Query 011563
Match_columns 483
No_of_seqs 96 out of 106
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 10:44:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011563.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011563hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2o95_A 26S proteasome non-ATPa 70.6 13 0.00045 33.8 8.0 71 23-118 32-102 (187)
2 4b4t_V 26S proteasome regulato 60.3 18 0.00062 35.9 7.3 114 3-155 25-143 (306)
3 4e0q_A COP9 signalosome comple 58.5 17 0.00059 31.9 6.1 66 24-117 32-97 (141)
4 2kks_A Uncharacterized protein 57.2 46 0.0016 28.8 8.7 78 12-118 9-86 (146)
5 4b4t_U RPN8, 26S proteasome re 49.4 39 0.0013 33.8 7.7 78 15-117 21-98 (338)
6 3bbz_A P protein, phosphoprote 46.8 12 0.0004 27.5 2.4 16 298-313 32-47 (49)
7 1xrd_A LH-1, light-harvesting 36.9 25 0.00084 26.1 2.9 25 456-480 10-34 (52)
8 1oi0_A AF2198, hypothetical pr 34.4 71 0.0024 26.8 6.0 21 100-120 57-77 (124)
9 1lgh_A LH II, B800/850, light 29.9 42 0.0014 25.3 3.2 25 456-480 15-39 (56)
10 1yyp_B DNA polymerase, POL; pr 29.5 16 0.00055 23.4 0.7 10 361-370 1-10 (26)
11 3rzv_A STAM-binding protein; u 26.9 1.6E+02 0.0054 27.6 7.4 83 3-118 42-127 (211)
12 2znr_A AMSH-like protease; met 24.9 1.1E+02 0.0037 27.7 5.8 49 3-53 9-59 (178)
13 2kcq_A MOV34/MPN/PAD-1 family; 24.2 1.1E+02 0.0037 26.6 5.5 27 26-53 22-48 (153)
No 1
>2o95_A 26S proteasome non-ATPase regulatory subunit 7; PSMD7, MOV34, JAB1/MPN, metal-free dimer, UN function; HET: SO4 12P ETE PG4 PGE; 1.95A {Homo sapiens} PDB: 2o96_A
Probab=70.60 E-value=13 Score=33.76 Aligned_cols=71 Identities=14% Similarity=0.215 Sum_probs=45.8
Q ss_pred CCcceEEEEeeecCCCCCccEEEEecCCCCCcccccccccCCCCCCCCCCCCCCCCCCcccccCCHHHHHHHHHHhhhcc
Q 011563 23 GLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQPSDSISLVIDKDWIAEHARQVSRML 102 (483)
Q Consensus 23 ~~~~~~GLLIGq~s~~~~rd~Vv~li~TP~~d~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~iD~eWVaeHArQVsRML 102 (483)
...-++|+|+|+... +.=.|....|.|..+.+... ..-.+|.++..+.-++--+.=
T Consensus 32 ~~~~V~G~LLG~~~~--~~v~V~~~f~lp~~~~~~~~----------------------~~~~~d~ey~~~m~~~~~~v~ 87 (187)
T 2o95_A 32 NQKRVVGVLLGSWQK--KVLDVSNSFAVPFDEDDKDD----------------------SVWFLDHDYLENMYGMFKKVN 87 (187)
T ss_dssp CCSCCEEEEEEEESS--SEEEEEEEEEECEEECSSCT----------------------TSEEECHHHHHHHHHHHHTTS
T ss_pred CCcEEEEEEEEEEcC--CEEEEEEEEEeCCcccCCCc----------------------chhhcCHHHHHHHHHHHHHhC
Confidence 345799999999965 55556777799876443200 012477777665433322222
Q ss_pred CcceEEEEEEEEecch
Q 011563 103 LGGIKVVGIYVWATDS 118 (483)
Q Consensus 103 PGGi~VlGifv~~~~~ 118 (483)
| +..|||-|-.+|.-
T Consensus 88 ~-~~~iVGWY~s~~~~ 102 (187)
T 2o95_A 88 A-RERIVGWYHTGPKL 102 (187)
T ss_dssp S-SCEEEEEEECCSSC
T ss_pred C-CCCEEEEEcCCCcC
Confidence 2 79999999988864
No 2
>4b4t_V 26S proteasome regulatory subunit RPN11; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=60.27 E-value=18 Score=35.85 Aligned_cols=114 Identities=19% Similarity=0.223 Sum_probs=64.6
Q ss_pred cEEEecChhhHHHHHHHhhcCCcceEEEEeeecCCCCCccE-EEEecCCCCCcccccccccCCCCCCCCCCCCCCCCCCc
Q 011563 3 NTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGF-IFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQPSDS 81 (483)
Q Consensus 3 Rtvi~ee~~v~~y~~~L~~~~~~~~~GLLIGq~s~~~~rd~-Vv~li~TP~~d~~~~~~~~~~~~~~~~~~k~~~~~~~~ 81 (483)
.+|.++--.+-+-+.-.......-++|+|+|.... ++.+ |.+..|.|..+++..
T Consensus 25 ~~V~is~lallkm~~Ha~~~~~~eV~GlLlG~~~~--~~~v~Vt~~f~~P~~~~~~~----------------------- 79 (306)
T 4b4t_V 25 ETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFVD--DYTVNVVDVFAMPQSGTGVS----------------------- 79 (306)
T ss_dssp CEEEECHHHHHHHHHHTCSCSSSCCEEEEEEEEET--TTEEEEEEEECCCCEESSSC-----------------------
T ss_pred CEEEEeHHHHHHHHHHhcCCCCceEEEEEeeEEcC--CeEEEEEEEEeCCcCCCCCc-----------------------
Confidence 35566654343433333332234689999999765 4433 566678887655431
Q ss_pred ccccCCHHH---HHHHHHHhhhccCcceEEEEEEEEecc-hhhccchHHHHHHHHHHHHhcCcccCCCCceEEEEEec
Q 011563 82 ISLVIDKDW---IAEHARQVSRMLLGGIKVVGIYVWATD-SAFKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGY 155 (483)
Q Consensus 82 ~~~~iD~eW---VaeHArQVsRMLPGGi~VlGifv~~~~-~~~~~~~~~L~qll~~v~~a~~l~~~~~~e~l~Lhi~~ 155 (483)
...+|.++ +.++.++|.| +..|||-|-.+|. ..|-+...+-.|..+.- ....-|.|-|++
T Consensus 80 -v~~~d~~y~~~m~~~~~~v~~----~~~vVGWYhShP~~~~~~S~~Di~tq~~yQ~---------~~~~~V~lV~Dp 143 (306)
T 4b4t_V 80 -VEAVDDVFQAKMMDMLKQTGR----DQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQ---------LNSRAVAVVVDP 143 (306)
T ss_dssp -EECCCHHHHHHHHHHHHHHSC----CCCCSEEEEECCSSSCCCCHHHHHHHHHHHH---------HCSSCEEEEECS
T ss_pred -hhcCCHHHHHHHHHHHHHhCC----CcceeeEEecCCCCCCcCCHHHHHHHHHHHh---------cCCCcEEEEECC
Confidence 12355565 4456677776 4579999999986 44444333333443331 124456676665
No 3
>4e0q_A COP9 signalosome complex subunit 6; MPN (MPR1P and PAD1P N-terminal) domain, unknown function; 2.50A {Drosophila melanogaster}
Probab=58.46 E-value=17 Score=31.92 Aligned_cols=66 Identities=21% Similarity=0.322 Sum_probs=47.3
Q ss_pred CcceEEEEeeecCCCCCccEEEEecCCCCCcccccccccCCCCCCCCCCCCCCCCCCcccccCCHHHHHHHHHHhhhccC
Q 011563 24 LSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQPSDSISLVIDKDWIAEHARQVSRMLL 103 (483)
Q Consensus 24 ~~~~~GLLIGq~s~~~~rd~Vv~li~TP~~d~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~iD~eWVaeHArQVsRMLP 103 (483)
...++|+|+|+... ..=-|....+-|.+++++. -.+|.+|..+--++--+.-|
T Consensus 32 ~~~V~G~LLG~~~~--~~veV~nsF~~p~~~~~~~-------------------------~~~d~~y~~~m~~~~k~v~~ 84 (141)
T 4e0q_A 32 PRQVYGALIGKQKG--RNIEIMNSFELKTDVIGDE-------------------------TVINKDYYNKKEQQYKQVFS 84 (141)
T ss_dssp CCEEEEEEEEEEET--TEEEEEEEEECCEEEETTE-------------------------EEECHHHHHHHHHHHHHHST
T ss_pred CcEEEEEEEEEEeC--CEEEEEEEEEecccCCCCc-------------------------eeecHHHHHHHHHHHHHhCC
Confidence 45799999999864 5445556668887554321 25788998877777666666
Q ss_pred cceEEEEEEEEecc
Q 011563 104 GGIKVVGIYVWATD 117 (483)
Q Consensus 104 GGi~VlGifv~~~~ 117 (483)
...|||-|-.+|.
T Consensus 85 -~e~iVGWY~s~~~ 97 (141)
T 4e0q_A 85 -DLDFIGWYTTGDN 97 (141)
T ss_dssp -TCEEEEEEEEEC-
T ss_pred -CccEEEEEeCCCC
Confidence 4999999999874
No 4
>2kks_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; NMR {Desulfitobacterium hafniense}
Probab=57.17 E-value=46 Score=28.83 Aligned_cols=78 Identities=15% Similarity=0.140 Sum_probs=46.1
Q ss_pred hHHHHHHHhhcCCcceEEEEeeecCCCCCccEEEEecCCCCCcccccccccCCCCCCCCCCCCCCCCCCcccccCCHHHH
Q 011563 12 LLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQPSDSISLVIDKDWI 91 (483)
Q Consensus 12 v~~y~~~L~~~~~~~~~GLLIGq~s~~~~rd~Vv~li~TP~~d~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~iD~eWV 91 (483)
+.+.+.-.....-.=++|||+|+... +...|..++|.|...... . --.+|.+-.
T Consensus 9 l~~i~~ha~~~~p~E~cGlL~G~~~~--~~~~v~~~~p~~n~~~~~-----------------------~-~f~~dp~~~ 62 (146)
T 2kks_A 9 MEEMLAHARQALPNEACGLLGGRRDG--DDRWVERVYPLNNLDQSP-----------------------E-HFSMDPREQ 62 (146)
T ss_dssp HHHHHHHHHHHTTSCEEEEEEEEEET--TEEEEEEEECCCCCSCCS-----------------------S-SCCCCHHHH
T ss_pred HHHHHHHHHhcCCcceEEEEEEEEcC--CCcEEEEEEECCCcCCCC-----------------------c-eEEECHHHH
Confidence 45444444332233489999999865 566777788887432211 0 123554333
Q ss_pred HHHHHHhhhccCcceEEEEEEEEecch
Q 011563 92 AEHARQVSRMLLGGIKVVGIYVWATDS 118 (483)
Q Consensus 92 aeHArQVsRMLPGGi~VlGifv~~~~~ 118 (483)
.+-. -.|..-|+.|+|+|=..|..
T Consensus 63 ~~~~---~~~~~~g~~ivG~~HSHP~~ 86 (146)
T 2kks_A 63 LTAV---KDMRKNGWVMLGNFHSHPAT 86 (146)
T ss_dssp HHHH---HHHHHHTCEEEEEEEEESSS
T ss_pred HHHH---HHHHHCCCEEEEEEeCCCcC
Confidence 2222 22335689999999999974
No 5
>4b4t_U RPN8, 26S proteasome regulatory subunit RPN8; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=49.37 E-value=39 Score=33.84 Aligned_cols=78 Identities=13% Similarity=0.210 Sum_probs=47.5
Q ss_pred HHHHHhhcCCcceEEEEeeecCCCCCccEEEEecCCCCCcccccccccCCCCCCCCCCCCCCCCCCcccccCCHHHHHHH
Q 011563 15 AEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQPSDSISLVIDKDWIAEH 94 (483)
Q Consensus 15 y~~~L~~~~~~~~~GLLIGq~s~~~~rd~Vv~li~TP~~d~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~iD~eWVaeH 94 (483)
+..+.......-++|.|+|+..+ ..=-|.+..+.|-++++... ..-.+|.+|..+-
T Consensus 21 H~~R~~~~~~~rViG~LLG~~~~--~~veV~nsF~~p~~e~~~~~----------------------~~~~~D~~y~~~m 76 (338)
T 4b4t_U 21 HYERTQTKENKRCVGVILGDANS--STIRVTNSFALPFEEDEKNS----------------------DVWFLDHNYIENM 76 (338)
T ss_dssp HHHHHTTTCCSCCEEEEEEEECS--SEEEEEEEEECCEEECSSST----------------------TCEEECHHHHHHH
T ss_pred HHHHhhcCCCCeEEEEEEeEEcC--CEEEEEEEEEeccccCCCCC----------------------ccccccHHHHHHH
Confidence 34443333455799999999754 43345556688866554311 1234788887654
Q ss_pred HHHhhhccCcceEEEEEEEEecc
Q 011563 95 ARQVSRMLLGGIKVVGIYVWATD 117 (483)
Q Consensus 95 ArQVsRMLPGGi~VlGifv~~~~ 117 (483)
-.+--+.-|- ..|||-|-.++.
T Consensus 77 ~~~~kkV~~~-e~iVGWY~tg~~ 98 (338)
T 4b4t_U 77 NEMCKKINAK-EKLIGWYHSGPK 98 (338)
T ss_dssp HHHHHHHCCS-CEEEEEEECCSS
T ss_pred HHHHhhcCcc-CCEEEEEecCCC
Confidence 4444343443 899999988764
No 6
>3bbz_A P protein, phosphoprotein; molten globule, viral protein, replication; 2.10A {Mumps virus}
Probab=46.77 E-value=12 Score=27.52 Aligned_cols=16 Identities=44% Similarity=0.590 Sum_probs=13.5
Q ss_pred CHHHHHHHHHHHHHHh
Q 011563 298 PISQAFSEIKGDIIMS 313 (483)
Q Consensus 298 ~v~eAi~aIK~DIirS 313 (483)
+-.+..++||+|||||
T Consensus 32 ~tE~q~k~iKr~IIRs 47 (49)
T 3bbz_A 32 STEDALNDIKRDIIRS 47 (49)
T ss_dssp CSHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHh
Confidence 4467789999999997
No 7
>1xrd_A LH-1, light-harvesting protein B-880, alpha chain; membrane spanning helix, pigment binding, photosynthesis, membrane protein; NMR {Rhodospirillum rubrum} SCOP: f.3.1.1
Probab=36.93 E-value=25 Score=26.14 Aligned_cols=25 Identities=24% Similarity=0.535 Sum_probs=19.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhh
Q 011563 456 TANFNIMAAVFFLLLSILVGFVLIA 480 (483)
Q Consensus 456 ~~~~~~~~a~~~ll~~i~~~~~~~~ 480 (483)
|+..-++.+++.+.+++++||++..
T Consensus 10 Prr~Lva~~~fl~vlAl~IHfilLS 34 (52)
T 1xrd_A 10 PRQALVGLATFLFVLALLIHFILLS 34 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4566777788888999999998753
No 8
>1oi0_A AF2198, hypothetical protein AF2198; proteasome, deubiquitination, archaea, hydrolase; 1.5A {Archaeoglobus fulgidus} SCOP: c.97.3.1 PDB: 1r5x_A
Probab=34.42 E-value=71 Score=26.81 Aligned_cols=21 Identities=29% Similarity=0.273 Sum_probs=14.7
Q ss_pred hccCcceEEEEEEEEecchhh
Q 011563 100 RMLLGGIKVVGIYVWATDSAF 120 (483)
Q Consensus 100 RMLPGGi~VlGifv~~~~~~~ 120 (483)
.|.|-|..++|+|-..|....
T Consensus 57 ~~~~~~~~ivG~~HSHP~~~~ 77 (124)
T 1oi0_A 57 DMLPIGMKVFGTVHSHPSPSC 77 (124)
T ss_dssp ----CCCEEEEEEEEESSSCC
T ss_pred eeccCCCEEEEEEEECcCCCC
Confidence 488899999999999997433
No 9
>1lgh_A LH II, B800/850, light harvesting complex II; bacteriochlorophyll, dexter energy transfer, foerster exciton transfer mechanism; HET: BCL LYC DET HTO; 2.40A {Phaeospirillum molischianum} SCOP: f.3.1.1
Probab=29.95 E-value=42 Score=25.29 Aligned_cols=25 Identities=12% Similarity=0.146 Sum_probs=18.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhh
Q 011563 456 TANFNIMAAVFFLLLSILVGFVLIA 480 (483)
Q Consensus 456 ~~~~~~~~a~~~ll~~i~~~~~~~~ 480 (483)
|+..-.+...++.++++++||++..
T Consensus 15 P~~~L~~l~~~v~vlAllIH~~lLs 39 (56)
T 1lgh_A 15 PSTWLPVIWIVATVVAIAVHAAVLA 39 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeHHHHHHHHHHHHHHHHHHHHc
Confidence 3344556677788899999998754
No 10
>1yyp_B DNA polymerase, POL; processivity fold (SAME fold AS HSV UL42, PCNA, and homotrim sliding clamps), replication-transferase complex; HET: DNA; 2.50A {Human herpesvirus 5}
Probab=29.54 E-value=16 Score=23.36 Aligned_cols=10 Identities=30% Similarity=0.527 Sum_probs=8.2
Q ss_pred CCceEEeecC
Q 011563 361 FPRRVFVPWL 370 (483)
Q Consensus 361 lPRRV~vp~~ 370 (483)
||+|+++|-.
T Consensus 1 lP~RiYl~~~ 10 (26)
T 1yyp_B 1 LPRRLHLEPA 10 (26)
T ss_pred CCceEecCHH
Confidence 7999998763
No 11
>3rzv_A STAM-binding protein; ubiquitin hydrolase, endosome-associated deubiquitinat enzyme, hydrolase; 1.67A {Homo sapiens} PDB: 3rzu_A
Probab=26.86 E-value=1.6e+02 Score=27.62 Aligned_cols=83 Identities=19% Similarity=0.137 Sum_probs=46.0
Q ss_pred cEEEecChhhHHHHHHHhhcCC---cceEEEEeeecCCCCCccEEEEecCCCCCcccccccccCCCCCCCCCCCCCCCCC
Q 011563 3 NTVVVEKPQLLSAEDRLSQSGL---SAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQPS 79 (483)
Q Consensus 3 Rtvi~ee~~v~~y~~~L~~~~~---~~~~GLLIGq~s~~~~rd~Vv~li~TP~~d~~~~~~~~~~~~~~~~~~k~~~~~~ 79 (483)
|+|+.....+++++.--.. .. -=++|+|.|+... +.-.|..++. |+..+.+..
T Consensus 42 r~v~Ipk~ll~kfL~~A~~-~tp~~~EvcGlL~Gk~~~--~~~~I~~v~~-ppq~gt~~~-------------------- 97 (211)
T 3rzv_A 42 RHVVVPGRLCPQFLQLASA-NTARGVATCGILCGKLMR--NEFTITHVLI-PKQSAGSDY-------------------- 97 (211)
T ss_dssp CCEEEETTHHHHHHHHHHH-HHHTTCCCEEEEEEEEET--TEEEEEEEEE-CCEEECSSC--------------------
T ss_pred EEEEECHHHHHHHHHHHHh-CCCCCceEEEEEEeEcCC--CCEEEEEEEe-CCccCCCCc--------------------
Confidence 7888888867776654332 21 2367999999864 4333444443 333322110
Q ss_pred CcccccCCHHHHHHHHHHhhhccCcceEEEEEEEEecch
Q 011563 80 DSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDS 118 (483)
Q Consensus 80 ~~~~~~iD~eWVaeHArQVsRMLPGGi~VlGifv~~~~~ 118 (483)
....+++=+-++.. . -|+.+||.|=..|..
T Consensus 98 ---v~~~~~~e~~~~~~--~----~~l~~vGWyHSHP~~ 127 (211)
T 3rzv_A 98 ---CNTENEEELFLIQD--Q----QGLITLGWIHTHPTQ 127 (211)
T ss_dssp ---EEECCHHHHHHHHH--H----HTCEEEEEEEECTTS
T ss_pred ---eeccChHHHHHHHh--h----CCCEEEEEEeCCCCC
Confidence 12233332333322 2 499999999888753
No 12
>2znr_A AMSH-like protease; metal binding protein, alternative splicing, hydrolase, metal-binding, metalloprotease, UBL conjugation pathway, zinc; 1.20A {Homo sapiens} PDB: 2znv_A
Probab=24.94 E-value=1.1e+02 Score=27.71 Aligned_cols=49 Identities=20% Similarity=0.133 Sum_probs=32.0
Q ss_pred cEEEecChhhHHHHHHHhhc-CC-cceEEEEeeecCCCCCccEEEEecCCCCC
Q 011563 3 NTVVVEKPQLLSAEDRLSQS-GL-SAQVGLLIGKLSPTLDRGFIFDFIPTPQN 53 (483)
Q Consensus 3 Rtvi~ee~~v~~y~~~L~~~-~~-~~~~GLLIGq~s~~~~rd~Vv~li~TP~~ 53 (483)
|+|+.....+++++.-.... +. .=++|||.|+... +.-.|-.+++.|..
T Consensus 9 ~~v~i~~~~l~k~l~hA~~~~~~~~EvcGlL~G~~~~--~~~~V~~v~~~pq~ 59 (178)
T 2znr_A 9 RCVVLPEDLCHKFLQLAESNTVRGIETCGILCGKLTH--NEFTITHVIVPKQS 59 (178)
T ss_dssp CCEEEETTHHHHHHHHHHHHHTTTCCCEEEEEEEEET--TEEEEEEEEECCEE
T ss_pred EEEEECHHHHHHHHHHHHhCCCCCceEEEEEeeEecC--CCeEEEEEEeCCcC
Confidence 67888888677765554331 11 2377999999865 55556666677654
No 13
>2kcq_A MOV34/MPN/PAD-1 family; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Salinibacter ruber dsm 13855}
Probab=24.23 E-value=1.1e+02 Score=26.63 Aligned_cols=27 Identities=11% Similarity=0.222 Sum_probs=18.7
Q ss_pred ceEEEEeeecCCCCCccEEEEecCCCCC
Q 011563 26 AQVGLLIGKLSPTLDRGFIFDFIPTPQN 53 (483)
Q Consensus 26 ~~~GLLIGq~s~~~~rd~Vv~li~TP~~ 53 (483)
=++|||+|+... .+...|..++|.|..
T Consensus 22 E~cGlL~G~~~~-~~~~~v~~~~p~~n~ 48 (153)
T 2kcq_A 22 EGCGFLLGTVTD-DGDNRVAALHRATNR 48 (153)
T ss_dssp CCCEEEEEEECT-TSCEEEEEEEESSCC
T ss_pred ceEEEEEEeecc-CCCeEEEEEEECCCC
Confidence 489999999862 143466666777755
Done!