYDG 785 (950)
T ss_dssp SEEEEETCSSSHHHHHHTSS---CC---CCCEEEEEESCHHHHHHHHHHHHHHTTTTCS-----------SCSEEEEEES
T ss_pred CEEEEECCCCCHHHHHHHHh---CC---CCCeEEEEECCHHHHHHHHHHhhhccchhhc-----------CCCceEEEEC
Confidence 59999999999988776431 11 1237999999999988877766431100000 00134443 2
Q ss_pred ccccCCC--CCCEEEEEecccccccc
Q 011546 241 ALEQVPS--GFPTIIVAHEFYDALPV 264 (483)
Q Consensus 241 sl~~lp~--~~~~iiiANEffDALPv 264 (483)
++.+++. +..=+|++++++.-+|-
T Consensus 786 Da~dLp~~d~sFDlVV~~eVLeHL~d 811 (950)
T 3htx_A 786 SILEFDSRLHDVDIGTCLEVIEHMEE 811 (950)
T ss_dssp CTTSCCTTSCSCCEEEEESCGGGSCH
T ss_pred chHhCCcccCCeeEEEEeCchhhCCh
Confidence 3334432 22347888999988884
No 223
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=85.84 E-value=1.6 Score=38.79 Aligned_cols=54 Identities=7% Similarity=-0.001 Sum_probs=33.4
Q ss_pred HHHHHHHcCC-CCCcEEEEEcCCcchhHHHHHHHHhcC--cCccccceEEEEecChh
Q 011546 149 AMCLWEQMGQ-PNRVNLVELGPGRGTLMADLLRGASKF--KNFTESLHIHLVECSPT 202 (483)
Q Consensus 149 i~~~w~~~g~-p~~~~IvEiGaG~GtLa~DIL~~l~~~--p~~~~~l~y~iVE~Sp~ 202 (483)
+.++...... ...-+|+|+|||+|.++.-+.+.+... +..-...+++-||+|+.
T Consensus 10 l~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~ 66 (196)
T 2nyu_A 10 LLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI 66 (196)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC
T ss_pred HHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc
Confidence 3344444442 233599999999999998887653210 00001147899999994
No 224
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=85.79 E-value=1.8 Score=43.05 Aligned_cols=51 Identities=20% Similarity=0.229 Sum_probs=38.2
Q ss_pred HcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 155 QMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 155 ~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+....-+|+|+|||+|.++.-++.. .+ ..+++-||+||.+-++-++++.
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~---~~----ga~V~gIDis~~~l~~Ar~~~~ 167 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSH---VY----GMRVNVVEIEPDIAELSRKVIE 167 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHH---TT----CCEEEEEESSHHHHHHHHHHHH
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHH---cc----CCEEEEEECCHHHHHHHHHHHH
Confidence 345555679999999999887766532 22 2489999999999888777764
No 225
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=85.69 E-value=1 Score=42.74 Aligned_cols=44 Identities=18% Similarity=0.260 Sum_probs=33.9
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.-+|+|+|||+|.++.-+.+. . .. +++.||+|+.+.+.-++++.
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~---~----~~-~v~gvDi~~~~~~~a~~n~~ 93 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTR---T----KA-KIVGVEIQERLADMAKRSVA 93 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTT---C----CC-EEEEECCSHHHHHHHHHHHH
T ss_pred CCEEEEcCCchhHHHHHHHHh---c----CC-cEEEEECCHHHHHHHHHHHH
Confidence 459999999999988765432 1 12 79999999999887777664
No 226
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=85.19 E-value=0.5 Score=45.06 Aligned_cols=61 Identities=13% Similarity=0.103 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHc---CCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 145 VGVWAMCLWEQM---GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 145 Ia~~i~~~w~~~---g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
+..|+.+.+.++ +.....+|+|+|||+|.++.-.+ + +. .-+++-||+||.+.+.-+++++.
T Consensus 37 ~~~~~~~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~---~--~~---~~~v~g~D~s~~~l~~a~~~~~~ 100 (263)
T 2a14_A 37 MLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAA---C--DS---FQDITLSDFTDRNREELEKWLKK 100 (263)
T ss_dssp HHHHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTG---G--GT---EEEEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEeCCCccHHHHHHH---H--hh---hcceeeccccHHHHHHHHHHHhc
Confidence 344555555433 33344689999999997643211 1 11 12689999999998887777653
No 227
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=85.12 E-value=3.6 Score=42.15 Aligned_cols=67 Identities=15% Similarity=0.114 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhc-CcCc------------------------------ccc
Q 011546 143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASK-FKNF------------------------------TES 191 (483)
Q Consensus 143 e~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~-~p~~------------------------------~~~ 191 (483)
|.||..++.+ .+....-.|++.+||+||++-.......+ .|.+ -..
T Consensus 180 e~LAaall~l---~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 256 (384)
T 3ldg_A 180 ENMAAAIILL---SNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQ 256 (384)
T ss_dssp HHHHHHHHHH---TTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred HHHHHHHHHH---hCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCC
Confidence 5566554433 44444468999999999998666544332 1211 012
Q ss_pred ceEEEEecChhhHHHHHHhcc
Q 011546 192 LHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 192 l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+++-+|+|+.+-+.-++++.
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~ 277 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAR 277 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHH
Confidence 469999999999888777764
No 228
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=84.91 E-value=0.91 Score=46.55 Aligned_cols=46 Identities=15% Similarity=0.296 Sum_probs=38.1
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 159 p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
|.+-+|+++|+|.|.++..+++. + ..++..||++|.+-+.-++.+.
T Consensus 187 p~pkrVL~IGgG~G~~arellk~----~----~~~Vt~VEID~~vie~Ar~~~~ 232 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKL----K----PKMVTMVEIDQMVIDGCKKYMR 232 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT----C----CSEEEEEESCHHHHHHHHHHCC
T ss_pred CCCCEEEEEECChhHHHHHHHHC----C----CCEEEEEECCHHHHHHHHHHHH
Confidence 56679999999999998888652 2 1379999999999999888875
No 229
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=83.62 E-value=1.2 Score=44.14 Aligned_cols=42 Identities=17% Similarity=0.237 Sum_probs=29.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+|+|+|||+|.++..+++. + ..+++-||+|+ +.+.-++++.
T Consensus 40 ~~VLDiGcGtG~ls~~la~~----g----~~~v~~vD~s~-~~~~a~~~~~ 81 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKH----G----AKHVIGVDMSS-IIEMAKELVE 81 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHT----C----CSEEEEEESST-HHHHHHHHHH
T ss_pred CEEEEecCccHHHHHHHHHC----C----CCEEEEEChHH-HHHHHHHHHH
Confidence 48999999999988766542 1 23799999996 4444444443
No 230
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=83.07 E-value=7.1 Score=38.93 Aligned_cols=72 Identities=13% Similarity=0.168 Sum_probs=43.6
Q ss_pred CCCChhHHHHHHHHHH----HHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHH
Q 011546 133 TSPEVSQMFGEMVGVW----AMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQH 208 (483)
Q Consensus 133 TSpeIs~~FGe~Ia~~----i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~ 208 (483)
..|+....|...++.. ...+......+..-+||++|||+|.++..|++. +|+ ++.++.+. |...+.-+
T Consensus 148 ~~~~~~~~f~~aM~~~~~~~~~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~---~p~----~~~~~~dl-p~v~~~a~ 219 (353)
T 4a6d_A 148 RSEGERLQFMQALQEVWSVNGRSVLTAFDLSVFPLMCDLGGGAGALAKECMSL---YPG----CKITVFDI-PEVVWTAK 219 (353)
T ss_dssp SSHHHHHHHHHHHHTTHHHHHHHHHHSSCGGGCSEEEEETCTTSHHHHHHHHH---CSS----CEEEEEEC-HHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCeEEeeCCCCCHHHHHHHHh---CCC----ceeEeccC-HHHHHHHH
Confidence 3455566666655322 122333344444458999999999999888764 454 46777776 55555545
Q ss_pred Hhcc
Q 011546 209 HNLK 212 (483)
Q Consensus 209 ~~L~ 212 (483)
+.+.
T Consensus 220 ~~~~ 223 (353)
T 4a6d_A 220 QHFS 223 (353)
T ss_dssp HHSC
T ss_pred Hhhh
Confidence 5553
No 231
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=82.89 E-value=2.1 Score=41.73 Aligned_cols=44 Identities=7% Similarity=-0.016 Sum_probs=36.3
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 159 p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+.+-+|+++|||.|-|+.-+. ...+|+-+++|+.+-+.-++.+.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----------~~~~y~a~DId~~~i~~ar~~~~ 147 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----------GIASVWGCDIHQGLGDVITPFAR 147 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----------TCSEEEEEESBHHHHHHHHHHHH
T ss_pred CCCCeEEEecCCccHHHHHhc----------cCCeEEEEeCCHHHHHHHHHHHH
Confidence 345699999999999988764 34589999999999998888764
No 232
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=82.73 E-value=1.8 Score=43.88 Aligned_cols=45 Identities=16% Similarity=0.210 Sum_probs=32.1
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 159 p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
....+|+|+|||+|.++..+++. + ..+++-||+| .+.+.-++++.
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~----g----~~~V~gvD~s-~~~~~a~~~~~ 106 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQA----G----ARKVYAVEAT-KMADHARALVK 106 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHT----T----CSEEEEEESS-TTHHHHHHHHH
T ss_pred CCCCEEEEeccCcCHHHHHHHhc----C----CCEEEEEccH-HHHHHHHHHHH
Confidence 34469999999999998777653 1 1279999999 55555455553
No 233
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=82.49 E-value=1.4 Score=44.13 Aligned_cols=41 Identities=17% Similarity=0.271 Sum_probs=29.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
.+|+|+|||+|.++.-+++. + ..+++-||+|+.+ +.-++++
T Consensus 68 ~~VLDvGcG~G~~~~~la~~----g----~~~v~gvD~s~~l-~~a~~~~ 108 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKA----G----ARKVIGIECSSIS-DYAVKIV 108 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHT----T----CSEEEEEECSTHH-HHHHHHH
T ss_pred CEEEEEeccchHHHHHHHHC----C----CCEEEEECcHHHH-HHHHHHH
Confidence 58999999999988777653 1 2379999999744 3333333
No 234
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=82.29 E-value=1.6 Score=41.70 Aligned_cols=45 Identities=16% Similarity=0.169 Sum_probs=31.4
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
...+|+|+|||+|.++ ++. ... ...+++-||+|+.+.+.-++++.
T Consensus 71 ~~~~vLDiGcG~G~~~--~l~--~~~----~~~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQ--LLS--ACS----HFEDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp CCSEEEEETCTTCCGG--GTT--GGG----GCSEEEEECSCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcChHH--HHh--hcc----CCCeEEEeCCCHHHHHHHHHHHh
Confidence 3469999999999932 211 111 11279999999999887777664
No 235
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=82.11 E-value=2.3 Score=42.37 Aligned_cols=50 Identities=8% Similarity=0.031 Sum_probs=37.6
Q ss_pred CCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 157 g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+....-.|+|+|||+|+++.-+..... ...+++-+|+||.+.+.-++++.
T Consensus 200 ~~~~~~~vLD~gcGsG~~~ie~a~~~~------~~~~v~g~Di~~~~i~~a~~n~~ 249 (354)
T 3tma_A 200 DARPGMRVLDPFTGSGTIALEAASTLG------PTSPVYAGDLDEKRLGLAREAAL 249 (354)
T ss_dssp TCCTTCCEEESSCTTSHHHHHHHHHHC------TTSCEEEEESCHHHHHHHHHHHH
T ss_pred CCCCCCEEEeCCCCcCHHHHHHHHhhC------CCceEEEEECCHHHHHHHHHHHH
Confidence 433445899999999999887765431 12478999999999888777765
No 236
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=81.15 E-value=3.4 Score=39.68 Aligned_cols=68 Identities=16% Similarity=0.108 Sum_probs=47.8
Q ss_pred CCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHH
Q 011546 128 EGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ 207 (483)
Q Consensus 128 ~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q 207 (483)
.|-|++-.+.+++-..++ +....-+|+|+|||+|..+..+...+. ...+++-||+|+...+.-
T Consensus 62 ~G~~~~qd~~s~l~~~~l-----------~~~~g~~VLDlgaG~G~~t~~la~~~~------~~~~v~avD~~~~~l~~~ 124 (274)
T 3ajd_A 62 FGYYMPQSISSMIPPIVL-----------NPREDDFILDMCAAPGGKTTHLAQLMK------NKGTIVAVEISKTRTKAL 124 (274)
T ss_dssp TTSEEECCSGGGHHHHHH-----------CCCTTCEEEETTCTTCHHHHHHHHHTT------TCSEEEEEESCHHHHHHH
T ss_pred CCeEEEeCHHHHHHHHHh-----------CCCCcCEEEEeCCCccHHHHHHHHHcC------CCCEEEEECCCHHHHHHH
Confidence 677877777776543322 222235899999999999988876532 224789999999977766
Q ss_pred HHhcc
Q 011546 208 HHNLK 212 (483)
Q Consensus 208 ~~~L~ 212 (483)
++++.
T Consensus 125 ~~~~~ 129 (274)
T 3ajd_A 125 KSNIN 129 (274)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66664
No 237
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=80.68 E-value=1.4 Score=40.25 Aligned_cols=37 Identities=24% Similarity=0.249 Sum_probs=28.5
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHh
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN 210 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~ 210 (483)
..+|+|+|||+|.++..++. . +.||+|+.+.+.-+++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~----------~---~~vD~s~~~~~~a~~~ 84 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKI----------K---IGVEPSERMAEIARKR 84 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTC----------C---EEEESCHHHHHHHHHT
T ss_pred CCcEEEeCCCCCHHHHHHHH----------H---hccCCCHHHHHHHHhc
Confidence 45899999999998876532 1 7899999987765543
No 238
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=80.62 E-value=3.9 Score=39.45 Aligned_cols=44 Identities=14% Similarity=0.155 Sum_probs=32.3
Q ss_pred cEEEEEcCCc---chhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGR---GTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~---GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+++|||. |.+..-+.+ ..|. .+++-||.||.+-+.-++++.
T Consensus 79 ~~vLDlGcG~pt~G~~~~~~~~---~~p~----~~v~~vD~sp~~l~~Ar~~~~ 125 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQNTHEVAQS---VNPD----ARVVYVDIDPMVLTHGRALLA 125 (274)
T ss_dssp CEEEEETCCSCCSSCHHHHHHH---HCTT----CEEEEEESSHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCCChHHHHHHH---hCCC----CEEEEEECChHHHHHHHHhcC
Confidence 5999999999 987533222 2333 479999999998877777664
No 239
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=80.53 E-value=2.2 Score=38.51 Aligned_cols=54 Identities=22% Similarity=0.356 Sum_probs=35.4
Q ss_pred CChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcch-hHHHHHHHHhcCcCccccceEEEEecChh
Q 011546 135 PEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGT-LMADLLRGASKFKNFTESLHIHLVECSPT 202 (483)
Q Consensus 135 peIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~Gt-La~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (483)
|+-+.| =|.||.||.+-+ . .+-++||+|+|+|. .|.-+-+ + ..+.+.-+|+||.
T Consensus 16 ~~~~~m-~e~LaeYI~~~~---~--~~~rVlEVG~G~g~~vA~~La~---~-----~g~~V~atDInp~ 70 (153)
T 2k4m_A 16 PRGSHM-WNDLAVYIIRCS---G--PGTRVVEVGAGRFLYVSDYIRK---H-----SKVDLVLTDIKPS 70 (153)
T ss_dssp CCCCHH-HHHHHHHHHHHS---C--SSSEEEEETCTTCCHHHHHHHH---H-----SCCEEEEECSSCS
T ss_pred cchhhH-HHHHHHHHHhcC---C--CCCcEEEEccCCChHHHHHHHH---h-----CCCeEEEEECCcc
Confidence 555777 678888886654 2 23599999999995 4444321 1 1235777888875
No 240
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=79.51 E-value=4.4 Score=40.39 Aligned_cols=42 Identities=12% Similarity=0.033 Sum_probs=33.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+|+|+|||+|.++..+++. .. +++-||+|+.+.+.-++++.
T Consensus 155 ~~VLDlgcGtG~~sl~la~~--------ga-~V~~VD~s~~al~~a~~n~~ 196 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAA--------GA-EVTHVDASKKAIGWAKENQV 196 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHT--------TC-EEEEECSCHHHHHHHHHHHH
T ss_pred CcEEEcccccCHHHHHHHHc--------CC-EEEEEECCHHHHHHHHHHHH
Confidence 48999999999998877651 12 78999999998877776654
No 241
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=78.60 E-value=1.8 Score=39.16 Aligned_cols=30 Identities=13% Similarity=0.291 Sum_probs=24.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChh
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT 202 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (483)
..+|+|+|||+|.++..+ ..+++.||+|+.
T Consensus 68 ~~~vLDiG~G~G~~~~~l------------~~~v~~~D~s~~ 97 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSI------------RNPVHCFDLASL 97 (215)
T ss_dssp TSCEEEETCTTCHHHHHC------------CSCEEEEESSCS
T ss_pred CCeEEEECCcCCHHHHHh------------hccEEEEeCCCC
Confidence 358999999999987654 137899999997
No 242
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=78.59 E-value=2.5 Score=44.55 Aligned_cols=42 Identities=19% Similarity=0.159 Sum_probs=29.7
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
..+|+|+|||+|.++.-+.+ .+ ..+++.||+|+ +.+.-++++
T Consensus 159 ~~~VLDiGcGtG~la~~la~----~~----~~~V~gvD~s~-~l~~A~~~~ 200 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAAQ----AG----ARKIYAVEAST-MAQHAEVLV 200 (480)
T ss_dssp TCEEEEESCSTTHHHHHHHH----TT----CSEEEEEECHH-HHHHHHHHH
T ss_pred CCEEEEecCcccHHHHHHHH----cC----CCEEEEEEcHH-HHHHHHHHH
Confidence 35999999999998875543 22 23799999999 444444444
No 243
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=77.52 E-value=3.9 Score=40.50 Aligned_cols=45 Identities=13% Similarity=0.203 Sum_probs=37.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
-+|+++|||+|.++.-+++.+ | ..+++-||.||.+-+.-++++..
T Consensus 28 ~~vLD~g~G~G~~s~~la~~~---~----~~~VigvD~d~~al~~A~~~~~~ 72 (301)
T 1m6y_A 28 KIILDCTVGEGGHSRAILEHC---P----GCRIIGIDVDSEVLRIAEEKLKE 72 (301)
T ss_dssp CEEEETTCTTSHHHHHHHHHC---T----TCEEEEEESCHHHHHHHHHHTGG
T ss_pred CEEEEEeCCcCHHHHHHHHHC---C----CCEEEEEECCHHHHHHHHHHHHh
Confidence 589999999999999887753 2 23789999999998887777754
No 244
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=77.27 E-value=2 Score=41.42 Aligned_cols=45 Identities=22% Similarity=0.243 Sum_probs=35.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.-+|+|+|||+|+++.-+.+.. + ..+++-||+||...+.-++++.
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~---~----~~~V~~vD~s~~av~~a~~n~~ 164 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYS---K----PKLVYAIEKNPTAYHYLCENIK 164 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHT---C----CSEEEEEECCHHHHHHHHHHHH
T ss_pred CCEEEEecCcCCHHHHHHHHhC---C----CCEEEEEeCCHHHHHHHHHHHH
Confidence 3589999999999998876542 1 2478999999998877666654
No 245
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=77.17 E-value=2.8 Score=38.10 Aligned_cols=46 Identities=13% Similarity=0.075 Sum_probs=32.0
Q ss_pred HHHHHHHHcCCC-CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChh
Q 011546 148 WAMCLWEQMGQP-NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT 202 (483)
Q Consensus 148 ~i~~~w~~~g~p-~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (483)
.+.++.++.+.. ..-+|+|+|||+|.++.-+.+. ..+++-||+||.
T Consensus 12 KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~---------~~~V~gvD~~~~ 58 (191)
T 3dou_A 12 KLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL---------ARKIISIDLQEM 58 (191)
T ss_dssp HHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT---------CSEEEEEESSCC
T ss_pred HHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc---------CCcEEEEecccc
Confidence 344555555432 2369999999999988776432 337889999985
No 246
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=76.69 E-value=6.9 Score=40.03 Aligned_cols=41 Identities=17% Similarity=0.244 Sum_probs=27.0
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 163 NLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 163 ~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.|+++|||+|.|+.-..+ . .+-+++-||.|+. .+.-++.++
T Consensus 86 ~VLDvG~GtGiLs~~Aa~----a----GA~~V~ave~s~~-~~~a~~~~~ 126 (376)
T 4hc4_A 86 TVLDVGAGTGILSIFCAQ----A----GARRVYAVEASAI-WQQAREVVR 126 (376)
T ss_dssp EEEEETCTTSHHHHHHHH----T----TCSEEEEEECSTT-HHHHHHHHH
T ss_pred EEEEeCCCccHHHHHHHH----h----CCCEEEEEeChHH-HHHHHHHHH
Confidence 799999999988643222 1 1237889999984 444444443
No 247
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=76.46 E-value=5 Score=41.39 Aligned_cols=59 Identities=17% Similarity=0.147 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 142 GEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 142 Ge~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
.+.+..++++.+ +....-+|+|+|||+|+++.-+.+. ..+++-||+|+.+-+.-++++.
T Consensus 271 ~e~l~~~~~~~l---~~~~~~~VLDlgcG~G~~~~~la~~---------~~~V~gvD~s~~al~~A~~n~~ 329 (433)
T 1uwv_A 271 NQKMVARALEWL---DVQPEDRVLDLFCGMGNFTLPLATQ---------AASVVGVEGVPALVEKGQQNAR 329 (433)
T ss_dssp HHHHHHHHHHHH---TCCTTCEEEEESCTTTTTHHHHHTT---------SSEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh---cCCCCCEEEECCCCCCHHHHHHHhh---------CCEEEEEeCCHHHHHHHHHHHH
Confidence 444555555443 3223358999999999999877542 2378999999998777666553
No 248
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=75.53 E-value=4 Score=40.36 Aligned_cols=49 Identities=8% Similarity=0.113 Sum_probs=34.1
Q ss_pred HHHHHHcCCC-CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHH
Q 011546 150 MCLWEQMGQP-NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL 206 (483)
Q Consensus 150 ~~~w~~~g~p-~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~ 206 (483)
...++.++.. ...+++++|||+|.++.-+++. ..-+++=||+|+.+-+.
T Consensus 74 ~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~--------ga~~V~aVDvs~~mL~~ 123 (291)
T 3hp7_A 74 EKALAVFNLSVEDMITIDIGASTGGFTDVMLQN--------GAKLVYAVDVGTNQLVW 123 (291)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT--------TCSEEEEECSSSSCSCH
T ss_pred HHHHHhcCCCccccEEEecCCCccHHHHHHHhC--------CCCEEEEEECCHHHHHH
Confidence 3445555543 3459999999999998776542 12378899999986443
No 249
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=74.60 E-value=3.8 Score=39.56 Aligned_cols=43 Identities=21% Similarity=0.181 Sum_probs=32.3
Q ss_pred CCcEEEEEcCCcchhHHHHHHHH---hc-CcCc-cccceEEEEecChh
Q 011546 160 NRVNLVELGPGRGTLMADLLRGA---SK-FKNF-TESLHIHLVECSPT 202 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l---~~-~p~~-~~~l~y~iVE~Sp~ 202 (483)
..++|+|+|.|+|..+.-+++.+ +. .|+- ...++|+-||..|.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~ 107 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPL 107 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcC
Confidence 35799999999999998888876 32 4421 12478999999883
No 250
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=74.50 E-value=2.2 Score=42.22 Aligned_cols=48 Identities=17% Similarity=0.160 Sum_probs=38.0
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 159 p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
+.+-+|+++|||.|-|+.-+.. .....+|+.+++++.+-+.=++++..
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~-------~~p~a~y~a~DId~~~le~a~~~l~~ 178 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMG-------LPAETVYIASDIDARLVGFVDEALTR 178 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTT-------CCTTCEEEEEESBHHHHHHHHHHHHH
T ss_pred CCCceeeeeccCccHHHHHHHh-------hCCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 3356999999999998876532 22456999999999999998888754
No 251
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=74.48 E-value=6.2 Score=43.94 Aligned_cols=42 Identities=24% Similarity=0.467 Sum_probs=30.9
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCc------CccccceEEEEecChh
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFK------NFTESLHIHLVECSPT 202 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p------~~~~~l~y~iVE~Sp~ 202 (483)
...|+++|||||-|..-.+++.+... ....+.+++-||.||.
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~ 457 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPN 457 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChH
Confidence 46899999999999877777764211 1224568999999984
No 252
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=74.30 E-value=2.4 Score=40.93 Aligned_cols=43 Identities=19% Similarity=0.205 Sum_probs=33.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+|+|||+|.++.-+.+.. .. +++-||+||.+-+.-++++.
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~-------~~-~V~~vD~s~~~~~~a~~n~~ 169 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYG-------KA-KVIAIEKDPYTFKFLVENIH 169 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHT-------CC-EEEEECCCHHHHHHHHHHHH
T ss_pred CEEEEecccCCHHHHHHHHhC-------CC-EEEEEECCHHHHHHHHHHHH
Confidence 489999999999998876531 11 68999999998777666654
No 253
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=73.30 E-value=6.9 Score=40.49 Aligned_cols=42 Identities=12% Similarity=0.249 Sum_probs=33.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+|+|||+|+++.-+.+. ..+++-||+|+.+.+.-++++.
T Consensus 292 ~~VLDlgcG~G~~sl~la~~---------~~~V~gvD~s~~ai~~A~~n~~ 333 (425)
T 2jjq_A 292 EKILDMYSGVGTFGIYLAKR---------GFNVKGFDSNEFAIEMARRNVE 333 (425)
T ss_dssp SEEEEETCTTTHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEeeccchHHHHHHHHc---------CCEEEEEECCHHHHHHHHHHHH
Confidence 48999999999998876542 1278999999998877666654
No 254
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=71.55 E-value=4.4 Score=39.48 Aligned_cols=57 Identities=14% Similarity=0.092 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 144 MVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 144 ~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
.|...++..+ ..|. -.|++++||+||++.-.++. .-+++-||++|.+.+.-++++..
T Consensus 223 ~l~~~~i~~~---~~~~-~~vlD~f~GsGt~~~~a~~~---------g~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 223 ELAERLVRMF---SFVG-DVVLDPFAGTGTTLIAAARW---------GRRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp HHHHHHHHHH---CCTT-CEEEETTCTTTHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh---CCCC-CEEEECCCCCCHHHHHHHHc---------CCeEEEEeCCHHHHHHHHHHHHH
Confidence 4444444443 2333 38999999999998876542 12789999999999888888754
No 255
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=70.78 E-value=13 Score=40.90 Aligned_cols=67 Identities=16% Similarity=0.130 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhc-CcCccc-------------------------------
Q 011546 143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASK-FKNFTE------------------------------- 190 (483)
Q Consensus 143 e~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~-~p~~~~------------------------------- 190 (483)
|.||..++.+ .+.+....|++.+||+||++--......+ .|.+..
T Consensus 176 e~LAa~ll~~---~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 176 ETLAAAIVMR---SGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp HHHHHHHHHH---TTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh---hCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 5566665543 34444458999999999998766554432 232211
Q ss_pred ---cceEEEEecChhhHHHHHHhcc
Q 011546 191 ---SLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 191 ---~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..+++-+|++|.+-+.-++++.
T Consensus 253 ~~~~~~i~G~Did~~av~~A~~N~~ 277 (703)
T 3v97_A 253 AEYSSHFYGSDSDARVIQRARTNAR 277 (703)
T ss_dssp HHCCCCEEEEESCHHHHHHHHHHHH
T ss_pred ccCCccEEEEECCHHHHHHHHHHHH
Confidence 1478999999999888777664
No 256
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=70.03 E-value=7.7 Score=38.09 Aligned_cols=45 Identities=11% Similarity=0.038 Sum_probs=35.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+|+|||+|..+..+++.+. ...+++-||+|+...+.-++++.
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~------~~~~v~avD~s~~~l~~a~~~~~ 164 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMR------NDGVIYAFDVDENRLRETRLNLS 164 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTT------TCSEEEEECSCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCCHHHHHHHHHhC------CCCEEEEEcCCHHHHHHHHHHHH
Confidence 5899999999999998876542 22478999999998777666664
No 257
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=67.23 E-value=7.3 Score=39.11 Aligned_cols=57 Identities=19% Similarity=0.193 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 143 e~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+.+..|+.+... .. .-+|+|+|||+|+++.-+.+ . .-+++-||+|+..-+.-++++.
T Consensus 200 ~~l~~~~~~~~~---~~-~~~vLDl~cG~G~~~l~la~---~------~~~V~gvd~~~~ai~~a~~n~~ 256 (369)
T 3bt7_A 200 IQMLEWALDVTK---GS-KGDLLELYCGNGNFSLALAR---N------FDRVLATEIAKPSVAAAQYNIA 256 (369)
T ss_dssp HHHHHHHHHHTT---TC-CSEEEEESCTTSHHHHHHGG---G------SSEEEEECCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh---cC-CCEEEEccCCCCHHHHHHHh---c------CCEEEEEECCHHHHHHHHHHHH
Confidence 445555554432 21 24799999999999875432 1 1278999999998777666553
No 258
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=66.32 E-value=11 Score=38.72 Aligned_cols=77 Identities=12% Similarity=0.006 Sum_probs=52.1
Q ss_pred CCCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHH
Q 011546 126 GAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQK 205 (483)
Q Consensus 126 G~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~ 205 (483)
|+.+.|| ...+-+.+.+...++..+.+...+ ..+|++++||+|.++.-++...+ .+-+++.||+||...+
T Consensus 22 ~~~~~Ff---n~~~~~nR~l~~~~~~~~~~~~~~-g~~VLDlfaGtG~~sl~aa~~~~------ga~~V~avDi~~~av~ 91 (392)
T 3axs_A 22 SDMPVFY---NPRMRVNRDLAVLGLEYLCKKLGR-PVKVADPLSASGIRAIRFLLETS------CVEKAYANDISSKAIE 91 (392)
T ss_dssp TTCCSSC---CGGGHHHHHHHHHHHHHHHHHHCS-CEEEEESSCTTSHHHHHHHHHCS------CEEEEEEECSCHHHHH
T ss_pred CCCCEEE---cCCcHHHHHHHHHHHHHHhhccCC-CCEEEECCCcccHHHHHHHHhCC------CCCEEEEEECCHHHHH
Confidence 5567888 334566777665555555331011 25899999999999877765321 1237899999999988
Q ss_pred HHHHhcc
Q 011546 206 LQHHNLK 212 (483)
Q Consensus 206 ~Q~~~L~ 212 (483)
.-+++++
T Consensus 92 ~~~~N~~ 98 (392)
T 3axs_A 92 IMKENFK 98 (392)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8777765
No 259
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=64.77 E-value=10 Score=38.79 Aligned_cols=67 Identities=16% Similarity=0.135 Sum_probs=45.5
Q ss_pred CCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHH
Q 011546 128 EGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ 207 (483)
Q Consensus 128 ~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q 207 (483)
.|-|+.-.+.|++...++ +....-+|+|+|||.|..+..++... + ..+++-+|+|+...+.-
T Consensus 225 ~G~~~~qd~~s~~~~~~l-----------~~~~g~~VLDlgaG~G~~t~~la~~~---~----~~~v~a~D~~~~~l~~~ 286 (429)
T 1sqg_A 225 DGWVTVQDASAQGCMTWL-----------APQNGEHILDLCAAPGGKTTHILEVA---P----EAQVVAVDIDEQRLSRV 286 (429)
T ss_dssp GTSEEECCHHHHTHHHHH-----------CCCTTCEEEEESCTTCHHHHHHHHHC---T----TCEEEEEESSTTTHHHH
T ss_pred CCCeEeeCHHHHHHHHHc-----------CCCCcCeEEEECCCchHHHHHHHHHc---C----CCEEEEECCCHHHHHHH
Confidence 455665555555543332 22223489999999999999887643 2 14789999999987776
Q ss_pred HHhcc
Q 011546 208 HHNLK 212 (483)
Q Consensus 208 ~~~L~ 212 (483)
++++.
T Consensus 287 ~~~~~ 291 (429)
T 1sqg_A 287 YDNLK 291 (429)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66664
No 260
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=64.73 E-value=9.1 Score=37.95 Aligned_cols=62 Identities=18% Similarity=0.318 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 139 ~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-.|=|||+.--+. -.|.+-+|+=||.|.|..++.+|+. + .-.++.+||+.|..-+.-++.|.
T Consensus 67 ~~YhE~l~h~~l~-----~~p~pk~VLIiGgGdG~~~revlk~----~---~v~~v~~VEID~~Vv~~a~~~lp 128 (294)
T 3o4f_A 67 FIYHEMMTHVPLL-----AHGHAKHVLIIGGGDGAMLREVTRH----K---NVESITMVEIDAGVVSFCRQYLP 128 (294)
T ss_dssp HHHHHHHHHHHHH-----HSSCCCEEEEESCTTSHHHHHHHTC----T---TCCEEEEEESCHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHh-----hCCCCCeEEEECCCchHHHHHHHHc----C---CcceEEEEcCCHHHHHHHHhcCc
Confidence 4677887764332 2345569999999999999888753 2 12379999999999999888774
No 261
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=62.90 E-value=7.7 Score=39.10 Aligned_cols=42 Identities=14% Similarity=0.120 Sum_probs=33.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+|+|||+|+++..+... ..+++-||+|+...+.-++++.
T Consensus 211 ~~VLDlg~G~G~~~~~la~~---------~~~v~~vD~s~~~~~~a~~n~~ 252 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALG---------FREVVAVDSSAEALRRAEENAR 252 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHH---------EEEEEEEESCHHHHHHHHHHHH
T ss_pred CeEEEeeeccCHHHHHHHHh---------CCEEEEEECCHHHHHHHHHHHH
Confidence 58999999999999888653 1378999999998777666654
No 262
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=62.36 E-value=16 Score=37.06 Aligned_cols=61 Identities=11% Similarity=0.055 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 140 MFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 140 ~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
-+.+.+..-++..+ ...+|+|+|||+|.++.-++..+ + ..+++.||+|+...+.-++++..
T Consensus 33 ~~nr~l~~~~l~~~------~~~~VLDl~aGtG~~~l~~a~~~---~----~~~V~avDi~~~av~~a~~N~~~ 93 (378)
T 2dul_A 33 ALNRDIVVVLLNIL------NPKIVLDALSATGIRGIRFALET---P----AEEVWLNDISEDAYELMKRNVML 93 (378)
T ss_dssp HHHHHHHHHHHHHH------CCSEEEESSCTTSHHHHHHHHHS---S----CSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc------CCCEEEECCCchhHHHHHHHHhC---C----CCeEEEEECCHHHHHHHHHHHHH
Confidence 44555544444433 12489999999999998876542 2 23689999999998887777643
No 263
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=61.86 E-value=8.3 Score=39.11 Aligned_cols=43 Identities=9% Similarity=0.091 Sum_probs=33.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+++|||+|+++..++.. ..-+++-||+|+..-+.-++++.
T Consensus 214 ~~VLDl~cGtG~~sl~la~~--------ga~~V~~vD~s~~al~~A~~N~~ 256 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMG--------GAMATTSVDLAKRSRALSLAHFE 256 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHT--------TBSEEEEEESCTTHHHHHHHHHH
T ss_pred CeEEEEeeccCHHHHHHHHC--------CCCEEEEEECCHHHHHHHHHHHH
Confidence 48999999999998877541 11278999999998777666654
No 264
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=60.91 E-value=10 Score=36.55 Aligned_cols=42 Identities=19% Similarity=0.260 Sum_probs=32.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+++|||.|+.+.-+.+. ..+++.||.||.+.+.-++.+.
T Consensus 90 ~~VLDl~~G~G~dal~lA~~---------g~~V~~vE~~~~~~~l~~~~l~ 131 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV---------GCRVRMLERNPVVAALLDDGLA 131 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH---------TCCEEEEECCHHHHHHHHHHHH
T ss_pred CEEEEcCCcCCHHHHHHHHc---------CCEEEEEECCHHHHHHHHHHHH
Confidence 58999999999988776552 1269999999987666555553
No 265
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=60.06 E-value=24 Score=36.95 Aligned_cols=45 Identities=16% Similarity=0.140 Sum_probs=35.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+++|||.|..+..+...+.. .-+++-||+|+...+.-++++.
T Consensus 107 ~~VLDlcaGpGgkt~~lA~~~~~------~g~V~AvDis~~rl~~~~~n~~ 151 (456)
T 3m4x_A 107 EKVLDLCAAPGGKSTQLAAQMKG------KGLLVTNEIFPKRAKILSENIE 151 (456)
T ss_dssp CEEEESSCTTCHHHHHHHHHHTT------CSEEEEECSSHHHHHHHHHHHH
T ss_pred CEEEEECCCcCHHHHHHHHHcCC------CCEEEEEeCCHHHHHHHHHHHH
Confidence 58999999999999888765532 2378899999988777666664
No 266
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=59.59 E-value=24 Score=37.05 Aligned_cols=80 Identities=15% Similarity=0.172 Sum_probs=51.7
Q ss_pred CcccCC-CCCCCC-----CCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCcc
Q 011546 116 AGFYIN-RDVFGA-----EGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFT 189 (483)
Q Consensus 116 ~GYY~~-~~~~G~-----~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~ 189 (483)
.|||-. ...+++ .|-|+---+.|++-..++ +....-+|+++|||.|..+..+...+.
T Consensus 62 ~g~~l~~~~~~~~~~~~~~G~~~vQd~ss~l~a~~L-----------~~~~g~~VLDlgaGpG~kt~~LA~~~~------ 124 (464)
T 3m6w_A 62 EGFYYPEEARPGPHPFFYAGLYYIQEPSAQAVGVLL-----------DPKPGERVLDLAAAPGGKTTHLAARMG------ 124 (464)
T ss_dssp EEEECCTTCCCSSSHHHHTTSEEECCTTTHHHHHHH-----------CCCTTCEEEESSCTTCHHHHHHHHHTT------
T ss_pred ceEEECCCCCcccChHHhCCeEEEECHHHHHHHHhc-----------CcCCCCEEEEEcCCcCHHHHHHHHhCC------
Confidence 466654 233553 566665444444433322 222235899999999999998876543
Q ss_pred ccceEEEEecChhhHHHHHHhcc
Q 011546 190 ESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 190 ~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+..+++-||+|+...+.-++++.
T Consensus 125 ~~g~V~AvDis~~~l~~a~~n~~ 147 (464)
T 3m6w_A 125 GKGLLLANEVDGKRVRGLLENVE 147 (464)
T ss_dssp TCSEEEEECSCHHHHHHHHHHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHHH
Confidence 22378899999998887777764
No 267
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=58.22 E-value=23 Score=35.38 Aligned_cols=43 Identities=14% Similarity=0.152 Sum_probs=33.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+++| |+|.++.-+.+. .+ ..+++.||+||.+-+.-++++.
T Consensus 174 ~~VLDlG-G~G~~~~~la~~---~~----~~~v~~vDi~~~~l~~a~~~~~ 216 (373)
T 2qm3_A 174 KDIFVLG-DDDLTSIALMLS---GL----PKRIAVLDIDERLTKFIEKAAN 216 (373)
T ss_dssp CEEEEES-CTTCHHHHHHHH---TC----CSEEEEECSCHHHHHHHHHHHH
T ss_pred CEEEEEC-CCCHHHHHHHHh---CC----CCEEEEEECCHHHHHHHHHHHH
Confidence 5999999 999998776432 11 2379999999999887777664
No 268
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=57.46 E-value=10 Score=38.40 Aligned_cols=43 Identities=14% Similarity=0.169 Sum_probs=33.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+|+|||+|+++..+.+. ...+++-||+|+...+.-++++.
T Consensus 222 ~~VLDl~cG~G~~sl~la~~--------g~~~V~~vD~s~~al~~a~~n~~ 264 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMG--------GCSQVVSVDTSQEALDIARQNVE 264 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHT--------TCSEEEEEESCHHHHHHHHHHHH
T ss_pred CeEEEeeccCCHHHHHHHHC--------CCCEEEEEECCHHHHHHHHHHHH
Confidence 48999999999999887652 12378999999988777666654
No 269
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=57.27 E-value=9.6 Score=36.70 Aligned_cols=32 Identities=25% Similarity=0.221 Sum_probs=24.5
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChh
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT 202 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (483)
.-+|+++|||+|.++.-+++. -+++-||+||.
T Consensus 75 g~~VLDlGcGtG~~s~~la~~----------~~V~gvD~s~m 106 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASR----------PHVMDVRAYTL 106 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTS----------TTEEEEEEECC
T ss_pred CCEEEEeCcCCCHHHHHHHHc----------CcEEEEECchh
Confidence 358999999999987655431 26888999983
No 270
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=56.85 E-value=9.1 Score=36.70 Aligned_cols=34 Identities=18% Similarity=0.135 Sum_probs=26.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhH
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQ 204 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr 204 (483)
-+|+|+|||+|.++.-+.+. ..+++.||+||.+.
T Consensus 85 ~~VLDlgcG~G~~a~~lA~~---------g~~V~~vD~s~~~~ 118 (258)
T 2r6z_A 85 PTVWDATAGLGRDSFVLASL---------GLTVTAFEQHPAVA 118 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHT---------TCCEEEEECCHHHH
T ss_pred CeEEEeeCccCHHHHHHHHh---------CCEEEEEECChhhh
Confidence 48999999999988766441 12689999999443
No 271
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=54.65 E-value=11 Score=38.07 Aligned_cols=43 Identities=12% Similarity=0.060 Sum_probs=33.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+|+|||+|+++..+... ...+++-||+|+...+.-++++.
T Consensus 219 ~~VLDl~~G~G~~~~~la~~--------g~~~v~~vD~s~~~l~~a~~n~~ 261 (396)
T 2as0_A 219 DRVLDVFTYTGGFAIHAAIA--------GADEVIGIDKSPRAIETAKENAK 261 (396)
T ss_dssp CEEEETTCTTTHHHHHHHHT--------TCSEEEEEESCHHHHHHHHHHHH
T ss_pred CeEEEecCCCCHHHHHHHHC--------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 48999999999998877642 12378999999998777666654
No 272
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=53.13 E-value=8.7 Score=38.07 Aligned_cols=41 Identities=20% Similarity=0.312 Sum_probs=32.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+++|||+|.++.- ++ ...+++-||+||...+.-++++.
T Consensus 197 ~~VLDlg~G~G~~~l~-a~---------~~~~V~~vD~s~~ai~~a~~n~~ 237 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CK---------NAKKIYAIDINPHAIELLKKNIK 237 (336)
T ss_dssp CEEEETTCTTSHHHHH-TT---------TSSEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEccCccCHHHHh-cc---------CCCEEEEEECCHHHHHHHHHHHH
Confidence 4899999999998766 43 12378999999998877776664
No 273
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=52.84 E-value=11 Score=36.48 Aligned_cols=32 Identities=22% Similarity=0.270 Sum_probs=24.7
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChh
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT 202 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (483)
.-+|+++|||+|.++.-+++. -+++-||+||.
T Consensus 83 g~~VLDlGcGtG~~s~~la~~----------~~V~gVD~s~m 114 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQ----------PNVREVKAYTL 114 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTS----------TTEEEEEEECC
T ss_pred CCEEEEeccCCCHHHHHHHHc----------CCEEEEECchh
Confidence 358999999999987665431 26888999993
No 274
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=52.78 E-value=18 Score=37.34 Aligned_cols=45 Identities=16% Similarity=0.090 Sum_probs=35.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+|+|||.|..+..+...+. +..+++-+|+|+...+.-++++.
T Consensus 261 ~~VLDlgaG~G~~t~~la~~~~------~~~~v~a~D~s~~~l~~~~~~~~ 305 (450)
T 2yxl_A 261 ETVVDLAAAPGGKTTHLAELMK------NKGKIYAFDVDKMRMKRLKDFVK 305 (450)
T ss_dssp CEEEESSCTTCHHHHHHHHHTT------TCSEEEEECSCHHHHHHHHHHHH
T ss_pred CEEEEeCCCccHHHHHHHHHcC------CCCEEEEEcCCHHHHHHHHHHHH
Confidence 4899999999999999876542 22478999999998777666664
No 275
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=51.16 E-value=20 Score=37.37 Aligned_cols=38 Identities=18% Similarity=0.234 Sum_probs=27.8
Q ss_pred CCcEEEEEcCC------cchhHHHHHHHHhcCcCccccceEEEEecChhh
Q 011546 160 NRVNLVELGPG------RGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (483)
Q Consensus 160 ~~~~IvEiGaG------~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (483)
.+.+|+||||| +|..+..+++.. +| ..+++-||+||.+
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~--fP----~a~V~GVDiSp~m 259 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSF--FP----RGQIYGLDIMDKS 259 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHH--CT----TCEEEEEESSCCG
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHh--CC----CCEEEEEECCHHH
Confidence 34699999999 676666665432 33 3479999999997
No 276
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=48.90 E-value=15 Score=38.03 Aligned_cols=68 Identities=18% Similarity=0.219 Sum_probs=44.0
Q ss_pred ccCCC-ChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHH
Q 011546 131 FITSP-EVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHH 209 (483)
Q Consensus 131 FiTSp-eIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~ 209 (483)
++|.. .+-|.=.+.+|.+....+. + .-+|+++|||.|..+.-+.+ . ..+++-||+||.+.+.-++
T Consensus 68 ~~p~~~~~eQat~e~vA~~~a~~l~----~-g~~VLDLgcG~G~~al~LA~----~-----g~~V~~VD~s~~~l~~Ar~ 133 (410)
T 3ll7_A 68 YIPSRLSLEQSSGAVTSSYKSRFIR----E-GTKVVDLTGGLGIDFIALMS----K-----ASQGIYIERNDETAVAARH 133 (410)
T ss_dssp CCCCHHHHHHSCCHHHHHHGGGGSC----T-TCEEEESSCSSSHHHHHHHT----T-----CSEEEEEESCHHHHHHHHH
T ss_pred ecCCCCChhhcCHHHHHHHHHHhcC----C-CCEEEEeCCCchHHHHHHHh----c-----CCEEEEEECCHHHHHHHHH
Confidence 44433 3444445666666443321 1 24899999999998764432 1 1379999999999888777
Q ss_pred hcc
Q 011546 210 NLK 212 (483)
Q Consensus 210 ~L~ 212 (483)
++.
T Consensus 134 N~~ 136 (410)
T 3ll7_A 134 NIP 136 (410)
T ss_dssp HHH
T ss_pred hHH
Confidence 664
No 277
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=48.16 E-value=24 Score=38.28 Aligned_cols=61 Identities=20% Similarity=0.073 Sum_probs=41.2
Q ss_pred HHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhc----CcCc-cccceEEEEecChhhHHHHHHhc
Q 011546 150 MCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASK----FKNF-TESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 150 ~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~----~p~~-~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
-+.|+..+. ..++|+|+|=|+|.-..-.+++++. .|.- ..+++|+-+|..|--++.-++.|
T Consensus 49 ~~~~~~~~~-~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~ 114 (689)
T 3pvc_A 49 PARFASHPQ-QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAH 114 (689)
T ss_dssp THHHHHCCS-SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHH
T ss_pred HHHHhhCCC-CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHH
Confidence 345554333 3599999999999988888888743 3332 24689999999874444433333
No 278
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=47.72 E-value=44 Score=32.69 Aligned_cols=46 Identities=15% Similarity=0.288 Sum_probs=33.6
Q ss_pred cEEEEEcCCcch--hHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 162 VNLVELGPGRGT--LMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 162 ~~IvEiGaG~Gt--La~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
-+|+++|||.|| ....+++.. .|+ .+++-|+.||.+-+.-+++|..
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~--~P~----arVv~VD~sp~mLa~Ar~~l~~ 127 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSV--APE----SRVVYVDNDPIVLTLSQGLLAS 127 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHH--CTT----CEEEEEECCHHHHHTTHHHHCC
T ss_pred CEEEEeCCCCCcccHHHHHHHHH--CCC----CEEEEEeCChHHHHHHHHHhcc
Confidence 489999999854 445555432 343 4899999999998887777754
No 279
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=43.67 E-value=27 Score=35.65 Aligned_cols=42 Identities=7% Similarity=-0.050 Sum_probs=32.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+++|||+|.++..+++. .. +++-||+|+..-+.-++++.
T Consensus 216 ~~VLDlg~GtG~~sl~~a~~--------ga-~V~avDis~~al~~a~~n~~ 257 (393)
T 4dmg_A 216 ERVLDVYSYVGGFALRAARK--------GA-YALAVDKDLEALGVLDQAAL 257 (393)
T ss_dssp CEEEEESCTTTHHHHHHHHT--------TC-EEEEEESCHHHHHHHHHHHH
T ss_pred CeEEEcccchhHHHHHHHHc--------CC-eEEEEECCHHHHHHHHHHHH
Confidence 48999999999998887652 11 48899999998777666654
No 280
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=43.54 E-value=39 Score=37.22 Aligned_cols=43 Identities=19% Similarity=0.162 Sum_probs=33.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+++|||+|.++..++.. ..-+++-||+|+..-+.-++++.
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~--------ga~~V~aVD~s~~al~~a~~N~~ 583 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLG--------GARSTTTVDMSRTYLEWAERNLR 583 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHT--------TCSEEEEEESCHHHHHHHHHHHH
T ss_pred CcEEEeeechhHHHHHHHHC--------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 48999999999998776541 12368999999998877776664
No 281
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=42.47 E-value=20 Score=35.03 Aligned_cols=43 Identities=19% Similarity=0.169 Sum_probs=33.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-.|+++|||.|.++.-++.. .+.+++-||+||..-+.-+++++
T Consensus 127 ~~VlD~~aG~G~~~i~~a~~--------g~~~V~avD~np~a~~~~~~N~~ 169 (278)
T 3k6r_A 127 ELVVDMFAGIGHLSLPIAVY--------GKAKVIAIEKDPYTFKFLVENIH 169 (278)
T ss_dssp CEEEETTCTTTTTTHHHHHH--------TCCEEEEECCCHHHHHHHHHHHH
T ss_pred CEEEEecCcCcHHHHHHHHh--------cCCeEEEEECCHHHHHHHHHHHH
Confidence 38999999999998776542 12378999999988777666654
No 282
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=41.81 E-value=28 Score=32.91 Aligned_cols=57 Identities=11% Similarity=-0.056 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 144 MVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 144 ~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
.|...++... ..|. -.|++..||+||.+.-.++. .-+++.||++|...+.-++++..
T Consensus 200 ~l~~~~i~~~---~~~~-~~vlD~f~GsGtt~~~a~~~---------gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 200 DLIERIIRAS---SNPN-DLVLDCFMGSGTTAIVAKKL---------GRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp HHHHHHHHHH---CCTT-CEEEESSCTTCHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHh---CCCC-CEEEECCCCCCHHHHHHHHc---------CCeEEEEeCCHHHHHHHHHHHHh
Confidence 3444444443 2333 48999999999988876542 12789999999998888888753
No 283
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=41.16 E-value=32 Score=35.29 Aligned_cols=44 Identities=16% Similarity=0.319 Sum_probs=36.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
+-+|+=+|.|.|..++.+|+. |. -++.+||+.|..-+.-++.|.
T Consensus 206 pkrVLIIGgGdG~~~revlkh----~~----~~V~~VEIDp~VVe~ar~yfp 249 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKL----KP----KMVTMVEIDQMVIDGCKKYMR 249 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTT----CC----SEEEEEESCHHHHHHHHHHCC
T ss_pred CCeEEEECCCcHHHHHHHHhc----CC----ceeEEEccCHHHHHHHHhhch
Confidence 458999999999999988753 31 278999999999999888774
No 284
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=40.84 E-value=30 Score=37.32 Aligned_cols=55 Identities=16% Similarity=0.128 Sum_probs=38.0
Q ss_pred HHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhc----CcCc-cccceEEEEecChhhHHH
Q 011546 151 CLWEQMGQPNRVNLVELGPGRGTLMADLLRGASK----FKNF-TESLHIHLVECSPTLQKL 206 (483)
Q Consensus 151 ~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~----~p~~-~~~l~y~iVE~Sp~Lr~~ 206 (483)
+.|+..+. ..++|+|+|=|+|..+.-.++++++ .|+- ..+++|+-+|.-|--++.
T Consensus 58 ~~~~~~~~-~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~ 117 (676)
T 3ps9_A 58 VRFPEHPH-PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRAD 117 (676)
T ss_dssp HHGGGCSS-SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHH
T ss_pred HHHHhCCC-CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHH
Confidence 33443332 3589999999999988888888753 3432 346889999995544433
No 285
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=40.71 E-value=45 Score=34.92 Aligned_cols=45 Identities=16% Similarity=0.197 Sum_probs=35.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
-+|+++|||.|..+..+.+.+. +..+++-+|+|+...+.-++++.
T Consensus 119 ~~VLDl~aGpG~kt~~lA~~~~------~~g~V~avDis~~~l~~~~~n~~ 163 (479)
T 2frx_A 119 QRVMDVAAAPGSKTTQISARMN------NEGAILANEFSASRVKVLHANIS 163 (479)
T ss_dssp SEEEESSCTTSHHHHHHHHHTT------TCSEEEEECSSHHHHHHHHHHHH
T ss_pred CEEEEeCCCCCHHHHHHHHhCC------CCCEEEEEECCHHHHHHHHHHHH
Confidence 4899999999999998876542 22378899999998877777664
No 286
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=39.95 E-value=48 Score=32.54 Aligned_cols=46 Identities=9% Similarity=-0.003 Sum_probs=36.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
-+|+++|||.|..+..++..+. ..-+++-+|+|+...+.-+++++.
T Consensus 104 ~~VLDlcaG~G~kt~~la~~~~------~~g~V~a~D~~~~~l~~~~~n~~r 149 (309)
T 2b9e_A 104 SHVIDACAAPGNKTSHLAALLK------NQGKIFAFDLDAKRLASMATLLAR 149 (309)
T ss_dssp CEEEESSCTTCHHHHHHHHHHT------TCSEEEEEESCHHHHHHHHHHHHH
T ss_pred CEEEEeCCChhHHHHHHHHHhC------CCCEEEEEeCCHHHHHHHHHHHHH
Confidence 4899999999999999887553 223789999999987777776653
No 287
>2ba3_A NIKA; dimer, bacterial conjugation, relaxase, DNA binding, ribbon- helix-helix, DNA binding protein; NMR {Plasmid R64}
Probab=31.03 E-value=41 Score=23.82 Aligned_cols=28 Identities=11% Similarity=0.198 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHHhhcCCcccHHHHHHHhhc
Q 011546 83 ESELVKHLKGIIKFRGGPISVAEYMEEVLT 112 (483)
Q Consensus 83 ~~~L~~~i~~~I~~~~GpIsf~~FM~~aLY 112 (483)
..+-.+.|.+..+.. | +++++||..++.
T Consensus 23 t~eE~~~l~~~A~~~-g-~s~SeyiR~~~l 50 (51)
T 2ba3_A 23 SPVEDETIRKKAEDS-G-LTVSAYIRNAAL 50 (51)
T ss_dssp CHHHHHHHHHHHHHH-T-CCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh-C-CCHHHHHHHHHc
Confidence 366777888888888 5 899999999874
No 288
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=30.23 E-value=41 Score=32.88 Aligned_cols=28 Identities=25% Similarity=0.168 Sum_probs=21.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEec
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVEC 199 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~ 199 (483)
-+|+++|||+|.++.-+++. -+++-||+
T Consensus 84 ~~VLDlGcG~G~~s~~la~~----------~~V~gvD~ 111 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGL----------KNVREVKG 111 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTS----------TTEEEEEE
T ss_pred CEEEEEcCCCCHHHHHHHhc----------CCEEEEec
Confidence 59999999999987766542 14666777
No 289
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=30.08 E-value=68 Score=31.86 Aligned_cols=68 Identities=15% Similarity=0.090 Sum_probs=40.6
Q ss_pred CCCccCCCChhHHHHHHHHHHH-----HHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHh-cCcCccccceEEEEecCh
Q 011546 128 EGDFITSPEVSQMFGEMVGVWA-----MCLWEQMGQPNRVNLVELGPGRGTLMADLLRGAS-KFKNFTESLHIHLVECSP 201 (483)
Q Consensus 128 ~GDFiTSpeIs~~FGe~Ia~~i-----~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~-~~p~~~~~l~y~iVE~Sp 201 (483)
-||-|=|..-+.+ .|+.-++| .+.|... ..++|+|+|=|+|..+.-.++.+. ..|. .+++|+-+|.-|
T Consensus 63 f~e~YhS~~~GAl-~Es~hVFi~~~~L~~r~~~~---~~~~IlE~GFGTGLNfl~t~~~~~~~~~~--~~L~~iS~Ek~p 136 (308)
T 3vyw_A 63 YGEPYHSQTAGAI-RESLYKFVRPSRILEKAKER---KVIRILDVGFGLGYNLAVALKHLWEVNPK--LRVEIISFEKEL 136 (308)
T ss_dssp TTEESSCTTTCHH-HHHHHHTHHHHTHHHHHHHC---SEEEEEEECCTTSHHHHHHHHHHHHHCTT--CEEEEEEEESSC
T ss_pred cCCccCCCCCcHH-HHHHHHHhccCCchHHhcCC---CCcEEEEeCCCccHHHHHHHHHHHHhCCC--cceEEEeecHHH
Confidence 3577777543322 34444443 3344432 358999999999997766666553 3454 346777777644
No 290
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=29.10 E-value=98 Score=28.63 Aligned_cols=42 Identities=21% Similarity=0.361 Sum_probs=30.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (483)
Q Consensus 162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~ 213 (483)
-+|+|+|+|--|+.. ...+ .-+++-||.++.+.+.-++.+..
T Consensus 32 ~~VLEiGtGySTl~l------A~~~----~g~VvtvE~d~~~~~~ar~~l~~ 73 (202)
T 3cvo_A 32 EVILEYGSGGSTVVA------AELP----GKHVTSVESDRAWARMMKAWLAA 73 (202)
T ss_dssp SEEEEESCSHHHHHH------HTST----TCEEEEEESCHHHHHHHHHHHHH
T ss_pred CEEEEECchHHHHHH------HHcC----CCEEEEEeCCHHHHHHHHHHHHH
Confidence 389999986433221 1111 24899999999999998888864
No 291
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=27.26 E-value=17 Score=45.85 Aligned_cols=49 Identities=16% Similarity=0.233 Sum_probs=36.0
Q ss_pred CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (483)
Q Consensus 161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L 211 (483)
.++|+|+|+|+|.+...||..+...|..+ .+|.+.++|+.+-+.-++++
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~--~~yt~td~s~~~~~~a~~~f 1289 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMD--LDYTATDRNPQALEAAQAKL 1289 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCE--EEEEEECSSSSSTTTTTTTH
T ss_pred CceEEEECCCccHHHHHHHHhhcccCccc--ceEEEecCChHHHHHHHHHh
Confidence 57999999999999999988875433212 38999999987654444443
No 292
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=26.71 E-value=97 Score=31.46 Aligned_cols=48 Identities=15% Similarity=0.182 Sum_probs=34.4
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (483)
Q Consensus 160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~ 212 (483)
..-.++++||+.|..+.-++.. ..+ ...+++.+|++|...+.-++++.
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~--~~~---~~~~V~afEP~p~~~~~L~~n~~ 273 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGV--TKG---KFERVWMIEPDRINLQTLQNVLR 273 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHH--HTS---CCSEEEEECCCHHHHHHHHHHHH
T ss_pred CCCEEEECCCCcCHHHHHHHHH--hcC---CCCEEEEEcCCHHHHHHHHHHHH
Confidence 3458999999999977655422 122 22379999999998887776664
No 293
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=25.94 E-value=1e+02 Score=30.62 Aligned_cols=55 Identities=16% Similarity=0.231 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChh
Q 011546 145 VGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT 202 (483)
Q Consensus 145 Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (483)
-.++++....+.|....-.||=+|||.|+-..-+-+ .+|+...++++++|++.|.
T Consensus 45 sEIeFLt~~~~~~~~~~~~VVYVGSApG~HL~~L~~---~fp~~f~~ikWvLiDPap~ 99 (307)
T 3mag_A 45 GELFFLSKLQRHGILDGATVVYIGSAPGTHIRYLRD---HFYNLGVIIKWMLIDGRHH 99 (307)
T ss_dssp HHHHHHHHHHHTTCSTTCEEEEESCCSCHHHHHHHH---HHHHTTCCCEEEEEESSCC
T ss_pred HHHHHHHHHHhcCCCCCcEEEEecccCccHHHHHHH---hchhhCCCeEEEEEcCCcc
Confidence 345666666555554335999999999995444332 3555556789999998764
No 294
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=23.32 E-value=1e+02 Score=31.20 Aligned_cols=23 Identities=22% Similarity=0.338 Sum_probs=17.9
Q ss_pred CCCcEEEEEcCCcchhHHHHHHH
Q 011546 159 PNRVNLVELGPGRGTLMADLLRG 181 (483)
Q Consensus 159 p~~~~IvEiGaG~GtLa~DIL~~ 181 (483)
|.+++|+++|||+|..+.-++..
T Consensus 51 ~~~~~IaDlGCssG~Nt~~~v~~ 73 (374)
T 3b5i_A 51 PPPFTAVDLGCSSGANTVHIIDF 73 (374)
T ss_dssp CCCEEEEEETCCSSHHHHHHHHH
T ss_pred CCceEEEecCCCCChhHHHHHHH
Confidence 45799999999999877655443
No 295
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=22.27 E-value=75 Score=22.25 Aligned_cols=29 Identities=14% Similarity=0.214 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHHhhcCCcccHHHHHHHhhcC
Q 011546 83 ESELVKHLKGIIKFRGGPISVAEYMEEVLTN 113 (483)
Q Consensus 83 ~~~L~~~i~~~I~~~~GpIsf~~FM~~aLY~ 113 (483)
+.+|.+.|....+.. | +|.++||+.||-.
T Consensus 17 ~~el~~~l~~~a~~~-g-~s~s~~ir~ai~~ 45 (55)
T 2k9i_A 17 PQEWHDRLMEIAKEK-N-LTLSDVCRLAIKE 45 (55)
T ss_dssp CHHHHHHHHHHHHHH-T-CCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh-C-CCHHHHHHHHHHH
Confidence 478889998888888 5 7999999999854
Done!