BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 011563
         (483 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q54QH3|ODR4_DICDI Protein odr-4 homolog OS=Dictyostelium discoideum GN=DDB_G0283829
           PE=3 SV=1
          Length = 456

 Score = 94.0 bits (232), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 172/375 (45%), Gaps = 41/375 (10%)

Query: 17  DRLSQSGLSAQVGLLIGKLSPTLDRG-FIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSK 75
           ++L QS +  ++GLLIG+ S   ++  F+    PTP N       S + DD    P    
Sbjct: 16  NKLEQSHI--EIGLLIGQESEISEQQTFVLGLFPTPLN------ISNTDDDNNNKPINI- 66

Query: 76  SQPSDSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAA 135
               DSIS  IDK+WI E+  QV+ ML GGI +VGIY+   DS     T+      +   
Sbjct: 67  ----DSIS-SIDKEWILEYCHQVNIMLYGGIDIVGIYMIIPDS----DTLNEKNNESFIM 117

Query: 136 KAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLKTGLVLKTLRTFKC 195
           K +  +    + + L  I YS ++    N   T++     L+  ++K   V+  L     
Sbjct: 118 KLLKSIHTIINSKSLQFISYS-KKTGLINGKATNSTQLYRLKSTEIK---VINNLENEFL 173

Query: 196 TYNFSLRLPIRLVGASNTQTFSDILRQGISVHANEL-RGAKAVVDGNFVVNDEPCSTDGL 254
           + +  L + I+L   +   +F ++ +  I +  N+L + +  +++  FV  +E  S    
Sbjct: 174 SLHCILPIDIKLKSKNGMISFENLKKDIIEIFENQLFKESTLLIENEFVSGNEIISQQFK 233

Query: 255 HEVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPISQAFSEIKGDIIMSL 314
            + +L + LL +   ++ S   +      + +    A++   E I  AF  IK DII S+
Sbjct: 234 SKSKLNIDLLIN-QLDSISTSSLEFNFNNNNNTHCIAYIHQLEQIKTAFKFIKKDIIKSV 292

Query: 315 QSRLDVICDEVDEDLAPTAGGGE--EASNEKPVSKLILHSLRKTCGLSFPRRVFVPWLAD 372
           +SR D++ +E+  +        +  + S E P+             L  PRRV + WL++
Sbjct: 293 ESRFDLLFNEISSNNNNNDNDQDNIKLSKESPI-------------LELPRRVNIQWLSN 339

Query: 373 TY-ICDYLQPSETLE 386
              ICDYL  + T++
Sbjct: 340 KISICDYLSSNGTID 354


>sp|Q4PJX1|ODR4_MOUSE Protein odr-4 homolog OS=Mus musculus GN=Odr4 PE=2 SV=2
          Length = 447

 Score = 92.0 bits (227), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 106/459 (23%), Positives = 192/459 (41%), Gaps = 83/459 (18%)

Query: 29  GLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQPSDSISLVIDK 88
           GLLIG+ S   D  ++     TP  +         ++DK K P              +D+
Sbjct: 28  GLLIGQCSSQKD--YVILATRTPPKE--------EQNDKVKQPRAKLDN--------LDE 69

Query: 89  DWIAEHARQVSRMLLGGIKVVGIYVWAT---DSAFKNSTIELCQTVNAAAKAVPILEIDS 145
           +W  EHA QVSRML GG+ V+GI++  T      F+N+   L  ++  +     + ++  
Sbjct: 70  EWATEHASQVSRMLPGGLVVLGIFIITTLELADDFQNALRRLIFSMEKSMSRKRLWDVTE 129

Query: 146 D---ERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLK-TGLVLKTLRTFKCTYNFSL 201
           D   ER+ +HI  S ++ +CR   +    +S+  RP D K    V  +  +  CT + ++
Sbjct: 130 DEVSERVTLHICSSTKKISCRTYDVQDPKSSA--RPADWKYQSRVSASWLSLDCTVHVNI 187

Query: 202 RLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVND------------EPC 249
            +P  L   S + T     + G++  A ++     +++G    ND               
Sbjct: 188 HIP--LSATSVSYTLEKNTKSGLTRWAKQIENGVYLINGQVKGNDCDLLEGQKKSRGNTQ 245

Query: 250 STDGLHEVELLLPLLNDTSAEACSQKDVV-GLLILSGSVCSFAFLTPKEP-ISQAFSEIK 307
           +T    +V +L  LL ++   + +   +  G + L G+V   A++    P +  A   +K
Sbjct: 246 ATAHSFDVRVLTQLLLNSDHRSTATVQICSGSVNLRGNVKCRAYIHSNRPKVKDAVQAVK 305

Query: 308 GDIIMSLQSRLDVICDEVDEDLAPTAGGGEEASNEKPVSKLILHSLRKTCGLSFPRRVFV 367
            DI+ ++  R +++ ++                       L+L+ + +      P+RVFV
Sbjct: 306 RDILNTVADRCEILFED-----------------------LLLNEIPEKKNYELPQRVFV 342

Query: 368 PWLADT-YICDYLQPSETLEVLKEHCVELMSMEALSDSSSILDVEVEAPSVISKSFWDVV 426
           P    T  +CDY    E+ E +++H  E++  E       I D+E+              
Sbjct: 343 PLPGSTVMLCDYKFGDESAEEIRDHFSEMLDHEI-----QIEDLEIAEE----------- 386

Query: 427 VPFSSGGSSSSSASKGIETSKEKTEYPVKTANFNIMAAV 465
           V  +   SS +S +    TS+E+ E P KT    I   +
Sbjct: 387 VNTACMTSSVNSEASLTNTSEEQPEQPKKTIGVKIQQNI 425


>sp|Q5SWX8|ODR4_HUMAN Protein odr-4 homolog OS=Homo sapiens GN=ODR4 PE=2 SV=1
          Length = 454

 Score = 87.4 bits (215), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 123/510 (24%), Positives = 217/510 (42%), Gaps = 95/510 (18%)

Query: 1   MVNTVVVEKP--QLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEA 58
           M  T +VE+   Q LS    ++  G +   GLLIG+ S   D   +    P P+ +  E 
Sbjct: 1   MGRTYIVEETVGQYLS---NINLQGKAFVSGLLIGQCSSQKDYVILATRTP-PKEEQSE- 55

Query: 59  ACSVSKDDKKKPPSKSKSQPSDSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWAT-- 116
                  + K P +K  +         +D++W  EHA QVSRML GG+ V+G+++  T  
Sbjct: 56  -------NLKHPKAKLDN---------LDEEWATEHACQVSRMLPGGLLVLGVFIITTLE 99

Query: 117 -DSAFKNSTIELCQTVNAA---AKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNIT 172
             + F+N+   L   V  +    +     E +  ER+ +HI  S ++  CR   I    +
Sbjct: 100 LANDFQNALRRLMFAVEKSINRKRLWNFTEEEVSERVTLHICASTKKIFCRTYDIHDPKS 159

Query: 173 SSCLRPCDLK-TGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANEL 231
           S+  RP D K    +  +  + +CT + ++ +P  L   S + T     + G++  A E+
Sbjct: 160 SA--RPADWKYQSGLSSSWLSLECTVHINIHIP--LSATSVSYTLEKNTKNGLTRWAKEI 215

Query: 232 RGAKAVVDGNFVVNDEPC---------------STDGLHEVELLLPLLNDTSAEACSQKD 276
                +++G   V DE C               +T    +V +L  LL ++   + +   
Sbjct: 216 ENGVYLINGQ--VKDEDCDLLEGQKKSSRGNTQATSHSFDVRVLTQLLLNSDHRSTATVQ 273

Query: 277 VV-GLLILSGSVCSFAFLTPKEP-ISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAG 334
           +  G + L G+V   A++   +P +  A   +K DI+ ++  R +++ +++  +  P   
Sbjct: 274 ICSGSVNLKGAVKCRAYIHSSKPKVKDAVQAVKRDILNTVADRCEMLFEDLLLNEIP--- 330

Query: 335 GGEEASNEKPVSKLILHSLRKTCGLSFPRRVFVPWLADT-YICDYLQPSETLEVLKEHCV 393
                  EK  S+   H L        P RVFVP    T  +CDY    E+ E +++H  
Sbjct: 331 -------EKKDSEKEFHVL--------PYRVFVPLPGSTVMLCDYKFDDESAEEIRDHF- 374

Query: 394 ELMSMEALSDSSSILDVEVEAPSVISKSFWDVVVPFSSGGSSSSSASKGIETSKEKTEYP 453
               ME L  +  I D+E+   +             +   SS +S +    T  E+ + P
Sbjct: 375 ----MEMLDHTIQIEDLEIAEETNT-----------ACMSSSMNSQASLDNTDDEQPKQP 419

Query: 454 VKTA-------NFNIMAAVFFLLLSILVGF 476
           +KT        N  ++AA    +L+  + F
Sbjct: 420 IKTTMLLKIQQNIGVIAAFTVAVLAAGISF 449


>sp|Q5R6E9|ODR4_PONAB Protein odr-4 homolog OS=Pongo abelii GN=ODR4 PE=2 SV=1
          Length = 454

 Score = 83.2 bits (204), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 109/456 (23%), Positives = 196/456 (42%), Gaps = 79/456 (17%)

Query: 60  CSVSKD----DKKKPPSKSKSQPSDSISLVID---KDWIAEHARQVSRMLLGGIKVVGIY 112
           CS  KD      + PP + +S+    +   +D   ++W  EHA QVSRML GG+ V+G++
Sbjct: 34  CSSQKDYVILATRTPPKEEQSENLKHLKAKLDNLDEEWATEHACQVSRMLPGGLLVLGVF 93

Query: 113 VWAT---DSAFKNSTIELCQTVNAA---AKAVPILEIDSDERLLVHIGYSPRRYT-CRNC 165
           +  T    + F+N+   L   V  +    +     E +  ER+ +HI  S ++   CR  
Sbjct: 94  IITTLELANDFQNALRRLMFAVEKSINRKRLWNFTEEEVSERVTLHICASTKKKIFCRTY 153

Query: 166 TITSNITSSCLRPCDLK-TGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGI 224
            I    +S+  RP D K    +  +  + +CT + ++ +P  L   S + T     + G+
Sbjct: 154 DIHDPKSSA--RPADWKYQSGLSSSWLSLECTVHINIHIP--LSATSVSYTLEKNTKNGL 209

Query: 225 SVHANELRGAKAVVDGNFVVNDEPC--------------STDGLHEVELLLPLLNDTSAE 270
           +  A E+     +++G   V DE C              +T    +V +L  LL ++   
Sbjct: 210 TRWAKEIENGVYLINGQ--VKDEDCDLLEGQKKSRGNTQATSHSFDVRVLTQLLLNSDHR 267

Query: 271 ACSQKDVV-GLLILSGSVCSFAFLTPKEP-ISQAFSEIKGDIIMSLQSRLDVICDEVDED 328
           + +   +  G + L G+V   A++   +P +  A   +K DI+ ++  R +++ +++  +
Sbjct: 268 STATVQICSGSVNLKGAVKCRAYIHSSKPKVKDAVQAVKRDILNTVADRCEILFEDLLLN 327

Query: 329 LAPTAGGGEEASNEKPVSKLILHSLRKTCGLSFPRRVFVPWLADT-YICDYLQPSETLEV 387
             P          EK  S+   H L        P RVFVP    T  +CDY    E+ E 
Sbjct: 328 EIP----------EKKDSEKEFHVL--------PYRVFVPLPGSTVMLCDYKFDDESAEE 369

Query: 388 LKEHCVELMSMEALSDSSSILDVEVEAPSVISKSFWDVVVPFSSGGSSSSSASKGIETSK 447
           +++H      ME L  +  I D+E+   +             +   SS +S +    T  
Sbjct: 370 IRDHF-----MEMLDHTIKIEDLEIAEETNT-----------ACMSSSMNSQASLDNTDD 413

Query: 448 EKTEYPVKTA-------NFNIMAAVFFLLLSILVGF 476
           E+ + P+KT        N  ++AA    +L+  + F
Sbjct: 414 EQPKQPIKTTMLLKIQQNIGVIAAFTVAVLAAGISF 449


>sp|Q0VA36|ODR4_XENTR Protein odr-4 homolog OS=Xenopus tropicalis GN=odr4 PE=2 SV=2
          Length = 448

 Score = 82.4 bits (202), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 164/412 (39%), Gaps = 79/412 (19%)

Query: 18  RLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQ 77
           +L Q   +   GLLIG+ S   D   +    P  ++ + E     SK +           
Sbjct: 17  KLIQQQKAYVTGLLIGQYSSQRDYAVLAAQTPQKEDQSEETKSGFSKLEG---------- 66

Query: 78  PSDSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFK---NSTIELCQTVNAA 134
                   ID +W++ HA Q+ RML GG+ V+G+++  +    K   N   +L  TV  +
Sbjct: 67  --------IDDEWVSMHASQLGRMLPGGLMVLGVFLMTSPDLSKDAQNVLRKLVFTVEKS 118

Query: 135 AKAVPILEIDSD---ERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLKTGLVLKTLR 191
           +    +   D D   ER+ +HI  + ++ TCR   I  N   S  +P D K      +  
Sbjct: 119 SMKNRLWNFDDDDVSERVTLHICSATKKITCRTYDI--NDPKSTPKPADWKYQSSGLSWL 176

Query: 192 TFKCTYNFSLRLPIRLVGASNT-QTFSDILRQGISVHANELRGAKAVVDGNFVVNDEPCS 250
           T  C+    + +P  L  +S T Q     +R G+   A E+  +  + +G   V D+  S
Sbjct: 177 TIDCSVRVDVTIP--LTSSSLTYQERQKSIRLGLVKWAKEIEDSLVLFNGQ--VKDK--S 230

Query: 251 TDGLHE-------------------VELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFA 291
            D   E                   V    PL++ T + A  Q     L I     C   
Sbjct: 231 ADLFEEQKKSSRSSSHYSPQIITANVLTAAPLIDSTRSTALVQPCKSSLTIQGVVKCCGY 290

Query: 292 FLTPKEPISQAFSEIKGDIIMSLQSRLDVICDEVDEDL---APTAGGGEEASNEKPVSKL 348
             + +  +  A   +K DI+ ++Q+R    C+ + ED+    P+ G   E          
Sbjct: 291 IHSNRPKVKDALQAVKRDILNTIQAR----CEMLFEDMMLNGPSKGTENEV--------- 337

Query: 349 ILHSLRKTCGLSFPRRVFVPWLADTY-ICDYLQPSETLEVLKEHCVELMSME 399
                   C L  P+RVFVP    +  +CDYL   ET   L+ H +E+M  E
Sbjct: 338 --------CPL--PQRVFVPIKGSSLKLCDYLFGDETSSDLQSHFLEIMDQE 379


>sp|A3KNB6|ODR4_XENLA Protein odr-4 homolog OS=Xenopus laevis GN=odr4 PE=2 SV=1
          Length = 446

 Score = 80.1 bits (196), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 165/410 (40%), Gaps = 77/410 (18%)

Query: 18  RLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQ 77
           +L Q   +   GL+IG+ S   D   +    P  ++   E    +SK ++          
Sbjct: 17  KLVQQQKACITGLIIGQYSSQRDYAVLTAQTPQKEDQNEEKKPGLSKLEE---------- 66

Query: 78  PSDSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAKA 137
                   ID +W++ HA QV RML GG+ V+G+++  T    K++   L + V A  K+
Sbjct: 67  --------IDDEWVSMHASQVGRMLPGGLMVLGVFLMTTPDLSKDAQTILRKLVFAVEKS 118

Query: 138 V---PILEIDSD---ERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLKTGLVLKTLR 191
                +   D D   ER+ +HI  S ++ TCR   I  N   S  +P D K    + +  
Sbjct: 119 SMKNRLWNFDEDDVSERVTLHICSSTKKITCRTYDI--NDPKSTPKPADWKYQNSVLSWL 176

Query: 192 TFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVNDEPCST 251
           T  C     + +P+     S + T+ +  RQ  S+    ++  K + D   + N +    
Sbjct: 177 TVDCNVRVDVTIPL----TSPSLTYQE--RQK-SIRLGLVKWTKEIEDSVVLFNGQYKDK 229

Query: 252 DG-LHEVELLL--------------------PLLNDTSAEACSQKDVVGLLILSGSVCSF 290
           +G L E +                       PL+++T + A  Q     L I     C  
Sbjct: 230 NGDLFEEQKKSSRSSSHYSPQIITANFLNASPLIDNTRSTALVQPCKSSLTIQGVMKCRG 289

Query: 291 AFLTPKEPISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAGGGEEASNEKPVSKLIL 350
              + +  +  A   IK D++ ++Q R    C+ + ED+       E  +          
Sbjct: 290 FIHSNRPKVKDAMQAIKRDLLNTIQDR----CELLFEDMMLNGPSNENDA---------- 335

Query: 351 HSLRKTCGLSFPRRVFVPWL-ADTYICDYLQPSETLEVLKEHCVELMSME 399
                 C L  P+RVFVP   ++  +CDYL   ET   L+ H +E+M  E
Sbjct: 336 ------CPL--PQRVFVPINGSNLKLCDYLFGDETTSDLQSHFLEIMDQE 377


>sp|Q5ZKH8|ODR4_CHICK Protein odr-4 homolog OS=Gallus gallus GN=ODR4 PE=2 SV=1
          Length = 446

 Score = 71.6 bits (174), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 165/391 (42%), Gaps = 65/391 (16%)

Query: 29  GLLIGKLSPTLDRGFIFDFIPTP-QNDAGEAACSVSKDDKKKPPSKSKSQPSDSISLVID 87
           GLLIG+ SP   R +I     TP + +  E   S SK D                   ID
Sbjct: 28  GLLIGQCSP--QRDYIIRAARTPPKEEQKEGNTSPSKLDS------------------ID 67

Query: 88  KDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAKAVPILEI---- 143
           ++W   HA Q+SRML GG+ V+ +++ AT    K+    L + + +  K++    +    
Sbjct: 68  EEWFTAHASQISRMLPGGLLVLSVFIIATPELSKDCQNTLRKLIFSIEKSLTKRRLWKPA 127

Query: 144 --DSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLKTGLVLK-TLRTFKCTYNFS 200
             D  +R  + I  + ++  CR   +     S+  +P D K    L  +  +  CT N +
Sbjct: 128 DEDVSDRAALQICSATKKIVCRTYDVQDPKGSA--KPADWKYQSALSASWLSLGCTVNVN 185

Query: 201 LRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVND------------EP 248
           + +P  L+  S         + G++  + ++  +  +++G    ND              
Sbjct: 186 IHIP--LLATSPNHDLEKNTKNGLNRWSKQIEDSIFLINGQVKDNDIELLEGQKKLRGNT 243

Query: 249 CSTDGLHEVELLLPLLNDTSAEACSQKDVV-GLLILSGSVCSFAFLTPKEP-ISQAFSEI 306
            S   + +V++L  L   +S  + +   V  G + L G+V   A++   +P + +A   +
Sbjct: 244 HSGTQIFDVKVLTQLSQGSSHRSTATVQVCSGSINLKGAVKCRAYVHNNKPKVKEAVLAL 303

Query: 307 KGDIIMSLQSRLDVICDEVDEDLAPTAGGGEEASNEKPVSKLILHSLRKTCGLSFPRRVF 366
           K DII +L  R    C+ + EDL    G        K   + + H L        P+R+F
Sbjct: 304 KRDIINTLSDR----CEILFEDLILNEGRC------KKNFERVYHVL--------PQRLF 345

Query: 367 VPWL-ADTYICDYLQPSETLEVLKEHCVELM 396
           VP+  ++  + DY    E    ++E  VE++
Sbjct: 346 VPFAGSNVMLSDYKFGDEAAGEIQERFVEML 376


>sp|Q8I7F8|ODR4_CAEEL Odorant response abnormal protein 4 OS=Caenorhabditis elegans
           GN=odr-4 PE=2 SV=1
          Length = 475

 Score = 38.9 bits (89), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 32/54 (59%)

Query: 83  SLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAK 136
           S +++ +W+++HA ++ RML GGI VVGI  ++    F +    + +T+    K
Sbjct: 100 SKMLEDEWMSDHAERLLRMLPGGIHVVGIAWFSDKKTFSDRKSHIHKTLGRIQK 153


>sp|Q9VTX8|ODR4_DROME Protein odr-4 homolog OS=Drosophila melanogaster GN=CG10616 PE=1
           SV=2
          Length = 492

 Score = 32.7 bits (73), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 15/49 (30%), Positives = 27/49 (55%)

Query: 275 KDVVGLLILSGSVCSFAFLTPKEPISQAFSEIKGDIIMSLQSRLDVICD 323
           ++  G L +SG + S  F  P+  I+     ++ D++ SL +R+ V CD
Sbjct: 307 REFSGTLHMSGIITSKVFCNPRNSIADVKRFLRDDVLRSLITRIQVYCD 355


>sp|P32180|HSLU_PASHA ATP-dependent protease ATPase subunit HslU OS=Pasteurella
           haemolytica GN=hslU PE=3 SV=2
          Length = 440

 Score = 32.7 bits (73), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 208 VGASNTQTFSDILRQGISVHANELRGAKAVVDGNFV 243
           +GA    T  + L  GIS  A+E RG K ++D N+V
Sbjct: 387 IGARRLHTVLERLMDGISFDASERRGEKIIIDENYV 422


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.133    0.382 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,294,365
Number of Sequences: 539616
Number of extensions: 6856154
Number of successful extensions: 18794
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 18771
Number of HSP's gapped (non-prelim): 15
length of query: 483
length of database: 191,569,459
effective HSP length: 121
effective length of query: 362
effective length of database: 126,275,923
effective search space: 45711884126
effective search space used: 45711884126
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)