Query 011561
Match_columns 483
No_of_seqs 277 out of 2621
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 02:44:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011561.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011561hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK04201 zinc transporter ZupT 100.0 2.1E-37 4.5E-42 306.9 26.4 250 122-466 3-265 (265)
2 PRK04201 zinc transporter ZupT 100.0 1.3E-32 2.9E-37 272.6 21.1 203 1-205 42-264 (265)
3 PF02535 Zip: ZIP Zinc transpo 100.0 3.4E-31 7.4E-36 268.3 26.2 276 135-461 13-316 (317)
4 COG0428 Predicted divalent hea 100.0 5.9E-31 1.3E-35 260.0 25.0 245 122-466 6-265 (266)
5 COG0428 Predicted divalent hea 100.0 2.4E-29 5.2E-34 248.5 19.1 203 1-205 46-264 (266)
6 PF02535 Zip: ZIP Zinc transpo 100.0 2.1E-28 4.5E-33 247.9 17.4 197 1-201 44-316 (317)
7 PLN02159 Fe(2+) transport prot 99.9 2E-25 4.3E-30 226.8 20.1 200 1-204 87-336 (337)
8 PLN02159 Fe(2+) transport prot 99.9 7.6E-24 1.7E-28 215.3 27.8 135 327-463 184-335 (337)
9 TIGR00820 zip ZIP zinc/iron tr 99.9 1.6E-24 3.4E-29 220.4 22.4 135 327-463 171-322 (324)
10 TIGR00820 zip ZIP zinc/iron tr 99.9 2.7E-25 5.8E-30 226.0 16.7 200 1-204 59-323 (324)
11 KOG1558 Fe2+/Zn2+ regulated tr 99.9 5.9E-23 1.3E-27 207.0 25.7 138 324-463 173-325 (327)
12 KOG1558 Fe2+/Zn2+ regulated tr 99.9 9.4E-23 2E-27 205.5 18.0 200 1-204 59-326 (327)
13 KOG2694 Putative zinc transpor 99.8 8.7E-19 1.9E-23 166.1 21.5 236 151-462 102-357 (361)
14 KOG2693 Putative zinc transpor 99.8 3.7E-20 8E-25 193.5 10.7 141 321-461 297-449 (453)
15 KOG2694 Putative zinc transpor 99.8 1.4E-19 3.1E-24 171.5 12.9 202 1-204 112-359 (361)
16 KOG2693 Putative zinc transpor 99.7 7.4E-19 1.6E-23 183.7 5.1 141 61-203 302-451 (453)
17 KOG2474 Zinc transporter and r 99.5 1.4E-14 3E-19 145.6 7.2 130 325-454 243-390 (406)
18 KOG3907 ZIP-like zinc transpor 99.2 8.6E-14 1.9E-18 131.3 -7.7 176 26-203 105-299 (303)
19 KOG3907 ZIP-like zinc transpor 99.1 2.4E-12 5.2E-17 121.6 -4.6 131 330-460 144-296 (303)
20 KOG2474 Zinc transporter and r 98.9 3.2E-10 6.8E-15 114.5 2.2 142 60-204 243-403 (406)
21 KOG0569 Permease of the major 87.7 46 0.00099 36.2 23.4 119 322-442 264-403 (485)
22 PRK11469 hypothetical protein; 79.1 58 0.0013 30.7 15.6 23 326-348 106-128 (188)
23 PF04306 DUF456: Protein of un 71.8 75 0.0016 28.5 11.4 116 63-203 9-125 (140)
24 PF02659 DUF204: Domain of unk 58.4 76 0.0017 24.2 7.8 30 120-149 16-49 (67)
25 PF02673 BacA: Bacitracin resi 58.4 2E+02 0.0043 28.6 17.6 79 117-195 173-257 (259)
26 PF02673 BacA: Bacitracin resi 57.8 79 0.0017 31.4 9.7 77 380-456 173-258 (259)
27 PRK12554 undecaprenyl pyrophos 52.3 1.4E+02 0.003 30.1 10.4 79 381-459 180-267 (276)
28 PRK00281 undecaprenyl pyrophos 51.4 1.8E+02 0.0038 29.2 11.0 78 381-458 178-263 (268)
29 COG1968 BacA Undecaprenyl pyro 50.3 2.4E+02 0.0051 28.3 11.5 80 382-461 180-267 (270)
30 COG3859 Predicted membrane pro 45.9 1.4E+02 0.0031 27.7 8.4 70 408-481 74-143 (185)
31 COG1971 Predicted membrane pro 41.4 3.2E+02 0.0069 26.0 18.8 23 326-348 108-130 (190)
32 COG5336 Uncharacterized protei 37.9 94 0.002 26.8 5.6 33 135-167 54-91 (116)
33 PRK11469 hypothetical protein; 34.1 3.6E+02 0.0079 25.3 9.7 47 360-408 9-55 (188)
34 PF11700 ATG22: Vacuole efflux 32.1 6.8E+02 0.015 27.0 13.6 112 120-243 345-469 (477)
35 PRK13755 putative mercury tran 29.0 3.7E+02 0.0081 23.7 7.9 91 343-442 34-127 (139)
36 TIGR02840 spore_YtaF putative 28.1 5.3E+02 0.011 24.5 16.2 53 96-150 5-57 (206)
37 PRK12554 undecaprenyl pyrophos 26.7 6.6E+02 0.014 25.2 19.3 81 118-198 180-266 (276)
38 PRK00281 undecaprenyl pyrophos 25.7 6.8E+02 0.015 25.0 19.5 82 117-198 177-263 (268)
39 PF07444 Ycf66_N: Ycf66 protei 24.5 1.3E+02 0.0029 24.6 4.2 47 152-200 8-54 (84)
40 PF04306 DUF456: Protein of un 24.1 5.2E+02 0.011 23.1 12.7 113 328-460 9-122 (140)
41 PF06570 DUF1129: Protein of u 24.0 6.1E+02 0.013 23.9 10.3 8 421-428 119-126 (206)
42 PRK09757 PTS system N-acetylga 22.9 7.7E+02 0.017 24.6 12.9 46 412-460 173-219 (267)
43 TIGR03055 photo_alph_chp2 puta 22.5 3.5E+02 0.0075 26.7 7.4 59 111-169 13-71 (245)
44 PF03741 TerC: Integral membra 22.2 6.5E+02 0.014 23.5 10.9 66 97-178 16-82 (183)
45 COG5336 Uncharacterized protei 22.1 2.7E+02 0.0058 24.1 5.7 31 398-428 54-90 (116)
46 COG2431 Predicted membrane pro 22.0 7.9E+02 0.017 24.9 9.8 63 112-177 145-213 (297)
47 PF00873 ACR_tran: AcrB/AcrD/A 21.7 9.3E+02 0.02 28.7 12.4 102 336-442 306-415 (1021)
No 1
>PRK04201 zinc transporter ZupT; Provisional
Probab=100.00 E-value=2.1e-37 Score=306.90 Aligned_cols=250 Identities=26% Similarity=0.331 Sum_probs=207.0
Q ss_pred ChHHHHHHHHHHHhHHHHHHHHHHHhhhhchhhHHHHHHHhHHHHHHHHHHhhchhhhhcC--------CCCchhHHHHH
Q 011561 122 SPQNAMLWSIITSLPQPIVAVPSFICADAFNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEA--------SPTPVASAATI 193 (483)
Q Consensus 122 s~~~a~l~~~l~al~t~lGalig~~~~~~~~~~~~~lla~aaG~lLyv~~~eLlPea~~~~--------~~~~~~~~~~~ 193 (483)
+.++++++++++++++++|+++++++.+.++++++.+++|++|+|+|+++.|++||+.+.- .......++++
T Consensus 3 ~~~~a~~~~~l~~~~t~lGal~~~~~~~~~~~~l~~~lafAaGvml~~~~~~LiPea~~~~~~~~~~~~~~~~~~~~~~~ 82 (265)
T PRK04201 3 NVSVALLLTLLAGLATGIGSLIAFFGKKPNNRFLSFSLGFAAGVMLYVSFMEILPKALAALTEAYGEGMGPWLGYGAFFG 82 (265)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHH
Confidence 4577889999999999999999998877889999999999999999999999999999741 12235678889
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCccchhhhhhhhccchhhHHHHHHHhhhhccccccccccccccccccCCCChhhhhhc
Q 011561 194 SVAFMEALSTLFQNLSHDYNSQDASGYFVSLLFGLGPLLGGIVLLAFAHAFSLQHALLMGAASGIAFVLGGWRPVQLLLS 273 (483)
Q Consensus 194 G~~~m~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (483)
|+++|+++|+++++. ++|+++++++.
T Consensus 83 G~ll~~~ld~~~~~~-------------------------------------~~~~~~~~~~~----------------- 108 (265)
T PRK04201 83 GILGIFLIDRLVPHE-------------------------------------NPHELMQKEEM----------------- 108 (265)
T ss_pred HHHHHHHHHHhcccc-------------------------------------Ccccccccccc-----------------
Confidence 999999999876420 01111000000
Q ss_pred ccCCchhHHHHhhhccccccccchhhhhhhcccCCCCcCCCCccCCCCchhhHHHHHHHHHHHHhhhhhhHHhhhhcccc
Q 011561 274 SKMGFIPLVFLLAAGAAFVHVSSSSILKLAGRKKTSSVSLPTVNSFPVSVLTLQSFLSCGAVALHALAEGLALGVAAPKA 353 (483)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~al~lH~~~EGlaiG~s~~~~ 353 (483)
++ +..+.++..+.++++.+|+++||+|||+++|+++..+
T Consensus 109 --------------------------~~---------------~~~~~~~~~~~~~~~~~a~~lH~~~eGlalg~~~~~~ 147 (265)
T PRK04201 109 --------------------------EF---------------QQPLPKSLKRTGILTALAISIHNFPEGIATFVAALSN 147 (265)
T ss_pred --------------------------cc---------------cccchHHHHHHHHHHHHHHHHHhcchhhhhhhhhhcc
Confidence 00 0001123456789999999999999999999999999
Q ss_pred chhHHHHHHHHHhhhhHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhHHHHHHHHHh-h--cChhhHHHHHHHHHhhh-H
Q 011561 354 YGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAIGAILA-G--IDYSGLDHVMVFACGGL-L 429 (483)
Q Consensus 354 ~~~g~~l~~aI~lH~ipeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~plGa~ig~~~-~--~~~~~~~~lla~aaG~~-y 429 (483)
.+.|+.++++|.+||+|||++++.+++.++.+|||++++++++++++|+|+++|+.+ + .++...++++++++|+| |
T Consensus 148 ~~~g~~~~~aI~~H~iPeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~p~G~~~g~~~~~~~~~~~~~~~~l~~aaG~~ly 227 (265)
T PRK04201 148 PELGFPIALAIAIHNIPEGIAVAVPVYYATGSKKKAFLYSFLSGLAEPLGAVLGYLLLGPFISPVVMGAIFAAVAGIMVF 227 (265)
T ss_pred hhhHHHHHHHHHHhcCcHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999876 2 46778899999999999 9
Q ss_pred HhHHHHHhhhhcCC-chhHHHHHHHHHHHHHHHHHHHh
Q 011561 430 PSFGRIVKRAASLD-TRKGSCGLIFGVGFATLCLTCTK 466 (483)
Q Consensus 430 v~~~ellpe~~~~~-~~~~~~~~~~G~~l~~~~l~~~~ 466 (483)
|++.|++||+++++ ++.+.+++++|+.+|++.+..+|
T Consensus 228 v~~~el~pea~~~~~~~~~~~~~~~G~~~m~~~~~~~~ 265 (265)
T PRK04201 228 ISLDELLPAAKEYGPHHLPSYGLIAGMAVMALSLVLLQ 265 (265)
T ss_pred HHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999998874 46789999999999999887664
No 2
>PRK04201 zinc transporter ZupT; Provisional
Probab=100.00 E-value=1.3e-32 Score=272.62 Aligned_cols=203 Identities=23% Similarity=0.310 Sum_probs=174.9
Q ss_pred CcchhhHHHH-HHhhHhhHhh--------cchhHHHHHHHHHHHHHHHHHHHHhhhcccccccc-------cC-ch-hhH
Q 011561 1 MAAGVMLAAS-FDLIQEGQEH--------GASNWVVIGILSGGIFILLCKKFLEQYGEVSMLDI-------KG-AD-AAK 62 (483)
Q Consensus 1 FaaGvlL~~a-~~LlPea~~~--------~~~~~~~~gf~~G~~~~~~ld~~~~~~~~~~~~~~-------~~-~~-~~~ 62 (483)
||+|+|++++ +||+||++|. ..++....++++|+++++++|++.++.|.|+.++. ++ ++ .+.
T Consensus 42 fAaGvml~~~~~~LiPea~~~~~~~~~~~~~~~~~~~~~~~G~ll~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (265)
T PRK04201 42 FAAGVMLYVSFMEILPKALAALTEAYGEGMGPWLGYGAFFGGILGIFLIDRLVPHENPHELMQKEEMEFQQPLPKSLKRT 121 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHhccccCcccccccccccccccchHHHHHH
Confidence 6899999999 9999999974 13445778999999999999999975443221110 01 11 256
Q ss_pred HHHHHHHHhhhhcchhhhhhhhhcCCCcchhHHHHHHHHHHhhchhHHHHHHHHhhcCCChHHHHHHHHHHHhHHHHHHH
Q 011561 63 VVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQPIVAV 142 (483)
Q Consensus 63 ~~~l~~al~lH~~~eGlaiG~~~~~~~~~~~g~~l~~AI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~l~al~t~lGal 142 (483)
++++.+++++||+|||+++|+++..++.. ++.+++||++||+|||++++.++++++.+|||++++++++++++|+|++
T Consensus 122 ~~~~~~a~~lH~~~eGlalg~~~~~~~~~--g~~~~~aI~~H~iPeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~p~G~~ 199 (265)
T PRK04201 122 GILTALAISIHNFPEGIATFVAALSNPEL--GFPIALAIAIHNIPEGIAVAVPVYYATGSKKKAFLYSFLSGLAEPLGAV 199 (265)
T ss_pred HHHHHHHHHHHhcchhhhhhhhhhcchhh--HHHHHHHHHHhcCcHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999888776 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhh--hchhhHHHHHHHhHHHHHHHHHHhhchhhhhcCCCCchhHHHHHHHHHHHHHHHHH
Q 011561 143 PSFICAD--AFNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPTPVASAATISVAFMEALSTLF 205 (483)
Q Consensus 143 ig~~~~~--~~~~~~~~lla~aaG~lLyv~~~eLlPea~~~~~~~~~~~~~~~G~~~m~~l~~~~ 205 (483)
+|+++.+ .++.+++++++|++|+|+|+++.|++||+++.++++....++++|+.+|.+++..+
T Consensus 200 ~g~~~~~~~~~~~~~~~~l~~aaG~~lyv~~~el~pea~~~~~~~~~~~~~~~G~~~m~~~~~~~ 264 (265)
T PRK04201 200 LGYLLLGPFISPVVMGAIFAAVAGIMVFISLDELLPAAKEYGPHHLPSYGLIAGMAVMALSLVLL 264 (265)
T ss_pred HHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHh
Confidence 9998764 36778899999999999999999999999998777778999999999999987653
No 3
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=100.00 E-value=3.4e-31 Score=268.28 Aligned_cols=276 Identities=17% Similarity=0.191 Sum_probs=185.2
Q ss_pred hHHHHHHHHHHHhh-----hhchhhHHHHHHHhHHHHHHHHHHhhchhhhhcCCC-----------CchhHHHHHHHHHH
Q 011561 135 LPQPIVAVPSFICA-----DAFNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASP-----------TPVASAATISVAFM 198 (483)
Q Consensus 135 l~t~lGalig~~~~-----~~~~~~~~~lla~aaG~lLyv~~~eLlPea~~~~~~-----------~~~~~~~~~G~~~m 198 (483)
+.+.+|.++-+.+. +.+++++.++.+|++|+|+++++.+|+||+.+..+. ......+++|++++
T Consensus 13 ~~s~lg~~~P~~~~~~~~~~~~~~~l~~~~~fa~GvlL~~a~~hLLPea~~~~~~~~~~~~~~~~~~~~~~~~~~Gfl~~ 92 (317)
T PF02535_consen 13 IVSLLGGLLPLLIRKFSKNRLNKRILSLLNAFAAGVLLGTAFLHLLPEAIEALESSGCFGEFGHSYPLAFLIFLVGFLLF 92 (317)
T ss_pred HHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHcCchhhcccccccccccccchhhhHHHHHHHHHHHH
Confidence 34445555555543 346789999999999999999999999999976532 23667889999999
Q ss_pred HHHHHHHhhhcccCCCCCccchhhhhhhhccchhhHHHHHHHhhhhccccccccccccccccccCCCChhhhhhcccCCc
Q 011561 199 EALSTLFQNLSHDYNSQDASGYFVSLLFGLGPLLGGIVLLAFAHAFSLQHALLMGAASGIAFVLGGWRPVQLLLSSKMGF 278 (483)
Q Consensus 199 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (483)
+++|++++...+... .+.|.+.+++++.+..+ ..+.+.. ++
T Consensus 93 ~~ie~i~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~---~~~~~~~--~~--- 133 (317)
T PF02535_consen 93 FFIERILHSIFEHDH-------------------------------SHSHDHSHSHSSSELNS---DEPSNSV--SS--- 133 (317)
T ss_pred HHHHHHHHHHhhccc-------------------------------ccccccccccccccccc---ccccCcc--cc---
Confidence 999999876432100 01111111111000000 0000000 00
Q ss_pred hhHHHHhhhccccccccchhhhhhhcccCCCCcCCCCccCCCCchhhHHHHHHHHHHHHhhhhhhHHhhhhccccchhHH
Q 011561 279 IPLVFLLAAGAAFVHVSSSSILKLAGRKKTSSVSLPTVNSFPVSVLTLQSFLSCGAVALHALAEGLALGVAAPKAYGLGQ 358 (483)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~al~lH~~~EGlaiG~s~~~~~~~g~ 358 (483)
....+...++..++..+++.+.+.+...+.++..+..+.++++.+|+++||++||+++|++...+. ++
T Consensus 134 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Hs~~eGl~ig~~~~~~~--~~ 201 (317)
T PF02535_consen 134 ----------SEIEDDSNSEHSDQNSHHSHSSHSHSHHDDKSGVSQNIRALILLIALSIHSFFEGLAIGAAFSSDS--GW 201 (317)
T ss_pred ----------ccccCCcccccccccccccccccccccccccchhhhhHHHHHHHHHHHhhcchhhhhhhcchhhhh--HH
Confidence 000000000000000000001111111111111111245899999999999999999999765555 89
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhHHHHHHHHHh------hcChhhHHHHHHHHHhhh-HHh
Q 011561 359 HMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAIGAILA------GIDYSGLDHVMVFACGGL-LPS 431 (483)
Q Consensus 359 ~l~~aI~lH~ipeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~plGa~ig~~~------~~~~~~~~~lla~aaG~~-yv~ 431 (483)
.++++|.+||+|||++++.++++++.++++++++.+++++++|+|+++|+.+ ...+...++++++++|+| ||+
T Consensus 202 ~~~~ai~~Hk~~e~~~~~~~l~~~~~~~~~~~~~~~~~sl~~piG~~ig~~~~~~~~~~~~~~~~~~~~a~aaG~~lyv~ 281 (317)
T PF02535_consen 202 SLFIAIILHKIPEGFALGSILVKAGFSKRKALLLLLLFSLSTPIGALIGIAISNSGSSSSSDIVSGILLAFAAGTFLYVA 281 (317)
T ss_pred HHHHHHHHhHhHHHhhhhhhhhhhccccchhhHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999877 245567889999999999 999
Q ss_pred HHHHHhhhhcCCc-----hhHHHHHHHHHHHHHHH
Q 011561 432 FGRIVKRAASLDT-----RKGSCGLIFGVGFATLC 461 (483)
Q Consensus 432 ~~ellpe~~~~~~-----~~~~~~~~~G~~l~~~~ 461 (483)
+.|++||+.++++ ..+++++++|+++|++.
T Consensus 282 ~~ell~~~~~~~~~~~~~~~~~~~~~~G~~~~~~l 316 (317)
T PF02535_consen 282 FVELLPEEFHNKHSRKSRLLKFLGFLIGFLLMALL 316 (317)
T ss_pred HHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987743 56788999999998764
No 4
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]
Probab=99.98 E-value=5.9e-31 Score=260.00 Aligned_cols=245 Identities=25% Similarity=0.305 Sum_probs=200.2
Q ss_pred ChHHHHHHHHHHHhHHHHHHHHHHHh-hhhchhhHHHHHHHhHHHHHHHHHHhhchhhhhcCCCC--------chhHHHH
Q 011561 122 SPQNAMLWSIITSLPQPIVAVPSFIC-ADAFNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPT--------PVASAAT 192 (483)
Q Consensus 122 s~~~a~l~~~l~al~t~lGalig~~~-~~~~~~~~~~lla~aaG~lLyv~~~eLlPea~~~~~~~--------~~~~~~~ 192 (483)
+....+..++++++++.+|+...++. .+.++++....++|++|+|+|.++.+++|+..+..... ....+++
T Consensus 6 ~~l~~~~~~ll~~~~t~lG~~~~~~~~~~~~~~~~~~~~gFa~Gvm~~as~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 85 (266)
T COG0428 6 SLLFALLLGLLAGLATALGALLVVLAVRKVSPRVLDILLGFAAGVMLAASFTSLLPPAIEASGVLGDSTHEFLPALAGFL 85 (266)
T ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHhhcccchHHHHHHHhhhhhHHHHHHHHHhcchHHhhhccccccchhhHHHHHHHH
Confidence 34455677889999999999999883 56788999999999999999999999999988765432 3455666
Q ss_pred HHHHHHHHHHHHHhhhcccCCCCCccchhhhhhhhccchhhHHHHHHHhhhhccccccccccccccccccCCCChhhhhh
Q 011561 193 ISVAFMEALSTLFQNLSHDYNSQDASGYFVSLLFGLGPLLGGIVLLAFAHAFSLQHALLMGAASGIAFVLGGWRPVQLLL 272 (483)
Q Consensus 193 ~G~~~m~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 272 (483)
+|+.+++.+|++++ |+|..+..+
T Consensus 86 ~G~~~~~~~d~l~~-----------------------------------------h~h~~~~~~---------------- 108 (266)
T COG0428 86 LGVLFIFLLDRLVP-----------------------------------------HEHEGKSVE---------------- 108 (266)
T ss_pred HHHHHHHHHHHcCC-----------------------------------------ccCCCCCcc----------------
Confidence 66666666666433 333110000
Q ss_pred cccCCchhHHHHhhhccccccccchhhhhhhcccCCCCcCCCCccCCCCchhhHHHHHHHHHHHHhhhhhhHHhhhhccc
Q 011561 273 SSKMGFIPLVFLLAAGAAFVHVSSSSILKLAGRKKTSSVSLPTVNSFPVSVLTLQSFLSCGAVALHALAEGLALGVAAPK 352 (483)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~al~lH~~~EGlaiG~s~~~ 352 (483)
.+ + +.+++..+.++++++++++||||||+++|+++..
T Consensus 109 ---------------------------~~--~--------------~~~~~~~~~~~l~~lai~iHnfpEGlai~va~~~ 145 (266)
T COG0428 109 ---------------------------GL--E--------------GLRKPNLRRGFLLALAISLHNFPEGLAIGVAFLS 145 (266)
T ss_pred ---------------------------cc--c--------------cccCcchhHHHHHHHHHHHhccchhHHHHHHHhc
Confidence 00 0 0011114678999999999999999999999999
Q ss_pred cchhHHHHHHHHHhhhhHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhHHHHHHHHHh-hcCh-hhHHHHHHHHHhhh-H
Q 011561 353 AYGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAIGAILA-GIDY-SGLDHVMVFACGGL-L 429 (483)
Q Consensus 353 ~~~~g~~l~~aI~lH~ipeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~plGa~ig~~~-~~~~-~~~~~lla~aaG~~-y 429 (483)
+...|+.+++||.+||+|||++++.|++.++.||+|.+.++.+.++.+|+|+++|+.. .... ..+++++++++|.| |
T Consensus 146 ~~~~gi~~alaI~ihnipEG~av~~pL~~~~~s~~~~l~~~~lsg~~~~lgavig~~~~~~~~~~~l~~~la~aaG~mv~ 225 (266)
T COG0428 146 NPSLGIALALAIAIHNIPEGLAVALPLAGAGRSRLKALLVAVLSGLAEPLGAVIGAYLLGISSPLVLPFALAFAAGAMVY 225 (266)
T ss_pred cchHHHHHHHHHHHhccccHHHHHHHHHhcCCchHHHHHHHHHHHhHHHHHHHHHHHHHhhchHHHHHHHHHHHhhcchh
Confidence 9999999999999999999999999999999999999999999999999999999765 4444 88999999999999 9
Q ss_pred HhHHHHHhhhhcCC---chhHHHHHHHHHHHHHHHHHHHh
Q 011561 430 PSFGRIVKRAASLD---TRKGSCGLIFGVGFATLCLTCTK 466 (483)
Q Consensus 430 v~~~ellpe~~~~~---~~~~~~~~~~G~~l~~~~l~~~~ 466 (483)
++..|++||+++++ ++..++++.+|+++|++++..+.
T Consensus 226 v~~~eliPea~~~~~~~~~~~~~~~~~G~~~~~~l~~~l~ 265 (266)
T COG0428 226 VVVDELLPEAKRHGGGSEKLATAGLFAGFLVMAVLDVLLG 265 (266)
T ss_pred hhHHHHhhHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999962 36789999999999999988764
No 5
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]
Probab=99.97 E-value=2.4e-29 Score=248.52 Aligned_cols=203 Identities=33% Similarity=0.509 Sum_probs=177.3
Q ss_pred CcchhhHHHH-HHhhHhhHhhcc--------hhHHHHHHHHHHHHHHHHHHHHhhhccccc-ccc---cCchhhHHHHHH
Q 011561 1 MAAGVMLAAS-FDLIQEGQEHGA--------SNWVVIGILSGGIFILLCKKFLEQYGEVSM-LDI---KGADAAKVVLVI 67 (483)
Q Consensus 1 FaaGvlL~~a-~~LlPea~~~~~--------~~~~~~gf~~G~~~~~~ld~~~~~~~~~~~-~~~---~~~~~~~~~~l~ 67 (483)
|++|+|+.++ ++++|++.+... ......+|++|.++++.+|+++++.|..+. ++. +++..+++++++
T Consensus 46 Fa~Gvm~~as~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~d~l~~h~h~~~~~~~~~~~~~~~~~~~~l~~ 125 (266)
T COG0428 46 FAAGVMLAASFTSLLPPAIEASGVLGDSTHEFLPALAGFLLGVLFIFLLDRLVPHEHEGKSVEGLEGLRKPNLRRGFLLA 125 (266)
T ss_pred hhhhHHHHHHHHHhcchHHhhhccccccchhhHHHHHHHHHHHHHHHHHHHcCCccCCCCCccccccccCcchhHHHHHH
Confidence 7899999999 999999998642 223778899999999999999986543211 111 122257799999
Q ss_pred HHHhhhhcchhhhhhhhhcCCCcchhHHHHHHHHHHhhchhHHHHHHHHhhcCCChHHHHHHHHHHHhHHHHHHHHHHHh
Q 011561 68 GIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQPIVAVPSFIC 147 (483)
Q Consensus 68 ~al~lH~~~eGlaiG~~~~~~~~~~~g~~l~~AI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~l~al~t~lGalig~~~ 147 (483)
+++++||||||+++|+++..++.. |+.+++||.+||+|||++++.+++.++.+|+|++.++.++++..++|+++|++.
T Consensus 126 lai~iHnfpEGlai~va~~~~~~~--gi~~alaI~ihnipEG~av~~pL~~~~~s~~~~l~~~~lsg~~~~lgavig~~~ 203 (266)
T COG0428 126 LAISLHNFPEGLAIGVAFLSNPSL--GIALALAIAIHNIPEGLAVALPLAGAGRSRLKALLVAVLSGLAEPLGAVIGAYL 203 (266)
T ss_pred HHHHHhccchhHHHHHHHhccchH--HHHHHHHHHHhccccHHHHHHHHHhcCCchHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 999999999999999999999876 999999999999999999999999999999999999999999999999999988
Q ss_pred hhhch-hhHHHHHHHhHHHHHHHHHHhhchhhhhc--CCCCchhHHHHHHHHHHHHHHHHH
Q 011561 148 ADAFN-KFLPFCTGFAAGCMIWMVIAEVLPDAFKE--ASPTPVASAATISVAFMEALSTLF 205 (483)
Q Consensus 148 ~~~~~-~~~~~lla~aaG~lLyv~~~eLlPea~~~--~~~~~~~~~~~~G~~~m~~l~~~~ 205 (483)
...+. .++++++++++|.|+|+++.|++||+.++ .+....+.++.+|+++|+.+|..+
T Consensus 204 ~~~~~~~~l~~~la~aaG~mv~v~~~eliPea~~~~~~~~~~~~~~~~~G~~~~~~l~~~l 264 (266)
T COG0428 204 LGISSPLVLPFALAFAAGAMVYVVVDELLPEAKRHGGGSEKLATAGLFAGFLVMAVLDVLL 264 (266)
T ss_pred HhhchHHHHHHHHHHHhhcchhhhHHHHhhHHHhcCCCchHHHHHHHHHHHHHHHHHHHhh
Confidence 77666 89999999999999999999999999995 355668999999999999999865
No 6
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=99.96 E-value=2.1e-28 Score=247.91 Aligned_cols=197 Identities=25% Similarity=0.415 Sum_probs=166.7
Q ss_pred CcchhhHHHH-HHhhHhhHhhc-----------chhHHHHHHHHHHHHHHHHHHHHhhhccc------cc----------
Q 011561 1 MAAGVMLAAS-FDLIQEGQEHG-----------ASNWVVIGILSGGIFILLCKKFLEQYGEV------SM---------- 52 (483)
Q Consensus 1 FaaGvlL~~a-~~LlPea~~~~-----------~~~~~~~gf~~G~~~~~~ld~~~~~~~~~------~~---------- 52 (483)
|++|+||+++ +||+||+++.. .+++....+++|+++++++|++.++..++ .+
T Consensus 44 fa~GvlL~~a~~hLLPea~~~~~~~~~~~~~~~~~~~~~~~~~~Gfl~~~~ie~i~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (317)
T PF02535_consen 44 FAAGVLLGTAFLHLLPEAIEALESSGCFGEFGHSYPLAFLIFLVGFLLFFFIERILHSIFEHDHSHSHDHSHSHSSSELN 123 (317)
T ss_pred HHHHHHHHHHHHHcCchhhcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccc
Confidence 6899999999 99999999753 13678999999999999999999543100 00
Q ss_pred -------cc-------------c-----c------C-----ch-h--hHHHHHHHHHhhhhcchhhhhhhhhcCCCcchh
Q 011561 53 -------LD-------------I-----K------G-----AD-A--AKVVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQ 93 (483)
Q Consensus 53 -------~~-------------~-----~------~-----~~-~--~~~~~l~~al~lH~~~eGlaiG~~~~~~~~~~~ 93 (483)
++ . + . +. . +++|++.+++++||++||+++|+++..+.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Hs~~eGl~ig~~~~~~~---- 199 (317)
T PF02535_consen 124 SDEPSNSVSSSEIEDDSNSEHSDQNSHHSHSSHSHSHHDDKSGVSQNIRALILLIALSIHSFFEGLAIGAAFSSDS---- 199 (317)
T ss_pred cccccCccccccccCCcccccccccccccccccccccccccchhhhhHHHHHHHHHHHhhcchhhhhhhcchhhhh----
Confidence 00 0 0 0 00 1 24899999999999999999999986654
Q ss_pred HHHHHHHHHHhhchhHHHHHHHHhhcCCChHHHHHHHHHHHhHHHHHHHHHHHh-----hhhchhhHHHHHHHhHHHHHH
Q 011561 94 GLLVTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQPIVAVPSFIC-----ADAFNKFLPFCTGFAAGCMIW 168 (483)
Q Consensus 94 g~~l~~AI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~l~al~t~lGalig~~~-----~~~~~~~~~~lla~aaG~lLy 168 (483)
++.+++||++||+||+++++.++++++.++|+++.+.+++++++|+|+++|+++ ...++...++++++++|+|+|
T Consensus 200 ~~~~~~ai~~Hk~~e~~~~~~~l~~~~~~~~~~~~~~~~~sl~~piG~~ig~~~~~~~~~~~~~~~~~~~~a~aaG~~ly 279 (317)
T PF02535_consen 200 GWSLFIAIILHKIPEGFALGSILVKAGFSKRKALLLLLLFSLSTPIGALIGIAISNSGSSSSSDIVSGILLAFAAGTFLY 279 (317)
T ss_pred HHHHHHHHHHhHhHHHhhhhhhhhhhccccchhhHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999999999999 445678899999999999999
Q ss_pred HHHHhhchhhhhcCCC----CchhHHHHHHHHHHHHH
Q 011561 169 MVIAEVLPDAFKEASP----TPVASAATISVAFMEAL 201 (483)
Q Consensus 169 v~~~eLlPea~~~~~~----~~~~~~~~~G~~~m~~l 201 (483)
+++.|++||..++.+. ....+++++|+.+|.++
T Consensus 280 v~~~ell~~~~~~~~~~~~~~~~~~~~~~G~~~~~~l 316 (317)
T PF02535_consen 280 VAFVELLPEEFHNKHSRKSRLLKFLGFLIGFLLMALL 316 (317)
T ss_pred HHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998873 45788999999999876
No 7
>PLN02159 Fe(2+) transport protein
Probab=99.94 E-value=2e-25 Score=226.84 Aligned_cols=200 Identities=14% Similarity=0.159 Sum_probs=158.1
Q ss_pred CcchhhHHHH-HHhhHhhHhhc-----------chhHHHHHHHHHHHHHHHHHHHHhhh------------ccccccc--
Q 011561 1 MAAGVMLAAS-FDLIQEGQEHG-----------ASNWVVIGILSGGIFILLCKKFLEQY------------GEVSMLD-- 54 (483)
Q Consensus 1 FaaGvlL~~a-~~LlPea~~~~-----------~~~~~~~gf~~G~~~~~~ld~~~~~~------------~~~~~~~-- 54 (483)
|++||+|+++ +||+||+.|.- ++|+....+.+|+++++++|++..+. |.|.+.+
T Consensus 87 FagGV~Lat~flHLLp~a~e~l~~~cl~~~~~~~yP~~~~i~~~g~~l~~liE~~~~~~~~~~~~~~~~~~h~h~~~~~~ 166 (337)
T PLN02159 87 FASGIILGTGFMHVLPDSFEMLSSKCLEDNPWHKFPFAGFVAMLSGLVTLAIDSMATSLYTSKNSVGPMPDHGHSHGHGV 166 (337)
T ss_pred HhhhHhHHHHHHHhhhHHHHhhhchhhcCCCcccCchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccccCccccccc
Confidence 7999999999 99999999641 35677888888999999999886531 1111100
Q ss_pred ----c-cC--chh---hHHHHHHHHHhhhhcchhhhhhhhhcCCCcchhHHHHHHHHHHhhchhHHHHHHHHhhcCCChH
Q 011561 55 ----I-KG--ADA---AKVVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMMLASKGVSPQ 124 (483)
Q Consensus 55 ----~-~~--~~~---~~~~~l~~al~lH~~~eGlaiG~~~~~~~~~~~g~~l~~AI~lH~ipeg~a~~~~L~~~g~s~~ 124 (483)
. ++ +.. ...+++.+|+++||++||+++|+++..+. -..+.+||.+||+|||++++.++.+++.+++
T Consensus 167 ~~~~~~~~~~~~~r~~~~a~~l~~gl~lHS~~eGlalG~~~~~~~----~~~l~~AI~~Hk~~eg~aLg~~L~~~~~~~~ 242 (337)
T PLN02159 167 VLKTKDDGNAQLLRYRVIAMVLELGIIVHSVVIGLSLGATNDTCT----IKGLIAALCFHQMFEGMGLGGCILQAEYTNV 242 (337)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHHHHHhchhhhcCCCchh----HHHHHHHHHHHhhHHHHHHHHHHHhccCcHH
Confidence 0 11 111 23588999999999999999999875443 2346779999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhhhc-------hhhHHHHHHHhHHHHHHHHHHhhchhhhhcCCC-------CchhHH
Q 011561 125 NAMLWSIITSLPQPIVAVPSFICADAF-------NKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASP-------TPVASA 190 (483)
Q Consensus 125 ~a~l~~~l~al~t~lGalig~~~~~~~-------~~~~~~lla~aaG~lLyv~~~eLlPea~~~~~~-------~~~~~~ 190 (483)
+.+.+.+++++++|+|..+|+.+.+.. ..+.+++.++++|+|+|+++.|++|+.+...+. ....++
T Consensus 243 ~~~~~~~~fal~tPiG~~iG~~v~~~~~~~~~~~~~~~gil~a~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~~~ 322 (337)
T PLN02159 243 KKFLMAFFFAVTTPFGIFLGIALSSIYRDNSPTALITVGLLNACSAGLLIYMALVDLLAAEFMGPKLQGSIKLQIKCFFA 322 (337)
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHH
Confidence 999999999999999999999875531 146799999999999999999999987644321 134568
Q ss_pred HHHHHHHHHHHHHH
Q 011561 191 ATISVAFMEALSTL 204 (483)
Q Consensus 191 ~~~G~~~m~~l~~~ 204 (483)
+++|+.+|.++.++
T Consensus 323 l~~G~~~Mall~~w 336 (337)
T PLN02159 323 ALLGCGGMSIVAKW 336 (337)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998764
No 8
>PLN02159 Fe(2+) transport protein
Probab=99.93 E-value=7.6e-24 Score=215.26 Aligned_cols=135 Identities=14% Similarity=0.158 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHhhhhhhHHhhhhccccchhHHHHHHHHHhhhhHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhHHHHHH
Q 011561 327 QSFLSCGAVALHALAEGLALGVAAPKAYGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAIG 406 (483)
Q Consensus 327 ~~~~~~~al~lH~~~EGlaiG~s~~~~~~~g~~l~~aI~lH~ipeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~plGa~i 406 (483)
..+++.+|+++||++||+++|++...+... .+.++|.+||+|||++++.++.+++.++++.+.+.+++++++|+|+++
T Consensus 184 ~a~~l~~gl~lHS~~eGlalG~~~~~~~~~--~l~~AI~~Hk~~eg~aLg~~L~~~~~~~~~~~~~~~~fal~tPiG~~i 261 (337)
T PLN02159 184 IAMVLELGIIVHSVVIGLSLGATNDTCTIK--GLIAALCFHQMFEGMGLGGCILQAEYTNVKKFLMAFFFAVTTPFGIFL 261 (337)
T ss_pred HHHHHHHHHHHHHHHhchhhhcCCCchhHH--HHHHHHHHHhhHHHHHHHHHHHhccCcHHHHHHHHHHHHHhcHHHHHH
Confidence 458999999999999999999966544444 467799999999999999999999999999999999999999999999
Q ss_pred HHHh-hc----Ch---hhHHHHHHHHHhhh-HHhHHHHHhhhhcCCc--------hhHHHHHHHHHHHHHHHHH
Q 011561 407 AILA-GI----DY---SGLDHVMVFACGGL-LPSFGRIVKRAASLDT--------RKGSCGLIFGVGFATLCLT 463 (483)
Q Consensus 407 g~~~-~~----~~---~~~~~lla~aaG~~-yv~~~ellpe~~~~~~--------~~~~~~~~~G~~l~~~~l~ 463 (483)
|+.+ +. ++ ...++++++++|+| ||++.|++|++...++ .+.++++++|+.+|++...
T Consensus 262 G~~v~~~~~~~~~~~~~~~gil~a~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~~~l~~G~~~Mall~~ 335 (337)
T PLN02159 262 GIALSSIYRDNSPTALITVGLLNACSAGLLIYMALVDLLAAEFMGPKLQGSIKLQIKCFFAALLGCGGMSIVAK 335 (337)
T ss_pred HHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9866 21 11 35689999999999 9999999997643221 2345688999999987653
No 9
>TIGR00820 zip ZIP zinc/iron transport family. transport has not been characterized, but these systems probably function as secondary carriers.
Probab=99.93 E-value=1.6e-24 Score=220.41 Aligned_cols=135 Identities=13% Similarity=0.136 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHhhhhhhHHhhhhccccchhHHHHHHHHHhhhhHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhHHHHHH
Q 011561 327 QSFLSCGAVALHALAEGLALGVAAPKAYGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAIG 406 (483)
Q Consensus 327 ~~~~~~~al~lH~~~EGlaiG~s~~~~~~~g~~l~~aI~lH~ipeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~plGa~i 406 (483)
..+++.+|+++||++||+++|++. +....+.+++||.+||+|||++++.++.+++.++++.+.+.+++++++|+|+++
T Consensus 171 ~~~~l~~gl~~Hs~~eGlalG~~~--~~~~~~~l~~Ai~~Hk~~eg~alg~~l~~~~~~~~~~~~~~~~fsl~tPiG~~i 248 (324)
T TIGR00820 171 VAQVLELGIIVHSVVIGLSLGASQ--SPDTIKPLIAALSFHQFFEGLGLGGCISQAEFKCKSVTIMCTFFAVTTPLGIAI 248 (324)
T ss_pred HHHHHHHHHHhcchhhhhhhhhcc--CcchHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhHHHHHH
Confidence 478899999999999999999964 444568899999999999999999999999999999999999999999999999
Q ss_pred HHHhh-----cCh---hhHHHHHHHHHhhh-HHhHHHHHhhhhcCC------c--hhHHHHHHHHHHHHHHHHH
Q 011561 407 AILAG-----IDY---SGLDHVMVFACGGL-LPSFGRIVKRAASLD------T--RKGSCGLIFGVGFATLCLT 463 (483)
Q Consensus 407 g~~~~-----~~~---~~~~~lla~aaG~~-yv~~~ellpe~~~~~------~--~~~~~~~~~G~~l~~~~l~ 463 (483)
|+.+. .++ ...++++++++|+| ||++.|++|++...+ + ..+++++++|+.+|++...
T Consensus 249 G~~~~~~~~~~~~~~~~~~gil~~~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~~~~~~G~~~Ma~l~~ 322 (324)
T TIGR00820 249 GMGISSSYDDSSPTALIVEGVLNAASAGILIYMALVDLLAADFMHPKMQSNLRLQIMAYIALLLGAGLMSLLAK 322 (324)
T ss_pred HHHHhcccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98662 122 35689999999999 999999999764332 1 2467789999999987654
No 10
>TIGR00820 zip ZIP zinc/iron transport family. transport has not been characterized, but these systems probably function as secondary carriers.
Probab=99.93 E-value=2.7e-25 Score=226.04 Aligned_cols=200 Identities=17% Similarity=0.173 Sum_probs=159.5
Q ss_pred CcchhhHHHH-HHhhHhhHhhc-----------chhHHHHHHHHHHHHHHHHHHHHhhhc--c--c-----ccc------
Q 011561 1 MAAGVMLAAS-FDLIQEGQEHG-----------ASNWVVIGILSGGIFILLCKKFLEQYG--E--V-----SML------ 53 (483)
Q Consensus 1 FaaGvlL~~a-~~LlPea~~~~-----------~~~~~~~gf~~G~~~~~~ld~~~~~~~--~--~-----~~~------ 53 (483)
||+||+|+++ +||+||++|.- ++|+....+.+|+++++++|++..++. + + ++.
T Consensus 59 FagGVfLATafvHLLp~a~e~l~~~cl~~~~~~~yP~~~~i~~~g~~l~~~iE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (324)
T TIGR00820 59 FAAGVILATGFMHVLPEAFEMLSSPCLESTPWGKFPFAGFIAMISAILTLLVDLFATSYYERKHGKGDHGSKEIKVGDGE 138 (324)
T ss_pred hccceeeeeeeeeeccHHHHhhcCcccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCcccccccccc
Confidence 7999999999 99999999841 356788888999999999998765331 1 0 000
Q ss_pred --c----c----c------C----ch-hh---HHHHHHHHHhhhhcchhhhhhhhhcCCCcchhHHHHHHHHHHhhchhH
Q 011561 54 --D----I----K------G----AD-AA---KVVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVHNIPEG 109 (483)
Q Consensus 54 --~----~----~------~----~~-~~---~~~~l~~al~lH~~~eGlaiG~~~~~~~~~~~g~~l~~AI~lH~ipeg 109 (483)
+ . + + .. .| ..+++.+|+++||++||+++|++...+ . .+.+++||++||+|||
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gl~~Hs~~eGlalG~~~~~~--~--~~~l~~Ai~~Hk~~eg 214 (324)
T TIGR00820 139 EGTAGGTKHGHEYYEDHVHTNSEVVQLLRQRVVAQVLELGIIVHSVVIGLSLGASQSPD--T--IKPLIAALSFHQFFEG 214 (324)
T ss_pred cCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHHHHhcchhhhhhhhhccCcc--h--HHHHHHHHHHHHHHHH
Confidence 0 0 0 0 00 12 267888999999999999999997433 2 6789999999999999
Q ss_pred HHHHHHHhhcCCChHHHHHHHHHHHhHHHHHHHHHHHhhhh----ch---hhHHHHHHHhHHHHHHHHHHhhchhhhhcC
Q 011561 110 LAVSMMLASKGVSPQNAMLWSIITSLPQPIVAVPSFICADA----FN---KFLPFCTGFAAGCMIWMVIAEVLPDAFKEA 182 (483)
Q Consensus 110 ~a~~~~L~~~g~s~~~a~l~~~l~al~t~lGalig~~~~~~----~~---~~~~~lla~aaG~lLyv~~~eLlPea~~~~ 182 (483)
++++.++.+++.++++.+.+++++++++|+|+.+|+.+.+. ++ .+.++++++++|+|+|+++.|++|+.....
T Consensus 215 ~alg~~l~~~~~~~~~~~~~~~~fsl~tPiG~~iG~~~~~~~~~~~~~~~~~~gil~~~aaG~flYv~~~Ell~~e~~~~ 294 (324)
T TIGR00820 215 LGLGGCISQAEFKCKSVTIMCTFFAVTTPLGIAIGMGISSSYDDSSPTALIVEGVLNAASAGILIYMALVDLLAADFMHP 294 (324)
T ss_pred HHHHHHHhccCCCchHHHHHHHHHHHhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999987642 12 367999999999999999999999876543
Q ss_pred CC-------CchhHHHHHHHHHHHHHHHH
Q 011561 183 SP-------TPVASAATISVAFMEALSTL 204 (483)
Q Consensus 183 ~~-------~~~~~~~~~G~~~m~~l~~~ 204 (483)
+. ..+.+++++|+.+|.++.++
T Consensus 295 ~~~~~~~~~~~~~~~~~~G~~~Ma~l~~w 323 (324)
T TIGR00820 295 KMQSNLRLQIMAYIALLLGAGLMSLLAKW 323 (324)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 21 13567899999999998764
No 11
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism]
Probab=99.92 E-value=5.9e-23 Score=206.97 Aligned_cols=138 Identities=19% Similarity=0.241 Sum_probs=121.3
Q ss_pred hhHHHHHHHHHHHHhhhhhhHHhhhhccccchhHHHHHHHHHhhhhHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhHHH
Q 011561 324 LTLQSFLSCGAVALHALAEGLALGVAAPKAYGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTS 403 (483)
Q Consensus 324 ~~~~~~~~~~al~lH~~~EGlaiG~s~~~~~~~g~~l~~aI~lH~ipeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~plG 403 (483)
.....+.+.+|+++||++||+++|+ +.+...-+.+..|+.+||+.|||+++..+.+++.++++.+.+++.+++.+|+|
T Consensus 173 ~~~~~~iL~lgi~~HSvfeGlalGv--~~~~~ti~~L~~al~fHk~fegf~lG~~l~~a~~~~~~~~~~~~~fslttPiG 250 (327)
T KOG1558|consen 173 SRLRSLILELGLSFHSVFEGLALGV--QDSVSTIWTLFLALSFHKLFEGFGLGGCLLQAGFTFKSAVLMALFFSLTTPIG 250 (327)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhccc--cCCHHHHHHHHHHHHHHHHHHHhcccHHHhhcccchHHHHHHHHHHHHHhHHH
Confidence 3566788999999999999999999 56667779999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcC-------hhhHHHHHHHHHhhh-HHhHHHHHhhhhcCCc-------hhHHHHHHHHHHHHHHHHH
Q 011561 404 AIGAILAGID-------YSGLDHVMVFACGGL-LPSFGRIVKRAASLDT-------RKGSCGLIFGVGFATLCLT 463 (483)
Q Consensus 404 a~ig~~~~~~-------~~~~~~lla~aaG~~-yv~~~ellpe~~~~~~-------~~~~~~~~~G~~l~~~~l~ 463 (483)
..+|..+..+ .-..+++.++++|++ |+++.|++|+++.+++ ..+++++++|+++|.+...
T Consensus 251 i~iG~~i~~~~~~s~~~~i~~gvL~alAaGtliY~~lvElla~ef~~~~~~~~~~~i~~~i~~~~G~alms~l~~ 325 (327)
T KOG1558|consen 251 IALGIGISSSYENSPGALITSGVLEALAAGTLIYVALVELLAAEFANPKMQSLKLQILKLIALLLGFALMSLLAI 325 (327)
T ss_pred HHHHHHhcccccCCchhHHHHHHHHHHhhhHhHHHHHHHHhHHHhcCchhhhHHHHHHHHHHHHHhHHHHHHHHH
Confidence 9999877322 224679999999999 9999999998876643 5679999999999987654
No 12
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism]
Probab=99.90 E-value=9.4e-23 Score=205.47 Aligned_cols=200 Identities=22% Similarity=0.243 Sum_probs=164.9
Q ss_pred CcchhhHHHH-HHhhHhhHhhc-----------chhHHHHHHHHHHHHHHHHHHHHhhhccccc-------------cc-
Q 011561 1 MAAGVMLAAS-FDLIQEGQEHG-----------ASNWVVIGILSGGIFILLCKKFLEQYGEVSM-------------LD- 54 (483)
Q Consensus 1 FaaGvlL~~a-~~LlPea~~~~-----------~~~~~~~gf~~G~~~~~~ld~~~~~~~~~~~-------------~~- 54 (483)
|++||+|+++ +||+||+.|.- .+|+......+|+++++++|.+...+.+|++ .+
T Consensus 59 Fa~GViLaT~FlH~Lpd~~E~l~~~~~~~~~~~~fp~~~~i~~~gf~l~l~id~~~~~~~~h~~~~~~~~~~~~~~~~~~ 138 (327)
T KOG1558|consen 59 FAGGVILATGFLHLLPDAFEALESLCLADNPWGKFPFAEFIAMLGFFLTLLIDEITTSYVGHGHSHKKRNEVAVSEEGED 138 (327)
T ss_pred HhccHHHHHHHHHhChhHHHHhhcccccCCCCcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCcCcCcc
Confidence 7999999999 99999999851 3667888888999999999998864311100 00
Q ss_pred -------cc-----Cc------------------hhhHHHHHHHHHhhhhcchhhhhhhhhcCCCcchhHHHHHHHHHHh
Q 011561 55 -------IK-----GA------------------DAAKVVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVH 104 (483)
Q Consensus 55 -------~~-----~~------------------~~~~~~~l~~al~lH~~~eGlaiG~~~~~~~~~~~g~~l~~AI~lH 104 (483)
.+ ++ ...+.+.+.+|+++|+++||+++|++...+ . -+.++.|+.+|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~lgi~~HSvfeGlalGv~~~~~--t--i~~L~~al~fH 214 (327)
T KOG1558|consen 139 LRAVGNGEHGAIHVGHSHGHSEPSTPGVVDDGQASRLRSLILELGLSFHSVFEGLALGVQDSVS--T--IWTLFLALSFH 214 (327)
T ss_pred cccccccCCccccCCCCCCCCCCCCccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccCCHH--H--HHHHHHHHHHH
Confidence 00 00 124567889999999999999999986433 2 78999999999
Q ss_pred hchhHHHHHHHHhhcCCChHHHHHHHHHHHhHHHHHHHHHHHhhhh------chhhHHHHHHHhHHHHHHHHHHhhchhh
Q 011561 105 NIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQPIVAVPSFICADA------FNKFLPFCTGFAAGCMIWMVIAEVLPDA 178 (483)
Q Consensus 105 ~ipeg~a~~~~L~~~g~s~~~a~l~~~l~al~t~lGalig~~~~~~------~~~~~~~lla~aaG~lLyv~~~eLlPea 178 (483)
|..|+++++..+.+++.++|.++.+++++++.+|+|..+|..+.+. .....+++.++++|+++|+++.|++|..
T Consensus 215 k~fegf~lG~~l~~a~~~~~~~~~~~~~fslttPiGi~iG~~i~~~~~~s~~~~i~~gvL~alAaGtliY~~lvElla~e 294 (327)
T KOG1558|consen 215 KLFEGFGLGGCLLQAGFTFKSAVLMALFFSLTTPIGIALGIGISSSYENSPGALITSGVLEALAAGTLIYVALVELLAAE 294 (327)
T ss_pred HHHHHhcccHHHhhcccchHHHHHHHHHHHHHhHHHHHHHHHhcccccCCchhHHHHHHHHHHhhhHhHHHHHHHHhHHH
Confidence 9999999999999999999999999999999999999999988652 3457899999999999999999999998
Q ss_pred hhcCCC------CchhHHHHHHHHHHHHHHHH
Q 011561 179 FKEASP------TPVASAATISVAFMEALSTL 204 (483)
Q Consensus 179 ~~~~~~------~~~~~~~~~G~~~m~~l~~~ 204 (483)
+...+. ...+++.++|+++|..+..+
T Consensus 295 f~~~~~~~~~~~i~~~i~~~~G~alms~l~~w 326 (327)
T KOG1558|consen 295 FANPKMQSLKLQILKLIALLLGFALMSLLAIW 326 (327)
T ss_pred hcCchhhhHHHHHHHHHHHHHhHHHHHHHHHh
Confidence 876552 34688999999999998764
No 13
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=99.83 E-value=8.7e-19 Score=166.14 Aligned_cols=236 Identities=16% Similarity=0.150 Sum_probs=176.0
Q ss_pred chhhHHHHHHHhHHHHHHHHHHhhchhhhhcCCCC--------chhHHHHHHHHHHHHHHHHHhhhcccCCCCCccchhh
Q 011561 151 FNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPT--------PVASAATISVAFMEALSTLFQNLSHDYNSQDASGYFV 222 (483)
Q Consensus 151 ~~~~~~~lla~aaG~lLyv~~~eLlPea~~~~~~~--------~~~~~~~~G~~~m~~l~~~~~~~~~~~~~~~~~~~~~ 222 (483)
.++.+..+++|+.|.++..++.+++||+.+..+.. ...++++.|++.+.++++++-.- ++|+
T Consensus 102 g~~rL~~LLsFAiGgLLgdVFLHLLPEAwe~~n~~p~~e~sl~siGLwVlaGiLtF~~ieK~f~ss----~EE~------ 171 (361)
T KOG2694|consen 102 GQRRLNLLLSFAIGGLLGDVFLHLLPEAWESNNQDPSSENSLSSIGLWVLAGILTFSLIEKLFASS----EEEQ------ 171 (361)
T ss_pred hHHHHHHHHHHHHhhHHHHHHHHhCHHHHhccCCCCCCCCchhhhhHHHHHHHHHHHHHHHHHhcc----hhhc------
Confidence 46778999999999999999999999999876331 24789999999999999987331 1111
Q ss_pred hhhhhccchhhHHHHHHHhhhhccccccccccccccccccCCCChhhhhhcccCCchhHHHHhhhccccccccc--hhhh
Q 011561 223 SLLFGLGPLLGGIVLLAFAHAFSLQHALLMGAASGIAFVLGGWRPVQLLLSSKMGFIPLVFLLAAGAAFVHVSS--SSIL 300 (483)
Q Consensus 223 ~~~~~~~~~~~g~~l~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 300 (483)
|....+.+ + ...+|... -..+ ++++
T Consensus 172 -------------------------~~q~p~~~-----------~----------------~~ac~~~~-g~~c~~r~~~ 198 (361)
T KOG2694|consen 172 -------------------------HKQSPSAH-----------F----------------LNACGGAC-GKVCFLREQE 198 (361)
T ss_pred -------------------------cccCCCcc-----------h----------------hhHhhhcc-ccceecchhh
Confidence 10000000 0 00000000 0000 1111
Q ss_pred hhhcccCCCCcCCCCccCCCCchhhHHHHHHHHHHHHhhhhhhHHhhhhccccchhHHHHHHHHHhhhhHHHHHHHHHHH
Q 011561 301 KLAGRKKTSSVSLPTVNSFPVSVLTLQSFLSCGAVALHALAEGLALGVAAPKAYGLGQHMVLPVSLHGLPRGAAVASCIY 380 (483)
Q Consensus 301 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~al~lH~~~EGlaiG~s~~~~~~~g~~l~~aI~lH~ipeg~a~~~~l~ 380 (483)
+. +.+..+++..-.+|+..++-.++||..|+|++.||..+.+.|+..+++|.+|+||+..++++.+.
T Consensus 199 q~-------------~~~~~~q~~kvagYLNLlAN~iDNFtHGLAVa~SFLVS~k~GiltT~aILLHEIPHEvgDFAILL 265 (361)
T KOG2694|consen 199 QK-------------SKERKEQPKKVAGYLNLLANIIDNFTHGLAVASSFLVSTKFGILTTIAILLHEIPHEVGDFAILL 265 (361)
T ss_pred cc-------------cccccccchhHHHHHHHHHHhhhhhhhhhHHhhhhhhhhhhhHHHHHHHHHhhccchhhhhHHHH
Confidence 11 11111233445789999999999999999999999999999999999999999999999999999
Q ss_pred hcCCchHHHHHHHHHHhhhhHHHHHHHHHh--hc---ChhhHHHHHHHHHhhh-HHhHHHHHhhhhcCC-c---hhHHHH
Q 011561 381 GATASLPASLAAAALIGFMGPTSAIGAILA--GI---DYSGLDHVMVFACGGL-LPSFGRIVKRAASLD-T---RKGSCG 450 (483)
Q Consensus 381 ~~~~s~~~~~~~~~~~~l~~plGa~ig~~~--~~---~~~~~~~lla~aaG~~-yv~~~ellpe~~~~~-~---~~~~~~ 450 (483)
++|.+||.+....+..+....+|+.+++-. +. .+.-.++++.|.+|+| ||+..+++|+..++. + .++++.
T Consensus 266 RagF~rw~Aa~aQL~TA~~GlLGalvAi~g~~g~~pa~E~~tsw~lPFTaGGFL~IALv~vLPdll~Ee~p~eslkQLl~ 345 (361)
T KOG2694|consen 266 RAGFGRWNAALAQLTTAAFGLLGALVAIHGHTGNVPAIETRTSWLLPFTAGGFLNIALVEVLPDLLAEESPVESLKQLLM 345 (361)
T ss_pred HhccchhHHHHHHHHHHHHHHhhhHHHhhcCcCCchhhhhhcceeeeeccCceeehhHHHhhhHhhhccCHHHHHHHHHH
Confidence 999999999999999999999999888743 22 2445679999999999 999999999887663 3 468899
Q ss_pred HHHHHHHHHHHH
Q 011561 451 LIFGVGFATLCL 462 (483)
Q Consensus 451 ~~~G~~l~~~~l 462 (483)
++.|+++|.+.-
T Consensus 346 lv~Gi~~M~~~s 357 (361)
T KOG2694|consen 346 LVTGILTMSFLS 357 (361)
T ss_pred HHHHHHHHHHHH
Confidence 999999988763
No 14
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=99.82 E-value=3.7e-20 Score=193.46 Aligned_cols=141 Identities=16% Similarity=0.216 Sum_probs=125.8
Q ss_pred CchhhHHHHHHHHHHHHhhhhhhHHhhhhccccchhHHHHHHHHHhhhhHHHHHHHHHHHhcCCchHHHHHHHHHHhhhh
Q 011561 321 VSVLTLQSFLSCGAVALHALAEGLALGVAAPKAYGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMG 400 (483)
Q Consensus 321 ~~~~~~~~~~~~~al~lH~~~EGlaiG~s~~~~~~~g~~l~~aI~lH~ipeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~ 400 (483)
.......+|++.+|.++|||.||+|||++|..+...|+++.+|+.+|++|+.+++++.|+++|.+++++++++++.++.+
T Consensus 297 ~~~l~~~aymil~gD~~HNFtDGLAiGAaF~~s~~~G~sTsiAVlcHElPHELGDFAILl~sG~s~kqAl~lnllsal~a 376 (453)
T KOG2693|consen 297 VEELKKVAYMILAGDGLHNFTDGLAIGAAFTSSLLHGISTSLAVLCHEFPHELGDFAILLRSGLSVKQALLLNLLSALTA 376 (453)
T ss_pred ccchhhHhHHHHhccccccchhhhhhccccccccchhHHHHHHHHHHhccHHHHHHHHHHHcCCcHHHHHHHHHHhHHHH
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhc--ChhhHHHHHHHHHhhh-HHhHHHHHhhhhcCCc-----h----hHHHHHHHHHHHHHHH
Q 011561 401 PTSAIGAILAGI--DYSGLDHVMVFACGGL-LPSFGRIVKRAASLDT-----R----KGSCGLIFGVGFATLC 461 (483)
Q Consensus 401 plGa~ig~~~~~--~~~~~~~lla~aaG~~-yv~~~ellpe~~~~~~-----~----~~~~~~~~G~~l~~~~ 461 (483)
.+|..+|+.++. .++...+++++++|.| ||+..+++||..+.++ + .+..+++.||.+|++.
T Consensus 377 ~~G~~ig~~~~~~~~~~~~~~I~a~taG~FlYIAl~~m~Pem~~~~~~~~~~~~~~~lq~~gil~G~~~ml~i 449 (453)
T KOG2693|consen 377 FAGLAIGLVLGAGDEEELSSWILAFTAGMFLYIALVDVLPEMLESKNSVKKRKFCFALQIFGILAGFTIMLLI 449 (453)
T ss_pred HhhhheeEEecCCCccchHHHHHHHhcCcEEEEEehhhchhhhhccccchhHHHHHHHHHHHHHhhhHHHhhh
Confidence 999999988744 4788889999999999 9999999998876532 2 2466777777777654
No 15
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=99.81 E-value=1.4e-19 Score=171.47 Aligned_cols=202 Identities=24% Similarity=0.271 Sum_probs=164.9
Q ss_pred CcchhhHHHH-HHhhHhhHhhc------c--hhHHHHHHHHHHHHHHHHHHHHhhhc--cccc--c-c------------
Q 011561 1 MAAGVMLAAS-FDLIQEGQEHG------A--SNWVVIGILSGGIFILLCKKFLEQYG--EVSM--L-D------------ 54 (483)
Q Consensus 1 FaaGvlL~~a-~~LlPea~~~~------~--~~~~~~gf~~G~~~~~~ld~~~~~~~--~~~~--~-~------------ 54 (483)
||.|=+|+.+ +||+||++|.. . ..-.+++.+.|++.+.++|++....+ +|+. . +
T Consensus 112 FAiGgLLgdVFLHLLPEAwe~~n~~p~~e~sl~siGLwVlaGiLtF~~ieK~f~ss~EE~~~q~p~~~~~~ac~~~~g~~ 191 (361)
T KOG2694|consen 112 FAIGGLLGDVFLHLLPEAWESNNQDPSSENSLSSIGLWVLAGILTFSLIEKLFASSEEEQHKQSPSAHFLNACGGACGKV 191 (361)
T ss_pred HHHhhHHHHHHHHhCHHHHhccCCCCCCCCchhhhhHHHHHHHHHHHHHHHHHhcchhhccccCCCcchhhHhhhccccc
Confidence 6789999999 99999999853 1 11257889999999999999983321 1110 0 0
Q ss_pred -------c------cCchhhHHHHHHHHHhhhhcchhhhhhhhhcCCCcchhHHHHHHHHHHhhchhHHHHHHHHhhcCC
Q 011561 55 -------I------KGADAAKVVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMMLASKGV 121 (483)
Q Consensus 55 -------~------~~~~~~~~~~l~~al~lH~~~eGlaiG~~~~~~~~~~~g~~l~~AI~lH~ipeg~a~~~~L~~~g~ 121 (483)
. +.+....+|+.+++-.++||..|++++.+|..+... |+..+++|.+|++|.++++++.++++|.
T Consensus 192 c~~r~~~q~~~~~~~q~~kvagYLNLlAN~iDNFtHGLAVa~SFLVS~k~--GiltT~aILLHEIPHEvgDFAILLRagF 269 (361)
T KOG2694|consen 192 CFLREQEQKSKERKEQPKKVAGYLNLLANIIDNFTHGLAVASSFLVSTKF--GILTTIAILLHEIPHEVGDFAILLRAGF 269 (361)
T ss_pred eecchhhcccccccccchhHHHHHHHHHHhhhhhhhhhHHhhhhhhhhhh--hHHHHHHHHHhhccchhhhhHHHHHhcc
Confidence 0 001123489999999999999999999999999877 9999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhHHHHHHHHHHHhhh----hchhhHHHHHHHhHHHHHHHHHHhhchhhhhcCCCC---chhHHHHHH
Q 011561 122 SPQNAMLWSIITSLPQPIVAVPSFICAD----AFNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPT---PVASAATIS 194 (483)
Q Consensus 122 s~~~a~l~~~l~al~t~lGalig~~~~~----~~~~~~~~lla~aaG~lLyv~~~eLlPea~~~~~~~---~~~~~~~~G 194 (483)
+||.+....+.++..-.+|++++.-... ..+....+++.|.+|-|+|+++.+++|+..++.+++ ++.+.++.|
T Consensus 270 ~rw~Aa~aQL~TA~~GlLGalvAi~g~~g~~pa~E~~tsw~lPFTaGGFL~IALv~vLPdll~Ee~p~eslkQLl~lv~G 349 (361)
T KOG2694|consen 270 GRWNAALAQLTTAAFGLLGALVAIHGHTGNVPAIETRTSWLLPFTAGGFLNIALVEVLPDLLAEESPVESLKQLLMLVTG 349 (361)
T ss_pred chhHHHHHHHHHHHHHHhhhHHHhhcCcCCchhhhhhcceeeeeccCceeehhHHHhhhHhhhccCHHHHHHHHHHHHHH
Confidence 9999999998888888899988864221 235566789999999999999999999999877664 478899999
Q ss_pred HHHHHHHHHH
Q 011561 195 VAFMEALSTL 204 (483)
Q Consensus 195 ~~~m~~l~~~ 204 (483)
++.|.++...
T Consensus 350 i~~M~~~sl~ 359 (361)
T KOG2694|consen 350 ILTMSFLSLS 359 (361)
T ss_pred HHHHHHHHHh
Confidence 9999988654
No 16
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=99.74 E-value=7.4e-19 Score=183.72 Aligned_cols=141 Identities=18% Similarity=0.348 Sum_probs=129.4
Q ss_pred hHHHHHHHHHhhhhcchhhhhhhhhcCCCcchhHHHHHHHHHHhhchhHHHHHHHHhhcCCChHHHHHHHHHHHhHHHHH
Q 011561 61 AKVVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQPIV 140 (483)
Q Consensus 61 ~~~~~l~~al~lH~~~eGlaiG~~~~~~~~~~~g~~l~~AI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~l~al~t~lG 140 (483)
..+|++++++++|||.||+|||++|..+... |+++++|+..||+|.++++.+.|+++|.++++++++++++++.+.+|
T Consensus 302 ~~aymil~gD~~HNFtDGLAiGAaF~~s~~~--G~sTsiAVlcHElPHELGDFAILl~sG~s~kqAl~lnllsal~a~~G 379 (453)
T KOG2693|consen 302 KVAYMILAGDGLHNFTDGLAIGAAFTSSLLH--GISTSLAVLCHEFPHELGDFAILLRSGLSVKQALLLNLLSALTAFAG 379 (453)
T ss_pred hHhHHHHhccccccchhhhhhccccccccch--hHHHHHHHHHHhccHHHHHHHHHHHcCCcHHHHHHHHHHhHHHHHhh
Confidence 4689999999999999999999999998766 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhh-chhhHHHHHHHhHHHHHHHHHHhhchhhhhcCCCC--------chhHHHHHHHHHHHHHHH
Q 011561 141 AVPSFICADA-FNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPT--------PVASAATISVAFMEALST 203 (483)
Q Consensus 141 alig~~~~~~-~~~~~~~lla~aaG~lLyv~~~eLlPea~~~~~~~--------~~~~~~~~G~~~m~~l~~ 203 (483)
..+|..+.+. .+....++++++||.|+|++..+++||..+..+.. .+.++++.|+.+|+++..
T Consensus 380 ~~ig~~~~~~~~~~~~~~I~a~taG~FlYIAl~~m~Pem~~~~~~~~~~~~~~~lq~~gil~G~~~ml~ia~ 451 (453)
T KOG2693|consen 380 LAIGLVLGAGDEEELSSWILAFTAGMFLYIALVDVLPEMLESKNSVKKRKFCFALQIFGILAGFTIMLLIAL 451 (453)
T ss_pred hheeEEecCCCccchHHHHHHHhcCcEEEEEehhhchhhhhccccchhHHHHHHHHHHHHHhhhHHHhhhhc
Confidence 9999988765 57778899999999999999999999999877653 257899999999998865
No 17
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism]
Probab=99.52 E-value=1.4e-14 Score=145.63 Aligned_cols=130 Identities=22% Similarity=0.260 Sum_probs=94.9
Q ss_pred hHHHHHHHHHHHHhhhhhhH-Hhhhhccc-------cchhHH--HHHHHHH---hhhhHHHHHHHHHHHhcCCchHHHHH
Q 011561 325 TLQSFLSCGAVALHALAEGL-ALGVAAPK-------AYGLGQ--HMVLPVS---LHGLPRGAAVASCIYGATASLPASLA 391 (483)
Q Consensus 325 ~~~~~~~~~al~lH~~~EGl-aiG~s~~~-------~~~~g~--~l~~aI~---lH~ipeg~a~~~~l~~~~~s~~~~~~ 391 (483)
++.-......+..||.|||+ +|++++.. .-..-. ..++||. +||+|||++++.|+..++.+||++++
T Consensus 243 w~~i~l~~~~~~~h~~P~g~~~I~va~~~alst~pE~Fe~~~ns~~a~Gf~v~li~nf~Eglavslpl~~a~~Sr~~afl 322 (406)
T KOG2474|consen 243 WRRIHLLTLSITVHNHPEGLIGIQVALGAALSTFPEGFESFYNSSLAIGFGVFLIHNFVEGLAVSLPLAGAGFSRLKAFL 322 (406)
T ss_pred hHHHhhhcchhhcccCcchhhHHHHHHHhhhhcCcHHHHHHhccccccchhHHHHhcccccceeeeehhhhhhHHHHHHH
Confidence 33344566777888888887 66665421 000011 1445555 99999999999999999999999988
Q ss_pred HHHHH-hhhhHHHHHHHHHhhcCh--hhHHHHHHHHHhhh-HHhHHHHHhhhhcCCc-hhHHHHHHHH
Q 011561 392 AAALI-GFMGPTSAIGAILAGIDY--SGLDHVMVFACGGL-LPSFGRIVKRAASLDT-RKGSCGLIFG 454 (483)
Q Consensus 392 ~~~~~-~l~~plGa~ig~~~~~~~--~~~~~lla~aaG~~-yv~~~ellpe~~~~~~-~~~~~~~~~G 454 (483)
+..+. +...|+|.++++.+-.+. ...++++++++|.| |+...+++||+.++++ +....+.++|
T Consensus 323 ~~a~~g~~s~~lGll~a~~v~la~~igl~~~~~a~aaG~ml~~~~~~~i~~a~~~~~~~~~s~~~i~~ 390 (406)
T KOG2474|consen 323 YGAVLGGVSPPLGLLIAFAVFLAEPIGLLPYALAFAAGAMLYVVLDDIIPEAQRSDNSKLASLGTICG 390 (406)
T ss_pred HHHHhhcchhhHHHHHHHHHHhcCccchhhHHHHHhccceEEEEeccccccccccccccccccccchh
Confidence 76655 677899999998763333 35899999999999 9999999999988854 4444445555
No 18
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.24 E-value=8.6e-14 Score=131.27 Aligned_cols=176 Identities=16% Similarity=0.240 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccc-CchhhHHHHHHHHHhhhhcchhhhhhhhhcCCCcchhHHHHHHHHHHh
Q 011561 26 VVIGILSGGIFILLCKKFLEQYGEVSMLDIK-GADAAKVVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVH 104 (483)
Q Consensus 26 ~~~gf~~G~~~~~~ld~~~~~~~~~~~~~~~-~~~~~~~~~l~~al~lH~~~eGlaiG~~~~~~~~~~~g~~l~~AI~lH 104 (483)
.+....+|+.+|+++||.-... .|...+.+ +++...-....+|+.+|..-||+++|++...+.. +.-+.+++||.+|
T Consensus 105 IG~slVLgfv~mLlVdqi~tv~-~h~~v~~~a~rs~in~~t~tlgLvVHaaaDGVALGaaattn~~-svqiIVfvAImlH 182 (303)
T KOG3907|consen 105 IGFSLVLGFVFMLLVDQIGTVY-VHSNVKFQAGRSIINHITVTLGLVVHAAADGVALGAAATTNND-SVQIIVFVAIMLH 182 (303)
T ss_pred eeHHHHHHHHHHHhhhccccEE-EecccchhhhhhccccceeEEEEEEeeccccceecccccccCC-cEEEeehhHHHHh
Confidence 4566788999999999875332 11111000 1111111446789999999999999976655432 2267889999999
Q ss_pred hchhHHHHHHHHhhcCCChHHHHHHHHHHHhHHHHHHHHHHHhhhh------chhhHHHHHHHhHHHHHHHHHHhhchhh
Q 011561 105 NIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQPIVAVPSFICADA------FNKFLPFCTGFAAGCMIWMVIAEVLPDA 178 (483)
Q Consensus 105 ~ipeg~a~~~~L~~~g~s~~~a~l~~~l~al~t~lGalig~~~~~~------~~~~~~~lla~aaG~lLyv~~~eLlPea 178 (483)
|.|..+++...|+..+..||++..--+++++++|+|.++-++.... ++..++.++-|++|+|+|+++.+.+||.
T Consensus 183 KaPAafgLvSfll~e~l~r~~Irkhl~lFa~saPl~~ivt~lli~q~s~~m~~~satGvlmLfSaGtfLYvatvhvlpe~ 262 (303)
T KOG3907|consen 183 KAPAAFGLVSFLLHENLDRWEIRKHLVLFALSAPLGYIVTYLLILQHSKTMLSESATGVLMLFSAGTFLYVATVHVLPEL 262 (303)
T ss_pred cccHHHHHHHHHHHhhhHHHHHhhheEEEeccCcHHHHHHHHhhhccChhhhhhhhcceeeeecCCeeEEEEEEEEcccc
Confidence 9999999999999999999999988888999999999999875421 2345688999999999999999999997
Q ss_pred hhcCCC------------CchhHHHHHHHHHHHHHHH
Q 011561 179 FKEASP------------TPVASAATISVAFMEALST 203 (483)
Q Consensus 179 ~~~~~~------------~~~~~~~~~G~~~m~~l~~ 203 (483)
-+.... ..-.+.+++|..+-.++..
T Consensus 263 ~~~dh~l~vea~~g~~l~~~E~v~li~G~~iPlIis~ 299 (303)
T KOG3907|consen 263 SHTDHSLSVEATGGAVLPHDELVYLIIGALIPLIISY 299 (303)
T ss_pred CCCCcccccccccccccchhHHHHHHHhHHHHHHHHh
Confidence 763221 1235677778777766654
No 19
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.11 E-value=2.4e-12 Score=121.62 Aligned_cols=131 Identities=19% Similarity=0.215 Sum_probs=106.2
Q ss_pred HHHHHHHHhhhhhhHHhhhhcc-ccchhHHHHHHHHHhhhhHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhHHHHHHHH
Q 011561 330 LSCGAVALHALAEGLALGVAAP-KAYGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAIGAI 408 (483)
Q Consensus 330 ~~~~al~lH~~~EGlaiG~s~~-~~~~~g~~l~~aI~lH~ipeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~plGa~ig~ 408 (483)
...+|+.+|..-||+|+|++.. .+..+-+.+++||++||.|..|++...+...+..||++..-.++|++++|+|..+-|
T Consensus 144 t~tlgLvVHaaaDGVALGaaattn~~svqiIVfvAImlHKaPAafgLvSfll~e~l~r~~Irkhl~lFa~saPl~~ivt~ 223 (303)
T KOG3907|consen 144 TVTLGLVVHAAADGVALGAAATTNNDSVQIIVFVAIMLHKAPAAFGLVSFLLHENLDRWEIRKHLVLFALSAPLGYIVTY 223 (303)
T ss_pred eeEEEEEEeeccccceecccccccCCcEEEeehhHHHHhcccHHHHHHHHHHHhhhHHHHHhhheEEEeccCcHHHHHHH
Confidence 4568999999999999997654 346666889999999999999999999999999999999999999999999999988
Q ss_pred Hh--hc-----ChhhHHHHHHHHHhhh-HHhHHHHHhhhhcCC-------------chhHHHHHHHHHHHHHH
Q 011561 409 LA--GI-----DYSGLDHVMVFACGGL-LPSFGRIVKRAASLD-------------TRKGSCGLIFGVGFATL 460 (483)
Q Consensus 409 ~~--~~-----~~~~~~~lla~aaG~~-yv~~~ellpe~~~~~-------------~~~~~~~~~~G~~l~~~ 460 (483)
+. .. ++..++.+|-|++|+| |+++.+.+||....+ ++.-...+++|..+=.+
T Consensus 224 lli~q~s~~m~~~satGvlmLfSaGtfLYvatvhvlpe~~~~dh~l~vea~~g~~l~~~E~v~li~G~~iPlI 296 (303)
T KOG3907|consen 224 LLILQHSKTMLSESATGVLMLFSAGTFLYVATVHVLPELSHTDHSLSVEATGGAVLPHDELVYLIIGALIPLI 296 (303)
T ss_pred HhhhccChhhhhhhhcceeeeecCCeeEEEEEEEEccccCCCCcccccccccccccchhHHHHHHHhHHHHHH
Confidence 65 22 2334578999999999 999999999875421 12335566777655443
No 20
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism]
Probab=98.93 E-value=3.2e-10 Score=114.55 Aligned_cols=142 Identities=27% Similarity=0.426 Sum_probs=106.5
Q ss_pred hhHHHHHHHHHhhhhcchhh-hhhhhhcC----CC---------cchhHHHHHHHHHHhhchhHHHHHHHHhhcCCChHH
Q 011561 60 AAKVVLVIGIMTLHSFGEGS-GVGVSFAG----SK---------GFSQGLLVTLAIAVHNIPEGLAVSMMLASKGVSPQN 125 (483)
Q Consensus 60 ~~~~~~l~~al~lH~~~eGl-aiG~~~~~----~~---------~~~~g~~l~~AI~lH~ipeg~a~~~~L~~~g~s~~~ 125 (483)
|++--.....+..||.|||+ +|++++.. .+ +.+.|+.+.+ +||+|||++++.++..++.+|||
T Consensus 243 w~~i~l~~~~~~~h~~P~g~~~I~va~~~alst~pE~Fe~~~ns~~a~Gf~v~l---i~nf~Eglavslpl~~a~~Sr~~ 319 (406)
T KOG2474|consen 243 WRRIHLLTLSITVHNHPEGLIGIQVALGAALSTFPEGFESFYNSSLAIGFGVFL---IHNFVEGLAVSLPLAGAGFSRLK 319 (406)
T ss_pred hHHHhhhcchhhcccCcchhhHHHHHHHhhhhcCcHHHHHHhccccccchhHHH---HhcccccceeeeehhhhhhHHHH
Confidence 34445566788999999998 77776543 11 1112333222 99999999999999999999999
Q ss_pred HHHHHHHH-HhHHHHHHHHHHHhhhh-chhhHHHHHHHhHHHHHHHHHHhhchhhhhcCCCCchhHHHHHH---HHHHHH
Q 011561 126 AMLWSIIT-SLPQPIVAVPSFICADA-FNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPTPVASAATIS---VAFMEA 200 (483)
Q Consensus 126 a~l~~~l~-al~t~lGalig~~~~~~-~~~~~~~lla~aaG~lLyv~~~eLlPea~~~~~~~~~~~~~~~G---~~~m~~ 200 (483)
++++..+. ++.-|+|.++++.+... ....+++++++++|+|+|+.+.+++||+..+++.+..-.+..+| ++++..
T Consensus 320 afl~~a~~g~~s~~lGll~a~~v~la~~igl~~~~~a~aaG~ml~~~~~~~i~~a~~~~~~~~~s~~~i~~~~~~~v~l~ 399 (406)
T KOG2474|consen 320 AFLYGAVLGGVSPPLGLLIAFAVFLAEPIGLLPYALAFAAGAMLYVVLDDIIPEAQRSDNSKLASLGTICGKWCFLVTLI 399 (406)
T ss_pred HHHHHHHhhcchhhHHHHHHHHHHhcCccchhhHHHHHhccceEEEEeccccccccccccccccccccchhhhhHHHHHH
Confidence 99876555 56778888888876432 22358999999999999999999999999888776655555555 778877
Q ss_pred HHHH
Q 011561 201 LSTL 204 (483)
Q Consensus 201 l~~~ 204 (483)
+|..
T Consensus 400 l~~~ 403 (406)
T KOG2474|consen 400 LDVA 403 (406)
T ss_pred HHHh
Confidence 7753
No 21
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=87.74 E-value=46 Score=36.22 Aligned_cols=119 Identities=10% Similarity=-0.096 Sum_probs=58.7
Q ss_pred chhhHHHHHHHHHHHHhhhhhhHHhhhhcc--------ccchhHHHHHHHHHhhhhHHHHHHHHHHHhcCCchHHHHHHH
Q 011561 322 SVLTLQSFLSCGAVALHALAEGLALGVAAP--------KAYGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAA 393 (483)
Q Consensus 322 ~~~~~~~~~~~~al~lH~~~EGlaiG~s~~--------~~~~~g~~l~~aI~lH~ipeg~a~~~~l~~~~~s~~~~~~~~ 393 (483)
++..|.+..+.+.+.+=.-+.|+..=..+. -+.........++.+=|++-.+.-... -.+..||..++..
T Consensus 264 ~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~l--id~~gRRpLll~~ 341 (485)
T KOG0569|consen 264 NPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFL--IDRLGRRPLLLIS 341 (485)
T ss_pred CcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHhcCCcHHHHHH
Confidence 344556655666566555666665322111 123333456667777777766633333 3344455554444
Q ss_pred HHHhhhhHHHHHHHHHh-hcChhhHH---------HH--HHHHHhhh-HHhHHHHHhhhhcC
Q 011561 394 ALIGFMGPTSAIGAILA-GIDYSGLD---------HV--MVFACGGL-LPSFGRIVKRAASL 442 (483)
Q Consensus 394 ~~~~l~~plGa~ig~~~-~~~~~~~~---------~l--la~aaG~~-yv~~~ellpe~~~~ 442 (483)
.......-+-..+...+ +....+.. +. .++.-|-+ |....|+.|...|.
T Consensus 342 ~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~ 403 (485)
T KOG0569|consen 342 LSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARS 403 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchH
Confidence 43333333333333322 22212111 22 33334677 88999999876654
No 22
>PRK11469 hypothetical protein; Provisional
Probab=79.06 E-value=58 Score=30.71 Aligned_cols=23 Identities=26% Similarity=0.277 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHhhhhhhHHhhh
Q 011561 326 LQSFLSCGAVALHALAEGLALGV 348 (483)
Q Consensus 326 ~~~~~~~~al~lH~~~EGlaiG~ 348 (483)
+..+++.++.+++++.-|+..+.
T Consensus 106 ~~~l~LaiAtSiDAlavGi~~~~ 128 (188)
T PRK11469 106 WLLVTTAIATSLDAMAVGVGLAF 128 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34578889999999888887654
No 23
>PF04306 DUF456: Protein of unknown function (DUF456); InterPro: IPR007403 This is a family of putative membrane proteins.
Probab=71.76 E-value=75 Score=28.49 Aligned_cols=116 Identities=15% Similarity=0.075 Sum_probs=65.0
Q ss_pred HHHHHHHHhhhhcchhhh-hhhhhcCCCcchhHHHHHHHHHHhhchhHHHHHHHHhhcCCChHHHHHHHHHHHhHHHHHH
Q 011561 63 VVLVIGIMTLHSFGEGSG-VGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQPIVA 141 (483)
Q Consensus 63 ~~~l~~al~lH~~~eGla-iG~~~~~~~~~~~g~~l~~AI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~l~al~t~lGa 141 (483)
.++...+..++.+.+|.. ++..+. ....+-.++-+.-|=++-....++.|-||+-.+ ...+|+
T Consensus 9 ~~l~~~g~l~~~~~~g~~~~~~~~l--------~~~~~l~~l~~~~d~~~~~~~ak~~G~s~~~~~--------ga~iG~ 72 (140)
T PF04306_consen 9 TPLIWLGILLYAFFTGFSEFGWWFL--------AILAVLALLGEVLDYLAGAYGAKRFGASRWGIW--------GAIIGG 72 (140)
T ss_pred HHHHHHHHHHHHHHcCCCcccHHHH--------HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH--------HHHHHH
Confidence 466778888888888776 554431 222233345566666777777788888887665 344677
Q ss_pred HHHHHhhhhchhhHHHHHHHhHHHHHHHHHHhhchhhhhcCCCCchhHHHHHHHHHHHHHHH
Q 011561 142 VPSFICADAFNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPTPVASAATISVAFMEALST 203 (483)
Q Consensus 142 lig~~~~~~~~~~~~~lla~aaG~lLyv~~~eLlPea~~~~~~~~~~~~~~~G~~~m~~l~~ 203 (483)
++|.++... .+.+ .|.++.+-..|++ +.++..+......+.+.|+..-.+.+.
T Consensus 73 IvG~f~~~p----~G~i----iG~~~Ga~l~El~-~~~~~~~A~~~~~ga~~g~~~g~~~k~ 125 (140)
T PF04306_consen 73 IVGFFVLPP----LGLI----IGPFLGAFLGELL-RGKDFRRALRAGIGALVGFLAGTLIKL 125 (140)
T ss_pred HHHHHHhhH----HHHH----HHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777766432 2333 4444444445652 111111122345566666665555544
No 24
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=58.41 E-value=76 Score=24.23 Aligned_cols=30 Identities=10% Similarity=0.060 Sum_probs=15.1
Q ss_pred CCChHHHHHHHH----HHHhHHHHHHHHHHHhhh
Q 011561 120 GVSPQNAMLWSI----ITSLPQPIVAVPSFICAD 149 (483)
Q Consensus 120 g~s~~~a~l~~~----l~al~t~lGalig~~~~~ 149 (483)
+.++++.+..++ ...+++.+|..+|..+.+
T Consensus 16 ~~~~~~~~~~~~~ig~~~~~~~~~G~~~G~~~~~ 49 (67)
T PF02659_consen 16 GISRRIILLIALIIGIFQFIMPLLGLLLGRRLGR 49 (67)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555444444444 444555555555555443
No 25
>PF02673 BacA: Bacitracin resistance protein BacA; InterPro: IPR003824 This is a family of small, highly hydrophobic proteins. Over-expression of this protein in Escherichia coli is associated with bacitracin resistance [], and the protein was originally proposed to be an undecaprenol kinase called bacA. BacA protein, however, does not show undecaprenol phosphokinase activity []. It is now known to be an undecaprenyl pyrophosphate phosphatase (3.6.1.27 from EC) and is renamed UppP. It is not the only protein associated with bacitracin resistance [, ].; GO: 0050380 undecaprenyl-diphosphatase activity, 0016311 dephosphorylation, 0016020 membrane
Probab=58.39 E-value=2e+02 Score=28.59 Aligned_cols=79 Identities=15% Similarity=0.157 Sum_probs=48.3
Q ss_pred hhcCCChHHHHHHHHHHHhHHHHHHHHHHHhhhh-----chhhHHHHHHHhHHHHHHHHHHhhchhhhhcCCCCc-hhHH
Q 011561 117 ASKGVSPQNAMLWSIITSLPQPIVAVPSFICADA-----FNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPTP-VASA 190 (483)
Q Consensus 117 ~~~g~s~~~a~l~~~l~al~t~lGalig~~~~~~-----~~~~~~~lla~aaG~lLyv~~~eLlPea~~~~~~~~-~~~~ 190 (483)
+-.|.+|+++.-++++.+++..+|+.+--..... ...+...+.++.+...........+-.-.++.+.+. ....
T Consensus 173 l~~G~~r~~A~~fSFllsiP~ilga~~l~~~~~~~~~~~~~~~~~~~ig~~~afv~g~l~i~~ll~~~~~~~~~~F~~Y~ 252 (259)
T PF02673_consen 173 LLLGLDREEAARFSFLLSIPAILGAGLLELKDLFSAGLDSGSWPPLLIGFVVAFVVGYLAIKWLLRFLKRRKLRPFAIYR 252 (259)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceeehhHH
Confidence 4578999999999999999999999875544321 123445555555555554444455545555444433 3444
Q ss_pred HHHHH
Q 011561 191 ATISV 195 (483)
Q Consensus 191 ~~~G~ 195 (483)
+++|.
T Consensus 253 ~~lg~ 257 (259)
T PF02673_consen 253 IILGI 257 (259)
T ss_pred hhHHH
Confidence 44444
No 26
>PF02673 BacA: Bacitracin resistance protein BacA; InterPro: IPR003824 This is a family of small, highly hydrophobic proteins. Over-expression of this protein in Escherichia coli is associated with bacitracin resistance [], and the protein was originally proposed to be an undecaprenol kinase called bacA. BacA protein, however, does not show undecaprenol phosphokinase activity []. It is now known to be an undecaprenyl pyrophosphate phosphatase (3.6.1.27 from EC) and is renamed UppP. It is not the only protein associated with bacitracin resistance [, ].; GO: 0050380 undecaprenyl-diphosphatase activity, 0016311 dephosphorylation, 0016020 membrane
Probab=57.77 E-value=79 Score=31.42 Aligned_cols=77 Identities=9% Similarity=-0.098 Sum_probs=55.0
Q ss_pred HhcCCchHHHHHHHHHHhhhhHHHHHHHHHh---h---cChhhHHHHHHHHHhhh--HHhHHHHHhhhhcCCc-hhHHHH
Q 011561 380 YGATASLPASLAAAALIGFMGPTSAIGAILA---G---IDYSGLDHVMVFACGGL--LPSFGRIVKRAASLDT-RKGSCG 450 (483)
Q Consensus 380 ~~~~~s~~~~~~~~~~~~l~~plGa~ig~~~---~---~~~~~~~~lla~aaG~~--yv~~~ellpe~~~~~~-~~~~~~ 450 (483)
.-.|.+|+++..++++.++|..+|+.+--.. . ...++...+.++....+ |++..-++--.++++. ...+++
T Consensus 173 l~~G~~r~~A~~fSFllsiP~ilga~~l~~~~~~~~~~~~~~~~~~~ig~~~afv~g~l~i~~ll~~~~~~~~~~F~~Y~ 252 (259)
T PF02673_consen 173 LLLGLDREEAARFSFLLSIPAILGAGLLELKDLFSAGLDSGSWPPLLIGFVVAFVVGYLAIKWLLRFLKRRKLRPFAIYR 252 (259)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceeehhHH
Confidence 3578999999999999999999998775333 1 12355566777766666 8888877755555543 557888
Q ss_pred HHHHHH
Q 011561 451 LIFGVG 456 (483)
Q Consensus 451 ~~~G~~ 456 (483)
+++|..
T Consensus 253 ~~lg~~ 258 (259)
T PF02673_consen 253 IILGII 258 (259)
T ss_pred hhHHHh
Confidence 888865
No 27
>PRK12554 undecaprenyl pyrophosphate phosphatase; Reviewed
Probab=52.29 E-value=1.4e+02 Score=30.05 Aligned_cols=79 Identities=11% Similarity=-0.126 Sum_probs=53.4
Q ss_pred hcCCchHHHHHHHHHHhhhhHHHHHHHHHh---hcC---hhhHHHHHHHHHhhh--HHhHHHHHhhhhcCCc-hhHHHHH
Q 011561 381 GATASLPASLAAAALIGFMGPTSAIGAILA---GID---YSGLDHVMVFACGGL--LPSFGRIVKRAASLDT-RKGSCGL 451 (483)
Q Consensus 381 ~~~~s~~~~~~~~~~~~l~~plGa~ig~~~---~~~---~~~~~~lla~aaG~~--yv~~~ellpe~~~~~~-~~~~~~~ 451 (483)
-.|.+|..+..++++.++|..+|+.+--.. ... .+....+.|+....+ |++..-++--.++++- ...++++
T Consensus 180 ~~G~~r~~Aa~fSFllsiP~i~gA~~l~~~~~~~~~~~~~~~~~~~~g~i~afi~~~l~i~~ll~~~~~~~~~~Fa~Yr~ 259 (276)
T PRK12554 180 LLGLTREAAARFSFLLAIPAVFGAGLLELYKIFHDPNASTLLGPTAVAFIVAFIVGYISIAWFMNFLKKGSLKYFAIYRI 259 (276)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEEehHHH
Confidence 358999999999999999999998875331 111 122234556665555 7777777754445442 5678899
Q ss_pred HHHHHHHH
Q 011561 452 IFGVGFAT 459 (483)
Q Consensus 452 ~~G~~l~~ 459 (483)
++|..+..
T Consensus 260 ~lG~~~l~ 267 (276)
T PRK12554 260 ILGVLLLI 267 (276)
T ss_pred HHHHHHHH
Confidence 99987653
No 28
>PRK00281 undecaprenyl pyrophosphate phosphatase; Reviewed
Probab=51.44 E-value=1.8e+02 Score=29.17 Aligned_cols=78 Identities=13% Similarity=-0.067 Sum_probs=53.8
Q ss_pred hcCCchHHHHHHHHHHhhhhHHHHHHHHHh---hc--ChhhHHHHHHHHHhhh--HHhHHHHHhhhhcCCc-hhHHHHHH
Q 011561 381 GATASLPASLAAAALIGFMGPTSAIGAILA---GI--DYSGLDHVMVFACGGL--LPSFGRIVKRAASLDT-RKGSCGLI 452 (483)
Q Consensus 381 ~~~~s~~~~~~~~~~~~l~~plGa~ig~~~---~~--~~~~~~~lla~aaG~~--yv~~~ellpe~~~~~~-~~~~~~~~ 452 (483)
-.|.+|..+..++++.++|..+|+.+--.. .. ..+....+.|+....+ |++..-++--.++++- ...+++++
T Consensus 178 ~~G~~r~~Aa~fSFLlsiPai~gA~~l~~~~~~~~~~~~~~~~~~~g~i~afi~g~~~I~~ll~~~~~~~~~~F~~Yri~ 257 (268)
T PRK00281 178 LLGLSREAAAEFSFLLAIPAMLGASLLDLLKLFHLLSAADLPLLAVGFVVAFVVALIAIKWLLKYIKRHSFTPFAIYRII 257 (268)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceehHHHHHH
Confidence 468899999999999999999998875332 11 0122234566665555 8888777755555543 56788899
Q ss_pred HHHHHH
Q 011561 453 FGVGFA 458 (483)
Q Consensus 453 ~G~~l~ 458 (483)
+|..+.
T Consensus 258 lG~i~l 263 (268)
T PRK00281 258 LGALLL 263 (268)
T ss_pred HHHHHH
Confidence 997665
No 29
>COG1968 BacA Undecaprenyl pyrophosphate phosphatase [Lipid transport and metabolism]
Probab=50.28 E-value=2.4e+02 Score=28.33 Aligned_cols=80 Identities=11% Similarity=-0.042 Sum_probs=55.6
Q ss_pred cCCchHHHHHHHHHHhhhhHHHHHHHHHh-h----cChhhHHHHHHHHHhhh--HHhHHHHHhhhhcCCc-hhHHHHHHH
Q 011561 382 ATASLPASLAAAALIGFMGPTSAIGAILA-G----IDYSGLDHVMVFACGGL--LPSFGRIVKRAASLDT-RKGSCGLIF 453 (483)
Q Consensus 382 ~~~s~~~~~~~~~~~~l~~plGa~ig~~~-~----~~~~~~~~lla~aaG~~--yv~~~ellpe~~~~~~-~~~~~~~~~ 453 (483)
-|.+|+.+.-++++.+.|+.+||..--.. . ..........|+.+... |++..-++--.++++- ...++.+++
T Consensus 180 lG~~r~~AaefSFlLaIP~m~GA~~l~l~k~~~~~~~~~~~~l~vg~i~AFvv~~~~I~~ll~~i~~~~~~~F~~Yrivl 259 (270)
T COG1968 180 LGLSREAAAEFSFLLAIPAMFGASALDLFKSGDALSAADLPILLVGFIVAFVVSLIAIKFLLRFIKRHSFIPFAIYRIVL 259 (270)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeehHHHHHHH
Confidence 57889999999999999999998776433 1 22233345666666655 7777666655555553 667888889
Q ss_pred HHHHHHHH
Q 011561 454 GVGFATLC 461 (483)
Q Consensus 454 G~~l~~~~ 461 (483)
|.++....
T Consensus 260 gi~~l~~~ 267 (270)
T COG1968 260 GIVVLVLL 267 (270)
T ss_pred HHHHHHHH
Confidence 98776554
No 30
>COG3859 Predicted membrane protein [Function unknown]
Probab=45.88 E-value=1.4e+02 Score=27.69 Aligned_cols=70 Identities=14% Similarity=0.095 Sum_probs=42.4
Q ss_pred HHhhcChhhHHHHHHHHHhhhHHhHHHHHhhhhcCCchhHHHHHHHHHHHHHHHHHHHhHhhhcCCCCCCCCCc
Q 011561 408 ILAGIDYSGLDHVMVFACGGLLPSFGRIVKRAASLDTRKGSCGLIFGVGFATLCLTCTKLVCLHTPYCNSAPEA 481 (483)
Q Consensus 408 ~~~~~~~~~~~~lla~aaG~~yv~~~ellpe~~~~~~~~~~~~~~~G~~l~~~~l~~~~~~~~~~~~~~~~~~~ 481 (483)
|....+|.+..+++++.+ +.+.-......+..+.+..-..+.|..+....=+.+-..+=+-++-+.||+-
T Consensus 74 Y~lhpsQ~~ldYilaf~~----iG~aG~F~~~~~~~~~k~i~~~~~~~~~av~lRyl~HfisGivFfgsyApkG 143 (185)
T COG3859 74 YILHPSQVLLDYILAFMA----IGFAGLFASSVRKQKKKLINKALGGVFIAVFLRYLFHFISGIVFFGSYAPKG 143 (185)
T ss_pred hhccHHHHHHHhhHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeccCCCC
Confidence 444667888888888877 4444444333332222222333445455555556778888888999999874
No 31
>COG1971 Predicted membrane protein [Function unknown]
Probab=41.40 E-value=3.2e+02 Score=25.95 Aligned_cols=23 Identities=30% Similarity=0.342 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHhhhhhhHHhhh
Q 011561 326 LQSFLSCGAVALHALAEGLALGV 348 (483)
Q Consensus 326 ~~~~~~~~al~lH~~~EGlaiG~ 348 (483)
+...++.++.++++++-|+.++-
T Consensus 108 ~~~~~laiatSidal~vG~~~a~ 130 (190)
T COG1971 108 KELILLAIATSIDALAVGVGLAF 130 (190)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHH
Confidence 33567888889888877776653
No 32
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.86 E-value=94 Score=26.75 Aligned_cols=33 Identities=15% Similarity=0.060 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHHhhhh---chh--hHHHHHHHhHHHHH
Q 011561 135 LPQPIVAVPSFICADA---FNK--FLPFCTGFAAGCMI 167 (483)
Q Consensus 135 l~t~lGalig~~~~~~---~~~--~~~~lla~aaG~lL 167 (483)
..+.+|+.+|+++... +++ +...+++|++|++.
T Consensus 54 sGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~ln 91 (116)
T COG5336 54 SGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLN 91 (116)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 3567888888877543 233 34566677777654
No 33
>PRK11469 hypothetical protein; Provisional
Probab=34.06 E-value=3.6e+02 Score=25.33 Aligned_cols=47 Identities=6% Similarity=0.148 Sum_probs=21.4
Q ss_pred HHHHHHhhhhHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhHHHHHHHH
Q 011561 360 MVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAIGAI 408 (483)
Q Consensus 360 l~~aI~lH~ipeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~plGa~ig~ 408 (483)
++++..+.++--+++.+.. ..+.++++.+..++.++..+.+..++|+
T Consensus 9 laialsmDaF~v~ia~G~~--~~~~~~~~~~~~~l~~g~~q~~m~~~g~ 55 (188)
T PRK11469 9 LAFGMSMDAFAASIGKGAT--LHKPKFSEALRTGLIFGAVETLTPLIGW 55 (188)
T ss_pred HHHHHHHHHHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444433333 2344555555555555555544444443
No 34
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=32.09 E-value=6.8e+02 Score=27.04 Aligned_cols=112 Identities=15% Similarity=0.167 Sum_probs=62.4
Q ss_pred CCChHHHHHHHHHHHhHHHHHHHHHHHhhh--hchhhHHHHHHHhHHHHHHH-------HHHhhchhhhhcCCCC-c---
Q 011561 120 GVSPQNAMLWSIITSLPQPIVAVPSFICAD--AFNKFLPFCTGFAAGCMIWM-------VIAEVLPDAFKEASPT-P--- 186 (483)
Q Consensus 120 g~s~~~a~l~~~l~al~t~lGalig~~~~~--~~~~~~~~lla~aaG~lLyv-------~~~eLlPea~~~~~~~-~--- 186 (483)
|.+.++.+..+++.....++.+.+|+.... ..+++.-+.+++-.|.+++- .+.+++|+.++..-.- .
T Consensus 345 g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~ 424 (477)
T PF11700_consen 345 GPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAIT 424 (477)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHH
Confidence 444447776666666677777777765432 22334445555555555543 3679999977732110 1
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhcccCCCCCccchhhhhhhhccchhhHHHHHHHhhh
Q 011561 187 VASAATISVAFMEALSTLFQNLSHDYNSQDASGYFVSLLFGLGPLLGGIVLLAFAHA 243 (483)
Q Consensus 187 ~~~~~~~G~~~m~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~ 243 (483)
--...++|=+++-++....+. ++ ++..+-+.=|++|+.++..+|.
T Consensus 425 gk~ss~lGPll~g~i~~~tg~-------~r-----~g~~~l~~lf~~gl~ll~~v~~ 469 (477)
T PF11700_consen 425 GKASSWLGPLLFGLITDATGS-------QR-----YGFLFLLVLFLIGLILLFFVDV 469 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-------ch-----hHHHHHHHHHHHHHHHHhhccc
Confidence 123334454444444443321 12 5666667777788888877665
No 35
>PRK13755 putative mercury transport protein MerC; Provisional
Probab=28.98 E-value=3.7e+02 Score=23.74 Aligned_cols=91 Identities=18% Similarity=0.150 Sum_probs=48.2
Q ss_pred hHHhhhhccccchhHHHHHHHHHhhhhHHHHHHHHHHHhcC--CchHHHHHHHHHHhhhhHHHHHHHHHhhcChhhHHHH
Q 011561 343 GLALGVAAPKAYGLGQHMVLPVSLHGLPRGAAVASCIYGAT--ASLPASLAAAALIGFMGPTSAIGAILAGIDYSGLDHV 420 (483)
Q Consensus 343 GlaiG~s~~~~~~~g~~l~~aI~lH~ipeg~a~~~~l~~~~--~s~~~~~~~~~~~~l~~plGa~ig~~~~~~~~~~~~l 420 (483)
|-|||..|.+..+ ++++|.+..=|+.-+.+.++- .+.|+-.. ...++..|.=.+.+.+.-....+..++
T Consensus 34 GAAIGLGFLsq~E-------GLFi~~LlPlFA~iALlanalgW~sHRQW~R--s~lG~iGP~lvl~~~~~~~~~~ws~~l 104 (139)
T PRK13755 34 GAAIGLGFLSQYE-------GLFISTLLPLFAAIALLANALGWFSHRQWLR--SALGMIGPALVLAAVFLLLGNGWSANL 104 (139)
T ss_pred HHHHhhhHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhcchhHHHHHHHHHHHHhhhHHHHH
Confidence 6667777666655 455555555565555444442 12221111 234555666666664332223344444
Q ss_pred HHHHHhhh-HHhHHHHHhhhhcC
Q 011561 421 MVFACGGL-LPSFGRIVKRAASL 442 (483)
Q Consensus 421 la~aaG~~-yv~~~ellpe~~~~ 442 (483)
+=..-..| -+++-|++..++++
T Consensus 105 ~Y~gLalMv~vsiWD~vsPa~rr 127 (139)
T PRK13755 105 LYVGLALMVGVSIWDFVSPAHRR 127 (139)
T ss_pred HHHHHHHHHHHHHHHhcCccccC
Confidence 44444556 77778888777765
No 36
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=28.10 E-value=5.3e+02 Score=24.53 Aligned_cols=53 Identities=17% Similarity=0.210 Sum_probs=31.5
Q ss_pred HHHHHHHHhhchhHHHHHHHHhhcCCChHHHHHHHHHHHhHHHHHHHHHHHhhhh
Q 011561 96 LVTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQPIVAVPSFICADA 150 (483)
Q Consensus 96 ~l~~AI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~l~al~t~lGalig~~~~~~ 150 (483)
.+.+|..+-.+--+++.+ +.+.+.+.+..+..+++..+++.+|..+|..+.+.
T Consensus 5 llaials~Daf~vgi~~G--~~~~~~~~~~~l~ig~~~~~~~~lg~~~G~~~~~~ 57 (206)
T TIGR02840 5 LLAFAVSLDSFGVGIAYG--LRKIKIPFLSNLIIAVISGLFIFISMLLGKFLAKF 57 (206)
T ss_pred HHHHHHHHHHHHHHHHHH--HhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555444444 33333345666667777778888888888776543
No 37
>PRK12554 undecaprenyl pyrophosphate phosphatase; Reviewed
Probab=26.71 E-value=6.6e+02 Score=25.19 Aligned_cols=81 Identities=12% Similarity=0.099 Sum_probs=45.3
Q ss_pred hcCCChHHHHHHHHHHHhHHHHHHHHHHHhhhhc-----hhhHHHHHHHhHHHHHHHHHHhhchhhhhcCCCC-chhHHH
Q 011561 118 SKGVSPQNAMLWSIITSLPQPIVAVPSFICADAF-----NKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPT-PVASAA 191 (483)
Q Consensus 118 ~~g~s~~~a~l~~~l~al~t~lGalig~~~~~~~-----~~~~~~lla~aaG~lLyv~~~eLlPea~~~~~~~-~~~~~~ 191 (483)
-.|.+|..+.-++++-++++.+|+.+--...... ......+.++..-..........+=+-.++.+.+ .....+
T Consensus 180 ~~G~~r~~Aa~fSFllsiP~i~gA~~l~~~~~~~~~~~~~~~~~~~~g~i~afi~~~l~i~~ll~~~~~~~~~~Fa~Yr~ 259 (276)
T PRK12554 180 LLGLTREAAARFSFLLAIPAVFGAGLLELYKIFHDPNASTLLGPTAVAFIVAFIVGYISIAWFMNFLKKGSLKYFAIYRI 259 (276)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEEehHHH
Confidence 4589999999999999999999988855422101 1111233444433333333333333444444433 245566
Q ss_pred HHHHHHH
Q 011561 192 TISVAFM 198 (483)
Q Consensus 192 ~~G~~~m 198 (483)
++|....
T Consensus 260 ~lG~~~l 266 (276)
T PRK12554 260 ILGVLLL 266 (276)
T ss_pred HHHHHHH
Confidence 6666554
No 38
>PRK00281 undecaprenyl pyrophosphate phosphatase; Reviewed
Probab=25.66 E-value=6.8e+02 Score=24.98 Aligned_cols=82 Identities=16% Similarity=0.167 Sum_probs=46.7
Q ss_pred hhcCCChHHHHHHHHHHHhHHHHHHHHHHHhhhhc----hhhHHHHHHHhHHHHHHHHHHhhchhhhhcCCCCc-hhHHH
Q 011561 117 ASKGVSPQNAMLWSIITSLPQPIVAVPSFICADAF----NKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPTP-VASAA 191 (483)
Q Consensus 117 ~~~g~s~~~a~l~~~l~al~t~lGalig~~~~~~~----~~~~~~lla~aaG~lLyv~~~eLlPea~~~~~~~~-~~~~~ 191 (483)
+-.|.+|..+.-++++-+++..+|+.+--...... ......+.++....+.+....+.+=+-.++.+... ....+
T Consensus 177 l~~G~~r~~Aa~fSFLlsiPai~gA~~l~~~~~~~~~~~~~~~~~~~g~i~afi~g~~~I~~ll~~~~~~~~~~F~~Yri 256 (268)
T PRK00281 177 LLLGLSREAAAEFSFLLAIPAMLGASLLDLLKLFHLLSAADLPLLAVGFVVAFVVALIAIKWLLKYIKRHSFTPFAIYRI 256 (268)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceehHHHHH
Confidence 34689999999999999999999988855432111 11112344444433443333344444444444433 34456
Q ss_pred HHHHHHH
Q 011561 192 TISVAFM 198 (483)
Q Consensus 192 ~~G~~~m 198 (483)
.+|..+.
T Consensus 257 ~lG~i~l 263 (268)
T PRK00281 257 ILGALLL 263 (268)
T ss_pred HHHHHHH
Confidence 6666554
No 39
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=24.51 E-value=1.3e+02 Score=24.61 Aligned_cols=47 Identities=6% Similarity=0.040 Sum_probs=31.4
Q ss_pred hhhHHHHHHHhHHHHHHHHHHhhchhhhhcCCCCchhHHHHHHHHHHHH
Q 011561 152 NKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPTPVASAATISVAFMEA 200 (483)
Q Consensus 152 ~~~~~~lla~aaG~lLyv~~~eLlPea~~~~~~~~~~~~~~~G~~~m~~ 200 (483)
...+++.+++ +|..+|. ....-||..++.+.....++++.|..+.+-
T Consensus 8 ~~iLgi~l~~-~~~~Ly~-lr~~~Pev~Rd~D~~fs~vgLl~g~IL~~~ 54 (84)
T PF07444_consen 8 SYILGIILIL-GGLALYF-LRFFRPEVSRDYDIFFSSVGLLYGLILWFQ 54 (84)
T ss_pred HHHHHHHHHH-HHHHHHH-HHHHCcchhhhhhHHHHHHHHHHHHHHHHH
Confidence 3456677777 4555554 345679988888777777777777666544
No 40
>PF04306 DUF456: Protein of unknown function (DUF456); InterPro: IPR007403 This is a family of putative membrane proteins.
Probab=24.08 E-value=5.2e+02 Score=23.06 Aligned_cols=113 Identities=17% Similarity=0.027 Sum_probs=62.0
Q ss_pred HHHHHHHHHHhhhhhhHH-hhhhccccchhHHHHHHHHHhhhhHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhHHHHHH
Q 011561 328 SFLSCGAVALHALAEGLA-LGVAAPKAYGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAIG 406 (483)
Q Consensus 328 ~~~~~~al~lH~~~EGla-iG~s~~~~~~~g~~l~~aI~lH~ipeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~plGa~i 406 (483)
..++..++.++.+.+|.. ++.. .+ ..+.+-..+-+.-|=++-....++.|.||+..+ ...+|+++
T Consensus 9 ~~l~~~g~l~~~~~~g~~~~~~~-----~l-~~~~~l~~l~~~~d~~~~~~~ak~~G~s~~~~~--------ga~iG~Iv 74 (140)
T PF04306_consen 9 TPLIWLGILLYAFFTGFSEFGWW-----FL-AILAVLALLGEVLDYLAGAYGAKRFGASRWGIW--------GAIIGGIV 74 (140)
T ss_pred HHHHHHHHHHHHHHcCCCcccHH-----HH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH--------HHHHHHHH
Confidence 357778999999988876 4431 12 222233345667788888888899999998765 23356666
Q ss_pred HHHhhcChhhHHHHHHHHHhhhHHhHHHHHhhhhcCCchhHHHHHHHHHHHHHH
Q 011561 407 AILAGIDYSGLDHVMVFACGGLLPSFGRIVKRAASLDTRKGSCGLIFGVGFATL 460 (483)
Q Consensus 407 g~~~~~~~~~~~~lla~aaG~~yv~~~ellpe~~~~~~~~~~~~~~~G~~l~~~ 460 (483)
|.++.. ..+.+.+...|+ -..|++-....++..+...+.+.|+....+
T Consensus 75 G~f~~~---p~G~iiG~~~Ga---~l~El~~~~~~~~A~~~~~ga~~g~~~g~~ 122 (140)
T PF04306_consen 75 GFFVLP---PLGLIIGPFLGA---FLGELLRGKDFRRALRAGIGALVGFLAGTL 122 (140)
T ss_pred HHHHhh---HHHHHHHHHHHH---HHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 655421 113344444443 344664211111113444455555544433
No 41
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=24.04 E-value=6.1e+02 Score=23.90 Aligned_cols=8 Identities=13% Similarity=0.156 Sum_probs=3.2
Q ss_pred HHHHHhhh
Q 011561 421 MVFACGGL 428 (483)
Q Consensus 421 la~aaG~~ 428 (483)
.++.+|.+
T Consensus 119 ~~i~~G~~ 126 (206)
T PF06570_consen 119 VSIVGGLV 126 (206)
T ss_pred HHHHHHHH
Confidence 33444433
No 42
>PRK09757 PTS system N-acetylgalactosamine-specific transporter subunit IIC; Provisional
Probab=22.88 E-value=7.7e+02 Score=24.62 Aligned_cols=46 Identities=24% Similarity=0.121 Sum_probs=27.7
Q ss_pred cChhhHHHHHHHHHhhh-HHhHHHHHhhhhcCCchhHHHHHHHHHHHHHH
Q 011561 412 IDYSGLDHVMVFACGGL-LPSFGRIVKRAASLDTRKGSCGLIFGVGFATL 460 (483)
Q Consensus 412 ~~~~~~~~lla~aaG~~-yv~~~ellpe~~~~~~~~~~~~~~~G~~l~~~ 460 (483)
..|.+.--.+..++|.+ .+-+.-++--..++ +.+.-+++||++..-
T Consensus 173 ~iP~~v~~GL~vaggmLPAvGfAmLl~~m~~k---~~~~ff~lGF~l~ay 219 (267)
T PRK09757 173 AMPAWLTHGFEVAGGILPAVGFGLLLRVMFKA---QYIPYLIAGFLFVCY 219 (267)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHhhc---chHHHHHHHHHHHHH
Confidence 44556666788888988 88888776433332 123345555555433
No 43
>TIGR03055 photo_alph_chp2 putative photosynthetic complex assembly protein 2. This uncharacterized protein family was identified, by the method of partial phylogenetic profiling, as having a matching phylogenetic distribution to that of the photosynthetic reaction center of the alpha-proteobacterial type. It is nearly always encoded near other photosynthesis-related genes, including puhA.
Probab=22.51 E-value=3.5e+02 Score=26.74 Aligned_cols=59 Identities=12% Similarity=0.103 Sum_probs=41.5
Q ss_pred HHHHHHhhcCCChHHHHHHHHHHHhHHHHHHHHHHHhhhhchhhHHHHHHHhHHHHHHH
Q 011561 111 AVSMMLASKGVSPQNAMLWSIITSLPQPIVAVPSFICADAFNKFLPFCTGFAAGCMIWM 169 (483)
Q Consensus 111 a~~~~L~~~g~s~~~a~l~~~l~al~t~lGalig~~~~~~~~~~~~~lla~aaG~lLyv 169 (483)
+.+..+.......++...+++..+....+.++.|+.....+....+..++|.++.++--
T Consensus 13 sTG~iL~~ld~~~~~~~~~s~~~~t~ll~~~l~gl~~t~~d~sv~gaY~aF~~al~vWg 71 (245)
T TIGR03055 13 STGAVLWLLDSLGRSTHLRSVVAGLPLLTGGLWGLSATADDVSVGGAYVAFTCAIFVWG 71 (245)
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH
Confidence 34444441233344457777777777888888888776667788899999999988764
No 44
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=22.20 E-value=6.5e+02 Score=23.50 Aligned_cols=66 Identities=14% Similarity=0.304 Sum_probs=43.3
Q ss_pred HHHHHHHhhchhHHHHHHHHhhcCCChHHHHHHHHHHHhHHH-HHHHHHHHhhhhchhhHHHHHHHhHHHHHHHHHHhhc
Q 011561 97 VTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQP-IVAVPSFICADAFNKFLPFCTGFAAGCMIWMVIAEVL 175 (483)
Q Consensus 97 l~~AI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~l~al~t~-lGalig~~~~~~~~~~~~~lla~aaG~lLyv~~~eLl 175 (483)
+.++++..++|+. .|+|++.|+...++..= +-...+.++.+. ..++.-+.+..++|.+..++.
T Consensus 16 ~vi~~~~~~lp~~------------~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~----~~~i~~igG~~Ll~~a~k~~~ 79 (183)
T PF03741_consen 16 FVIAMIFRKLPPE------------QRRKALFWGIIGAIVLRIIFIFLASWLLSI----FPWILLIGGLFLLYIAIKLLH 79 (183)
T ss_pred HHHHHHHhCCCHH------------HhhhhHHHhHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777766 56677777776654332 222233333222 267888899999999999998
Q ss_pred hhh
Q 011561 176 PDA 178 (483)
Q Consensus 176 Pea 178 (483)
++.
T Consensus 80 ~~~ 82 (183)
T PF03741_consen 80 EER 82 (183)
T ss_pred hcc
Confidence 865
No 45
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.14 E-value=2.7e+02 Score=24.06 Aligned_cols=31 Identities=26% Similarity=0.043 Sum_probs=21.6
Q ss_pred hhhHHHHHHHHHh----hcChhhHH--HHHHHHHhhh
Q 011561 398 FMGPTSAIGAILA----GIDYSGLD--HVMVFACGGL 428 (483)
Q Consensus 398 l~~plGa~ig~~~----~~~~~~~~--~lla~aaG~~ 428 (483)
..+.+|+.+||++ +.+|..+- .++||-+|.+
T Consensus 54 sGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~l 90 (116)
T COG5336 54 SGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVL 90 (116)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 3456888889876 46665543 5788888877
No 46
>COG2431 Predicted membrane protein [Function unknown]
Probab=22.00 E-value=7.9e+02 Score=24.88 Aligned_cols=63 Identities=19% Similarity=0.251 Sum_probs=34.4
Q ss_pred HHHHHhhcCCCh------HHHHHHHHHHHhHHHHHHHHHHHhhhhchhhHHHHHHHhHHHHHHHHHHhhchh
Q 011561 112 VSMMLASKGVSP------QNAMLWSIITSLPQPIVAVPSFICADAFNKFLPFCTGFAAGCMIWMVIAEVLPD 177 (483)
Q Consensus 112 ~~~~L~~~g~s~------~~a~l~~~l~al~t~lGalig~~~~~~~~~~~~~lla~aaG~lLyv~~~eLlPe 177 (483)
++..+.++|.+. +|-+...+++-++..+|+.+..++.+.+ +..-+++++|.==|--..-++-|
T Consensus 145 iGi~l~n~g~~~~~~~Lnk~gl~l~~i~ilssliGG~iaa~~l~lp---l~~~lAmasG~GWYSlsG~ll~~ 213 (297)
T COG2431 145 IGIQLGNSGISLRQVLLNKRGLILAFITLLSSLIGGLIAAFLLDLP---LTTGLAMASGFGWYSLSGILLTE 213 (297)
T ss_pred HHHHhccccchhhhHHhccchHHHHHHHHHHHHHHHHHHHHHHhcc---HHHHHHHHhccchhhhhhHHHhc
Confidence 455555555442 3445566667677778888877765532 23344555554444444334444
No 47
>PF00873 ACR_tran: AcrB/AcrD/AcrF family; InterPro: IPR001036 The Escherichia coli acrA and acrB genes encode a multi-drug efflux system that is believed to protect the bacterium against hydrophobic inhibitors []. The E. coli AcrB protein is a transporter that is energized by proton-motive force and that shows the widest substrate specificity among all known multidrug pumps, ranging from most of the currently used antibiotics, disinfectants, dyes, and detergents to simple solvents. The structure of ligand-free AcrB shows that it is a homotrimer of 110kDa per subunit. Each subunit contains 12 transmembrane helices and two large periplasmic domains (each exceeding 300 residues) between helices 1 and 2, and helices 7 and 8. X-ray analysis of the overexpressed AcrB protein demonstrated that the three periplasmic domains form, in the centre, a funnel-like structure and a connected narrow (or closed) pore. The pore is opened to the periplasm through three vestibules located at subunit interfaces. These vestibules were proposed to allow direct access of drugs from the periplasm as well as the outer leaflet of the cytoplasmic membrane. The three transmembrane domains of AcrB protomers form a large, 30A-wide central cavity that spans the cytoplasmic membrane and extends to the cytoplasm X-ray crystallographic structures of the trimeric AcrB pump from E. coli with four structurally diverse ligands demonstrated that three molecules of ligand bind simultaneously to the extremely large central cavity of 5000 cubic angstroms, primarily by hydrophobic, aromatic stacking and van der Waals interactions. Each ligand uses a slightly different subset of AcrB residues for binding. The bound ligand molecules often interact with each other, stabilising the binding. ; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 2V50_B 1T9U_A 2HRT_B 3NOC_A 3NOG_A 4DX7_A 1OYD_A 3AOB_A 1T9V_A 4DX6_B ....
Probab=21.69 E-value=9.3e+02 Score=28.69 Aligned_cols=102 Identities=17% Similarity=0.105 Sum_probs=60.5
Q ss_pred HHhhhhhhHHhhhhccccchhHHHHHHHHHhhhhHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhHHHHHHHH----Hhh
Q 011561 336 ALHALAEGLALGVAAPKAYGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAIGAI----LAG 411 (483)
Q Consensus 336 ~lH~~~EGlaiG~s~~~~~~~g~~l~~aI~lH~ipeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~plGa~ig~----~~~ 411 (483)
.=.++|+|+-+-. ..|...-+.=.+.-+..|+-+|+.+.....---...||.. ++.+++.|+..+..+ +++
T Consensus 306 ~~~~lp~~~~~~~--~~d~s~~i~~~i~~l~~~~~~g~~lv~~vl~lfl~~~r~~---liv~~~IPisi~~t~~~m~~~g 380 (1021)
T PF00873_consen 306 LQKTLPEGLEITI--VYDQSEYIEESINNLISNLLIGIILVVLVLLLFLRNWRSA---LIVALSIPISILGTFIFMYLFG 380 (1021)
T ss_dssp HGGGSSTTEEEEE--EEESHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHH---HHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHhcCCccceEEE--EEechHHHHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHH---HHHHHHHHHHHHHHHHHHHHcC
Confidence 3344666665544 3344444556777788999999988876655443333332 333344444433332 336
Q ss_pred cChhhHH-HHHHHHHhhh---HHhHHHHHhhhhcC
Q 011561 412 IDYSGLD-HVMVFACGGL---LPSFGRIVKRAASL 442 (483)
Q Consensus 412 ~~~~~~~-~lla~aaG~~---yv~~~ellpe~~~~ 442 (483)
.+-+... ..+.++.|.+ -|+..|-+-+..+.
T Consensus 381 ~slN~~SL~gl~laiG~lVDdaIVV~Eni~r~~~~ 415 (1021)
T PF00873_consen 381 ISLNIMSLAGLILAIGMLVDDAIVVVENIYRHLEE 415 (1021)
T ss_dssp TTBEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHhHHHhcccccccceehHHHHHHHHHH
Confidence 6655544 5788888998 78888887654443
Done!