Query         011546
Match_columns 483
No_of_seqs    201 out of 859
Neff          5.9 
Searched_HMMs 13730
Date          Mon Mar 25 10:23:52 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011546.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/011546hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1zkda1 c.66.1.52 (A:2-366) Hy 100.0 3.7E-93 2.7E-97  733.4  34.3  358   83-483     3-363 (365)
  2 d1qama_ c.66.1.24 (A:) rRNA ad  96.9  0.0011   8E-08   61.8   8.6   49  156-213    17-65  (235)
  3 d1wzna1 c.66.1.43 (A:1-251) Hy  96.8  0.0023 1.7E-07   58.1   9.5   56  148-212    29-84  (251)
  4 d1im8a_ c.66.1.14 (A:) Hypothe  96.7  0.0044 3.2E-07   55.8  11.2   60  148-213    28-87  (225)
  5 d1jqea_ c.66.1.19 (A:) Histami  96.7  0.0039 2.8E-07   58.1  10.8   52  160-213    40-92  (280)
  6 d1vl5a_ c.66.1.41 (A:) Hypothe  96.7  0.0025 1.8E-07   57.1   8.9   54  150-212     5-58  (231)
  7 d1wy7a1 c.66.1.32 (A:4-204) Hy  96.6  0.0044 3.2E-07   55.9  10.2   70  128-213    22-91  (201)
  8 d1ve3a1 c.66.1.43 (A:2-227) Hy  96.2  0.0083 6.1E-07   52.9   9.4   64  139-213    18-81  (226)
  9 d1yuba_ c.66.1.24 (A:) rRNA ad  96.0  0.0012 8.5E-08   62.0   2.5   65  123-209     5-69  (245)
 10 d1qyra_ c.66.1.24 (A:) High le  96.0  0.0028   2E-07   59.6   5.1   41  162-211    23-63  (252)
 11 d1zq9a1 c.66.1.24 (A:36-313) P  96.0   0.012 9.1E-07   55.8   9.8   49  156-213    17-65  (278)
 12 d1ne2a_ c.66.1.32 (A:) Hypothe  96.0   0.021 1.5E-06   51.5  10.9   69  128-212    24-92  (197)
 13 d1pjza_ c.66.1.36 (A:) Thiopur  95.9  0.0065 4.7E-07   52.2   7.0   57  148-213     8-64  (201)
 14 d1dusa_ c.66.1.4 (A:) Hypothet  95.9  0.0095 6.9E-07   52.7   7.9   48  156-212    48-95  (194)
 15 d2o57a1 c.66.1.18 (A:16-297) P  95.8    0.04 2.9E-06   51.0  12.6   51  154-212    61-111 (282)
 16 d1xtpa_ c.66.1.42 (A:) Hypothe  95.8   0.021 1.5E-06   52.8  10.5   54  151-212    84-137 (254)
 17 d2gh1a1 c.66.1.49 (A:13-293) M  95.8   0.012 8.9E-07   55.1   8.8   81  159-263    26-108 (281)
 18 d1i4wa_ c.66.1.24 (A:) Transcr  95.6  0.0098 7.1E-07   57.5   7.6   68  130-212    18-88  (322)
 19 d2ex4a1 c.66.1.42 (A:2-224) Ad  95.6   0.011 7.8E-07   53.1   7.2   46  160-213    60-105 (222)
 20 d2i6ga1 c.66.1.44 (A:1-198) Pu  95.6   0.029 2.1E-06   49.2  10.1   42  161-211    31-72  (198)
 21 d2avna1 c.66.1.41 (A:1-246) Hy  95.5   0.027   2E-06   50.0   9.8   58  144-211    27-84  (246)
 22 d1xxla_ c.66.1.41 (A:) Hypothe  95.5   0.015 1.1E-06   52.3   8.0   48  156-212    12-59  (234)
 23 d1p91a_ c.66.1.33 (A:) rRNA me  95.0   0.067 4.9E-06   49.5  11.0   45  160-211    84-128 (268)
 24 d2f8la1 c.66.1.45 (A:2-329) Hy  95.0   0.035 2.5E-06   52.8   9.2   76  127-211    91-166 (328)
 25 d1xvaa_ c.66.1.5 (A:) Glycine   95.0   0.056 4.1E-06   50.3  10.4   54  146-211    45-98  (292)
 26 d1dl5a1 c.66.1.7 (A:1-213) Pro  94.9   0.052 3.8E-06   48.8   9.8   54  154-213    69-122 (213)
 27 d1r18a_ c.66.1.7 (A:) Protein-  94.9   0.029 2.1E-06   51.3   7.9   91  111-212    41-131 (223)
 28 d1nkva_ c.66.1.21 (A:) Hypothe  94.9   0.078 5.7E-06   47.8  10.8   50  154-211    27-76  (245)
 29 d1zx0a1 c.66.1.16 (A:8-236) Gu  94.6   0.019 1.4E-06   52.1   5.8   44  161-212    54-97  (229)
 30 d2p7ia1 c.66.1.41 (A:22-246) H  94.6    0.07 5.1E-06   47.7   9.7   54  148-212    10-63  (225)
 31 d1i1na_ c.66.1.7 (A:) Protein-  94.5    0.03 2.2E-06   51.0   7.0   74  124-213    50-123 (224)
 32 d1yb2a1 c.66.1.13 (A:6-255) Hy  94.5   0.061 4.5E-06   50.0   9.1   54  154-213    79-132 (250)
 33 d2fk8a1 c.66.1.18 (A:22-301) M  94.2     0.1 7.5E-06   48.9  10.3   59  147-213    39-97  (280)
 34 d1qzza2 c.66.1.12 (A:102-357)   93.9   0.098 7.1E-06   48.1   9.4   49  156-212    77-125 (256)
 35 d1y8ca_ c.66.1.43 (A:) Putativ  93.9    0.05 3.6E-06   49.1   7.1   57  146-212    24-80  (246)
 36 d1u2za_ c.66.1.31 (A:) Catalyt  93.6   0.025 1.8E-06   56.5   4.8   68  138-212   194-261 (406)
 37 d2bzga1 c.66.1.36 (A:17-245) T  93.5    0.19 1.4E-05   44.9  10.3   47  157-212    42-88  (229)
 38 d1tw3a2 c.66.1.12 (A:99-351) C  93.5    0.19 1.4E-05   45.8  10.4   46  154-206    74-119 (253)
 39 d1i9ga_ c.66.1.13 (A:) Probabl  93.3   0.076 5.5E-06   49.8   7.4   53  155-213    91-143 (264)
 40 d1jg1a_ c.66.1.7 (A:) Protein-  93.1   0.076 5.5E-06   48.2   6.9   75  119-213    48-123 (215)
 41 d2b3ta1 c.66.1.30 (A:2-275) N5  93.0    0.15 1.1E-05   47.8   9.1   59  143-212    95-153 (274)
 42 d1o54a_ c.66.1.13 (A:) Hypothe  93.0   0.096   7E-06   48.9   7.6   53  155-213    98-150 (266)
 43 d2nxca1 c.66.1.39 (A:1-254) Pr  92.9     0.1 7.4E-06   48.4   7.7   51  152-212   113-163 (254)
 44 d1g8sa_ c.66.1.3 (A:) Fibrilla  92.6   0.059 4.3E-06   49.3   5.4   51  153-210    67-117 (230)
 45 d1g8aa_ c.66.1.3 (A:) Fibrilla  92.0   0.079 5.7E-06   48.4   5.5   58  149-212    62-119 (227)
 46 d1l3ia_ c.66.1.22 (A:) Precorr  91.8   0.097 7.1E-06   45.5   5.6   48  157-213    30-77  (186)
 47 d2okca1 c.66.1.45 (A:9-433) Ty  91.8    0.21 1.5E-05   49.2   8.8  107  127-257   140-252 (425)
 48 d1nw3a_ c.66.1.31 (A:) Catalyt  91.7    0.07 5.1E-06   51.2   4.8   60  147-213   138-197 (328)
 49 d1vbfa_ c.66.1.7 (A:) Protein-  91.6    0.17 1.3E-05   46.0   7.3   66  128-213    49-114 (224)
 50 d2b25a1 c.66.1.13 (A:6-329) Hy  91.5    0.16 1.2E-05   48.7   7.4   52  156-213    94-145 (324)
 51 d2cl5a1 c.66.1.1 (A:3-216) Cat  91.3    0.19 1.4E-05   45.1   7.3   66  135-213    38-103 (214)
 52 d1kpia_ c.66.1.18 (A:) CmaA2 {  91.0    0.71 5.2E-05   43.2  11.3   62  143-212    44-105 (291)
 53 d2g72a1 c.66.1.15 (A:18-280) P  90.9   0.062 4.5E-06   49.5   3.5   49  157-213    51-99  (263)
 54 d1nt2a_ c.66.1.3 (A:) Fibrilla  90.6    0.14 9.8E-06   46.0   5.5   49  156-211    52-100 (209)
 55 d1vlma_ c.66.1.41 (A:) Possibl  90.4    0.18 1.3E-05   43.7   6.1   35  162-209    38-72  (208)
 56 d1ri5a_ c.66.1.34 (A:) mRNA ca  90.2    0.27 1.9E-05   44.4   7.2   44  161-212    25-68  (252)
 57 d1ws6a1 c.66.1.46 (A:15-185) M  89.0    0.29 2.1E-05   42.1   6.2   66  133-213    20-85  (171)
 58 d2fcaa1 c.66.1.53 (A:10-213) t  87.3    0.36 2.6E-05   43.0   5.7   42  163-211    32-73  (204)
 59 d2avda1 c.66.1.1 (A:44-262) CO  86.9     0.5 3.7E-05   42.5   6.6   64  137-213    43-106 (219)
 60 d1kpga_ c.66.1.18 (A:) CmaA1 {  86.8     1.7 0.00012   40.4  10.6   62  143-212    45-106 (285)
 61 d2ih2a1 c.66.1.27 (A:21-243) D  86.6    0.45 3.2E-05   41.3   5.9   40  159-204    18-57  (223)
 62 d1yzha1 c.66.1.53 (A:8-211) tR  86.1    0.51 3.7E-05   41.9   6.1   37  163-206    34-70  (204)
 63 d2a14a1 c.66.1.15 (A:5-261) In  85.3    0.31 2.3E-05   43.4   4.2   59  147-213    35-96  (257)
 64 d2esra1 c.66.1.46 (A:28-179) P  84.7     0.5 3.6E-05   39.6   5.0   45  161-213    15-59  (152)
 65 d2fyta1 c.66.1.6 (A:238-548) P  84.1    0.53 3.8E-05   43.9   5.5   40  162-209    37-76  (311)
 66 d1oria_ c.66.1.6 (A:) Protein   83.9     1.5 0.00011   40.8   8.7   39  162-208    35-73  (316)
 67 d2h00a1 c.66.1.54 (A:5-254) Me  83.3     1.5 0.00011   39.8   8.2   59  148-213    47-107 (250)
 68 d1nv8a_ c.66.1.30 (A:) N5-glut  83.2     1.3 9.8E-05   41.0   7.9   59  143-212    96-154 (271)
 69 d1g6q1_ c.66.1.6 (1:) Arginine  83.2     1.7 0.00012   40.7   8.7   35  162-204    40-74  (328)
 70 d1susa1 c.66.1.1 (A:21-247) Ca  80.7     1.2 8.9E-05   40.1   6.3   46  162-213    61-106 (227)
 71 d1uira_ c.66.1.17 (A:) Spermid  78.7       1 7.4E-05   42.6   5.3   73  128-212    50-122 (312)
 72 d2ar0a1 c.66.1.45 (A:6-529) M.  76.4     1.8 0.00013   43.4   6.8   74  127-211   142-226 (524)
 73 d2fpoa1 c.66.1.46 (A:10-192) M  73.7     2.2 0.00016   36.6   5.7   65  133-212    23-87  (183)
 74 d1fp1d2 c.66.1.12 (D:129-372)   73.3     3.6 0.00027   37.0   7.4   60  134-200    50-114 (244)
 75 d1kyza2 c.66.1.12 (A:120-362)   71.3     4.6 0.00033   36.0   7.6   62  134-202    50-116 (243)
 76 d1inla_ c.66.1.17 (A:) Spermid  69.0     2.5 0.00018   39.6   5.3   62  139-212    73-134 (295)
 77 d1mjfa_ c.66.1.17 (A:) Putativ  67.2     2.4 0.00017   39.1   4.7   72  128-212    45-116 (276)
 78 d1iy9a_ c.66.1.17 (A:) Spermid  64.6     6.8 0.00049   35.9   7.4   73  128-212    48-120 (274)
 79 d2fhpa1 c.66.1.46 (A:1-182) Pu  62.6     3.3 0.00024   35.5   4.5   82  116-213     5-86  (182)
 80 d1xj5a_ c.66.1.17 (A:) Spermid  60.0     4.9 0.00036   37.2   5.5   62  139-212    64-125 (290)
 81 d2frna1 c.66.1.47 (A:19-278) H  58.3     4.3 0.00032   36.9   4.7   43  162-212   109-151 (260)
 82 d1m6ya2 c.66.1.23 (A:2-114,A:2  53.9      18  0.0013   31.1   7.8   45  162-213    25-69  (192)
 83 d2b2ca1 c.66.1.17 (A:3-314) Sp  52.2     7.3 0.00053   36.5   5.2   73  128-212    79-151 (312)
 84 d1fp2a2 c.66.1.12 (A:109-352)   51.0     8.3 0.00061   34.4   5.3   61  134-201    49-114 (244)
 85 d2o07a1 c.66.1.17 (A:16-300) S  51.0      17  0.0013   33.2   7.7   62  139-212    62-123 (285)
 86 d2ifta1 c.66.1.46 (A:11-193) P  50.8      11 0.00077   32.0   5.7   43  162-212    45-87  (183)
 87 d2igta1 c.66.1.51 (A:1-309) Pu  39.4      32  0.0024   31.7   7.6   54  148-212   122-175 (309)
 88 d2as0a2 c.66.1.51 (A:73-396) H  27.6      36  0.0026   31.2   5.7   43  162-212   147-189 (324)
 89 d2bm8a1 c.66.1.50 (A:2-233) Ce  25.1      57  0.0041   28.6   6.4   38  162-202    82-119 (232)
 90 d1af7a2 c.66.1.8 (A:92-284) Ch  24.4      88  0.0064   25.9   7.3   50  160-209    24-74  (193)
 91 d1wxxa2 c.66.1.51 (A:65-382) H  22.7      38  0.0028   31.0   4.8   42  162-212   147-188 (318)
 92 d1uwva2 c.66.1.40 (A:75-432) r  22.4      47  0.0034   30.2   5.4   58  142-211   197-254 (358)
 93 d1ksoa_ a.39.1.2 (A:) Calcycli  21.3      55   0.004   24.4   4.7   36   74-109    42-77  (93)
 94 d2py6a1 c.66.1.56 (A:14-408) M  20.2      60  0.0043   30.8   5.8   47  161-212   213-259 (395)

No 1  
>d1zkda1 c.66.1.52 (A:2-366) Hypothetical protein RPA4359 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=100.00  E-value=3.7e-93  Score=733.36  Aligned_cols=358  Identities=37%  Similarity=0.657  Sum_probs=316.4

Q ss_pred             hHHHHHHHHHHHhhcCCcccHHHHHHHhhcCCCCcccCCCCCCCCCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCc
Q 011546           83 ESELVKHLKGIIKFRGGPISVAEYMEEVLTNPKAGFYINRDVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRV  162 (483)
Q Consensus        83 ~~~L~~~i~~~I~~~~GpIsf~~FM~~aLY~P~~GYY~~~~~~G~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~  162 (483)
                      .++|.+.|+++|++. |||||++||++|||||++|||+++.+||++||||||||||++||++||+|+.++|+.++.|.++
T Consensus         3 ~~~L~~~i~~~i~~~-G~i~f~~fM~~~LY~p~~GYY~~~~~iG~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~~~~~   81 (365)
T d1zkda1           3 QTALATEIKRLIKAA-GPMPVWRYMELCLGHPEHGYYVTRDPLGREGDFTTSPEISQMFGELLGLWSASVWKAADEPQTL   81 (365)
T ss_dssp             SSHHHHHHHHHHHHH-CSEEHHHHHHHHHHCTTTCTTTCC--------CCSHHHHCHHHHHHHHHHHHHHHHHTTCCSSE
T ss_pred             ccHHHHHHHHHHHhc-CCccHHHHHHHHcCCCCccccCCCCCCCCCCCeECCCchHHHHHHHHHHHHHHHHHHhCCCccc
Confidence            368999999999998 9999999999999999999999888999999999999999999999999999999999999999


Q ss_pred             EEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcccccccCcCCcccceeeccCCCCceeecccc
Q 011546          163 NLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLAGTPVSWHAAL  242 (483)
Q Consensus       163 ~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~~~~~~~~~~~~~~~~~~~~~~~v~W~~sl  242 (483)
                      +|||+|||+|+||+|||++++..|.+++.++|++||+||.||+.|+++|+..                   .++.|+.++
T Consensus        82 ~ivE~GaG~G~La~dil~~l~~~~~~~~~~~~~~vE~s~~L~~~Q~~~l~~~-------------------~~i~w~~~~  142 (365)
T d1zkda1          82 RLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI-------------------RNIHWHDSF  142 (365)
T ss_dssp             EEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC-------------------SSEEEESSG
T ss_pred             eEEecCCcccHHHHhhhhhhcccccccccceEEEeccchhHHHHHHHHhccc-------------------ccceeccCh
Confidence            9999999999999999999998899999999999999999999999999742                   269999999


Q ss_pred             ccCCCCCCEEEEEecccccccceEEEEcCCeeEEEEEEEcCCCceEEEeCCCCChhhHHHHHHhhhhhcccCCCCcEEEE
Q 011546          243 EQVPSGFPTIIVAHEFYDALPVHQFQKTTRGWCEKLVDIAEDSSFRFVLSPQPTPATLFLLQRCKWAADKELEKLEHIEV  322 (483)
Q Consensus       243 ~~lp~~~~~iiiANEffDALPv~~f~~~~~~w~E~~V~~~~~~~f~~v~~p~~~~~~~~l~~~~~~~~~~~~~~g~~~Ei  322 (483)
                      +++|.. |+||||||||||||||+|++++++|+|++|++++++++.+...+...+.........    ....++|+++|+
T Consensus       143 ~~~~~~-~g~iiaNE~fDAlPv~~~~~~~~~~~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~e~  217 (365)
T d1zkda1         143 EDVPEG-PAVILANEYFDVLPIHQAIKRETGWHERVIEIGASGELVFGVAADPIPGFEALLPPL----ARLSPPGAVFEW  217 (365)
T ss_dssp             GGSCCS-SEEEEEESSGGGSCCEEEEEETTEEEEEEEEECTTSCEEEEECSSCCTTCGGGSCGG----GGGCCTTCEEEE
T ss_pred             hhcccC-CeEEEecccCccccceEEEEcCccceeeeeeecccceeEEeeccccchhHHhhhchh----hhccCCCccccc
Confidence            999986 999999999999999999999999999999998888888887766555321111111    123468999999


Q ss_pred             chhHHHHHHHHHHHhccCCeEEEEEeCCCCCC-cCCccceeccccccCCCCCCCccccccccCHHHHHHHHHHhcCceee
Q 011546          323 CAKAMELTGAMAKRIGSDGGGALIIDYGLNGV-VTDSLQAIRKHKFVDLFDNPGSADLSAYVDFASISHSAEEASERVSV  401 (483)
Q Consensus       323 ~~~a~~~l~~la~~l~~~~G~~LiIDYG~~~~-~~gTLr~yr~H~~~dpl~~PG~~DITAhVdF~~L~~~a~~~g~g~~~  401 (483)
                      +++...|+..++..+.+  |++|+||||+... .++|+|+|++|+.+|||.+||++||||||||++|++++++.  |+.+
T Consensus       218 ~~~~~~~~~~~~~~~~~--G~~l~iDYG~~~~~~~~~l~~~~~h~~~d~l~~pG~~DIT~~VnFs~L~~~~~~~--g~~~  293 (365)
T d1zkda1         218 RPDTEILKIASRVRDQG--GAALIIDYGHLRSDVGDTFQAIASHSYADPLQHPGRADLTAHVDFDALGRAAESI--GARA  293 (365)
T ss_dssp             CCSHHHHHHHHHHHHHC--EEEEEEEEEESSCCBCCCCEEECSSSEECTTSSTTSSEEECCEEHHHHHHHHHHT--TCEE
T ss_pred             chHHHHHHHhhhhhhcc--cceeeeccccccccccccchhhhhhhccccccCCCCcceeeeeCHHHHHHHHHhc--Ccce
Confidence            99999999988887775  9999999999765 56678889999999999999999999999999999999987  6999


Q ss_pred             eccccHHHHHHhCChHHHHHHHHhcCCHHHHHHHHHHHhHhhcCCCCCCCCCCCCCCCCC--CcccccEEEEecCCCCCC
Q 011546          402 HGPMTQSQFLGSLGINFRVESLLQNCTEEQAESLRTGYWSLVGEGEAPFWEGPDEQAPIG--MGTRYLAMAIVNKNQGVP  479 (483)
Q Consensus       402 ~g~~tQ~~FL~~lGI~~rl~~L~~~~~~~~~~~~~~~~~rLi~~~~~~~~~~~~~~~P~~--MGe~FKVl~i~~k~~~~~  479 (483)
                      .|++||++||++|||.+|++.|.++.++++..++.++++||++              |.+  |||+||||+++++++..+
T Consensus       294 ~~~~tQ~~FL~~~GI~~~~~~l~~~~~~~~~~~~~~~~~~Li~--------------p~~~~MGe~FKVl~~~~~~~~~~  359 (365)
T d1zkda1         294 HGPVTQGAFLKRLGIETRALSLMAKATPQVSEDIAGALQRLTG--------------EGRGAMGSMFKVIGVSDPKIETL  359 (365)
T ss_dssp             EEEEEHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHHHHHHC--------------EETTEETTTEEEEEEECTTCCCC
T ss_pred             eccccHHHHHHHCCHHHHHHHHHccCCHHHHHHHHHHHHHhcC--------------CCchhcchhEEEEEEeCCCCCCC
Confidence            9999999999999999999999888788888899999999999              965  999999999999998888


Q ss_pred             CCCC
Q 011546          480 VPFE  483 (483)
Q Consensus       480 ~gF~  483 (483)
                      .||+
T Consensus       360 ~gf~  363 (365)
T d1zkda1         360 VALS  363 (365)
T ss_dssp             TTTT
T ss_pred             CCCC
Confidence            8995


No 2  
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]}
Probab=96.91  E-value=0.0011  Score=61.79  Aligned_cols=49  Identities=20%  Similarity=0.352  Sum_probs=38.3

Q ss_pred             cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      .+....-+|+|+|||+|.|..-|++..         -+++.||+.+.|.+.-+++...
T Consensus        17 ~~~~~~d~VlEIGpG~G~LT~~Ll~~~---------~~v~avE~D~~l~~~l~~~~~~   65 (235)
T d1qama_          17 IRLNEHDNIFEIGSGKGHFTLELVQRC---------NFVTAIEIDHKLCKTTENKLVD   65 (235)
T ss_dssp             CCCCTTCEEEEECCTTSHHHHHHHHHS---------SEEEEECSCHHHHHHHHHHTTT
T ss_pred             cCCCCCCeEEEECCCchHHHHHHHhCc---------CceEEEeeccchHHHHHHHhhc
Confidence            343334589999999999999998642         1689999999999887777643


No 3  
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.76  E-value=0.0023  Score=58.10  Aligned_cols=56  Identities=9%  Similarity=0.201  Sum_probs=42.2

Q ss_pred             HHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          148 WAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       148 ~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      ++..++.....+..-+|+|+|||+|.++..+.+.         ..+++-||+|+.+.+.-++++.
T Consensus        29 ~~~~~~~~~~~~~~~~iLDiGcGtG~~~~~l~~~---------~~~v~gvD~s~~mi~~a~~~~~   84 (251)
T d1wzna1          29 FVEEIFKEDAKREVRRVLDLACGTGIPTLELAER---------GYEVVGLDLHEEMLRVARRKAK   84 (251)
T ss_dssp             HHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCEEEEeCCCCCccchhhccc---------ceEEEEEeeccccccccccccc
Confidence            4555666667666668999999999998876541         1268999999999887666654


No 4  
>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}
Probab=96.74  E-value=0.0044  Score=55.84  Aligned_cols=60  Identities=17%  Similarity=0.170  Sum_probs=43.9

Q ss_pred             HHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          148 WAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       148 ~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      .+..+.++...|. .+|+|+|||+|.++.-+++.+. .    ...+++-||+|+.+-+.-+++++.
T Consensus        28 ~i~~~~~~~~~~~-~~vLDlGCGtG~~~~~l~~~~~-~----~~~~v~giD~S~~ml~~A~~~~~~   87 (225)
T d1im8a_          28 AIGMLAERFVTAD-SNVYDLGCSRGAATLSARRNIN-Q----PNVKIIGIDNSQPMVERCRQHIAA   87 (225)
T ss_dssp             HHHHHHHHHCCTT-CEEEEESCTTCHHHHHHHHTCC-C----SSCEEEEECSCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhcCCC-CEEEEeccchhhHHHHHHHhhc-C----CCCceEEeCCCHHHHHHHHHHhHh
Confidence            3444444444443 5999999999999988876432 1    234899999999999998888764


No 5  
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.70  E-value=0.0039  Score=58.07  Aligned_cols=52  Identities=13%  Similarity=0.251  Sum_probs=41.4

Q ss_pred             CCcEEEEEcCCcchhHHHHHHHHhc-CcCccccceEEEEecChhhHHHHHHhccc
Q 011546          160 NRVNLVELGPGRGTLMADLLRGASK-FKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       160 ~~~~IvEiGaG~GtLa~DIL~~l~~-~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      ..++|+|+|||+|.++..||..+.. ++..  .+++.-||+|+.+.+.=++++..
T Consensus        40 ~~~~VLDiGcG~G~~~~~ll~~l~~~~~~~--~~~~~~vD~s~~~l~~a~~~~~~   92 (280)
T d1jqea_          40 SEIKILSIGGGAGEIDLQILSKVQAQYPGV--CINNEVVEPSAEQIAKYKELVAK   92 (280)
T ss_dssp             SEEEEEEETCTTSHHHHHHHHHHHHHSTTC--EEEEEEECCCHHHHHHHHHHHTT
T ss_pred             CCCeEEEEcCCCCHHHHHHHHHhhhhccCC--ceEEEEEeCcHHHHHHHHHHHhh
Confidence            4579999999999999999998853 5542  34788999999998777776643


No 6  
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}
Probab=96.67  E-value=0.0025  Score=57.12  Aligned_cols=54  Identities=7%  Similarity=0.125  Sum_probs=39.4

Q ss_pred             HHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          150 MCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       150 ~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      .++.+..+....-+|+|+|||+|.++..+++.   .      -+++-||+|+.+.+.-++++.
T Consensus         5 ~~ll~~~~l~~~~rVLDiGcG~G~~~~~l~~~---~------~~v~gvD~s~~~i~~A~~~~~   58 (231)
T d1vl5a_           5 AKLMQIAALKGNEEVLDVATGGGHVANAFAPF---V------KKVVAFDLTEDILKVARAFIE   58 (231)
T ss_dssp             HHHHHHHTCCSCCEEEEETCTTCHHHHHHGGG---S------SEEEEEESCHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCcCEEEEecccCcHHHHHHHHh---C------CEEEEEECCHHHHhhhhhccc
Confidence            44555566555569999999999998776432   1      168899999999877666664


No 7  
>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.62  E-value=0.0044  Score=55.89  Aligned_cols=70  Identities=19%  Similarity=0.154  Sum_probs=46.1

Q ss_pred             CCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHH
Q 011546          128 EGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ  207 (483)
Q Consensus       128 ~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q  207 (483)
                      -++|.|++++        |..++......|.=..-+|+++|||+|.|+.-.+.   .     ...+++.||+|+...+.=
T Consensus        22 l~qy~Tp~~~--------a~~~~~~~~~~~dl~g~~vLDlg~GtG~l~i~a~~---~-----g~~~v~~vdi~~~~~~~a   85 (201)
T d1wy7a1          22 LEQYRTPGNA--------ASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALL---L-----GAKEVICVEVDKEAVDVL   85 (201)
T ss_dssp             GTCCCCCHHH--------HHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHH---T-----TCSEEEEEESCHHHHHHH
T ss_pred             cccCCCCHHH--------HHHHHHHHHhcCCCCCCEEEECcCcchHHHHHHHH---c-----CCCEEEEEcCcHHHHHHH
Confidence            3589999777        33333333333321234899999999998765432   1     223789999999888877


Q ss_pred             HHhccc
Q 011546          208 HHNLKC  213 (483)
Q Consensus       208 ~~~L~~  213 (483)
                      ++++..
T Consensus        86 ~~N~~~   91 (201)
T d1wy7a1          86 IENLGE   91 (201)
T ss_dssp             HHHTGG
T ss_pred             HHHHHH
Confidence            777653


No 8  
>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.23  E-value=0.0083  Score=52.91  Aligned_cols=64  Identities=16%  Similarity=0.161  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       139 ~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      ..|..-+.. +..+.++. .+..-+|+|+|||+|.++..+.+    .     ..+++-||+|+.+-+.=++++..
T Consensus        18 ~~~~~~~~~-~~~~~~~~-l~~~~~ILDiGcG~G~~~~~la~----~-----~~~v~giD~S~~~i~~ak~~~~~   81 (226)
T d1ve3a1          18 QEYRSRIET-LEPLLMKY-MKKRGKVLDLACGVGGFSFLLED----Y-----GFEVVGVDISEDMIRKAREYAKS   81 (226)
T ss_dssp             HHHHHHHHH-HHHHHHHS-CCSCCEEEEETCTTSHHHHHHHH----T-----TCEEEEEESCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-HHHHHHHh-cCCCCEEEEECCCcchhhhhHhh----h-----hcccccccccccchhhhhhhhcc
Confidence            344444443 34444442 23446999999999998876643    1     12689999999998887777643


No 9  
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus pneumoniae, Ermam [TaxId: 1313]}
Probab=96.01  E-value=0.0012  Score=62.04  Aligned_cols=65  Identities=22%  Similarity=0.358  Sum_probs=43.8

Q ss_pred             CCCCCCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChh
Q 011546          123 DVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT  202 (483)
Q Consensus       123 ~~~G~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~  202 (483)
                      .+||.  .|...+.+-.        .|+   +..+....-.|+|||||+|.|..-++...         -+++.||+++.
T Consensus         5 ~k~GQ--nFL~d~~ii~--------kIv---~~~~~~~~d~VLEIGpG~G~LT~~L~~~~---------~~v~aIE~D~~   62 (245)
T d1yuba_           5 IKYSQ--NFLTSEKVLN--------QII---KQLNLKETDTVYEIGTGKGHLTTKLAKIS---------KQVTSIELDSH   62 (245)
T ss_dssp             CCSCC--CBCCCTTTHH--------HHH---HHCCCCSSEEEEECSCCCSSCSHHHHHHS---------SEEEESSSSCS
T ss_pred             CCCCC--cccCCHHHHH--------HHH---HhcCCCCCCeEEEECCCccHHHHHHHhhc---------CceeEeeeccc
Confidence            45664  6777777632        222   23444344589999999999999887641         16889999998


Q ss_pred             hHHHHHH
Q 011546          203 LQKLQHH  209 (483)
Q Consensus       203 Lr~~Q~~  209 (483)
                      |.+.-++
T Consensus        63 l~~~l~~   69 (245)
T d1yuba_          63 LFNLSSE   69 (245)
T ss_dssp             SSSSSSC
T ss_pred             chhhhhh
Confidence            7544333


No 10 
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]}
Probab=95.98  E-value=0.0028  Score=59.63  Aligned_cols=41  Identities=20%  Similarity=0.275  Sum_probs=33.7

Q ss_pred             cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546          162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL  211 (483)
Q Consensus       162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L  211 (483)
                      -.|+|+|||.|.|-..+++.         .-+++.||+.+.|.+.-+++.
T Consensus        23 d~vlEIGpG~G~LT~~Ll~~---------~~~v~aiEiD~~l~~~L~~~~   63 (252)
T d1qyra_          23 QAMVEIGPGLAALTEPVGER---------LDQLTVIELDRDLAARLQTHP   63 (252)
T ss_dssp             CCEEEECCTTTTTHHHHHTT---------CSCEEEECCCHHHHHHHHTCT
T ss_pred             CEEEEECCCchHHHHHHHcc---------CCceEEEEeccchhHHHHHHh
Confidence            47999999999999998752         126899999999988777654


No 11 
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.98  E-value=0.012  Score=55.84  Aligned_cols=49  Identities=24%  Similarity=0.373  Sum_probs=39.0

Q ss_pred             cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      .+....-.|+|+|||.|.|...+|+.-         -+++.||+.+.|.+.-++++..
T Consensus        17 ~~~~~~d~VlEIGPG~G~LT~~Ll~~~---------~~v~aiE~D~~l~~~L~~~~~~   65 (278)
T d1zq9a1          17 AALRPTDVVLEVGPGTGNMTVKLLEKA---------KKVVACELDPRLVAELHKRVQG   65 (278)
T ss_dssp             TCCCTTCEEEEECCTTSTTHHHHHHHS---------SEEEEEESCHHHHHHHHHHHTT
T ss_pred             hCCCCCCEEEEECCCchHHHHHHHhcC---------CcEEEEEEccchhHHHHHHHhh
Confidence            344334589999999999999998642         1688999999999988887754


No 12 
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=95.97  E-value=0.021  Score=51.53  Aligned_cols=69  Identities=10%  Similarity=0.187  Sum_probs=44.4

Q ss_pred             CCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHH
Q 011546          128 EGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ  207 (483)
Q Consensus       128 ~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q  207 (483)
                      -..|.|+++|.       |.|+....+..+... -+|+++|||+|.|+.-.+.   .     ..-+++.||+++...+.-
T Consensus        24 leQy~T~~~~a-------~~~~~~~~~~~dl~G-k~VLDlGcGtG~l~i~a~~---~-----ga~~V~~vDid~~a~~~a   87 (197)
T d1ne2a_          24 LEQYPTDASTA-------AYFLIEIYNDGNIGG-RSVIDAGTGNGILACGSYL---L-----GAESVTAFDIDPDAIETA   87 (197)
T ss_dssp             ---CCCCHHHH-------HHHHHHHHHHTSSBT-SEEEEETCTTCHHHHHHHH---T-----TBSEEEEEESCHHHHHHH
T ss_pred             cccCCCCHHHH-------HHHHHHHHHcCCCCC-CEEEEeCCCCcHHHHHHHH---c-----CCCcccccccCHHHHHHH
Confidence            35788998883       334434444444433 4999999999998743321   1     122689999999988877


Q ss_pred             HHhcc
Q 011546          208 HHNLK  212 (483)
Q Consensus       208 ~~~L~  212 (483)
                      ++++.
T Consensus        88 r~N~~   92 (197)
T d1ne2a_          88 KRNCG   92 (197)
T ss_dssp             HHHCT
T ss_pred             HHccc
Confidence            77654


No 13 
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}
Probab=95.93  E-value=0.0065  Score=52.17  Aligned_cols=57  Identities=12%  Similarity=-0.013  Sum_probs=45.5

Q ss_pred             HHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          148 WAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       148 ~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      ++.+.|..++.+...+|+++|||+|..+.-+.+.         -.+++-||+|+.+-+.-+++.+.
T Consensus         8 ~~~~~~~~l~~~~~~rvLd~GCG~G~~a~~la~~---------G~~V~gvD~S~~~i~~a~~~~~~   64 (201)
T d1pjza_           8 DLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQ---------GYHVVGAELSEAAVERYFTERGE   64 (201)
T ss_dssp             HHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHH---------CCEEEEEEECHHHHHHHHHHHCS
T ss_pred             HHHHHHHHcCCCCCCEEEEecCcCCHHHHHHHHc---------CCceEeecccHHHHHHHHHHhcc
Confidence            3455678888877789999999999988877542         12689999999999998887754


No 14 
>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=95.85  E-value=0.0095  Score=52.68  Aligned_cols=48  Identities=21%  Similarity=0.315  Sum_probs=35.2

Q ss_pred             cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      +.....-+|+|+|||+|.++.-+.+   ..+      +++.||+|+...+.=++++.
T Consensus        48 l~~~~~~~VLDiGcG~G~~~~~la~---~~~------~v~~iD~s~~~i~~a~~n~~   95 (194)
T d1dusa_          48 VVVDKDDDILDLGCGYGVIGIALAD---EVK------STTMADINRRAIKLAKENIK   95 (194)
T ss_dssp             CCCCTTCEEEEETCTTSHHHHHHGG---GSS------EEEEEESCHHHHHHHHHHHH
T ss_pred             CCcCCCCeEEEEeecCChhHHHHHh---hcc------ccceeeeccccchhHHHHHH
Confidence            4444446999999999998865532   222      68899999998888777664


No 15 
>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}
Probab=95.82  E-value=0.04  Score=51.04  Aligned_cols=51  Identities=18%  Similarity=0.176  Sum_probs=37.2

Q ss_pred             HHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          154 EQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       154 ~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      ...+.+...+|+|+|||+|.++.-+.+..        ..+++-||+||.+.+.=+++..
T Consensus        61 ~~~~l~~~~~vLDiGcG~G~~~~~la~~~--------~~~v~gvD~s~~~i~~a~~~~~  111 (282)
T d2o57a1          61 MTGVLQRQAKGLDLGAGYGGAARFLVRKF--------GVSIDCLNIAPVQNKRNEEYNN  111 (282)
T ss_dssp             HTTCCCTTCEEEEETCTTSHHHHHHHHHH--------CCEEEEEESCHHHHHHHHHHHH
T ss_pred             HhcCCCCCCEEEEeCCCCcHHHhhhhccC--------CcEEEEEeccchhhhhhhcccc
Confidence            33456666799999999999988775431        1368899999998766555543


No 16 
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}
Probab=95.82  E-value=0.021  Score=52.79  Aligned_cols=54  Identities=15%  Similarity=0.206  Sum_probs=40.5

Q ss_pred             HHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          151 CLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       151 ~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      ..++.+.....-+|+|+|||.|+++..+|...      ..  +++.||+|+.+.+.-++++.
T Consensus        84 ~fl~~l~~~~~~~vLD~GcG~G~~t~~ll~~~------~~--~v~~vD~s~~~l~~a~~~~~  137 (254)
T d1xtpa_          84 NFIASLPGHGTSRALDCGAGIGRITKNLLTKL------YA--TTDLLEPVKHMLEEAKRELA  137 (254)
T ss_dssp             HHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH------CS--EEEEEESCHHHHHHHHHHTT
T ss_pred             HHHhhCCCCCCCeEEEecccCChhhHHHHhhc------Cc--eEEEEcCCHHHHHhhhcccc
Confidence            34444554455799999999999999987532      11  68999999999888777764


No 17 
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}
Probab=95.79  E-value=0.012  Score=55.14  Aligned_cols=81  Identities=16%  Similarity=0.181  Sum_probs=51.6

Q ss_pred             CCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcccccccCcCCcccceeeccCCCCceee
Q 011546          159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLAGTPVSW  238 (483)
Q Consensus       159 p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~~~~~~~~~~~~~~~~~~~~~~~v~W  238 (483)
                      ..+.+|+|+|||+|.++..+...   .|   ...+|+-||+|+.+-+.-++++...                  +.++.+
T Consensus        26 ~~~~~ILDiGcG~G~~~~~la~~---~~---~~~~v~giD~s~~~l~~a~~~~~~~------------------~~~~~f   81 (281)
T d2gh1a1          26 TKPVHIVDYGCGYGYLGLVLMPL---LP---EGSKYTGIDSGETLLAEARELFRLL------------------PYDSEF   81 (281)
T ss_dssp             CSCCEEEEETCTTTHHHHHHTTT---SC---TTCEEEEEECCHHHHHHHHHHHHSS------------------SSEEEE
T ss_pred             CCcCEEEEecCcCCHHHHHHHHh---CC---CCCEEEEEecchhHhhhhhcccccc------------------cccccc
Confidence            45679999999999988877432   12   2347899999999877766666431                  113333


Q ss_pred             c-cccccCCC-CCCEEEEEeccccccc
Q 011546          239 H-AALEQVPS-GFPTIIVAHEFYDALP  263 (483)
Q Consensus       239 ~-~sl~~lp~-~~~~iiiANEffDALP  263 (483)
                      . .++++++. +..=+|+++.+|--+|
T Consensus        82 ~~~d~~~~~~~~~fD~v~~~~~l~~~~  108 (281)
T d2gh1a1          82 LEGDATEIELNDKYDIAICHAFLLHMT  108 (281)
T ss_dssp             EESCTTTCCCSSCEEEEEEESCGGGCS
T ss_pred             cccccccccccCCceEEEEehhhhcCC
Confidence            2 22333431 2134788888887765


No 18 
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.65  E-value=0.0098  Score=57.52  Aligned_cols=68  Identities=18%  Similarity=0.282  Sum_probs=47.7

Q ss_pred             CccCCCChhHHHHHHHHHHHHHHHH---HcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHH
Q 011546          130 DFITSPEVSQMFGEMVGVWAMCLWE---QMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL  206 (483)
Q Consensus       130 DFiTSpeIs~~FGe~Ia~~i~~~w~---~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~  206 (483)
                      -|++.+.|-+        .|++...   ..+.+...+|||+|||.|.|...+|+..+       .-+++.||+.+.+.+.
T Consensus        18 nfL~d~~i~~--------~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~-------~~~v~~iE~D~~~~~~   82 (322)
T d1i4wa_          18 KYLWNPTVYN--------KIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYC-------PRQYSLLEKRSSLYKF   82 (322)
T ss_dssp             CCBCCHHHHH--------HHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHC-------CSEEEEECCCHHHHHH
T ss_pred             cccCCHHHHH--------HHHHHhcCCccccccCCCeEEEECCCCCHHHHHHHhcCC-------CCEEEEEECCHHHHHH
Confidence            5777766533        3333331   12334567999999999999999987642       1268999999999888


Q ss_pred             HHHhcc
Q 011546          207 QHHNLK  212 (483)
Q Consensus       207 Q~~~L~  212 (483)
                      -++++.
T Consensus        83 L~~~~~   88 (322)
T d1i4wa_          83 LNAKFE   88 (322)
T ss_dssp             HHHHTT
T ss_pred             HHHhcc
Confidence            777664


No 19 
>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.59  E-value=0.011  Score=53.14  Aligned_cols=46  Identities=15%  Similarity=0.207  Sum_probs=35.5

Q ss_pred             CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      ...+|+|+|||+|.++..++.   ..+     -+++.||+|+.+-+.-++++..
T Consensus        60 ~~~~vLDiGcG~G~~~~~l~~---~~~-----~~v~~vD~s~~~l~~ak~~~~~  105 (222)
T d2ex4a1          60 GTSCALDCGAGIGRITKRLLL---PLF-----REVDMVDITEDFLVQAKTYLGE  105 (222)
T ss_dssp             CCSEEEEETCTTTHHHHHTTT---TTC-----SEEEEEESCHHHHHHHHHHTGG
T ss_pred             CCCEEEEeccCCCHhhHHHHH---hcC-----CEEEEeecCHHHhhcccccccc
Confidence            446899999999998887742   111     1689999999998887777753


No 20 
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}
Probab=95.59  E-value=0.029  Score=49.19  Aligned_cols=42  Identities=14%  Similarity=0.090  Sum_probs=31.8

Q ss_pred             CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546          161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL  211 (483)
Q Consensus       161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L  211 (483)
                      +-+|+|+|||+|.++.-+.+.         ..+++-||+|+.+-+.-+++.
T Consensus        31 ~grvLDiGcG~G~~~~~la~~---------g~~v~gvD~s~~~l~~a~~~~   72 (198)
T d2i6ga1          31 PGRTLDLGCGNGRNSLYLAAN---------GYDVTAWDKNPASMANLERIK   72 (198)
T ss_dssp             SCEEEEETCTTSHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHH
T ss_pred             CCcEEEECCCCCHHHHHHHHH---------hhhhccccCcHHHHHHHHHHh
Confidence            348999999999988766541         126889999999777655544


No 21 
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}
Probab=95.52  E-value=0.027  Score=50.04  Aligned_cols=58  Identities=17%  Similarity=0.198  Sum_probs=39.0

Q ss_pred             HHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546          144 MVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL  211 (483)
Q Consensus       144 ~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L  211 (483)
                      ....++...+.+... .+.+|+|+|||+|.++.-+.+    .     ..+++-||+|+.+.+.-+++.
T Consensus        27 ~~~~~~~~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~----~-----~~~v~giD~s~~~l~~a~~~~   84 (246)
T d2avna1          27 LYHRLIGSFLEEYLK-NPCRVLDLGGGTGKWSLFLQE----R-----GFEVVLVDPSKEMLEVAREKG   84 (246)
T ss_dssp             HHHHHHHHHHHHHCC-SCCEEEEETCTTCHHHHHHHT----T-----TCEEEEEESCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhcC-CCCEEEEECCCCchhcccccc----c-----ceEEEEeeccccccccccccc
Confidence            334444444444443 345899999999999986632    1     127899999999877665543


No 22 
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}
Probab=95.51  E-value=0.015  Score=52.34  Aligned_cols=48  Identities=8%  Similarity=0.115  Sum_probs=34.5

Q ss_pred             cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      .+.-..-+|+|+|||+|.++..+.+.   .    .  +++-||+|+.+-+.-++++.
T Consensus        12 ~~~~~~~rILDiGcGtG~~~~~la~~---~----~--~v~gvD~S~~~l~~A~~~~~   59 (234)
T d1xxla_          12 AECRAEHRVLDIGAGAGHTALAFSPY---V----Q--ECIGVDATKEMVEVASSFAQ   59 (234)
T ss_dssp             HTCCTTCEEEEESCTTSHHHHHHGGG---S----S--EEEEEESCHHHHHHHHHHHH
T ss_pred             hCCCCCCEEEEeCCcCcHHHHHHHHh---C----C--eEEEEeCChhhhhhhhhhhc
Confidence            34323358999999999998877432   1    1  68899999998776655554


No 23 
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}
Probab=95.00  E-value=0.067  Score=49.53  Aligned_cols=45  Identities=11%  Similarity=0.181  Sum_probs=34.0

Q ss_pred             CCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546          160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL  211 (483)
Q Consensus       160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L  211 (483)
                      .+.+|+|+|||+|.++..+.+..   |    ..+++-||+|+.+.+.=++++
T Consensus        84 ~~~~iLDiGcG~G~~~~~l~~~~---~----~~~~~giD~s~~~~~~a~~~~  128 (268)
T d1p91a_          84 KATAVLDIGCGEGYYTHAFADAL---P----EITTFGLDVSKVAIKAAAKRY  128 (268)
T ss_dssp             TCCEEEEETCTTSTTHHHHHHTC---T----TSEEEEEESCHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHC---C----CCEEEEecchHhhhhhhhccc
Confidence            44699999999999988886532   2    247888999999876655544


No 24 
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria monocytogenes [TaxId: 1639]}
Probab=95.00  E-value=0.035  Score=52.78  Aligned_cols=76  Identities=11%  Similarity=0.125  Sum_probs=52.5

Q ss_pred             CCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHH
Q 011546          127 AEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL  206 (483)
Q Consensus       127 ~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~  206 (483)
                      ..|-|+|+..|..+..+++..+    .   ......+|+|.+||+|.++..+++.+.....  ...+++-+|+++.+.+.
T Consensus        91 ~~g~~~TP~~i~~~m~~l~~~~----~---~~~~~~~vlDp~~GsG~~l~~~~~~l~~~~~--~~~~~~g~di~~~~~~~  161 (328)
T d2f8la1          91 QVNHQMTPDSIGFIVAYLLEKV----I---QKKKNVSILDPACGTANLLTTVINQLELKGD--VDVHASGVDVDDLLISL  161 (328)
T ss_dssp             CGGGCCCCHHHHHHHHHHHHHH----H---TTCSEEEEEETTCTTSHHHHHHHHHHHTTSS--CEEEEEEEESCHHHHHH
T ss_pred             cCCeEECcHHHHHHHHHHHHHH----h---CCCCCCEEEeCCCCcchhHHHHHHHHHhccC--ccceEEEecccHHHHHH
Confidence            3567999988866544433322    1   2223479999999999999999998864321  23467889999988776


Q ss_pred             HHHhc
Q 011546          207 QHHNL  211 (483)
Q Consensus       207 Q~~~L  211 (483)
                      -+..+
T Consensus       162 a~~~~  166 (328)
T d2f8la1         162 ALVGA  166 (328)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            55544


No 25 
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=94.95  E-value=0.056  Score=50.35  Aligned_cols=54  Identities=19%  Similarity=0.297  Sum_probs=39.9

Q ss_pred             HHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546          146 GVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL  211 (483)
Q Consensus       146 a~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L  211 (483)
                      ..|+.+.++..+.   -+|+|+|||+|.++..+.+.         ..+++-||+|+.+-+.-+++.
T Consensus        45 ~~~l~~~l~~~~~---~~vLD~GcG~G~~~~~la~~---------g~~v~gvD~S~~ml~~A~~~~   98 (292)
T d1xvaa_          45 KAWLLGLLRQHGC---HRVLDVACGTGVDSIMLVEE---------GFSVTSVDASDKMLKYALKER   98 (292)
T ss_dssp             HHHHHHHHHHTTC---CEEEESSCTTSHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHhhhcCC---CEEEEecCCCcHHHHHHHHc---------CCeeeeccCchHHHHHHHHHH
Confidence            4677777766543   38999999999998887542         126889999999877655544


No 26 
>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}
Probab=94.93  E-value=0.052  Score=48.83  Aligned_cols=54  Identities=24%  Similarity=0.294  Sum_probs=41.6

Q ss_pred             HHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          154 EQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       154 ~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      +.++....-+|+|+|||+|.++.-+.+...      ...+++.||+++.+.+..++++..
T Consensus        69 ~~l~l~~g~~VLdiG~GtG~~s~~la~~~~------~~g~V~~id~~~~~~~~a~~~~~~  122 (213)
T d1dl5a1          69 EWVGLDKGMRVLEIGGGTGYNAAVMSRVVG------EKGLVVSVEYSRKICEIAKRNVER  122 (213)
T ss_dssp             HHTTCCTTCEEEEECCTTSHHHHHHHHHHC------TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             HhhhccccceEEEecCccchhHHHHHHHhC------CCCcEEEeecchhhHHHhhhhHhh
Confidence            345544446999999999999987765442      233789999999999999998864


No 27 
>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=94.90  E-value=0.029  Score=51.32  Aligned_cols=91  Identities=18%  Similarity=0.212  Sum_probs=56.3

Q ss_pred             hcCCCCcccCCCCCCCCCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccc
Q 011546          111 LTNPKAGFYINRDVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTE  190 (483)
Q Consensus       111 LY~P~~GYY~~~~~~G~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~  190 (483)
                      +|-|+.=|.-..-++| .|-++.+|.+       .|+. ++.+. ....+.-+|+|+|+|+|.+++-+.+.+.... ...
T Consensus        41 ~Fvp~~aY~D~~lpi~-~~~~is~P~~-------~a~~-l~~L~-~~l~~g~~VLeIGtGsGY~ta~la~l~g~~g-~~~  109 (223)
T d1r18a_          41 HYSPRNPYMDAPQPIG-GGVTISAPHM-------HAFA-LEYLR-DHLKPGARILDVGSGSGYLTACFYRYIKAKG-VDA  109 (223)
T ss_dssp             GTCSSCTTBSSCEEEE-TTEEECCHHH-------HHHH-HHHTT-TTCCTTCEEEEESCTTSHHHHHHHHHHHHSC-CCT
T ss_pred             HcCCccccCCCCcccc-CCceeehhhh-------HHHH-HHHHh-hccCCCCeEEEecCCCCHHHHHHHHHhhhcc-CCc
Confidence            4556654433334676 4678888765       2222 12221 0221235999999999999887766554321 223


Q ss_pred             cceEEEEecChhhHHHHHHhcc
Q 011546          191 SLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       191 ~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      ..+++-||.++.|.+.-++++.
T Consensus       110 ~~~V~~iE~~~~l~~~a~~~l~  131 (223)
T d1r18a_         110 DTRIVGIEHQAELVRRSKANLN  131 (223)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHH
T ss_pred             ccEEEEEecCHHHHHHHHHhhh
Confidence            3478999999999888777664


No 28 
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}
Probab=94.86  E-value=0.078  Score=47.85  Aligned_cols=50  Identities=12%  Similarity=0.242  Sum_probs=36.3

Q ss_pred             HHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546          154 EQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL  211 (483)
Q Consensus       154 ~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L  211 (483)
                      +.++....-+|+|+|||+|.++..+.+.   .+     .+++-||+||.+.+.=+++.
T Consensus        27 ~~~~l~pg~~VLDiGCG~G~~~~~la~~---~~-----~~v~GvD~s~~~~~~ar~~~   76 (245)
T d1nkva_          27 RVLRMKPGTRILDLGSGSGEMLCTWARD---HG-----ITGTGIDMSSLFTAQAKRRA   76 (245)
T ss_dssp             HHTCCCTTCEEEEETCTTCHHHHHHHHH---TC-----CEEEEEESCHHHHHHHHHHH
T ss_pred             HHcCCCCCCEEEEEcCCCCHHHHHHHHh---cC-----CEEEEEecccchhhHHHHHH
Confidence            3455544469999999999988876542   21     37889999999987655554


No 29 
>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.61  E-value=0.019  Score=52.11  Aligned_cols=44  Identities=11%  Similarity=0.105  Sum_probs=34.4

Q ss_pred             CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      .-+|+|+|||+|.++.-+++.   .+     -+++.||+||.+.+.-+++..
T Consensus        54 g~~VLdIGcG~G~~a~~~a~~---~~-----~~v~~id~s~~~~~~a~~~~~   97 (229)
T d1zx0a1          54 GGRVLEVGFGMAIAASKVQEA---PI-----DEHWIIECNDGVFQRLRDWAP   97 (229)
T ss_dssp             CEEEEEECCTTSHHHHHHHTS---CE-----EEEEEEECCHHHHHHHHHHGG
T ss_pred             CCeEEEeeccchHHHHHHHHc---CC-----CeEEEeCCCHHHHHHHHHHhh
Confidence            359999999999988877531   11     278999999999888777764


No 30 
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}
Probab=94.58  E-value=0.07  Score=47.66  Aligned_cols=54  Identities=28%  Similarity=0.362  Sum_probs=36.7

Q ss_pred             HHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          148 WAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       148 ~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      ++++.+...-.+  -+|+|+|||+|.++.-+.    +.  .   -+++-||+|+.+-+.-++++.
T Consensus        10 ~~~~~~~~~~~~--~~VLDiGcG~G~~~~~l~----~~--g---~~v~giD~s~~~i~~a~~~~~   63 (225)
T d2p7ia1          10 FMVRAFTPFFRP--GNLLELGSFKGDFTSRLQ----EH--F---NDITCVEASEEAISHAQGRLK   63 (225)
T ss_dssp             HHHHHHGGGCCS--SCEEEESCTTSHHHHHHT----TT--C---SCEEEEESCHHHHHHHHHHSC
T ss_pred             HHHHHhhhhCCC--CcEEEEeCCCcHHHHHHH----Hc--C---CeEEEEeCcHHHhhhhhcccc
Confidence            344445444444  379999999999876542    21  1   258999999988877666653


No 31 
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.50  E-value=0.03  Score=51.02  Aligned_cols=74  Identities=18%  Similarity=0.207  Sum_probs=47.9

Q ss_pred             CCCCCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhh
Q 011546          124 VFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL  203 (483)
Q Consensus       124 ~~G~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L  203 (483)
                      ++| .|-++++|.+.       | .+++.+...-.|. -+|+|+|||+|.++.-+.+...      ..-+++-||.++.+
T Consensus        50 ~i~-~~~~is~P~~~-------a-~~le~L~~~l~~g-~~VLdiG~GsGy~ta~la~l~~------~~g~V~~ie~~~~l  113 (224)
T d1i1na_          50 SIG-FQATISAPHMH-------A-YALELLFDQLHEG-AKALDVGSGSGILTACFARMVG------CTGKVIGIDHIKEL  113 (224)
T ss_dssp             EEE-TTEEECCHHHH-------H-HHHHHTTTTSCTT-CEEEEETCTTSHHHHHHHHHHC------TTCEEEEEESCHHH
T ss_pred             ccc-chhhhhhhHHH-------H-HHHHHHhhccCCC-CeEEEecCCCCHHHHHHHHHhC------CCceEEEEcCCHHH
Confidence            565 35688887642       2 1222221111232 5999999999998876655432      22378999999999


Q ss_pred             HHHHHHhccc
Q 011546          204 QKLQHHNLKC  213 (483)
Q Consensus       204 r~~Q~~~L~~  213 (483)
                      .+.-+++++.
T Consensus       114 ~~~a~~~l~~  123 (224)
T d1i1na_         114 VDDSVNNVRK  123 (224)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHhccc
Confidence            9888777753


No 32 
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}
Probab=94.45  E-value=0.061  Score=50.00  Aligned_cols=54  Identities=20%  Similarity=0.258  Sum_probs=41.9

Q ss_pred             HHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          154 EQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       154 ~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      ..++.-..-+|+|+|||+|.|+.-+++++..      .-+++-+|.++.+.+.-++++..
T Consensus        79 ~~l~i~pG~rVLEiG~GsG~lt~~la~~v~~------~g~V~~vD~~e~~~~~A~~n~~~  132 (250)
T d1yb2a1          79 MRCGLRPGMDILEVGVGSGNMSSYILYALNG------KGTLTVVERDEDNLKKAMDNLSE  132 (250)
T ss_dssp             --CCCCTTCEEEEECCTTSHHHHHHHHHHTT------SSEEEEECSCHHHHHHHHHHHHT
T ss_pred             HHcCCCCcCEEEEeeeeCcHHHHHHHHHhCC------CcEEEEEECCHHHHHHHHHHHHH
Confidence            3355433469999999999999999987642      23789999999999888888764


No 33 
>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.21  E-value=0.1  Score=48.93  Aligned_cols=59  Identities=14%  Similarity=0.128  Sum_probs=42.7

Q ss_pred             HHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          147 VWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       147 ~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      +.+-.+.+.++....-+|+|||||.|.++.-+.+..        ..+++-|++|+...+.=+++...
T Consensus        39 ~k~~~~~~~l~l~~g~~VLDiGCG~G~~a~~~a~~~--------g~~v~gi~ls~~q~~~a~~~~~~   97 (280)
T d2fk8a1          39 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--------DVNVIGLTLSKNQHARCEQVLAS   97 (280)
T ss_dssp             HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--------CCEEEEEESCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHhC--------ceeEEEecchHHHHHHHHHHHHh
Confidence            334556667776555699999999999987765431        13789999999988776666643


No 34 
>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}
Probab=93.92  E-value=0.098  Score=48.12  Aligned_cols=49  Identities=16%  Similarity=0.212  Sum_probs=35.3

Q ss_pred             cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      .+.+..-+||++|||+|+++..+++.   +|    .++++.+|. |...+.-++++.
T Consensus        77 ~d~~~~~~vlDvG~G~G~~~~~l~~~---~P----~~~~~~~Dl-p~~~~~a~~~~~  125 (256)
T d1qzza2          77 YDWSAVRHVLDVGGGNGGMLAAIALR---AP----HLRGTLVEL-AGPAERARRRFA  125 (256)
T ss_dssp             SCCTTCCEEEEETCTTSHHHHHHHHH---CT----TCEEEEEEC-HHHHHHHHHHHH
T ss_pred             CCCccCCEEEEECCCCCHHHHHHHHh---hc----CcEEEEecC-hHHHHHHHHHHh
Confidence            34444458999999999999999764   44    358899997 555555555664


No 35 
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}
Probab=93.90  E-value=0.05  Score=49.06  Aligned_cols=57  Identities=12%  Similarity=0.110  Sum_probs=40.1

Q ss_pred             HHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          146 GVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       146 a~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      +.++.+.....+.+ +-+|+|+|||+|.++..+.+.         ..+++-||.|+.+-+.-++++.
T Consensus        24 ~~~~~~~~~~~~~~-~~~vLDiGCG~G~~~~~l~~~---------g~~v~GvD~S~~ml~~A~~~~~   80 (246)
T d1y8ca_          24 SDFIIEKCVENNLV-FDDYLDLACGTGNLTENLCPK---------FKNTWAVDLSQEMLSEAENKFR   80 (246)
T ss_dssp             HHHHHHHHHTTTCC-TTEEEEETCTTSTTHHHHGGG---------SSEEEEECSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCC-CCeEEEEeCcCCHHHHHHHHh---------CCccEeeccchhhhhhcccccc
Confidence            34555666655543 459999999999988776431         1268899999998776555554


No 36 
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.63  E-value=0.025  Score=56.50  Aligned_cols=68  Identities=13%  Similarity=0.173  Sum_probs=52.3

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          138 SQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       138 s~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      ..+|||++-..+.+++++++.-..-+++++|||.|.++..+....   +    .-+++=||+|+.+.+.-+++..
T Consensus       194 ~~vYGEl~~~~i~~Il~~l~Lkpgd~fLDLGCG~G~~vl~aA~~~---g----~~~v~GIDiS~~~i~~Ak~~~~  261 (406)
T d1u2za_         194 NYVYGELLPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC---G----CALSFGCEIMDDASDLTILQYE  261 (406)
T ss_dssp             GGCCCCBCHHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH---C----CSEEEEEECCHHHHHHHHHHHH
T ss_pred             CCccccCCHHHHHHHHHHhCCCCCCEEEeCCCCCcHHHHHHHHHc---C----CCeEEEEeCCHHHHHHHHHHHH
Confidence            356899999999999999886545689999999999988876543   1    1267889999998776555443


No 37 
>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.53  E-value=0.19  Score=44.92  Aligned_cols=47  Identities=11%  Similarity=-0.114  Sum_probs=34.9

Q ss_pred             CCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       157 g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      +.+...+|+++|||+|.++.-+.+.         -.+++=||+||..-+.-+++..
T Consensus        42 ~~~~~~rvLd~GCG~G~~a~~LA~~---------G~~V~gvD~S~~ai~~a~~~~~   88 (229)
T d2bzga1          42 KGKSGLRVFFPLCGKAVEMKWFADR---------GHSVVGVEISELGIQEFFTEQN   88 (229)
T ss_dssp             TTCCSCEEEETTCTTCTHHHHHHHT---------TCEEEEECSCHHHHHHHHHHTT
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHhC---------CCcEEEEeCCHHHHHHHHHHhh
Confidence            4445569999999999988777541         1268999999998776665543


No 38 
>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}
Probab=93.48  E-value=0.19  Score=45.75  Aligned_cols=46  Identities=17%  Similarity=0.316  Sum_probs=32.3

Q ss_pred             HHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHH
Q 011546          154 EQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL  206 (483)
Q Consensus       154 ~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~  206 (483)
                      ........-+|+|+|||+|.++..+++.   +|+    ++++.++.++.+...
T Consensus        74 ~~~d~~~~~~VLDvGcG~G~~~~~la~~---~p~----~~~~~~D~~~~~~~a  119 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVGGGKGGFAAAIARR---APH----VSATVLEMAGTVDTA  119 (253)
T ss_dssp             HHSCCTTCSEEEEETCTTSHHHHHHHHH---CTT----CEEEEEECTTHHHHH
T ss_pred             hhcCCccCCEEEEeCCCCCHHHHHHHHh---cce----eEEEEccCHHHHHHH
Confidence            3444444569999999999999988753   343    478889986554433


No 39 
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=93.32  E-value=0.076  Score=49.80  Aligned_cols=53  Identities=19%  Similarity=0.205  Sum_probs=42.2

Q ss_pred             HcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          155 QMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       155 ~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      .++.....+|+|+|||+|.|+.-+++++.      ..-+++-+|+++.+.+.-+++++.
T Consensus        91 ~l~i~PG~~VLE~G~GsG~lt~~La~~vg------p~G~V~~~d~~~~~~~~Ar~n~~~  143 (264)
T d1i9ga_          91 EGDIFPGARVLEAGAGSGALTLSLLRAVG------PAGQVISYEQRADHAEHARRNVSG  143 (264)
T ss_dssp             HTTCCTTCEEEEECCTTSHHHHHHHHHHC------TTSEEEEECSCHHHHHHHHHHHHH
T ss_pred             HhCCCCCCEEEecCcCCcHHHHHHHHhhC------CCcEEEEecCCHHHHHHHHHhhhh
Confidence            34544446999999999999999998864      223788999999999888887754


No 40 
>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=93.09  E-value=0.076  Score=48.20  Aligned_cols=75  Identities=23%  Similarity=0.348  Sum_probs=51.4

Q ss_pred             cCCCC-CCCCCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEE
Q 011546          119 YINRD-VFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLV  197 (483)
Q Consensus       119 Y~~~~-~~G~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iV  197 (483)
                      |...+ ++| .|-++.+|.+.   +.        +++.++....-+|+|+|+|+|.+++ +|..+-.       -+++.|
T Consensus        48 Y~D~~l~i~-~g~~is~P~~~---a~--------ml~~L~l~~g~~VLeIGsGsGY~ta-ila~l~g-------~~V~~i  107 (215)
T d1jg1a_          48 HIDEPLPIP-AGQTVSAPHMV---AI--------MLEIANLKPGMNILEVGTGSGWNAA-LISEIVK-------TDVYTI  107 (215)
T ss_dssp             TSSSCEECS-TTCEECCHHHH---HH--------HHHHHTCCTTCCEEEECCTTSHHHH-HHHHHHC-------SCEEEE
T ss_pred             cccCCcccc-hhhhhhhhhhH---HH--------HHHhhccCccceEEEecCCCChhHH-HHHHhhC-------ceeEEE
Confidence            55443 566 46688887742   22        2333444344599999999999997 4443321       258899


Q ss_pred             ecChhhHHHHHHhccc
Q 011546          198 ECSPTLQKLQHHNLKC  213 (483)
Q Consensus       198 E~Sp~Lr~~Q~~~L~~  213 (483)
                      |..+.|.+.-+++|..
T Consensus       108 e~~~~l~~~a~~~l~~  123 (215)
T d1jg1a_         108 ERIPELVEFAKRNLER  123 (215)
T ss_dssp             ESCHHHHHHHHHHHHH
T ss_pred             eccHHHHHHHHHHHHH
Confidence            9999999999988864


No 41 
>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}
Probab=93.03  E-value=0.15  Score=47.85  Aligned_cols=59  Identities=20%  Similarity=0.263  Sum_probs=40.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       143 e~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      |.|..+++...    ...+.+|+|+|+|+|.++.-+...   .|    ..+++.||+|+.--+.-+++..
T Consensus        95 E~lv~~~l~~~----~~~~~~vlDlGtGSG~I~i~la~~---~p----~~~v~avDis~~Al~~A~~Na~  153 (274)
T d2b3ta1          95 ECLVEQALARL----PEQPCRILDLGTGTGAIALALASE---RP----DCEIIAVDRMPDAVSLAQRNAQ  153 (274)
T ss_dssp             HHHHHHHHHHS----CSSCCEEEEETCTTSHHHHHHHHH---CT----TSEEEEECSSHHHHHHHHHHHH
T ss_pred             hhhhhhHhhhh----cccccceeeeehhhhHHHHHHHhh---CC----cceeeeccchhHHHhHHHHHHH
Confidence            45555554432    224578999999999998887543   33    3489999999987666555554


No 42 
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}
Probab=92.98  E-value=0.096  Score=48.92  Aligned_cols=53  Identities=23%  Similarity=0.291  Sum_probs=42.1

Q ss_pred             HcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          155 QMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       155 ~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      .++....-+|+|+|||+|.|+..+++.+.      ...+++-+|+||.+.+.-++++..
T Consensus        98 ~l~i~pG~~VLDiG~GsG~lt~~lA~~~~------~~G~V~~vD~~~~~~~~A~~~~~~  150 (266)
T d1o54a_          98 MLDVKEGDRIIDTGVGSGAMCAVLARAVG------SSGKVFAYEKREEFAKLAESNLTK  150 (266)
T ss_dssp             HTTCCTTCEEEEECCTTSHHHHHHHHHTT------TTCEEEEECCCHHHHHHHHHHHHH
T ss_pred             hhCCCCCCEEEECCCCCCHHHHHHHHHhC------CCcEEEEEeCCHHHHHHHHHHHHH
Confidence            35554456999999999999999988653      234789999999998888887754


No 43 
>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}
Probab=92.95  E-value=0.1  Score=48.44  Aligned_cols=51  Identities=22%  Similarity=0.255  Sum_probs=35.5

Q ss_pred             HHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          152 LWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       152 ~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      .+.+...|. -+|+++|||+|.++.-..    +.    . .+++-||+||.+-+.-+++.+
T Consensus       113 ~l~~~~~~g-~~VLDiGcGsG~l~i~aa----~~----g-~~V~gvDis~~av~~A~~na~  163 (254)
T d2nxca1         113 ALARHLRPG-DKVLDLGTGSGVLAIAAE----KL----G-GKALGVDIDPMVLPQAEANAK  163 (254)
T ss_dssp             HHHHHCCTT-CEEEEETCTTSHHHHHHH----HT----T-CEEEEEESCGGGHHHHHHHHH
T ss_pred             HHHhhcCcc-CEEEEcccchhHHHHHHH----hc----C-CEEEEEECChHHHHHHHHHHH
Confidence            334444554 499999999999885432    21    1 267899999998877766654


No 44 
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=92.61  E-value=0.059  Score=49.30  Aligned_cols=51  Identities=16%  Similarity=0.155  Sum_probs=36.7

Q ss_pred             HHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHh
Q 011546          153 WEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN  210 (483)
Q Consensus       153 w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~  210 (483)
                      ++.+.....-+|+++|||+|+.+..+.+..   |    .-+++-||+||.+-+.-+++
T Consensus        67 l~~l~ikpG~~VLDlGcGsG~~~~~la~~~---~----~g~V~aVDiS~~~i~~a~~~  117 (230)
T d1g8sa_          67 LKVMPIKRDSKILYLGASAGTTPSHVADIA---D----KGIVYAIEYAPRIMRELLDA  117 (230)
T ss_dssp             CCCCCCCTTCEEEEESCCSSHHHHHHHHHT---T----TSEEEEEESCHHHHHHHHHH
T ss_pred             HHhCCCCCCCEEEEeCEEcCHHHHHHHHhC---C----CCEEEEEeCcHHHHHHHHHH
Confidence            344444344699999999999999987742   2    23789999999886654443


No 45 
>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=92.04  E-value=0.079  Score=48.42  Aligned_cols=58  Identities=16%  Similarity=0.060  Sum_probs=41.4

Q ss_pred             HHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          149 AMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       149 i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      |+.-.+.++....-+|+++|||+|+++..+.+.+-.      .-+++-||+||.+-+.-+++..
T Consensus        62 i~~~l~~l~i~pG~~VLDlGaGsG~~t~~la~~VG~------~G~V~aVD~s~~~l~~a~~~a~  119 (227)
T d1g8aa_          62 IMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGW------EGKIFGIEFSPRVLRELVPIVE  119 (227)
T ss_dssp             HHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCT------TSEEEEEESCHHHHHHHHHHHS
T ss_pred             HHccccccccCCCCEEEEeccCCCHHHHHHHHHhCC------CCEEEEEeCcHHHHHHHHHHHH
Confidence            333344455434469999999999999999886532      2378889999998776666553


No 46 
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=91.80  E-value=0.097  Score=45.53  Aligned_cols=48  Identities=17%  Similarity=0.243  Sum_probs=36.0

Q ss_pred             CCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       157 g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      +....-+|+|+|||+|.++..+++   ..      -+++-||+||.+.+.=+++++.
T Consensus        30 ~~~~g~~VLDiGcGsG~~s~~lA~---~~------~~V~avD~~~~~l~~a~~n~~~   77 (186)
T d1l3ia_          30 EPGKNDVAVDVGCGTGGVTLELAG---RV------RRVYAIDRNPEAISTTEMNLQR   77 (186)
T ss_dssp             CCCTTCEEEEESCTTSHHHHHHHT---TS------SEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEEECCeEcccccccc---cc------eEEEEecCCHHHHHHHHHHHHH
Confidence            433345999999999999876543   11      1688899999998888887754


No 47 
>d2okca1 c.66.1.45 (A:9-433) Type I restriction enzyme StySJI M protein {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=91.80  E-value=0.21  Score=49.18  Aligned_cols=107  Identities=17%  Similarity=0.226  Sum_probs=67.4

Q ss_pred             CCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhc-CcCc-----cccceEEEEecC
Q 011546          127 AEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASK-FKNF-----TESLHIHLVECS  200 (483)
Q Consensus       127 ~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~-~p~~-----~~~l~y~iVE~S  200 (483)
                      ..|-|||+.+|..+.-+++           +.....+|++-.||+|.|...+++.++. ....     .....++-+|++
T Consensus       140 ~~G~f~TP~~Iv~~mv~ll-----------~~~~~~~IlDPacGsG~fL~~a~~~~~~~~~~~~~~~~~~~~~l~g~E~~  208 (425)
T d2okca1         140 GAGQYFTPRPLIQAMVDCI-----------NPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNT  208 (425)
T ss_dssp             CCGGGCCCHHHHHHHHHHH-----------CCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESC
T ss_pred             cchhhccchhhhHhhheec-----------cCcccceeeccccccCccHHHHHHHHHhhccchhhhhhhhhhhhhhhhcc
Confidence            3689999999876543332           2212358999999999999999999874 2221     112368899999


Q ss_pred             hhhHHHHHHhcccccccCcCCcccceeeccCCCCceeeccccccCCCCCCEEEEEec
Q 011546          201 PTLQKLQHHNLKCMDENNANDNVEERTISSLAGTPVSWHAALEQVPSGFPTIIVAHE  257 (483)
Q Consensus       201 p~Lr~~Q~~~L~~~~~~~~~~~~~~~~~~~~~~~~v~W~~sl~~lp~~~~~iiiANE  257 (483)
                      +.....-+-.+.-+..             .....++.+.++++.-+....-+||+|=
T Consensus       209 ~~~~~la~~n~~l~g~-------------~~~~~~i~~~d~l~~~~~~~fD~Ii~NP  252 (425)
T d2okca1         209 PLVVTLASMNLYLHGI-------------GTDRSPIVCEDSLEKEPSTLVDVILANP  252 (425)
T ss_dssp             HHHHHHHHHHHHHTTC-------------CSSCCSEEECCTTTSCCSSCEEEEEECC
T ss_pred             HHHHHHHHhhhhhcCC-------------ccccceeecCchhhhhcccccceEEecC
Confidence            9998876655532110             0011245565555544433345777764


No 48 
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.67  E-value=0.07  Score=51.15  Aligned_cols=60  Identities=15%  Similarity=0.119  Sum_probs=43.7

Q ss_pred             HHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          147 VWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       147 ~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      ..+.++.+.++....-.|+++|||.|.++..+...   .+    ..+++=||+|+.+.+..++.++.
T Consensus       138 ~~~~~~~~~~~l~~~~~vlD~GcG~G~~~~~~a~~---~~----~~~~~Gid~s~~~~~~a~~~~~~  197 (328)
T d1nw3a_         138 DLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAA---TN----CKHHYGVEKADIPAKYAETMDRE  197 (328)
T ss_dssp             HHHHHHHHHSCCCTTCEEEEETCTTSHHHHHHHHH---CC----CSEEEEEECSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCEEEEcCCCCCHHHHHHHHH---hC----CCeEEEEeCCHHHHHHHHHHHHH
Confidence            34555667777665669999999999988777542   22    22688899999998877766643


No 49 
>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}
Probab=91.58  E-value=0.17  Score=45.99  Aligned_cols=66  Identities=15%  Similarity=0.157  Sum_probs=44.7

Q ss_pred             CCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHH
Q 011546          128 EGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ  207 (483)
Q Consensus       128 ~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q  207 (483)
                      .|-++++|++.-   .        +++.+.....-+|+|+|||+|.+++- |..+.        -+++-||.++.+.+.-
T Consensus        49 ~g~~~~~p~~~a---~--------ml~~L~l~~g~~VLdIG~GsGy~ta~-La~l~--------~~V~aiE~~~~~~~~A  108 (224)
T d1vbfa_          49 PGINTTALNLGI---F--------MLDELDLHKGQKVLEIGTGIGYYTAL-IAEIV--------DKVVSVEINEKMYNYA  108 (224)
T ss_dssp             TTEEECCHHHHH---H--------HHHHTTCCTTCEEEEECCTTSHHHHH-HHHHS--------SEEEEEESCHHHHHHH
T ss_pred             CCCceehhhhHH---H--------HHHHhhhcccceEEEecCCCCHHHHH-HHHHh--------cccccccccHHHHHHH
Confidence            355777777532   1        22333443345999999999999874 43331        1688899999999988


Q ss_pred             HHhccc
Q 011546          208 HHNLKC  213 (483)
Q Consensus       208 ~~~L~~  213 (483)
                      ++++..
T Consensus       109 ~~~~~~  114 (224)
T d1vbfa_         109 SKLLSY  114 (224)
T ss_dssp             HHHHTT
T ss_pred             HHHHhc
Confidence            777653


No 50 
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein  FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.52  E-value=0.16  Score=48.72  Aligned_cols=52  Identities=19%  Similarity=0.208  Sum_probs=41.3

Q ss_pred             cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      ++....-+|+|+|+|+|.|+.-+.+++..      .-+++-+|+++.+.+.-+++++.
T Consensus        94 l~i~pG~rVLE~GtGsG~lt~~LAr~vg~------~G~V~t~E~~~~~~~~A~~n~~~  145 (324)
T d2b25a1          94 MDINPGDTVLEAGSGSGGMSLFLSKAVGS------QGRVISFEVRKDHHDLAKKNYKH  145 (324)
T ss_dssp             HTCCTTCEEEEECCTTSHHHHHHHHHHCT------TCEEEEEESSHHHHHHHHHHHHH
T ss_pred             hCCCCCCEEEEecccccHHHHHHHHHhCC------CcEEEEecCCHHHHHHHHHHHHH
Confidence            45444469999999999999999988642      23788899999998887777754


No 51 
>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=91.35  E-value=0.19  Score=45.14  Aligned_cols=66  Identities=17%  Similarity=0.203  Sum_probs=48.1

Q ss_pred             CChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          135 PEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       135 peIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      ..|++--|++|...+..    . .|  -+|+|+|+|.|.-+.-+++++.      +.-+++.||++|...+..++.+..
T Consensus        38 m~i~~~~G~lL~~lv~~----~-kp--k~ILEiGt~~G~Sti~la~al~------~~g~v~sid~~~~~~~~a~~~~~~  103 (214)
T d2cl5a1          38 MNVGDAKGQIMDAVIRE----Y-SP--SLVLELGAYCGYSAVRMARLLQ------PGARLLTMEMNPDYAAITQQMLNF  103 (214)
T ss_dssp             CSCHHHHHHHHHHHHHH----H-CC--SEEEEECCTTSHHHHHHHTTCC------TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             cccCHHHHHHHHHHHHh----h-CC--CEEEEEccCchhHHHHHHHhCC------CccEEEEEeccHHHHHHHHHHHHH
Confidence            35778888877554432    2 33  4999999999998877765442      234799999999999988887753


No 52 
>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=90.99  E-value=0.71  Score=43.25  Aligned_cols=62  Identities=11%  Similarity=0.108  Sum_probs=43.5

Q ss_pred             HHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       143 e~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      ++--+-+-.+.++++....-+|+|+|||-|.++.-+....   +     .+++-|.+|+...+.-+++..
T Consensus        44 ~Aq~~k~~~~~~~l~l~~G~~VLDiGCG~G~~~~~~a~~~---g-----~~v~git~s~~q~~~a~~~~~  105 (291)
T d1kpia_          44 EAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEY---D-----VNVIGLTLSENQYAHDKAMFD  105 (291)
T ss_dssp             HHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH---C-----CEEEEEESCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCCEEEEecCcchHHHHHHHHhc---C-----cceeeccchHHHHHHHHHHHH
Confidence            3333444556677787666799999999999988775432   2     378889999987666555443


No 53 
>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.93  E-value=0.062  Score=49.55  Aligned_cols=49  Identities=16%  Similarity=0.239  Sum_probs=34.5

Q ss_pred             CCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       157 g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      |.....+|+|+|||+|.+..  +.   ..+.+   -+++.+|.|+.+.+.-++.+..
T Consensus        51 g~~~g~~vLDiGcG~g~~~~--~~---~~~~~---~~v~~~D~S~~~i~~~~~~~~~   99 (263)
T d2g72a1          51 GEVSGRTLIDIGSGPTVYQL--LS---ACSHF---EDITMTDFLEVNRQELGRWLQE   99 (263)
T ss_dssp             SCSCCSEEEEETCTTCCGGG--TT---GGGGC---SEEEEECSCHHHHHHHHHHHTT
T ss_pred             CCCCCcEEEEeccCCCHHHH--HH---hcccC---CeEEEEeCCHHHHHHHHHHHhc
Confidence            44456799999999996532  11   11111   1799999999999988887764


No 54 
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=90.65  E-value=0.14  Score=45.98  Aligned_cols=49  Identities=18%  Similarity=0.087  Sum_probs=35.6

Q ss_pred             cCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546          156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL  211 (483)
Q Consensus       156 ~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L  211 (483)
                      ++....-+|+|+|||+|++...+.+..   |    ..+++-||+||.+-+.-+++.
T Consensus        52 l~lkpg~~VLDlGcG~G~~~~~la~~v---~----~g~V~gvDis~~~i~~a~~~a  100 (209)
T d1nt2a_          52 LKLRGDERVLYLGAASGTTVSHLADIV---D----EGIIYAVEYSAKPFEKLLELV  100 (209)
T ss_dssp             CCCCSSCEEEEETCTTSHHHHHHHHHT---T----TSEEEEECCCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCcCCHHHHHHHHhc---c----CCeEEEEeCCHHHHHHHHHHh
Confidence            444344699999999999998886542   2    237899999998876544443


No 55 
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}
Probab=90.42  E-value=0.18  Score=43.72  Aligned_cols=35  Identities=26%  Similarity=0.258  Sum_probs=25.8

Q ss_pred             cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHH
Q 011546          162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHH  209 (483)
Q Consensus       162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~  209 (483)
                      -+|+|+|||+|.++.-+    +         +++-||+||.+.+.=++
T Consensus        38 ~~vLDiGcG~G~~~~~~----~---------~~~giD~s~~~~~~a~~   72 (208)
T d1vlma_          38 GRGVEIGVGTGRFAVPL----K---------IKIGVEPSERMAEIARK   72 (208)
T ss_dssp             SCEEEETCTTSTTHHHH----T---------CCEEEESCHHHHHHHHH
T ss_pred             CeEEEECCCCccccccc----c---------eEEEEeCChhhcccccc
Confidence            37999999999876543    1         23568999998776443


No 56 
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Probab=90.20  E-value=0.27  Score=44.44  Aligned_cols=44  Identities=14%  Similarity=0.044  Sum_probs=31.4

Q ss_pred             CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      .-+|+|+|||+|..+..+.+   .-     ..+|+-||+|+.+-+.-+++..
T Consensus        25 ~~~VLDlGCG~G~~~~~~~~---~~-----~~~v~GiD~S~~~l~~A~~r~~   68 (252)
T d1ri5a_          25 GDSVLDLGCGKGGDLLKYER---AG-----IGEYYGVDIAEVSINDARVRAR   68 (252)
T ss_dssp             TCEEEEETCTTTTTHHHHHH---HT-----CSEEEEEESCHHHHHHHHHHHH
T ss_pred             cCEEEEecccCcHHHHHHHH---cC-----CCeEEEecCCHHHHHHHHHHHH
Confidence            35999999999986554433   11     1268899999999777666654


No 57 
>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}
Probab=89.01  E-value=0.29  Score=42.15  Aligned_cols=66  Identities=20%  Similarity=0.251  Sum_probs=43.3

Q ss_pred             CCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          133 TSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       133 TSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      |=|..+- -=|.|..|+...   .  +..-+|+++|||+|.++.-.   +..      ..+++.||.||...+.-++.++
T Consensus        20 ~Rpt~~~-v~e~lf~~l~~~---~--~~g~~vLDl~~G~G~~~i~a---~~~------ga~vv~vD~~~~a~~~~~~N~~   84 (171)
T d1ws6a1          20 ARPSPVR-LRKALFDYLRLR---Y--PRRGRFLDPFAGSGAVGLEA---ASE------GWEAVLVEKDPEAVRLLKENVR   84 (171)
T ss_dssp             CCCCCHH-HHHHHHHHHHHH---C--TTCCEEEEETCSSCHHHHHH---HHT------TCEEEEECCCHHHHHHHHHHHH
T ss_pred             CCCCcHH-HHHHHHHHhhcc---c--cCCCeEEEeccccchhhhhh---hhc------cchhhhcccCHHHHhhhhHHHH
Confidence            4454433 356666665432   2  23348999999999987533   222      1256789999999998888775


Q ss_pred             c
Q 011546          213 C  213 (483)
Q Consensus       213 ~  213 (483)
                      .
T Consensus        85 ~   85 (171)
T d1ws6a1          85 R   85 (171)
T ss_dssp             H
T ss_pred             h
Confidence            3


No 58 
>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}
Probab=87.34  E-value=0.36  Score=43.03  Aligned_cols=42  Identities=12%  Similarity=0.279  Sum_probs=31.7

Q ss_pred             EEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546          163 NLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL  211 (483)
Q Consensus       163 ~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L  211 (483)
                      .|+|+|||+|..+..+..   .+|+    ..|+-||+|+.....=.++.
T Consensus        32 lvLeIGcG~G~~~~~lA~---~~p~----~~~iGiD~~~~~i~~a~~~~   73 (204)
T d2fcaa1          32 IHIEVGTGKGQFISGMAK---QNPD----INYIGIELFKSVIVTAVQKV   73 (204)
T ss_dssp             EEEEECCTTSHHHHHHHH---HCTT----SEEEEECSCHHHHHHHHHHH
T ss_pred             eEEEEEecCcHHHHHHHH---hCCC----CcEEEeecchHHHHHHHHHH
Confidence            699999999998887743   3554    37899999998766544444


No 59 
>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.91  E-value=0.5  Score=42.53  Aligned_cols=64  Identities=11%  Similarity=0.070  Sum_probs=45.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          137 VSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       137 Is~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      |++.-|.+|+.     +-++-.|+  +|+|+|.|.|.=+.-+++++.      +.-+++.||.+|...+..++.+..
T Consensus        43 i~~~~g~lL~~-----L~~~~~~k--~vLEiGt~~GyStl~~a~al~------~~g~i~tie~~~~~~~~A~~~~~~  106 (219)
T d2avda1          43 MTCEQAQLLAN-----LARLIQAK--KALDLGTFTGYSALALALALP------ADGRVVTCEVDAQPPELGRPLWRQ  106 (219)
T ss_dssp             CCHHHHHHHHH-----HHHHTTCC--EEEEECCTTSHHHHHHHTTSC------TTCEEEEEESCSHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHH-----HHHccCCC--eEEEEechhhHHHHHHHHhCC------CCceEEEEeechhHHHHHHHHHHh
Confidence            44555555543     22233343  999999999998888876642      234899999999999999888854


No 60 
>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=86.80  E-value=1.7  Score=40.40  Aligned_cols=62  Identities=13%  Similarity=0.107  Sum_probs=43.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       143 e~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      ++--+-+-.+.++++...--+|+|||||-|.+|.-+.+..        .++++-|-+|+.-.+.=+++..
T Consensus        45 eAQ~~k~~~~~~~l~l~~G~~VLDiGCG~G~~a~~~a~~~--------g~~v~git~s~~Q~~~a~~~~~  106 (285)
T d1kpga_          45 EAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKY--------DVNVVGLTLSKNQANHVQQLVA  106 (285)
T ss_dssp             HHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH--------CCEEEEEESCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCCCEEEEecCcchHHHHHHHhcC--------CcceEEEeccHHHHHHHHHHHH
Confidence            4444444445566676545699999999999998876531        2488999999987766555543


No 61 
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=86.55  E-value=0.45  Score=41.34  Aligned_cols=40  Identities=15%  Similarity=0.216  Sum_probs=29.5

Q ss_pred             CCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhH
Q 011546          159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQ  204 (483)
Q Consensus       159 p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr  204 (483)
                      +..-+|+|.|||+|.++..+.+...      ....++-+|+++...
T Consensus        18 ~~~~~IlDp~~G~G~fl~~~~~~~~------~~~~i~g~ei~~~~~   57 (223)
T d2ih2a1          18 PRGGRVLEPACAHGPFLRAFREAHG------TAYRFVGVEIDPKAL   57 (223)
T ss_dssp             CTTCEEEEETCTTCHHHHHHHHHHC------SCSEEEEEESCTTTC
T ss_pred             CCcCEEEECCCchHHHHHHHHHhcc------ccceEEeeecCHHHH
Confidence            3446999999999999877665432      234689999998753


No 62 
>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}
Probab=86.12  E-value=0.51  Score=41.92  Aligned_cols=37  Identities=14%  Similarity=0.334  Sum_probs=27.9

Q ss_pred             EEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHH
Q 011546          163 NLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL  206 (483)
Q Consensus       163 ~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~  206 (483)
                      .|+|||||+|.++..+.   +.+|+    ..++-||+|+..-..
T Consensus        34 lvLdIGcG~G~~~~~lA---~~~p~----~~~iGid~~~~~v~~   70 (204)
T d1yzha1          34 IHVEVGSGKGAFVSGMA---KQNPD----INYIGIDIQKSVLSY   70 (204)
T ss_dssp             EEEEESCTTSHHHHHHH---HHCTT----SEEEEEESCHHHHHH
T ss_pred             eEEEEeccCCHHHHHHH---HHCCC----CceEEEeccHHHHHH
Confidence            69999999999777663   34554    378899999975444


No 63 
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.27  E-value=0.31  Score=43.42  Aligned_cols=59  Identities=14%  Similarity=0.122  Sum_probs=38.1

Q ss_pred             HHHHHHHHHc---CCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          147 VWAMCLWEQM---GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       147 ~~i~~~w~~~---g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      .|+...+.+.   +.++..+|+|+|||+|.+..-+.   +  +.   .-+++-||+|+.+.+.-++++..
T Consensus        35 ~~~~~~~~~~~~~~~~~g~~vLDlGcG~G~~~~~~~---~--~~---~~~v~giD~S~~~i~~a~~~~~~   96 (257)
T d2a14a1          35 KFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAA---C--DS---FQDITLSDFTDRNREELEKWLKK   96 (257)
T ss_dssp             HHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTG---G--GT---EEEEEEEESCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcccCCCCCEEEEECCCCCHhHHHHh---c--cc---cCcEEEecCCHHHHHHHHHHHhh
Confidence            3444444432   23345689999999998643111   1  11   12689999999999888877754


No 64 
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}
Probab=84.69  E-value=0.5  Score=39.65  Aligned_cols=45  Identities=20%  Similarity=0.197  Sum_probs=34.2

Q ss_pred             CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      ..+|+++|||+|.++...+.  +      .+-+++.||.++...+.-++.+..
T Consensus        15 g~~vlDl~~GtG~~~iea~~--r------ga~~v~~ve~~~~a~~~~~~n~~~   59 (152)
T d2esra1          15 GGRVLDLFAGSGGLAIEAVS--R------GMSAAVLVEKNRKAQAIIQDNIIM   59 (152)
T ss_dssp             SCEEEEETCTTCHHHHHHHH--T------TCCEEEEECCCHHHHHHHHHHHHT
T ss_pred             CCeEEEcCCccCHHHHHHHH--h------Ccceeeeehhchhhhhhhhhhhhh
Confidence            35999999999998875432  1      122899999999998877776653


No 65 
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.13  E-value=0.53  Score=43.91  Aligned_cols=40  Identities=18%  Similarity=0.156  Sum_probs=29.3

Q ss_pred             cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHH
Q 011546          162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHH  209 (483)
Q Consensus       162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~  209 (483)
                      -+|+++|||+|.|+.-..+.        .+-+++.||.|+.+...++.
T Consensus        37 ~~VLDiGcG~G~lsl~aa~~--------Ga~~V~aid~s~~~~~a~~~   76 (311)
T d2fyta1          37 KVVLDVGCGTGILSMFAAKA--------GAKKVLGVDQSEILYQAMDI   76 (311)
T ss_dssp             CEEEEETCTTSHHHHHHHHT--------TCSEEEEEESSTHHHHHHHH
T ss_pred             CEEEEECCCCCHHHHHHHHc--------CCCEEEEEeCHHHHHHHHHH
Confidence            48999999999987655442        11278999999988655443


No 66 
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=83.91  E-value=1.5  Score=40.84  Aligned_cols=39  Identities=18%  Similarity=0.275  Sum_probs=27.4

Q ss_pred             cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHH
Q 011546          162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQH  208 (483)
Q Consensus       162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~  208 (483)
                      -+|+|+|||+|.|+.-..+.    .    +-+++-||.|+.+...++
T Consensus        35 ~~VLDiGcG~G~ls~~aa~~----G----a~~V~avd~s~~~~~a~~   73 (316)
T d1oria_          35 KVVLDVGSGTGILCMFAAKA----G----ARKVIGIECSSISDYAVK   73 (316)
T ss_dssp             CEEEEETCTTSHHHHHHHHT----T----CSEEEEEECSTTHHHHHH
T ss_pred             CEEEEEecCCcHHHHHHHHh----C----CCEEEEEcCcHHHhhhhh
Confidence            37999999999987554331    1    126888999997654443


No 67 
>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.29  E-value=1.5  Score=39.80  Aligned_cols=59  Identities=12%  Similarity=0.124  Sum_probs=41.7

Q ss_pred             HHHHHHHHcCC--CCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          148 WAMCLWEQMGQ--PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       148 ~i~~~w~~~g~--p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      |+.+++.....  ....+++|+|+|+|..+.-+....   |    ..+++-+|+|+..-+.-++.+..
T Consensus        47 ~i~~l~~~~~~~~~~~~~~LDiGtGsg~I~~~l~~~~---~----~~~~~~~Di~~~al~~A~~N~~~  107 (250)
T d2h00a1          47 WVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATL---N----GWYFLATEVDDMCFNYAKKNVEQ  107 (250)
T ss_dssp             HHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHH---H----CCEEEEEESCHHHHHHHHHHHHH
T ss_pred             HHHHHhhhhccCccccceEEEeCCCchHHHHHHHHhC---C----CccccceecCHHHHHHHHHHHHH
Confidence            55555433322  345799999999999888776543   2    24799999999988877776643


No 68 
>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}
Probab=83.19  E-value=1.3  Score=40.98  Aligned_cols=59  Identities=17%  Similarity=0.315  Sum_probs=44.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       143 e~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      |+|..++...+...+.   ..++++|+|+|..+.-+..    +|    ..+++.+|+||.--+.-+++.+
T Consensus        96 E~lv~~~~~~~~~~~~---~~vld~g~GsG~i~~~la~----~~----~~~v~a~Dis~~Al~~A~~Na~  154 (271)
T d1nv8a_          96 EELVELALELIRKYGI---KTVADIGTGSGAIGVSVAK----FS----DAIVFATDVSSKAVEIARKNAE  154 (271)
T ss_dssp             HHHHHHHHHHHHHHTC---CEEEEESCTTSHHHHHHHH----HS----SCEEEEEESCHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhccccc---cEEEEeeeeeehhhhhhhh----cc----cceeeechhhhhHHHHHHHHHH
Confidence            7777888887776653   4899999999998766542    23    2379999999988777666554


No 69 
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=83.17  E-value=1.7  Score=40.72  Aligned_cols=35  Identities=20%  Similarity=0.267  Sum_probs=25.4

Q ss_pred             cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhH
Q 011546          162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQ  204 (483)
Q Consensus       162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr  204 (483)
                      -+|+++|||+|.|+.-..+.    .    +-+++.||.|+.+.
T Consensus        40 ~~VLDlGcGtG~ls~~aa~~----G----a~~V~avd~s~~~~   74 (328)
T d1g6q1_          40 KIVLDVGCGTGILSMFAAKH----G----AKHVIGVDMSSIIE   74 (328)
T ss_dssp             CEEEEETCTTSHHHHHHHHT----C----CSEEEEEESSTHHH
T ss_pred             CEEEEeCCCCCHHHHHHHHh----C----CCEEEEEeCCHHHH
Confidence            48999999999987544331    1    12788999998653


No 70 
>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=80.67  E-value=1.2  Score=40.13  Aligned_cols=46  Identities=17%  Similarity=0.081  Sum_probs=38.4

Q ss_pred             cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      -+|+|+|.+.|.=+.-+.+++.      +.-+++.+|.+|...+..++.+..
T Consensus        61 k~iLEiGT~~GyStl~la~al~------~~g~v~tie~~~~~~~~A~~~~~~  106 (227)
T d1susa1          61 KNTMEIGVYTGYSLLATALAIP------EDGKILAMDINKENYELGLPVIKK  106 (227)
T ss_dssp             CEEEEECCGGGHHHHHHHHHSC------TTCEEEEEESCCHHHHHHHHHHHH
T ss_pred             CcEEEecchhhhhHHHHHhhCC------CCcEEEEEeccchhHHHHHHHHHH
Confidence            4999999999998888887753      224789999999999999988854


No 71 
>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}
Probab=78.73  E-value=1  Score=42.59  Aligned_cols=73  Identities=15%  Similarity=0.272  Sum_probs=48.5

Q ss_pred             CCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHH
Q 011546          128 EGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ  207 (483)
Q Consensus       128 ~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q  207 (483)
                      .|+.-++..---.|=|+++.-.+  .   -.|.+-+|+.+|.|.|.++..+|+.       ....++.+||++|.+-+.-
T Consensus        50 dg~~q~~~~de~~Yhe~l~h~~l--~---~~~~pk~VLiiG~G~G~~~~~ll~~-------~~~~~v~~VEiD~~Vi~~a  117 (312)
T d1uira_          50 DKDVQSTERDEYIYHETLVHPAM--L---THPEPKRVLIVGGGEGATLREVLKH-------PTVEKAVMVDIDGELVEVA  117 (312)
T ss_dssp             TTEEEEETTTHHHHHHHHHHHHH--H---HSSCCCEEEEEECTTSHHHHHHTTS-------TTCCEEEEEESCHHHHHHH
T ss_pred             CCeeeeccccHHHHHHHHhhhhh--h---hCCCcceEEEeCCCchHHHHHHHhc-------CCcceEEEecCCHHHHHHH
Confidence            44443332223456777765221  1   2344569999999999999888652       1223799999999998888


Q ss_pred             HHhcc
Q 011546          208 HHNLK  212 (483)
Q Consensus       208 ~~~L~  212 (483)
                      ++.+.
T Consensus       118 ~~~f~  122 (312)
T d1uira_         118 KRHMP  122 (312)
T ss_dssp             HHHCH
T ss_pred             HhcCc
Confidence            87774


No 72 
>d2ar0a1 c.66.1.45 (A:6-529) M.EcoKI {Escherichia coli [TaxId: 562]}
Probab=76.39  E-value=1.8  Score=43.40  Aligned_cols=74  Identities=12%  Similarity=0.148  Sum_probs=50.8

Q ss_pred             CCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhc-CcCcc----------ccceEE
Q 011546          127 AEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASK-FKNFT----------ESLHIH  195 (483)
Q Consensus       127 ~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~-~p~~~----------~~l~y~  195 (483)
                      ..|-|||+.+|..+.-+++           ......+|++-.||+|.|...+.++++. .....          ....++
T Consensus       142 ~~GqfyTP~~Iv~~mv~ll-----------~~~~~~~i~DPacGsG~fL~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~  210 (524)
T d2ar0a1         142 GAGQYFTPRPLIKTIIHLL-----------KPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFI  210 (524)
T ss_dssp             ---CCCCCHHHHHHHHHHH-----------CCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEE
T ss_pred             ccchhccccchhHhhhhcc-----------cCccchhhcchhhhcchhhHHHHHHHHHhcCcccccchhHHHHHHHhhhh
Confidence            4599999999987654433           1112358999999999999999998864 22211          122588


Q ss_pred             EEecChhhHHHHHHhc
Q 011546          196 LVECSPTLQKLQHHNL  211 (483)
Q Consensus       196 iVE~Sp~Lr~~Q~~~L  211 (483)
                      -+|+++.+...-+-.|
T Consensus       211 G~E~~~~~~~la~~nl  226 (524)
T d2ar0a1         211 GLELVPGTRRLALMNC  226 (524)
T ss_dssp             EEESCHHHHHHHHHHH
T ss_pred             hhccCHHHHHHHHHHH
Confidence            8999999887766554


No 73 
>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}
Probab=73.70  E-value=2.2  Score=36.63  Aligned_cols=65  Identities=17%  Similarity=0.199  Sum_probs=41.4

Q ss_pred             CCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          133 TSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       133 TSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      |=|.-+.+ =|+|-.++...++      ..++++++||+|.++...|..        .+-+++.||.++...+.=++.+.
T Consensus        23 ~RPt~~~v-re~lfn~l~~~~~------~~~vLDlfaGsG~~giealsr--------Ga~~v~~VE~~~~a~~~~k~N~~   87 (183)
T d2fpoa1          23 LRPTTDRV-RETLFNWLAPVIV------DAQCLDCFAGSGALGLEALSR--------YAAGATLIEMDRAVSQQLIKNLA   87 (183)
T ss_dssp             ----CHHH-HHHHHHHHHHHHT------TCEEEETTCTTCHHHHHHHHT--------TCSEEEEECSCHHHHHHHHHHHH
T ss_pred             cCcCcHHH-HHHHHhhhhcccc------hhhhhhhhccccceeeeEEec--------CcceeEEEEEeechhhHHHHHHh
Confidence            44554433 2555566544331      248999999999999765531        12278999999998887776664


No 74 
>d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=73.29  E-value=3.6  Score=37.01  Aligned_cols=60  Identities=15%  Similarity=0.194  Sum_probs=40.4

Q ss_pred             CCChhHHHHHHHHHH---HH-HHHHHcC-CCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecC
Q 011546          134 SPEVSQMFGEMVGVW---AM-CLWEQMG-QPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECS  200 (483)
Q Consensus       134 SpeIs~~FGe~Ia~~---i~-~~w~~~g-~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~S  200 (483)
                      -|+....|....+.+   .. .+.+... .+..-+||++|+|+|+++..|++.   +|+    ++.++.|..
T Consensus        50 ~p~~~~~F~~aM~~~s~~~~~~l~~~~~~f~~~~~vlDiGGG~G~~~~~l~~~---~P~----l~~~v~Dlp  114 (244)
T d1fp1d2          50 DKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISK---YPL----IKGINFDLP  114 (244)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHH---CTT----CEEEEEECH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCcEEEEecCCCcHHHHHHHHH---CCC----CeEEEecch
Confidence            377777887766543   22 2334444 344569999999999999999764   454    367777753


No 75 
>d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=71.30  E-value=4.6  Score=36.02  Aligned_cols=62  Identities=13%  Similarity=0.272  Sum_probs=41.0

Q ss_pred             CCChhHHHHHHHHHHH----HHHHHHcCC-CCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChh
Q 011546          134 SPEVSQMFGEMVGVWA----MCLWEQMGQ-PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT  202 (483)
Q Consensus       134 SpeIs~~FGe~Ia~~i----~~~w~~~g~-p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~  202 (483)
                      -|+....|....+.+-    ..++..... ...-+||++|+|+|+++..|++.   +|+    ++..++|..+.
T Consensus        50 ~p~~~~~F~~aM~~~~~~~~~~~~~~~~~~~~~~~vvDvGGG~G~~~~~l~~~---~P~----l~~~v~Dlp~v  116 (243)
T d1kyza2          50 DPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSK---YPT----IKGINFDLPHV  116 (243)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCSEEEEETCTTSHHHHHHHHH---CTT----SEEEEEECTTT
T ss_pred             CHHHHHHHHHHHhHhhhhHHHHHHHhcccccCCcEEEEecCCCcHHHHHHHHH---CCC----CeEEEcccHHh
Confidence            4677777877665432    234444433 22358999999999999999764   454    46778876543


No 76 
>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}
Probab=68.98  E-value=2.5  Score=39.58  Aligned_cols=62  Identities=23%  Similarity=0.318  Sum_probs=44.8

Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       139 ~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      -.|=|+++.--+.     -.|.+-+|+-+|.|.|..++-+|+.    +   ...++.+||+.|..-+.-++.+.
T Consensus        73 ~~YhE~l~h~pl~-----~~~~pk~VLiiGgG~G~~~r~~l~~----~---~~~~i~~VEIDp~Vi~~a~~~~~  134 (295)
T d1inla_          73 FMYHEMLAHVPMF-----LHPNPKKVLIIGGGDGGTLREVLKH----D---SVEKAILCEVDGLVIEAARKYLK  134 (295)
T ss_dssp             HHHHHHHHHHHHH-----HSSSCCEEEEEECTTCHHHHHHTTS----T---TCSEEEEEESCHHHHHHHHHHCH
T ss_pred             hhhhhhhcchhHh-----hCCCCceEEEecCCchHHHHHHHhc----C---CCceEEEecCCHHHHHHHHHHHH
Confidence            4677777654322     1344569999999999988887642    2   22379999999999998888764


No 77 
>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=67.20  E-value=2.4  Score=39.09  Aligned_cols=72  Identities=17%  Similarity=0.232  Sum_probs=46.9

Q ss_pred             CCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHH
Q 011546          128 EGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ  207 (483)
Q Consensus       128 ~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q  207 (483)
                      .|++-.+..-.-.|-|+++.-.+.     -.|.+-+|+-+|.|.|..+..+|+    .+    ..++.+||+.|.+-+.-
T Consensus        45 dg~~q~~~~de~~Yhe~l~~~~l~-----~~~~p~~vLiiG~G~G~~~~~~l~----~~----~~~v~~VEiD~~Vi~~a  111 (276)
T d1mjfa_          45 DGTVQLVTLGERSYHEPLVHPAML-----AHPKPKRVLVIGGGDGGTVREVLQ----HD----VDEVIMVEIDEDVIMVS  111 (276)
T ss_dssp             TTEEEEETTTTHHHHHHHHHHHHH-----HSSCCCEEEEEECTTSHHHHHHTT----SC----CSEEEEEESCHHHHHHH
T ss_pred             CCceeeeccchhHHHHHhhcchhh-----cCCCCceEEEecCCchHHHHHHHH----hC----CceEEEecCCHHHHHHH
Confidence            344443322234567776542211     134556999999999998888764    22    12689999999999888


Q ss_pred             HHhcc
Q 011546          208 HHNLK  212 (483)
Q Consensus       208 ~~~L~  212 (483)
                      ++.+.
T Consensus       112 ~~~f~  116 (276)
T d1mjfa_         112 KDLIK  116 (276)
T ss_dssp             HHHTC
T ss_pred             HHhhh
Confidence            77663


No 78 
>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}
Probab=64.64  E-value=6.8  Score=35.88  Aligned_cols=73  Identities=21%  Similarity=0.345  Sum_probs=52.3

Q ss_pred             CCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHH
Q 011546          128 EGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ  207 (483)
Q Consensus       128 ~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q  207 (483)
                      .|++-++-.-...|-|+++.-.+.     ..|.+-+|+=+|.|.|..++-+|+.    +   ...++.+||+.|..-+.-
T Consensus        48 Dg~~q~~~~de~~Yhe~l~h~~l~-----~~~~p~~vLiiGgG~G~~~~~~l~~----~---~~~~i~~VEID~~Vi~~a  115 (274)
T d1iy9a_          48 DGMVMTSEKDEFVYHEMVAHVPLF-----THPNPEHVLVVGGGDGGVIREILKH----P---SVKKATLVDIDGKVIEYS  115 (274)
T ss_dssp             TTEEEEETTTHHHHHHHHHHHHHH-----HSSSCCEEEEESCTTCHHHHHHTTC----T---TCSEEEEEESCHHHHHHH
T ss_pred             CCceeeecCchhhchhhhccchhh-----ccCCcceEEecCCCCcHHHHHHHhc----C---CcceEEEecCCHHHHHHH
Confidence            566665544456788888665432     2234459999999999999888752    1   223799999999999988


Q ss_pred             HHhcc
Q 011546          208 HHNLK  212 (483)
Q Consensus       208 ~~~L~  212 (483)
                      ++.+.
T Consensus       116 ~~~~~  120 (274)
T d1iy9a_         116 KKFLP  120 (274)
T ss_dssp             HHHCH
T ss_pred             HHhCh
Confidence            87763


No 79 
>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}
Probab=62.60  E-value=3.3  Score=35.49  Aligned_cols=82  Identities=17%  Similarity=0.094  Sum_probs=50.2

Q ss_pred             CcccCCCCCCCCCCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEE
Q 011546          116 AGFYINRDVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIH  195 (483)
Q Consensus       116 ~GYY~~~~~~G~~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~  195 (483)
                      .|.|..+...-..+ --|=|.-+-+ =|+|-.++...      -...+|+++.||+|.+....|..        .+-+++
T Consensus         5 ~G~~kg~~l~~~~~-~~~RPt~~~v-realFn~l~~~------~~~~~vLDlfaGsG~~g~ea~sr--------Ga~~v~   68 (182)
T d2fhpa1           5 SGEYGGRRLKALDG-DNTRPTTDKV-KESIFNMIGPY------FDGGMALDLYSGSGGLAIEAVSR--------GMDKSI   68 (182)
T ss_dssp             SSTTTTCBCCCCCC-CSSCCCCHHH-HHHHHHHHCSC------CSSCEEEETTCTTCHHHHHHHHT--------TCSEEE
T ss_pred             ccccCCCEecCCCC-CCcCcCcHHH-HHHHHHHHHHh------cCCCEEEEcccccccccceeeec--------chhHHH
Confidence            46776654222222 2344544322 34443333211      12359999999999999876542        123789


Q ss_pred             EEecChhhHHHHHHhccc
Q 011546          196 LVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       196 iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      .||.|+...+..++.+..
T Consensus        69 ~ve~~~~a~~~~~~N~~~   86 (182)
T d2fhpa1          69 CIEKNFAALKVIKENIAI   86 (182)
T ss_dssp             EEESCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhh
Confidence            999999998888887753


No 80 
>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=60.04  E-value=4.9  Score=37.22  Aligned_cols=62  Identities=16%  Similarity=0.317  Sum_probs=44.8

Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       139 ~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      -.|=|+++.-.+     +-.|.+-+|+-+|.|.|.+++.+|+.    +   .-.++.+||+.|..-+.-++.+.
T Consensus        64 ~~Yhe~l~h~~~-----~~~~~pk~VLiiGgG~G~~~r~~l~~----~---~~~~i~~VEiD~~Vi~~~~~~f~  125 (290)
T d1xj5a_          64 CAYQEMITHLPL-----CSIPNPKKVLVIGGGDGGVLREVARH----A---SIEQIDMCEIDKMVVDVSKQFFP  125 (290)
T ss_dssp             HHHHHHHHHHHH-----TTSSCCCEEEEETCSSSHHHHHHTTC----T---TCCEEEEEESCHHHHHHHHHHCH
T ss_pred             hHHHHHHhhHHH-----hhCCCCcceEEecCCchHHHHHHHhc----c---cceeeEEecCCHHHHHHHHHhch
Confidence            355666655432     23456679999999999999888652    1   12279999999999888887763


No 81 
>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=58.32  E-value=4.3  Score=36.87  Aligned_cols=43  Identities=19%  Similarity=0.169  Sum_probs=33.3

Q ss_pred             cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      -+|+++|||.|.++.-+++.        ...+++-||+||..-+.-+++++
T Consensus       109 ~~VlD~~aG~G~~~l~~a~~--------~~~~V~avd~n~~a~~~~~~N~~  151 (260)
T d2frna1         109 ELVVDMFAGIGHLSLPIAVY--------GKAKVIAIEKDPYTFKFLVENIH  151 (260)
T ss_dssp             CEEEETTCTTTTTHHHHHHH--------TCCEEEEECCCHHHHHHHHHHHH
T ss_pred             cEEEECcceEcHHHHHHHHh--------CCcEEEEecCCHHHHHHHHHHHH
Confidence            48999999999999877642        12378999999988777666554


No 82 
>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}
Probab=53.88  E-value=18  Score=31.09  Aligned_cols=45  Identities=13%  Similarity=0.203  Sum_probs=38.2

Q ss_pred             cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhccc
Q 011546          162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC  213 (483)
Q Consensus       162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~~  213 (483)
                      -.+|+.++|+|.....||+.+   |    ..+++-+|.+|.+-+.=+++|..
T Consensus        25 ~~~lD~t~G~Gghs~~il~~~---~----~~~vi~~D~d~~~l~~a~~~l~~   69 (192)
T d1m6ya2          25 KIILDCTVGEGGHSRAILEHC---P----GCRIIGIDVDSEVLRIAEEKLKE   69 (192)
T ss_dssp             CEEEETTCTTSHHHHHHHHHC---T----TCEEEEEESCHHHHHHHHHHTGG
T ss_pred             CEEEEecCCCcHHHHHHHhcC---C----CCeEEEeechHHHHHHHHHhhcc
Confidence            589999999999999998753   2    24789999999999988888865


No 83 
>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}
Probab=52.17  E-value=7.3  Score=36.55  Aligned_cols=73  Identities=15%  Similarity=0.312  Sum_probs=49.2

Q ss_pred             CCCccCCCChhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHH
Q 011546          128 EGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ  207 (483)
Q Consensus       128 ~GDFiTSpeIs~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q  207 (483)
                      .|+.-++-.=-..|=|+++.--+.     ..|.+-+|+-+|.|.|..++.+|+.    +   .-.++.+||+.|..-+.-
T Consensus        79 Dg~~q~~e~de~~YhE~l~h~pl~-----~~~~pk~VLIiGgG~G~~~rellk~----~---~v~~v~~VEID~~Vv~~a  146 (312)
T d2b2ca1          79 DGIVQATERDEFSYQEMLAHLPMF-----AHPDPKRVLIIGGGDGGILREVLKH----E---SVEKVTMCEIDEMVIDVA  146 (312)
T ss_dssp             TTEEEEESSSSSHHHHHHHHHHHH-----HSSSCCEEEEESCTTSHHHHHHTTC----T---TCCEEEEECSCHHHHHHH
T ss_pred             CCceeeecccHHHHHHHhhhHHHh-----cCCCCCeEEEeCCCchHHHHHHHHc----C---CcceEEEEcccHHHHHHH
Confidence            455443322124677877654331     2344559999999999998888642    2   123799999999999988


Q ss_pred             HHhcc
Q 011546          208 HHNLK  212 (483)
Q Consensus       208 ~~~L~  212 (483)
                      ++.+.
T Consensus       147 ~~~~~  151 (312)
T d2b2ca1         147 KKFLP  151 (312)
T ss_dssp             HHHCT
T ss_pred             Hhhch
Confidence            88774


No 84 
>d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=50.97  E-value=8.3  Score=34.43  Aligned_cols=61  Identities=16%  Similarity=0.215  Sum_probs=37.7

Q ss_pred             CCChhHHHHHHHHHHH---HHHHHHc--CCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecCh
Q 011546          134 SPEVSQMFGEMVGVWA---MCLWEQM--GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSP  201 (483)
Q Consensus       134 SpeIs~~FGe~Ia~~i---~~~w~~~--g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp  201 (483)
                      -||....|.+..+.+-   ...+...  .....-+||++|+|+|+++..+++.   +|+    ++.++.|..+
T Consensus        49 ~pe~~~~F~~aM~~~s~~~~~~~~~~~~~~~~~~~vvDvGGG~G~~~~~l~~~---~P~----l~~~v~Dlp~  114 (244)
T d1fp2a2          49 NPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICET---FPK----LKCIVFDRPQ  114 (244)
T ss_dssp             CHHHHHHHHHHHHHTHHHHHHHHHTCHHHHTTCSEEEEETCTTSHHHHHHHHH---CTT----CEEEEEECHH
T ss_pred             CHHHHHHHHHHhhhhhhhhhhhHhhhcccccCceEEEEecCCccHHHHHHHHh---CCC----CeEEEecCHH
Confidence            6777777777654332   1111111  1122348999999999999988654   454    3778888643


No 85 
>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.96  E-value=17  Score=33.21  Aligned_cols=62  Identities=15%  Similarity=0.305  Sum_probs=46.2

Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       139 ~~FGe~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      ..|-|+++.-.+     +..|.+-+++=+|.|.|..++.+|+.    +   ...++.+||+.|..-+.-++.+.
T Consensus        62 ~~Yhe~l~h~~l-----~~~~~pk~vLiiGgG~G~~~~~~l~~----~---~~~~v~~vEiD~~Vv~~a~~~~~  123 (285)
T d2o07a1          62 FSYQEMIANLPL-----CSHPNPRKVLIIGGGDGGVLREVVKH----P---SVESVVQCEIDEDVIQVSKKFLP  123 (285)
T ss_dssp             HHHHHHHHHHHH-----TTSSSCCEEEEEECTTSHHHHHHTTC----T---TCCEEEEEESCHHHHHHHHHHCH
T ss_pred             HHHHHHhccHhh-----hhCcCcCeEEEeCCCchHHHHHHHHc----C---CcceeeeccCCHHHHHHHHhhch
Confidence            567787765432     34455669999999999988888642    2   23489999999999998888774


No 86 
>d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]}
Probab=50.80  E-value=11  Score=31.98  Aligned_cols=43  Identities=19%  Similarity=0.255  Sum_probs=33.5

Q ss_pred             cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      .+++++-||+|.|....|..        .+-++++||.++...+.=++.++
T Consensus        45 ~~vLDlFaGsG~~glEalSR--------GA~~v~fVE~~~~a~~~ik~Ni~   87 (183)
T d2ifta1          45 SECLDGFAGSGSLGFEALSR--------QAKKVTFLELDKTVANQLKKNLQ   87 (183)
T ss_dssp             CEEEETTCTTCHHHHHHHHT--------TCSEEEEECSCHHHHHHHHHHHH
T ss_pred             ceEeecccCccceeeeeeee--------cceeeEEeecccchhhhHhhHHh
Confidence            48999999999999877642        22378999999998777666654


No 87 
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=39.36  E-value=32  Score=31.75  Aligned_cols=54  Identities=15%  Similarity=0.137  Sum_probs=38.4

Q ss_pred             HHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          148 WAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       148 ~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      |+.+..+....+  .+|+++.||+|.++...+..        .+ +++-||.|+..-+.-++++.
T Consensus       122 ~~~~~~~~~~~~--~rVLdlf~~tG~~sl~aa~~--------GA-~V~~VD~s~~al~~a~~N~~  175 (309)
T d2igta1         122 WLKNAVETADRP--LKVLNLFGYTGVASLVAAAA--------GA-EVTHVDASKKAIGWAKENQV  175 (309)
T ss_dssp             HHHHHHHHSSSC--CEEEEETCTTCHHHHHHHHT--------TC-EEEEECSCHHHHHHHHHHHH
T ss_pred             HHHHHHhhccCC--CeEEEecCCCcHHHHHHHhC--------CC-eEEEEeChHHHHHHHHHhhh
Confidence            444455555443  59999999999988776542        12 68899999998777766653


No 88 
>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=27.60  E-value=36  Score=31.18  Aligned_cols=43  Identities=12%  Similarity=0.060  Sum_probs=33.6

Q ss_pred             cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      -+|+++|||+|.++..++..        .+-+++-||+|+..-+.=++++.
T Consensus       147 ~~VLDl~~g~G~~si~~a~~--------ga~~V~~vD~s~~al~~a~~N~~  189 (324)
T d2as0a2         147 DRVLDVFTYTGGFAIHAAIA--------GADEVIGIDKSPRAIETAKENAK  189 (324)
T ss_dssp             CEEEETTCTTTHHHHHHHHT--------TCSEEEEEESCHHHHHHHHHHHH
T ss_pred             CeeecccCcccchhhhhhhc--------CCcEEEeecCCHHHHHHHHHHHH
Confidence            49999999999998876532        12378999999998777666664


No 89 
>d2bm8a1 c.66.1.50 (A:2-233) Cephalosporin hydroxylase CmcI {Streptomyces clavuligerus [TaxId: 1901]}
Probab=25.07  E-value=57  Score=28.55  Aligned_cols=38  Identities=16%  Similarity=0.075  Sum_probs=23.4

Q ss_pred             cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChh
Q 011546          162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT  202 (483)
Q Consensus       162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~  202 (483)
                      -+|||||.++|.=+.=+...++...   ...+++-||+.+.
T Consensus        82 k~ILEIGv~~GgS~~~~a~~l~~~~---~~~kI~giDId~~  119 (232)
T d2bm8a1          82 RTIVELGVYNGGSLAWFRDLTKIMG---IDCQVIGIDRDLS  119 (232)
T ss_dssp             SEEEEECCTTSHHHHHHHHHHHHTT---CCCEEEEEESCCT
T ss_pred             CEEEEECCCCchHHHHHHHHHHhcC---CCceEEecCcChh
Confidence            4899999999864332223333211   2347888998764


No 90 
>d1af7a2 c.66.1.8 (A:92-284) Chemotaxis receptor methyltransferase CheR, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=24.37  E-value=88  Score=25.95  Aligned_cols=50  Identities=2%  Similarity=-0.048  Sum_probs=31.5

Q ss_pred             CCcEEEEEcCCcchhHHHHHHHHhcCcC-ccccceEEEEecChhhHHHHHH
Q 011546          160 NRVNLVELGPGRGTLMADLLRGASKFKN-FTESLHIHLVECSPTLQKLQHH  209 (483)
Q Consensus       160 ~~~~IvEiGaG~GtLa~DIL~~l~~~p~-~~~~l~y~iVE~Sp~Lr~~Q~~  209 (483)
                      .+++|...|||+|.=+.-|.-.+...+. -...+++.=.++|+..-+.-++
T Consensus        24 ~~lrIwsaGCstGeE~YSlA~~l~e~~~~~~~~~~I~atDi~~~~l~~A~~   74 (193)
T d1af7a2          24 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARS   74 (193)
T ss_dssp             SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHH
T ss_pred             CCeEEEEeCCCCchhHHHHHHHHHHhhhhcCCceEEEeecCChHHhhHhhc
Confidence            4689999999999865555444432111 1234567777999876544443


No 91 
>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}
Probab=22.69  E-value=38  Score=30.96  Aligned_cols=42  Identities=14%  Similarity=0.120  Sum_probs=32.4

Q ss_pred             cEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       162 ~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      -+|++++||+|.++..+.+.         ..+++-||+|+..-+.=+++++
T Consensus       147 ~rVLDl~~gtG~~s~~~a~g---------~~~V~~vD~s~~al~~a~~n~~  188 (318)
T d1wxxa2         147 ERALDVFSYAGGFALHLALG---------FREVVAVDSSAEALRRAEENAR  188 (318)
T ss_dssp             EEEEEETCTTTHHHHHHHHH---------EEEEEEEESCHHHHHHHHHHHH
T ss_pred             CeeeccCCCCcHHHHHHHhc---------CCcEEeecchHHHHHHHHHHHH
Confidence            49999999999998665321         1268889999998777776664


No 92 
>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}
Probab=22.36  E-value=47  Score=30.22  Aligned_cols=58  Identities=17%  Similarity=0.114  Sum_probs=37.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCCcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhc
Q 011546          142 GEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL  211 (483)
Q Consensus       142 Ge~Ia~~i~~~w~~~g~p~~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L  211 (483)
                      .+.+-.++.++.   +....-+|+|+-||.|++..-+.+.   .      -+++-||.++..-+.-+++.
T Consensus       197 ~e~l~~~v~~~~---~~~~~~~vlDLycG~G~fsl~La~~---~------~~V~gvE~~~~ai~~A~~na  254 (358)
T d1uwva2         197 NQKMVARALEWL---DVQPEDRVLDLFCGMGNFTLPLATQ---A------ASVVGVEGVPALVEKGQQNA  254 (358)
T ss_dssp             HHHHHHHHHHHH---TCCTTCEEEEESCTTTTTHHHHHTT---S------SEEEEEESCHHHHHHHHHHH
T ss_pred             hhHHHHHHHHhh---ccCCCceEEEecccccccchhcccc---c------cEEEeccCcHHHHHHHHHhH
Confidence            344444444433   2222348999999999998776431   1      26899999998866544443


No 93 
>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}
Probab=21.30  E-value=55  Score=24.45  Aligned_cols=36  Identities=11%  Similarity=0.143  Sum_probs=24.4

Q ss_pred             CCCCCCCCChHHHHHHHHHHHhhcCCcccHHHHHHH
Q 011546           74 PEHSHERKLESELVKHLKGIIKFRGGPISVAEYMEE  109 (483)
Q Consensus        74 ~~~~~~~~~~~~L~~~i~~~I~~~~GpIsf~~FM~~  109 (483)
                      |.....+.+...+.+.+.+.=....|-|+|.+||.+
T Consensus        42 ~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l   77 (93)
T d1ksoa_          42 ATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRS   77 (93)
T ss_dssp             TTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHH
T ss_pred             hcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHH
Confidence            444444445566777776665556699999999864


No 94 
>d2py6a1 c.66.1.56 (A:14-408) Methyltransferase FkbM {Methylobacillus flagellatus [TaxId: 405]}
Probab=20.18  E-value=60  Score=30.76  Aligned_cols=47  Identities=15%  Similarity=0.198  Sum_probs=34.0

Q ss_pred             CcEEEEEcCCcchhHHHHHHHHhcCcCccccceEEEEecChhhHHHHHHhcc
Q 011546          161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK  212 (483)
Q Consensus       161 ~~~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~~~L~  212 (483)
                      .-.+|++||-.|.-..-++.....     ...+++.+|++|...+.-++.++
T Consensus       213 n~vfIDVGAniG~~s~~f~~~~~~-----~~~kV~aFEP~p~n~~~LkkNi~  259 (395)
T d2py6a1         213 SEKMVDCGASIGESLAGLIGVTKG-----KFERVWMIEPDRINLQTLQNVLR  259 (395)
T ss_dssp             SCEEEEETCTTSHHHHHHHHHHTS-----CCSEEEEECCCHHHHHHHHHHHH
T ss_pred             CCEEEECCcCCCHHHHHHHHhcCC-----CCCEEEEEeCCHHHHHHHHHHHH
Confidence            358999999999876665554321     11278999999999887766654


Done!