Query 011566
Match_columns 483
No_of_seqs 214 out of 1574
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 10:48:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011566.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011566hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3psg_A Pepsinogen; hydrolase(a 100.0 1.3E-59 4.4E-64 474.9 25.2 308 91-481 45-370 (370)
2 2x0b_A Renin; hydrolase-hormon 100.0 1.1E-59 3.8E-64 476.4 18.3 309 92-481 51-383 (383)
3 1tzs_A Cathepsin E; hydrolase, 100.0 1.2E-57 4.2E-62 458.1 26.9 310 92-483 13-344 (351)
4 3vla_A EDGP; extracellular, in 100.0 8.5E-58 2.9E-62 467.4 23.0 349 92-480 9-398 (413)
5 1dpj_A Proteinase A; proteinas 100.0 2.8E-57 9.4E-62 451.8 24.1 307 92-481 3-329 (329)
6 3aup_A SBG7S, BG, basic 7S glo 100.0 1E-57 3.5E-62 467.0 21.4 342 91-483 9-395 (403)
7 3cms_A Chymosin B; hydrolase, 100.0 9.6E-58 3.3E-62 453.9 18.4 299 93-481 5-323 (323)
8 1am5_A Pepsin, acid proteinase 100.0 4.7E-57 1.6E-61 449.2 22.3 302 93-481 3-324 (324)
9 4aa9_A Chymosin; hydrolase, as 100.0 2.3E-57 7.7E-62 450.9 18.7 298 94-481 3-320 (320)
10 1qdm_A Prophytepsin; aspartic 100.0 1.2E-56 4.2E-61 466.1 24.9 319 91-481 41-478 (478)
11 1mpp_A Pepsin; hydrolase(acid 100.0 6.1E-57 2.1E-61 455.0 20.6 309 92-483 8-357 (361)
12 1j71_A Candidapepsin, aspartic 100.0 4E-57 1.4E-61 451.5 17.7 306 92-483 3-326 (334)
13 1htr_B Gastricsin; aspartyl pr 100.0 2E-56 6.8E-61 445.6 21.8 305 93-481 4-329 (329)
14 3k1w_A Renin; protease, altern 100.0 6.1E-57 2.1E-61 451.7 17.7 316 89-481 5-340 (341)
15 1miq_A Plasmepsin; aspartic pr 100.0 2.3E-56 7.9E-61 451.9 20.3 299 92-481 52-374 (375)
16 3fv3_A SAPP1P-secreted asparti 100.0 3.3E-56 1.1E-60 446.0 20.9 303 92-483 3-331 (339)
17 2qzx_A Candidapepsin-5; aspart 100.0 2.6E-56 8.7E-61 447.2 19.5 309 92-483 3-333 (342)
18 3c9x_A Trichoderma reesei aspa 100.0 4.4E-56 1.5E-60 442.9 20.8 295 100-480 13-329 (329)
19 2apr_A Rhizopuspepsin; hydrola 100.0 1.1E-55 3.7E-60 439.4 22.0 294 99-481 12-324 (325)
20 3pvk_A Candidapepsin-2; hydrol 100.0 5.1E-56 1.8E-60 445.2 19.7 310 92-483 3-333 (342)
21 1oew_A Endothiapepsin; hydrola 100.0 7.6E-56 2.6E-60 441.2 20.3 294 100-480 13-329 (329)
22 1yg9_A Aspartic protease BLA G 100.0 2.4E-55 8.3E-60 437.6 20.8 302 90-481 5-329 (330)
23 3qvc_A Histo-aspartic protease 100.0 9.8E-55 3.3E-59 447.8 22.8 300 91-481 126-449 (451)
24 2bju_A Plasmepsin II; aspartic 100.0 5.1E-55 1.7E-59 449.3 18.2 298 92-481 128-450 (453)
25 3lpj_A Beta-secretase 1; alzhe 100.0 4E-54 1.4E-58 447.0 23.5 322 93-483 65-422 (455)
26 2ewy_A Beta-secretase 2; BACE2 100.0 5.2E-54 1.8E-58 437.1 23.3 321 94-483 5-357 (383)
27 1izd_A Aspartic proteinase; su 100.0 1.8E-54 6E-59 430.2 18.9 291 100-481 13-323 (323)
28 1ibq_A Aspergillopepsin; aspar 100.0 3.1E-54 1.1E-58 428.9 20.2 292 100-481 12-325 (325)
29 2qp8_A Beta-secretase 1; BACE1 100.0 2.9E-53 9.8E-58 433.2 25.0 320 95-483 14-369 (395)
30 1bxo_A Protein (penicillopepsi 100.0 4.2E-54 1.4E-58 427.5 17.3 290 100-481 13-323 (323)
31 1wkr_A Polyporopepsin; hydrola 100.0 4E-53 1.4E-57 423.7 23.0 302 93-483 4-335 (340)
32 3vf3_A Beta-secretase 1; struc 100.0 1.2E-52 4E-57 429.8 24.2 319 96-483 22-376 (402)
33 1t6e_X Xylanase inhibitor; two 100.0 5.7E-52 1.9E-56 421.4 22.5 334 93-481 4-373 (381)
34 1b5f_A Protein (cardosin A); h 100.0 1.9E-42 6.5E-47 328.7 14.0 217 93-373 4-237 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 2.3E-37 8E-42 294.3 15.6 221 223-481 1-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 4.2E-23 1.4E-27 166.2 7.2 89 93-224 4-96 (97)
37 1b5f_B Protein (cardosin A); h 99.7 1.6E-17 5.5E-22 131.2 6.8 84 389-481 2-87 (87)
38 2i1a_A DNA damage-inducible pr 94.1 0.025 8.5E-07 48.1 2.8 33 99-134 22-54 (148)
39 2i1a_A DNA damage-inducible pr 92.8 0.21 7.1E-06 42.3 6.6 26 453-478 109-134 (148)
40 3s8i_A Protein DDI1 homolog 1; 92.8 0.19 6.5E-06 42.7 6.2 27 453-479 108-134 (148)
41 3s8i_A Protein DDI1 homolog 1; 88.7 0.57 1.9E-05 39.7 5.3 30 102-134 23-52 (148)
42 1fmb_A EIAV protease; hydrolas 78.8 1.4 4.9E-05 34.7 3.2 27 103-132 8-34 (104)
43 2hs1_A HIV-1 protease; ultra-h 77.7 1.6 5.5E-05 34.0 3.2 28 104-134 9-36 (99)
44 3ec0_A Protease; HIV-2, inhibi 70.7 3 0.0001 32.4 3.1 28 104-134 9-36 (99)
45 2hah_A Protease, retropepsin; 65.6 4.1 0.00014 32.7 3.0 27 104-134 15-41 (116)
46 1lya_A Cathepsin D; lysosomal 65.5 6.6 0.00022 30.3 4.1 16 348-363 29-44 (97)
47 3liy_A Protease; hydrolase, hy 62.8 4.8 0.00017 32.0 2.8 30 104-134 11-43 (116)
48 3sqf_A Protease; folded monome 57.6 7.7 0.00026 30.9 3.2 28 104-134 10-37 (114)
49 3slz_A GAG-Pro-POL polyprotein 44.7 15 0.00052 30.1 3.1 30 102-134 21-50 (132)
50 1mpp_A Pepsin; hydrolase(acid 44.4 23 0.00078 34.2 5.0 44 295-363 4-49 (361)
51 1bxo_A Protein (penicillopepsi 43.7 20 0.00068 34.0 4.4 32 315-364 14-45 (323)
52 3cms_A Chymosin B; hydrolase, 42.8 25 0.00085 33.3 4.9 42 297-363 2-45 (323)
53 1izd_A Aspartic proteinase; su 41.5 23 0.00078 33.6 4.4 32 315-364 14-45 (323)
54 3ka2_A [L-Ala51;Gly51']HIV-1 p 39.9 18 0.00062 31.9 3.1 29 103-134 8-36 (203)
55 2rsp_A RSV protease; hydrolase 38.5 17 0.0006 29.3 2.5 22 110-134 27-48 (124)
56 1ibq_A Aspergillopepsin; aspar 36.8 23 0.0008 33.5 3.7 32 315-364 13-44 (325)
57 1b5f_A Protein (cardosin A); h 34.8 33 0.0011 30.9 4.1 16 348-363 29-44 (239)
58 1am5_A Pepsin, acid proteinase 28.6 60 0.0021 30.5 5.1 16 348-363 28-43 (324)
59 3aup_A SBG7S, BG, basic 7S glo 28.4 54 0.0018 32.1 4.8 16 348-363 37-52 (403)
60 1wkr_A Polyporopepsin; hydrola 27.9 60 0.002 30.8 4.9 15 348-362 28-42 (340)
61 1j71_A Candidapepsin, aspartic 27.5 55 0.0019 31.0 4.6 16 348-363 28-43 (334)
62 1oew_A Endothiapepsin; hydrola 27.5 50 0.0017 31.2 4.2 16 348-363 31-46 (329)
63 3c9x_A Trichoderma reesei aspa 27.4 50 0.0017 31.2 4.2 17 348-364 31-47 (329)
64 3fv3_A SAPP1P-secreted asparti 26.8 57 0.002 30.9 4.6 16 348-363 28-43 (339)
65 1dpj_A Proteinase A; proteinas 26.7 61 0.0021 30.5 4.7 16 348-363 29-44 (329)
66 2hs1_A HIV-1 protease; ultra-h 26.3 50 0.0017 25.5 3.2 31 317-362 5-35 (99)
67 2qzx_A Candidapepsin-5; aspart 24.7 80 0.0027 29.9 5.2 16 348-363 28-43 (342)
68 4aa9_A Chymosin; hydrolase, as 24.5 57 0.002 30.6 4.0 16 348-363 27-42 (320)
69 1fmb_A EIAV protease; hydrolas 24.2 66 0.0023 25.0 3.6 34 317-365 5-38 (104)
70 2apr_A Rhizopuspepsin; hydrola 24.0 57 0.0019 30.8 3.9 16 348-363 31-46 (325)
71 3k1w_A Renin; protease, altern 23.8 76 0.0026 30.0 4.8 41 298-363 7-49 (341)
72 3vla_A EDGP; extracellular, in 23.6 49 0.0017 32.6 3.4 45 296-362 6-50 (413)
73 3ec0_A Protease; HIV-2, inhibi 23.2 59 0.002 25.1 3.0 30 317-361 5-34 (99)
74 3psg_A Pepsinogen; hydrolase(a 23.2 63 0.0022 31.2 4.1 16 348-363 72-87 (370)
75 3pvk_A Candidapepsin-2; hydrol 22.8 75 0.0026 30.0 4.6 16 348-363 28-43 (342)
76 2hah_A Protease, retropepsin; 22.8 73 0.0025 25.3 3.6 32 316-363 10-41 (116)
77 1yg9_A Aspartic protease BLA G 22.5 54 0.0019 31.0 3.4 30 316-363 17-46 (330)
78 1htr_B Gastricsin; aspartyl pr 22.4 67 0.0023 30.3 4.1 16 348-363 28-43 (329)
79 2x0b_A Renin; hydrolase-hormon 22.0 70 0.0024 31.1 4.1 16 348-363 77-92 (383)
80 3ka2_A [L-Ala51;Gly51']HIV-1 p 21.2 60 0.0021 28.6 3.1 29 103-134 112-140 (203)
81 3slz_A GAG-Pro-POL polyprotein 20.8 81 0.0028 25.7 3.6 26 323-363 25-50 (132)
82 2bju_A Plasmepsin II; aspartic 20.8 75 0.0026 31.8 4.1 16 348-363 154-169 (453)
No 1
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.3e-59 Score=474.88 Aligned_cols=308 Identities=25% Similarity=0.362 Sum_probs=257.5
Q ss_pred cccccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceecCCC
Q 011566 91 LIKTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNFPNVDPSRIPAFIPKRSSSSQLIGCQN 170 (483)
Q Consensus 91 ~~~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~~~~~~~~~~~f~p~~SsT~~~~~c~~ 170 (483)
....||.++.+..|+++|+||||||+ |.|+|||||+++||+|. .|..| .|..++.|+|++|+||+...|
T Consensus 45 ~~~~~l~n~~d~~Y~~~i~iGTPpQ~-~~v~~DTGSs~lWV~s~---~C~~~-----~C~~~~~y~~~~SsT~~~~~~-- 113 (370)
T 3psg_A 45 IGDEPLENYLDTEYFGTIGIGTPAQD-FTVIFDTGSSNLWVPSV---YCSSL-----ACSDHNQFNPDDSSTFEATSQ-- 113 (370)
T ss_dssp SCCCTTGGGTTCCEEEEEEETTTTEE-EEEEEETTCCCEEEEBT---TCCSG-----GGTTSCCBCGGGCTTCEEEEE--
T ss_pred cceecceeccCCEEEEEEEEcCCCCE-EEEEEeCCCCccEEECC---CCCCc-----ccCCCCCCCCccCcCcEECCc--
Confidence 45678999999999999999999999 99999999999999998 88653 235578999999999998763
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCCcCcCceeeeccccCCC------CCce
Q 011566 171 PKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPSKTVPNFLAGCSILSDR------QPAG 244 (483)
Q Consensus 171 ~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~~~~~~~~fg~~~~~~~------~~~G 244 (483)
.|.+.||+|++.|.+++|+|+|++..++++.|||+..... ..+|
T Consensus 114 ------------------------------~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~~~~~~~dG 163 (370)
T 3psg_A 114 ------------------------------ELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDG 163 (370)
T ss_dssp ------------------------------EEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSE
T ss_pred ------------------------------EEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeecccccccCCccc
Confidence 8999999999999999999999999999999999986532 3499
Q ss_pred EeecCCCCCCcc----------cc--cccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCCCC
Q 011566 245 IAGFGRSSESLP----------SQ--LGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSSS 312 (483)
Q Consensus 245 IlGLg~~~~S~~----------~Q--l~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~ 312 (483)
|||||++.++.. +| +..++||+||.+. ...+|.|+|||+|+++ +.|++.|+|+..
T Consensus 164 IlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~-----~~~~G~l~fGg~D~~~-y~g~l~~~pv~~------- 230 (370)
T 3psg_A 164 ILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSN-----DDSGSVVLLGGIDSSY-YTGSLNWVPVSV------- 230 (370)
T ss_dssp EEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC----------CEEEEETCCCGGG-BSSCCEEEECSE-------
T ss_pred eeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccC-----CCCCeEEEEEeeChHh-cCCcceeecccc-------
Confidence 999999877632 22 4458999999874 2357899999999999 999999999987
Q ss_pred CCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccCCcc
Q 011566 313 AFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSGLR 392 (483)
Q Consensus 313 ~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 392 (483)
..+|.|.|++|+|+++.+.. .+...+||||||+++++|++++++|.+++++.. ...+.+.+
T Consensus 231 --~~~w~v~l~~i~v~g~~~~~---------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~--------~~~g~~~v 291 (370)
T 3psg_A 231 --EGYWQITLDSITMDGETIAC---------SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASE--------NSDGEMVI 291 (370)
T ss_dssp --ETTEEEEECEEESSSSEEEC---------TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE--------CTTCCEEC
T ss_pred --cceeEEEEeEEEECCEEEec---------CCCceEEEcCCCCcEECCHHHHHHHHHHhCCcc--------cCCCcEEE
Confidence 56899999999999987652 224789999999999999999999998875421 12345778
Q ss_pred CcccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeCCceEEEEEEecCCCCCCCCCCCceeeCccceeeeEEEEeCCC
Q 011566 393 PCFDISGKKSVYLPELILKFKGGAKMALPPENYFALVGNEVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYLEFDLAN 472 (483)
Q Consensus 393 ~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~ 472 (483)
+|... ..+|+|+|+| +|++|+||+++|+.+ ..+.|+..+...+. ....++.||||++|||++|+|||+++
T Consensus 292 ~C~~~-----~~lP~i~f~~-~g~~~~l~~~~yi~~--~~~~C~~~~~~~~~--~~~~~~~~ILG~~Fl~~~y~vfD~~~ 361 (370)
T 3psg_A 292 SCSSI-----DSLPDIVFTI-DGVQYPLSPSAYILQ--DDDSCTSGFEGMDV--PTSSGELWILGDVFIRQYYTVFDRAN 361 (370)
T ss_dssp CGGGG-----GGCCCEEEEE-TTEEEEECHHHHEEE--CSSCEEESEEEECC--CTTSCCEEEECHHHHTTEEEEEETTT
T ss_pred ECCCc-----ccCCcEEEEE-CCEEEEECHHHhccc--CCCEEEEEEEeCCC--CCCCCCcEEeChHHhcceEEEEECCC
Confidence 99876 6789999999 899999999999998 34469988865432 11223469999999999999999999
Q ss_pred CEEEEEeCC
Q 011566 473 DRFGFAKQK 481 (483)
Q Consensus 473 ~~igfa~~~ 481 (483)
+|||||+++
T Consensus 362 ~riGfA~a~ 370 (370)
T 3psg_A 362 NKVGLAPVA 370 (370)
T ss_dssp TEEEEEEBC
T ss_pred CEEEEEEcC
Confidence 999999985
No 2
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.1e-59 Score=476.37 Aligned_cols=309 Identities=23% Similarity=0.369 Sum_probs=256.9
Q ss_pred ccccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCcceec
Q 011566 92 IKTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCV----DCNFPNVDPSRIPAFIPKRSSSSQLIG 167 (483)
Q Consensus 92 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~----~C~~~~~~~~~~~~f~p~~SsT~~~~~ 167 (483)
...||.++.+..|+++|+||||||+ |.|+|||||+++||+|. .|. .|.. ++.|||++|+||+...
T Consensus 51 ~~~~l~n~~~~~Y~~~I~IGTP~Q~-f~vi~DTGSs~lWV~s~---~C~~~~~~C~~-------~~~y~~~~SsT~~~~~ 119 (383)
T 2x0b_A 51 SSVILTNYMDTQYYGEIGIGTPPQT-FKVVFDTGSSNVWVPSS---KCSRLYTACVY-------HKLFDASDSSSYKHNG 119 (383)
T ss_dssp CEEEEEEETTTEEEEEEEETTTTEE-EEEEEETTCCCEEEEBT---TSCTTSHHHHT-------SCCBCGGGCTTCEEEE
T ss_pred ceEeeeecCCCEEEEEEEECCCCcE-EEEEEeCCCCCeEEecc---CCCCCcccccC-------CCCCCCCCCCcEEECC
Confidence 4578888888999999999999999 99999999999999999 885 4743 6899999999999876
Q ss_pred CCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCCcCcCceeeeccccCC------CC
Q 011566 168 CQNPKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPSKTVPNFLAGCSILSD------RQ 241 (483)
Q Consensus 168 c~~~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~~~~~~~~fg~~~~~~------~~ 241 (483)
| .|.+.||+|++.|.+++|+|+|++..++ +.|||+.... ..
T Consensus 120 ~--------------------------------~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~g~~f~~~~ 166 (383)
T 2x0b_A 120 T--------------------------------ELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMPALPFMLAE 166 (383)
T ss_dssp E--------------------------------EEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECCHHHHTTCS
T ss_pred c--------------------------------EEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecCCcccccCC
Confidence 3 8999999999999999999999999999 9999998542 24
Q ss_pred CceEeecCCCCCCc----------ccc--cccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCC
Q 011566 242 PAGIAGFGRSSESL----------PSQ--LGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVG 309 (483)
Q Consensus 242 ~~GIlGLg~~~~S~----------~~Q--l~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~ 309 (483)
.+||||||++.++. .+| +..++||+||.+... .....+|.|+|||+|+++ +.|++.|+|+..
T Consensus 167 ~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~-~~~~~~G~l~fGg~d~~~-y~G~l~~~pv~~---- 240 (383)
T 2x0b_A 167 FDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSE-NSQSLGGQIVLGGSDPQH-YEGNFHYINLIK---- 240 (383)
T ss_dssp SSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC-----CCEEEEESSCCGGG-EEEEEEEEEBSS----
T ss_pred CceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCC-cccCCCcEEEECCcChHH-cCCceEEEEcCC----
Confidence 59999999988764 344 455999999987521 111137999999999998 999999999976
Q ss_pred CCCCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccC
Q 011566 310 SSSAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKS 389 (483)
Q Consensus 310 ~~~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 389 (483)
..||.|.|++|+|+++.+.. .+...+||||||+++++|++++++|.+++.+.. ..+.
T Consensus 241 -----~~~w~v~l~~i~v~~~~~~~---------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~---------~~g~ 297 (383)
T 2x0b_A 241 -----TGVWQIQMKGVSVGSSTLLC---------EDGCLALVDTGASYISGSTSSIEKLMEALGAKK---------RLFD 297 (383)
T ss_dssp -----TTSCEEEECEEEESSCCCBS---------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE---------CSSC
T ss_pred -----CceEEEEEeEEEeCCceEEc---------CCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc---------cCCc
Confidence 57999999999999976421 234789999999999999999999998885421 2345
Q ss_pred CccCcccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeCC--ceEEEEEEecCCCCCCCCCCCceeeCccceeeeEEE
Q 011566 390 GLRPCFDISGKKSVYLPELILKFKGGAKMALPPENYFALVGN--EVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYLE 467 (483)
Q Consensus 390 ~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yvv 467 (483)
+.++|+.. ..+|+|+|+| +|++|+||+++|+++... +..|+..+...+. +...++.||||++|||++|+|
T Consensus 298 ~~v~C~~~-----~~~P~i~f~~-~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~--~~~~~~~~ILGd~Fl~~~y~v 369 (383)
T 2x0b_A 298 YVVKCNEG-----PTLPDISFHL-GGKEYTLTSADYVFQESYSSKKLCTLAIHAMDI--PPPTGPTWALGATFIRKFYTE 369 (383)
T ss_dssp EEEEGGGT-----TTCCCEEEEE-TTEEEEECHHHHBCCCCCCTTSEEEBSEEECCC--CTTTCSCEEECHHHHTTEEEE
T ss_pred EEEecccc-----ccCceEEEEE-CCEEEEECHHHhEeeccCCCCCeEEEEEEeccc--CCCCCCcEEEChHHhcceEEE
Confidence 67899876 6789999999 899999999999987653 4589987765432 112345799999999999999
Q ss_pred EeCCCCEEEEEeCC
Q 011566 468 FDLANDRFGFAKQK 481 (483)
Q Consensus 468 fD~~~~~igfa~~~ 481 (483)
||++|+|||||+++
T Consensus 370 fD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 370 FDRRNNRIGFALAR 383 (383)
T ss_dssp EETTTTEEEEEEEC
T ss_pred EECCCCEEeEEEcC
Confidence 99999999999874
No 3
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-57 Score=458.14 Aligned_cols=310 Identities=26% Similarity=0.382 Sum_probs=255.5
Q ss_pred ccccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCcceecCC
Q 011566 92 IKTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCV--DCNFPNVDPSRIPAFIPKRSSSSQLIGCQ 169 (483)
Q Consensus 92 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~--~C~~~~~~~~~~~~f~p~~SsT~~~~~c~ 169 (483)
...||.++.++.|+++|.||||||+ +.|+|||||+++||+|. .|. .|. .++.|+|++|+||+...|
T Consensus 13 ~~~~l~n~~~~~Y~~~i~iGtP~Q~-~~v~~DTGSs~lWv~~~---~C~~~~C~-------~~~~y~~~~SsT~~~~~~- 80 (351)
T 1tzs_A 13 AKEPLINYLDMEYFGTISIGSPPQN-FTVIFDTGSSNLWVPSV---YCTSPACK-------THSRFQPSQSSTYSQPGQ- 80 (351)
T ss_dssp -CCTTGGGSSSCCCEEEEETTTTEE-EEEEEETTCCCEEEEBT---TCCSGGGT-------TSCCBCGGGCTTCBCCSC-
T ss_pred cceeceecCCCEEEEEEEECCCCeE-EEEEEeCCCcceEEecC---CCCccccC-------CCCcCCcccCcceEECCC-
Confidence 4578888888999999999999999 99999999999999999 886 564 368999999999987653
Q ss_pred CcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCCcCcCceeeeccccCC------CCCc
Q 011566 170 NPKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPSKTVPNFLAGCSILSD------RQPA 243 (483)
Q Consensus 170 ~~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~~~~~~~~fg~~~~~~------~~~~ 243 (483)
.|.+.|++|++.|.+++|+|+|++.+++++.|||+.... ...+
T Consensus 81 -------------------------------~~~i~Yg~Gs~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~ 129 (351)
T 1tzs_A 81 -------------------------------SFSIQYGTGSLSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFD 129 (351)
T ss_dssp -------------------------------EEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCS
T ss_pred -------------------------------EEEEEeCCCCeEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCc
Confidence 899999999999999999999999999999999998642 2349
Q ss_pred eEeecCCCCCCc----------ccc--cccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCCC
Q 011566 244 GIAGFGRSSESL----------PSQ--LGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSS 311 (483)
Q Consensus 244 GIlGLg~~~~S~----------~~Q--l~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~ 311 (483)
||||||++.++. .+| +..++||+||.+.. ....+|.|+|||+|+++ +.|++.|+|+..
T Consensus 130 GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~---~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~------ 199 (351)
T 1tzs_A 130 GILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNP---EGGAGSELIFGGYDHSH-FSGSLNWVPVTK------ 199 (351)
T ss_dssp EEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC-----CTTCEEEETSCCGGG-BCSCCEEEECSE------
T ss_pred eEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCC---CCCCCCEEEECCCCHHH-cCCceEEEecCC------
Confidence 999999987763 233 44589999998742 12247999999999998 999999999986
Q ss_pred CCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccCCc
Q 011566 312 SAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSGL 391 (483)
Q Consensus 312 ~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 391 (483)
..+|.|.|++|+|+++.+.. .....+||||||++++||++++++|++++.+.. .. +.+.
T Consensus 200 ---~~~~~v~l~~i~v~~~~~~~---------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~--------~~-g~~~ 258 (351)
T 1tzs_A 200 ---QAYWQIALDNIQVGGTVMFC---------SEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAP--------VD-GEYA 258 (351)
T ss_dssp ---ETTEEEEEEEEEETTEEEEC---------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE--------CS-SSEE
T ss_pred ---CceEEEEeCEEEECCceEEc---------CCCceEEeccCCcceeCCHHHHHHHHHHhCCcc--------cC-CeEE
Confidence 46899999999999987532 223679999999999999999999998875421 11 4566
Q ss_pred cCcccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeCC--ceEEEEEEecCCCCCCCCCCCceeeCccceeeeEEEEe
Q 011566 392 RPCFDISGKKSVYLPELILKFKGGAKMALPPENYFALVGN--EVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYLEFD 469 (483)
Q Consensus 392 ~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD 469 (483)
++|+.. ..+|+|+|+| +|++|+||+++|+++... ...|++.+...+. .......||||++|||++|+|||
T Consensus 259 ~~C~~~-----~~~P~i~f~f-~g~~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~--~~~~~~~~iLG~~fl~~~y~vfD 330 (351)
T 1tzs_A 259 VECANL-----NVMPDVTFTI-NGVPYTLSPTAYTLLDFVDGMQFCSSGFQGLDI--HPPAGPLWILGDVFIRQFYSVFD 330 (351)
T ss_dssp ECGGGG-----GGSCCEEEEE-TTEEEEECTTTSEECC-----CCEEESEEECCC--CTTTCSCEEECHHHHHHEEEEEE
T ss_pred EeCCCC-----ccCCcEEEEE-CCEEEEECHHHhEeeccCCCCCeEEEEEEECCC--CCCCCCeEEEChHHhhheEEEEE
Confidence 799875 5789999999 899999999999987542 4589987765431 11234579999999999999999
Q ss_pred CCCCEEEEEeCCCC
Q 011566 470 LANDRFGFAKQKCA 483 (483)
Q Consensus 470 ~~~~~igfa~~~C~ 483 (483)
++++|||||+++|.
T Consensus 331 ~~~~rigfA~~~~~ 344 (351)
T 1tzs_A 331 RGNNRVGLAPAVPW 344 (351)
T ss_dssp TTTTEEEEEEBC--
T ss_pred CCCCEEEEEECCcc
Confidence 99999999999984
No 4
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=8.5e-58 Score=467.35 Aligned_cols=349 Identities=25% Similarity=0.467 Sum_probs=274.0
Q ss_pred ccccccc-cCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceecCCC
Q 011566 92 IKTPLSV-HSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNFPNVDPSRIPAFIPKRSSSSQLIGCQN 170 (483)
Q Consensus 92 ~~~~l~~-~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~~~~~~~~~~~f~p~~SsT~~~~~c~~ 170 (483)
+..|+.. ..++.|+++|.||||||+ |.|+|||||+++||+|. +| .+|+||+.++|.+
T Consensus 9 ~~~pv~~d~~~~~Y~~~i~iGTPpq~-~~v~~DTGS~~lWv~c~---~c------------------~~Sst~~~v~C~s 66 (413)
T 3vla_A 9 LVVPVKKDASTLQYVTTINQRTPLVS-ENLVVDLGGRFLWVDCD---QN------------------YVSSTYRPVRCRT 66 (413)
T ss_dssp EEEEEEECTTTCCEEEEEEETTTTEE-EEEEEETTCSSEEEECS---SS------------------CCCTTCEECBTTS
T ss_pred EEEEeeecCCCCeEEEEEEcCCCCcc-eEEEEeCCChhhhcccC---CC------------------CCCCCcCccCCCc
Confidence 3444433 346899999999999999 99999999999999988 55 2599999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCC-CCCCCC-CCCCcceeecc-cee-EEEEEEEEEEEeCC---------cCcCceeeecccc
Q 011566 171 PKCSWIFGPNVESRCKGCSP-RNKTCP-LACPSYLLQYG-LGF-TAGLLLSETLRFPS---------KTVPNFLAGCSIL 237 (483)
Q Consensus 171 ~~c~~~~~~~~~~~c~~c~~-~~~~c~-~~c~~~~~~Yg-~g~-~~G~~~~D~v~~~~---------~~~~~~~fg~~~~ 237 (483)
+.|..... ..|..|.. +...|. ..| .|.+.|+ +|+ +.|++++|+|+|++ ..++++.|||++.
T Consensus 67 ~~C~~~~~----~~~~~c~s~~~~~c~~~~c-~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~ 141 (413)
T 3vla_A 67 SQCSLSGS----IACGDCFNGPRPGCNNNTC-GVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPT 141 (413)
T ss_dssp HHHHHTTC----CEEECCSSCCBTTBCSSEE-EECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECG
T ss_pred cccccccc----CCCcccccCCCCCCCCCcC-cceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECccc
Confidence 99986543 35555532 122343 346 9999995 655 99999999999962 5788999999986
Q ss_pred CC-----CCCceEeecCCCCCCccccccc-----ceeeeecccCcCCCCCCccceEEccCCCCCC----CCCCC-ceeee
Q 011566 238 SD-----RQPAGIAGFGRSSESLPSQLGL-----KKFSYCLLSRKFDDAPVSSNLVLDTGPGSGD----SKTPG-LSYTP 302 (483)
Q Consensus 238 ~~-----~~~~GIlGLg~~~~S~~~Ql~~-----~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~----~~~g~-l~~~p 302 (483)
.. ...+||||||++.+|++.||.. ++||+||.+. ...+|.|+|||+|..+ .+.++ ++|+|
T Consensus 142 ~~~~g~~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~-----~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tP 216 (413)
T 3vla_A 142 SLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGS-----TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTP 216 (413)
T ss_dssp GGGTTSCTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSC-----SSSCEEEEEESCCEEETTTEEECTTTSEEEE
T ss_pred ccccCcccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCC-----CCCceEEEECCCcccccccccccCCceeEee
Confidence 41 2349999999999999999875 8999999873 2357899999998632 15677 99999
Q ss_pred ceeCCCCC-----CCCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhc
Q 011566 303 FYKNPVGS-----SSAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMG 377 (483)
Q Consensus 303 ~~~~~~~~-----~~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~ 377 (483)
+..++..+ +.....+|+|+|++|+||++.+.++++.+.++.++.+++||||||++++||+++|++|+++|.+.+.
T Consensus 217 l~~~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~ 296 (413)
T 3vla_A 217 LLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESA 296 (413)
T ss_dssp CBCCSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHH
T ss_pred cccCCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhc
Confidence 99864210 0001269999999999999999998888877766668899999999999999999999999998764
Q ss_pred --ccCccccccccCCccCcccccCCC----ccccCeEEEEEcC-CcEEEcCCCCceEEeCCceEEEEEEecCCCCCCCCC
Q 011566 378 --NYSRAADVEKKSGLRPCFDISGKK----SVYLPELILKFKG-GAKMALPPENYFALVGNEVLCLILFTDNAAGPALGR 450 (483)
Q Consensus 378 --~~~~~~~~~~~~~~~~C~~~~~~~----~~~~P~i~f~f~g-g~~~~l~~~~y~~~~~~~~~C~~~i~~~~~~~~~~~ 450 (483)
.+++. ....+++.|+..++.. ...+|+|+|+|.| ++.|+|++++|+++..++..|++++.... ..
T Consensus 297 ~~~~~~~---~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~-----~~ 368 (413)
T 3vla_A 297 ARNITRV---ASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGS-----NL 368 (413)
T ss_dssp HTTCCEE---CCCTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEES-----SC
T ss_pred ccCCCcC---CCCCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCC-----Cc
Confidence 22221 1234568999875432 2478999999954 38999999999998766778997765321 12
Q ss_pred CCceeeCccceeeeEEEEeCCCCEEEEEeC
Q 011566 451 GPAIILGDFQLQNFYLEFDLANDRFGFAKQ 480 (483)
Q Consensus 451 ~~~~IlG~~fl~~~yvvfD~~~~~igfa~~ 480 (483)
++.||||+.|||++|+|||++++|||||++
T Consensus 369 ~~~~IlGd~fl~~~~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 369 RTSIVIGGHQLEDNLVQFDLATSRVGFSGT 398 (413)
T ss_dssp SSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ccceeEehhhhcCeEEEEECCCCEEEEEEe
Confidence 357999999999999999999999999985
No 5
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2.8e-57 Score=451.83 Aligned_cols=307 Identities=25% Similarity=0.390 Sum_probs=256.2
Q ss_pred ccccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCcceecCC
Q 011566 92 IKTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVD--CNFPNVDPSRIPAFIPKRSSSSQLIGCQ 169 (483)
Q Consensus 92 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~--C~~~~~~~~~~~~f~p~~SsT~~~~~c~ 169 (483)
..+||.++.++.|+++|+||||||+ +.|+|||||+++||+|. +|.. |.. ++.|+|++|+||+...|
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~-~~v~~DTGSs~lWv~~~---~C~~~~C~~-------~~~y~~~~SsT~~~~~~- 70 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQN-FKVILDTGSSNLWVPSN---ECGSLACFL-------HSKYDHEASSSYKANGT- 70 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEE-EEEEEETTCCCEEEEBT---TCCSHHHHT-------SCCBCGGGCTTCEEEEE-
T ss_pred cceeeeecCCCEEEEEEEECCCCcE-EEEEEeCCCcCeEEecC---CCCCcccCC-------cCcCCcccCcCeEECCc-
Confidence 3467888888999999999999999 99999999999999999 8976 643 67999999999998653
Q ss_pred CcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCCcCcCceeeeccccCC------CCCc
Q 011566 170 NPKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPSKTVPNFLAGCSILSD------RQPA 243 (483)
Q Consensus 170 ~~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~~~~~~~~fg~~~~~~------~~~~ 243 (483)
.|.+.|++|++.|.+++|+|+|++.+++++.|||++... ...+
T Consensus 71 -------------------------------~~~i~Yg~Gs~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~ 119 (329)
T 1dpj_A 71 -------------------------------EFAIQYGTGSLEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFD 119 (329)
T ss_dssp -------------------------------EEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCS
T ss_pred -------------------------------EEEEEECCceEEEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcc
Confidence 899999999999999999999999999999999997542 2359
Q ss_pred eEeecCCCCCCcc----------cc--cccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCCC
Q 011566 244 GIAGFGRSSESLP----------SQ--LGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSS 311 (483)
Q Consensus 244 GIlGLg~~~~S~~----------~Q--l~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~ 311 (483)
||||||+..+++. +| +..++||+||.+... ....+|.|+|||+|+++ +.|++.|+|+..
T Consensus 120 GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~--~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~------ 190 (329)
T 1dpj_A 120 GILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSK--DTENGGEATFGGIDESK-FKGDITWLPVRR------ 190 (329)
T ss_dssp EEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGG--TCSSSEEEEESSCCGGG-EEEEEEEEECSS------
T ss_pred eEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCC--CCCCCcEEEEcCCChhh-cCCceEEEEcCC------
Confidence 9999999887643 33 456899999987421 12246999999999988 999999999975
Q ss_pred CCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccCCc
Q 011566 312 SAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSGL 391 (483)
Q Consensus 312 ~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 391 (483)
..+|.|.|++|+|+++.+.. ....+||||||++++||++++++|++++.+. ....+.+.
T Consensus 191 ---~~~~~v~l~~i~v~~~~~~~----------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~--------~~~~g~~~ 249 (329)
T 1dpj_A 191 ---KAYWEVKFEGIGLGDEYAEL----------ESHGAAIDTGTSLITLPSGLAEMINAEIGAK--------KGWTGQYT 249 (329)
T ss_dssp ---BTTBEEEEEEEEETTEEEEC----------SSCEEEECTTCSCEEECHHHHHHHHHHHTCE--------ECTTSSEE
T ss_pred ---CceEEEEeeeEEECCeEecC----------CCccEEeeCCCCcEECCHHHHHHHHHHhCCc--------cCCCCeEE
Confidence 56899999999999988752 2367999999999999999999999888532 12234556
Q ss_pred cCcccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeCCceEEEEEEecCCCCCCCCCCCceeeCccceeeeEEEEeCC
Q 011566 392 RPCFDISGKKSVYLPELILKFKGGAKMALPPENYFALVGNEVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYLEFDLA 471 (483)
Q Consensus 392 ~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~ 471 (483)
++|... ..+|+|+|+| +|++|+||+++|+++.. ..|++.+...+. +...++.||||++|||++|+|||++
T Consensus 250 ~~C~~~-----~~~P~i~f~f-~g~~~~i~~~~y~~~~~--~~C~~~~~~~~~--~~~~~~~~iLG~~fl~~~y~vfD~~ 319 (329)
T 1dpj_A 250 LDCNTR-----DNLPDLIFNF-NGYNFTIGPYDYTLEVS--GSCISAITPMDF--PEPVGPLAIVGDAFLRKYYSIYDLG 319 (329)
T ss_dssp ECGGGG-----GGCCCEEEEE-TTEEEEECTTTSEEEET--TEEEECEEECCC--CTTTCSEEEECHHHHTTEEEEEETT
T ss_pred EECCCC-----CcCCcEEEEE-CCEEEEECHHHhEecCC--CEEEEEEEeccc--CCCCCCcEEEChHHhcceEEEEECC
Confidence 788765 6789999999 78999999999999874 579987765431 1123467999999999999999999
Q ss_pred CCEEEEEeCC
Q 011566 472 NDRFGFAKQK 481 (483)
Q Consensus 472 ~~~igfa~~~ 481 (483)
++|||||+++
T Consensus 320 ~~~igfA~~~ 329 (329)
T 1dpj_A 320 NNAVGLAKAI 329 (329)
T ss_dssp TTEEEEEEEC
T ss_pred CCEEEEEECC
Confidence 9999999975
No 6
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1e-57 Score=466.99 Aligned_cols=342 Identities=23% Similarity=0.358 Sum_probs=258.3
Q ss_pred ccccccc-ccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceecCC
Q 011566 91 LIKTPLS-VHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNFPNVDPSRIPAFIPKRSSSSQLIGCQ 169 (483)
Q Consensus 91 ~~~~~l~-~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~~~~~~~~~~~f~p~~SsT~~~~~c~ 169 (483)
....||. ++.++.|+++|.||||||+ +.|+|||||+++||+|. +| .+|+||+.+.|.
T Consensus 9 ~~~~pl~~~~~~~~Y~~~i~iGTP~Q~-~~v~~DTGSs~lWv~~~---~~------------------~~Sst~~~~~C~ 66 (403)
T 3aup_A 9 LVVLPVQNDGSTGLHWANLQKRTPLMQ-VPVLVDLNGNHLWVNCE---QQ------------------YSSKTYQAPFCH 66 (403)
T ss_dssp CEEEEEEECTTTCCEEEEEEETTTTEE-EEEEEETTCSSEEEECS---SC------------------CCCSSCBCCCTT
T ss_pred cEEEeeecCCCCceEEEEEECCCCCce-eEEEEECCCCceeECCC---CC------------------CCCCCCCccCCC
Confidence 3567777 6677999999999999999 99999999999999888 43 269999999999
Q ss_pred CcCCCCCCCCCCCCCCCCCCCC-CCCCC-CCCCcceeecc-cee-EEEEEEEEEEEeCC-----------cCcCceeeec
Q 011566 170 NPKCSWIFGPNVESRCKGCSPR-NKTCP-LACPSYLLQYG-LGF-TAGLLLSETLRFPS-----------KTVPNFLAGC 234 (483)
Q Consensus 170 ~~~c~~~~~~~~~~~c~~c~~~-~~~c~-~~c~~~~~~Yg-~g~-~~G~~~~D~v~~~~-----------~~~~~~~fg~ 234 (483)
+..|..... ..|..|..+ ...|. ..| .|.+.|+ +|+ +.|.+++|+|+|++ .+++++.|||
T Consensus 67 s~~C~~~~~----~~c~~c~~~~~s~~~~~~~-~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~ 141 (403)
T 3aup_A 67 STQCSRANT----HQCLSCPAASRPGCHKNTC-GLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSC 141 (403)
T ss_dssp BHHHHHTTC----CCEEECSSSCBTTBCSSEE-EEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEE
T ss_pred CccccCccc----cCccccCCCCCCCCCCCcc-eeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEEC
Confidence 999986542 235444321 12232 345 9999998 555 99999999999987 6888999999
Q ss_pred cccCC------CCCceEeecCCCCCCccccccc-----ceeeeecccCcCCCCCCccceEEccCCCCCCCC--C-C----
Q 011566 235 SILSD------RQPAGIAGFGRSSESLPSQLGL-----KKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSK--T-P---- 296 (483)
Q Consensus 235 ~~~~~------~~~~GIlGLg~~~~S~~~Ql~~-----~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~--~-g---- 296 (483)
++... ...+||||||++.+|++.|++. ++||+||.+. ...+|.|+||| |+++ + . |
T Consensus 142 ~~~~~~~~~~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~-----~~~~G~l~fGg-d~~~-~~~~~G~~~~ 214 (403)
T 3aup_A 142 APSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRY-----PTSKGAIIFGD-APNN-MRQFQNQDIF 214 (403)
T ss_dssp ECGGGGSSSSSTTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSC-----TTSCEEEEESC-HHHH-C--CTTCCTT
T ss_pred CcccccccCCCCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCC-----CCCCeeEEECC-Cchh-cccccccccc
Confidence 98641 2349999999999999988753 8999999873 23578999999 8877 6 4 5
Q ss_pred -CceeeeceeCCCCCCCCCCcceeEEeeEEEECcEEe-eeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHH
Q 011566 297 -GLSYTPFYKNPVGSSSAFGEFYYVGLRQIIVGSKHV-KIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIR 374 (483)
Q Consensus 297 -~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~vg~~~~-~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~ 374 (483)
++.|+|+...+ ..+|.|.|++|+|+++.+ .++...+.++..+.+++||||||++++||+++|++|+++|.+
T Consensus 215 ~~l~~~Pl~~~~-------~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~ 287 (403)
T 3aup_A 215 HDLAFTPLTITL-------QGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQ 287 (403)
T ss_dssp TTEEEEECEECT-------TSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHH
T ss_pred CceeecccccCC-------CCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHH
Confidence 89999999864 368999999999999998 777666655555667899999999999999999999999987
Q ss_pred HhcccCccccccccCCccCcccccCCCccccCeEEEEEcCC--cEEEcCCCCceEEeCCceEEEEEEecCCCCCCCCCCC
Q 011566 375 QMGNYSRAADVEKKSGLRPCFDISGKKSVYLPELILKFKGG--AKMALPPENYFALVGNEVLCLILFTDNAAGPALGRGP 452 (483)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg--~~~~l~~~~y~~~~~~~~~C~~~i~~~~~~~~~~~~~ 452 (483)
.+..+.+........+.++|... ..+|+|+|+|.|+ ++|+|++++|+++..++..|+++. ..+. ...+
T Consensus 288 ~~~~~~~~~~~~~~~~c~~c~~~-----~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~~~~C~~~~-~~~~----~~~~ 357 (403)
T 3aup_A 288 QLPKQAQVKSVAPFGLCFNSNKI-----NAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVM-NGGM----QPRA 357 (403)
T ss_dssp TSCGGGEECCCTTCSCEECGGGC-----CCCCCEEEEESSTTCCEEEECHHHHEEEC---CEEECEE-ECCS----CCSS
T ss_pred HhccccccCCCCCCCceEECCCc-----CcCCcEEEEEcCCCceEEEEcccceEEEcCCCeEEEEEE-cCCC----CCCC
Confidence 65433222111112223344432 4789999999544 599999999999876567899544 3221 1235
Q ss_pred ceeeCccceeeeEEEEeCCCCEEEE-------EeCCCC
Q 011566 453 AIILGDFQLQNFYLEFDLANDRFGF-------AKQKCA 483 (483)
Q Consensus 453 ~~IlG~~fl~~~yvvfD~~~~~igf-------a~~~C~ 483 (483)
.||||+.|||++|+|||++++|||| ++++|+
T Consensus 358 ~~ILG~~fl~~~yvvfD~~~~rIGf~A~~~~~~~~~C~ 395 (403)
T 3aup_A 358 EITLGARQLEENLVVFDLARSRVGFSTSSLHSHGVKCA 395 (403)
T ss_dssp SEEECHHHHTTSCEEEETTTTEEEEESSCGGGGTCCGG
T ss_pred cEEEChHHhcCeEEEEECCCCEEEEecccccccCCCcc
Confidence 7999999999999999999999999 777774
No 7
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=9.6e-58 Score=453.88 Aligned_cols=299 Identities=22% Similarity=0.346 Sum_probs=252.5
Q ss_pred cccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCcceecCCC
Q 011566 93 KTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRC--VDCNFPNVDPSRIPAFIPKRSSSSQLIGCQN 170 (483)
Q Consensus 93 ~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C--~~C~~~~~~~~~~~~f~p~~SsT~~~~~c~~ 170 (483)
..+|.++.++.|+++|+||||||+ +.|+|||||+++||+|. +| ..|.. ++.|+|++|+||+...|
T Consensus 5 ~~~l~n~~~~~Y~~~i~iGtP~q~-~~v~~DTGSs~~Wv~~~---~C~~~~C~~-------~~~y~~~~SsT~~~~~~-- 71 (323)
T 3cms_A 5 SVPLTNYLDSQYFGKIYLGTPPQE-FTVLFDTGSSDFWVPSI---YCKSNACKN-------HQRFDPRKSSTFQNLGK-- 71 (323)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEE-EEEEEETTCCCEEEEBT---TCCSHHHHT-------SCCBCGGGCTTCEEEEE--
T ss_pred eeeeEeccCCEEEEEEEECCCCeE-EEEEEeCCccceEEcCC---CCCcccccC-------CCCCCCccCCCeEECCc--
Confidence 467888888999999999999999 99999999999999999 88 45743 68999999999998764
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCCcCcCceeeeccccCC------CCCce
Q 011566 171 PKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPSKTVPNFLAGCSILSD------RQPAG 244 (483)
Q Consensus 171 ~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~~~~~~~~fg~~~~~~------~~~~G 244 (483)
.|.+.|++|++.|.+++|+|+|++.+++++.|||++... ...+|
T Consensus 72 ------------------------------~~~i~Yg~Gs~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~G 121 (323)
T 3cms_A 72 ------------------------------PLSIHYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDG 121 (323)
T ss_dssp ------------------------------EEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSE
T ss_pred ------------------------------EEEEEeCCCCeEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCce
Confidence 899999999999999999999999999999999998653 24599
Q ss_pred EeecCCCCCCcc----------cc--cccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCCCC
Q 011566 245 IAGFGRSSESLP----------SQ--LGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSSS 312 (483)
Q Consensus 245 IlGLg~~~~S~~----------~Q--l~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~ 312 (483)
|||||++.++.. +| +..++||+||.+.. ..|.|+|||+|+++ +.|++.|+|+..
T Consensus 122 ilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~------~~G~l~fGg~d~~~-~~g~l~~~p~~~------- 187 (323)
T 3cms_A 122 ILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNG------QESMLTLGAIDPSY-YTGSLHWVPVTV------- 187 (323)
T ss_dssp EEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTS------SCEEEEESCCCGGG-EEEEEEEEECSS-------
T ss_pred EEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCC------CCEEEEECCCChhh-ccCceEEEECcc-------
Confidence 999999876632 33 44589999998741 13999999999988 999999999976
Q ss_pred CCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccCCcc
Q 011566 313 AFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSGLR 392 (483)
Q Consensus 313 ~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 392 (483)
..+|.|.|++|+|+++.+..+ ....+||||||++++||++++++|++++.+.. ...+.+.+
T Consensus 188 --~~~~~v~l~~i~v~~~~~~~~---------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~--------~~~g~~~~ 248 (323)
T 3cms_A 188 --QQYWQFTVDSVTISGVVVACE---------GGCQAILDTGTSKLVGPSSDILNIQQAIGATQ--------NQYGEFDI 248 (323)
T ss_dssp --BTTBEEEEEEEEETTEEEEST---------TCEEEEECTTCCSEEECHHHHHHHHHHHTCEE--------ETTTEEEE
T ss_pred --CCeEEEEEeeEEECCEEeecC---------CCcEEEEecCCccEeCCHHHHHHHHHHhCCee--------cCCCcEEE
Confidence 468999999999999887532 23679999999999999999999998885421 12244567
Q ss_pred CcccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeCCceEEEEEEecCCCCCCCCCCCceeeCccceeeeEEEEeCCC
Q 011566 393 PCFDISGKKSVYLPELILKFKGGAKMALPPENYFALVGNEVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYLEFDLAN 472 (483)
Q Consensus 393 ~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~ 472 (483)
+|+.. ..+|+|+|+| +|++|+||+++|+++ .+..|+..+...+ .+..||||++|||++|+|||+++
T Consensus 249 ~C~~~-----~~~P~i~f~f-~g~~~~i~~~~y~~~--~~~~C~~~i~~~~------~~~~~iLG~~fl~~~y~vfD~~~ 314 (323)
T 3cms_A 249 DCDNL-----SYMPTVVFEI-NGKMYPLTPSAYTSQ--DQGFCTSGFQSEN------HSQKWILGDVFIREYYSVFDRAN 314 (323)
T ss_dssp CTTCT-----TTSCCEEEEE-TTEEEEECHHHHEEE--ETTEEEESEEEC---------CCEEECHHHHTTEEEEEETTT
T ss_pred ECCCC-----ccCceEEEEE-CCEEEEECHHHhccC--CCCEEEEEEEeCC------CCCcEEECHHHhhceEEEEECCC
Confidence 89865 5789999999 899999999999998 3568998776432 23579999999999999999999
Q ss_pred CEEEEEeCC
Q 011566 473 DRFGFAKQK 481 (483)
Q Consensus 473 ~~igfa~~~ 481 (483)
+|||||+++
T Consensus 315 ~~igfA~~~ 323 (323)
T 3cms_A 315 NLVGLAKAI 323 (323)
T ss_dssp TEEEEEEEC
T ss_pred CEEEEEECC
Confidence 999999975
No 8
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=4.7e-57 Score=449.18 Aligned_cols=302 Identities=25% Similarity=0.406 Sum_probs=255.1
Q ss_pred cccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCcceecCCC
Q 011566 93 KTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCV--DCNFPNVDPSRIPAFIPKRSSSSQLIGCQN 170 (483)
Q Consensus 93 ~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~--~C~~~~~~~~~~~~f~p~~SsT~~~~~c~~ 170 (483)
..||.++.++.|+++|.||||||+ +.|+|||||+++||+|. .|. .|. .++.|+|++|+||+...|
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~-~~v~~DTGSs~~Wv~~~---~C~~~~C~-------~~~~y~~~~SsT~~~~~~-- 69 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPES-FKVIFDTGSSNLWVSSS---HCSAQACS-------NHNKFKPRQSSTYVETGK-- 69 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEE-EEEEEETTCCCEEECBT---TCCSHHHH-------TSCCBCGGGCTTCEEEEE--
T ss_pred eeeeecCCCCEEEEEEEECCCCeE-EEEEEeCCCcceEEecC---CCCccccc-------CCCcCCCccCCCeEeCCc--
Confidence 467888788999999999999999 99999999999999998 886 364 368999999999998763
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCCcCcCceeeeccccCC------CCCce
Q 011566 171 PKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPSKTVPNFLAGCSILSD------RQPAG 244 (483)
Q Consensus 171 ~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~~~~~~~~fg~~~~~~------~~~~G 244 (483)
.|.+.|++|++.|.+++|+|+|++.+++++.|||+.... ...+|
T Consensus 70 ------------------------------~~~i~Yg~Gs~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~G 119 (324)
T 1am5_A 70 ------------------------------TVDLTYGTGGMRGILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDG 119 (324)
T ss_dssp ------------------------------EEEEECSSCEEEEEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSE
T ss_pred ------------------------------EEEEEECCCCeEEEEEECceeECCcEEcccEEEEEEecccccccCCCCce
Confidence 899999999999999999999999999999999998542 23499
Q ss_pred EeecCCCCCCcc----------cc--cccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCCCC
Q 011566 245 IAGFGRSSESLP----------SQ--LGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSSS 312 (483)
Q Consensus 245 IlGLg~~~~S~~----------~Q--l~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~ 312 (483)
|||||++.++.. +| +..++||+||.+. ...+|.|+|||+|+++ +.|++.|+|+..
T Consensus 120 ilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~-----~~~~G~l~fGg~d~~~-~~g~l~~~p~~~------- 186 (324)
T 1am5_A 120 ILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGG-----GANGSEVMLGGVDNSH-YTGSIHWIPVTA------- 186 (324)
T ss_dssp EEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCST-----TCSCEEEEESSCCGGG-BCSCCEEEEEEE-------
T ss_pred EEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCC-----CCCCcEEEECccCHHH-cCCceEEEecCC-------
Confidence 999999877643 22 4458999999874 1247999999999998 999999999986
Q ss_pred CCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccCCcc
Q 011566 313 AFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSGLR 392 (483)
Q Consensus 313 ~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 392 (483)
..+|.|.|++|+|+++.+.. .+ ..+||||||++++||++++++|++++.+. . ..+.+.+
T Consensus 187 --~~~~~v~l~~i~v~~~~~~~---------~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~--------~~g~~~~ 245 (324)
T 1am5_A 187 --EKYWQVALDGITVNGQTAAC---------EG-CQAIVDTGTSKIVAPVSALANIMKDIGAS-E--------NQGEMMG 245 (324)
T ss_dssp --ETTEEEEECEEEETTEECCC---------CC-EEEEECTTCSSEEECTTTHHHHHHHHTCE-E--------CCCCEEC
T ss_pred --CcEEEEEEeEEEECCceeec---------cC-ceEEEecCCccEECCHHHHHHHHHHhCCc-c--------cCCcEEE
Confidence 46899999999999987531 22 67999999999999999999999887543 1 2245678
Q ss_pred CcccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeCCceEEEEEEecCCCCCCCCCCCceeeCccceeeeEEEEeCCC
Q 011566 393 PCFDISGKKSVYLPELILKFKGGAKMALPPENYFALVGNEVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYLEFDLAN 472 (483)
Q Consensus 393 ~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~ 472 (483)
+|+.. ..+|+|+|+| +|++|+||+++|+.+. +..|+..+...+. +....+.||||++|||++|+|||+++
T Consensus 246 ~C~~~-----~~~P~i~f~f-~g~~~~i~~~~y~~~~--~~~C~~~~~~~~~--~~~~~~~~ilG~~fl~~~y~vfD~~~ 315 (324)
T 1am5_A 246 NCASV-----QSLPDITFTI-NGVKQPLPPSAYIEGD--QAFCTSGLGSSGV--PSNTSELWIFGDVFLRNYYTIYDRTN 315 (324)
T ss_dssp CTTSS-----SSSCCEEEEE-TTEEEEECHHHHEEES--SSCEEECEEECCS--CCSSSCEEEECHHHHHHEEEEEETTT
T ss_pred eCCCc-----ccCCcEEEEE-CCEEEEECHHHhcccC--CCeEEEEEEECcc--CCCCCCcEEEChHHhccEEEEEECCC
Confidence 89865 5789999999 8999999999999986 5689987765431 11234579999999999999999999
Q ss_pred CEEEEEeCC
Q 011566 473 DRFGFAKQK 481 (483)
Q Consensus 473 ~~igfa~~~ 481 (483)
+|||||+++
T Consensus 316 ~~igfa~a~ 324 (324)
T 1am5_A 316 NKVGFAPAA 324 (324)
T ss_dssp TEEEEEEBC
T ss_pred CEEEEEECC
Confidence 999999975
No 9
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=2.3e-57 Score=450.87 Aligned_cols=298 Identities=23% Similarity=0.354 Sum_probs=250.2
Q ss_pred ccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCcceecCCCc
Q 011566 94 TPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVD--CNFPNVDPSRIPAFIPKRSSSSQLIGCQNP 171 (483)
Q Consensus 94 ~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~--C~~~~~~~~~~~~f~p~~SsT~~~~~c~~~ 171 (483)
.||.++.+..|+++|+||||||+ ++|+|||||+++||+|. +|.. |. .++.|+|++|+||+...|
T Consensus 3 ~~l~n~~d~~Y~~~i~iGtP~Q~-~~v~~DTGSs~~Wv~~~---~C~~~~C~-------~~~~y~~~~SsT~~~~~~--- 68 (320)
T 4aa9_A 3 EPLTSYLDSQYFGKIYIGTPPQE-FTVVFDTGSSDLWVPSI---YCKSNVCK-------NHHRFDPRKSSTFRNLGK--- 68 (320)
T ss_dssp -----CCCCCCEEEEEETTTTEE-EEEEEETTCCCEEEEBT---TCCSHHHH-------TSCCBCGGGCTTCEEEEE---
T ss_pred ccceeccCCEEEEEEEECCCCeE-EEEEEeCCCCceEEcCC---CCCccccC-------CCCCCCCCCCcCeEcCCc---
Confidence 47888888999999999999999 99999999999999999 8874 53 468999999999998764
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCCcCcCceeeeccccCCC------CCceE
Q 011566 172 KCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPSKTVPNFLAGCSILSDR------QPAGI 245 (483)
Q Consensus 172 ~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~~~~~~~~fg~~~~~~~------~~~GI 245 (483)
.|.+.|++|++.|.+++|+|+|++.+++++.|||+..... ..+||
T Consensus 69 -----------------------------~~~i~Yg~gs~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~Gi 119 (320)
T 4aa9_A 69 -----------------------------PLSIHYGTGSMEGFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGI 119 (320)
T ss_dssp -----------------------------EEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEE
T ss_pred -----------------------------EEEEEECCcEEEEEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccE
Confidence 8999999999999999999999999999999999985432 34999
Q ss_pred eecCCCCCCc------c----cc--cccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCCCCC
Q 011566 246 AGFGRSSESL------P----SQ--LGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSSSA 313 (483)
Q Consensus 246 lGLg~~~~S~------~----~Q--l~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~ 313 (483)
||||++.++. . +| +..++||+||.+. ..+|.|+|||+|+++ +.|+++|+|+..
T Consensus 120 lGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~------~~~G~l~fGg~d~~~-~~g~l~~~p~~~-------- 184 (320)
T 4aa9_A 120 LGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRN------GQGSMLTLGAIDPSY-YTGSLHWVPVTL-------- 184 (320)
T ss_dssp EECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSS------SSCCEEEETCCCGGG-EEEEEEEEECSS--------
T ss_pred EecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCC------CCCeEEEEcccCHHH-ccCceEEEEccc--------
Confidence 9999977553 2 22 4458999999873 357899999999999 999999999975
Q ss_pred CCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccCCccC
Q 011566 314 FGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSGLRP 393 (483)
Q Consensus 314 ~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (483)
..+|.|.+++|+|+++.+..+ ....+||||||++++||++++++|++++.+.. ...+.+.++
T Consensus 185 -~~~w~v~l~~i~v~~~~~~~~---------~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~--------~~~g~~~~~ 246 (320)
T 4aa9_A 185 -QQYWQFTVDSVTINGVAVACV---------GGCQAILDTGTSVLFGPSSDILKIQMAIGATE--------NRYGEFDVN 246 (320)
T ss_dssp -BTTBEEEECEEEETTEEEEST---------TCEEEEECTTCSSEEEEHHHHHHHHHHTTCEE--------CTTSCEEEC
T ss_pred -CCceEEEEeEEEECCEEeccC---------CCcEEEEECCCCcEECCHHHHHHHHHHhCCcc--------cCCCcEEEe
Confidence 578999999999999887632 23679999999999999999999998874421 123566789
Q ss_pred cccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeCCceEEEEEEecCCCCCCCCCCCceeeCccceeeeEEEEeCCCC
Q 011566 394 CFDISGKKSVYLPELILKFKGGAKMALPPENYFALVGNEVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYLEFDLAND 473 (483)
Q Consensus 394 C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~ 473 (483)
|+.. ..+|+|+|+| +|++|+||+++|+.+. +..|+..+.... .++.||||++|||++|+|||++++
T Consensus 247 C~~~-----~~~p~i~f~f-~g~~~~l~~~~y~~~~--~~~C~~~i~~~~------~~~~~ilG~~fl~~~y~vfD~~~~ 312 (320)
T 4aa9_A 247 CGNL-----RSMPTVVFEI-NGRDYPLSPSAYTSKD--QGFCTSGFQGDN------NSELWILGDVFIREYYSVFDRANN 312 (320)
T ss_dssp GGGG-----GGCCCEEEEE-TTEEEEECHHHHEEEE--TTEEEESEEEET------TCCCEEECHHHHTTEEEEEETTTT
T ss_pred CCCC-----CcCceEEEEE-CCEEEEECHHHhccCC--CCeEEEEEEcCC------CCCcEEEChHHhcceEEEEECCCC
Confidence 9875 6789999999 8999999999999763 468998776421 235699999999999999999999
Q ss_pred EEEEEeCC
Q 011566 474 RFGFAKQK 481 (483)
Q Consensus 474 ~igfa~~~ 481 (483)
|||||+++
T Consensus 313 ~igfA~a~ 320 (320)
T 4aa9_A 313 RVGLAKAI 320 (320)
T ss_dssp EEEEEEEC
T ss_pred EEEEEecC
Confidence 99999985
No 10
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.2e-56 Score=466.07 Aligned_cols=319 Identities=24% Similarity=0.345 Sum_probs=256.9
Q ss_pred cccccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCcceec
Q 011566 91 LIKTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCV---DCNFPNVDPSRIPAFIPKRSSSSQLIG 167 (483)
Q Consensus 91 ~~~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~---~C~~~~~~~~~~~~f~p~~SsT~~~~~ 167 (483)
...++|.++.++.|+++|+||||||+ |.|+|||||+++||+|. .|. .|. .++.|+|++|+||+...
T Consensus 41 ~~~~~l~n~~~~~Y~~~i~IGTP~Q~-~~v~~DTGSs~lWV~~~---~C~~~~~C~-------~~~~y~~~~SsT~~~~~ 109 (478)
T 1qdm_A 41 GDIVALKNYMNAQYFGEIGVGTPPQK-FTVIFDTGSSNLWVPSA---KCYFSIACY-------LHSRYKAGASSTYKKNG 109 (478)
T ss_dssp SCSGGGCCGGGCCEEEEEEETTTTEE-EEEEEETTCCCCEEEBT---TCCSCGGGG-------GSCCBCGGGCTTCBCCC
T ss_pred CceEEeEeccCCEEEEEEEECCCCeE-EEEEEcCCCcceEEecC---CCCCCcccc-------CCCCCCcccCCCeeeCC
Confidence 34578888888999999999999999 99999999999999998 885 464 36899999999998755
Q ss_pred CCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCCcCcCceeeeccccCC------CC
Q 011566 168 CQNPKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPSKTVPNFLAGCSILSD------RQ 241 (483)
Q Consensus 168 c~~~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~~~~~~~~fg~~~~~~------~~ 241 (483)
| .|.+.||+|++.|.+++|+|+|++.+++++.|||+.... ..
T Consensus 110 ~--------------------------------~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f~~~~ 157 (478)
T 1qdm_A 110 K--------------------------------PAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAK 157 (478)
T ss_dssp C--------------------------------EEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHHHHCS
T ss_pred c--------------------------------EEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCccccccc
Confidence 2 899999999999999999999999999999999987542 23
Q ss_pred CceEeecCCCCCCc----------ccc--cccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCC
Q 011566 242 PAGIAGFGRSSESL----------PSQ--LGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVG 309 (483)
Q Consensus 242 ~~GIlGLg~~~~S~----------~~Q--l~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~ 309 (483)
.+||||||++.+++ .+| +..++||+||.++. ....+|.|+|||+|+++ +.|++.|+|+..
T Consensus 158 ~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~---~~~~~G~l~fGg~d~~~-~~G~l~~~pv~~---- 229 (478)
T 1qdm_A 158 FDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHV---DEGEGGEIIFGGMDPKH-YVGEHTYVPVTQ---- 229 (478)
T ss_dssp SSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC--------CEEEEETCCCTTS-EEEEEEEEEEEE----
T ss_pred ccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCC---CCCCCeEEEeCCcCHhh-cCCCceEEeccC----
Confidence 49999999988774 334 44589999998741 12357899999999998 999999999986
Q ss_pred CCCCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHh-------------
Q 011566 310 SSSAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQM------------- 376 (483)
Q Consensus 310 ~~~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~------------- 376 (483)
..||.|.|++|+|+++.+.+. .+...+||||||+++++|++++++|.++|.+..
T Consensus 230 -----~~~w~v~l~~i~v~g~~~~~~--------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~y 296 (478)
T 1qdm_A 230 -----KGYWQFDMGDVLVGGKSTGFC--------AGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQY 296 (478)
T ss_dssp -----ETTEEEEECCEEETTEECSTT--------TTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHT
T ss_pred -----CCeEEEEEeEEEECCEEEeec--------CCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhh
Confidence 569999999999999886542 223689999999999999999999998885320
Q ss_pred ---------cccCc--------------c---------------------------------------------------
Q 011566 377 ---------GNYSR--------------A--------------------------------------------------- 382 (483)
Q Consensus 377 ---------~~~~~--------------~--------------------------------------------------- 382 (483)
.+... .
T Consensus 297 g~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~ 376 (478)
T 1qdm_A 297 GQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLIL 376 (478)
T ss_dssp HHHHHHHHHTTCCHHHHHHHTTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred hhHHHHhhhhccChhhhhccccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHH
Confidence 00000 0
Q ss_pred ---------ccccccCCccCcccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeCC--ceEEEEEEecCCCCCCCCCC
Q 011566 383 ---------ADVEKKSGLRPCFDISGKKSVYLPELILKFKGGAKMALPPENYFALVGN--EVLCLILFTDNAAGPALGRG 451 (483)
Q Consensus 383 ---------~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~C~~~i~~~~~~~~~~~~ 451 (483)
.+...+.+.++|... ..+|+|+|+| ||+.|+|+|++|++.... ...|++.+...+. +...+
T Consensus 377 ~~~~~~C~~~~~~~g~~~v~C~~~-----~~lP~i~f~~-gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~--~~~~~ 448 (478)
T 1qdm_A 377 DYVNQLCNRLPSPMGESAVDCGSL-----GSMPDIEFTI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMDI--PPPRG 448 (478)
T ss_dssp HHHHHHTTCBCCSSSCCEECGGGG-----TTCCCEEEEE-TTEEEEECHHHHEEECSCGGGCCEEESEEECCC--CTTSC
T ss_pred HHHHHHhhccCCCCCeEEeecccc-----cccccEEEEE-CCEEEEEChHHhEEEccCCCCCeEEEEEEeccC--CCCCC
Confidence 001123456777654 6789999999 899999999999998654 3589997765432 12234
Q ss_pred CceeeCccceeeeEEEEeCCCCEEEEEeCC
Q 011566 452 PAIILGDFQLQNFYLEFDLANDRFGFAKQK 481 (483)
Q Consensus 452 ~~~IlG~~fl~~~yvvfD~~~~~igfa~~~ 481 (483)
+.||||+.|||++|+|||++|+|||||++.
T Consensus 449 ~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 449 PLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp SEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 689999999999999999999999999873
No 11
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=6.1e-57 Score=455.04 Aligned_cols=309 Identities=20% Similarity=0.287 Sum_probs=259.2
Q ss_pred ccccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCcceecC
Q 011566 92 IKTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCV---DCNFPNVDPSRIPAFIPKRSSSSQLIGC 168 (483)
Q Consensus 92 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~---~C~~~~~~~~~~~~f~p~~SsT~~~~~c 168 (483)
...||.++.++.|+++|.||||||+ +.|+|||||+++||+|. +|. .|.. ++.|+|++|+||+...|
T Consensus 8 ~~~~l~~~~~~~Y~~~i~iGtP~q~-~~v~~DTGSs~~Wv~~~---~C~~~~~C~~-------~~~y~~~~SsT~~~~~~ 76 (361)
T 1mpp_A 8 DTPGLYDFDLEEYAIPVSIGTPGQD-FYLLFDTGSSDTWVPHK---GCDNSEGCVG-------KRFFDPSSSSTFKETDY 76 (361)
T ss_dssp EEEEEEETTTTEEEEEEEETTTTEE-EEEEEETTCCCCEEEBT---TCCGGGTCCS-------SCCBCGGGCTTCEEEEE
T ss_pred ceEEeecCCCCEEEEEEEECCCCcE-EEEEEcCCCCCeEECCC---CCCCCccCCC-------CCcCCCccCCceEecCC
Confidence 4578888888999999999999999 99999999999999999 897 6754 68999999999998764
Q ss_pred CCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCCcCcCceeeeccccCCC--------
Q 011566 169 QNPKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPSKTVPNFLAGCSILSDR-------- 240 (483)
Q Consensus 169 ~~~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~~~~~~~~fg~~~~~~~-------- 240 (483)
.|.+.|++|++.|.+++|+|+|++.+++++.|||++....
T Consensus 77 --------------------------------~~~i~Yg~Gs~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~ 124 (361)
T 1mpp_A 77 --------------------------------NLNITYGTGGANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPD 124 (361)
T ss_dssp --------------------------------EEEEECSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTT
T ss_pred --------------------------------eEEEEECCceEEEEEEEEEEEECCEEEeceEEEEEEeccCcccccccc
Confidence 8999999999999999999999999999999999885422
Q ss_pred ---CCceEeecCCCCCCccc----------------c--cccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCce
Q 011566 241 ---QPAGIAGFGRSSESLPS----------------Q--LGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLS 299 (483)
Q Consensus 241 ---~~~GIlGLg~~~~S~~~----------------Q--l~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~ 299 (483)
..+||||||++.++... | +..++||+||.+. ...|.|+|||+|+++ +.|+++
T Consensus 125 ~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~------~~~G~l~fGg~d~~~-~~g~l~ 197 (361)
T 1mpp_A 125 SELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN------DGGGQVVFGGVNNTL-LGGDIQ 197 (361)
T ss_dssp CSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS------SSEEEEEESSCCGGG-BSSCCE
T ss_pred ccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCC------CCCcEEEEecCChhh-cCCceE
Confidence 34999999998766432 3 4458999999873 257899999999998 999999
Q ss_pred eeeceeCCCCCCCCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeE-EcccccceecCHHHHHHHHHHHHHHhcc
Q 011566 300 YTPFYKNPVGSSSAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVI-VDSGSTFTFMEGPLFEAVAKEFIRQMGN 378 (483)
Q Consensus 300 ~~p~~~~~~~~~~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~i-iDSGTt~~~lp~~~~~~l~~~~~~~~~~ 378 (483)
|+|+...... ..+|.|.|++|+|+++.+..+ ....+| |||||++++||++++++|++++.+...
T Consensus 198 ~~p~~~~~~~-----~~~~~v~l~~i~v~~~~~~~~---------~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~- 262 (361)
T 1mpp_A 198 YTDVLKSRGG-----YFFWDAPVTGVKIDGSDAVSF---------DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT- 262 (361)
T ss_dssp EEECEEETTE-----EEEEEEEEEEEEETTEEEEEE---------EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE-
T ss_pred EEEcccCCCc-----eeEEEEEEeEEEECCeeeccC---------CCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc-
Confidence 9999874311 238999999999999886431 125799 999999999999999999998865421
Q ss_pred cCccccccccCCccCcccccCCCcccc-CeEEEEEc-C-----CcEEEcCCCCceEEeCC-ceEEEEEEecCCCCCCCCC
Q 011566 379 YSRAADVEKKSGLRPCFDISGKKSVYL-PELILKFK-G-----GAKMALPPENYFALVGN-EVLCLILFTDNAAGPALGR 450 (483)
Q Consensus 379 ~~~~~~~~~~~~~~~C~~~~~~~~~~~-P~i~f~f~-g-----g~~~~l~~~~y~~~~~~-~~~C~~~i~~~~~~~~~~~ 450 (483)
...+.+.++|+.. ..+ |+|+|+|. + |++|+||+++|+++... ...|+..+... .
T Consensus 263 ------~~~g~~~~~C~~~-----~~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~-------~ 324 (361)
T 1mpp_A 263 ------ESQQGYTVPCSKY-----QDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPD-------G 324 (361)
T ss_dssp ------EETTEEEEEHHHH-----TTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEE-------S
T ss_pred ------CCCCcEEEECCCc-----ccCCCcEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeC-------C
Confidence 2234567899875 567 99999993 4 89999999999998653 46899777532 2
Q ss_pred CCceeeCccceeeeEEEEeCCCCEEEEEeCCCC
Q 011566 451 GPAIILGDFQLQNFYLEFDLANDRFGFAKQKCA 483 (483)
Q Consensus 451 ~~~~IlG~~fl~~~yvvfD~~~~~igfa~~~C~ 483 (483)
.+.||||++|||++|+|||++++|||||+++|+
T Consensus 325 ~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~ 357 (361)
T 1mpp_A 325 GNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASG 357 (361)
T ss_dssp SSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTT
T ss_pred CCCEEEChHHhccEEEEEECCCCEEEEEEcccC
Confidence 346999999999999999999999999999995
No 12
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=4e-57 Score=451.53 Aligned_cols=306 Identities=23% Similarity=0.302 Sum_probs=253.0
Q ss_pred ccccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCcceecCC
Q 011566 92 IKTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNF--PNVDPSRIPAFIPKRSSSSQLIGCQ 169 (483)
Q Consensus 92 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~--~~~~~~~~~~f~p~~SsT~~~~~c~ 169 (483)
+.++|.+. +..|+++|.||||||+ +.|+|||||+++||+|.. .+|..|.. ....|..++.|+|++|+||+...|
T Consensus 3 ~~~~l~~~-~~~Y~~~i~iGtP~q~-~~v~~DTGSs~~Wv~~~~-~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~- 78 (334)
T 1j71_A 3 VPTTLINE-GPSYAADIVVGSNQQK-QTVVIDTGSSDLWVVDTD-AECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQ- 78 (334)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEE-EEEEEETTCCCEEEEEEE-EEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEE-
T ss_pred eeEEEecC-CcEEEEEEEEcCCCcE-EEEEEcCCCCCEEEecCC-CCCcCcccccccccccCCCcCCcccCCCcccCCC-
Confidence 45667765 5899999999999999 999999999999998541 04654421 122456688999999999998764
Q ss_pred CcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecccee-EEEEEEEEEEEeCCcCcCceeeeccccCCCCCceEeec
Q 011566 170 NPKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGF-TAGLLLSETLRFPSKTVPNFLAGCSILSDRQPAGIAGF 248 (483)
Q Consensus 170 ~~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~-~~G~~~~D~v~~~~~~~~~~~fg~~~~~~~~~~GIlGL 248 (483)
.|.+.|++|+ +.|.+++|+|+|++.+++++.|||++... ..+|||||
T Consensus 79 -------------------------------~~~i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~-~~~GilGL 126 (334)
T 1j71_A 79 -------------------------------DFSIEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS-VDQGIMGI 126 (334)
T ss_dssp -------------------------------EEEEEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-SSSCEEEC
T ss_pred -------------------------------ceEEEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC-CCccEEEE
Confidence 8999999998 89999999999999999999999998654 45999999
Q ss_pred CCCCC--------Cccccc------ccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCCCCCC
Q 011566 249 GRSSE--------SLPSQL------GLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSSSAF 314 (483)
Q Consensus 249 g~~~~--------S~~~Ql------~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~ 314 (483)
|+..+ +++.|| ..++||+||.+. ....|.|+|||+|+++ +.|++.|+|+..
T Consensus 127 g~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~-----~~~~G~l~fGg~d~~~-~~g~l~~~p~~~--------- 191 (334)
T 1j71_A 127 GFTADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSE-----DASTGKIIFGGVDNAK-YTGTLTALPVTS--------- 191 (334)
T ss_dssp SCGGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCT-----TCSEEEEEETEEETTS-EEEEEEEEECCC---------
T ss_pred cCCcccCccccCCcHHHHHHHCCCCCccEEEEEeCCC-----CCCCeEEEEeeechHH-ccCceEEEEccC---------
Confidence 99764 444443 348999999863 2357899999999998 999999999986
Q ss_pred CcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccCCc-cC
Q 011566 315 GEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSGL-RP 393 (483)
Q Consensus 315 ~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~ 393 (483)
..+|.|.|++|+|+++.+..+ ..+||||||++++||++++++|++++.+... .....+. ++
T Consensus 192 ~~~~~v~l~~i~v~g~~~~~~-----------~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~-------~~~~~~~~~~ 253 (334)
T 1j71_A 192 SVELRVHLGSINFDGTSVSTN-----------ADVVLDSGTTITYFSQSTADKFARIVGATWD-------SRNEIYRLPS 253 (334)
T ss_dssp SSSCEEEEEEEEETTEEEEEE-----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEE-------TTTTEEECSS
T ss_pred CCeEEEEEeEEEECCEeccCC-----------ccEEEeCCCCcEecCHHHHHHHHHHcCCccc-------CCCceEEEEc
Confidence 458999999999999887532 5699999999999999999999999865432 1122445 78
Q ss_pred cccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeCCceEEEEEEecCCCCCCCCCCCceeeCccceeeeEEEEeCCCC
Q 011566 394 CFDISGKKSVYLPELILKFKGGAKMALPPENYFALVGNEVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYLEFDLAND 473 (483)
Q Consensus 394 C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~ 473 (483)
|+. +|.|+|+|.+|++|+||+++|+++..++..|++.++.. +.||||+.|||++|+|||++++
T Consensus 254 C~~--------~p~i~f~f~~g~~~~i~~~~y~~~~~~~~~C~~~i~~~---------~~~iLG~~fl~~~y~vfD~~~~ 316 (334)
T 1j71_A 254 CDL--------SGDAVFNFDQGVKITVPLSELILKDSDSSICYFGISRN---------DANILGDNFLRRAYIVYDLDDK 316 (334)
T ss_dssp SCC--------CSEEEEEESTTCEEEEEGGGGEEECSSSSCEEESEEEC---------TTCEECHHHHTTEEEEEETTTT
T ss_pred CCC--------CCceEEEEcCCcEEEECHHHheeecCCCCeeEEEEeEC---------CCcEEChHhhccEEEEEECCCC
Confidence 964 59999999778999999999999865555699988643 2499999999999999999999
Q ss_pred EEEEEeCCCC
Q 011566 474 RFGFAKQKCA 483 (483)
Q Consensus 474 ~igfa~~~C~ 483 (483)
|||||+++|+
T Consensus 317 ~igfA~~~~~ 326 (334)
T 1j71_A 317 TISLAQVKYT 326 (334)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEecCCC
Confidence 9999999995
No 13
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=2e-56 Score=445.62 Aligned_cols=305 Identities=29% Similarity=0.427 Sum_probs=253.9
Q ss_pred cccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCcceecCCC
Q 011566 93 KTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVD--CNFPNVDPSRIPAFIPKRSSSSQLIGCQN 170 (483)
Q Consensus 93 ~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~--C~~~~~~~~~~~~f~p~~SsT~~~~~c~~ 170 (483)
..||. +.++.|+++|.||||||+ +.|+|||||+++||+|. .|.. |. .++.|+|++|+||+...|
T Consensus 4 ~~~l~-~~~~~Y~~~i~iGtP~q~-~~v~~DTGSs~lWv~~~---~C~~~~C~-------~~~~y~~~~SsT~~~~~~-- 69 (329)
T 1htr_B 4 YEPMA-YMDAAYFGEISIGTPPQN-FLVLFDTGSSNLWVPSV---YCQSQACT-------SHSRFNPSESSTYSTNGQ-- 69 (329)
T ss_dssp CCGGG-GTTCCEEEEEEETTTTEE-EEEEEETTCCCEEEEBT---TCCSHHHH-------TSCCBCGGGCTTCEEEEE--
T ss_pred eeeeE-EcCCEEEEEEEECCCCcE-EEEEEcCCCccEEEecC---CCCCcccC-------CCCcCCCccCCCeEECCc--
Confidence 35677 777999999999999999 99999999999999999 8864 64 368999999999998763
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCCcCcCceeeeccccCC------CCCce
Q 011566 171 PKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPSKTVPNFLAGCSILSD------RQPAG 244 (483)
Q Consensus 171 ~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~~~~~~~~fg~~~~~~------~~~~G 244 (483)
.|.+.|++|++.|.+++|+|+|++.+++++.|||+.... ...+|
T Consensus 70 ------------------------------~~~i~Yg~gs~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~G 119 (329)
T 1htr_B 70 ------------------------------TFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDG 119 (329)
T ss_dssp ------------------------------EEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCE
T ss_pred ------------------------------EEEEEeCCCCeEEEEEeeeEEEcceEECceEEEEEEEccccccccCCCce
Confidence 899999999999999999999999999999999998642 23499
Q ss_pred EeecCCCCCCcc----------cc--cccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCCCC
Q 011566 245 IAGFGRSSESLP----------SQ--LGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSSS 312 (483)
Q Consensus 245 IlGLg~~~~S~~----------~Q--l~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~ 312 (483)
|||||++.++.. +| +..++||+||.+.. ...+|.|+|||+|+++ +.|++.|+|+..
T Consensus 120 ilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~----~~~~G~l~fGg~d~~~-~~g~l~~~p~~~------- 187 (329)
T 1htr_B 120 IMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQ----GSSGGAVVFGGVDSSL-YTGQIYWAPVTQ------- 187 (329)
T ss_dssp EEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSC----SSEEEEEEESSCCGGG-EEEEEEEEEBCS-------
T ss_pred EEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCC----CCCCcEEEEcccCHHH-cCCceEEEECCC-------
Confidence 999999887643 23 44589999998751 1137999999999988 999999999975
Q ss_pred CCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccCCcc
Q 011566 313 AFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSGLR 392 (483)
Q Consensus 313 ~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 392 (483)
..+|.|.|++|+|+++.+.. ......+||||||++++||++++++|++++.+... ..+.+.+
T Consensus 188 --~~~~~v~l~~i~v~~~~~~~--------~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~--------~~g~~~~ 249 (329)
T 1htr_B 188 --ELYWQIGIEEFLIGGQASGW--------CSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQED--------EYGQFLV 249 (329)
T ss_dssp --SSSCEEEECEEEETTEECCT--------TTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEEC--------TTSCEEE
T ss_pred --CceEEEEEeEEEECCceeee--------cCCCceEEEecCCccEECCHHHHHHHHHHhCCeec--------CCCeEEE
Confidence 46999999999999987531 12236799999999999999999999988854321 2244678
Q ss_pred CcccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeCCceEEEEEEecCCCCCCCCCCC-ceeeCccceeeeEEEEeCC
Q 011566 393 PCFDISGKKSVYLPELILKFKGGAKMALPPENYFALVGNEVLCLILFTDNAAGPALGRGP-AIILGDFQLQNFYLEFDLA 471 (483)
Q Consensus 393 ~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~C~~~i~~~~~~~~~~~~~-~~IlG~~fl~~~yvvfD~~ 471 (483)
+|+.. ..+|+|+|+| +|++|+||+++|+.+.. +.|+..+...+. ....++ .||||++|||++|+|||++
T Consensus 250 ~C~~~-----~~~P~i~f~f-~g~~~~i~~~~y~~~~~--g~C~~~~~~~~~--~~~~~~~~~iLG~~fl~~~yvvfD~~ 319 (329)
T 1htr_B 250 NCNSI-----QNLPSLTFII-NGVEFPLPPSSYILSNN--GYCTVGVEPTYL--SSQNGQPLWILGDVFLRSYYSVYDLG 319 (329)
T ss_dssp CGGGG-----GGSCCEEEEE-TTEEEEECHHHHEEECS--SCEEESEEEECC--CCTTSSCEEEECHHHHTTEEEEEETT
T ss_pred eCCCc-----ccCCcEEEEE-CCEEEEECHHHhcccCC--CEEEEEEEECCC--CCCCCCceEEEChHHhccEEEEEECC
Confidence 99875 5789999999 89999999999999865 389987764321 111234 7999999999999999999
Q ss_pred CCEEEEEeCC
Q 011566 472 NDRFGFAKQK 481 (483)
Q Consensus 472 ~~~igfa~~~ 481 (483)
++|||||+++
T Consensus 320 ~~~igfa~~~ 329 (329)
T 1htr_B 320 NNRVGFATAA 329 (329)
T ss_dssp TTEEEEEEEC
T ss_pred CCEEEEEeCC
Confidence 9999999975
No 14
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=6.1e-57 Score=451.72 Aligned_cols=316 Identities=23% Similarity=0.338 Sum_probs=258.8
Q ss_pred cccccccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceecC
Q 011566 89 NSLIKTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNFPNVDPSRIPAFIPKRSSSSQLIGC 168 (483)
Q Consensus 89 ~~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~~~~~~~~~~~f~p~~SsT~~~~~c 168 (483)
+....+||.++.+..|+++|.||||||+ ++|+|||||+++||+|. .|..|. ..|..++.|+|++|+||+...|
T Consensus 5 ~~~~~~~l~n~~d~~Y~~~i~iGtP~q~-~~v~~DTGSs~~Wv~~~---~C~~~~---~~C~~~~~y~~~~SsT~~~~~~ 77 (341)
T 3k1w_A 5 NTTSSVILTNYMDTQYYGEIGIGTPPQT-FKVVFDTGSSNVWVPSS---KCSRLY---TACVYHKLFDASDSSSYKHNGT 77 (341)
T ss_dssp CBCEEEEEEEETTTEEEEEEEETTTTEE-EEEEEETTCCCEEEEBT---TSCTTC---HHHHTSCCBCGGGCTTCEEEEE
T ss_pred CCCccccceEccCCEEEEEEEEcCCCcE-EEEEEeCCCcceEEccC---CCCCCC---CcccCCCCCCCCcCcCeeECCC
Confidence 4456788999888999999999999999 99999999999999999 887321 1123478999999999998653
Q ss_pred CCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCCcCcCceeeeccccCC------CCC
Q 011566 169 QNPKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPSKTVPNFLAGCSILSD------RQP 242 (483)
Q Consensus 169 ~~~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~~~~~~~~fg~~~~~~------~~~ 242 (483)
.|.+.|++|++.|.+++|+|+|++.++ ++.|||+.... ...
T Consensus 78 --------------------------------~~~i~Yg~gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~ 124 (341)
T 3k1w_A 78 --------------------------------ELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEF 124 (341)
T ss_dssp --------------------------------EEEEEETTEEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSS
T ss_pred --------------------------------EEEEEECCcEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCc
Confidence 899999999999999999999999999 99999998543 234
Q ss_pred ceEeecCCCCCC----------cccc--cccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCC
Q 011566 243 AGIAGFGRSSES----------LPSQ--LGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGS 310 (483)
Q Consensus 243 ~GIlGLg~~~~S----------~~~Q--l~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~ 310 (483)
+||||||++..+ +.+| +..++||+||.+... +....+|.|+|||+|+++ +.|+++|+|+..
T Consensus 125 ~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~-~~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~----- 197 (341)
T 3k1w_A 125 DGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSE-NSQSLGGQIVLGGSDPQH-YEGNFHYINLIK----- 197 (341)
T ss_dssp SEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC------CCEEEEESSCCGGG-EEEEEEEEECSS-----
T ss_pred ceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCC-cCCCCCCEEEECccChHH-ccCceEEEecCC-----
Confidence 999999998776 2344 455899999987521 112347899999999999 999999999985
Q ss_pred CCCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccCC
Q 011566 311 SSAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSG 390 (483)
Q Consensus 311 ~~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 390 (483)
..+|.|.+++|+|+++.+.. .....+||||||++++||++++++|++++.+... ..+ +
T Consensus 198 ----~~~w~v~l~~i~v~~~~~~~---------~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~--------~~g-~ 255 (341)
T 3k1w_A 198 ----TGVWQIQMKGVSVGSSTLLC---------EDGCLALVDTGASYISGSTSSIEKLMEALGAKKR--------LFD-Y 255 (341)
T ss_dssp ----TTSCEEEECCEEETTEEEEC---------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC--------SSC-E
T ss_pred ----CCEEEEEEeEEEECCEEeec---------CCCCEEEEECCCChhcCCHHHHHHHHHHcCCeec--------CCC-e
Confidence 57999999999999987543 2236799999999999999999999998854321 123 6
Q ss_pred ccCcccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeCC--ceEEEEEEecCCCCCCCCCCCceeeCccceeeeEEEE
Q 011566 391 LRPCFDISGKKSVYLPELILKFKGGAKMALPPENYFALVGN--EVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYLEF 468 (483)
Q Consensus 391 ~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yvvf 468 (483)
.++|... ..+|+|+|+| +|++|+||+++|+..... +..|+..+...+. .......||||++|||++|+||
T Consensus 256 ~~~C~~~-----~~~p~i~f~f-~g~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~--~~~~~~~~iLG~~fl~~~y~vf 327 (341)
T 3k1w_A 256 VVKCNEG-----PTLPDISFHL-GGKEYTLTSADYVFQESYSSKKLCTLAIHAMDI--PPPTGPTWALGATFIRKFYTEF 327 (341)
T ss_dssp EEEGGGG-----GGCCCEEEEE-TTEEEEECHHHHBCCSCCCTTSEEEBSEEECCC--CTTTCSCEEECHHHHTTEEEEE
T ss_pred EEeCCCC-----CcCCcEEEEE-CCEEEEECHHHheeEccCCCCCeEEeEEEeccc--CCCCCCeEEEChHHhcceEEEE
Confidence 7889865 6789999999 899999999999987542 5789988765331 1223457999999999999999
Q ss_pred eCCCCEEEEEeCC
Q 011566 469 DLANDRFGFAKQK 481 (483)
Q Consensus 469 D~~~~~igfa~~~ 481 (483)
|++++|||||+++
T Consensus 328 D~~~~~igfA~a~ 340 (341)
T 3k1w_A 328 DRRNNRIGFALAR 340 (341)
T ss_dssp ETTTTEEEEEEEC
T ss_pred eCCCCEEEEEECC
Confidence 9999999999975
No 15
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=2.3e-56 Score=451.91 Aligned_cols=299 Identities=21% Similarity=0.289 Sum_probs=253.0
Q ss_pred ccccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCcceecCC
Q 011566 92 IKTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCV--DCNFPNVDPSRIPAFIPKRSSSSQLIGCQ 169 (483)
Q Consensus 92 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~--~C~~~~~~~~~~~~f~p~~SsT~~~~~c~ 169 (483)
...||.++.++.|+++|+||||||+ +.|+|||||+++||+|. .|. .|. .++.|+|++|+||+...|
T Consensus 52 ~~~pl~~~~~~~Y~~~i~iGTP~Q~-~~v~~DTGSs~lWv~~~---~C~~~~C~-------~~~~y~~~~SsT~~~~~~- 119 (375)
T 1miq_A 52 DVIELDDVANIMFYGEGEVGDNHQK-FMLIFDTGSANLWVPSK---KCNSSGCS-------IKNLYDSSKSKSYEKDGT- 119 (375)
T ss_dssp BCCCGGGTBCEEEECCCEETTTTEE-CCEEEETTCCCEEEEBT---TCCSSGGG-------GSCCBCGGGCTTCEEEEE-
T ss_pred ceEEcccCCCCEEEEEEEECCCCeE-EEEEEeCCCcceEEccC---CCCccccc-------CCCcCCCccCCceEECCc-
Confidence 4578888888999999999999999 99999999999999999 886 453 478999999999998763
Q ss_pred CcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCCcCcCceeeecccc----C----CCC
Q 011566 170 NPKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPSKTVPNFLAGCSIL----S----DRQ 241 (483)
Q Consensus 170 ~~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~~~~~~~~fg~~~~----~----~~~ 241 (483)
.|.+.|++|++.|.+++|+|+|++.++++ .|||+.. . ...
T Consensus 120 -------------------------------~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~~f~~~~ 167 (375)
T 1miq_A 120 -------------------------------KVDITYGSGTVKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEPIYSSVE 167 (375)
T ss_dssp -------------------------------EEEEEETTEEEEEEEEEEEEEETTEEEEE-EEEEEEECGGGTTHHHHSC
T ss_pred -------------------------------EEEEEeCCCeEEEEEEEEEEEEcCceECc-EEEEEEeccccccccccCC
Confidence 89999999999999999999999999999 9999987 3 234
Q ss_pred CceEeecCCCCCCcc----------cc--cccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCC
Q 011566 242 PAGIAGFGRSSESLP----------SQ--LGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVG 309 (483)
Q Consensus 242 ~~GIlGLg~~~~S~~----------~Q--l~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~ 309 (483)
.+||||||++.++.. +| +..++||+||.+. ...+|.|+|||+|+++ +.|++.|+|+..
T Consensus 168 ~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~-----~~~~G~l~fGg~d~~~-~~g~l~~~p~~~---- 237 (375)
T 1miq_A 168 FDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVH-----DVHAGYLTIGGIEEKF-YEGNITYEKLNH---- 237 (375)
T ss_dssp CCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTT-----CTTEEEEEESSCCGGG-EEEEEEEEEBSS----
T ss_pred CceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEEecCC-----CCCCeEEEEcccCHHH-cCCceEEEecCC----
Confidence 599999999887653 33 4458999999874 1257999999999988 999999999975
Q ss_pred CCCCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccC
Q 011566 310 SSSAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKS 389 (483)
Q Consensus 310 ~~~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 389 (483)
..+|.|.++ |+|+++.+ . ...+||||||++++||++++++|++++.+... ...+.
T Consensus 238 -----~~~w~v~l~-i~v~g~~~-~-----------~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-------~~~g~ 292 (375)
T 1miq_A 238 -----DLYWQIDLD-VHFGKQTM-E-----------KANVIVDSGTTTITAPSEFLNKFFANLNVIKV-------PFLPF 292 (375)
T ss_dssp -----SSSSEEEEE-EEETTEEE-E-----------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEC-------TTSSC
T ss_pred -----CceEEEEEE-EEECCEEc-c-----------cceEEecCCCccEEcCHHHHHHHHHHhCCccc-------CCCCe
Confidence 569999999 99999876 1 26799999999999999999999998854321 22345
Q ss_pred CccCcccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeCC--ceEEEEEEecCCCCCCCCCCCceeeCccceeeeEEE
Q 011566 390 GLRPCFDISGKKSVYLPELILKFKGGAKMALPPENYFALVGN--EVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYLE 467 (483)
Q Consensus 390 ~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yvv 467 (483)
+.++|+. ..+|+|+|+| +|++|+||+++|+.+... ...|+..+...+. ..+.||||++|||++|+|
T Consensus 293 ~~~~C~~------~~~P~i~f~f-~g~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~-----~~~~~ILG~~fl~~~yvv 360 (375)
T 1miq_A 293 YVTTCDN------KEMPTLEFKS-ANNTYTLEPEYYMNPILEVDDTLCMITMLPVDI-----DSNTFILGDPFMRKYFTV 360 (375)
T ss_dssp EEEETTC------TTCCCEEEEC-SSCEEEECGGGSEEESSSSSCSEEEESEEECCS-----SSSEEEECHHHHHHEEEE
T ss_pred EEEECCC------CCCCcEEEEE-CCEEEEECHHHhEeeccCCCCCeEEEEEEECCC-----CCCcEEECHHHhccEEEE
Confidence 6788985 4679999999 899999999999998652 4589977764431 125799999999999999
Q ss_pred EeCCCCEEEEEeCC
Q 011566 468 FDLANDRFGFAKQK 481 (483)
Q Consensus 468 fD~~~~~igfa~~~ 481 (483)
||++++|||||+++
T Consensus 361 fD~~~~riGfA~~~ 374 (375)
T 1miq_A 361 FDYDKESVGFAIAK 374 (375)
T ss_dssp EETTTTEEEEEEEC
T ss_pred EECCCCEEEEEEcC
Confidence 99999999999874
No 16
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=3.3e-56 Score=446.00 Aligned_cols=303 Identities=22% Similarity=0.338 Sum_probs=252.5
Q ss_pred ccccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCcceecC
Q 011566 92 IKTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRY---RCVDCNFPNVDPSRIPAFIPKRSSSSQLIGC 168 (483)
Q Consensus 92 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~---~C~~C~~~~~~~~~~~~f~p~~SsT~~~~~c 168 (483)
+.+||.+.+ +.|+++|.||||||+ +.|+|||||+++||++.. . +|..|. .++.|+|++|+||+...|
T Consensus 3 i~~~l~~~~-~~Y~~~i~iGtP~Q~-~~v~~DTGSs~~Wv~~~~-~~C~~~~~C~-------~~~~y~~~~SsT~~~~~~ 72 (339)
T 3fv3_A 3 ISLSLINEG-PSYASKVSVGSNKQQ-QTVIIDTGSSDFWVVDSN-AQCGKGVDCK-------SSGTFTPSSSSSYKNLGA 72 (339)
T ss_dssp EEEEEEECS-SSEEEEEEETTTTEE-EEEEEETTCCCEEEEEEE-EEECTTCCTT-------TTCCBCGGGCTTCEEEEE
T ss_pred eeeEEEcCC-CEEEEEEEEcCCCcE-EEEEEeCCCCceEEecCC-CCCCCCCCCC-------CCCcCCCccCcceeeCCc
Confidence 556777664 799999999999999 999999999999998430 0 444554 478999999999999874
Q ss_pred CCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecccee-EEEEEEEEEEEeCCcCcCceeeeccccCCCCCceEee
Q 011566 169 QNPKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGF-TAGLLLSETLRFPSKTVPNFLAGCSILSDRQPAGIAG 247 (483)
Q Consensus 169 ~~~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~-~~G~~~~D~v~~~~~~~~~~~fg~~~~~~~~~~GIlG 247 (483)
.|.+.|++|+ +.|.+++|+|+|++.+++++.|||++.... .+||||
T Consensus 73 --------------------------------~~~i~Yg~gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-~~GilG 119 (339)
T 3fv3_A 73 --------------------------------AFTIRYGDGSTSQGTWGKDTVTINGVSITGQQIADVTQTSV-DQGILG 119 (339)
T ss_dssp --------------------------------EEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-SSCEEE
T ss_pred --------------------------------eEEEEECCCceEEEEEEEEEEEECCEEECceEEEEEEecCC-CceeEE
Confidence 8999999995 999999999999999999999999987654 499999
Q ss_pred cCCCCCC----------------ccccc------ccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeecee
Q 011566 248 FGRSSES----------------LPSQL------GLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYK 305 (483)
Q Consensus 248 Lg~~~~S----------------~~~Ql------~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~ 305 (483)
||++.++ ++.|| ..++||+||.+. ....|.|+|||+|+++ +.|++.|+|+..
T Consensus 120 Lg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~-----~~~~G~l~fGg~d~~~-~~g~l~~~p~~~ 193 (339)
T 3fv3_A 120 IGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSP-----SAETGTIIFGGVDNAK-YSGKLVAEQVTS 193 (339)
T ss_dssp CSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCT-----TCSEEEEEETEEETTS-BSSCCEEEEBCC
T ss_pred ecCccccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCC-----CCCCeEEEEeeechHH-eecceEEEeccc
Confidence 9997754 34444 337999999874 2357899999999999 999999999986
Q ss_pred CCCCCCCCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccc
Q 011566 306 NPVGSSSAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADV 385 (483)
Q Consensus 306 ~~~~~~~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~ 385 (483)
..+|.|+|++|+|+++.+... ..+||||||++++||++++++|++++.+..... ..
T Consensus 194 ---------~~~~~v~l~~i~v~g~~~~~~-----------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~----~~ 249 (339)
T 3fv3_A 194 ---------SQALTISLASVNLKGSSFSFG-----------DGALLDSGTTLTYFPSDFAAQLADKAGARLVQV----AR 249 (339)
T ss_dssp ---------SSSCEEEEEEEEESSCEEEEE-----------EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE----ET
T ss_pred ---------CccEEEEEEEEEECCEeecCC-----------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc----cc
Confidence 458999999999999887532 569999999999999999999999997543210 01
Q ss_pred cccCCccCcccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeCCceEEEEEEecCCCCCCCCCCCceeeCccceeeeE
Q 011566 386 EKKSGLRPCFDISGKKSVYLPELILKFKGGAKMALPPENYFALVGNEVLCLILFTDNAAGPALGRGPAIILGDFQLQNFY 465 (483)
Q Consensus 386 ~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~y 465 (483)
..+.+.++|+. ..+|+|+|+|.+|++|+||+++|+.+.. ...|++.+... +.||||++|||++|
T Consensus 250 ~~~~~~~~C~~------~~~p~i~f~f~~g~~~~v~~~~~~~~~~-~~~C~~~i~~~---------~~~ilG~~fl~~~y 313 (339)
T 3fv3_A 250 DQYLYFIDCNT------DTSGTTVFNFGNGAKITVPNTEYVYQNG-DGTCLWGIQPS---------DDTILGDNFLRHAY 313 (339)
T ss_dssp TEEEEEECTTC------CCCSEEEEEETTSCEEEEEGGGGEEECS-SSCEEESEEEC---------SSCEECHHHHTTEE
T ss_pred cCceEEEecCC------CCCCcEEEEECCCCEEEECHHHheeeCC-CCeEEEEEEeC---------CcEEeChHHHhCEE
Confidence 23456789985 3579999999658999999999998754 45798888641 35999999999999
Q ss_pred EEEeCCCCEEEEEeCCCC
Q 011566 466 LEFDLANDRFGFAKQKCA 483 (483)
Q Consensus 466 vvfD~~~~~igfa~~~C~ 483 (483)
+|||++++|||||+++|+
T Consensus 314 ~vfD~~~~~igfA~~~~~ 331 (339)
T 3fv3_A 314 LLYNLDANTISIAQVKYT 331 (339)
T ss_dssp EEEETTTTEEEEEEBCCC
T ss_pred EEEECCCCEEEEEecCCC
Confidence 999999999999999995
No 17
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=2.6e-56 Score=447.22 Aligned_cols=309 Identities=22% Similarity=0.318 Sum_probs=252.6
Q ss_pred ccccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCcceecCC
Q 011566 92 IKTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNF--PNVDPSRIPAFIPKRSSSSQLIGCQ 169 (483)
Q Consensus 92 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~--~~~~~~~~~~f~p~~SsT~~~~~c~ 169 (483)
+.+++.+ .++.|+++|+||||+|+ +.|+|||||+++||++.. .+|..|.. ....|..++.|+|++|+||+...|
T Consensus 3 v~~~l~~-~~~~Y~~~i~iGtP~q~-~~v~~DTGSs~~Wv~~~~-~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~- 78 (342)
T 2qzx_A 3 VAVTLHN-EAITYTADITVGSDNQK-LNVIVDTGSSDLWIPDSN-VICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNT- 78 (342)
T ss_dssp EEEEEEE-CSSCEEEEEEETTTTEE-EEEEEETTCCCEEEEEEE-EEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEE-
T ss_pred eeEEEec-CCeEEEEEEEECCCCcE-EEEEEeCCCCCeEEecCC-CCccCccccCccccccCCCcCCcccCCCcccCCC-
Confidence 4556666 45899999999999999 999999999999998541 14654421 123456688999999999998764
Q ss_pred CcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecccee-EEEEEEEEEEEeCCcCcCceeeeccccCCCCCceEeec
Q 011566 170 NPKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGF-TAGLLLSETLRFPSKTVPNFLAGCSILSDRQPAGIAGF 248 (483)
Q Consensus 170 ~~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~-~~G~~~~D~v~~~~~~~~~~~fg~~~~~~~~~~GIlGL 248 (483)
.|.+.|++|+ +.|.+++|+|+|++.+++++.|||++... ..+|||||
T Consensus 79 -------------------------------~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~-~~~GilGL 126 (342)
T 2qzx_A 79 -------------------------------RFDIKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS-ARKGILGI 126 (342)
T ss_dssp -------------------------------EEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC-SSSCEEEC
T ss_pred -------------------------------cEEEEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC-CCcCEEEE
Confidence 8999999998 89999999999999999999999998654 45999999
Q ss_pred CCCCC--------Cccccc------ccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCCCCCC
Q 011566 249 GRSSE--------SLPSQL------GLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSSSAF 314 (483)
Q Consensus 249 g~~~~--------S~~~Ql------~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~ 314 (483)
|+... +++.|| ..++||+||.+. ....|.|+|||+|+++ +.|++.|+|+..
T Consensus 127 g~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~-----~~~~G~l~fGg~d~~~-~~g~l~~~p~~~--------- 191 (342)
T 2qzx_A 127 GFQSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSA-----EASTGQIIFGGIDKAK-YSGSLVDLPITS--------- 191 (342)
T ss_dssp SCGGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCT-----TCSEEEEEETEEETTS-BSSCCEEEECCC---------
T ss_pred ccccccCCCccCccHHHHHHHCCCcCccEEEEEeCCC-----CCCCeEEEECccchhh-EecceEEEeccC---------
Confidence 99764 444443 348999999863 2357899999999998 999999999986
Q ss_pred CcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccCCccCc
Q 011566 315 GEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSGLRPC 394 (483)
Q Consensus 315 ~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C 394 (483)
..+|.|.|++|+|+++.+..+ ..+||||||++++||++++++|++++.+.... .. ...+.+.++|
T Consensus 192 ~~~~~v~l~~i~v~g~~~~~~-----------~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~-~~---~~~~~~~~~C 256 (342)
T 2qzx_A 192 EKKLTVGLRSVNVRGRNVDAN-----------TNVLLDSGTTISYFTRSIVRNILYAIGAQMKF-DS---AGNKVYVADC 256 (342)
T ss_dssp SSSCEEEEEEEEETTEEEEEE-----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEEE-CT---TSCEEEEECT
T ss_pred CceEEEEEeEEEECCEecCCC-----------cCEEEeCCCCCEEcCHHHHHHHHHHhCCeeee-cc---CCCcEEEEEC
Confidence 458999999999999887532 56999999999999999999999998654321 00 1122456788
Q ss_pred ccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeC-----CceEEEEEEecCCCCCCCCCCCceeeCccceeeeEEEEe
Q 011566 395 FDISGKKSVYLPELILKFKGGAKMALPPENYFALVG-----NEVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYLEFD 469 (483)
Q Consensus 395 ~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~-----~~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD 469 (483)
+. +|.|+|+|.+|++|+||+++|+++.. ....|++.++.. +.||||++|||++|+|||
T Consensus 257 ~~--------~p~i~f~f~~g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~---------~~~iLG~~fl~~~y~vfD 319 (342)
T 2qzx_A 257 KT--------SGTIDFQFGNNLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES---------EDNILGDNFLRSAYVVYN 319 (342)
T ss_dssp TC--------CCEEEEEETTTEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC---------SSCEECHHHHTTEEEEEE
T ss_pred CC--------CCcEEEEECCCcEEEEcHHHhcccccccCCCCCCccEEEEecC---------CCcEeChHhhhcEEEEEE
Confidence 64 59999999768999999999998742 246899988643 249999999999999999
Q ss_pred CCCCEEEEEeCCCC
Q 011566 470 LANDRFGFAKQKCA 483 (483)
Q Consensus 470 ~~~~~igfa~~~C~ 483 (483)
++++|||||+++|+
T Consensus 320 ~~~~~igfA~~~~~ 333 (342)
T 2qzx_A 320 LDDKKISMAPVKYT 333 (342)
T ss_dssp TTTTEEEEEEBCCC
T ss_pred CCCCEEEEEeeCCC
Confidence 99999999999995
No 18
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=4.4e-56 Score=442.90 Aligned_cols=295 Identities=21% Similarity=0.283 Sum_probs=245.8
Q ss_pred CcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceecCCCcCCCCCCCC
Q 011566 100 SYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNFPNVDPSRIPAFIPKRSSSSQLIGCQNPKCSWIFGP 179 (483)
Q Consensus 100 ~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~~~~~~~~~~~f~p~~SsT~~~~~c~~~~c~~~~~~ 179 (483)
.++.|+++|+||||||+ +.|+|||||+++||+|. +|..|.. +.++.|+|++|+||+.++|
T Consensus 13 ~~~~Y~~~i~iGTP~Q~-~~v~~DTGSs~lWv~~~---~C~~~~~-----~~~~~y~~~~SsT~~~~~~----------- 72 (329)
T 3c9x_A 13 ADSEYITSVSIGTPAQV-LPLDFDTGSSDLWVFSS---ETPKSSA-----TGHAIYTPSKSSTSKKVSG----------- 72 (329)
T ss_dssp TCCCEEEEEEETTTTEE-EEEEEETTCCCEEECBT---TSCHHHH-----TTSCCBCGGGCTTCEECTT-----------
T ss_pred CCCEEEEEEEECCCCeE-EEEEEcCCCCCeEEecC---CCCcccc-----CCCCcCCcccCcCceEcCC-----------
Confidence 46899999999999999 99999999999999999 8987642 4578999999999998642
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcceeecccee-EEEEEEEEEEEeCCcCcCceeeeccccCC------CCCceEeecCCCC
Q 011566 180 NVESRCKGCSPRNKTCPLACPSYLLQYGLGF-TAGLLLSETLRFPSKTVPNFLAGCSILSD------RQPAGIAGFGRSS 252 (483)
Q Consensus 180 ~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~-~~G~~~~D~v~~~~~~~~~~~fg~~~~~~------~~~~GIlGLg~~~ 252 (483)
| .|.+.|++|+ +.|.+++|+|+|++.+++++.|||+.... ...+||||||+..
T Consensus 73 ---------------~-----~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~ 132 (329)
T 3c9x_A 73 ---------------A-----SWSISYGDGSSSSGDVYTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDS 132 (329)
T ss_dssp ---------------C-----BEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGG
T ss_pred ---------------C-----eEEEEeCCCCcEEEEEEEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCccc
Confidence 2 8999999998 99999999999999999999999998542 3459999999987
Q ss_pred CCcc-------------cccccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCCCCCCCccee
Q 011566 253 ESLP-------------SQLGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSSSAFGEFYY 319 (483)
Q Consensus 253 ~S~~-------------~Ql~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~w~ 319 (483)
++.+ +|+..++||+||.+. .+|.|+|||+|+++ +.|++.|+|+... ..+|.
T Consensus 133 ~s~~~~~~~~~~~~~l~~~i~~~~FS~~l~~~-------~~G~l~fGg~d~~~-~~g~l~~~p~~~~--------~~~~~ 196 (329)
T 3c9x_A 133 GNQVRPHPQKTWFSNAASSLAEPLFTADLRHG-------QNGSYNFGYIDTSV-AKGPVAYTPVDNS--------QGFWE 196 (329)
T ss_dssp GCCCBSSCCCCHHHHHHTTSSSSEEEEECCSS-------SCEEEEESSCCGGG-CSSCEEEEECBCT--------TSSCE
T ss_pred ccccCCCCCCCHHHHHHHhcCCCEEEEEecCC-------CCcEEEEeCcChhh-cccceEEEEccCC--------CceEE
Confidence 6643 345669999999763 47899999999998 9999999999753 46899
Q ss_pred EEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccCCccCcccccC
Q 011566 320 VGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSGLRPCFDISG 399 (483)
Q Consensus 320 v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 399 (483)
|.|++|+|+++.+. .....+||||||++++||++++++|++++.++.. ....+.+.++|+
T Consensus 197 v~l~~i~v~~~~~~----------~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~------~~~~~~~~~~C~---- 256 (329)
T 3c9x_A 197 FTASGYSVGGGKLN----------RNSIDGIADTGTTLLLLDDNVVDAYYANVQSAQY------DNQQEGVVFDCD---- 256 (329)
T ss_dssp EEECCEEETTCCCC----------SCCEEEEECTTCCSEEECHHHHHHHHTTCTTCEE------ETTTTEEEEETT----
T ss_pred EEEeeEEECCEecc----------CCCceEEEECCCCcEeCCHHHHHHHHHhCCCcEE------cCCCCEEEEECC----
Confidence 99999999997653 1236799999999999999999999887743221 112234567897
Q ss_pred CCccccCeEEEEEcCCcEEEcCCCCceEEeCC--ceEEEEEEecCCCCCCCCCCCceeeCccceeeeEEEEeCCCCEEEE
Q 011566 400 KKSVYLPELILKFKGGAKMALPPENYFALVGN--EVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYLEFDLANDRFGF 477 (483)
Q Consensus 400 ~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~~igf 477 (483)
..+|+|+|+| +|++|+||+++|++...+ ...|++.++..+ ..+.||||+.|||++|+|||++++||||
T Consensus 257 ---~~~P~i~f~f-~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~------~~~~~ILG~~fl~~~y~vfD~~~~riGf 326 (329)
T 3c9x_A 257 ---EDLPSFSFGV-GSSTITIPGDLLNLTPLEEGSSTCFGGLQSSS------GIGINIFGDVALKAALVVFDLGNERLGW 326 (329)
T ss_dssp ---CCCCCEEEEE-TTEEEEECGGGGEEEESSTTCSEEEESEEECT------TTTSEEECHHHHTTEEEEEETTTTEEEE
T ss_pred ---CCCCcEEEEE-CCEEEEECHHHeeeeccCCCCCeEEEEEEcCC------CCCcEEEChHHhccEEEEEECCCCEEeE
Confidence 4579999999 799999999999987532 468999876432 2357999999999999999999999999
Q ss_pred EeC
Q 011566 478 AKQ 480 (483)
Q Consensus 478 a~~ 480 (483)
|+.
T Consensus 327 A~~ 329 (329)
T 3c9x_A 327 AQK 329 (329)
T ss_dssp EEC
T ss_pred ecC
Confidence 973
No 19
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.1e-55 Score=439.35 Aligned_cols=294 Identities=20% Similarity=0.275 Sum_probs=245.1
Q ss_pred cCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceecCCCcCCCCCCC
Q 011566 99 HSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNFPNVDPSRIPAFIPKRSSSSQLIGCQNPKCSWIFG 178 (483)
Q Consensus 99 ~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~~~~~~~~~~~f~p~~SsT~~~~~c~~~~c~~~~~ 178 (483)
..+..|+++|+||||+|+ +.|+|||||+++||+|. +|..| |+.++.|+|++|+||+...|
T Consensus 12 ~~~~~Y~~~i~iGTP~q~-~~v~~DTGSs~lWv~~~---~c~~c------~~~~~~y~~~~SsT~~~~~~---------- 71 (325)
T 2apr_A 12 GNDIEYYGQVTIGTPGKK-FNLDFDTGSSDLWIAST---LCTNC------GSGQTKYDPNQSSTYQADGR---------- 71 (325)
T ss_dssp TTTTEEEEEEEETTTTEE-EEEEEETTCCCCEEEBT---TCSSC------CTTSCCBCGGGCTTCEEEEE----------
T ss_pred CCCCEEEEEEEECCCCeE-EEEEEcCCCCCEEEccC---CCchH------hcCCCCCCcccCCCeeeCCC----------
Confidence 446899999999999999 99999999999999999 89888 24578999999999998543
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcceeecccee-EEEEEEEEEEEeCCcCcCceeeeccccCC-----CCCceEeecCCCC
Q 011566 179 PNVESRCKGCSPRNKTCPLACPSYLLQYGLGF-TAGLLLSETLRFPSKTVPNFLAGCSILSD-----RQPAGIAGFGRSS 252 (483)
Q Consensus 179 ~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~-~~G~~~~D~v~~~~~~~~~~~fg~~~~~~-----~~~~GIlGLg~~~ 252 (483)
.|.+.|++|+ +.|.+++|+|+|++.+++++.|||++... ...+||||||+..
T Consensus 72 ----------------------~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~ 129 (325)
T 2apr_A 72 ----------------------TWSISYGDGSSASGILAKDNVNLGGLLIKGQTIELAKREAASFASGPNDGLLGLGFDT 129 (325)
T ss_dssp ----------------------EEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTSSCSEEEECSCGG
T ss_pred ----------------------EEEEEECCCCCEEEEEEEEEEEECCEEECcEEEEEEeccCcccccCCCceEEEeCCcc
Confidence 8999999998 99999999999999999999999987532 1259999999987
Q ss_pred CCcc-------c----c--cccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCCCCCCCccee
Q 011566 253 ESLP-------S----Q--LGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSSSAFGEFYY 319 (483)
Q Consensus 253 ~S~~-------~----Q--l~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~w~ 319 (483)
++.+ . | +..++||+||.+.. ....|.|+|||+|+++ +.|++.|+|+... ..+|.
T Consensus 130 ~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~----~~~~G~l~fGg~d~~~-~~g~l~~~p~~~~--------~~~~~ 196 (325)
T 2apr_A 130 ITTVRGVKTPMDNLISQGLISRPIFGVYLGKAK----NGGGGEYIFGGYDSTK-FKGSLTTVPIDNS--------RGWWG 196 (325)
T ss_dssp GCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGG----GTCCEEEEETCCCGGG-BCSCCEEEECBCT--------TSSCE
T ss_pred cccccCCCCHHHHHHhcCCCCCceEEEEecCCC----CCCCCEEEEccCCchh-ccCceEEEEccCC--------CCEEE
Confidence 6532 2 3 45589999997631 1257899999999998 9999999999753 46899
Q ss_pred EEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccCCccCcccccC
Q 011566 320 VGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSGLRPCFDISG 399 (483)
Q Consensus 320 v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 399 (483)
|.+++|+||++ +. .....+||||||++++||+++|+++++++.+.+.. .+.+.++|+.
T Consensus 197 v~l~~i~vg~~-~~----------~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~--------~g~~~~~C~~--- 254 (325)
T 2apr_A 197 ITVDRATVGTS-TV----------ASSFDGILDTGTTLLILPNNIAASVARAYGASDNG--------DGTYTISCDT--- 254 (325)
T ss_dssp EEECEEEETTE-EE----------ECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECS--------SSCEEECSCG---
T ss_pred EEEeEEEECCE-ec----------CCCceEEEecCCccEECCHHHHHHHHHHHhcccCC--------CCeEEEECCC---
Confidence 99999999993 22 12367999999999999999999999888654321 1345678973
Q ss_pred CCccccCeEEEEEcCCcEEEcCCCCceEEeCCceEEEEEEecCCCCCCCCCCCceeeCccceeeeEEEEeCCCCEEEEEe
Q 011566 400 KKSVYLPELILKFKGGAKMALPPENYFALVGNEVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYLEFDLANDRFGFAK 479 (483)
Q Consensus 400 ~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~~igfa~ 479 (483)
..+|+|+|+| +|.+|+||+++|+++.. +..|++.++..+ .+.||||++|||++|+|||++++|||||+
T Consensus 255 ---~~~p~i~f~f-~g~~~~ip~~~~~~~~~-~~~C~~~i~~~~-------~~~~iLG~~fl~~~y~vfD~~~~~igfA~ 322 (325)
T 2apr_A 255 ---SAFKPLVFSI-NGASFQVSPDSLVFEEF-QGQCIAGFGYGN-------WGFAIIGDTFLKNNYVVFNQGVPEVQIAP 322 (325)
T ss_dssp ---GGCCCEEEEE-TTEEEEECGGGGEEEEE-TTEEEESEEEES-------SSSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred ---CCCCcEEEEE-CCEEEEECHHHEEEcCC-CCeEEEEEEcCC-------CCCEEECHHHhcceEEEEECCCCEEEEEe
Confidence 3479999999 66799999999988654 568999886421 34699999999999999999999999998
Q ss_pred CC
Q 011566 480 QK 481 (483)
Q Consensus 480 ~~ 481 (483)
++
T Consensus 323 ~~ 324 (325)
T 2apr_A 323 VA 324 (325)
T ss_dssp BC
T ss_pred cC
Confidence 74
No 20
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=5.1e-56 Score=445.20 Aligned_cols=310 Identities=23% Similarity=0.344 Sum_probs=251.9
Q ss_pred ccccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCcceecCC
Q 011566 92 IKTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNF--PNVDPSRIPAFIPKRSSSSQLIGCQ 169 (483)
Q Consensus 92 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~--~~~~~~~~~~f~p~~SsT~~~~~c~ 169 (483)
+.+++.+. ++.|+++|.||||||+ +.|+|||||+++||++.. ..|..|.. ....|..++.|+|++|+||+...|
T Consensus 3 v~~~l~~~-~~~Y~~~i~iGtP~q~-~~v~~DTGSs~~Wv~~~~-~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~- 78 (342)
T 3pvk_A 3 VPVTLHNE-QVTYAADITVGSNNQK-LNVIVDTGSSDLWVPDVN-VDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNT- 78 (342)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEE-EEEEEETTCCCEEEEEEE-EEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEE-
T ss_pred cceEEecC-CcEEEEEEEEcCCCcE-EEEEEECCCcceEEEcCC-CCCcccccccccCCCCCCCcCCCccCcceeecCC-
Confidence 44566654 4899999999999999 999999999999998761 02655432 223456688999999999998764
Q ss_pred CcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecccee-EEEEEEEEEEEeCCcCcCceeeeccccCCCCCceEeec
Q 011566 170 NPKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGF-TAGLLLSETLRFPSKTVPNFLAGCSILSDRQPAGIAGF 248 (483)
Q Consensus 170 ~~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~-~~G~~~~D~v~~~~~~~~~~~fg~~~~~~~~~~GIlGL 248 (483)
.|.+.|++|+ +.|.+++|+|+|++.+++++.|||++... ..+|||||
T Consensus 79 -------------------------------~~~i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~-~~~GilGL 126 (342)
T 3pvk_A 79 -------------------------------PFKIGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS-IDQGILGV 126 (342)
T ss_dssp -------------------------------EEEEECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-SSSCEEEC
T ss_pred -------------------------------eEEEEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC-CCccEEEe
Confidence 8999999998 99999999999999999999999998655 44999999
Q ss_pred CCCCC-------Cccccc------ccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCCCCCCC
Q 011566 249 GRSSE-------SLPSQL------GLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSSSAFG 315 (483)
Q Consensus 249 g~~~~-------S~~~Ql------~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~ 315 (483)
|++.+ +++.|| ..++||+||.+. ....|.|+|||+|+++ +.|++.|+|+.. .
T Consensus 127 g~~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~-----~~~~G~l~fGg~d~~~-~~g~l~~~p~~~---------~ 191 (342)
T 3pvk_A 127 GYKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSP-----DAATGQIIFGGVDNAK-YSGSLIALPVTS---------D 191 (342)
T ss_dssp SCGGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCT-----TCSEEEEEETEEETTS-BSSCCEEEECCC---------S
T ss_pred cCccccccccCCcHHHHHHhcCCCCCceEEEEeCCC-----CCCCcEEEECccCccc-eeeeeEEeecCc---------c
Confidence 99873 454444 337999999864 2357899999999999 999999999986 4
Q ss_pred cceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccCCccCcc
Q 011566 316 EFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSGLRPCF 395 (483)
Q Consensus 316 ~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~ 395 (483)
.+|.|.|++|+|+++.+..+ ...+||||||++++||++++++|++++.+..... ......+.++|+
T Consensus 192 ~~~~v~l~~i~v~g~~~~~~----------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~----~~~~~~~~~~C~ 257 (342)
T 3pvk_A 192 RELRISLGSVEVSGKTINTD----------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQD----SNGNSFYEVDCN 257 (342)
T ss_dssp SSCEEEEEEEEETTEEEEEE----------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEEC----TTSCEEEEECSC
T ss_pred ceEEEEEeEEEECCEEecCC----------CceEEEeCCCCCeecCHHHHHHHHHHcCCeeccc----CCCceEEEEecC
Confidence 58999999999999988642 1579999999999999999999999886543210 011123678887
Q ss_pred cccCCCccccCeEEEEEcCCcEEEcCCCCceEEeC--Cc---eEEEEEEecCCCCCCCCCCCceeeCccceeeeEEEEeC
Q 011566 396 DISGKKSVYLPELILKFKGGAKMALPPENYFALVG--NE---VLCLILFTDNAAGPALGRGPAIILGDFQLQNFYLEFDL 470 (483)
Q Consensus 396 ~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~--~~---~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~ 470 (483)
. .|+|+|+|.+|++|+||+++|+.+.. ++ ..|++.+... +.||||++|||++|+|||+
T Consensus 258 ~--------~p~i~f~f~~g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~---------~~~ilG~~fl~~~y~vfD~ 320 (342)
T 3pvk_A 258 L--------SGDVVFNFSKNAKISVPASEFAASLQGDDGQPYDKCQLLFDVN---------DANILGDNFLRSAYIVYDL 320 (342)
T ss_dssp C--------CSEEEEEESTTCEEEEEGGGGEEC----------CEEESEEEC---------TTCEECHHHHTTEEEEEET
T ss_pred C--------CCceEEEECCCCEEEEcHHHheeeccccCCCcCCeeEEEEeeC---------CCeEeCHHHHhcEEEEEEC
Confidence 4 39999999558999999999998732 22 6899988642 3599999999999999999
Q ss_pred CCCEEEEEeCCCC
Q 011566 471 ANDRFGFAKQKCA 483 (483)
Q Consensus 471 ~~~~igfa~~~C~ 483 (483)
+++|||||+++|+
T Consensus 321 ~~~~igfA~~~~~ 333 (342)
T 3pvk_A 321 DDNEISLAQVKYT 333 (342)
T ss_dssp TTTEEEEEEBCCC
T ss_pred CCCEEEEEecCCC
Confidence 9999999999995
No 21
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=7.6e-56 Score=441.20 Aligned_cols=294 Identities=20% Similarity=0.254 Sum_probs=244.9
Q ss_pred CcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceecCCCcCCCCCCCC
Q 011566 100 SYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNFPNVDPSRIPAFIPKRSSSSQLIGCQNPKCSWIFGP 179 (483)
Q Consensus 100 ~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~~~~~~~~~~~f~p~~SsT~~~~~c~~~~c~~~~~~ 179 (483)
.++.|+++|.||||||+ +.|+|||||+++||+|. +|..|. | .++.|+|++|+||+.+.|
T Consensus 13 ~~~~Y~~~i~iGTP~Q~-~~v~~DTGSs~lWv~~~---~C~~~~-----~-~~~~y~~~~SsT~~~~~~----------- 71 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQT-LNLDFDTGSSDLWVFSS---ETTASE-----V-XQTIYTPSKSTTAKLLSG----------- 71 (329)
T ss_dssp TCCCEEEEEEETTTTEE-EEEEEETTCCCEEECBT---TSCGGG-----C--CCCBCGGGCTTCEEEEE-----------
T ss_pred CCCEEEEEEEECCCCeE-EEEEECCCCCCeEEecC---CCCccc-----c-ccCccCCccCccceecCC-----------
Confidence 45799999999999999 99999999999999999 898763 2 368999999999998642
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcceeecccee-EEEEEEEEEEEeCCcCcCceeeeccccCC------CCCceEeecCCCC
Q 011566 180 NVESRCKGCSPRNKTCPLACPSYLLQYGLGF-TAGLLLSETLRFPSKTVPNFLAGCSILSD------RQPAGIAGFGRSS 252 (483)
Q Consensus 180 ~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~-~~G~~~~D~v~~~~~~~~~~~fg~~~~~~------~~~~GIlGLg~~~ 252 (483)
| .|.+.|++|+ +.|.+++|+|+|++.+++++.|||++... ...+||||||++.
T Consensus 72 ---------------~-----~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~ 131 (329)
T 1oew_A 72 ---------------A-----TWSISYGDGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFST 131 (329)
T ss_dssp ---------------E-----EEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGG
T ss_pred ---------------C-----eEEEEeCCCCcEEEEEEEEEEEECCEEEeeeEEEEEEecCccccccCCCceEEEecccc
Confidence 2 8999999998 99999999999999999999999998542 3459999999987
Q ss_pred CCcc-------------cccccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCCCCCCCccee
Q 011566 253 ESLP-------------SQLGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSSSAFGEFYY 319 (483)
Q Consensus 253 ~S~~-------------~Ql~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~w~ 319 (483)
++.+ +|+..++||+||.+. .+|.|+|||+|+++ +.|++.|+|+... ..+|.
T Consensus 132 ~s~~~~~~~~~~~~~l~~~i~~~~FS~~L~~~-------~~G~l~fGg~d~~~-~~g~l~~~p~~~~--------~~~~~ 195 (329)
T 1oew_A 132 LNTVSPTQQKTFFDNAKASLDSPVFTADLGYH-------APGTYNFGFIDTTA-YTGSITYTAVSTK--------QGFWE 195 (329)
T ss_dssp GCCCBSSCCCCHHHHHTTTSSSSEEEEECCSS-------SCEEEEESCCCTTS-SSSCCEEEECBCT--------TSSCE
T ss_pred ccccCcCCCCCHHHHHHHhccCcEEEEEccCC-------CCeEEEEeccChHh-cccceEEEEccCC--------CceEE
Confidence 6642 345569999999763 47899999999999 9999999999753 46899
Q ss_pred EEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccCCccCcccccC
Q 011566 320 VGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSGLRPCFDISG 399 (483)
Q Consensus 320 v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 399 (483)
|.|++|+|+++.+.. ....+||||||++++||++++++|++++.++.. ....+.+.++|+
T Consensus 196 v~l~~i~v~~~~~~~----------~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~~------~~~~g~~~~~C~---- 255 (329)
T 1oew_A 196 WTSTGYAVGSGTFKS----------TSIDGIADTGTTLLYLPATVVSAYWAQVSGAKS------SSSVGGYVFPCS---- 255 (329)
T ss_dssp EEEEEEEETTSCCEE----------EEEEEEECTTCCSEEECHHHHHHHHTTSTTCEE------ETTTTEEEEETT----
T ss_pred EEEeeEEECCeeccC----------CCceEEEeCCCCCEECCHHHHHHHHHhCCCcEE------cCCCCEEEEECC----
Confidence 999999999976531 125799999999999999999999887743221 112234567897
Q ss_pred CCccccCeEEEEEcCCcEEEcCCCCceEEeCC--ceEEEEEEecCCCCCCCCCCCceeeCccceeeeEEEEeC-CCCEEE
Q 011566 400 KKSVYLPELILKFKGGAKMALPPENYFALVGN--EVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYLEFDL-ANDRFG 476 (483)
Q Consensus 400 ~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~-~~~~ig 476 (483)
..+|+|+|+| +|++|+||+++|++...+ ...|++.++..+ ..+.||||++|||++|+|||+ +++|||
T Consensus 256 ---~~~P~i~f~f-gg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~------~~~~~iLG~~fl~~~y~vfD~~~~~riG 325 (329)
T 1oew_A 256 ---ATLPSFTFGV-GSARIVIPGDYIDFGPISTGSSSCFGGIQSSA------GIGINIFGDVALKAAFVVFNGATTPTLG 325 (329)
T ss_dssp ---CCCCCEEEEE-TTEEEEECHHHHEEEESSTTCSEEEESEEEST------TTSSEEECHHHHTTEEEEEECSSSCEEE
T ss_pred ---CCCCcEEEEE-CCEEEEECHHHeeeeecCCCCCeEEEEEEeCC------CCCceEEChHHhcCEEEEEECCCCceEE
Confidence 4579999999 899999999999887532 468999886432 235799999999999999999 999999
Q ss_pred EEeC
Q 011566 477 FAKQ 480 (483)
Q Consensus 477 fa~~ 480 (483)
||+.
T Consensus 326 fA~~ 329 (329)
T 1oew_A 326 FASK 329 (329)
T ss_dssp EEEC
T ss_pred EecC
Confidence 9974
No 22
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2.4e-55 Score=437.62 Aligned_cols=302 Identities=15% Similarity=0.221 Sum_probs=252.9
Q ss_pred ccccccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCcceec
Q 011566 90 SLIKTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCV--DCNFPNVDPSRIPAFIPKRSSSSQLIG 167 (483)
Q Consensus 90 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~--~C~~~~~~~~~~~~f~p~~SsT~~~~~ 167 (483)
.++..+|.++.+..|+++|+|| ||+ +.|+|||||+++||+|. .|. .|.. ..++.|+|++| ||+...
T Consensus 5 ~~~~~~l~n~~~~~Y~~~i~iG--~Q~-~~v~~DTGSs~lWv~~~---~C~~~~C~~-----~~~~~y~~~~S-T~~~~~ 72 (330)
T 1yg9_A 5 VPLYKLVHVFINTQYAGITKIG--NQN-FLTVFDSTSCNVVVASQ---ECVGGACVC-----PNLQKYEKLKP-KYISDG 72 (330)
T ss_dssp CCSCSCEEEEECTTSEEEEEET--TEE-EEEEEETTCCCEEEECT---TCCSGGGGS-----TTCCCCCCSSC-EEEEEE
T ss_pred eeeEeeeecCCCCEEEEEEEEC--CEE-EEEEEeCCCcceEEecC---CCCCccCcc-----cccCccCCCCC-ceEECC
Confidence 3456788888889999999999 899 99999999999999999 886 5721 33689999999 998865
Q ss_pred CCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCCcCcCceeeeccccCCC-----CC
Q 011566 168 CQNPKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPSKTVPNFLAGCSILSDR-----QP 242 (483)
Q Consensus 168 c~~~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~~~~~~~~fg~~~~~~~-----~~ 242 (483)
| .|.+.|++|++.|.+++|+|+|++.+++++.|||++.... ..
T Consensus 73 ~--------------------------------~~~i~Yg~Gs~~G~~~~Dtv~ig~~~~~~~~fg~~~~~~~~f~~~~~ 120 (330)
T 1yg9_A 73 N--------------------------------VQVKFFDTGSAVGRGIEDSLTISQLTTSQQDIVLADELSQEVCILSA 120 (330)
T ss_dssp E--------------------------------EEEEETTTEEEEEEEEEEEEEETTEEEEEEEEEEEEEECTHHHHTTC
T ss_pred C--------------------------------EEEEEECCceEEEEEEEEEEEECCEEEcCeEEEEEEEcccccccccC
Confidence 2 8999999999999999999999999999999999986531 34
Q ss_pred ceEeecCCCCCC-----------cccc--cccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCC
Q 011566 243 AGIAGFGRSSES-----------LPSQ--LGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVG 309 (483)
Q Consensus 243 ~GIlGLg~~~~S-----------~~~Q--l~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~ 309 (483)
+||||||++.++ +.+| + .++||+||.+.. ....+|.|+|||+|+++ +.|++.|+|+..
T Consensus 121 ~GilGLg~~~~s~~~~~~~~~~~l~~qg~i-~~~FS~~l~~~~---~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~---- 191 (330)
T 1yg9_A 121 DVVVGIAAPGCPNALKGKTVLENFVEENLI-APVFSIHHARFQ---DGEHFGEIIFGGSDWKY-VDGEFTYVPLVG---- 191 (330)
T ss_dssp SEEEECSCTTSCCTTSCCCHHHHHHHTTSS-CSEEEEEEEECT---TSCEEEEEEETSCCGGG-EEEEEEEEEBSC----
T ss_pred ceEEEcCcchhccccCCCCHHHHHHhcCCC-CceEEEEEcCCC---CCCCCCEEEECCcCHHH-ccCceEEEECCC----
Confidence 999999998877 2334 5 699999998741 12237899999999998 999999999984
Q ss_pred CCCCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCcccccccc-
Q 011566 310 SSSAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKK- 388 (483)
Q Consensus 310 ~~~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~- 388 (483)
..+|.|.|++|+|+++.+. .....+||||||++++||++++++|++++.+... ..+
T Consensus 192 -----~~~w~v~l~~i~v~~~~~~----------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~--------~~g~ 248 (330)
T 1yg9_A 192 -----DDSWKFRLDGVKIGDTTVA----------PAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVE--------KTTT 248 (330)
T ss_dssp -----TTSCCEECSEEEETTEEEE----------CTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEE--------ECSS
T ss_pred -----CCEEEEEeCeEEECCEEEc----------CCCcEEEEecCCccccCCHHHHHHHHHHhCCccc--------CCCc
Confidence 5799999999999998764 1136799999999999999999999998854311 122
Q ss_pred -CC-ccCcccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeCCceEEEEEEecCCCCCCCCCCCceeeCccceeeeEE
Q 011566 389 -SG-LRPCFDISGKKSVYLPELILKFKGGAKMALPPENYFALVGNEVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYL 466 (483)
Q Consensus 389 -~~-~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yv 466 (483)
.+ .++|+.. ..+|+|+|+| +|++|+||+++|+++. +..|++.++.. ..++.||||++|||++|+
T Consensus 249 ~~~~~~~C~~~-----~~~p~i~f~f-gg~~~~l~~~~y~~~~--~~~C~~~i~~~------~~~~~~ilG~~fl~~~y~ 314 (330)
T 1yg9_A 249 RRICKLDCSKI-----PSLPDVTFVI-NGRNFNISSQYYIQQN--GNLCYSGFQPC------GHSDHFFIGDFFVDHYYS 314 (330)
T ss_dssp CEEEEECGGGG-----GGSCCEEEEE-TTEEEEECHHHHEEEE--TTEEEESEEEE------TTCSSEEECHHHHTTEEE
T ss_pred eEEEEEECCCc-----cccCcEEEEE-CCEEEEECHHHhcccC--CCcEEEEEEeC------CCCCeEEecHHHhhheEE
Confidence 45 6789865 5789999999 8999999999999987 56899877642 123579999999999999
Q ss_pred EEeCCCCEEEEEeCC
Q 011566 467 EFDLANDRFGFAKQK 481 (483)
Q Consensus 467 vfD~~~~~igfa~~~ 481 (483)
|||++++|||||+++
T Consensus 315 vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 315 EFNWENKTMGFGRSV 329 (330)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEECCCCEEEEEECC
Confidence 999999999999875
No 23
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=9.8e-55 Score=447.84 Aligned_cols=300 Identities=19% Similarity=0.254 Sum_probs=253.0
Q ss_pred cccccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCcceecC
Q 011566 91 LIKTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCV--DCNFPNVDPSRIPAFIPKRSSSSQLIGC 168 (483)
Q Consensus 91 ~~~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~--~C~~~~~~~~~~~~f~p~~SsT~~~~~c 168 (483)
...+||.++.+..|+++|+||||||+ +.|++||||+++||+|. .|. .|. .++.|+|++|+||+...|
T Consensus 126 ~~~~pL~n~~d~~Y~~~I~IGTPpQ~-~~vi~DTGSs~lWV~s~---~C~s~~C~-------~~~~ydps~SsT~~~~~~ 194 (451)
T 3qvc_A 126 FDNVELKDLANVLSFGEAKLGDNGQK-FNFLFHTASSNVWVPSI---KCTSESCE-------SKNHYDSSKSKTYEKDDT 194 (451)
T ss_dssp -CCCCGGGGBCEEEEEEEEETTTTEE-EEEEEESSBCSEEEEBT---TCCSGGGT-------TSCCBCGGGCTTCEEEEE
T ss_pred CCccceeecCCCEEEEEEEECCCCcE-EEEEEcCCCccEEEecC---CCCccccC-------CCCCCCCCCCcccccCCC
Confidence 45678998888999999999999999 99999999999999999 884 564 478999999999998663
Q ss_pred CCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCCcCcCceeeecccc----C----CC
Q 011566 169 QNPKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPSKTVPNFLAGCSIL----S----DR 240 (483)
Q Consensus 169 ~~~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~~~~~~~~fg~~~~----~----~~ 240 (483)
.|.+.||+|++.|.+++|+|+|++.+++ +.|||+.. . ..
T Consensus 195 --------------------------------~f~i~YgdGs~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~f~~~ 241 (451)
T 3qvc_A 195 --------------------------------PVKLTSKAGTISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPFYSES 241 (451)
T ss_dssp --------------------------------EEEEECSSEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTHHHHS
T ss_pred --------------------------------EEEEEECCCEEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCCccCC
Confidence 8999999999999999999999999999 99999986 2 23
Q ss_pred CCceEeecCCCCCCc----------ccc--cccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCC
Q 011566 241 QPAGIAGFGRSSESL----------PSQ--LGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPV 308 (483)
Q Consensus 241 ~~~GIlGLg~~~~S~----------~~Q--l~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~ 308 (483)
..+||||||++.++. .+| +..++||+||.+. ...+|.|+|||+|+++ +.|+++|+|+..
T Consensus 242 ~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~-----~~~~G~l~fGgiD~s~-y~G~l~~~pv~~--- 312 (451)
T 3qvc_A 242 DVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPE-----NKNKGYLTIGGIEERF-FDGPLNYEKLNH--- 312 (451)
T ss_dssp CCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTT-----CTTEEEEEESSCCGGG-EEEEEEEEECSS---
T ss_pred CCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCC-----CCCCCEEEECCcchhh-cCCceEEEEccc---
Confidence 349999999987652 233 4458999999885 2357999999999999 999999999985
Q ss_pred CCCCCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCcccccccc
Q 011566 309 GSSSAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKK 388 (483)
Q Consensus 309 ~~~~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~ 388 (483)
..+|.|.++ |+|+++ . .....+||||||++++||++++++|++++++... ...+
T Consensus 313 ------~~~w~v~l~-I~Vgg~-~-----------~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~-------~~~g 366 (451)
T 3qvc_A 313 ------DLMWQVDLD-VHFGNV-S-----------SKKANVILDSATSVITVPTEFFNQFVESASVFKV-------PFLS 366 (451)
T ss_dssp ------TTSSEEEEE-EEETTE-E-----------EEEEEEEECTTBSSEEECHHHHHHHHTTTTCEEC-------TTSS
T ss_pred ------CCeeEEEEE-EEECCc-c-----------CCCceEEEeCCCccccCCHHHHHHHHHHcCCeec-------CCCC
Confidence 579999999 999998 1 1126799999999999999999999988854321 1235
Q ss_pred CCccCcccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeCC--ceEEEEEEecCCCCCCCCCCCceeeCccceeeeEE
Q 011566 389 SGLRPCFDISGKKSVYLPELILKFKGGAKMALPPENYFALVGN--EVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYL 466 (483)
Q Consensus 389 ~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yv 466 (483)
.+.++|. . ..+|+|+|+| +|++++||+++|+.+... +..|++.+...+. ..+.||||++|||++|+
T Consensus 367 ~y~v~C~-~-----~~~P~itf~f-gg~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~-----~~~~~ILG~~FLr~~Yv 434 (451)
T 3qvc_A 367 LYVTTCG-N-----TKLPTLEYRS-PNKVYTLEPKQYLEPLENIFSALCMLNIVPIDL-----EKNTFVLGDPFMRKYFT 434 (451)
T ss_dssp CEEEETT-C-----TTCCCEEEEE-TTEEEEECHHHHEEECTTTSTTEEEECEEECCC-----STTEEEECHHHHHHEEE
T ss_pred eEEeeCC-c-----CcCCcEEEEE-CCEEEEEcHHHheeecccCCCCeEEEEEEeCCC-----CCCCEEECHHHhhcEEE
Confidence 5678887 3 6789999999 899999999999998652 5689998875431 14579999999999999
Q ss_pred EEeCCCCEEEEEeCC
Q 011566 467 EFDLANDRFGFAKQK 481 (483)
Q Consensus 467 vfD~~~~~igfa~~~ 481 (483)
|||++++|||||+++
T Consensus 435 VfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 435 VYDYDNHTVGFALAK 449 (451)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEECCCCEEEEEEcc
Confidence 999999999999975
No 24
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=5.1e-55 Score=449.34 Aligned_cols=298 Identities=20% Similarity=0.308 Sum_probs=250.7
Q ss_pred ccccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCcceecCC
Q 011566 92 IKTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCV--DCNFPNVDPSRIPAFIPKRSSSSQLIGCQ 169 (483)
Q Consensus 92 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~--~C~~~~~~~~~~~~f~p~~SsT~~~~~c~ 169 (483)
...+|.++.++.|+++|+||||||+ +.|+|||||+++||+|. +|. .| ..++.|+|++|+||+...|
T Consensus 128 ~~~~L~n~~~~~Y~~~I~IGTP~Q~-~~vi~DTGSs~lWV~~~---~C~~~~C-------~~~~~ydps~SsT~~~~~~- 195 (453)
T 2bju_A 128 DNIELVDFQNIMFYGDAEVGDNQQP-FTFILDTGSANLWVPSV---KCTTAGC-------LTKHLYDSSKSRTYEKDGT- 195 (453)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEE-EEEEEETTCCCEEEEBT---TCCSTTG-------GGSCCBCGGGCTTCEEEEE-
T ss_pred CceeeEecCCCEEEEEEEECCCCeE-EEEEEECCCcceEEecc---CCCcccc-------CCCCcCCCccCCceeECCc-
Confidence 4577888788999999999999999 99999999999999999 886 45 4478999999999998763
Q ss_pred CcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCCcCcCceeeeccccCC--------CC
Q 011566 170 NPKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPSKTVPNFLAGCSILSD--------RQ 241 (483)
Q Consensus 170 ~~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~~~~~~~~fg~~~~~~--------~~ 241 (483)
.|.+.||+|++.|.+++|+|++++.+++ +.|||++... ..
T Consensus 196 -------------------------------~~~i~YgdGs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~ 243 (453)
T 2bju_A 196 -------------------------------KVEMNYVSGTVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTAST 243 (453)
T ss_dssp -------------------------------EEEEECSSSEEEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSS
T ss_pred -------------------------------EEEEEcCCCCeEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccC
Confidence 8999999999999999999999999999 9999998654 23
Q ss_pred CceEeecCCCCCCcc----------cc--cccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCC
Q 011566 242 PAGIAGFGRSSESLP----------SQ--LGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVG 309 (483)
Q Consensus 242 ~~GIlGLg~~~~S~~----------~Q--l~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~ 309 (483)
.+||||||++.++.. +| +..++||+||.+. ...+|.|+|||+|+++ +.|++.|+|+..
T Consensus 244 ~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~-----~~~~G~l~fGg~D~~~-y~G~l~~~pv~~---- 313 (453)
T 2bju_A 244 FDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVH-----DKHTGFLTIGGIEERF-YEGPLTYEKLNH---- 313 (453)
T ss_dssp CCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBT-----TTBCEEEEESSCCGGG-EEEEEEEEEEEE----
T ss_pred CceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeCCC-----CCCCeEEEECCCCHHH-cCCceEEEecCC----
Confidence 599999999876643 33 4458999999874 2357999999999988 999999999986
Q ss_pred CCCCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCcccccccc-
Q 011566 310 SSSAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKK- 388 (483)
Q Consensus 310 ~~~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~- 388 (483)
..+|.|.++ |+|++ .+ + ....+||||||++++||++++++|++++.+. +...+
T Consensus 314 -----~~~w~V~l~-I~Vgg-~~-~----------~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~--------~~~~g~ 367 (453)
T 2bju_A 314 -----DLYWQITLD-AHVGN-IM-L----------EKANCIVDSGTSAITVPTDFLNKMLQNLDVI--------KVPFLP 367 (453)
T ss_dssp -----ETTEEEEEE-EEETT-EE-E----------EEEEEEECTTCCSEEECHHHHHHHTTTSSCE--------ECTTSS
T ss_pred -----CceEEEEEE-EEECc-EE-e----------ccccEEEcCCCCeEecCHHHHHHHHHHhCCc--------ccCCCc
Confidence 569999999 99999 32 1 1267999999999999999999998776442 11223
Q ss_pred CCccCcccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeCC--ceEEEEEEecCCCCCCCCCCCceeeCccceeeeEE
Q 011566 389 SGLRPCFDISGKKSVYLPELILKFKGGAKMALPPENYFALVGN--EVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYL 466 (483)
Q Consensus 389 ~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yv 466 (483)
.+.++|+. ..+|+|+|+| +|++|+||+++|+++... ...|+..+...+. ..+.||||++|||++|+
T Consensus 368 ~~~v~C~~------~~~P~itf~f-gg~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~-----~~~~~ILGd~Flr~~yv 435 (453)
T 2bju_A 368 FYVTLCNN------SKLPTFEFTS-ENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLDF-----PVPTFILGDPFMRKYFT 435 (453)
T ss_dssp CEEEETTC------TTCCCEEEEC-SSCEEEECHHHHEEECTTTSTTEEEECEEECCC-----SSCEEEECHHHHHHEEE
T ss_pred eEEEecCC------CCCCcEEEEE-CCEEEEECHHHhEeecccCCCceEEEEEEeCCC-----CCCCEEECHHHhhcEEE
Confidence 46678875 4679999999 899999999999998753 4589988765431 12479999999999999
Q ss_pred EEeCCCCEEEEEeCC
Q 011566 467 EFDLANDRFGFAKQK 481 (483)
Q Consensus 467 vfD~~~~~igfa~~~ 481 (483)
|||++++|||||+++
T Consensus 436 VFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 436 VFDYDNHSVGIALAK 450 (453)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEECCCCEEEEEEcc
Confidence 999999999999874
No 25
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=4e-54 Score=447.03 Aligned_cols=322 Identities=22% Similarity=0.285 Sum_probs=250.8
Q ss_pred cccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceecCCCcC
Q 011566 93 KTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNFPNVDPSRIPAFIPKRSSSSQLIGCQNPK 172 (483)
Q Consensus 93 ~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~~~~~~~~~~~f~p~~SsT~~~~~c~~~~ 172 (483)
...+....+..|+++|+||||||+ ++|+|||||+++||+|. +| | +.++.|+|++|+||+...|
T Consensus 65 ~~~l~~~~~~~Y~~~i~iGTP~Q~-~~v~~DTGSs~lWV~~~---~c--c-------~~~~~y~~~~SsT~~~~~~---- 127 (455)
T 3lpj_A 65 VDNLRGKSGQGYYVEMTVGSPPQT-LNILVDTGSSNFAVGAA---PH--P-------FLHRYYQRQLSSTYRDLRK---- 127 (455)
T ss_dssp TTCEEEETTTEEEEEEEETTTTEE-EEEEEETTCCCEEEECS---CC--T-------TCSCCCCGGGCTTCEEEEE----
T ss_pred cccccCCCCCEEEEEEEECCCCeE-EEEEEcCCCcceEEecc---cc--c-------ccCCcccCCCCCCcccCCc----
Confidence 334444555689999999999999 99999999999999998 77 4 2378999999999998764
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCC-cCcC-ceeeeccccCC------CCCce
Q 011566 173 CSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPS-KTVP-NFLAGCSILSD------RQPAG 244 (483)
Q Consensus 173 c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~-~~~~-~~~fg~~~~~~------~~~~G 244 (483)
.|.+.|++|++.|.+++|+|+|++ ..+. .+.|+++.... ...+|
T Consensus 128 ----------------------------~~~i~Yg~Gs~~G~~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dG 179 (455)
T 3lpj_A 128 ----------------------------GVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEG 179 (455)
T ss_dssp ----------------------------EEEEECSSCEEEEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCE
T ss_pred ----------------------------cEEEEeCCeEEEEEEEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcce
Confidence 899999999999999999999985 3333 35678765321 23499
Q ss_pred EeecCCCCCCcc------------ccccc-ceeeeecccCcCCC-----CCCccceEEccCCCCCCCCCCCceeeeceeC
Q 011566 245 IAGFGRSSESLP------------SQLGL-KKFSYCLLSRKFDD-----APVSSNLVLDTGPGSGDSKTPGLSYTPFYKN 306 (483)
Q Consensus 245 IlGLg~~~~S~~------------~Ql~~-~~Fs~~L~~~~~~~-----~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~ 306 (483)
|||||++.++.. +|... ++||+||.+..... ....+|.|+|||+|+++ +.|++.|+|+..
T Consensus 180 IlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~- 257 (455)
T 3lpj_A 180 ILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSL-YTGSLWYTPIRR- 257 (455)
T ss_dssp EEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGG-EEEEEEEEECCS-
T ss_pred EEEeCccccccccCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCccc-ccCceEEEecCC-
Confidence 999999876542 23222 69999997632110 02357899999999999 999999999986
Q ss_pred CCCCCCCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCcccccc
Q 011566 307 PVGSSSAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVE 386 (483)
Q Consensus 307 ~~~~~~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~ 386 (483)
..+|.|.+++|+|+++.+.++...+ +...+||||||++++||++++++|+++|.+.... .......
T Consensus 258 --------~~~w~v~l~~i~v~g~~~~~~~~~~-----~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~-~~~~~~~ 323 (455)
T 3lpj_A 258 --------EWYYEVIIVRVEINGQDLKMDCKEY-----NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST-EKFPDGF 323 (455)
T ss_dssp --------BTTBBCCEEEEEETTEECCCCGGGG-----GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTT-SCCCHHH
T ss_pred --------CceeEEEEeEEEECCEEcccccccc-----CCCeEEEECCCcceeCCHHHHHHHHHHhhhhccc-cccCccc
Confidence 5789999999999999987654432 1367999999999999999999999999987541 1111111
Q ss_pred ccCCccCcccccCCCccccCeEEEEEcCCc-----EEEcCCCCceEEeCCc----eEEEEE-EecCCCCCCCCCCCceee
Q 011566 387 KKSGLRPCFDISGKKSVYLPELILKFKGGA-----KMALPPENYFALVGNE----VLCLIL-FTDNAAGPALGRGPAIIL 456 (483)
Q Consensus 387 ~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~-----~~~l~~~~y~~~~~~~----~~C~~~-i~~~~~~~~~~~~~~~Il 456 (483)
...+.++|+.........+|+|+|+|.|+. +|+|++++|+.+..+. ..|+++ +.. ..+.|||
T Consensus 324 ~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~--------~~~~~IL 395 (455)
T 3lpj_A 324 WLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ--------SSTGTVM 395 (455)
T ss_dssp HTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEE--------ESSCEEE
T ss_pred ccCcceecccccCCchhcCCcEEEEEcCCCcCceEEEEECHHHheEeccCCCCCCceEEEEeccC--------CCCcEEE
Confidence 123468999875444456899999994432 5999999999986542 589973 221 1246999
Q ss_pred CccceeeeEEEEeCCCCEEEEEeCCCC
Q 011566 457 GDFQLQNFYLEFDLANDRFGFAKQKCA 483 (483)
Q Consensus 457 G~~fl~~~yvvfD~~~~~igfa~~~C~ 483 (483)
|++|||++|+|||++++|||||+++|+
T Consensus 396 G~~fl~~~yvvfD~~~~rIGfA~~~c~ 422 (455)
T 3lpj_A 396 GAVIMEGFYVVFDRARKRIGFAVSACH 422 (455)
T ss_dssp CHHHHTTEEEEEETTTTEEEEEEETTC
T ss_pred ChHHhCCeEEEEECCCCEEEEEecccc
Confidence 999999999999999999999999995
No 26
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=5.2e-54 Score=437.14 Aligned_cols=321 Identities=21% Similarity=0.295 Sum_probs=249.0
Q ss_pred ccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceecCCCcCC
Q 011566 94 TPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNFPNVDPSRIPAFIPKRSSSSQLIGCQNPKC 173 (483)
Q Consensus 94 ~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~~~~~~~~~~~f~p~~SsT~~~~~c~~~~c 173 (483)
.+|.+..+..|+++|+||||||+ +.|+|||||+++||+|. +|..| ++.|+|++|+||+...|
T Consensus 5 ~~l~~~~~~~Y~~~i~iGTP~q~-~~v~~DTGSs~lWv~~~---~c~~~---------~~~f~~~~SsT~~~~~~----- 66 (383)
T 2ewy_A 5 DNLQGDSGRGYYLEMLIGTPPQK-LQILVDTGSSNFAVAGT---PHSYI---------DTYFDTERSSTYRSKGF----- 66 (383)
T ss_dssp TCEEEETTTEEEEEEEETTTTEE-EEEEEETTCCCEEEECS---CBTTB---------SCCCCGGGCTTCEEEEE-----
T ss_pred eeccCCCCCcEEEEEEecCCCce-EEEEEecCCCceEEecC---CCCcc---------ccCcccccCccceeCCc-----
Confidence 34555566789999999999999 99999999999999998 88766 57899999999998764
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCCcCcC--ceeeeccccCC------CCCceE
Q 011566 174 SWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPSKTVP--NFLAGCSILSD------RQPAGI 245 (483)
Q Consensus 174 ~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~~~~~--~~~fg~~~~~~------~~~~GI 245 (483)
.|.+.|++|++.|.+++|+|+|++.... .+.|++..... ...+||
T Consensus 67 ---------------------------~~~i~Yg~Gs~~G~~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGi 119 (383)
T 2ewy_A 67 ---------------------------DVTVKYTQGSWTGFVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGI 119 (383)
T ss_dssp ---------------------------EEEEECSSCEEEEEEEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEE
T ss_pred ---------------------------eEEEEECCcEEEEEEEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceE
Confidence 8999999999999999999999874322 35677754321 234999
Q ss_pred eecCCCCCCc------------ccccc-cceeeeecccCcC--CCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCC
Q 011566 246 AGFGRSSESL------------PSQLG-LKKFSYCLLSRKF--DDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGS 310 (483)
Q Consensus 246 lGLg~~~~S~------------~~Ql~-~~~Fs~~L~~~~~--~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~ 310 (483)
||||++.++. .+|.. .++||+||.+... ++....+|.|+|||+|+++ +.|+++|+|+..
T Consensus 120 lGLg~~~~s~~~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~----- 193 (383)
T 2ewy_A 120 LGLAYATLAKPSSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSL-YKGDIWYTPIKE----- 193 (383)
T ss_dssp EECSCGGGCSSCTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGG-CCSCEEEEECSS-----
T ss_pred EecCchhcccccccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhh-ccCccEEEecCC-----
Confidence 9999987653 34433 3799999975211 1123357899999999998 999999999986
Q ss_pred CCCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccCC
Q 011566 311 SSAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSG 390 (483)
Q Consensus 311 ~~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 390 (483)
..+|.|.|++|+|+++.+.++...+. ...+||||||++++||+++|++|++++.+.... ..........+
T Consensus 194 ----~~~~~v~l~~i~v~g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~-~~~~~~~~~~~ 263 (383)
T 2ewy_A 194 ----EWYYQIEILKLEIGGQSLNLDCREYN-----ADKAIVDSGTTLLRLPQKVFDAVVEAVARASLI-PEFSDGFWTGS 263 (383)
T ss_dssp ----BTTBBCCEEEEEETTEECCCCTTTTT-----SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCS-SCCCHHHHHTS
T ss_pred ----CceEEEEEEEEEECCEEccccccccC-----CccEEEEcCCccccCCHHHHHHHHHHHhhhccc-ccCcccccccc
Confidence 46899999999999999876544321 367999999999999999999999999876431 11100000134
Q ss_pred ccCcccccCCCccccCeEEEEEcCC-----cEEEcCCCCceEEeC---CceEEEEE-EecCCCCCCCCCCCceeeCccce
Q 011566 391 LRPCFDISGKKSVYLPELILKFKGG-----AKMALPPENYFALVG---NEVLCLIL-FTDNAAGPALGRGPAIILGDFQL 461 (483)
Q Consensus 391 ~~~C~~~~~~~~~~~P~i~f~f~gg-----~~~~l~~~~y~~~~~---~~~~C~~~-i~~~~~~~~~~~~~~~IlG~~fl 461 (483)
.++|+..+......+|+|+|+|.|+ .+|+||+++|+.+.. .+..|+++ +... ...||||+.||
T Consensus 264 ~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~--------~~~~ILG~~fl 335 (383)
T 2ewy_A 264 QLACWTNSETPWSYFPKISIYLRDENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPS--------TNALVIGATVM 335 (383)
T ss_dssp EEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEE--------SSCEEECHHHH
T ss_pred ccccccCCcccHhhCCcEEEEECCCCCCceEEEEEChHHheeecccCCCCceeEEEEecCC--------CCcEEEChHHh
Confidence 6899976543345789999999543 379999999998763 25689863 4321 23599999999
Q ss_pred eeeEEEEeCCCCEEEEEeCCCC
Q 011566 462 QNFYLEFDLANDRFGFAKQKCA 483 (483)
Q Consensus 462 ~~~yvvfD~~~~~igfa~~~C~ 483 (483)
|++|+|||++++|||||+++|+
T Consensus 336 ~~~yvvfD~~~~rIGfA~~~c~ 357 (383)
T 2ewy_A 336 EGFYVIFDRAQKRVGFAASPCA 357 (383)
T ss_dssp TTEEEEEETTTTEEEEEECTTC
T ss_pred CCeeEEEECCCCeEEEEeccCC
Confidence 9999999999999999999994
No 27
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.8e-54 Score=430.16 Aligned_cols=291 Identities=19% Similarity=0.238 Sum_probs=241.5
Q ss_pred CcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceecCCCcCCCCCCCC
Q 011566 100 SYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNFPNVDPSRIPAFIPKRSSSSQLIGCQNPKCSWIFGP 179 (483)
Q Consensus 100 ~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~~~~~~~~~~~f~p~~SsT~~~~~c~~~~c~~~~~~ 179 (483)
.+..|+++|+|| ||+ +.|+|||||+++||+|. +|..|. |+.++.|+|++|+ ++...|
T Consensus 13 ~~~~Y~~~i~iG--~q~-~~v~~DTGSs~lWv~~~---~C~~~~-----c~~~~~y~~~~Ss-~~~~~~----------- 69 (323)
T 1izd_A 13 NDEEYITQVTVG--DDT-LGLDFDTGSADLWVFSS---QTPSSE-----RSGHDYYTPGSSA-QKIDGA----------- 69 (323)
T ss_dssp GGCCEEEEEEET--TEE-EEEEEETTCCCEEECBT---TSCHHH-----HTTCCCBCCCTTC-EEEEEE-----------
T ss_pred CCCEEEEEEEEC--CEE-EEEEEcCCCcceEEecC---CCCccc-----ccCCCCCCccccC-CccCCC-----------
Confidence 458999999999 799 99999999999999999 897753 2447899999998 554332
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcceeecccee-EEEEEEEEEEEeCCcCcCceeeeccccCC------CCCceEeecCCCC
Q 011566 180 NVESRCKGCSPRNKTCPLACPSYLLQYGLGF-TAGLLLSETLRFPSKTVPNFLAGCSILSD------RQPAGIAGFGRSS 252 (483)
Q Consensus 180 ~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~-~~G~~~~D~v~~~~~~~~~~~fg~~~~~~------~~~~GIlGLg~~~ 252 (483)
.|.+.|++|+ +.|.+++|+|+|++.+++++.|||++... ...+||||||++.
T Consensus 70 ---------------------~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~ 128 (323)
T 1izd_A 70 ---------------------TWSISYGDGSSASGDVYKDKVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSS 128 (323)
T ss_dssp ---------------------EEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGG
T ss_pred ---------------------eEEEEcCCCCeEEEEEEEEEEEECCEEECceEEEEEEeccccccccCCCceEEecCccc
Confidence 8999999998 99999999999999999999999998543 3459999999987
Q ss_pred CCcc-------------cccccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCCCCCCCccee
Q 011566 253 ESLP-------------SQLGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSSSAFGEFYY 319 (483)
Q Consensus 253 ~S~~-------------~Ql~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~w~ 319 (483)
++.. +|+..++||+||.++ .+|.|+|||+|+++ +.|++.|+|+... ..+|.
T Consensus 129 ~s~~~p~~~~~~~~~l~~~i~~~~FS~~L~~~-------~~G~l~fGg~d~~~-~~g~l~~~p~~~~--------~~~w~ 192 (323)
T 1izd_A 129 INTVQPTPQKTFFDNVKSSLSEPIFAVALKHN-------APGVYDFGYTDSSK-YTGSITYTDVDNS--------QGFWG 192 (323)
T ss_dssp GCCCBSSCCCCHHHHHGGGSSSSEEEEECCTT-------SCEEEEESSCCTTS-EEEEEEEEECBCT--------TSSCE
T ss_pred ccccCCCCCCCHHHHHHHhccCcEEEEEccCC-------CCCEEEECCcCccc-cccceEEEECCCC--------CceEE
Confidence 6642 456679999999863 47899999999999 9999999999743 46899
Q ss_pred EEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccCCccCcccccC
Q 011566 320 VGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSGLRPCFDISG 399 (483)
Q Consensus 320 v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 399 (483)
|++++|+|++ .+. .....+||||||++++||++++++|++++.++.. ....+.+.++|+
T Consensus 193 v~l~~i~v~~-~~~----------~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~~------~~~~g~~~~~C~---- 251 (323)
T 1izd_A 193 FTADGYSIGS-DSS----------SDSITGIADTGTTLLLLDDSIVDAYYEQVNGASY------DSSQGGYVFPSS---- 251 (323)
T ss_dssp EEESEEEETT-EEE----------CCCEEEEECTTCCSEEECHHHHHHHHTTSTTCEE------ETTTTEEEEETT----
T ss_pred EEECeEEECC-ccc----------CCCceEEEeCCCcceeCCHHHHHHHHHhCCCcEE------cCcCCEEEEECC----
Confidence 9999999999 442 1236799999999999999999999888743211 112244567887
Q ss_pred CCccccCeEEEEEcCCcEEEcCCCCceEEeCCceEEEEEEecCCCCCCCCCCCceeeCccceeeeEEEEeCCCCEEEEEe
Q 011566 400 KKSVYLPELILKFKGGAKMALPPENYFALVGNEVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYLEFDLANDRFGFAK 479 (483)
Q Consensus 400 ~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~~igfa~ 479 (483)
..+|+|+|+| +|++|+||+++|++...++..|++.++..+ ..+.||||++|||++|+|||++++|||||+
T Consensus 252 ---~~~P~i~f~f-gg~~~~i~~~~~~~~~~~~~~C~~~i~~~~------~~~~~IlG~~fl~~~y~vfD~~~~riGfA~ 321 (323)
T 1izd_A 252 ---ASLPDFSVTI-GDYTATVPGEYISFADVGNGQTFGGIQSNS------GIGFSIFGDVFLKSQYVVFDASGPRLGFAA 321 (323)
T ss_dssp ---CCCCCEEEEE-TTEEEEECHHHHEEEECSTTEEEESEEECT------TTSSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred ---CCCceEEEEE-CCEEEecCHHHeEEecCCCCeEEEEEEcCC------CCCcEEEChHHhcCEEEEEECCCCEEEEee
Confidence 3679999999 899999999999987655678999776432 235799999999999999999999999998
Q ss_pred CC
Q 011566 480 QK 481 (483)
Q Consensus 480 ~~ 481 (483)
++
T Consensus 322 ~a 323 (323)
T 1izd_A 322 QA 323 (323)
T ss_dssp EC
T ss_pred CC
Confidence 64
No 28
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=3.1e-54 Score=428.86 Aligned_cols=292 Identities=20% Similarity=0.249 Sum_probs=241.3
Q ss_pred CcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceecCCCcCCCCCCCC
Q 011566 100 SYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNFPNVDPSRIPAFIPKRSSSSQLIGCQNPKCSWIFGP 179 (483)
Q Consensus 100 ~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~~~~~~~~~~~f~p~~SsT~~~~~c~~~~c~~~~~~ 179 (483)
.++.|+++|+|| ||+ +.|+|||||+++||+|. +|..|. |+.++.|+|++|+ ++...
T Consensus 12 ~~~~Y~~~i~iG--~Q~-~~v~~DTGSs~lWv~~~---~C~~~~-----c~~~~~y~~~~Ss-~~~~~------------ 67 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KST-LHLDFDTGSADLWVFSD---ELPSSE-----QTGHDLYTPSSSA-TKLSG------------ 67 (325)
T ss_dssp TTSCEEEEEEEB--TEE-EEEEEETTCCCEEEECT---TSCHHH-----HTTSCCCBCCSSC-EECTT------------
T ss_pred CCCEEEEEEEEC--CEE-EEEEEeCCCccceEeeC---CCCccc-----cCCCCCCCchhcC-CccCC------------
Confidence 458999999999 899 99999999999999999 898763 2457899999988 44222
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcceeecccee-EEEEEEEEEEEeCCcCcCceeeeccccCC------CCCceEeecCCCC
Q 011566 180 NVESRCKGCSPRNKTCPLACPSYLLQYGLGF-TAGLLLSETLRFPSKTVPNFLAGCSILSD------RQPAGIAGFGRSS 252 (483)
Q Consensus 180 ~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~-~~G~~~~D~v~~~~~~~~~~~fg~~~~~~------~~~~GIlGLg~~~ 252 (483)
| .|.+.|++|+ +.|.+++|+|+|++.+++++.|||++... ...+||||||++.
T Consensus 68 ---------------~-----~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~ 127 (325)
T 1ibq_A 68 ---------------Y-----SWDISYGDGSSASGDVYRDTVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSS 127 (325)
T ss_dssp ---------------C-----BEEEECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGG
T ss_pred ---------------C-----EEEEEeCCCCEEEEEEEEeEEEECCEEEcceEEEEEEecCccccccCCCceEEEeCccc
Confidence 2 9999999998 99999999999999999999999998542 2459999999987
Q ss_pred CCc-------------ccccccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCCCCCCCccee
Q 011566 253 ESL-------------PSQLGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSSSAFGEFYY 319 (483)
Q Consensus 253 ~S~-------------~~Ql~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~w~ 319 (483)
++. .+|+..++||+||.++ .+|.|+|||+|+++ +.|++.|+|+... ..+|.
T Consensus 128 ~s~~~p~~~~~~~~~l~~~i~~~~FS~~l~~~-------~~G~l~fGg~d~~~-~~g~l~~~p~~~~--------~~~w~ 191 (325)
T 1ibq_A 128 INTVQPKAQTTFFDTVKSQLDSPLFAVQLKHD-------APGVYDFGYIDDSK-YTGSITYTDADSS--------QGYWG 191 (325)
T ss_dssp GCCCBSSCCCCHHHHHGGGSSSSEEEEEEETT-------EEEEEEESSCCGGG-BSSCCEEEECBCT--------TSSCE
T ss_pred ccccCcCCCCCHHHHHHHhcCCcEEEEEecCC-------CCceEEECCcChhh-ccCceEEEEcCCC--------CceEE
Confidence 654 2455569999999863 47899999999998 9999999999753 46899
Q ss_pred EEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccCCccCcccccC
Q 011566 320 VGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSGLRPCFDISG 399 (483)
Q Consensus 320 v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 399 (483)
|+|++|+|+++.+. .....+||||||++++||++++++|++++.++.. ....+.+.++|+
T Consensus 192 v~l~~i~v~~~~~~----------~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~------~~~~g~~~~~C~---- 251 (325)
T 1ibq_A 192 FSTDGYSIGDGSSS----------SSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQE------SYEAGGYVFSCS---- 251 (325)
T ss_dssp EEECEEEETTSCCB----------SCCEEEEECTTCCSEEECHHHHHHHHTTSTTCBC------CSSSSSCEEETT----
T ss_pred EEECcEEECCeecc----------CCCceEEEeCCCCcEeCCHHHHHHHHHhCCCceE------cCcCCeEEEEcC----
Confidence 99999999997653 1236799999999999999999999888743211 112345667897
Q ss_pred CCccccCeEEEEEcCCcEEEcCCCCceEEeCC--ceEEEEEEecCCCCCCCCCCCceeeCccceeeeEEEEeCCCCEEEE
Q 011566 400 KKSVYLPELILKFKGGAKMALPPENYFALVGN--EVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYLEFDLANDRFGF 477 (483)
Q Consensus 400 ~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~~igf 477 (483)
..+|+|+|+| +|++|+||+++|+....+ ...|++.++..+ ..+.||||++|||++|+|||++++||||
T Consensus 252 ---~~~P~i~f~f-gg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~------~~~~~iLG~~fl~~~y~vfD~~~~~igf 321 (325)
T 1ibq_A 252 ---TDLPDFTVVI-GDYKAVVPGKYINYAPVSTGSSTCYGGIQSNS------GLGLSILGDVFLKSQYVVFNSEGPKLGF 321 (325)
T ss_dssp ---CCCCCEEEEE-TTEEEEECHHHHEEEESSTTCSEEEESEEECT------TTCSEEECHHHHTTEEEEEETTTTEEEE
T ss_pred ---CCCCcEEEEE-CCEEEEECHHHhcccccCCCCCeEEEEEEcCC------CCCceEEChHHhcCEEEEEECCCCEEEe
Confidence 3579999999 899999999999987532 368999876432 2357999999999999999999999999
Q ss_pred EeCC
Q 011566 478 AKQK 481 (483)
Q Consensus 478 a~~~ 481 (483)
|+++
T Consensus 322 A~~~ 325 (325)
T 1ibq_A 322 AAQA 325 (325)
T ss_dssp EEBC
T ss_pred eeCC
Confidence 9874
No 29
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=2.9e-53 Score=433.22 Aligned_cols=320 Identities=22% Similarity=0.274 Sum_probs=248.8
Q ss_pred cccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceecCCCcCCC
Q 011566 95 PLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNFPNVDPSRIPAFIPKRSSSSQLIGCQNPKCS 174 (483)
Q Consensus 95 ~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~~~~~~~~~~~f~p~~SsT~~~~~c~~~~c~ 174 (483)
+|....+..|+++|+||||||+ +.|+|||||+++||+|. +|..| ++.|+|++|+||+...|
T Consensus 14 ~l~~~~~~~Y~~~i~iGTP~Q~-~~v~~DTGSs~lWv~~~---~c~~~---------~~~y~~~~SsT~~~~~~------ 74 (395)
T 2qp8_A 14 NLRGKSGQGYYVEMTVGSPPQT-LNILVDTGSSNFAVGAA---PHPFL---------HRYYQRQLSSTYRDLRK------ 74 (395)
T ss_dssp CEEEETTTEEEEEEEETTTTEE-EEEEEETTCCCEEEECS---CCTTC---------SCCCCGGGCTTCEEEEE------
T ss_pred ecCCCCCceEEEEEEecCCCce-EEEEEecCCCceEEECC---CCccc---------cCCcCcccCCCceeCCc------
Confidence 4444456789999999999999 99999999999999998 78654 57899999999998764
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeC-CcCcC-ceeeeccccC------CCCCceEe
Q 011566 175 WIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFP-SKTVP-NFLAGCSILS------DRQPAGIA 246 (483)
Q Consensus 175 ~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~-~~~~~-~~~fg~~~~~------~~~~~GIl 246 (483)
.|.+.|++|++.|.+++|+|+|+ +..+. .+.|++.... ....+|||
T Consensus 75 --------------------------~~~i~Yg~Gs~~G~~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~f~~~~~~dGIl 128 (395)
T 2qp8_A 75 --------------------------GVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGIL 128 (395)
T ss_dssp --------------------------EEEEECSSCEEEEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEE
T ss_pred --------------------------eEEEEECCcEEEEEEEeEEEEECCCCCceEEEEEEEEEccCcccccccCccceE
Confidence 89999999999999999999998 55554 3567765432 12349999
Q ss_pred ecCCCCCCc------------cccccc-ceeeeecccCcCCC-----CCCccceEEccCCCCCCCCCCCceeeeceeCCC
Q 011566 247 GFGRSSESL------------PSQLGL-KKFSYCLLSRKFDD-----APVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPV 308 (483)
Q Consensus 247 GLg~~~~S~------------~~Ql~~-~~Fs~~L~~~~~~~-----~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~ 308 (483)
|||+..++. .+|... ++||+||.+..... ....+|.|+|||+|+++ +.|+++|+|+..
T Consensus 129 GLg~~~~s~~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~--- 204 (395)
T 2qp8_A 129 GLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSL-YTGSLWYTPIRR--- 204 (395)
T ss_dssp ECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGG-EEEEEEEEECCS---
T ss_pred EcCchhhccCCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCccc-ccCceEEeccCC---
Confidence 999987643 334322 79999997631110 01357899999999988 999999999976
Q ss_pred CCCCCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCcccccccc
Q 011566 309 GSSSAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKK 388 (483)
Q Consensus 309 ~~~~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~ 388 (483)
..+|.|.|++|+|+++.+.++...+. ...+||||||++++||+++|++|++++.+.... .........
T Consensus 205 ------~~~~~v~l~~i~v~g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~-~~~~~~~~~ 272 (395)
T 2qp8_A 205 ------EWYYEVIIVRVEINGQDLKMDCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST-EKFPDGFWL 272 (395)
T ss_dssp ------BTTBBCCEEEEEETTEECCCCGGGGG-----SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTT-SCCCHHHHT
T ss_pred ------CceEEEEEEEEEECCEEcccCccccC-----CceEEEEcCCCcEecCHHHHHHHHHHHhhhccc-ccCCccccc
Confidence 46899999999999999876554331 257999999999999999999999999887542 110000001
Q ss_pred CCccCcccccCCCccccCeEEEEEcCCc-----EEEcCCCCceEEeCC----ceEEEE-EEecCCCCCCCCCCCceeeCc
Q 011566 389 SGLRPCFDISGKKSVYLPELILKFKGGA-----KMALPPENYFALVGN----EVLCLI-LFTDNAAGPALGRGPAIILGD 458 (483)
Q Consensus 389 ~~~~~C~~~~~~~~~~~P~i~f~f~gg~-----~~~l~~~~y~~~~~~----~~~C~~-~i~~~~~~~~~~~~~~~IlG~ 458 (483)
.+.++|+..+......+|+|+|+|.|+. +|+|++++|+.+..+ ...|++ .+... ...||||+
T Consensus 273 ~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~--------~~~~ILG~ 344 (395)
T 2qp8_A 273 GEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS--------STGTVMGA 344 (395)
T ss_dssp TCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE--------SSCEEECH
T ss_pred cccccccccccchHhhCCcEEEEEccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCC--------CCcEEECh
Confidence 2357999765444457899999995443 799999999988643 358984 44321 24699999
Q ss_pred cceeeeEEEEeCCCCEEEEEeCCCC
Q 011566 459 FQLQNFYLEFDLANDRFGFAKQKCA 483 (483)
Q Consensus 459 ~fl~~~yvvfD~~~~~igfa~~~C~ 483 (483)
.|||++|+|||++++|||||+++|+
T Consensus 345 ~fl~~~yvvfD~~~~rIGfA~~~c~ 369 (395)
T 2qp8_A 345 VIMEGFYVVFDRARKRIGFAVSACH 369 (395)
T ss_dssp HHHTTEEEEEETTTTEEEEEEETTC
T ss_pred HHhCCeeEEEECCCCEEEEEeccCC
Confidence 9999999999999999999999995
No 30
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=4.2e-54 Score=427.54 Aligned_cols=290 Identities=20% Similarity=0.264 Sum_probs=240.3
Q ss_pred CcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceecCCCcCCCCCCCC
Q 011566 100 SYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNFPNVDPSRIPAFIPKRSSSSQLIGCQNPKCSWIFGP 179 (483)
Q Consensus 100 ~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~~~~~~~~~~~f~p~~SsT~~~~~c~~~~c~~~~~~ 179 (483)
.+..|+++|+|| ||+ +.|+|||||+++||+|. +|..|. |+.++.|+|++|+ ++...|
T Consensus 13 ~~~~Y~~~i~iG--~Q~-~~v~~DTGSs~lWv~~~---~C~~~~-----c~~~~~y~~~~Ss-~~~~~~----------- 69 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTT-LNLNFDTGSADLWVFST---ELPASQ-----QSGHSVYNPSATG-KELSGY----------- 69 (323)
T ss_dssp GGSCEEEEEEET--TEE-EEEEEETTCCCEEECBT---TSCHHH-----HTTSCCBCHHHHC-EEEEEE-----------
T ss_pred CCCEEEEEEEEC--CEE-EEEEEeCCCcceEEecC---CCCchh-----ccCCCCCCcccCC-cccCCC-----------
Confidence 458999999999 899 99999999999999999 897763 2457899999988 654332
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcceeecccee-EEEEEEEEEEEeCCcCcCceeeeccccCC------CCCceEeecCCCC
Q 011566 180 NVESRCKGCSPRNKTCPLACPSYLLQYGLGF-TAGLLLSETLRFPSKTVPNFLAGCSILSD------RQPAGIAGFGRSS 252 (483)
Q Consensus 180 ~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~-~~G~~~~D~v~~~~~~~~~~~fg~~~~~~------~~~~GIlGLg~~~ 252 (483)
.|.+.|++|+ +.|.+++|+|+|++.+++++.|||++... ...+||||||++.
T Consensus 70 ---------------------~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~ 128 (323)
T 1bxo_A 70 ---------------------TWSISYGDGSSASGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSS 128 (323)
T ss_dssp ---------------------EEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGG
T ss_pred ---------------------eEEEEeCCCCeEEEEEEEEEEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCccc
Confidence 9999999998 99999999999999999999999998542 3459999999987
Q ss_pred CCcc-------------cccccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCCCCCCCccee
Q 011566 253 ESLP-------------SQLGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSSSAFGEFYY 319 (483)
Q Consensus 253 ~S~~-------------~Ql~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~w~ 319 (483)
++.+ +|+..++||+||.++ .+|.|+|||+|+++ +.|++.|+|+... ..+|.
T Consensus 129 ~s~~~~~~~~~~~~~l~~~i~~~~FS~~L~~~-------~~G~l~fGg~d~~~-~~g~l~~~p~~~~--------~~~w~ 192 (323)
T 1bxo_A 129 INTVQPQSQTTFFDTVKSSLAQPLFAVALKHQ-------QPGVYDFGFIDSSK-YTGSLTYTGVDNS--------QGFWS 192 (323)
T ss_dssp GCCCBSSCCCCHHHHHGGGBSSSEEEEECCSS-------SCEEEEESSCCGGG-BSSCCEEEECBCT--------TSSCE
T ss_pred ccccccCCCCCHHHHHHHhcCCcEEEEEEeCC-------CCceEEEeCcChhh-ccCceEEEECCCC--------CCeEE
Confidence 6542 456679999999863 47899999999999 9999999999753 46899
Q ss_pred EEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccCCccCcccccC
Q 011566 320 VGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSGLRPCFDISG 399 (483)
Q Consensus 320 v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 399 (483)
|+|++|+|++ .. .....+||||||++++||++++++|++++.++.. +...+.+.++|+
T Consensus 193 v~l~~i~v~~-~~-----------~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~------~~~~g~~~~~C~---- 250 (323)
T 1bxo_A 193 FNVDSYTAGS-QS-----------GDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQ------DSNAGGYVFDCS---- 250 (323)
T ss_dssp EEEEEEEETT-EE-----------EEEEEEEECTTCSSEEECHHHHHHHHTTSTTCEE------ETTTTEEEECTT----
T ss_pred EEEeeEEECC-cc-----------CCCceEEEeCCCCceeCCHHHHHHHHHhCCCceE------cCcCCEEEEECC----
Confidence 9999999999 21 1126799999999999999999999888743211 112244567898
Q ss_pred CCccccCeEEEEEcCCcEEEcCCCCceEEeCC-ceEEEEEEecCCCCCCCCCCCceeeCccceeeeEEEEeCCCCEEEEE
Q 011566 400 KKSVYLPELILKFKGGAKMALPPENYFALVGN-EVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYLEFDLANDRFGFA 478 (483)
Q Consensus 400 ~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~-~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~~igfa 478 (483)
..+|+|+|+| +|++|+||+++|+....+ ...|++.++..+ ..+.||||++|||++|+|||++++|||||
T Consensus 251 ---~~~P~i~f~f-gg~~~~l~~~~~~~~~~~~~~~C~~~i~~~~------~~~~~ILG~~fl~~~y~vfD~~~~riGfA 320 (323)
T 1bxo_A 251 ---TNLPDFSVSI-SGYTATVPGSLINYGPSGDGSTCLGGIQSNS------GIGFSIFGDIFLKSQYVVFDSDGPQLGFA 320 (323)
T ss_dssp ---CCCCCEEEEE-TTEEEEECHHHHEEEECSSSSCEEESEEECT------TCSSEEECHHHHTTEEEEEETTTTEEEEE
T ss_pred ---CCCceEEEEE-CCEEEEECHHHeEEeccCCCCeEEEEEECCC------CCCcEEEChHHHcCEEEEEECCCCEEEEe
Confidence 3579999999 899999999999987643 368999876432 23579999999999999999999999999
Q ss_pred eCC
Q 011566 479 KQK 481 (483)
Q Consensus 479 ~~~ 481 (483)
++.
T Consensus 321 ~~a 323 (323)
T 1bxo_A 321 PQA 323 (323)
T ss_dssp EBC
T ss_pred cCC
Confidence 874
No 31
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=4e-53 Score=423.69 Aligned_cols=302 Identities=20% Similarity=0.296 Sum_probs=241.4
Q ss_pred cccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceecCCCcC
Q 011566 93 KTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNFPNVDPSRIPAFIPKRSSSSQLIGCQNPK 172 (483)
Q Consensus 93 ~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~~~~~~~~~~~f~p~~SsT~~~~~c~~~~ 172 (483)
.+||.++ +..|+++|+||||||+ +.|+|||||+++||+|. +.|+|++|+++. .
T Consensus 4 ~~~l~n~-~~~Y~~~i~iGTP~q~-~~v~~DTGSs~lWv~~~------------------~~y~~s~Ss~~~--~----- 56 (340)
T 1wkr_A 4 SVPATNQ-LVDYVVNVGVGSPATT-YSLLVDTGSSNTWLGAD------------------KSYVKTSTSSAT--S----- 56 (340)
T ss_dssp EEEEEEC-SSCEEEEEEETTTTEE-EEEEEETTCCCCEECSS------------------SCCCCCTTCEEE--E-----
T ss_pred cEeeecc-CcEEEEEEEECCCCcE-EEEEEeCCChhheecCC------------------CccCCcCCcccc--C-----
Confidence 4567776 4799999999999999 99999999999999765 479998877542 2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCCcCcCceeeeccccCC--CCCceEeecCC
Q 011566 173 CSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPSKTVPNFLAGCSILSD--RQPAGIAGFGR 250 (483)
Q Consensus 173 c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~~~~~~~~fg~~~~~~--~~~~GIlGLg~ 250 (483)
| .|.+.|++|++.|.+++|+|+|++.+++++.|||++... ...+||||||+
T Consensus 57 ----------------------~-----~~~i~Yg~Gs~~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~~~~~~GilGLg~ 109 (340)
T 1wkr_A 57 ----------------------D-----KVSVTYGSGSFSGTEYTDTVTLGSLTIPKQSIGVASRDSGFDGVDGILGVGP 109 (340)
T ss_dssp ----------------------E-----EEEEECSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEESCTTCSEEEECSC
T ss_pred ----------------------c-----eEEEEECCcEEEEEEEEEEEEECCEEEcceEEEEEEccCCCcCCCcEEECCc
Confidence 2 899999999999999999999999999999999998642 24599999999
Q ss_pred CCCCcc--------------cc------cccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCC
Q 011566 251 SSESLP--------------SQ------LGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGS 310 (483)
Q Consensus 251 ~~~S~~--------------~Q------l~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~ 310 (483)
..+++. .+ +..++||+||.+.. ......|.|+|||+|+++ +.|++.|+|+...+.
T Consensus 110 ~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~--~~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~~~~-- 184 (340)
T 1wkr_A 110 VDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTT--SESSTNGELTFGATDSSK-YTGSITYTPITSTSP-- 184 (340)
T ss_dssp GGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCS--SSSEEEEEEEESSCCGGG-CSSCCEEEECCSSTT--
T ss_pred cccccccccccccccCCCHHHHHHHcCCCCCCEEEEEecCCC--CCCCCCcEEEEcccChhh-cccceEEEECccCCC--
Confidence 876542 22 33489999998642 123357899999999998 999999999987532
Q ss_pred CCCCCcceeEEeeEEEECc-EEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccC
Q 011566 311 SSAFGEFYYVGLRQIIVGS-KHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKS 389 (483)
Q Consensus 311 ~~~~~~~w~v~l~~i~vg~-~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 389 (483)
...||.|. ++|+|++ +.+.. ...+||||||++++||++++++|.+++.+... ...+.
T Consensus 185 ---~~~~w~v~-~~i~v~~~~~l~~-----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~-------~~~g~ 242 (340)
T 1wkr_A 185 ---ASAYWGIN-QSIRYGSSTSILS-----------STAGIVDTGTTLTLIASDAFAKYKKATGAVAD-------NNTGL 242 (340)
T ss_dssp ---GGGSSEEE-EEEEETTTEEEEE-----------EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC-------TTTSS
T ss_pred ---CcceEEEE-eeEEECCCeEccC-----------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc-------CCCCe
Confidence 15789999 9999998 77642 14699999999999999999999887754321 12345
Q ss_pred CccCcccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeC-------CceEEEEEEecCCCCCCCCCCCceeeCcccee
Q 011566 390 GLRPCFDISGKKSVYLPELILKFKGGAKMALPPENYFALVG-------NEVLCLILFTDNAAGPALGRGPAIILGDFQLQ 462 (483)
Q Consensus 390 ~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~-------~~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~ 462 (483)
+.++|... ..+|+|+|+| +|++|+|++++|+++.. +...|+..+...+. ....+..||||++|||
T Consensus 243 ~~~~C~~~-----~~~p~i~f~f-~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~--~~~~~~~~iLG~~fl~ 314 (340)
T 1wkr_A 243 LRLTTAQY-----ANLQSLFFTI-GGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGS--DSGEGLDFINGLTFLE 314 (340)
T ss_dssp EEECHHHH-----HTCCCEEEEE-TTEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSS--CTTSSCCEEECHHHHT
T ss_pred EEeecccc-----ccCCcEEEEE-CCEEEEEcHHHhccccccccccCCCCceEEEEEecCCC--CCCCCcceEeChHhhh
Confidence 67889865 5679999999 89999999999997643 13578776654221 1112346999999999
Q ss_pred eeEEEEeCCCCEEEEEeCCCC
Q 011566 463 NFYLEFDLANDRFGFAKQKCA 483 (483)
Q Consensus 463 ~~yvvfD~~~~~igfa~~~C~ 483 (483)
++|+|||++++|||||+++|+
T Consensus 315 ~~y~vfD~~~~~igfA~~~~~ 335 (340)
T 1wkr_A 315 RFYSVYDTTNKRLGLATTSFT 335 (340)
T ss_dssp SEEEEEETTTTEEEEEECTTT
T ss_pred heEEEEeCCCCeEEEEecCCC
Confidence 999999999999999999985
No 32
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.2e-52 Score=429.79 Aligned_cols=319 Identities=22% Similarity=0.281 Sum_probs=245.3
Q ss_pred ccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceecCCCcCCCC
Q 011566 96 LSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNFPNVDPSRIPAFIPKRSSSSQLIGCQNPKCSW 175 (483)
Q Consensus 96 l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~~~~~~~~~~~f~p~~SsT~~~~~c~~~~c~~ 175 (483)
+....+..|+++|+||||||+ ++|+|||||+++||+|. +| | +.++.|+|++|+||+...|
T Consensus 22 l~~~~~~~Y~~~i~iGTP~q~-~~v~~DTGSs~lWv~~~---~c--~-------~~~~~y~~~~SsT~~~~~~------- 81 (402)
T 3vf3_A 22 LRGKSGQGYYVEMTVGSPPQT-LNILVDTGSSNFAVGAA---PH--P-------FLHRYYQRQLSSTYRDLRK------- 81 (402)
T ss_dssp EEEETTTEEEEEEEETTTTEE-EEEEEETTCCCEEEECS---CC--T-------TCSCCCCGGGCTTCEEEEE-------
T ss_pred ccCCCCCEEEEEEEECCCCeE-EEEEEeCCCCceEEccC---CC--C-------cccCCcCcccCcccccCCC-------
Confidence 333345689999999999999 99999999999999998 77 3 2368999999999998764
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCC-cCcCc-eeeeccccC------CCCCceEee
Q 011566 176 IFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPS-KTVPN-FLAGCSILS------DRQPAGIAG 247 (483)
Q Consensus 176 ~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~-~~~~~-~~fg~~~~~------~~~~~GIlG 247 (483)
.|.+.|++|++.|.+++|+|+|++ ..+.. +.|+++... ....+||||
T Consensus 82 -------------------------~~~i~Yg~Gs~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlG 136 (402)
T 3vf3_A 82 -------------------------GVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILG 136 (402)
T ss_dssp -------------------------EEEEECSSCEEEEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEE
T ss_pred -------------------------EEEEEECcEEEEEEEEEEEEEECCccccceeeeEEEEEccccccccCCCccceEE
Confidence 899999999999999999999984 44443 346765532 123499999
Q ss_pred cCCCCCCcc------------ccccc-ceeeeecccCcCC-----CCCCccceEEccCCCCCCCCCCCceeeeceeCCCC
Q 011566 248 FGRSSESLP------------SQLGL-KKFSYCLLSRKFD-----DAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVG 309 (483)
Q Consensus 248 Lg~~~~S~~------------~Ql~~-~~Fs~~L~~~~~~-----~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~ 309 (483)
||++.++.. +|... ++||+||.+.... +....+|.|+|||+|+++ +.|+++|+|+..
T Consensus 137 Lg~~~~s~~~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~---- 211 (402)
T 3vf3_A 137 LAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSL-YTGSLWYTPIRR---- 211 (402)
T ss_dssp CSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGG-EEEEEEEEECSS----
T ss_pred cCchhhcccCCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCccc-ccCceEEEeCCc----
Confidence 999876543 22222 7999999753111 013457899999999998 999999999986
Q ss_pred CCCCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhcccCccccccccC
Q 011566 310 SSSAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKS 389 (483)
Q Consensus 310 ~~~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 389 (483)
..+|.|.+++|+|+++.+.++...+ +...+||||||++++||++++++|++++.+.... ..........
T Consensus 212 -----~~~w~v~l~~i~v~g~~~~~~~~~~-----~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~-~~~~~~~~~~ 280 (402)
T 3vf3_A 212 -----EWYYEVIIVRVEINGQDLKMDCKEY-----NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST-EKFPDGFWLG 280 (402)
T ss_dssp -----BTTBEECEEEEEETTEECCCCGGGG-----GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTT-SCCCTTGGGT
T ss_pred -----CcEEEEEEeEEEECCEEeccccccc-----CCCeEEEECCCCcccCCHHHHHHHHHHHhhhccc-cccCcccccc
Confidence 5689999999999999987654432 1367999999999999999999999999887531 1111111123
Q ss_pred CccCcccccCCCccccCeEEEEEcCCc-----EEEcCCCCceEEeCCc----eEEEE-EEecCCCCCCCCCCCceeeCcc
Q 011566 390 GLRPCFDISGKKSVYLPELILKFKGGA-----KMALPPENYFALVGNE----VLCLI-LFTDNAAGPALGRGPAIILGDF 459 (483)
Q Consensus 390 ~~~~C~~~~~~~~~~~P~i~f~f~gg~-----~~~l~~~~y~~~~~~~----~~C~~-~i~~~~~~~~~~~~~~~IlG~~ 459 (483)
+.++|+.........+|+|+|+|.++. +|+|++++|+.+..+. ..|++ .+.. ....||||++
T Consensus 281 ~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~--------~~~~~ILG~~ 352 (402)
T 3vf3_A 281 EQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ--------SSTGTVMGAV 352 (402)
T ss_dssp CSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEE--------ESSCEEECHH
T ss_pred ccccccccccchHhhCCceEEEEecCCCCceEEEEECHHHheehhccCCCCCceEEEEeccC--------CCCcEEEChH
Confidence 468999875444457899999994432 5999999999986542 48996 3321 1246999999
Q ss_pred ceeeeEEEEeCCCCEEEEEeCCCC
Q 011566 460 QLQNFYLEFDLANDRFGFAKQKCA 483 (483)
Q Consensus 460 fl~~~yvvfD~~~~~igfa~~~C~ 483 (483)
|||++|+|||++++|||||+++|+
T Consensus 353 fl~~~yvvfD~~~~rIGfA~~~c~ 376 (402)
T 3vf3_A 353 IMEGFYVVFDRARKRIGFAVSACH 376 (402)
T ss_dssp HHTTEEEEEEGGGTEEEEEEETTC
T ss_pred HhCCeEEEEECCCCEEEEEecccC
Confidence 999999999999999999999995
No 33
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=5.7e-52 Score=421.38 Aligned_cols=334 Identities=24% Similarity=0.474 Sum_probs=244.7
Q ss_pred ccccc-ccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceecCCCc
Q 011566 93 KTPLS-VHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCVDCNFPNVDPSRIPAFIPKRSSSSQLIGCQNP 171 (483)
Q Consensus 93 ~~~l~-~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~~C~~~~~~~~~~~~f~p~~SsT~~~~~c~~~ 171 (483)
..|+. ++.++.|+++|.|||| |+|||||+++||+|. +| .+|+.++|.++
T Consensus 4 ~~pv~~~~~~~~Y~~~i~iGtP------v~~DTGSs~lWv~c~---~~---------------------~~~~~~~C~s~ 53 (381)
T 1t6e_X 4 LAPVTKDPATSLYTIPFHDGAS------LVLDVAGPLVWSTCD---GG---------------------QPPAEIPCSSP 53 (381)
T ss_dssp EEEEEECTTTCCEEEEEETTEE------EEEETTCCCEEECCC---TT---------------------CCCCCCBTTSH
T ss_pred EEeEEecCCCcEEEEEEeCCCE------EEEECCCCceEEeCC---CC---------------------CCCCccCCCCc
Confidence 44555 5667899999999996 899999999999887 44 12456667777
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC--CC-CCCCCcceeecccee-EEEEEEEEEEEeCC----cCcCce----eeeccccC-
Q 011566 172 KCSWIFGPNVESRCKGCSPRNK--TC-PLACPSYLLQYGLGF-TAGLLLSETLRFPS----KTVPNF----LAGCSILS- 238 (483)
Q Consensus 172 ~c~~~~~~~~~~~c~~c~~~~~--~c-~~~c~~~~~~Yg~g~-~~G~~~~D~v~~~~----~~~~~~----~fg~~~~~- 238 (483)
.|...... ....|+.... .| ...|..|.+.||+|+ +.|.+++|+|+|++ ..++++ .|||+...
T Consensus 54 ~C~~~~~~----~~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~ 129 (381)
T 1t6e_X 54 TCLLANAY----PAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKL 129 (381)
T ss_dssp HHHHHHSS----CCTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGG
T ss_pred hhccccCC----CCCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccc
Confidence 77543211 1112221100 00 124424999999998 69999999999984 456665 56998754
Q ss_pred -C---CCCceEeecCCCCCCcccccc-----cceeeeecccCcCCCCCCccceEEccCCCCC--CCCCCCceeeeceeCC
Q 011566 239 -D---RQPAGIAGFGRSSESLPSQLG-----LKKFSYCLLSRKFDDAPVSSNLVLDTGPGSG--DSKTPGLSYTPFYKNP 307 (483)
Q Consensus 239 -~---~~~~GIlGLg~~~~S~~~Ql~-----~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~--~~~~g~l~~~p~~~~~ 307 (483)
. ...+||||||++.+|++.||. .++||+||.+. .+|.|+|||+|.. + +.++++|+|+..++
T Consensus 130 ~~~~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~-------~~G~l~fGg~~~~~~~-~~g~l~~tPl~~~~ 201 (381)
T 1t6e_X 130 LASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTG-------GPGVAIFGGGPVPWPQ-FTQSMPYTPLVTKG 201 (381)
T ss_dssp GTTSCTTEEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSS-------SCEEEEESCCSCSCHH-HHTTCCEEECBCCT
T ss_pred cCCCCCCCceEEEeCCCcchhHHHHhhhcccCceEEEEeCCC-------CCeeEEeCCccccccc-ccCcceeeccccCC
Confidence 1 344999999999999998875 38999999863 4789999998753 3 68999999998754
Q ss_pred CCCCCCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHHHHhc-------ccC
Q 011566 308 VGSSSAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMG-------NYS 380 (483)
Q Consensus 308 ~~~~~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~-------~~~ 380 (483)
. ..+|.|+|++|+||++.+.++...+. .+++||||||++++||+++|++|+++|.+.+. .+.
T Consensus 202 ~------~~~y~v~l~~i~vg~~~~~~~~~~~~-----~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~ 270 (381)
T 1t6e_X 202 G------SPAHYISARSIVVGDTRVPVPEGALA-----TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVA 270 (381)
T ss_dssp T------CCSCEECEEEEEETTEECCCCTTCSC-----TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------C
T ss_pred C------CcceEEEEEEEEEcCEEecCCHHHcc-----CCCEEEECCCccEEeCHHHHHHHHHHHHHhhccccccccccc
Confidence 2 23566999999999999887655442 36799999999999999999999999988764 222
Q ss_pred ccccccccCCccCcccccCCC----ccccCeEEEEEcCCcEEEcCCCCceEEeCCceEEEEEEecCCCCCCCCCCCceee
Q 011566 381 RAADVEKKSGLRPCFDISGKK----SVYLPELILKFKGGAKMALPPENYFALVGNEVLCLILFTDNAAGPALGRGPAIIL 456 (483)
Q Consensus 381 ~~~~~~~~~~~~~C~~~~~~~----~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~C~~~i~~~~~~~~~~~~~~~Il 456 (483)
+.. ....++++|+..++.. ...+|+|+|+|.||++|+||+++|+++..++..|+++.............+.|||
T Consensus 271 ~~~--~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~IL 348 (381)
T 1t6e_X 271 RAV--EAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVIL 348 (381)
T ss_dssp CEE--CCCTTCSCEEEGGGCCEETTEECCCCEEEEETTSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEE
T ss_pred ccC--CCCCCCCccCCCCCCcccccCCcCCeEEEEECCCcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEE
Confidence 211 1123458999775321 1378999999965799999999999886556789975543210000012357999
Q ss_pred CccceeeeEEEEeCCCCEEEEEeCC
Q 011566 457 GDFQLQNFYLEFDLANDRFGFAKQK 481 (483)
Q Consensus 457 G~~fl~~~yvvfD~~~~~igfa~~~ 481 (483)
|+.|||++|+|||++++|||||++.
T Consensus 349 Gd~fl~~~yvvfD~~~~riGfA~~~ 373 (381)
T 1t6e_X 349 GGAQMEDFVLDFDMEKKRLGFSRLP 373 (381)
T ss_dssp CHHHHTTEEEEEETTTTEEEEEECC
T ss_pred ChHHhCCcEEEEECCCCEEEEeccc
Confidence 9999999999999999999999864
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.9e-42 Score=328.69 Aligned_cols=217 Identities=20% Similarity=0.308 Sum_probs=186.0
Q ss_pred cccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCcceecCC
Q 011566 93 KTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCV---DCNFPNVDPSRIPAFIPKRSSSSQLIGCQ 169 (483)
Q Consensus 93 ~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~---~C~~~~~~~~~~~~f~p~~SsT~~~~~c~ 169 (483)
.++|.++.+..|+++|.||||||+ +.|+|||||+++||+|. +|. .|.. ++.|+|++|+||+...|
T Consensus 4 ~~~l~n~~~~~Y~~~i~iGtP~q~-~~v~~DTGSs~lWv~~~---~C~~~~~C~~-------~~~y~~~~SsT~~~~~~- 71 (239)
T 1b5f_A 4 VVALTNDRDTSYFGEIGIGTPPQK-FTVIFDTGSSVLWVPSS---KCINSKACRA-------HSMYESSDSSTYKENGT- 71 (239)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEE-EEEEEETTCCCEEEEBT---TCCSCHHHHT-------SCCBCGGGCTTCEEEEE-
T ss_pred eeeeeecCCCEEEEEEEECCCCeE-EEEEEeCCCcceEEEcC---CCCCCcccCC-------CCCCCCccCCCeeeCCc-
Confidence 467888888999999999999999 99999999999999999 886 4643 68999999999998763
Q ss_pred CcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCCcCcCceeeeccccCC------CCCc
Q 011566 170 NPKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPSKTVPNFLAGCSILSD------RQPA 243 (483)
Q Consensus 170 ~~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~~~~~~~~fg~~~~~~------~~~~ 243 (483)
.|.+.|++|++.|.+++|+|+|++..++++.|||+.... ...+
T Consensus 72 -------------------------------~~~i~Yg~Gs~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~ 120 (239)
T 1b5f_A 72 -------------------------------FGAIIYGTGSITGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFD 120 (239)
T ss_dssp -------------------------------EEEEECSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCC
T ss_pred -------------------------------EEEEEECCCcEEEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcc
Confidence 899999999999999999999999999999999987432 2349
Q ss_pred eEeecCCCCCC------cccc--cccceeeeecccCcCCCCCCccceEEccCCCCCCCCCCCceeeeceeCCCCCCCCCC
Q 011566 244 GIAGFGRSSES------LPSQ--LGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSSSAFG 315 (483)
Q Consensus 244 GIlGLg~~~~S------~~~Q--l~~~~Fs~~L~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~ 315 (483)
||||||+..++ +.+| +..++||+||.+.. .....|.|+|||+|+++ +.|++.|+|+.. .
T Consensus 121 GilGLg~~~~s~p~~~~l~~qg~i~~~~FS~~l~~~~---~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~---------~ 187 (239)
T 1b5f_A 121 GILGLSFQTISVPVWYNMLNQGLVKERRFSFWLNRNV---DEEEGGELVFGGLDPNH-FRGDHTYVPVTY---------Q 187 (239)
T ss_dssp EEEECSCCSSSCCHHHHHHHTTCCSSSEEEEEECCSC---SSSCCEEEEETSCCGGG-EEEEEEEEEEEE---------E
T ss_pred eEEecCccccccHHHHHHHHCCCCCCCEEEEEEeCCC---CCCCCeEEEECCcChhh-ccCceEEEEccc---------C
Confidence 99999999887 3344 44589999998741 12357899999999988 999999999986 4
Q ss_pred cceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHHHHHHHHHH
Q 011566 316 EFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFI 373 (483)
Q Consensus 316 ~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~ 373 (483)
.+|.|.|++|+|+++.+.+.. ....+||||||++++||++++++|+++++
T Consensus 188 ~~~~v~l~~i~v~~~~~~~~~--------~~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 188 YYWQFGIGDVLIGDKSTGFCA--------PGCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp TTEEEEECCEEETTEECCTTT--------TCEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred CeEEEEeeEEEECCEEecccC--------CCCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 699999999999998875431 23679999999999999999999998874
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=2.3e-37 Score=294.35 Aligned_cols=221 Identities=25% Similarity=0.340 Sum_probs=175.8
Q ss_pred CCcCcCceeeeccccCCC------CCceEeecCCCCCCcc----------cc--cccceeeeecccCcCCCCCCccceEE
Q 011566 223 PSKTVPNFLAGCSILSDR------QPAGIAGFGRSSESLP----------SQ--LGLKKFSYCLLSRKFDDAPVSSNLVL 284 (483)
Q Consensus 223 ~~~~~~~~~fg~~~~~~~------~~~GIlGLg~~~~S~~----------~Q--l~~~~Fs~~L~~~~~~~~~~~~g~l~ 284 (483)
|+.++++|.|||++.... ..+||||||++.++.. +| +..++||+||.+.. ....+|.|+
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~---~~~~~G~l~ 77 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDP---DAQPGGELM 77 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSST---TCSSCEEEE
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCC---CCCCCcEEE
Confidence 456788999999985432 3499999999876642 23 44589999998752 122479999
Q ss_pred ccCCCCCCCCCCCceeeeceeCCCCCCCCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHH
Q 011566 285 DTGPGSGDSKTPGLSYTPFYKNPVGSSSAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPL 364 (483)
Q Consensus 285 ~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~ 364 (483)
|||+|+++ +.|+++|+|+.. ..+|.|++++|+|+++.+.. .....+||||||+++++|+++
T Consensus 78 fGg~d~~~-~~g~l~~~p~~~---------~~~~~v~l~~i~v~~~~~~~---------~~~~~aiiDSGTt~~~lP~~~ 138 (241)
T 1lya_B 78 LGGTDSKY-YKGSLSYLNVTR---------KAYWQVHLDQVEVASGLTLC---------KEGCEAIVDTGTSLMVGPVDE 138 (241)
T ss_dssp ETSCCGGG-EEEEEEEEECSS---------BTTBEEEEEEEEETTSCEES---------TTCEEEEECTTCSSEEECHHH
T ss_pred ECCcCHHH-cCCceEEEECcc---------ccEEEEEEeEEEECCeeEec---------cCCCEEEEECCCccccCCHHH
Confidence 99999988 999999999975 57899999999999876421 223679999999999999999
Q ss_pred HHHHHHHHHHHhcccCccccccccCCccCcccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeCC--ceEEEEEEecC
Q 011566 365 FEAVAKEFIRQMGNYSRAADVEKKSGLRPCFDISGKKSVYLPELILKFKGGAKMALPPENYFALVGN--EVLCLILFTDN 442 (483)
Q Consensus 365 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~C~~~i~~~ 442 (483)
+++|++++.+.. ...+.+.++|+.. ..+|+|+|+| +|++|+||+++|+++..+ ...|++.+...
T Consensus 139 ~~~l~~~~~~~~--------~~~g~~~~~C~~~-----~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~ 204 (241)
T 1lya_B 139 VRELQKAIGAVP--------LIQGEYMIPCEKV-----STLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGM 204 (241)
T ss_dssp HHHHHHHHTCEE--------EETTEEEEEGGGG-----GGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEEC
T ss_pred HHHHHHHhCCee--------ccCCcEEEECCCC-----ccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEec
Confidence 999998885421 1234567889875 6789999999 899999999999998753 46899877644
Q ss_pred CCCCCCCCCCceeeCccceeeeEEEEeCCCCEEEEEeCC
Q 011566 443 AAGPALGRGPAIILGDFQLQNFYLEFDLANDRFGFAKQK 481 (483)
Q Consensus 443 ~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~~igfa~~~ 481 (483)
+. .....+.||||++|||++|+|||++++|||||+++
T Consensus 205 ~~--~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 205 DI--PPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp CC--CTTTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cc--CCCCCCeEEechHHhcceEEEEECCCCEEEEEEcC
Confidence 31 11234579999999999999999999999999875
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.88 E-value=4.2e-23 Score=166.25 Aligned_cols=89 Identities=31% Similarity=0.539 Sum_probs=80.7
Q ss_pred cccccccCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCcceecC
Q 011566 93 KTPLSVHSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCTSRYRCV----DCNFPNVDPSRIPAFIPKRSSSSQLIGC 168 (483)
Q Consensus 93 ~~~l~~~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~~~~~C~----~C~~~~~~~~~~~~f~p~~SsT~~~~~c 168 (483)
..||.++.+..|+++|.||||||+ |.|+|||||+++||+|. +|. .|.. ++.|+|++|+||+...|
T Consensus 4 ~~~l~n~~~~~Y~~~i~iGTP~Q~-~~v~~DTGSs~lWv~~~---~C~~~~~~C~~-------~~~y~p~~SsT~~~~~~ 72 (97)
T 1lya_A 4 PEVLKNYMDAQYYGEIGIGTPPQC-FTVVFDTGSSNLWVPSI---HCKLLDIACWI-------HHKYNSDKSSTYVKNGT 72 (97)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEE-EEEEEETTCCCEEEEBT---TCCTTCHHHHT-------SCCBCGGGCTTCEEEEE
T ss_pred eEeeEECCCCeEEEEEEECCCCeE-EEEEEeCCCCceEEeEc---CccCcccccCC-------CCCCCchhCCCceeCCC
Confidence 467887788999999999999999 99999999999999999 886 4643 68999999999998763
Q ss_pred CCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeccceeEEEEEEEEEEEeCC
Q 011566 169 QNPKCSWIFGPNVESRCKGCSPRNKTCPLACPSYLLQYGLGFTAGLLLSETLRFPS 224 (483)
Q Consensus 169 ~~~~c~~~~~~~~~~~c~~c~~~~~~c~~~c~~~~~~Yg~g~~~G~~~~D~v~~~~ 224 (483)
.|.+.||+|++.|.+++|+|+|++
T Consensus 73 --------------------------------~~~i~Yg~Gs~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 73 --------------------------------SFDIHYGSGSLSGYLSQDTVSVPC 96 (97)
T ss_dssp --------------------------------EEEEECSSCEEEEEEEEEEEEESC
T ss_pred --------------------------------cEEEEECCcEEEEEEEEEEEEECC
Confidence 899999999999999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.70 E-value=1.6e-17 Score=131.19 Aligned_cols=84 Identities=32% Similarity=0.516 Sum_probs=70.0
Q ss_pred CCccCcccccCCCccccCeEEEEEcCCcEEEcCCCCceEEeCC--ceEEEEEEecCCCCCCCCCCCceeeCccceeeeEE
Q 011566 389 SGLRPCFDISGKKSVYLPELILKFKGGAKMALPPENYFALVGN--EVLCLILFTDNAAGPALGRGPAIILGDFQLQNFYL 466 (483)
Q Consensus 389 ~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~C~~~i~~~~~~~~~~~~~~~IlG~~fl~~~yv 466 (483)
.|.++|... ..+|+|+|+| +|++++|++++|+..... ...|++.++..+. ...++.||||+.|||++|+
T Consensus 2 ~y~v~C~~~-----~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~---~~~~~~~ILGd~Fl~~~y~ 72 (87)
T 1b5f_B 2 ELQVDCNTL-----SSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDA---TLLGPLWILGDVFMRPYHT 72 (87)
T ss_dssp CCEECGGGG-----GGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCC---BSSSBEEEECHHHHTTEEE
T ss_pred cEEEECCCC-----CcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCC---CCCCCeEEechHHhccEEE
Confidence 467899875 6789999999 899999999999988643 3689998875432 1234579999999999999
Q ss_pred EEeCCCCEEEEEeCC
Q 011566 467 EFDLANDRFGFAKQK 481 (483)
Q Consensus 467 vfD~~~~~igfa~~~ 481 (483)
|||++++|||||+++
T Consensus 73 vfD~~~~riGfA~~~ 87 (87)
T 1b5f_B 73 VFDYGNLLVGFAEAA 87 (87)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEECCCCEEEEEEcC
Confidence 999999999999874
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.09 E-value=0.025 Score=48.14 Aligned_cols=33 Identities=12% Similarity=0.120 Sum_probs=27.4
Q ss_pred cCcccEEEEEEeCCCCCceeeEEEEcCCCceeeeCC
Q 011566 99 HSYGGYSISLSFGTPPQASTPFIFDTGSSLVWFPCT 134 (483)
Q Consensus 99 ~~~~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~ 134 (483)
...+.+++++.|+. ++ +.+++|||++.+-+...
T Consensus 22 ~~~~~~~v~v~InG--~~-~~~LvDTGAs~s~is~~ 54 (148)
T 2i1a_A 22 TQVPMLYINIEINN--YP-VKAFVDTGAQTTIMSTR 54 (148)
T ss_dssp -CCCCCEEEEEETT--EE-EEEEECTTCSSCEEEHH
T ss_pred cccceEEEEEEECC--EE-EEEEEECCCCccccCHH
Confidence 34578999999998 78 99999999999888643
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.83 E-value=0.21 Score=42.26 Aligned_cols=26 Identities=19% Similarity=0.269 Sum_probs=23.9
Q ss_pred ceeeCccceeeeEEEEeCCCCEEEEE
Q 011566 453 AIILGDFQLQNFYLEFDLANDRFGFA 478 (483)
Q Consensus 453 ~~IlG~~fl~~~yvvfD~~~~~igfa 478 (483)
..|||..||+++-+..|+.+++|-|.
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEc
Confidence 47999999999999999999999874
No 40
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=92.81 E-value=0.19 Score=42.66 Aligned_cols=27 Identities=19% Similarity=0.241 Sum_probs=24.7
Q ss_pred ceeeCccceeeeEEEEeCCCCEEEEEe
Q 011566 453 AIILGDFQLQNFYLEFDLANDRFGFAK 479 (483)
Q Consensus 453 ~~IlG~~fl~~~yvvfD~~~~~igfa~ 479 (483)
..|||..||+.+-.+.|+.+++|-|..
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~~ 134 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIGT 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECTT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEcc
Confidence 479999999999999999999998864
No 41
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=88.71 E-value=0.57 Score=39.68 Aligned_cols=30 Identities=10% Similarity=0.114 Sum_probs=26.8
Q ss_pred ccEEEEEEeCCCCCceeeEEEEcCCCceeeeCC
Q 011566 102 GGYSISLSFGTPPQASTPFIFDTGSSLVWFPCT 134 (483)
Q Consensus 102 ~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~ 134 (483)
..|++++.|.. ++ +++++|||++.+.+...
T Consensus 23 ~~l~v~~~Ing--~~-v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 23 TMLYINCKVNG--HP-LKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCEEEEEETT--EE-EEEEECTTCSSCEEEHH
T ss_pred CEEEEEEEECC--EE-EEEEEeCCCCcEeeCHH
Confidence 57999999988 88 99999999999988654
No 42
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=78.77 E-value=1.4 Score=34.69 Aligned_cols=27 Identities=11% Similarity=0.146 Sum_probs=24.0
Q ss_pred cEEEEEEeCCCCCceeeEEEEcCCCceeee
Q 011566 103 GYSISLSFGTPPQASTPFIFDTGSSLVWFP 132 (483)
Q Consensus 103 ~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~ 132 (483)
.-++.|.||. |. +.+++|||.+++-+.
T Consensus 8 RP~v~v~I~G--q~-~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 8 RPTTIVLIND--TP-LNVLLDTGADTSVLT 34 (104)
T ss_dssp CCEEEEEETT--EE-EEEEECTTCSSCEEE
T ss_pred CCEEEEEECC--EE-EEEEeccCCCcEEEc
Confidence 3567899998 88 999999999999997
No 43
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=77.70 E-value=1.6 Score=34.01 Aligned_cols=28 Identities=18% Similarity=0.227 Sum_probs=24.4
Q ss_pred EEEEEEeCCCCCceeeEEEEcCCCceeeeCC
Q 011566 104 YSISLSFGTPPQASTPFIFDTGSSLVWFPCT 134 (483)
Q Consensus 104 Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~ 134 (483)
=++.|.||. |. +.+++|||.+++-+...
T Consensus 9 P~vtvkI~G--q~-~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 9 PLVTIKIGG--QL-KEALLDTGADDTIIEEM 36 (99)
T ss_dssp CEEEEEETT--EE-EEEEECTTCSSEEESCC
T ss_pred CEEEEEECC--EE-EEEEeccCCCcEEEecc
Confidence 457799998 89 99999999999999754
No 44
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=70.72 E-value=3 Score=32.45 Aligned_cols=28 Identities=14% Similarity=0.125 Sum_probs=24.3
Q ss_pred EEEEEEeCCCCCceeeEEEEcCCCceeeeCC
Q 011566 104 YSISLSFGTPPQASTPFIFDTGSSLVWFPCT 134 (483)
Q Consensus 104 Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~ 134 (483)
=++.|.||. |. +.+++|||.+++-+...
T Consensus 9 P~vti~I~G--q~-~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 9 PVVTAYIEG--QP-VEVLLDTGADDSIVAGI 36 (99)
T ss_dssp CEEEEEETT--EE-EEEEECTTCSSCEESSC
T ss_pred CeEEEEECC--EE-EEEEEecCCCceEEcCc
Confidence 467799999 89 99999999999999644
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=65.59 E-value=4.1 Score=32.73 Aligned_cols=27 Identities=15% Similarity=0.263 Sum_probs=23.1
Q ss_pred EEEEEEeCCCCCceeeEEEEcCCCceeeeCC
Q 011566 104 YSISLSFGTPPQASTPFIFDTGSSLVWFPCT 134 (483)
Q Consensus 104 Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~ 134 (483)
=++ |.||. |. +.+++|||.+++-+...
T Consensus 15 P~v-ikI~G--q~-~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 15 EIL-IFVNG--YP-IKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEE-EEETT--EE-EEEEECTTCSSCEEEGG
T ss_pred CEE-EEECC--EE-EEEEecCCCCcEEEccc
Confidence 444 99998 89 99999999999999754
No 46
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=65.50 E-value=6.6 Score=30.28 Aligned_cols=16 Identities=25% Similarity=0.420 Sum_probs=14.1
Q ss_pred CeEEcccccceecCHH
Q 011566 348 GVIVDSGSTFTFMEGP 363 (483)
Q Consensus 348 ~~iiDSGTt~~~lp~~ 363 (483)
.++||||++.+++|..
T Consensus 29 ~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 29 TVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCCceEEeEc
Confidence 4899999999999865
No 47
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=62.81 E-value=4.8 Score=32.00 Aligned_cols=30 Identities=20% Similarity=0.383 Sum_probs=24.7
Q ss_pred EEEEEEeC---CCCCceeeEEEEcCCCceeeeCC
Q 011566 104 YSISLSFG---TPPQASTPFIFDTGSSLVWFPCT 134 (483)
Q Consensus 104 Y~~~i~iG---tP~q~~~~v~iDTGSs~~Wv~~~ 134 (483)
=.+.|.|| +|+|. +..++|||-+++-+...
T Consensus 11 PlvtikI~~~~~~Gq~-~eaLLDTGADdTVl~~~ 43 (116)
T 3liy_A 11 PVIKAQVDTQTSHPKT-IEALLDTGADMTVIPIA 43 (116)
T ss_dssp CEEEEEEECSSSCCEE-EEEEECTTBSSCEEEGG
T ss_pred CeEEEEEccccCCCeE-eEEEeccCCCccEEecc
Confidence 45566666 67899 99999999999999765
No 48
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=57.58 E-value=7.7 Score=30.93 Aligned_cols=28 Identities=14% Similarity=0.183 Sum_probs=24.5
Q ss_pred EEEEEEeCCCCCceeeEEEEcCCCceeeeCC
Q 011566 104 YSISLSFGTPPQASTPFIFDTGSSLVWFPCT 134 (483)
Q Consensus 104 Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~ 134 (483)
=.+.|.||. |. +..++|||-+++-+...
T Consensus 10 P~vti~I~G--q~-~eaLLDTGADdTVi~~~ 37 (114)
T 3sqf_A 10 PSLTLWLDD--KM-FTGLINTGADVTIIKLE 37 (114)
T ss_dssp CEEEEEETT--EE-EEEEECTTCSSCEEEGG
T ss_pred CeEEEEECC--EE-EEEEEccCCCceEEecc
Confidence 467799998 99 99999999999999755
No 49
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=44.66 E-value=15 Score=30.10 Aligned_cols=30 Identities=27% Similarity=0.360 Sum_probs=25.5
Q ss_pred ccEEEEEEeCCCCCceeeEEEEcCCCceeeeCC
Q 011566 102 GGYSISLSFGTPPQASTPFIFDTGSSLVWFPCT 134 (483)
Q Consensus 102 ~~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~ 134 (483)
..-++.+.|+. |. +.+++|||.+++-+...
T Consensus 21 ~RP~v~i~I~G--~~-~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 21 PEPRITLKVGG--QP-VTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp CSSEEEEEETT--EE-EEEEECTTCSSCEECSC
T ss_pred CCCEEEEEECC--EE-EEEEEeCCCCeEEEccc
Confidence 35677899998 88 99999999999999654
No 50
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=44.37 E-value=23 Score=34.16 Aligned_cols=44 Identities=18% Similarity=0.289 Sum_probs=30.1
Q ss_pred CCCceeeeceeCCCCCCCCCCcceeEEeeEEEEC--cEEeeeCCccccCCCCCCCCeEEcccccceecCHH
Q 011566 295 TPGLSYTPFYKNPVGSSSAFGEFYYVGLRQIIVG--SKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGP 363 (483)
Q Consensus 295 ~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~vg--~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~ 363 (483)
.|.+..+|+.... ...|.++ |.|| .+.+ .++||||++.+|+|..
T Consensus 4 ~g~~~~~~l~~~~-------~~~Y~~~---i~iGtP~q~~---------------~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFD-------LEEYAIP---VSIGTPGQDF---------------YLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETT-------TTEEEEE---EEETTTTEEE---------------EEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCC-------CCEEEEE---EEECCCCcEE---------------EEEEcCCCCCeEECCC
Confidence 3556667776532 4567654 7787 4443 4899999999999865
No 51
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=43.70 E-value=20 Score=34.00 Aligned_cols=32 Identities=19% Similarity=0.291 Sum_probs=23.7
Q ss_pred CcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHH
Q 011566 315 GEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPL 364 (483)
Q Consensus 315 ~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~ 364 (483)
...|.++ |+||.+.+ .++||||++.+++|..-
T Consensus 14 ~~~Y~~~---i~iG~Q~~---------------~v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 14 DEEYITP---VTIGGTTL---------------NLNFDTGSADLWVFSTE 45 (323)
T ss_dssp GSCEEEE---EEETTEEE---------------EEEEETTCCCEEECBTT
T ss_pred CCEEEEE---EEECCEEE---------------EEEEeCCCcceEEecCC
Confidence 4567654 67885554 38999999999999753
No 52
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=42.85 E-value=25 Score=33.31 Aligned_cols=42 Identities=19% Similarity=0.350 Sum_probs=28.0
Q ss_pred CceeeeceeCCCCCCCCCCcceeEEeeEEEECc--EEeeeCCccccCCCCCCCCeEEcccccceecCHH
Q 011566 297 GLSYTPFYKNPVGSSSAFGEFYYVGLRQIIVGS--KHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGP 363 (483)
Q Consensus 297 ~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~vg~--~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~ 363 (483)
++...|+.... ...|.++ |.||. +.+ .++||||++.+|+|..
T Consensus 2 ~~~~~~l~n~~-------~~~Y~~~---i~iGtP~q~~---------------~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 2 EVASVPLTNYL-------DSQYFGK---IYLGTPPQEF---------------TVLFDTGSSDFWVPSI 45 (323)
T ss_dssp CCEEEEEEEET-------TTEEEEE---EEETTTTEEE---------------EEEEETTCCCEEEEBT
T ss_pred CcceeeeEecc-------CCEEEEE---EEECCCCeEE---------------EEEEeCCccceEEcCC
Confidence 34556665532 3456654 67774 443 4899999999999864
No 53
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=41.46 E-value=23 Score=33.62 Aligned_cols=32 Identities=25% Similarity=0.375 Sum_probs=23.6
Q ss_pred CcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHH
Q 011566 315 GEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPL 364 (483)
Q Consensus 315 ~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~ 364 (483)
...|.++ |.||.+.+ .++||||++.+|+|..-
T Consensus 14 ~~~Y~~~---i~iG~q~~---------------~v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 14 DEEYITQ---VTVGDDTL---------------GLDFDTGSADLWVFSSQ 45 (323)
T ss_dssp GCCEEEE---EEETTEEE---------------EEEEETTCCCEEECBTT
T ss_pred CCEEEEE---EEECCEEE---------------EEEEcCCCcceEEecCC
Confidence 4456654 67775554 38999999999999753
No 54
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=39.91 E-value=18 Score=31.94 Aligned_cols=29 Identities=17% Similarity=0.187 Sum_probs=25.0
Q ss_pred cEEEEEEeCCCCCceeeEEEEcCCCceeeeCC
Q 011566 103 GYSISLSFGTPPQASTPFIFDTGSSLVWFPCT 134 (483)
Q Consensus 103 ~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~ 134 (483)
.-.+.|.||. |. +..++|||-+++-+...
T Consensus 8 RP~vtv~I~G--q~-~e~LLDTGAD~TVl~~~ 36 (203)
T 3ka2_A 8 RPLVTIRIGG--QL-KEALLDTGADDTVIEEL 36 (203)
T ss_dssp CCEEEEEETT--EE-EEEEECTTCSSCEECSC
T ss_pred CCeEEEEECC--EE-EEEEEecCCCceEEecc
Confidence 4578899999 88 99999999999999644
No 55
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=38.52 E-value=17 Score=29.34 Aligned_cols=22 Identities=9% Similarity=0.152 Sum_probs=18.2
Q ss_pred eCCCCCceeeEEEEcCCCceeeeCC
Q 011566 110 FGTPPQASTPFIFDTGSSLVWFPCT 134 (483)
Q Consensus 110 iGtP~q~~~~v~iDTGSs~~Wv~~~ 134 (483)
||. |. +..++|||-+++-+...
T Consensus 27 i~g--q~-~eaLLDTGAD~TVl~~~ 48 (124)
T 2rsp_A 27 QRS--VY-ITALLDSGADITIISEE 48 (124)
T ss_dssp CSE--EE-EEEEECTTCSSCEEETT
T ss_pred CCC--EE-EEEEecCCCCcEEEecc
Confidence 554 66 79999999999999755
No 56
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=36.80 E-value=23 Score=33.54 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=23.5
Q ss_pred CcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHH
Q 011566 315 GEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPL 364 (483)
Q Consensus 315 ~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~ 364 (483)
...|.++ |.||.+.+ .++||||++.+|+|..-
T Consensus 13 ~~~Y~~~---i~iG~Q~~---------------~v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 13 DEEYLTP---VTVGKSTL---------------HLDFDTGSADLWVFSDE 44 (325)
T ss_dssp TSCEEEE---EEEBTEEE---------------EEEEETTCCCEEEECTT
T ss_pred CCEEEEE---EEECCEEE---------------EEEEeCCCccceEeeCC
Confidence 4567655 66775554 38999999999999753
No 57
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=34.83 E-value=33 Score=30.91 Aligned_cols=16 Identities=31% Similarity=0.567 Sum_probs=14.0
Q ss_pred CeEEcccccceecCHH
Q 011566 348 GVIVDSGSTFTFMEGP 363 (483)
Q Consensus 348 ~~iiDSGTt~~~lp~~ 363 (483)
.++||||++.+|+|..
T Consensus 29 ~v~~DTGSs~lWv~~~ 44 (239)
T 1b5f_A 29 TVIFDTGSSVLWVPSS 44 (239)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCcceEEEcC
Confidence 4899999999999854
No 58
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=28.58 E-value=60 Score=30.51 Aligned_cols=16 Identities=31% Similarity=0.516 Sum_probs=14.2
Q ss_pred CeEEcccccceecCHH
Q 011566 348 GVIVDSGSTFTFMEGP 363 (483)
Q Consensus 348 ~~iiDSGTt~~~lp~~ 363 (483)
.++||||++.+|+|..
T Consensus 28 ~v~~DTGSs~~Wv~~~ 43 (324)
T 1am5_A 28 KVIFDTGSSNLWVSSS 43 (324)
T ss_dssp EEEEETTCCCEEECBT
T ss_pred EEEEeCCCcceEEecC
Confidence 4899999999999965
No 59
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=28.40 E-value=54 Score=32.06 Aligned_cols=16 Identities=19% Similarity=0.295 Sum_probs=13.9
Q ss_pred CeEEcccccceecCHH
Q 011566 348 GVIVDSGSTFTFMEGP 363 (483)
Q Consensus 348 ~~iiDSGTt~~~lp~~ 363 (483)
.++||||++.+|+|-.
T Consensus 37 ~v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 37 PVLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEETTCSSEEEECS
T ss_pred EEEEECCCCceeECCC
Confidence 4899999999999854
No 60
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=27.87 E-value=60 Score=30.79 Aligned_cols=15 Identities=33% Similarity=0.676 Sum_probs=13.5
Q ss_pred CeEEcccccceecCH
Q 011566 348 GVIVDSGSTFTFMEG 362 (483)
Q Consensus 348 ~~iiDSGTt~~~lp~ 362 (483)
.++||||++.+|++.
T Consensus 28 ~v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 28 SLLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEEETTCCCCEECS
T ss_pred EEEEeCCChhheecC
Confidence 489999999999985
No 61
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=27.50 E-value=55 Score=30.99 Aligned_cols=16 Identities=25% Similarity=0.474 Sum_probs=13.8
Q ss_pred CeEEcccccceecCHH
Q 011566 348 GVIVDSGSTFTFMEGP 363 (483)
Q Consensus 348 ~~iiDSGTt~~~lp~~ 363 (483)
.++||||++.+|+|..
T Consensus 28 ~v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 28 TVVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEEETTCCCEEEEEE
T ss_pred EEEEcCCCCCEEEecC
Confidence 4899999999999843
No 62
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=27.46 E-value=50 Score=31.24 Aligned_cols=16 Identities=19% Similarity=0.237 Sum_probs=14.2
Q ss_pred CeEEcccccceecCHH
Q 011566 348 GVIVDSGSTFTFMEGP 363 (483)
Q Consensus 348 ~~iiDSGTt~~~lp~~ 363 (483)
.++||||++.+|+|..
T Consensus 31 ~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 31 NLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEETTCCCEEECBT
T ss_pred EEEECCCCCCeEEecC
Confidence 4899999999999975
No 63
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=27.42 E-value=50 Score=31.23 Aligned_cols=17 Identities=18% Similarity=0.130 Sum_probs=14.6
Q ss_pred CeEEcccccceecCHHH
Q 011566 348 GVIVDSGSTFTFMEGPL 364 (483)
Q Consensus 348 ~~iiDSGTt~~~lp~~~ 364 (483)
.++||||++.+++|..-
T Consensus 31 ~v~~DTGSs~lWv~~~~ 47 (329)
T 3c9x_A 31 PLDFDTGSSDLWVFSSE 47 (329)
T ss_dssp EEEEETTCCCEEECBTT
T ss_pred EEEEcCCCCCeEEecCC
Confidence 48999999999999753
No 64
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=26.84 E-value=57 Score=30.86 Aligned_cols=16 Identities=31% Similarity=0.480 Sum_probs=13.8
Q ss_pred CeEEcccccceecCHH
Q 011566 348 GVIVDSGSTFTFMEGP 363 (483)
Q Consensus 348 ~~iiDSGTt~~~lp~~ 363 (483)
.++||||++.+|+|..
T Consensus 28 ~v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 28 TVIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEETTCCCEEEEEE
T ss_pred EEEEeCCCCceEEecC
Confidence 4899999999999854
No 65
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=26.66 E-value=61 Score=30.54 Aligned_cols=16 Identities=31% Similarity=0.509 Sum_probs=14.1
Q ss_pred CeEEcccccceecCHH
Q 011566 348 GVIVDSGSTFTFMEGP 363 (483)
Q Consensus 348 ~~iiDSGTt~~~lp~~ 363 (483)
.++||||++.+|+|..
T Consensus 29 ~v~~DTGSs~lWv~~~ 44 (329)
T 1dpj_A 29 KVILDTGSSNLWVPSN 44 (329)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCcCeEEecC
Confidence 4899999999999865
No 66
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=26.35 E-value=50 Score=25.47 Aligned_cols=31 Identities=23% Similarity=0.393 Sum_probs=24.2
Q ss_pred ceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCH
Q 011566 317 FYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEG 362 (483)
Q Consensus 317 ~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~ 362 (483)
.|.=.+..+.|+|+... +++|||+-.+.+.+
T Consensus 5 l~~rP~vtvkI~Gq~~e---------------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 5 LWKRPLVTIKIGGQLKE---------------ALLDTGADDTIIEE 35 (99)
T ss_dssp SSSCCEEEEEETTEEEE---------------EEECTTCSSEEESC
T ss_pred ccCCCEEEEEECCEEEE---------------EEeccCCCcEEEec
Confidence 35445566899998753 79999999998875
No 67
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=24.73 E-value=80 Score=29.88 Aligned_cols=16 Identities=38% Similarity=0.584 Sum_probs=13.8
Q ss_pred CeEEcccccceecCHH
Q 011566 348 GVIVDSGSTFTFMEGP 363 (483)
Q Consensus 348 ~~iiDSGTt~~~lp~~ 363 (483)
.++||||++.+|+|..
T Consensus 28 ~v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 28 NVIVDTGSSDLWIPDS 43 (342)
T ss_dssp EEEEETTCCCEEEEEE
T ss_pred EEEEeCCCCCeEEecC
Confidence 4899999999999843
No 68
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=24.51 E-value=57 Score=30.56 Aligned_cols=16 Identities=25% Similarity=0.391 Sum_probs=14.1
Q ss_pred CeEEcccccceecCHH
Q 011566 348 GVIVDSGSTFTFMEGP 363 (483)
Q Consensus 348 ~~iiDSGTt~~~lp~~ 363 (483)
.++||||++.+++|..
T Consensus 27 ~v~~DTGSs~~Wv~~~ 42 (320)
T 4aa9_A 27 TVVFDTGSSDLWVPSI 42 (320)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCCceEEcCC
Confidence 4899999999999864
No 69
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=24.16 E-value=66 Score=24.97 Aligned_cols=34 Identities=9% Similarity=0.273 Sum_probs=25.9
Q ss_pred ceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHHHH
Q 011566 317 FYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLF 365 (483)
Q Consensus 317 ~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~ 365 (483)
.|.=.+..+.|+|+.. .+++|||+-.+.+.....
T Consensus 5 l~~RP~v~v~I~Gq~~---------------e~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 5 LEKRPTTIVLINDTPL---------------NVLLDTGADTSVLTTAHY 38 (104)
T ss_dssp SSSCCEEEEEETTEEE---------------EEEECTTCSSCEEEHHHH
T ss_pred ccCCCEEEEEECCEEE---------------EEEeccCCCcEEEccccC
Confidence 3444455689999864 379999999999997654
No 70
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=23.96 E-value=57 Score=30.77 Aligned_cols=16 Identities=19% Similarity=0.331 Sum_probs=14.0
Q ss_pred CeEEcccccceecCHH
Q 011566 348 GVIVDSGSTFTFMEGP 363 (483)
Q Consensus 348 ~~iiDSGTt~~~lp~~ 363 (483)
.++||||++.+|+|..
T Consensus 31 ~v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 31 NLDFDTGSSDLWIAST 46 (325)
T ss_dssp EEEEETTCCCCEEEBT
T ss_pred EEEEcCCCCCEEEccC
Confidence 4899999999999864
No 71
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=23.84 E-value=76 Score=29.96 Aligned_cols=41 Identities=22% Similarity=0.317 Sum_probs=27.6
Q ss_pred ceeeeceeCCCCCCCCCCcceeEEeeEEEECc--EEeeeCCccccCCCCCCCCeEEcccccceecCHH
Q 011566 298 LSYTPFYKNPVGSSSAFGEFYYVGLRQIIVGS--KHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGP 363 (483)
Q Consensus 298 l~~~p~~~~~~~~~~~~~~~w~v~l~~i~vg~--~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~ 363 (483)
...+|+.... +..|.++ |.||. +.+ .++||||++.+++|..
T Consensus 7 ~~~~~l~n~~-------d~~Y~~~---i~iGtP~q~~---------------~v~~DTGSs~~Wv~~~ 49 (341)
T 3k1w_A 7 TSSVILTNYM-------DTQYYGE---IGIGTPPQTF---------------KVVFDTGSSNVWVPSS 49 (341)
T ss_dssp CEEEEEEEET-------TTEEEEE---EEETTTTEEE---------------EEEEETTCCCEEEEBT
T ss_pred CccccceEcc-------CCEEEEE---EEEcCCCcEE---------------EEEEeCCCcceEEccC
Confidence 3456666532 3456654 77774 443 4899999999999864
No 72
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=23.62 E-value=49 Score=32.61 Aligned_cols=45 Identities=22% Similarity=0.321 Sum_probs=29.8
Q ss_pred CCceeeeceeCCCCCCCCCCcceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCH
Q 011566 296 PGLSYTPFYKNPVGSSSAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEG 362 (483)
Q Consensus 296 g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~ 362 (483)
..-..+|+.++.. ...|.++ |+||.-..+ ..++||||+.++|+|-
T Consensus 6 ~~~~~~pv~~d~~------~~~Y~~~---i~iGTPpq~-------------~~v~~DTGS~~lWv~c 50 (413)
T 3vla_A 6 PSALVVPVKKDAS------TLQYVTT---INQRTPLVS-------------ENLVVDLGGRFLWVDC 50 (413)
T ss_dssp CSEEEEEEEECTT------TCCEEEE---EEETTTTEE-------------EEEEEETTCSSEEEEC
T ss_pred CccEEEEeeecCC------CCeEEEE---EEcCCCCcc-------------eEEEEeCCChhhhccc
Confidence 3345688887642 3456555 667652211 3589999999999985
No 73
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=23.24 E-value=59 Score=25.06 Aligned_cols=30 Identities=13% Similarity=0.311 Sum_probs=23.8
Q ss_pred ceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecC
Q 011566 317 FYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFME 361 (483)
Q Consensus 317 ~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp 361 (483)
.|.=.+..+.|+|+.+. +++|||.-.+.+.
T Consensus 5 l~~RP~vti~I~Gq~~e---------------~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 5 LWKRPVVTAYIEGQPVE---------------VLLDTGADDSIVA 34 (99)
T ss_dssp SSSCCEEEEEETTEEEE---------------EEECTTCSSCEES
T ss_pred cccCCeEEEEECCEEEE---------------EEEecCCCceEEc
Confidence 46556667999998764 7999999999884
No 74
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=23.18 E-value=63 Score=31.21 Aligned_cols=16 Identities=31% Similarity=0.455 Sum_probs=14.0
Q ss_pred CeEEcccccceecCHH
Q 011566 348 GVIVDSGSTFTFMEGP 363 (483)
Q Consensus 348 ~~iiDSGTt~~~lp~~ 363 (483)
.++||||++.+|+|..
T Consensus 72 ~v~~DTGSs~lWV~s~ 87 (370)
T 3psg_A 72 TVIFDTGSSNLWVPSV 87 (370)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCCccEEECC
Confidence 4899999999999963
No 75
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=22.84 E-value=75 Score=30.00 Aligned_cols=16 Identities=38% Similarity=0.520 Sum_probs=13.8
Q ss_pred CeEEcccccceecCHH
Q 011566 348 GVIVDSGSTFTFMEGP 363 (483)
Q Consensus 348 ~~iiDSGTt~~~lp~~ 363 (483)
.++||||++.+++|..
T Consensus 28 ~v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 28 NVIVDTGSSDLWVPDV 43 (342)
T ss_dssp EEEEETTCCCEEEEEE
T ss_pred EEEEECCCcceEEEcC
Confidence 4899999999999854
No 76
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=22.79 E-value=73 Score=25.32 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=25.7
Q ss_pred cceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHH
Q 011566 316 EFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGP 363 (483)
Q Consensus 316 ~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~ 363 (483)
..|.=.+. +.|+|+.+. +++|||+-.+.+.+.
T Consensus 10 ~l~~rP~v-ikI~Gq~~e---------------aLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPIK---------------FLLDTGADITVLNRR 41 (116)
T ss_dssp SSSCCEEE-EEETTEEEE---------------EEECTTCSSCEEEGG
T ss_pred cccCCCEE-EEECCEEEE---------------EEecCCCCcEEEccc
Confidence 35766777 999998753 799999999988863
No 77
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=22.54 E-value=54 Score=31.01 Aligned_cols=30 Identities=17% Similarity=0.123 Sum_probs=22.5
Q ss_pred cceeEEeeEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHH
Q 011566 316 EFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGP 363 (483)
Q Consensus 316 ~~w~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~ 363 (483)
..|.++ |+||.+.+ .++||||++.+|+|..
T Consensus 17 ~~Y~~~---i~iG~Q~~---------------~v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 17 TQYAGI---TKIGNQNF---------------LTVFDSTSCNVVVASQ 46 (330)
T ss_dssp TTSEEE---EEETTEEE---------------EEEEETTCCCEEEECT
T ss_pred CEEEEE---EEECCEEE---------------EEEEeCCCcceEEecC
Confidence 456654 77885554 3899999999999864
No 78
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=22.40 E-value=67 Score=30.27 Aligned_cols=16 Identities=25% Similarity=0.362 Sum_probs=14.1
Q ss_pred CeEEcccccceecCHH
Q 011566 348 GVIVDSGSTFTFMEGP 363 (483)
Q Consensus 348 ~~iiDSGTt~~~lp~~ 363 (483)
.++||||++.+|+|..
T Consensus 28 ~v~~DTGSs~lWv~~~ 43 (329)
T 1htr_B 28 LVLFDTGSSNLWVPSV 43 (329)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEcCCCccEEEecC
Confidence 4899999999999864
No 79
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=22.01 E-value=70 Score=31.13 Aligned_cols=16 Identities=25% Similarity=0.509 Sum_probs=14.3
Q ss_pred CeEEcccccceecCHH
Q 011566 348 GVIVDSGSTFTFMEGP 363 (483)
Q Consensus 348 ~~iiDSGTt~~~lp~~ 363 (483)
.++||||++.+|+|..
T Consensus 77 ~vi~DTGSs~lWV~s~ 92 (383)
T 2x0b_A 77 KVVFDTGSSNVWVPSS 92 (383)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCCCeEEecc
Confidence 4899999999999975
No 80
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=21.21 E-value=60 Score=28.58 Aligned_cols=29 Identities=17% Similarity=0.187 Sum_probs=24.8
Q ss_pred cEEEEEEeCCCCCceeeEEEEcCCCceeeeCC
Q 011566 103 GYSISLSFGTPPQASTPFIFDTGSSLVWFPCT 134 (483)
Q Consensus 103 ~Y~~~i~iGtP~q~~~~v~iDTGSs~~Wv~~~ 134 (483)
.=.+.+.||. |. +..++|||-+++-+...
T Consensus 112 rP~~~iki~G--q~-~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 112 RPLVTIRIGG--QL-KEALLDTGADDTVIEEL 140 (203)
T ss_dssp CCEEEEEETT--EE-EEEEECTTCSSCEECSC
T ss_pred CCcEEEEECC--EE-EeeeecccCCceeeecc
Confidence 3568899999 88 99999999999999644
No 81
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=20.85 E-value=81 Score=25.67 Aligned_cols=26 Identities=23% Similarity=0.451 Sum_probs=20.8
Q ss_pred eEEEECcEEeeeCCccccCCCCCCCCeEEcccccceecCHH
Q 011566 323 RQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGP 363 (483)
Q Consensus 323 ~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~ 363 (483)
..+.|+|+.+. ++||||...+.|++.
T Consensus 25 v~i~I~G~~~~---------------~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 25 ITLKVGGQPVT---------------FLVDTGAQHSVLTQN 50 (132)
T ss_dssp EEEEETTEEEE---------------EEECTTCSSCEECSC
T ss_pred EEEEECCEEEE---------------EEEeCCCCeEEEccc
Confidence 34788887753 799999999999864
No 82
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=20.78 E-value=75 Score=31.76 Aligned_cols=16 Identities=25% Similarity=0.403 Sum_probs=14.2
Q ss_pred CeEEcccccceecCHH
Q 011566 348 GVIVDSGSTFTFMEGP 363 (483)
Q Consensus 348 ~~iiDSGTt~~~lp~~ 363 (483)
.++||||++.+|+|..
T Consensus 154 ~vi~DTGSs~lWV~~~ 169 (453)
T 2bju_A 154 TFILDTGSANLWVPSV 169 (453)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEECCCcceEEecc
Confidence 4899999999999865
Done!