Query 011558
Match_columns 483
No_of_seqs 557 out of 4072
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 10:38:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011558.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011558hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t4n_C Nuclear protein SNF4; C 100.0 4.2E-40 1.4E-44 327.1 29.7 307 139-482 14-320 (323)
2 2qrd_G Protein C1556.08C; AMPK 100.0 3.1E-34 1.1E-38 286.1 31.8 306 139-482 6-315 (334)
3 2v8q_E 5'-AMP-activated protei 100.0 4.1E-34 1.4E-38 284.8 24.9 300 143-482 23-323 (330)
4 3kh5_A Protein MJ1225; AMPK, A 100.0 9.7E-32 3.3E-36 260.7 18.9 269 156-480 4-279 (280)
5 3ddj_A CBS domain-containing p 100.0 5.9E-31 2E-35 257.9 18.8 264 154-482 19-285 (296)
6 2yzq_A Putative uncharacterize 100.0 8.3E-29 2.8E-33 240.6 14.3 263 157-482 3-279 (282)
7 1z0n_A 5'-AMP-activated protei 99.9 2.7E-24 9.2E-29 172.8 11.1 86 16-106 6-91 (96)
8 2qlv_B Protein SIP2, protein S 99.9 7.7E-24 2.6E-28 199.1 11.1 88 19-107 2-89 (252)
9 3kh5_A Protein MJ1225; AMPK, A 99.9 8.3E-23 2.8E-27 197.7 18.7 195 256-481 9-204 (280)
10 3ddj_A CBS domain-containing p 99.9 3.2E-22 1.1E-26 195.7 14.9 189 256-481 25-213 (296)
11 3nme_A Ptpkis1 protein, SEX4 g 99.9 2.6E-22 8.7E-27 195.3 12.1 121 17-154 166-288 (294)
12 3t4n_C Nuclear protein SNF4; C 99.9 7.9E-21 2.7E-25 188.1 16.5 201 257-482 38-248 (323)
13 2v8q_E 5'-AMP-activated protei 99.8 1.3E-20 4.4E-25 187.2 14.8 203 258-481 44-250 (330)
14 2yzq_A Putative uncharacterize 99.8 2.4E-20 8.1E-25 180.7 11.7 172 257-477 7-179 (282)
15 2qrd_G Protein C1556.08C; AMPK 99.8 9.6E-20 3.3E-24 181.1 15.8 205 258-481 31-242 (334)
16 4esy_A CBS domain containing m 99.8 4.9E-20 1.7E-24 165.2 8.9 137 342-482 19-162 (170)
17 3lv9_A Putative transporter; C 99.8 4.5E-18 1.5E-22 148.5 13.9 119 342-482 24-145 (148)
18 3k6e_A CBS domain protein; str 99.8 2.1E-18 7.2E-23 152.3 10.5 122 344-481 18-141 (156)
19 3i8n_A Uncharacterized protein 99.8 5.5E-18 1.9E-22 144.7 12.6 120 342-482 7-129 (130)
20 3hf7_A Uncharacterized CBS-dom 99.7 7.2E-18 2.5E-22 144.1 12.2 122 342-482 3-127 (130)
21 3kpb_A Uncharacterized protein 99.7 6.7E-18 2.3E-22 142.1 11.8 119 342-482 2-120 (122)
22 3nqr_A Magnesium and cobalt ef 99.7 3.6E-18 1.2E-22 145.2 9.7 120 342-482 4-126 (127)
23 3lhh_A CBS domain protein; str 99.7 2.4E-17 8.3E-22 147.9 14.2 119 342-482 43-164 (172)
24 3jtf_A Magnesium and cobalt ef 99.7 9.6E-18 3.3E-22 143.0 10.3 118 342-482 6-126 (129)
25 2rih_A Conserved protein with 99.7 1.8E-17 6.2E-22 143.4 12.0 123 339-481 3-127 (141)
26 1pbj_A Hypothetical protein; s 99.7 3.7E-17 1.3E-21 138.0 13.4 121 342-482 2-122 (125)
27 2p9m_A Hypothetical protein MJ 99.7 6.9E-17 2.4E-21 139.0 14.0 122 342-482 9-136 (138)
28 3lfr_A Putative metal ION tran 99.7 7.7E-18 2.6E-22 145.0 8.0 121 342-482 4-127 (136)
29 3oco_A Hemolysin-like protein 99.7 2E-17 6.8E-22 145.4 10.6 119 342-482 21-143 (153)
30 4gqw_A CBS domain-containing p 99.7 3.4E-17 1.2E-21 143.0 11.3 127 342-482 6-143 (152)
31 2yzi_A Hypothetical protein PH 99.7 8.7E-17 3E-21 138.4 13.6 121 342-482 8-129 (138)
32 2o16_A Acetoin utilization pro 99.7 7.7E-17 2.6E-21 142.8 13.5 125 342-481 6-134 (160)
33 2ef7_A Hypothetical protein ST 99.7 6.6E-17 2.2E-21 138.2 12.6 120 342-481 5-124 (133)
34 3gby_A Uncharacterized protein 99.7 1.8E-17 6.3E-22 140.9 8.8 121 342-482 6-126 (128)
35 3fhm_A Uncharacterized protein 99.7 4.6E-17 1.6E-21 144.9 11.3 123 342-482 25-150 (165)
36 3fv6_A YQZB protein; CBS domai 99.7 7.8E-17 2.7E-21 142.5 12.7 122 342-482 18-144 (159)
37 2uv4_A 5'-AMP-activated protei 99.7 7.2E-17 2.5E-21 141.6 12.1 123 349-482 29-151 (152)
38 3ctu_A CBS domain protein; str 99.7 3.6E-17 1.2E-21 144.1 10.0 125 342-482 16-142 (156)
39 3k2v_A Putative D-arabinose 5- 99.7 6.9E-17 2.3E-21 141.2 11.7 118 342-478 29-148 (149)
40 1y5h_A Hypothetical protein RV 99.7 2.9E-17 9.8E-22 140.5 9.0 122 342-482 9-131 (133)
41 2nyc_A Nuclear protein SNF4; b 99.7 1.1E-16 3.7E-21 138.6 12.7 126 346-482 16-141 (144)
42 3lqn_A CBS domain protein; csg 99.7 7.3E-17 2.5E-21 141.0 10.8 125 342-482 16-143 (150)
43 2pfi_A Chloride channel protei 99.7 2E-16 7E-21 140.1 13.3 132 342-482 14-147 (164)
44 1pvm_A Conserved hypothetical 99.7 1.6E-16 5.6E-21 144.0 12.5 124 341-481 9-132 (184)
45 3sl7_A CBS domain-containing p 99.7 5.4E-17 1.9E-21 146.1 9.0 138 342-482 5-156 (180)
46 2rc3_A CBS domain; in SITU pro 99.7 2E-16 6.9E-21 135.6 11.8 121 342-482 7-131 (135)
47 1o50_A CBS domain-containing p 99.7 3.4E-16 1.2E-20 138.0 13.4 125 342-482 17-153 (157)
48 2emq_A Hypothetical conserved 99.7 3E-16 1E-20 138.1 12.6 125 342-482 12-139 (157)
49 3ocm_A Putative membrane prote 99.7 3.3E-16 1.1E-20 140.6 12.6 118 342-482 37-157 (173)
50 1yav_A Hypothetical protein BS 99.7 2.6E-16 8.9E-21 139.0 11.7 124 342-481 15-141 (159)
51 4fry_A Putative signal-transdu 99.7 3.7E-16 1.3E-20 137.7 11.9 123 341-482 7-135 (157)
52 3kxr_A Magnesium transporter, 99.7 6E-16 2.1E-20 142.8 13.1 116 342-481 55-173 (205)
53 4esy_A CBS domain containing m 99.6 1.4E-16 4.9E-21 142.5 7.5 156 142-315 5-162 (170)
54 3oi8_A Uncharacterized protein 99.6 3E-16 1E-20 138.3 9.2 114 342-477 39-155 (156)
55 3l2b_A Probable manganase-depe 99.6 1.7E-15 5.7E-20 143.8 14.9 197 256-480 12-242 (245)
56 1vr9_A CBS domain protein/ACT 99.6 7.8E-16 2.7E-20 143.0 11.0 120 338-481 10-129 (213)
57 2j9l_A Chloride channel protei 99.6 1.1E-15 3.7E-20 138.3 11.4 138 342-481 12-164 (185)
58 1vr9_A CBS domain protein/ACT 99.6 1.5E-15 5.1E-20 141.1 12.0 154 256-461 18-171 (213)
59 2d4z_A Chloride channel protei 99.6 5.1E-15 1.7E-19 140.3 15.5 139 341-482 13-246 (250)
60 3k6e_A CBS domain protein; str 99.6 7.5E-16 2.6E-20 135.9 9.1 119 257-398 23-141 (156)
61 3lv9_A Putative transporter; C 99.6 4.8E-15 1.6E-19 129.2 12.5 115 256-398 28-144 (148)
62 3kxr_A Magnesium transporter, 99.6 8.9E-15 3E-19 135.0 13.8 122 248-400 51-175 (205)
63 3lhh_A CBS domain protein; str 99.6 1.1E-14 3.8E-19 130.4 13.6 117 255-399 46-164 (172)
64 3kpb_A Uncharacterized protein 99.6 9.2E-15 3.2E-19 122.7 11.6 114 256-398 6-119 (122)
65 3i8n_A Uncharacterized protein 99.6 1.2E-14 4.2E-19 123.7 11.8 116 256-398 11-128 (130)
66 2oux_A Magnesium transporter; 99.6 5.4E-15 1.9E-19 143.6 10.7 117 341-481 137-258 (286)
67 2yvy_A MGTE, Mg2+ transporter 99.6 1.2E-14 4E-19 140.8 11.4 117 342-482 136-257 (278)
68 3hf7_A Uncharacterized CBS-dom 99.6 1.6E-14 5.6E-19 123.1 11.0 115 259-398 12-126 (130)
69 3gby_A Uncharacterized protein 99.6 7.3E-15 2.5E-19 124.7 8.7 116 256-398 10-125 (128)
70 3nqr_A Magnesium and cobalt ef 99.6 1.1E-14 3.9E-19 123.4 9.8 111 260-397 14-124 (127)
71 3lfr_A Putative metal ION tran 99.6 1.2E-14 4.1E-19 124.9 10.0 114 259-398 13-126 (136)
72 3jtf_A Magnesium and cobalt ef 99.6 2.9E-14 9.8E-19 121.3 12.2 111 259-398 15-125 (129)
73 2ef7_A Hypothetical protein ST 99.6 2.5E-14 8.5E-19 122.1 11.7 116 256-398 9-124 (133)
74 1pbj_A Hypothetical protein; s 99.5 3.5E-14 1.2E-18 119.6 11.8 116 257-399 7-122 (125)
75 3oco_A Hemolysin-like protein 99.5 2E-14 6.7E-19 126.1 10.3 112 260-399 31-143 (153)
76 2rih_A Conserved protein with 99.5 4.2E-14 1.4E-18 122.1 11.8 117 256-397 10-126 (141)
77 2o16_A Acetoin utilization pro 99.5 3.3E-14 1.1E-18 125.7 11.3 125 256-398 10-134 (160)
78 3fhm_A Uncharacterized protein 99.5 5.9E-14 2E-18 124.6 12.9 116 259-399 35-150 (165)
79 2p9m_A Hypothetical protein MJ 99.5 3E-14 1E-18 122.3 10.6 117 256-398 13-135 (138)
80 4aee_A Alpha amylase, catalyti 99.5 1.2E-14 4E-19 158.1 9.2 82 16-100 13-102 (696)
81 2yzi_A Hypothetical protein PH 99.5 8.1E-14 2.8E-18 119.6 12.5 119 256-400 12-130 (138)
82 3l2b_A Probable manganase-depe 99.5 1.7E-13 6E-18 129.8 16.0 212 155-397 7-242 (245)
83 3fv6_A YQZB protein; CBS domai 99.5 4.2E-14 1.5E-18 124.8 10.8 117 256-398 22-143 (159)
84 3lqn_A CBS domain protein; csg 99.5 7.2E-14 2.5E-18 121.8 11.9 119 259-399 25-143 (150)
85 4gqw_A CBS domain-containing p 99.5 1.5E-14 5E-19 126.1 7.4 131 256-398 10-142 (152)
86 3oi8_A Uncharacterized protein 99.5 1E-13 3.5E-18 122.0 12.6 111 256-394 43-155 (156)
87 1o50_A CBS domain-containing p 99.5 1.7E-13 5.9E-18 120.5 13.8 132 256-399 21-153 (157)
88 2rc3_A CBS domain; in SITU pro 99.5 1.9E-13 6.6E-18 116.8 13.3 114 259-398 17-130 (135)
89 2nyc_A Nuclear protein SNF4; b 99.5 7.9E-14 2.7E-18 120.4 10.9 119 256-398 16-140 (144)
90 2uv4_A 5'-AMP-activated protei 99.5 1.1E-13 3.9E-18 121.0 12.0 116 259-398 29-150 (152)
91 3ocm_A Putative membrane prote 99.5 1.3E-13 4.5E-18 123.6 12.7 118 254-400 39-158 (173)
92 3k2v_A Putative D-arabinose 5- 99.5 5.3E-14 1.8E-18 122.7 9.9 114 256-395 33-148 (149)
93 3pc3_A CG1753, isoform A; CBS, 99.5 6.4E-14 2.2E-18 147.6 11.9 123 341-482 384-511 (527)
94 1pvm_A Conserved hypothetical 99.5 1E-13 3.6E-18 125.4 11.7 119 256-398 14-132 (184)
95 2emq_A Hypothetical conserved 99.5 1.8E-13 6.2E-18 120.1 12.3 122 256-399 16-139 (157)
96 1y5h_A Hypothetical protein RV 99.5 4.9E-14 1.7E-18 120.2 8.1 115 257-397 14-129 (133)
97 3ctu_A CBS domain protein; str 99.5 5.7E-14 2E-18 123.4 7.7 118 259-399 25-142 (156)
98 3sl7_A CBS domain-containing p 99.5 1E-13 3.4E-18 124.6 9.1 133 260-398 15-155 (180)
99 4fry_A Putative signal-transdu 99.5 2.6E-13 9E-18 119.2 11.5 116 259-400 21-136 (157)
100 2pfi_A Chloride channel protei 99.5 2.6E-13 8.8E-18 119.9 11.1 122 257-398 19-146 (164)
101 2zy9_A Mg2+ transporter MGTE; 99.4 2E-13 6.9E-18 141.5 11.3 116 342-481 156-276 (473)
102 1yav_A Hypothetical protein BS 99.4 1.7E-13 5.7E-18 120.8 8.8 118 260-399 25-142 (159)
103 2yvy_A MGTE, Mg2+ transporter 99.4 6.8E-13 2.3E-17 128.3 13.5 121 248-399 132-257 (278)
104 2d4z_A Chloride channel protei 99.4 7E-13 2.4E-17 125.6 13.2 139 255-398 17-245 (250)
105 3org_A CMCLC; transporter, tra 99.4 4.5E-14 1.5E-18 151.7 4.6 139 341-481 453-624 (632)
106 2oux_A Magnesium transporter; 99.4 6.9E-13 2.4E-17 128.7 11.9 121 248-399 134-259 (286)
107 2j9l_A Chloride channel protei 99.4 9E-13 3.1E-17 118.9 11.8 133 261-398 25-164 (185)
108 2zy9_A Mg2+ transporter MGTE; 99.4 2.3E-12 7.7E-17 133.6 14.8 121 248-399 152-277 (473)
109 3usb_A Inosine-5'-monophosphat 99.4 1.5E-12 5.1E-17 135.9 13.2 115 344-481 116-233 (511)
110 1zfj_A Inosine monophosphate d 99.3 5.3E-12 1.8E-16 131.9 12.6 115 344-481 93-210 (491)
111 4fxs_A Inosine-5'-monophosphat 99.3 9.4E-13 3.2E-17 136.9 3.9 114 344-480 92-207 (496)
112 1me8_A Inosine-5'-monophosphat 99.3 4.1E-13 1.4E-17 140.2 0.1 113 347-481 103-220 (503)
113 3pc3_A CG1753, isoform A; CBS, 99.3 8.1E-12 2.8E-16 131.5 9.4 120 255-400 388-512 (527)
114 1vrd_A Inosine-5'-monophosphat 99.3 5E-13 1.7E-17 139.7 0.2 116 343-481 97-214 (494)
115 3usb_A Inosine-5'-monophosphat 99.3 6E-11 2E-15 123.7 15.5 115 257-399 119-234 (511)
116 4avf_A Inosine-5'-monophosphat 99.2 7.2E-13 2.5E-17 137.6 0.1 114 343-480 90-205 (490)
117 1me8_A Inosine-5'-monophosphat 99.2 1.4E-12 4.8E-17 136.1 -0.4 156 257-459 103-260 (503)
118 4af0_A Inosine-5'-monophosphat 99.2 3.1E-12 1.1E-16 130.1 0.0 109 347-479 144-255 (556)
119 3org_A CMCLC; transporter, tra 99.1 3E-11 1E-15 129.7 7.1 134 256-396 458-622 (632)
120 4af0_A Inosine-5'-monophosphat 99.1 1.4E-11 4.8E-16 125.3 2.5 112 258-397 145-256 (556)
121 1zfj_A Inosine monophosphate d 99.1 6E-10 2.1E-14 116.3 14.5 115 256-398 95-210 (491)
122 4fxs_A Inosine-5'-monophosphat 99.1 5.1E-11 1.8E-15 123.8 5.0 113 256-398 94-208 (496)
123 4aef_A Neopullulanase (alpha-a 99.1 3.1E-10 1E-14 122.5 10.0 77 20-99 16-97 (645)
124 1jcn_A Inosine monophosphate d 99.1 1.8E-12 6.1E-17 136.1 -7.4 117 343-480 110-231 (514)
125 2cu0_A Inosine-5'-monophosphat 99.0 2.6E-11 8.8E-16 126.2 0.2 110 345-480 97-206 (486)
126 4avf_A Inosine-5'-monophosphat 99.0 8E-11 2.7E-15 122.2 3.7 112 256-398 93-206 (490)
127 1vrd_A Inosine-5'-monophosphat 99.0 8.9E-11 3E-15 122.6 3.3 114 256-399 100-215 (494)
128 2cu0_A Inosine-5'-monophosphat 98.8 4.2E-10 1.4E-14 117.1 0.9 109 257-398 99-207 (486)
129 3ghd_A A cystathionine beta-sy 98.8 9.5E-09 3.3E-13 77.0 6.5 46 351-397 2-47 (70)
130 1jcn_A Inosine monophosphate d 98.7 2.5E-10 8.5E-15 119.7 -4.5 117 256-397 113-231 (514)
131 3ghd_A A cystathionine beta-sy 98.7 1.6E-08 5.6E-13 75.7 6.8 47 261-314 2-48 (70)
132 2z0b_A GDE5, KIAA1434, putativ 98.5 1.7E-07 5.9E-12 79.1 7.7 58 19-76 7-75 (131)
133 3fio_A A cystathionine beta-sy 98.5 1.7E-07 5.9E-12 69.7 6.5 47 351-398 2-48 (70)
134 3fio_A A cystathionine beta-sy 98.5 3.5E-07 1.2E-11 68.0 7.4 47 433-481 2-48 (70)
135 1ac0_A Glucoamylase; hydrolase 97.9 5.8E-06 2E-10 67.3 4.1 60 18-77 4-74 (108)
136 3c8d_A Enterochelin esterase; 97.9 6E-05 2.1E-09 76.2 11.2 85 19-106 29-152 (403)
137 1m7x_A 1,4-alpha-glucan branch 97.3 0.00054 1.9E-08 73.1 9.5 67 22-90 26-100 (617)
138 3aml_A OS06G0726400 protein; s 97.1 0.00066 2.2E-08 73.9 6.9 62 23-87 67-142 (755)
139 3k1d_A 1,4-alpha-glucan-branch 97.0 0.00099 3.4E-08 71.9 7.4 67 22-90 137-211 (722)
140 2laa_A Beta/alpha-amylase; SBD 96.4 0.0074 2.5E-07 48.0 6.9 64 21-86 5-75 (104)
141 1qho_A Alpha-amylase; glycosid 96.4 0.0047 1.6E-07 66.7 7.6 58 17-76 578-653 (686)
142 2vn4_A Glucoamylase; hydrolase 96.0 0.031 1.1E-06 59.0 11.4 59 18-76 494-563 (599)
143 1cyg_A Cyclodextrin glucanotra 95.8 0.018 6E-07 62.1 8.2 57 18-76 577-647 (680)
144 1wzl_A Alpha-amylase II; pullu 95.7 0.0095 3.3E-07 63.0 5.7 61 17-77 19-87 (585)
145 3vgf_A Malto-oligosyltrehalose 95.5 0.008 2.7E-07 63.2 4.0 61 23-89 11-74 (558)
146 2bhu_A Maltooligosyltrehalose 95.4 0.012 4.2E-07 62.3 5.2 62 22-90 35-97 (602)
147 3bmv_A Cyclomaltodextrin gluca 95.4 0.026 9E-07 60.8 7.8 57 18-76 581-651 (683)
148 1bf2_A Isoamylase; hydrolase, 95.2 0.0082 2.8E-07 65.4 3.0 55 23-80 18-85 (750)
149 1d3c_A Cyclodextrin glycosyltr 95.1 0.035 1.2E-06 59.9 7.6 57 18-76 584-654 (686)
150 1j0h_A Neopullulanase; beta-al 95.0 0.013 4.4E-07 62.0 4.0 61 17-77 19-89 (588)
151 1vem_A Beta-amylase; beta-alph 94.9 0.035 1.2E-06 57.4 6.7 59 17-76 416-485 (516)
152 2wsk_A Glycogen debranching en 94.8 0.027 9.4E-07 60.3 5.7 53 23-79 21-77 (657)
153 2vr5_A Glycogen operon protein 94.5 0.04 1.4E-06 59.7 6.1 55 22-80 30-91 (718)
154 2fhf_A Pullulanase; multiple d 93.1 0.087 3E-06 59.3 5.8 66 23-90 306-385 (1083)
155 2e8y_A AMYX protein, pullulana 92.9 0.091 3.1E-06 56.9 5.4 64 23-89 115-185 (718)
156 4aio_A Limit dextrinase; hydro 92.7 0.067 2.3E-06 59.3 4.2 53 23-78 138-194 (884)
157 2ya0_A Putative alkaline amylo 92.2 0.16 5.6E-06 54.8 6.3 65 23-89 26-106 (714)
158 1ea9_C Cyclomaltodextrinase; h 92.0 0.028 9.7E-07 59.3 0.0 61 17-77 19-86 (583)
159 1gcy_A Glucan 1,4-alpha-maltot 92.0 0.029 9.8E-07 58.5 0.0 57 18-76 428-495 (527)
160 2wan_A Pullulanase; hydrolase, 91.8 0.26 8.9E-06 54.8 7.4 61 19-81 151-221 (921)
161 3m07_A Putative alpha amylase; 90.3 0.27 9.3E-06 52.1 5.5 62 23-91 44-108 (618)
162 3faw_A Reticulocyte binding pr 90.2 0.12 4.2E-06 56.9 2.8 65 23-89 146-224 (877)
163 4fch_A Outer membrane protein 89.8 0.35 1.2E-05 44.1 5.1 51 31-82 12-64 (221)
164 2wan_A Pullulanase; hydrolase, 89.6 0.25 8.4E-06 55.0 4.6 62 23-88 327-398 (921)
165 1ji1_A Alpha-amylase I; beta/a 88.6 0.35 1.2E-05 51.5 4.9 50 28-78 42-96 (637)
166 2c3v_A Alpha-amylase G-6; carb 87.0 1.3 4.3E-05 34.9 5.9 61 22-84 11-78 (102)
167 2ya1_A Putative alkaline amylo 84.3 0.83 2.9E-05 51.2 5.1 63 23-87 333-411 (1014)
168 4fe9_A Outer membrane protein 65.9 6 0.00021 40.1 5.2 48 31-79 150-199 (470)
169 2eef_A Protein phosphatase 1, 59.0 11 0.00038 32.0 4.6 49 31-79 60-122 (156)
170 4fe9_A Outer membrane protein 56.5 10 0.00035 38.3 4.9 53 31-84 260-319 (470)
171 2djm_A Glucoamylase A; beta sa 54.2 40 0.0014 26.4 6.8 54 31-84 33-98 (106)
172 4fem_A Outer membrane protein 54.0 14 0.00047 35.9 5.2 51 31-82 149-201 (358)
173 4dny_A Metalloprotease STCE; m 49.9 16 0.00054 29.6 3.9 24 62-86 99-123 (126)
174 4fch_A Outer membrane protein 46.0 8.8 0.0003 34.5 2.1 49 32-80 117-169 (221)
175 2jnz_A PHL P 3 allergen; timot 45.1 37 0.0013 26.8 5.3 61 17-83 24-90 (108)
176 1mhx_A Immunoglobulin-binding 39.5 12 0.00042 25.3 1.4 13 76-88 48-60 (65)
177 1tif_A IF3-N, translation init 38.0 54 0.0018 24.1 4.9 28 372-399 13-40 (78)
178 1tif_A IF3-N, translation init 36.5 49 0.0017 24.3 4.5 26 454-480 13-38 (78)
179 3ft1_A PHL P 3 allergen; beta- 35.4 94 0.0032 24.0 6.2 60 18-83 14-79 (100)
180 1svj_A Potassium-transporting 33.8 18 0.0006 30.6 2.0 35 442-478 121-155 (156)
181 2fqm_A Phosphoprotein, P prote 32.9 20 0.00067 25.5 1.7 27 38-68 1-27 (75)
182 2bem_A CBP21; chitin-binding p 31.9 82 0.0028 26.9 5.9 60 22-84 76-155 (170)
183 1igd_A Protein G; immunoglobul 31.5 20 0.00069 24.4 1.5 13 76-88 44-56 (61)
184 4a02_A EFCBM33A, CBM33, chitin 31.3 1.4E+02 0.0047 25.4 7.2 61 22-85 75-153 (166)
185 3fil_A Immunoglobulin G-bindin 31.2 13 0.00045 24.6 0.5 12 76-87 39-50 (56)
186 2w87_A Esterase D, XYL-CBM35; 26.5 45 0.0015 27.3 3.2 19 60-78 98-116 (139)
187 2vzp_A Aocbm35, EXO-beta-D-glu 26.0 47 0.0016 26.5 3.2 18 60-77 97-114 (127)
188 2w3j_A Carbohydrate binding mo 25.9 38 0.0013 28.0 2.7 20 59-78 95-114 (145)
189 4aee_A Alpha amylase, catalyti 25.8 44 0.0015 35.5 3.8 58 18-78 131-188 (696)
190 3k2t_A LMO2511 protein; lister 25.6 99 0.0034 21.2 4.2 32 437-468 10-41 (57)
191 1uy4_A Endo-1,4-beta-xylanase 25.1 38 0.0013 28.1 2.5 22 59-80 113-134 (145)
192 4gln_D D-RFX001; heterochiral 25.1 28 0.00096 23.2 1.3 16 73-88 35-51 (56)
193 2rpv_A Immunoglobulin G-bindin 24.3 31 0.0011 24.3 1.4 13 76-88 58-70 (75)
194 4aef_A Neopullulanase (alpha-a 24.1 68 0.0023 33.7 4.9 52 19-76 123-178 (645)
195 2w47_A Lipolytic enzyme, G-D-S 23.9 44 0.0015 27.4 2.7 19 60-78 98-116 (144)
196 1uxx_X Xylanase U; carbohydrat 21.8 25 0.00084 28.7 0.7 20 61-80 100-119 (133)
197 1uxz_A Cellulase B; carbohydra 20.8 26 0.00088 28.5 0.6 18 60-77 99-116 (131)
198 1pgx_A Protein G; immunoglobul 20.3 33 0.0011 24.7 1.0 13 76-88 52-64 (83)
199 3lyv_A Ribosome-associated fac 20.2 1.7E+02 0.0057 20.7 4.6 31 438-468 12-42 (66)
200 3ka5_A Ribosome-associated pro 20.1 1.6E+02 0.0055 20.7 4.5 31 438-468 11-41 (65)
No 1
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=100.00 E-value=4.2e-40 Score=327.12 Aligned_cols=307 Identities=25% Similarity=0.449 Sum_probs=245.2
Q ss_pred HHHHHHHHHHHHhhccccccccCCCCccEEEEccCcCHHHHHHHHHHcCCCeeeceeCCCCceeEEeeHHHHHHHHHHhc
Q 011558 139 ADLQLSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELG 218 (483)
Q Consensus 139 ~~~~~~~~~~~~fl~~~~~~d~~p~s~kvi~l~~~~~v~~A~~~l~e~~i~s~PV~d~~~~~~vGilt~~D~i~il~~~~ 218 (483)
.+.....+++.+||+.++|||+||.+.++++++.+.|+.+|++.|.+++++++||||++.++++|++|..|++.++.+++
T Consensus 14 ~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~~~~ 93 (323)
T 3t4n_C 14 IEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYYF 93 (323)
T ss_dssp HHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHHHHH
Confidence 44466789999999999999999999999999999999999999999999999999988888999999999999887665
Q ss_pred cCCCCCCHHHHhhccHHHHHHHHhhhhccccCCCCCCCCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcc
Q 011558 219 TNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQ 298 (483)
Q Consensus 219 ~~~~~l~~~~l~~~~i~~~~~~~~~~~~~~~~d~~g~~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~ 298 (483)
..+.. .+.++.+....+++.....+ .+.++++++.+++++.+|++.|.+++++++||++++...+ ..
T Consensus 94 ~~~~~--~~~l~~~~~~~v~~i~~~~~----------~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~-~~ 160 (323)
T 3t4n_C 94 SNPDK--FELVDKLQLDGLKDIERALG----------VDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETH-RE 160 (323)
T ss_dssp HCGGG--GGGGGGCBHHHHHHHHHHTT----------C----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTC-CE
T ss_pred cCcch--hHHHHHHHHHHHHHHHHHhC----------CCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCC-cc
Confidence 43322 23555666666766554332 4678899999999999999999999999999997632222 11
Q ss_pred eEEEEechhhHHHHHHhhccCCCCCCcccccccccccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEE
Q 011558 299 EILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIV 378 (483)
Q Consensus 299 ~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVv 378 (483)
+++|++|.+||++++..+... ......+++++.++ |.+++.++.+++++.+|+++|.+++++++||+
T Consensus 161 ~l~Givt~~di~~~l~~~~~~----~~~~~~~v~~~~~~---------m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVv 227 (323)
T 3t4n_C 161 IVVSVLTQYRILKFVALNCRE----THFLKIPIGDLNII---------TQDNMKSCQMTTPVIDVIQMLTQGRVSSVPII 227 (323)
T ss_dssp EEEEEEEHHHHHHHHHHHCGG----GGGCCSBGGGTTCS---------BCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEE
T ss_pred ceEEEecHHHHHHHHHhcCCc----hhhhhCcHHHcCCC---------CCCCcEEECCCCcHHHHHHHHHHcCCCEEEEE
Confidence 399999999999998765432 12223344433211 67789999999999999999999999999999
Q ss_pred cCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEE
Q 011558 379 DDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLV 458 (483)
Q Consensus 379 d~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~ 458 (483)
|++|+++|++|.+|+++++..+.+... +.++.+++..... ...++++|.+++++.+|+++|.+++++++|
T Consensus 228 d~~~~~~Giit~~dl~~~~~~~~~~~~---~~~v~~~m~~~~~-------~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~ 297 (323)
T 3t4n_C 228 DENGYLINVYEAYDVLGLIKGGIYNDL---SLSVGEALMRRSD-------DFEGVYTCTKNDKLSTIMDNIRKARVHRFF 297 (323)
T ss_dssp CTTCBEEEEEETTHHHHHHHTTHHHHT---TSBHHHHGGGSCT-------TCCCCEEECTTCBHHHHHHHHHHSCCCEEE
T ss_pred CCCCeEEEEEeHHHHHHHHhhchhhhc---cCCHHHHHhhccc-------cCCCCEEECCCCCHHHHHHHHHHhCCCEEE
Confidence 999999999999999997765543322 3678885543110 002688999999999999999999999999
Q ss_pred EEeCCCCeEEEEEehHHHHHHHhc
Q 011558 459 IVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 459 VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
||| ++|+++|+||.+||++++++
T Consensus 298 Vvd-~~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 298 VVD-DVGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp EEC-TTSBEEEEEEHHHHHHHHHH
T ss_pred EEC-CCCcEEEEEEHHHHHHHHHh
Confidence 999 57999999999999999975
No 2
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=100.00 E-value=3.1e-34 Score=286.10 Aligned_cols=306 Identities=22% Similarity=0.441 Sum_probs=236.6
Q ss_pred HHHHHHHHHHHHhhccccccccCCCCccEEEEccCcCHHHHHHHHHHcCCCeeeceeCCCCceeEEeeHHHHHHHHHHhc
Q 011558 139 ADLQLSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELG 218 (483)
Q Consensus 139 ~~~~~~~~~~~~fl~~~~~~d~~p~s~kvi~l~~~~~v~~A~~~l~e~~i~s~PV~d~~~~~~vGilt~~D~i~il~~~~ 218 (483)
.+.....+.+.+||...+++|+|+.+.++++++.+.|+.+|++.|.+++++++||||.+.++++|++|..|++.++....
T Consensus 6 ~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~ 85 (334)
T 2qrd_G 6 ETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYY 85 (334)
T ss_dssp HHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHh
Confidence 34566788999999999999999999999999999999999999999999999999987788999999999998776542
Q ss_pred cCCCCC-CHHHHhhccHHHHHHHHhhhhccccCCCCCCCCCCCe--EEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCC
Q 011558 219 TNGSNL-TEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPL--VQAGPYDSLKEVALKILQNKVATVPIIHSTGPAG 295 (483)
Q Consensus 219 ~~~~~l-~~~~l~~~~i~~~~~~~~~~~~~~~~d~~g~~~~~~~--v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g 295 (483)
...... ..+.+....+..+++....+ |..+. +++.+++++.+|++.|.+++++++||++++ .+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~l~~i------------m~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~--~~ 151 (334)
T 2qrd_G 86 QSSSFPEAIAEIDKFRLLGLREVERKI------------GAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVD--GE 151 (334)
T ss_dssp HHCSCGGGGGGGGSCBHHHHHHHHHHH------------TCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEE--TT
T ss_pred hccCCccHHHHHhhhchhhHHHHHHhh------------ccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCC--CC
Confidence 210000 01233455666666554332 23445 899999999999999999999999999652 12
Q ss_pred -CcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCE
Q 011558 296 -SCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSS 374 (483)
Q Consensus 296 -~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~ 374 (483)
....++|++|.+||++++...... ......+++++ ..+|.+++.++.+++++.+|++.|.++++++
T Consensus 152 ~~~~~~~Givt~~dl~~~~~~~~~~----~~~~~~~v~~l---------~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~ 218 (334)
T 2qrd_G 152 TGSEMIVSVLTQYRILKFISMNCKE----TAMLRVPLNQM---------TIGTWSNLATASMETKVYDVIKMLAEKNISA 218 (334)
T ss_dssp TTEEEEEEEEEHHHHHHHHHHHCGG----GGGCCCBGGGS---------SCSBCSSCCCBCTTSBHHHHHHHHHHHTCSE
T ss_pred cCccceEEEeeHHHHHHHHHhhccc----hhhhhCcHHHh---------CCcccCCceEECCCCcHHHHHHHHHHcCCcE
Confidence 001399999999999988653211 01112233332 1137788999999999999999999999999
Q ss_pred EEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCC
Q 011558 375 IPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGV 454 (483)
Q Consensus 375 lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~ 454 (483)
+||+|++|+++|++|.+|+++.+..+.+... +.++.+++..... . + +++++|.+++++.+|+++|.++++
T Consensus 219 ~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~---~~~v~~~m~~~~~---~--~--~~~~~v~~~~~l~~~~~~m~~~~~ 288 (334)
T 2qrd_G 219 VPIVNSEGTLLNVYESVDVMHLIQDGDYSNL---DLSVGEALLKRPA---N--F--DGVHTCRATDRLDGIFDAIKHSRV 288 (334)
T ss_dssp EEEECTTCBEEEEEETHHHHHHHTTSCGGGG---GSBHHHHHTTCCT---T--C--CCCCEECTTCBHHHHHHHHHHSCC
T ss_pred EEEEcCCCcEEEEEEHHHHHHHhhccccccc---cCcHHHHHhcccc---c--C--CCCEEECCCCcHHHHHHHHHHcCC
Confidence 9999988999999999999987765433222 3567774432000 0 0 368899999999999999999999
Q ss_pred CEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 455 RRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 455 ~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+++|||| ++|+++|+||++||++++..
T Consensus 289 ~~l~Vvd-~~g~l~Giit~~dil~~~~~ 315 (334)
T 2qrd_G 289 HRLFVVD-ENLKLEGILSLADILNYIIY 315 (334)
T ss_dssp CEEEEEC-TTCBEEEEEEHHHHHHHHHS
T ss_pred CEEEEEC-CCCeEEEEEeHHHHHHHHHh
Confidence 9999999 57999999999999999864
No 3
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=100.00 E-value=4.1e-34 Score=284.80 Aligned_cols=300 Identities=32% Similarity=0.551 Sum_probs=237.7
Q ss_pred HHHHHHHHhhccccccccCCCCccEEEEccCcCHHHHHHHHHHcCCCeeeceeCCCCceeEEeeHHHHHHHHHHhccCCC
Q 011558 143 LSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGS 222 (483)
Q Consensus 143 ~~~~~~~~fl~~~~~~d~~p~s~kvi~l~~~~~v~~A~~~l~e~~i~s~PV~d~~~~~~vGilt~~D~i~il~~~~~~~~ 222 (483)
..++.|+.||+..+++|+|+.+.++++++.+.|+.+|++.|.+++++++||+|.+.++++|++|..|++..+........
T Consensus 23 ~~~~~~~~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~ 102 (330)
T 2v8q_E 23 SNSSVYTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSAL 102 (330)
T ss_dssp CCSCHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccc
Confidence 34567999999999999999999999999999999999999999999999999887789999999999987754321110
Q ss_pred CCCHHHHhhccHHHHHHHHhhhhccccCCCCCCCCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEE
Q 011558 223 NLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILY 302 (483)
Q Consensus 223 ~l~~~~l~~~~i~~~~~~~~~~~~~~~~d~~g~~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~G 302 (483)
....++....+..|..... .+|.++++++.+++++.+|++.|.+++++++||++ .++| +++|
T Consensus 103 -~~~~~l~~~~~~~~~~~~~------------~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~---~~~G 164 (330)
T 2v8q_E 103 -VQIYELEEHKIETWREVYL------------QDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVID--PESG---NTLY 164 (330)
T ss_dssp -TTCCCGGGCBHHHHHHHHS------------SSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEEC--TTTC---CEEE
T ss_pred -cchhHHhhccHHHHHHHHh------------hcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEe--CCCC---cEEE
Confidence 0112334455666654332 24678899999999999999999999999999994 2235 7999
Q ss_pred EechhhHHHHHHhhccCCCCCCcccccccccccccccccccccccC-CCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCC
Q 011558 303 LASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANG-RPFAMLRPTASLGSALALLVQADVSSIPIVDDN 381 (483)
Q Consensus 303 iit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~~~~~~v~~~m~-~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~ 381 (483)
++|.+|+++++.......+ ...+...+++++.+ |. +++.++.+++++.+|++.|.+++++++||+|++
T Consensus 165 ivt~~dl~~~~~~~~~~~~-~~~~~~~~v~~~~v----------~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~ 233 (330)
T 2v8q_E 165 ILTHKRILKFLKLFITEFP-KPEFMSKSLEELQI----------GTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEK 233 (330)
T ss_dssp EECHHHHHHHHHHHSCSSS-CCGGGGSBHHHHTC----------SBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTT
T ss_pred EEcHHHHHHHHHHHhhccC-chhhhcCCHHHhcc----------cCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCC
Confidence 9999999998865432211 01122334444422 33 578899999999999999999999999999989
Q ss_pred CcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEe
Q 011558 382 DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVE 461 (483)
Q Consensus 382 g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd 461 (483)
|+++|++|.+|+++....+.+... +.++.+++.... .|.+++++|.+++++.+|+++|.+++++++||+|
T Consensus 234 ~~l~Giit~~dl~~~~~~~~~~~~---~~~v~~~~~~~~-------~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd 303 (330)
T 2v8q_E 234 GRVVDIYSKFDVINLAAEKTYNNL---DVSVTKALQHRS-------HYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVD 303 (330)
T ss_dssp SBEEEEEEGGGTGGGGGSSCCCCC---SSBHHHHGGGCC-------SCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CcEEEEEEHHHHHHHHhccccccc---cCcHHHHHhccc-------cccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEc
Confidence 999999999999986654333222 467787664321 3456889999999999999999999999999999
Q ss_pred CCCCeEEEEEehHHHHHHHhc
Q 011558 462 AGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 462 ~~~~~l~GiIs~~DIl~~l~~ 482 (483)
++|+++|+||.+||++++..
T Consensus 304 -~~g~l~Giit~~Dil~~~~~ 323 (330)
T 2v8q_E 304 -EHDVVKGIVSLSDILQALVL 323 (330)
T ss_dssp -TTSBEEEEEEHHHHHHHHHS
T ss_pred -CCCcEEEEEeHHHHHHHHHh
Confidence 57999999999999999864
No 4
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.98 E-value=9.7e-32 Score=260.74 Aligned_cols=269 Identities=14% Similarity=0.293 Sum_probs=205.3
Q ss_pred cccccCCCCccEEEEccCcCHHHHHHHHHHcCCCeeeceeCCCCceeEEeeHHHHHHHHHHhccCCCCCCHHHHhhccHH
Q 011558 156 TVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTIS 235 (483)
Q Consensus 156 ~~~d~~p~s~kvi~l~~~~~v~~A~~~l~e~~i~s~PV~d~~~~~~vGilt~~D~i~il~~~~~~~~~l~~~~l~~~~i~ 235 (483)
++.+.+.. .++++++.+.|+.+|++.|.+++++++||+|++.++++|++|..|++.++..... ...+......
T Consensus 4 ~v~~~i~~-~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~------~~~~~~~~~~ 76 (280)
T 3kh5_A 4 RVMKIAQN-KKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSK------YNLIREKHER 76 (280)
T ss_dssp BGGGTSCC-SCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGG------GHHHHTTSTT
T ss_pred hHHHHhcC-CCcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccch------hhhhhhcccc
Confidence 34455543 3799999999999999999999999999999866789999999999976532110 0001000000
Q ss_pred HHHHHHhhhhccccCCCCCCCCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHh
Q 011558 236 AWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICR 315 (483)
Q Consensus 236 ~~~~~~~~~~~~~~~d~~g~~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~ 315 (483)
.+... . ...++.+|.++++++.+++++.+|++.|.+++++++||+|+ +| +++|++|.+|+++++..
T Consensus 77 ~~~~~---~-----~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~ 142 (280)
T 3kh5_A 77 NFLAA---I-----NEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVND---EN---QLISLITERDVIRALLD 142 (280)
T ss_dssp CHHHH---T-----TSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECT---TC---BEEEEEEHHHHHHHHGG
T ss_pred chhHH---h-----hhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcC---CC---EEEEEEEHHHHHHHHhh
Confidence 00000 0 00112256778999999999999999999999999999954 45 89999999999988754
Q ss_pred hccCCCCCCcccccccccccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHH
Q 011558 316 HFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA 395 (483)
Q Consensus 316 ~~~~~~~~~~~~~~~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~ 395 (483)
.... .. .++++|.+++.++.+++++.++++.|.+++++++||+ ++|+++|++|.+|+++
T Consensus 143 ~~~~--------~~------------~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~ 201 (280)
T 3kh5_A 143 KIDE--------NE------------VIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIK 201 (280)
T ss_dssp GSCT--------TC------------BSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHH
T ss_pred cCCC--------CC------------CHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHH
Confidence 3211 11 3455588889999999999999999999999999999 5899999999999998
Q ss_pred HHhcccc-ccc------ccCCccHHHHHhcCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEE
Q 011558 396 LAKDKAY-AQI------HLDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVE 468 (483)
Q Consensus 396 l~~~~~~-~~~------~l~~~~v~~~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~ 468 (483)
....+.. ... ...+.++.+ +|.+++++|.+++++.+|+++|.+++++++||+| ++|+++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~v~~-------------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~~g~~~ 267 (280)
T 3kh5_A 202 LLGSDWAFNHMQTGNVREITNVRMEE-------------IMKRDVITAKEGDKLKKIAEIMVTNDIGALPVVD-ENLRIK 267 (280)
T ss_dssp HHTSHHHHHHHHSCCTHHHHHCBHHH-------------HSBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEEC-TTCBEE
T ss_pred HHhhhhhhhhhcccchhhhhCCcHHH-------------HhcCCCEEECCCCCHHHHHHHHHHCCCCEEEEEC-CCCeEE
Confidence 7653211 000 001233444 6777889999999999999999999999999999 578999
Q ss_pred EEEehHHHHHHH
Q 011558 469 GIISLSDVFRFL 480 (483)
Q Consensus 469 GiIs~~DIl~~l 480 (483)
|+||++||++++
T Consensus 268 Givt~~dil~~l 279 (280)
T 3kh5_A 268 GIITEKDVLKYF 279 (280)
T ss_dssp EEEEHHHHGGGG
T ss_pred EEEeHHHHHHhh
Confidence 999999999876
No 5
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.97 E-value=5.9e-31 Score=257.88 Aligned_cols=264 Identities=10% Similarity=0.104 Sum_probs=207.9
Q ss_pred cccccccCCCCccEEEEccCcCHHHHHHHHHHcCCCeeeceeCCCCceeEEeeHHHHHHHHHHhccCCCCCCHHHHhhcc
Q 011558 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (483)
Q Consensus 154 ~~~~~d~~p~s~kvi~l~~~~~v~~A~~~l~e~~i~s~PV~d~~~~~~vGilt~~D~i~il~~~~~~~~~l~~~~l~~~~ 233 (483)
..++.|+| +.++++++.+.|+.+|++.|.+++++++||+| ++++|++|..|++..+...... ...
T Consensus 19 ~~~V~dim--~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d---~~l~GivT~~Di~~~~~~~~~~----------~~~ 83 (296)
T 3ddj_A 19 GMNIETLM--IKNPPILSKEDRLGSAFKKINEGGIGRIIVAN---EKIEGLLTTRDLLSTVESYCKD----------SCS 83 (296)
T ss_dssp CSSGGGTC--EESCCEECTTSBHHHHHHHTTGGGCCEEEEES---SSEEEEEEHHHHHGGGTTCC-------------CC
T ss_pred ccCHHHhc--cCCCcEECCCccHHHHHHHHHHCCCceEEEEC---CeEEEEEeHHHHHHHhcccccc----------ccc
Confidence 46688888 44899999999999999999999999999999 6799999999998765321110 001
Q ss_pred HHHHHHHHhhhhccccCCCCCCCCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHH
Q 011558 234 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (483)
Q Consensus 234 i~~~~~~~~~~~~~~~~d~~g~~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l 313 (483)
...+..... .. ++.+|.++++++.+++++.+|++.|.+++++++||+|+ +| +++|++|.+|+++++
T Consensus 84 ~~~~~~~~~----~~----v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~---~~---~lvGivt~~dl~~~~ 149 (296)
T 3ddj_A 84 QGDLYHIST----TP----IIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDI---ND---KPVGIVTEREFLLLY 149 (296)
T ss_dssp HHHHHHHHT----SB----GGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHGGGG
T ss_pred chhhHHHhc----cc----HHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHhh
Confidence 111111100 01 12256778899999999999999999999999999954 45 899999999998876
Q ss_pred HhhccCCCCCCcccccccccccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHH
Q 011558 314 CRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDI 393 (483)
Q Consensus 314 ~~~~~~~~~~~~~~~~~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di 393 (483)
..... .. .++++|.+++.++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+
T Consensus 150 ~~~~~---------~~------------~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl 208 (296)
T 3ddj_A 150 KDLDE---------IF------------PVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNA 208 (296)
T ss_dssp GGSCC---------CC------------BHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHH
T ss_pred hcccc---------cc------------cHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHH
Confidence 42211 11 3455588899999999999999999999999999999999999999999999
Q ss_pred HHHHhccccccc---ccCCccHHHHHhcCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEE
Q 011558 394 TALAKDKAYAQI---HLDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGI 470 (483)
Q Consensus 394 ~~l~~~~~~~~~---~l~~~~v~~~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~Gi 470 (483)
++.+.... ... ...+.++.+ +|.+++++|.+++++.+|+++|.+++++++||+| ++|+++|+
T Consensus 209 ~~~~~~~~-~~~~~~~~~~~~v~~-------------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~~g~~~Gi 273 (296)
T 3ddj_A 209 IKQLAKAV-DKLDPDYFYGKVVKD-------------VMVTNLVTIDELASVNRAAAEMIVKRIGSLLILN-KDNTIRGI 273 (296)
T ss_dssp HHHHHHHH-HHTCTHHHHTCBHHH-------------HSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEE
T ss_pred HHHHHHHH-hhcChhhhcCcCHHH-------------HhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEC-CCCeEEEE
Confidence 98665221 110 011244555 6777889999999999999999999999999999 57999999
Q ss_pred EehHHHHHHHhc
Q 011558 471 ISLSDVFRFLLG 482 (483)
Q Consensus 471 Is~~DIl~~l~~ 482 (483)
||++||++++..
T Consensus 274 it~~Dil~~l~~ 285 (296)
T 3ddj_A 274 ITERDLLIALHH 285 (296)
T ss_dssp EEHHHHHHHHHH
T ss_pred EcHHHHHHHHHH
Confidence 999999999863
No 6
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.96 E-value=8.3e-29 Score=240.55 Aligned_cols=263 Identities=17% Similarity=0.251 Sum_probs=180.3
Q ss_pred ccccCCCCccEEEEccCcCHHHHHHHHHHcCCCeeeceeCCCCceeEEeeHHHHHHHHHHhccCCCCCCHHHHhhccHHH
Q 011558 157 VYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISA 236 (483)
Q Consensus 157 ~~d~~p~s~kvi~l~~~~~v~~A~~~l~e~~i~s~PV~d~~~~~~vGilt~~D~i~il~~~~~~~~~l~~~~l~~~~i~~ 236 (483)
+.|+| ..++++++.+.|+.+|++.|.++++.++||+|.+ ++++|++|..|++..+.. .
T Consensus 3 v~~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~-~~~~Giv~~~dl~~~~~~-------~------------ 60 (282)
T 2yzq_A 3 VKTIM--TQNPVTITLPATRNYALELFKKYKVRSFPVVNKE-GKLVGIISVKRILVNPDE-------E------------ 60 (282)
T ss_dssp HHHHS--EESCCCEESSCC------------CCEEEEECTT-CCEEEEEESSCC--------------------------
T ss_pred hHHhc--cCCCeEECCCCcHHHHHHHHHHcCCCeEEEEcCC-CcEEEEEEHHHHHhhhcc-------C------------
Confidence 34455 2468899999999999999999999999999974 679999999998743210 0
Q ss_pred HHHHHhhhhccccCCCCCCCCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHH-HHHh
Q 011558 237 WKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK-CICR 315 (483)
Q Consensus 237 ~~~~~~~~~~~~~~d~~g~~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~-~l~~ 315 (483)
.. ..++.++++++.+++++.+|++.|.+++++++||+++ +| +++|++|..|+++ ++..
T Consensus 61 -----------~v----~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~---~~---~~~Giit~~di~~~~~~~ 119 (282)
T 2yzq_A 61 -----------QL----AMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDS---KG---KPVGILTVGDIIRRYFAK 119 (282)
T ss_dssp ------------------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHTTTT
T ss_pred -----------CH----HHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---EEEEEEEHHHHHHHHHhc
Confidence 00 1134566889999999999999999999999999964 35 7999999999998 6542
Q ss_pred hccCCCCCCcccccccccccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHH-
Q 011558 316 HFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDIT- 394 (483)
Q Consensus 316 ~~~~~~~~~~~~~~~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~- 394 (483)
. . ..... .++++|.+++.++.+++++.++++.|.+++++++||+|++|+++|++|..|++
T Consensus 120 ~--~-----~~~~~------------~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~ 180 (282)
T 2yzq_A 120 S--E-----KYKGV------------EIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLR 180 (282)
T ss_dssp C--S-----GGGGC------------BSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGG
T ss_pred c--C-----CcccC------------cHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhh
Confidence 1 0 00111 34556888899999999999999999999999999999889999999999998
Q ss_pred -----HHHhccc--ccc-c-ccCCccHHHHHhc--CCCCCCCc-ccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeC
Q 011558 395 -----ALAKDKA--YAQ-I-HLDEMNIHQALQL--GQDANPSL-GFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEA 462 (483)
Q Consensus 395 -----~l~~~~~--~~~-~-~l~~~~v~~~l~~--~~~~~~~~-~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~ 462 (483)
+...... ... . .+........... ......+. ++|.+++++|.+++++.+|+++|.+++++++||+|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd- 259 (282)
T 2yzq_A 181 DSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIR- 259 (282)
T ss_dssp CGGGCC--------------------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-
T ss_pred hhhhhhhhccchhhhhhhhhhhcccchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEEC-
Confidence 3221000 000 0 0000000000000 00011222 28888999999999999999999999999999999
Q ss_pred CCCeEEEEEehHHHHHHHhc
Q 011558 463 GSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 463 ~~~~l~GiIs~~DIl~~l~~ 482 (483)
++|+++|+||++||++++..
T Consensus 260 ~~~~lvGiit~~Dil~~~~~ 279 (282)
T 2yzq_A 260 GEGDLIGLIRDFDLLKVLVK 279 (282)
T ss_dssp TTTEEEEEEEHHHHGGGGCC
T ss_pred CCCCEEEEEeHHHHHHHHHh
Confidence 46899999999999998753
No 7
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=99.91 E-value=2.7e-24 Score=172.84 Aligned_cols=86 Identities=43% Similarity=0.835 Sum_probs=77.4
Q ss_pred cCCcceEEEEEecCCCceEEEEeccCCCCCCCCCCcCCCCCCeEEEEEEcCCceEEEEEEEcCeeeeCCCCCeeeCCCCC
Q 011558 16 VGSILVPVRFIWPNGGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRHDENQPHVSGNYGV 95 (483)
Q Consensus 16 ~~~~~~~~~f~~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~l~~g~~~ykf~vdg~w~~d~~~~~~~~~~g~ 95 (483)
..+.++||+|+|.++|++|+|+|+||+|+ .++|.+. .|.|+++++|++|.|+|||+|||+|++||.+|++.|+.|+
T Consensus 6 ~~~~~~~v~F~wap~a~~V~v~GdFn~W~-~~~m~~~---~g~w~~~v~l~~G~~~YKf~VdG~~~~DP~~~~~~d~~G~ 81 (96)
T 1z0n_A 6 APAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTRS---QNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGT 81 (96)
T ss_dssp ----CEEEEEEECSCCSCEEEEEGGGTTC-CEECEEE---TTEEEEEEEECSEEEEEEEEETTEEECCTTSCEEECTTSC
T ss_pred CCCCceEEEEEECCCCcEEEEEEEeCCCc-cccCEEC---CCEEEEEEEccCCCEEEEEEECCeEEcCCCCCeEECCCCC
Confidence 34578999999999999999999999999 6899984 4899999999999999999999999999999999999999
Q ss_pred eeeEEEeccCC
Q 011558 96 VNCVYIAVPQP 106 (483)
Q Consensus 96 ~nn~~~v~~~~ 106 (483)
.||+|.| +++
T Consensus 82 ~Nnvi~V-~~~ 91 (96)
T 1z0n_A 82 VNNIIQV-KKT 91 (96)
T ss_dssp EEEEEEE-CSC
T ss_pred EeEEEEE-cCC
Confidence 9999999 654
No 8
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=99.90 E-value=7.7e-24 Score=199.09 Aligned_cols=88 Identities=32% Similarity=0.663 Sum_probs=81.2
Q ss_pred cceEEEEEecCCCceEEEEeccCCCCCCCCCCcCCCCCCeEEEEEEcCCceEEEEEEEcCeeeeCCCCCeeeCCCCCeee
Q 011558 19 ILVPVRFIWPNGGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRHDENQPHVSGNYGVVNC 98 (483)
Q Consensus 19 ~~~~~~f~~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~l~~g~~~ykf~vdg~w~~d~~~~~~~~~~g~~nn 98 (483)
.++||+|+|+++|++|+|+|+|+||++.++|.+.++.+|.|++++.|+||.|+|||+|||+|++|+.+|++.|+.|+.||
T Consensus 2 ~~vpv~f~W~~~a~~V~V~GsF~~W~~~~~m~k~~~~~G~f~~tv~LppG~y~YKFiVDG~w~~Dp~~p~~~d~~G~~nN 81 (252)
T 2qlv_B 2 LMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDSDNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPTATDQMGNFVN 81 (252)
T ss_dssp CCEEEEEEECSCCSCEEEEEGGGTTSSCEECEECSSSTTCEEEEEEECSEEEEEEEEETTEEECCTTSCEEBCSSCCCEE
T ss_pred CcEEEEEEEeCCCcEEEEEEEeCCCcCcccceeccCCCCcEEEEEECCCCEEEEEEEECCEEEeCCCCCEEecCCCcCcc
Confidence 47999999999999999999999999878999865558999999999999999999999999999999999999999999
Q ss_pred EEEeccCCC
Q 011558 99 VYIAVPQPD 107 (483)
Q Consensus 99 ~~~v~~~~~ 107 (483)
+|.| .+++
T Consensus 82 vi~V-~~~~ 89 (252)
T 2qlv_B 82 YIEV-RQPE 89 (252)
T ss_dssp EEEE-CC--
T ss_pred eeec-cCcc
Confidence 9999 7654
No 9
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.90 E-value=8.3e-23 Score=197.68 Aligned_cols=195 Identities=18% Similarity=0.329 Sum_probs=155.9
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccc-ccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQ-PVSSI 334 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~-~v~~l 334 (483)
++.++++++++++|+.+|++.|.+++++++||++ .++| +++|++|.+||++++...... .++.. ....+
T Consensus 9 i~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d--~~~~---~~~Givt~~di~~~~~~~~~~-----~~~~~~~~~~~ 78 (280)
T 3kh5_A 9 AQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVN--AGNN---KVVGIITSMDIVDFMGGGSKY-----NLIREKHERNF 78 (280)
T ss_dssp SCCSCCCCBCTTSBHHHHHHHHHHHCCCEEEEEC--TTTC---BEEEEEEHHHHHHHTTTSGGG-----HHHHTTSTTCH
T ss_pred hcCCCcEEECCCCcHHHHHHHHHhCCCcEeeEEE--CCCC---eEEEEEEHHHHHHHhcccchh-----hhhhhccccch
Confidence 4677899999999999999999999999999994 3345 899999999999987432110 00000 00000
Q ss_pred cccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHH
Q 011558 335 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQ 414 (483)
Q Consensus 335 ~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~ 414 (483)
+.....+++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++........ ..++.+
T Consensus 79 -~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~-----~~~v~~ 152 (280)
T 3kh5_A 79 -LAAINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKIDE-----NEVIDD 152 (280)
T ss_dssp -HHHTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSCT-----TCBSGG
T ss_pred -hHHhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCCC-----CCCHHH
Confidence 11123367788999999999999999999999999999999999999999999999999876543221 123333
Q ss_pred HHhcCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 415 ALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 415 ~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
+|.+++.++.+++++.++++.|.+++++++||++ +|+++|+||.+||++++.
T Consensus 153 -------------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~--~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 153 -------------YITRDVIVATPGERLKDVARTMVRNGFRRLPVVS--EGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp -------------GCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHT
T ss_pred -------------HhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHh
Confidence 6767888999999999999999999999999996 599999999999999874
No 10
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.88 E-value=3.2e-22 Score=195.66 Aligned_cols=189 Identities=18% Similarity=0.224 Sum_probs=155.0
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (483)
+|.++++++++++++.+|++.|.+++++++||++ + +++|++|.+||++++...... ....+.+
T Consensus 25 im~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d-----~---~l~GivT~~Di~~~~~~~~~~--------~~~~~~~- 87 (296)
T 3ddj_A 25 LMIKNPPILSKEDRLGSAFKKINEGGIGRIIVAN-----E---KIEGLLTTRDLLSTVESYCKD--------SCSQGDL- 87 (296)
T ss_dssp TCEESCCEECTTSBHHHHHHHTTGGGCCEEEEES-----S---SEEEEEEHHHHHGGGTTCC-----------CCHHHH-
T ss_pred hccCCCcEECCCccHHHHHHHHHHCCCceEEEEC-----C---eEEEEEeHHHHHHHhcccccc--------cccchhh-
Confidence 5677899999999999999999999999999993 4 899999999999987432111 0111111
Q ss_pred ccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHH
Q 011558 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQA 415 (483)
Q Consensus 336 i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~ 415 (483)
+.....+++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|+++...... ...++.+
T Consensus 88 ~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~~~~------~~~~v~~- 160 (296)
T 3ddj_A 88 YHISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKDLD------EIFPVKV- 160 (296)
T ss_dssp HHHHTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGGGSC------CCCBHHH-
T ss_pred HHHhcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhhccc------ccccHHH-
Confidence 011123567779999999999999999999999999999999999999999999999987554221 1346666
Q ss_pred HhcCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 416 LQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 416 l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
+|.++++++.+++++.+|+++|.+++++++||+| ++|+++|+||.+||++++.
T Consensus 161 ------------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 161 ------------FMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVID-DDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp ------------HSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHH
T ss_pred ------------hhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEc-CCCEEEEEEEHHHHHHHHH
Confidence 5666788999999999999999999999999999 5799999999999998864
No 11
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.87 E-value=2.6e-22 Score=195.34 Aligned_cols=121 Identities=25% Similarity=0.466 Sum_probs=94.8
Q ss_pred CCcceEEEEEecC-CCceEEEEeccCCCCCCCCCCcCCCCCCeEEEEEEcCCceEEEEEEEcCeeeeCCCCCee-eCCCC
Q 011558 17 GSILVPVRFIWPN-GGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRHDENQPHV-SGNYG 94 (483)
Q Consensus 17 ~~~~~~~~f~~~~-~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~l~~g~~~ykf~vdg~w~~d~~~~~~-~~~~g 94 (483)
+....||+|+|++ +|++|+|+||||||+..+||.+.+. +|.|++++.||||.|+|||+|||+|++||++|.. +|+.|
T Consensus 166 ~~~k~~v~f~~~~~~~~~V~v~GsF~~W~~~~~l~k~~~-~g~~~~~~~L~~G~y~YkFiVDG~w~~d~~~~~~~~d~~G 244 (294)
T 3nme_A 166 GLKRKTVTLTLKDKGFSRVEISGLDIGWGQRIPLTLGKG-TGFWILKRELPEGQFEYKYIIDGEWTHNEAEPFIGPNKDG 244 (294)
T ss_dssp CCCCEEEEEEEECSSCSCEEEEETTTEEEEEEECEECTT-TCEEEEEEEECSEEEEEEEEETTEEECCTTSCEECSCTTS
T ss_pred ccccccceeeeccCCCCEEEEEEeccCCCCcccceEcCC-CCEEEEEEECCCceEEEEEEECCEEeeCCCCCeeeECCCC
Confidence 4567899999999 6899999999999997789999653 6999999999999999999999999999999976 79999
Q ss_pred CeeeEEEeccCCCCCCCCCCCCCCCCcccccccccCCCCccccHHHHHHHHHHHHHhhcc
Q 011558 95 VVNCVYIAVPQPDMVPNTISPETSGNMEVDDVVMRPEGFAQYSEADLQLSRDRISSFLST 154 (483)
Q Consensus 95 ~~nn~~~v~~~~~~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 154 (483)
++||+|.| ++ +..+. .-.+.+... ..-|.+.+++ |..|++||..
T Consensus 245 ~~nn~~~v-~~-~~~~~--------~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~ 288 (294)
T 3nme_A 245 HTNNYAKV-VD-DPTSV--------DGTTRERLS--SEDPELLEEE----RSKLIQFLET 288 (294)
T ss_dssp CCEEEEEE-CC-CCCTT--------CTTHHHHHS--SSSCCCCHHH----HHHHHHHHHH
T ss_pred CEeEEEEE-CC-CCcch--------hHHHHHHhh--cCCccccHHH----HHHHHHHHHh
Confidence 99999999 64 22221 112221111 1125666666 7788888853
No 12
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.85 E-value=7.9e-21 Score=188.05 Aligned_cols=201 Identities=17% Similarity=0.272 Sum_probs=151.1
Q ss_pred CCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccc
Q 011558 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (483)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (483)
...+++.++.++++.+|++.|.+++++++||+++ +.+ +++|++|.+|++.++...+..... . ..+.....
T Consensus 38 ~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~--~~~---~lvGilt~~Dl~~~l~~~~~~~~~-~----~~l~~~~~ 107 (323)
T 3t4n_C 38 VSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDS--KTS---RFAGLLTTTDFINVIQYYFSNPDK-F----ELVDKLQL 107 (323)
T ss_dssp SEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEET--TTT---EEEEEECHHHHHHHHHHHHHCGGG-G----GGGGGCBH
T ss_pred CCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeC--CCC---eEEEEEEHHHHHHHHHHHHcCcch-h----HHHHHHHH
Confidence 3567899999999999999999999999999964 334 899999999999987543322100 0 01111110
Q ss_pred cccc--cccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCc-----EEEEEeHHHHHHHHhcccccccccCC
Q 011558 337 GTWV--PRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDS-----LLDIYSRSDITALAKDKAYAQIHLDE 409 (483)
Q Consensus 337 ~~~~--~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~-----lvGiit~~di~~l~~~~~~~~~~l~~ 409 (483)
..+. .++.++|.++++++.+++++.+|++.|.+++++++||+|+++. ++|++|.+|+++.+...... ..+.+
T Consensus 108 ~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~-~~~~~ 186 (323)
T 3t4n_C 108 DGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE-THFLK 186 (323)
T ss_dssp HHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG-GGGCC
T ss_pred HHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc-hhhhh
Confidence 0110 1234557888999999999999999999999999999998775 99999999999866532211 11223
Q ss_pred ccHHHHHhcCCCCCCCccc---CCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 410 MNIHQALQLGQDANPSLGF---NGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 410 ~~v~~~l~~~~~~~~~~~~---m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
.++.+ + |.++++++.+++++.+|+++|.+++++++||+| ++|+++|+||.+||++++..
T Consensus 187 ~~v~~-------------~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd-~~~~~~Giit~~dl~~~~~~ 248 (323)
T 3t4n_C 187 IPIGD-------------LNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIID-ENGYLINVYEAYDVLGLIKG 248 (323)
T ss_dssp SBGGG-------------TTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEETTHHHHHHHT
T ss_pred CcHHH-------------cCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEEC-CCCeEEEEEeHHHHHHHHhh
Confidence 44544 4 667899999999999999999999999999999 57999999999999998753
No 13
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.84 E-value=1.3e-20 Score=187.18 Aligned_cols=203 Identities=18% Similarity=0.251 Sum_probs=156.8
Q ss_pred CCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccccc
Q 011558 258 PRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLG 337 (483)
Q Consensus 258 ~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~ 337 (483)
..+++++++++++.+|++.|.+++++++||+++ ..+ +++|++|.+|+++.+...+..... ....+....+.
T Consensus 44 ~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~--~~~---~~vGivt~~Dll~~l~~~~~~~~~----~~~~l~~~~~~ 114 (330)
T 2v8q_E 44 SSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDS--KKQ---SFVGMLTITDFINILHRYYKSALV----QIYELEEHKIE 114 (330)
T ss_dssp EEEEEEEETTSBHHHHHHHHHHHTCSEEEEEET--TTT---EEEEEEEHHHHHHHHHHHHHHHTT----TCCCGGGCBHH
T ss_pred CCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeC--CCC---eEEEEEEHHHHHHHHHHHHhcccc----chhHHhhccHH
Confidence 678999999999999999999999999999965 224 799999999999887653311000 00112222233
Q ss_pred ccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcC-CCcEEEEEeHHHHHHHHhccccc--ccccCCccHHH
Q 011558 338 TWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDD-NDSLLDIYSRSDITALAKDKAYA--QIHLDEMNIHQ 414 (483)
Q Consensus 338 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~lvGiit~~di~~l~~~~~~~--~~~l~~~~v~~ 414 (483)
.+...++++|.+++.++.+++++.+|+++|.+++++++||+|+ +|+++|++|.+|+++........ ...+...++.+
T Consensus 115 ~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~ 194 (330)
T 2v8q_E 115 TWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFMSKSLEE 194 (330)
T ss_dssp HHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCSSSCCGGGGSBHHH
T ss_pred HHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhccCchhhhcCCHHH
Confidence 3444566789999999999999999999999999999999998 89999999999999866432110 00111234444
Q ss_pred HHhcCCCCCCCcccCC-CcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 415 ALQLGQDANPSLGFNG-QRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 415 ~l~~~~~~~~~~~~m~-~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
.. +|. ++++++.+++++.+|+++|.+++++++||+| ++|+++|+||.+||++++.
T Consensus 195 ~~-----------v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~~~l~Giit~~dl~~~~~ 250 (330)
T 2v8q_E 195 LQ-----------IGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVD-EKGRVVDIYSKFDVINLAA 250 (330)
T ss_dssp HT-----------CSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEEC-TTSBEEEEEEGGGTGGGGG
T ss_pred hc-----------ccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEEC-CCCcEEEEEEHHHHHHHHh
Confidence 21 243 5788999999999999999999999999999 5799999999999998764
No 14
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.82 E-value=2.4e-20 Score=180.74 Aligned_cols=172 Identities=16% Similarity=0.240 Sum_probs=128.6
Q ss_pred CCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccc
Q 011558 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (483)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (483)
|.++++++++++++.+|++.|.+++++++||+++ +| +++|++|..|+++.+. ..
T Consensus 7 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~---~~---~~~Giv~~~dl~~~~~-------------~~------- 60 (282)
T 2yzq_A 7 MTQNPVTITLPATRNYALELFKKYKVRSFPVVNK---EG---KLVGIISVKRILVNPD-------------EE------- 60 (282)
T ss_dssp SEESCCCEESSCC------------CCEEEEECT---TC---CEEEEEESSCC---------------------------
T ss_pred ccCCCeEECCCCcHHHHHHHHHHcCCCeEEEEcC---CC---cEEEEEEHHHHHhhhc-------------cC-------
Confidence 4567888999999999999999999999999953 45 8999999999986431 12
Q ss_pred cccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHH-HHhcccccccccCCccHHHH
Q 011558 337 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA-LAKDKAYAQIHLDEMNIHQA 415 (483)
Q Consensus 337 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~-l~~~~~~~~~~l~~~~v~~~ 415 (483)
+++++|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|++|.+|+++ .+..+... .+.++.+
T Consensus 61 -----~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~~~----~~~~v~~- 130 (282)
T 2yzq_A 61 -----QLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEKY----KGVEIEP- 130 (282)
T ss_dssp --------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCSGG----GGCBSTT-
T ss_pred -----CHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhccCCc----ccCcHHH-
Confidence 344558888899999999999999999999999999998899999999999998 55432100 0123333
Q ss_pred HhcCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHH
Q 011558 416 LQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVF 477 (483)
Q Consensus 416 l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl 477 (483)
+|..+++++.+++++.++++.|.+++++++||+| ++|+++|+||.+|++
T Consensus 131 ------------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 131 ------------YYQRYVSIVWEGTPLKAALKALLLSNSMALPVVD-SEGNLVGIVDETDLL 179 (282)
T ss_dssp ------------TSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEEC-TTSCEEEEEEGGGGG
T ss_pred ------------HhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHh
Confidence 6777889999999999999999999999999999 579999999999998
No 15
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.82 E-value=9.6e-20 Score=181.09 Aligned_cols=205 Identities=14% Similarity=0.147 Sum_probs=150.4
Q ss_pred CCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccccc
Q 011558 258 PRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLG 337 (483)
Q Consensus 258 ~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~ 337 (483)
..+++++++++++.+|++.|.+++++++||+++ +.+ +++|+++.+|+++++......... ...+ ..+....+.
T Consensus 31 ~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~--~~~---~~vGiv~~~Dl~~~~~~~~~~~~~-~~~~-~~~~~~~~~ 103 (334)
T 2qrd_G 31 SFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDS--EAN---KFAGLLTMADFVNVIKYYYQSSSF-PEAI-AEIDKFRLL 103 (334)
T ss_dssp EEEEEEEETTSBHHHHHHHHHHHTCSCEEEEET--TTT---EEEEEECHHHHHHHHHHHHHHCSC-GGGG-GGGGSCBHH
T ss_pred CCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeC--CCC---eEEEEEEHHHHHHHHHHHhhccCC-ccHH-HHHhhhchh
Confidence 346889999999999999999999999999964 334 899999999999877543210000 0000 011111111
Q ss_pred ccccccccccCCCe--eEecCCCCHHHHHHHHHhCCCCEEEEEcCCCc-----EEEEEeHHHHHHHHhcccccccccCCc
Q 011558 338 TWVPRIGEANGRPF--AMLRPTASLGSALALLVQADVSSIPIVDDNDS-----LLDIYSRSDITALAKDKAYAQIHLDEM 410 (483)
Q Consensus 338 ~~~~~v~~~m~~~~--~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~-----lvGiit~~di~~l~~~~~~~~~~l~~~ 410 (483)
.+....+++|.+++ +++.+++++.+|++.|.+++++++||+|++|. ++|++|.+|+++........ ..+...
T Consensus 104 ~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~~-~~~~~~ 182 (334)
T 2qrd_G 104 GLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKE-TAMLRV 182 (334)
T ss_dssp HHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCGG-GGGCCC
T ss_pred hHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhccc-hhhhhC
Confidence 22112234566666 89999999999999999999999999997654 99999999999866532111 111123
Q ss_pred cHHHHHhcCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 411 NIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 411 ~v~~~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
++.+.. .+|.+++.++.+++++.+|+++|.+++++++||+| ++|+++|+||.+||++++.
T Consensus 183 ~v~~l~----------~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd-~~~~~~Giit~~dl~~~~~ 242 (334)
T 2qrd_G 183 PLNQMT----------IGTWSNLATASMETKVYDVIKMLAEKNISAVPIVN-SEGTLLNVYESVDVMHLIQ 242 (334)
T ss_dssp BGGGSS----------CSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEETHHHHHHHT
T ss_pred cHHHhC----------CcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEc-CCCcEEEEEEHHHHHHHhh
Confidence 333310 03667888999999999999999999999999999 5799999999999999864
No 16
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.80 E-value=4.9e-20 Score=165.19 Aligned_cols=137 Identities=17% Similarity=0.299 Sum_probs=105.2
Q ss_pred ccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccc-ccc--CCcc---HHHH
Q 011558 342 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQ-IHL--DEMN---IHQA 415 (483)
Q Consensus 342 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~-~~l--~~~~---v~~~ 415 (483)
+|+++|+++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|+++......... ..+ .... ....
T Consensus 19 ~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (170)
T 4esy_A 19 PIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPAPEVEHL 98 (170)
T ss_dssp BGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHHHHHHH
T ss_pred CHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccchhhHHhh
Confidence 466779999999999999999999999999999999999999999999999986432111000 000 0000 0111
Q ss_pred HhcCCCCCCCc-ccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 416 LQLGQDANPSL-GFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 416 l~~~~~~~~~~-~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
.... ...+. ++|.+++++|.+++++.+|+++|.+++++++||+| +|+++|+||++||+++|+.
T Consensus 99 ~~~~--~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd--~g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 99 FETG--RKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ--DGVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp HHHH--TTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHTTTSCC
T ss_pred hccc--cccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE--CCEEEEEEEHHHHHHHHHh
Confidence 1000 01122 28888999999999999999999999999999999 4999999999999998864
No 17
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.76 E-value=4.5e-18 Score=148.55 Aligned_cols=119 Identities=16% Similarity=0.305 Sum_probs=105.3
Q ss_pred ccccccCC--CeeEecCCCCHHHHHHHHHhCCCCEEEEEcCC-CcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhc
Q 011558 342 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 418 (483)
Q Consensus 342 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~ 418 (483)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|+++....+. +.++.+
T Consensus 24 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~---- 92 (148)
T 3lv9_A 24 KIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN-------KIELEE---- 92 (148)
T ss_dssp BGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-------CCCGGG----
T ss_pred CHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC-------CccHHH----
Confidence 56677988 89999999999999999999999999999987 89999999999998654331 234444
Q ss_pred CCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 419 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 419 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+| ++++++.+++++.+|+++|.+++++++||+| ++|+++|+||+.||++++++
T Consensus 93 ---------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd-~~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 93 ---------IL-RDIIYISENLTIDKALERIRKEKLQLAIVVD-EYGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp ---------TC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEEC-TTSSEEEEEEHHHHHHHHHH
T ss_pred ---------hc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 67 6789999999999999999999999999999 57999999999999999976
No 18
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.76 E-value=2.1e-18 Score=152.34 Aligned_cols=122 Identities=18% Similarity=0.276 Sum_probs=100.2
Q ss_pred ccccC--CCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCC
Q 011558 344 GEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 421 (483)
Q Consensus 344 ~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~ 421 (483)
+++|. .+++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|+++...........+.+.++.+
T Consensus 18 ~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~------- 90 (156)
T 3k6e_A 18 ETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVH------- 90 (156)
T ss_dssp GGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGG-------
T ss_pred HHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHH-------
Confidence 34465 478999999999999999999999999999999999999999999986653322221122334444
Q ss_pred CCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 422 ANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 422 ~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
+|.++++++.+++++.+|+++|.++++ +|||| ++|+++|+||++||++++.
T Consensus 91 ------im~~~~~~v~~~~~l~~~~~~m~~~~~--lpVVd-~~g~l~GiiT~~Dil~~~~ 141 (156)
T 3k6e_A 91 ------MTKTDVAVVSPDFTITEVLHKLVDESF--LPVVD-AEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp ------TCBCSCCCBCTTCCHHHHHHHTTTSSE--EEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred ------hhcCCceecccccHHHHHHHHHHHcCC--eEEEe-cCCEEEEEEEHHHHHHHHH
Confidence 788889999999999999999988764 99999 5899999999999999884
No 19
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.76 E-value=5.5e-18 Score=144.66 Aligned_cols=120 Identities=15% Similarity=0.281 Sum_probs=104.4
Q ss_pred ccccccCC--CeeEecCCCCHHHHHHHHHhCCCCEEEEEcCC-CcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhc
Q 011558 342 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 418 (483)
Q Consensus 342 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~ 418 (483)
+++++|.+ +++++.+++++.+|+++|.+++++++||+|++ |+++|++|.+|+++....+. .+.++.+
T Consensus 7 ~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~------~~~~v~~---- 76 (130)
T 3i8n_A 7 PVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGS------GQKQLGA---- 76 (130)
T ss_dssp CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTT------TTSBHHH----
T ss_pred CHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCC------CcCCHHH----
Confidence 46677984 56789999999999999999999999999987 89999999999998765331 1356676
Q ss_pred CCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 419 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 419 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+| ++++++.+++++.+|+++|.+++++++||+| ++|+++|+||+.||++++++
T Consensus 77 ---------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 77 ---------VM-RPIQVVLNNTALPKVFDQMMTHRLQLALVVD-EYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp ---------HS-EECCEEETTSCHHHHHHHHHHHTCCEEEEEC-TTSCEEEEEEHHHHHHHHHT
T ss_pred ---------Hh-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEc-CCCCEEEEEEHHHHHHHHcC
Confidence 55 3578999999999999999999999999999 57999999999999999986
No 20
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.75 E-value=7.2e-18 Score=144.06 Aligned_cols=122 Identities=11% Similarity=0.190 Sum_probs=103.4
Q ss_pred ccccccC--CCeeEecCCCCHHHHHHHHHhCCCCEEEEEcC-CCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhc
Q 011558 342 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDD-NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 418 (483)
Q Consensus 342 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~ 418 (483)
+++++|. ++++++.+++++.+|+++|.+++++++||+++ +|+++|+++.+|+++....+.. +...++.+
T Consensus 3 ~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~----~~~~~v~~---- 74 (130)
T 3hf7_A 3 SVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKE----FTKEIMLR---- 74 (130)
T ss_dssp BHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSC----CCHHHHHH----
T ss_pred CHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCc----cchhhHHH----
Confidence 4566785 36889999999999999999999999999975 5899999999999987654321 11234555
Q ss_pred CCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 419 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 419 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+| ++++++.+++++.+|+++|.+++++++||+| ++|+++|+||+.||++++++
T Consensus 75 ---------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 75 ---------AA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVD-EYGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp ---------HS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEEC-TTSCEEEEEEHHHHHHHHHC
T ss_pred ---------hc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEc-CCCCEEEEeeHHHHHHHHhC
Confidence 45 4678999999999999999999999999999 57999999999999999986
No 21
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.75 E-value=6.7e-18 Score=142.10 Aligned_cols=119 Identities=19% Similarity=0.368 Sum_probs=104.8
Q ss_pred ccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCC
Q 011558 342 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 421 (483)
Q Consensus 342 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~ 421 (483)
+++++|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|+++.+|+++....+. .++.+
T Consensus 2 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~--------~~v~~------- 66 (122)
T 3kpb_A 2 LVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQNK--------KTIEE------- 66 (122)
T ss_dssp BHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTTC--------CBGGG-------
T ss_pred chHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhcc--------cCHHH-------
Confidence 456779999999999999999999999999999999999999999999999998665321 23444
Q ss_pred CCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 422 ANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 422 ~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+|.++++++.+++++.+|+++|.+++.+++||+| ++|+++|+||..||++++.+
T Consensus 67 ------~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 67 ------IMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVD-DYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp ------TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEEHHHHHHHHC-
T ss_pred ------HhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEEC-CCCCEEEEEeHHHHHHHhhc
Confidence 6666788999999999999999999999999999 57999999999999999864
No 22
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.74 E-value=3.6e-18 Score=145.19 Aligned_cols=120 Identities=13% Similarity=0.369 Sum_probs=102.0
Q ss_pred ccccccCCC--eeEecCCCCHHHHHHHHHhCCCCEEEEEcCC-CcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhc
Q 011558 342 RIGEANGRP--FAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 418 (483)
Q Consensus 342 ~v~~~m~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~ 418 (483)
+++++|.+. +.++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|+++...... .+.++.+
T Consensus 4 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~------~~~~v~~---- 73 (127)
T 3nqr_A 4 RVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDA------EAFSMDK---- 73 (127)
T ss_dssp BHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTC------CCCCHHH----
T ss_pred CHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccC------CCCCHHH----
Confidence 456778854 8999999999999999999999999999987 89999999999987553221 1356666
Q ss_pred CCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 419 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 419 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+|. +++++.+++++.+|+++|.+++++++||+| ++|+++|+||++||++++++
T Consensus 74 ---------~m~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 74 ---------VLR-TAVVVPESKRVDRMLKEFRSQRYHMAIVID-EFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp ---------HCB-CCCEEETTCBHHHHHHHHHHTTCCEEEEEC-TTSCEEEEEEHHHHHHHC--
T ss_pred ---------HcC-CCeEECCCCcHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 453 467899999999999999999999999999 57999999999999999876
No 23
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.73 E-value=2.4e-17 Score=147.91 Aligned_cols=119 Identities=18% Similarity=0.329 Sum_probs=105.4
Q ss_pred ccccccC--CCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCC-CcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhc
Q 011558 342 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 418 (483)
Q Consensus 342 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~ 418 (483)
+++++|. ++++++.+++++.+|+++|.+++++++||+|++ |+++|++|.+|+++....+. +.++.+
T Consensus 43 ~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~---- 111 (172)
T 3lhh_A 43 TISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGE-------RLELVD---- 111 (172)
T ss_dssp CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTC-------CCCGGG----
T ss_pred CHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcC-------cccHHH----
Confidence 5677798 678999999999999999999999999999987 99999999999998665331 244554
Q ss_pred CCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 419 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 419 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+| ++++++.+++++.+|+++|.+++++++||+| ++|+++|+||+.||++++++
T Consensus 112 ---------im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 112 ---------LV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVD-EYGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp ---------GC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHHT
T ss_pred ---------Hh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEe-CCCCEEEEeeHHHHHHHHhC
Confidence 67 7889999999999999999999999999999 57999999999999999875
No 24
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.73 E-value=9.6e-18 Score=142.99 Aligned_cols=118 Identities=14% Similarity=0.325 Sum_probs=101.1
Q ss_pred ccccccC--CCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCC-CcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhc
Q 011558 342 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 418 (483)
Q Consensus 342 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~ 418 (483)
+++++|. ++++++.+++++.+|+++|.+++++++||+|++ |+++|++|.+|+++..... +.++.+
T Consensus 6 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~--------~~~v~~---- 73 (129)
T 3jtf_A 6 TVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEP--------ALDIRS---- 73 (129)
T ss_dssp BHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCT--------TSCGGG----
T ss_pred CHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccC--------CcCHHH----
Confidence 4667788 678899999999999999999999999999985 8999999999998754321 234444
Q ss_pred CCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 419 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 419 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+|. +++++.+++++.+|+++|.+++.+++||+| ++|+++|+||++||++++++
T Consensus 74 ---------~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd-~~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 74 ---------LVR-PAVFIPEVKRLNVLLREFRASRNHLAIVID-EHGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp ---------GCB-CCCEEETTCBHHHHHHHHHTSSCCEEEEEC-C-CCEEEEEEHHHHHHHHHH
T ss_pred ---------HhC-CCeEeCCCCcHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 553 478999999999999999999999999999 57999999999999999976
No 25
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.73 E-value=1.8e-17 Score=143.41 Aligned_cols=123 Identities=17% Similarity=0.212 Sum_probs=104.5
Q ss_pred cccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCC--cEEEEEeHHHHHHHHhcccccccccCCccHHHHH
Q 011558 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDND--SLLDIYSRSDITALAKDKAYAQIHLDEMNIHQAL 416 (483)
Q Consensus 339 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g--~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l 416 (483)
+..+++++|.+++.++.+++++.+|+++|.+++++++||+|++| +++|+++.+|+++....+... +.++.+
T Consensus 3 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~~-----~~~v~~-- 75 (141)
T 2rih_A 3 MAIRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLDL-----DGPAMP-- 75 (141)
T ss_dssp --CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCCT-----TSBSGG--
T ss_pred cceEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCCC-----CCCHHH--
Confidence 34467788999999999999999999999999999999999888 999999999999865533111 234444
Q ss_pred hcCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 417 QLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 417 ~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
+|.++++++.++ ++.+|+++|.+++++++||+| ++|+++|+||.+||++++.
T Consensus 76 -----------~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd-~~g~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 76 -----------IANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVN-KNGELVGVLSIRDLCFERA 127 (141)
T ss_dssp -----------GCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHSCHH
T ss_pred -----------HcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEc-CCCcEEEEEEHHHHHHHHH
Confidence 677789999999 999999999999999999999 5799999999999987653
No 26
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.73 E-value=3.7e-17 Score=138.03 Aligned_cols=121 Identities=19% Similarity=0.243 Sum_probs=104.8
Q ss_pred ccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCC
Q 011558 342 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 421 (483)
Q Consensus 342 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~ 421 (483)
+++++|.+++.++.+++++.+|++.|.+++.+.+||+| +|+++|+++.+|+++....+.. ..+.++.+
T Consensus 2 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~~----~~~~~v~~------- 69 (125)
T 1pbj_A 2 RVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGDD----LAEVKVWE------- 69 (125)
T ss_dssp CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTCC----TTTSBHHH-------
T ss_pred CHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCCc----ccccCHHH-------
Confidence 35667988999999999999999999999999999999 8999999999999986653321 12356676
Q ss_pred CCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 422 ANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 422 ~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+|.+++.++.+++++.+++++|.+++++++||+| + |+++|+||.+||++++.+
T Consensus 70 ------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 70 ------VMERDLVTISPRATIKEAAEKMVKNVVWRLLVEE-D-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp ------HCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHC-
T ss_pred ------HcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEE-C-CEEEEEEEHHHHHHHHHh
Confidence 5666789999999999999999999999999999 5 999999999999998864
No 27
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.72 E-value=6.9e-17 Score=138.95 Aligned_cols=122 Identities=19% Similarity=0.355 Sum_probs=105.1
Q ss_pred ccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHH-HHHHhcccccccccCCccHHHHHhcCC
Q 011558 342 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDI-TALAKDKAYAQIHLDEMNIHQALQLGQ 420 (483)
Q Consensus 342 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di-~~l~~~~~~~~~~l~~~~v~~~l~~~~ 420 (483)
+++++|.+++.++.+++++.+|+++|.+++.+++||+|++|+++|+++.+|+ ++....+.. .+.++.+
T Consensus 9 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~-----~~~~v~~------ 77 (138)
T 2p9m_A 9 KVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYT-----LETTIGD------ 77 (138)
T ss_dssp BGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCCC-----SSCBHHH------
T ss_pred CHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhccc-----CCcCHHH------
Confidence 4566798899999999999999999999999999999988999999999999 876543221 1356666
Q ss_pred CCCCCcccCCCcceEEeCCCCHHHHHHHHHcCC-----CCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 421 DANPSLGFNGQRCQMCLRSDPLHKVMERLANPG-----VRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 421 ~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~-----~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+|.+++.++.+++++.+|+++|.+++ ++++||+| ++|+++|+||.+||++++..
T Consensus 78 -------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd-~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 78 -------VMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVD-KNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp -------HSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEEC-TTSBEEEEEEHHHHHHHHHH
T ss_pred -------HhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEEC-CCCeEEEEEEHHHHHHHHHh
Confidence 56667889999999999999999999 99999999 57999999999999998864
No 28
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.72 E-value=7.7e-18 Score=145.01 Aligned_cols=121 Identities=13% Similarity=0.275 Sum_probs=101.3
Q ss_pred ccccccC--CCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCC-CcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhc
Q 011558 342 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 418 (483)
Q Consensus 342 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~ 418 (483)
+++++|. +++.++.+++++.+|+++|.+++++++||+|++ |+++|++|.+||++........ +.++.+
T Consensus 4 ~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~-----~~~v~~---- 74 (136)
T 3lfr_A 4 QVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGD-----SDDVKK---- 74 (136)
T ss_dssp BHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGG-----GCCGGG----
T ss_pred ChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCC-----CcCHHH----
Confidence 4567787 568899999999999999999999999999987 8999999999998755421111 234444
Q ss_pred CCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 419 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 419 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+|. +++++.+++++.+|+++|.+++++++||+| ++|+++|+||++||++++++
T Consensus 75 ---------~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~g~lvGiit~~Dil~~l~~ 127 (136)
T 3lfr_A 75 ---------LLR-PATFVPESKRLNVLLREFRANHNHMAIVID-EYGGVAGLVTIEDVLEQIVG 127 (136)
T ss_dssp ---------TCB-CCCEEETTCBHHHHHHHHHHHTCCEEEEEC-TTSCEEEEEEHHHHHTTC--
T ss_pred ---------HcC-CCeEECCCCcHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 664 488999999999999999999999999999 57999999999999998865
No 29
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.72 E-value=2e-17 Score=145.40 Aligned_cols=119 Identities=18% Similarity=0.289 Sum_probs=103.7
Q ss_pred ccccccCC--CeeEecCCCCHHHHHHHHHhCCCCEEEEE-cC-CCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHh
Q 011558 342 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIV-DD-NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQ 417 (483)
Q Consensus 342 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVv-d~-~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~ 417 (483)
+++++|.+ +++++.+++++.+|+++|.+++++++||+ |+ +|+++|++|.+|+++....+. +.++.+
T Consensus 21 ~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~--- 90 (153)
T 3oco_A 21 VASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD-------KAKIST--- 90 (153)
T ss_dssp BHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT-------TSBGGG---
T ss_pred EeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC-------CCcHHH---
Confidence 45666886 78999999999999999999999999999 65 489999999999998654331 234444
Q ss_pred cCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 418 LGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 418 ~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+| ++++++.+++++.+|+++|.+++++++||+| ++|+++|+||+.||++++++
T Consensus 91 ----------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 91 ----------IM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVID-EYGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp ----------TC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEEC-TTSCEEEEECHHHHHHHHHC
T ss_pred ----------Hh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEe-CCCCEEEEeeHHHHHHHHhc
Confidence 67 6899999999999999999999999999999 57999999999999999875
No 30
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.71 E-value=3.4e-17 Score=143.01 Aligned_cols=127 Identities=22% Similarity=0.350 Sum_probs=103.4
Q ss_pred ccccccCC--CeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccc---------cccCCc
Q 011558 342 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQ---------IHLDEM 410 (483)
Q Consensus 342 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~---------~~l~~~ 410 (483)
+++++|.+ +++++.+++++.+|+++|.+++++++||+|++|+++|+++.+|++.+........ ....+.
T Consensus 6 ~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (152)
T 4gqw_A 6 TVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKTNGK 85 (152)
T ss_dssp BGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC-----CC
T ss_pred EhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHhccc
Confidence 56777987 7999999999999999999999999999999899999999999986432110000 000123
Q ss_pred cHHHHHhcCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 411 NIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 411 ~v~~~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
++.+ +|.++++++.+++++.+|+++|.+++++++||+| ++|+++|+||.+||++++..
T Consensus 86 ~v~~-------------~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd-~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 86 LVGD-------------LMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVD-SDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp BHHH-------------HSEESCCCEESSSBHHHHHHHHHHSSCCEEEEEC-TTSBEEEEEEHHHHHHHHHC
T ss_pred cHHH-------------hcCCCceEECCCCcHHHHHHHHHHCCCCEEEEEC-CCCcEEEEEEHHHHHHHHHh
Confidence 4444 6666788999999999999999999999999999 57999999999999999864
No 31
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.71 E-value=8.7e-17 Score=138.37 Aligned_cols=121 Identities=18% Similarity=0.355 Sum_probs=104.0
Q ss_pred ccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHH-HHhcccccccccCCccHHHHHhcCC
Q 011558 342 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA-LAKDKAYAQIHLDEMNIHQALQLGQ 420 (483)
Q Consensus 342 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~-l~~~~~~~~~~l~~~~v~~~l~~~~ 420 (483)
+++++|.+++.++.+++++.+|++.|.+++++++||+|++|+++|+++.+|+++ +...+.. .+.++.+
T Consensus 8 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~-----~~~~v~~------ 76 (138)
T 2yzi_A 8 PIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGLP-----YDIPVER------ 76 (138)
T ss_dssp BGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCCC-----TTSBGGG------
T ss_pred hHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCCc-----ccCCHHH------
Confidence 566779999999999999999999999999999999998899999999999974 4432211 1234444
Q ss_pred CCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 421 DANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 421 ~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+|.+++.++.+++++.+|+++|.+++++++ |+| ++|+++|+||.+||++++..
T Consensus 77 -------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd-~~g~~~Giit~~dil~~~~~ 129 (138)
T 2yzi_A 77 -------IMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIE-EEGKIVGIFTLSDLLEASRR 129 (138)
T ss_dssp -------TCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEE-ETTEEEEEEEHHHHHHHHHC
T ss_pred -------HhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EEC-CCCCEEEEEEHHHHHHHHHH
Confidence 677788999999999999999999999999 999 47999999999999998864
No 32
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.71 E-value=7.7e-17 Score=142.77 Aligned_cols=125 Identities=22% Similarity=0.228 Sum_probs=104.8
Q ss_pred ccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccc----cccCCccHHHHHh
Q 011558 342 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQ----IHLDEMNIHQALQ 417 (483)
Q Consensus 342 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~----~~l~~~~v~~~l~ 417 (483)
+++++|.++++++.+++++.+|+++|.+++++.+||+|++|+++|++|.+||++......... ....+.++.+
T Consensus 6 ~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~--- 82 (160)
T 2o16_A 6 KVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFE--- 82 (160)
T ss_dssp BGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHHH---
T ss_pred cHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHHH---
Confidence 567779889999999999999999999999999999998899999999999998654221100 0011345555
Q ss_pred cCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 418 LGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 418 ~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
+|.+++++|.+++++.+|+++|.+++++++||+| + |+++|+||.+||++++.
T Consensus 83 ----------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-g~lvGiit~~dil~~~~ 134 (160)
T 2o16_A 83 ----------VMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVA-K-DVLVGIITDSDFVTIAI 134 (160)
T ss_dssp ----------HSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEE-T-TEEEEEECHHHHHHHHH
T ss_pred ----------HhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEE-C-CEEEEEEEHHHHHHHHH
Confidence 6777899999999999999999999999999999 4 99999999999999875
No 33
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.71 E-value=6.6e-17 Score=138.23 Aligned_cols=120 Identities=18% Similarity=0.266 Sum_probs=104.2
Q ss_pred ccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCC
Q 011558 342 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 421 (483)
Q Consensus 342 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~ 421 (483)
+++++|.+++.++.+++++.+|++.|.+++.+++||+| +|+++|+++.+|+++....+... +.++.+
T Consensus 5 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~-----~~~v~~------- 71 (133)
T 2ef7_A 5 IVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKSL-----ETKAEE------- 71 (133)
T ss_dssp BGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCCT-----TCBGGG-------
T ss_pred cHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCCCc-----ccCHHH-------
Confidence 46777999999999999999999999999999999999 89999999999998866533111 234444
Q ss_pred CCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 422 ANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 422 ~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
+|.+++.++.+++++.+|+++|.+++.+++||+| ++|+++|+||..||++++.
T Consensus 72 ------~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~~g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 72 ------FMTASLITIREDSPITGALALMRQFNIRHLPVVD-DKGNLKGIISIRDITRAID 124 (133)
T ss_dssp ------TSEECCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHH
T ss_pred ------HcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEC-CCCeEEEEEEHHHHHHHHH
Confidence 6666788999999999999999999999999999 5799999999999999875
No 34
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.71 E-value=1.8e-17 Score=140.93 Aligned_cols=121 Identities=13% Similarity=0.166 Sum_probs=103.9
Q ss_pred ccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCC
Q 011558 342 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 421 (483)
Q Consensus 342 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~ 421 (483)
+++++|.+++.++.+++++.+|++.|.+++++++||+|+ |+++|++|.+|+++....+... ..++.+
T Consensus 6 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~~~~-----~~~v~~------- 72 (128)
T 3gby_A 6 TFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWPTV-----KEKLGE------- 72 (128)
T ss_dssp BGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSSCCT-----TCBCCG-------
T ss_pred EHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhCCcc-----cCcHHH-------
Confidence 567779999999999999999999999999999999998 9999999999998754322110 122333
Q ss_pred CCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 422 ANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 422 ~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+|.+++.++.+++++.+|+++|.+++.+++||+| ++|+++|+||.+||++++..
T Consensus 73 ------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd-~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 73 ------ELLETVRSYRPGEQLFDNLISVAAAKCSVVPLAD-EDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp ------GGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEEC-TTCBEEEEEEHHHHHHHHHT
T ss_pred ------HccCCCcEECCCCCHHHHHHHHHhCCCcEEEEEC-CCCCEEEEEEHHHHHHHHHh
Confidence 6777888999999999999999999999999999 57999999999999999854
No 35
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=4.6e-17 Score=144.93 Aligned_cols=123 Identities=20% Similarity=0.347 Sum_probs=105.1
Q ss_pred ccccccCC---CeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhc
Q 011558 342 RIGEANGR---PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 418 (483)
Q Consensus 342 ~v~~~m~~---~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~ 418 (483)
+++++|.+ +++++.+++++.+|+++|.+++++++||+|++|+++|++|.+||++.+..+.... .+.++.+
T Consensus 25 ~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~---~~~~v~~---- 97 (165)
T 3fhm_A 25 FVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAAS---LQQSVSV---- 97 (165)
T ss_dssp BHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGGG---GTSBGGG----
T ss_pred CHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCcc---ccCCHHH----
Confidence 56677874 7899999999999999999999999999999999999999999998655332111 1244554
Q ss_pred CCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 419 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 419 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+|.+++++|.+++++.+|+++|.+++++++||+| + |+++|+||..||++++..
T Consensus 98 ---------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 98 ---------AMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEE-N-GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp ---------TSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHTTC
T ss_pred ---------HhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHH
Confidence 6777889999999999999999999999999999 5 999999999999999864
No 36
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.70 E-value=7.8e-17 Score=142.52 Aligned_cols=122 Identities=17% Similarity=0.359 Sum_probs=103.1
Q ss_pred ccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCC
Q 011558 342 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 421 (483)
Q Consensus 342 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~ 421 (483)
+++++|.++ +++.+++++.+|+++|.+++++++||+|++|+++|++|.+||++....+.. ..+.++.+
T Consensus 18 ~v~~im~~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~----~~~~~v~~------- 85 (159)
T 3fv6_A 18 QVKDFQSIP-VVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQE----LTSVPVHI------- 85 (159)
T ss_dssp BGGGSCBCC-CEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCSC----TTTCBGGG-------
T ss_pred CHHHHcCCC-EEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccCc----ccCcCHHH-------
Confidence 456678875 599999999999999999999999999999999999999999986532211 11345555
Q ss_pred CCCCcccCCC--cceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCC---eEEEEEehHHHHHHHhc
Q 011558 422 ANPSLGFNGQ--RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSK---RVEGIISLSDVFRFLLG 482 (483)
Q Consensus 422 ~~~~~~~m~~--~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~---~l~GiIs~~DIl~~l~~ 482 (483)
+|.+ +++++.+++++.+|+++|.+++++++||+| ++| +++|+||.+||++++..
T Consensus 86 ------~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 86 ------IMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIK-DTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp ------TSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-ECSSSEEEEEEEEHHHHHHHHHH
T ss_pred ------HHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEe-CCCcceeEEEEEEHHHHHHHHHH
Confidence 6665 788999999999999999999999999999 467 99999999999999853
No 37
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.70 E-value=7.2e-17 Score=141.58 Aligned_cols=123 Identities=34% Similarity=0.581 Sum_probs=99.9
Q ss_pred CCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCCCCCCccc
Q 011558 349 RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGF 428 (483)
Q Consensus 349 ~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~~~~~~~~ 428 (483)
+++.++.+++++.+|+++|.+++++.+||+|++|+++|++|.+|+++....+.+... +.++.+++.... +
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~~~---~~~v~~~m~~~~-------~ 98 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNL---DVSVTKALQHRS-------H 98 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCCCT---TSBGGGGGGTCC-------H
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhhhh---cchHHHHHhhhh-------c
Confidence 578889999999999999999999999999988999999999999986654322111 244555322100 1
Q ss_pred CCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 429 NGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 429 m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
|.++++++.+++++.+|+++|.+++++++||+| ++|+++|+||.+||++++..
T Consensus 99 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~vGiit~~dil~~l~~ 151 (152)
T 2uv4_A 99 YFEGVLKCYLHETLETIINRLVEAEVHRLVVVD-ENDVVKGIVSLSDILQALVL 151 (152)
T ss_dssp HHHTCSEECTTSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHC-
T ss_pred ccCCCeEECCCCcHHHHHHHHHHcCCeEEEEEC-CCCeEEEEEEHHHHHHHHHh
Confidence 125788999999999999999999999999999 57999999999999999864
No 38
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.70 E-value=3.6e-17 Score=144.08 Aligned_cols=125 Identities=18% Similarity=0.259 Sum_probs=102.2
Q ss_pred ccccccC--CCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcC
Q 011558 342 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLG 419 (483)
Q Consensus 342 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~ 419 (483)
+++++|. +++.++.+++++.+|+++|.+++++++||+|++|+++|++|.+|+++....+.+....+.+.++.+
T Consensus 16 ~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~----- 90 (156)
T 3ctu_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVH----- 90 (156)
T ss_dssp TGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGG-----
T ss_pred HHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHH-----
Confidence 3556687 678999999999999999999999999999999999999999999986654322111111234444
Q ss_pred CCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 420 QDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 420 ~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+|.++++++.+++++.+|+++|.+++ ++|||| ++|+++|+||.+||++++..
T Consensus 91 --------~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd-~~g~~~Giit~~dil~~l~~ 142 (156)
T 3ctu_A 91 --------MTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD-AEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp --------GCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEEC-TTSBEEEEEETTHHHHHHHH
T ss_pred --------hccCCceeeCCCCcHHHHHHHHHHcC--eEEEEc-CCCeEEEEEEHHHHHHHHHH
Confidence 67778889999999999999999886 699999 57999999999999998853
No 39
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.70 E-value=6.9e-17 Score=141.21 Aligned_cols=118 Identities=12% Similarity=0.250 Sum_probs=103.4
Q ss_pred ccccccCC--CeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcC
Q 011558 342 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLG 419 (483)
Q Consensus 342 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~ 419 (483)
+++++|.+ +++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|+++....+.. ..+.++.+
T Consensus 29 ~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~----~~~~~v~~----- 99 (149)
T 3k2v_A 29 RVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGVD----MRDASIAD----- 99 (149)
T ss_dssp BGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSSC----CTTCBHHH-----
T ss_pred CHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCCC----cccCcHHH-----
Confidence 56777998 89999999999999999999999999999999999999999999987654321 12466777
Q ss_pred CCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHH
Q 011558 420 QDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFR 478 (483)
Q Consensus 420 ~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~ 478 (483)
+|.+++++|.+++++.+|+++|.+++++++||+|+ ++++|+||.+||++
T Consensus 100 --------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~~~~Giit~~dil~ 148 (149)
T 3k2v_A 100 --------VMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADG--DHLLGVVHMHDLLR 148 (149)
T ss_dssp --------HSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHTC
T ss_pred --------HcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecC--CEEEEEEEHHHhhc
Confidence 56567889999999999999999999999999993 49999999999975
No 40
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.70 E-value=2.9e-17 Score=140.48 Aligned_cols=122 Identities=16% Similarity=0.257 Sum_probs=103.5
Q ss_pred ccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHH-HHhcccccccccCCccHHHHHhcCC
Q 011558 342 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA-LAKDKAYAQIHLDEMNIHQALQLGQ 420 (483)
Q Consensus 342 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~-l~~~~~~~~~~l~~~~v~~~l~~~~ 420 (483)
+++++|.+++.++.+++++.+|+++|.+++.+++||+|++|+++|+++.+|++. +...+.. ..+.++.+
T Consensus 9 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~----~~~~~v~~------ 78 (133)
T 1y5h_A 9 TARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLD----PNTATAGE------ 78 (133)
T ss_dssp CHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCC----TTTSBHHH------
T ss_pred CHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCC----ccccCHHH------
Confidence 456678888999999999999999999999999999998899999999999984 4443211 12356777
Q ss_pred CCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 421 DANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 421 ~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+|.++++++.+++++.+|+++|.+++.+++||+| + |+++|+||.+||++++.+
T Consensus 79 -------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd-~-g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 79 -------LARDSIYYVDANASIQEMLNVMEEHQVRRVPVIS-E-HRLVGIVTEADIARHLPE 131 (133)
T ss_dssp -------HHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHTCC-
T ss_pred -------HhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHh
Confidence 4555788999999999999999999999999999 4 899999999999998754
No 41
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.70 E-value=1.1e-16 Score=138.58 Aligned_cols=126 Identities=25% Similarity=0.488 Sum_probs=101.4
Q ss_pred ccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCCCCCC
Q 011558 346 ANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPS 425 (483)
Q Consensus 346 ~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~~~~~ 425 (483)
+|.+++.++.+++++.+|++.|.+++++++||+|++|+++|+++.+|+++....+.+.. .+.++.+++.....
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~---~~~~v~~~m~~~~~---- 88 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYND---LSLSVGEALMRRSD---- 88 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC-------CCSBHHHHHHHCC-----
T ss_pred CCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhccccccc---CCccHHHHHhcCcc----
Confidence 37778999999999999999999999999999998899999999999998665432211 23577775532100
Q ss_pred cccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 426 LGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 426 ~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
-..++.++.+++++.+|+++|.+++++++||+| ++|+++|+||.+||++++..
T Consensus 89 ---~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd-~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 89 ---DFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD-DVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp --------CEECTTSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHHH
T ss_pred ---ccCCCeEECCCCcHHHHHHHHHHCCCCEEEEEC-CCCCEEEEEEHHHHHHHHHh
Confidence 001478999999999999999999999999999 57999999999999999864
No 42
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.69 E-value=7.3e-17 Score=141.00 Aligned_cols=125 Identities=21% Similarity=0.222 Sum_probs=102.9
Q ss_pred ccccccC--CCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccc-cccCCccHHHHHhc
Q 011558 342 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQ-IHLDEMNIHQALQL 418 (483)
Q Consensus 342 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~-~~l~~~~v~~~l~~ 418 (483)
+++++|. .+++++.+++++.+|++.|.+++++++||+|++|+++|++|.+||++......... ......++.+
T Consensus 16 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~---- 91 (150)
T 3lqn_A 16 FVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQ---- 91 (150)
T ss_dssp BHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGG----
T ss_pred ChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHHH----
Confidence 4566688 45899999999999999999999999999999999999999999998664321110 0111233443
Q ss_pred CCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 419 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 419 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+|.++++++.+++++.+|+++|.++++ +|||| ++|+++|+||.+||++++..
T Consensus 92 ---------~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd-~~g~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 92 ---------VMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVN-EDGYFEGILTRRAILKLLNK 143 (150)
T ss_dssp ---------TCBSSCCEEETTCBHHHHHHHHHHCSE--EEEEC-TTCBEEEEEEHHHHHHHHHH
T ss_pred ---------HhcCCCceeCCCCCHHHHHHHHHhCCE--EEEEC-CCCcEEEEEEHHHHHHHHHH
Confidence 777789999999999999999999987 99999 57999999999999998853
No 43
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.69 E-value=2e-16 Score=140.10 Aligned_cols=132 Identities=14% Similarity=0.221 Sum_probs=104.1
Q ss_pred ccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcC--CCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcC
Q 011558 342 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDD--NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLG 419 (483)
Q Consensus 342 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~ 419 (483)
+++++|.++++++.+++++.+|+++|.+++++++||+|+ +|+++|++|..|++.....+..........++.+++...
T Consensus 14 ~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~~m~~~ 93 (164)
T 2pfi_A 14 RVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDILARG 93 (164)
T ss_dssp BHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHHHHHHTT
T ss_pred CHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhhhhhccc
Confidence 566779999999999999999999999999999999996 799999999999998664332111111235667755431
Q ss_pred CCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 420 QDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 420 ~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
. .....+++|.+++++.+|+++|.+++++++||+| +|+++|+||.+||++++.+
T Consensus 94 ~-------~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~g~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 94 C-------PTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS--RGRAVGCVSWVEMKKAISN 147 (164)
T ss_dssp C-------CCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHHHHHHH
T ss_pred c-------cccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE--CCEEEEEEEHHHHHHHHHh
Confidence 1 0001167899999999999999999999999999 4999999999999998753
No 44
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.68 E-value=1.6e-16 Score=144.00 Aligned_cols=124 Identities=19% Similarity=0.279 Sum_probs=105.3
Q ss_pred cccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCC
Q 011558 341 PRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQ 420 (483)
Q Consensus 341 ~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~ 420 (483)
.+++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|+++.+||+.......... ...++.+
T Consensus 9 ~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~~---~~~~v~~------ 79 (184)
T 1pvm_A 9 MRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKP---DEVPIRL------ 79 (184)
T ss_dssp CBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCCCG---GGSBGGG------
T ss_pred cCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccCc---ccCCHHH------
Confidence 3567779999999999999999999999999999999998899999999999988654211100 1234444
Q ss_pred CCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 421 DANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 421 ~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
+|.++++++.+++++.+|+++|.+++++++||+| ++|+++|+||..||++++.
T Consensus 80 -------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 80 -------VMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVD-DPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp -------TSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEEC-TTCCEEEEEEHHHHTTTSC
T ss_pred -------HhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHHHHHH
Confidence 6777889999999999999999999999999999 5799999999999998764
No 45
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.68 E-value=5.4e-17 Score=146.14 Aligned_cols=138 Identities=22% Similarity=0.363 Sum_probs=102.3
Q ss_pred ccccccCC--CeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhccccc--------c--cccCC
Q 011558 342 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYA--------Q--IHLDE 409 (483)
Q Consensus 342 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~--------~--~~l~~ 409 (483)
+++++|.+ +++++.+++++.+|+++|.+++++++||+|++|+++|+++.+||+++....... . ..+..
T Consensus 5 ~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (180)
T 3sl7_A 5 TVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKT 84 (180)
T ss_dssp BHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CCCS
T ss_pred eHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchhhh
Confidence 45677887 789999999999999999999999999999999999999999998522100000 0 00000
Q ss_pred c-cHHHHHhcCCCCCCCcc-cCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 410 M-NIHQALQLGQDANPSLG-FNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 410 ~-~v~~~l~~~~~~~~~~~-~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
. .....+.. ....+.+ +|.++++++.+++++.+|+++|.+++++++||+| ++|+++|+||.+||++++..
T Consensus 85 ~~~~~~~~~~--~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 85 FNELQKLISK--TYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVD-ADGKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp HHHHHHHHHT--TTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEEC-TTCBEEEEEEHHHHHHHHHH
T ss_pred hHHHHHHHhc--cccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEEC-CCCeEEEEEEHHHHHHHHHH
Confidence 0 00000000 0111222 6777788999999999999999999999999999 57999999999999998853
No 46
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.68 E-value=2e-16 Score=135.61 Aligned_cols=121 Identities=12% Similarity=0.244 Sum_probs=102.7
Q ss_pred ccccccC---CCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHH-HHhcccccccccCCccHHHHHh
Q 011558 342 RIGEANG---RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA-LAKDKAYAQIHLDEMNIHQALQ 417 (483)
Q Consensus 342 ~v~~~m~---~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~-l~~~~~~~~~~l~~~~v~~~l~ 417 (483)
+++++|. +++.++.+++++.+|++.|.+++++++||+| +|+++|+++.+|+++ +...+.. ..+.++.+
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~----~~~~~v~~--- 78 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDKP----VKDTQVKE--- 78 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSSC----GGGSBGGG---
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCCC----cccCCHHH---
Confidence 4566788 8899999999999999999999999999999 899999999999986 3332210 11244444
Q ss_pred cCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 418 LGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 418 ~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+|.+++.++.+++++.+|+++|.+++++++||+| +|+++|+||.+||++++.+
T Consensus 79 ----------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 79 ----------IMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD--DGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp ----------TSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHC
T ss_pred ----------hccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe--CCEEEEEEEHHHHHHHHHh
Confidence 6777889999999999999999999999999999 4999999999999998864
No 47
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.68 E-value=3.4e-16 Score=138.01 Aligned_cols=125 Identities=9% Similarity=0.142 Sum_probs=104.1
Q ss_pred ccccccCCCeeEecCCCCHHHHHHHHHhCCCCE-EEEEcCCCcEEEEEeHHHHHHHHhccc---ccc--------cccCC
Q 011558 342 RIGEANGRPFAMLRPTASLGSALALLVQADVSS-IPIVDDNDSLLDIYSRSDITALAKDKA---YAQ--------IHLDE 409 (483)
Q Consensus 342 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~-lpVvd~~g~lvGiit~~di~~l~~~~~---~~~--------~~l~~ 409 (483)
+++++|.+++.++.+++++.+|+++|.+++++. +||+|++ +++|++|..||++...... ... ....+
T Consensus 17 ~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (157)
T 1o50_A 17 DVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMKRLIA 95 (157)
T ss_dssp HHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHHHCCCC-------CCCCCSS
T ss_pred cHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHHHHcC
Confidence 567779999999999999999999999999999 9999977 9999999999998543110 000 00112
Q ss_pred ccHHHHHhcCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 410 MNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 410 ~~v~~~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
.++.+ +|.+ ++++.+++++.+|+++|.+++++++||+| ++|+++|+||.+||++++..
T Consensus 96 ~~v~~-------------im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 96 KNASE-------------IMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVD-EKGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp CBHHH-------------HCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHHH
T ss_pred CcHHH-------------HcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEc-CCCEEEEEEEHHHHHHHHHH
Confidence 34444 6777 88999999999999999999999999999 57999999999999998864
No 48
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.67 E-value=3e-16 Score=138.14 Aligned_cols=125 Identities=18% Similarity=0.199 Sum_probs=102.7
Q ss_pred ccccccCC--CeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhccc-ccccccCCccHHHHHhc
Q 011558 342 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKA-YAQIHLDEMNIHQALQL 418 (483)
Q Consensus 342 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~-~~~~~l~~~~v~~~l~~ 418 (483)
+++++|.+ ++.++.+++++.+|+++|.+++++++||+|++|+++|++|..|+++...... +........++.+
T Consensus 12 ~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~---- 87 (157)
T 2emq_A 12 TVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKVEE---- 87 (157)
T ss_dssp BSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBGGG----
T ss_pred cHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHhcCCcHHH----
Confidence 45666876 7889999999999999999999999999998899999999999998654321 1000111233443
Q ss_pred CCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 419 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 419 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+|.++++++.+++++.+|+++|.++++ +|||| ++|+++|+||.+||++++..
T Consensus 88 ---------~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd-~~g~~~Giit~~dil~~~~~ 139 (157)
T 2emq_A 88 ---------VMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEN-DDGYFAGIFTRREVLKQLNK 139 (157)
T ss_dssp ---------TCBCCCCEEETTSBHHHHHHHHHHSSE--EEEEC-SSSSEEEEEEHHHHHHHHHH
T ss_pred ---------HhCCCCceecCCCcHHHHHHHHhhCCE--EEEEc-CCCeEEEEEEHHHHHHHHHH
Confidence 677789999999999999999999987 99999 57999999999999998753
No 49
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.67 E-value=3.3e-16 Score=140.65 Aligned_cols=118 Identities=15% Similarity=0.189 Sum_probs=100.5
Q ss_pred ccccccC--CCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCC-CcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhc
Q 011558 342 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 418 (483)
Q Consensus 342 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~ 418 (483)
+++++|. ++++++.+++++.+|+++|.+++++++||+|++ |+++|+++.+||+.....+. ..++.
T Consensus 37 ~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~-------~~~v~----- 104 (173)
T 3ocm_A 37 SIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG-------RVRRN----- 104 (173)
T ss_dssp CSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-------SCCGG-----
T ss_pred CHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCC-------cchhH-----
Confidence 4566686 468899999999999999999999999999976 89999999999998654321 12222
Q ss_pred CCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 419 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 419 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
|.++++++.+++++.+|+++|.+++++++||+| ++|+++|+||+.||++.+++
T Consensus 105 ----------~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvd-e~g~lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 105 ----------RLRDPIIVHESIGILRLMDTLKRSRGQLVLVAD-EFGAIEGLVTPIDVFEAIAG 157 (173)
T ss_dssp ----------GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEEC-TTCCEEEEECHHHHHHHHHC
T ss_pred ----------hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEe-CCCCEEEEEeHHHHHHHHhC
Confidence 223678999999999999999999999999999 57999999999999999976
No 50
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.67 E-value=2.6e-16 Score=139.01 Aligned_cols=124 Identities=19% Similarity=0.217 Sum_probs=103.5
Q ss_pred ccccccCC--CeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhccc-ccccccCCccHHHHHhc
Q 011558 342 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKA-YAQIHLDEMNIHQALQL 418 (483)
Q Consensus 342 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~-~~~~~l~~~~v~~~l~~ 418 (483)
+++++|.+ ++.++.+++++.+|+++|.+++++++||+|++|+++|++|..||+....... +........++.+
T Consensus 15 ~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~---- 90 (159)
T 1yav_A 15 TVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEE---- 90 (159)
T ss_dssp BHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHH----
T ss_pred hHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHHH----
Confidence 45566877 8899999999999999999999999999998899999999999998665321 1111122356666
Q ss_pred CCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 419 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 419 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
+|.++++++.+++++.+|+++|.++++ +||+| ++|+++|+||++||++++.
T Consensus 91 ---------~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd-~~g~~vGiit~~dil~~~~ 141 (159)
T 1yav_A 91 ---------VMLTDIPRLHINDPIMKGFGMVINNGF--VCVEN-DEQVFEGIFTRRVVLKELN 141 (159)
T ss_dssp ---------HSBCSCCEEETTSBHHHHHHHTTTCSE--EEEEC-TTCBEEEEEEHHHHHHHHH
T ss_pred ---------hcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEe-CCCeEEEEEEHHHHHHHHH
Confidence 666678999999999999999999987 99999 4799999999999999875
No 51
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.66 E-value=3.7e-16 Score=137.65 Aligned_cols=123 Identities=13% Similarity=0.261 Sum_probs=104.3
Q ss_pred cccccccC------CCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHH
Q 011558 341 PRIGEANG------RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQ 414 (483)
Q Consensus 341 ~~v~~~m~------~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~ 414 (483)
.+++++|. +++.++.+++++.+|+++|.+++++++||++ +|+++|+++.+|+++.+...... ..+.++.+
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~---~~~~~v~~ 82 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQERS---SKATRVEE 82 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGTCC---SSSCBHHH
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhccCC---ccccCHHH
Confidence 35677787 5679999999999999999999999999965 89999999999999865432211 12466777
Q ss_pred HHhcCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 415 ALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 415 ~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+|.++++++.+++++.+|+++|.+++++++||+| +|+++|+||.+||++++..
T Consensus 83 -------------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 83 -------------IMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD--GGKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp -------------HSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHT
T ss_pred -------------HcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHHH
Confidence 5666788999999999999999999999999999 4999999999999999864
No 52
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.66 E-value=6e-16 Score=142.84 Aligned_cols=116 Identities=16% Similarity=0.207 Sum_probs=102.6
Q ss_pred ccccccCCCeeEecCCCCHHHHHHHHHhC---CCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhc
Q 011558 342 RIGEANGRPFAMLRPTASLGSALALLVQA---DVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 418 (483)
Q Consensus 342 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~---~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~ 418 (483)
+++++|+++++++.+++++.+|++.|.+. +++.+||+|++|+++|+++.+|++... .+.++.+
T Consensus 55 ~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~----------~~~~v~~---- 120 (205)
T 3kxr_A 55 EIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKHE----------PHEPLIS---- 120 (205)
T ss_dssp CGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTSC----------TTSBGGG----
T ss_pred hHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhCC----------CcchHHH----
Confidence 56777999999999999999999999987 789999999999999999999986421 1234454
Q ss_pred CCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 419 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 419 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
+|.++++++.+++++.+|+++|.+++++++|||| ++|+++|+||..||++.+.
T Consensus 121 ---------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD-~~g~lvGiIT~~Dil~~i~ 173 (205)
T 3kxr_A 121 ---------LLSEDSRALTANTTLLDAAEAIEHSREIELPVID-DAGELIGRVTLRAATALVR 173 (205)
T ss_dssp ---------GCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred ---------HhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEc-CCCeEEEEEEHHHHHHHHH
Confidence 7877899999999999999999999999999999 5799999999999999874
No 53
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.65 E-value=1.4e-16 Score=142.51 Aligned_cols=156 Identities=17% Similarity=0.239 Sum_probs=113.2
Q ss_pred HHHHHHHHHhhccccccccCCCCccEEEEccCcCHHHHHHHHHHcCCCeeeceeCCCCceeEEeeHHHHHHHHHHhccCC
Q 011558 142 QLSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNG 221 (483)
Q Consensus 142 ~~~~~~~~~fl~~~~~~d~~p~s~kvi~l~~~~~v~~A~~~l~e~~i~s~PV~d~~~~~~vGilt~~D~i~il~~~~~~~ 221 (483)
+..++.+...|++.++.|+| +.++++++.+.|+.+|++.|.++++.++||+|.+ ++++|++|..|++..+.....
T Consensus 5 ~~~~~~~~~~l~~~~V~diM--~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dll~~~~~~~~-- 79 (170)
T 4esy_A 5 QARRRAIARAIRQVPIRDIL--TSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQN-GHLVGIITESDFLRGSIPFWI-- 79 (170)
T ss_dssp HHHHHHHHHHHHTSBGGGGC--CSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTT-SCEEEEEEGGGGGGGTCCTTH--
T ss_pred HHHHHHHHHHHcCCCHHHhc--CCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCC-ccEEEEEEHHHHHHHHhhccc--
Confidence 34567788889999999999 5689999999999999999999999999999975 569999999998753311000
Q ss_pred CCCCHHH-Hhh-ccHHHHHHHHhhhhccccCCCCCCCCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcce
Q 011558 222 SNLTEEE-LET-HTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQE 299 (483)
Q Consensus 222 ~~l~~~~-l~~-~~i~~~~~~~~~~~~~~~~d~~g~~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~ 299 (483)
....+ +.. ............... ..++.+|.++++++.+++++.+|+++|.+++++++||+++ | +
T Consensus 80 --~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~----g---~ 146 (170)
T 4esy_A 80 --YEASEILSRAIPAPEVEHLFETGRK----LTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQD----G---V 146 (170)
T ss_dssp --HHHHHHHTTTSCHHHHHHHHHHHTT----CBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEET----T---E
T ss_pred --cchhhhhhhccchhhHHhhhccccc----cchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEEC----C---E
Confidence 00000 000 001111111111000 0011257889999999999999999999999999999953 5 8
Q ss_pred EEEEechhhHHHHHHh
Q 011558 300 ILYLASLSDILKCICR 315 (483)
Q Consensus 300 l~Giit~~dIl~~l~~ 315 (483)
++|+||.+||++++..
T Consensus 147 lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 147 PVGIVTRRDLLKLLLL 162 (170)
T ss_dssp EEEEEEHHHHTTTSCC
T ss_pred EEEEEEHHHHHHHHHh
Confidence 9999999999998753
No 54
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.65 E-value=3e-16 Score=138.32 Aligned_cols=114 Identities=11% Similarity=0.288 Sum_probs=99.0
Q ss_pred ccccccCC--CeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCC-cEEEEEeHHHHHHHHhcccccccccCCccHHHHHhc
Q 011558 342 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDND-SLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 418 (483)
Q Consensus 342 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g-~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~ 418 (483)
+++++|.+ +++++.+++++.+|+++|.+++++++||+|+++ +++|++|.+|+++....+ .+.++.+
T Consensus 39 ~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~-------~~~~v~~---- 107 (156)
T 3oi8_A 39 EVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP-------EQFHLKS---- 107 (156)
T ss_dssp BGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG-------GGCCHHH----
T ss_pred CHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC-------CcccHHH----
Confidence 56777986 789999999999999999999999999999874 999999999998754432 1356666
Q ss_pred CCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHH
Q 011558 419 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVF 477 (483)
Q Consensus 419 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl 477 (483)
+|. +++++.+++++.+|+++|.+++++++||+| ++|+++|+||+.||+
T Consensus 108 ---------im~-~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd-~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 108 ---------ILR-PAVFVPEGKSLTALLKEFREQRNHMAIVID-EYGGTSGLVTFEDII 155 (156)
T ss_dssp ---------HCB-CCCEEETTSBHHHHHHHHHHTTCCEEEEEC-TTSSEEEEEEHHHHC
T ss_pred ---------HcC-CCEEECCCCCHHHHHHHHHhcCCeEEEEEC-CCCCEEEEEEHHHhc
Confidence 553 478999999999999999999999999999 579999999999986
No 55
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.64 E-value=1.7e-15 Score=143.84 Aligned_cols=197 Identities=11% Similarity=0.085 Sum_probs=126.7
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCC---CCCc-------
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSS---SSLP------- 325 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~---~~~~------- 325 (483)
+|.++++++.+++++.+|+++|.+++++++||+|+ +| +++|++|..|+++++........ ....
T Consensus 12 im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~---~~---~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~~~ 85 (245)
T 3l2b_A 12 LEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADG---NN---HLLGMLSTSNITATYMDIWDSNILAKSATSLDNILDT 85 (245)
T ss_dssp SCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECT---TC---BEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHHHH
T ss_pred hcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---EEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHHHH
Confidence 57788999999999999999999999999999964 45 89999999999998754321100 0000
Q ss_pred ----------cccccccccccccc-ccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCC------------
Q 011558 326 ----------ILQQPVSSIQLGTW-VPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDND------------ 382 (483)
Q Consensus 326 ----------~~~~~v~~l~i~~~-~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g------------ 382 (483)
......+.+.++.. ...+.+.+....+.+-.+ ..+++..+.+.+++++++++...
T Consensus 86 l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgd--r~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~~ 163 (245)
T 3l2b_A 86 LSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGD--RAEIQAELIELKVSLLIVTGGHTPSKEIIELAKKN 163 (245)
T ss_dssp TTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECS--CHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHHH
T ss_pred hCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECC--CHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHc
Confidence 00000011111111 112233344444444444 48889999999999998886321
Q ss_pred cEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCCCCCCcccCC-CcceEEeCCCCHHHHHHHHHcCCCCEEEEEe
Q 011558 383 SLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNG-QRCQMCLRSDPLHKVMERLANPGVRRLVIVE 461 (483)
Q Consensus 383 ~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~~~~~~~~m~-~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd 461 (483)
.+-.+.+..|.......- ....++.+ +|. +++.++.+++++.+|+++|.+++++++||||
T Consensus 164 ~~~~i~t~~d~~~~~~~~------~~~~~v~~-------------im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd 224 (245)
T 3l2b_A 164 NITVITTPHDSFTASRLI------VQSLPVDY-------------VMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVID 224 (245)
T ss_dssp TCEEEECSSCHHHHHHHG------GGGSBHHH-------------HSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEEC
T ss_pred CCeEEEeCCChHHHHHHH------hcCCceee-------------EecCCccEEECCCCcHHHHHHHHHhcCCceEEEEc
Confidence 122233333322211100 00234444 777 7899999999999999999999999999999
Q ss_pred CCCCeEEEEEehHHHHHHH
Q 011558 462 AGSKRVEGIISLSDVFRFL 480 (483)
Q Consensus 462 ~~~~~l~GiIs~~DIl~~l 480 (483)
++|+++|+||++|++++.
T Consensus 225 -~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 225 -ENNKVVGSIARFHLISTH 242 (245)
T ss_dssp -TTCBEEEEEECC------
T ss_pred -CCCeEEEEEEHHHhhchh
Confidence 579999999999999864
No 56
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.63 E-value=7.8e-16 Score=143.00 Aligned_cols=120 Identities=14% Similarity=0.200 Sum_probs=103.9
Q ss_pred ccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHh
Q 011558 338 TWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQ 417 (483)
Q Consensus 338 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~ 417 (483)
+|...++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|+++... +.++.+
T Consensus 10 ~~~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~----------~~~v~~--- 76 (213)
T 1vr9_A 10 HHHMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLDL----------DSSVFN--- 76 (213)
T ss_dssp ---CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCT----------TSBSGG---
T ss_pred ccccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcC----------CCcHHH---
Confidence 4556777889999999999999999999999999999999998899999999999875322 133444
Q ss_pred cCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 418 LGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 418 ~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
+|.++++++.+++++.+|+++|.+++++++||+| ++|+++|+||.+||++.+.
T Consensus 77 ----------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~lvGiit~~Dil~~~~ 129 (213)
T 1vr9_A 77 ----------KVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVD-EEMRLKGAVSLHDFLEALI 129 (213)
T ss_dssp ----------GCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEEC-TTCBEEEEEEHHHHHHHHH
T ss_pred ----------HccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEc-CCCEEEEEEEHHHHHHHHH
Confidence 6777889999999999999999999999999999 4799999999999999874
No 57
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.63 E-value=1.1e-15 Score=138.26 Aligned_cols=138 Identities=14% Similarity=0.181 Sum_probs=101.9
Q ss_pred ccccccCCC----eeEe--cCCCCHHHHHHHHHhCCCCEEEEE--cCCCcEEEEEeHHHHHHHHhcccccccccCCccHH
Q 011558 342 RIGEANGRP----FAML--RPTASLGSALALLVQADVSSIPIV--DDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIH 413 (483)
Q Consensus 342 ~v~~~m~~~----~~~v--~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~ 413 (483)
+++++|.+. ++++ .+++++.+|+++|.+++++++||+ |++|+++|+|+..|+++...........+......
T Consensus 12 ~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~ 91 (185)
T 2j9l_A 12 LAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSII 91 (185)
T ss_dssp BHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCTTCEE
T ss_pred cHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCcccccee
Confidence 456668776 7788 999999999999999999999999 78899999999999998654321000000000000
Q ss_pred HHH------hcCCCCCCCc-ccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 414 QAL------QLGQDANPSL-GFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 414 ~~l------~~~~~~~~~~-~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
.+. ........+. ++|.++++++.+++++.+|+++|.+++++++||+| +|+++|+||++||++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd--~g~~vGiit~~dll~~l~ 164 (185)
T 2j9l_A 92 YFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH--NGRLLGIITKKDVLKHIA 164 (185)
T ss_dssp ECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHH
T ss_pred ecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE--CCEEEEEEEHHHHHHHHH
Confidence 000 0000001111 27777899999999999999999999999999999 599999999999999875
No 58
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.63 E-value=1.5e-15 Score=141.09 Aligned_cols=154 Identities=14% Similarity=0.157 Sum_probs=98.9
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (483)
.+.++++++.+++++.+|+++|.+++++.+||+++ ++ +++|++|.+|+++.+. ..
T Consensus 18 ~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~---~~---~l~Givt~~dl~~~~~-------------~~------ 72 (213)
T 1vr9_A 18 WVTQDFPMVEESATVRECLHRMRQYQTNECIVKDR---EG---HFRGVVNKEDLLDLDL-------------DS------ 72 (213)
T ss_dssp GCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECT---TS---BEEEEEEGGGGTTSCT-------------TS------
T ss_pred hhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcC---CC---EEEEEEEHHHHHhhcC-------------CC------
Confidence 56788999999999999999999999999999954 35 8999999999876431 12
Q ss_pred ccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHH
Q 011558 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQA 415 (483)
Q Consensus 336 i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~ 415 (483)
.++++|.+++.++.+++++.+|+++|.+++++.+||+|++|+++|++|.+|+++...... ...+.
T Consensus 73 ------~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~---------~~~~~ 137 (213)
T 1vr9_A 73 ------SVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEAL---------AMDVP 137 (213)
T ss_dssp ------BSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSC---------C----
T ss_pred ------cHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHh---------cCCCC
Confidence 345569889999999999999999999999999999998899999999999998654221 11110
Q ss_pred HhcCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEe
Q 011558 416 LQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVE 461 (483)
Q Consensus 416 l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd 461 (483)
... + .+.+.....++.+|.+.|.+++++.++|++
T Consensus 138 ~~~---------l---~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~ 171 (213)
T 1vr9_A 138 GIR---------F---SVLLEDKPGELRKVVDALALSNINILSVIT 171 (213)
T ss_dssp ----------------------------------------------
T ss_pred cEE---------E---EEEeCCCCccHHHHHHHHHHCCCcEEEEEE
Confidence 000 0 011123344599999999999999999886
No 59
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.62 E-value=5.1e-15 Score=140.32 Aligned_cols=139 Identities=17% Similarity=0.310 Sum_probs=105.0
Q ss_pred cccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCC--CcEEEEEeHHHHHHHHhccc--ccc------------
Q 011558 341 PRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDN--DSLLDIYSRSDITALAKDKA--YAQ------------ 404 (483)
Q Consensus 341 ~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~--g~lvGiit~~di~~l~~~~~--~~~------------ 404 (483)
..|+++|.++++++.+++++.+|.++|.+++++++||||++ ++++|+|+++||++++.... ...
T Consensus 13 ~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~~~~ 92 (250)
T 2d4z_A 13 IQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEADEEG 92 (250)
T ss_dssp CBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBCCC-
T ss_pred CChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcccccc
Confidence 36788899999999999999999999999999999999963 68999999999998654221 000
Q ss_pred ----------------cccCC---------------------------------------------------------cc
Q 011558 405 ----------------IHLDE---------------------------------------------------------MN 411 (483)
Q Consensus 405 ----------------~~l~~---------------------------------------------------------~~ 411 (483)
..+.+ ++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 172 (250)
T 2d4z_A 93 RNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEEMLT 172 (250)
T ss_dssp --------------------------------------------------------------------------CCSCCB
T ss_pred cccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccccccC
Confidence 00000 00
Q ss_pred HHHHHh--cCCCCCCCc---c-cCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 412 IHQALQ--LGQDANPSL---G-FNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 412 v~~~l~--~~~~~~~~~---~-~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
..+... .. .-..++ . +|...++++.++++|.+|..+|...|++++||++ .|+|+||||+.||++++.+
T Consensus 173 ~~~~~~~~~~-~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~--~GrLVGIVTrkDl~kai~~ 246 (250)
T 2d4z_A 173 LEEIYRWEQR-EKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS--MGKLVGVVALAEIQAAIEG 246 (250)
T ss_dssp HHHHHHHHHH-HTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHC
T ss_pred hhhhhhHHHH-hcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE--CCEEEEEEEHHHHHHHHHH
Confidence 000000 00 001122 1 5788899999999999999999999999999998 5999999999999999864
No 60
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.62 E-value=7.5e-16 Score=135.89 Aligned_cols=119 Identities=18% Similarity=0.209 Sum_probs=97.8
Q ss_pred CCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccc
Q 011558 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (483)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (483)
+..+++++.+++|+.+|+++|.+++++++||+|+ +| +++|++|.+|+++++....... ......
T Consensus 23 P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~---~~---~lvGiit~~Di~~~~~~~~~~~---~~~~~~------- 86 (156)
T 3k6e_A 23 PAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD---EK---QFVGTIGLRDIMAYQMEHDLSQ---EIMADT------- 86 (156)
T ss_dssp ETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC----C---BEEEEEEHHHHHHHHHHHTCCH---HHHTTS-------
T ss_pred chhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC---CC---cEEEEEEecchhhhhhhccccc---cccccc-------
Confidence 3567899999999999999999999999999954 45 8999999999999876532110 011112
Q ss_pred cccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 337 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 337 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
+++++|.+++.++.+++++.+|+++|.+++ .+||+|++|+++|+||++||++.+.
T Consensus 87 -----~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~ 141 (156)
T 3k6e_A 87 -----DIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp -----BGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred -----CHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHH
Confidence 455669999999999999999999998766 4999999999999999999998664
No 61
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.60 E-value=4.8e-15 Score=129.19 Aligned_cols=115 Identities=14% Similarity=0.143 Sum_probs=98.7
Q ss_pred CCCC--CeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccc
Q 011558 256 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 333 (483)
Q Consensus 256 ~~~~--~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~ 333 (483)
+|.+ +++++.+++++.+|++.|.+++++++||+++ +.| +++|++|.+|+++.+.... ..
T Consensus 28 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~~----------~~---- 88 (148)
T 3lv9_A 28 IMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRK--NKD---DILGFVHIRDLYNQKINEN----------KI---- 88 (148)
T ss_dssp TSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESS--STT---SEEEEEEHHHHHHHHHHHS----------CC----
T ss_pred ccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHhcCC----------Cc----
Confidence 4555 8899999999999999999999999999953 225 8999999999998875431 12
Q ss_pred ccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 334 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 334 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
.++++| +++.++.+++++.+|+++|.+++.+.+||+|++|+++|++|..|+++.+.
T Consensus 89 --------~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 89 --------ELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIV 144 (148)
T ss_dssp --------CGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHH
T ss_pred --------cHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 344558 78899999999999999999999999999999999999999999998654
No 62
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.59 E-value=8.9e-15 Score=134.96 Aligned_cols=122 Identities=15% Similarity=0.125 Sum_probs=104.8
Q ss_pred ccCCCCCCCCCCCeEEeCCCCCHHHHHHHHHhC---CCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCC
Q 011558 248 RQMDGNGRPCPRPLVQAGPYDSLKEVALKILQN---KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSL 324 (483)
Q Consensus 248 ~~~d~~g~~~~~~~v~v~~~~sl~~a~~~m~~~---~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~ 324 (483)
+..+.+|.+|.++++++.+++|+.+|++.|.++ +++.+||+++ ++ +++|++|.+|++...
T Consensus 51 ~~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~---~~---~lvGivt~~dll~~~----------- 113 (205)
T 3kxr_A 51 YSENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDE---AD---KYLGTVRRYDIFKHE----------- 113 (205)
T ss_dssp SCTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECT---TC---BEEEEEEHHHHTTSC-----------
T ss_pred CCcchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcC---CC---eEEEEEEHHHHHhCC-----------
Confidence 556677788999999999999999999999987 8899999954 45 899999999986420
Q ss_pred cccccccccccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcc
Q 011558 325 PILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 400 (483)
Q Consensus 325 ~~~~~~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~ 400 (483)
... .++++|.+++.++.+++++.+|+++|.+++++.+||+|++|+++|+||..|++..+.+.
T Consensus 114 --~~~------------~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e 175 (205)
T 3kxr_A 114 --PHE------------PLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREH 175 (205)
T ss_dssp --TTS------------BGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred --Ccc------------hHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 112 34555988999999999999999999999999999999999999999999999977643
No 63
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.59 E-value=1.1e-14 Score=130.40 Aligned_cols=117 Identities=10% Similarity=0.070 Sum_probs=99.8
Q ss_pred CCCC--CCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccc
Q 011558 255 RPCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVS 332 (483)
Q Consensus 255 ~~~~--~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~ 332 (483)
.+|. .+++++.+++++.+|++.|.+++++++||+++ ..+ +++|++|.+|+++.+.... ..
T Consensus 46 diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~~----------~~--- 107 (172)
T 3lhh_A 46 SLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRN--NVD---DMVGIISAKQLLSESIAGE----------RL--- 107 (172)
T ss_dssp TTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESS--STT---SEEEEEEHHHHHHHHHTTC----------CC---
T ss_pred HhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---eEEEEEEHHHHHHHHhhcC----------cc---
Confidence 3566 67889999999999999999999999999954 225 8999999999998774320 12
Q ss_pred cccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 011558 333 SIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (483)
Q Consensus 333 ~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~ 399 (483)
.++++| +++.++.+++++.+|+++|.+++++.+||+|++|+++|+||+.||++.+..
T Consensus 108 ---------~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 108 ---------ELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp ---------CGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred ---------cHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhC
Confidence 345558 888999999999999999999999999999999999999999999986653
No 64
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.58 E-value=9.2e-15 Score=122.70 Aligned_cols=114 Identities=20% Similarity=0.331 Sum_probs=99.1
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (483)
+|.++++++.+++++.+|++.|.+++.+.+||+++ +| +++|++|.+|+++++.... .
T Consensus 6 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~G~vt~~dl~~~~~~~~-----------~------ 62 (122)
T 3kpb_A 6 ILSKPPITAHSNISIMEAAKILIKHNINHLPIVDE---HG---KLVGIITSWDIAKALAQNK-----------K------ 62 (122)
T ss_dssp HCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECT---TS---BEEEEECHHHHHHHHHTTC-----------C------
T ss_pred hhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECC---CC---CEEEEEEHHHHHHHHHhcc-----------c------
Confidence 35678889999999999999999999999999964 45 8999999999998775311 1
Q ss_pred ccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 336 i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
.++++|.+++.++.+++++.+|+++|.+++.+.+||+|++|+++|++|..|+++.+.
T Consensus 63 ------~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 63 ------TIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG 119 (122)
T ss_dssp ------BGGGTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC
T ss_pred ------CHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhh
Confidence 244558888999999999999999999999999999998899999999999998664
No 65
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.57 E-value=1.2e-14 Score=123.71 Aligned_cols=116 Identities=12% Similarity=0.140 Sum_probs=96.6
Q ss_pred CCC--CCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccc
Q 011558 256 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 333 (483)
Q Consensus 256 ~~~--~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~ 333 (483)
+|. .+++++.+++++.+|++.|.+++++++||+++ +.| +++|++|.+|+++.+.... ...
T Consensus 11 iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~~Givt~~dl~~~~~~~~---------~~~---- 72 (130)
T 3i8n_A 11 VMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSE--QKD---NIIGFVHRLELFKMQQSGS---------GQK---- 72 (130)
T ss_dssp TSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESS--STT---CEEEECCHHHHHHHHHTTT---------TTS----
T ss_pred CCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---cEEEEEEHHHHHHHHhcCC---------CcC----
Confidence 455 56779999999999999999999999999953 225 8999999999998875321 012
Q ss_pred ccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 334 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 334 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
.++++| +++.++.+++++.+|+++|.+++++.+||+|++|+++|++|..|+++.+.
T Consensus 73 --------~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 73 --------QLGAVM-RPIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp --------BHHHHS-EECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred --------CHHHHh-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHc
Confidence 234457 45789999999999999999999999999999999999999999998553
No 66
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.57 E-value=5.4e-15 Score=143.63 Aligned_cols=117 Identities=15% Similarity=0.244 Sum_probs=103.7
Q ss_pred cccccccCCCeeEecCCCCHHHHHHHHHhC-----CCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHH
Q 011558 341 PRIGEANGRPFAMLRPTASLGSALALLVQA-----DVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQA 415 (483)
Q Consensus 341 ~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~-----~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~ 415 (483)
.+++++|.++++++.+++++.+|++.|.++ +++++||+|++|+++|+||.+|++... .+.++.+
T Consensus 137 ~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~~----------~~~~v~~- 205 (286)
T 2oux_A 137 ETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVND----------DDTLIAD- 205 (286)
T ss_dssp TBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTSC----------TTSBHHH-
T ss_pred HHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcCC----------CCCcHHH-
Confidence 366777999999999999999999999987 888999999999999999999987531 1356676
Q ss_pred HhcCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 416 LQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 416 l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
+|.+++++|.+++++.+|+++|.+++++++|||| ++|+++|+||..||++.+.
T Consensus 206 ------------im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd-~~g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 206 ------------ILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTD-YDDHLLGIVTVDDIIDVID 258 (286)
T ss_dssp ------------HSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEEHHHHHHHHH
T ss_pred ------------HcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHHHHHH
Confidence 6666789999999999999999999999999999 5799999999999999874
No 67
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.56 E-value=1.2e-14 Score=140.76 Aligned_cols=117 Identities=18% Similarity=0.272 Sum_probs=101.2
Q ss_pred ccccccCCCeeEecCCCCHHHHHHHHHhC-----CCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHH
Q 011558 342 RIGEANGRPFAMLRPTASLGSALALLVQA-----DVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQAL 416 (483)
Q Consensus 342 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~-----~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l 416 (483)
+++++|.++++++.+++++.+|++.|.++ +++++||+|++|+++|++|.+|++... .+.++.+
T Consensus 136 ~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~----------~~~~v~~-- 203 (278)
T 2yvy_A 136 EAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVAD----------PRTRVAE-- 203 (278)
T ss_dssp BGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHSC----------TTCBSTT--
T ss_pred hHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcCC----------CCCcHHH--
Confidence 46677999999999999999999999986 789999999899999999999997521 0233343
Q ss_pred hcCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHhc
Q 011558 417 QLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 417 ~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~~ 482 (483)
+|.+++++|.+++++.+|+++|.+++.+++|||| ++|+++|+||..||++.+.+
T Consensus 204 -----------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 204 -----------IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD-EEGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp -----------TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHC--
T ss_pred -----------HhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEe-CCCeEEEEEEHHHHHHHHHH
Confidence 7777899999999999999999999999999999 57999999999999998753
No 68
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.56 E-value=1.6e-14 Score=123.05 Aligned_cols=115 Identities=9% Similarity=0.128 Sum_probs=95.5
Q ss_pred CCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccccc
Q 011558 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (483)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (483)
.+++++.+++++.+|++.|.+++++++||+++ +++ +++|++|.+|+++++.... .....
T Consensus 12 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~--~~~---~lvGivt~~dl~~~~~~~~-------~~~~~--------- 70 (130)
T 3hf7_A 12 NEIVGIDINDDWKSIVRQLTHSPHGRIVLYRD--SLD---DAISMLRVREAYRLMTEKK-------EFTKE--------- 70 (130)
T ss_dssp GGCCEEETTSCHHHHHHHHHTCSSSEEEEESS--SGG---GEEEEEEHHHHHHHHTSSS-------CCCHH---------
T ss_pred HHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcC--CCC---cEEEEEEHHHHHHHHhccC-------ccchh---------
Confidence 46889999999999999999999999999942 234 8999999999998774311 00012
Q ss_pred cccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 339 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
.+.++| +++.++.+++++.+|+++|.+++++.+||+|++|+++|++|..|+++.+.
T Consensus 71 ---~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 71 ---IMLRAA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIV 126 (130)
T ss_dssp ---HHHHHS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred ---hHHHhc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHh
Confidence 234457 56789999999999999999999999999999999999999999998654
No 69
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.56 E-value=7.3e-15 Score=124.71 Aligned_cols=116 Identities=18% Similarity=0.203 Sum_probs=99.0
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (483)
+|.+++.++.+++++.+|++.|.+++++.+||+++ | +++|++|.+|+++.+..... ..
T Consensus 10 ~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~----~---~~~Givt~~dl~~~~~~~~~--------~~------- 67 (128)
T 3gby_A 10 LAETDYPVFTLGGSTADAARRLAASGCACAPVLDG----E---RYLGMVHLSRLLEGRKGWPT--------VK------- 67 (128)
T ss_dssp GCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET----T---EEEEEEEHHHHHTTCSSSCC--------TT-------
T ss_pred hhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC----C---EEEEEEEHHHHHHHHhhCCc--------cc-------
Confidence 57788999999999999999999999999999953 4 89999999999875432100 01
Q ss_pred ccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 336 i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
..++++|.+++.++.+++++.+|+++|.+++.+.+||+|++|+++|++|..|+++.+.
T Consensus 68 -----~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 68 -----EKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp -----CBCCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred -----CcHHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 1345568889999999999999999999999999999999999999999999998664
No 70
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.55 E-value=1.1e-14 Score=123.39 Aligned_cols=111 Identities=12% Similarity=0.134 Sum_probs=93.2
Q ss_pred CeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccccccc
Q 011558 260 PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTW 339 (483)
Q Consensus 260 ~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~~~ 339 (483)
+++++.+++++.+|++.|.+++++++||+++ ..| +++|++|.+|+++.+.... ...
T Consensus 14 ~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~vGivt~~dl~~~~~~~~---------~~~---------- 69 (127)
T 3nqr_A 14 QMITLKRNQTLDECLDVIIESAHSRFPVISE--DKD---HIEGILMAKDLLPFMRSDA---------EAF---------- 69 (127)
T ss_dssp GCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGGSTTC---------CCC----------
T ss_pred HeEEEcCCCCHHHHHHHHHhCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHhccC---------CCC----------
Confidence 4889999999999999999999999999953 225 8999999999988763211 112
Q ss_pred ccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 011558 340 VPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 397 (483)
Q Consensus 340 ~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~ 397 (483)
.++++|.+ +.++.+++++.+|+++|.+++++.+||+|++|+++|++|+.|+++.+
T Consensus 70 --~v~~~m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 70 --SMDKVLRT-AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp --CHHHHCBC-CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred --CHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 34445755 67899999999999999999999999999999999999999999854
No 71
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.55 E-value=1.2e-14 Score=124.89 Aligned_cols=114 Identities=10% Similarity=0.111 Sum_probs=94.7
Q ss_pred CCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccccc
Q 011558 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (483)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (483)
.+++++.+++++.+|++.|.+++++++||+++ ..+ +++|++|.+|+++++.... ....
T Consensus 13 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~--~~~---~~vGivt~~dl~~~~~~~~--------~~~~--------- 70 (136)
T 3lfr_A 13 SQMISIKATQTPREFLPAVIDAAHSRYPVIGE--SHD---DVLGVLLAKDLLPLILKAD--------GDSD--------- 70 (136)
T ss_dssp GGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGGGSSS--------GGGC---------
T ss_pred HHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHHhcc--------CCCc---------
Confidence 56789999999999999999999999999954 225 8999999999998764210 0112
Q ss_pred cccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 339 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
.+.++|.+ +.++.+++++.+|+++|.+++++.+||+|++|+++|++|.+|+++.+.
T Consensus 71 ---~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 71 ---DVKKLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp ---CGGGTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC-
T ss_pred ---CHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 34455865 789999999999999999999999999999999999999999997544
No 72
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.55 E-value=2.9e-14 Score=121.27 Aligned_cols=111 Identities=10% Similarity=0.125 Sum_probs=92.9
Q ss_pred CCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccccc
Q 011558 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (483)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (483)
.+++++.+++++.+|++.|.+++++++||+++ +.+ +++|++|.+|+++++.. ...+
T Consensus 15 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~~Givt~~dl~~~~~~-----------~~~~-------- 70 (129)
T 3jtf_A 15 SRMDLLDISQPLPQLLATIIETAHSRFPVYED--DRD---NIIGILLAKDLLRYMLE-----------PALD-------- 70 (129)
T ss_dssp GGCCCEETTSCHHHHHHHHHHSCCSEEEEESS--STT---CEEEEEEGGGGGGGGTC-----------TTSC--------
T ss_pred HHeEEECCCCCHHHHHHHHHHcCCCEEEEEcC--CCC---cEEEEEEHHHHHhHhcc-----------CCcC--------
Confidence 56789999999999999999999999999953 225 89999999999886531 0122
Q ss_pred cccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 339 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
++++|.+ +.++.+++++.+|+++|.+++.+.+||+|++|+++|++|+.|+++.+.
T Consensus 71 ----v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 71 ----IRSLVRP-AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIV 125 (129)
T ss_dssp ----GGGGCBC-CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHH
T ss_pred ----HHHHhCC-CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 3444754 779999999999999999999999999998899999999999998654
No 73
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.55 E-value=2.5e-14 Score=122.05 Aligned_cols=116 Identities=22% Similarity=0.319 Sum_probs=99.4
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (483)
+|.++++++.+++++.+|++.|.+++++.+||++ +| +++|++|.+|+++++..... ...
T Consensus 9 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~Givt~~dl~~~~~~~~~--------~~~------ 67 (133)
T 2ef7_A 9 YMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD----GN---KPVGIITERDIVKAIGKGKS--------LET------ 67 (133)
T ss_dssp TSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHHHTTCC--------TTC------
T ss_pred hccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE----CC---EEEEEEcHHHHHHHHhcCCC--------ccc------
Confidence 5667889999999999999999999999999995 35 89999999999987753211 112
Q ss_pred ccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 336 i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
.+.++|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|++|..|+++.+.
T Consensus 68 ------~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 68 ------KAEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAID 124 (133)
T ss_dssp ------BGGGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred ------CHHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 345558788899999999999999999999999999998999999999999998665
No 74
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.54 E-value=3.5e-14 Score=119.55 Aligned_cols=116 Identities=17% Similarity=0.237 Sum_probs=97.9
Q ss_pred CCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccc
Q 011558 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (483)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (483)
|.++++++.+++++.+|++.|.+++.+.+||++ +| +++|++|.+|+++++..... ....
T Consensus 7 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~G~it~~dl~~~~~~~~~-------~~~~------- 65 (125)
T 1pbj_A 7 MVTDVDTIDITASLEDVLRNYVENAKGSSVVVK----EG---VRVGIVTTWDVLEAIAEGDD-------LAEV------- 65 (125)
T ss_dssp CBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE----TT---EEEEEEEHHHHHHHHHHTCC-------TTTS-------
T ss_pred cCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe----CC---eeEEEEeHHHHHHHHhcCCc-------cccc-------
Confidence 566889999999999999999999999999995 35 89999999999987654211 0122
Q ss_pred cccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 011558 337 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (483)
Q Consensus 337 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~ 399 (483)
.++++|.+++.++.+++++.+|++.|.+++.+.+||+|+ |+++|++|.+|+++.+..
T Consensus 66 -----~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 66 -----KVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp -----BHHHHCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC-
T ss_pred -----CHHHHcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 344558888999999999999999999999999999997 999999999999986653
No 75
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.54 E-value=2e-14 Score=126.10 Aligned_cols=112 Identities=12% Similarity=0.143 Sum_probs=96.8
Q ss_pred CeEEeCCCCCHHHHHHHHHhCCCceeEEE-ecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccccc
Q 011558 260 PLVQAGPYDSLKEVALKILQNKVATVPII-HSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (483)
Q Consensus 260 ~~v~v~~~~sl~~a~~~m~~~~~~~ipVv-d~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (483)
+++++.+++++.+|++.|.+++++++||+ ++ ..| +++|++|.+|+++.+.... ..
T Consensus 31 ~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~--~~~---~lvGivt~~dl~~~~~~~~----------~~--------- 86 (153)
T 3oco_A 31 SMSVVDVDETIADALLLYLEEQYSRFPVTADN--DKD---KIIGYAYNYDIVRQARIDD----------KA--------- 86 (153)
T ss_dssp GCCCEETTSBHHHHHHHHHHHCCSEEEEEETT--EEE---EEEEEEEHHHHHHHHHHHT----------TS---------
T ss_pred heEEEcCCCCHHHHHHHHHhCCCCEEEEEECC--CCC---cEEEEEEHHHHHhHHhcCC----------CC---------
Confidence 78899999999999999999999999999 42 124 8999999999998875421 12
Q ss_pred cccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 011558 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (483)
Q Consensus 339 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~ 399 (483)
.++++| +++.++.+++++.+|+++|.+++++.+||+|++|+++|+||..||++.+..
T Consensus 87 ---~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 87 ---KISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp ---BGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC
T ss_pred ---cHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhc
Confidence 345558 789999999999999999999999999999999999999999999986654
No 76
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.53 E-value=4.2e-14 Score=122.05 Aligned_cols=117 Identities=18% Similarity=0.271 Sum_probs=98.0
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (483)
+|.++++++.+++++.+|++.|.+++++++||+++ ++ ..+++|++|.+|+++++..... ...
T Consensus 10 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~-~~~~~Givt~~dl~~~~~~~~~--------~~~------ 71 (141)
T 2rih_A 10 LLKRPPVSLPETATIREVATELAKNRVGLAVLTAR---DN-PKRPVAVVSERDILRAVAQRLD--------LDG------ 71 (141)
T ss_dssp GCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEET---TE-EEEEEEEEEHHHHHHHHHTTCC--------TTS------
T ss_pred HhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC---CC-cceeEEEEEHHHHHHHHhcCCC--------CCC------
Confidence 56778999999999999999999999999999964 10 0169999999999987753210 122
Q ss_pred ccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 011558 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 397 (483)
Q Consensus 336 i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~ 397 (483)
.+.++|.+++.++.++ ++.+|+++|.+++.+.+||+|++|+++|++|.+||++..
T Consensus 72 ------~v~~~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 72 ------PAMPIANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFER 126 (141)
T ss_dssp ------BSGGGCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCH
T ss_pred ------CHHHHcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHH
Confidence 3455588899999999 999999999999999999999899999999999998743
No 77
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.53 E-value=3.3e-14 Score=125.70 Aligned_cols=125 Identities=18% Similarity=0.232 Sum_probs=100.9
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (483)
+|.++++++.+++++.+|++.|.+++++.+||+|+ +| +++|+||.+|+++++...+..... . .
T Consensus 10 im~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~---~~---~lvGivt~~dl~~~~~~~~~~~~~----------~-~ 72 (160)
T 2o16_A 10 MMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDA---NK---KLLGIVSQRDLLAAQESSLQRSAQ----------G-D 72 (160)
T ss_dssp TSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHHHHHCC-----------------
T ss_pred HhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHHHhhccccc----------c-c
Confidence 56678899999999999999999999999999954 45 899999999999987643221000 0 0
Q ss_pred ccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 336 i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
-......+.++|.+++.++.+++++.+|+++|.+++++.+||+|+ |+++|+||..||++.+.
T Consensus 73 ~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~ 134 (160)
T 2o16_A 73 SLAFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAI 134 (160)
T ss_dssp ---CCCBHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHH
T ss_pred chhcccCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 001122456669999999999999999999999999999999997 99999999999998655
No 78
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.53 E-value=5.9e-14 Score=124.65 Aligned_cols=116 Identities=19% Similarity=0.282 Sum_probs=98.6
Q ss_pred CCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccccc
Q 011558 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (483)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (483)
.+++++.+++++.+|++.|.+++++.+||+++ +| +++|+||.+||++.+...... ....
T Consensus 35 ~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~~------~~~~--------- 93 (165)
T 3fhm_A 35 RDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDA---DG---VVLGIFTERDLVKAVAGQGAA------SLQQ--------- 93 (165)
T ss_dssp SCCCEECTTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHHHHHGGG------GGTS---------
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC---CC---eEEEEEEHHHHHHHHHhcCCc------cccC---------
Confidence 36789999999999999999999999999964 45 899999999999987653211 1122
Q ss_pred cccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 011558 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (483)
Q Consensus 339 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~ 399 (483)
.+.++|.+++.++.+++++.+|+++|.+++++.+||+|+ |+++|+||..||++.+..
T Consensus 94 ---~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 94 ---SVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp ---BGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTC
T ss_pred ---CHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 345558889999999999999999999999999999998 999999999999987653
No 79
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.53 E-value=3e-14 Score=122.30 Aligned_cols=117 Identities=21% Similarity=0.390 Sum_probs=98.0
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhH-HHHHHhhccCCCCCCcccccccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDI-LKCICRHFKHSSSSLPILQQPVSSI 334 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dI-l~~l~~~~~~~~~~~~~~~~~v~~l 334 (483)
+|.++++++.+++++.+|++.|.+++.+.+||+++ +| +++|++|..|+ ++++.... ....
T Consensus 13 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~--------~~~~----- 73 (138)
T 2p9m_A 13 VMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDD---EN---KVIGIVTTTDIGYNLIRDKY--------TLET----- 73 (138)
T ss_dssp TSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECT---TC---BEEEEEEHHHHHHHHTTTCC--------CSSC-----
T ss_pred hhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECC---CC---eEEEEEEHHHHHHHHHhhcc--------cCCc-----
Confidence 46678889999999999999999999999999954 35 89999999999 87653210 1122
Q ss_pred cccccccccccccCCCeeEecCCCCHHHHHHHHHhCC-----CCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 335 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQAD-----VSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 335 ~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~-----~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
.+.++|.+++.++.+++++.+|++.|.+++ .+.+||+|++|+++|++|..|+++.+.
T Consensus 74 -------~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 74 -------TIGDVMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp -------BHHHHSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred -------CHHHHhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 345558888999999999999999999999 999999998999999999999998654
No 80
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=99.52 E-value=1.2e-14 Score=158.14 Aligned_cols=82 Identities=17% Similarity=0.145 Sum_probs=69.5
Q ss_pred cCCcceEEEEEecC--CCceEEEEeccCCCCCC-CCCCcCCCCCCeEEEEEEcCCceEEEEEEEcCeee--eCCCCC---
Q 011558 16 VGSILVPVRFIWPN--GGRRVSLSGSFTRWSEP-MPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWR--HDENQP--- 87 (483)
Q Consensus 16 ~~~~~~~~~f~~~~--~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~l~~g~~~ykf~vdg~w~--~d~~~~--- 87 (483)
..+..++|+|+++. +|++|+|+||||||++. .+|.+. +|.|++++.||||.|||||+|||+|. +||++|
T Consensus 13 ~~~~~~~v~f~~~~~~~~~~v~~~G~Fn~w~~~~~~~~~~---~~~~~~~~~L~~g~~~y~f~vdg~~~~~~d~~~~~~~ 89 (696)
T 4aee_A 13 GRKGRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRKI---EEQGIVYLKLWPGEYGYGFQIDNDFENVLDPDNEEKK 89 (696)
T ss_dssp TEEEEEEEEEEEECCTTCSCEEEEETTSCSSTTSCBCEEE---TTEEEEEEEECSEEEEEEEEETTCCSCCCCTTCCCEE
T ss_pred CCCCcEEEEEEEECCCCCcEEEEEEecCCCCCCCcceEec---CCeEEEEEEcCCceEEEEEEECCEEeecCCCCCCccc
Confidence 34466777777765 69999999999999764 577775 79999999999999999999999999 778777
Q ss_pred eeeCCCCCeeeEE
Q 011558 88 HVSGNYGVVNCVY 100 (483)
Q Consensus 88 ~~~~~~g~~nn~~ 100 (483)
++.|++|..|++.
T Consensus 90 y~~~~~g~~n~~~ 102 (696)
T 4aee_A 90 CVHTSFFPEYKKC 102 (696)
T ss_dssp EEECSSCTTSEEE
T ss_pred ccccCCcccccee
Confidence 4669999999985
No 81
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.52 E-value=8.1e-14 Score=119.61 Aligned_cols=119 Identities=15% Similarity=0.293 Sum_probs=98.9
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (483)
+|.++++++.+++++.+|++.|.+++++.+||+++ +| +++|++|..|+++.+..... ....
T Consensus 12 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~-------~~~~------ 72 (138)
T 2yzi_A 12 YMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIND---DG---NVVGFFTKSDIIRRVIVPGL-------PYDI------ 72 (138)
T ss_dssp TCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHTTTTCC-------CTTS------
T ss_pred HhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHHhcCC-------cccC------
Confidence 56778999999999999999999999999999953 45 89999999999854321100 0112
Q ss_pred ccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcc
Q 011558 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 400 (483)
Q Consensus 336 i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~ 400 (483)
.+.++|.+++.++.+++++.+|+++|.+++++.+ |+|++|+++|++|..||++.+...
T Consensus 73 ------~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~ 130 (138)
T 2yzi_A 73 ------PVERIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRR 130 (138)
T ss_dssp ------BGGGTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCC
T ss_pred ------CHHHHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHH
Confidence 3455688899999999999999999999999999 999889999999999999876643
No 82
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.52 E-value=1.7e-13 Score=129.81 Aligned_cols=212 Identities=12% Similarity=0.153 Sum_probs=131.1
Q ss_pred ccccccCCCCccEEEEccCcCHHHHHHHHHHcCCCeeeceeCCCCceeEEeeHHHHHHHHHHhccCCCCCCHHHHhhccH
Q 011558 155 HTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTI 234 (483)
Q Consensus 155 ~~~~d~~p~s~kvi~l~~~~~v~~A~~~l~e~~i~s~PV~d~~~~~~vGilt~~D~i~il~~~~~~~~~l~~~~l~~~~i 234 (483)
.++.|+| +.++++++.+.++.+|++.|.++++.++||+|.+ ++++|++|..|++..+...... ........+.
T Consensus 7 ~~v~~im--~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~~----~~~~~~~~~~ 79 (245)
T 3l2b_A 7 LKVEDLE--MDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIWDS----NILAKSATSL 79 (245)
T ss_dssp CBGGGSC--CBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCCT----THHHHTTCCH
T ss_pred CcHHHhc--CCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhhh----hhhhhccCCH
Confidence 5678888 4578999999999999999999999999999965 5799999999999776532110 0111112222
Q ss_pred HHHHHHHhhh--hcc-c--c------------CCCCCCCCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCC--
Q 011558 235 SAWKVGKLQL--NLK-R--Q------------MDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAG-- 295 (483)
Q Consensus 235 ~~~~~~~~~~--~~~-~--~------------~d~~g~~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g-- 295 (483)
..+.+..... ... . . ...........++.+.. -.++...+.+.+++.++++.......
T Consensus 80 ~~v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgd---r~~~~~~~i~~~~~~liit~~~~~~~~v 156 (245)
T 3l2b_A 80 DNILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGD---RAEIQAELIELKVSLLIVTGGHTPSKEI 156 (245)
T ss_dssp HHHHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECS---CHHHHHHHHHTTCSEEEECTTCCCCHHH
T ss_pred HHHHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECC---CHHHHHHHHHcCCCEEEECCCCCCCHHH
Confidence 3222211100 000 0 0 00000112234444422 37888888999999888873211000
Q ss_pred ----CcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccccccccccccccC-CCeeEecCCCCHHHHHHHHHhC
Q 011558 296 ----SCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANG-RPFAMLRPTASLGSALALLVQA 370 (483)
Q Consensus 296 ----~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~~~~~~v~~~m~-~~~~~v~~~~~l~~a~~~m~~~ 370 (483)
....+-.+.|..|....... ......++++|. +++.++.+++++.+|+++|.++
T Consensus 157 ~~~a~~~~~~~i~t~~d~~~~~~~---------------------~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~ 215 (245)
T 3l2b_A 157 IELAKKNNITVITTPHDSFTASRL---------------------IVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSET 215 (245)
T ss_dssp HHHHHHHTCEEEECSSCHHHHHHH---------------------GGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEeCCChHHHHHH---------------------HhcCCceeeEecCCccEEECCCCcHHHHHHHHHhc
Confidence 00012334444443322111 011124667798 8999999999999999999999
Q ss_pred CCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 011558 371 DVSSIPIVDDNDSLLDIYSRSDITALA 397 (483)
Q Consensus 371 ~~~~lpVvd~~g~lvGiit~~di~~l~ 397 (483)
+++++||+|++|+++|++|++|+++..
T Consensus 216 ~~~~~pVvd~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 216 RYSNYPVIDENNKVVGSIARFHLISTH 242 (245)
T ss_dssp CCSEEEEECTTCBEEEEEECC------
T ss_pred CCceEEEEcCCCeEEEEEEHHHhhchh
Confidence 999999999999999999999998754
No 83
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.52 E-value=4.2e-14 Score=124.79 Aligned_cols=117 Identities=13% Similarity=0.204 Sum_probs=97.6
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (483)
+|.++ +++.+++++.+|++.|.+++++.+||+++ +| +++|+||.+||++.+.... .....
T Consensus 22 im~~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~-------~~~~~------ 81 (159)
T 3fv6_A 22 FQSIP-VVIHENVSVYDAICTMFLEDVGTLFVVDR---DA---VLVGVLSRKDLLRASIGQQ-------ELTSV------ 81 (159)
T ss_dssp SCBCC-CEEETTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHHTSCS-------CTTTC------
T ss_pred HcCCC-EEECCCCcHHHHHHHHHHCCCCEEEEEcC---CC---cEEEEEeHHHHHHHhhccC-------cccCc------
Confidence 45554 59999999999999999999999999964 45 8999999999998764221 01122
Q ss_pred ccccccccccccCC--CeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCC---cEEEEEeHHHHHHHHh
Q 011558 336 LGTWVPRIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDND---SLLDIYSRSDITALAK 398 (483)
Q Consensus 336 i~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g---~lvGiit~~di~~l~~ 398 (483)
.+.++|.+ ++.++.+++++.+|+++|.+++++.+||+|++| +++|+||..||++.+.
T Consensus 82 ------~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~ 143 (159)
T 3fv6_A 82 ------PVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILV 143 (159)
T ss_dssp ------BGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHH
T ss_pred ------CHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHH
Confidence 34555877 889999999999999999999999999999888 9999999999998665
No 84
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.52 E-value=7.2e-14 Score=121.81 Aligned_cols=119 Identities=15% Similarity=0.188 Sum_probs=97.3
Q ss_pred CCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccccc
Q 011558 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (483)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (483)
.+++++.+++++.+|++.|.+++++++||+|+ +| +++|++|.+||++++...... ... ..
T Consensus 25 ~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~~----------~~~----~~ 84 (150)
T 3lqn_A 25 EKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP---MY---KLHGLISTAMILDGILGLERI----------EFE----RL 84 (150)
T ss_dssp GGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHTBCSSSB----------CGG----GG
T ss_pred CceEEECCCCcHHHHHHHHHHcCCcEEEEECC---CC---CEEEEEEHHHHHHHHHhhccc----------chh----HH
Confidence 45889999999999999999999999999964 45 899999999999887432110 000 00
Q ss_pred cccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 011558 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (483)
Q Consensus 339 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~ 399 (483)
....++++|.+++.++.+++++.+|+++|.++++ +||+|++|+++|+||..||++.+..
T Consensus 85 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 85 EEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNK 143 (150)
T ss_dssp GGCBGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred hcCCHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHH
Confidence 1224566798899999999999999999999886 9999999999999999999997653
No 85
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.51 E-value=1.5e-14 Score=126.15 Aligned_cols=131 Identities=18% Similarity=0.247 Sum_probs=99.1
Q ss_pred CCCC--CeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccc
Q 011558 256 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 333 (483)
Q Consensus 256 ~~~~--~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~ 333 (483)
+|.+ +++++.+++++.+|++.|.+++++.+||+++ +| +++|++|.+|+++++...... ..+. ....
T Consensus 10 im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~G~vt~~dl~~~~~~~~~~-----~~~~-~~~~ 77 (152)
T 4gqw_A 10 FMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDE---DW---KLVGLVSDYDLLALDSGDSTW-----KTFN-AVQK 77 (152)
T ss_dssp TSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECT---TC---BEEEEEEHHHHTTCC----CC-----HHHH-HHHT
T ss_pred ccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeC---CC---eEEEEEEHHHHHHhhcccCcc-----cchH-HHHH
Confidence 4555 7899999999999999999999999999954 45 899999999998754321100 0000 0000
Q ss_pred ccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 334 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 334 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
.........+.++|.+++.++.+++++.+|+++|.+++++.+||+|++|+++|+||.+||++.+.
T Consensus 78 ~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 78 LLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAAL 142 (152)
T ss_dssp C-----CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred HHHHhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHH
Confidence 00011123456678888899999999999999999999999999999999999999999999665
No 86
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.51 E-value=1e-13 Score=122.01 Aligned_cols=111 Identities=14% Similarity=0.160 Sum_probs=93.1
Q ss_pred CCCC--CeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccc
Q 011558 256 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 333 (483)
Q Consensus 256 ~~~~--~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~ 333 (483)
+|.+ +++++.+++++.+|++.|.+++++++||+++ ..+ +++|++|.+|+++++... ...
T Consensus 43 iM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~----------~~~---- 103 (156)
T 3oi8_A 43 AMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGE--DKD---EVLGILHAKDLLKYMFNP----------EQF---- 103 (156)
T ss_dssp TCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGSSCG----------GGC----
T ss_pred eeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHHcC----------Ccc----
Confidence 4554 6889999999999999999999999999953 234 799999999998765321 112
Q ss_pred ccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHH
Q 011558 334 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDIT 394 (483)
Q Consensus 334 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~ 394 (483)
.++++|.+ +.++.+++++.+|+++|.+++.+.+||+|++|+++|++|..||+
T Consensus 104 --------~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 104 --------HLKSILRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp --------CHHHHCBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred --------cHHHHcCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 34455765 78999999999999999999999999999999999999999985
No 87
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.51 E-value=1.7e-13 Score=120.53 Aligned_cols=132 Identities=14% Similarity=0.181 Sum_probs=101.0
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCce-eEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVAT-VPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 334 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~-ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l 334 (483)
+|.++++++.+++++.+|++.|.+++++. +||+|+ + +++|++|..|+++++...+.........+.....
T Consensus 21 im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~----~---~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~-- 91 (157)
T 1o50_A 21 LISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARD----N---KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMK-- 91 (157)
T ss_dssp SSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEET----T---EEEEEEEHHHHHHHHHHHHHCCCC-------CCC--
T ss_pred cccCCCceECCCCCHHHHHHHHHhCCCCccEEEEEC----C---EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHH--
Confidence 57888999999999999999999999999 999964 2 6999999999998764211000000000000000
Q ss_pred cccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 011558 335 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (483)
Q Consensus 335 ~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~ 399 (483)
......+.++|.+ +.++.+++++.+|+++|.+++++.+||+|++|+++|+||..||++.+.+
T Consensus 92 --~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 92 --RLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp --CCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred --HHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 0112346677988 9999999999999999999999999999988999999999999986653
No 88
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.50 E-value=1.9e-13 Score=116.84 Aligned_cols=114 Identities=18% Similarity=0.297 Sum_probs=96.1
Q ss_pred CCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccccc
Q 011558 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (483)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (483)
++++++.+++++.+|++.|.+++++.+||++ +| +++|++|.+|+++.+..... ....
T Consensus 17 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~Givt~~dl~~~~~~~~~------~~~~---------- 73 (135)
T 2rc3_A 17 HTVVAIGPDDSVFNAMQKMAADNIGALLVMK----DE---KLVGILTERDFSRKSYLLDK------PVKD---------- 73 (135)
T ss_dssp CCCCEECTTSBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHGGGSSS------CGGG----------
T ss_pred CCcEEECCCCcHHHHHHHHHhcCCCEEEEEE----CC---EEEEEEehHHHHHHHHHcCC------Cccc----------
Confidence 5788999999999999999999999999995 35 89999999999875432110 0111
Q ss_pred cccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 339 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
..+.++|.+++.++.+++++.+|+++|.+++++.+||+| +|+++|++|..|+++.+.
T Consensus 74 --~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 74 --TQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp --SBGGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred --CCHHHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHH
Confidence 245566888999999999999999999999999999999 799999999999998665
No 89
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.50 E-value=7.9e-14 Score=120.38 Aligned_cols=119 Identities=22% Similarity=0.231 Sum_probs=96.2
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (483)
.|.++++++.+++++.+|++.|.+++++++||+++ +| +++|++|..|+++++..... .....+
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~------~~~~~~----- 78 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE---NG---YLINVYEAYDVLGLIKGGIY------NDLSLS----- 78 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHHHTC----------CCSB-----
T ss_pred CCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcC---CC---cEEEEEcHHHHHHHhccccc------ccCCcc-----
Confidence 45678899999999999999999999999999954 35 89999999999987753210 011223
Q ss_pred ccccccccccccCC------CeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 336 LGTWVPRIGEANGR------PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 336 i~~~~~~v~~~m~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
+.++|.+ ++.++.+++++.+|+++|.+++.+.+||+|++|+++|++|.+||++.+.
T Consensus 79 -------v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 79 -------VGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp -------HHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred -------HHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 3344643 6889999999999999999999999999998899999999999998654
No 90
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.50 E-value=1.1e-13 Score=121.00 Aligned_cols=116 Identities=19% Similarity=0.224 Sum_probs=96.2
Q ss_pred CCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccccc
Q 011558 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (483)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (483)
++++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|.+|+++++..... .....+
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~---~~vGivt~~dl~~~~~~~~~------~~~~~~-------- 88 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDE---KG---RVVDIYSKFDVINLAAEKTY------NNLDVS-------- 88 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECT---TS---BEEEEEEHHHHHHHHHCSSC------CCTTSB--------
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECC---CC---cEEEEEeHHHHHHHhcchhh------hhhcch--------
Confidence 57888999999999999999999999999964 45 89999999999987653210 011222
Q ss_pred cccccccccC------CCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 339 WVPRIGEANG------RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 339 ~~~~v~~~m~------~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
+.++|. +++.++.+++++.+|+++|.+++++.+||+|++|+++|++|..||++.+.
T Consensus 89 ----v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 89 ----VTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp ----GGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC
T ss_pred ----HHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 334464 67889999999999999999999999999998899999999999998653
No 91
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.50 E-value=1.3e-13 Score=123.57 Aligned_cols=118 Identities=7% Similarity=0.059 Sum_probs=97.6
Q ss_pred CCCCC--CCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccc
Q 011558 254 GRPCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPV 331 (483)
Q Consensus 254 g~~~~--~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v 331 (483)
+.+|. .+++++.+++++.+|++.|.+++++++||+++ ..+ +++|+||.+||++++.... ..+
T Consensus 39 ~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~Dl~~~~~~~~----------~~~- 102 (173)
T 3ocm_A 39 RSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRG--SLD---EVVGIGRAKDLVADLITEG----------RVR- 102 (173)
T ss_dssp TTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESS--STT---SEEEEEEHHHHHHHHHHHS----------SCC-
T ss_pred HHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---CEEEEEEHHHHHHHHhcCC----------cch-
Confidence 34564 46889999999999999999999999999953 225 8999999999998875321 111
Q ss_pred ccccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcc
Q 011558 332 SSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 400 (483)
Q Consensus 332 ~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~ 400 (483)
+. |.+++.++.+++++.+|+++|.+++++.+||+|++|+++|+||..||+..+...
T Consensus 103 -----------v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~ 158 (173)
T 3ocm_A 103 -----------RN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGE 158 (173)
T ss_dssp -----------GG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCC
T ss_pred -----------hH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCc
Confidence 22 235678999999999999999999999999999999999999999999976643
No 92
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.50 E-value=5.3e-14 Score=122.68 Aligned_cols=114 Identities=16% Similarity=0.227 Sum_probs=96.3
Q ss_pred CCCC--CeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccc
Q 011558 256 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 333 (483)
Q Consensus 256 ~~~~--~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~ 333 (483)
+|.+ +++++.+++++.+|++.|.+++++.+||+++ +| +++|+||..|+++.+.... .....
T Consensus 33 im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~-------~~~~~---- 95 (149)
T 3k2v_A 33 IMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDD---DM---NIIGIFTDGDLRRVFDTGV-------DMRDA---- 95 (149)
T ss_dssp TSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECT---TC---BEEEEEEHHHHHHHHCSSS-------CCTTC----
T ss_pred HhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECC---CC---cEEEEecHHHHHHHHhcCC-------CcccC----
Confidence 4666 8899999999999999999999999999964 45 8999999999998774321 11122
Q ss_pred ccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHH
Q 011558 334 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA 395 (483)
Q Consensus 334 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~ 395 (483)
.++++|.+++.++.+++++.+|+++|.+++++.+||+|++ +++|+||..||++
T Consensus 96 --------~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 96 --------SIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp --------BHHHHSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred --------cHHHHcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 3445588889999999999999999999999999999965 9999999999864
No 93
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.50 E-value=6.4e-14 Score=147.56 Aligned_cols=123 Identities=19% Similarity=0.235 Sum_probs=104.1
Q ss_pred cccccccCCCeeEecCC-CCHHHHHHHHHhCCCCEEEEEc-CCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhc
Q 011558 341 PRIGEANGRPFAMLRPT-ASLGSALALLVQADVSSIPIVD-DNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 418 (483)
Q Consensus 341 ~~v~~~m~~~~~~v~~~-~~l~~a~~~m~~~~~~~lpVvd-~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~ 418 (483)
.+|+++|.++++++.++ +++.+|+++|.+++++++||+| ++++++|+||.+||++.+..+... .+.++.+
T Consensus 384 ~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~----~~~~V~~---- 455 (527)
T 3pc3_A 384 LAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQ----QSDPAIK---- 455 (527)
T ss_dssp SBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCC----TTSBGGG----
T ss_pred CcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCc----CCCcHHH----
Confidence 46888899999999999 9999999999999999999999 789999999999999865432111 1245555
Q ss_pred CCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCC---CCeEEEEEehHHHHHHHhc
Q 011558 419 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAG---SKRVEGIISLSDVFRFLLG 482 (483)
Q Consensus 419 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~---~~~l~GiIs~~DIl~~l~~ 482 (483)
+|.++++++.+++++.+++++|.++++ +||||++ .|+++||||+.||++++..
T Consensus 456 ---------im~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~ 511 (527)
T 3pc3_A 456 ---------ALNKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAA 511 (527)
T ss_dssp ---------GEETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHT
T ss_pred ---------HhcCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHh
Confidence 777789999999999999999987775 7999931 3899999999999999864
No 94
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.50 E-value=1e-13 Score=125.41 Aligned_cols=119 Identities=13% Similarity=0.125 Sum_probs=100.3
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (483)
+|.++++++.+++++.+|++.|.+++++++||+++ +| +++|++|.+||++++......
T Consensus 14 im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~---~g---~~vGivt~~dl~~~~~~~~~~---------------- 71 (184)
T 1pvm_A 14 IMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDD---NG---NDVGLLSERSIIKRFIPRNKK---------------- 71 (184)
T ss_dssp TSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECT---TS---CEEEEEEHHHHHHHTGGGCCC----------------
T ss_pred hcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHhhcccC----------------
Confidence 56778999999999999999999999999999954 35 899999999999876432000
Q ss_pred ccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 336 i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
.....++++|.+++.++.+++++.+|+++|.+++.+.+||+|++|+++|+||..||++.+.
T Consensus 72 --~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 72 --PDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp --GGGSBGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSC
T ss_pred --cccCCHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 0112455668889999999999999999999999999999998899999999999987554
No 95
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.49 E-value=1.8e-13 Score=120.13 Aligned_cols=122 Identities=16% Similarity=0.226 Sum_probs=98.5
Q ss_pred CCCC--CeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccc
Q 011558 256 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 333 (483)
Q Consensus 256 ~~~~--~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~ 333 (483)
+|.+ +++++.+++++.+|++.|.+++++++||+++ +| +++|++|..|+++++...... . ..
T Consensus 16 im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~~--------~--~~- 78 (157)
T 2emq_A 16 FLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDT---SY---KLHGLISMTMMMDAILGLERI--------E--FE- 78 (157)
T ss_dssp TCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECT---TC---CEEEEEEHHHHHHHSBCSSSB--------C--GG-
T ss_pred hccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcC---CC---CEEEEeeHHHHHHHHhccccc--------c--hH-
Confidence 4554 7889999999999999999999999999954 45 899999999999876421100 0 00
Q ss_pred ccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 011558 334 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (483)
Q Consensus 334 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~ 399 (483)
......+.++|.+++.++.+++++.+|+++|.++++ +||+|++|+++|+||.+||++.+..
T Consensus 79 ---~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~ 139 (157)
T 2emq_A 79 ---RLETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNK 139 (157)
T ss_dssp ---GGGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHH
T ss_pred ---HhcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 001224566798999999999999999999999987 9999988999999999999986653
No 96
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.48 E-value=4.9e-14 Score=120.17 Aligned_cols=115 Identities=16% Similarity=0.259 Sum_probs=95.6
Q ss_pred CCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHH-HHHhhccCCCCCCccccccccccc
Q 011558 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK-CICRHFKHSSSSLPILQQPVSSIQ 335 (483)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~-~l~~~~~~~~~~~~~~~~~v~~l~ 335 (483)
|.++++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|.+|+++ ++..... ....
T Consensus 14 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~~-------~~~~------ 74 (133)
T 1y5h_A 14 MNAGVTCVGEHETLTAAAQYMREHDIGALPICGD---DD---RLHGMLTDRDIVIKGLAAGLD-------PNTA------ 74 (133)
T ss_dssp SEETCCCEETTSBHHHHHHHHHHHTCSEEEEECG---GG---BEEEEEEHHHHHHTTGGGTCC-------TTTS------
T ss_pred hcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECC---CC---eEEEEEeHHHHHHHHHhcCCC-------cccc------
Confidence 4567888999999999999999999999999954 35 8999999999984 4432110 0112
Q ss_pred ccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 011558 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 397 (483)
Q Consensus 336 i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~ 397 (483)
.++++|.+++.++.+++++.+|+++|.+++.+.+||+|+ |+++|++|..||++.+
T Consensus 75 ------~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 75 ------TAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHL 129 (133)
T ss_dssp ------BHHHHHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTC
T ss_pred ------CHHHHhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 345558889999999999999999999999999999997 9999999999998754
No 97
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.47 E-value=5.7e-14 Score=123.36 Aligned_cols=118 Identities=18% Similarity=0.218 Sum_probs=96.6
Q ss_pred CCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccccc
Q 011558 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (483)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (483)
++++++.+++++.+|++.|.+++++++||+|+ +| +++|++|.+||++++....... .....
T Consensus 25 ~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~---~~---~~~Giit~~dl~~~~~~~~~~~---~~~~~---------- 85 (156)
T 3ctu_A 25 KNLAVLIDTHNADHATLLLSQMTYTRVPVVTD---EK---QFVGTIGLRDIMAYQMEHDLSQ---EIMAD---------- 85 (156)
T ss_dssp GGCCCEETTSBHHHHHHHHTTCSSSEEEEECC----C---BEEEEEEHHHHHHHHHHHTCCH---HHHTT----------
T ss_pred cCceEECCCCCHHHHHHHHHHCCCceEeEECC---CC---EEEEEEcHHHHHHHHHhccccc---ccccc----------
Confidence 67889999999999999999999999999954 45 8999999999999876421100 00011
Q ss_pred cccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 011558 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (483)
Q Consensus 339 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~ 399 (483)
..++++|.+++.++.+++++.+|+++|.+++ .+||+|++|+++|++|.+|+++.+.+
T Consensus 86 --~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~ 142 (156)
T 3ctu_A 86 --TDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp --SBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHH
T ss_pred --CcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 2455668889999999999999999998876 79999999999999999999997653
No 98
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.47 E-value=1e-13 Score=124.56 Aligned_cols=133 Identities=19% Similarity=0.280 Sum_probs=97.4
Q ss_pred CeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCC--CCCCccccccc------
Q 011558 260 PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHS--SSSLPILQQPV------ 331 (483)
Q Consensus 260 ~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~--~~~~~~~~~~v------ 331 (483)
+++++.+++++.+|+++|.+++++.+||+++ +| +++|+||.+||++++....... ....+......
T Consensus 15 ~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (180)
T 3sl7_A 15 NLHVVKPSTSVDDALELLVEKKVTGLPVIDD---NW---TLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTFNEL 88 (180)
T ss_dssp GCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHTCC-------------------CCCSHHHH
T ss_pred CceeeCCCCcHHHHHHHHHHcCCCeEEEECC---CC---eEEEEEEHHHHHhhhhhccccCCcccccccccchhhhhHHH
Confidence 6889999999999999999999999999964 45 8999999999986432111000 00000000000
Q ss_pred ccccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 332 SSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 332 ~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
..+........++++|.+++.++.+++++.+|+++|.+++++.+||+|++|+++|+||..||++.+.
T Consensus 89 ~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~ 155 (180)
T 3sl7_A 89 QKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAAL 155 (180)
T ss_dssp HHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred HHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 0000011223567779988999999999999999999999999999999999999999999998665
No 99
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.46 E-value=2.6e-13 Score=119.22 Aligned_cols=116 Identities=13% Similarity=0.240 Sum_probs=98.1
Q ss_pred CCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccccc
Q 011558 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (483)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (483)
++++++.+++++.+|++.|.+++++.+||.+ +| +++|++|..|+++++...... ....
T Consensus 21 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~----~~---~~~Givt~~dl~~~~~~~~~~------~~~~--------- 78 (157)
T 4fry_A 21 RTIYTVTKNDFVYDAIKLMAEKGIGALLVVD----GD---DIAGIVTERDYARKVVLQERS------SKAT--------- 78 (157)
T ss_dssp CCCCEEETTSBHHHHHHHHHHHTCSEEEEES----SS---SEEEEEEHHHHHHHSGGGTCC------SSSC---------
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEee----CC---EEEEEEEHHHHHHHHHhccCC------cccc---------
Confidence 5688999999999999999999999999963 35 899999999999887543211 1122
Q ss_pred cccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcc
Q 011558 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 400 (483)
Q Consensus 339 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~ 400 (483)
.++++|.+++.++.+++++.+|+++|.+++++.+||+| +|+++|++|.+||++.+...
T Consensus 79 ---~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~ 136 (157)
T 4fry_A 79 ---RVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIAD 136 (157)
T ss_dssp ---BHHHHSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTT
T ss_pred ---CHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHH
Confidence 34555888999999999999999999999999999999 79999999999999977643
No 100
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.46 E-value=2.6e-13 Score=119.92 Aligned_cols=122 Identities=13% Similarity=0.144 Sum_probs=95.8
Q ss_pred CCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccc
Q 011558 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (483)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (483)
|.++++++.+++++.+|++.|.+++++++||+|+ .++| +++|++|..|+++++....... ......
T Consensus 19 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~-~~~~---~~~Givt~~dl~~~~~~~~~~~---~~~~~~------- 84 (164)
T 2pfi_A 19 MNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVES-TESQ---ILVGIVQRAQLVQALQAEPPSR---APGHQQ------- 84 (164)
T ss_dssp CBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHC----------CCCC-------
T ss_pred cCCCCeEECCCCcHHHHHHHHHhCCCCceeEEec-CCCC---EEEEEEEHHHHHHHHHhhcccc---CCcccc-------
Confidence 5667889999999999999999999999999952 1245 8999999999998775321110 001112
Q ss_pred cccccccccccCCC------eeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 337 GTWVPRIGEANGRP------FAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 337 ~~~~~~v~~~m~~~------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
.+.++|.++ +.++.+++++.+|+++|.+++.+++||+| +|+++|++|++||++.+.
T Consensus 85 -----~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~ 146 (164)
T 2pfi_A 85 -----CLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAIS 146 (164)
T ss_dssp -----BHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred -----hhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 233445544 78899999999999999999999999999 799999999999998665
No 101
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.45 E-value=2e-13 Score=141.50 Aligned_cols=116 Identities=18% Similarity=0.273 Sum_probs=102.0
Q ss_pred ccccccCCCeeEecCCCCHHHHHHHHHhC-----CCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHH
Q 011558 342 RIGEANGRPFAMLRPTASLGSALALLVQA-----DVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQAL 416 (483)
Q Consensus 342 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~-----~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l 416 (483)
+++++|.++++++.+++++.+|++.|.++ +++++||+|++++++|+++.+|++... .+.++.+
T Consensus 156 ~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~~----------~~~~v~d-- 223 (473)
T 2zy9_A 156 EAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVAD----------PRTRVAE-- 223 (473)
T ss_dssp BSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHSC----------TTSBGGG--
T ss_pred CHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcCC----------CCCcHHH--
Confidence 56677999999999999999999999985 578999999889999999999997521 1245555
Q ss_pred hcCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 417 QLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 417 ~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
+|.++++++++++++.+|+++|.+++.+++|||| ++|+++|+||..||++.+.
T Consensus 224 -----------im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVD-e~g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 224 -----------IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD-EEGRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp -----------TSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred -----------HhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEc-CCCEEEEEEehHhhHHHHH
Confidence 7777899999999999999999999999999999 5899999999999998874
No 102
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.44 E-value=1.7e-13 Score=120.85 Aligned_cols=118 Identities=9% Similarity=0.124 Sum_probs=95.7
Q ss_pred CeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccccccc
Q 011558 260 PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTW 339 (483)
Q Consensus 260 ~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~~~ 339 (483)
+++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..||++++...... ... ...
T Consensus 25 ~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~---~~---~lvGivt~~dl~~~~~~~~~~----------~~~----~~~ 84 (159)
T 1yav_A 25 KVAHVQVGNNLEHALLVLTKTGYTAIPVLDP---SY---RLHGLIGTNMIMNSIFGLERI----------EFE----KLD 84 (159)
T ss_dssp GSCCEETTCBHHHHHHHHHHHCCSEEEEECT---TC---BEEEEEEHHHHHHHHBCSSSB----------CGG----GTT
T ss_pred ceEEECCCCcHHHHHHHHHhCCCcEEEEECC---CC---CEEEEeEHHHHHHHhhhhccc----------chh----hhc
Confidence 6888999999999999999999999999964 45 899999999999876431100 000 001
Q ss_pred ccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 011558 340 VPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (483)
Q Consensus 340 ~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~ 399 (483)
...+.++|.+++.++.+++++.+|+++|.++++ +||+|++|+++|+||++||++.+..
T Consensus 85 ~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~ 142 (159)
T 1yav_A 85 QITVEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNK 142 (159)
T ss_dssp TSBHHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred cCCHHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 124566688899999999999999999998876 9999989999999999999986653
No 103
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.44 E-value=6.8e-13 Score=128.28 Aligned_cols=121 Identities=17% Similarity=0.245 Sum_probs=101.5
Q ss_pred ccCCCCCCCCCCCeEEeCCCCCHHHHHHHHHhC-----CCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCC
Q 011558 248 RQMDGNGRPCPRPLVQAGPYDSLKEVALKILQN-----KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS 322 (483)
Q Consensus 248 ~~~d~~g~~~~~~~v~v~~~~sl~~a~~~m~~~-----~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~ 322 (483)
+....+|.+|.++++++.+++++.+|++.|.++ +++++||++. ++ +++|++|.+|++...
T Consensus 132 ~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~---~~---~lvGivt~~dll~~~--------- 196 (278)
T 2yvy_A 132 YEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE---KG---RLKGVLSLRDLIVAD--------- 196 (278)
T ss_dssp SCTTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECT---TC---BEEEEEEHHHHHHSC---------
T ss_pred CCcchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECC---CC---CEEEEEEHHHHhcCC---------
Confidence 344555668888999999999999999999987 7899999954 35 899999999987530
Q ss_pred CCcccccccccccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 011558 323 SLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (483)
Q Consensus 323 ~~~~~~~~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~ 399 (483)
... .++++|.++++++.+++++.+|+++|.+++.+.+||+|++|+++|+||..|++..+.+
T Consensus 197 ----~~~------------~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 197 ----PRT------------RVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp ----TTC------------BSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC--
T ss_pred ----CCC------------cHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 012 3455588889999999999999999999999999999999999999999999986653
No 104
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.44 E-value=7e-13 Score=125.58 Aligned_cols=139 Identities=11% Similarity=0.082 Sum_probs=101.7
Q ss_pred CCCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCC------------
Q 011558 255 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS------------ 322 (483)
Q Consensus 255 ~~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~------------ 322 (483)
.+|.++++++.+++++.+|+++|.+++++.+||+++ .+++ +++|+||.+||++++.........
T Consensus 17 diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~-~~~~---~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~~~~ 92 (250)
T 2d4z_A 17 DIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDT-PDTN---TLLGSIDRTEVEGLLQRRISAYRRQPAAAAEADEEG 92 (250)
T ss_dssp SSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBCCC-
T ss_pred HhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEec-CCCC---eEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcccccc
Confidence 468899999999999999999999999999999953 2234 799999999999887543210000
Q ss_pred ---------------CCcccccc--------------------------------------------------ccc--cc
Q 011558 323 ---------------SLPILQQP--------------------------------------------------VSS--IQ 335 (483)
Q Consensus 323 ---------------~~~~~~~~--------------------------------------------------v~~--l~ 335 (483)
...++... ..+ +.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 172 (250)
T 2d4z_A 93 RNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEEMLT 172 (250)
T ss_dssp --------------------------------------------------------------------------CCSCCB
T ss_pred cccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccccccC
Confidence 00000000 000 00
Q ss_pred ---ccc-----ccccc--c-cccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 336 ---LGT-----WVPRI--G-EANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 336 ---i~~-----~~~~v--~-~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
+.. ....| . .+|.+.++++.+++++.+|..+|...+++++||++ .|+++|+||+.||++++.
T Consensus 173 ~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 173 LEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIE 245 (250)
T ss_dssp HHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred hhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 000 01122 2 35888999999999999999999999999999997 799999999999999776
No 105
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.43 E-value=4.5e-14 Score=151.67 Aligned_cols=139 Identities=16% Similarity=0.074 Sum_probs=102.8
Q ss_pred cccccccC--CCeeEecCCCCHHHHHHHHH-hCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccc-cccc---------c
Q 011558 341 PRIGEANG--RPFAMLRPTASLGSALALLV-QADVSSIPIVDDNDSLLDIYSRSDITALAKDKAY-AQIH---------L 407 (483)
Q Consensus 341 ~~v~~~m~--~~~~~v~~~~~l~~a~~~m~-~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~-~~~~---------l 407 (483)
.+++|+|. +++.++++++++.++.+.|. +++++.+||+|++++++|+++++|+++....... .... .
T Consensus 453 ~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~~ 532 (632)
T 3org_A 453 MTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLL 532 (632)
T ss_dssp SBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC-----------------
T ss_pred CcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhcccccccccceecc
Confidence 46788899 88999999999999999999 7999999999999999999999999985543210 0000 0
Q ss_pred CCcc----HHHHHhcC---------------CCCCCCc-ccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeE
Q 011558 408 DEMN----IHQALQLG---------------QDANPSL-GFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRV 467 (483)
Q Consensus 408 ~~~~----v~~~l~~~---------------~~~~~~~-~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l 467 (483)
.... +....... ..+..+. ++|+++++++++++++.+|+++|.+++++++||+| +|++
T Consensus 533 ~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve--~G~l 610 (632)
T 3org_A 533 DAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTE--RGKL 610 (632)
T ss_dssp --------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEE--TTEE
T ss_pred CHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEE--CCEE
Confidence 0000 00100000 0001112 38999999999999999999999999999999996 5999
Q ss_pred EEEEehHHHHHHHh
Q 011558 468 EGIISLSDVFRFLL 481 (483)
Q Consensus 468 ~GiIs~~DIl~~l~ 481 (483)
+||||++||++.+.
T Consensus 611 vGIVT~~Dll~~~~ 624 (632)
T 3org_A 611 VGIVEREDVAYGYS 624 (632)
T ss_dssp EEEEEGGGTEECCC
T ss_pred EEEEehhhHHHHHh
Confidence 99999999987653
No 106
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.42 E-value=6.9e-13 Score=128.71 Aligned_cols=121 Identities=14% Similarity=0.186 Sum_probs=101.9
Q ss_pred ccCCCCCCCCCCCeEEeCCCCCHHHHHHHHHhC-----CCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCC
Q 011558 248 RQMDGNGRPCPRPLVQAGPYDSLKEVALKILQN-----KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS 322 (483)
Q Consensus 248 ~~~d~~g~~~~~~~v~v~~~~sl~~a~~~m~~~-----~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~ 322 (483)
+....+|.+|.++++++.+++++.+|++.|.++ +++++||+|. +| +++|+||.+|+++..
T Consensus 134 ~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~---~~---~lvGivt~~dll~~~--------- 198 (286)
T 2oux_A 134 YEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQ---EN---HLVGVISLRDLIVND--------- 198 (286)
T ss_dssp SCTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECT---TC---BEEEEEEHHHHTTSC---------
T ss_pred CChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcC---CC---eEEEEEEHHHHHcCC---------
Confidence 334445557888999999999999999999987 8899999954 45 899999999987531
Q ss_pred CCcccccccccccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 011558 323 SLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (483)
Q Consensus 323 ~~~~~~~~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~ 399 (483)
... .++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|+||..|++..+.+
T Consensus 199 ----~~~------------~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 199 ----DDT------------LIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp ----TTS------------BHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred ----CCC------------cHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 112 3455588899999999999999999999999999999999999999999999986653
No 107
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.42 E-value=9e-13 Score=118.90 Aligned_cols=133 Identities=10% Similarity=0.127 Sum_probs=98.9
Q ss_pred eEEe--CCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCC----Ccccccccccc
Q 011558 261 LVQA--GPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSS----LPILQQPVSSI 334 (483)
Q Consensus 261 ~v~v--~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~----~~~~~~~v~~l 334 (483)
++++ .+++++.+|++.|.+++++.+||+++ .++| +++|+||..|+++.+.......... ...+.....+.
T Consensus 25 ~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~-d~~~---~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (185)
T 2j9l_A 25 LLTVLTQDSMTVEDVETIISETTYSGFPVVVS-RESQ---RLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPL 100 (185)
T ss_dssp CCCCEESSCEEHHHHHHHHHHCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHHHHTSCSCCCTTCEEECSSSCCCC
T ss_pred eEEEecCCCccHHHHHHHHHhcCCCceeEEEE-CCCC---eEEEEEEHHHHHHHHHhhcccCCCccccceeecccCCccc
Confidence 6778 99999999999999999999999931 1245 8999999999999876432110000 00000000000
Q ss_pred c-ccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 335 Q-LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 335 ~-i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
. .......++++|.+++.++.+++++.+|+++|.+++++.+||+| +|+++|+||++||++.+.
T Consensus 101 ~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~ 164 (185)
T 2j9l_A 101 PPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIA 164 (185)
T ss_dssp CTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred ccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 0 00122356778988999999999999999999999999999999 899999999999998665
No 108
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.40 E-value=2.3e-12 Score=133.65 Aligned_cols=121 Identities=17% Similarity=0.245 Sum_probs=103.2
Q ss_pred ccCCCCCCCCCCCeEEeCCCCCHHHHHHHHHhC-----CCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCC
Q 011558 248 RQMDGNGRPCPRPLVQAGPYDSLKEVALKILQN-----KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS 322 (483)
Q Consensus 248 ~~~d~~g~~~~~~~v~v~~~~sl~~a~~~m~~~-----~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~ 322 (483)
+..+.+|.+|.++++++++++++.+|++.|.++ +++++||+|+ ++ +++|++|.+|++..-
T Consensus 152 ~~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~---~~---~lvGiVt~~Dll~~~--------- 216 (473)
T 2zy9_A 152 YEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE---KG---RLKGVLSLRDLIVAD--------- 216 (473)
T ss_dssp SCTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECT---TS---BEEEEEEHHHHHHSC---------
T ss_pred CCCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECC---CC---cEEEEEEHHHHhcCC---------
Confidence 455667778999999999999999999999986 5799999954 35 899999999987520
Q ss_pred CCcccccccccccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 011558 323 SLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (483)
Q Consensus 323 ~~~~~~~~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~ 399 (483)
.+. +++++|.+++.++++++++.+|++.|.+++...+||+|++|+++|+||.+|+++...+
T Consensus 217 ----~~~------------~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 217 ----PRT------------RVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp ----TTS------------BGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred ----CCC------------cHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHH
Confidence 122 3455598899999999999999999999999999999999999999999999986653
No 109
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.39 E-value=1.5e-12 Score=135.85 Aligned_cols=115 Identities=16% Similarity=0.250 Sum_probs=100.9
Q ss_pred ccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcC--CCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCC
Q 011558 344 GEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDD--NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 421 (483)
Q Consensus 344 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~ 421 (483)
.+.|..+++++.+++++.+++++|.+++++++||+|+ +++++|+||.+|++.. . -.+.++.+
T Consensus 116 ~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~---~------~~~~~V~~------- 179 (511)
T 3usb_A 116 ESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI---Q------DYSIKISD------- 179 (511)
T ss_dssp SSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC---C------CSSSBHHH-------
T ss_pred ccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh---c------cCCCcHHH-------
Confidence 3447778899999999999999999999999999998 8999999999999641 1 11356777
Q ss_pred CCCCcccCCC-cceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 422 ANPSLGFNGQ-RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 422 ~~~~~~~m~~-~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
+|.+ +++++.+++++.+++++|.+++++.+|||| ++|+++|+||+.||++.+.
T Consensus 180 ------vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVD-e~g~l~GiIT~~Dil~~~~ 233 (511)
T 3usb_A 180 ------VMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVD-NNGVLQGLITIKDIEKVIE 233 (511)
T ss_dssp ------HCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred ------hcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEe-CCCCEeeeccHHHHHHhhh
Confidence 6665 789999999999999999999999999999 5899999999999999874
No 110
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.33 E-value=5.3e-12 Score=131.86 Aligned_cols=115 Identities=19% Similarity=0.287 Sum_probs=100.8
Q ss_pred ccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEc--CCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCC
Q 011558 344 GEANGRPFAMLRPTASLGSALALLVQADVSSIPIVD--DNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 421 (483)
Q Consensus 344 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd--~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~ 421 (483)
.++|.+++.++.+++++.+++++|.+++++.+||+| ++++++|+|+.+|++.... .+.++.+
T Consensus 93 ~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~~---------~~~~v~~------- 156 (491)
T 1zfj_A 93 ENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFISD---------YNAPISE------- 156 (491)
T ss_dssp TTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCSC---------SSSBTTT-------
T ss_pred HhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhcc---------CCCcHHH-------
Confidence 456888999999999999999999999999999999 7899999999999985310 1234443
Q ss_pred CCCCcccCCC-cceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 422 ANPSLGFNGQ-RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 422 ~~~~~~~m~~-~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
+|.+ +++++.+++++.+++++|.+++++++|||| ++|+++|+||..||++.+.
T Consensus 157 ------im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd-~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 157 ------HMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVD-NSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp ------SCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred ------HcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc-CCCcEEEEEEHHHHHHHHh
Confidence 7776 788999999999999999999999999999 5899999999999999875
No 111
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.29 E-value=9.4e-13 Score=136.85 Aligned_cols=114 Identities=15% Similarity=0.269 Sum_probs=85.7
Q ss_pred ccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCCCC
Q 011558 344 GEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDAN 423 (483)
Q Consensus 344 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~~~ 423 (483)
.++|..+++++.+++++.+++++|.+++++.+||+|++++++|+||.+|++.. . . .+.++.+
T Consensus 92 ~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~---~---~---~~~~v~d--------- 153 (496)
T 4fxs_A 92 EAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV---T---D---LTKSVAA--------- 153 (496)
T ss_dssp CC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC---C---C---TTSBGGG---------
T ss_pred ccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc---c---c---CCCcHHH---------
Confidence 34578889999999999999999999999999999999999999999998621 0 0 1244554
Q ss_pred CCcccCC-C-cceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHH
Q 011558 424 PSLGFNG-Q-RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFL 480 (483)
Q Consensus 424 ~~~~~m~-~-~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l 480 (483)
+|. + +++++.+++++.+++++|.+++++.+|||| ++|+++|+||+.||++..
T Consensus 154 ----iM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD-e~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 154 ----VMTPKERLATVKEGATGAEVQEKMHKARVEKILVVN-DEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp ----TSEEGGGCCEEECC----CGGGTCC---CCCEEEEC-TTSBCCEEECCC-----C
T ss_pred ----HhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc-CCCCEEEeehHhHHHHhh
Confidence 665 3 588999999999999999999999999999 589999999999999864
No 112
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.27 E-value=4.1e-13 Score=140.20 Aligned_cols=113 Identities=14% Similarity=0.167 Sum_probs=0.0
Q ss_pred cCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCC---CcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCCCC
Q 011558 347 NGRPFAMLRPTASLGSALALLVQADVSSIPIVDDN---DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDAN 423 (483)
Q Consensus 347 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~---g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~~~ 423 (483)
|.++++++.+++++.+|+++|.+++++++||+|++ ++++|+||.+|++.. . . . .+.++.+
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~-~-~---~---~~~~V~d--------- 165 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID-L-T---Q---TETKVSD--------- 165 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh-h-c---c---ccCcHHH---------
Confidence 77789999999999999999999999999999987 899999999999863 1 0 0 1234454
Q ss_pred CCcccCCCc--ceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 424 PSLGFNGQR--CQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 424 ~~~~~m~~~--~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
+|.++ ++++.+++++.+|+++|.+++++++|||| ++|+++|+||++||++.+.
T Consensus 166 ----iM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVD-e~g~lvGiIT~~Dil~~~~ 220 (503)
T 1me8_A 166 ----MMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIID-DDQHLRYIVFRKDYDRSQV 220 (503)
T ss_dssp ------------------------------------------------------------
T ss_pred ----HhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEc-CCCeEEEEEEecHHHHhhh
Confidence 66655 89999999999999999999999999999 5899999999999998874
No 113
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.26 E-value=8.1e-12 Score=131.51 Aligned_cols=120 Identities=13% Similarity=0.138 Sum_probs=99.2
Q ss_pred CCCCCCeEEeCCC-CCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccc
Q 011558 255 RPCPRPLVQAGPY-DSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 333 (483)
Q Consensus 255 ~~~~~~~v~v~~~-~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~ 333 (483)
.+|.++++++.++ +++.+|+++|.+++++++||+| .+++ +++|+||.+||++.+...... ...
T Consensus 388 diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd--~~~g---~lvGiVt~~Dll~~l~~~~~~-------~~~---- 451 (527)
T 3pc3_A 388 ELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVD--QDDG---SVLGVVGQETLITQIVSMNRQ-------QSD---- 451 (527)
T ss_dssp GGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEEC--TTTC---CEEEEEEHHHHHHHHHHHCCC-------TTS----
T ss_pred HhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEE--CCCC---EEEEEEEHHHHHHHHHhccCc-------CCC----
Confidence 4678899999999 9999999999999999999995 1245 899999999999988643111 122
Q ss_pred ccccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCC----CcEEEEEeHHHHHHHHhcc
Q 011558 334 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDN----DSLLDIYSRSDITALAKDK 400 (483)
Q Consensus 334 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~----g~lvGiit~~di~~l~~~~ 400 (483)
.+.++|.++++++.+++++.+++++|.++++ +||+|++ |+++|+||+.||++.+.+.
T Consensus 452 --------~V~~im~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 452 --------PAIKALNKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp --------BGGGGEETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTC
T ss_pred --------cHHHHhcCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhc
Confidence 3455599999999999999999999976654 7999974 8999999999999977643
No 114
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.26 E-value=5e-13 Score=139.68 Aligned_cols=116 Identities=16% Similarity=0.285 Sum_probs=5.2
Q ss_pred cccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCCC
Q 011558 343 IGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDA 422 (483)
Q Consensus 343 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~~ 422 (483)
+.++|.++++++.+++++.+|+++|.+++++.+||+|++++++|+||.+|++.... .+.++.+
T Consensus 97 ~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~~---------~~~~v~~-------- 159 (494)
T 1vrd_A 97 TENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEKN---------LSKKIKD-------- 159 (494)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred HhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhcC---------CCCcHHH--------
Confidence 34568889999999999999999999999999999998899999999999986210 1234444
Q ss_pred CCCcccCCC--cceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 423 NPSLGFNGQ--RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 423 ~~~~~~m~~--~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
+|.+ +++++.+++++.+++++|.+++++++|||| ++|+++|+||..||++.+.
T Consensus 160 -----im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd-~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 160 -----LMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVS-KDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp -------------------------------------------------------CHHHHT
T ss_pred -----HhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHHhhhc
Confidence 6665 788999999999999999999999999999 5899999999999999874
No 115
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.25 E-value=6e-11 Score=123.73 Aligned_cols=115 Identities=13% Similarity=0.183 Sum_probs=96.9
Q ss_pred CCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccc
Q 011558 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (483)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (483)
+..+++++.+++++.+|+++|.+++++++||+++. .++ +++|+||.+|++.. .....+
T Consensus 119 m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g-~~~---~lvGiVt~rDl~~~------------~~~~~~------ 176 (511)
T 3usb_A 119 VISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNL-DER---KLVGIITNRDMRFI------------QDYSIK------ 176 (511)
T ss_dssp SSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCT-TTC---BEEEEEEHHHHTTC------------CCSSSB------
T ss_pred cccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecC-CCC---EEEEEEEehHhhhh------------ccCCCc------
Confidence 56678899999999999999999999999999531 134 89999999998530 011233
Q ss_pred cccccccccccCC-CeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 011558 337 GTWVPRIGEANGR-PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (483)
Q Consensus 337 ~~~~~~v~~~m~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~ 399 (483)
+.++|.+ +++++++++++.+++++|.+++++.+||+|++|+++|++|..|+++....
T Consensus 177 ------V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 177 ------ISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp ------HHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred ------HHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 4455887 89999999999999999999999999999999999999999999987653
No 116
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.24 E-value=7.2e-13 Score=137.60 Aligned_cols=114 Identities=14% Similarity=0.264 Sum_probs=1.3
Q ss_pred cccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCCC
Q 011558 343 IGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDA 422 (483)
Q Consensus 343 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~~ 422 (483)
+.++|..+++++.+++++.+|+++|.+++++.+||+| +++++|+||.+|+..... .+.++.+
T Consensus 90 ~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~~~---------~~~~V~~-------- 151 (490)
T 4avf_A 90 HETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVKPN---------AGDTVAA-------- 151 (490)
T ss_dssp CCC-----------------------------------------------------------------------------
T ss_pred cccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhccc---------cCCcHHH--------
Confidence 3455888899999999999999999999999999999 899999999999864211 1244555
Q ss_pred CCCcccCC-C-cceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHH
Q 011558 423 NPSLGFNG-Q-RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFL 480 (483)
Q Consensus 423 ~~~~~~m~-~-~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l 480 (483)
+|. + +++++.+++++.+|+++|.+++++.+|||| ++|+++|+||+.||++..
T Consensus 152 -----vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD-e~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 152 -----IMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVD-ENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp ------------------------------------------------------------
T ss_pred -----HhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEc-CCCcEEEEEehHHhhhhc
Confidence 665 3 588999999999999999999999999999 589999999999999874
No 117
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.20 E-value=1.4e-12 Score=136.13 Aligned_cols=156 Identities=15% Similarity=0.143 Sum_probs=18.1
Q ss_pred CCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccc
Q 011558 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (483)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (483)
|.++++++.+++++.+|+++|.+++++++||++++...+ +++|+||.+|+++. . .....
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g---~lvGiVt~~Dl~~~--~---------~~~~~------- 161 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHG---VLLGLVTQRDYPID--L---------TQTET------- 161 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCC---eEEEEEEHHHHHhh--h---------ccccC-------
Confidence 566889999999999999999999999999995411115 89999999998753 0 00122
Q ss_pred cccccccccccCCC--eeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHH
Q 011558 337 GTWVPRIGEANGRP--FAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQ 414 (483)
Q Consensus 337 ~~~~~~v~~~m~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~ 414 (483)
.+.++|.++ ++++.+++++.+|+++|.+++++.+||+|++|+++|+||.+||++......... + ....
T Consensus 162 -----~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~~~~----d-~~~~ 231 (503)
T 1me8_A 162 -----KVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHNELV----D-SQKR 231 (503)
T ss_dssp -----------------------------------------------------------------CCCCB----C-TTSC
T ss_pred -----cHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcccchh----c-cccc
Confidence 345558887 999999999999999999999999999999999999999999998554221100 0 0000
Q ss_pred HHhcCCCCCCCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEE
Q 011558 415 ALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVI 459 (483)
Q Consensus 415 ~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~V 459 (483)
++. ...+.. ....+.++.|.+.+++.+.|
T Consensus 232 -------------l~v--~a~v~~-~~~~e~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 232 -------------YLV--GAGINT-RDFRERVPALVEAGADVLCI 260 (503)
T ss_dssp -------------BCC--EEEECS-SSHHHHHHHHHHHTCSEEEE
T ss_pred -------------ccc--ccccCc-hhHHHHHHHHHhhhccceEE
Confidence 111 123344 66667788888889886544
No 118
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.16 E-value=3.1e-12 Score=130.08 Aligned_cols=109 Identities=19% Similarity=0.242 Sum_probs=0.0
Q ss_pred cCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcC---CCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCCCC
Q 011558 347 NGRPFAMLRPTASLGSALALLVQADVSSIPIVDD---NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDAN 423 (483)
Q Consensus 347 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~~~ 423 (483)
|..+++++.++.++.+|+++|.+++++.+||+|+ +++|+|++|.+|+... . . +.++.+
T Consensus 144 ~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~---d----~---~~~V~e--------- 204 (556)
T 4af0_A 144 FITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ---D----A---ETPIKS--------- 204 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc---c----c---ceEhhh---------
Confidence 5567889999999999999999999999999986 6799999999998641 1 1 234555
Q ss_pred CCcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHH
Q 011558 424 PSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRF 479 (483)
Q Consensus 424 ~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~ 479 (483)
+|+.+++++..+.++.+|.++|.++++..||||| ++++|+|+||+.|+++.
T Consensus 205 ----vMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd-~~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 205 ----VMTTEVVTGSSPITLEKANSLLRETKKGKLPIVD-SNGHLVSLVARSDLLKN 255 (556)
T ss_dssp --------------------------------------------------------
T ss_pred ----hcccceEEecCCCCHHHHHHHHHHccccceeEEc-cCCcEEEEEEechhhhh
Confidence 7877899999999999999999999999999999 58999999999999875
No 119
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.15 E-value=3e-11 Score=129.72 Aligned_cols=134 Identities=12% Similarity=0.063 Sum_probs=97.1
Q ss_pred CCC--CCeEEeCCCCCHHHHHHHHH-hCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCC--------
Q 011558 256 PCP--RPLVQAGPYDSLKEVALKIL-QNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSL-------- 324 (483)
Q Consensus 256 ~~~--~~~v~v~~~~sl~~a~~~m~-~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~-------- 324 (483)
+|. ++++++++++++.|+.+.|. +++++++||+|+ ++ +++|++|.+|+++.+...........
T Consensus 458 iM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~---~~---~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~ 531 (632)
T 3org_A 458 IMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDA---NG---YLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVL 531 (632)
T ss_dssp HCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCT---TC---BBCCEESHHHHTTTTTTC----------------
T ss_pred HhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEec---CC---eEEEEEEHHHHHHHHHHHhhhcccccccccceec
Confidence 456 78999999999999999999 799999999964 45 89999999999987754321100000
Q ss_pred ---ccccccccccc-----------------ccccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcE
Q 011558 325 ---PILQQPVSSIQ-----------------LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSL 384 (483)
Q Consensus 325 ---~~~~~~v~~l~-----------------i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~l 384 (483)
..+.+.++.+. +-...+++.++|++++.++++++++.+|+++|.+++++.+||+ ++|++
T Consensus 532 ~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~l 610 (632)
T 3org_A 532 LDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGKL 610 (632)
T ss_dssp ---------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTEE
T ss_pred cCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCEE
Confidence 00000111110 0011124788999999999999999999999999999999999 68999
Q ss_pred EEEEeHHHHHHH
Q 011558 385 LDIYSRSDITAL 396 (483)
Q Consensus 385 vGiit~~di~~l 396 (483)
+|+||++|+++.
T Consensus 611 vGIVT~~Dll~~ 622 (632)
T 3org_A 611 VGIVEREDVAYG 622 (632)
T ss_dssp EEEEEGGGTEEC
T ss_pred EEEEehhhHHHH
Confidence 999999999763
No 120
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.11 E-value=1.4e-11 Score=125.30 Aligned_cols=112 Identities=21% Similarity=0.267 Sum_probs=0.0
Q ss_pred CCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccccc
Q 011558 258 PRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLG 337 (483)
Q Consensus 258 ~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i~ 337 (483)
-.+++++.|+.++.||+++|.+++++.+||+++...++ +++||+|.+|+. +. . ...+
T Consensus 145 i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~---kLvGIvT~RD~r-f~-----d-------~~~~------- 201 (556)
T 4af0_A 145 ITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDS---KLLGIVTGRDVQ-FQ-----D-------AETP------- 201 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCC---EEEEEEeccccc-cc-----c-------cceE-------
Confidence 45678999999999999999999999999996533355 899999999963 21 1 1233
Q ss_pred ccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 011558 338 TWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 397 (483)
Q Consensus 338 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~ 397 (483)
+.++|+++++++....++.+|.++|.++++..+||||++++++|+||+.|+.+..
T Consensus 202 -----V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 202 -----IKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQ 256 (556)
T ss_dssp ------------------------------------------------------------
T ss_pred -----hhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhh
Confidence 4455999999999999999999999999999999999999999999999998744
No 121
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.11 E-value=6e-10 Score=116.26 Aligned_cols=115 Identities=15% Similarity=0.190 Sum_probs=97.8
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (483)
+|..+++++.+++++.+|++.|.+++++++||++. .+++ +++|+||.+|+++.. . ...
T Consensus 95 im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~~---~lvGivt~~Dl~~~~-----~-------~~~------ 152 (491)
T 1zfj_A 95 GVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVET-LANR---KLVGIITNRDMRFIS-----D-------YNA------ 152 (491)
T ss_dssp TTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESC-TTTC---BEEEEEEHHHHHHCS-----C-------SSS------
T ss_pred cCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEe-CCCC---EEEEEEEHHHHhhhc-----c-------CCC------
Confidence 46678899999999999999999999999999951 0245 899999999987531 0 122
Q ss_pred ccccccccccccCC-CeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 336 LGTWVPRIGEANGR-PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 336 i~~~~~~v~~~m~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
.+.++|.+ ++.++.+++++.+++++|.+++++.+||+|++|+++|++|..||++...
T Consensus 153 ------~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 153 ------PISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp ------BTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred ------cHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHh
Confidence 34555888 8899999999999999999999999999999999999999999999766
No 122
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.08 E-value=5.1e-11 Score=123.77 Aligned_cols=113 Identities=15% Similarity=0.172 Sum_probs=83.1
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (483)
.|..+++++++++++.+|+++|.+++++++||+++ ++ +++|+||.+|++.. . ....
T Consensus 94 ~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~---~~---~lvGiVt~rDL~~~------~------~~~~------ 149 (496)
T 4fxs_A 94 GVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTE---NN---ELVGIITGRDVRFV------T------DLTK------ 149 (496)
T ss_dssp --CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECS---SS---BEEEEEEHHHHTTC------C------CTTS------
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEcc---CC---EEEEEEEHHHHhhc------c------cCCC------
Confidence 35678899999999999999999999999999964 35 89999999998510 0 1122
Q ss_pred ccccccccccccC-C-CeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 336 LGTWVPRIGEANG-R-PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 336 i~~~~~~v~~~m~-~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
.+.++|+ + +++++.+++++.+++++|.++++..+||+|++|+++|+||+.|+++...
T Consensus 150 ------~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~ 208 (496)
T 4fxs_A 150 ------SVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAES 208 (496)
T ss_dssp ------BGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CC
T ss_pred ------cHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhc
Confidence 3445587 3 5889999999999999999999999999999999999999999998543
No 123
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=99.06 E-value=3.1e-10 Score=122.47 Aligned_cols=77 Identities=26% Similarity=0.433 Sum_probs=63.8
Q ss_pred ceEEEEEecCCCceEEEEeccCCCCCC-CCCCcCCCCCCeEEEEEEcCCceEEEEEEEcCeeeeCCCCCee----eCCCC
Q 011558 20 LVPVRFIWPNGGRRVSLSGSFTRWSEP-MPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRHDENQPHV----SGNYG 94 (483)
Q Consensus 20 ~~~~~f~~~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~l~~g~~~ykf~vdg~w~~d~~~~~~----~~~~g 94 (483)
..-|.|.||.+|+.++|.|+||+|.+. .+|++. ++.|.+++.||||.|+|||+|||+|..||.+|.. .++++
T Consensus 16 ~~~~~~~~~~~~~~~yl~G~Fn~w~~~~~~m~~~---g~~~~~~v~L~~G~y~Y~f~vdg~~~~dp~n~~~~~~~~~~~~ 92 (645)
T 4aef_A 16 VAEVEFSLIREGSYAYLLGDFNAFNEGSFRMEQE---GKNWKIKIALPEGVWHYAFSIDGKFVLDPDNPERRVYTRKGYK 92 (645)
T ss_dssp EEEEEEEEECCSSCEEEEETTTTTCTTSSEEEEC---SSEEEEEEEECSEEEEEEEEETTEEECCTTCCCEEEEEEGGGT
T ss_pred EEEEEEecCCCCeEEEEEEcCCCCCCCcccceEc---CCEEEEEEEeCCceEEEEEEECCeEecCCCCCCcccccccCcC
Confidence 567889999999999999999999974 467653 6899999999999999999999999999988844 24444
Q ss_pred CeeeE
Q 011558 95 VVNCV 99 (483)
Q Consensus 95 ~~nn~ 99 (483)
..+.+
T Consensus 93 ~~~~~ 97 (645)
T 4aef_A 93 FHREV 97 (645)
T ss_dssp EEEEE
T ss_pred cccce
Confidence 44443
No 124
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.05 E-value=1.8e-12 Score=136.09 Aligned_cols=117 Identities=20% Similarity=0.233 Sum_probs=68.1
Q ss_pred cccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcC---CCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcC
Q 011558 343 IGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDD---NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLG 419 (483)
Q Consensus 343 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~ 419 (483)
+.++|.++++++.+++++.+|+++|.+++++.+||+|+ +++++|+||.+|+...... ..+.++.+
T Consensus 110 ~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~-------~~~~~v~~----- 177 (514)
T 1jcn_A 110 FEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEK-------DHTTLLSE----- 177 (514)
T ss_dssp CCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC-------------------------
T ss_pred hhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhc-------cCCCCHHH-----
Confidence 44568888899999999999999999999999999997 5899999999998763210 01234444
Q ss_pred CCCCCCcccCCC--cceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHH
Q 011558 420 QDANPSLGFNGQ--RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFL 480 (483)
Q Consensus 420 ~~~~~~~~~m~~--~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l 480 (483)
+|.+ +++++.+++++.+++++|.+++++++|||| ++|+++|+||++||++.+
T Consensus 178 --------vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd-~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 178 --------VMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVN-DCDELVAIIARTDLKKNR 231 (514)
T ss_dssp -----------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEES-SSSCCC----CCCCSSCC
T ss_pred --------HhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEEC-CCCeEEEEEEHHHHHHHh
Confidence 6666 789999999999999999999999999999 589999999999998754
No 125
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.03 E-value=2.6e-11 Score=126.23 Aligned_cols=110 Identities=17% Similarity=0.323 Sum_probs=0.0
Q ss_pred cccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccCCccHHHHHhcCCCCCC
Q 011558 345 EANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANP 424 (483)
Q Consensus 345 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~~~~~~~~l~~~~v~~~l~~~~~~~~ 424 (483)
+.|..++.++.+++++.+++++|.+++++.+||+|+ ++++|+++.+|++. . . +.++.+
T Consensus 97 ~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~--~------~---~~~v~~---------- 154 (486)
T 2cu0_A 97 RLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA--R------E---GKLVKE---------- 154 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc--C------C---CCCHHH----------
Confidence 347778899999999999999999999999999997 99999999999875 1 0 234454
Q ss_pred CcccCCCcceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHH
Q 011558 425 SLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFL 480 (483)
Q Consensus 425 ~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l 480 (483)
+|.++++++.+++++.+++++|.+++++.+|||| ++|+++|+||..||++.+
T Consensus 155 ---im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd-e~g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 155 ---LMTKEVITVPESIEVEEALKIMIENRIDRLPVVD-ERGKLVGLITMSDLVARK 206 (486)
T ss_dssp --------------------------------------------------------
T ss_pred ---HccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEe-cCCeEEEEEEHHHHHHhh
Confidence 5666788999999999999999999999999999 589999999999999875
No 126
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.03 E-value=8e-11 Score=122.24 Aligned_cols=112 Identities=16% Similarity=0.175 Sum_probs=0.0
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (483)
.|..+++++++++++.+|+++|.+++++++||++ ++ +++|+||.+|++... ....
T Consensus 93 ~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd----~g---~lvGIVt~rDl~~~~------------~~~~------ 147 (490)
T 4avf_A 93 AIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE----QG---ELVGIVTGRDLRVKP------------NAGD------ 147 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE----CC---EEEEEEEhHHhhhcc------------ccCC------
Confidence 3567788999999999999999999999999995 34 899999999985211 0122
Q ss_pred ccccccccccccC-C-CeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 336 LGTWVPRIGEANG-R-PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 336 i~~~~~~v~~~m~-~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
.+.++|. + +++++.+++++.+|+++|.++++..+||+|++|+++|+||+.|+++...
T Consensus 148 ------~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 148 ------TVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp -----------------------------------------------------------------
T ss_pred ------cHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 3445588 4 6899999999999999999999999999999999999999999998654
No 127
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.01 E-value=8.9e-11 Score=122.60 Aligned_cols=114 Identities=18% Similarity=0.294 Sum_probs=5.0
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (483)
+|.++++++.+++++.+|++.|.+++++.+||+|+ ++ +++|+||.+|+++.- . ...
T Consensus 100 iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~---~~---~lvGivt~~Dl~~~~-----~-------~~~------ 155 (494)
T 1vrd_A 100 GIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDE---EG---RLVGLLTNRDVRFEK-----N-------LSK------ 155 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcC---CC---EEEEEEEHHHHHhhc-----C-------CCC------
Confidence 35678899999999999999999999999999964 35 899999999987520 0 122
Q ss_pred ccccccccccccCC--CeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 011558 336 LGTWVPRIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (483)
Q Consensus 336 i~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~~ 399 (483)
.+.++|.+ ++.++.+++++.+++++|.++++..+||+|++|+++|++|..|+++....
T Consensus 156 ------~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~ 215 (494)
T 1vrd_A 156 ------KIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEH 215 (494)
T ss_dssp -----------------------------------------------------------CHHHHTC
T ss_pred ------cHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhcc
Confidence 34555887 89999999999999999999999999999999999999999999987653
No 128
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.84 E-value=4.2e-10 Score=117.09 Aligned_cols=109 Identities=15% Similarity=0.326 Sum_probs=0.4
Q ss_pred CCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCcccccccccccc
Q 011558 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (483)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (483)
|..+++++.+++++.++++.|.+++++++||+++ + +++|+++.+|++. . ...
T Consensus 99 m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~----~---~lvGivt~~Dl~~---~-----------~~~------- 150 (486)
T 2cu0_A 99 IVEDVITIAPDETVDFALFLMEKHGIDGLPVVED----E---KVVGIITKKDIAA---R-----------EGK------- 150 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC----C---EEEEEEEHHHhcc---C-----------CCC-------
Confidence 5578899999999999999999999999999953 4 7999999999864 0 012
Q ss_pred cccccccccccCCCeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 337 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 337 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
.+.++|.+++.++.+++++.+++++|.+++++.+||+|++|+++|++|.+||++...
T Consensus 151 -----~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 151 -----LVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp -------------------------------------------------------------C
T ss_pred -----CHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 244458888999999999999999999999999999999999999999999998654
No 129
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.78 E-value=9.5e-09 Score=76.99 Aligned_cols=46 Identities=15% Similarity=0.341 Sum_probs=42.4
Q ss_pred eeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 011558 351 FAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 397 (483)
Q Consensus 351 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~ 397 (483)
++++.+++++.+|+++|.+++++++||+| +|+++|++|.+|+++.+
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~ 47 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKV 47 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHH
Confidence 57899999999999999999999999998 68999999999998643
No 130
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.75 E-value=2.5e-10 Score=119.73 Aligned_cols=117 Identities=17% Similarity=0.204 Sum_probs=65.6
Q ss_pred CCCCCeEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHHhhccCCCCCCccccccccccc
Q 011558 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (483)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (483)
+|.++++++.+++++.+|+++|.+++++.+||+|++..++ +++|+||.+|++.... .....
T Consensus 113 im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~---~lvGiVt~~Dl~~~~~----------~~~~~------ 173 (514)
T 1jcn_A 113 GFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGS---KLVGIVTSRDIDFLAE----------KDHTT------ 173 (514)
T ss_dssp TSCSSCCCCCC-----------------CEESCC-----------CCEECTTTTC-------------------------
T ss_pred ccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCC---EEEEEEEHHHHHhhhh----------ccCCC------
Confidence 4567788999999999999999999999999995311135 8999999999865210 00112
Q ss_pred ccccccccccccCC--CeeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 011558 336 LGTWVPRIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 397 (483)
Q Consensus 336 i~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~ 397 (483)
.+.++|.+ +++++.+++++.+++++|.++++..+||+|++|+++|++|++|+++..
T Consensus 174 ------~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 174 ------LLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNR 231 (514)
T ss_dssp -------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCC
T ss_pred ------CHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHh
Confidence 34555888 899999999999999999999999999999999999999999988643
No 131
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.75 E-value=1.6e-08 Score=75.68 Aligned_cols=47 Identities=26% Similarity=0.378 Sum_probs=42.7
Q ss_pred eEEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEEechhhHHHHHH
Q 011558 261 LVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCIC 314 (483)
Q Consensus 261 ~v~v~~~~sl~~a~~~m~~~~~~~ipVvd~d~~~g~~~~l~Giit~~dIl~~l~ 314 (483)
++++.|++++.+|+++|.+++++++||+++ | +++||+|.+||++.+.
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~----~---~lvGIvT~~Di~~~~~ 48 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG----D---EILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET----T---EEEEEEEHHHHHHHTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC----C---EEEEEEEHHHHHHHHH
Confidence 689999999999999999999999999953 4 8999999999987664
No 132
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=98.53 E-value=1.7e-07 Score=79.09 Aligned_cols=58 Identities=21% Similarity=0.437 Sum_probs=47.4
Q ss_pred cceEEEEEecC---CCceEEEEec---cCCCCC--CCCCCcCC--CCCCeEEEEEEcCCc-eEEEEEEE
Q 011558 19 ILVPVRFIWPN---GGRRVSLSGS---FTRWSE--PMPMSPSE--GCPAVFQIICRLPPG-HHQYKFYV 76 (483)
Q Consensus 19 ~~~~~~f~~~~---~~~~V~l~Gs---f~~W~~--~~~m~~~~--~~~~~~~~~~~l~~g-~~~ykf~v 76 (483)
..++|+|.... .++.|+|+|+ +.+|++ .++|...+ .....|++++.||+| .++|||++
T Consensus 7 ~~v~V~F~v~~~~~~ge~v~vvGs~~~LG~W~p~~av~L~~~~~~~~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 7 GPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp CCEEEEEEEECCCCTTCEEEEEESSGGGTTTCGGGCEECEECCTTCCSSEEEEEEEECTTCCEEEEEEE
T ss_pred CeEEEEEEEeeecCCCCEEEEEeCCCcCCCCCccccccccccccCCCCCeEEEEEEcCCCCcEEEEEEE
Confidence 45788888865 3789999999 999997 35888762 127899999999998 59999998
No 133
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.51 E-value=1.7e-07 Score=69.73 Aligned_cols=47 Identities=15% Similarity=0.320 Sum_probs=43.7
Q ss_pred eeEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 011558 351 FAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (483)
Q Consensus 351 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~di~~l~~ 398 (483)
+.++.+++++.+|+++|.+++++++||+|+ |+++|++|.+|+++.+.
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 578999999999999999999999999997 99999999999998654
No 134
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.48 E-value=3.5e-07 Score=68.02 Aligned_cols=47 Identities=17% Similarity=0.361 Sum_probs=44.0
Q ss_pred ceEEeCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHHHHh
Q 011558 433 CQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 481 (483)
Q Consensus 433 ~~~v~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~~l~ 481 (483)
++++.+++++.+|+++|.+++++++||+| + |+++|+||.+||++++.
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d-~-~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-G-DEILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-T-TEEEEEEEHHHHHHHTT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHH
Confidence 57899999999999999999999999999 4 99999999999999864
No 135
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=97.94 E-value=5.8e-06 Score=67.32 Aligned_cols=60 Identities=25% Similarity=0.472 Sum_probs=46.9
Q ss_pred CcceEEEEEecCC---CceEEEEeccC---CCCC--CCCCCcCCC--CCCeEEEEEEcCCc-eEEEEEEEc
Q 011558 18 SILVPVRFIWPNG---GRRVSLSGSFT---RWSE--PMPMSPSEG--CPAVFQIICRLPPG-HHQYKFYVD 77 (483)
Q Consensus 18 ~~~~~~~f~~~~~---~~~V~l~Gsf~---~W~~--~~~m~~~~~--~~~~~~~~~~l~~g-~~~ykf~vd 77 (483)
+..+.|+|...+. |++|+|+|+.. +|++ .++|..... .++.|++++.||+| .++|||++.
T Consensus 4 ~~~v~V~F~v~~~t~~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~~~~~~~~W~~~v~lp~~~~~eYKy~v~ 74 (108)
T 1ac0_A 4 PTAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIRI 74 (108)
T ss_dssp CCCCCEEEEEECCCCSSCCEECCCSSSTTCSSSGGGSCCBBCSSSSSSCSSCEEEECCCSSSCEECCCEEC
T ss_pred CCeEEEEEEEeeECCCCCEEEEEeCcHHHCCCCHHHCccccccccCCcCCeEEEEEEeCCCCeEEEEEEEE
Confidence 3457788887654 78899999854 8996 468887631 25889999999998 599999993
No 136
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=97.87 E-value=6e-05 Score=76.24 Aligned_cols=85 Identities=22% Similarity=0.292 Sum_probs=64.8
Q ss_pred cceEEEEEecCC-C-------ceEEEE--eccC---CCCCCCCCCcCCCCCCeEEEEEEcCCceE-EEEEEEc-------
Q 011558 19 ILVPVRFIWPNG-G-------RRVSLS--GSFT---RWSEPMPMSPSEGCPAVFQIICRLPPGHH-QYKFYVD------- 77 (483)
Q Consensus 19 ~~~~~~f~~~~~-~-------~~V~l~--Gsf~---~W~~~~~m~~~~~~~~~~~~~~~l~~g~~-~ykf~vd------- 77 (483)
....|+|.|.++ | ++|+|. |..+ +|.+ .+|.|..+ +|+|+.++.||+|-| .|.|+||
T Consensus 29 ~~~~vtF~~~~p~a~~~~~~~~~V~~~~~~~~d~~~~~~~-~~m~r~~~-~~~W~~t~~l~~~~~~~Y~~~~~~~~~~~~ 106 (403)
T 3c8d_A 29 EMFEVTFWWRDPQGSEEYSTIKRVWVYITGVTDHHQNSQP-QSMQRIAG-TDVWQWTTQLNANWRGSYCFIPTERDDIFS 106 (403)
T ss_dssp SEEEEEEEEECTTCSTTTCCCCEEEEEETTTC-------C-CBCEECTT-SSEEEEEEEEETTCEEEEEEEEESCCSTTC
T ss_pred CcEEEEEEeeCCCcccccCccceEEEECcCCCccccccCc-cccccCCC-CCeEEEEEEECCCcEEEEEEEecCcccccc
Confidence 356799999876 4 689998 3222 1222 47888533 799999999999999 9999999
Q ss_pred -----------------CeeeeCCCCCeeeCC-CCCeeeEEEeccCC
Q 011558 78 -----------------GEWRHDENQPHVSGN-YGVVNCVYIAVPQP 106 (483)
Q Consensus 78 -----------------g~w~~d~~~~~~~~~-~g~~nn~~~v~~~~ 106 (483)
|..+.||.+|..... .|...|++++ ...
T Consensus 107 ~~~~~~~~~r~~w~~~~~~~~~DP~n~~~~~~~~~~~~s~~~~-p~~ 152 (403)
T 3c8d_A 107 APSPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEM-PQA 152 (403)
T ss_dssp CC--CHHHHHHHHHHHGGGCBCCTTCSSEECCSSSSCEEEEEC-TTC
T ss_pred cccchHHHHHHHHHHhhcccccCCCCCCCCCCCCCcccccccC-CCC
Confidence 778899999977654 4888999999 653
No 137
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=97.32 E-value=0.00054 Score=73.10 Aligned_cols=67 Identities=25% Similarity=0.549 Sum_probs=50.9
Q ss_pred EEEEE-ecCCCceEEEEeccCCCCC-CCCCCcCCCCCCeEEEEEE-cCCceEEEEEEE---cCee--eeCCCCCeee
Q 011558 22 PVRFI-WPNGGRRVSLSGSFTRWSE-PMPMSPSEGCPAVFQIICR-LPPGHHQYKFYV---DGEW--RHDENQPHVS 90 (483)
Q Consensus 22 ~~~f~-~~~~~~~V~l~Gsf~~W~~-~~~m~~~~~~~~~~~~~~~-l~~g~~~ykf~v---dg~w--~~d~~~~~~~ 90 (483)
.|+|+ |...|++|.|+|+|++|+. .++|.+.. .+|+|++.++ +++|. .|+|.| ||.+ ..||......
T Consensus 26 gv~F~vwAP~A~~V~L~gdfn~~~~~~~~M~~~~-~~GvW~~~v~~~~~g~-~Y~f~i~~~~g~~~~~~DPya~~~~ 100 (617)
T 1m7x_A 26 GTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLRK-ESGIWELFIPGAHNGQ-LYKYEMIDANGNLRLKSDPYAFEAQ 100 (617)
T ss_dssp EEEEEEECSSCSCEEEEEGGGTSCTTTCBCCCCT-TTTEEEEEEETCCTTC-EEEEEEECTTSCEEEECCTTCSSEE
T ss_pred cEEEEEECCCCCEEEEEEEeCCCCCceeEeEECC-CCCEEEEEEcCCCCCC-EEEEEEEcCCCcEEEecCccceeec
Confidence 46674 6777999999999999975 46898732 3799999988 67787 499998 6774 5777655544
No 138
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=97.06 E-value=0.00066 Score=73.86 Aligned_cols=62 Identities=21% Similarity=0.484 Sum_probs=48.0
Q ss_pred EEEE-ecCCCceEEEEeccCCCCCC-CCCCcCCCCCCeEEEEEE-------cCCceEEEEEEEc---Cee--eeCCCCC
Q 011558 23 VRFI-WPNGGRRVSLSGSFTRWSEP-MPMSPSEGCPAVFQIICR-------LPPGHHQYKFYVD---GEW--RHDENQP 87 (483)
Q Consensus 23 ~~f~-~~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~-------l~~g~~~ykf~vd---g~w--~~d~~~~ 87 (483)
|+|. |...|++|+|+|+||+|+.. ++|.+.. .|+|++.++ +++|.+ |||.|+ |.| +.||-..
T Consensus 67 v~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~~--~GvW~~~v~~~~g~~~i~~g~~-Y~y~i~~~~g~~~~~~dpya~ 142 (755)
T 3aml_A 67 TIYREWAPAAQEAQLIGEFNNWNGAKHKMEKDK--FGIWSIKISHVNGKPAIPHNSK-VKFRFRHGGGAWVDRIPAWIR 142 (755)
T ss_dssp EEEEEECTTCSEEEEEEGGGTTCCTTCBCEECT--TSEEEEEEECBTTBCSSCTTEE-EEEEEECTTCCCEEECCTTCS
T ss_pred EEEEEECCCCCEEEEEEecCCCCCceeeceeCC--CCEEEEEEcccccccCCCCCCE-EEEEEECCCCcEEecCCcchh
Confidence 5664 78889999999999999864 6998754 799999998 677864 888886 455 3466444
No 139
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=96.99 E-value=0.00099 Score=71.88 Aligned_cols=67 Identities=31% Similarity=0.512 Sum_probs=49.8
Q ss_pred EEEEE-ecCCCceEEEEeccCCCCCC-CCCCcCCCCCCeEEEEEE-cCCceEEEEEEE---cCee--eeCCCCCeee
Q 011558 22 PVRFI-WPNGGRRVSLSGSFTRWSEP-MPMSPSEGCPAVFQIICR-LPPGHHQYKFYV---DGEW--RHDENQPHVS 90 (483)
Q Consensus 22 ~~~f~-~~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~-l~~g~~~ykf~v---dg~w--~~d~~~~~~~ 90 (483)
-|+|+ |...|++|.|+|+||+|+.. .||.+.. ..|+|++.++ +.+|. .|||.| ||+| +.||......
T Consensus 137 g~~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~~-~~GvW~~~i~~~~~g~-~Y~y~i~~~~g~~~~~~DPya~~~~ 211 (722)
T 3k1d_A 137 GVSFAVWAPNAKGVSLIGEFNGWNGHEAPMRVLG-PSGVWELFWPDFPCDG-LYKFRVHGADGVVTDRADPFAFGTE 211 (722)
T ss_dssp EEEEEEECTTCSEEEEEEGGGTTCCCSCBCEECG-GGCEEEEEEETCCTTC-EEEEEEECTTSCEEEECCTTCSSBC
T ss_pred eEEEEEECCCCCEEEEEeecCCCCCCcccCEEcC-CCCEEEEEeCCCCCCC-EEEEEEEcCCCcEEEeecccceeec
Confidence 35664 67779999999999999864 6998753 2599999987 77784 588888 5654 6777555443
No 140
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=96.45 E-value=0.0074 Score=47.99 Aligned_cols=64 Identities=16% Similarity=0.321 Sum_probs=48.9
Q ss_pred eEEEEEecCCCceEEEEeccC--CCCCC--CCCCcCCCCCCeEEEEEEcCCc-eEEEEEEEcCe--eeeCCCC
Q 011558 21 VPVRFIWPNGGRRVSLSGSFT--RWSEP--MPMSPSEGCPAVFQIICRLPPG-HHQYKFYVDGE--WRHDENQ 86 (483)
Q Consensus 21 ~~~~f~~~~~~~~V~l~Gsf~--~W~~~--~~m~~~~~~~~~~~~~~~l~~g-~~~ykf~vdg~--w~~d~~~ 86 (483)
-.+++.|..+.++|+|-..+. +|+.. ++|.+.. ++++++.+++||.| .++|+|. ||. |-.+...
T Consensus 5 ~~vtiyY~~g~~~vylHyg~~~g~Wt~~~~v~M~~~~-~~gw~~~TI~l~~g~~~~~~F~-dG~~~WDNn~g~ 75 (104)
T 2laa_A 5 NKVTIYYKKGFNSPYIHYRPAGGSWTAAPGVKMQDAE-ISGYAKITVDIGSASQLEAAFN-DGNNNWDSNNTK 75 (104)
T ss_dssp CEEEEEEECSSSSCEEEEEETTSCCCSSSCEECEEET-TTTEEEEEEECTTCSCEEEEEE-CSSSCEESTTTS
T ss_pred CEEEEEEcCCCCcEEEEEcCCCCCCCcCCcccccccc-CCCeEEEEEECCCCCEEEEEEe-CCCCcCcCCCCc
Confidence 457788888899999999986 79874 4776653 35655799999976 7999996 775 8776543
No 141
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=96.41 E-value=0.0047 Score=66.67 Aligned_cols=58 Identities=22% Similarity=0.500 Sum_probs=47.5
Q ss_pred CCcceEEEEEecC-----CCceEEEEeccC---CCCC--------CC-CCCcCCCCCCeEEEEEEcCCc-eEEEEEEE
Q 011558 17 GSILVPVRFIWPN-----GGRRVSLSGSFT---RWSE--------PM-PMSPSEGCPAVFQIICRLPPG-HHQYKFYV 76 (483)
Q Consensus 17 ~~~~~~~~f~~~~-----~~~~V~l~Gsf~---~W~~--------~~-~m~~~~~~~~~~~~~~~l~~g-~~~ykf~v 76 (483)
+...++|+|...+ .|++|+|+|+-. +|++ .+ +|...+ ...|+++++||+| .++|||++
T Consensus 578 ~~~~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a~~~l~~~~--~~~W~~~v~l~~~~~~eyKy~~ 653 (686)
T 1qho_A 578 SGTQTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNAQGPLLAPN--YPDWFYVFSVPAGKTIQFKFFI 653 (686)
T ss_dssp SSSEEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCCBCCCBCTT--TTSEEEEEEEETTCEEEEEEEE
T ss_pred CCCeEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhhhcccccCC--CCcEEEEEEeCCCCeEEEEEEE
Confidence 4467888898865 377999999987 7998 45 777654 6789999999998 59999998
No 142
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=96.05 E-value=0.031 Score=58.96 Aligned_cols=59 Identities=20% Similarity=0.323 Sum_probs=46.8
Q ss_pred CcceEEEEEecCC---CceEEEEeccC---CCCCC--CCCCcCCC--CCCeEEEEEEcCCc-eEEEEEEE
Q 011558 18 SILVPVRFIWPNG---GRRVSLSGSFT---RWSEP--MPMSPSEG--CPAVFQIICRLPPG-HHQYKFYV 76 (483)
Q Consensus 18 ~~~~~~~f~~~~~---~~~V~l~Gsf~---~W~~~--~~m~~~~~--~~~~~~~~~~l~~g-~~~ykf~v 76 (483)
+..++|+|...+. |++|+|+|+-. ||++. ++|...+- ++..|+++++||+| .++|||++
T Consensus 494 ~~~v~v~F~v~~~t~~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~~t~~~~~W~~~v~lp~~~~~eYKyvv 563 (599)
T 2vn4_A 494 PTSVAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVNYADNHPLWIGTVNLEAGDVVEYKYIN 563 (599)
T ss_dssp CSEEEEEEEEECCCCTTCEEEEEESSGGGTTTCTTTSEECBCTTCBTTBCEEEEEEEEETTCEEEEEEEE
T ss_pred CCeEEEEEEEeEEcCCCCEEEEEecccCCCCcChhheeecccccCCCCCCcEEEEEEcCCCCcEEEEEEE
Confidence 3457888888664 88999999886 89974 47877541 13789999999998 59999998
No 143
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=95.78 E-value=0.018 Score=62.14 Aligned_cols=57 Identities=26% Similarity=0.477 Sum_probs=47.1
Q ss_pred CcceEEEEEecC----CCceEEEEeccC---CCCCC--C-CCCc---CCCCCCeEEEEEEcCCc-eEEEEEEE
Q 011558 18 SILVPVRFIWPN----GGRRVSLSGSFT---RWSEP--M-PMSP---SEGCPAVFQIICRLPPG-HHQYKFYV 76 (483)
Q Consensus 18 ~~~~~~~f~~~~----~~~~V~l~Gsf~---~W~~~--~-~m~~---~~~~~~~~~~~~~l~~g-~~~ykf~v 76 (483)
...++|+|.... .|+.|+|+|+-. +|++. + +|.. .+ ...|++++.||.| .++|||++
T Consensus 577 ~~~v~v~f~v~~~~~~~ge~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~--~~~W~~~v~lp~~~~~eyK~v~ 647 (680)
T 1cyg_A 577 NDQVSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQVVYS--YPTWYIDVSVPEGKTIEFKFIK 647 (680)
T ss_dssp SCEEEEEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCSSSSC--TTCEEEEEEEESSCEEEEEEEE
T ss_pred CCeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCC--CCcEEEEEEeCCCCcEEEEEEE
Confidence 467899999865 388999999887 89964 5 6776 33 6799999999988 69999998
No 144
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=95.72 E-value=0.0095 Score=63.04 Aligned_cols=61 Identities=11% Similarity=0.049 Sum_probs=47.6
Q ss_pred CCcceEEEEE-ecCCCceEEE-EeccCCCCC----CCCCCcCC--CCCCeEEEEEEcCCceEEEEEEEc
Q 011558 17 GSILVPVRFI-WPNGGRRVSL-SGSFTRWSE----PMPMSPSE--GCPAVFQIICRLPPGHHQYKFYVD 77 (483)
Q Consensus 17 ~~~~~~~~f~-~~~~~~~V~l-~Gsf~~W~~----~~~m~~~~--~~~~~~~~~~~l~~g~~~ykf~vd 77 (483)
....+.++|. |...+++|.| .|+|++|+. .++|.+.. +..|+|++.++.....+.|||.|.
T Consensus 19 ~~~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~m~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i~ 87 (585)
T 1wzl_A 19 SETQLRVRLRAKKGDVVRCEVLYADRYASPEEELAHALAGKAGSDERFDYFEALLECSTKRVKYVFLLT 87 (585)
T ss_dssp ETTEEEEEEEEETTTCSEEEEEEECTTCCTTSCCEEEECEEEEECSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCccEEEEEECCCcCCCCCceEEEEEEEeecCCCEEEEEEEEECCCCeEEEEEEEE
Confidence 3466778874 6677999999 899999975 45898753 224579999998877899999984
No 145
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=95.48 E-value=0.008 Score=63.24 Aligned_cols=61 Identities=21% Similarity=0.233 Sum_probs=48.9
Q ss_pred EEEE-ecCCCceEEEEeccCCCCCCCCCCcCCCCCCeEEEEEE-cCCceEEEEEEEcCe-eeeCCCCCee
Q 011558 23 VRFI-WPNGGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICR-LPPGHHQYKFYVDGE-WRHDENQPHV 89 (483)
Q Consensus 23 ~~f~-~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~-l~~g~~~ykf~vdg~-w~~d~~~~~~ 89 (483)
++|+ |...|++|.|+|.|+ ..++|.+.+ +|+|++.++ +.+|. .|+|.|||. ...||.....
T Consensus 11 ~~f~vwap~a~~v~l~~~~~---~~~~m~~~~--~g~w~~~~~~~~~g~-~Y~~~~~~~~~~~DP~~~~~ 74 (558)
T 3vgf_A 11 VIFTLWAPYQKSVKLKVLEK---GLYEMERDE--KGYFTITLNNVKVRD-RYKYVLDDASEIPDPASRYQ 74 (558)
T ss_dssp EEEEEECTTCSCCEEEETTT---EEEECEECT--TCEEEEEESSCCTTC-EEEEECTTSCEECCTTCSCC
T ss_pred EEEEEECCCCCEEEEEEecC---ceeecccCC--CCEEEEEECCCCCCC-EEEEEEeCCccccCcchhhc
Confidence 4554 677799999999997 457998865 799999987 77885 699999997 7888866543
No 146
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=95.41 E-value=0.012 Score=62.34 Aligned_cols=62 Identities=21% Similarity=0.390 Sum_probs=48.5
Q ss_pred EEEE-EecCCCceEEEEeccCCCCCCCCCCcCCCCCCeEEEEEEcCCceEEEEEEEcCeeeeCCCCCeee
Q 011558 22 PVRF-IWPNGGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRHDENQPHVS 90 (483)
Q Consensus 22 ~~~f-~~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~l~~g~~~ykf~vdg~w~~d~~~~~~~ 90 (483)
.|+| +|...+++|.|+|+ + ..++|.+.+ .|+|++.+++.+|.+ |+|.|||....||......
T Consensus 35 ~~~f~vwap~a~~v~l~~~---~-~~~~m~~~~--~g~w~~~~~~~~g~~-Y~~~v~g~~~~DPya~~~~ 97 (602)
T 2bhu_A 35 GTRFRLWTSTARTVAVRVN---G-TEHVMTSLG--GGIYELELPVGPGAR-YLFVLDGVPTPDPYARFLP 97 (602)
T ss_dssp CEEEEEECSSCSSEEEEET---T-EEEECEEEE--TTEEEEEESCCTTCE-EEEEETTEEECCTTCSCCT
T ss_pred eEEEEEECCCCCEEEEEEc---C-CEEeCeeCC--CcEEEEEEECCCCcE-EEEEECCeEecCCCccccC
Confidence 4566 47777999999994 2 357998865 799999999888886 9999999777788665544
No 147
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=95.37 E-value=0.026 Score=60.79 Aligned_cols=57 Identities=28% Similarity=0.483 Sum_probs=47.3
Q ss_pred CcceEEEEEecC----CCceEEEEeccC---CCCC--CC-CCCc---CCCCCCeEEEEEEcCCc-eEEEEEEE
Q 011558 18 SILVPVRFIWPN----GGRRVSLSGSFT---RWSE--PM-PMSP---SEGCPAVFQIICRLPPG-HHQYKFYV 76 (483)
Q Consensus 18 ~~~~~~~f~~~~----~~~~V~l~Gsf~---~W~~--~~-~m~~---~~~~~~~~~~~~~l~~g-~~~ykf~v 76 (483)
...++|+|.... .|+.|+|+|+-. +|++ .+ +|.. .+ ...|++++.||.| .++|||++
T Consensus 581 ~~~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~--~~~W~~~v~lp~~~~~eyK~~~ 651 (683)
T 3bmv_A 581 GNQICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQVVYQ--YPTWYYDVSVPAGTTIQFKFIK 651 (683)
T ss_dssp SSEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSSSSC--TTSEEEEEEEETTCEEEEEEEE
T ss_pred CCeEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccCCCC--CCcEEEEEEeCCCCcEEEEEEE
Confidence 457899999866 388999999888 8996 45 7776 33 6799999999998 69999998
No 148
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=95.17 E-value=0.0082 Score=65.40 Aligned_cols=55 Identities=16% Similarity=0.281 Sum_probs=43.6
Q ss_pred EEEE-ecCCCceEEEEeccCCCCC-----CCCCCcCCCCCCeEEEEEE-cC------CceEEEEEEEcCee
Q 011558 23 VRFI-WPNGGRRVSLSGSFTRWSE-----PMPMSPSEGCPAVFQIICR-LP------PGHHQYKFYVDGEW 80 (483)
Q Consensus 23 ~~f~-~~~~~~~V~l~Gsf~~W~~-----~~~m~~~~~~~~~~~~~~~-l~------~g~~~ykf~vdg~w 80 (483)
|+|. |...|++|.|++ |++|.. .++|.+.. +|+|++.++ +. +|.|.|+|.|+|.|
T Consensus 18 ~~F~vwap~A~~V~l~l-~~~~~~~~~~~~~~m~~~~--~gvW~~~v~~~~~~~~~~~g~y~Y~y~v~g~~ 85 (750)
T 1bf2_A 18 ITFRVYSSQATRIVLYL-YSAGYGVQESATYTLSPAG--SGVWAVTVPVSSIKAAGITGAVYYGYRAWGPN 85 (750)
T ss_dssp EEEEEECSSCSEEEEEE-ESSSSSCCCSEEEECEECS--TTEEEEEEEHHHHHHTTCCSCCEEEEEEEBTT
T ss_pred EEEEEECCCCCEEEEEE-EccCCCCccceEEecccCC--CCEEEEEECCcccccccCCCCEEEEEEEEeee
Confidence 5664 777899999999 887653 35787754 699999887 56 89989999999753
No 149
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=95.09 E-value=0.035 Score=59.90 Aligned_cols=57 Identities=30% Similarity=0.505 Sum_probs=46.8
Q ss_pred CcceEEEEEecC----CCceEEEEeccC---CCCCC--C-CCCc---CCCCCCeEEEEEEcCCc-eEEEEEEE
Q 011558 18 SILVPVRFIWPN----GGRRVSLSGSFT---RWSEP--M-PMSP---SEGCPAVFQIICRLPPG-HHQYKFYV 76 (483)
Q Consensus 18 ~~~~~~~f~~~~----~~~~V~l~Gsf~---~W~~~--~-~m~~---~~~~~~~~~~~~~l~~g-~~~ykf~v 76 (483)
...++|+|.... .|+.|+|+|+-. +|++. + +|.. .. ...|++++.||.| .++|||++
T Consensus 584 ~~~v~v~f~v~~~~~~~g~~~~v~G~~~~LG~W~~~~a~~~l~~~~~~~--~~~W~~~v~lp~~~~~eyK~~~ 654 (686)
T 1d3c_A 584 GDQVSVRFVVNNATTALGQNVYLTGSVSELGNWDPAKAIGPMYNQVVYQ--YPNWYYDVSVPAGKTIEFKFLK 654 (686)
T ss_dssp SSEEEEEEEEECCCCCTTCEEEEEESSGGGTTTCGGGCBCCCBCSSSSC--TTCEEEEEEEETTCEEEEEEEE
T ss_pred CCeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCC--CCeEEEEEEeCCCCcEEEEEEE
Confidence 467899999865 388999999887 89963 5 6765 33 6799999999998 69999998
No 150
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=95.04 E-value=0.013 Score=62.05 Aligned_cols=61 Identities=21% Similarity=0.255 Sum_probs=47.8
Q ss_pred CCcceEEEEE-ecCCCceEEE-EeccCCCCC------CCCCCcCC--CCCCeEEEEEEcCCceEEEEEEEc
Q 011558 17 GSILVPVRFI-WPNGGRRVSL-SGSFTRWSE------PMPMSPSE--GCPAVFQIICRLPPGHHQYKFYVD 77 (483)
Q Consensus 17 ~~~~~~~~f~-~~~~~~~V~l-~Gsf~~W~~------~~~m~~~~--~~~~~~~~~~~l~~g~~~ykf~vd 77 (483)
....+.++|+ |...+++|.| .|+|++|+. .+||.+.+ +..|+|++.++.....+.|+|.|.
T Consensus 19 ~~~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~~~m~~~~~~~~~~~w~~~v~~~~~~~~Y~f~i~ 89 (588)
T 1j0h_A 19 DSETLHLRLRTKKDDIDRVELLHGDPYDWQNGAWQFQMMPMRKTGSDELFDYWFAEVKPPYRRLRYGFVLY 89 (588)
T ss_dssp SSSCEEEEEEEETTTCSEEEEEEECTTCEETTEECCEEEECEEEEECSSEEEEEEEECCTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCccEEEEEECCCCCccccccceEEEEeEEeecCCCeEEEEEEEECCCcEEEEEEEEE
Confidence 4567888886 6667999999 799999965 46998753 224579999988777889999885
No 151
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=94.89 E-value=0.035 Score=57.44 Aligned_cols=59 Identities=17% Similarity=0.268 Sum_probs=46.1
Q ss_pred CCcceEEEEEecC----CCceEEEEeccC---CCCCCC---CCCcCCCCCCeEEEEEEcCCce-EEEEEEE
Q 011558 17 GSILVPVRFIWPN----GGRRVSLSGSFT---RWSEPM---PMSPSEGCPAVFQIICRLPPGH-HQYKFYV 76 (483)
Q Consensus 17 ~~~~~~~~f~~~~----~~~~V~l~Gsf~---~W~~~~---~m~~~~~~~~~~~~~~~l~~g~-~~ykf~v 76 (483)
....++|+|...+ .|++|+|+|+-. ||++.. +|.... .++.|+++++||.|. ++|||++
T Consensus 416 t~~~v~V~F~v~~~~t~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~~-~p~~W~~~v~lp~~~~~eYKyv~ 485 (516)
T 1vem_A 416 GVTPVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYDS-HSNDWRGNVVLPAERNIEFKAFI 485 (516)
T ss_dssp SCCEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCSSSSCEECEEET-TTTEEEEEEEEETTCCEEEEEEE
T ss_pred ccCccceEEEEeeccCCCCCEEEEEeChhhhCCCChhhhceecccCC-CCCEEEEEEEECCCCcEEEEEEE
Confidence 4467899998754 389999999887 799752 565522 145999999999984 9999998
No 152
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=94.78 E-value=0.027 Score=60.33 Aligned_cols=53 Identities=21% Similarity=0.347 Sum_probs=41.7
Q ss_pred EEEE-ecCCCceEEEEeccCCCC--CCCCCCcCCCCCCeEEEEEE-cCCceEEEEEEEcCe
Q 011558 23 VRFI-WPNGGRRVSLSGSFTRWS--EPMPMSPSEGCPAVFQIICR-LPPGHHQYKFYVDGE 79 (483)
Q Consensus 23 ~~f~-~~~~~~~V~l~Gsf~~W~--~~~~m~~~~~~~~~~~~~~~-l~~g~~~ykf~vdg~ 79 (483)
++|+ |...|++|.|++ |+++. ..++|.+.. +|+|++.++ +.+|.+ |+|.|+|.
T Consensus 21 ~~F~vwap~A~~V~l~~-f~~~~~~~~~~m~~~~--~g~w~~~v~~~~~g~~-Y~y~v~~~ 77 (657)
T 2wsk_A 21 VNFTLFSAHAERVELCV-FDANGQEHRYDLPGHS--GDIWHGYLPDARPGLR-YGYRVHGP 77 (657)
T ss_dssp EEEEEECSSCSEEEEEE-ECTTCCEEEEECCEEE--TTEEEEEEETCCTTCE-EEEEEECC
T ss_pred EEEEEECCCCCEEEEEE-ECCCCCEEEEeCcCCC--CCEEEEEECCCCCCCE-EEEEEeee
Confidence 6664 677799999999 98765 246898654 799999886 677876 99999984
No 153
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=94.48 E-value=0.04 Score=59.68 Aligned_cols=55 Identities=18% Similarity=0.415 Sum_probs=42.3
Q ss_pred EEEEE-ecCCCceEEEEeccCCCCC-----CCCCCcCCCCCCeEEEEEE-cCCceEEEEEEEcCee
Q 011558 22 PVRFI-WPNGGRRVSLSGSFTRWSE-----PMPMSPSEGCPAVFQIICR-LPPGHHQYKFYVDGEW 80 (483)
Q Consensus 22 ~~~f~-~~~~~~~V~l~Gsf~~W~~-----~~~m~~~~~~~~~~~~~~~-l~~g~~~ykf~vdg~w 80 (483)
-|+|. |...|++|.|++ |+++.. .++|.+.. .|+|.+.++ +.+|.+ |+|.|+|.|
T Consensus 30 g~~F~vwap~A~~V~l~l-f~~~~~~~~~~~~~m~~~~--~gvw~~~v~~~~~g~~-Y~y~v~g~~ 91 (718)
T 2vr5_A 30 GVNFSLFSENAEKVELLL-YSLTNQKYPKEIIEVKNKT--GDIWHVFVPGLRPGQL-YAYRVYGPY 91 (718)
T ss_dssp EEEEEEECSSCSEEEEEE-CCSSCCSSCSEEEEECEES--SSEEEEEEETCCTTCE-EEEEEECCE
T ss_pred eEEEEEECCCCCEEEEEE-EcCCCCCCcceEEeCccCC--CCEEEEEeCCCCCCCE-EEEEEeeec
Confidence 36675 677799999999 876442 35887754 799999886 678887 999999854
No 154
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=93.14 E-value=0.087 Score=59.31 Aligned_cols=66 Identities=18% Similarity=0.229 Sum_probs=47.4
Q ss_pred EEEE-ecCCCceEEEEe-ccCCCCC-CCCCCcCCCCCCeEEEEEE-cCCceEEEEEEEc------Ce----eeeCCCCCe
Q 011558 23 VRFI-WPNGGRRVSLSG-SFTRWSE-PMPMSPSEGCPAVFQIICR-LPPGHHQYKFYVD------GE----WRHDENQPH 88 (483)
Q Consensus 23 ~~f~-~~~~~~~V~l~G-sf~~W~~-~~~m~~~~~~~~~~~~~~~-l~~g~~~ykf~vd------g~----w~~d~~~~~ 88 (483)
++|. |...|++|.|++ +|++|.. .++|.+.. ..|+|++.++ +.+|.+ |+|.|+ |. ...||....
T Consensus 306 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~m~~~~-~~GvW~~~v~~~~~G~~-Y~y~v~~~~p~~g~~~~~~~~DPYa~~ 383 (1083)
T 2fhf_A 306 VTFRVWAPTAQQVELVIYSADKKVIASHPMTRDS-ASGAWSWQGGSDLKGAF-YRYAMTVYHPQSRKVEQYEVTDPYAHS 383 (1083)
T ss_dssp EEEEEECTTCSEEEEEEECTTCCEEEEEECEECT-TTCEEEEEECGGGTTCE-EEEEEEEEETTTTEEEEEEECCTTCSC
T ss_pred EEEEEECCCCCEEEEEEEcCCCCccceEECeECC-CCCEEEEEECCCCCCCE-EEEEEEeecCCCCccccceecCCccce
Confidence 5555 777899999999 9999975 46888533 2699999875 567764 777775 33 467776554
Q ss_pred ee
Q 011558 89 VS 90 (483)
Q Consensus 89 ~~ 90 (483)
..
T Consensus 384 ~~ 385 (1083)
T 2fhf_A 384 LS 385 (1083)
T ss_dssp BC
T ss_pred ec
Confidence 44
No 155
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=92.89 E-value=0.091 Score=56.88 Aligned_cols=64 Identities=22% Similarity=0.354 Sum_probs=46.7
Q ss_pred EEEE-ecCCCceEEEEeccCCCCC-CCCCCcCCCCCCeEEEEEEc-CCceEEEEEEEc--Cee--eeCCCCCee
Q 011558 23 VRFI-WPNGGRRVSLSGSFTRWSE-PMPMSPSEGCPAVFQIICRL-PPGHHQYKFYVD--GEW--RHDENQPHV 89 (483)
Q Consensus 23 ~~f~-~~~~~~~V~l~Gsf~~W~~-~~~m~~~~~~~~~~~~~~~l-~~g~~~ykf~vd--g~w--~~d~~~~~~ 89 (483)
++|+ |...|++|.|++.|++|.. .++|.+.+ .|+|++.++- .+| ..|+|.|+ |.| ..||....+
T Consensus 115 ~~f~vwap~a~~V~l~~~~~~~~~~~~~m~~~~--~g~w~~~v~~~~~g-~~Y~f~v~~~g~~~~~~DPya~~~ 185 (718)
T 2e8y_A 115 TVFKVWAPAATSAAVKLSHPNKSGRTFQMTRLE--KGVYAVTVTGDLHG-YEYLFCICNNSEWMETVDQYAKAV 185 (718)
T ss_dssp EEEEEECTTCSEEEEEEECTTSCCEEEECEECG--GGEEEEEEESCCTT-CEEEEEEEETTEEEEECCTTCSSB
T ss_pred EEEEEECCCCCEEEEEEEcCCCcceEEeCccCC--CCEEEEEECCCCCC-CeEEEEEEeCCeEEEecCCccccc
Confidence 5664 7777999999999998865 36998865 6999998874 456 35666664 764 567755543
No 156
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=92.73 E-value=0.067 Score=59.33 Aligned_cols=53 Identities=15% Similarity=0.091 Sum_probs=37.6
Q ss_pred EEEE-ecCCCceEEEEeccCCCCCCC--CCCcCCCCCCeEEEEEE-cCCceEEEEEEEcC
Q 011558 23 VRFI-WPNGGRRVSLSGSFTRWSEPM--PMSPSEGCPAVFQIICR-LPPGHHQYKFYVDG 78 (483)
Q Consensus 23 ~~f~-~~~~~~~V~l~Gsf~~W~~~~--~m~~~~~~~~~~~~~~~-l~~g~~~ykf~vdg 78 (483)
|+|+ |...|++|.|++-+++|.+.. +|.+.+ +|+|++.++ +.+|. .|+|.|++
T Consensus 138 ~~F~vwAp~A~~V~l~l~~~~~~~~~~~~~~~~~--~g~W~~~~~~~~~g~-~Y~y~v~~ 194 (884)
T 4aio_A 138 VSLHLWAPTAQGVSVCFFDGPAGPALETVQLKES--NGVWSVTGPREWENR-YYLYEVDV 194 (884)
T ss_dssp EEEEEECTTCSEEEEEEESTTTSCEEEEEECEEE--TTEEEEEEEGGGTTC-EEEEEEEE
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCeeeeeeecCC--CCEEEEEECCCCCCC-EEEEEEeC
Confidence 5666 788899999999666666533 333333 799999987 45564 58888875
No 157
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=92.19 E-value=0.16 Score=54.84 Aligned_cols=65 Identities=14% Similarity=0.264 Sum_probs=47.0
Q ss_pred EEEE-ecCCCceEEEEe-ccCCCCC---CCCCCcCCCCCCeEEEEEEcC--Cc-----eEEEEEEEc--Ce--eeeCCCC
Q 011558 23 VRFI-WPNGGRRVSLSG-SFTRWSE---PMPMSPSEGCPAVFQIICRLP--PG-----HHQYKFYVD--GE--WRHDENQ 86 (483)
Q Consensus 23 ~~f~-~~~~~~~V~l~G-sf~~W~~---~~~m~~~~~~~~~~~~~~~l~--~g-----~~~ykf~vd--g~--w~~d~~~ 86 (483)
|+|+ |...|++|.|++ +|++|.. .++|.+.. .|+|++.++-. +| -+.|+|.|+ |. ...||..
T Consensus 26 v~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~~--~gvW~~~v~~~~~~g~~~~~g~~Y~y~v~~~~~~~~~~DPya 103 (714)
T 2ya0_A 26 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKGE--RGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYA 103 (714)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEECG--GGEEEEEECTTCSSSCSCCTTCEEEEEEEETTEEEEECCTTC
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCccceEEeCccCC--CCEEEEEECCccCCCccccCCcEEEEEEEeCCceEEecCCce
Confidence 5665 787899999999 8988864 47898854 79999888641 34 267888886 54 4577765
Q ss_pred Cee
Q 011558 87 PHV 89 (483)
Q Consensus 87 ~~~ 89 (483)
..+
T Consensus 104 ~~~ 106 (714)
T 2ya0_A 104 KSL 106 (714)
T ss_dssp SEE
T ss_pred eee
Confidence 543
No 158
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=92.04 E-value=0.028 Score=59.34 Aligned_cols=61 Identities=16% Similarity=0.206 Sum_probs=46.1
Q ss_pred CCcceEEEEE-ecCCCceEEE-EeccCCCCC---CCCCCcCCC--CCCeEEEEEEcCCceEEEEEEEc
Q 011558 17 GSILVPVRFI-WPNGGRRVSL-SGSFTRWSE---PMPMSPSEG--CPAVFQIICRLPPGHHQYKFYVD 77 (483)
Q Consensus 17 ~~~~~~~~f~-~~~~~~~V~l-~Gsf~~W~~---~~~m~~~~~--~~~~~~~~~~l~~g~~~ykf~vd 77 (483)
....+.++|. |...+++|.| .|+|++|+. .++|.+... ..|+|++.++.......|||.|.
T Consensus 19 ~~~~~~~~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~M~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i~ 86 (583)
T 1ea9_C 19 NGTTVHLRIRTKKDDMTAVYALAGDKYMWDHTMEYVPMTKLATDELFDYWECEVTPPYRRVKYGFLLQ 86 (583)
T ss_dssp SSSCEECCCEECTTCCSBEEEEEECSSSCTTTCEEEEECEEEECSSCEEECCEECCTTSCEEECBCCE
T ss_pred CCCEEEEEEEECCCCccEEEEEECCCcCCCCcEEEEEEEEEeccCCeEEEEEEEECCCceEEEEEEEE
Confidence 4456777774 6667999999 799999975 358987432 24679999988777788888873
No 159
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=91.98 E-value=0.029 Score=58.53 Aligned_cols=57 Identities=25% Similarity=0.433 Sum_probs=0.0
Q ss_pred CcceEEEEEe-cC---CCceEEEEeccC---CCCC--CCCCCc-CCCCCCeEEEEEEcCCc-eEEEEEEE
Q 011558 18 SILVPVRFIW-PN---GGRRVSLSGSFT---RWSE--PMPMSP-SEGCPAVFQIICRLPPG-HHQYKFYV 76 (483)
Q Consensus 18 ~~~~~~~f~~-~~---~~~~V~l~Gsf~---~W~~--~~~m~~-~~~~~~~~~~~~~l~~g-~~~ykf~v 76 (483)
...++|+|.. .+ .|++|+|+|+-. +|++ .++|.. .+ ...|++++.||+| .++|||++
T Consensus 428 ~~~v~v~F~v~~~~t~~G~~v~v~G~~~~LG~W~~~~a~~l~~~~~--~~~W~~~v~lp~~~~~eyKy~~ 495 (527)
T 1gcy_A 428 GALVSVSFRCDNGATQMGDSVYAVGNVSQLGNWSPAAALRLTDTSG--YPTWKGSIALPAGQNEEWKCLI 495 (527)
T ss_dssp ----------------------------------------------------------------------
T ss_pred CCEEEEEEEEecccCCCCCeEEEEcChhHhCCCCcccCccCccCCC--CCeEEEEEEeCCCCcEEEEEEE
Confidence 3568889986 33 388999999887 7987 458874 33 5789999999998 59999997
No 160
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=91.77 E-value=0.26 Score=54.77 Aligned_cols=61 Identities=26% Similarity=0.476 Sum_probs=45.6
Q ss_pred cceEEEEEecCCCceEEEEecc-------CCCCCCC---CCCcCCCCCCeEEEEEEcCCceEEEEEEEcCeee
Q 011558 19 ILVPVRFIWPNGGRRVSLSGSF-------TRWSEPM---PMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWR 81 (483)
Q Consensus 19 ~~~~~~f~~~~~~~~V~l~Gsf-------~~W~~~~---~m~~~~~~~~~~~~~~~l~~g~~~ykf~vdg~w~ 81 (483)
..+||..--...+..+.+.|+| .+|++.- -|.+.. +|.|+.+-.||+|.|+||+-++|.|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~w~p~~~~~~~~~~~--~~~y~~~~~l~~g~y~~kv~~~~~w~ 221 (921)
T 2wan_A 151 EKIPVTSAVSANPVTAVLVGDLQQALGAANNWSPDDDHTLLKKIN--PNLYQLSGTLPAGTYQYKIALDHSWN 221 (921)
T ss_dssp CEECEEEEEECCCCCEEEEETTSGGGTCSSSSCTTCGGGBCEEEE--TTEEEEEEEECSEEEEEEEEETTSSS
T ss_pred ccccccccccccccccccccchhhhccccccCCCCCCcceeeccC--CcceeeeeccCCcceeEEEeecCccc
Confidence 3556655555566678899977 4798753 333333 79999999999999999999998884
No 161
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=90.29 E-value=0.27 Score=52.08 Aligned_cols=62 Identities=24% Similarity=0.411 Sum_probs=46.1
Q ss_pred EEEE-ecCCCceEEEEeccCCCCCCCCCCcCCCCCCeEEEEEE-cCCceEEEEEEEc-CeeeeCCCCCeeeC
Q 011558 23 VRFI-WPNGGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICR-LPPGHHQYKFYVD-GEWRHDENQPHVSG 91 (483)
Q Consensus 23 ~~f~-~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~-l~~g~~~ykf~vd-g~w~~d~~~~~~~~ 91 (483)
++|+ |...|++|.|++ +|.. .||.+.+ +|+|++.++ +.+|. .|+|.|+ |....||......+
T Consensus 44 ~~F~vwap~a~~v~l~~---~~~~-~~m~~~~--~g~~~~~~~~~~~g~-~Y~y~v~~~~~~~DP~a~~~~~ 108 (618)
T 3m07_A 44 VRFRLWATGQQKVMLRL---AGKD-QEMQANG--DGWFTLDVAGVTPGT-EYNFVLSDGMVVPDPASRAQKT 108 (618)
T ss_dssp EEEEEECTTCSCEEEEE---TTEE-EECEECS--TTEEEEEEETCCTTC-EEEEEETTSCEECCTTCSCBSS
T ss_pred EEEEEECCCCCEEEEEE---CCCc-ccCeecC--CEEEEEEeCCCCCCC-EEEEEEeCCeEeccccceeeec
Confidence 5665 677799999998 3543 7998865 799999874 66775 6899995 55888887665543
No 162
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=90.21 E-value=0.12 Score=56.88 Aligned_cols=65 Identities=15% Similarity=0.197 Sum_probs=47.9
Q ss_pred EEEE-ecCCCceEEEEe-ccCCCCC---CCCCCcCCCCCCeEEEEEEcCCce-----EEEEEEEcC--e--eeeCCCCCe
Q 011558 23 VRFI-WPNGGRRVSLSG-SFTRWSE---PMPMSPSEGCPAVFQIICRLPPGH-----HQYKFYVDG--E--WRHDENQPH 88 (483)
Q Consensus 23 ~~f~-~~~~~~~V~l~G-sf~~W~~---~~~m~~~~~~~~~~~~~~~l~~g~-----~~ykf~vdg--~--w~~d~~~~~ 88 (483)
|+|+ |...|++|.|++ ++++|.. .++|.+.. +|+|++.+.+.+|. +.|+|.|++ . ...||....
T Consensus 146 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~~--~gvW~~~v~~~~G~~~~~g~~Y~yrv~~~~~~~~~~DPYA~~ 223 (877)
T 3faw_A 146 VEASLWSPSADSVTMIIYDKDNQNRVVATTPLVKNN--KGVWQTILDTKLGIKNYTGYYYLYEIKRGKDKVKILDPYAKS 223 (877)
T ss_dssp EEEEEECTTCSEEEEEEEETTEEEEEEEEEECEECT--TSEEEEEECGGGTCSCCTTCEEEEEEEETTEEEEECCTTCSC
T ss_pred EEEEEECCCCCEEEEEEEeCCCCccceeeeccccCC--CCEEEEEECCCCCCccCCCeEEEEEEeeCCceeEecCcccee
Confidence 5665 677799999998 7888853 47898854 79999999776662 678888863 3 567876554
Q ss_pred e
Q 011558 89 V 89 (483)
Q Consensus 89 ~ 89 (483)
+
T Consensus 224 ~ 224 (877)
T 3faw_A 224 L 224 (877)
T ss_dssp B
T ss_pred c
Confidence 3
No 163
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=89.82 E-value=0.35 Score=44.07 Aligned_cols=51 Identities=16% Similarity=0.123 Sum_probs=41.4
Q ss_pred CceEEEEeccCCCCC--CCCCCcCCCCCCeEEEEEEcCCceEEEEEEEcCeeee
Q 011558 31 GRRVSLSGSFTRWSE--PMPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRH 82 (483)
Q Consensus 31 ~~~V~l~Gsf~~W~~--~~~m~~~~~~~~~~~~~~~l~~g~~~ykf~vdg~w~~ 82 (483)
.+++|++|++++|.. ..+|.+....+|.|...+.|+.|. +|||.-+..|-.
T Consensus 12 p~~lY~vG~~~gW~~~~~~~m~~~~~~~g~y~~~~yl~ag~-~fKf~~~~~~~~ 64 (221)
T 4fch_A 12 PKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANS-EFKFGTKENEYI 64 (221)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECTTCTTEEEEEEEECTTE-EEEEESSTTCCB
T ss_pred cceEEEEecCCCCCCCccceeeeccCCCceEEEEEEEcCCC-eEEEeeccCccc
Confidence 567999999998864 358888776689999999998775 899998766643
No 164
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=89.58 E-value=0.25 Score=54.99 Aligned_cols=62 Identities=16% Similarity=0.275 Sum_probs=43.7
Q ss_pred EEE-EecCCCceEEEEeccCCCC----CCCCCCcCCCCCCeEEEEEE-cCCceEEEEEEE--cCe--eeeCCCCCe
Q 011558 23 VRF-IWPNGGRRVSLSGSFTRWS----EPMPMSPSEGCPAVFQIICR-LPPGHHQYKFYV--DGE--WRHDENQPH 88 (483)
Q Consensus 23 ~~f-~~~~~~~~V~l~Gsf~~W~----~~~~m~~~~~~~~~~~~~~~-l~~g~~~ykf~v--dg~--w~~d~~~~~ 88 (483)
++| +|...|++|.|++ |++|. ..++|.+.+ .|+|++.++ +.+|. .|+|.| +|. ++.||....
T Consensus 327 v~F~vwaP~A~~V~l~l-f~~~~~~~~~~~~m~~~~--~gvW~~~v~~~~~g~-~Y~y~v~~~g~~~~~~DPya~~ 398 (921)
T 2wan_A 327 TSFRVWAPTASNVQLLL-YNSEKGSITKQLEMQKSD--NGTWKLQVSGNLENW-YYLYQVTVNGTTQTAVDPYARA 398 (921)
T ss_dssp EEEEEECTTCSEEEEEE-ESSSSSCCSEEEECEECG--GGEEEEEEESCCTTC-EEEEEEECSSCEEEECCTTCSS
T ss_pred EEEEEECCCCCEEEEEE-EeCCCCCcCeEEeCeeCC--CCEEEEEEccCCCCC-EEEEEEEeCCeEEEecCCccee
Confidence 445 4677799999998 99995 246898865 699999887 45564 366666 565 456775543
No 165
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=88.64 E-value=0.35 Score=51.49 Aligned_cols=50 Identities=12% Similarity=0.151 Sum_probs=37.4
Q ss_pred cCCCceEEEEeccCCCCC-CCCCCc--CC--CCCCeEEEEEEcCCceEEEEEEEcC
Q 011558 28 PNGGRRVSLSGSFTRWSE-PMPMSP--SE--GCPAVFQIICRLPPGHHQYKFYVDG 78 (483)
Q Consensus 28 ~~~~~~V~l~Gsf~~W~~-~~~m~~--~~--~~~~~~~~~~~l~~g~~~ykf~vdg 78 (483)
...+++|.|++.|++ +. .++|.+ .. +..|+|++.++.......|+|.|+|
T Consensus 42 ap~a~~V~l~~~~~~-~~~~~~m~~~~~~~~~~~~~w~~~i~~~~~g~~Y~f~i~~ 96 (637)
T 1ji1_A 42 DITSANIKYWDTADN-AFHWVPMVWDSNDPTGTFDYWKGTIPASPSIKYYRFQIND 96 (637)
T ss_dssp CCSEEEEEEEETTTT-EEEEEECEEEEECTTSSEEEEEEEECCCSSCEEEEEEEEE
T ss_pred cCCeeEEEEEEecCC-CEEEEEeEEeeccccCCeeEEEEEEECCCceEEEEEEEEE
Confidence 456899999999874 32 368987 32 2347999999877667789999965
No 166
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=86.96 E-value=1.3 Score=34.89 Aligned_cols=61 Identities=15% Similarity=0.420 Sum_probs=41.9
Q ss_pred EEEEEecCCCceEEEEeccC--CCCCC--CCCCcCCCCCCeEEEEEEcCCc-eEEEEEEEcCe--eeeCC
Q 011558 22 PVRFIWPNGGRRVSLSGSFT--RWSEP--MPMSPSEGCPAVFQIICRLPPG-HHQYKFYVDGE--WRHDE 84 (483)
Q Consensus 22 ~~~f~~~~~~~~V~l~Gsf~--~W~~~--~~m~~~~~~~~~~~~~~~l~~g-~~~ykf~vdg~--w~~d~ 84 (483)
.+++.|..+..+|+|==.+. +|... ++|.+. .|.|+|+.+++|+.+ .++|.| =||. |-.+.
T Consensus 11 ~vTvyY~sg~~~~ylHy~~~~g~Wt~vpgv~M~~~-~~~Gw~~~TI~~~~~~~l~~~F-~dG~~~WDNN~ 78 (102)
T 2c3v_A 11 DITIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKS-EXEGXVKVTIEAEEGSQLRAAF-NNGSGQWDNNQ 78 (102)
T ss_dssp SEEEEEECCCSSCEEEEEETTCCBCCTTCEECEEC-SSTTEEEEEECCCTTCEEEEEE-ECSSSCEECGG
T ss_pred EEEEEEcCCCCcEEEEEeCCCCCcccCCCcCcccc-ccCCceEEEEecCCCceEEEEE-eCCCcccccCC
Confidence 34455556778887765565 38753 477664 358999999999975 688888 4544 87654
No 167
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=84.32 E-value=0.83 Score=51.24 Aligned_cols=63 Identities=14% Similarity=0.264 Sum_probs=44.7
Q ss_pred EEEE-ecCCCceEEEEe-ccCCCCC---CCCCCcCCCCCCeEEEEEEcC--Cc-----eEEEEEEEc--Ce--eeeCCCC
Q 011558 23 VRFI-WPNGGRRVSLSG-SFTRWSE---PMPMSPSEGCPAVFQIICRLP--PG-----HHQYKFYVD--GE--WRHDENQ 86 (483)
Q Consensus 23 ~~f~-~~~~~~~V~l~G-sf~~W~~---~~~m~~~~~~~~~~~~~~~l~--~g-----~~~ykf~vd--g~--w~~d~~~ 86 (483)
|+|+ |...|++|.|++ +|++|.. .++|.+.. .|+|++.++-. +| .+.|+|.|+ |. ...||..
T Consensus 333 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~~--~gvW~~~v~~~~~~g~~~~~G~~Y~y~i~~~~~~~~~~DPYa 410 (1014)
T 2ya1_A 333 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKGE--RGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYA 410 (1014)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEECG--GGEEEEEECTTCSSCCSCCTTCEEEEEEEETTEEEEECCTTC
T ss_pred EEEEEECCCCCEEEEEEEECCCCCccceEEecccCC--CCEEEEEEcccccCCccccCCcEEEEEEEeCCeEEEecCccc
Confidence 5664 677799999999 8998864 47898743 79999888642 23 256888885 54 4577754
Q ss_pred C
Q 011558 87 P 87 (483)
Q Consensus 87 ~ 87 (483)
.
T Consensus 411 ~ 411 (1014)
T 2ya1_A 411 K 411 (1014)
T ss_dssp S
T ss_pred e
Confidence 3
No 168
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=65.87 E-value=6 Score=40.08 Aligned_cols=48 Identities=13% Similarity=0.279 Sum_probs=36.7
Q ss_pred CceEEEEeccCCCCCC--CCCCcCCCCCCeEEEEEEcCCceEEEEEEEcCe
Q 011558 31 GRRVSLSGSFTRWSEP--MPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGE 79 (483)
Q Consensus 31 ~~~V~l~Gsf~~W~~~--~~m~~~~~~~~~~~~~~~l~~g~~~ykf~vdg~ 79 (483)
....||.|++++|+.. .+|.+....++.|++...+..+. +|||.-...
T Consensus 150 ~~~~YlvG~~~gW~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~fK~~~~~~ 199 (470)
T 4fe9_A 150 PDGYYIVGDFTGWDGNSAQQMKKDALDENLYILEAEIESTS-NFKIFPASA 199 (470)
T ss_dssp TTCEEEEETTTCSSGGGCEECEECSSCTTEEEEEEEESSCC-EEEEEEGGG
T ss_pred cceeEEEcccCCCCcccCeeeeeecCCCceEEEEEEeccCc-eEEEeeccc
Confidence 3568999999999853 36666655689999999987765 799996433
No 169
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.02 E-value=11 Score=31.96 Aligned_cols=49 Identities=16% Similarity=0.316 Sum_probs=35.8
Q ss_pred CceEEEEeccCCCCCCC--CCCcCCC-----CCCeEEEEEEcCC-----c--eEEEEEEEcCe
Q 011558 31 GRRVSLSGSFTRWSEPM--PMSPSEG-----CPAVFQIICRLPP-----G--HHQYKFYVDGE 79 (483)
Q Consensus 31 ~~~V~l~Gsf~~W~~~~--~m~~~~~-----~~~~~~~~~~l~~-----g--~~~ykf~vdg~ 79 (483)
.|+|+|-=+|++|+... ++..... ....|+..+.||+ + .+-.||.++|.
T Consensus 60 eK~V~VR~T~D~Wkt~~dv~a~y~~~~~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v~g~ 122 (156)
T 2eef_A 60 EKTVKIRMTFDTWKSYTDFPCQYVKDTYAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQ 122 (156)
T ss_dssp CCEEEEEEESSTTSSEEEEECEECCCSSSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEETTE
T ss_pred CcEEEEEEeECCCcccEEEEEEEccccCCCCCceEEEEEEECCCccCCCcEEEEEEEEEeCCC
Confidence 78899999999998643 4443321 1348999999986 3 46678889987
No 170
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=56.46 E-value=10 Score=38.34 Aligned_cols=53 Identities=25% Similarity=0.466 Sum_probs=38.3
Q ss_pred CceEEEEeccCCCCCC-------CCCCcCCCCCCeEEEEEEcCCceEEEEEEEcCeeeeCC
Q 011558 31 GRRVSLSGSFTRWSEP-------MPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRHDE 84 (483)
Q Consensus 31 ~~~V~l~Gsf~~W~~~-------~~m~~~~~~~~~~~~~~~l~~g~~~ykf~vdg~w~~d~ 84 (483)
...++++|++++|.-. .+|.+....++.|...+.+..| .+|||.-++.|-.+-
T Consensus 260 ~~~lyivG~~~~wg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-gefKF~~~~~W~~~~ 319 (470)
T 4fe9_A 260 PTELYMTGSAYNWGTPAGDPNAWKALVPVNGTKGTFWGIFYFAAN-DQVKFAPQANWGNDF 319 (470)
T ss_dssp CSCCEEEEGGGGGGCSTTCTTTCEECEECTTCTTEEEEEEEECTT-CEEEEESSSSSSSCB
T ss_pred cceEEEEeecccCCCCCCCcccccccccccCcCceEEEEEEECCC-ceEEEEecCCccccc
Confidence 4679999999987421 2354544457899888888654 589999998886654
No 171
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=54.16 E-value=40 Score=26.45 Aligned_cols=54 Identities=13% Similarity=0.209 Sum_probs=36.1
Q ss_pred CceEEEEec--cCCCCC-CC--CCCcC----CCCCCeEEEEEEcCCc-eEEEEEEEcCe--eeeCC
Q 011558 31 GRRVSLSGS--FTRWSE-PM--PMSPS----EGCPAVFQIICRLPPG-HHQYKFYVDGE--WRHDE 84 (483)
Q Consensus 31 ~~~V~l~Gs--f~~W~~-~~--~m~~~----~~~~~~~~~~~~l~~g-~~~ykf~vdg~--w~~d~ 84 (483)
.|+|.|-=| |++|+. .. +.... ...-..|+..+.||+. .+--+|.++|+ |-.+.
T Consensus 33 eK~V~VR~T~~~D~W~t~~~dv~a~y~~~~~~~~~D~F~F~i~l~~~~eFcIrY~v~g~eyWDNN~ 98 (106)
T 2djm_A 33 SKKVTVVYADGSDNWNNNGNIIAASFSGPISGSNYEYWTFSASVKGIKEFYIKYEVSGKTYYDNNN 98 (106)
T ss_dssp CEEEEEEEEETTSSCSSCCCEEECEEEEECTTSSCEEEEEEECCSSEEEEEEEEEESSCEEEECSS
T ss_pred CcEEEEEECCCcCCCccccEEEEEEEecCCCCCCeEEEEEEEECCCCeEEEEEEEECCcEEEcCCC
Confidence 567777777 999997 43 22211 1123589999999865 56778999997 65544
No 172
>4fem_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: ACX; 2.50A {Bacteroides thetaiotaomicron}
Probab=53.99 E-value=14 Score=35.91 Aligned_cols=51 Identities=16% Similarity=0.123 Sum_probs=39.6
Q ss_pred CceEEEEeccCCCCC--CCCCCcCCCCCCeEEEEEEcCCceEEEEEEEcCeeee
Q 011558 31 GRRVSLSGSFTRWSE--PMPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRH 82 (483)
Q Consensus 31 ~~~V~l~Gsf~~W~~--~~~m~~~~~~~~~~~~~~~l~~g~~~ykf~vdg~w~~ 82 (483)
....|+.|++.+|.- ..+|.+....+|.|...+.|+.| ..|||.-+..|-.
T Consensus 149 p~~lYlvG~~~~~~w~~~~~l~~~~~~~g~y~~~~yl~~~-~~fKf~~~~~~~~ 201 (358)
T 4fem_A 149 PKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDAN-SEFKFGTKENEYI 201 (358)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECTTSTTEEEEEEEECTT-EEEEEESSTTCCB
T ss_pred cceEEEeccccCCCCcccceeeeccCCCceEEEEEEecCC-ceEEeccccCCcc
Confidence 467999999997643 34787776668999999999876 5799988766644
No 173
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=49.92 E-value=16 Score=29.61 Aligned_cols=24 Identities=25% Similarity=0.570 Sum_probs=19.6
Q ss_pred EEEcCCc-eEEEEEEEcCeeeeCCCC
Q 011558 62 ICRLPPG-HHQYKFYVDGEWRHDENQ 86 (483)
Q Consensus 62 ~~~l~~g-~~~ykf~vdg~w~~d~~~ 86 (483)
++.|..| .|.|+| ++|+|+.+.+.
T Consensus 99 svtl~rG~t~~F~y-~~g~Wv~~gd~ 123 (126)
T 4dny_A 99 KVTLSVGNTLLFKY-VNGQWFRSGEL 123 (126)
T ss_dssp EEEECTTCEEEEEE-ETTEEEETTCC
T ss_pred EEEecCCCEEEEEE-cCCEEEEcccc
Confidence 4678888 699999 99999987653
No 174
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=45.98 E-value=8.8 Score=34.54 Aligned_cols=49 Identities=18% Similarity=0.224 Sum_probs=35.9
Q ss_pred ceEEEEec--cCCCCCC--CCCCcCCCCCCeEEEEEEcCCceEEEEEEEcCee
Q 011558 32 RRVSLSGS--FTRWSEP--MPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEW 80 (483)
Q Consensus 32 ~~V~l~Gs--f~~W~~~--~~m~~~~~~~~~~~~~~~l~~g~~~ykf~vdg~w 80 (483)
..|+|.|+ -++|... .+|......++.|.....|..|.++++|..+..|
T Consensus 117 ~~v~liG~at~~gW~~~~~~~~t~~~t~~g~~~~~~~l~~Ge~k~~~~~~~DW 169 (221)
T 4fch_A 117 AEVYLFGNTTGGSWAFNDEWKFTVPATKDGNFVSPAMTASGEVRMCFKTDLDW 169 (221)
T ss_dssp CCEEEEBGGGTSBCSCBGGGBCBCCSSTTCCEECCCCCSCEECEEEECCSSCG
T ss_pred ceEEEEEeecCCCCCCCcccceeeccCCCceEEeEEEecCCcEEEEEcCCCCc
Confidence 45999997 4579753 3565433447899988999999888877766555
No 175
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=45.13 E-value=37 Score=26.76 Aligned_cols=61 Identities=15% Similarity=0.297 Sum_probs=42.3
Q ss_pred CCcceEEEEEecCCC---ceEEEEe-ccCCCCCCCCCCcCCCCCCeEEEEEE-cCCceEEEEEEE-cCeeeeC
Q 011558 17 GSILVPVRFIWPNGG---RRVSLSG-SFTRWSEPMPMSPSEGCPAVFQIICR-LPPGHHQYKFYV-DGEWRHD 83 (483)
Q Consensus 17 ~~~~~~~~f~~~~~~---~~V~l~G-sf~~W~~~~~m~~~~~~~~~~~~~~~-l~~g~~~ykf~v-dg~w~~d 83 (483)
.+.-.-|.+.+-+++ ..|.|.| +=++|. ||.+. ...|+..-. ...|-+.||+.. ||+|...
T Consensus 24 np~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~---~M~rn---Ga~W~~~s~~~L~GplSfRvtts~G~~~va 90 (108)
T 2jnz_A 24 DPKKLVLDIKYTRPGDSLAEVELRQHGSEEWE---PLTKK---GNVWEVKSSKPLVGPFNFRFMSKGGMRNVF 90 (108)
T ss_dssp CSSEEEEEEEEEBTTBCEEEEEEECTTCCCCE---ECEEE---TTEEEEECSSCCCSSEEEEEEETTTEEEEE
T ss_pred CccEEEEEEEEeCCCCCEEEEEEEeCCCCcEe---Ecccc---CCEeEeCCCCCCCCCEEEEEEEcCCcEEEE
Confidence 355666777776654 4589996 667885 68886 468987651 345788888887 6877654
No 176
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=39.49 E-value=12 Score=25.29 Aligned_cols=13 Identities=46% Similarity=0.925 Sum_probs=10.6
Q ss_pred EcCeeeeCCCCCe
Q 011558 76 VDGEWRHDENQPH 88 (483)
Q Consensus 76 vdg~w~~d~~~~~ 88 (483)
|||+|.+|+.-.+
T Consensus 48 vdgeWsYD~ATkT 60 (65)
T 1mhx_A 48 VDGEWTYDDAAKT 60 (65)
T ss_dssp CCSEEEEETTTTE
T ss_pred CccEEEecCceeE
Confidence 6899999997664
No 177
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=38.00 E-value=54 Score=24.14 Aligned_cols=28 Identities=21% Similarity=0.392 Sum_probs=23.8
Q ss_pred CCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 011558 372 VSSIPIVDDNDSLLDIYSRSDITALAKD 399 (483)
Q Consensus 372 ~~~lpVvd~~g~lvGiit~~di~~l~~~ 399 (483)
...+=++|++|..+|+++..+.+.+..+
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e 40 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAAR 40 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHH
Confidence 4557799999999999999999987664
No 178
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=36.46 E-value=49 Score=24.34 Aligned_cols=26 Identities=15% Similarity=0.279 Sum_probs=21.2
Q ss_pred CCEEEEEeCCCCeEEEEEehHHHHHHH
Q 011558 454 VRRLVIVEAGSKRVEGIISLSDVFRFL 480 (483)
Q Consensus 454 ~~~l~VVd~~~~~l~GiIs~~DIl~~l 480 (483)
.+.+-+|| ++|..+|++++.+-++..
T Consensus 13 ~~eVrli~-~~Ge~lGv~~~~eAl~~A 38 (78)
T 1tif_A 13 AREVRLID-QNGDQLGIKSKQEALEIA 38 (78)
T ss_dssp CSEEEEEC-TTSCEEEEEEHHHHHHHH
T ss_pred CCEEEEEC-CCCcCCCcccHHHHHHHH
Confidence 35577899 589999999999988753
No 179
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=35.44 E-value=94 Score=23.99 Aligned_cols=60 Identities=15% Similarity=0.299 Sum_probs=42.1
Q ss_pred CcceEEEEEecCCC---ceEEEEeccC-CCCCCCCCCcCCCCCCeEEEEEE-cCCceEEEEEEE-cCeeeeC
Q 011558 18 SILVPVRFIWPNGG---RRVSLSGSFT-RWSEPMPMSPSEGCPAVFQIICR-LPPGHHQYKFYV-DGEWRHD 83 (483)
Q Consensus 18 ~~~~~~~f~~~~~~---~~V~l~Gsf~-~W~~~~~m~~~~~~~~~~~~~~~-l~~g~~~ykf~v-dg~w~~d 83 (483)
+.-.-|.+.+-+|+ .+|.|.|+=+ +|. ||.+ - ...|+..-. ...|-+.||+.. ||+|...
T Consensus 14 ~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~---~M~r-w--Ga~W~~~s~~~l~GplSfRvt~~~G~~~v~ 79 (100)
T 3ft1_A 14 PKKLVLDIKYTRPGDSLAEVELRQHGSEEWE---PLTK-K--GNVWEVKSSKPLVGPFNFRFMSKGGMRNVF 79 (100)
T ss_dssp TTEEEEEEEEECTTCCEEEEEEECTTCCCCE---ECEE-E--TTEEEEECSSCCCSSEEEEEEETTCCEEEE
T ss_pred cceEEEEEEEcCCCccEEEEEEEeCCCCCeE---Eecc-c--CCEeEeCCCCCCCCCEEEEEEEcCCcEEEE
Confidence 45566777776664 4488999987 795 6888 5 678987752 345778888876 7877653
No 180
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=33.82 E-value=18 Score=30.64 Aligned_cols=35 Identities=34% Similarity=0.672 Sum_probs=29.0
Q ss_pred HHHHHHHHHcCCCCEEEEEeCCCCeEEEEEehHHHHH
Q 011558 442 LHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFR 478 (483)
Q Consensus 442 l~~~~~~m~~~~~~~l~VVd~~~~~l~GiIs~~DIl~ 478 (483)
+.+.++.+.+.+-.-++|-. +++++|+|.++|.+|
T Consensus 121 ~~~~~~~la~~G~T~v~VA~--d~~l~GvIalaD~iK 155 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVE--GSRVLGVIALKDIVK 155 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEE--TTEEEEEEEEEECCC
T ss_pred HHHHHHHHHhCCCCEEEEEE--CCEEEEEEEEecCCC
Confidence 67778888899988888876 499999999998653
No 181
>2fqm_A Phosphoprotein, P protein; negative strand RNA virus, polymerase, replication, cofactor, viral protein; 2.30A {Vesicular stomatitis indiana virus} SCOP: d.378.1.1
Probab=32.93 E-value=20 Score=25.45 Aligned_cols=27 Identities=30% Similarity=0.497 Sum_probs=14.9
Q ss_pred eccCCCCCCCCCCcCCCCCCeEEEEEEcCCc
Q 011558 38 GSFTRWSEPMPMSPSEGCPAVFQIICRLPPG 68 (483)
Q Consensus 38 Gsf~~W~~~~~m~~~~~~~~~~~~~~~l~~g 68 (483)
|+|.+|+. |-.+.. .+.-+..+.+|.|
T Consensus 1 ~~~s~W~q--P~lk~~--g~~KsL~Lf~P~g 27 (75)
T 2fqm_A 1 GSHMDWKQ--PELESD--EHGKTLRLTLPEG 27 (75)
T ss_dssp ----CCCC--CEEEEE--TTEEEEEEECCSS
T ss_pred CCcccccC--ceeecC--CCCceEEEeCCCC
Confidence 79999975 333333 4667777888877
No 182
>2bem_A CBP21; chitin-binding protein, chitin degradation, chitin-binding, FNIII-like fold; 1.55A {Serratia marcescens} SCOP: b.1.18.2 PDB: 2lhs_A 2ben_A
Probab=31.89 E-value=82 Score=26.94 Aligned_cols=60 Identities=17% Similarity=0.408 Sum_probs=38.6
Q ss_pred EEEEEecCCCce------EEEEeccCCCCCCCCCCcCC--------------CCCCeEEEEEEcCCceEEEEEEEcCeee
Q 011558 22 PVRFIWPNGGRR------VSLSGSFTRWSEPMPMSPSE--------------GCPAVFQIICRLPPGHHQYKFYVDGEWR 81 (483)
Q Consensus 22 ~~~f~~~~~~~~------V~l~Gsf~~W~~~~~m~~~~--------------~~~~~~~~~~~l~~g~~~ykf~vdg~w~ 81 (483)
+++|+|.+.+.+ +||+- .+|++..||...+ ..++.++.++.||.|+--| ++|=..|.
T Consensus 76 ~~~f~w~~TA~H~t~~~~~YITK--~gwdp~~pLtw~dlel~pf~~~~~~~~~p~~~~~~~~~lP~~rsG~-hVI~~vWq 152 (170)
T 2bem_A 76 PNSFTWKLTARHSTTSWRYFITK--PNWDASQPLTRASFDLTPFCQFNDGGAIPAAQVTHQCNIPADRSGS-HVILAVWD 152 (170)
T ss_dssp EEEEEEEESSCCCEEEEEEEEEC--TTCCTTSCCCGGGEEEEEEEEEECTTCCCCSEEEEEEEECTTCCEE-EEEEEEEE
T ss_pred cEEEEEEeecccCCceEEEEECC--CCCCCCCCccHHHccccceeecCCCCcCCCceEEEEEEcCCCCccC-EEEEEEEE
Confidence 688889666433 66654 3677776775321 1135788889999865443 55557898
Q ss_pred eCC
Q 011558 82 HDE 84 (483)
Q Consensus 82 ~d~ 84 (483)
..+
T Consensus 153 ~~D 155 (170)
T 2bem_A 153 IAD 155 (170)
T ss_dssp ESS
T ss_pred ecc
Confidence 875
No 183
>1igd_A Protein G; immunoglobulin binding protein; 1.10A {Streptococcus SP} SCOP: d.15.7.1 PDB: 1igc_A 2igd_A 2igh_A 1qkz_A 2igg_A 1uwx_A 3mp9_A
Probab=31.46 E-value=20 Score=24.43 Aligned_cols=13 Identities=38% Similarity=0.790 Sum_probs=10.0
Q ss_pred EcCeeeeCCCCCe
Q 011558 76 VDGEWRHDENQPH 88 (483)
Q Consensus 76 vdg~w~~d~~~~~ 88 (483)
|||+|.+|+.-.+
T Consensus 44 vdgew~yd~atkt 56 (61)
T 1igd_A 44 VDGVWTYDDATKT 56 (61)
T ss_dssp CCCEEEEETTTTE
T ss_pred CCceEeecCceeE
Confidence 5899999986553
No 184
>4a02_A EFCBM33A, CBM33, chitin binding protein; chitin degradation, chitin oxidation; 0.95A {Enterococcus faecalis} SCOP: b.1.18.0
Probab=31.27 E-value=1.4e+02 Score=25.37 Aligned_cols=61 Identities=13% Similarity=0.371 Sum_probs=39.1
Q ss_pred EEEEEecCCCce------EEEEeccCCCCCCCCCCcCC------------CCCCeEEEEEEcCCceEEEEEEEcCeeeeC
Q 011558 22 PVRFIWPNGGRR------VSLSGSFTRWSEPMPMSPSE------------GCPAVFQIICRLPPGHHQYKFYVDGEWRHD 83 (483)
Q Consensus 22 ~~~f~~~~~~~~------V~l~Gsf~~W~~~~~m~~~~------------~~~~~~~~~~~l~~g~~~ykf~vdg~w~~d 83 (483)
+++|+|...+.+ +||+- .+|++..||...+ ..++.++.++.||.++--| ++|=..|...
T Consensus 75 ~~~f~w~~TA~H~t~~~~~YITK--~gwdp~~pLtw~dle~~~~~~~~~~~p~~~y~~~v~lP~~rsG~-hVI~~vWq~~ 151 (166)
T 4a02_A 75 PLDITWNLTAQHRTASWDYYITK--NGWNPNQPLDIKNFDKIASIDGKQEVPNKVVKQTINIPTDRKGY-HVIYAVWGIG 151 (166)
T ss_dssp EEEEEEEESSCCCEEEEEEEEEC--TTCCTTSCCCGGGEEEEEEEEEEEECCCSEEEEEEEECTTCCEE-EEEEEEEEES
T ss_pred ceEEEEeeecccCCCeEEEEEcC--CCCCCCCCccHHHCeeeeeecCCCcCCCCeEEEEEEeCCCCccC-EEEEEEEEec
Confidence 478888666543 66653 4788877886431 1145788889998653332 2556789887
Q ss_pred CC
Q 011558 84 EN 85 (483)
Q Consensus 84 ~~ 85 (483)
+.
T Consensus 152 Dt 153 (166)
T 4a02_A 152 DT 153 (166)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 185
>3fil_A Immunoglobulin G-binding protein G; dimerization, beta sheet, alpha helix, improved hydrophobic packing of core residues, protein binding; HET: FME; 0.88A {Streptococcus SP} SCOP: d.15.7.1 PDB: 2qmt_A 2jsv_X 2ju6_X 2k0p_A 2kq4_X 2kwd_A 2lgi_A 2gi9_A 1gb1_A 1pga_A 1pgb_A 2gb1_A 3gb1_A 2klk_A 2rmm_A 2onq_A 2on8_A 2j52_A 2j53_A 3v3x_A* ...
Probab=31.21 E-value=13 Score=24.65 Aligned_cols=12 Identities=50% Similarity=1.016 Sum_probs=9.1
Q ss_pred EcCeeeeCCCCC
Q 011558 76 VDGEWRHDENQP 87 (483)
Q Consensus 76 vdg~w~~d~~~~ 87 (483)
|||+|.+|+.-.
T Consensus 39 vdgeW~YD~ATk 50 (56)
T 3fil_A 39 VDGEWTYDDATK 50 (56)
T ss_dssp CCCEEEEEGGGT
T ss_pred CccEEEecCcee
Confidence 588898888554
No 186
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=26.50 E-value=45 Score=27.33 Aligned_cols=19 Identities=16% Similarity=0.151 Sum_probs=15.8
Q ss_pred EEEEEcCCceEEEEEEEcC
Q 011558 60 QIICRLPPGHHQYKFYVDG 78 (483)
Q Consensus 60 ~~~~~l~~g~~~ykf~vdg 78 (483)
++.++|+.|.+..||.-++
T Consensus 98 ~~~v~L~aG~ntI~l~~~~ 116 (139)
T 2w87_A 98 TIDVDLVQGNNIVQLSATT 116 (139)
T ss_dssp EEEEEECSEEEEEEEEESS
T ss_pred EEEEEECCCceEEEEEEcC
Confidence 4579999999999998754
No 187
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=26.01 E-value=47 Score=26.51 Aligned_cols=18 Identities=17% Similarity=0.217 Sum_probs=15.4
Q ss_pred EEEEEcCCceEEEEEEEc
Q 011558 60 QIICRLPPGHHQYKFYVD 77 (483)
Q Consensus 60 ~~~~~l~~g~~~ykf~vd 77 (483)
++.+.|+.|.|..||..+
T Consensus 97 ~~~v~L~aG~ntI~l~~~ 114 (127)
T 2vzp_A 97 TVRVTLAAGVNKIKAVAT 114 (127)
T ss_dssp EEEEEECSEEEEEEEEEC
T ss_pred EEEEEECCCceEEEEEEe
Confidence 357999999999999875
No 188
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=25.86 E-value=38 Score=28.03 Aligned_cols=20 Identities=15% Similarity=0.245 Sum_probs=16.3
Q ss_pred EEEEEEcCCceEEEEEEEcC
Q 011558 59 FQIICRLPPGHHQYKFYVDG 78 (483)
Q Consensus 59 ~~~~~~l~~g~~~ykf~vdg 78 (483)
.++.+.|+.|.+..||..++
T Consensus 95 ~~~~v~L~aG~ntI~l~~~~ 114 (145)
T 2w3j_A 95 VNVDIPLKAGTNSIKLVAET 114 (145)
T ss_dssp EEEEEEECSEEEEEEEEECS
T ss_pred EEEEEEECCCceEEEEEEec
Confidence 35579999999999998754
No 189
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=25.79 E-value=44 Score=35.52 Aligned_cols=58 Identities=16% Similarity=0.091 Sum_probs=37.7
Q ss_pred CcceEEEEEecCCCceEEEEeccCCCCCCCCCCcCCCCCCeEEEEEEcCCceEEEEEEEcC
Q 011558 18 SILVPVRFIWPNGGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICRLPPGHHQYKFYVDG 78 (483)
Q Consensus 18 ~~~~~~~f~~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~l~~g~~~ykf~vdg 78 (483)
...+.++|.-+.+..+|.+...-..|.. +|....+...+|+++++ +.+.+.|+|.+++
T Consensus 131 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~Y~f~~~~ 188 (696)
T 4aee_A 131 NGEIIIRLIAPTEINEPLIDLGNEIREP--LTKHVVGDNIVYQYIIP-SRSILRYRFIFNY 188 (696)
T ss_dssp TTEEEEEEEEETTSCCCEEECSSCEECC--SEEEEETTEEEEEEEEE-CCSEEEEEEEEEE
T ss_pred CCEEEEEEEEcCCCCEEEEEcCCcceee--eeeeecCCceEEEEEEc-CCCeEEEEEEEEE
Confidence 3567788877667666777654444442 23332222348999999 7778999999953
No 190
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=25.60 E-value=99 Score=21.16 Aligned_cols=32 Identities=13% Similarity=0.116 Sum_probs=26.1
Q ss_pred eCCCCHHHHHHHHHcCCCCEEEEEeCCCCeEE
Q 011558 437 LRSDPLHKVMERLANPGVRRLVIVEAGSKRVE 468 (483)
Q Consensus 437 ~~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~ 468 (483)
-+-+|+.+|+.+|...+...+...|.++|++-
T Consensus 10 ~kpmsveEAv~qmel~gh~F~vF~n~~t~~~n 41 (57)
T 3k2t_A 10 LKPMDSEEAVLQMNLLGHSFYVYTDAETNGTN 41 (57)
T ss_dssp -CCBCHHHHHHHHHHHTCSEEEEEBSSSCCEE
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEEcCCCCCEE
Confidence 36789999999999999999988987666643
No 191
>1uy4_A Endo-1,4-beta-xylanase A; carbohydrate-binding module, thermodynamics, protein structure, protein-carbohydrate interactions; HET: XYP; 1.69A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1uy1_A* 1uy3_A* 1uy2_A*
Probab=25.06 E-value=38 Score=28.09 Aligned_cols=22 Identities=14% Similarity=0.080 Sum_probs=16.6
Q ss_pred EEEEEEcCCceEEEEEEEcCee
Q 011558 59 FQIICRLPPGHHQYKFYVDGEW 80 (483)
Q Consensus 59 ~~~~~~l~~g~~~ykf~vdg~w 80 (483)
.++.+.++.|.|...|...|.|
T Consensus 113 v~~~v~~~~G~h~lyl~f~g~~ 134 (145)
T 1uy4_A 113 VSTNISKITGVHDIVLVFSGPV 134 (145)
T ss_dssp EEEEEEEECSEEEEEEEESSCC
T ss_pred EEEEecCCCceEEEEEEEeCCe
Confidence 3445677889999999888853
No 192
>4gln_D D-RFX001; heterochiral protein-protein complex, D-protein antagonist, factor-inihibitor complex; HET: DTY DSG DTH DVA DPN DTR DGL DIL DAS; 1.60A {Synthetic} PDB: 4gls_D* 4gls_C*
Probab=25.06 E-value=28 Score=23.17 Aligned_cols=16 Identities=19% Similarity=0.626 Sum_probs=11.8
Q ss_pred EEEEc-CeeeeCCCCCe
Q 011558 73 KFYVD-GEWRHDENQPH 88 (483)
Q Consensus 73 kf~vd-g~w~~d~~~~~ 88 (483)
..-+| |+|.+|+.-.+
T Consensus 35 ~n~~d~geWtYddaTKT 51 (56)
T 4gln_D 35 SXFSDFDDWTYDDATKT 51 (56)
T ss_pred hcCCcCCeeEecCccee
Confidence 44567 99999986654
No 193
>2rpv_A Immunoglobulin G-binding protein G; lanthanide binding peptide, LBT, paramagnetic effect, olivia, cell WALL, IGG-binding protein; NMR {Streptococcus SP}
Probab=24.28 E-value=31 Score=24.30 Aligned_cols=13 Identities=46% Similarity=0.930 Sum_probs=9.8
Q ss_pred EcCeeeeCCCCCe
Q 011558 76 VDGEWRHDENQPH 88 (483)
Q Consensus 76 vdg~w~~d~~~~~ 88 (483)
|||+|.+|+.-.+
T Consensus 58 vdgeWsYD~ATkT 70 (75)
T 2rpv_A 58 VDGEWTYDDATKT 70 (75)
T ss_dssp CCSEEEEETTTTE
T ss_pred CCceEeecCceeE
Confidence 5888998886553
No 194
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=24.08 E-value=68 Score=33.65 Aligned_cols=52 Identities=21% Similarity=0.261 Sum_probs=37.0
Q ss_pred cceEEEEEecCC-CceEEEEeccCCCCCCCCCCcCCCCCC---eEEEEEEcCCceEEEEEEE
Q 011558 19 ILVPVRFIWPNG-GRRVSLSGSFTRWSEPMPMSPSEGCPA---VFQIICRLPPGHHQYKFYV 76 (483)
Q Consensus 19 ~~~~~~f~~~~~-~~~V~l~Gsf~~W~~~~~m~~~~~~~~---~~~~~~~l~~g~~~ykf~v 76 (483)
..+.++|.-+.+ ..+|.+.|. ..+||.+... ++ +|++.++.+.....|+|.|
T Consensus 123 ~~~~~r~~~~~~~~~~~~~~~~-----~~~~m~~~~~-~~~~d~w~~~v~~~~~~~~Y~f~i 178 (645)
T 4aef_A 123 GRVHVLLRTQKGVIKGATFLGE-----KHVPMRKKAS-DELFDYFEVIVEGGDKRLNYSFEV 178 (645)
T ss_dssp TEEEEEEEEETTTEEEEEEESS-----SEEECEEEEE-CSSEEEEEEEEECSCSCEEEEEEE
T ss_pred CeEEEEEEcccCCcceEEEeCC-----CEEEEEEEec-CCCeEEEEEEEECCCCceEEEEEE
Confidence 446666665544 577888764 3579987643 44 4888898888888999988
No 195
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=23.91 E-value=44 Score=27.44 Aligned_cols=19 Identities=16% Similarity=0.211 Sum_probs=15.4
Q ss_pred EEEEEcCCceEEEEEEEcC
Q 011558 60 QIICRLPPGHHQYKFYVDG 78 (483)
Q Consensus 60 ~~~~~l~~g~~~ykf~vdg 78 (483)
++.+.|++|.+..+|..++
T Consensus 98 ~~~v~L~aG~ntI~l~~~~ 116 (144)
T 2w47_A 98 GIVANLNQGNNVIRATAIA 116 (144)
T ss_dssp EEEEEECSEEEEEEEEECS
T ss_pred EEEEEECCCccEEEEEEeC
Confidence 3458999999999998654
No 196
>1uxx_X Xylanase U; carbohydrate binding module, CBM6, xylopentaose binding, xylan degradation; HET: XYP; 1.6A {Clostridium thermocellum} SCOP: b.18.1.10 PDB: 1gmm_A*
Probab=21.75 E-value=25 Score=28.69 Aligned_cols=20 Identities=15% Similarity=0.179 Sum_probs=15.6
Q ss_pred EEEEcCCceEEEEEEEcCee
Q 011558 61 IICRLPPGHHQYKFYVDGEW 80 (483)
Q Consensus 61 ~~~~l~~g~~~ykf~vdg~w 80 (483)
+.+.++.|.|..+|...|.|
T Consensus 100 ~~v~~~~G~h~l~l~f~G~~ 119 (133)
T 1uxx_X 100 CSITNTTGQHDLYLVFSGPV 119 (133)
T ss_dssp EEEEEECSEEEEEEEESSCC
T ss_pred EEEccCCcEEEEEEEEECCc
Confidence 44667889999999888854
No 197
>1uxz_A Cellulase B; carbohydrate binding module, CBM6, mixted BETA1, 3-1, 4 linked glucan; 1.4A {Cellvibrio mixtus} SCOP: b.18.1.10 PDB: 1uy0_A* 1uyx_A* 1uyy_A* 1uyz_A* 1uz0_A*
Probab=20.83 E-value=26 Score=28.46 Aligned_cols=18 Identities=28% Similarity=0.468 Sum_probs=14.3
Q ss_pred EEEEEcCCceEEEEEEEc
Q 011558 60 QIICRLPPGHHQYKFYVD 77 (483)
Q Consensus 60 ~~~~~l~~g~~~ykf~vd 77 (483)
+..+.|+.|.|..+|...
T Consensus 99 ~~~v~l~~G~h~l~l~~~ 116 (131)
T 1uxz_A 99 QHTVNLSAGSHQFGIKAN 116 (131)
T ss_dssp EEEEEECSEEECEEEEEE
T ss_pred EEEEEeCCCeEEEEEEEc
Confidence 345788999999888875
No 198
>1pgx_A Protein G; immunoglobulin binding protein; 1.66A {Streptococcus} SCOP: d.15.7.1
Probab=20.25 E-value=33 Score=24.69 Aligned_cols=13 Identities=38% Similarity=0.790 Sum_probs=10.2
Q ss_pred EcCeeeeCCCCCe
Q 011558 76 VDGEWRHDENQPH 88 (483)
Q Consensus 76 vdg~w~~d~~~~~ 88 (483)
|||+|.+|+.-.+
T Consensus 52 vdgeWsYD~ATkT 64 (83)
T 1pgx_A 52 VDGVWTYDDATKT 64 (83)
T ss_dssp CCEEEEEETTTTE
T ss_pred CCceEeeccccee
Confidence 5889999987664
No 199
>3lyv_A Ribosome-associated factor Y; ribosomal protein S30AE family, structural genomics, PSI-2, structure initiative; 2.70A {Streptococcus pyogenes}
Probab=20.22 E-value=1.7e+02 Score=20.72 Aligned_cols=31 Identities=3% Similarity=0.063 Sum_probs=25.8
Q ss_pred CCCCHHHHHHHHHcCCCCEEEEEeCCCCeEE
Q 011558 438 RSDPLHKVMERLANPGVRRLVIVEAGSKRVE 468 (483)
Q Consensus 438 ~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~ 468 (483)
+-+|+.+|+.+|...+...+...|.++|++-
T Consensus 12 kpMsveEAv~qMel~gh~F~vF~n~etg~~n 42 (66)
T 3lyv_A 12 KPMDVEEARLQMELLGHDFFIYTDSEDGATN 42 (66)
T ss_dssp CEECHHHHHHHHHTTTCSEEEEEETTTCSEE
T ss_pred CCCCHHHHHHHHHcCCCcEEEEEeCCCCCEE
Confidence 5578999999999999999988997666643
No 200
>3ka5_A Ribosome-associated protein Y (PSRP-1); structural genomics, PSI-2, protein structure initiative; 1.80A {Clostridium acetobutylicum}
Probab=20.11 E-value=1.6e+02 Score=20.73 Aligned_cols=31 Identities=13% Similarity=0.130 Sum_probs=25.5
Q ss_pred CCCCHHHHHHHHHcCCCCEEEEEeCCCCeEE
Q 011558 438 RSDPLHKVMERLANPGVRRLVIVEAGSKRVE 468 (483)
Q Consensus 438 ~~~tl~~~~~~m~~~~~~~l~VVd~~~~~l~ 468 (483)
+-+|+.+|+.+|...+...+...|.++|++-
T Consensus 11 kpMsveEAv~qmel~gh~F~vF~n~etg~~n 41 (65)
T 3ka5_A 11 KPMSEEEAVLEMELLGHNFFVFQNGDSNEVN 41 (65)
T ss_dssp SCBCHHHHHHHHHHHTCSEEEEEETTTTEEE
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEeCCCCCEE
Confidence 5688999999999999998888887666543
Done!