Query 011547
Match_columns 483
No_of_seqs 200 out of 718
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 02:34:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011547.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011547hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1959 Glycosyl hydrolase, fa 100.0 1.6E-91 3.4E-96 731.8 29.9 436 19-473 481-995 (996)
2 PLN02701 alpha-mannosidase 100.0 3.1E-72 6.6E-77 629.8 38.9 404 19-472 528-1050(1050)
3 KOG1958 Glycosyl hydrolase, fa 100.0 1.9E-55 4.1E-60 462.3 21.7 410 2-471 622-1128(1129)
4 PF07748 Glyco_hydro_38C: Glyc 100.0 3.4E-39 7.5E-44 341.1 29.7 369 21-468 2-457 (457)
5 PRK09819 alpha-mannosidase; Pr 99.8 2.2E-16 4.9E-21 178.8 36.0 248 19-289 383-707 (875)
6 KOG4342 Alpha-mannosidase [Car 94.4 0.11 2.5E-06 55.4 7.3 33 130-163 713-745 (1078)
7 PF07481 DUF1521: Domain of Un 41.2 1E+02 0.0023 27.7 6.6 53 132-192 9-62 (171)
8 PF10102 DUF2341: Domain of un 37.1 1.9E+02 0.004 23.4 7.1 49 44-112 4-53 (89)
9 PF14849 YidC_periplas: YidC p 21.2 93 0.002 30.2 3.3 25 133-157 2-26 (270)
10 smart00557 IG_FLMN Filamin-typ 12.3 5.1E+02 0.011 20.5 5.1 33 45-98 35-67 (93)
No 1
>KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-91 Score=731.75 Aligned_cols=436 Identities=44% Similarity=0.688 Sum_probs=362.9
Q ss_pred cceEEEEeCCCceeeeeEEEEEecCCcEEEECCCCCeEEEEEEecchhhhhhhccceecccCCCCCCCceEEEEEEEecC
Q 011547 19 VARFSLFDDLFRITCGFLKLLQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVP 98 (483)
Q Consensus 19 ~~~vvvfN~L~~~r~~~~V~v~V~~~~~~V~D~~G~~V~~QI~p~~~~~~~~~~~~~~~~~g~~~~~~~~~eL~F~a~vP 98 (483)
+-.++|||||+|.++++ |||||+.++++|.|++|++|++||+|+......+.- .....+|+|+|.|+||
T Consensus 481 ~~~v~~YNpLa~~~t~~-VRiPV~~~~~~V~D~~G~~v~Sqivp~~~~~~al~~----------~~~~~~~eLvf~asvp 549 (996)
T KOG1959|consen 481 NFIVTLYNPLAHTVTQY-VRIPVKEENYRVTDEKGRTVPSQIVPVPWQVLALES----------RNNDTKHELVFKASVP 549 (996)
T ss_pred cEEEEEEcCCcceeeeE-EEEeccCCCeEEECCCCCCcccceeccchhhhhhhc----------cccCCCceEEEEEEec
Confidence 34689999999999999 999999999999999999999999999877655532 2245689999999999
Q ss_pred CCeEEEEEEEecCCCCCCcceeeeeeccCCCCCceEEccceEEEEEeCCCCeEEEEEeccCcceeeEEEEEEEEecCCCC
Q 011547 99 PLGFSTYTVSIAKPTGPSSTISMVYTSEDSTSNSIEVGQGNLRLLYSADEGKLTHYVNNRNKVTASAGQSYSYYSGNDGT 178 (483)
Q Consensus 99 pLG~~tY~V~~~~~~~~~~~~s~~~~~~~~~~~~~~IeN~~l~v~fd~~tG~L~si~~k~~g~~~~~~~~f~~Y~~~~G~ 178 (483)
|+||++|.|++..+....+ .+..............|+|+++++.||.+||+|+++....+|.+..|.|+|++|..+.|+
T Consensus 550 plg~aty~i~k~~~~~~~~-~~~~~~i~~~~~n~~~V~n~~~kl~fd~~tG~l~~v~~n~t~~t~~V~Q~f~~Y~~~~g~ 628 (996)
T KOG1959|consen 550 PLGIATYFIKKVASTERGS-ASHVRNIKKRESNATEVGNSHLKLVFDNDTGLLKTVEMNQTGVTENVDQEFGYYKGYRGD 628 (996)
T ss_pred CccceEEEEeecCcccccc-cccccccccccCcceEeccceEEEEEcCCCCceEEEEecccCcceeeeeeeEEEEeecCC
Confidence 9999999999755433210 000000111222348899999999999999999999988899999999999999998886
Q ss_pred CCCCCCCCcEEEccCCCeeeecCC-CeEEEEEEcCceEEEEEEeeceEEE------------------------------
Q 011547 179 DKDPQASGAYVFRPNDTFSINSES-QVQLTIVRGPLLDEVHQQLSPWISQ------------------------------ 227 (483)
Q Consensus 179 ~~~~~~sGAYiF~P~~~~~~~~~~-~~~i~v~~G~l~~ev~~~~~~~i~~------------------------------ 227 (483)
+ +.|+||||+||| +..+++... ...++++.|+|+.||||+|+.||+|
T Consensus 629 n-~~q~SgAYiFRp-~~~~~~~~~~~vel~vv~G~LV~EVhQ~f~~wiSQviRvy~g~~~~E~Ew~VGpIp~~d~~gkEv 706 (996)
T KOG1959|consen 629 N-DKQASGAYIFRP-GQADIPIVSDQVELTVVDGPLVKEVHQQFNPWISQVIRVYEGKNHVEFEWLVGPIPIDDGIGKEV 706 (996)
T ss_pred c-CCccCcceEecC-CCCCccccccceEEEEecCchHHHHHHHHHHHHhheeEecCCCcceEEEEEecceecCCCccceE
Confidence 4 459999999999 554444333 5899999999999999999999887
Q ss_pred --------------------------eeccccccccccccccccceEeecceEEEEeCceeEEEEeecccccccccCceE
Q 011547 228 --------------------------IRDFRTDWDLQVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLVDGQI 281 (483)
Q Consensus 228 --------------------------~r~~r~~~~~~~~~pv~~NyYPv~s~~~i~D~~~rltvltdrs~G~sSl~~G~l 281 (483)
+||+|++|.++.++|||||||||++.|||||+++||+||+||||||||+.||+|
T Consensus 707 Vtr~~t~i~S~g~fYTDSNGRe~~kR~~d~r~~~~~~~~epiAGNYYPvt~~i~lqD~~~rl~vL~DRAqGgsSl~dG~l 786 (996)
T KOG1959|consen 707 VTRFSTEISSNGVFYTDSNGREMIKRVRDKREDFVLDVNEPIAGNYYPVTSRIYLQDSKKRLSVLNDRAQGGSSLKDGQL 786 (996)
T ss_pred EEEeccccccCceEEecCcHHHHHHHHhcccCCCccccCccccccccccceeeEEecCCceEEEEeecccCCccccCCeE
Confidence 678999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeeeccCccCcccccccceeccccccCeEEEeEEEEEeccCCCcc-cccccchhhhccCceEEeeccCCCccccc
Q 011547 282 ELMLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQGKFYLRIDHLGEGA-NWRRSVGQEIYSPLLLAFTEQDGDNWMNS 360 (483)
Q Consensus 282 E~MlhRRl~~DD~rGvge~l~e~~~~~~~~~gl~v~~~~~l~l~~~~~~~-~~~r~~~~~~~~p~~~~~~~~~~~~~~~~ 360 (483)
|+||||||+.||+|||||+|||+.++ ..||+++|+|++.|+...+.+ ..+|..+++++.|.+.+|+......+.+.
T Consensus 787 ElMLHRRl~~DD~~Gv~EaLnEt~~~---~~gL~~rGk~~~~l~~~~d~a~~~~r~~~~ei~~P~~~~f~~~~~~~~~~~ 863 (996)
T KOG1959|consen 787 ELMLHRRLLNDDGRGVGEALNETVYG---HAGLIARGKLYVLLDKAGDGATGWRRLAEQEIHLPLWKFFSKPEGGEALNS 863 (996)
T ss_pred EEEeeehhhcccccccchhccccccc---ccceEEeeeEEEEEecccccchhhhhhhhhhcccHHHHHhhcCCCccchhh
Confidence 99999999999999999999999984 389999999999999887776 66777789999999999987655444433
Q ss_pred ccccccCCCcCCCCCCceEEEEeee----------------CCCCCCceeeEeeccccCCCCccceEEEeccccccchhh
Q 011547 361 HVSTFSGIDSFYNLPSNIAIITLQT----------------GEDKDYSVLTSVELKKLFPNKKISKVTEMNLSANQERAT 424 (483)
Q Consensus 361 ~~~~~s~l~~~~~lP~~vhlltl~~----------------~~d~~~s~~~~v~l~~lf~~~~i~~i~EtsLt~~~~~~~ 424 (483)
.....+.++....||.+||||||++ |||+.++++++|||++||..+.+..|+||||+||+++++
T Consensus 864 ~s~~~~~f~~~~~lP~~vhLlTLe~~~~~~vLlRleh~~e~gED~~~s~vvsfnl~~lf~~~~i~~i~EttL~gN~~ls~ 943 (996)
T KOG1959|consen 864 LSIPGSAFSGSYDLPQSVHLLTLEEWSKDEVLLRLEHLYEVGEDSELSQVVSFNLRKLFSALDIVEIRETTLDGNQPLSD 943 (996)
T ss_pred cCCCccccccccCCCcceeeeecccCCCCceEeeehhhhhcccccccCcceEEEhHHhhcccCeeEEEEeeccCccChhh
Confidence 2222222332357999999999998 899999999999999999999999999999999999999
Q ss_pred hhccceeeeec--CCcc--ccceeccCCCCCC-CCceEEecCceeEEEEEEEee
Q 011547 425 MEKKRLAWKVE--GSAE--EETKVVRGGPVDP-ATLVVELAPMEIRTFFIDFDR 473 (483)
Q Consensus 425 ~~~~r~~w~~~--~~~~--~~~~~~~~~~~~~-~~~~v~L~PmeIrTf~i~~~~ 473 (483)
| +|++|+.. |..+ ......+..+.++ +.+.|+|.|||||||+|++++
T Consensus 944 m--kr~k~~~~~~G~~~~~~~~~~s~~~p~~~~~~~~vtL~PmeIRTfii~~~~ 995 (996)
T KOG1959|consen 944 M--KRFKFHWDVSGEKPSGVEYSTSRHKPLDKTSEFIVTLHPMEIRTFIIKFQQ 995 (996)
T ss_pred h--hhhccccCCCCCCCCCccccccCCCCCCcccceEEEEeccEEEEEEEEEec
Confidence 9 77776654 3222 2223345555664 688999999999999998764
No 2
>PLN02701 alpha-mannosidase
Probab=100.00 E-value=3.1e-72 Score=629.81 Aligned_cols=404 Identities=25% Similarity=0.397 Sum_probs=307.9
Q ss_pred cceEEEEeCCCceeeeeEEEEEecCCcEEEECCCCCeEEEEEEecchhhhhhhccceecccCCCCCCCceEEEEEEEecC
Q 011547 19 VARFSLFDDLFRITCGFLKLLQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVP 98 (483)
Q Consensus 19 ~~~vvvfN~L~~~r~~~~V~v~V~~~~~~V~D~~G~~V~~QI~p~~~~~~~~~~~~~~~~~g~~~~~~~~~eL~F~a~vP 98 (483)
..+|+|||||+|.|+++ |+|+|+.+.++|+|++|++|++||+|+|..... ......|+|.|.|+||
T Consensus 528 ~~~vvvfNpL~~~r~~v-V~v~V~~~~~~V~d~~g~~v~~Qi~~~~~~~~~-------------~~~~~~~~l~F~a~vP 593 (1050)
T PLN02701 528 AHRVVFFNPLEQTREEV-VMVVVDRPAVCVFDSNWTCVPSQISPEWQHDGE-------------KLFTGRHRLYWKASVP 593 (1050)
T ss_pred ceEEEEECCCCceeeEE-EEEEecCCcEEEEcCCCCEEeEEEecccccccc-------------ccccceEEEEEEEecC
Confidence 35799999999999999 999999999999999999999999999753210 0134579999999999
Q ss_pred CCeEEEEEEEecCCCCCCcceee--------------eeeccCCCCCceEEccceEEEEEeCCCCeEEEEEeccCcceee
Q 011547 99 PLGFSTYTVSIAKPTGPSSTISM--------------VYTSEDSTSNSIEVGQGNLRLLYSADEGKLTHYVNNRNKVTAS 164 (483)
Q Consensus 99 pLG~~tY~V~~~~~~~~~~~~s~--------------~~~~~~~~~~~~~IeN~~l~v~fd~~tG~L~si~~k~~g~~~~ 164 (483)
||||++|+|....+.......+. .+.........++|||++++|+||+.||+|++|+++.+|.+..
T Consensus 594 plG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~lkl~Fd~~TG~L~si~~~~~g~~~~ 673 (1050)
T PLN02701 594 ALGLETYFIANGNVSCEKAVPAKLKVFNSDDKFPCPEPYSCSKLEGDTVEISNSHQTLGFDVKTGLLRKIKIHKNGSETV 673 (1050)
T ss_pred CceeEEEEEEEcCCCcccccccccccccccccccccccccccccCCCcEEEecCeEEEEEcCCCCceeEEEecccCceec
Confidence 99999999987543221000000 0100111234689999999999999999999999999999999
Q ss_pred EEEEEEEEecCCCCCCCCCCCCcEEEccCCC-eeeecCCCeEEEEEEcCceEEEEEEe-----eceEEE-----------
Q 011547 165 AGQSYSYYSGNDGTDKDPQASGAYVFRPNDT-FSINSESQVQLTIVRGPLLDEVHQQL-----SPWISQ----------- 227 (483)
Q Consensus 165 ~~~~f~~Y~~~~G~~~~~~~sGAYiF~P~~~-~~~~~~~~~~i~v~~G~l~~ev~~~~-----~~~i~~----------- 227 (483)
+.++|.+|.+ +.||||+|+|++. .|+. .....+.+++||++++|++.+ +.|++|
T Consensus 674 v~q~f~~Y~s--------~~SGAYiFrP~~~~~p~~-~~~~~~~v~~Gplv~eV~~~~~~~~~~s~isQ~iRLY~~~~~~ 744 (1050)
T PLN02701 674 VGEEIGMYSS--------QGSGAYLFKPDGEAQPIV-QAGGLVVVSEGPLVQEVHSVPKTKWEKSPLSRSTRLYHGGKSV 744 (1050)
T ss_pred ceeeeeeecC--------CCCcceEEcCCCCCcccC-CCCceEEEEeCCEEEEEEEEeecccCCcceEEEEEEecCCCcc
Confidence 9999999976 2489999999876 3443 233456788999999999986 346655
Q ss_pred -----------------------eecccccc-----------cc-------ccccccccceEeecceEEEEe-CceeEEE
Q 011547 228 -----------------------IRDFRTDW-----------DL-------QVNQLVAGNYYPVNLGIYVQD-DNAELSL 265 (483)
Q Consensus 228 -----------------------~r~~r~~~-----------~~-------~~~~pv~~NyYPv~s~~~i~D-~~~rltv 265 (483)
+-+|.++. ++ ..++|+|||||||+++||||| +++||||
T Consensus 745 ~~~~vE~e~~V~~ip~d~~~kEii~R~~T~i~s~~~FYTDsNG~qm~kR~~~~~~Pv~gNYYPv~s~a~IqD~~~~rltv 824 (1050)
T PLN02701 745 QDLSVEKEYHVELLGHDFNDKELIVRFKTDIDNKRVFYSDLNGFQMSRRETYDKIPLQGNYYPMPSLAFLQGSNGQRFSV 824 (1050)
T ss_pred ccceEEEEEEecCcccCCCCcEEEEEEeecccCCCeEEEcCccceeeeecccccCccccccccccceEEEEcCCCCeEEE
Confidence 00111110 01 146899999999999999999 6699999
Q ss_pred EeecccccccccCceEEEEEEEeeeccCccCcccccccceeccccccCeEEEeEEEEEeccCCCc------------ccc
Q 011547 266 LVDRSVGGSSLVDGQIELMLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQGKFYLRIDHLGEG------------ANW 333 (483)
Q Consensus 266 ltdrs~G~sSl~~G~lE~MlhRRl~~DD~rGvge~l~e~~~~~~~~~gl~v~~~~~l~l~~~~~~------------~~~ 333 (483)
+||||||||||++|+|||||||||++||+|||||||+|++. +..+|+|+||+.... +..
T Consensus 825 ltdrs~G~sSl~~GqLEiMLhRRLl~DD~rGvge~l~dnk~---------~~~~f~ll~e~~~~~~~~~~~~~~~~~Sl~ 895 (1050)
T PLN02701 825 HSRQSLGVASLKNGWLEIMLDRRLVQDDGRGLGQGVMDNRP---------MNVVFHLLLESNISSSPPASNPLPLQPSLL 895 (1050)
T ss_pred EeccCcccccCCCcEEEEEEEeecccccCcccccccccccc---------ccceEEEEEecccccCCCCCCCCcCCccHH
Confidence 99999999999999999999999999999999999999997 458999999976532 112
Q ss_pred cccchhhhccCceEEeeccCCC-cccccccccccCCCcCCCCCCceEEEEeee-----------------------CCCC
Q 011547 334 RRSVGQEIYSPLLLAFTEQDGD-NWMNSHVSTFSGIDSFYNLPSNIAIITLQT-----------------------GEDK 389 (483)
Q Consensus 334 ~r~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~s~l~~~~~lP~~vhlltl~~-----------------------~~d~ 389 (483)
.|..+..+.+|++++++..... ........+|++|.+ +||||+||||||+ |+||
T Consensus 896 sh~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~--~lpcD~hlv~lrt~~~~~~~~~~~~~~~~~~~l~r~~~d~ 973 (1050)
T PLN02701 896 SHRVGAHLNYPMHAFLAKKPQATSVENPQDTSFAPLAK--PLPCDLHIVNFKVPRPSKYSQQEAEDPRFGLLLQRRGWDS 973 (1050)
T ss_pred HHHHHHhhcCCchhhcccCccccccccccccccccccC--CCCCcEEEEEeeccCCcccccccCCCccEEEEEEecccCc
Confidence 4455677889999887432211 111112368888876 9999999999995 7888
Q ss_pred CCce------e---eE-eeccccCCCCccceEEEeccccccchhhhhccceeeeecCCccccceeccCCCCCCCCceEEe
Q 011547 390 DYSV------L---TS-VELKKLFPNKKISKVTEMNLSANQERATMEKKRLAWKVEGSAEEETKVVRGGPVDPATLVVEL 459 (483)
Q Consensus 390 ~~s~------~---~~-v~l~~lf~~~~i~~i~EtsLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~L 459 (483)
.++. + .+ |+|.+||.++.+.++++||||+.+...++ +.+...- ..+. ....|.|
T Consensus 974 ~~~~~~~~~c~~~~~~~~~~~~lf~~l~~~~~~~tsl~~~~~~~~~----~~~~~~~----------~~~~--~~~~i~l 1037 (1050)
T PLN02701 974 SYCRKGGTQCTTLANEPVNLFDMFKDLAVSKVKATSLNLLHDDAEM----LGYRKQA----------GSAA--QEGIVLI 1037 (1050)
T ss_pred ccccCCCccCcccCCcccchhhhhcccceeeeecccccccccchhh----ccccccc----------cccC--Cccceee
Confidence 6532 1 23 99999999999999999999999987766 2221110 0111 1337999
Q ss_pred cCceeEEEEEEEe
Q 011547 460 APMEIRTFFIDFD 472 (483)
Q Consensus 460 ~PmeIrTf~i~~~ 472 (483)
.||||+||+++++
T Consensus 1038 ~pmei~~~~~~~~ 1050 (1050)
T PLN02701 1038 SPMEIQAYKLDLR 1050 (1050)
T ss_pred ccceeeeEEEecC
Confidence 9999999999874
No 3
>KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-55 Score=462.26 Aligned_cols=410 Identities=27% Similarity=0.376 Sum_probs=305.0
Q ss_pred CCCCCCCCc-ceeEEcccc---ceEEEEeCCCceeeeeEEEEEecCCcEEEECCCCCeEEEEEEecchhhhhhhccceec
Q 011547 2 EEGGSSTNS-SEEIVYPFV---ARFSLFDDLFRITCGFLKLLQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKA 77 (483)
Q Consensus 2 ~~~~~~~~~-~~~~~~~~~---~~vvvfN~L~~~r~~~~V~v~V~~~~~~V~D~~G~~V~~QI~p~~~~~~~~~~~~~~~ 77 (483)
++.-.+.++ |||.|+.-+ ..||+||||.+.|.++ |+|.|+.|.+.|.|..|.+|++||+|+|..+...
T Consensus 622 d~~r~~~~~~pek~~~~~~~~~~~vvlfN~l~q~R~ev-v~i~V~sp~V~V~~d~g~pv~~Qispvw~~~~tk------- 693 (1129)
T KOG1958|consen 622 DDIRDSEDSLPEKTVIGLSSGPRSVVLFNPLEQEREEV-VTIRVNSPEVSVLDDGGVPVEAQISPVWQDTKTK------- 693 (1129)
T ss_pred hhcccCCCcCcccceeeccCCCceEEEeccchhhhhcc-EEEEecCCeeEEEcCCCceeeEeeccceeccccc-------
Confidence 333333333 366665543 4699999999999999 9999999999999999999999999999632110
Q ss_pred ccCCCCCCCceEEEEEEEecCCCeEEEEEEEecCCCCCCcceee--------eeec--cCCCCCceEEccceEEEEEeCC
Q 011547 78 YLGKAPSETLKYWLAFSASVPPLGFSTYTVSIAKPTGPSSTISM--------VYTS--EDSTSNSIEVGQGNLRLLYSAD 147 (483)
Q Consensus 78 ~~g~~~~~~~~~eL~F~a~vPpLG~~tY~V~~~~~~~~~~~~s~--------~~~~--~~~~~~~~~IeN~~l~v~fd~~ 147 (483)
......|+|+|.|+|||||..+|++..+........++. ++.. ........+++|++..+.||++
T Consensus 694 -----~~~~~~~~l~f~a~vpplgl~v~~~~~~~~~~~~~l~s~~~~~~~~~~~s~~~~~~~~~~s~~~~~~~~l~fd~~ 768 (1129)
T KOG1958|consen 694 -----TIKPGSYRLSFKATVPPLGLMVLRIDSGGLTEHAKLPSKDTSFPAWDLGSSSTIGDSRELSTLRNEYFELRFDPE 768 (1129)
T ss_pred -----eeecceeEEEEEEecccceeeEEEeeccCcccccccccCCCCcccCCCccceeecCccccceeeccceeEEeccc
Confidence 113347999999999999999999987632221111100 0000 0011123489999999999999
Q ss_pred CCeEEEEEeccCcceeeEEEEEEEEecCCCCCCCCCCCCcEEEccCCC-eeeecCCCeEEEEEEcCceEEEEEEeeceEE
Q 011547 148 EGKLTHYVNNRNKVTASAGQSYSYYSGNDGTDKDPQASGAYVFRPNDT-FSINSESQVQLTIVRGPLLDEVHQQLSPWIS 226 (483)
Q Consensus 148 tG~L~si~~k~~g~~~~~~~~f~~Y~~~~G~~~~~~~sGAYiF~P~~~-~~~~~~~~~~i~v~~G~l~~ev~~~~~~~i~ 226 (483)
+|+|+++..+.++....+...|..|....+. ..||||+|+|+|. +|+.....+.+++ +|+|++||.+.+.+.+.
T Consensus 769 ~G~i~~~~~~~D~~~~~~q~~f~~y~~~~~~----~~sgaylf~p~G~a~~~i~~~~p~v~v-~g~L~qev~~~~~~v~~ 843 (1129)
T KOG1958|consen 769 TGTIKSINSLSDNKHFESQVSFSNYGERISG----DESGAYLFLPDGNAKPIIELQWPHVRV-KGPLVQEVSQFLKNVLH 843 (1129)
T ss_pred cchhhhhhhcccCCCcccceeeccccccccC----CCCceEEEccCCCCCCceecCCCeEEe-ecceeeeeccccchHHH
Confidence 9999999988899999999999999765443 3599999999997 6755555677888 99999999987765321
Q ss_pred E--------------------ee---c------cccccc-----------c-------ccccccccceEeecceEEEEeC
Q 011547 227 Q--------------------IR---D------FRTDWD-----------L-------QVNQLVAGNYYPVNLGIYVQDD 259 (483)
Q Consensus 227 ~--------------------~r---~------~r~~~~-----------~-------~~~~pv~~NyYPv~s~~~i~D~ 259 (483)
+ ++ | +.++|+ + ..+.|+++|||||++++||||.
T Consensus 844 ~~~~~~~~~~G~~vei~~~vdi~~~~n~Ela~R~st~vds~~~FyTDlnG~Q~~kR~~~~KlPlQaNyYPmpt~a~Iq~~ 923 (1129)
T KOG1958|consen 844 RLSQNVRGYSGEEVEISNSVDIRKEDNTELAMRFSTDVDSGDLFYTDLNGMQMIKRRRLDKLPLQANYYPMPTAAFIQDA 923 (1129)
T ss_pred hchhheeccCCcceeeeceeecccccchhhhhhhhhcccCCceeeeccchhhhhhhhhcccCcccceeecccceeeeecC
Confidence 1 22 1 122221 1 2589999999999999999999
Q ss_pred ceeEEEEeecccccccccCceEEEEEEEeeeccCccCcccccccceeccccccCeEEEeEEEEEeccCCCccc-------
Q 011547 260 NAELSLLVDRSVGGSSLVDGQIELMLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQGKFYLRIDHLGEGAN------- 332 (483)
Q Consensus 260 ~~rltvltdrs~G~sSl~~G~lE~MlhRRl~~DD~rGvge~l~e~~~~~~~~~gl~v~~~~~l~l~~~~~~~~------- 332 (483)
+.||++++.|++|++||.+|+||||+||||.+||+||||||+.||++ +...|+|++++.+..+.
T Consensus 924 ~~RlsihS~q~lGvssL~sG~iEIm~DRrL~~DD~rGLgqGv~DNk~---------t~~~frlv~e~~~s~~~p~e~~~~ 994 (1129)
T KOG1958|consen 924 KQRLSIHSAQSLGVSSLESGQIEIMLDRRLNQDDGRGLGQGVIDNKP---------TDMKFRLVLESLNSAQDPTENSRV 994 (1129)
T ss_pred CceEEEEeecccCccccccceEEEEecccccCCCCccccccccccch---------hhheeeeeecccccccCchhcCCC
Confidence 99999999999999999999999999999999999999999999997 45889999998754211
Q ss_pred -----ccccchhhhccCceEEeeccCCCcccccccccccCCCcCCCCCCceEEEEeee------------------CCCC
Q 011547 333 -----WRRSVGQEIYSPLLLAFTEQDGDNWMNSHVSTFSGIDSFYNLPSNIAIITLQT------------------GEDK 389 (483)
Q Consensus 333 -----~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~s~l~~~~~lP~~vhlltl~~------------------~~d~ 389 (483)
..+...+.+++|++.++... .++... ...|.++.. +||||+||+||++ +.||
T Consensus 995 ~~ps~~ah~a~~~l~yP~~~f~~~~--pk~i~~-~g~~~~~~~--~lpcDl~lvt~rtl~~~~~~~~~~~lil~R~~~~c 1069 (1129)
T KOG1958|consen 995 SYPSLAAHLASQSLNYPLMKFIYAE--PKKIED-QGIFEPLNL--SLPCDLHLVTFRTLESSKAAEKRAALILHRHATDC 1069 (1129)
T ss_pred CChhhhhhcccceecCCchhhcccC--CCChhh-ccccccccC--CCccceeEEEeeeccCcccccccceeeeeeccccc
Confidence 12334466888888776222 222222 345666654 8999999999998 5666
Q ss_pred CCc-----eeeEeeccccCCCCccceEEEeccccccchhhhhccceeeeecCCccccceeccCCCCCCCCceEEecCcee
Q 011547 390 DYS-----VLTSVELKKLFPNKKISKVTEMNLSANQERATMEKKRLAWKVEGSAEEETKVVRGGPVDPATLVVELAPMEI 464 (483)
Q Consensus 390 ~~s-----~~~~v~l~~lf~~~~i~~i~EtsLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~L~PmeI 464 (483)
..+ ...++++.+|+.. +.+++.|+|++.+..... . + .....++||||
T Consensus 1070 ~~~~~g~c~~~ki~~~~ll~~--~~~v~~tsLs~l~~~~~~----------------------~--~--~~~~~~~pme~ 1121 (1129)
T KOG1958|consen 1070 RSQKKGTCGQLKISVMDLLIK--AKSVKKTSLSLLQEVGGI----------------------I--G--VEEQELSPMEI 1121 (1129)
T ss_pred ccccccccccccCcHHHHHHH--HHhhchhhHHhhhhcccC----------------------C--C--ccccccccccc
Confidence 442 2336778888887 789999999998875443 0 0 11445699999
Q ss_pred EEEEEEE
Q 011547 465 RTFFIDF 471 (483)
Q Consensus 465 rTf~i~~ 471 (483)
++|.+.+
T Consensus 1122 ~~~l~~~ 1128 (1129)
T KOG1958|consen 1122 SAFLTSL 1128 (1129)
T ss_pred ccccccc
Confidence 9998764
No 4
>PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). This domain is found at the C terminus of glycosyl hydrolases from family 38.; GO: 0015923 mannosidase activity, 0006013 mannose metabolic process; PDB: 2WYI_A 2WYH_A 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=100.00 E-value=3.4e-39 Score=341.06 Aligned_cols=369 Identities=26% Similarity=0.406 Sum_probs=233.2
Q ss_pred eEEEEeCCCceeeeeEEEEEecCCcEEEECCCCCeEEEEEEecchhhhhhhccceecccCCCCCCCceEEEEEEEecCCC
Q 011547 21 RFSLFDDLFRITCGFLKLLQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVPPL 100 (483)
Q Consensus 21 ~vvvfN~L~~~r~~~~V~v~V~~~~~~V~D~~G~~V~~QI~p~~~~~~~~~~~~~~~~~g~~~~~~~~~eL~F~a~vPpL 100 (483)
+|+|||||+|+|+++ |+|+|..+.+.|.|.+|++|++|++|... ....++|.|.++||||
T Consensus 2 ~vvvfN~l~~~r~~v-v~i~v~~~~~~~~~~~g~~v~~qi~~~~~-------------------~~~~~~l~f~~~vPal 61 (457)
T PF07748_consen 2 PVVVFNPLPWPRSEV-VEIPVNTPNVSVYDADGKPVPSQIIPEPY-------------------STGRYELLFVVDVPAL 61 (457)
T ss_dssp EEEEEE-SSS-EEEE-EEEEEEECEEEEECSTSHEEHCEEEEEEE-------------------EEEEEEEEEEEEE-TT
T ss_pred EEEEEECCCCcEEEE-EEEEeccCceEEEecCCcEeeEEEEeccC-------------------CCCceEEEEEeccCCc
Confidence 689999999999999 99999999999999999999999999211 2357899999999999
Q ss_pred eEEEEEEEecCCCCCCcceeeeeeccCCCCCceEEccceEEEEEeCCCCeEEEEEeccCcceee--EEEEEEEEecCCCC
Q 011547 101 GFSTYTVSIAKPTGPSSTISMVYTSEDSTSNSIEVGQGNLRLLYSADEGKLTHYVNNRNKVTAS--AGQSYSYYSGNDGT 178 (483)
Q Consensus 101 G~~tY~V~~~~~~~~~~~~s~~~~~~~~~~~~~~IeN~~l~v~fd~~tG~L~si~~k~~g~~~~--~~~~f~~Y~~~~G~ 178 (483)
||++|+|..++......... .. ...++..|||++|+|+||+.+|.|.+|++|++|+++. ...+|.+|.+..++
T Consensus 62 Gy~~~~i~~~~~~~~~~~~~-~~----~~~~~~~leN~~~~v~~~~~tG~i~sl~dk~~g~~~~~~~~~~~~~y~~~~~~ 136 (457)
T PF07748_consen 62 GYKTYRIVEGESSEPSNEAS-IA----KDSGDNVLENEFYKVTFDPNTGGIKSLYDKKTGREYVDQDGNDFYIYEDIDGD 136 (457)
T ss_dssp EEEEEEEEECSS--TTC--C-EE----ETT-TTEEETSSEEEEE-TTTSSEEEEEETTTS-EEEEEECEEEEEEEBTTSC
T ss_pred eeEEEEeeccccccccccce-ee----cceeeEEEEccEEEEEEeCCCCeEEEEEEccCCeEEEeecCCceeEecccccc
Confidence 99999999977554311000 00 0013478999999999998779999999999999998 88999999885444
Q ss_pred CC----CCCCCCcEEEccCCCeeee--cCCC----------------------eEEEEEEcCceEEEEEEeeceEE--E-
Q 011547 179 DK----DPQASGAYVFRPNDTFSIN--SESQ----------------------VQLTIVRGPLLDEVHQQLSPWIS--Q- 227 (483)
Q Consensus 179 ~~----~~~~sGAYiF~P~~~~~~~--~~~~----------------------~~i~v~~G~l~~ev~~~~~~~i~--~- 227 (483)
.. ..+.+|+|+|+|+|+.... .... ..+++..|.-.=+++..+.+|.. .
T Consensus 137 ~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~i~~~i~L~~~~~~ie~~~~vdn~~~~~~~ 216 (457)
T PF07748_consen 137 YDISPLELQRSGAYLFVEDGPLRSSIRVEYKFELPKNLSLVKRSEQTGSSRITQTIRLYKGSPRIEFETEVDNWAEDHRK 216 (457)
T ss_dssp TTE-SCCCGSEECCEEEEESSSEEEEEEEEEEEEESCBECEEEESCEEEEEEEEEEEEETTESSEEEEEEEEE-TTSCEE
T ss_pred ccccccccccCceEEEEecCCceEEEEEEEEEeccCCcEEEEEEEeccceEEEEEEEEecCceEEEEEEEecccccCCce
Confidence 21 1336899999998872111 0000 01111222211111112221210 0
Q ss_pred -e-ecccc-----------cccc-------ccccccccceEeecceEEEEeCceeEEEEeeccccccccc-CceEEEEEE
Q 011547 228 -I-RDFRT-----------DWDL-------QVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLV-DGQIELMLH 286 (483)
Q Consensus 228 -~-r~~r~-----------~~~~-------~~~~pv~~NyYPv~s~~~i~D~~~rltvltdrs~G~sSl~-~G~lE~Mlh 286 (483)
+ ..|.+ .|++ ..+.|+++|||||++.+||.|.+.+|+|+||+++|.+++. +|+||||||
T Consensus 217 ~l~~~f~t~i~~~~~~~~~~fG~~~r~~~~~~~~~~~~~~~p~~~~~~v~~~~~~l~i~~d~~~g~~~~~~~g~l~ltL~ 296 (457)
T PF07748_consen 217 ELRVRFPTNIDSDEAFYDDQFGFIERKRPTHPNTPWEANYYPVPSHAFVDDSDSRLAILNDGKYGYESLDQDGELELTLL 296 (457)
T ss_dssp EEEEEEEES-S-TCEEEEESTTEEEEECESSTTTTCGGG-EEECSCCEEEECSECEEEEESS-EEEEECTTTTEEEEEEE
T ss_pred eEEEEeecCCCCCCEEEECCCCeEEecCCccccCCcccccCCCcceEEEEcCCCCEEEEcCCCcceEeccCCCeEEEEEe
Confidence 0 00000 0111 2347899999999999999999988999999999999998 999999999
Q ss_pred EeeeccCccCcccccccceeccccccCeEEEeEEEEEeccCCCcccccccchhhhccCceEEeeccCCCccccccccccc
Q 011547 287 RRLLHDDVRGVGEVLNETVCVQNECEGLTIQGKFYLRIDHLGEGANWRRSVGQEIYSPLLLAFTEQDGDNWMNSHVSTFS 366 (483)
Q Consensus 287 RRl~~DD~rGvge~l~e~~~~~~~~~gl~v~~~~~l~l~~~~~~~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~s 366 (483)
||+.+||++|++ + |+|++...........+.+..+.+|++++.... . .......++
T Consensus 297 R~~~~D~g~~~~----~----------------~~l~~~~~~~~~~~~~~~a~~l~~Pl~~~~~~~---~-~~~~~~~~~ 352 (457)
T PF07748_consen 297 RRPSQDDGRGVF----R----------------YALYPHSGSWDEADVVQEAYELNQPLIVFNSSN---I-QARQLNSFS 352 (457)
T ss_dssp EEBSCG-SSSEE----C----------------CEEEEEEEEEEEEECHHCHHHHTS-EEEESS-----T-TBEE--CE-
T ss_pred ecccccCCccEE----E----------------EEEEEeccccccccchhhhhhccCccEEeeccc---c-ccccccCCC
Confidence 999999999987 1 233332221111111233457889988762111 0 111122333
Q ss_pred CCCc-CCCCCCceEEEEe-----eeCCCC-------------------C----C-cee---eEeeccccCCCCccceEEE
Q 011547 367 GIDS-FYNLPSNIAIITL-----QTGEDK-------------------D----Y-SVL---TSVELKKLFPNKKISKVTE 413 (483)
Q Consensus 367 ~l~~-~~~lP~~vhlltl-----~~~~d~-------------------~----~-s~~---~~v~l~~lf~~~~i~~i~E 413 (483)
++.. ...+|+++|+.+| ++.+|. . + +.+ +++++.++|....+..+.|
T Consensus 353 ~~~~~~~~~~~~~~~~~l~~sa~K~aed~~~~~~~~ilR~~n~~~~~~~~~~~~~~~~~~~~~~~~~~lle~~~~~~i~e 432 (457)
T PF07748_consen 353 GLSLPPEESPLNIHLLNLVVSALKKAEDGSDWSDGLILRLYNPSGKETEASLDFLSKPLSGAEVNLVNLLEEPDIEEIEE 432 (457)
T ss_dssp TCS--SSEESTCECEEEEEEEEEEECTTTSEEETCEEEEEEESSSSTCCCTTCCTSCCTEEEEEEEESTTSSSCEEEEEE
T ss_pred cccccccccccccCCCcccccccccccccccccCCEEEEEEecCCCccccccccCCccceeEEEEecccccCCCccceEe
Confidence 3321 1247888888887 332222 1 1 223 6788889998888889999
Q ss_pred eccccccchhhhhccceeeeecCCccccceeccCCCCCCCCceEEecCceeEEEE
Q 011547 414 MNLSANQERATMEKKRLAWKVEGSAEEETKVVRGGPVDPATLVVELAPMEIRTFF 468 (483)
Q Consensus 414 tsLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~L~PmeIrTf~ 468 (483)
|++++.... ....++|+|||||||+
T Consensus 433 ~s~~~~~~~------------------------------~~~~~~l~P~EIkT~r 457 (457)
T PF07748_consen 433 TSLSDPSES------------------------------NSVELTLKPFEIKTFR 457 (457)
T ss_dssp E-SEEEESC------------------------------GGTCSEE-TTEEEEEE
T ss_pred eccCCCCCC------------------------------CEeEEEEeCcEEEEEC
Confidence 995432111 1237899999999996
No 5
>PRK09819 alpha-mannosidase; Provisional
Probab=99.79 E-value=2.2e-16 Score=178.85 Aligned_cols=248 Identities=13% Similarity=0.200 Sum_probs=163.2
Q ss_pred cceEEEEeCCCceeeeeEEEEEe--cCCcEEEECCCCCeEEEEEEecchhhhhhhccceecccCCCCCCCceEEEEEEE-
Q 011547 19 VARFSLFDDLFRITCGFLKLLQV--SSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSA- 95 (483)
Q Consensus 19 ~~~vvvfN~L~~~r~~~~V~v~V--~~~~~~V~D~~G~~V~~QI~p~~~~~~~~~~~~~~~~~g~~~~~~~~~eL~F~a- 95 (483)
+..++|||||+|+|+++ |++++ ..+.+.|.|.+|++|++|+.........+..+.... .+. .....+++|.|.+
T Consensus 383 ~~~~~vfN~l~~~r~~~-v~i~~~~~~~~~~~~d~~g~~v~~~v~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~i~f~~~ 459 (875)
T PRK09819 383 ADKLTVFNLLPYEREEV-INTTVYLPASQFTLRDDRGNPLPYTIREKRDIDPGLLDRQIVH-YGN-YDPFMEFDIQINVQ 459 (875)
T ss_pred CCEEEEEcCCCccceeE-EEEEEEeccCCEEEECCCCCEeeEEEeeccccccchhhcceec-cCC-CCceEEEEEEEEEC
Confidence 57899999999999999 77655 567899999999999999986543222111100000 000 0011257899985
Q ss_pred ecCCCeEEEEEEEecCCCCCCcceeeeeeccCCCCCceEEccceEEEEEeCCCCeEEEEEeccCcceeeEEEEEEEEecC
Q 011547 96 SVPPLGFSTYTVSIAKPTGPSSTISMVYTSEDSTSNSIEVGQGNLRLLYSADEGKLTHYVNNRNKVTASAGQSYSYYSGN 175 (483)
Q Consensus 96 ~vPpLG~~tY~V~~~~~~~~~~~~s~~~~~~~~~~~~~~IeN~~l~v~fd~~tG~L~si~~k~~g~~~~~~~~f~~Y~~~ 175 (483)
+||||||++|.+......... .........|||++|+|+||+ +|.| +|.||.+|+++ .+++.|++
T Consensus 460 ~vP~lG~~~~~i~~~~~~~~~---------~~~~~~~~~ieN~~~~v~i~~-~G~l-~l~dk~~gr~~---~~~~~~~d- 524 (875)
T PRK09819 460 ILPAMGYRTLYIELNEEGNVI---------EPKSSAEGIIENEFYQITLNE-NGTL-TIVDKKSGKTY---DRQLIIEE- 524 (875)
T ss_pred CCCCcccEEEEEEeCCccccc---------cccccccceEecCcEEEEEec-CCcE-EEEECCCCcEE---eceEEEEe-
Confidence 899999999999865432110 001224568999999999995 7999 69999999986 45677775
Q ss_pred CCCCCCCCCCCcEEEccCC-CeeeecCC-CeEEEEEEcCceEEEEEEeec------------------eEEE--------
Q 011547 176 DGTDKDPQASGAYVFRPND-TFSINSES-QVQLTIVRGPLLDEVHQQLSP------------------WISQ-------- 227 (483)
Q Consensus 176 ~G~~~~~~~sGAYiF~P~~-~~~~~~~~-~~~i~v~~G~l~~ev~~~~~~------------------~i~~-------- 227 (483)
.|+ .|+||.|.|.. +..+.... .+.+.+.+|++..++.+...- .+.+
T Consensus 525 ~~d-----~gD~yd~~p~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~~~~~~p~~~~~r~~~~~~~~~~i~~~i~L~~~s 599 (875)
T PRK09819 525 NGD-----DGDEYDYSPPREDWVITSAEAVPSVEISHSAWQSRAVIRYRLAVPKNLEERAAGQKTGRMPVKLVVTLSKNS 599 (875)
T ss_pred cCc-----CCCCcccCCCCCCCEEeccCCcceEEEEEcCCeEEEEEEEEEeCCcChhhHhhccccceEEEEEEEEEecCC
Confidence 455 38999999854 34343322 356788889988777765430 1111
Q ss_pred ------------eecccc--cc-----------ccc---ccccccc----------------ceEeecceEEEEeCceeE
Q 011547 228 ------------IRDFRT--DW-----------DLQ---VNQLVAG----------------NYYPVNLGIYVQDDNAEL 263 (483)
Q Consensus 228 ------------~r~~r~--~~-----------~~~---~~~pv~~----------------NyYPv~s~~~i~D~~~rl 263 (483)
.+++|- -| +.+ .+.|... +-||+-+.+.+.|.+..+
T Consensus 600 ~~i~~~~~vdw~~~~~~Lrv~fp~~i~~~~~~~d~~fG~i~Rp~~~~~~~~W~~~~~~e~p~~~~~~~~~v~ls~~~~Gv 679 (875)
T PRK09819 600 RRIDFDVNLDNQADDHRLRVLFPTEIASKFSLADQQFGSITRPVNDPAMDVWEQEGWQEAPISIEPMQSFVALHDERHGV 679 (875)
T ss_pred CEEEEEEEEeccccceEEEEEccCCCCCCceEcCCCceEEECCCcCccccccccccceeCCCCChhhhceEEEecCCceE
Confidence 111110 00 000 1222221 347999999999999999
Q ss_pred EEEeecccccccccC--ceEEEEEEEee
Q 011547 264 SLLVDRSVGGSSLVD--GQIELMLHRRL 289 (483)
Q Consensus 264 tvltdrs~G~sSl~~--G~lE~MlhRRl 289 (483)
+|+||--.|-.-..+ +.|-|=|=|--
T Consensus 680 all~dg~~ey~v~g~~~~~i~LTLlRs~ 707 (875)
T PRK09819 680 AVFTEGVREYEIIGENYDTIALTLFRGV 707 (875)
T ss_pred EEECCCcceEEEecCCCCeEEEEeeccc
Confidence 999999888776543 36888776664
No 6
>KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=94.41 E-value=0.11 Score=55.44 Aligned_cols=33 Identities=24% Similarity=0.405 Sum_probs=28.4
Q ss_pred CCceEEccceEEEEEeCCCCeEEEEEeccCccee
Q 011547 130 SNSIEVGQGNLRLLYSADEGKLTHYVNNRNKVTA 163 (483)
Q Consensus 130 ~~~~~IeN~~l~v~fd~~tG~L~si~~k~~g~~~ 163 (483)
.+.+++.|+.++|.+++ +|.|.||++...|++.
T Consensus 713 Dd~~~L~Ng~lrV~i~p-~G~itSl~d~~~grE~ 745 (1078)
T KOG4342|consen 713 DDSVTLDNGILRVKIDP-TGRITSLVDVASGREA 745 (1078)
T ss_pred CCeEEEECCEEEEEECC-CCceeeeeehhcccch
Confidence 36789999999999998 7999999997777654
No 7
>PF07481 DUF1521: Domain of Unknown Function (DUF1521); InterPro: IPR011086 This domain of unknown function is found in a limited set of Bradyrhizobium proteins. There appears to be a periodic -DG- motif in the domain.
Probab=41.18 E-value=1e+02 Score=27.74 Aligned_cols=53 Identities=9% Similarity=0.113 Sum_probs=37.2
Q ss_pred ceEEc-cceEEEEEeCCCCeEEEEEeccCcceeeEEEEEEEEecCCCCCCCCCCCCcEEEcc
Q 011547 132 SIEVG-QGNLRLLYSADEGKLTHYVNNRNKVTASAGQSYSYYSGNDGTDKDPQASGAYVFRP 192 (483)
Q Consensus 132 ~~~Ie-N~~l~v~fd~~tG~L~si~~k~~g~~~~~~~~f~~Y~~~~G~~~~~~~sGAYiF~P 192 (483)
.-+|+ ++.|+++++..++.+. |+++.+|....+.=+-++..+ |+ ..-++.|.-
T Consensus 9 kati~lgd~Y~I~~~e~ds~~~-itnk~tG~~TriwGDPHvd~~--Gd-----g~~~fDFk~ 62 (171)
T PF07481_consen 9 KATIDLGDGYTIEANEKDSEWT-ITNKQTGETTRIWGDPHVDAD--GD-----GKTDFDFKG 62 (171)
T ss_pred eeEEecCCceEEEecCCcceEE-EecCCCCcEeEEeCCCccccC--CC-----cccceeecC
Confidence 44677 7889999998788996 999999998766555554322 22 123688873
No 8
>PF10102 DUF2341: Domain of unknown function (DUF2341); InterPro: IPR018765 This domain of unknown function is found in various bacterial proteins, including MotA/TolQ/ExbB proton channels and other transport proteins.
Probab=37.07 E-value=1.9e+02 Score=23.39 Aligned_cols=49 Identities=14% Similarity=0.201 Sum_probs=34.7
Q ss_pred CcEEEECCCCCeEEEEEEecchhhhhhhccceecccCCCCCCCceEEEEEEEe-cCCCeEEEEEEEecCC
Q 011547 44 EKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSAS-VPPLGFSTYTVSIAKP 112 (483)
Q Consensus 44 ~~~~V~D~~G~~V~~QI~p~~~~~~~~~~~~~~~~~g~~~~~~~~~eL~F~a~-vPpLG~~tY~V~~~~~ 112 (483)
.+++++|.+|.++|++|..-.. ......|.+++. +|+ +-++.+|--+..
T Consensus 4 ~DIRf~d~~~~~L~ywIE~wd~-------------------~~~~A~iWVkvp~i~~-~~~~i~lyyGn~ 53 (89)
T PF10102_consen 4 SDIRFYDSDGTPLPYWIESWDP-------------------TNEQALIWVKVPSIPA-GSTTIYLYYGNP 53 (89)
T ss_pred ccEEEEeCCCCEeEEEEEECCC-------------------CCCeEEEEEECCCCCC-CCcEEEEEECCC
Confidence 5688999999999999987321 112345666664 788 878888877654
No 9
>PF14849 YidC_periplas: YidC periplasmic domain; PDB: 3BS6_B 3BLC_B.
Probab=21.24 E-value=93 Score=30.17 Aligned_cols=25 Identities=12% Similarity=0.315 Sum_probs=20.2
Q ss_pred eEEccceEEEEEeCCCCeEEEEEec
Q 011547 133 IEVGQGNLRLLYSADEGKLTHYVNN 157 (483)
Q Consensus 133 ~~IeN~~l~v~fd~~tG~L~si~~k 157 (483)
++|||+.++++|+..-|.|+++..|
T Consensus 2 v~ven~~~~~~~s~~GG~i~~~~Lk 26 (270)
T PF14849_consen 2 VTVENDLFKVTFSSKGGRIKSVELK 26 (270)
T ss_dssp EEEE-SS-EEEEETBTTEEEEEEEE
T ss_pred EEEECCCEEEEEECCCCeEEEEEcC
Confidence 6899999999999888999988764
No 10
>smart00557 IG_FLMN Filamin-type immunoglobulin domains. These form a rod-like structure in the actin-binding cytoskeleton protein, filamin. The C-terminal repeats of filamin bind beta1-integrin (CD29).
Probab=12.26 E-value=5.1e+02 Score=20.52 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=24.3
Q ss_pred cEEEECCCCCeEEEEEEecchhhhhhhccceecccCCCCCCCceEEEEEEEecC
Q 011547 45 KVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVP 98 (483)
Q Consensus 45 ~~~V~D~~G~~V~~QI~p~~~~~~~~~~~~~~~~~g~~~~~~~~~eL~F~a~vP 98 (483)
.+.|.+++|+.++.+|.... +..|.+.|....+
T Consensus 35 ~v~i~~p~g~~~~~~v~d~~---------------------dGty~v~y~P~~~ 67 (93)
T smart00557 35 EVEVTGPSGKKVPVEVKDNG---------------------DGTYTVSYTPTEP 67 (93)
T ss_pred EEEEECCCCCeeEeEEEeCC---------------------CCEEEEEEEeCCC
Confidence 56788999999999987743 2467777776655
Done!