Query 011547
Match_columns 483
No_of_seqs 200 out of 718
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 10:24:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011547.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011547hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bvx_A Alpha-mannosidase 2; fa 100.0 1.5E-66 5.3E-71 592.8 39.8 399 19-472 552-1044(1045)
2 1o7d_D Lysosomal alpha-mannosi 100.0 3.3E-57 1.1E-61 440.0 20.3 216 132-353 2-273 (282)
3 2wyh_A Alpha-mannosidase; hydr 100.0 1.2E-32 4.2E-37 311.7 34.9 325 21-389 425-865 (923)
4 3lvt_A Glycosyl hydrolase, fam 99.9 1.3E-25 4.4E-30 253.0 34.5 331 19-389 403-840 (899)
5 1o7d_E Lysosomal alpha-mannosi 99.9 2.8E-23 9.7E-28 178.5 9.9 102 363-473 3-122 (126)
6 1o7d_C Lysosomal alpha-mannosi 99.5 2.4E-14 8.2E-19 128.8 11.2 73 19-112 79-151 (159)
7 2dmc_A Filamin-B; beta-sandwic 11.4 1.5E+02 0.0052 23.8 3.0 21 45-65 48-68 (116)
8 2dlg_A Filamin-B; beta-sandwic 10.9 2.2E+02 0.0075 22.2 3.7 21 45-65 34-54 (102)
9 3e8v_A Possible transglutamina 10.1 1E+02 0.0036 23.4 1.4 16 45-60 4-20 (82)
10 1iwm_A Outer membrane lipoprot 9.8 4.5E+02 0.015 22.8 5.8 34 19-56 59-92 (186)
No 1
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ...
Probab=100.00 E-value=1.5e-66 Score=592.76 Aligned_cols=399 Identities=21% Similarity=0.350 Sum_probs=311.3
Q ss_pred cceEEEEeCCCceeeeeEEEEEecCCcEEEECCCCCeEEEEEEecchhhhhhhccceecccCCCCCCCceEEEEEEEecC
Q 011547 19 VARFSLFDDLFRITCGFLKLLQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVP 98 (483)
Q Consensus 19 ~~~vvvfN~L~~~r~~~~V~v~V~~~~~~V~D~~G~~V~~QI~p~~~~~~~~~~~~~~~~~g~~~~~~~~~eL~F~a~vP 98 (483)
+..++|||||+|.|+++ |+|+|..+.+.|+|++|++|++|++|++.....+..... +.......|+|+|.|+||
T Consensus 552 ~~~vvvfN~L~~~r~~~-V~v~v~~~~~~V~D~~G~~v~~Qi~~~~~~~~~~~~~~~-----~~~~~~~~~~L~f~a~vP 625 (1045)
T 3bvx_A 552 SKHVVMHNTLPHWREQL-VDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTI-----HPQGSTTKYRIIFKARVP 625 (1045)
T ss_dssp EEEEEEEECSSSCEEEE-EEEEESCSCEEEEETTCCEECEEEEEEEEEEEETTTTEE-----EEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEcCCCcceeeE-EEEEeccCceEEEcCCCCEEeEEEeeccccccccccccc-----cccCCCCcEEEEEEeccC
Confidence 44799999999999999 999999999999999999999999998764322210000 000023568999999999
Q ss_pred CCeEEEEEEEecCCCCCCcceee--eee-------c--cCCCCCceEEccceE------EEEEeCCCCeEEEEEeccCcc
Q 011547 99 PLGFSTYTVSIAKPTGPSSTISM--VYT-------S--EDSTSNSIEVGQGNL------RLLYSADEGKLTHYVNNRNKV 161 (483)
Q Consensus 99 pLG~~tY~V~~~~~~~~~~~~s~--~~~-------~--~~~~~~~~~IeN~~l------~v~fd~~tG~L~si~~k~~g~ 161 (483)
||||++|+|..+.........+. ++. . .....+...|||++| +|+||+ +|.|++|++|++|+
T Consensus 626 ~lG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~leN~~~~~~~~~~v~fd~-~G~L~si~dk~~g~ 704 (1045)
T 3bvx_A 626 PMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSE-QGLLKSIQLTQDSP 704 (1045)
T ss_dssp TTEEEEEEEEECSSCCTTEEECEEEEECSSCCCCCCTTCSSCCEEECCCCEEEECTTSCEEEECT-TSCEEEEECSTTSC
T ss_pred CceeEEEEEEecCCccccccccceeecccccccccccccccCCCceeecccccccccccEEEECC-CCcEEEEEEcCCCe
Confidence 99999999987654322011111 110 0 001223578999999 999998 99999999999999
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCCCcEEEccCCC-eeeecCCCeEEEEEEcCceEEEEEEeeceEEE-ee----------
Q 011547 162 TASAGQSYSYYSGNDGTDKDPQASGAYVFRPNDT-FSINSESQVQLTIVRGPLLDEVHQQLSPWISQ-IR---------- 229 (483)
Q Consensus 162 ~~~~~~~f~~Y~~~~G~~~~~~~sGAYiF~P~~~-~~~~~~~~~~i~v~~G~l~~ev~~~~~~~i~~-~r---------- 229 (483)
++.+.++|.+|.+..|. +.||||+|+|++. .++.. ..+.+.+++|||+++|++.+ .|++| +|
T Consensus 705 e~~~~~~f~~Y~~~~~~----~~sgaY~F~P~~~~~~~~~-~~~~~~v~~Gpl~~ev~~~~-~~i~q~irL~~~~ieie~ 778 (1045)
T 3bvx_A 705 HVPVHFKFLKYGVRSHG----DRSGAYLFLPNGPASPVEL-GQPVVLVTKGKLESSVSVGL-PSVVHQTIMRGGAPEIRN 778 (1045)
T ss_dssp CEEEEEEEEEECBCSSS----CCCCSSCCCBSSSCEECCC-CSCCEEEEECSSCEEEEEEE-TTEEEEEEESSSSCEEEE
T ss_pred EEEEeeEEEEEecccCC----CCCcceEecCCCCCccccc-CCceEEEEeCCeEEEEEEEE-eeEEEEEEECCeeEEEEE
Confidence 99999999999875543 3699999999887 44433 35678899999999999988 56654 11
Q ss_pred --------------ccccc-------------cc-----cccccccccceEeecceEEEEeCceeEEEEeeccccccccc
Q 011547 230 --------------DFRTD-------------WD-----LQVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLV 277 (483)
Q Consensus 230 --------------~~r~~-------------~~-----~~~~~pv~~NyYPv~s~~~i~D~~~rltvltdrs~G~sSl~ 277 (483)
.|.++ ++ .+.++|++||||||+++|+|+|++.||+|++||||||||++
T Consensus 779 ~Vd~~~~~~~el~~rf~t~i~s~~~fyTD~nG~~~ikR~~~~~~p~~~NyYPv~s~~~i~D~~~~ltvl~drs~G~sSl~ 858 (1045)
T 3bvx_A 779 LVDIGSLDNTEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLDKLPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLA 858 (1045)
T ss_dssp EECCTTCTTEEEEEEEEECCCCTTEEEEEETTTEEEEEECCTTSCGGGGCEEESSEEEEECSSEEEEEEESSCEEEECCS
T ss_pred EEecCCCCCeEEEEEeecccCCCCeEEEecCCceeEEcCCCCCCCcccceEEeeeeEEEEcCCeeEEEEecCCccccccC
Confidence 01110 11 12468999999999999999999999999999999999999
Q ss_pred CceEEEEEEEeeeccCccCcccccccceeccccccCeEEEeEEEEEeccCCCcc------------cccccchhhhccCc
Q 011547 278 DGQIELMLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQGKFYLRIDHLGEGA------------NWRRSVGQEIYSPL 345 (483)
Q Consensus 278 ~G~lE~MlhRRl~~DD~rGvge~l~e~~~~~~~~~gl~v~~~~~l~l~~~~~~~------------~~~r~~~~~~~~p~ 345 (483)
+|+|||||||||++||+|||||||+|+. +++++|||+|++....+ ...|..++++.+|+
T Consensus 859 ~G~lElmlhRrl~~DD~rGvge~l~d~~---------~~~~~~~l~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~p~ 929 (1045)
T 3bvx_A 859 SGELEIMQDRRLASDDERGLGQGVLDNK---------PVLHIYRLVLEKVNNCVRPSKLHPAGYLTSAAHKASQSLLDPL 929 (1045)
T ss_dssp TTEEEEEEEEEBCSCCSSSCCSCBCCCC---------CEEEEEEEEEEECTTSCCCCTTCSEECCCHHHHHHHHHHHSCC
T ss_pred CCeEEEEEeeeeccCCcccccccccCCc---------eeeeEEEEEEecccccccccccccccccCHHHHHHHHHHhCCc
Confidence 9999999999999999999999999965 48899999999875433 13466778899999
Q ss_pred eEEeeccCCCcccccccccccCCCcCCCCCCceEEEEeee------------------CCCCCC---ceeeEeeccccCC
Q 011547 346 LLAFTEQDGDNWMNSHVSTFSGIDSFYNLPSNIAIITLQT------------------GEDKDY---SVLTSVELKKLFP 404 (483)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~s~l~~~~~lP~~vhlltl~~------------------~~d~~~---s~~~~v~l~~lf~ 404 (483)
+++++... .+. ....+|+++.. +||||||||||++ +.||.. +.+++|||++||.
T Consensus 930 ~~~~~~~~--~~~-~~~~~~~~l~~--~lP~~vhlltL~~~~~~~~~~~~~ll~L~~~~~~~~~~~~s~~~~~~l~~lf~ 1004 (1045)
T 3bvx_A 930 DKFIFAEN--EWI-GAQGQFGGDHP--SAREDLDVSVMRRLTKSSAKTQRVGYVLHRTNLMQCGTPEEHTQKLDVCHLLP 1004 (1045)
T ss_dssp EEEEECSS--CCT-TBCSEECTTSC--CCCTTEEEEEEEECSCTTCSEEEEEEEEEECCCCCCSCCCCCCCCCCGGGSSS
T ss_pred ceeeccCc--ccc-cccccCCcccc--cCCCCEEEEEeEecCCCCccCceEEEEEeeeccccCcCcccCcccccHHHHhc
Confidence 99886532 222 24567888765 9999999999988 134433 5788999999999
Q ss_pred CCccceEEEeccccccchhhhhccceeeeecCCccccceeccCCCCCCCCceEEecCceeEEEEEEEe
Q 011547 405 NKKISKVTEMNLSANQERATMEKKRLAWKVEGSAEEETKVVRGGPVDPATLVVELAPMEIRTFFIDFD 472 (483)
Q Consensus 405 ~~~i~~i~EtsLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~L~PmeIrTf~i~~~ 472 (483)
. |.+++||||||+++++++. +.+.|+|+|||||||+|+++
T Consensus 1005 ~--i~~~~etsL~~~~~~~~~~--------------------------~~~~v~l~PmeirTf~i~~~ 1044 (1045)
T 3bvx_A 1005 N--VARCERTTLTFLQNLEHLD--------------------------GMVAPEVCPMETAAYVSSHS 1044 (1045)
T ss_dssp S--EEEEEEECTTSCSEEEECG--------------------------GGCCCCCCTTCEEEEEEEEE
T ss_pred C--cceEEEecccCCccccccC--------------------------CCcceEEcCceeEEEEEEee
Confidence 8 9999999999999886651 13478999999999999986
No 2
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=100.00 E-value=3.3e-57 Score=440.01 Aligned_cols=216 Identities=38% Similarity=0.635 Sum_probs=194.9
Q ss_pred ceEEccceEEEEEeCCCCeEEEEEeccCcceeeEEEEEEEEecCCCCCCCCCCCCcEEEccCCCeeeecCCCeEEEEEEc
Q 011547 132 SIEVGQGNLRLLYSADEGKLTHYVNNRNKVTASAGQSYSYYSGNDGTDKDPQASGAYVFRPNDTFSINSESQVQLTIVRG 211 (483)
Q Consensus 132 ~~~IeN~~l~v~fd~~tG~L~si~~k~~g~~~~~~~~f~~Y~~~~G~~~~~~~sGAYiF~P~~~~~~~~~~~~~i~v~~G 211 (483)
+++|+|+++++.||+.||+|++|+++++|.+++|.|+|+||.+..|++.+.+.||||+|+|+++.+......+.+.+++|
T Consensus 2 ~~~i~n~~~~l~fd~~tG~L~si~~~~~g~~~~v~q~f~~Y~s~~g~~~~~~~SGAYiFrP~g~~~~~~~~~~~~~v~~G 81 (282)
T 1o7d_D 2 DLVIQNEYLRARFDPNTGLLMELENLEQNLLLPVRQAFYWYNASTGNNLSSQASGAYIFRPNQNKPLFVSHWAQTHLVKA 81 (282)
T ss_dssp CCEEECSSEEEEECTTTCSEEEEEEC---CEEECEEEEEEEEBCCCBTTBSCCCCSSCCCBSSSSCEESCSCCEEEEEEC
T ss_pred cEEEcCceEEEEECCCCCcEEEEEEcCCCeEEEEeEEEEEEecccCCCCCCCCCceEEecCCCCCCcccCCCcEEEEEEC
Confidence 46899999999999989999999999999999999999999998777656789999999999986555556688999999
Q ss_pred CceEEEEEEeeceEEE--------------------------------------------------------eecccccc
Q 011547 212 PLLDEVHQQLSPWISQ--------------------------------------------------------IRDFRTDW 235 (483)
Q Consensus 212 ~l~~ev~~~~~~~i~~--------------------------------------------------------~r~~r~~~ 235 (483)
||++||++.+++|++| ++++|++|
T Consensus 82 ~lv~eV~~~~~~~~sq~~Rly~~~~~vE~e~~Vgpipi~d~~~kEiv~r~~T~i~s~~~FYTDsNG~e~~kR~~~~r~~~ 161 (282)
T 1o7d_D 82 SLVQEVHQNFSAWCSQVVRLYPRQRHLELEWTVGPIPVGDGWGKEVISRFDTALATRGLFYTDSNGREILERRRNYRPTW 161 (282)
T ss_dssp SSCEEEEEEEETTEEEEEEECTTCSSEEEEEEECCCCCTTSCCEEEEEEEECCCCCTTEEEEESTTSSEEEEETTCCSSS
T ss_pred CEEEEEEEEECCcEEEEEEEecCCceEEEEEEEccccccCCCCcEEEEEEEeeeccCCeEEECCCCceeeEEEecccccc
Confidence 9999999999999876 45678899
Q ss_pred ccccccccccceEeecceEEEEeCceeEEEEeecccccccccCceEEEEEEEeeeccCccCcccccccceeccccccCeE
Q 011547 236 DLQVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLVDGQIELMLHRRLLHDDVRGVGEVLNETVCVQNECEGLT 315 (483)
Q Consensus 236 ~~~~~~pv~~NyYPv~s~~~i~D~~~rltvltdrs~G~sSl~~G~lE~MlhRRl~~DD~rGvge~l~e~~~~~~~~~gl~ 315 (483)
+++.++|+|||||||+++|||+|++.||+|++|||||||||++|+|||||||||++||+|||||||+|+ ++||+
T Consensus 162 ~~~~~~pv~gNYYPv~s~~~IqD~~~rltvl~drs~G~sSl~~G~lElMlhRRl~~DD~rGvge~l~d~------~~gl~ 235 (282)
T 1o7d_D 162 KLNQTEPVAGNYYPVNSRIYITDGNMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDARGVGEPLNKE------GSGLW 235 (282)
T ss_dssp CCCCSCTTGGGCEEESSEEEEECSSEEEEEEESSCEEECCSSTTEEEEEEEEECSSCCSSSCCSCSCCC------GGGGS
T ss_pred ccccccCcccceeeeeeEEEEEcCCeEEEEEecccccccccCCCeEEEEEeeecccccccccccccccc------CCCeE
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 36899
Q ss_pred EEeEEEEEeccCCCcccccccchhhhccCceEEeeccC
Q 011547 316 IQGKFYLRIDHLGEGANWRRSVGQEIYSPLLLAFTEQD 353 (483)
Q Consensus 316 v~~~~~l~l~~~~~~~~~~r~~~~~~~~p~~~~~~~~~ 353 (483)
++++|||+|++....+..+|.+++++.+|++++|+..+
T Consensus 236 v~g~~~l~l~~~~~~~~~~r~~~~~~~~p~~~~fs~~~ 273 (282)
T 1o7d_D 236 VRGRHLVLLDKKETAAARHRLQAEMEVLAPQVVLAQGG 273 (282)
T ss_dssp EEEEEEEEEEEHHHHHHHHHHHHHHHHSCCEEEEEEC-
T ss_pred EEEEEEEEEeCcccchhhhhHHHHhhhCchhhheecCC
Confidence 99999999998877777788889999999999997653
No 3
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A*
Probab=100.00 E-value=1.2e-32 Score=311.71 Aligned_cols=325 Identities=17% Similarity=0.227 Sum_probs=220.2
Q ss_pred eEEEEeCCCceeeeeEEEEEec-------------------------CCcEEEECCCCCeEE-EEEEecchhh-hhhhcc
Q 011547 21 RFSLFDDLFRITCGFLKLLQVS-------------------------SEKVIVKDSGGRTVE-SQLLPLSNAT-LRIRNR 73 (483)
Q Consensus 21 ~vvvfN~L~~~r~~~~V~v~V~-------------------------~~~~~V~D~~G~~V~-~QI~p~~~~~-~~~~~~ 73 (483)
+++|||||+|+|+++ |+|+|. .+.+.|+|++|++|+ +|+++.+... ..+..+
T Consensus 425 ~vvvfN~l~~~r~~v-V~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~G~~v~~~qi~~~~~~~~~~~~~~ 503 (923)
T 2wyh_A 425 PFVLFNTSGHSKTSV-AELSLTWKKYHFGQRFPKEVYQEAQEYLARLSQSFQIIDTSGQVRPEAEILGTSIAFDYDLPKR 503 (923)
T ss_dssp EEEEEECSSSCEEEE-EEEEEEEEEEECTTSCHHHHHHHHHHHHHTCCSEEEEECTTCCBCTTCEEEEEEEEEEEECCSS
T ss_pred EEEEEcCCCceEeEE-EEEEEEcccccccccccccccchhhhhhcccCCCEEEECCCCCEeccEEEEecccccccccccc
Confidence 699999999999999 999886 368999999999999 9999987210 000000
Q ss_pred ceecccCCCCCCCceEEEEEEEecCCCeEEEEEEEecCCCCCCcceeeeeeccCC-CCCceEEccceEEEEEeCCCCeEE
Q 011547 74 YVKAYLGKAPSETLKYWLAFSASVPPLGFSTYTVSIAKPTGPSSTISMVYTSEDS-TSNSIEVGQGNLRLLYSADEGKLT 152 (483)
Q Consensus 74 ~~~~~~g~~~~~~~~~eL~F~a~vPpLG~~tY~V~~~~~~~~~~~~s~~~~~~~~-~~~~~~IeN~~l~v~fd~~tG~L~ 152 (483)
. .+.+....+++|.|.|+||||||++|.|..+....... . . .. ..+..+|||++|+|+||+ +|.|
T Consensus 504 ~-----~~~~~~~~~~~l~f~a~vP~lG~~~~~i~~~~~~~~~~-~-~-----~~~~~~~~~leN~~~~v~~d~-~G~l- 569 (923)
T 2wyh_A 504 S-----FREPYFAIKVRLRLPITLPAMSWKTLALKLGNETTPSE-T-V-----SLYDDSNQCLENGFLKVMIQT-DGRL- 569 (923)
T ss_dssp S-----CCEEEEEEEEEEEEEEEECTTEEEEEEEEEEC-------C-C-----CSEETTTTEEECSSEEEEECT-TSCE-
T ss_pred c-----cccccceeeEEEEEEEEcCCcceEEEEEEECCCccccc-c-c-----ccccCCCceEecCeEEEEEeC-CCCE-
Confidence 0 00000113469999999999999999998765322100 0 0 00 124578999999999997 5998
Q ss_pred EEEeccCcceeeEEEEEEEEecCCCCCCCCCCCCcEEEccCCC-eeee-cCCCeEEEEEE-cCceEEEEEEee-------
Q 011547 153 HYVNNRNKVTASAGQSYSYYSGNDGTDKDPQASGAYVFRPNDT-FSIN-SESQVQLTIVR-GPLLDEVHQQLS------- 222 (483)
Q Consensus 153 si~~k~~g~~~~~~~~f~~Y~~~~G~~~~~~~sGAYiF~P~~~-~~~~-~~~~~~i~v~~-G~l~~ev~~~~~------- 222 (483)
+|.||.+|+++. +|.+|++. |+ .||||+|+|++. .++. ....+.+++++ ||++++|++.+.
T Consensus 570 si~dk~~gr~~~---~~~~y~d~-~d-----~~day~f~p~~~~~~~~~~~~~~~i~v~~~gpl~~~v~~~~~~~vP~~~ 640 (923)
T 2wyh_A 570 TITDKQSGLIYQ---DLLRFEDC-GD-----IGNEYISRQPNHDQPFYADQGTIKLNIISNTAQVAELEIQQTFAIPISA 640 (923)
T ss_dssp EEEETTTCCEEE---EESEEEEE-EC-----CSCSSCCCCCTTCCCEEGGGSEEEEEEEEECSSEEEEEEEEEEEEESSB
T ss_pred EEEECCCCeEEE---EEEEEeec-CC-----CCCeeEEEcCCCCceeeccCCCceEEEEEcCCCEEEEEEEEEecCCccc
Confidence 799999999873 89999873 43 599999999865 4443 23356888887 999999998761
Q ss_pred ----------------------c-----eEEE-ee--------------c-----------cccc-----------ccc-
Q 011547 223 ----------------------P-----WISQ-IR--------------D-----------FRTD-----------WDL- 237 (483)
Q Consensus 223 ----------------------~-----~i~~-~r--------------~-----------~r~~-----------~~~- 237 (483)
+ |+.| ++ + |-++ |+.
T Consensus 641 ~~~L~~~~~~~~~~~~r~~~~s~~~~~~~i~q~i~L~~~~~~ie~~~~vd~~~~~~~l~v~fpt~i~s~~~~~d~~fg~i 720 (923)
T 2wyh_A 641 DKLLQAEMEAVIDITERQARRSQEKAELTLTTLIRMEKNNPRLQFTTRFDNQMTNHRLRVLFPTHLKTDHHLADSIFETV 720 (923)
T ss_dssp CTHHHHHHHTTCCGGGCCCCBCSCEEEEEEEEEEEEETTCSCEEEEEEEEECCCSEEEEEEEECCCCCSEEEEEETTEEE
T ss_pred hhhhccccccccchhhhhhcccccccceEEEEEEEEeCCCceEEEEEEECCccCCEEEEEEeccccCCCCEEEecCceEE
Confidence 2 5665 00 0 0000 000
Q ss_pred ------cc-ccccccceEeecceEEEEeCceeEEEEeecccccccc-cCceEEEEEEEee--eccCccCcccccccceec
Q 011547 238 ------QV-NQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSL-VDGQIELMLHRRL--LHDDVRGVGEVLNETVCV 307 (483)
Q Consensus 238 ------~~-~~pv~~NyYPv~s~~~i~D~~~rltvltdrs~G~sSl-~~G~lE~MlhRRl--~~DD~rGvge~l~e~~~~ 307 (483)
+. .-..++||||+.+.++|+|.+.+++|+||+++|++++ .+|+|||||||+. +.| +|+ +|..+..+
T Consensus 721 ~R~~~~~~~~w~~a~~~~p~~~~v~l~d~~~gvavlnd~~~g~~~~~~~~~i~LtLlRs~~~lg~--~G~-~p~p~a~~- 796 (923)
T 2wyh_A 721 KRPNHPDATFWKNPSNPQHQECFVSLFDGENGVTIGNYGLNEYEILPDTNTIAITLLRSVGEMGD--WGY-FPTPEAQC- 796 (923)
T ss_dssp EEESSCCTTTCCCSCCCEECSSEEEEECSSEEEEEEESSCCEEEEETTTTEEEEEEEEECSBCCT--TSC-CBCGGGGC-
T ss_pred EccCCCCCCCcccccceEeeeeEEEEECCCCcEEEEeCCccceEEecCCCeEEEEEecccccccc--CCc-ccCchhHh-
Confidence 01 1124899999999999999999999999999999998 4899999999998 555 777 67666542
Q ss_pred cccccCeEEEeEEEEEec--cCCC-cccccccchhhhccCceEEeeccCCCcccccccccccCCCcCCCCCCceEEEEee
Q 011547 308 QNECEGLTIQGKFYLRID--HLGE-GANWRRSVGQEIYSPLLLAFTEQDGDNWMNSHVSTFSGIDSFYNLPSNIAIITLQ 384 (483)
Q Consensus 308 ~~~~~gl~v~~~~~l~l~--~~~~-~~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~s~l~~~~~lP~~vhlltl~ 384 (483)
+|+|.+.+. .... -....++.+.++..|++.+...... ......++.+. --|.+|+|.+|+
T Consensus 797 ---------~G~h~f~yal~~~~g~~~~~~~~~a~~~~~Pl~~~~~~~~~----~~~~~~~s~l~---~~~~~v~l~alK 860 (923)
T 2wyh_A 797 ---------LGKHSLSYSFESITKQTQFASYWRAQEGQVPVITTQTNQHE----GTLAAEYSYLT---GTNDQVALTAFK 860 (923)
T ss_dssp ---------CEEEEEEEEEEEEETTTHHHHHHHHHHTTSCCEEEECCSCC----CSBCSEEESCB---CCCTTEEEEEEE
T ss_pred ---------ceEEEEEEEEcccCCchhHHHHHHHHHHhCCHhheecCccc----CcCCcccccee---cCCCCEEEEEEE
Confidence 134433332 2111 0112245677889998876543211 11122334442 126799999999
Q ss_pred eCCCC
Q 011547 385 TGEDK 389 (483)
Q Consensus 385 ~~~d~ 389 (483)
+.+|.
T Consensus 861 ~aed~ 865 (923)
T 2wyh_A 861 RRLAD 865 (923)
T ss_dssp ECTTT
T ss_pred EccCC
Confidence 97663
No 4
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=99.95 E-value=1.3e-25 Score=252.96 Aligned_cols=331 Identities=15% Similarity=0.178 Sum_probs=211.9
Q ss_pred cceEEEEeCCCceeeeeEEEEEecC----------------------CcEEEECCCCCeEEEEEEecchhh-hhhhccce
Q 011547 19 VARFSLFDDLFRITCGFLKLLQVSS----------------------EKVIVKDSGGRTVESQLLPLSNAT-LRIRNRYV 75 (483)
Q Consensus 19 ~~~vvvfN~L~~~r~~~~V~v~V~~----------------------~~~~V~D~~G~~V~~QI~p~~~~~-~~~~~~~~ 75 (483)
+.+++|||||+|+|+++ |+|+|.. +.+.|.|++|++|++|+++.+... ..++.+..
T Consensus 403 ~~~v~vfN~l~~~r~~~-V~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~G~~v~~qv~~~~~~~~~~l~~~~~ 481 (899)
T 3lvt_A 403 AHPFVLFNTSGYQKTEV-VTVEVEIERLPFYTGKPEDLYHELKQKATPDYQVIDPTGKAVASRIVKEDVRFGYDLPKDAF 481 (899)
T ss_dssp CEEEEEEECSSSCEEEE-EEEEEEEEEEEGGGSCHHHHHHHHHHSCCCCEEEECSSSCEECCEEEEEEEEEEECCC----
T ss_pred CCEEEEEeCCCceeeeE-EEEEEEccccccccccchhhhhhhccccCCceEEECCCCCEEeEEEeecccccccccccccc
Confidence 45899999999999999 9998865 689999999999999999986532 11221110
Q ss_pred ecccCCCCCCCceEEEEEEE-ecCCCeEEEEEEEecCCCCCCcceeeeeeccCCCCCceEEccceEEEEEeCCCCeEEEE
Q 011547 76 KAYLGKAPSETLKYWLAFSA-SVPPLGFSTYTVSIAKPTGPSSTISMVYTSEDSTSNSIEVGQGNLRLLYSADEGKLTHY 154 (483)
Q Consensus 76 ~~~~g~~~~~~~~~eL~F~a-~vPpLG~~tY~V~~~~~~~~~~~~s~~~~~~~~~~~~~~IeN~~l~v~fd~~tG~L~si 154 (483)
+.+.....++|.|.| +||||||++|.|.++....... .. ....+...|||++|+|+||+ +|.| +|
T Consensus 482 -----~~~~~~~~~~l~f~a~~vPalGy~~~~i~~~~~~~~~~---~~----~~~~~~~~leN~~~~v~~d~-~G~l-sl 547 (899)
T 3lvt_A 482 -----RQPYMAKYLTVELSVKEMAPFSWDSFALIQGETKAFEG---SL----LAQPATNEMENEFIQVKIEN-NGSL-TI 547 (899)
T ss_dssp ------CEEEEEEEEEEEEEEEECTTEEEEEEEEESCCCCCCS---CC----SEETTTTEEECSSEEEEECT-TSCE-EE
T ss_pred -----ccccccceEEEEEEecCCCCCCCEEEEEEecCcccccc---cc----cccccCcEEecCcEEEEEcC-CCcE-EE
Confidence 011112356899988 8999999999998765432200 00 00113578999999999997 8999 79
Q ss_pred EeccCcceeeEEEEEEEEecCCCCCCCCCCCCcEEEccCCC-eeeecCC-CeEEEEE-EcCceEEEEEEee---------
Q 011547 155 VNNRNKVTASAGQSYSYYSGNDGTDKDPQASGAYVFRPNDT-FSINSES-QVQLTIV-RGPLLDEVHQQLS--------- 222 (483)
Q Consensus 155 ~~k~~g~~~~~~~~f~~Y~~~~G~~~~~~~sGAYiF~P~~~-~~~~~~~-~~~i~v~-~G~l~~ev~~~~~--------- 222 (483)
.||.+|+++ .++.+|++ .|| .||+|+|+|+.. .++.... .+.++++ .||++++|++...
T Consensus 548 ~Dk~~gre~---~~~~~~~d-~gd-----~g~~Y~~~p~~~d~~~~~~~~~~~v~v~e~gpl~~~v~v~~~~~~P~~~~~ 618 (899)
T 3lvt_A 548 ADKKTGETF---SKLLTFED-TGD-----IGNEYIFFKPTEDQGITTENVTAEITNKENSPVKASYQIKQTVMLPVAADE 618 (899)
T ss_dssp EETTTCCEE---EEETEEEE-EEC-----CSBTTBCCCCTTCCCEESTTCCCEEEEEEECSSEEEEEEEEEEEEESSBCT
T ss_pred EECCCCeEE---EEEEEEec-CCC-----CCCceeecCCcCCceeeccCCCceEEEEEcCCCEEEEEEEEEEccccchhh
Confidence 999999987 46888876 454 489999999754 5665433 3678876 6999999986532
Q ss_pred -------------------c------eEEE-e-------------------eccc------cc-----------ccc---
Q 011547 223 -------------------P------WISQ-I-------------------RDFR------TD-----------WDL--- 237 (483)
Q Consensus 223 -------------------~------~i~~-~-------------------r~~r------~~-----------~~~--- 237 (483)
. ++.| + +++| ++ |+.
T Consensus 619 ~~~~~~~~~~~~~~r~~~~S~~~~~~~i~q~i~L~~~~~~id~~~~Vdw~~~~~~Lrv~Fp~~i~s~~~~~d~~fG~i~R 698 (899)
T 3lvt_A 619 RLEEEQKAVREFRERLAQRSTTLRPFEITTMVTMIKESNQLFFETTINNQIKDHRLRVLFPTGMVTETHEADSIYEVVTR 698 (899)
T ss_dssp HHHHHHHTTCCGGGCCCCBCSCEEEEEEEEEEEEETTCCCEEEEEEEEECCCSEEEEEEECCSCCCSEEEEECSSSEEEE
T ss_pred hhcccccccccchhhhhcccccccceEEEEEEEEeCCCCEEEEEEEECCCcCCEEEEEECCCCCCcCceEEeccceEEEC
Confidence 1 5554 0 0000 00 000
Q ss_pred ----ccccccccceEeecceEEEEeCceeEEEEeecccccccccCceEEEEEEEeeeccCccCcccccccceeccccccC
Q 011547 238 ----QVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLVDGQIELMLHRRLLHDDVRGVGEVLNETVCVQNECEG 313 (483)
Q Consensus 238 ----~~~~pv~~NyYPv~s~~~i~D~~~rltvltdrs~G~sSl~~G~lE~MlhRRl~~DD~rGvge~l~e~~~~~~~~~g 313 (483)
+..=-.++|+||+.+.+.|.|.+..++|+||..+|..++.+|.|+|||+|+-..--..|+ -|--|. .|.|
T Consensus 699 pt~~~t~We~a~~e~~~~~~vdlsd~~~Gvavlnd~~~gy~v~~d~~i~LTLlRs~g~lG~~g~-~p~Pda-----~~~G 772 (899)
T 3lvt_A 699 PNQVSDTWENPTNPQHQQAFVNVHDQNKGVTIFNEGLNEYEVLADGTIAVTLIRCVGELGDWGY-FATPEA-----QCQG 772 (899)
T ss_dssp EC-------CCCCCEECSSEEEEECSSCEEEEEESSCCEEEECTTCCEEEEEEEECSBCCTTSC-CBCGGG-----GCCE
T ss_pred CCCCCccccCCCcceeeeeEEEEecCCceEEEEeCCCcceeEcCCCEEEEEEecccCcccccCC-cCCcch-----hhhC
Confidence 000015789999999999999999999999999999999889999999999621100121 111111 1222
Q ss_pred eEEEeEEEEEeccCC--CcccccccchhhhccCceEEeeccCCCcccccccccccCCCcCCCCCCceEEEEeeeCCCC
Q 011547 314 LTIQGKFYLRIDHLG--EGANWRRSVGQEIYSPLLLAFTEQDGDNWMNSHVSTFSGIDSFYNLPSNIAIITLQTGEDK 389 (483)
Q Consensus 314 l~v~~~~~l~l~~~~--~~~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~s~l~~~~~lP~~vhlltl~~~~d~ 389 (483)
...|..-|-+.. ......-+.+..+..|+..+...... ......+|.+. --+.++.|-+++..||.
T Consensus 773 ---~h~F~yal~ph~g~~~~~~~~~~a~~~n~pl~~~~~~~~~----~~l~~~~s~~~---~~~~~v~lsavK~aEd~ 840 (899)
T 3lvt_A 773 ---EYTFKYGLSLHGKPEERFATYQQAYSAQIPFTAATTARHE----GKLAPNHVYLT---TAEGPIGWTAVKRQEQT 840 (899)
T ss_dssp ---EEEEEEEEEEESSGGGHHHHHHHHHHHTSCCEEEECCSCC----CSBCSEEESEE---CCCSSEEEEEEEECTTT
T ss_pred ---ceEEEEEEEecCCCchhhHHHHHHHHhcCCcceeeccccc----CcCCCccccee---eCCCCEEEEEEEeeecC
Confidence 233433332211 11111123456788888665321110 01111223222 12558999999997774
No 5
>1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=99.89 E-value=2.8e-23 Score=178.49 Aligned_cols=102 Identities=33% Similarity=0.591 Sum_probs=81.7
Q ss_pred ccccCCCcCCCCCCceEEEEeee----------------CCCC--CCceeeEeeccccCCCCccceEEEeccccccchhh
Q 011547 363 STFSGIDSFYNLPSNIAIITLQT----------------GEDK--DYSVLTSVELKKLFPNKKISKVTEMNLSANQERAT 424 (483)
Q Consensus 363 ~~~s~l~~~~~lP~~vhlltl~~----------------~~d~--~~s~~~~v~l~~lf~~~~i~~i~EtsLt~~~~~~~ 424 (483)
.+|+++.. +||||||||||++ |+|+ .++++++|||++||..++|.+++||+|+|||++++
T Consensus 3 ~~~s~l~~--~LP~nvhLlTLe~~~~~~iLlRl~hl~e~~ed~~~~~s~pv~v~l~~lF~~~~i~~i~EttLtgn~~~~~ 80 (126)
T 1o7d_E 3 TQFSGLRR--ELPPSVRLLTLARWGPETLLLRLEHQFAVGEDSGRNLSSPVTLDLTNLFSAFTITNLRETTLAANQLLAY 80 (126)
T ss_dssp CEECSBSS--CCCTTCEEEEEEEEETTEEEEEEECCCCTTTTTTTTCSSCEEEECSSSBSSSEEEEEEEECTTSSSBGGG
T ss_pred cccCcccc--cCCCcEeEEEEEEcCCCcEEEEEEeecccccCcccccCcceEEeHHHhhcccccceEEEEcccccccccc
Confidence 35788765 8999999999998 7888 88999999999999999999999999999999999
Q ss_pred hhccceeeeecCCccccceeccCCCCCCCCceEEecCceeEEEEEEEee
Q 011547 425 MEKKRLAWKVEGSAEEETKVVRGGPVDPATLVVELAPMEIRTFFIDFDR 473 (483)
Q Consensus 425 ~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~L~PmeIrTf~i~~~~ 473 (483)
+ +||+|++++.... .+ .+.+.+.+.|+|.|||||||+|+++.
T Consensus 81 ~--~Rl~w~~~~~~~~----~~-~~~~~~~~~vtL~PmEIRTFii~~~~ 122 (126)
T 1o7d_E 81 A--SRLQWTTDTGPTP----HP-SPSRPVSATITLQPMEIRTFLASVQW 122 (126)
T ss_dssp C--CCCCCCBC-------------------CEEEECTTCEEEEEEEEEC
T ss_pred c--cccccccCCCCcc----cc-cccCCCCceEEEcCccEEEEEEEEEe
Confidence 7 9999998763211 11 33445567999999999999999985
No 6
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6
Probab=99.54 E-value=2.4e-14 Score=128.81 Aligned_cols=73 Identities=33% Similarity=0.408 Sum_probs=65.1
Q ss_pred cceEEEEeCCCceeeeeEEEEEecCCcEEEECCCCCeEEEEEEecchhhhhhhccceecccCCCCCCCceEEEEEEEecC
Q 011547 19 VARFSLFDDLFRITCGFLKLLQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVP 98 (483)
Q Consensus 19 ~~~vvvfN~L~~~r~~~~V~v~V~~~~~~V~D~~G~~V~~QI~p~~~~~~~~~~~~~~~~~g~~~~~~~~~eL~F~a~vP 98 (483)
+..++|||||+|.|+++ |+|+|..+.+.|+|++|++|++|++|++.. ..++|.|.++||
T Consensus 79 ~~~vvvfN~l~~~r~~~-V~v~v~~~~~~v~d~~G~~v~~qi~~~~~~--------------------~~~~l~f~a~vP 137 (159)
T 1o7d_C 79 RFQVIVYNPLGRKVDWM-VRLPVSKHVYLVKDPGGKIVPSDVVTIPSS--------------------DSQELLFSALVP 137 (159)
T ss_dssp EEEEEEEECSSSCEEEE-EEEEECSSCEEEECSSSCEECCEEEEETTT--------------------TEEEEEEEEEEC
T ss_pred cEEEEEECCCCceEeEE-EEEEEcCCcEEEEcCCCCEeeeEEEeccCC--------------------CceEEEEEeecC
Confidence 34799999999999999 999999999999999999999999998752 235899999999
Q ss_pred CCeEEEEEEEecCC
Q 011547 99 PLGFSTYTVSIAKP 112 (483)
Q Consensus 99 pLG~~tY~V~~~~~ 112 (483)
||||++|+|..+.+
T Consensus 138 ~lG~~ty~i~~~~~ 151 (159)
T 1o7d_C 138 AVGFSIYSVSQMPN 151 (159)
T ss_dssp TTEEEEEEEEECC-
T ss_pred CceeEEEEEEECCC
Confidence 99999999987654
No 7
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=11.38 E-value=1.5e+02 Score=23.78 Aligned_cols=21 Identities=29% Similarity=0.347 Sum_probs=17.9
Q ss_pred cEEEECCCCCeEEEEEEecch
Q 011547 45 KVIVKDSGGRTVESQLLPLSN 65 (483)
Q Consensus 45 ~~~V~D~~G~~V~~QI~p~~~ 65 (483)
.+.|.+++|+.++++|.+..+
T Consensus 48 ~v~v~~PsG~~~~~~v~~~~~ 68 (116)
T 2dmc_A 48 TASIKAPSGRDEPCLLKRLPN 68 (116)
T ss_dssp CCEEECTTSCBCCEEEEEETT
T ss_pred EEEEECCCCCEEeeEEEeCCC
Confidence 678999999999999988643
No 8
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=10.90 E-value=2.2e+02 Score=22.25 Aligned_cols=21 Identities=24% Similarity=0.583 Sum_probs=17.4
Q ss_pred cEEEECCCCCeEEEEEEecch
Q 011547 45 KVIVKDSGGRTVESQLLPLSN 65 (483)
Q Consensus 45 ~~~V~D~~G~~V~~QI~p~~~ 65 (483)
.+.|.+++|..++++|....+
T Consensus 34 ~v~v~~P~G~~~~~~v~d~~d 54 (102)
T 2dlg_A 34 SAHVTSPSGRVTEAEIVPMGK 54 (102)
T ss_dssp EEEEECTTSCEEECEEEECSS
T ss_pred EEEEECCCCCEeeeEEEECCC
Confidence 577889999999999988643
No 9
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=10.13 E-value=1e+02 Score=23.44 Aligned_cols=16 Identities=31% Similarity=0.611 Sum_probs=12.4
Q ss_pred cEEEECCCCCeEE-EEE
Q 011547 45 KVIVKDSGGRTVE-SQL 60 (483)
Q Consensus 45 ~~~V~D~~G~~V~-~QI 60 (483)
.++|.|.+|+||+ +.|
T Consensus 4 ~v~V~d~~GkPV~gA~V 20 (82)
T 3e8v_A 4 SVLVTDAEGQPVADATV 20 (82)
T ss_dssp EEEEECTTSCBCTTCEE
T ss_pred EEEEEcCCCCCCCCCEE
Confidence 4689999999987 344
No 10
>1iwm_A Outer membrane lipoprotein LOLB; unclosed beta barrel, protein transport; 1.90A {Escherichia coli} SCOP: b.125.1.2 PDB: 1iwn_A*
Probab=9.78 E-value=4.5e+02 Score=22.83 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=27.4
Q ss_pred cceEEEEeCCCceeeeeEEEEEecCCcEEEECCCCCeE
Q 011547 19 VARFSLFDDLFRITCGFLKLLQVSSEKVIVKDSGGRTV 56 (483)
Q Consensus 19 ~~~vvvfN~L~~~r~~~~V~v~V~~~~~~V~D~~G~~V 56 (483)
.-.|.|+|||+... ++|..+...+++.|.+|+..
T Consensus 59 ~~~L~L~~PLG~t~----~~l~~~~~~~~L~~~~g~~~ 92 (186)
T 1iwm_A 59 RYRLLLTNPLGSTE----LELNAQPGNVQLVDNKGQRY 92 (186)
T ss_dssp EEEEEEECTTSCEE----EEEEEETTEEEEECTTSCEE
T ss_pred ceEEEEECCcCccE----EEEEEcCCEEEEEECCCCEE
Confidence 34799999999876 67777777899999999874
Done!