Query 011549
Match_columns 483
No_of_seqs 196 out of 1104
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 02:36:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011549.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011549hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0566 Inositol-1,4,5-triphos 100.0 6.2E-92 1.3E-96 764.0 22.3 338 16-442 506-849 (1080)
2 PLN03191 Type I inositol-1,4,5 100.0 2.9E-90 6.4E-95 736.0 32.2 371 56-435 101-602 (621)
3 smart00128 IPPc Inositol polyp 100.0 3.6E-78 7.8E-83 613.8 28.3 295 62-429 2-309 (310)
4 COG5411 Phosphatidylinositol 5 100.0 1.9E-70 4E-75 562.3 18.2 333 19-439 2-341 (460)
5 PTZ00312 inositol-1,4,5-tripho 100.0 2.7E-30 5.8E-35 254.9 9.9 178 232-422 64-356 (356)
6 KOG0565 Inositol polyphosphate 99.9 2E-25 4.2E-30 203.3 12.4 142 189-336 2-145 (145)
7 KOG1976 Inositol polyphosphate 99.7 7.7E-19 1.7E-23 174.2 5.3 166 233-424 154-388 (391)
8 TIGR03395 sphingomy sphingomye 98.9 3.6E-08 7.8E-13 99.8 17.1 147 232-421 117-282 (283)
9 PF03372 Exo_endo_phos: Endonu 98.9 5.5E-10 1.2E-14 104.7 3.7 59 199-261 72-133 (249)
10 PRK05421 hypothetical protein; 98.9 3.9E-08 8.5E-13 98.1 17.1 58 235-310 134-192 (263)
11 PRK11756 exonuclease III; Prov 98.8 8.1E-08 1.8E-12 95.4 12.8 27 235-261 88-114 (268)
12 TIGR00633 xth exodeoxyribonucl 98.7 2.7E-07 5.8E-12 90.0 13.1 35 66-106 2-37 (255)
13 PRK13911 exodeoxyribonuclease 98.5 2E-06 4.2E-11 85.7 14.2 35 66-105 2-36 (250)
14 COG3568 ElsH Metal-dependent h 98.4 2.7E-06 5.8E-11 85.0 13.2 71 216-310 101-174 (259)
15 PTZ00297 pantothenate kinase; 98.3 3.3E-05 7.2E-10 93.2 20.8 69 233-310 130-205 (1452)
16 TIGR00195 exoDNase_III exodeox 98.3 8.2E-06 1.8E-10 80.4 12.2 34 66-105 2-35 (254)
17 PLN03144 Carbon catabolite rep 98.2 2.8E-05 6E-10 86.2 16.0 64 248-329 417-481 (606)
18 PRK15251 cytolethal distending 98.1 9E-05 1.9E-09 74.7 15.9 46 65-112 25-72 (271)
19 smart00476 DNaseIc deoxyribonu 98.1 0.00012 2.6E-09 74.1 16.4 23 238-260 129-154 (276)
20 COG0708 XthA Exonuclease III [ 97.9 5.8E-05 1.3E-09 75.6 9.9 34 66-105 2-35 (261)
21 KOG2756 Predicted Mg2+-depende 96.9 0.008 1.7E-07 60.4 11.1 62 239-313 195-256 (349)
22 KOG2338 Transcriptional effect 95.4 0.084 1.8E-06 57.1 9.7 84 225-324 226-313 (495)
23 KOG3873 Sphingomyelinase famil 94.8 0.064 1.4E-06 56.1 6.4 101 195-312 75-182 (422)
24 COG3021 Uncharacterized protei 94.7 0.15 3.2E-06 52.6 8.9 64 234-319 173-238 (309)
25 PF14529 Exo_endo_phos_2: Endo 93.8 0.085 1.8E-06 45.0 4.3 33 387-419 86-119 (119)
26 KOG3870 Uncharacterized conser 38.7 12 0.00027 40.0 0.6 18 297-314 349-366 (434)
27 COG0217 Uncharacterized conser 27.9 66 0.0014 32.3 3.6 65 187-256 79-145 (241)
No 1
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.2e-92 Score=764.02 Aligned_cols=338 Identities=39% Similarity=0.677 Sum_probs=307.6
Q ss_pred eccCccccCCCCchhhcccCCCCCCCChhhHHHhhhcccCccccccceEEEEEEeeCCCCCCCCCchhchhhhcCCC--C
Q 011549 16 FKRKPKKADPYHINEISDAGEDDGDDSMDDVEEVVSAEMDPCISTNKLRIFVGTWNVAGRSPVGSLAVDLDEWLNLK--D 93 (483)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~I~v~TWNV~g~~P~~~l~~dL~~wL~~~--~ 93 (483)
+.+.+-+|||.|.+ |.. . |++++. .++..++|+||||||||||+.+.-. .+|.+||.+. .
T Consensus 506 ~q~~v~L~dpv~~y-v~~--------~------L~er~~-eyt~~k~i~IfvgTfNvNG~s~~~k--~~L~~WLfp~s~~ 567 (1080)
T KOG0566|consen 506 AQSAVILYDPVHEY-VLK--------E------LRERRS-EYTEPKDISIFVGTFNVNGRSAAFK--DDLSDWLFPISRG 567 (1080)
T ss_pred ccchhhhcCchhHH-HHH--------H------HHHhhh-hhccccceEEEEEeeeccCccccch--hhHHhhccccccC
Confidence 44788899999988 544 3 333332 4579999999999999999655433 3789999876 2
Q ss_pred ----CCcEEEEEEEeeecCccccccCCCCchhhhHHHHHHHHHhcccCCCCCCCCCCCCCcCccccchhhhhhhhccccc
Q 011549 94 ----AADMYVLGFQEIVPLKARTVIGAEDPTEATNWNLLIGKTLNNKYGCPWLSPKFSQNISSDSYLLDTEMESSLSSRA 169 (483)
Q Consensus 94 ----~~DIyVIGlQEiv~l~~~~~~g~~d~~~~~~W~~~i~~~Ln~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 169 (483)
++|||||||||+|+|++++++.+ +++....|+..|+++||+
T Consensus 568 ~~~~~aDIyviG~eEvVeLnag~iv~A-s~tk~~~Wee~i~~~Ln~---------------------------------- 612 (1080)
T KOG0566|consen 568 KEFSPADIYVIGFEEVVELNAGNIVSA-STTKRRFWEEKILKTLNR---------------------------------- 612 (1080)
T ss_pred CcCCcCcEEEEeehhhhhcCccceecc-ChHHHHHHHHHHHHHhcC----------------------------------
Confidence 69999999999999999999865 678899999999999985
Q ss_pred CCCccchhhhccccccCCCCEEEEEEeeeeeEEEEEEEecCcccccccccceeeeeeeccccccCCceEEEEEEEEcCeE
Q 011549 170 KTPKKEWWRTQSEKLYWGSKYKLMASKKMVGVLISVWIRRELLRKYCISNVKVCSVACGIMGYLGNKGSVSVSMSIEGTS 249 (483)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~Y~~V~s~qlvGi~l~Vfvr~~l~~~~~I~~V~~~~v~tG~~g~~GNKGaV~ir~~i~~t~ 249 (483)
.+.+|+++.|.||+|++|++|+|.++.+ +|++|..++++||+||+.||||||||||.+++|+
T Consensus 613 ----------------~~~kYvlL~s~QlvGv~L~iF~r~~~~p--~Ik~V~~~tkKTGfGG~tgNKGAVAIrf~~~~Ts 674 (1080)
T KOG0566|consen 613 ----------------YKNKYVLLRSEQLVGVCLLLFIRPDHAP--YIKDVAGDTKKTGFGGATGNKGAVAIRFVYHATS 674 (1080)
T ss_pred ----------------CCCceEEEehhhhheeeEEEEEcccccc--hhhhcccceeecccccccCCCceEEEEEEecccc
Confidence 1568999999999999999999999999 9999999999999999999999999999999999
Q ss_pred EEEEEeccCCCCCCchhhHhhHHHHHHHHhCCCCCCCCCCCCCCCCccccccceEEecccccccccChHHHHHHHHhcCh
Q 011549 250 FCFVAAHLASGEKKGDEGRRNHQVSEIFKRTSFPRSPNDDDNPHPLTILGHDQIFWFGDLNYRLYLEDNLARHLIKKQDW 329 (483)
Q Consensus 250 ~~FVn~HLaA~~~~~~~~rRn~d~~~I~~~~~F~~~~~~~~~~~~~~i~~~d~vfw~GDLNYRI~~~~~~v~~li~~~~~ 329 (483)
|||||+|||||++++ +.||.||.+|.+++.||++ ..|.+||+|||||||||||+++++||+++|.+++|
T Consensus 675 fCFv~SHlAAG~snv--~ERn~DY~tI~r~l~Fp~G---------r~I~~HD~ifW~GDFNYRI~l~nEEVr~~v~~~d~ 743 (1080)
T KOG0566|consen 675 FCFVCSHLAAGQSNV--EERNEDYKTIARKLRFPRG---------RMIFSHDYIFWLGDFNYRIDLSNEEVRRLVRNQDL 743 (1080)
T ss_pred EEEEecccccccchH--hhhhhhHHHHHHhccccCC---------ccccCCceEEEecccceeecCCHHHHHHHHHhccH
Confidence 999999999999886 4699999999999999876 46889999999999999999999999999999999
Q ss_pred hhhhhcccchHHHHcCCCccCcccCCccCCCCcccCCCCCCCCCCCCCCCCCCCCCCcccccceeeeccCeeEEeeccCC
Q 011549 330 RGLQEFDQLRREQEEGGVFQGWREGNIEFPPTYKYSSSNCNRYSGGGPNRSGEKPRTPAWCDRILWYGKGVKQLSYFRSE 409 (483)
Q Consensus 330 ~~Ll~~DQL~~e~~~g~~F~~f~E~~I~F~PTYKy~~gt~~~Yd~~~~~dts~k~R~PSWcDRIL~~~~~i~~l~Y~s~~ 409 (483)
+.|+++|||++||.+|.+|.||.|++|+|+||||||.|| ++|| ||+|+|+|||||||||++.....++|.+++
T Consensus 744 ~kL~e~DQL~~q~~~G~vF~gF~E~~ltF~PTYKyD~gT-d~YD------TSeK~R~PAWTDRIL~r~e~~~~l~Y~~~e 816 (1080)
T KOG0566|consen 744 DKLLEYDQLTQQMNAGQVFPGFHEGQLTFPPTYKYDPGT-DDYD------TSEKCRTPAWTDRILWRGEKLELLSYKRAE 816 (1080)
T ss_pred HHHhhHHHHHHHHhcCcccccccccccccCCcccccCCC-Cccc------cchhccCccchhhheecccccccccccccc
Confidence 999999999999999999999999999999999999999 9995 999999999999999999999999999999
Q ss_pred CCCCCcccccceEEEEEEEecCCcccccccccc
Q 011549 410 SRFSDHRPVSALFSTQVEVTRSNPKAVAMQSIL 442 (483)
Q Consensus 410 ~~~SDHkPV~a~F~v~v~~~~~~~~~~~l~~~~ 442 (483)
+++||||||+|.|.++|..++.++|.....++.
T Consensus 817 l~~SDHRPV~A~~~a~i~~Vd~~kk~~l~eev~ 849 (1080)
T KOG0566|consen 817 LKTSDHRPVYAIFRAEIFEVDEQKKLRLFEEVK 849 (1080)
T ss_pred ccccCCCceEEEEEEEEEEEcHHHHHHHHHHHH
Confidence 999999999999999999999988887665443
No 2
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional
Probab=100.00 E-value=2.9e-90 Score=735.95 Aligned_cols=371 Identities=47% Similarity=0.828 Sum_probs=304.8
Q ss_pred ccccccceEEEEEEeeCCCCCCCCCchhchhhhcCCCCCCcEEEEEEEeeecCccccccCCCCchhhhHHHHHHHHHhcc
Q 011549 56 PCISTNKLRIFVGTWNVAGRSPVGSLAVDLDEWLNLKDAADMYVLGFQEIVPLKARTVIGAEDPTEATNWNLLIGKTLNN 135 (483)
Q Consensus 56 ~~~~~~~l~I~v~TWNV~g~~P~~~l~~dL~~wL~~~~~~DIyVIGlQEiv~l~~~~~~g~~d~~~~~~W~~~i~~~Ln~ 135 (483)
.|+..++++||||||||||+.|+.++ +|..||...+++|||||||||+|+|++++|+|+++...+.+|+..|.++||+
T Consensus 101 ~y~~~~~~rv~v~TWNV~g~~p~~~l--~l~~wl~~~~p~DiyviG~QE~v~lna~nv~~~~~~~~~~~W~~~i~~tl~~ 178 (621)
T PLN03191 101 QYINTKDIRVTIGTWNVAGRLPSEDL--EIEDWLSTEEPADIYIIGFQEVVPLNAGNVLGAEDSRPIPKWEAIIRRTLNK 178 (621)
T ss_pred HhccccceEEEEEEeecCCCCCcccC--CHHHhccCCCCCCEEEEeeEEeccCcHhhhhccccCCchhhHHHHHHHHHhc
Confidence 45788999999999999999999988 8999999888999999999999999999999999988999999999999997
Q ss_pred cCCC--CC--CCCCCCCCc-------------------Cccccchh---------hhh----------------------
Q 011549 136 KYGC--PW--LSPKFSQNI-------------------SSDSYLLD---------TEM---------------------- 161 (483)
Q Consensus 136 ~~~~--~~--~~~~~~~~~-------------------~~~~~~~~---------~e~---------------------- 161 (483)
.... .. .++-.+|.+ ....+++. .|.
T Consensus 179 ~~~~~~~~k~~S~ppsp~~~~~~~~~e~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (621)
T PLN03191 179 SNKPESKHKSYSAPPSPVLRTSIVADELAEEVDSLPLEMMNNEFIDAATGCPSLEPERNKNIGWPEHSLDATPQVVSSNS 258 (621)
T ss_pred cCCCCCccccCCCCCCcccCCcchhhhhhhhcccChhhhcccccccccccccccchhhccccCCcccccccCcccccccc
Confidence 4321 00 011112221 00000000 000
Q ss_pred --hhhcccc---cCCC---------------------------cc-chhh------------------------------
Q 011549 162 --ESSLSSR---AKTP---------------------------KK-EWWR------------------------------ 178 (483)
Q Consensus 162 --~~~~~~~---~~~~---------------------------~~-~~~~------------------------------ 178 (483)
+++++.. .+++ +. .-|.
T Consensus 259 ~l~r~~s~~~r~~~~~~e~p~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (621)
T PLN03191 259 KLRRVFSSSARLGFKWPENPSLFSPQRFALNARGLKRSHRSFGNLGLSWNEIKQRSEVPEVPEVIDSLSDVSDRSSEAED 338 (621)
T ss_pred cceeeeccccccccCCCCCccccCchhhcccccccchhhhccccccccccchhhcccccccccccccccccccccCCCcc
Confidence 1111000 0000 00 0021
Q ss_pred -------------hcc-ccccCCCCEEEEEEeeeeeEEEEEEEecCcccccccccceeeeeeeccccccCCceEEEEEEE
Q 011549 179 -------------TQS-EKLYWGSKYKLMASKKMVGVLISVWIRRELLRKYCISNVKVCSVACGIMGYLGNKGSVSVSMS 244 (483)
Q Consensus 179 -------------~~~-~~~~~~~~Y~~V~s~qlvGi~l~Vfvr~~l~~~~~I~~V~~~~v~tG~~g~~GNKGaV~ir~~ 244 (483)
... .......+|++|.|+||+||+|+||||+++.+ +|++|++++|+||++|++||||||+|||.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~YvkV~S~qLvGl~L~VFvk~~l~~--~Is~V~~s~V~tGl~G~~GNKGAVaIr~~ 416 (621)
T PLN03191 339 DTFKEVPSYQLPEDLIKDCRKVKQKYVRIVSKQMVGIYVSVWVRKRLRR--HINNLKVSPVGVGLMGYMGNKGSVSISMS 416 (621)
T ss_pred cccccCChhhhhhHHHHhhccCCCCEEEEEEEeeeeEEEEEEEehhhhh--hcccceeeeEeeccccccccceeEEEEEE
Confidence 000 01123579999999999999999999999999 99999999999999999999999999999
Q ss_pred EcCeEEEEEEeccCCCCCCchhhHhhHHHHHHHHhCCCCCCCCCCCCCCCCccccccceEEecccccccccChHHHHHHH
Q 011549 245 IEGTSFCFVAAHLASGEKKGDEGRRNHQVSEIFKRTSFPRSPNDDDNPHPLTILGHDQIFWFGDLNYRLYLEDNLARHLI 324 (483)
Q Consensus 245 i~~t~~~FVn~HLaA~~~~~~~~rRn~d~~~I~~~~~F~~~~~~~~~~~~~~i~~~d~vfw~GDLNYRI~~~~~~v~~li 324 (483)
+++++|||||||||||+++.+..+||+||.+|++++.|+.... ...+..|.+||+|||||||||||++++++++++|
T Consensus 417 l~~Ts~cFVn~HLAAg~~~~~~~rRN~D~~~I~~~l~F~~~~~---~~~~~~I~dhD~vFWlGDLNYRIdl~~~ev~~lI 493 (621)
T PLN03191 417 LFQSRLCFVCSHLTSGHKDGAEQRRNADVYEIIRRTRFSSVLD---TDQPQTIPSHDQIFWFGDLNYRLNMLDTEVRKLV 493 (621)
T ss_pred EcCcEEEEEEeccccccccchHHHHHHHHHHHHhccccCcccc---cCCCccccccceEEEecCccccccCCHHHHHHHH
Confidence 9999999999999999887777789999999999999975321 1234568899999999999999999999999999
Q ss_pred HhcChhhhhhcccchHHHHcCCCccCcccCCccCCCCcccCCCCCCCCCCCCCCCCCCCCCCcccccceeeeccCeeEEe
Q 011549 325 KKQDWRGLQEFDQLRREQEEGGVFQGWREGNIEFPPTYKYSSSNCNRYSGGGPNRSGEKPRTPAWCDRILWYGKGVKQLS 404 (483)
Q Consensus 325 ~~~~~~~Ll~~DQL~~e~~~g~~F~~f~E~~I~F~PTYKy~~gt~~~Yd~~~~~dts~k~R~PSWcDRIL~~~~~i~~l~ 404 (483)
.+++|..||++|||++++++|.+|.||.|++|+|+|||||++|+ +.|+|.. .+||+|+|+|||||||||++.+++++.
T Consensus 494 ~~~~~~~LL~~DQL~~e~~~g~vF~GF~Eg~I~FpPTYKYd~gS-d~Ydg~~-~~Ts~KkR~PSWCDRILykg~~i~~l~ 571 (621)
T PLN03191 494 AQKRWDELINSDQLIKELRSGHVFDGWKEGPIKFPPTYKYEINS-DRYVGEN-PKEGEKKRSPAWCDRILWLGKGIKQLC 571 (621)
T ss_pred hhccHHHHHHHhHHHHHHHcCCccCCcccCCccCCCCcccccCC-ccccccc-cccccCccccchhheEeecCCCceEeE
Confidence 99999999999999999999999999999999999999999999 9998643 368999999999999999999999999
Q ss_pred eccCCCCCCCcccccceEEEEEEEecCCccc
Q 011549 405 YFRSESRFSDHRPVSALFSTQVEVTRSNPKA 435 (483)
Q Consensus 405 Y~s~~~~~SDHkPV~a~F~v~v~~~~~~~~~ 435 (483)
|.+.++++||||||+|.|.++|++.+..+..
T Consensus 572 Y~s~ei~~SDHRPV~A~F~v~V~~id~~k~q 602 (621)
T PLN03191 572 YKRSEIRLSDHRPVSSMFLVEVEVFDHRKLQ 602 (621)
T ss_pred eccCCcccCCchhcceEEEEEEEecCHHHHH
Confidence 9998899999999999999999999864433
No 3
>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues. Mg(2+)-dependent/Li(+)-sensitive enzymes.
Probab=100.00 E-value=3.6e-78 Score=613.82 Aligned_cols=295 Identities=40% Similarity=0.763 Sum_probs=261.5
Q ss_pred ceEEEEEEeeCCCCC-CCCCchhchhhhcCCC------CCCcEEEEEEEeeecCccccccCCCCchhhhHHHHHHHHHhc
Q 011549 62 KLRIFVGTWNVAGRS-PVGSLAVDLDEWLNLK------DAADMYVLGFQEIVPLKARTVIGAEDPTEATNWNLLIGKTLN 134 (483)
Q Consensus 62 ~l~I~v~TWNV~g~~-P~~~l~~dL~~wL~~~------~~~DIyVIGlQEiv~l~~~~~~g~~d~~~~~~W~~~i~~~Ln 134 (483)
+++|+|+||||||+. |++. +|.+||... ..||||||||||++++.+.+++. .+......|...+...|+
T Consensus 2 ~~~v~v~TwNv~~~~~~p~~---~l~~~l~~~~~~~~~~~pDI~viglQEi~~~~~~~~~~-~~~~~~~~W~~~i~~~l~ 77 (310)
T smart00128 2 DIKVLVGTWNVGGLKADPKV---DVTSWLFQKIDVKQSEKPDIYVIGLQEVVDLENGVLLE-TIAGKERLWSKLIESSLN 77 (310)
T ss_pred ceEEEEEEEECCCccCCChh---hHHHhhccccccccCCCCCEEEEEeeeecccchhhhhh-ccchhHHHHHHHHHHhcC
Confidence 689999999999975 3332 679999752 47999999999999988887764 345678899999887764
Q ss_pred ccCCCCCCCCCCCCCcCccccchhhhhhhhcccccCCCccchhhhccccccCCCCEEEEEEeeeeeEEEEEEEecCcccc
Q 011549 135 NKYGCPWLSPKFSQNISSDSYLLDTEMESSLSSRAKTPKKEWWRTQSEKLYWGSKYKLMASKKMVGVLISVWIRRELLRK 214 (483)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~V~s~qlvGi~l~Vfvr~~l~~~ 214 (483)
. +.+|.+|++.+|+||+|+||+|.++.+
T Consensus 78 ~---------------------------------------------------~~~Y~~v~~~~l~gi~l~vf~~~~~~~- 105 (310)
T smart00128 78 G---------------------------------------------------DGQYNVLAKVRLVGILVLVFVKANHLV- 105 (310)
T ss_pred C---------------------------------------------------CCceEEEeeeeecceEEEEEEehhhcC-
Confidence 2 367999999999999999999999998
Q ss_pred cccccceeeeeeeccccccCCceEEEEEEEEcCeEEEEEEeccCCCCCCchhhHhhHHHHHHHHhCCCCCCCCCCCCCCC
Q 011549 215 YCISNVKVCSVACGIMGYLGNKGSVSVSMSIEGTSFCFVAAHLASGEKKGDEGRRNHQVSEIFKRTSFPRSPNDDDNPHP 294 (483)
Q Consensus 215 ~~I~~V~~~~v~tG~~g~~GNKGaV~ir~~i~~t~~~FVn~HLaA~~~~~~~~rRn~d~~~I~~~~~F~~~~~~~~~~~~ 294 (483)
+|++|.++.+++|++|.+||||||+++|.+++++||||||||+||+.+ ..+||+||..|++++.|+....
T Consensus 106 -~i~~v~~~~v~~G~~~~~~nKG~v~i~~~~~~~~~~fv~~HL~a~~~~--~~~R~~~~~~I~~~~~f~~~~~------- 175 (310)
T smart00128 106 -YIKDVETFTVKTGMGGLWGNKGAVAVRFKLSDTSFCFVNSHLAAGASN--VEQRNQDYKTILRALSFPERAE------- 175 (310)
T ss_pred -ccceeEeeeeeccccceeecCceEEEEEEEcCcEEEEEeeccccccch--hhhhHHHHHHHHHhcCCCCCcc-------
Confidence 999999999999999999999999999999999999999999999876 4679999999999999976432
Q ss_pred CccccccceEEecccccccccCh-HHHHHHHHhcChhhhhhcccchHHHHcCCCccCcccCCccCCCCcccC-CCCCCCC
Q 011549 295 LTILGHDQIFWFGDLNYRLYLED-NLARHLIKKQDWRGLQEFDQLRREQEEGGVFQGWREGNIEFPPTYKYS-SSNCNRY 372 (483)
Q Consensus 295 ~~i~~~d~vfw~GDLNYRI~~~~-~~v~~li~~~~~~~Ll~~DQL~~e~~~g~~F~~f~E~~I~F~PTYKy~-~gt~~~Y 372 (483)
..+.+||++||||||||||+++. ++++++|++++|..|+++|||+.+++++.+|.+|.|++|+|||||||+ .|+ +.|
T Consensus 176 ~~~~~~d~~f~~GDlNyRi~~~~~~~v~~~i~~~~~~~Ll~~DQL~~~~~~~~~f~~f~E~~I~F~PTYK~~~~~t-~~Y 254 (310)
T smart00128 176 LSQFDHDVVFWFGDLNFRLDSPSYEEVRRKISKKEFDDLLEKDQLNRQKEAGKVFKGFQEGPITFPPTYKYDSVGT-ETY 254 (310)
T ss_pred ccccccceEEEecCcceeecCCCHHHHHHHHhhCcHHHHhhhhhHHHHhhcccccCcCccCCcCCCCCeeecCCCC-ccc
Confidence 12568999999999999999987 899999999999999999999999999999999999999999999999 899 999
Q ss_pred CCCCCCCCCCCCCCcccccceeeec--cCeeEEe-eccC-CCCCCCcccccceEEEEEEEe
Q 011549 373 SGGGPNRSGEKPRTPAWCDRILWYG--KGVKQLS-YFRS-ESRFSDHRPVSALFSTQVEVT 429 (483)
Q Consensus 373 d~~~~~dts~k~R~PSWcDRIL~~~--~~i~~l~-Y~s~-~~~~SDHkPV~a~F~v~v~~~ 429 (483)
+ +++|+|+|||||||||+. ..+.++. |.+. ++++||||||+|.|.+.+..+
T Consensus 255 d------~~~k~R~PsWcDRIL~~~~~~~~~~~~~Y~s~~~~~~SDHkPV~~~f~v~~~~~ 309 (310)
T smart00128 255 D------TSEKKRVPAWCDRILYRSNGPNLIQLSEYHSGMELTTSDHKPVFATFRLKVTAV 309 (310)
T ss_pred c------CcccccCcchhheehhhccCCCceecccccCCCccCCcCcccccEEEEEEEEec
Confidence 5 888999999999999994 3456665 9886 569999999999999998754
No 4
>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-70 Score=562.29 Aligned_cols=333 Identities=34% Similarity=0.560 Sum_probs=296.0
Q ss_pred CccccCCCCchhhcccCCCCCCCChhhHHHhhhcccCccccccceEEEEEEeeCCCCCCCCCchhchhhhcCCC--C--C
Q 011549 19 KPKKADPYHINEISDAGEDDGDDSMDDVEEVVSAEMDPCISTNKLRIFVGTWNVAGRSPVGSLAVDLDEWLNLK--D--A 94 (483)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~I~v~TWNV~g~~P~~~l~~dL~~wL~~~--~--~ 94 (483)
.+-+|||.|.+ +.. .+ +|.++ .+...+++++|++|+|.+|+.|.. ++..||.+. . .
T Consensus 2 pv~i~~p~~~y-~~~--------~l---~~~~s----k~~~~~~~~~f~~~~n~~~~~~k~----~~k~~lfP~~~~~~~ 61 (460)
T COG5411 2 PVPIYDPRHPY-IVA--------VL---RQRRS----KYVIEKDVSIFVSTFNPPGKPPKA----STKRWLFPEIEATEL 61 (460)
T ss_pred CccccCCCchh-HHH--------HH---HHHhh----hheeecceeeEeccccCCCCCchh----hhhhhcccccccccc
Confidence 46789999998 544 33 23332 335778999999999999998843 579999882 2 7
Q ss_pred CcEEEEEEEeeecCccccccCCCCchhhhHHHHHHHHHhcccCCCCCCCCCCCCCcCccccchhhhhhhhcccccCCCcc
Q 011549 95 ADMYVLGFQEIVPLKARTVIGAEDPTEATNWNLLIGKTLNNKYGCPWLSPKFSQNISSDSYLLDTEMESSLSSRAKTPKK 174 (483)
Q Consensus 95 ~DIyVIGlQEiv~l~~~~~~g~~d~~~~~~W~~~i~~~Ln~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 174 (483)
+|+||+||||+++++++++++..-......|+..+...||...
T Consensus 62 ~dlyVvGlQEvv~lt~~sils~~p~~rl~~wes~~~~~Ln~~~------------------------------------- 104 (460)
T COG5411 62 ADLYVVGLQEVVELTPGSILSADPYDRLRIWESKVLDCLNGAQ------------------------------------- 104 (460)
T ss_pred cceEEeccceeeeccchhhccCCcccccchhHHHHHHHhcccc-------------------------------------
Confidence 9999999999999999999876534556899999999998510
Q ss_pred chhhhccccccCCCCEEEEEEeeeeeEEEEEEEecCcccccccccceeeeeeeccccccCCceEEEEEEEEcCeEEEEEE
Q 011549 175 EWWRTQSEKLYWGSKYKLMASKKMVGVLISVWIRRELLRKYCISNVKVCSVACGIMGYLGNKGSVSVSMSIEGTSFCFVA 254 (483)
Q Consensus 175 ~~~~~~~~~~~~~~~Y~~V~s~qlvGi~l~Vfvr~~l~~~~~I~~V~~~~v~tG~~g~~GNKGaV~ir~~i~~t~~~FVn 254 (483)
...+|.++.+.||+|+++.||++.+..+ .+.+|..+..+||++|..+|||+|+++|.+..+.+||||
T Consensus 105 -----------~~eky~~l~s~q~~~~~~~vf~~~~~~~--v~~~V~~~~~KtG~gg~s~nKGav~i~~~~~~t~~cFv~ 171 (460)
T COG5411 105 -----------SDEKYSLLRSPQLGGILLRVFSLATNLP--VVKPVSGTVKKTGFGGSSSNKGAVAIRFNYERTSFCFVN 171 (460)
T ss_pred -----------cCCceEEecchhccCcceEEeeeccccc--eeccccccccccccceecccccccceeEEeecCCcEEEe
Confidence 3678999999999999999999999988 999999999999999999999999999999999999999
Q ss_pred eccCCCCCCchhhHhhHHHHHHHHhCCCCCCCCCCCCCCCCccccccceEEecccccccccChHHHHHHHHhcC--hhhh
Q 011549 255 AHLASGEKKGDEGRRNHQVSEIFKRTSFPRSPNDDDNPHPLTILGHDQIFWFGDLNYRLYLEDNLARHLIKKQD--WRGL 332 (483)
Q Consensus 255 ~HLaA~~~~~~~~rRn~d~~~I~~~~~F~~~~~~~~~~~~~~i~~~d~vfw~GDLNYRI~~~~~~v~~li~~~~--~~~L 332 (483)
|||+||.++. ++|+.||+.|.+.+.|+++ ..|.+||++||+|||||||++.+++++..+...+ +.+|
T Consensus 172 shlaag~~N~--eeR~~Dy~~I~~~i~f~~g---------~~I~~hdti~w~GDlNyRVts~~e~v~~~~~~~~g~~~~l 240 (460)
T COG5411 172 SHLAAGVNNI--EERIFDYRSIASNICFSRG---------LRIYDHDTIFWLGDLNYRVTSTNEEVRPEIASDDGRLDKL 240 (460)
T ss_pred cchhcccccH--HHHHHHHHHHHHheecCCC---------ceecccceEEEecccCceeecCchhcchhhhCCcchhhhh
Confidence 9999999875 4699999999999999765 4688999999999999999999999999998877 8889
Q ss_pred hhcccchHHHHcCCCccCcccCCccCCCCcccCCCCCCCCCCCCCCCCCCCCCCcccccceeeeccCeeEEeeccCC-CC
Q 011549 333 QEFDQLRREQEEGGVFQGWREGNIEFPPTYKYSSSNCNRYSGGGPNRSGEKPRTPAWCDRILWYGKGVKQLSYFRSE-SR 411 (483)
Q Consensus 333 l~~DQL~~e~~~g~~F~~f~E~~I~F~PTYKy~~gt~~~Yd~~~~~dts~k~R~PSWcDRIL~~~~~i~~l~Y~s~~-~~ 411 (483)
+++|||..+|+.|.+|.+|.|..|+|||||||+.|+ ++|| +++|.|+|||||||||++......+|.+++ ++
T Consensus 241 ~~~DqL~~e~~~g~~f~~f~E~~i~FpPTYKfd~gt-~~yd------tsdk~RiPsWtDRIl~~s~~~~p~sY~sip~l~ 313 (460)
T COG5411 241 FEYDQLLWEMEVGNVFPGFKEPVITFPPTYKFDYGT-DEYD------TSDKGRIPSWTDRILYKSEQLTPHSYSSIPHLM 313 (460)
T ss_pred hhhhhHhhhhcccccccceecccccCCCceEeecCC-cccc------ccccccCCchhhhhhhhccccccccccccCcee
Confidence 999999999999999999999999999999999999 9995 899999999999999999988999999998 79
Q ss_pred CCCcccccceEEEEEEEecCCccccccc
Q 011549 412 FSDHRPVSALFSTQVEVTRSNPKAVAMQ 439 (483)
Q Consensus 412 ~SDHkPV~a~F~v~v~~~~~~~~~~~l~ 439 (483)
+||||||+|+|.+++.+.+..+|....-
T Consensus 314 ~SDHrPV~a~~~~~i~~~d~~~k~~~~~ 341 (460)
T COG5411 314 ISDHRPVYATFRAKIKVVDPSKKEGLIE 341 (460)
T ss_pred ecCCCeEEEEEecceEEeCcchhhhhhh
Confidence 9999999999999999988766654433
No 5
>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional
Probab=99.96 E-value=2.7e-30 Score=254.86 Aligned_cols=178 Identities=27% Similarity=0.384 Sum_probs=130.1
Q ss_pred ccCCceEEEEEEEEcCeEEEEEEeccCCCCCCchh---------hHhhHHHHHHHHhCCCCCCCCCCCCCCCCccccccc
Q 011549 232 YLGNKGSVSVSMSIEGTSFCFVAAHLASGEKKGDE---------GRRNHQVSEIFKRTSFPRSPNDDDNPHPLTILGHDQ 302 (483)
Q Consensus 232 ~~GNKGaV~ir~~i~~t~~~FVn~HLaA~~~~~~~---------~rRn~d~~~I~~~~~F~~~~~~~~~~~~~~i~~~d~ 302 (483)
.++.||.+.+|++++++.|||||+||.++..+... ..|..+|..|+.+.. ..+..+++
T Consensus 64 kwSRKGfmrtrw~i~~t~fdfVNiHLFHDaSNl~A~~tSPSiYS~~RqrAL~~iL~r~~-------------~~~~~~~~ 130 (356)
T PTZ00312 64 GRSRKGFLLLSLRLGTVVVNVLNVHLYNDDDNRVAAASSPSLYTGQRQEALLEAIAECS-------------AFISPSDP 130 (356)
T ss_pred CccccceEEEEEEECCEEEEEEEeeccCCcchhhHHhcCCchhHHHHHHHHHHHHHHHh-------------hccCCCCc
Confidence 47899999999999999999999999999987543 357788888887531 12345789
Q ss_pred eEEecccccccccChH--HHHH------HHH------hcChhhhhhcccchHHHHc-------------CCCccCcccCC
Q 011549 303 IFWFGDLNYRLYLEDN--LARH------LIK------KQDWRGLQEFDQLRREQEE-------------GGVFQGWREGN 355 (483)
Q Consensus 303 vfw~GDLNYRI~~~~~--~v~~------li~------~~~~~~Ll~~DQL~~e~~~-------------g~~F~~f~E~~ 355 (483)
+|||||||||++...- .+++ .+. ...|.+|++.|||.+|++. .+.|.++.|++
T Consensus 131 lF~fGDfNyRld~~~~~e~L~ek~Ql~ve~~~g~~~~P~hf~~Lf~~dQl~rE~~~fd~e~q~l~~~va~~s~~eLaE~p 210 (356)
T PTZ00312 131 LFIFGDFNVRLDGHNLLEWLKEKMQIDVKIEVKRVRAPDRFWELFTNPQTQGEIRRFDLELQRLMDVVAQQSGVELAEFA 210 (356)
T ss_pred EEEeccceeeeccccHHHHhcccccccccccccccCChHHHHHHhcChhhhHHHhhhhhhhhhhhhhhhhhcccchhccc
Confidence 9999999999995321 1111 111 2358899999999999985 56778999999
Q ss_pred ccCCCCcccCCCCC---------------CCCC---------------------CCCC---------------CCCCCCC
Q 011549 356 IEFPPTYKYSSSNC---------------NRYS---------------------GGGP---------------NRSGEKP 384 (483)
Q Consensus 356 I~F~PTYKy~~gt~---------------~~Yd---------------------~~~~---------------~dts~k~ 384 (483)
|+||||||.....+ ..|. |..+ .....+.
T Consensus 211 I~FpPTYkrva~r~~~~~~~~~a~~~~~a~~~~~~d~~~~~~~~~~~~~~~~~~g~~d~i~~~~~l~~~ta~P~r~~~~~ 290 (356)
T PTZ00312 211 IRFPPTYPRVAERTNTGAQIESAGANVAASVYGVKDVAAKLDNQQRKKAAKDLKGTADAILASVVLTRVTAIPHRNYCRD 290 (356)
T ss_pred ccCCCcchhhhhhcCCcchhhhcccccccchhcccccccccccccccchhhhccCccceeeeeeeeecccccCCcchhcc
Confidence 99999999432110 0110 0000 1244688
Q ss_pred CCcccccceeeeccC----------------------------eeEEeeccCCCCCCCcccccceE
Q 011549 385 RTPAWCDRILWYGKG----------------------------VKQLSYFRSESRFSDHRPVSALF 422 (483)
Q Consensus 385 R~PSWcDRIL~~~~~----------------------------i~~l~Y~s~~~~~SDHkPV~a~F 422 (483)
|+|||||||||.... .....|.+.++..+||.||+..|
T Consensus 291 r~pawcdrvl~~~~~~~~~~~~r~~~a~~~~~aa~~~~~~~~~~~~~~Y~s~~L~htDH~~V~~lF 356 (356)
T PTZ00312 291 RLPAWCDRVLWNPAGLELMTGDRSRSASPQSAAASKGDQASGQSCRYAYRSIDLIHTDHDGVFLLF 356 (356)
T ss_pred cchhhhheeeechhhhhhhcCccccCCCcchhhhccCCcccchhhhheeeeeeeeeccCccceecC
Confidence 999999999997321 12357888888999999998765
No 6
>KOG0565 consensus Inositol polyphosphate 5-phosphatase and related proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=2e-25 Score=203.34 Aligned_cols=142 Identities=45% Similarity=0.710 Sum_probs=124.6
Q ss_pred CEEEEEEeeeeeEEEEEEEecCcccccccccceeeeeeeccccccCCceEEEEEEEEcCeEEEEEEeccCCCCCCchhhH
Q 011549 189 KYKLMASKKMVGVLISVWIRRELLRKYCISNVKVCSVACGIMGYLGNKGSVSVSMSIEGTSFCFVAAHLASGEKKGDEGR 268 (483)
Q Consensus 189 ~Y~~V~s~qlvGi~l~Vfvr~~l~~~~~I~~V~~~~v~tG~~g~~GNKGaV~ir~~i~~t~~~FVn~HLaA~~~~~~~~r 268 (483)
.|..+.+.+|+|+.+.+|++.++.. ++.+++++++++|++|.+||||+|++++.++++.+|||+|||+||..+.. ++
T Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~v~~g~~~~~~nkg~v~is~~~~~~~~~~v~~hl~~~~~~~~-~~ 78 (145)
T KOG0565|consen 2 LYVVVASGRLVGIDLSVLLRRDLLD--HSFNVRVSEVGTGIMGYLGNKGGVAISFVLSQTSFCFVISHLTSGVHKVY-ER 78 (145)
T ss_pred cEEEEeeeEEEEEEEEEEehhhhhh--hhcccEEEEecceEEEEeCCCCeEEEEEEEcCceEEEEEecccccchhhH-HH
Confidence 5899999999999999999999999 99999999999999999999999999999999999999999999988754 33
Q ss_pred hhHHHHHHHHhCCCCCCCCCCCCCCCCcccc-ccceEEecccccccccC-hHHHHHHHHhcChhhhhhcc
Q 011549 269 RNHQVSEIFKRTSFPRSPNDDDNPHPLTILG-HDQIFWFGDLNYRLYLE-DNLARHLIKKQDWRGLQEFD 336 (483)
Q Consensus 269 Rn~d~~~I~~~~~F~~~~~~~~~~~~~~i~~-~d~vfw~GDLNYRI~~~-~~~v~~li~~~~~~~Ll~~D 336 (483)
||+||.+|+..+.|+...... .+..+.. ||.|||+||||||+..+ ..++...+..+.++.|+++|
T Consensus 79 r~~d~~~i~~~~~~~~~~~~~---~~~~~~~~~D~v~w~GDlN~Rl~~~~~~~~~~~~~~~~~~~l~~~d 145 (145)
T KOG0565|consen 79 RNEDYQEILNGLRFPSVSPAS---EPVISDGEHDTVIWLGDLNYRLSGPSYLEVRTLISVKSRDGLLEKD 145 (145)
T ss_pred hhccHHHHHhhccccccCccc---ccccccccccEEEEecceeeeecCcccccchhhhhhcchhhhhccC
Confidence 999999999999997554322 2222222 79999999999999987 77888889999988888876
No 7
>KOG1976 consensus Inositol polyphosphate 5-phosphatase, type I [Lipid transport and metabolism]
Probab=99.75 E-value=7.7e-19 Score=174.15 Aligned_cols=166 Identities=31% Similarity=0.471 Sum_probs=107.7
Q ss_pred cCCceEEEEEEEEcCeEEEEEEeccCCCCCCchh---------hHhhHHHHHHHHhCCCCCCCCCCCCCCCCccccccce
Q 011549 233 LGNKGSVSVSMSIEGTSFCFVAAHLASGEKKGDE---------GRRNHQVSEIFKRTSFPRSPNDDDNPHPLTILGHDQI 303 (483)
Q Consensus 233 ~GNKGaV~ir~~i~~t~~~FVn~HLaA~~~~~~~---------~rRn~d~~~I~~~~~F~~~~~~~~~~~~~~i~~~d~v 303 (483)
++.||-.-.|++|.+..|.|||.||-...++... ..|.+...-+++.+.= .=...|.+
T Consensus 154 ~~rkg~~~~r~~I~~k~fdfVN~hLFhD~snla~~~sspt~ys~~R~~al~~vL~el~~-------------~~~~~~~~ 220 (391)
T KOG1976|consen 154 NQRKGFLLARFRIHGKEFDFVNLHLFHDVSNLATKNSSPTKYSSKREQALEMVLKELDE-------------EGLRNDAI 220 (391)
T ss_pred hhhccccceeEEEcCceeeeeehhhhcchhhhhhhcCChhhhhhhHHHHHHHHHHHHHh-------------hccCceEE
Confidence 6789999999999999999999999666543321 2455555555655421 11245789
Q ss_pred EEecccccccccCh-----------HHHH--------HHH---------------HhcChh-------------hhhhcc
Q 011549 304 FWFGDLNYRLYLED-----------NLAR--------HLI---------------KKQDWR-------------GLQEFD 336 (483)
Q Consensus 304 fw~GDLNYRI~~~~-----------~~v~--------~li---------------~~~~~~-------------~Ll~~D 336 (483)
|+|||||||++... ..+. ++| ..+.|+ .++.+|
T Consensus 221 fVfGdfNfrLds~s~ln~l~a~q~~qtv~~~d~~~vv~~ifr~esd~drkv~l~vEkk~FDyfnh~~f~d~~r~~~~~~d 300 (391)
T KOG1976|consen 221 FVFGDFNFRLDSTSLLNYLAATQLVQTVAKKDEDGVVESIFRVESDGDRKVTLTVEKKRFDYFNHDWFFDLGRGMVKRYD 300 (391)
T ss_pred EEecccccccchHHHHHHHhcCCccchhhhcccCcceeeEEeecccCCceeEEEeehhhcchhhhHHHHHcCchhhhhcc
Confidence 99999999998421 0011 111 011111 122222
Q ss_pred cchHHHHcCCCccC-cccCCccCCCCcccCCCCCCCCCCCCCCCCCCCCCCcccccceeeecc----------CeeEEee
Q 011549 337 QLRREQEEGGVFQG-WREGNIEFPPTYKYSSSNCNRYSGGGPNRSGEKPRTPAWCDRILWYGK----------GVKQLSY 405 (483)
Q Consensus 337 QL~~e~~~g~~F~~-f~E~~I~F~PTYKy~~gt~~~Yd~~~~~dts~k~R~PSWcDRIL~~~~----------~i~~l~Y 405 (483)
- +-..|.. ..|..|.|||||.|..+. .. ..+-.+.|+||||||||+... ..+.+.|
T Consensus 301 k------El~nf~~kl~E~~i~FpPsypysed~-~~------~E~~m~TrcPAWcDRILmn~~a~eLv~~~e~e~~~~~Y 367 (391)
T KOG1976|consen 301 K------ELANFAFKLKEETIFFPPSYPYSEDD-SG------KEEFMRTRCPAWCDRILMNDRANELVKHDEFEASGLYY 367 (391)
T ss_pred h------HHHHHHHHHhheeecCCCCCCCCcCc-cc------hHHHHhccChHhhhhhhcCccHHHHhhccccCccccee
Confidence 1 1123443 789999999999998755 11 123368999999999999642 1234668
Q ss_pred ccC--CCCCCCcccccceEEE
Q 011549 406 FRS--ESRFSDHRPVSALFST 424 (483)
Q Consensus 406 ~s~--~~~~SDHkPV~a~F~v 424 (483)
... +.+.-|||||+..|++
T Consensus 368 ~~vg~e~c~GdHKpVfl~~~i 388 (391)
T KOG1976|consen 368 GLVGEEKCVGDHKPVFLHASI 388 (391)
T ss_pred cccccccccCCCcceEEEEee
Confidence 765 4589999999998865
No 8
>TIGR03395 sphingomy sphingomyelin phosphodiesterase. Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins.
Probab=98.93 E-value=3.6e-08 Score=99.77 Aligned_cols=147 Identities=21% Similarity=0.248 Sum_probs=84.6
Q ss_pred ccCCceEEEEEEEEcCeEEEEEEeccCCCCCC----chhhHhhHHHHHHHHhCCCCCCCCCCCCCCCCccccccceEEec
Q 011549 232 YLGNKGSVSVSMSIEGTSFCFVAAHLASGEKK----GDEGRRNHQVSEIFKRTSFPRSPNDDDNPHPLTILGHDQIFWFG 307 (483)
Q Consensus 232 ~~GNKGaV~ir~~i~~t~~~FVn~HLaA~~~~----~~~~rRn~d~~~I~~~~~F~~~~~~~~~~~~~~i~~~d~vfw~G 307 (483)
...+||.+.+++.+.+..+.|+|.||.+.... .....|..+...|.+.+.-. .+...+.+|++|
T Consensus 117 ~~~~kg~l~a~i~~~g~~~~v~~THL~~~~~~~~~~~~~~~R~~Q~~~i~~~i~~~------------~~~~~~pvIl~G 184 (283)
T TIGR03395 117 NLSNKGFAYVKINKNGKKFHVIGTHLQAQDSMCSKLGPASIRANQLNEIQDFIDSK------------NIPKDETVLIGG 184 (283)
T ss_pred cccCCceEEEEEecCCeEEEEEEeCCCCCcccccccccHHHHHHHHHHHHHHHhhc------------cCCCCceEEEEe
Confidence 35789999999999999999999999986421 11345888888876653210 011235799999
Q ss_pred ccccccccChHHHHHHHHhcChhhhhhcccchHHHHcCCCccCcccCCccCCCCcccCCCCCCCCCCCCCCCCCCCCCCc
Q 011549 308 DLNYRLYLEDNLARHLIKKQDWRGLQEFDQLRREQEEGGVFQGWREGNIEFPPTYKYSSSNCNRYSGGGPNRSGEKPRTP 387 (483)
Q Consensus 308 DLNYRI~~~~~~v~~li~~~~~~~Ll~~DQL~~e~~~g~~F~~f~E~~I~F~PTYKy~~gt~~~Yd~~~~~dts~k~R~P 387 (483)
|||-.=+ ..+... +........ .+|. .|.|-||+.. |.|... +. .+-.|
T Consensus 185 DfN~~~~--s~~~~~---------------ml~~l~~~~--p~~~------g~~~T~d~~~-N~~a~~----~~-~~~~~ 233 (283)
T TIGR03395 185 DLNVNKG--SNEYHD---------------MFKTLNVSE--PRYV------GVPATWDATT-NSIAKY----YY-PKEEP 233 (283)
T ss_pred eCCCCCC--CHHHHH---------------HHHHhcccC--CCcC------CCCCCcCCCc-Cchhhh----hc-CCCCc
Confidence 9994322 122222 211111111 1121 2455557766 655321 11 12236
Q ss_pred ccccceeeeccCe----------eEEeec----cCC-CCCCCcccccce
Q 011549 388 AWCDRILWYGKGV----------KQLSYF----RSE-SRFSDHRPVSAL 421 (483)
Q Consensus 388 SWcDRIL~~~~~i----------~~l~Y~----s~~-~~~SDHkPV~a~ 421 (483)
.+-||||+++... ..++.. ... ...|||.||+|.
T Consensus 234 ~~lDyvl~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~sdh~~v~~~ 282 (283)
T TIGR03395 234 EYLDYIFVSKSHAQPPVWQNKVLDPKSVTSWFKKYTYDDFSDHYPVYGF 282 (283)
T ss_pred ceEEEEEEECCCCCCccccceEEeccccccccccccccccccccceeee
Confidence 6899999985321 111211 112 379999999974
No 9
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling []. Proteins this domain is found in include: AP endonuclease proteins (4.2.99.18 from EC), DNase I proteins (3.1.21.1 from EC), Synaptojanin an inositol-1,4,5-trisphosphate phosphatase (3.1.3.56 from EC) and Sphingomyelinase (3.1.4.12 from EC).; PDB: 2J63_A 2JC4_A 3TEB_B 3MTC_A 3N9V_B 1ZWX_A 2F1N_A 1Y21_A 1NTF_A 2IMQ_X ....
Probab=98.93 E-value=5.5e-10 Score=104.68 Aligned_cols=59 Identities=27% Similarity=0.311 Sum_probs=36.3
Q ss_pred eeEEEEEEEecCcccccccccceeeeeeeccc---cccCCceEEEEEEEEcCeEEEEEEeccCCCC
Q 011549 199 VGVLISVWIRRELLRKYCISNVKVCSVACGIM---GYLGNKGSVSVSMSIEGTSFCFVAAHLASGE 261 (483)
Q Consensus 199 vGi~l~Vfvr~~l~~~~~I~~V~~~~v~tG~~---g~~GNKGaV~ir~~i~~t~~~FVn~HLaA~~ 261 (483)
.+..++++.|.++.. .+..........+.. ....+++.+.+++. +..|+++++|+.+..
T Consensus 72 ~~~g~~i~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~~~H~~~~~ 133 (249)
T PF03372_consen 72 GGYGVAILSRSPIFS--SVSYVFSLFSKPGIRIFRRSSKSKGIVPVSIN--GKPITVVNVHLPSSN 133 (249)
T ss_dssp SSEEEEEEESSCCCE--EEEEEEEEESSSTTCEEEEEEEEEEEEEEEEE--TEEEEEEEEETTSHH
T ss_pred cCceEEEEEcccccc--cccccccccccccccccccccccccccccccc--ceEEEeeeccccccc
Confidence 456678888887654 333333222222221 22345666666666 999999999999853
No 10
>PRK05421 hypothetical protein; Provisional
Probab=98.93 E-value=3.9e-08 Score=98.11 Aligned_cols=58 Identities=16% Similarity=0.192 Sum_probs=40.8
Q ss_pred CceEEEEEEEE-cCeEEEEEEeccCCCCCCchhhHhhHHHHHHHHhCCCCCCCCCCCCCCCCccccccceEEecccc
Q 011549 235 NKGSVSVSMSI-EGTSFCFVAAHLASGEKKGDEGRRNHQVSEIFKRTSFPRSPNDDDNPHPLTILGHDQIFWFGDLN 310 (483)
Q Consensus 235 NKGaV~ir~~i-~~t~~~FVn~HLaA~~~~~~~~rRn~d~~~I~~~~~F~~~~~~~~~~~~~~i~~~d~vfw~GDLN 310 (483)
-||++.+.+.+ .+..+.++|+||.+.... .+.|..+...|.+.+. . ....+|++||||
T Consensus 134 ~r~~l~a~~~~~~g~~l~v~ntHl~~~~~~--~~~r~~q~~~l~~~~~---~-------------~~~p~Il~GDFN 192 (263)
T PRK05421 134 PKSALITEYPLPNGRTLLVVNIHAINFSLG--VDVYSKQLEPIGDQIA---H-------------HSGPVILAGDFN 192 (263)
T ss_pred cceeEEEEEEeCCCCEEEEEEECccccCcC--hHHHHHHHHHHHHHHH---h-------------CCCCEEEEcccc
Confidence 37999999998 566799999999875322 2346667766655421 0 014689999999
No 11
>PRK11756 exonuclease III; Provisional
Probab=98.76 E-value=8.1e-08 Score=95.43 Aligned_cols=27 Identities=7% Similarity=0.265 Sum_probs=21.7
Q ss_pred CceEEEEEEEEcCeEEEEEEeccCCCC
Q 011549 235 NKGSVSVSMSIEGTSFCFVAAHLASGE 261 (483)
Q Consensus 235 NKGaV~ir~~i~~t~~~FVn~HLaA~~ 261 (483)
..+.+.+.+...+..+.|+|+|++.+.
T Consensus 88 ~~r~l~~~i~~~~g~~~v~n~y~P~~~ 114 (268)
T PRK11756 88 QRRIIMATIPTPNGNLTVINGYFPQGE 114 (268)
T ss_pred cCCEEEEEEEcCCCCEEEEEEEecCCC
Confidence 457888888876556999999998875
No 12
>TIGR00633 xth exodeoxyribonuclease III (xth). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.67 E-value=2.7e-07 Score=90.02 Aligned_cols=35 Identities=31% Similarity=0.485 Sum_probs=22.9
Q ss_pred EEEEeeCCCCCCCCCchhch-hhhcCCCCCCcEEEEEEEeee
Q 011549 66 FVGTWNVAGRSPVGSLAVDL-DEWLNLKDAADMYVLGFQEIV 106 (483)
Q Consensus 66 ~v~TWNV~g~~P~~~l~~dL-~~wL~~~~~~DIyVIGlQEiv 106 (483)
-|+||||+|...... .+ .+|+... .||| |+|||+-
T Consensus 2 ri~t~Nv~g~~~~~~---~~~~~~l~~~-~~DI--v~LQE~~ 37 (255)
T TIGR00633 2 KIISWNVNGLRARLH---KLFLDWLKEE-QPDV--LCLQETK 37 (255)
T ss_pred EEEEEecccHHHHhh---ccHHHHHHhc-CCCE--EEEEecc
Confidence 589999998654222 23 5666432 6776 6789983
No 13
>PRK13911 exodeoxyribonuclease III; Provisional
Probab=98.51 E-value=2e-06 Score=85.73 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=24.8
Q ss_pred EEEEeeCCCCCCCCCchhchhhhcCCCCCCcEEEEEEEee
Q 011549 66 FVGTWNVAGRSPVGSLAVDLDEWLNLKDAADMYVLGFQEI 105 (483)
Q Consensus 66 ~v~TWNV~g~~P~~~l~~dL~~wL~~~~~~DIyVIGlQEi 105 (483)
-|+||||||-.-.-. ..+.+||.. ..||| |+|||+
T Consensus 2 ki~swNVNgir~~~~--~~~~~~l~~-~~~DI--iclQEt 36 (250)
T PRK13911 2 KLISWNVNGLRACMT--KGFMDFFNS-VDADV--FCIQES 36 (250)
T ss_pred EEEEEEeCChhHhhh--hhHHHHHHh-cCCCE--EEEEee
Confidence 479999999754321 146789864 36786 688998
No 14
>COG3568 ElsH Metal-dependent hydrolase [General function prediction only]
Probab=98.44 E-value=2.7e-06 Score=84.98 Aligned_cols=71 Identities=21% Similarity=0.407 Sum_probs=48.8
Q ss_pred ccccceeeeeee--ccccccCCceEEEEEEEEc-CeEEEEEEeccCCCCCCchhhHhhHHHHHHHHhCCCCCCCCCCCCC
Q 011549 216 CISNVKVCSVAC--GIMGYLGNKGSVSVSMSIE-GTSFCFVAAHLASGEKKGDEGRRNHQVSEIFKRTSFPRSPNDDDNP 292 (483)
Q Consensus 216 ~I~~V~~~~v~t--G~~g~~GNKGaV~ir~~i~-~t~~~FVn~HLaA~~~~~~~~rRn~d~~~I~~~~~F~~~~~~~~~~ 292 (483)
.|.++....++. |+ --.|++.+.+... +..|.++|.||+=.+ +.|-++...|+..+.++.
T Consensus 101 pi~~v~~~~lp~~~~~----~~Rgal~a~~~~~~g~~l~V~~~HL~l~~-----~~R~~Q~~~L~~~~~l~~-------- 163 (259)
T COG3568 101 PIRDVENLALPDPTGL----EPRGALLAEIELPGGKPLRVINAHLGLSE-----ESRLRQAAALLALAGLPA-------- 163 (259)
T ss_pred cccchhhccCCCCCCC----CCceeEEEEEEcCCCCEEEEEEEeccccH-----HHHHHHHHHHHhhccCcc--------
Confidence 466666655553 33 2379999999985 779999999999432 346777777776332221
Q ss_pred CCCccccccceEEecccc
Q 011549 293 HPLTILGHDQIFWFGDLN 310 (483)
Q Consensus 293 ~~~~i~~~d~vfw~GDLN 310 (483)
-..+++|||||
T Consensus 164 -------~~p~vl~GDFN 174 (259)
T COG3568 164 -------LNPTVLMGDFN 174 (259)
T ss_pred -------cCceEEEccCC
Confidence 12799999999
No 15
>PTZ00297 pantothenate kinase; Provisional
Probab=98.32 E-value=3.3e-05 Score=93.24 Aligned_cols=69 Identities=12% Similarity=0.164 Sum_probs=41.9
Q ss_pred cCCceEEEEEEEEc----C-eEEEEEEeccCCCCCCchhhHhhHHHHHHHHh-C-CCCCCCCCCCCCCCCccccccceEE
Q 011549 233 LGNKGSVSVSMSIE----G-TSFCFVAAHLASGEKKGDEGRRNHQVSEIFKR-T-SFPRSPNDDDNPHPLTILGHDQIFW 305 (483)
Q Consensus 233 ~GNKGaV~ir~~i~----~-t~~~FVn~HLaA~~~~~~~~rRn~d~~~I~~~-~-~F~~~~~~~~~~~~~~i~~~d~vfw 305 (483)
..+||.+.+.+.+. + ..+.|+|.||.+........+|..+..+++.. + .|... ........+|+
T Consensus 130 ~~~RG~L~a~I~vp~~~g~~~~v~v~~tHL~~~~~~~~R~~Q~~ql~~~i~~~i~~~~~~---------~~~~~~~PvIL 200 (1452)
T PTZ00297 130 SVRRGCLFAEVEVPLAEGGSQRIVFFNVHLRQEDSLPSTSSQVQETRRFVESVIANVYEQ---------NNDGAEIPFVI 200 (1452)
T ss_pred ccccceEEEEEEccccCCCCceEEEEEeCCCCCCCcchHHHHHHHHHHHHHHhhhhhccc---------ccCCCCCCEEE
Confidence 35899999999884 2 57999999999885432222334444444432 1 11000 01112358999
Q ss_pred ecccc
Q 011549 306 FGDLN 310 (483)
Q Consensus 306 ~GDLN 310 (483)
+||||
T Consensus 201 aGDFN 205 (1452)
T PTZ00297 201 AGDFN 205 (1452)
T ss_pred EeeCC
Confidence 99999
No 16
>TIGR00195 exoDNase_III exodeoxyribonuclease III. The model brings in reverse transcriptases at scores below 50, model also contains eukaryotic apurinic/apyrimidinic endonucleases which group in the same family
Probab=98.28 E-value=8.2e-06 Score=80.39 Aligned_cols=34 Identities=26% Similarity=0.364 Sum_probs=22.9
Q ss_pred EEEEeeCCCCCCCCCchhchhhhcCCCCCCcEEEEEEEee
Q 011549 66 FVGTWNVAGRSPVGSLAVDLDEWLNLKDAADMYVLGFQEI 105 (483)
Q Consensus 66 ~v~TWNV~g~~P~~~l~~dL~~wL~~~~~~DIyVIGlQEi 105 (483)
-|+||||+|...... .+..||... .|||+ +|||+
T Consensus 2 ri~t~Ni~g~~~~~~---~~~~~l~~~-~~DIi--~LQE~ 35 (254)
T TIGR00195 2 KIISWNVNGLRARLH---KGLAWLKEN-QPDVL--CLQET 35 (254)
T ss_pred EEEEEEcCcHHHhHH---HHHHHHHhc-CCCEE--EEEec
Confidence 589999998653221 356777543 67875 59997
No 17
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional
Probab=98.22 E-value=2.8e-05 Score=86.24 Aligned_cols=64 Identities=17% Similarity=0.286 Sum_probs=41.6
Q ss_pred eEEEEEEeccCCCCCCchhhHhhHHHHHHHHhCC-CCCCCCCCCCCCCCccccccceEEecccccccccChHHHHHHHHh
Q 011549 248 TSFCFVAAHLASGEKKGDEGRRNHQVSEIFKRTS-FPRSPNDDDNPHPLTILGHDQIFWFGDLNYRLYLEDNLARHLIKK 326 (483)
Q Consensus 248 t~~~FVn~HLaA~~~~~~~~rRn~d~~~I~~~~~-F~~~~~~~~~~~~~~i~~~d~vfw~GDLNYRI~~~~~~v~~li~~ 326 (483)
..||++|.||-.+....+ .|..+...|++.+. +... ..-.+|++|||| ..+.+.+-+++.+
T Consensus 417 ~~l~VaNTHL~~~p~~~d--vRl~Q~~~Ll~~l~~~~~~-------------~~~PvIlcGDFN---S~P~S~vy~lLt~ 478 (606)
T PLN03144 417 QLLCVANTHIHANQELKD--VKLWQVHTLLKGLEKIAAS-------------ADIPMLVCGDFN---SVPGSAPHCLLAT 478 (606)
T ss_pred cEEEEEEeeeccCCccch--hHHHHHHHHHHHHHHHhhc-------------CCCceEEeccCC---CCCCChhhhhhhc
Confidence 369999999977654332 35556555655431 1100 013689999999 7777888888877
Q ss_pred cCh
Q 011549 327 QDW 329 (483)
Q Consensus 327 ~~~ 329 (483)
|..
T Consensus 479 G~v 481 (606)
T PLN03144 479 GKV 481 (606)
T ss_pred CCc
Confidence 653
No 18
>PRK15251 cytolethal distending toxin subunit CdtB; Provisional
Probab=98.12 E-value=9e-05 Score=74.68 Aligned_cols=46 Identities=28% Similarity=0.382 Sum_probs=29.8
Q ss_pred EEEEEeeCCCCCCCCCc--hhchhhhcCCCCCCcEEEEEEEeeecCcccc
Q 011549 65 IFVGTWNVAGRSPVGSL--AVDLDEWLNLKDAADMYVLGFQEIVPLKART 112 (483)
Q Consensus 65 I~v~TWNV~g~~P~~~l--~~dL~~wL~~~~~~DIyVIGlQEiv~l~~~~ 112 (483)
.-|+|||+-|..-..+. ..++...+...+++||+ .|||+..+.+..
T Consensus 25 ~~~~twn~qg~s~~~~~kw~~~v~~l~~~~~~~DIl--a~QEags~p~~a 72 (271)
T PRK15251 25 YKVATWNLQGSSASTESKWNVNVRQLLSGENPADIL--MVQEAGSLPSSA 72 (271)
T ss_pred ceEEEeecCCCCCCChhhhhhhHHHHhcCCCCCCEE--EEEecCCCcccc
Confidence 35899999998543321 12355556555578875 579998766543
No 19
>smart00476 DNaseIc deoxyribonuclease I. Deoxyribonuclease I catalyzes the endonucleolytic cleavage of double-stranded DNA. The enzyme is secreted outside the cell and also involved in apoptosis in the nucleus.
Probab=98.10 E-value=0.00012 Score=74.15 Aligned_cols=23 Identities=26% Similarity=0.335 Sum_probs=18.3
Q ss_pred EEEEEEEEcCe---EEEEEEeccCCC
Q 011549 238 SVSVSMSIEGT---SFCFVAAHLASG 260 (483)
Q Consensus 238 aV~ir~~i~~t---~~~FVn~HLaA~ 260 (483)
...++|+...+ .|.+|++|+.+.
T Consensus 129 P~~~~F~~~~~~~~~F~li~~H~~p~ 154 (276)
T smart00476 129 PFVVKFSSPSTAVKEFVIVPLHTTPE 154 (276)
T ss_pred ceEEEEEeCCCCCccEEEEEecCChH
Confidence 45677877664 799999999886
No 20
>COG0708 XthA Exonuclease III [DNA replication, recombination, and repair]
Probab=97.91 E-value=5.8e-05 Score=75.63 Aligned_cols=34 Identities=32% Similarity=0.568 Sum_probs=23.9
Q ss_pred EEEEeeCCCCCCCCCchhchhhhcCCCCCCcEEEEEEEee
Q 011549 66 FVGTWNVAGRSPVGSLAVDLDEWLNLKDAADMYVLGFQEI 105 (483)
Q Consensus 66 ~v~TWNV~g~~P~~~l~~dL~~wL~~~~~~DIyVIGlQEi 105 (483)
-+.||||||-...-. -+.+||... .||| |||||+
T Consensus 2 kI~SwNVNgiRar~~---~~~~~l~~~-~pDV--lclQEt 35 (261)
T COG0708 2 KIASWNVNGLRARLK---KLLDWLEEE-QPDV--LCLQET 35 (261)
T ss_pred eeEEEehhhHHHHHH---HHHHHHHHh-CCCE--EEEEec
Confidence 378999999753211 267888643 4686 789998
No 21
>KOG2756 consensus Predicted Mg2+-dependent phosphodiesterase TTRAP [Signal transduction mechanisms]
Probab=96.94 E-value=0.008 Score=60.45 Aligned_cols=62 Identities=23% Similarity=0.397 Sum_probs=42.7
Q ss_pred EEEEEEEcCeEEEEEEeccCCCCCCchhhHhhHHHHHHHHhCCCCCCCCCCCCCCCCccccccceEEeccccccc
Q 011549 239 VSVSMSIEGTSFCFVAAHLASGEKKGDEGRRNHQVSEIFKRTSFPRSPNDDDNPHPLTILGHDQIFWFGDLNYRL 313 (483)
Q Consensus 239 V~ir~~i~~t~~~FVn~HLaA~~~~~~~~rRn~d~~~I~~~~~F~~~~~~~~~~~~~~i~~~d~vfw~GDLNYRI 313 (483)
..+-..+.+..+||.++||.+-.+.. .+|.+++...++++.--.. +.....|||-||+|.|=
T Consensus 195 ~I~Ev~v~G~Kl~l~tsHLEStr~h~--P~r~~qF~~~~~k~~EaIe-----------~lPnA~ViFGGD~NlrD 256 (349)
T KOG2756|consen 195 LIVEVNVSGNKLCLMTSHLESTRGHA--PERMNQFKMVLKKMQEAIE-----------SLPNATVIFGGDTNLRD 256 (349)
T ss_pred EEEEEeecCceEEEEeccccCCCCCC--hHHHHHHHHHHHHHHHHHH-----------hCCCceEEEcCcccchh
Confidence 35566788999999999999987653 4688888766654321000 11224789999999873
No 22
>KOG2338 consensus Transcriptional effector CCR4-related protein [Transcription]
Probab=95.39 E-value=0.084 Score=57.13 Aligned_cols=84 Identities=20% Similarity=0.201 Sum_probs=50.6
Q ss_pred eeeccccccCCceEEEEEEEEcCe---EEEEEEeccCCCCCCchhhHhhHHHHHHHHhCC-CCCCCCCCCCCCCCccccc
Q 011549 225 VACGIMGYLGNKGSVSVSMSIEGT---SFCFVAAHLASGEKKGDEGRRNHQVSEIFKRTS-FPRSPNDDDNPHPLTILGH 300 (483)
Q Consensus 225 v~tG~~g~~GNKGaV~ir~~i~~t---~~~FVn~HLaA~~~~~~~~rRn~d~~~I~~~~~-F~~~~~~~~~~~~~~i~~~ 300 (483)
...|+...-.=++.|+++|++-+. -++..|.||-=|...... |-.+...|+..+. |.... ..|
T Consensus 226 ~~~~l~n~~NV~lvv~l~f~~~~~~sq~ilVanTHLl~np~~~~v--rL~Q~~iiL~~~~~~~~~~-----------~~~ 292 (495)
T KOG2338|consen 226 SGSALANRDNVGLVVSLEFRLVDESSQGILVANTHLLFNPSRSDV--RLAQVYIILAELEKMSKSS-----------KSH 292 (495)
T ss_pred ccchhhcccceeEEEEEEecccCcccCceEEEeeeeeecCcccch--hhHHHHHHHHHHHHHHhhc-----------ccC
Confidence 334444322224566777766665 799999999999776654 5566666766541 11110 034
Q ss_pred cceEEecccccccccChHHHHHHH
Q 011549 301 DQIFWFGDLNYRLYLEDNLARHLI 324 (483)
Q Consensus 301 d~vfw~GDLNYRI~~~~~~v~~li 324 (483)
=.+|++|||| ..+.+.+-..|
T Consensus 293 ~pi~l~GDfN---t~p~~~~y~fl 313 (495)
T KOG2338|consen 293 WPIFLCGDFN---TEPDSPPYLFL 313 (495)
T ss_pred CCeEEecCCC---CCCCCCcchhh
Confidence 5899999999 55544443333
No 23
>KOG3873 consensus Sphingomyelinase family protein [Signal transduction mechanisms]
Probab=94.76 E-value=0.064 Score=56.06 Aligned_cols=101 Identities=20% Similarity=0.306 Sum_probs=59.9
Q ss_pred EeeeeeEEEEEEEecCccc----ccccccceeeeeeeccccccCCceEEEEEEEEcCeEEEEEEeccCCCCCCchh---h
Q 011549 195 SKKMVGVLISVWIRRELLR----KYCISNVKVCSVACGIMGYLGNKGSVSVSMSIEGTSFCFVAAHLASGEKKGDE---G 267 (483)
Q Consensus 195 s~qlvGi~l~Vfvr~~l~~----~~~I~~V~~~~v~tG~~g~~GNKGaV~ir~~i~~t~~~FVn~HLaA~~~~~~~---~ 267 (483)
|--| |-.|+||-|..+.. +|.+..-- ..+-. |.-.|-||--..++.+.+..+.+.|.||-|--.+.+. -
T Consensus 75 SGim-GaGL~vfSK~PI~~t~~~~y~lNG~p-~~i~r--GDWf~GK~Vgl~~l~~~g~~v~~yntHLHAeY~rq~D~YL~ 150 (422)
T KOG3873|consen 75 SGIM-GAGLCVFSKHPILETLFHRYSLNGYP-HAIHR--GDWFGGKGVGLTVLLVGGRMVNLYNTHLHAEYDRQNDEYLC 150 (422)
T ss_pred cccc-cCceEEeecCchhhhhhhccccCCcc-ceeee--ccccccceeEEEEEeeCCEEeeeeehhccccccccCchhhh
Confidence 4444 66789999887654 12221100 01111 2235778888888999999999999999987543221 2
Q ss_pred HhhHHHHHHHHhCCCCCCCCCCCCCCCCccccccceEEecccccc
Q 011549 268 RRNHQVSEIFKRTSFPRSPNDDDNPHPLTILGHDQIFWFGDLNYR 312 (483)
Q Consensus 268 rRn~d~~~I~~~~~F~~~~~~~~~~~~~~i~~~d~vfw~GDLNYR 312 (483)
.|-.+.-++.+-+. ......|.||.+||||-+
T Consensus 151 HR~~QAwdlaqfi~-------------~t~q~~~vVI~~GDLN~~ 182 (422)
T KOG3873|consen 151 HRVAQAWDLAQFIR-------------ATRQNADVVILAGDLNMQ 182 (422)
T ss_pred HHHHHHHHHHHHHH-------------HHhcCCcEEEEecCCCCC
Confidence 34444333322110 112346899999999954
No 24
>COG3021 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.71 E-value=0.15 Score=52.57 Aligned_cols=64 Identities=23% Similarity=0.286 Sum_probs=39.1
Q ss_pred CCceEEEEEEEE-cCeEEEEEEeccCCCCCCchhhHhhHHHHHHHHhCCCCCCCCCCCCCCCCccccc-cceEEeccccc
Q 011549 234 GNKGSVSVSMSI-EGTSFCFVAAHLASGEKKGDEGRRNHQVSEIFKRTSFPRSPNDDDNPHPLTILGH-DQIFWFGDLNY 311 (483)
Q Consensus 234 GNKGaV~ir~~i-~~t~~~FVn~HLaA~~~~~~~~rRn~d~~~I~~~~~F~~~~~~~~~~~~~~i~~~-d~vfw~GDLNY 311 (483)
+-||+.++.... +++.+..++.|..-..-..+ ..| .+..++...+. .| -.||+.||||
T Consensus 173 ~pk~~~~t~~~~~~g~~l~v~~lh~~~~~~~~~-~~~-~ql~~l~~~i~-----------------~~~gpvIlaGDfN- 232 (309)
T COG3021 173 LPKSALATAYPLPDGTELTVVALHAVNFPVGTD-PQR-AQLLELGDQIA-----------------GHSGPVILAGDFN- 232 (309)
T ss_pred CCccceeEEEEcCCCCEEEEEeeccccccCCcc-HHH-HHHHHHHHHHH-----------------cCCCCeEEeecCC-
Confidence 467887776664 57889999999875433322 233 44444443321 11 3689999999
Q ss_pred ccccChHH
Q 011549 312 RLYLEDNL 319 (483)
Q Consensus 312 RI~~~~~~ 319 (483)
..+-+.
T Consensus 233 --a~pWS~ 238 (309)
T COG3021 233 --APPWSR 238 (309)
T ss_pred --CcchhH
Confidence 544443
No 25
>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B.
Probab=93.78 E-value=0.085 Score=45.02 Aligned_cols=33 Identities=24% Similarity=0.191 Sum_probs=16.7
Q ss_pred cccccceeeeccCeeE-EeeccCCCCCCCccccc
Q 011549 387 PAWCDRILWYGKGVKQ-LSYFRSESRFSDHRPVS 419 (483)
Q Consensus 387 PSWcDRIL~~~~~i~~-l~Y~s~~~~~SDHkPV~ 419 (483)
.+--|+||........ ..-.......|||+||.
T Consensus 86 ~s~iD~~~~s~~~~~~~~~~~~~~~~~SDH~~I~ 119 (119)
T PF14529_consen 86 GSRIDLILTSDNLLSWCVWVISSDDSGSDHCPIT 119 (119)
T ss_dssp EE--EEEEEECCGCCCEEEEEETTSSSSSB--EE
T ss_pred CceEEEEEECChHHhcCcEEEeCCCCCCCccCCC
Confidence 5668999986543222 11112245889999984
No 26
>KOG3870 consensus Uncharacterized conserved protein [Function unknown]
Probab=38.74 E-value=12 Score=39.99 Aligned_cols=18 Identities=33% Similarity=0.606 Sum_probs=14.9
Q ss_pred cccccceEEecccccccc
Q 011549 297 ILGHDQIFWFGDLNYRLY 314 (483)
Q Consensus 297 i~~~d~vfw~GDLNYRI~ 314 (483)
+..++.|||=||||||=-
T Consensus 349 L~~S~LvIFKGDLNYRKL 366 (434)
T KOG3870|consen 349 LQKSSLVIFKGDLNYRKL 366 (434)
T ss_pred HhhCcEEEEeccccHHHH
Confidence 456799999999999943
No 27
>COG0217 Uncharacterized conserved protein [Function unknown]
Probab=27.88 E-value=66 Score=32.32 Aligned_cols=65 Identities=28% Similarity=0.327 Sum_probs=48.0
Q ss_pred CCCEEEEEEeee--eeEEEEEEEecCcccccccccceeeeeeeccccccCCceEEEEEEEEcCeEEEEEEec
Q 011549 187 GSKYKLMASKKM--VGVLISVWIRRELLRKYCISNVKVCSVACGIMGYLGNKGSVSVSMSIEGTSFCFVAAH 256 (483)
Q Consensus 187 ~~~Y~~V~s~ql--vGi~l~Vfvr~~l~~~~~I~~V~~~~v~tG~~g~~GNKGaV~ir~~i~~t~~~FVn~H 256 (483)
+..|..+...-. .|+.|+|.+-.+-..+ -+++|+.+..++| |.+|.-|+|+.-| ...-++.+.-.
T Consensus 79 ~~~~~ei~YEGygP~GvaiiVe~LTDN~NR-Tas~vR~~F~K~G--G~lg~~GSV~~mF--~~kGvi~~~~~ 145 (241)
T COG0217 79 GANYEEIRYEGYGPGGVAIIVEALTDNRNR-TASNVRSAFNKNG--GNLGEPGSVSYMF--DRKGVIVVEKN 145 (241)
T ss_pred ccceEEEEEEeECCCceEEEEEeccCCcch-hHHHHHHHHHhcC--CccCCCceEEEEE--eccEEEEECCC
Confidence 357888877776 5999999999887664 6889998888876 7789999876554 44445554433
Done!