Query 011567
Match_columns 483
No_of_seqs 364 out of 3033
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 02:48:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011567.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011567hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1358 Serine palmitoyltransf 100.0 1.3E-92 2.7E-97 663.0 32.3 443 36-479 20-467 (467)
2 PLN02822 serine palmitoyltrans 100.0 4.3E-86 9.3E-91 682.0 55.1 481 1-481 1-481 (481)
3 COG0156 BioF 7-keto-8-aminopel 100.0 9.8E-68 2.1E-72 519.4 39.6 362 96-474 26-387 (388)
4 PLN02955 8-amino-7-oxononanoat 100.0 3.7E-59 8E-64 468.7 39.9 346 107-479 100-463 (476)
5 KOG1359 Glycine C-acetyltransf 100.0 1.5E-56 3.2E-61 405.2 30.1 361 93-477 49-412 (417)
6 KOG1360 5-aminolevulinate synt 100.0 5.3E-53 1.2E-57 396.3 31.8 351 109-478 171-525 (570)
7 PLN03227 serine palmitoyltrans 100.0 5.8E-51 1.3E-55 412.0 39.8 368 112-481 1-386 (392)
8 TIGR01821 5aminolev_synth 5-am 100.0 1.2E-49 2.6E-54 405.8 43.1 353 107-478 43-397 (402)
9 PLN02483 serine palmitoyltrans 100.0 1E-49 2.2E-54 412.3 42.3 361 107-479 98-468 (489)
10 PRK13393 5-aminolevulinate syn 100.0 2.9E-49 6.2E-54 403.3 43.1 353 107-478 43-397 (406)
11 PRK09064 5-aminolevulinate syn 100.0 1.1E-48 2.4E-53 399.5 43.1 352 108-478 45-398 (407)
12 KOG1357 Serine palmitoyltransf 100.0 2.7E-50 5.9E-55 384.6 25.4 356 110-477 137-502 (519)
13 PRK13392 5-aminolevulinate syn 100.0 1.8E-46 3.9E-51 383.4 41.5 353 107-478 44-398 (410)
14 COG4992 ArgD Ornithine/acetylo 100.0 6.7E-47 1.4E-51 364.3 32.3 343 93-481 25-402 (404)
15 TIGR01822 2am3keto_CoA 2-amino 100.0 3.1E-44 6.7E-49 365.4 43.7 369 92-478 20-390 (393)
16 COG0160 GabT 4-aminobutyrate a 100.0 4.2E-44 9.2E-49 355.4 37.3 359 91-478 37-446 (447)
17 PRK07179 hypothetical protein; 100.0 1.4E-43 3.1E-48 361.6 40.4 348 107-478 52-399 (407)
18 TIGR01825 gly_Cac_T_rel pyrido 100.0 6.7E-42 1.5E-46 347.3 42.1 366 92-477 16-381 (385)
19 COG0001 HemL Glutamate-1-semia 100.0 2.5E-42 5.5E-47 336.1 35.8 353 92-480 35-431 (432)
20 PRK05937 8-amino-7-oxononanoat 100.0 8.3E-42 1.8E-46 344.0 39.6 340 109-478 4-351 (370)
21 PRK05958 8-amino-7-oxononanoat 100.0 1.4E-41 3E-46 345.0 41.1 365 90-474 20-384 (385)
22 TIGR03246 arg_catab_astC succi 100.0 2.7E-42 5.8E-47 350.3 35.2 344 92-478 17-396 (397)
23 PLN02760 4-aminobutyrate:pyruv 100.0 3E-42 6.6E-47 356.0 34.8 358 91-479 70-493 (504)
24 PRK12403 putative aminotransfe 100.0 1.1E-41 2.4E-46 349.9 37.4 358 92-479 36-454 (460)
25 TIGR00858 bioF 8-amino-7-oxono 100.0 5.5E-41 1.2E-45 337.3 40.4 358 96-472 3-360 (360)
26 COG0161 BioA Adenosylmethionin 100.0 1.7E-41 3.8E-46 334.4 33.5 355 93-481 27-447 (449)
27 PRK06939 2-amino-3-ketobutyrat 100.0 4.5E-40 9.7E-45 335.3 42.4 367 94-478 26-394 (397)
28 PRK07505 hypothetical protein; 100.0 3.9E-40 8.4E-45 335.7 40.9 360 90-477 26-399 (402)
29 PRK08117 4-aminobutyrate amino 100.0 1.4E-40 3.1E-45 341.3 35.0 358 93-480 26-432 (433)
30 PRK03715 argD acetylornithine 100.0 1.3E-40 2.9E-45 336.2 32.9 342 93-478 19-394 (395)
31 PRK11522 putrescine--2-oxoglut 100.0 6.2E-40 1.3E-44 335.8 35.3 354 92-479 63-453 (459)
32 PRK00615 glutamate-1-semialdeh 100.0 6.8E-40 1.5E-44 333.1 34.9 375 71-480 12-431 (433)
33 PRK06105 aminotransferase; Pro 100.0 1.2E-39 2.7E-44 334.7 37.1 359 92-479 30-451 (460)
34 PRK05965 hypothetical protein; 100.0 9.9E-40 2.2E-44 335.3 36.4 358 92-481 28-451 (459)
35 PRK04073 rocD ornithine--oxo-a 100.0 9.5E-40 2.1E-44 332.0 35.7 337 92-475 22-395 (396)
36 PRK08593 4-aminobutyrate amino 100.0 1.2E-39 2.7E-44 333.7 36.6 364 92-480 24-432 (445)
37 PRK12381 bifunctional succinyl 100.0 1.2E-39 2.6E-44 331.9 35.2 348 92-481 21-403 (406)
38 PRK07482 hypothetical protein; 100.0 1.3E-39 2.8E-44 334.7 35.4 357 92-479 32-456 (461)
39 TIGR03372 putres_am_tran putre 100.0 1.3E-39 2.8E-44 331.2 34.4 349 93-475 58-442 (442)
40 KOG1402 Ornithine aminotransfe 100.0 1.6E-40 3.4E-45 305.7 24.8 365 63-476 20-426 (427)
41 PLN02482 glutamate-1-semialdeh 100.0 1.6E-39 3.5E-44 332.9 35.3 375 68-477 55-473 (474)
42 PRK06943 adenosylmethionine--8 100.0 2.3E-39 5E-44 331.8 36.4 351 92-480 36-449 (453)
43 PRK06062 hypothetical protein; 100.0 2.5E-39 5.4E-44 331.7 36.2 355 91-478 34-446 (451)
44 PRK06916 adenosylmethionine--8 100.0 4E-39 8.8E-44 330.9 37.6 384 60-479 7-457 (460)
45 PRK12389 glutamate-1-semialdeh 100.0 7.5E-39 1.6E-43 327.1 37.4 375 68-477 8-427 (428)
46 PRK08742 adenosylmethionine--8 100.0 1.1E-38 2.5E-43 327.3 38.2 351 94-479 48-469 (472)
47 PRK07986 adenosylmethionine--8 100.0 1.5E-39 3.2E-44 330.6 31.3 342 93-477 26-423 (428)
48 PRK06173 adenosylmethionine--8 100.0 5.1E-39 1.1E-43 327.0 34.9 345 94-479 28-427 (429)
49 PRK07678 aminotransferase; Val 100.0 7.5E-39 1.6E-43 328.4 36.3 360 93-478 30-450 (451)
50 TIGR01885 Orn_aminotrans ornit 100.0 9.7E-39 2.1E-43 325.3 37.0 344 93-475 20-400 (401)
51 PRK07030 adenosylmethionine--8 100.0 1.1E-38 2.3E-43 327.7 36.9 352 93-479 30-448 (466)
52 PRK06082 4-aminobutyrate amino 100.0 6.1E-39 1.3E-43 329.2 34.7 356 92-481 54-455 (459)
53 PRK13360 omega amino acid--pyr 100.0 7.1E-39 1.5E-43 327.5 34.5 352 92-478 28-441 (442)
54 PRK07481 hypothetical protein; 100.0 1.1E-38 2.5E-43 326.9 35.9 363 92-479 24-447 (449)
55 PRK06541 hypothetical protein; 100.0 2.4E-38 5.1E-43 324.9 38.0 360 93-479 35-457 (460)
56 PRK05093 argD bifunctional N-s 100.0 1.1E-38 2.4E-43 324.9 35.4 346 92-479 22-402 (403)
57 PLN02624 ornithine-delta-amino 100.0 2.8E-38 6.1E-43 326.2 38.6 350 92-478 57-445 (474)
58 PRK07036 hypothetical protein; 100.0 2.5E-38 5.5E-43 325.2 37.4 357 92-479 33-454 (466)
59 PRK05964 adenosylmethionine--8 100.0 1.6E-38 3.6E-43 325.0 35.8 351 91-477 23-422 (423)
60 PRK06058 4-aminobutyrate amino 100.0 1.3E-38 2.8E-43 326.8 34.4 360 92-477 38-442 (443)
61 PRK09221 beta alanine--pyruvat 100.0 1.8E-38 3.9E-43 324.8 35.1 352 92-478 31-444 (445)
62 PRK07480 putative aminotransfe 100.0 3.4E-38 7.3E-43 323.5 37.0 358 92-480 32-451 (456)
63 PRK06938 diaminobutyrate--2-ox 100.0 1.8E-38 3.9E-43 325.8 34.8 359 91-480 44-463 (464)
64 PRK05639 4-aminobutyrate amino 100.0 3.6E-38 7.8E-43 323.0 36.7 359 92-480 35-446 (457)
65 PRK03244 argD acetylornithine 100.0 1.8E-38 3.9E-43 323.3 33.2 341 92-478 25-395 (398)
66 PRK07046 aminotransferase; Val 100.0 9.7E-38 2.1E-42 319.5 37.4 374 67-479 31-452 (453)
67 PRK06931 diaminobutyrate--2-ox 100.0 8.3E-38 1.8E-42 320.8 37.0 363 92-480 40-457 (459)
68 PRK01278 argD acetylornithine 100.0 3.7E-38 8.1E-43 319.9 33.8 340 92-477 13-388 (389)
69 PRK09264 diaminobutyrate--2-ox 100.0 5.7E-38 1.2E-42 320.6 35.0 355 92-481 21-420 (425)
70 cd06454 KBL_like KBL_like; thi 100.0 1.7E-37 3.7E-42 310.8 37.5 348 109-474 1-348 (349)
71 PRK08360 4-aminobutyrate amino 100.0 1.2E-37 2.6E-42 318.5 37.1 358 92-479 23-428 (443)
72 PRK05769 4-aminobutyrate amino 100.0 1.4E-37 3E-42 318.2 37.3 354 92-479 36-441 (441)
73 PRK00062 glutamate-1-semialdeh 100.0 9.4E-38 2E-42 319.3 36.0 352 92-478 32-425 (426)
74 PRK07495 4-aminobutyrate amino 100.0 1.5E-37 3.3E-42 316.4 37.0 357 93-478 23-422 (425)
75 PRK00854 rocD ornithine--oxo-a 100.0 9.9E-38 2.1E-42 318.2 35.4 341 92-476 23-400 (401)
76 PRK07483 hypothetical protein; 100.0 7.1E-38 1.5E-42 320.2 34.3 365 92-480 12-440 (443)
77 TIGR00709 dat 2,4-diaminobutyr 100.0 2.9E-37 6.3E-42 316.5 37.0 365 92-480 21-438 (442)
78 PRK02936 argD acetylornithine 100.0 8.5E-38 1.8E-42 316.2 32.3 338 92-475 11-377 (377)
79 TIGR02407 ectoine_ectB diamino 100.0 1.7E-37 3.6E-42 315.7 34.3 350 92-477 17-412 (412)
80 PRK06917 hypothetical protein; 100.0 2.3E-37 5.1E-42 316.8 34.1 366 94-481 15-441 (447)
81 cd00610 OAT_like Acetyl ornith 100.0 4E-37 8.7E-42 315.2 34.7 355 91-475 17-413 (413)
82 PTZ00125 ornithine aminotransf 100.0 5E-37 1.1E-41 313.1 35.2 349 92-481 13-399 (400)
83 PRK06777 4-aminobutyrate amino 100.0 1.1E-36 2.4E-41 310.5 37.3 355 93-476 23-420 (421)
84 PRK04612 argD acetylornithine 100.0 9.3E-37 2E-41 309.1 35.6 349 92-481 22-407 (408)
85 PRK05630 adenosylmethionine--8 100.0 2.4E-37 5.2E-42 314.4 31.4 349 92-477 22-420 (422)
86 PRK06149 hypothetical protein; 100.0 7E-37 1.5E-41 339.7 35.8 359 91-478 566-971 (972)
87 PLN00144 acetylornithine trans 100.0 5.9E-37 1.3E-41 308.8 31.9 339 96-478 1-381 (382)
88 TIGR00508 bioA adenosylmethion 100.0 5.5E-37 1.2E-41 312.8 32.0 344 93-477 28-426 (427)
89 KOG1404 Alanine-glyoxylate ami 100.0 2.1E-37 4.6E-42 291.9 26.6 353 90-471 30-432 (442)
90 PRK08297 L-lysine aminotransfe 100.0 6E-37 1.3E-41 313.4 31.6 347 94-478 28-442 (443)
91 PRK06148 hypothetical protein; 100.0 8.5E-37 1.8E-41 339.0 34.8 361 91-479 605-1012(1013)
92 TIGR00699 GABAtrns_euk 4-amino 100.0 2.8E-37 6E-42 314.5 28.1 343 91-475 39-464 (464)
93 PRK09792 4-aminobutyrate trans 100.0 3.4E-36 7.3E-41 306.9 36.2 355 93-476 23-420 (421)
94 PRK06918 4-aminobutyrate amino 100.0 7.8E-36 1.7E-40 307.1 39.2 361 93-481 37-447 (451)
95 TIGR00713 hemL glutamate-1-sem 100.0 3.2E-36 6.9E-41 308.9 35.7 375 68-477 4-422 (423)
96 TIGR00700 GABAtrnsam 4-aminobu 100.0 5.5E-36 1.2E-40 306.0 35.0 356 92-476 15-419 (420)
97 PRK04013 argD acetylornithine/ 100.0 2.6E-36 5.7E-41 300.1 31.5 332 90-480 4-363 (364)
98 PRK06209 glutamate-1-semialdeh 100.0 1.4E-35 3.1E-40 303.0 32.3 347 92-478 30-406 (431)
99 PRK02627 acetylornithine amino 100.0 2.1E-34 4.6E-39 293.4 36.0 341 92-478 21-395 (396)
100 TIGR03251 LAT_fam L-lysine 6-t 100.0 3.3E-35 7.1E-40 300.3 29.5 340 95-473 22-430 (431)
101 PRK08088 4-aminobutyrate amino 100.0 8E-34 1.7E-38 290.6 35.7 358 92-477 23-423 (425)
102 KOG1401 Acetylornithine aminot 100.0 6.8E-34 1.5E-38 270.4 29.7 347 91-478 37-431 (433)
103 PRK04260 acetylornithine amino 100.0 1E-33 2.2E-38 285.9 29.9 333 93-474 12-374 (375)
104 PLN02974 adenosylmethionine-8- 100.0 3E-33 6.4E-38 300.2 34.1 357 92-475 339-816 (817)
105 TIGR00707 argD acetylornithine 100.0 3.8E-33 8.1E-38 282.6 32.9 338 91-475 8-379 (379)
106 TIGR03576 pyridox_MJ0158 pyrid 100.0 5E-33 1.1E-37 276.0 28.4 309 117-475 27-345 (346)
107 PRK13034 serine hydroxymethylt 100.0 2.5E-32 5.4E-37 278.1 30.7 335 110-476 29-391 (416)
108 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 6E-32 1.3E-36 272.4 30.5 328 126-477 18-368 (370)
109 PF00202 Aminotran_3: Aminotra 100.0 1.9E-32 4E-37 271.6 21.5 288 95-405 1-337 (339)
110 PLN03226 serine hydroxymethylt 100.0 5E-29 1.1E-33 256.0 32.1 336 110-477 35-419 (475)
111 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 1.1E-28 2.5E-33 249.9 33.4 346 110-478 19-382 (387)
112 PRK13580 serine hydroxymethylt 100.0 1.4E-28 3.1E-33 247.9 32.3 341 109-477 49-445 (493)
113 PF00155 Aminotran_1_2: Aminot 100.0 1.6E-28 3.5E-33 247.2 25.1 335 110-471 2-363 (363)
114 KOG1403 Predicted alanine-glyo 100.0 3.8E-28 8.3E-33 221.3 21.4 362 91-477 28-437 (452)
115 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 2.7E-26 5.8E-31 230.8 31.3 329 125-475 10-360 (361)
116 cd06502 TA_like Low-specificit 100.0 1.2E-26 2.6E-31 231.3 24.9 324 113-473 1-337 (338)
117 PRK06108 aspartate aminotransf 100.0 2.4E-25 5.2E-30 225.7 34.4 337 110-476 25-381 (382)
118 TIGR03392 FeS_syn_CsdA cystein 100.0 4.8E-25 1E-29 224.7 35.8 337 108-477 16-395 (398)
119 PRK10874 cysteine sulfinate de 99.9 3.9E-25 8.5E-30 225.5 33.6 337 109-478 20-399 (401)
120 COG0436 Aspartate/tyrosine/aro 99.9 5.7E-25 1.2E-29 221.4 33.5 339 109-477 28-391 (393)
121 TIGR01976 am_tr_V_VC1184 cyste 99.9 4.1E-25 8.9E-30 225.2 32.3 328 109-471 18-397 (397)
122 PLN02721 threonine aldolase 99.9 1.6E-25 3.5E-30 224.5 28.0 331 110-476 6-351 (353)
123 PRK05764 aspartate aminotransf 99.9 6E-25 1.3E-29 223.7 32.3 339 108-477 30-391 (393)
124 PLN00175 aminotransferase fami 99.9 9.2E-25 2E-29 223.0 33.6 341 109-476 54-412 (413)
125 PTZ00094 serine hydroxymethylt 99.9 2.2E-25 4.7E-30 229.9 29.0 338 109-477 34-408 (452)
126 PRK02731 histidinol-phosphate 99.9 8.8E-25 1.9E-29 220.4 32.6 324 107-476 30-365 (367)
127 cd00378 SHMT Serine-glycine hy 99.9 2.6E-25 5.5E-30 227.1 28.8 339 109-477 19-385 (402)
128 PRK00011 glyA serine hydroxyme 99.9 6.2E-25 1.3E-29 225.1 31.1 338 109-477 25-389 (416)
129 PRK13520 L-tyrosine decarboxyl 99.9 1.2E-24 2.5E-29 219.8 32.5 316 124-476 32-370 (371)
130 PRK09295 bifunctional cysteine 99.9 1.7E-24 3.7E-29 221.1 33.9 334 109-476 24-403 (406)
131 PRK09082 methionine aminotrans 99.9 2.7E-24 5.9E-29 218.1 33.1 337 109-473 30-385 (386)
132 COG0520 csdA Selenocysteine ly 99.9 2.3E-24 4.9E-29 216.8 32.0 334 110-476 24-404 (405)
133 TIGR01979 sufS cysteine desulf 99.9 3.7E-24 8.1E-29 218.6 34.2 335 110-478 20-402 (403)
134 PRK06207 aspartate aminotransf 99.9 9.7E-24 2.1E-28 215.1 36.9 341 109-478 39-403 (405)
135 PRK07324 transaminase; Validat 99.9 2.1E-24 4.5E-29 217.7 30.9 332 106-478 23-371 (373)
136 PRK07682 hypothetical protein; 99.9 6.7E-24 1.4E-28 214.8 33.9 337 110-477 21-376 (378)
137 TIGR03812 tyr_de_CO2_Arch tyro 99.9 7.2E-24 1.6E-28 214.2 33.5 326 107-473 21-372 (373)
138 PLN02855 Bifunctional selenocy 99.9 5.9E-24 1.3E-28 218.3 33.3 337 110-478 34-419 (424)
139 PRK05957 aspartate aminotransf 99.9 1.4E-23 2.9E-28 213.1 35.3 342 110-480 28-388 (389)
140 cd06451 AGAT_like Alanine-glyo 99.9 8.4E-24 1.8E-28 212.3 33.1 291 153-475 31-355 (356)
141 PRK06290 aspartate aminotransf 99.9 1.1E-23 2.4E-28 214.5 34.1 340 108-478 43-406 (410)
142 cd06453 SufS_like Cysteine des 99.9 7.3E-24 1.6E-28 214.2 32.2 319 124-471 11-373 (373)
143 COG1104 NifS Cysteine sulfinat 99.9 7E-24 1.5E-28 205.6 30.4 333 111-479 4-379 (386)
144 PRK03158 histidinol-phosphate 99.9 7.3E-24 1.6E-28 213.0 31.5 318 109-474 29-358 (359)
145 cd00609 AAT_like Aspartate ami 99.9 9.4E-24 2E-28 210.9 32.2 330 113-473 2-350 (350)
146 PRK02948 cysteine desulfurase; 99.9 7.2E-24 1.6E-28 214.8 31.5 334 111-479 3-376 (381)
147 TIGR01141 hisC histidinol-phos 99.9 4.8E-24 1E-28 213.3 29.6 317 108-472 18-346 (346)
148 PRK00950 histidinol-phosphate 99.9 6.7E-24 1.4E-28 213.5 30.6 318 106-475 31-360 (361)
149 PRK07681 aspartate aminotransf 99.9 2.2E-23 4.8E-28 212.4 34.6 335 107-473 30-384 (399)
150 PRK06348 aspartate aminotransf 99.9 1.3E-23 2.8E-28 213.0 32.7 331 110-474 30-382 (384)
151 PRK10534 L-threonine aldolase; 99.9 1.4E-24 3E-29 216.0 25.0 320 111-476 1-332 (333)
152 PRK08361 aspartate aminotransf 99.9 7.6E-24 1.6E-28 215.3 30.9 332 110-477 34-390 (391)
153 TIGR01977 am_tr_V_EF2568 cyste 99.9 1.1E-23 2.3E-28 213.2 31.9 321 124-473 12-375 (376)
154 cd00613 GDC-P Glycine cleavage 99.9 2.4E-24 5.3E-29 219.6 26.9 324 110-471 21-398 (398)
155 PRK08912 hypothetical protein; 99.9 3.3E-23 7.1E-28 210.4 34.3 340 110-476 27-385 (387)
156 PRK12414 putative aminotransfe 99.9 2.8E-23 6E-28 210.5 33.6 337 109-473 29-383 (384)
157 PRK08153 histidinol-phosphate 99.9 2.1E-23 4.6E-28 210.1 32.5 326 110-478 33-366 (369)
158 PRK03317 histidinol-phosphate 99.9 2.6E-23 5.7E-28 209.6 33.2 321 110-479 27-366 (368)
159 PRK08068 transaminase; Reviewe 99.9 3E-23 6.5E-28 210.8 33.8 331 108-473 31-385 (389)
160 TIGR03402 FeS_nifS cysteine de 99.9 2.3E-23 5E-28 211.0 32.6 332 111-478 2-373 (379)
161 PLN00145 tyrosine/nicotianamin 99.9 2.3E-23 4.9E-28 213.6 32.4 343 108-481 51-428 (430)
162 TIGR03540 DapC_direct LL-diami 99.9 7E-23 1.5E-27 207.7 35.1 331 108-473 28-382 (383)
163 PRK07777 aminotransferase; Val 99.9 5.2E-23 1.1E-27 208.9 33.4 339 110-475 25-384 (387)
164 PRK09148 aminotransferase; Val 99.9 8.5E-23 1.8E-27 208.3 34.9 343 107-478 28-391 (405)
165 PRK08960 hypothetical protein; 99.9 4.5E-23 9.9E-28 209.3 32.6 332 108-476 31-386 (387)
166 PRK07683 aminotransferase A; V 99.9 5.9E-23 1.3E-27 208.3 33.2 334 109-477 28-383 (387)
167 PRK08175 aminotransferase; Val 99.9 1.1E-22 2.3E-27 207.0 34.7 341 108-477 28-389 (395)
168 PRK09276 LL-diaminopimelate am 99.9 1.2E-22 2.6E-27 206.2 34.5 331 108-473 30-384 (385)
169 TIGR01814 kynureninase kynuren 99.9 4.6E-23 1E-27 210.4 31.5 325 111-475 28-405 (406)
170 PRK07366 succinyldiaminopimela 99.9 1.1E-22 2.3E-27 206.6 33.8 339 107-474 28-387 (388)
171 PRK05942 aspartate aminotransf 99.9 1.6E-22 3.4E-27 205.8 34.9 331 108-473 34-388 (394)
172 PRK07309 aromatic amino acid a 99.9 9.6E-23 2.1E-27 207.1 33.2 337 109-478 30-389 (391)
173 PLN02187 rooty/superroot1 99.9 6.5E-23 1.4E-27 211.7 32.3 346 108-481 65-442 (462)
174 TIGR01264 tyr_amTase_E tyrosin 99.9 7.4E-23 1.6E-27 208.7 31.9 339 108-477 30-399 (401)
175 TIGR02006 IscS cysteine desulf 99.9 7.6E-23 1.6E-27 208.6 31.9 333 110-478 5-378 (402)
176 PRK06107 aspartate aminotransf 99.9 1.2E-22 2.6E-27 207.1 33.4 346 108-478 32-401 (402)
177 PRK01533 histidinol-phosphate 99.9 4.2E-23 9.2E-28 207.4 29.4 316 107-477 27-355 (366)
178 PRK06225 aspartate aminotransf 99.9 8.8E-23 1.9E-27 206.7 31.9 333 108-479 27-378 (380)
179 PRK08636 aspartate aminotransf 99.9 3.2E-22 6.9E-27 204.1 36.2 350 107-477 31-400 (403)
180 KOG0257 Kynurenine aminotransf 99.9 8.6E-24 1.9E-28 202.9 22.9 337 119-472 40-414 (420)
181 PLN02656 tyrosine transaminase 99.9 9.2E-23 2E-27 208.3 31.9 343 106-479 28-405 (409)
182 PRK13355 bifunctional HTH-doma 99.9 6.7E-23 1.4E-27 215.1 31.5 340 107-478 144-515 (517)
183 PRK08363 alanine aminotransfer 99.9 7.4E-23 1.6E-27 208.5 30.8 340 107-479 28-396 (398)
184 cd00614 CGS_like CGS_like: Cys 99.9 1.8E-23 3.8E-28 210.5 25.5 230 152-406 38-293 (369)
185 PTZ00377 alanine aminotransfer 99.9 4.4E-22 9.6E-27 207.2 36.6 341 126-482 91-480 (481)
186 PTZ00433 tyrosine aminotransfe 99.9 5.2E-22 1.1E-26 203.0 35.0 341 107-478 31-409 (412)
187 PRK09147 succinyldiaminopimela 99.9 3.6E-22 7.8E-27 203.3 33.2 339 107-476 27-395 (396)
188 PRK07568 aspartate aminotransf 99.9 4.4E-22 9.5E-27 202.9 33.7 338 108-480 29-395 (397)
189 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 3.5E-22 7.7E-27 200.4 32.3 290 154-474 31-354 (355)
190 TIGR03537 DapC succinyldiamino 99.9 4.6E-22 9.9E-27 199.2 32.9 323 111-473 2-349 (350)
191 TIGR01265 tyr_nico_aTase tyros 99.9 2.9E-22 6.2E-27 204.4 31.7 339 108-477 30-401 (403)
192 PRK05387 histidinol-phosphate 99.9 3.3E-22 7.2E-27 200.5 31.7 318 108-476 23-352 (353)
193 PRK07550 hypothetical protein; 99.9 8.6E-22 1.9E-26 199.9 35.0 338 108-474 28-384 (386)
194 PRK13238 tnaA tryptophanase/L- 99.9 6.4E-22 1.4E-26 203.1 33.8 353 107-476 34-432 (460)
195 PRK09265 aminotransferase AlaT 99.9 5.8E-22 1.3E-26 202.3 32.9 340 107-478 31-402 (404)
196 TIGR03403 nifS_epsilon cystein 99.9 1E-21 2.2E-26 199.2 34.2 332 111-478 2-376 (382)
197 cd00616 AHBA_syn 3-amino-5-hyd 99.9 6.6E-22 1.4E-26 198.2 32.1 303 130-472 3-352 (352)
198 PLN03026 histidinol-phosphate 99.9 8.4E-22 1.8E-26 199.2 33.0 319 107-474 50-379 (380)
199 PRK07865 N-succinyldiaminopime 99.9 5.5E-22 1.2E-26 199.7 31.5 323 107-472 25-363 (364)
200 TIGR03538 DapC_gpp succinyldia 99.9 5.2E-22 1.1E-26 202.0 30.7 333 107-474 26-392 (393)
201 PLN00143 tyrosine/nicotianamin 99.9 1.1E-21 2.3E-26 200.4 33.0 345 106-481 29-408 (409)
202 PRK07337 aminotransferase; Val 99.9 5E-22 1.1E-26 201.8 30.1 335 108-475 29-387 (388)
203 PRK06234 methionine gamma-lyas 99.9 3E-22 6.6E-27 203.1 28.3 213 154-389 64-286 (400)
204 PRK15481 transcriptional regul 99.9 3.1E-22 6.6E-27 206.0 28.6 327 109-476 85-430 (431)
205 PRK06855 aminotransferase; Val 99.9 1.1E-21 2.4E-26 201.6 32.5 347 108-479 31-431 (433)
206 TIGR01437 selA_rel uncharacter 99.9 2.1E-21 4.5E-26 194.7 33.5 321 109-475 8-363 (363)
207 PF00266 Aminotran_5: Aminotra 99.9 7E-22 1.5E-26 199.5 30.4 324 111-467 2-371 (371)
208 COG0079 HisC Histidinol-phosph 99.9 2E-21 4.4E-26 192.4 32.7 318 110-477 23-354 (356)
209 TIGR02326 transamin_PhnW 2-ami 99.9 2.4E-21 5.1E-26 195.1 33.8 290 153-475 34-360 (363)
210 TIGR01328 met_gam_lyase methio 99.9 2.6E-22 5.6E-27 202.9 26.6 214 154-390 59-280 (391)
211 COG1167 ARO8 Transcriptional r 99.9 1.6E-21 3.4E-26 200.8 32.6 345 109-479 89-457 (459)
212 PRK14807 histidinol-phosphate 99.9 3.6E-21 7.9E-26 192.7 34.5 317 111-475 24-350 (351)
213 PRK03321 putative aminotransfe 99.9 9.6E-22 2.1E-26 197.1 30.3 315 110-476 23-350 (352)
214 TIGR03539 DapC_actino succinyl 99.9 1.5E-21 3.2E-26 196.0 31.6 324 107-471 19-356 (357)
215 PRK04870 histidinol-phosphate 99.9 1.6E-21 3.4E-26 195.9 31.5 319 108-474 25-355 (356)
216 PRK06767 methionine gamma-lyas 99.9 2.5E-22 5.3E-27 203.1 25.7 287 154-476 61-384 (386)
217 PLN02409 serine--glyoxylate am 99.9 4.6E-21 9.9E-26 195.1 33.9 297 153-478 41-373 (401)
218 PRK05664 threonine-phosphate d 99.9 3.2E-21 6.8E-26 191.4 30.8 302 109-477 20-328 (330)
219 PRK14012 cysteine desulfurase; 99.9 3.1E-21 6.8E-26 196.9 31.6 334 110-478 5-380 (404)
220 PLN02672 methionine S-methyltr 99.9 4.4E-21 9.6E-26 209.3 34.4 344 107-476 695-1079(1082)
221 PRK08056 threonine-phosphate d 99.9 4.4E-21 9.4E-26 192.5 31.7 324 106-475 17-353 (356)
222 COG1168 MalY Bifunctional PLP- 99.9 7.6E-21 1.6E-25 180.9 31.3 326 122-477 37-386 (388)
223 TIGR01324 cysta_beta_ly_B cyst 99.9 1.3E-21 2.7E-26 196.4 27.2 287 154-476 50-375 (377)
224 PLN02242 methionine gamma-lyas 99.9 1.8E-21 3.9E-26 197.8 28.4 217 153-393 75-302 (418)
225 PRK14809 histidinol-phosphate 99.9 7.7E-21 1.7E-25 190.9 32.1 317 107-476 28-356 (357)
226 PRK13479 2-aminoethylphosphona 99.9 1.4E-20 2.9E-25 190.0 34.0 294 154-478 37-364 (368)
227 PRK09105 putative aminotransfe 99.9 7.8E-21 1.7E-25 191.4 31.8 316 109-475 43-368 (370)
228 PRK07392 threonine-phosphate d 99.9 1.6E-20 3.4E-25 188.8 33.6 323 109-475 22-357 (360)
229 cd06450 DOPA_deC_like DOPA dec 99.9 5.1E-21 1.1E-25 191.3 30.0 280 152-473 36-344 (345)
230 PRK05166 histidinol-phosphate 99.9 1.5E-20 3.3E-25 189.7 32.9 321 108-475 35-369 (371)
231 PLN02376 1-aminocyclopropane-1 99.9 4.9E-21 1.1E-25 198.8 29.7 307 157-477 97-438 (496)
232 TIGR01140 L_thr_O3P_dcar L-thr 99.9 7.8E-21 1.7E-25 188.6 29.5 304 109-471 17-329 (330)
233 PRK08133 O-succinylhomoserine 99.9 4E-21 8.7E-26 194.3 27.7 213 153-390 60-280 (390)
234 PRK05839 hypothetical protein; 99.9 1.4E-20 3E-25 190.1 31.5 330 108-476 23-373 (374)
235 PLN02651 cysteine desulfurase 99.9 4.5E-21 9.8E-26 193.0 27.7 311 124-465 11-364 (364)
236 PRK06358 threonine-phosphate d 99.9 2.9E-20 6.2E-25 186.3 33.0 321 108-475 18-353 (354)
237 PLN02450 1-aminocyclopropane-1 99.9 1.3E-20 2.9E-25 194.8 31.3 308 157-479 89-432 (468)
238 PRK05968 hypothetical protein; 99.9 3.3E-21 7.1E-26 194.8 25.9 285 154-472 63-385 (389)
239 cd00617 Tnase_like Tryptophana 99.9 2.7E-20 5.8E-25 188.6 32.4 332 126-477 32-408 (431)
240 COG2008 GLY1 Threonine aldolas 99.9 2.9E-21 6.3E-26 183.5 23.6 324 112-475 2-341 (342)
241 PRK06836 aspartate aminotransf 99.9 1E-19 2.2E-24 185.1 36.5 328 108-477 32-391 (394)
242 PRK06959 putative threonine-ph 99.9 2E-20 4.3E-25 186.1 30.4 302 109-479 24-335 (339)
243 PRK02610 histidinol-phosphate 99.9 3.5E-20 7.6E-25 187.2 32.3 323 109-478 28-372 (374)
244 PRK07590 L,L-diaminopimelate a 99.9 2.5E-20 5.4E-25 190.5 31.3 337 108-474 33-408 (409)
245 PRK06425 histidinol-phosphate 99.9 2E-20 4.3E-25 185.9 29.7 283 155-475 41-331 (332)
246 PRK08249 cystathionine gamma-s 99.9 1.1E-20 2.4E-25 191.2 27.9 213 153-390 63-283 (398)
247 PRK06460 hypothetical protein; 99.9 9.6E-21 2.1E-25 190.6 27.1 212 154-390 45-264 (376)
248 PLN02607 1-aminocyclopropane-1 99.9 3.1E-20 6.7E-25 190.7 31.1 351 110-478 48-438 (447)
249 PLN02231 alanine transaminase 99.9 7.7E-20 1.7E-24 191.0 34.6 342 126-482 143-532 (534)
250 PRK01688 histidinol-phosphate 99.9 1.4E-20 3E-25 188.4 27.6 306 110-472 29-351 (351)
251 PRK14808 histidinol-phosphate 99.9 2.5E-20 5.5E-25 185.1 29.1 310 106-474 16-334 (335)
252 TIGR03542 DAPAT_plant LL-diami 99.9 3E-20 6.5E-25 189.5 29.8 337 108-474 32-401 (402)
253 PRK08574 cystathionine gamma-s 99.9 6.5E-21 1.4E-25 192.1 24.5 212 154-390 53-272 (385)
254 COG0399 WecE Predicted pyridox 99.9 5.1E-20 1.1E-24 180.5 29.8 310 126-476 15-372 (374)
255 TIGR03588 PseC UDP-4-keto-6-de 99.9 9.6E-20 2.1E-24 184.4 32.7 316 126-475 10-380 (380)
256 PRK07503 methionine gamma-lyas 99.9 2.4E-20 5.3E-25 189.2 28.1 214 154-390 65-286 (403)
257 PTZ00376 aspartate aminotransf 99.9 1.7E-20 3.7E-25 191.4 26.4 329 109-476 29-402 (404)
258 TIGR01325 O_suc_HS_sulf O-succ 99.9 1.8E-20 4E-25 189.0 25.6 212 154-390 54-273 (380)
259 PRK07504 O-succinylhomoserine 99.9 1.9E-20 4E-25 189.8 24.8 212 154-390 65-285 (398)
260 TIGR03235 DNA_S_dndA cysteine 99.9 2.5E-20 5.5E-25 186.9 25.5 286 124-441 10-325 (353)
261 PRK07810 O-succinylhomoserine 99.9 4.6E-20 1E-24 186.9 27.4 213 154-391 70-291 (403)
262 PRK07908 hypothetical protein; 99.9 1.5E-19 3.3E-24 180.9 30.8 316 108-476 21-346 (349)
263 PF01041 DegT_DnrJ_EryC1: DegT 99.9 2.4E-19 5.1E-24 180.2 31.6 308 126-472 5-363 (363)
264 PRK04781 histidinol-phosphate 99.9 2E-19 4.3E-24 180.9 30.9 285 156-475 61-361 (364)
265 PRK04635 histidinol-phosphate 99.9 1.5E-19 3.2E-24 181.3 29.8 307 108-473 30-351 (354)
266 KOG1368 Threonine aldolase [Am 99.9 3E-20 6.5E-25 170.0 22.3 329 110-474 22-365 (384)
267 PLN02509 cystathionine beta-ly 99.9 6E-20 1.3E-24 187.5 26.9 211 154-390 133-352 (464)
268 KOG1405 4-aminobutyrate aminot 99.9 8.2E-21 1.8E-25 177.3 18.7 346 96-477 62-483 (484)
269 PRK03967 histidinol-phosphate 99.9 4.5E-19 9.6E-24 176.5 32.0 306 108-476 17-333 (337)
270 COG0112 GlyA Glycine/serine hy 99.9 2.2E-19 4.7E-24 171.6 27.9 338 110-477 27-390 (413)
271 PRK02769 histidine decarboxyla 99.9 3.4E-19 7.5E-24 178.6 30.7 287 152-477 63-372 (380)
272 PLN02397 aspartate transaminas 99.9 1E-19 2.3E-24 186.3 26.4 328 109-476 48-420 (423)
273 PRK08354 putative aminotransfe 99.9 1.2E-18 2.6E-23 171.5 32.8 295 109-474 8-309 (311)
274 PLN02880 tyrosine decarboxylas 99.9 2.9E-19 6.2E-24 184.8 29.5 315 152-481 120-488 (490)
275 PRK07811 cystathionine gamma-s 99.9 2E-19 4.3E-24 181.8 27.5 213 154-391 61-282 (388)
276 TIGR01788 Glu-decarb-GAD gluta 99.9 4.2E-19 9.1E-24 180.3 29.5 331 124-478 53-430 (431)
277 PRK08114 cystathionine beta-ly 99.9 2E-19 4.4E-24 180.0 26.4 212 154-390 62-283 (395)
278 PRK11658 UDP-4-amino-4-deoxy-L 99.9 1.3E-18 2.8E-23 175.7 32.3 312 126-475 14-377 (379)
279 PRK04366 glycine dehydrogenase 99.9 4.3E-19 9.3E-24 184.1 29.4 329 124-481 82-452 (481)
280 PLN02590 probable tyrosine dec 99.9 1.8E-18 3.8E-23 179.1 33.5 313 153-480 169-535 (539)
281 COG1103 Archaea-specific pyrid 99.9 2.5E-19 5.4E-24 161.9 23.0 316 128-477 29-380 (382)
282 PRK08247 cystathionine gamma-s 99.9 3.8E-19 8.3E-24 178.6 27.2 227 154-406 52-288 (366)
283 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 1.5E-18 3.2E-23 175.2 30.8 309 126-475 11-374 (375)
284 PRK09257 aromatic amino acid a 99.8 3.8E-19 8.2E-24 181.1 26.3 321 110-474 27-395 (396)
285 PLN03032 serine decarboxylase; 99.8 1.4E-18 3.1E-23 172.8 29.6 309 126-473 37-372 (374)
286 PLN02271 serine hydroxymethylt 99.8 1.1E-18 2.5E-23 176.9 29.0 336 109-476 148-539 (586)
287 PRK08776 cystathionine gamma-s 99.8 1E-18 2.2E-23 177.0 28.9 212 154-390 60-280 (405)
288 KOG0259 Tyrosine aminotransfer 99.8 5E-18 1.1E-22 160.6 30.9 334 109-479 61-435 (447)
289 PRK07050 cystathionine beta-ly 99.8 5.6E-19 1.2E-23 178.6 26.1 291 154-479 65-393 (394)
290 PRK06084 O-acetylhomoserine am 99.8 4.3E-19 9.3E-24 180.8 25.4 214 154-390 58-311 (425)
291 TIGR01329 cysta_beta_ly_E cyst 99.8 7E-19 1.5E-23 177.2 26.5 285 154-477 47-375 (378)
292 TIGR02379 ECA_wecE TDP-4-keto- 99.8 3.1E-18 6.8E-23 172.2 31.0 309 126-475 11-375 (376)
293 PRK07049 methionine gamma-lyas 99.8 9.4E-19 2E-23 178.6 27.3 217 154-390 83-314 (427)
294 PRK09028 cystathionine beta-ly 99.8 1.4E-18 3E-23 174.6 27.5 212 154-390 61-280 (394)
295 PRK05994 O-acetylhomoserine am 99.8 9.5E-19 2.1E-23 178.7 26.2 214 154-390 63-315 (427)
296 PRK07812 O-acetylhomoserine am 99.8 1.4E-18 3.1E-23 176.9 27.3 214 153-390 68-320 (436)
297 PRK08861 cystathionine gamma-s 99.8 2E-18 4.3E-23 173.6 27.9 212 154-390 53-273 (388)
298 TIGR03799 NOD_PanD_pyr putativ 99.8 8.8E-18 1.9E-22 174.1 33.1 350 112-470 85-518 (522)
299 COG0075 Serine-pyruvate aminot 99.8 1.2E-17 2.6E-22 163.7 32.0 294 154-478 38-364 (383)
300 TIGR02080 O_succ_thio_ly O-suc 99.8 1.9E-18 4.1E-23 174.1 27.3 212 154-390 51-271 (382)
301 PRK00451 glycine dehydrogenase 99.8 2.3E-18 5E-23 178.1 28.6 292 149-475 107-446 (447)
302 PRK15407 lipopolysaccharide bi 99.8 1.2E-17 2.6E-22 170.8 33.4 292 154-476 63-435 (438)
303 PRK05939 hypothetical protein; 99.8 9.6E-19 2.1E-23 176.8 24.9 213 154-390 47-287 (397)
304 PRK08637 hypothetical protein; 99.8 1.6E-17 3.5E-22 168.6 31.9 279 173-478 73-387 (388)
305 PRK08045 cystathionine gamma-s 99.8 6E-18 1.3E-22 170.5 28.3 212 154-390 52-272 (386)
306 PLN02724 Molybdenum cofactor s 99.8 1.1E-17 2.4E-22 183.5 32.0 348 109-475 35-486 (805)
307 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 2.9E-18 6.2E-23 175.1 25.6 149 154-322 57-209 (418)
308 PRK09275 aspartate aminotransf 99.8 5E-18 1.1E-22 175.3 27.0 341 109-480 100-520 (527)
309 PRK08064 cystathionine beta-ly 99.8 7.6E-18 1.6E-22 170.4 27.8 283 154-474 54-383 (390)
310 PRK06702 O-acetylhomoserine am 99.8 3.4E-18 7.3E-23 173.2 25.0 213 154-390 61-313 (432)
311 PRK08134 O-acetylhomoserine am 99.8 4.8E-18 1E-22 173.3 26.1 213 154-390 64-316 (433)
312 PRK08248 O-acetylhomoserine am 99.8 3.6E-18 7.8E-23 174.2 25.1 214 154-390 64-316 (431)
313 PRK07671 cystathionine beta-ly 99.8 6E-18 1.3E-22 170.3 25.8 211 154-390 50-269 (377)
314 PRK07269 cystathionine gamma-s 99.8 4.6E-18 9.9E-23 170.1 24.3 227 154-406 54-288 (364)
315 PRK09440 avtA valine--pyruvate 99.8 3.1E-17 6.8E-22 168.2 31.0 338 110-480 31-414 (416)
316 PLN02414 glycine dehydrogenase 99.8 8.8E-18 1.9E-22 183.3 27.6 306 151-479 565-909 (993)
317 PRK05613 O-acetylhomoserine am 99.8 6.2E-18 1.3E-22 172.3 24.4 213 154-390 69-325 (437)
318 PLN02368 alanine transaminase 99.8 7.8E-18 1.7E-22 170.8 24.9 242 157-405 110-395 (407)
319 PRK07582 cystathionine gamma-l 99.8 1.6E-17 3.5E-22 166.6 26.5 278 154-472 51-364 (366)
320 PF00464 SHMT: Serine hydroxym 99.8 1.4E-17 3.1E-22 164.9 25.5 330 110-471 21-399 (399)
321 PRK05967 cystathionine beta-ly 99.8 2E-17 4.3E-22 165.9 26.8 213 153-390 63-283 (395)
322 TIGR03801 asp_4_decarbox aspar 99.8 2.5E-17 5.5E-22 169.8 28.2 338 110-480 95-519 (521)
323 cd00615 Orn_deC_like Ornithine 99.8 1.9E-18 4.1E-23 168.6 18.8 219 153-385 58-293 (294)
324 PLN02263 serine decarboxylase 99.8 6.6E-17 1.4E-21 163.3 30.4 305 136-478 110-444 (470)
325 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 2.1E-17 4.5E-22 165.3 26.1 230 153-407 54-311 (386)
326 PRK06176 cystathionine gamma-s 99.8 2E-17 4.2E-22 166.6 26.1 210 154-389 50-268 (380)
327 TIGR00474 selA seryl-tRNA(sec) 99.8 5.3E-17 1.2E-21 165.5 29.0 198 125-337 94-310 (454)
328 KOG1549 Cysteine desulfurase N 99.8 3.4E-17 7.4E-22 159.8 24.8 338 110-479 45-420 (428)
329 KOG0634 Aromatic amino acid am 99.8 3.7E-16 8E-21 150.5 29.3 308 171-481 126-470 (472)
330 PRK03080 phosphoserine aminotr 99.8 6.3E-17 1.4E-21 163.4 25.2 288 153-478 47-374 (378)
331 PRK04311 selenocysteine syntha 99.8 4.1E-16 8.8E-21 159.5 31.1 317 124-476 98-463 (464)
332 TIGR02618 tyr_phenol_ly tyrosi 99.8 1.5E-16 3.3E-21 158.8 27.0 311 153-477 70-426 (450)
333 KOG0256 1-aminocyclopropane-1- 99.8 2E-16 4.4E-21 151.1 25.9 332 107-477 106-461 (471)
334 PRK15029 arginine decarboxylas 99.8 1.9E-16 4.1E-21 168.6 28.0 230 154-389 205-466 (755)
335 cd00611 PSAT_like Phosphoserin 99.8 1E-16 2.2E-21 160.6 23.8 306 124-474 10-353 (355)
336 COG0626 MetC Cystathionine bet 99.8 3.7E-16 8E-21 154.4 26.5 232 153-407 62-319 (396)
337 TIGR01364 serC_1 phosphoserine 99.7 8.9E-16 1.9E-20 152.8 27.7 310 125-477 4-348 (349)
338 PRK13237 tyrosine phenol-lyase 99.7 7.7E-16 1.7E-20 154.2 27.1 310 153-477 77-433 (460)
339 PRK06434 cystathionine gamma-l 99.7 2.9E-16 6.2E-21 157.4 24.2 225 154-406 64-308 (384)
340 PRK12566 glycine dehydrogenase 99.7 9.4E-16 2E-20 164.5 27.9 303 149-478 538-877 (954)
341 TIGR03531 selenium_SpcS O-phos 99.7 9.5E-16 2.1E-20 155.2 26.3 302 153-474 104-443 (444)
342 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 3.8E-17 8.2E-22 162.6 15.8 232 153-393 65-326 (417)
343 PRK05355 3-phosphoserine/phosp 99.7 1.6E-15 3.4E-20 151.8 26.7 310 124-477 14-358 (360)
344 PRK05367 glycine dehydrogenase 99.7 1.6E-15 3.5E-20 166.5 26.2 304 150-480 538-878 (954)
345 TIGR00461 gcvP glycine dehydro 99.7 4.3E-15 9.3E-20 160.5 27.3 303 149-479 525-869 (939)
346 PRK15400 lysine decarboxylase 99.7 1.2E-14 2.6E-19 153.3 26.8 304 153-475 194-557 (714)
347 TIGR01366 serC_3 phosphoserine 99.7 5.4E-15 1.2E-19 148.2 22.6 285 154-477 41-360 (361)
348 COG2873 MET17 O-acetylhomoseri 99.7 1.9E-14 4.1E-19 136.5 24.6 213 154-389 62-313 (426)
349 PRK13578 ornithine decarboxyla 99.7 1.5E-14 3.1E-19 152.8 26.4 311 153-476 173-564 (720)
350 PF00282 Pyridoxal_deC: Pyrido 99.7 1.6E-14 3.4E-19 144.7 25.5 244 154-406 79-373 (373)
351 cd01494 AAT_I Aspartate aminot 99.7 1.1E-15 2.3E-20 136.1 14.5 160 156-327 2-169 (170)
352 PF01212 Beta_elim_lyase: Beta 99.7 4.7E-16 1E-20 149.8 12.6 258 113-395 1-277 (290)
353 PRK15399 lysine decarboxylase 99.7 3.4E-14 7.4E-19 149.8 27.4 303 153-475 194-557 (713)
354 COG0076 GadB Glutamate decarbo 99.7 2E-14 4.4E-19 146.6 24.9 269 125-407 75-381 (460)
355 KOG0053 Cystathionine beta-lya 99.7 2.6E-14 5.6E-19 139.5 24.4 210 154-388 77-295 (409)
356 KOG2862 Alanine-glyoxylate ami 99.6 1.4E-13 3.1E-18 127.3 25.2 291 155-477 51-382 (385)
357 TIGR02617 tnaA_trp_ase tryptop 99.6 2.1E-13 4.6E-18 135.1 28.0 345 110-477 42-441 (467)
358 TIGR03811 tyr_de_CO2_Ent tyros 99.6 4.2E-13 9E-18 140.6 31.8 363 112-481 78-606 (608)
359 PLN02414 glycine dehydrogenase 99.6 9.8E-13 2.1E-17 144.2 26.7 318 110-473 103-465 (993)
360 KOG0633 Histidinol phosphate a 99.5 1.4E-12 3.1E-17 117.8 21.5 286 158-474 73-374 (375)
361 PLN02452 phosphoserine transam 99.5 6.3E-12 1.4E-16 125.4 28.5 321 110-477 7-363 (365)
362 COG1982 LdcC Arginine/lysine/o 99.5 2.3E-12 4.9E-17 131.0 23.5 224 154-395 70-320 (557)
363 PRK05367 glycine dehydrogenase 99.5 1.5E-11 3.3E-16 135.5 28.4 278 149-472 116-437 (954)
364 COG3977 Alanine-alpha-ketoisov 99.5 1.8E-10 3.9E-15 106.4 30.2 340 111-481 32-415 (417)
365 TIGR01365 serC_2 phosphoserine 99.5 2.3E-11 4.9E-16 121.5 25.3 287 154-476 39-372 (374)
366 COG1003 GcvP Glycine cleavage 99.4 1E-10 2.2E-15 113.4 23.6 302 151-479 106-449 (496)
367 KOG2467 Glycine/serine hydroxy 99.4 3.8E-10 8.3E-15 106.9 26.5 334 111-477 42-426 (477)
368 PRK12462 phosphoserine aminotr 99.4 3.5E-10 7.6E-15 111.8 27.2 309 125-477 16-362 (364)
369 KOG1383 Glutamate decarboxylas 99.4 3E-10 6.5E-15 111.2 25.6 341 107-481 77-450 (491)
370 COG3844 Kynureninase [Amino ac 99.3 1.6E-09 3.5E-14 101.4 24.9 286 153-478 75-403 (407)
371 COG1921 SelA Selenocysteine sy 99.3 2.9E-10 6.3E-15 110.9 18.9 238 110-365 21-271 (395)
372 TIGR00461 gcvP glycine dehydro 99.2 3E-09 6.6E-14 115.7 25.6 313 111-472 65-426 (939)
373 KOG0629 Glutamate decarboxylas 99.2 4.1E-09 8.9E-14 102.0 21.9 306 157-475 144-507 (510)
374 PF03841 SelA: L-seryl-tRNA se 99.2 2.8E-11 6.1E-16 117.0 6.6 222 125-364 19-260 (367)
375 PF02347 GDC-P: Glycine cleava 99.2 4.8E-09 1.1E-13 104.9 22.6 279 148-471 104-429 (429)
376 COG1448 TyrB Aspartate/tyrosin 99.1 1.9E-08 4.1E-13 96.9 22.1 276 156-474 71-395 (396)
377 PF06838 Met_gamma_lyase: Meth 99.1 3.8E-08 8.2E-13 94.4 23.2 245 150-429 49-332 (403)
378 PF05889 SLA_LP_auto_ag: Solub 99.1 2.6E-08 5.7E-13 97.4 22.3 300 158-476 60-389 (389)
379 COG0403 GcvP Glycine cleavage 99.1 4.9E-08 1.1E-12 95.2 23.6 320 109-474 74-447 (450)
380 PF12897 Aminotran_MocR: Alani 99.0 8.1E-08 1.8E-12 92.8 22.4 298 151-477 66-415 (425)
381 KOG0628 Aromatic-L-amino-acid/ 99.0 4.6E-07 1E-11 89.0 27.7 302 153-480 108-474 (511)
382 KOG0258 Alanine aminotransfera 99.0 2.8E-07 6.1E-12 88.6 25.4 333 126-481 89-473 (475)
383 KOG2040 Glycine dehydrogenase 98.9 2.7E-07 5.9E-12 93.6 22.3 303 151-478 579-919 (1001)
384 COG3033 TnaA Tryptophanase [Am 98.8 2.6E-06 5.6E-11 81.3 24.9 347 108-477 45-444 (471)
385 PRK12566 glycine dehydrogenase 98.8 1.7E-06 3.8E-11 94.1 24.3 309 111-472 80-439 (954)
386 COG4100 Cystathionine beta-lya 98.6 4.4E-06 9.5E-11 77.8 18.4 244 149-425 59-340 (416)
387 COG1932 SerC Phosphoserine ami 98.5 5.8E-05 1.3E-09 72.9 22.4 321 111-477 6-363 (365)
388 KOG3846 L-kynurenine hydrolase 98.3 0.00015 3.2E-09 68.0 21.0 329 107-478 64-462 (465)
389 KOG1412 Aspartate aminotransfe 98.0 0.0011 2.4E-08 62.5 20.2 274 173-480 103-408 (410)
390 KOG3843 Predicted serine hydro 97.4 0.0081 1.8E-07 55.5 15.4 161 155-326 58-236 (432)
391 KOG2040 Glycine dehydrogenase 97.3 0.056 1.2E-06 56.1 20.8 270 157-472 166-478 (1001)
392 PF04864 Alliinase_C: Allinase 97.2 0.027 5.8E-07 54.5 17.3 271 155-474 44-362 (363)
393 KOG2790 Phosphoserine aminotra 97.2 0.038 8.3E-07 51.8 17.1 318 109-477 6-368 (370)
394 KOG1411 Aspartate aminotransfe 97.1 0.0075 1.6E-07 57.9 11.8 262 176-475 127-423 (427)
395 PLN02994 1-aminocyclopropane-1 95.4 0.075 1.6E-06 46.2 7.9 55 150-204 92-152 (153)
396 PRK13397 3-deoxy-7-phosphohept 86.4 16 0.00035 34.4 12.4 59 224-287 134-196 (250)
397 PRK13396 3-deoxy-7-phosphohept 85.4 15 0.00032 36.5 12.2 81 201-287 195-283 (352)
398 PRK12595 bifunctional 3-deoxy- 81.4 25 0.00054 35.3 12.2 83 200-287 211-299 (360)
399 TIGR01361 DAHP_synth_Bsub phos 75.9 48 0.0011 31.5 11.9 81 202-287 120-206 (260)
400 smart00642 Aamy Alpha-amylase 70.5 10 0.00022 33.5 5.4 25 260-284 68-92 (166)
401 COG1066 Sms Predicted ATP-depe 53.1 1.3E+02 0.0029 30.5 10.1 57 215-280 147-215 (456)
402 PLN02672 methionine S-methyltr 51.2 62 0.0013 37.4 8.5 119 156-284 428-566 (1082)
403 PRK10906 DNA-binding transcrip 50.4 2.2E+02 0.0049 26.8 11.7 119 154-283 76-209 (252)
404 PRK08673 3-deoxy-7-phosphohept 46.0 2.9E+02 0.0063 27.4 11.3 80 202-287 188-274 (335)
405 PRK13398 3-deoxy-7-phosphohept 45.6 1.7E+02 0.0037 27.9 9.4 79 203-287 123-208 (266)
406 KOG2862 Alanine-glyoxylate ami 43.5 2.9E+02 0.0062 27.1 10.3 142 111-261 32-188 (385)
407 PRK03892 ribonuclease P protei 40.8 2.2E+02 0.0048 26.0 8.6 41 264-319 155-195 (216)
408 PF06506 PrpR_N: Propionate ca 39.8 2.6E+02 0.0057 24.6 9.8 106 160-283 45-151 (176)
409 COG0108 RibB 3,4-dihydroxy-2-b 39.5 45 0.00097 30.1 4.1 35 245-280 156-190 (203)
410 PF01008 IF-2B: Initiation fac 38.7 3.6E+02 0.0077 25.7 11.5 115 160-285 98-221 (282)
411 PF07905 PucR: Purine cataboli 37.0 1.3E+02 0.0028 24.8 6.4 50 221-280 54-104 (123)
412 PRK09802 DNA-binding transcrip 36.0 3.9E+02 0.0085 25.4 11.1 119 154-283 91-224 (269)
413 COG1349 GlpR Transcriptional r 35.5 3.9E+02 0.0084 25.2 12.1 119 155-283 77-209 (253)
414 TIGR03586 PseI pseudaminic aci 35.4 4.5E+02 0.0098 26.0 11.2 57 224-287 145-204 (327)
415 PF05368 NmrA: NmrA-like famil 34.1 2.1E+02 0.0045 26.2 8.1 76 194-280 24-99 (233)
416 PF04392 ABC_sub_bind: ABC tra 33.9 2.7E+02 0.0058 26.7 9.1 148 126-280 14-165 (294)
417 PRK08535 translation initiatio 33.0 4.8E+02 0.01 25.5 12.0 140 126-286 86-234 (310)
418 PF08423 Rad51: Rad51; InterP 32.4 2.3E+02 0.005 26.8 8.1 63 216-280 106-183 (256)
419 PRK09505 malS alpha-amylase; R 31.8 79 0.0017 34.7 5.3 21 264-284 294-314 (683)
420 KOG1465 Translation initiation 31.5 5E+02 0.011 25.3 11.8 112 158-281 151-270 (353)
421 COG0552 FtsY Signal recognitio 31.5 5.3E+02 0.011 25.6 13.6 134 180-327 154-305 (340)
422 PF00128 Alpha-amylase: Alpha 30.9 28 0.00061 33.4 1.7 24 262-285 52-75 (316)
423 COG0296 GlgB 1,4-alpha-glucan 30.8 51 0.0011 35.5 3.6 38 258-297 210-247 (628)
424 TIGR00511 ribulose_e2b2 ribose 30.5 5.2E+02 0.011 25.2 12.0 117 158-286 104-229 (301)
425 PRK10785 maltodextrin glucosid 30.2 1.3E+02 0.0027 32.6 6.6 56 223-284 176-248 (598)
426 PF12818 Tegument_dsDNA: dsDNA 29.7 5.2E+02 0.011 24.9 12.0 116 155-280 149-272 (282)
427 COG1105 FruK Fructose-1-phosph 29.1 1.2E+02 0.0026 29.7 5.5 21 264-284 148-168 (310)
428 PF00455 DeoRC: DeoR C termina 29.0 3.8E+02 0.0083 23.2 10.9 118 154-284 4-138 (161)
429 COG1737 RpiR Transcriptional r 28.2 4E+02 0.0088 25.5 9.2 24 257-280 186-209 (281)
430 PRK02289 4-oxalocrotonate taut 27.9 1.7E+02 0.0037 20.5 4.9 31 451-481 4-34 (60)
431 PF00926 DHBP_synthase: 3,4-di 27.8 94 0.002 28.1 4.3 35 245-280 152-186 (194)
432 PRK09458 pspB phage shock prot 27.6 1.7E+02 0.0036 22.0 4.7 31 43-73 14-45 (75)
433 COG2870 RfaE ADP-heptose synth 27.6 1.2E+02 0.0026 30.7 5.2 33 248-282 146-178 (467)
434 PRK09441 cytoplasmic alpha-amy 27.5 44 0.00094 35.0 2.5 26 259-284 78-103 (479)
435 PF01972 SDH_sah: Serine dehyd 27.3 88 0.0019 29.9 4.1 36 254-289 97-135 (285)
436 TIGR02456 treS_nterm trehalose 27.2 1.5E+02 0.0032 31.6 6.5 57 223-285 25-99 (539)
437 TIGR01389 recQ ATP-dependent D 27.1 7.7E+02 0.017 26.5 12.0 114 165-290 24-143 (591)
438 TIGR00762 DegV EDD domain prot 27.0 4.5E+02 0.0098 25.0 9.3 11 104-114 28-38 (275)
439 TIGR02100 glgX_debranch glycog 26.8 41 0.0009 36.9 2.2 41 245-285 228-268 (688)
440 PF10678 DUF2492: Protein of u 26.3 1.1E+02 0.0024 23.2 3.7 47 156-202 22-69 (78)
441 TIGR00506 ribB 3,4-dihydroxy-2 25.9 1.1E+02 0.0024 27.7 4.4 33 246-279 158-190 (199)
442 PF10087 DUF2325: Uncharacteri 25.5 3E+02 0.0065 21.4 6.5 65 204-282 13-82 (97)
443 TIGR02403 trehalose_treC alpha 25.4 1.8E+02 0.0038 31.1 6.6 22 263-284 76-97 (543)
444 COG1911 RPL30 Ribosomal protei 25.0 85 0.0018 24.7 3.0 87 182-283 7-93 (100)
445 COG4273 Uncharacterized conser 25.0 1.8E+02 0.0038 24.2 4.9 54 421-480 79-132 (135)
446 PF02603 Hpr_kinase_N: HPr Ser 24.6 92 0.002 25.9 3.4 31 245-282 82-112 (127)
447 COG0352 ThiE Thiamine monophos 24.1 62 0.0013 29.7 2.5 20 264-283 54-73 (211)
448 PF03796 DnaB_C: DnaB-like hel 23.9 3E+02 0.0065 25.8 7.3 54 224-281 113-176 (259)
449 COG0761 lytB 4-Hydroxy-3-methy 23.3 5.8E+02 0.013 24.6 8.7 79 144-233 7-86 (294)
450 KOG0742 AAA+-type ATPase [Post 23.2 58 0.0013 33.0 2.2 31 257-287 416-456 (630)
451 PF14871 GHL6: Hypothetical gl 22.9 3.4E+02 0.0074 22.8 6.6 17 264-280 46-62 (132)
452 PRK00910 ribB 3,4-dihydroxy-2- 22.5 1.4E+02 0.0031 27.5 4.5 34 246-280 169-202 (218)
453 PRK13509 transcriptional repre 22.5 6.5E+02 0.014 23.6 9.6 116 154-283 78-208 (251)
454 TIGR03853 matur_matur probable 22.4 1.4E+02 0.0031 22.5 3.6 47 156-202 20-67 (77)
455 PF13872 AAA_34: P-loop contai 22.4 59 0.0013 31.5 2.1 23 264-286 161-184 (303)
456 PF06667 PspB: Phage shock pro 21.8 1.5E+02 0.0033 22.3 3.7 30 45-74 16-46 (75)
457 PRK00745 4-oxalocrotonate taut 21.4 2.4E+02 0.0051 19.6 4.7 30 451-480 4-33 (62)
458 COG1307 DegV Uncharacterized p 21.3 7.4E+02 0.016 23.8 9.6 48 155-202 65-119 (282)
459 KOG3974 Predicted sugar kinase 21.3 1.3E+02 0.0028 28.5 3.9 49 223-282 90-139 (306)
460 COG1088 RfbB dTDP-D-glucose 4, 21.1 7.9E+02 0.017 24.1 10.7 125 173-305 3-149 (340)
461 cd01455 vWA_F11C1-5a_type Von 20.8 3.6E+02 0.0077 24.4 6.6 35 245-280 113-147 (191)
462 PRK00014 ribB 3,4-dihydroxy-2- 20.7 1.6E+02 0.0035 27.3 4.4 34 246-280 173-206 (230)
463 PRK10933 trehalose-6-phosphate 20.6 2.5E+02 0.0054 30.0 6.6 23 263-285 82-104 (551)
464 PRK11557 putative DNA-binding 20.5 7E+02 0.015 23.5 9.3 25 256-280 183-207 (278)
465 COG2256 MGS1 ATPase related to 20.5 1.9E+02 0.004 29.4 5.1 52 225-287 61-117 (436)
466 PRK10681 DNA-binding transcrip 20.3 7.2E+02 0.016 23.3 10.6 117 154-283 77-210 (252)
467 PF04989 CmcI: Cephalosporin h 20.2 72 0.0016 29.1 2.1 101 175-281 42-147 (206)
468 PRK01792 ribB 3,4-dihydroxy-2- 20.1 1.7E+02 0.0037 26.9 4.4 34 246-280 168-201 (214)
No 1
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-92 Score=663.01 Aligned_cols=443 Identities=54% Similarity=0.914 Sum_probs=420.9
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHhhcCCCCCCccccccc-ccCCCccccCCCCeEEECCeeEEEe
Q 011567 36 GHLFVEVLLLVVILFLLSQKSYKPPKRPLTKKEIDELCDEWVPESLIPPIIEEM-RCEPPVLESAAGPHTIISGKEVVNF 114 (483)
Q Consensus 36 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~l~~~~~~~~~~~~~~~~~-~~~~~~i~~~~g~~~~~~G~~~id~ 114 (483)
+|+++|++|+++++|++++|+|+.+..+||++|+|+|+++|+|+||+|++++++ ...++++++..++++++||++|+||
T Consensus 20 ~~~~iE~lLi~~~i~~~~rk~~~~~~~~lt~~eideLiedw~PEPLV~~~~~~~~~~~~~v~e~~~~~~~~i~G~~~~N~ 99 (467)
T KOG1358|consen 20 LHTIIETLLIVLVIILLLRKSYKIPVRPLTEQEIDELIEDWEPEPLVPPVPEDHPVLNTPVLESVMLPHVTIDGKDVLNF 99 (467)
T ss_pred HHHHHHHHHHHHhhheeeeccCCCcccCCCHHHHHHHHhcCCCCCCCCCCcccccccCCcccccccCCceEecCceeecc
Confidence 799999999999999999999999888999999999999999999999999765 4678899999999999999999999
Q ss_pred ecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCc
Q 011567 115 ASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGD 194 (483)
Q Consensus 115 ~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gd 194 (483)
+|+||||+..++++++.+...+++||+|+||||+||||.|+|.++|++||+|+|+|++++|+.|++|+.+++++|+++||
T Consensus 100 aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E~aivYs~gF~ti~S~ipafsKrGD 179 (467)
T KOG1358|consen 100 ASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTEDAIVYSYGFSTIESAIPAFSKRGD 179 (467)
T ss_pred cchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCcceeeeccccchhhhcchhhhccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhcc---CccEEEEEecccCCCCCccChHHHHHHH
Q 011567 195 LIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAK---KLRRYIVVEAVYQNSGQIAPLDELIRLK 271 (483)
Q Consensus 195 iI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~---~~~~~iv~e~v~~~~G~i~~L~~l~~l~ 271 (483)
+|++|+.+++++++|++++++++.+|+||||++||+++.+...++.|.+ .++++|++|++|.|+|+++||++|++++
T Consensus 180 Ii~~de~~nfaIq~GlqlSRS~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk 259 (467)
T KOG1358|consen 180 IIFVDEAVNFAIQKGLQLSRSTISYFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLK 259 (467)
T ss_pred EEEEehhhhHHHHHHHhhhhheeEEecCCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHH
Confidence 9999999999999999999999999999999999999987765554433 4599999999999999999999999999
Q ss_pred HHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCCceeeccHHHHHHHHhcCCceeecCCCcHH
Q 011567 272 EKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSASLPPY 351 (483)
Q Consensus 272 ~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~ 351 (483)
.||++++|+||++++|++|++|||+++|+|+++.++|++++||..++++.||||+|+..+++|+|.++.+|+||+++||+
T Consensus 260 ~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~GgFc~G~~~i~~hQrLSg~~Y~fSAslPp~ 339 (467)
T KOG1358|consen 260 NKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGGGFCAGKSFIADHQRLSGSGYCFSASLPPY 339 (467)
T ss_pred hhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccCceeecceeeEeeeeccccceeeeccCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCC
Q 011567 352 LASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDG 431 (483)
Q Consensus 352 ~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~G 431 (483)
.+.+|..++++++.++++.+.+++....++..|+...++.+.+++.||++++.+..+.++.+.+...++++++.|+.+ |
T Consensus 340 la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~ 418 (467)
T KOG1358|consen 340 LAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-G 418 (467)
T ss_pred hhhhHHHHHHHHhhCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhh-c
Confidence 999999999999999999999999999999999988789999999999999999998888888889999999999988 8
Q ss_pred EEEEeeccc-ccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 432 VFVVTSKRS-MLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 432 v~v~~~~~~-~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
++++...+. ..+++..||+||||+++.+|++|++++++.|++...+++
T Consensus 419 ~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~~~ 467 (467)
T KOG1358|consen 419 VLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASAVL 467 (467)
T ss_pred ceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHhhC
Confidence 999888764 566777889999999999999999999999999887653
No 2
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=4.3e-86 Score=682.03 Aligned_cols=481 Identities=82% Similarity=1.266 Sum_probs=439.4
Q ss_pred ChhhHHHHHHhHHHHHHHHhcCCCCcceEEEEEeehHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHhhcCCCC
Q 011567 1 MASFILNFVNTMLNRVKLALDSPSAGAVVFGVHISGHLFVEVLLLVVILFLLSQKSYKPPKRPLTKKEIDELCDEWVPES 80 (483)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~l~~~~~~~~ 80 (483)
|++++.++++..++||..+++.|.++|||||.+..+|+++|++|++|++|++++|+|++++.+||++|+|+||+||+|||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (481)
T PLN02822 1 MALNVLNLVNAALERVTMLLEAPLARAVVFGVHIGGHLVVEGLLIVVIVFLLSQKSYKPPKRPLTEKEIDELCDEWTPEP 80 (481)
T ss_pred CchhHHHHHHHHHHHHHHHhcccccceeEeecCCCchhHHHHHHHHHHHHHHHcCcCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 78999999999999999999999999999999999999999999999999999999998777999999999999999999
Q ss_pred CCcccccccccCCCccccCCCCeEEECCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHH
Q 011567 81 LIPPIIEEMRCEPPVLESAAGPHTIISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCE 160 (483)
Q Consensus 81 ~~~~~~~~~~~~~~~i~~~~g~~~~~~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~ 160 (483)
|+|+.++.+....+++++++|++++++|++||||++++|+|+.+||++++++.+++++||+|+|+||++||+.+.+.+||
T Consensus 81 l~~~~~~~~~~~~~~~~~~~G~~i~~~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Le 160 (481)
T PLN02822 81 LIPPITEEMRPEPPVLESAAGPHTIINGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCE 160 (481)
T ss_pred CCCCCchhccccCCceecCCCCeEEECCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHH
Confidence 99998877655677899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhh
Q 011567 161 ARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNK 240 (483)
Q Consensus 161 ~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~ 240 (483)
++||+++|.+++++|++|+.++.++++++++|+|+|+++..+|++++.++.+++.++++++|||+++++..+++...+.+
T Consensus 161 e~La~~~~~~~~i~~s~G~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~ 240 (481)
T PLN02822 161 TKIAKFLGTPDSILYSYGLSTIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENK 240 (481)
T ss_pred HHHHHHhCCCCEEEECCHHHHHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987654322
Q ss_pred hccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccC
Q 011567 241 RAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT 320 (483)
Q Consensus 241 ~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~ 320 (483)
+.+.++++|++|++++++|.+.||++|+++|++||++||+||+|++|++|++|+|+++|+++.+.++||+++||||++|+
T Consensus 241 ~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~ 320 (481)
T PLN02822 241 RKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALAT 320 (481)
T ss_pred ccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhh
Confidence 12234589999999999999999999999999999999999999999999999999999999767789999999999999
Q ss_pred CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCE
Q 011567 321 EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPI 400 (483)
Q Consensus 321 ~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i 400 (483)
.|||++++++++++++....+++|++++||+.+++++++|+.+++.++++++++++++++++.|++.+|+++..++.+|+
T Consensus 321 ~GG~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi 400 (481)
T PLN02822 321 EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPI 400 (481)
T ss_pred CCeEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCE
Confidence 99999999999999998889999999999999999999999887767899999999999999999877888877778999
Q ss_pred EEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 401 VFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 401 ~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
+++.+++..+....+....+++++++++++||++.+..++..++...++.+|+++++.+|++||++++++|++++.+++.
T Consensus 401 ~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~~~ 480 (481)
T PLN02822 401 VFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASVLK 480 (481)
T ss_pred EEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 99999643222222445577899998867799999987776655544567999999999999999999999999999875
Q ss_pred c
Q 011567 481 D 481 (483)
Q Consensus 481 ~ 481 (483)
+
T Consensus 481 ~ 481 (481)
T PLN02822 481 K 481 (481)
T ss_pred C
Confidence 3
No 3
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=9.8e-68 Score=519.45 Aligned_cols=362 Identities=38% Similarity=0.660 Sum_probs=334.9
Q ss_pred cccCCCCeEEECCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEe
Q 011567 96 LESAAGPHTIISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILY 175 (483)
Q Consensus 96 i~~~~g~~~~~~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~ 175 (483)
+.+..+..+..+|++++||+||||||++.||++++++.+++++||.|+|++|.++|+.+.|.+||++||+|+|.|++++|
T Consensus 26 ~~~~~~~~~~~~~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~al~f 105 (388)
T COG0156 26 LDRRQGLAIRADGRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEAALLF 105 (388)
T ss_pred ccccCCcceecCCceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEE
Confidence 44444666778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEeccc
Q 011567 176 SYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVY 255 (483)
Q Consensus 176 ~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~ 255 (483)
+||+.||.+++.++++++|+|+.|+..|.|+++|+++++++++.|+|||+++||+.|++.... .+ ++++|++|++|
T Consensus 106 ~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~HnD~~~Le~~l~~~~~~---~~-~~~~IvtegVf 181 (388)
T COG0156 106 SSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKHNDLDHLEALLEEAREN---GA-RRKLIVTEGVF 181 (388)
T ss_pred cccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecCCCHHHHHHHHHhhhcc---CC-CceEEEEeccc
Confidence 999999999999999999999999999999999999999999999999999999999885422 12 47999999999
Q ss_pred CCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCCceeeccHHHHHHH
Q 011567 256 QNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQ 335 (483)
Q Consensus 256 ~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~~~~~~~ 335 (483)
+|+|+++||++|++||+|||++|++||+|+.|++|++|+|+++++|+.+.++||+++||+|+||+.|||++++..+++++
T Consensus 182 SMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~Gg~v~g~~~~~d~L 261 (388)
T COG0156 182 SMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSGGYIAGSAALIDYL 261 (388)
T ss_pred cCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccCceeeCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999989999999999999999999999999999999
Q ss_pred HhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 011567 336 RLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 415 (483)
Q Consensus 336 ~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~ 415 (483)
+..+.+|+||+++||..++++.++++.+++.++.+++++++..++++.++.. ++.+. +..+||+++.+. +
T Consensus 262 ~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~-~~~~~-~s~s~I~pv~~g--------d 331 (388)
T COG0156 262 RNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL-GLVLL-PSESPIIPVILG--------D 331 (388)
T ss_pred HHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCccC-CCCCCeeeeEeC--------C
Confidence 9999999999999999999999999999998899999999999999777664 77664 458999999985 4
Q ss_pred HHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 416 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 416 ~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
+..+.++...++++ ||++.+..+|++++.. ++||+++++.||++||+++++++.++
T Consensus 332 ~~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gt--arlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 332 EERALEASRALLEE-GIYVSAIRPPTVPKGT--ARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred HHHHHHHHHHHHHC-CeeEeeecCCCCCCCc--ceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 45677888887776 9999999999986654 66999999999999999999998864
No 4
>PLN02955 8-amino-7-oxononanoate synthase
Probab=100.00 E-value=3.7e-59 Score=468.67 Aligned_cols=346 Identities=23% Similarity=0.377 Sum_probs=314.1
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhh
Q 011567 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAI 186 (483)
Q Consensus 107 ~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai 186 (483)
.+|+++||+|+||||+..||++++++.+++++||+|+|++|.++|+.+.|.+||++||+|+|.|++++|+||+.||.+++
T Consensus 100 ~~r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i 179 (476)
T PLN02955 100 RFKKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKEDCLVCPTGFAANMAAM 179 (476)
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCcEEEECChHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhh--------------ccCCcEEEEcCCchhHHHhHhhhc----CCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEE
Q 011567 187 PCF--------------CKKGDLIVADEGVHWGIQNGLYLS----RSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRY 248 (483)
Q Consensus 187 ~~~--------------~~~gdiI~~~~~~h~s~~~g~~~s----~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~ 248 (483)
+++ .+++|.|+.|..+|.|++.|++++ +.++..|+|||+++|+++|++... .+++
T Consensus 180 ~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HND~~~Le~~L~~~~~-------~~~~ 252 (476)
T PLN02955 180 VAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHCDMYHLNSLLSSCKM-------KRKV 252 (476)
T ss_pred HHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCCCHHHHHHHHHhCCC-------CceE
Confidence 887 367889999999999999999998 578899999999999999987543 2689
Q ss_pred EEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCCceeecc
Q 011567 249 IVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGS 328 (483)
Q Consensus 249 iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~ 328 (483)
|++|++|++.|++.||++|+++|++||++||+||+|++|++|++|+|.++++|+. .++||+++||+|++|+.|||++++
T Consensus 253 Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~-~di~ii~~TLsKA~G~~GGfi~gs 331 (476)
T PLN02955 253 VVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLCVGTLSKAAGCHGGFIACS 331 (476)
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCC-CCCcEEEEeCccchhccCceeecH
Confidence 9999999999999999999999999999999999999999999999999999997 678999999999999999999999
Q ss_pred HHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCC
Q 011567 329 ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKS 408 (483)
Q Consensus 329 ~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~ 408 (483)
++++++++..+.+++|++++||..+++++++++.+..++..+++++++.++|++.+ |+++ .+||+.+.+.
T Consensus 332 ~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~~----G~~~----~sPI~pI~ig-- 401 (476)
T PLN02955 332 KKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKALS----GVDI----SSPIISLVVG-- 401 (476)
T ss_pred HHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc----CCCC----CCCEEEEEeC--
Confidence 99999999999999999999999999999999999877788999999999999842 5543 5899999984
Q ss_pred CCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 409 TGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 409 ~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
++....++++++++ +||++.+..||+++... .+|||++++.||++||++++++|.++...+.
T Consensus 402 ------~~~~a~~~~~~L~~-~Gi~v~~i~yPtVP~g~--~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~ 463 (476)
T PLN02955 402 ------NQEKALKASRYLLK-SGFHVMAIRPPTVPPNS--CRLRVTLSAAHTTEDVKKLITALSSCLDFDN 463 (476)
T ss_pred ------CHHHHHHHHHHHHH-CCCEEEEECCCCCCCCC--ceEEEeeCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 34456677887665 59999999999984432 4599999999999999999999998876543
No 5
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-56 Score=405.19 Aligned_cols=361 Identities=32% Similarity=0.542 Sum_probs=331.4
Q ss_pred CCccccCCCCeEEECC--eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC
Q 011567 93 PPVLESAAGPHTIISG--KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP 170 (483)
Q Consensus 93 ~~~i~~~~g~~~~~~G--~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e 170 (483)
..++.+.+|+.+.++| |++|||+.|||||++.||+|.+|..+++++||.|..+.|.++|+.+.|..||.+||+|.+.|
T Consensus 49 erVi~s~q~p~i~v~G~~k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rE 128 (417)
T KOG1359|consen 49 ERVITSRQGPTIQVKGSDKKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGRE 128 (417)
T ss_pred eeEEeecccceEEEeccccceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCC
Confidence 5678899999999887 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEE
Q 011567 171 DSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIV 250 (483)
Q Consensus 171 ~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv 250 (483)
++++|.+|+.||..++.++..+.|-|+.|+..|.|+.+|+++.. .+.|-|+-++|..+.+..+. ++++|+
T Consensus 129 D~ilypscfdANag~feail~pedAvfSDeLNhASIIdGirLck----ry~h~dv~~l~~~l~~a~k~------r~klv~ 198 (417)
T KOG1359|consen 129 DTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCK----RYRHVDVFDLEHCLISACKM------RLKLVV 198 (417)
T ss_pred ceEEeccccccchHHHHHhcChhhhhhccccccchhhhhhHHHh----hhccchhHHHHHHHHHhhhh------eEEEEE
Confidence 99999999999999999999999999999999999999999876 67788999999888765443 589999
Q ss_pred EecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEcccccccc-CCCceeeccH
Q 011567 251 VEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA-TEGGFCTGSA 329 (483)
Q Consensus 251 ~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg-~~GG~i~~~~ 329 (483)
++++|+++|++.||++|.+|++|||+++++||+|+-|.+|.||+|..|.+|+. .++||+.+|++|++| ..|||..|++
T Consensus 199 TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm-~~vdiinsTLgKAlGga~GGyttgp~ 277 (417)
T KOG1359|consen 199 TDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVM-GDVDIINSTLGKALGGASGGYTTGPK 277 (417)
T ss_pred ecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCC-CcceehhhhhhhhhcCCCCCCccCCh
Confidence 99999999999999999999999999999999999999999999999999986 789999999999998 6799999999
Q ss_pred HHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCC
Q 011567 330 RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKST 409 (483)
Q Consensus 330 ~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~ 409 (483)
.+++.++..+.+|.||.++||.....+.++++.+-...+.+.+.+.+.+++++.+.. .|+.+.+. ..||.++.+.
T Consensus 278 ~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~-aGftIsg~-~hPI~pv~lG--- 352 (417)
T KOG1359|consen 278 PLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEA-AGFTISGA-SHPICPVMLG--- 352 (417)
T ss_pred hHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-cCceecCC-CCCccceecc---
Confidence 999999999999999999999999999999998877777899999999999999876 59998865 6899999884
Q ss_pred CCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 410 GSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 410 ~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
+.+++.++++++|+. |+++....||.+++.. ..||+.+++.||+||||++++++.++.+.
T Consensus 353 -----da~lA~~~ad~lLk~-Gi~Vigfs~PvVP~gk--ariRVqiSAaHt~edid~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 353 -----DARLASKMADELLKR-GIYVIGFSYPVVPKGK--ARIRVQISAAHTEEDIDRLIEAFSEVGRF 412 (417)
T ss_pred -----cHHHHHHHHHHHHhc-CceEEeecCCcCCCCc--eEEEEEEehhcCHHHHHHHHHHHHHHHHh
Confidence 556777899998875 9999999999885442 34999999999999999999999988754
No 6
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=100.00 E-value=5.3e-53 Score=396.31 Aligned_cols=351 Identities=26% Similarity=0.460 Sum_probs=326.1
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhh
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPC 188 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~ 188 (483)
+++--+|||+|||++.||+|.+|+.+++++||.|++|.|.+.|+...|.+||+.||++.+.+.+++|+|++-||.+.+-.
T Consensus 171 k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLft 250 (570)
T KOG1360|consen 171 KKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFT 250 (570)
T ss_pred CceEEEecCccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHH
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hcc--CCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHH
Q 011567 189 FCK--KGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDE 266 (483)
Q Consensus 189 ~~~--~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~ 266 (483)
+.+ +|-+|+.|+..|.|++.|++-++.+-..|+|||+++|+++|++.... ..++|..|.+++++|.++||++
T Consensus 251 Lak~lpgcei~SD~gNHASMI~GIrns~v~K~IFrHND~~hL~~lL~~~~~s------vPKivAFEtVhSM~Gavcplee 324 (570)
T KOG1360|consen 251 LAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRHNDLDHLEQLLQSSPKS------VPKIVAFETVHSMDGAVCPLEE 324 (570)
T ss_pred HHHHCCCcEEeccccchHHHHHHhhhcCCcceeeccCCHHHHHHHHHhCCCC------CCceEEEeeeeccCCCcCCHHH
Confidence 765 78999999999999999999999999999999999999999986554 5789999999999999999999
Q ss_pred HHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCCceeeccHHHHHHHHhcCCceeecC
Q 011567 267 LIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSA 346 (483)
Q Consensus 267 l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~~~~~~~~~~~~~~~fs~ 346 (483)
|.++++|||.+-++||+|..|.+|++|.|..|+-|+- ..+||+.||++|+||..|||++++..++|.+|....+|+|++
T Consensus 325 lcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm-~kvDiIsGTLgKafGcVGGYIAat~~LvDmiRSyAaGFIFTT 403 (570)
T KOG1360|consen 325 LCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVM-HKVDIISGTLGKAFGCVGGYIAATRKLVDMIRSYAAGFIFTT 403 (570)
T ss_pred HHHHHHHhCceeeeehhhhhccccCCCCCccccCCcc-hhhhhcccchhhhcccccceehhhhhHHHHHHHhcCceEEec
Confidence 9999999999999999999999999999999999985 789999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHH
Q 011567 347 SLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIAD 424 (483)
Q Consensus 347 ~~~p~~~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~ 424 (483)
++||+.++.|+++++++... ..++..-+++.+++++.|.++ |+++.+. .+.|+++++. +..+..++++
T Consensus 404 SLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~-GiPVi~~-pSHIiPv~vg--------da~l~~~~sd 473 (570)
T KOG1360|consen 404 SLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL-GIPVIPN-PSHIIPVRVG--------DAALAKQASD 473 (570)
T ss_pred CCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc-CCcccCC-Ccceeeeecc--------CHHHHHHHHH
Confidence 99999999999999999754 578888899999999999997 9999865 7899999985 3445667888
Q ss_pred HHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 425 WALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 425 ~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
.++.++||++....||++.... ..|||.|+..||++.++.+++.+..++.++
T Consensus 474 ~Li~~h~iYvQaINyPTV~rG~--E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 474 ILISKHNIYVQAINYPTVARGT--ERLRIAPTPHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred HHHHhcCeEEEeccCCcccccc--eeeecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 8999999999999999985543 459999999999999999999999998876
No 7
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=100.00 E-value=5.8e-51 Score=411.96 Aligned_cols=368 Identities=42% Similarity=0.701 Sum_probs=309.2
Q ss_pred EEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhcc
Q 011567 112 VNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCK 191 (483)
Q Consensus 112 id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~ 191 (483)
|||+|+||||+..||++++++.+++++||+|+|++|.+||+.+.+.+||+++|+++|.++++++++|+.|+.+++.++++
T Consensus 1 ~~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l~~ 80 (392)
T PLN03227 1 LNFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTESAILYSDGASTTSSTVAAFAK 80 (392)
T ss_pred CCCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHhCC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhh---h-ccCccEEEEEecccCCCCCccChHHH
Q 011567 192 KGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNK---R-AKKLRRYIVVEAVYQNSGQIAPLDEL 267 (483)
Q Consensus 192 ~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~---~-~~~~~~~iv~e~v~~~~G~i~~L~~l 267 (483)
+||.|++++..|.++..++.+++.++++++|+|++++++.++....... + ...++++|++|++++++|.+.|+++|
T Consensus 81 ~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i 160 (392)
T PLN03227 81 RGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKEL 160 (392)
T ss_pred CCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHH
Confidence 9999999999999999999999999999999999999988876543210 0 11247899999999999999999999
Q ss_pred HHHHHHcCcEEEEeCccccccccCCCCccccccCCCC-CceeEEEccccccccCCCceeeccHHHHHHHHhcCCceeecC
Q 011567 268 IRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPV-DKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSA 346 (483)
Q Consensus 268 ~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~-~~~Di~~~s~~K~lg~~GG~i~~~~~~~~~~~~~~~~~~fs~ 346 (483)
+++|++||+++|+||+|++|.+|++|+|..+++|+.| .++||++.|++|++|+.||++++++++++.++....+++|++
T Consensus 161 ~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~gg~v~~~~~~~~~~~~~~~~~~~~~ 240 (392)
T PLN03227 161 VALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVGGMTVGSEEVVDHQRLSGSGYCFSA 240 (392)
T ss_pred HHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccCcEEecCHHHHHHHHHhCcCccccC
Confidence 9999999999999999999999999999999999975 678999999999999999999999999998887778889999
Q ss_pred CCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCce----------eecCCCCCEEEEEecCCCCCc-hhh
Q 011567 347 SLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLS----------IASNPESPIVFLILEKSTGSM-KND 415 (483)
Q Consensus 347 ~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~----------i~~~~~~~i~~l~l~~~~~~~-~~~ 415 (483)
++||+.++++.++++.+.+.+++++++++++++|++.|++. +++ +.....+|++.+.+.+..... ..+
T Consensus 241 ~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~ 319 (392)
T PLN03227 241 SAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDE 319 (392)
T ss_pred CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhh
Confidence 88999888888888765556679999999999999999752 332 122346889999985421100 001
Q ss_pred HHHHHHHHHHHHHhCCEEEEeeccccc--ccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011567 416 LQLLEDIADWALKEDGVFVVTSKRSML--DKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLRD 481 (483)
Q Consensus 416 ~~~~~~i~~~~l~~~Gv~v~~~~~~~~--~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~ 481 (483)
.....++++.+++ +|+++.+...... ....+|..||+++++.||+|||++++++|++++++++-|
T Consensus 320 ~~~~~~~~~~~~~-~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~~~~ 386 (392)
T PLN03227 320 TLILDQIAHHSLS-EGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAILCK 386 (392)
T ss_pred hhHHHHHHHHHHH-CCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 1234577877665 5998865321110 011134569999999999999999999999999887643
No 8
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=1.2e-49 Score=405.84 Aligned_cols=353 Identities=28% Similarity=0.500 Sum_probs=308.2
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhh
Q 011567 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAI 186 (483)
Q Consensus 107 ~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai 186 (483)
+|++++||+|+||||++.||++++|+.+++++||.+++++|..+|+.+.+.+|+++||+++|.++++++++|++|+..++
T Consensus 43 ~~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai 122 (402)
T TIGR01821 43 GAKDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKESALVFTSGYVANDATL 122 (402)
T ss_pred CCeeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcc--CCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccCh
Q 011567 187 PCFCK--KGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPL 264 (483)
Q Consensus 187 ~~~~~--~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L 264 (483)
+.+.+ ++++|+.+..+|.++..++..++.++..++|+|+++++++++..... .+++|++|++++++|.+.|+
T Consensus 123 ~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~------~~~~v~~e~~~~~~G~~~~l 196 (402)
T TIGR01821 123 ATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRHNDVAHLEKLLQSVDPN------RPKIIAFESVYSMDGDIAPI 196 (402)
T ss_pred HHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECCCCHHHHHHHHHhccCC------CCeEEEEcCCCCCCCCccCH
Confidence 88765 78999999999999999999999988889999999999998754321 36899999999999999999
Q ss_pred HHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCCceeeccHHHHHHHHhcCCceee
Q 011567 265 DELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVF 344 (483)
Q Consensus 265 ~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~~~~~~~~~~~~~~~f 344 (483)
++|+++|++||+++|+||+|++|++|++|.|+.+++++. +++|++++|++|++|..|||+++++++++.++....++.|
T Consensus 197 ~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~-~~~div~~t~sKa~g~~GG~i~~~~~~~~~l~~~~~~~~~ 275 (402)
T TIGR01821 197 EEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLM-HRIDIIEGTLAKAFGVVGGYIAASRKLIDAIRSYAPGFIF 275 (402)
T ss_pred HHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCC-CCCeEEEEechhhhccCCceeecCHHHHHHHHHhCcCcee
Confidence 999999999999999999999999999888887777764 4569999999999999999999999999999877777888
Q ss_pred cCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHH
Q 011567 345 SASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIAD 424 (483)
Q Consensus 345 s~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~ 424 (483)
+++.+|..++++.++++.+++.+.+.++++++.+++++.|+++ |+++.. +.++++.+.++. .....++++
T Consensus 276 t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~i~~i~~~~--------~~~a~~~~~ 345 (402)
T TIGR01821 276 TTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL-GIPVIP-NPSHIVPVIIGD--------AALCKKVSD 345 (402)
T ss_pred cCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCC-CCCCEEEEEeCC--------HHHHHHHHH
Confidence 8889999999999999998876667778889999999999886 777654 367888877632 123456777
Q ss_pred HHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 425 WALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 425 ~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
.+++++||++.+..+|.++.. ...|||++++.+|++|+++++++|+++++++
T Consensus 346 ~L~~~~Gi~v~~~~~p~~~~g--~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 346 LLLNKHGIYVQPINYPTVPRG--TERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred HHHhcCCEEEEeECCCCCCCC--CceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 766667999998877765322 1459999999999999999999999988764
No 9
>PLN02483 serine palmitoyltransferase
Probab=100.00 E-value=1e-49 Score=412.34 Aligned_cols=361 Identities=27% Similarity=0.479 Sum_probs=311.6
Q ss_pred CCeeEEEeecCCCCCCCC-ChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhh
Q 011567 107 SGKEVVNFASANYLGLIG-HEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSA 185 (483)
Q Consensus 107 ~G~~~id~~s~~~lG~~~-~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~a 185 (483)
+++++|||+|+||||+.. ++...+++.+++++||+++|++|..||+.+.+.++|+++|+++|.++++++++|+.++..+
T Consensus 98 ~~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~~ai~~~~G~~an~~~ 177 (489)
T PLN02483 98 KTRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKPAAIVFGMGYATNSTI 177 (489)
T ss_pred CCceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHH
Confidence 468999999999999974 6788999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhh-hhh--ccCccEEEEEecccCCCCCcc
Q 011567 186 IPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTAD-NKR--AKKLRRYIVVEAVYQNSGQIA 262 (483)
Q Consensus 186 i~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~-~~~--~~~~~~~iv~e~v~~~~G~i~ 262 (483)
++++.++||.|++++.+|.++..+++.+|.+++.++|+|+++|++.+++.... .++ .|.++.+|++|++++++|.+.
T Consensus 178 i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~ 257 (489)
T PLN02483 178 IPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELC 257 (489)
T ss_pred HHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCccc
Confidence 99999999999999999999999999999999999999999999988753211 011 122356899999999999999
Q ss_pred ChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCCceeeccHHHHHHHHhcCCce
Q 011567 263 PLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGY 342 (483)
Q Consensus 263 ~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~~~~~~~~~~~~~~ 342 (483)
++++|+++|++||++||+||+|++|.+|++|+|..+++++.+.++||+++|+||++|+.|||++++++++++++....++
T Consensus 258 ~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~GG~i~~~~~li~~l~~~~~~~ 337 (489)
T PLN02483 258 KLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKRTCPAH 337 (489)
T ss_pred CHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCceEEEcCHHHHHHHHHhCccc
Confidence 99999999999999999999999999999999999999998888999999999999999999999999999998877777
Q ss_pred eecCCCcHHHHHHHHHHHHHHhcC------cHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhH
Q 011567 343 VFSASLPPYLASAAITAIDVLEEN------PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDL 416 (483)
Q Consensus 343 ~fs~~~~p~~~aaa~~al~~l~~~------~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~ 416 (483)
.|+.+++|..++++.++++.+... .+.+++++++.+++++.|+++ |+.+.++.++|++++.+..+
T Consensus 338 ~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~~~~~sp~~~l~l~~~-------- 408 (489)
T PLN02483 338 LYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNP-------- 408 (489)
T ss_pred cccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCEEEEEECCH--------
Confidence 788777888888888889877522 246788999999999999987 88877666788988887321
Q ss_pred HHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 417 QLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 417 ~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
....++++.+++ +||.+.+..++..+.. .+.+|+++++.+|++||++++++|+++++.+.
T Consensus 409 ~~~~~~~~~Ll~-~GI~v~~~~fp~~p~~--~~~vRi~isa~~t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 409 AKIPAFSRECLK-QNVAVVVVGFPATPLL--LARARICISASHSREDLIKALEVISEVGDLVG 468 (489)
T ss_pred HHHHHHHHHHHH-CCcEEeeeCCCCCCCC--CceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 234467877776 5999997666543211 24599999999999999999999999887654
No 10
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=2.9e-49 Score=403.31 Aligned_cols=353 Identities=28% Similarity=0.471 Sum_probs=306.3
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhh
Q 011567 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAI 186 (483)
Q Consensus 107 ~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai 186 (483)
+|++++||+|++|||+..||+|++++.+++++||.++++++.++|+.+.+.+||++||+++|.+.+++++||++|+..++
T Consensus 43 ~~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai 122 (406)
T PRK13393 43 GPREVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEAALLFTSGYVSNWAAL 122 (406)
T ss_pred CCccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHH
Confidence 35899999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred hhhcc--CCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccCh
Q 011567 187 PCFCK--KGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPL 264 (483)
Q Consensus 187 ~~~~~--~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L 264 (483)
+++.+ ++|+|+++..+|.++..+++.++.++..++|+|++++++.++....+ ++++|++|++++++|.+.|+
T Consensus 123 ~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~------~~~~v~~~~v~~~~G~~~~l 196 (406)
T PRK13393 123 STLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRHNDPADLERKLSDLDPH------RPKLVAFESVYSMDGDIAPI 196 (406)
T ss_pred HHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCCCCHHHHHHHHHhccCC------CCEEEEEcCCCCCCCchhCH
Confidence 98765 78999999999999999999999999899999999999988754221 36899999999999999999
Q ss_pred HHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCCceeeccHHHHHHHHhcCCceee
Q 011567 265 DELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVF 344 (483)
Q Consensus 265 ~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~~~~~~~~~~~~~~~f 344 (483)
++|.++|++||+++|+||+|+.|.+|++|.|+.+++++. +++||+++|++|++|..|||+++++++++.++....+|.|
T Consensus 197 ~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~-~~~~i~~~tlsKa~g~~GG~~~~~~~~~~~l~~~~~~~~~ 275 (406)
T PRK13393 197 AEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLA-DRLTIIEGTLAKAFGVMGGYITGSAALCDFIRSFASGFIF 275 (406)
T ss_pred HHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCC-CCCeEEEEeCchhhcccCceeeCCHHHHHHHHHhCcCcee
Confidence 999999999999999999999998999999888888876 4568999999999999999999999999998877777888
Q ss_pred cCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHH
Q 011567 345 SASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIAD 424 (483)
Q Consensus 345 s~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~ 424 (483)
+.+.+|..++++.++++.+++....+++++++.+++++.|+++ ++++. ++.++++.+.+.+ .....++.+
T Consensus 276 t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~i~~v~~~~--------~~~~~~l~~ 345 (406)
T PRK13393 276 TTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA-GIPHL-PNPSHIVPVMVGD--------PVLCKQISD 345 (406)
T ss_pred cCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCeEEEEeCC--------HHHHHHHHH
Confidence 8888999999999999988765445677889999999999875 77655 3478888876632 123456777
Q ss_pred HHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 425 WALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 425 ~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
.+++++||++.+..+|.++.. ...||+++++.+|++|+++++++|++++.++
T Consensus 346 ~L~~~~Gi~v~~~~~p~~p~g--~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 346 ELLDRYGIYVQPINYPTVPRG--TERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred HHHHhCCEEEEeECCCCCCCC--CceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 766656999998877655322 1359999999999999999999999987653
No 11
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=1.1e-48 Score=399.55 Aligned_cols=352 Identities=29% Similarity=0.497 Sum_probs=305.9
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhh
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIP 187 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~ 187 (483)
|++++||+|+||||+..||++.+++.+++++++.+++++|..+|+.+.+.+|+++||+++|.++++++++|++|+..++.
T Consensus 45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai~ 124 (407)
T PRK09064 45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEAALVFTSGYVSNDATLS 124 (407)
T ss_pred CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHH
Confidence 58999999999999998999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhcc--CCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChH
Q 011567 188 CFCK--KGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLD 265 (483)
Q Consensus 188 ~~~~--~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~ 265 (483)
.+.+ ++++|+.+...|.++..++...+.++..++|+|+++|+++++....+ ++++|+++++++++|.+.|++
T Consensus 125 ~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~------~~~~v~~~~v~s~~G~~~~l~ 198 (407)
T PRK09064 125 TLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRHNDVAHLEELLAAADPD------RPKLIAFESVYSMDGDIAPIA 198 (407)
T ss_pred HHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECCCCHHHHHHHHHhccCC------CCeEEEEeCCCCCCccccCHH
Confidence 7754 78899999999999999999999998899999999999998754211 368999999999999999999
Q ss_pred HHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCCceeeccHHHHHHHHhcCCceeec
Q 011567 266 ELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFS 345 (483)
Q Consensus 266 ~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~~~~~~~~~~~~~~~fs 345 (483)
+|+++|++||++||+||+|+.|.+|++|.|+.++.++. +++|++++||||++|+.|||+++++++++.++....++.|+
T Consensus 199 ~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~-~~~div~~t~sKa~g~~GG~~~~~~~~~~~l~~~~~~~~~t 277 (407)
T PRK09064 199 EICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLM-DRIDIIEGTLAKAFGVMGGYIAGSAALVDAVRSYAPGFIFT 277 (407)
T ss_pred HHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCC-CCCeEEEEecchhhhccCceEecCHHHHHHHHHhCcccccc
Confidence 99999999999999999999888899998887777764 45699999999999999999999999999888776778888
Q ss_pred CCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHH
Q 011567 346 ASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADW 425 (483)
Q Consensus 346 ~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~ 425 (483)
++.+|..++++.++++.+++.+..+++++++++++++.|+++ |+++.. +.++++.+.+++ .....++.+.
T Consensus 278 ~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~iv~i~~~~--------~~~~~~l~~~ 347 (407)
T PRK09064 278 TSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA-GIPVMP-NESHIVPVMVGD--------PEKCKKASDM 347 (407)
T ss_pred CcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCC-CCCCEEEEEeCC--------HHHHHHHHHH
Confidence 888999999999999999876666788999999999999886 777654 467888877632 1234567777
Q ss_pred HHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 426 ALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 426 ~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
+++++||++.+..+|.++.. ...|||++++.+|++|+++++++|+++++++
T Consensus 348 L~~~~gi~v~~~~~p~~~~~--~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 348 LLEEHGIYVQPINYPTVPRG--TERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred HHHhCCEEEeeECCCCCCCC--CceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 76667999998776654211 1359999999999999999999999988764
No 12
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.7e-50 Score=384.58 Aligned_cols=356 Identities=30% Similarity=0.494 Sum_probs=313.6
Q ss_pred eEEEeecCCCCCCCC-ChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhh
Q 011567 110 EVVNFASANYLGLIG-HEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPC 188 (483)
Q Consensus 110 ~~id~~s~~~lG~~~-~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~ 188 (483)
++||++|+||||+.. +-.-.+++.+.+++||...|+++...|+.+.|.++|+..|+|+|.+++++|+.|+.+|...+++
T Consensus 137 ~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p~ 216 (519)
T KOG1357|consen 137 RCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGVEDAIVFSMGFATNSMNIPS 216 (519)
T ss_pred eeeeecccccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCCcceEEEeccccccccCcce
Confidence 799999999999974 4566788899999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhh-hhh--ccCccEEEEEecccCCCCCccChH
Q 011567 189 FCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTAD-NKR--AKKLRRYIVVEAVYQNSGQIAPLD 265 (483)
Q Consensus 189 ~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~-~~~--~~~~~~~iv~e~v~~~~G~i~~L~ 265 (483)
+.+++..|+.|+..|.++..|++++|++++.|+||||++||++|++.-.. .++ .|-+..+|++|+++++.|.++.|+
T Consensus 217 l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp 296 (519)
T KOG1357|consen 217 LLGKGSLIISDELNHASLITGARLSGATTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLP 296 (519)
T ss_pred eecCCcceeeccccchheeccccccCceEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccH
Confidence 99999999999999999999999999999999999999999999875433 222 233567899999999999999999
Q ss_pred HHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCCceeeccHHHHHHHHhcCCceeec
Q 011567 266 ELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFS 345 (483)
Q Consensus 266 ~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~~~~~~~~~~~~~~~fs 345 (483)
+++++|+||+++|++||+||.|.+|++|+|.+++++++|.++||+++++.|++|+.|||++|+++++++++..+...+|.
T Consensus 297 ~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~GGyiagsk~lid~lrt~s~~~~ya 376 (519)
T KOG1357|consen 297 EVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAGGYIAGSKELIDYLRTPSPSALYA 376 (519)
T ss_pred HHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcccccceecCcHHHHhhhccCCCceeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHHhcC------cHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHH
Q 011567 346 ASLPPYLASAAITAIDVLEEN------PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLL 419 (483)
Q Consensus 346 ~~~~p~~~aaa~~al~~l~~~------~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~ 419 (483)
++++|..++..+.+++.+... .+..+++.+|..+++..|++. |+-+.++.++|++++.+-.+.. .
T Consensus 377 t~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~~~~k--------~ 447 (519)
T KOG1357|consen 377 TSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLYGPAK--------I 447 (519)
T ss_pred ccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeecCccc--------c
Confidence 999999999999999988742 368899999999999999885 9999999999999988754321 2
Q ss_pred HHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 420 EDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 420 ~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
..+.+.||++ ++.+....+|..+- .....|+|.++.||.|+++++++.+.+.-..
T Consensus 448 ~~f~r~~l~~-nigvVvvgfPatpl--~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~ 502 (519)
T KOG1357|consen 448 VAFSREMLER-NIGVVVVGFPATPL--LESRARFCLSASHTKEDLDRALEVIDRVGDE 502 (519)
T ss_pred cHHHHHHHhc-CceEEEEeCCCchH--HHhHHHhhhcccccHHHHHHHHHHHhhhchh
Confidence 2455566664 67776666653100 0134899999999999999999999877543
No 13
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=1.8e-46 Score=383.38 Aligned_cols=353 Identities=26% Similarity=0.470 Sum_probs=304.2
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhh
Q 011567 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAI 186 (483)
Q Consensus 107 ~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai 186 (483)
+|+++++|+|+||+|+..||.+++++.+++++++.++++++.+||+.+.+.+|+++||+++|.++++++++|++|+..++
T Consensus 44 ~~~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i 123 (410)
T PRK13392 44 GPRRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKESALLFTSGYVSNDAAL 123 (410)
T ss_pred CCceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred hhhcc--CCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccCh
Q 011567 187 PCFCK--KGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPL 264 (483)
Q Consensus 187 ~~~~~--~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L 264 (483)
..+.. ++++|+.+..+|+++..++...|.++..++++|++++++.+++...+ ++++|+++++++++|.+.|+
T Consensus 124 ~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~------~t~~v~i~~~~n~tG~~~~l 197 (410)
T PRK13392 124 STLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHNDLADLEEQLASVDPD------RPKLIAFESVYSMDGDIAPI 197 (410)
T ss_pred HHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhccCC------CCEEEEEeCCCCCCcccccH
Confidence 87754 78999999999999999999999998889999999999888754321 47899999999999999999
Q ss_pred HHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCCceeeccHHHHHHHHhcCCceee
Q 011567 265 DELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVF 344 (483)
Q Consensus 265 ~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~~~~~~~~~~~~~~~f 344 (483)
++|.++|++||+++|+||+|+.|.+|++|+|+.++.++. +++|++++|++|++|..|||+++++++++.++....+|.|
T Consensus 198 ~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~-~~~div~~tlsK~~g~~GG~~~~~~~~~~~l~~~~~~~~~ 276 (410)
T PRK13392 198 EAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLM-DRIDMIQGTLAKAFGCLGGYIAASADLIDFVRSFAPGFIF 276 (410)
T ss_pred HHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCC-CCCcEEEEEChHhhhcccchhhcCHHHHHHHHHhCcchhc
Confidence 999999999999999999999888888888877666654 4568999999999999999999999999988877777888
Q ss_pred cCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHH
Q 011567 345 SASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIAD 424 (483)
Q Consensus 345 s~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~ 424 (483)
+.+.||..++++.++|+.++......++++++.+++++.|+++ |+++. ++.++++.+.++. .....++++
T Consensus 277 s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~--------~~~~~~~~~ 346 (410)
T PRK13392 277 TTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN-GIPVM-PSPSHIVPVMVGD--------PTLCKAISD 346 (410)
T ss_pred cCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC--------HHHHHHHHH
Confidence 8888899899999999988766667788899999999999886 87765 3467887776632 123456787
Q ss_pred HHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 425 WALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 425 ~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
++++++||++.+..++.++.. ...||+++++.+|++|+++++++|+++.+++
T Consensus 347 ~L~~~~GI~v~~~~~p~~~~~--~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 347 RLMSEHGIYIQPINYPTVPRG--TERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred HHHHhCCEEEeeeCCCCCCCC--CceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 776667999998777654321 1359999999999999999999999987653
No 14
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-47 Score=364.31 Aligned_cols=343 Identities=22% Similarity=0.325 Sum_probs=285.4
Q ss_pred CCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC
Q 011567 93 PPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (483)
Q Consensus 93 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g 168 (483)
|.++++++|.++| .+||+||||.++ +.||| .||.+++++++|+++....| +.+ +.+...+|.++|++..+
T Consensus 25 ~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH-~hP~iv~al~~Q~~kl~h~s---n~~--~~~~~~~la~~L~~~s~ 98 (404)
T COG4992 25 PVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGH-CHPALVEALKEQAEKLWHVS---NLF--YNEPQAELAEKLVELSP 98 (404)
T ss_pred ceeEEeccccEEECCCCCEeeeeccceeeeccCC-CCHHHHHHHHHHHHHhhhcc---ccc--CChHHHHHHHHHHhhCc
Confidence 4678999999999 899999999998 89999 89999999999999964422 223 45788999999999997
Q ss_pred -CCCEEEecccHHHHHhhhhh---hcc---CCcEEEEcCCchhHHHhHhhhcCC------------eEEEecCCCHHHHH
Q 011567 169 -TPDSILYSYGLSTMFSAIPC---FCK---KGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHNDMDSLR 229 (483)
Q Consensus 169 -~e~~i~~~sG~~a~~~ai~~---~~~---~gdiI~~~~~~h~s~~~g~~~s~~------------~v~~~~~~d~~~Le 229 (483)
.+.++++|||+|||++|++. +++ +.++|.+.+++|+.+...+.+++- .+..+++||+++++
T Consensus 99 ~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~ 178 (404)
T COG4992 99 FADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALE 178 (404)
T ss_pred cccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHH
Confidence 88888999999999999864 444 668999999999988877766553 34678899999999
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cccCCCC
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EHCGVPV 304 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~~~v~~ 304 (483)
+.+.+ .+++|++||++..+|.+.| |+++++||++||++||+||+|++ +||||+.++ +|+|+.|
T Consensus 179 ~ai~~----------~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG--~GRTGk~fA~e~~gV~P 246 (404)
T COG4992 179 AAIDE----------DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTG--LGRTGKLFAYEHYGVEP 246 (404)
T ss_pred HHhcc----------CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccC--CCccchHHHHHHhCCCC
Confidence 99977 2899999999999998887 99999999999999999999997 899999775 9999999
Q ss_pred CceeEEEccccccccCCCce----eeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Q 011567 305 DKIDIVTAAMGHALATEGGF----CTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAIL 380 (483)
Q Consensus 305 ~~~Di~~~s~~K~lg~~GG~----i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l 380 (483)
||+ +++|+|| ||| ++.++.+.+.+....|+.+|++ ||++|+++.++++.+.++ ++.++.++.+++|
T Consensus 247 ---DI~--tlaK~Lg--GG~PigA~la~~~~~~~~~~G~HgSTfGG--NpLacAv~~a~l~~l~~e-~ll~~v~~~g~~~ 316 (404)
T COG4992 247 ---DIL--TLAKALG--GGFPIGAMLATEEIASAFTPGDHGSTFGG--NPLACAVALAVLEVLLEE-GLLENVREKGEYL 316 (404)
T ss_pred ---CEE--Eeecccc--CCccceeeEEchhhhhcCCCCcccCCCCc--CHHHHHHHHHHHHHHcch-hHHHHHHHHHHHH
Confidence 898 7999998 554 4556777777888888888876 899999999999999874 5999999999999
Q ss_pred HHhhccCC-Cceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccC
Q 011567 381 RTGLSDIH-GLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSA 457 (483)
Q Consensus 381 ~~~L~~~~-~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~ 457 (483)
++.|.++. .+++. ..+.+.++.+.+..+. .+.+++..+. +.|+++.+... .-||+.|++
T Consensus 317 ~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~--------~a~~~~~~~~-~~gvL~~~a~~---------~ViR~~PpL 378 (404)
T COG4992 317 LQRLRELKRRYPLVKEVRGRGLMIGIELKEPY--------RARDIVRALR-EEGVLVLPAGP---------NVIRFLPPL 378 (404)
T ss_pred HHHHHHHhhcCCceeeeecceeEEEEEecCcc--------cHHHHHHHHH-HCCeEEecCCC---------CeEEecCCc
Confidence 99998863 33322 2456888999885431 2446777655 46999876543 239999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhc
Q 011567 458 AHSEADLVKACESLKRISAVVLRD 481 (483)
Q Consensus 458 ~~t~edi~~~~~~l~~~~~~~~~~ 481 (483)
.+|++|++++++++++++.....+
T Consensus 379 ~i~~eei~~~~~~l~~~l~~~~~~ 402 (404)
T COG4992 379 VITEEEIDEALDALERALAAASAR 402 (404)
T ss_pred cCCHHHHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999876543
No 15
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=3.1e-44 Score=365.41 Aligned_cols=369 Identities=34% Similarity=0.560 Sum_probs=310.8
Q ss_pred CCCccccCCCCeEEE-CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC
Q 011567 92 EPPVLESAAGPHTII-SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP 170 (483)
Q Consensus 92 ~~~~i~~~~g~~~~~-~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e 170 (483)
.+.++.++.|.+++. +|+++|||++++|||+..+|++++++.++++++|.++++++.+.|+.+.+.++|+.+|+++|.+
T Consensus 20 ~~~~~~~~~~~~~~~~~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~~ 99 (393)
T TIGR01822 20 SERIITSPQGADIRVADGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGTE 99 (393)
T ss_pred cccccccCCCceEEecCCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCC
Confidence 366788899999996 9999999999999999889999999999999999999999988898899999999999999999
Q ss_pred CEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEE
Q 011567 171 DSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIV 250 (483)
Q Consensus 171 ~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv 250 (483)
+++++++|++|+..++.++.++||.|+++...|.++..++.+.+.+...+.++|+++|++.+++.... +.++++|+
T Consensus 100 ~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~----~~~~~~v~ 175 (393)
T TIGR01822 100 DTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEARAA----GARHRLIA 175 (393)
T ss_pred cEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhhc----CCCceEEE
Confidence 99999999999999999999999999999999999999999888888888899999999988764211 11378999
Q ss_pred EecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEcccccccc-CCCceeeccH
Q 011567 251 VEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA-TEGGFCTGSA 329 (483)
Q Consensus 251 ~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg-~~GG~i~~~~ 329 (483)
++++++++|.+.|+++|+++|++||++||+||+|++|.+|.+|++..+..++. .++|++++|+||+++ ..|||+++++
T Consensus 176 ~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l~g~r~G~~~~~~ 254 (393)
T TIGR01822 176 TDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKALGGASGGFTTARK 254 (393)
T ss_pred EeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHhhCCCcEEEEeCH
Confidence 99999999999999999999999999999999999998888887776666665 367999999999996 5689999999
Q ss_pred HHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCC
Q 011567 330 RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKST 409 (483)
Q Consensus 330 ~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~ 409 (483)
++++.++.....+.|+++.++..++++.++++.++..++.+++++++.+++++.|++. |+.+.. +.++++.+.+.+
T Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~i~~~~-- 330 (393)
T TIGR01822 255 EVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA-GFDIKP-ADHPIIPVMLYD-- 330 (393)
T ss_pred HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCC-CCCCEEEEEeCC--
Confidence 9999887766677888777888777888888887655678899999999999999875 777653 356777776532
Q ss_pred CCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 410 GSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 410 ~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
.....++++.+++ +||.+....++..+.. ...+|++++..+|++||++++++|+++++++
T Consensus 331 ------~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~--~~~iRis~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 331 ------AVLAQRFARRLLE-EGIYVTGFFYPVVPKG--QARIRVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred ------HHHHHHHHHHHHH-CCeeEeeeCCCCCCCC--CceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 1234567777665 4999985544432211 1349999999999999999999999987653
No 16
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=4.2e-44 Score=355.38 Aligned_cols=359 Identities=21% Similarity=0.287 Sum_probs=286.4
Q ss_pred cCCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q 011567 91 CEPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKF 166 (483)
Q Consensus 91 ~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~ 166 (483)
..|.++++++|.++| +|||+||||.++ ..+|| +||+|++|+.+|+++... .+. .+.+.+...++.++|.+.
T Consensus 37 ~~p~~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH-~hP~Vv~Av~~q~~~~~h-~~~---~~~~~e~~v~~ae~L~~~ 111 (447)
T COG0160 37 RFPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGH-NHPRVVEAVKRQLAKLNH-THT---RDLYYEPYVELAEKLTAL 111 (447)
T ss_pred cCcceEEecccCEEEeCCCCEEEEcccCcchhccCC-CCHHHHHHHHHHHHHhhc-ccC---CcccchhHHHHHHHHHHh
Confidence 568899999999999 899999999996 57899 899999999999998642 222 222348889999999999
Q ss_pred hCC---CCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcCCe-------------EEEecCC----
Q 011567 167 LGT---PDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRST-------------VVYFKHN---- 223 (483)
Q Consensus 167 ~g~---e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~~~-------------v~~~~~~---- 223 (483)
++. ..+++.+||++||++|++ .+++|..+|.++..||+.+..++.+++.. ++.+++.
T Consensus 112 ~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr 191 (447)
T COG0160 112 APGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYR 191 (447)
T ss_pred CCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCcccc
Confidence 874 345566999999999974 57899999999999999999998887643 2333322
Q ss_pred C-------------HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCcccc
Q 011567 224 D-------------MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSF 286 (483)
Q Consensus 224 d-------------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~ 286 (483)
+ .+.+|+.+.... ..+...+++++||+++.+|.+.| |++++++|+|||+++|+||+|++
T Consensus 192 ~p~~~~~~~~~~~~~~~~e~~i~~~~----~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG 267 (447)
T COG0160 192 CPFGIGGEECGDDALEYIERALFDLE----VGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTG 267 (447)
T ss_pred CcccCchhhhhHHHHHHHHHHHHhhc----CCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 1 122333332221 23456999999999999999887 99999999999999999999987
Q ss_pred ccccCCCCccc-cccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHH
Q 011567 287 GVLGRSGRGLT-EHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL 363 (483)
Q Consensus 287 g~lg~~G~g~~-~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l 363 (483)
+|+||+.++ ||+|+.| ||+ ||+|++|. +-|.+++++++++ .....++++|.+ ||++|++++++|+.+
T Consensus 268 --~GRTG~~fa~E~~gv~P---Div--t~aK~ig~G~Pl~avv~r~ei~~-~~~g~~~~Tf~G--Npva~Aaa~AvL~vi 337 (447)
T COG0160 268 --FGRTGKMFAFEHFGVEP---DIV--TLAKSLGGGLPLSAVVGRAEIMD-WPPGGHGGTFGG--NPVACAAALAVLDVI 337 (447)
T ss_pred --CCccccchhhhhcCCCC---CEE--EecccccCCCceeEEeccHHhcc-cCCcccCCCCCc--CHHHHHHHHHHHHHH
Confidence 789998775 9999988 898 79999983 1255789999999 556666666655 899999999999999
Q ss_pred hcCcHHHHHHHHHHHHHHHhhccCC-CceeecC--CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeec-c
Q 011567 364 EENPDLITKLKKNTAILRTGLSDIH-GLSIASN--PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSK-R 439 (483)
Q Consensus 364 ~~~~~~~~~l~~~~~~l~~~L~~~~-~~~i~~~--~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~-~ 439 (483)
+++ .+.++..+.++++++.|.++. .+++.++ +.+.++.+.+..+..+.+.+.....+++++|+++ |+++.... +
T Consensus 338 e~e-~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~-Glil~~~G~~ 415 (447)
T COG0160 338 EEE-NLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFER-GLLLLTCGPH 415 (447)
T ss_pred HHc-cHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHc-CCEEeccCCC
Confidence 876 599999999999999998753 3545444 3467899988766555556677888999998875 87775443 2
Q ss_pred cccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 440 SMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 440 ~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
. +-|||.|+..+|++++|+++++|+++++++
T Consensus 416 ~--------nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 416 G--------NVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred C--------cEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 2 339999999999999999999999998865
No 17
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-43 Score=361.62 Aligned_cols=348 Identities=26% Similarity=0.384 Sum_probs=294.8
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhh
Q 011567 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAI 186 (483)
Q Consensus 107 ~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai 186 (483)
.|+.++||++++|||+..||++++++.++++++|.+.++++.+.+..+.+.+||++||+++|.++++++++|++|+..++
T Consensus 52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~sG~~An~~~l 131 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFESCLLCQSGWAANVGLL 131 (407)
T ss_pred CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHH
Confidence 46678999999999999999999999999999988777666677666789999999999999999999999999999999
Q ss_pred hhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHH
Q 011567 187 PCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDE 266 (483)
Q Consensus 187 ~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~ 266 (483)
+++.++||.|+++...|.++..++...+.++..++++|+++|++.+++. ++++|+++++++++|.+.|+++
T Consensus 132 ~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~---------~~~lV~v~~v~n~tG~i~pl~~ 202 (407)
T PRK07179 132 QTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRHNDVDHLRRQIERH---------GPGIIVVDSVYSTTGTIAPLAD 202 (407)
T ss_pred HHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecCCCHHHHHHHHHhc---------CCeEEEECCCCCCCCccccHHH
Confidence 9999999999999999999999999999999999999999999988642 2578999999999999999999
Q ss_pred HHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCCceeeccHHHHHHHHhcCCceeecC
Q 011567 267 LIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSA 346 (483)
Q Consensus 267 l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~~~~~~~~~~~~~~~fs~ 346 (483)
|+++|++||+++|+||+|++|.+|++|+|+.+++++. ..+|++++|++|++|+.+|++++++++++.++....++.|++
T Consensus 203 I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~-~~vdi~~~S~sK~~g~~~G~l~~~~~~~~~~~~~~~~~~~~~ 281 (407)
T PRK07179 203 IVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLT-SRVHFITASLAKAFAGRAGIITCPRELAEYVPFVSYPAIFSS 281 (407)
T ss_pred HHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCC-CCCCEEEeechHhhhccCeEEEeCHHHHHHHHHhCcCeeeCC
Confidence 9999999999999999999999999998888778875 467999999999999889999999999888876665667887
Q ss_pred CCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHH
Q 011567 347 SLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWA 426 (483)
Q Consensus 347 ~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~ 426 (483)
+.++..++++.++++.+.+.++.+++++++.+++++.|.++ |+++. ..++++.+.+.. ......+.+.
T Consensus 282 t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~--~~~~i~~l~~~~--------~~~~~~~~~~- 349 (407)
T PRK07179 282 TLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL-GYNIR--SESQIIALETGS--------ERNTEVLRDA- 349 (407)
T ss_pred CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC--CCCCEEEEEeCC--------HHHHHHHHHH-
Confidence 77788777788889888776678899999999999999987 87765 357888887632 1123345554
Q ss_pred HHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 427 LKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 427 l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
|.++||++....++.... .+..|||+++..+|++|+++++++|++++.+.
T Consensus 350 L~~~GI~~~~~~~p~~~~--~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 350 LEERNVFGAVFCAPATPK--NRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred HHHCCceEeeecCCCCCC--CCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 455699865443333211 12459999999999999999999999987763
No 18
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=6.7e-42 Score=347.29 Aligned_cols=366 Identities=30% Similarity=0.577 Sum_probs=304.3
Q ss_pred CCCccccCCCCeEEECCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCC
Q 011567 92 EPPVLESAAGPHTIISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPD 171 (483)
Q Consensus 92 ~~~~i~~~~g~~~~~~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~ 171 (483)
.+.++.+++|.+++++|+++|||++++++|+..+|.+.+++.+++++++...++++.+.|..+...++++++++++|.++
T Consensus 16 ~~~~~~~~~g~~~~~~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~~ 95 (385)
T TIGR01825 16 SIRVLESAQGPRVRVNGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKTEA 95 (385)
T ss_pred cccccccCCCceEEECCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCCCc
Confidence 46779999999999999999999999999998999999999999998876666666677888999999999999999988
Q ss_pred EEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEE
Q 011567 172 SILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVV 251 (483)
Q Consensus 172 ~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~ 251 (483)
.+++++|++++..++.++.++||.|+++.++|.++..++.+.+.++..+++.|++++++.+++.... ++++|++
T Consensus 96 ~i~~~sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~------~~~~v~~ 169 (385)
T TIGR01825 96 ALVFQSGFNTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYKHADMDDLDRVLRENPSY------GKKLIVT 169 (385)
T ss_pred EEEECcHHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhccC------CCeEEEE
Confidence 9999999999999999999999999999999999998988889988888889999999888653321 3788999
Q ss_pred ecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCCceeeccHHH
Q 011567 252 EAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARV 331 (483)
Q Consensus 252 e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~~~ 331 (483)
+++++++|.+.|+++|.++|++||+++|+||+|+.|+++++|.+...++++. .++|++++|+||++|..|||+++++++
T Consensus 170 ~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~gG~~~~~~~~ 248 (385)
T TIGR01825 170 DGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVGGYAAGHKEL 248 (385)
T ss_pred ecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCCCEEecCHHH
Confidence 9999999999999999999999999999999999888887676666667776 467899999999999889999999999
Q ss_pred HHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCC
Q 011567 332 VDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGS 411 (483)
Q Consensus 332 ~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~ 411 (483)
++.+......+.+++..+|..++++.++++.+.+..+..++++++++++.+.|+++ |+++.. +.++++.+.+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~---- 322 (385)
T TIGR01825 249 IEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL-GYDTGG-SETPITPVVIGD---- 322 (385)
T ss_pred HHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCC-CCCCEEEEEECC----
Confidence 99887655556666556778788888889877655568888999999999999886 777653 356777766531
Q ss_pred chhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 412 MKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 412 ~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
.....++++.++++ ||.+....++..+.. ...||++++..+|++|++++++++++++++
T Consensus 323 ----~~~~~~~~~~L~~~-gi~v~~~~~~~~~~~--~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 323 ----EKAAQEFSRRLFDE-GIFAQSIVFPTVPRG--TARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred ----HHHHHHHHHHHHHC-CcEEcccCCCCCCCC--CceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 11234677777665 999865444322111 134999999999999999999999998865
No 19
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=2.5e-42 Score=336.05 Aligned_cols=353 Identities=20% Similarity=0.307 Sum_probs=286.1
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|+++++++|+|+| +||++||||+.+ .-||| .||.|.+|+.+++++ |.. |..+++...++++.|++.+
T Consensus 35 ~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH-~~p~V~~Av~~~l~~-G~~------fg~Pte~Ei~~Aell~~~~ 106 (432)
T COG0001 35 YPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGH-AHPAVVEAVQEQLER-GLS------FGAPTELEVELAELLIERV 106 (432)
T ss_pred CCeeEEeccCCeEEeCCCCEeeehhccCcccccCC-CCHHHHHHHHHHHHh-cCC------CCCCCHHHHHHHHHHHHhc
Confidence 68999999999999 899999999987 67999 899999999999998 442 2234578899999999999
Q ss_pred CC-CCEEEecccHHHHHhhh---hhhccCCcEEEEcCCchhHHHhHhhhc-------------C------CeEEEecCCC
Q 011567 168 GT-PDSILYSYGLSTMFSAI---PCFCKKGDLIVADEGVHWGIQNGLYLS-------------R------STVVYFKHND 224 (483)
Q Consensus 168 g~-e~~i~~~sG~~a~~~ai---~~~~~~gdiI~~~~~~h~s~~~g~~~s-------------~------~~v~~~~~~d 224 (483)
+. |..-++|||++|+++|+ |++++|.+||.++..||++.-..+.-. | ..+..+++||
T Consensus 107 p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND 186 (432)
T COG0001 107 PSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYND 186 (432)
T ss_pred CcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCC
Confidence 97 77778899999999996 578999999999999998754333211 1 2457889999
Q ss_pred HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCcccccc
Q 011567 225 MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHC 300 (483)
Q Consensus 225 ~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~ 300 (483)
++.+++++++..++ +++|++||+.+|.|.+.| |++|++||++||++||.||+.++++.+. .|.+++|
T Consensus 187 ~~al~~~~~~~g~~-------IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~--gGaq~~~ 257 (432)
T COG0001 187 LEALEEAFEEYGDD-------IAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVAL--GGAQGYY 257 (432)
T ss_pred HHHHHHHHHHcCCc-------EEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCC--ccccccc
Confidence 99999999987654 999999999999999988 8999999999999999999999888764 6788999
Q ss_pred CCCCCceeEEEccccccccCCCce----eeccHHHHHHHHhcCCceeec-CCCcHHHHHHHHHHHHHHhcCcHHHHHHHH
Q 011567 301 GVPVDKIDIVTAAMGHALATEGGF----CTGSARVVDHQRLSSSGYVFS-ASLPPYLASAAITAIDVLEENPDLITKLKK 375 (483)
Q Consensus 301 ~v~~~~~Di~~~s~~K~lg~~GG~----i~~~~~~~~~~~~~~~~~~fs-~~~~p~~~aaa~~al~~l~~~~~~~~~l~~ 375 (483)
|+.| |+. +++|.+| ||+ ..|++++++++...+..|.-+ .+.||++++|+.++++.+.+.+...+++.+
T Consensus 258 gi~P---Dlt--tlGKiIG--GGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~ 330 (432)
T COG0001 258 GVEP---DLT--TLGKIIG--GGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDA 330 (432)
T ss_pred CcCc---chh--hhhhhhc--CCcceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 9999 887 8999998 654 578999999876655333222 257999999999999999876568999999
Q ss_pred HHHHHHHhhccC---CCceeecCCCCCEEEEEecCCCCC-c----hhhHHHHHHHHHHHHHhCCEEEEeecccccccCCC
Q 011567 376 NTAILRTGLSDI---HGLSIASNPESPIVFLILEKSTGS-M----KNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRL 447 (483)
Q Consensus 376 ~~~~l~~~L~~~---~~~~i~~~~~~~i~~l~l~~~~~~-~----~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~ 447 (483)
+++.|++.|++. .+++......+.++.+.+...... . ..+.+...++...+|+ +||++.+..+..
T Consensus 331 ~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~-~GV~l~ps~~ea------ 403 (432)
T COG0001 331 LGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLN-RGVYLAPSQFEA------ 403 (432)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHh-CCcccCCccccc------
Confidence 999999998764 266665555677888877653211 1 1123346667776665 599999876532
Q ss_pred CCceEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 448 PVGIRLFVSAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 448 ~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
..++..||++|||+.+++++++++++..
T Consensus 404 -----~flS~ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 404 -----GFLSTAHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred -----eeeecccCHHHHHHHHHHHHHHHHHhhc
Confidence 5577889999999999999999887653
No 20
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=100.00 E-value=8.3e-42 Score=344.04 Aligned_cols=340 Identities=23% Similarity=0.331 Sum_probs=280.7
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhc-------CCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHH
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKY-------GVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLST 181 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~-------g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a 181 (483)
.+++||+|+||||+..+|++.+++.+++++| |.|++|+|.++|+.+.+.++|++||+++|.++++++++|+.|
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~l~~~sG~~a 83 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEAFIVPSGYMA 83 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeEEEECChHHH
Confidence 3689999999999999999999999999999 699999999999999999999999999999999999999999
Q ss_pred HHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCc
Q 011567 182 MFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQI 261 (483)
Q Consensus 182 ~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i 261 (483)
+...+..+.+++|+|+.+..+|.+++.+++........++|+|+++|++.++..... +.++++|+++++++++|.+
T Consensus 84 ~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~----~~~~~~v~v~~v~s~~G~i 159 (370)
T PRK05937 84 NLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRHNDLDHLESLLESCRQR----SFGRIFIFVCSVYSFKGTL 159 (370)
T ss_pred HHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHhhhcc----CCCcEEEEEecCCCCCCCc
Confidence 988888888899999999999999999998766666778999999999999764321 1236788899999999999
Q ss_pred cChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCCceeeccHHHHHHHHhcCCc
Q 011567 262 APLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSG 341 (483)
Q Consensus 262 ~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~~~~~~~~~~~~~ 341 (483)
.|+++|.++|++||+++++||+|+.|.+|.+|+|+...++.. +.++++.|++|++|+.|+.+++.+++.+.+.....+
T Consensus 160 ~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~--~~~~~~~tlsK~~g~~G~~vl~~~~~~~~~~~~~~~ 237 (370)
T PRK05937 160 APLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYE--NFYAVLVTYSKALGSMGAALLSSSEVKQDLMLNSPP 237 (370)
T ss_pred cCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCC--CCcEEEEechhhhhcCceEEEcCHHHHHHHHHhCCC
Confidence 999999999999999999999999999999998877666653 234556799999998888788888877776655668
Q ss_pred eeecCCCcHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHH
Q 011567 342 YVFSASLPPYLASAAITAIDVLEEN-PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLE 420 (483)
Q Consensus 342 ~~fs~~~~p~~~aaa~~al~~l~~~-~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~ 420 (483)
+.|+++.+|..++++.++++.+.+. ...+++++++.+++++.|... + .+++..+.++.. ...
T Consensus 238 ~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~-~-------~~~~~~i~~~~~---------~~~ 300 (370)
T PRK05937 238 LRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSA-A-------PGCVQPIFLPGI---------SEQ 300 (370)
T ss_pred CeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCC-C-------CCCEEEEEeCCh---------hHH
Confidence 8898888888888888999988654 346788888889998887542 1 123344555321 123
Q ss_pred HHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 421 DIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 421 ~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
.+.+. |.++||++....++. .+.||++++..+|++||++++++|+++++++
T Consensus 301 ~~~~~-L~~~gi~v~~~~~~~------~~~iRis~~~~~t~edid~l~~~L~~~~~~~ 351 (370)
T PRK05937 301 ELYSK-LVETGIRVGVVCFPT------GPFLRVNLHAFNTEDEVDILVSVLATYLEKY 351 (370)
T ss_pred HHHHH-HHHCCeeEEeeCCCC------CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 45554 556699987654432 2459999999999999999999999998765
No 21
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=1.4e-41 Score=344.98 Aligned_cols=365 Identities=31% Similarity=0.496 Sum_probs=303.1
Q ss_pred ccCCCccccCCCCeEEECCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC
Q 011567 90 RCEPPVLESAAGPHTIISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT 169 (483)
Q Consensus 90 ~~~~~~i~~~~g~~~~~~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~ 169 (483)
+...+++++++|.+++.+|++||||.+++++|+.++|++++++.+++++|+.+.+.++.++|..+...++++.++++++.
T Consensus 20 ~~~~~~~~~~~g~~~~~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~ 99 (385)
T PRK05958 20 YRSLRPREGGAGRWLVVDGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGA 99 (385)
T ss_pred CccccccccCCCceeEeCCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC
Confidence 34568899999999999999999999998889878899999999999999887777777788888999999999999998
Q ss_pred CCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEE
Q 011567 170 PDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYI 249 (483)
Q Consensus 170 e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~i 249 (483)
++.+++++|++++..++++++++||.|+++.++|.++..++.+.+.+++.++.+|++++++.++.... +++++
T Consensus 100 ~~~i~~~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~-------~~~lv 172 (385)
T PRK05958 100 ERALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPHNDVDALEALLAKWRA-------GRALI 172 (385)
T ss_pred CcEEEECcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhccC-------CCeEE
Confidence 89999999999998888999999999999999999999999999999999999999999998865321 36788
Q ss_pred EEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCCceeeccH
Q 011567 250 VVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSA 329 (483)
Q Consensus 250 v~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~ 329 (483)
+++++++++|.+.|+++|+++|++||+++|+||+|+.|.++.+|.+...++++...+.+++++|++|++|+.||++++++
T Consensus 173 i~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~Gg~~~~~~ 252 (385)
T PRK05958 173 VTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSGAAVLGSE 252 (385)
T ss_pred EEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCCcEEEcCH
Confidence 99999999999999999999999999999999999988887766665554455433346888999999998899999999
Q ss_pred HHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCC
Q 011567 330 RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKST 409 (483)
Q Consensus 330 ~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~ 409 (483)
++++.++.....+.++.+.+|..++++.++++.++..+++.+++.++.+++.+.|+++ ++++.. +.++++++.+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~-~~~~~~~~~~~~-- 328 (385)
T PRK05958 253 TLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRAL-GFQLMD-SQSAIQPLIVGD-- 328 (385)
T ss_pred HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCC-CCCCEEEEEeCC--
Confidence 9988876555566676777888888888999888655568899999999999999886 676553 467788887732
Q ss_pred CCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 410 GSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 410 ~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
.....++.+.+++ +||.+.+...+..+.. +..+|++++..+|++|+++++++|+++
T Consensus 329 ------~~~~~~~~~~l~~-~gI~v~~~~~~~~~~~--~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 329 ------NERALALAAALQE-QGFWVGAIRPPTVPAG--TSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred ------HHHHHHHHHHHHH-CCceEecccCCCCCCC--CceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 1234467777654 5999987543322111 235999999999999999999999875
No 22
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=2.7e-42 Score=350.33 Aligned_cols=344 Identities=18% Similarity=0.269 Sum_probs=273.0
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhc-CCCCCCCCCcccChHHHHHHHHHHHhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKY-GVGSCGPRGFYGTIDVHLDCEARIAKF 166 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~-g~g~~~~~~~~g~~~~~~~l~~~La~~ 166 (483)
.|.++++++|.++| .||++||||+++ ++||| +||+|.+|+.+++++. ..+. ..+.+.+.+|+++|+++
T Consensus 17 ~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~------~~~~~~~~~la~~L~~~ 89 (397)
T TIGR03246 17 APFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLWHIGN------GYTNEPVLRLAKKLVDA 89 (397)
T ss_pred CCceEEEeecCEEEeCCCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhcccccC------ccCCHHHHHHHHHHHhh
Confidence 36778999999999 799999999995 89999 7999999999999984 2221 12467889999999999
Q ss_pred hCCCCEEEecccHHHHHhhhhhh---------ccCCcEEEEcCCchhHHHhHhhhcCC------------eEEEecCCCH
Q 011567 167 LGTPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHNDM 225 (483)
Q Consensus 167 ~g~e~~i~~~sG~~a~~~ai~~~---------~~~gdiI~~~~~~h~s~~~g~~~s~~------------~v~~~~~~d~ 225 (483)
++.+.+++++||++|++.|++.. ++|.++|.++..||+++..++.+++. .+..++|||+
T Consensus 90 ~~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 169 (397)
T TIGR03246 90 TFADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDL 169 (397)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCH
Confidence 98888899999999999998865 36788999999999998877776653 3457889999
Q ss_pred HHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCccc-ccc
Q 011567 226 DSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EHC 300 (483)
Q Consensus 226 ~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~~ 300 (483)
+++++.+.+ ++++|++||+++++|.+.| |++|+++|++||+++|+||+|++ +|++|+++. +++
T Consensus 170 ~~l~~~l~~----------~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG--~Gr~G~~~a~~~~ 237 (397)
T TIGR03246 170 AAAKALISD----------KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTG--VGRTGELYAYMHY 237 (397)
T ss_pred HHHHHHhcc----------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhc--CCccccchhhhhc
Confidence 999988842 3789999999999887653 99999999999999999999954 488888754 788
Q ss_pred CCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Q 011567 301 GVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTA 378 (483)
Q Consensus 301 ~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~ 378 (483)
++.| |++ |++|++|. +.|++++++++++.++...++.+|+ .+|+.++++.++|+.+++ +++.++++++++
T Consensus 238 gv~p---Di~--t~~K~lggG~pigav~~~~~i~~~~~~~~~~~t~~--~~p~~~aaa~a~l~~~~~-~~l~~~~~~~~~ 309 (397)
T TIGR03246 238 GVTP---DIL--TSAKALGGGFPIGAMLTTTEIAAHLKVGTHGTTYG--GNPLACAVAGKVLDLVNT-PELLAGVKQRHD 309 (397)
T ss_pred CCCC---CEE--EeehhhhCCcceeEEEEcHHHHHhccCCCcCCCCC--CCHHHHHHHHHHHHHHhh-ccHHHHHHHHHH
Confidence 9877 887 89999971 1145666999999886554555554 588999999999998865 458999999999
Q ss_pred HHHHhhccCC-Cceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEc
Q 011567 379 ILRTGLSDIH-GLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFV 455 (483)
Q Consensus 379 ~l~~~L~~~~-~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~ 455 (483)
++++.|+++. .+.+. ..+.+.++.+.+.+. .......++..+++ +|+++.+.. ++.||++|
T Consensus 310 ~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~------~~~~~~~~~~~l~~-~Gv~~~~~g---------~~~lR~~p 373 (397)
T TIGR03246 310 LFVDGLEKINARYNVFSEIRGKGLLIGAVLTEA------YQGKAKQFVNAAAE-EGVIALIAG---------PNVVRFAP 373 (397)
T ss_pred HHHHHHHHHHhcCCCeEeeecCceEEEEEEcCc------hhhHHHHHHHHHHH-CCeEEeecC---------CCEEEEeC
Confidence 9999998752 12222 233566777776431 11234567777665 599987532 13499999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHH
Q 011567 456 SAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 456 ~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
++.+|++||++++++|++++.++
T Consensus 374 ~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 374 SLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998764
No 23
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=3e-42 Score=356.00 Aligned_cols=358 Identities=17% Similarity=0.201 Sum_probs=270.0
Q ss_pred cCCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q 011567 91 CEPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKF 166 (483)
Q Consensus 91 ~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~ 166 (483)
+.|+++++++|.|+| +|||+||||.++ +++|| +||+|.+|+.+++++++..+. ...++++.+.+|+++|++.
T Consensus 70 ~~p~~i~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh-~hp~v~~Av~~ql~~~~~~~~---~~~~~~~~~~~lae~L~~~ 145 (504)
T PLN02760 70 LEPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGG-SEPRLVAAATEQLNKLPFYHS---FWNRTTKPSLDLAKELLEM 145 (504)
T ss_pred CCCceEEeeeeeEEEECCCCEEEEcCcCHHhcccCC-CCHHHHHHHHHHHhhccceec---ccccCcHHHHHHHHHHHhh
Confidence 357889999999999 899999999995 89999 899999999999998654321 1234678899999999998
Q ss_pred hC-C--CCEEEecccHHHHHhhhhhh---------ccCCcEEEEcCCchhHHHhHhhhcCCeEE------------EecC
Q 011567 167 LG-T--PDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRSTVV------------YFKH 222 (483)
Q Consensus 167 ~g-~--e~~i~~~sG~~a~~~ai~~~---------~~~gdiI~~~~~~h~s~~~g~~~s~~~v~------------~~~~ 222 (483)
+. . +.+++++||++|+++|++.. ++|.++|.++..||+++..++.+++.+.. ..+.
T Consensus 146 ~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~ 225 (504)
T PLN02760 146 FTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDC 225 (504)
T ss_pred cCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCC
Confidence 63 2 35677799999999998865 24678999999999999888877764221 1111
Q ss_pred C----------C--------HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEE
Q 011567 223 N----------D--------MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFL 280 (483)
Q Consensus 223 ~----------d--------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~ 280 (483)
+ + .++||+++.+.. +..+++|++||+++++|.+.| |++|+++|++||++||+
T Consensus 226 p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~------~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~ 299 (504)
T PLN02760 226 PHYWRFHLPGETEEEFSTRLADNLENLILKEG------PETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIA 299 (504)
T ss_pred CcccccCCCCCcHHHHHHHHHHHHHHHHHhcC------CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEe
Confidence 0 1 134565554221 235899999999999999988 99999999999999999
Q ss_pred eCccc-cccccCCCCccccccCCCCCceeEEEccccccccC---CCceeeccHHHHHHHHhc-------CCceeecCCCc
Q 011567 281 DESNS-FGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLS-------SSGYVFSASLP 349 (483)
Q Consensus 281 DEa~s-~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~---~GG~i~~~~~~~~~~~~~-------~~~~~fs~~~~ 349 (483)
||+++ +|++|. .+.++++|+.| ||+ +++|++|. +.|.+++++++++.+... .++++|+ .|
T Consensus 300 DEV~TGfGRtG~--~~a~e~~gv~P---Div--tlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~--gn 370 (504)
T PLN02760 300 DEVICAFGRLGT--MFGCDKYNIKP---DLV--SLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYS--GH 370 (504)
T ss_pred cchhhCCcccch--hhHHHhcCCCC---cEE--EecccccCCccccceEeecHHHHhhhhcccccccCcccCCCCC--CC
Confidence 99995 555553 23358899988 887 79999972 234467889999987532 2444555 48
Q ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCc---hhhHHHHHHHHH
Q 011567 350 PYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSM---KNDLQLLEDIAD 424 (483)
Q Consensus 350 p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~--~~~~~i~~l~l~~~~~~~---~~~~~~~~~i~~ 424 (483)
|+.|++++++|++++++ ++.+++++++++|++.|+++...++.. ...+.++.+.+.++.... ..+......+..
T Consensus 371 Pl~~Aaala~Le~i~~~-~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~ 449 (504)
T PLN02760 371 PVSCAVALEALKIYKER-NIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGA 449 (504)
T ss_pred HHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHH
Confidence 99999999999999875 589999999999999998763333222 345678888875432211 112334566777
Q ss_pred HHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 425 WALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 425 ~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
.+++ +||++.+.. ..+|++|++.+|++|||++++++++++.++.
T Consensus 450 ~~~~-~Gvl~~~~g----------~~lrl~Ppl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 450 ECKK-RGMLVRVAG----------DNIMMSPPLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred HHHh-CCcEEEecC----------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7665 599987532 2389999999999999999999999987763
No 24
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=1.1e-41 Score=349.93 Aligned_cols=358 Identities=18% Similarity=0.201 Sum_probs=266.5
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| .|||+||||.++ ..+|| +||+|.+|+++++++++.++ +.+.++++.+.+|+++|++++
T Consensus 36 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~hp~v~~A~~~q~~~~~~~~---~~~~~~~~~~~~lae~L~~~~ 111 (460)
T PRK12403 36 GPRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGY-GRKDLAAAAARQMEQLPYYN---MFFHTTHPAVIELSELLFSLL 111 (460)
T ss_pred CCceEEeceeeEEEeCCCCEEEECchhHHhhcCCC-CCHHHHHHHHHHHHhCCCee---cccccCCHHHHHHHHHHHHhC
Confidence 46789999999999 899999999887 56999 89999999999999976532 223456788999999999999
Q ss_pred C--CCCEEEecccHHHHHhhhhhhc------c-CC--cEEEEcCCchhHHHhHhhhcCCe-----------EEEecCC--
Q 011567 168 G--TPDSILYSYGLSTMFSAIPCFC------K-KG--DLIVADEGVHWGIQNGLYLSRST-----------VVYFKHN-- 223 (483)
Q Consensus 168 g--~e~~i~~~sG~~a~~~ai~~~~------~-~g--diI~~~~~~h~s~~~g~~~s~~~-----------v~~~~~~-- 223 (483)
+ .+.+++++||++|+++|++... + ++ .+|.....||+++..++.+++.. +..++..
T Consensus 112 p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~ 191 (460)
T PRK12403 112 PGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYW 191 (460)
T ss_pred CCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcc
Confidence 7 4678888999999999987653 3 22 34456788999999888877643 1112111
Q ss_pred -----C----------HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCcc
Q 011567 224 -----D----------MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESN 284 (483)
Q Consensus 224 -----d----------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~ 284 (483)
+ +++|++.+.+.. +..+++|++||+++++|.+.| |++|+++|++||++||+||++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~le~~~~~~~------~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~ 265 (460)
T PRK12403 192 YANGGELTPAEFGRRAALQLEEKILELG------AENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVI 265 (460)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHHhC------CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 1 244555443322 125899999999999999887 999999999999999999999
Q ss_pred ccccccCCCCccc-cccCCCCCceeEEEcccccccc----CCCceeeccHHHHHHHHhcCCceee--cCCCcHHHHHHHH
Q 011567 285 SFGVLGRSGRGLT-EHCGVPVDKIDIVTAAMGHALA----TEGGFCTGSARVVDHQRLSSSGYVF--SASLPPYLASAAI 357 (483)
Q Consensus 285 s~g~lg~~G~g~~-~~~~v~~~~~Di~~~s~~K~lg----~~GG~i~~~~~~~~~~~~~~~~~~f--s~~~~p~~~aaa~ 357 (483)
++ +|++|+++. +++|+.| ||+ +++|++| +.|| +++++++++.+......+.+ +.+.||+.|++++
T Consensus 266 tG--fGRtG~~~a~e~~gv~P---Div--~~gK~lggG~~Piga-~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaal 337 (460)
T PRK12403 266 GG--FGRTGEWFAHEHFGFEP---DTL--SIAKGLTSGYVPMGG-LVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAI 337 (460)
T ss_pred cC--CCcCchhhhhhhcCCCC---CeE--EEcccccccccceEE-EEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHH
Confidence 74 678888766 8999988 898 6999998 2223 45788898887643322222 3347999999999
Q ss_pred HHHHHHhcCcHHHHHHH-HHHHHHHHhhccC-CCceee--cCCCCCEEEEEecCCCCCch---hhHHHHHHHHHHHHHhC
Q 011567 358 TAIDVLEENPDLITKLK-KNTAILRTGLSDI-HGLSIA--SNPESPIVFLILEKSTGSMK---NDLQLLEDIADWALKED 430 (483)
Q Consensus 358 ~al~~l~~~~~~~~~l~-~~~~~l~~~L~~~-~~~~i~--~~~~~~i~~l~l~~~~~~~~---~~~~~~~~i~~~~l~~~ 430 (483)
++|+++++++ +.++++ ++.++|++.|+++ ..+++. ....+.++.+.+..+..... ........+...+++ +
T Consensus 338 a~L~~i~~~~-l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 415 (460)
T PRK12403 338 ANLKALRDEG-VVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFE-E 415 (460)
T ss_pred HHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHh-C
Confidence 9999998754 889996 8999999988754 123322 23567788888853321111 111234445565565 5
Q ss_pred CEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 431 GVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 431 Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
|+++.+.. ..+|++|+..+|++|++++++++++++.++.
T Consensus 416 Gll~~~~~----------~~~~l~Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 416 GVIIRSTL----------GRMIMAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred CEEEEecC----------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99997431 2289999999999999999999999998874
No 25
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=5.5e-41 Score=337.34 Aligned_cols=358 Identities=32% Similarity=0.549 Sum_probs=299.1
Q ss_pred cccCCCCeEEECCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEe
Q 011567 96 LESAAGPHTIISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILY 175 (483)
Q Consensus 96 i~~~~g~~~~~~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~ 175 (483)
+++++|.++..+|+++|||++++++|+..+|++.+++.+++++|+.+.++++..+|..+...++++.++++++.++.+++
T Consensus 3 ~~~~~~~~~~~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~ 82 (360)
T TIGR00858 3 LDRGPGPEVVRDGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEAALLF 82 (360)
T ss_pred cccCCCCeEEECCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCCEEEE
Confidence 57889999999999999999999999878899999999999998887777777788888899999999999999999999
Q ss_pred cccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEeccc
Q 011567 176 SYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVY 255 (483)
Q Consensus 176 ~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~ 255 (483)
++|++++..++++++++||.|+++.++|.+...++...+.+++.++..|+++|++.+++.... ++++|++++++
T Consensus 83 ~~G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~------~~~~v~~~~~~ 156 (360)
T TIGR00858 83 SSGYLANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRHNDVEHLERLLEKNRGE------RRKLIVTDGVF 156 (360)
T ss_pred CchHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecCCCHHHHHHHHHHcccC------CCeEEEEeCCc
Confidence 999999888888899999999999999999999999999999888889999999988653211 36899999999
Q ss_pred CCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCCceeeccHHHHHHH
Q 011567 256 QNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQ 335 (483)
Q Consensus 256 ~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~~~~~~~ 335 (483)
+++|.+.|+++|+++|++||+++|+||+|+.|.++..+.+...++++.+++.||+++|++|++|+.|||+++++++++.+
T Consensus 157 ~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~gG~~~~~~~~~~~~ 236 (360)
T TIGR00858 157 SMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYGAYVAGSQALIDYL 236 (360)
T ss_pred cCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccCcEEEcCHHHHHHH
Confidence 99999999999999999999999999999988877666666667777667789999999999999899999999998887
Q ss_pred HhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 011567 336 RLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 415 (483)
Q Consensus 336 ~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~ 415 (483)
......+.++++.++..++++.++++.+...++..++++++.+++.+.|+++ ++.+. ++.++++++.++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~-------- 306 (360)
T TIGR00858 237 INRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEAL-GFTLM-PSCTPIVPVIIGD-------- 306 (360)
T ss_pred HHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-CCccC-CCCCCEEEEEeCC--------
Confidence 6555555666666788888888899877665568899999999999999886 66655 3467888888742
Q ss_pred HHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHH
Q 011567 416 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 472 (483)
Q Consensus 416 ~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 472 (483)
.....++++.+++ +||++.+...+.... .+..+|++++..+|++|+++++++|+
T Consensus 307 ~~~~~~~~~~l~~-~gI~v~~~~~~~~~~--~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 307 NASALALAEELQQ-QGIFVGAIRPPTVPA--GTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred HHHHHHHHHHHHH-CCeeEeeeCCCCCCC--CCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 1124467776654 599998765432211 12359999999999999999998874
No 26
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=1.7e-41 Score=334.40 Aligned_cols=355 Identities=19% Similarity=0.278 Sum_probs=274.6
Q ss_pred CCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC
Q 011567 93 PPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (483)
Q Consensus 93 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g 168 (483)
|.+|++++|.|++ .|||+|||..|+ +.+|| ++|+|.+|+.+|+++...-. + ...+..+..+|+++|+++.+
T Consensus 27 ~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh-~~~~i~~Ai~~Q~~~l~~~~--~--~~~t~~Pa~~LA~~L~~~aP 101 (449)
T COG0161 27 PRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGH-GRPEIAEAIKKQLDKLPHVM--F--GGFTHEPAIELAEKLAELAP 101 (449)
T ss_pred ceeeeecceeEEEeCCCCEEEecccHHHHhhcCc-CCHHHHHHHHHHHHhCCchh--h--cccCCchHHHHHHHHHHhCC
Confidence 7889999999999 799999999998 88999 89999999999999843311 1 12234559999999999998
Q ss_pred ---CCCEEEecccHHHHHhhhhhhc---------cCCcEEEEcCCchhHHHhHhhhcCCe-E------------EEe--c
Q 011567 169 ---TPDSILYSYGLSTMFSAIPCFC---------KKGDLIVADEGVHWGIQNGLYLSRST-V------------VYF--K 221 (483)
Q Consensus 169 ---~e~~i~~~sG~~a~~~ai~~~~---------~~gdiI~~~~~~h~s~~~g~~~s~~~-v------------~~~--~ 221 (483)
.+.+++.+||++|++.|++... +|..+|....+||+.+..++++.+.. . ... +
T Consensus 102 ~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P 181 (449)
T COG0161 102 EGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAP 181 (449)
T ss_pred CCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCC
Confidence 4566666999999999987532 34458889999999999888877621 1 011 1
Q ss_pred C----C-----C------HHHHHHHHHHhhhhhhhccCccEEEEEecccCC-CCCccC----hHHHHHHHHHcCcEEEEe
Q 011567 222 H----N-----D------MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQN-SGQIAP----LDELIRLKEKYRFRVFLD 281 (483)
Q Consensus 222 ~----~-----d------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~-~G~i~~----L~~l~~l~~k~~~~li~D 281 (483)
+ + + .+.||+++.++.+ .+++++|+||+.+. +|.+.| |++++++|+|||++||+|
T Consensus 182 ~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~------~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~D 255 (449)
T COG0161 182 YAYRRGFFGEGDEEFAEAADELEALILEHGP------ETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIAD 255 (449)
T ss_pred cccccCCCCCChHHHHHHHHHHHHHHHhcCc------ccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEee
Confidence 1 1 1 3456666666553 36999999999888 777776 999999999999999999
Q ss_pred CccccccccCCCCcc-ccccCCCCCceeEEEccccccccCCCce-----eeccHHHHHHHHhc-----CCceeecCCCcH
Q 011567 282 ESNSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALATEGGF-----CTGSARVVDHQRLS-----SSGYVFSASLPP 350 (483)
Q Consensus 282 Ea~s~g~lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~~GG~-----i~~~~~~~~~~~~~-----~~~~~fs~~~~p 350 (483)
|+.++ +||||..+ ++|+|+.| ||+ +++|+++ ||| ++.++++.+.+... .++++|++ ||
T Consensus 256 EV~tG--FGRTG~~FA~e~~gi~P---Di~--~~aKGLT--~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsg--hP 324 (449)
T COG0161 256 EVATG--FGRTGKMFACEHAGIVP---DIL--CLAKGLT--GGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSG--NP 324 (449)
T ss_pred cceeC--CCcCchhhhhhhcCCCC---Cee--eeccccc--ccchhhHhHhhhHHHHHHHhcccCCeeccCCcccc--CH
Confidence 99875 67778766 59999999 898 7999998 666 35678888776543 46666665 99
Q ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhcc-CCCceeecC--CCCCEEEEEecCCCCCchh-hHHHHHHHHHHH
Q 011567 351 YLASAAITAIDVLEENPDLITKLKKNTAILRTGLSD-IHGLSIASN--PESPIVFLILEKSTGSMKN-DLQLLEDIADWA 426 (483)
Q Consensus 351 ~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~-~~~~~i~~~--~~~~i~~l~l~~~~~~~~~-~~~~~~~i~~~~ 426 (483)
++||+|+++|+++++++ ++++.++...+|.++|++ +.+.+.+++ ..+.+..+.+..+...... +.+...++.+.+
T Consensus 325 lacAaAla~L~i~e~e~-l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~ 403 (449)
T COG0161 325 LACAAALANLDILEEED-LLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAA 403 (449)
T ss_pred HHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHH
Confidence 99999999999998765 999999999999999987 544444433 4566777777554332211 234455677765
Q ss_pred HHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011567 427 LKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLRD 481 (483)
Q Consensus 427 l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~ 481 (483)
++ +|+++++... .+-++|++.+|++||+++++++++++.+....
T Consensus 404 ~e-~Gl~iRp~g~----------~i~~~PPliit~~eid~l~~~l~~al~~~~~~ 447 (449)
T COG0161 404 LE-RGLLIRPLGD----------VIYLMPPLIITREEIDELVDALREALDETLAD 447 (449)
T ss_pred HH-CCeEEeecCC----------EEEEcCCccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 55 5999998732 27799999999999999999999999887653
No 27
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=4.5e-40 Score=335.29 Aligned_cols=367 Identities=34% Similarity=0.581 Sum_probs=300.8
Q ss_pred CccccCCCCeEE-ECCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCE
Q 011567 94 PVLESAAGPHTI-ISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDS 172 (483)
Q Consensus 94 ~~i~~~~g~~~~-~~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~ 172 (483)
..+++++|.+++ .+|+++|||++++++|+..+|.+.+++.+++++++.+.++++.+.|+.+...++++.+++++|.++.
T Consensus 26 ~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~~~ 105 (397)
T PRK06939 26 RVITSPQGADITVADGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTEDA 105 (397)
T ss_pred ccccCCCCceEEecCCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCCcE
Confidence 457889999999 5999999999999999988999999999999988777777777889999999999999999999899
Q ss_pred EEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEe
Q 011567 173 ILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVE 252 (483)
Q Consensus 173 i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e 252 (483)
+++++|++++..+++++.++||.|++++++|.++..++...+.+++.++++|++++++.+++.... ..++++|+++
T Consensus 106 i~~tsG~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~----~~~~~~v~~~ 181 (397)
T PRK06939 106 ILYSSCFDANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEAKEA----GARHKLIATD 181 (397)
T ss_pred EEEcChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhcc----CCCCeEEEEe
Confidence 999999999999999999999999999999999999999999999889889999999888653211 1136888999
Q ss_pred cccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccc-cCCCceeeccHHH
Q 011567 253 AVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-ATEGGFCTGSARV 331 (483)
Q Consensus 253 ~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~l-g~~GG~i~~~~~~ 331 (483)
++++++|.+.++++|+++|++||+++|+||+|++|.++.+|.+..+.+++. .++|++++|+||++ |..|||+++++++
T Consensus 182 ~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~g~r~G~v~~~~~~ 260 (397)
T PRK06939 182 GVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM-DRVDIITGTLGKALGGASGGYTAGRKEV 260 (397)
T ss_pred cCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC-CCCcEEEEECHHHhCccCceEEEeCHHH
Confidence 999999999999999999999999999999998777766555555556664 35689999999999 6778999999999
Q ss_pred HHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCC
Q 011567 332 VDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGS 411 (483)
Q Consensus 332 ~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~ 411 (483)
++.++.....+.++++.++..++++.++++.+.+..+++++++++.+++.+.|+++ ++++.. +.++++.+.+..
T Consensus 261 ~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~-~~~~~~~~~~~~---- 334 (397)
T PRK06939 261 IDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAA-GFTLGP-GEHPIIPVMLGD---- 334 (397)
T ss_pred HHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCC-CCCCEEEEEECC----
Confidence 99887765566666666777778888888887655578899999999999999876 666543 356666555421
Q ss_pred chhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 412 MKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 412 ~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
.....++++.++++ ||.+.+..++..+.. ...||++++..+|++|+++++++|++++++.
T Consensus 335 ----~~~~~~~~~~L~~~-gI~v~~~~~~~~~~~--~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 335 ----AKLAQEFADRLLEE-GVYVIGFSFPVVPKG--QARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred ----HHHHHHHHHHHHHC-CceEeeeCCCCCCCC--CceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 11245678876665 999886544322111 2459999999999999999999999988764
No 28
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=3.9e-40 Score=335.68 Aligned_cols=360 Identities=22% Similarity=0.376 Sum_probs=276.9
Q ss_pred ccCCCccccCCCCeEE-ECCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcC-CCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 90 RCEPPVLESAAGPHTI-ISGKEVVNFASANYLGLIGHEKLLESCTSALEKYG-VGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 90 ~~~~~~i~~~~g~~~~-~~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g-~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.+.++.+++++|.++| .||++||||++++++|+.+||+|.+|+.++++++| .++++++..+ ..+.+.+++++|++++
T Consensus 26 ~~~~~~~~~~~G~~~~d~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~-~~~~~~~l~~~la~~~ 104 (402)
T PRK07505 26 GLNGLTVGEREGILITLADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRV-RSQILKDLEEALSELF 104 (402)
T ss_pred ccccceeeccCCccEEecCCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhh-hhHHHHHHHHHHHHHh
Confidence 3445778999999999 79999999999999994489999999999999988 4555555433 4678999999999999
Q ss_pred CCCCEEEecccHHHHHhhhhhhc------cCCcEEEEcCCchhHHHh--HhhhcCCeEEEecCCCHHHHHHHHHHhhhhh
Q 011567 168 GTPDSILYSYGLSTMFSAIPCFC------KKGDLIVADEGVHWGIQN--GLYLSRSTVVYFKHNDMDSLRNTLERVTADN 239 (483)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~~~~------~~gdiI~~~~~~h~s~~~--g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~ 239 (483)
|. +++++++|++|+..+++... +++++|+.+..+|+++.. +....+.+++.++++|+++|++.++..
T Consensus 105 ~~-~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~~d~~~l~~~~~~~---- 179 (402)
T PRK07505 105 GA-SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDHNDLDALEDICKTN---- 179 (402)
T ss_pred CC-CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCCCCHHHHHHHHhcC----
Confidence 98 89999999999998886532 466789999999998742 333445788899999999999877431
Q ss_pred hhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cccCCCCCceeEEEccccccc
Q 011567 240 KRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EHCGVPVDKIDIVTAAMGHAL 318 (483)
Q Consensus 240 ~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~~~v~~~~~Di~~~s~~K~l 318 (483)
++.++++||++ ++|.+.|+++|.++|++||++||+||+|+++.+|++|.+.. +++++...+.+++++|++|++
T Consensus 180 -----~~~~vl~~p~~-~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~ 253 (402)
T PRK07505 180 -----KTVAYVADGVY-SMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAF 253 (402)
T ss_pred -----CCEEEEEeccc-ccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhh
Confidence 36788888876 55899999999999999999999999998877888888764 677762134467788999999
Q ss_pred cCCCceee-ccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhccCCCceeecC
Q 011567 319 ATEGGFCT-GSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASN 395 (483)
Q Consensus 319 g~~GG~i~-~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~~~~~~i~~~ 395 (483)
|+.||+++ +++++++.++....+++|+++.++..++++.++++.+.++ .+..++++++.+.+...+... +. .
T Consensus 254 ~~~Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~-g 328 (402)
T PRK07505 254 GASGGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE----QS-G 328 (402)
T ss_pred hccCeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc----CC-C
Confidence 98889976 5788999888878889999888889999999999866533 345566666655544332211 11 2
Q ss_pred CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 396 PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 396 ~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
...++..+.+.+ .....++.+.+++ +||++.+..++.++.. +..|||++++.+|++|+++++++|++++
T Consensus 329 ~~~~i~~~~~~~--------~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~--~~~lRi~~~~~~t~eei~~~~~~l~~~l 397 (402)
T PRK07505 329 SFLPIRLIYIGD--------EDTAIKAAKQLLD-RGFYTSPVFFPVVAKG--RAGLRIMFRASHTNDEIKRLCSLLKEIL 397 (402)
T ss_pred CCCCEEEEEeCC--------HHHHHHHHHHHHH-CCCeEeeecCCCCCCC--CceEEEecCccCCHHHHHHHHHHHHHHH
Confidence 234444444421 1234567777664 5999988765543211 1359999999999999999999999987
Q ss_pred HH
Q 011567 476 AV 477 (483)
Q Consensus 476 ~~ 477 (483)
++
T Consensus 398 ~~ 399 (402)
T PRK07505 398 DE 399 (402)
T ss_pred Hh
Confidence 65
No 29
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-40 Score=341.26 Aligned_cols=358 Identities=18% Similarity=0.264 Sum_probs=272.3
Q ss_pred CCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh-
Q 011567 93 PPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL- 167 (483)
Q Consensus 93 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~- 167 (483)
|.++++++|.++| +|||+||||.++ +.||| +||+|.+|+.+++++++.++.+.. +.+.+.+|+++|++++
T Consensus 26 ~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~q~~~~~~~~~~~~----~~~~~~~la~~L~~~~~ 100 (433)
T PRK08117 26 NLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGH-RHPKVVQAIKEQADKLMHGPSGVI----YYESILKLAEELAEITP 100 (433)
T ss_pred CceEEeeeeeEEEeCCCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhccCcccccc----CCHHHHHHHHHHHHhCC
Confidence 3678999999999 899999999997 68999 899999999999998765432221 4578999999999998
Q ss_pred CCCCEEEe-cccHHHHHhhhhh---hccCCcEEEEcCCchhHHHhHhhhcCCe-------------EEEecC--------
Q 011567 168 GTPDSILY-SYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRST-------------VVYFKH-------- 222 (483)
Q Consensus 168 g~e~~i~~-~sG~~a~~~ai~~---~~~~gdiI~~~~~~h~s~~~g~~~s~~~-------------v~~~~~-------- 222 (483)
+..+.++| +||++|++.|++. +++|.++|.++..||+.+..++.+++.. +..++.
T Consensus 101 ~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (433)
T PRK08117 101 GGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPK 180 (433)
T ss_pred CCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccc
Confidence 43445544 9999999999875 6788899999999999988776554321 111111
Q ss_pred ---------CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccc
Q 011567 223 ---------NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVL 289 (483)
Q Consensus 223 ---------~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~l 289 (483)
+|++++++++++... +..+++|++||+++++|.+.| |++|+++|++||++||+||+|+ | +
T Consensus 181 ~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G-~ 253 (433)
T PRK08117 181 GEDPEVCFLECLRDLESLFKHQVT-----PEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-G-F 253 (433)
T ss_pred cCchhHHHHHHHHHHHHHHHhccC-----CCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-c-c
Confidence 245667776654211 124899999999999999988 9999999999999999999999 4 7
Q ss_pred cCCCCccc-cccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcC
Q 011567 290 GRSGRGLT-EHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEEN 366 (483)
Q Consensus 290 g~~G~g~~-~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~ 366 (483)
|++|+++. +++|+.| |++ |++|++|. +.|++++++++++.+....++++| +.||+.++++.++|+.+++.
T Consensus 254 gr~G~~~~~~~~gv~p---Di~--t~sK~lg~G~pigav~~~~~i~~~~~~~~~~~T~--~~np~~~aaa~a~L~~l~~~ 326 (433)
T PRK08117 254 GRTGEWFAAQTFGVVP---DIM--TIAKGIASGLPLSAVVASKELMEQWPLGSHGTTF--GGNPVACAAALATLEVIKEE 326 (433)
T ss_pred CccccchhHhhcCCCC---CEe--ehhhhccCCCcceeEEEcHHHHhhccCCCCCCCC--CcCHHHHHHHHHHHHHHHhc
Confidence 88888765 7889887 776 89999983 236678899999887654444455 45899999999999999764
Q ss_pred cHHHHHHHHHHHHHHHhhccCC-Ccee--ecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccc
Q 011567 367 PDLITKLKKNTAILRTGLSDIH-GLSI--ASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLD 443 (483)
Q Consensus 367 ~~~~~~l~~~~~~l~~~L~~~~-~~~i--~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~ 443 (483)
+++++++++++++++.|.++. .+++ .....+.++.+.+.++.. ..+......+...+++ +||++.+....
T Consensus 327 -~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~--~~~~~~~~~~~~~l~~-~Gv~~~~~g~~--- 399 (433)
T PRK08117 327 -KLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDG--EPDGDAVEKILDKCLE-KGLLFYLCGNA--- 399 (433)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCC--CcchHHHHHHHHHHHH-CCCEEeecCCC---
Confidence 589999999999999987752 1222 123345677777754321 1122345567776655 59988653211
Q ss_pred cCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 444 KCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 444 ~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
...||++|++.+|++||++++++|+++++++..
T Consensus 400 ----~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~ 432 (433)
T PRK08117 400 ----GNVLRMIPPLTVTKEEIDEGLDILDEALTEYEA 432 (433)
T ss_pred ----CCEEEEeCCccCCHHHHHHHHHHHHHHHHHHhc
Confidence 234999999999999999999999999988754
No 30
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=336.25 Aligned_cols=342 Identities=17% Similarity=0.210 Sum_probs=263.9
Q ss_pred CCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC
Q 011567 93 PPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (483)
Q Consensus 93 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g 168 (483)
|.++++++|.++| .|||+||||+++ +++|| +||+|.+|+.+++++...++ .. ...++..+|+++|++..+
T Consensus 19 ~~~~~~~~G~~~~d~dG~~~lD~~sg~~~~~lGh-~~p~v~~a~~~q~~~~~~~~---~~--~~~~~~~~la~~l~~~~~ 92 (395)
T PRK03715 19 DIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGH-CNPGMVEALAAQAEKLINPS---PA--FYNEPMAKLAGLLTQHSC 92 (395)
T ss_pred CceEEeeecCEEEECCCCEEEECCcChhhccCCC-CCHHHHHHHHHHHHhccccc---cc--ccCHHHHHHHHHHhhccC
Confidence 5678999999999 799999999984 88999 68999999999998854321 11 134667788888887766
Q ss_pred CCCEEEecccHHHHHhhhhhhc--------cCCcEEEEcCCchhHHHhHhhhcCCe------------EEEecCCCHHHH
Q 011567 169 TPDSILYSYGLSTMFSAIPCFC--------KKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHNDMDSL 228 (483)
Q Consensus 169 ~e~~i~~~sG~~a~~~ai~~~~--------~~gdiI~~~~~~h~s~~~g~~~s~~~------------v~~~~~~d~~~L 228 (483)
.+++++++||++|++.|++... +|.++|.++..+|+++..++.+++.. +...+++|++++
T Consensus 93 ~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l 172 (395)
T PRK03715 93 FDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASV 172 (395)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHH
Confidence 7788889999999999987764 56789999999999999988877643 122346788888
Q ss_pred HHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cccCCC
Q 011567 229 RNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EHCGVP 303 (483)
Q Consensus 229 e~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~~~v~ 303 (483)
++.+++ .+++|++||+++++|.+.| +++|+++|++||+++|+||+++ | +|++|+++. +++++.
T Consensus 173 ~~~l~~----------~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G-~GRtG~~~a~~~~gv~ 240 (395)
T PRK03715 173 EKLITD----------KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-G-CGRTGTLFAYELSGIE 240 (395)
T ss_pred HHHcCC----------CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCCCcchhhHhhcCCC
Confidence 877742 3789999999999999887 9999999999999999999999 4 799999875 889998
Q ss_pred CCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Q 011567 304 VDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILR 381 (483)
Q Consensus 304 ~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~ 381 (483)
| ||+ +++|++|. +.|.+++++++... ....++.+| +.+|+.+++++++|+++++ +++.++++++.++|+
T Consensus 241 P---Di~--t~gK~lg~G~p~~av~~~~~i~~~-~~~~~~~T~--~g~pl~~aaala~L~~l~~-~~l~~~~~~~g~~l~ 311 (395)
T PRK03715 241 P---DIM--TLGKGIGGGVPLAALLAKAEVAVF-EAGDQGGTY--NGNPLMTAVGVAVISQLLA-PGFLEGVRARGEYLK 311 (395)
T ss_pred C---cee--eehhhhhCCcceEEEEEccccccc-cCCCcCCCC--CCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHH
Confidence 7 886 79999983 23556777777532 222223344 4589999999999999986 468999999999999
Q ss_pred HhhccCC---CceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCC
Q 011567 382 TGLSDIH---GLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAA 458 (483)
Q Consensus 382 ~~L~~~~---~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~ 458 (483)
+.|+++. ++.-. ...++++.+.+.++ ......+.+.+.+ ++|+++..... +.||++|++.
T Consensus 312 ~~L~~l~~~~~i~~v-rG~Glm~~i~l~~~------~~~~~~~~~~~~~-~~Gi~~~~~~~---------~~lR~~p~l~ 374 (395)
T PRK03715 312 EKLLELSEERGLEGE-RGEGLLRALLLGKD------IGPQIVEKARDMQ-PDGLLLNAPRP---------NLLRFMPALN 374 (395)
T ss_pred HHHHHHhhcCCcCeE-EcceeEEEEEecCc------hHHHHHHHHHhcc-CCCEEEeecCC---------CEEEEeCCcc
Confidence 9997641 33212 34688999988531 1112223333322 23999864422 4499999999
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q 011567 459 HSEADLVKACESLKRISAVV 478 (483)
Q Consensus 459 ~t~edi~~~~~~l~~~~~~~ 478 (483)
+|++||++++++|+++++++
T Consensus 375 ~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 375 VTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred cCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999998764
No 31
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=6.2e-40 Score=335.82 Aligned_cols=354 Identities=16% Similarity=0.187 Sum_probs=272.7
Q ss_pred CCCccccCCC-CeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q 011567 92 EPPVLESAAG-PHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKF 166 (483)
Q Consensus 92 ~~~~i~~~~g-~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~ 166 (483)
.|.++.+++| .|+| .||++||||.++ ..+|| +||+|.+|+.+|+++....+ + +...+...+|+++|++.
T Consensus 63 ~~~~~~~~~G~~~l~D~dG~~ylD~~~g~~~~~lGH-~~p~v~~Ai~~ql~~l~~~~---~--~~~~~~~~~lae~L~~~ 136 (459)
T PRK11522 63 YGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGH-RNPVVVSAVQNQLAKQPLHS---Q--ELLDPLRAMLAKTLAAL 136 (459)
T ss_pred CCeeEEeccCeEEEEECCCCEEEECCcCHHhhhcCC-CCHHHHHHHHHHHhhCcccc---c--ccCCHHHHHHHHHHHHh
Confidence 3578899999 9999 899999999998 67999 89999999999999854322 2 23467889999999998
Q ss_pred hCC--CCEEEecccHHHHHhhhhh---hcc---CCcEEEEcCCchhHHHhHhhhcCCe------------EEEecCCCHH
Q 011567 167 LGT--PDSILYSYGLSTMFSAIPC---FCK---KGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHNDMD 226 (483)
Q Consensus 167 ~g~--e~~i~~~sG~~a~~~ai~~---~~~---~gdiI~~~~~~h~s~~~g~~~s~~~------------v~~~~~~d~~ 226 (483)
++. +.+++.+||++|++.|++. +++ |.++|.+...||+.+...+.+++.. +..++++|.+
T Consensus 137 ~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~ 216 (459)
T PRK11522 137 TPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIE 216 (459)
T ss_pred CCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHH
Confidence 763 4567779999999999764 443 5578999999999887766655422 3456778999
Q ss_pred HHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCcc-ccccC
Q 011567 227 SLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGL-TEHCG 301 (483)
Q Consensus 227 ~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~-~~~~~ 301 (483)
++++.+++... .+..+++|++||+++++|.+.| |++++++|++||+++|+||++++ +|++|+++ ++++|
T Consensus 217 ~l~~~l~~~~~----~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG--~GRtG~~~a~e~~g 290 (459)
T PRK11522 217 AMRTALSECKK----TGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTG--MGRTGKMFACEHEN 290 (459)
T ss_pred HHHHHHHHhhc----cCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceec--CCccchhhhhhccC
Confidence 99998865421 1224899999999999999888 99999999999999999999974 68888874 58999
Q ss_pred CCCCceeEEEccccccccC---CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Q 011567 302 VPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTA 378 (483)
Q Consensus 302 v~~~~~Di~~~s~~K~lg~---~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~ 378 (483)
+.| ||+ +++|++|. +-|.+++++++++.+......+..+.+.||+.|++++++|+.++++ ++.++++++++
T Consensus 291 v~P---Div--t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~-~l~~~~~~~g~ 364 (459)
T PRK11522 291 VQP---DIL--CLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQ-NLPAQAEQKGD 364 (459)
T ss_pred CCC---CEE--EechhhhCCCccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcc-hHHHHHHHHHH
Confidence 988 887 89999982 1233456788888764321112222245999999999999999875 58999999999
Q ss_pred HHHHhhccCC-Cce-e--ecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEE
Q 011567 379 ILRTGLSDIH-GLS-I--ASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLF 454 (483)
Q Consensus 379 ~l~~~L~~~~-~~~-i--~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~ 454 (483)
+|++.|+++. .++ + .....+.++.+.+.++ .....+...+++ +||++.+.... ...||++
T Consensus 365 ~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~--------~~~~~i~~~l~~-~Gvl~~~~~~~-------~~~lr~~ 428 (459)
T PRK11522 365 YLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN--------EIGYNFASEMFR-QRVLVAGTLNN-------AKTIRIE 428 (459)
T ss_pred HHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc--------hHHHHHHHHHHH-CCeEEEecCCC-------CCEEEEE
Confidence 9999998752 232 1 1234678888888532 234567777665 59999754210 2349999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 455 VSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 455 ~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
|++.+|++||++++++++++++++-
T Consensus 429 Ppl~~t~~~id~~l~~l~~~l~~~~ 453 (459)
T PRK11522 429 PPLTLTIEQCEQVLKAARKALAAMR 453 (459)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988754
No 32
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=6.8e-40 Score=333.10 Aligned_cols=375 Identities=17% Similarity=0.226 Sum_probs=279.9
Q ss_pred HHHhhcCCCCCCccccccc--ccCCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCC
Q 011567 71 ELCDEWVPESLIPPIIEEM--RCEPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSC 144 (483)
Q Consensus 71 ~l~~~~~~~~~~~~~~~~~--~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~ 144 (483)
+...++.|-.......... .+.|+++.+++|.++| .||++|||+.++ ..+|| +||+|.+|+.+++++...
T Consensus 12 ~~a~~~~p~g~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~~--- 87 (433)
T PRK00615 12 SEACQYFPGGVNSPVRACRSVGITPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGH-SHPKICDAIQQGAERGTS--- 87 (433)
T ss_pred HHHHhhCCCCcCCCcccccccCCCCceEEEeeeCEEEECCCCEEEEcccchhccccCC-CCHHHHHHHHHHHHhCCC---
Confidence 3344566665543333221 1357889999999999 899999999987 57899 899999999999987321
Q ss_pred CCCCcccChHHHHHHHHHHHhhhCC--CCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHH---HhHhhhcC--
Q 011567 145 GPRGFYGTIDVHLDCEARIAKFLGT--PDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGI---QNGLYLSR-- 214 (483)
Q Consensus 145 ~~~~~~g~~~~~~~l~~~La~~~g~--e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~---~~g~~~s~-- 214 (483)
+..+++...+|.++|++.++. +.+.+++||++|++.|++ .+++|..+|.+..+||+.. ..++.+++
T Consensus 88 ----~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~ 163 (433)
T PRK00615 88 ----YGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETS 163 (433)
T ss_pred ----CCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCC
Confidence 123457789999999999864 466677999999999975 4668888999999999965 43333321
Q ss_pred --------------CeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCc
Q 011567 215 --------------STVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRF 276 (483)
Q Consensus 215 --------------~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~ 276 (483)
.....++|||++++++.+++... ..++|++||++++.|.+.| |++|+++|++||+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~-------~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~ 236 (433)
T PRK00615 164 LDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGH-------RVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGS 236 (433)
T ss_pred cCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCC-------ceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCC
Confidence 12345688999999999875432 4889999999999999888 6799999999999
Q ss_pred EEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceee-cCCCcHHHH
Q 011567 277 RVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVF-SASLPPYLA 353 (483)
Q Consensus 277 ~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~f-s~~~~p~~~ 353 (483)
++|+||++++.+.|. .|..+++|+.| ||+ +|+|++|. ++|++++++++++.++..+..+.+ +.+.||+.|
T Consensus 237 llI~DEv~tG~R~G~--~ga~~~~gv~P---Di~--~~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~ 309 (433)
T PRK00615 237 LSIMDEVVTGFRVAQ--GGAAAIYHVKP---DIT--VYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAM 309 (433)
T ss_pred EEEEEcccccccccH--hHHHHhcCCCC---CeE--EEcccccCCcceeeeeecHHHHhhhcCCCCcccCCCCcccHHHH
Confidence 999999997434442 56678899987 887 69999972 467889999999988643322222 235799999
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccC---CCceeecCCCCCEEEEEecCCCCC-----chhhHHHHHHHHHH
Q 011567 354 SAAITAIDVLEENPDLITKLKKNTAILRTGLSDI---HGLSIASNPESPIVFLILEKSTGS-----MKNDLQLLEDIADW 425 (483)
Q Consensus 354 aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~---~~~~i~~~~~~~i~~l~l~~~~~~-----~~~~~~~~~~i~~~ 425 (483)
++++++|+++++++ ++++++++.++|++.|+++ .++++.....+.++.+.+.+...+ ...+......+...
T Consensus 310 aa~la~L~~i~~~~-~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (433)
T PRK00615 310 AAGKASINLCREQG-FYTQLSTLEQNFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQS 388 (433)
T ss_pred HHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHH
Confidence 99999999998754 7999999999998777653 245443222577888887543211 00123445677777
Q ss_pred HHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 426 ALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 426 ~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
+++ +||++.+..++. ..++..||++|||+++++++++++++++
T Consensus 389 l~~-~Gv~~~~~~~~~-----------~~ls~~ht~~did~~~~a~~~~~~~~~~ 431 (433)
T PRK00615 389 AFS-KGVYLSPSPFEA-----------SFLSSAHSMENLDYAQNVLIDSLEKVFS 431 (433)
T ss_pred HHH-CCeeecCccccc-----------cceecCCCHHHHHHHHHHHHHHHHHHhc
Confidence 665 599998765432 2578889999999999999999998864
No 33
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=1.2e-39 Score=334.69 Aligned_cols=359 Identities=17% Similarity=0.178 Sum_probs=269.2
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.++| .|||+||||.++ ..+|| +||+|.+|+.+++++.+..+..+. .+++...+|+++|++.+
T Consensus 30 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~Ai~~q~~~~~~~~~~~~---~~~~~~~~lae~L~~~~ 105 (460)
T PRK06105 30 GPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGF-SEQRLVEAAARQMKKLPFYHTFSH---KSHGPVIDLAEKLVAMA 105 (460)
T ss_pred CCceEEeeeEEEEEECCCCEEEEcchhHHhccCCC-CCHHHHHHHHHHHHhCCCeecccc---cCCHHHHHHHHHHHHhC
Confidence 47789999999999 899999999987 78999 899999999999998653222111 24678899999999998
Q ss_pred CC--CCEEEecccHHHHHhhhhhh---------ccCCcEEEEcCCchhHHHhHhhhcCCe------------EEEecCCC
Q 011567 168 GT--PDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHND 224 (483)
Q Consensus 168 g~--e~~i~~~sG~~a~~~ai~~~---------~~~gdiI~~~~~~h~s~~~g~~~s~~~------------v~~~~~~d 224 (483)
+. +.+++.+||++|++.|++.. ++|.++|.++..||+.+..++.+++.. +..+++.+
T Consensus 106 p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~ 185 (460)
T PRK06105 106 PVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPH 185 (460)
T ss_pred CCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCc
Confidence 64 45667799999999998763 356778999999999987776655422 11122211
Q ss_pred ------------------HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeC
Q 011567 225 ------------------MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDE 282 (483)
Q Consensus 225 ------------------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DE 282 (483)
.+++|+++.... +..+++|++||+++++|.+.| |++|+++|++||+++|+||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~le~~~~~~~------~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DE 259 (460)
T PRK06105 186 YYRFGLPGESEEAFATRLANELEALILAEG------PDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADE 259 (460)
T ss_pred ccccccCCCChHHHHHHHHHHHHHHHHHcC------CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEec
Confidence 245666664322 125899999999999998877 9999999999999999999
Q ss_pred ccccccccCCCCcc-ccccCCCCCceeEEEccccccccC---CCceeeccHHHHHHHHhcCC-----ceeecCCCcHHHH
Q 011567 283 SNSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSS-----GYVFSASLPPYLA 353 (483)
Q Consensus 283 a~s~g~lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~---~GG~i~~~~~~~~~~~~~~~-----~~~fs~~~~p~~~ 353 (483)
++++ +|++|+++ .+++++.| ||+ +++|++|. +.|.+++++++++.+..... .+.++.+.||+.|
T Consensus 260 v~tG--~GRtG~~f~~~~~~v~P---Di~--~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~ 332 (460)
T PRK06105 260 VICG--FGRTGNMFGCETFGIKP---DIL--VMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAA 332 (460)
T ss_pred cccC--CCcCchhhhHHhcCCCC---Cee--eeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHH
Confidence 9964 45556654 47899988 888 79999973 35667889999988754211 1234446799999
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceee--cCCCCCEEEEEecCCCCCc---hhhHHHHHHHHHHHHH
Q 011567 354 SAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIA--SNPESPIVFLILEKSTGSM---KNDLQLLEDIADWALK 428 (483)
Q Consensus 354 aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~--~~~~~~i~~l~l~~~~~~~---~~~~~~~~~i~~~~l~ 428 (483)
+++.++|++++++ ++.+++++++++|++.|+++..+++. ....+.+..+.+..+.... .........+...+++
T Consensus 333 aaa~a~L~~i~~~-~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~ 411 (460)
T PRK06105 333 AVALENLAIIEER-DLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHE 411 (460)
T ss_pred HHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHH
Confidence 9999999999875 58999999999999999876433322 2345778888774322111 1112234567776654
Q ss_pred hCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 429 EDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 429 ~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
+||++.+.. ..+|++|+..+|++|||+++++++++++++.
T Consensus 412 -~Gvl~~~~g----------~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (460)
T PRK06105 412 -HGVISRAMG----------DTLAFCPPLIITAAQVDEMVDRFGRALDDVA 451 (460)
T ss_pred -CCeEEEecC----------CEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 699997531 2399999999999999999999999998764
No 34
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=9.9e-40 Score=335.33 Aligned_cols=358 Identities=19% Similarity=0.220 Sum_probs=265.8
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|+++++++|.|+| .|||+||||.++ ..+|| +||+|.+|+.+|+++....+ + .+...++...+|.++|++.+
T Consensus 28 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~Ai~~q~~~~~~~~-~--~~~~~~~~~~~lae~L~~~~ 103 (459)
T PRK05965 28 GVTVLASAKGATLTDASGHQLLDAFAGLWCVNVGY-GQESIVEAAAEQMRELPYAT-G--YFHFGSEPAIRLAAKLAERA 103 (459)
T ss_pred CCceEEeeeEeEEEECCCCEEEECcccHHhccCCC-CCHHHHHHHHHHHHhcCCcc-c--ccccCCHHHHHHHHHHHhhC
Confidence 46789999999999 899999999987 68899 89999999999999853311 1 11124577889999999998
Q ss_pred C--CCCEEEecccHHHHHhhhhh---h------ccCCcEEEEcCCchhHHHhHhhhcCCe------------EEEe--cC
Q 011567 168 G--TPDSILYSYGLSTMFSAIPC---F------CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYF--KH 222 (483)
Q Consensus 168 g--~e~~i~~~sG~~a~~~ai~~---~------~~~gdiI~~~~~~h~s~~~g~~~s~~~------------v~~~--~~ 222 (483)
+ .+.+++.+||++|++.|++. + ++|..+|.++.+||+.+..++.+++.. +..+ ++
T Consensus 104 p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~ 183 (459)
T PRK05965 104 PGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPY 183 (459)
T ss_pred CCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCc
Confidence 5 34566669999999999864 3 235678999999999876655554321 1111 11
Q ss_pred -------CCH--------HHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCc
Q 011567 223 -------NDM--------DSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDES 283 (483)
Q Consensus 223 -------~d~--------~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa 283 (483)
+|. +++++.+++.. +.++++|++||+++.+|.+.| |++|+++|++||++||+||+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~------~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV 257 (459)
T PRK05965 184 PYRNPVGDDPQAIIAASVAALRAKVAELG------ADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEV 257 (459)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHHhcC------CCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEech
Confidence 232 45666665432 125899999999999888776 99999999999999999999
Q ss_pred cccccccCCCCcc-ccccCCCCCceeEEEccccccccCCCc-----eeeccHHHHHHHHhc-------CCceeecCCCcH
Q 011567 284 NSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALATEGG-----FCTGSARVVDHQRLS-------SSGYVFSASLPP 350 (483)
Q Consensus 284 ~s~g~lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~~GG-----~i~~~~~~~~~~~~~-------~~~~~fs~~~~p 350 (483)
+++ +|++|.++ .+++|+.| ||+ +++|+++ || .+++++++++.+... .++++| +.||
T Consensus 258 ~tG--fGRtG~~~a~~~~gv~P---Div--~~gKgl~--gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~--~gnp 326 (459)
T PRK05965 258 ITG--FGRTGPLFACEAEGVVP---DLM--TVAKGLT--SGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTY--SAHP 326 (459)
T ss_pred hcc--CccCchhhhHhhcCCCC---CeE--Eechhhc--cCCcceeEEEEcHHHHHHHhccccccccccccCCC--CCCH
Confidence 985 56677655 58999988 898 7999998 55 357889999877532 233344 4699
Q ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCc---hhhHHHHHHHHHH
Q 011567 351 YLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSM---KNDLQLLEDIADW 425 (483)
Q Consensus 351 ~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~--~~~~~i~~l~l~~~~~~~---~~~~~~~~~i~~~ 425 (483)
+.|++++++|++++++ ++.+++++++++|++.|+++..+++.. ...+.++.+.+..+.... ..+......+...
T Consensus 327 l~~Aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~ 405 (459)
T PRK05965 327 VSAAVGLEVLRLYHEG-GLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDR 405 (459)
T ss_pred HHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHH
Confidence 9999999999999875 489999999999999998764333322 345777888774322111 1112345567777
Q ss_pred HHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011567 426 ALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLRD 481 (483)
Q Consensus 426 ~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~ 481 (483)
+++ +|+++.+... ..||++|++.+|++||+++++++++++.++...
T Consensus 406 ~~~-~Gll~~~~g~---------~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~~~ 451 (459)
T PRK05965 406 AYA-NGLVFRAFGD---------GVLGFAPALCCTEGEFDLIFERTRKTLDDVLAD 451 (459)
T ss_pred HHh-CCeEEEecCC---------cEEEEECCCcCCHHHHHHHHHHHHHHHHHHhcC
Confidence 665 5999875321 228999999999999999999999999887543
No 35
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=9.5e-40 Score=332.03 Aligned_cols=337 Identities=20% Similarity=0.246 Sum_probs=267.3
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.++| .|||+||||.++ ..+|| +||+|.+|+.+++++++..+ +.+ +.+.+.+|+++|+++.
T Consensus 22 ~p~~~~~~~G~~l~d~~G~~~lD~~~g~~~~~lGh-~~p~v~~ai~~~~~~~~~~~---~~~--~~~~~~~l~~~l~~~~ 95 (396)
T PRK04073 22 LPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGH-RHPKIIQALKDQADKVTLTS---RAF--HSDQLGPWYEKVAKLT 95 (396)
T ss_pred CCceEEeeeecEEEECCCCEEEEcCCCHHhccCCC-CCHHHHHHHHHHHhhccccc---ccc--CCHHHHHHHHHHHhcC
Confidence 46788999999999 899999999987 57999 89999999999999976532 212 4578899999999999
Q ss_pred CCCCEEEecccHHHHHhhhhhh-----------ccCCcEEEEcCCchhHHHhHhhhcCCe------------EEEecCCC
Q 011567 168 GTPDSILYSYGLSTMFSAIPCF-----------CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHND 224 (483)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~~~-----------~~~gdiI~~~~~~h~s~~~g~~~s~~~------------v~~~~~~d 224 (483)
+.+.+++++||++|++.|++.. +++.++|.++..+|+.+..++.+++.. +..++++|
T Consensus 96 ~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 175 (396)
T PRK04073 96 GKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGD 175 (396)
T ss_pred CCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCC
Confidence 9888899999999999998865 356679999999999988777766532 35678889
Q ss_pred HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cc
Q 011567 225 MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EH 299 (483)
Q Consensus 225 ~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~ 299 (483)
++++++.+.. ++++|++||+++++|.+.| |++|+++|++||+++|+||+|++ +|++|.++. ++
T Consensus 176 ~~~l~~~i~~----------~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g--~g~~g~~~~~~~ 243 (396)
T PRK04073 176 LEALKAAITP----------NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTG--LGRTGKLFACDW 243 (396)
T ss_pred HHHHHHhccc----------CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhC--CCcCcHHHHhhh
Confidence 9888877642 3789999999999999877 89999999999999999999984 577776544 56
Q ss_pred cCCCCCceeEEEccccccccCCC---ceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHH
Q 011567 300 CGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKN 376 (483)
Q Consensus 300 ~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~ 376 (483)
+++.| |++ ++||++|..| |++++++++++.+.......+|+ .||+.++++.++|+.+++. ++.++.+++
T Consensus 244 ~~~~p---di~--~~sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~~t~~--~~~~~~aaa~aaL~~~~~~-~l~~~~~~~ 315 (396)
T PRK04073 244 DNVTP---DMY--ILGKALGGGVFPISCVAANRDILGVFTPGSHGSTFG--GNPLACAVSIAALEVLEEE-KLPERSLEL 315 (396)
T ss_pred cCCCC---CEE--EecccccCCCCcceEEEEcHHHHhhhcCCCCCCCCC--CCHHHHHHHHHHHHHHHhc-CHHHHHHHH
Confidence 77766 777 6899998543 78899999999876544444444 5899999999999988654 478889999
Q ss_pred HHHHHHhhccCCCceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEE
Q 011567 377 TAILRTGLSDIHGLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLF 454 (483)
Q Consensus 377 ~~~l~~~L~~~~~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~ 454 (483)
++++.+.|+++ +.+.. ..+.++++.+.+.. ...++++++++ +||++.+.. +..|||+
T Consensus 316 ~~~l~~~L~~l-~~~~i~~~~~~g~~~~~~~~~----------~~~~~~~~l~~-~Gv~~~~~~---------~~~iRi~ 374 (396)
T PRK04073 316 GEYFKEQLKEI-DNPMIKEVRGRGLFIGVELNE----------PARPYCEALKE-EGLLCKETH---------ETVIRFA 374 (396)
T ss_pred HHHHHHHHHhh-cCCcccceecceEEEEEEecc----------hHHHHHHHHHH-CCeEEecCC---------CCEEEEE
Confidence 99999999876 32211 12356777777631 12456776555 599987531 1349999
Q ss_pred ccCCCCHHHHHHHHHHHHHHH
Q 011567 455 VSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 455 ~~~~~t~edi~~~~~~l~~~~ 475 (483)
|++.+|++|+++++++|++++
T Consensus 375 p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 375 PPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred CCcccCHHHHHHHHHHHHHHh
Confidence 999999999999999998875
No 36
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-39 Score=333.66 Aligned_cols=364 Identities=14% Similarity=0.208 Sum_probs=270.0
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.++| .|||+||||.++ ..+|| +||+|.+|+.+++++....+. .+..++...+|+++|++.+
T Consensus 24 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH-~~p~v~~Ai~~ql~~~~~~~~----~~~~~~~~~~lae~L~~~~ 98 (445)
T PRK08593 24 YPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGH-APPRVVEAIKAQADKFIHYTP----AYMYHEPLVRLAKKLCELA 98 (445)
T ss_pred CCceEEeeeeCEEEeCCCCEEEECCccHHhhcCCC-CCHHHHHHHHHHHHhccCccc----cccCCHHHHHHHHHHHHhC
Confidence 36789999999999 899999999986 56999 899999999999998543211 1224688899999999998
Q ss_pred CC---CCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcCCe-------------EEEecCC-----
Q 011567 168 GT---PDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRST-------------VVYFKHN----- 223 (483)
Q Consensus 168 g~---e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~~~-------------v~~~~~~----- 223 (483)
+. +.+.+.+||++|++.|++ .+++|.++|.++..||+.+..++.+++.. +..++++
T Consensus 99 p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 178 (445)
T PRK08593 99 PGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRG 178 (445)
T ss_pred CCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccc
Confidence 63 345555999999999986 46788899999999999988777665421 2223322
Q ss_pred -----CHHHHHHHHHHhhhhhhh--ccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCC
Q 011567 224 -----DMDSLRNTLERVTADNKR--AKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRS 292 (483)
Q Consensus 224 -----d~~~Le~~l~~~~~~~~~--~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~ 292 (483)
+.+.+++.++.......+ .+..+++|++||+++++|.+.| |++|+++|++||++||+||++++ +|++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg--~Grt 256 (445)
T PRK08593 179 MYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQG--LGRT 256 (445)
T ss_pred cccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhC--CCcC
Confidence 222233222221110000 1125899999999999998876 99999999999999999999964 5677
Q ss_pred CCcc-ccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHH
Q 011567 293 GRGL-TEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDL 369 (483)
Q Consensus 293 G~g~-~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~ 369 (483)
|+++ .+++|+.| |++ +++|++|. ++|++++++++++.+... .+.|+.+.||+.++++.++|+.++++ ++
T Consensus 257 G~~~a~~~~gv~p---Di~--t~gK~l~~G~p~gav~~~~~i~~~~~~~--~~~~T~~~~pl~~aaa~a~l~~l~~~-~l 328 (445)
T PRK08593 257 GKWSSISHFNITP---DLM--SFGKSLAGGMPMSAIVGRKEIMESLEAP--AHLFTTGANPVSCAAALATIDMIEDE-SL 328 (445)
T ss_pred chHHHHHhcCCCC---CEe--eecccccCCcccEEEEEcHHHHhhhccC--CCCCCCCCCHHHHHHHHHHHHHHHhc-cH
Confidence 7764 58899988 887 79999973 357788999999988533 33445567999999999999999875 58
Q ss_pred HHHHHHHHHHHHHhhccCC-Cceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCC
Q 011567 370 ITKLKKNTAILRTGLSDIH-GLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCR 446 (483)
Q Consensus 370 ~~~l~~~~~~l~~~L~~~~-~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~ 446 (483)
.++++++.++|++.|+++. .+++. ....+.++.+.+..+......+......++..+++ +||++.+...
T Consensus 329 ~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~~~------- 400 (445)
T PRK08593 329 LQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFE-HGVVIIAVAG------- 400 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHH-CCeEEeccCC-------
Confidence 9999999999999997642 22222 23456677777643221111233455677877665 5999865321
Q ss_pred CCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 447 LPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 447 ~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
+.||++|++.+|++||++++++++++++++..
T Consensus 401 --~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 401 --NVLRFQPPLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred --CEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 34999999999999999999999999988654
No 37
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=1.2e-39 Score=331.90 Aligned_cols=348 Identities=17% Similarity=0.221 Sum_probs=270.5
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| .||++||||.++ ++||| +||+|.+|+.+++.++.... . ..+++.+.+|+++|++++
T Consensus 21 ~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~--~---~~~~~~~~~la~~l~~~~ 94 (406)
T PRK12381 21 APFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGH-AHPALREALNEQASKFWHTG--N---GYTNEPVLRLAKKLIDAT 94 (406)
T ss_pred CCceEEEeecCEEEeCCCCEEEEcCcCHhhccCCC-CCHHHHHHHHHHHhhccccc--C---ccCCHHHHHHHHHHHhhC
Confidence 35678999999999 899999999995 89999 69999999999998752211 1 124577899999999999
Q ss_pred CCCCEEEecccHHHHHhhhhhh---------ccCCcEEEEcCCchhHHHhHhhhcCC------------eEEEecCCCHH
Q 011567 168 GTPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHNDMD 226 (483)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~~~---------~~~gdiI~~~~~~h~s~~~g~~~s~~------------~v~~~~~~d~~ 226 (483)
+.+.+++++||++|++.|++.. .++.++|.++..||+.+..++.+++. .+..+++||++
T Consensus 95 ~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 174 (406)
T PRK12381 95 FADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLN 174 (406)
T ss_pred CCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHH
Confidence 8888888899999999998764 25677899999999998877776653 24567889999
Q ss_pred HHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cccC
Q 011567 227 SLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EHCG 301 (483)
Q Consensus 227 ~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~~~ 301 (483)
++++.+.+ ++++|++||+++++|.+.| +++|+++|++||++||+||+|++ +|++|.++. ++++
T Consensus 175 ~l~~~l~~----------~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG--~gr~G~~~~~~~~~ 242 (406)
T PRK12381 175 SASALIDD----------QTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTG--VGRTGELYAYMHYG 242 (406)
T ss_pred HHHHhccC----------CeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhC--CCCCcchhhhHhhC
Confidence 99987742 3789999999999886643 89999999999999999999964 477777654 6788
Q ss_pred CCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q 011567 302 VPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAI 379 (483)
Q Consensus 302 v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~ 379 (483)
+.| |++ |++|++|+ +-|++++++++++.+....++.+| +.+|+.++++.++|+.+++ ++++++++++.++
T Consensus 243 v~p---Di~--t~sK~l~gG~~ig~~~~~~~~~~~~~~~~~~~t~--~~~pl~~aaa~a~l~~l~~-~~~~~~~~~~~~~ 314 (406)
T PRK12381 243 VTP---DVL--TTAKALGGGFPIGAMLTTEKCASVMTVGTHGTTY--GGNPLASAVAGKVLELINT-PEMLNGVKQRHDW 314 (406)
T ss_pred CCC---CEE--EehhhhhCCCceEEEEEcHHHHhhcCCCCCCCCC--CCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHH
Confidence 877 775 89999972 125668889999887654444444 4589999999999999865 4589999999999
Q ss_pred HHHhhccCC-Cceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEcc
Q 011567 380 LRTGLSDIH-GLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVS 456 (483)
Q Consensus 380 l~~~L~~~~-~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~ 456 (483)
+++.|+++. .+.+. ....+.++.+.+.++ .......+...++ ++||++.+.. ++.||++|+
T Consensus 315 l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~------~~~~~~~~~~~l~-~~Gv~v~~~g---------~~~lRl~p~ 378 (406)
T PRK12381 315 FVERLNTINARYGLFSEIRGLGLLIGCVLNAE------YAGKAKQISQEAA-KAGVMVLIAG---------PNVVRFAPA 378 (406)
T ss_pred HHHHHHHHHhhCCCEEEEecCeEEEEEEecCc------hhhHHHHHHHHHH-HCCcEEeeCC---------CCEEEEeCC
Confidence 999998752 22222 223466777776431 1123446666655 4699986532 234999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhc
Q 011567 457 AAHSEADLVKACESLKRISAVVLRD 481 (483)
Q Consensus 457 ~~~t~edi~~~~~~l~~~~~~~~~~ 481 (483)
+.+|++||++++++|+++++++..+
T Consensus 379 ~~~t~~~i~~~~~~l~~~l~~~~~~ 403 (406)
T PRK12381 379 LNISEEEITTGLDRFARACERFVSR 403 (406)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999886543
No 38
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=334.68 Aligned_cols=357 Identities=16% Similarity=0.183 Sum_probs=264.0
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| .|||+||||.++ ..+|| +||+|.+|+.+|+++....... ...+++...+|+++|++.+
T Consensus 32 ~p~~i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh-~~p~v~~Av~~q~~~~~~~~~~---~~~~~~~~~~lAe~L~~~~ 107 (461)
T PRK07482 32 PGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGY-GRTEVAEAIAEQAKELAYYHTY---VGHGTEASITLSKRIIDRA 107 (461)
T ss_pred CCeeEEeeeeeEEEECCCCEEEEcccchhhhcCCC-CCHHHHHHHHHHHHhcCccccc---cccCCHHHHHHHHHHHHhC
Confidence 36789999999999 899999999997 68999 8999999999999985321111 1124678899999999988
Q ss_pred C--CCCEEEecccHHHHHhhhhhh---------ccCCcEEEEcCCchhHHHhHhhhcCCe------------EEEe--cC
Q 011567 168 G--TPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYF--KH 222 (483)
Q Consensus 168 g--~e~~i~~~sG~~a~~~ai~~~---------~~~gdiI~~~~~~h~s~~~g~~~s~~~------------v~~~--~~ 222 (483)
+ .+.+++.+||++|++.|++.. ++|..+|.+...||+.+..++.+++.. +..+ ++
T Consensus 108 p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~ 187 (461)
T PRK07482 108 PAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPH 187 (461)
T ss_pred CCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCc
Confidence 5 456777799999999998754 236678889999999876666554421 1111 11
Q ss_pred --C--------------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeC
Q 011567 223 --N--------------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDE 282 (483)
Q Consensus 223 --~--------------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DE 282 (483)
+ +.+.|++.+.... +..+++|++||+++++|.+.| |++|+++|++||++||+||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DE 261 (461)
T PRK07482 188 YYRRADAGMSEEQFSAYCADELEELILAEG------PDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADE 261 (461)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHHhcC------CCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEec
Confidence 1 2355666664321 225899999999999888866 8999999999999999999
Q ss_pred ccccccccCCCCcc-ccccCCCCCceeEEEccccccccCCCce-----eeccHHHHHHHHhc-------CCceeecCCCc
Q 011567 283 SNSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALATEGGF-----CTGSARVVDHQRLS-------SSGYVFSASLP 349 (483)
Q Consensus 283 a~s~g~lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~~GG~-----i~~~~~~~~~~~~~-------~~~~~fs~~~~ 349 (483)
++++ +|++|+++ .+++|+.| ||+ +++|+++ ||| +++++++++.+... .++++| +.|
T Consensus 262 V~tG--fGRtG~~~a~~~~gv~P---Div--~~gKgl~--gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~--~gn 330 (461)
T PRK07482 262 VVTG--FGRLGSMFGSDHYGIEP---DLI--TVAKGLT--SAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTY--SGH 330 (461)
T ss_pred cccC--CCcCcchhhHHhcCCCC---CEE--EEccccc--cCccccceeeecHHHHHHHhcccccCCccccCCCC--CcC
Confidence 9985 56677665 58999998 898 6999997 443 46788888877532 133344 469
Q ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccC-CCcee--ecCCCCCEEEEEecCCCCC---chhhHHHHHHHH
Q 011567 350 PYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDI-HGLSI--ASNPESPIVFLILEKSTGS---MKNDLQLLEDIA 423 (483)
Q Consensus 350 p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~-~~~~i--~~~~~~~i~~l~l~~~~~~---~~~~~~~~~~i~ 423 (483)
|+.|+++.++|+.++++ ++.++++++.++|++.|+++ ..+++ .....+.++.+.+..+... .+.......+++
T Consensus 331 pl~~Aaa~a~L~~~~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~ 409 (461)
T PRK07482 331 PICAAAALANLDILERE-NLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVS 409 (461)
T ss_pred HHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHH
Confidence 99999999999999875 48999999999999999754 12222 2235677888888532211 111122356777
Q ss_pred HHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 424 DWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 424 ~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
..+++ +|+++.+... ...+|+.|++.+|++||++++++++++++++.
T Consensus 410 ~~~~~-~Gvl~~~~~~--------~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~ 456 (461)
T PRK07482 410 AAALE-RGVIARAMPH--------GDILGFAPPLVLTRAEADEIVAIAKDAVDEVL 456 (461)
T ss_pred HHHHH-CCcEEecCCC--------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 77765 5998854211 13499999999999999999999999998764
No 39
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=1.3e-39 Score=331.15 Aligned_cols=349 Identities=16% Similarity=0.168 Sum_probs=266.7
Q ss_pred CCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC
Q 011567 93 PPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (483)
Q Consensus 93 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g 168 (483)
++++.++.|.|+| .||++||||.++ ..+|| +||+|.+|+.+|+++....+ + +..++...+++++|++.++
T Consensus 58 ~~~~~~~~g~~l~D~dG~~ylD~~~g~~~~~lGh-~hp~v~~Av~~ql~~l~~~~---~--~~~~~~~~~lAe~L~~~~p 131 (442)
T TIGR03372 58 AVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGH-RNPNVIAAVENQLAKQPLHS---Q--ELLDPLRALLAKTLAALTP 131 (442)
T ss_pred eeEEEeCCeeEEEECCCCEEEECCccHHhhhcCC-CCHHHHHHHHHHHHhCCCcc---c--ccCCHHHHHHHHHHHHhCC
Confidence 3445777889999 899999999987 67899 89999999999999864321 1 2346788999999999986
Q ss_pred C--CCEEEecccHHHHHhhhhh---hc---cCCcEEEEcCCchhHHHhHhhhcCC------------eEEEecCCCHHHH
Q 011567 169 T--PDSILYSYGLSTMFSAIPC---FC---KKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHNDMDSL 228 (483)
Q Consensus 169 ~--e~~i~~~sG~~a~~~ai~~---~~---~~gdiI~~~~~~h~s~~~g~~~s~~------------~v~~~~~~d~~~L 228 (483)
. +.+++++||++|++.|++. ++ ++.++|.++..||+.+...+.+++. .+..++++|.+.+
T Consensus 132 ~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~ 211 (442)
T TIGR03372 132 GKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAM 211 (442)
T ss_pred CCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHH
Confidence 4 3456669999999999764 33 5667899999999988777766442 2355677899888
Q ss_pred HHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCcc-ccccCCC
Q 011567 229 RNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGL-TEHCGVP 303 (483)
Q Consensus 229 e~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~-~~~~~v~ 303 (483)
++.+++... .+..+++|++||+++++|.+.| |++++++|++||+++|+||++++ +|++|+++ .+++|+.
T Consensus 212 ~~~l~~~~~----~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG--~GRtG~~~a~e~~gv~ 285 (442)
T TIGR03372 212 LKALNECKK----TGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTG--MGRTGKMFACEHEGVQ 285 (442)
T ss_pred HHHHHHHhc----CCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccC--CCccccchhhhhcCCC
Confidence 888865321 1235899999999999999888 99999999999999999999974 68888875 5889998
Q ss_pred CCceeEEEccccccccC---CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Q 011567 304 VDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAIL 380 (483)
Q Consensus 304 ~~~~Di~~~s~~K~lg~---~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l 380 (483)
| ||+ +|+|++|. +.|.+++++++++.+......+..+.+.||+.|++++++|+.+++++ +.++.++++++|
T Consensus 286 P---Div--t~gK~lg~G~~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~-l~~~~~~~G~~l 359 (442)
T TIGR03372 286 P---DIL--CLAKALGGGVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKN-LPAQAAIKGDFL 359 (442)
T ss_pred C---Cee--eehhhhcCCcccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHH
Confidence 8 887 69999982 23445678899888742211121222459999999999999998754 889999999999
Q ss_pred HHhhccCC-Cce---eecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEcc
Q 011567 381 RTGLSDIH-GLS---IASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVS 456 (483)
Q Consensus 381 ~~~L~~~~-~~~---i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~ 456 (483)
++.|+++. .++ ......+.++.+.+.++ .....++..+++ +||++....+. +..|||+|+
T Consensus 360 ~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~--------~~~~~i~~~l~~-~Gvl~~~~~~~-------~~~lr~~Pp 423 (442)
T TIGR03372 360 LDGFQQLAAEYPDLIIEARGKGLLMAIEFRDN--------EIGYAFAKELFQ-QNILVAGTLNN-------AKSIRIEPP 423 (442)
T ss_pred HHHHHHHHHhCCCceEEEecceEEEEEEeCCh--------HHHHHHHHHHHH-CCcEEeecCCC-------CCEEEEECC
Confidence 99987652 122 11235688888888432 234567777665 59999754321 134999999
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 011567 457 AAHSEADLVKACESLKRIS 475 (483)
Q Consensus 457 ~~~t~edi~~~~~~l~~~~ 475 (483)
..+|++|+|++++++++++
T Consensus 424 l~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 424 LTITIEQCALVIKAAKDAL 442 (442)
T ss_pred cccCHHHHHHHHHHHHHhC
Confidence 9999999999999998763
No 40
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-40 Score=305.74 Aligned_cols=365 Identities=24% Similarity=0.323 Sum_probs=294.9
Q ss_pred CCCHHHHHHHHhhcCCCCCCcccccccccCCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHh
Q 011567 63 PLTKKEIDELCDEWVPESLIPPIIEEMRCEPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEK 138 (483)
Q Consensus 63 ~l~~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~ 138 (483)
.++.+++.++-.++....++|- |.++++++|.++| ..||+|+||.+. -.-|| +||.|.+++.+|.++
T Consensus 20 ~~aS~~~~~~E~k~~ahnyhpL--------pvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGh-chpki~~aLqeq~~k 90 (427)
T KOG1402|consen 20 TTASQQIMERENKYGAHNYHPL--------PVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGH-CHPKIIKALQEQADK 90 (427)
T ss_pred ccchhhhhchhhhcccccCCcC--------ceEEEecCCcEEECCCccchhhhhhhhhhcccCC-CCHHHHHHHHHHHhH
Confidence 6777777777777776666643 6779999999999 899999999986 45688 899999999999998
Q ss_pred cCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhc------c-----CCcEEEEcCCchhHHH
Q 011567 139 YGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFC------K-----KGDLIVADEGVHWGIQ 207 (483)
Q Consensus 139 ~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~------~-----~gdiI~~~~~~h~s~~ 207 (483)
... .+|.|| .++..++++.+++++|.+..+-+++|.+|+++|++... | +..++.+...+|+.+.
T Consensus 91 Ltl---ssrafY--nd~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~ 165 (427)
T KOG1402|consen 91 LTL---SSRAFY--NDVLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTL 165 (427)
T ss_pred hhh---hhHHHh--hhhHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCcee
Confidence 543 455665 47889999999999999999999999999999976543 1 2346677888998888
Q ss_pred hHhhhcCCe-------------EEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHH
Q 011567 208 NGLYLSRST-------------VVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRL 270 (483)
Q Consensus 208 ~g~~~s~~~-------------v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l 270 (483)
.++.+++.. +..++++|.++|+..|++ . ..+.+++||+++..|.+.| |++.++|
T Consensus 166 ~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~--~-------~vaaFivEPIQGEaGVvvP~~GYL~~vreL 236 (427)
T KOG1402|consen 166 GAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALKS--P-------NVAAFIVEPIQGEAGVVVPPPGYLKKVREL 236 (427)
T ss_pred eeEEecCCcchhhccCCCCCCcceeeccCCHHHHHHHhcC--C-------CeeEEEeeccccccceEeCCchhHHHHHHH
Confidence 777766533 567788999999999976 2 4889999999999999988 9999999
Q ss_pred HHHcCcEEEEeCccccccccCCCCccc-cccCCCCCceeEEEccccccccCCCce-----eeccHHHHHHHHhcCCceee
Q 011567 271 KEKYRFRVFLDESNSFGVLGRSGRGLT-EHCGVPVDKIDIVTAAMGHALATEGGF-----CTGSARVVDHQRLSSSGYVF 344 (483)
Q Consensus 271 ~~k~~~~li~DEa~s~g~lg~~G~g~~-~~~~v~~~~~Di~~~s~~K~lg~~GG~-----i~~~~~~~~~~~~~~~~~~f 344 (483)
|.||++++|.||+|++ +|+||+.++ +|-++.| |++ -++|+|+ ||+ ++++++++..+....++.+|
T Consensus 237 Ctkynvl~I~DEvQTG--l~RTGk~la~d~env~P---Div--ilgKalS--GG~~Pvsavl~~~~im~~~~pgeHgsTy 307 (427)
T KOG1402|consen 237 CTKYNVLLIADEVQTG--LARTGKLLACDYENVRP---DIV--ILGKALS--GGVYPVSAVLADDDIMLNIKPGEHGSTY 307 (427)
T ss_pred HHhhcEEEEehhhhhc--ccccCcEEEeehhhcCC---CeE--EEecccc--CCeeeeEEEEecHHHHhccCCCcccccc
Confidence 9999999999999997 899999876 8888888 888 4999998 776 47889999998888888888
Q ss_pred cCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCC-Cc---eeecCCCCCEEEEEecCCCCCchhhHHHHH
Q 011567 345 SASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIH-GL---SIASNPESPIVFLILEKSTGSMKNDLQLLE 420 (483)
Q Consensus 345 s~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~-~~---~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~ 420 (483)
++ ||+.|+++.++|+++.++ ++.++...++..|+.+|.+++ .+ --...+.+.+..+.+..... ....+.
T Consensus 308 gg--NpLg~~vaiAalevi~ee-kL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~----~~~~aw 380 (427)
T KOG1402|consen 308 GG--NPLGCAVAIAALEVIVEE-KLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKT----SGQDAW 380 (427)
T ss_pred CC--ChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccc----cchhHH
Confidence 76 899999999999999885 599999999999999998874 22 11123466677777643221 223455
Q ss_pred HHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 421 DIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 421 ~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
+++-. ++++|++..+... .-||+.|+..++++|+++.+++|.+++.
T Consensus 381 ~~cl~-lk~~g~LAkptH~---------~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 381 DVCLA-LKENGLLAKPTHG---------NIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred HHHHc-ccccccccCCCCC---------CeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 66653 5667888766432 2299999999999999999999998763
No 41
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=1.6e-39 Score=332.88 Aligned_cols=375 Identities=18% Similarity=0.227 Sum_probs=273.5
Q ss_pred HHHHHHhhcCCCCCCccccccc--ccCCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCC
Q 011567 68 EIDELCDEWVPESLIPPIIEEM--RCEPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGV 141 (483)
Q Consensus 68 e~~~l~~~~~~~~~~~~~~~~~--~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~ 141 (483)
++.+...+..|-.......... .+.|.++++++|.|+| +||++||||.++ ..+|| +||+|.+++.+++++...
T Consensus 55 ~l~~ra~~~~pgGv~~~~r~~~~~~~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh-~~p~v~~av~~ql~~~~~ 133 (474)
T PLN02482 55 EIFKAAKELMPGGVNSPVRAFKSVGGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGH-ADDEVLAALAETMKKGTS 133 (474)
T ss_pred HHHHHHHhhCCCCCCCcchhhcccCCCCeeEEEeeeCEEEECCCCEEEEecccccccccCC-CCHHHHHHHHHHHhhCCC
Confidence 3444444555555432222111 1347789999999999 899999999986 67999 899999999999997421
Q ss_pred CCCCCCCcccChHHHHHHHHHHHhhhC-CCCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHh--Hhh----
Q 011567 142 GSCGPRGFYGTIDVHLDCEARIAKFLG-TPDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQN--GLY---- 211 (483)
Q Consensus 142 g~~~~~~~~g~~~~~~~l~~~La~~~g-~e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~--g~~---- 211 (483)
+....+...+|.++|++.++ .+.+.+++||++|++.|++ ++++|.++|.+...||+.... ...
T Consensus 134 -------~~~~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~ 206 (474)
T PLN02482 134 -------FGAPCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGV 206 (474)
T ss_pred -------CCCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCc
Confidence 22245778899999999886 4566677999999999975 567898999999999985421 110
Q ss_pred -------hcC------CeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHc
Q 011567 212 -------LSR------STVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKY 274 (483)
Q Consensus 212 -------~s~------~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~ 274 (483)
..+ ..+..+++||+++|++.+++... .+++|++||+++++|.+.| |++|+++|++|
T Consensus 207 ~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~-------~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~ 279 (474)
T PLN02482 207 ATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKG-------EIAAVILEPVVGNSGFIVPKKEFLEGLREITKEN 279 (474)
T ss_pred cccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCC-------ceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHc
Confidence 001 13567899999999999875433 4899999999999999887 78999999999
Q ss_pred CcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCcee-ecCCCcHH
Q 011567 275 RFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYV-FSASLPPY 351 (483)
Q Consensus 275 ~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~-fs~~~~p~ 351 (483)
|++||+||++++.+.|. .|..+++|+.| |++ +|+|++|. +-|.+++++++++.+...+..+. .+.+.+|+
T Consensus 280 g~lLI~DEV~tGfR~g~--~ga~~~~gv~P---Di~--t~gK~lggG~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl 352 (474)
T PLN02482 280 GALLVFDEVMTGFRIAY--GGAQEYFGITP---DLT--TLGKVIGGGLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPL 352 (474)
T ss_pred CCEEEEeccccCeecCc--chHhHHhCCCC---CEE--EecchhhCCCceEEEEEcHHHHHhhccCCCcccccCcchhHH
Confidence 99999999997554442 45568899987 886 79999982 11334789999998864322222 12246899
Q ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCC---CceeecCCCCCEEEEEecCCCC-----CchhhHHHHHHHH
Q 011567 352 LASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIH---GLSIASNPESPIVFLILEKSTG-----SMKNDLQLLEDIA 423 (483)
Q Consensus 352 ~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~---~~~i~~~~~~~i~~l~l~~~~~-----~~~~~~~~~~~i~ 423 (483)
.+++++++|+++++. ++++++.++.++|+++|.++. ++++.......++.+.+..+.. ....+......+.
T Consensus 353 ~~aAala~L~~l~~~-~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~ 431 (474)
T PLN02482 353 AMTAGIHTLKRLQQP-GTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFH 431 (474)
T ss_pred HHHHHHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHH
Confidence 999999999999764 589999999999999997751 3444322234477776643210 0111333456777
Q ss_pred HHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 424 DWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 424 ~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
..|++ +||++.+..++. + .+++.||++|||++++++++++++
T Consensus 432 ~~l~~-~Gv~~~~~~~~~----------~-~psl~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 432 RGMLE-EGVYLAPSQFEA----------G-FTSLAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred HHHHH-CCeEEeccCCCC----------C-cCCCCCCHHHHHHHHHHHHHHHHh
Confidence 77765 599998754421 1 378999999999999999999865
No 42
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.3e-39 Score=331.78 Aligned_cols=351 Identities=15% Similarity=0.190 Sum_probs=266.3
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.++| .||++||||.++ ..+|| +||+|.+|+.+|+++...... ...+++...+|.++|++.+
T Consensus 36 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~ql~~~~~~~~----~~~~~~~~~~lAe~L~~~~ 110 (453)
T PRK06943 36 PLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGH-ANPRINAALKDQLDTLEHAML----AGCTHEPAIELAERLAALT 110 (453)
T ss_pred CCceEEecccCEEEeCCCCEEEEcchHHHHhcCCC-CCHHHHHHHHHHHHhcCCccc----cccCCHHHHHHHHHHHHhC
Confidence 46789999999999 899999999997 67999 899999999999998643221 1124578889999999998
Q ss_pred CC--CCEEEecccHHHHHhhhhhh---------ccCCcEEEEcCCchhHHHhHhhhcCCe------------EEEecCC-
Q 011567 168 GT--PDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHN- 223 (483)
Q Consensus 168 g~--e~~i~~~sG~~a~~~ai~~~---------~~~gdiI~~~~~~h~s~~~g~~~s~~~------------v~~~~~~- 223 (483)
+. +.+++.+||++|++.|++.. ++|..+|.+...||+.+..++.+++.. +..++..
T Consensus 111 p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~ 190 (453)
T PRK06943 111 GGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPD 190 (453)
T ss_pred CCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCC
Confidence 74 45667799999999998764 346779999999999887766665422 1112211
Q ss_pred ----------------CHHHHHHHHHHhhhhhhhccCccEEEEEecc-cCCCCCccC----hHHHHHHHHHcCcEEEEeC
Q 011567 224 ----------------DMDSLRNTLERVTADNKRAKKLRRYIVVEAV-YQNSGQIAP----LDELIRLKEKYRFRVFLDE 282 (483)
Q Consensus 224 ----------------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v-~~~~G~i~~----L~~l~~l~~k~~~~li~DE 282 (483)
|+++++++++... ..+++|++||+ ++++|.+.| |++|+++|++||++||+||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-------~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DE 263 (453)
T PRK06943 191 ARGARPGETAADVAARALADVRRLFAERA-------GKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADE 263 (453)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHhCC-------CceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeec
Confidence 2355666665322 25999999994 888888766 9999999999999999999
Q ss_pred ccccccccCCCCccc-cccCCCCCceeEEEccccccccCCCc-----eeeccHHHHHHHHhc------CCceeecCCCcH
Q 011567 283 SNSFGVLGRSGRGLT-EHCGVPVDKIDIVTAAMGHALATEGG-----FCTGSARVVDHQRLS------SSGYVFSASLPP 350 (483)
Q Consensus 283 a~s~g~lg~~G~g~~-~~~~v~~~~~Di~~~s~~K~lg~~GG-----~i~~~~~~~~~~~~~------~~~~~fs~~~~p 350 (483)
++++ +|++|+++. +++|+.| ||+ +++|+++ || .+++++++++.+... .++.+| +.||
T Consensus 264 V~TG--~GRtG~~fa~~~~gv~P---Div--t~gKgl~--gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~--~gnp 332 (453)
T PRK06943 264 IAVG--CGRTGTFFACEQAGVWP---DFL--CLSKGIS--GGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSY--TGNP 332 (453)
T ss_pred hhhC--CCCCcchhHHHhCCCCC---CeE--eeehhhc--cCcccceEEEEcHHHHHhhcccCccCCccCCCCC--CCCH
Confidence 9975 577776654 8899998 898 7999998 44 357889998877532 123333 4599
Q ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHH
Q 011567 351 YLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALK 428 (483)
Q Consensus 351 ~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~ 428 (483)
+.|++++++|+++++++ +.++++++.++|++.|+++...+.. ....+.++.+.+..+. +.......++...+++
T Consensus 333 l~~aaa~a~L~~i~~~~-l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gvel~~~~---~~~~~~~~~i~~~~~~ 408 (453)
T PRK06943 333 LACRAALATLDLFAEDD-VLARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFDVALDG---DAARTFSRRFFEAALE 408 (453)
T ss_pred HHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHhcCCCEEeEeccccEEEEEEccCC---CcchHHHHHHHHHHHH
Confidence 99999999999998754 8999999999999999775322221 2346778888875321 1122335567777665
Q ss_pred hCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 429 EDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 429 ~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
+||++.+.. ..+|++|+..+|++|||+++++++++++++..
T Consensus 409 -~Gll~~~~g----------~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 449 (453)
T PRK06943 409 -RELLLRPIG----------TTVYLMPPYVLDDDEIAWLAERTRATLDATLA 449 (453)
T ss_pred -CCcEEEecC----------CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 599986532 22899999999999999999999999988753
No 43
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-39 Score=331.66 Aligned_cols=355 Identities=17% Similarity=0.229 Sum_probs=267.2
Q ss_pred cCCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q 011567 91 CEPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKF 166 (483)
Q Consensus 91 ~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~ 166 (483)
+.|.++++++|.|+| +|||+||||.++ ..+|| +||+|.+|+.+++++..... + ...++...+|.++|+++
T Consensus 34 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~~~~~~~--~---~~~~~~~~~lae~L~~~ 107 (451)
T PRK06062 34 INPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGH-QHPKVVAAIQEQAARLCTVA--P---AHANDARSEAARLIAER 107 (451)
T ss_pred CCCceEEeceeeEEEECCCCEEEEcccCHHhhcCCC-CCHHHHHHHHHHHHhcCCcC--C---ccCCHHHHHHHHHHHHh
Confidence 357889999999999 899999999997 67999 89999999999999853211 1 12467889999999999
Q ss_pred hC--CCCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcCCeE-----------EEe--c------C
Q 011567 167 LG--TPDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRSTV-----------VYF--K------H 222 (483)
Q Consensus 167 ~g--~e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v-----------~~~--~------~ 222 (483)
++ .+.+++.+||++|++.|++ .+++|..+|.+...||+.+..++.+++... ..+ + .
T Consensus 108 ~p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 187 (451)
T PRK06062 108 APGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEF 187 (451)
T ss_pred CCCCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCcccccc
Confidence 86 3566677999999999975 467888899999999999877776654211 111 1 1
Q ss_pred ---CC-------HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCcccccc
Q 011567 223 ---ND-------MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGV 288 (483)
Q Consensus 223 ---~d-------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~ 288 (483)
+| +++|+++++... +.++++|++||+++++|.+.| |++|+++|++||++||+||++++
T Consensus 188 ~~~~~~~~~~~~~~~le~~l~~~~------~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tG-- 259 (451)
T PRK06062 188 HATTEEEECERALAHLERVIELEG------PSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAG-- 259 (451)
T ss_pred CCCChHHHHHHHHHHHHHHHHhcC------CCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccC--
Confidence 23 456666664321 125899999999999999988 99999999999999999999985
Q ss_pred ccCCCCcc-ccccCCCCCceeEEEccccccccC---CCceeeccHHHHHHHHhc--CCceeecCCCcHHHHHHHHHHHHH
Q 011567 289 LGRSGRGL-TEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLS--SSGYVFSASLPPYLASAAITAIDV 362 (483)
Q Consensus 289 lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~---~GG~i~~~~~~~~~~~~~--~~~~~fs~~~~p~~~aaa~~al~~ 362 (483)
+|++|+++ .+++|+.| ||+ +++|++|. +-|.+++++++++.+... .++++|+ .+|+.|++++++|++
T Consensus 260 fGRtG~~~a~~~~gv~P---Di~--t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~--gnpl~~Aaa~a~L~~ 332 (451)
T PRK06062 260 FGRTGKWFAIEHFGVVP---DLI--TFAKGVNSGYVPLGGVAISEAIAATFADRPYPGGLTYS--GHPLACAAAVATINA 332 (451)
T ss_pred CCcCcHHHHHHhcCCCC---Cee--eechhhhcCCcCcEEEEEcHHHHHHhccCCCCCCCCCC--CCHHHHHHHHHHHHH
Confidence 68888775 58999988 887 79999982 123456778899988643 2444554 489999999999999
Q ss_pred HhcCcHHHHHHHHHH-HHHHHhhccCC-Ccee--ecCCCCCEEEEEecCCCCCc------hhhHHHHHHHHHHHHHhCCE
Q 011567 363 LEENPDLITKLKKNT-AILRTGLSDIH-GLSI--ASNPESPIVFLILEKSTGSM------KNDLQLLEDIADWALKEDGV 432 (483)
Q Consensus 363 l~~~~~~~~~l~~~~-~~l~~~L~~~~-~~~i--~~~~~~~i~~l~l~~~~~~~------~~~~~~~~~i~~~~l~~~Gv 432 (483)
+++++ +.+++++++ +++++.|+++. .+++ .....+.++.+.+..+.... .........+...+++ +||
T Consensus 333 l~~~~-l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv 410 (451)
T PRK06062 333 MEEEG-IVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKE-RGL 410 (451)
T ss_pred HHhcC-HHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHH-CCc
Confidence 98765 889999998 58888887652 2222 12345778888875321110 0012235567776665 599
Q ss_pred EEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 433 FVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 433 ~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
++.+.. ..+|++|++.+|++|||+++++++++++++
T Consensus 411 l~~~~~----------~~lrl~ppl~~t~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 411 LPFVNG----------NRIHVVPPCTVTEDEVREGLAILDAALAVA 446 (451)
T ss_pred EEeecC----------CEEEEECCccCCHHHHHHHHHHHHHHHHHh
Confidence 976421 339999999999999999999999999765
No 44
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=4e-39 Score=330.92 Aligned_cols=384 Identities=18% Similarity=0.204 Sum_probs=278.4
Q ss_pred CCCCCCHHHHHHHHhhcCCCCCCcccccccccCCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHH
Q 011567 60 PKRPLTKKEIDELCDEWVPESLIPPIIEEMRCEPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSA 135 (483)
Q Consensus 60 ~~~~l~~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~ 135 (483)
.+..++.+++.+.-++..+.|+... .......|.++++++|.|+| .|||+||||.++ ..+|| +||+|.+|+.+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q 84 (460)
T PRK06916 7 DKPSYTYEELSEKNKAYVWHPFTQM-KDYLEEDPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGH-QVPELDEAIREQ 84 (460)
T ss_pred CCCCCChHHHHHHHhhccccccccc-cccccCCCeeEEeccccEEEeCCCCEEEEcchhHHHhhcCC-CCHHHHHHHHHH
Confidence 3446777776655444333232211 11111347889999999999 899999999986 57899 899999999999
Q ss_pred HHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC--CCEEEecccHHHHHhhhhhh---------ccCCcEEEEcCCchh
Q 011567 136 LEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT--PDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHW 204 (483)
Q Consensus 136 l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~--e~~i~~~sG~~a~~~ai~~~---------~~~gdiI~~~~~~h~ 204 (483)
+++....+. +..+++...+|+++|+++++. +.+++.+||++|++.|++.. ++|..+|.+...||+
T Consensus 85 l~~l~~~~~----~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG 160 (460)
T PRK06916 85 LNKIAHSTL----LGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHG 160 (460)
T ss_pred HHhCCCccc----cccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCc
Confidence 998543221 122457789999999999864 46667799999999998643 346679999999999
Q ss_pred HHHhHhhhcCCe------------EEEecCC-----------------CHHHHHHHHHHhhhhhhhccCccEEEEEec-c
Q 011567 205 GIQNGLYLSRST------------VVYFKHN-----------------DMDSLRNTLERVTADNKRAKKLRRYIVVEA-V 254 (483)
Q Consensus 205 s~~~g~~~s~~~------------v~~~~~~-----------------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~-v 254 (483)
.+..++.+++.. +..++.. +.+.+++.++... ..+++|++|| +
T Consensus 161 ~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-------~~iAAvi~EP~i 233 (460)
T PRK06916 161 DTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKH-------EEIAAIIVEPLV 233 (460)
T ss_pred ccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCC-------CcEEEEEEeccc
Confidence 888777766522 1112111 2344555554322 3589999999 6
Q ss_pred cCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCcc-ccccCCCCCceeEEEccccccccCCCce-----
Q 011567 255 YQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALATEGGF----- 324 (483)
Q Consensus 255 ~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~~GG~----- 324 (483)
++.+|.+.| |++|+++|++||++||+||++++ +|++|.++ .+++|+.| ||+ +++|+++ |||
T Consensus 234 qg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG--~GRtG~~~a~~~~gv~P---Div--~~gK~l~--gG~~Pi~a 304 (460)
T PRK06916 234 QGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATG--FGRTGKMFACEHENVTP---DIM--TAGKGLT--GGYLPIAI 304 (460)
T ss_pred cCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhC--CCcCchhhHHHhcCCCC---Cee--eeehhhh--cCccccce
Confidence 988888765 99999999999999999999975 57777765 48899988 888 7999998 554
Q ss_pred eeccHHHHHHHHhc-------CCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceee--cC
Q 011567 325 CTGSARVVDHQRLS-------SSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIA--SN 395 (483)
Q Consensus 325 i~~~~~~~~~~~~~-------~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~--~~ 395 (483)
+++++++++.+... .++.+| +.||+.|+++.++|+.+++. ++.++++++.++|++.|+++...++. ..
T Consensus 305 v~~~~ei~~~~~~~~~~~~~~~~~~T~--~gnpl~~aaa~a~l~~l~~~-~l~~~~~~~g~~l~~~l~~l~~~~~v~~vr 381 (460)
T PRK06916 305 TVTTDEIYNAFYGDYEEQKTFFHGHSY--TGNPLGCAVALANLELYEKT-NLIEQVARKTEYVATQLEDLFALKHVGDIR 381 (460)
T ss_pred eeecHHHHHHhhccccccCccccCCCC--CCCHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHhhcCCCeEEee
Confidence 57888998876421 123344 45999999999999999875 48999999999999999876433322 23
Q ss_pred CCCCEEEEEecCCCCCc---hhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHH
Q 011567 396 PESPIVFLILEKSTGSM---KNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 472 (483)
Q Consensus 396 ~~~~i~~l~l~~~~~~~---~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 472 (483)
..+.++.+.+..+.... ..+......+...+++ +||++.+.. ..+|+.|++.+|++||++++++++
T Consensus 382 G~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~g----------~~l~~~Ppl~it~~~id~~~~~l~ 450 (460)
T PRK06916 382 QLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRE-LGMLTRPLG----------NTIVFMPPLASTIDELDEMLRILY 450 (460)
T ss_pred cCCceeeEEeecccccccCCCchhhHHHHHHHHHHH-CCeEEEecC----------CEEEEeCCcccCHHHHHHHHHHHH
Confidence 45778888775432211 1122234567777665 599997542 238999999999999999999999
Q ss_pred HHHHHHH
Q 011567 473 RISAVVL 479 (483)
Q Consensus 473 ~~~~~~~ 479 (483)
++++++-
T Consensus 451 ~~l~~~~ 457 (460)
T PRK06916 451 KAISDVT 457 (460)
T ss_pred HHHHhhc
Confidence 9998754
No 45
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=7.5e-39 Score=327.13 Aligned_cols=375 Identities=18% Similarity=0.260 Sum_probs=275.0
Q ss_pred HHHHHHhhcCCCCCCccccccc---ccCCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcC
Q 011567 68 EIDELCDEWVPESLIPPIIEEM---RCEPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYG 140 (483)
Q Consensus 68 e~~~l~~~~~~~~~~~~~~~~~---~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g 140 (483)
+.-+...++.|-+......... .+.|.++++++|.|+| .||++||||.++ ..+|| +||+|.+|+.+|+++..
T Consensus 8 ~~~~~a~~~~p~g~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~ 86 (428)
T PRK12389 8 ALHQEALEHIVGGVNSPSRSYKAVGGGAPVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGH-AHPHITKAITEAAENGV 86 (428)
T ss_pred HHHHHHHhhCCCCCCCccccccccCCCCCeEEEeccCCEEEeCCCCEEEEccccccccccCC-CCHHHHHHHHHHHHhCC
Confidence 4444455566665433222111 1346789999999999 899999999887 56999 89999999999999742
Q ss_pred CCCCCCCCcccChHHHHHHHHHHHhhhC-CCCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcC--
Q 011567 141 VGSCGPRGFYGTIDVHLDCEARIAKFLG-TPDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSR-- 214 (483)
Q Consensus 141 ~g~~~~~~~~g~~~~~~~l~~~La~~~g-~e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~-- 214 (483)
. +..+++...++.++|++.++ .+.+.+.+||++|++.|++ .+++|..+|.+...||+.+...+..++
T Consensus 87 ~-------~~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~ 159 (428)
T PRK12389 87 L-------YGTPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSG 159 (428)
T ss_pred c-------cCCCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCc
Confidence 2 12245778999999999875 4566677999999999975 456888899999999997765554432
Q ss_pred -----------------CeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHH
Q 011567 215 -----------------STVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEK 273 (483)
Q Consensus 215 -----------------~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k 273 (483)
..+..+++||++.+++.+++... .+++|++||+++++|.+.| |++|+++|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~-------~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~ 232 (428)
T PRK12389 160 PSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGD-------EVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHE 232 (428)
T ss_pred ccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCC-------cEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 13456788999999998875433 4899999999999999888 9999999999
Q ss_pred cCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceee-cCCCcH
Q 011567 274 YRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVF-SASLPP 350 (483)
Q Consensus 274 ~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~f-s~~~~p 350 (483)
||++||+||++++++++. .|..+++|+.| ||+ +++|++|. +-|.+++++++++.+...+..+.+ +.+.||
T Consensus 233 ~g~llI~DEV~tG~Rt~~--~~a~~~~gv~P---Div--t~gK~lggG~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnp 305 (428)
T PRK12389 233 AGALVIYDEVITAFRFMY--GGAQDLLGVEP---DLT--ALGKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNP 305 (428)
T ss_pred cCCEEEEEccccccccCc--chhhHHhCCCC---Cee--eechhhcCCCceeEEeEHHHHHhhhccCCCcccccCCccCH
Confidence 999999999998754432 34567899988 887 89999972 113357889999987532222233 225799
Q ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCC---CceeecCCCCCEEEEEecCCCCCc-----hhhHHHHHHH
Q 011567 351 YLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIH---GLSIASNPESPIVFLILEKSTGSM-----KNDLQLLEDI 422 (483)
Q Consensus 351 ~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~---~~~i~~~~~~~i~~l~l~~~~~~~-----~~~~~~~~~i 422 (483)
+.|++++++|+.++++ ++.++++++.++|++.|+++. ++.........++.+.+....... ..+......+
T Consensus 306 l~~Aaala~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 384 (428)
T PRK12389 306 ASMAAGIACLEVLQQE-GVYEKLDRLGAMLEEGILEAAEKHGITITINRLKGALTVYFTDEKVTNYDQAERSDGEAFGKF 384 (428)
T ss_pred HHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCcEEEEEEeCCCCCChhhhcccCHHHHHHH
Confidence 9999999999999875 489999999999999997641 322221112337777764321110 0122345667
Q ss_pred HHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 423 ADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 423 ~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
...+++ +||++.+..++ .+.+++.+|++||+++++++++++++
T Consensus 385 ~~~l~~-~Gv~~~~~~~~-----------~~~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 385 FKLMLN-QGINLAPSKYE-----------AWFLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred HHHHHH-CCcEeecCCCC-----------CeeecCCCCHHHHHHHHHHHHHHHHh
Confidence 776665 59999764322 14578899999999999999999865
No 46
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.1e-38 Score=327.25 Aligned_cols=351 Identities=14% Similarity=0.156 Sum_probs=261.9
Q ss_pred CccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC
Q 011567 94 PVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT 169 (483)
Q Consensus 94 ~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~ 169 (483)
..+++++|.|+| .|||+||||.++ ..+|| +||+|.+|+.+|++++...++. .-+++...+|.++|++.++.
T Consensus 48 ~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~Ai~~q~~~l~~~~~~----~~~~~~~~~lae~L~~~~p~ 122 (472)
T PRK08742 48 VPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGH-AEPRIGAAIAAQAGELEQVMLA----GFTHEPAVQLAEQLLAIAPR 122 (472)
T ss_pred eeEEecccCEEEeCCCCEEEEcCccHHhccCCC-CCHHHHHHHHHHHHhCCCcccc----ccCCHHHHHHHHHHHHhCCC
Confidence 468999999999 899999999997 67999 8999999999999976543221 12357788999999998853
Q ss_pred -------CCEEEecccHHHHHhhhhhh---------ccCCcEEEEcCCchhHHHhHhhhcCCe------------EEEec
Q 011567 170 -------PDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYFK 221 (483)
Q Consensus 170 -------e~~i~~~sG~~a~~~ai~~~---------~~~gdiI~~~~~~h~s~~~g~~~s~~~------------v~~~~ 221 (483)
+.+++.+||++|++.|++.. ++|..+|.+..+||+.+..++.+++.. +..++
T Consensus 123 ~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~ 202 (472)
T PRK08742 123 QDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAP 202 (472)
T ss_pred cccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeC
Confidence 45666799999999998653 346779999999999988777765432 11222
Q ss_pred CCC-----------------HHHHHHHHHHhhhhhhhccCccEEEEEec-ccCCCCCccC----hHHHHHHHHHcCcEEE
Q 011567 222 HND-----------------MDSLRNTLERVTADNKRAKKLRRYIVVEA-VYQNSGQIAP----LDELIRLKEKYRFRVF 279 (483)
Q Consensus 222 ~~d-----------------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~-v~~~~G~i~~----L~~l~~l~~k~~~~li 279 (483)
.++ .+.+++.++.. +..+++|++|| +++.+|.+.| |++++++|++||++||
T Consensus 203 ~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI 275 (472)
T PRK08742 203 SPDAYLAEPGQSAEDYALQAADALQALFEQS-------PGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLI 275 (472)
T ss_pred CCCccccccCCCHHHHHHHHHHHHHHHHHhC-------CCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 221 34445555422 23589999999 5888887665 9999999999999999
Q ss_pred EeCccccccccCCCCcc-ccccCCCCCceeEEEccccccccCCCc-----eeeccHHHHHHHHhc------CCceeecCC
Q 011567 280 LDESNSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALATEGG-----FCTGSARVVDHQRLS------SSGYVFSAS 347 (483)
Q Consensus 280 ~DEa~s~g~lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~~GG-----~i~~~~~~~~~~~~~------~~~~~fs~~ 347 (483)
+||++++ +|++|.++ .+++|+.| ||+ +++|++| || .+++++++++.+... .++.+| +
T Consensus 276 ~DEV~TG--fGRtG~~~a~e~~gv~P---Div--~~gKgl~--gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~--~ 344 (472)
T PRK08742 276 ADEIATG--FGRTGTLFACEQAGVMP---DLL--CLSKGLT--GGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSY--T 344 (472)
T ss_pred EechhhC--CCCCccchHHHhcCCCC---CEE--EEccccc--CCCCCcceeeccHHHHHHhhccCccCccCcCCCC--C
Confidence 9999975 56677655 58899988 898 7999997 44 357788998876421 123334 4
Q ss_pred CcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceee--cCCCCCEEEEEecCCCCCc---hhhHHHHHHH
Q 011567 348 LPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIA--SNPESPIVFLILEKSTGSM---KNDLQLLEDI 422 (483)
Q Consensus 348 ~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~--~~~~~~i~~l~l~~~~~~~---~~~~~~~~~i 422 (483)
.+|+.|+++.++|++++++ ++.++.++++++|++.++.+..+++. ....+.++.+.+..+.... ..+.....++
T Consensus 345 gnpl~~Aaa~a~L~~i~~~-~l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~ 423 (472)
T PRK08742 345 GNPLACAAALATLDIFADD-DVIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHA 423 (472)
T ss_pred ccHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHH
Confidence 5999999999999999875 48899999999998777655333322 2346778888875432211 1122334567
Q ss_pred HHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 423 ADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 423 ~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
...+++ +||++.+.. ..|||.|++.+|++||++++++|+++++++.
T Consensus 424 ~~~~~~-~Gll~~~~g----------~vi~~~PpL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 424 YRAALA-RGVVLRPLG----------DVLYWMPPYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred HHHHHH-CCeEEEecC----------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 777765 599997532 2399999999999999999999999998865
No 47
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=1.5e-39 Score=330.56 Aligned_cols=342 Identities=16% Similarity=0.198 Sum_probs=261.6
Q ss_pred CCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC
Q 011567 93 PPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (483)
Q Consensus 93 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g 168 (483)
|.++++++|.++| .|||+||||.++ +.+|| +||+|.+|+++|+++...... ...+++...+|.++|++.++
T Consensus 26 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~Ai~~q~~~~~~~~~----~~~~~~~~~~la~~L~~~~p 100 (428)
T PRK07986 26 VYPVVSAEGCELILADGRRLVDGMSSWWAAIHGY-NHPQLNAAMKSQIDAMSHVMF----GGITHPPAIELCRKLVAMTP 100 (428)
T ss_pred CeeEEeeeeeEEEeCCCCEEEEcchhHHhhcCCC-CCHHHHHHHHHHHhhcCCccc----cccCCHHHHHHHHHHHhhCC
Confidence 3568999999999 899999999997 68999 899999999999998543211 11245788999999999986
Q ss_pred C--CCEEEecccHHHHHhhhhhh--------ccCCcEEEEcCCchhHHHhHhhhcCCe-------------EEE------
Q 011567 169 T--PDSILYSYGLSTMFSAIPCF--------CKKGDLIVADEGVHWGIQNGLYLSRST-------------VVY------ 219 (483)
Q Consensus 169 ~--e~~i~~~sG~~a~~~ai~~~--------~~~gdiI~~~~~~h~s~~~g~~~s~~~-------------v~~------ 219 (483)
. +.+++.+||++|++.|++.. ++|.++|.+..+||+.+..++.+++.. +..
T Consensus 101 ~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~ 180 (428)
T PRK07986 101 QPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQS 180 (428)
T ss_pred CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCc
Confidence 4 45666699999999998643 346789999999999876666554311 111
Q ss_pred -----ecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecc-cCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccc
Q 011567 220 -----FKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAV-YQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVL 289 (483)
Q Consensus 220 -----~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v-~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~l 289 (483)
+.+||++++++.++.... .+++|++||+ +..+|.+.| |++|+++|++||++||+||++++ +
T Consensus 181 ~~~~~~~~~d~~~l~~~l~~~~~-------~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG--~ 251 (428)
T PRK07986 181 RFDGEWDERDIAPFARLMAAHRH-------EIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATG--F 251 (428)
T ss_pred ccchhhHHHHHHHHHHHHHhCCC-------cEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccC--C
Confidence 124677788887764322 4899999997 566565443 99999999999999999999954 5
Q ss_pred cCCCCcc-ccccCCCCCceeEEEccccccccCCCce-----eeccHHHHHHHHhcC-----CceeecCCCcHHHHHHHHH
Q 011567 290 GRSGRGL-TEHCGVPVDKIDIVTAAMGHALATEGGF-----CTGSARVVDHQRLSS-----SGYVFSASLPPYLASAAIT 358 (483)
Q Consensus 290 g~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~~GG~-----i~~~~~~~~~~~~~~-----~~~~fs~~~~p~~~aaa~~ 358 (483)
|++|+++ .+++|+.| ||+ +++|+++ ||| +++++++++.++... ++.+|+ .||+.|+++.+
T Consensus 252 GrtG~~fa~~~~gv~P---Di~--t~gK~l~--gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~--g~p~~~aaa~a 322 (428)
T PRK07986 252 GRTGKLFACEHAGIAP---DIL--CLGKALT--GGTMTLSATLTTREVAETISNGEAGCFMHGPTFM--GNPLACAVANA 322 (428)
T ss_pred ccCCCeeeecccCCCC---CEE--Eechhhh--CCcccCcchhchHHHHHHhhcCCCCccccCCCCC--cCHHHHHHHHH
Confidence 8888875 48899988 888 6999997 665 367889999886532 344444 58999999999
Q ss_pred HHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEe
Q 011567 359 AIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVT 436 (483)
Q Consensus 359 al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~--~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~ 436 (483)
+|++++++ +++++++++.++|++.|+++..++..+ ...+.++.+.+..+. ....+...+++ +|+++.+
T Consensus 323 ~L~~i~~~-~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~--------~~~~~~~~l~~-~Gl~~~~ 392 (428)
T PRK07986 323 SLSLLESG-DWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRPV--------NMAALQRFFVE-QGVWIRP 392 (428)
T ss_pred HHHHHHhC-CHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCcc--------cHHHHHHHHHH-CCcEEEe
Confidence 99999875 479999999999999998763333222 245778888875331 13356666555 5999875
Q ss_pred ecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 437 SKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 437 ~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
.. ..||++|++.+|++||++++++|++++.+
T Consensus 393 ~g----------~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 393 FG----------KLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred cC----------CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 42 23999999999999999999999999854
No 48
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=5.1e-39 Score=327.02 Aligned_cols=345 Identities=17% Similarity=0.232 Sum_probs=262.6
Q ss_pred CccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC-
Q 011567 94 PVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG- 168 (483)
Q Consensus 94 ~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g- 168 (483)
.++++++|.|+| .||++||||.++ ..+|| +||+|.+|+++|+++...... ..-+++...+|.++|++.++
T Consensus 28 ~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~~~~~----~~~~~~~~~~lae~L~~~~p~ 102 (429)
T PRK06173 28 YPVERADGVMITLKDGRRLIDGMSSWWAALHGY-NHPRLNAAATNQLAKMSHIMF----GGFTHEPAVELAQKLLEILPP 102 (429)
T ss_pred ceEEeceeeEEEcCCCCEEEEccchHHhccCCC-CCHHHHHHHHHHHHhcCCccc----cccCCHHHHHHHHHHHhhCCC
Confidence 358999999999 899999999986 68899 899999999999998643111 11246788999999999985
Q ss_pred -CCCEEEecccHHHHHhhhhhh---------ccCCcEEEEcCCchhHHHhHhhhcCCe-------------EEEecCC--
Q 011567 169 -TPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRST-------------VVYFKHN-- 223 (483)
Q Consensus 169 -~e~~i~~~sG~~a~~~ai~~~---------~~~gdiI~~~~~~h~s~~~g~~~s~~~-------------v~~~~~~-- 223 (483)
.+.+++.+||++|++.|++.. ++|..+|.+...||+.+..++.+++.. +..++..
T Consensus 103 ~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~ 182 (429)
T PRK06173 103 SLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSI 182 (429)
T ss_pred CcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCc
Confidence 456777799999999997653 246678999999999877666554311 1112211
Q ss_pred ---------CHHHHHHHHHHhhhhhhhccCccEEEEEecc-cCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccc
Q 011567 224 ---------DMDSLRNTLERVTADNKRAKKLRRYIVVEAV-YQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVL 289 (483)
Q Consensus 224 ---------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v-~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~l 289 (483)
+.+.|++.++... .++++|++||+ ++.+|.+.| |++|+++|++||++||+||+++ | +
T Consensus 183 ~~~~~~~~~~l~~l~~~i~~~~-------~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~t-G-~ 253 (429)
T PRK06173 183 KFGEEWNDEAIEPLQDLLEQKG-------DEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIAT-G-F 253 (429)
T ss_pred ccchhHHHHHHHHHHHHHHhCC-------CcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhc-C-C
Confidence 2445666665322 25899999997 888887755 9999999999999999999995 4 6
Q ss_pred cCCCCcc-ccccCCCCCceeEEEccccccccCCCce-----eeccHHHHHHHHhc-CCceee--cCCCcHHHHHHHHHHH
Q 011567 290 GRSGRGL-TEHCGVPVDKIDIVTAAMGHALATEGGF-----CTGSARVVDHQRLS-SSGYVF--SASLPPYLASAAITAI 360 (483)
Q Consensus 290 g~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~~GG~-----i~~~~~~~~~~~~~-~~~~~f--s~~~~p~~~aaa~~al 360 (483)
|++|+++ .+++|+.| ||+ +++|+++ ||| +++++++++.+... ...+.+ +.+.||+.|++++++|
T Consensus 254 GrtG~~~a~~~~gv~P---Div--~~gK~l~--gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l 326 (429)
T PRK06173 254 GRTGKLFALEHAGVVP---DIM--CIGKALT--GGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESI 326 (429)
T ss_pred CcCCcchHHHhcCCCC---CEE--Eeehhhh--CCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHH
Confidence 9999986 58899987 888 5999997 665 46788888887532 112222 2246899999999999
Q ss_pred HHHhcCcHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeec
Q 011567 361 DVLEENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSK 438 (483)
Q Consensus 361 ~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~--~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~ 438 (483)
+++++++ ++++++++.++|++.|+++.+++... ...++++.+.+.++. ....+++.+++ +||++.+..
T Consensus 327 ~~i~~~~-~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~--------~~~~i~~~l~e-~Gi~v~~~g 396 (429)
T PRK06173 327 RLLLESP-WQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPV--------NMATLQPRFVE-HGIWVRPFG 396 (429)
T ss_pred HHHHhCC-HHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcc--------cHHHHHHHHHH-CCeEEEecC
Confidence 9998764 79999999999999998653444332 246889999885421 13456776555 599997642
Q ss_pred ccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 439 RSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 439 ~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
..||+.|++.+|++|+++++++|++++.++-
T Consensus 397 ----------~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~ 427 (429)
T PRK06173 397 ----------KLVYIMPPFIISPDELSQLTSGLLRVLKQEY 427 (429)
T ss_pred ----------CEEEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 2399999999999999999999999998764
No 49
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=7.5e-39 Score=328.44 Aligned_cols=360 Identities=14% Similarity=0.163 Sum_probs=261.7
Q ss_pred CCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC
Q 011567 93 PPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (483)
Q Consensus 93 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g 168 (483)
|.++++++|.|+| .||++||||.++ ..+|| +||+|.+|+.+++++....+ . ....+...+|+++|+++++
T Consensus 30 p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~~~~---~--~~~~~~~~~lae~l~~~~~ 103 (451)
T PRK07678 30 TMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGY-GRKELAEAAYEQLKTLSYFP---L--TQSHEPAIKLAEKLNEWLG 103 (451)
T ss_pred CeeEEeeeeeEEEeCCCCEEEEccccHHhhcCCC-CCHHHHHHHHHHHHhcCccc---c--ccCCHHHHHHHHHHHHhCC
Confidence 6789999999999 899999999987 67999 89999999999999854321 1 1234677899999999987
Q ss_pred CCC-EEEecccHHHHHhhhhh---hc------cCCcEEEEcCCchhHHHhHhhhcCCe------------EEEecCC---
Q 011567 169 TPD-SILYSYGLSTMFSAIPC---FC------KKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHN--- 223 (483)
Q Consensus 169 ~e~-~i~~~sG~~a~~~ai~~---~~------~~gdiI~~~~~~h~s~~~g~~~s~~~------------v~~~~~~--- 223 (483)
... +++.+||++|++.|++. ++ +|..+|.+...||+.+..++.+++.. +..++.+
T Consensus 104 ~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (451)
T PRK07678 104 GEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCY 183 (451)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccc
Confidence 654 45559999999999765 33 35678899999999887777655421 1112111
Q ss_pred -----------CH---HHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccc
Q 011567 224 -----------DM---DSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNS 285 (483)
Q Consensus 224 -----------d~---~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s 285 (483)
|. +.++++++.. .+..+++|++||+++++|.+.| |++++++|++||++||+||+++
T Consensus 184 ~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~t 257 (451)
T PRK07678 184 RMPGIESEDIYDLECVKEIDRVMTWE------LSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVIC 257 (451)
T ss_pred cccccCChHHHHHHHHHHHHHHHHhc------CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh
Confidence 11 1244445421 1235999999999999888876 9999999999999999999996
Q ss_pred cccccCCCCc-cccccCCCCCceeEEEccccccccCCCc-----eeeccHHHHHHHHhcCC----ceeecCCCcHHHHHH
Q 011567 286 FGVLGRSGRG-LTEHCGVPVDKIDIVTAAMGHALATEGG-----FCTGSARVVDHQRLSSS----GYVFSASLPPYLASA 355 (483)
Q Consensus 286 ~g~lg~~G~g-~~~~~~v~~~~~Di~~~s~~K~lg~~GG-----~i~~~~~~~~~~~~~~~----~~~fs~~~~p~~~aa 355 (483)
+ +|++|++ ..+++|+.| ||+ +++|++| || .+++++++++.+..... .+..+.+.||+.|++
T Consensus 258 G--fGRtG~~~~~~~~gv~P---Div--t~gK~lg--gG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aa 328 (451)
T PRK07678 258 G--FGRTGKAFGFMNYGVKP---DII--TMAKGIT--SAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACAL 328 (451)
T ss_pred c--CCcCchhHHHHhcCCCC---CEE--Eeecccc--cCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHH
Confidence 5 4566654 357899988 898 7999998 44 35788999988754211 122233569999999
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHhhccC-CCce--eecCCCCCEEEEEecCCCCCc-hhhHHHHHHHHHHHHHhCC
Q 011567 356 AITAIDVLEENPDLITKLKKNTAILRTGLSDI-HGLS--IASNPESPIVFLILEKSTGSM-KNDLQLLEDIADWALKEDG 431 (483)
Q Consensus 356 a~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~-~~~~--i~~~~~~~i~~l~l~~~~~~~-~~~~~~~~~i~~~~l~~~G 431 (483)
+.++|++++++ ++.+++++++++|++.|+++ ..++ ......+.++.+.+..+.... ..+.....+++..+++ +|
T Consensus 329 a~a~l~~l~~~-~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~-~G 406 (451)
T PRK07678 329 ALKNLEIMENE-NLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKE-KG 406 (451)
T ss_pred HHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHH-CC
Confidence 99999999875 48999999999999988643 2222 222356788888885322111 1123456677877665 59
Q ss_pred EEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 432 VFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 432 v~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
|++.+.. +.+... ...||++|+..+|++|||+++++++++++++
T Consensus 407 v~~~~~g-~~v~~~--~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 407 LIIGKNG-DTVAGY--NNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred cEEeecC-ccccCC--CCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 9986532 211100 1349999999999999999999999998754
No 50
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=9.7e-39 Score=325.29 Aligned_cols=344 Identities=23% Similarity=0.296 Sum_probs=269.3
Q ss_pred CCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC
Q 011567 93 PPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (483)
Q Consensus 93 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g 168 (483)
|+++.+++|.+++ .||++||||+|+ ..+|| .||+|.+|+.+++++++.++ +.+ +++.+.+++++|++++|
T Consensus 20 ~~~~~~~~g~~~~~~~g~~~lD~~s~~~~~~~Gh-~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~l~~~l~~~~~ 93 (401)
T TIGR01885 20 PVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGH-CHPKIVKALTEQAQKLTLSS---RAF--YNDVFGEFAEYVTKLFG 93 (401)
T ss_pred CceEEeeecCEEEeCCCCEEEEcccCHhhccCCC-CCHHHHHHHHHHHHhccccc---ccc--CCHHHHHHHHHHHhhcC
Confidence 5677899999999 799999999996 34677 79999999999999876433 222 46889999999999999
Q ss_pred CCCEEEecccHHHHHhhhhhhc-----------cCCcEEEEcCCchhHHHhHhhhcC------------CeEEEecCCCH
Q 011567 169 TPDSILYSYGLSTMFSAIPCFC-----------KKGDLIVADEGVHWGIQNGLYLSR------------STVVYFKHNDM 225 (483)
Q Consensus 169 ~e~~i~~~sG~~a~~~ai~~~~-----------~~gdiI~~~~~~h~s~~~g~~~s~------------~~v~~~~~~d~ 225 (483)
.+.+++++||++|++.|++... ++..++..+..+|+++..++.+++ ..+..++|+|+
T Consensus 94 ~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 173 (401)
T TIGR01885 94 YDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYNNL 173 (401)
T ss_pred CCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCCCH
Confidence 8889999999999999988741 233455667778988888887764 23567899999
Q ss_pred HHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCccc-ccc
Q 011567 226 DSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EHC 300 (483)
Q Consensus 226 ~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~~ 300 (483)
++||+.+++... ..++|++||+++++|.+.| |++|+++|++||+++|+||+|++ +|++|+++. +++
T Consensus 174 ~~le~~l~~~~~-------~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g--~g~~G~~~~~~~~ 244 (401)
T TIGR01885 174 EALEEALEDHGP-------NVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTG--LGRTGKLLCVDHE 244 (401)
T ss_pred HHHHHHHHhcCC-------CEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC--CCccchhhHHhhc
Confidence 999998865432 3789999999999999988 99999999999999999999963 788888764 567
Q ss_pred CCCCCceeEEEccccccccCCC---ceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Q 011567 301 GVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNT 377 (483)
Q Consensus 301 ~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~ 377 (483)
++.| |++ +++|+++..+ |++++++++++.++.....++|+ .+|..++++.++|+.++++ .+.+++++++
T Consensus 245 ~~~~---di~--~~gK~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t~~--~~p~~~~aa~a~L~~i~~~-~l~~~~~~~~ 316 (401)
T TIGR01885 245 NVKP---DIV--LLGKALSGGVYPVSAVLADDDVMLTIKPGEHGSTYG--GNPLACAVAVAALEVLEEE-KLAENAEKLG 316 (401)
T ss_pred CCCC---CEE--EeeccccCCCCCcEEEEEcHHHHhhccCCCCCCCCC--CCHHHHHHHHHHHHHHHhc-cHHHHHHHHH
Confidence 7766 777 5889997321 45788999998886544444554 4799999999999999764 4788999999
Q ss_pred HHHHHhhccCCCceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEc
Q 011567 378 AILRTGLSDIHGLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFV 455 (483)
Q Consensus 378 ~~l~~~L~~~~~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~ 455 (483)
+++++.|+++ +.++. ..+.+++..+.+..+.. .....+++..+. ++||++.+.. +..+||++
T Consensus 317 ~~~~~~L~~l-~~~~~~~~~g~g~~~~i~~~~~~~-----~~~~~~l~~~l~-~~Gv~v~~~~---------~~~lRi~p 380 (401)
T TIGR01885 317 EIFRDQLKKL-PKPIITEVRGRGLLNAIVIDESKT-----GRTAWDLCLKLK-EKGLLAKPTH---------GNIIRLAP 380 (401)
T ss_pred HHHHHHHHhc-cCCceeEEeecCeeEEEEeccCcc-----hhHHHHHHHHHH-hCCEEEEecC---------CCEEEEeC
Confidence 9999999887 33332 13467788777743210 123457787765 4699997642 23499999
Q ss_pred cCCCCHHHHHHHHHHHHHHH
Q 011567 456 SAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 456 ~~~~t~edi~~~~~~l~~~~ 475 (483)
+..+|++||++++++|++++
T Consensus 381 ~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 381 PLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred CccCCHHHHHHHHHHHHHHh
Confidence 99999999999999998875
No 51
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.1e-38 Score=327.69 Aligned_cols=352 Identities=13% Similarity=0.136 Sum_probs=264.8
Q ss_pred CCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC
Q 011567 93 PPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (483)
Q Consensus 93 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g 168 (483)
+.++++++|.|+| .||++||||.++ ..+|| +||+|.+|+++|+++....+. +..+++...+|.++|++.++
T Consensus 30 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~ql~~l~~~~~----~~~~~~~~~~lae~L~~~~p 104 (466)
T PRK07030 30 LIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGH-ANPRINQRIKDQVDQLEHVIL----AGFSHEPVIELSERLVKITP 104 (466)
T ss_pred CceEEeeeccEEEECCCCEEEEcchhHHhhcCCC-CCHHHHHHHHHHHHhcCCccc----cccCCHHHHHHHHHHHHhCC
Confidence 3578999999999 899999999987 57899 899999999999998543221 11245788999999999885
Q ss_pred --CCCEEEecccHHHHHhhhhhh---------ccCCcEEEEcCCchhHHHhHhhhcCCe------------EEEecCC--
Q 011567 169 --TPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHN-- 223 (483)
Q Consensus 169 --~e~~i~~~sG~~a~~~ai~~~---------~~~gdiI~~~~~~h~s~~~g~~~s~~~------------v~~~~~~-- 223 (483)
.+.+++.+||++|++.|++.. ++|..+|.+...||+.+..++.+++.. +..++..
T Consensus 105 ~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~ 184 (466)
T PRK07030 105 PGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDC 184 (466)
T ss_pred CCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCc
Confidence 356667799999999998754 346679999999999887777665532 1112211
Q ss_pred ---------------CHHHHHHHHHHhhhhhhhccCccEEEEEec-ccCCCCCccC----hHHHHHHHHHcCcEEEEeCc
Q 011567 224 ---------------DMDSLRNTLERVTADNKRAKKLRRYIVVEA-VYQNSGQIAP----LDELIRLKEKYRFRVFLDES 283 (483)
Q Consensus 224 ---------------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~-v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa 283 (483)
+.+++++.+.+.. ..+++|++|| +++.+|.+.| |++|+++|++||++||+||+
T Consensus 185 ~~~~~~~~~~~~~~~~l~~le~~~~~~~-------~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV 257 (466)
T PRK07030 185 YLRPEGMSWEEHSRRMFAHMEQTLAEHH-------DEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEI 257 (466)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHhCC-------CceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeeh
Confidence 2345566665322 2589999999 6888888766 89999999999999999999
Q ss_pred cccccccCCCCcc-ccccCCCCCceeEEEccccccccCCCc-----eeeccHHHHHHHHhc-------CCceeecCCCcH
Q 011567 284 NSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALATEGG-----FCTGSARVVDHQRLS-------SSGYVFSASLPP 350 (483)
Q Consensus 284 ~s~g~lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~~GG-----~i~~~~~~~~~~~~~-------~~~~~fs~~~~p 350 (483)
+++ +|++|+++ .+++|+.| ||+ +++|+++ || .+++++++++.+... .++.+| +.||
T Consensus 258 ~TG--fGRtG~~~a~~~~gv~P---Div--~~gKgl~--gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~--~gnp 326 (466)
T PRK07030 258 AVG--FGRTGTMFACEQAGIRP---DFL--CLSKALT--GGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSY--TGNP 326 (466)
T ss_pred hhC--cCccccchHHHhcCCCC---CEE--eeehhcc--CCcccceEEEecHHHHHHHhcccccccccccCCCC--CCCH
Confidence 875 56677655 48999998 898 7999998 55 357889998877421 123334 4599
Q ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceee--cCCCCCEEEEEecCCCCCc---hhhHHHHHHHHHH
Q 011567 351 YLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIA--SNPESPIVFLILEKSTGSM---KNDLQLLEDIADW 425 (483)
Q Consensus 351 ~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~--~~~~~~i~~l~l~~~~~~~---~~~~~~~~~i~~~ 425 (483)
+.|+++.++|+++++++ +.++.++++++|++.|+++...+.. ....+.++.+.+..+.... ..+.....++...
T Consensus 327 la~aaa~a~L~~i~~~~-l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~ 405 (466)
T PRK07030 327 LACAAALATLDIFEQDN-VIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQH 405 (466)
T ss_pred HHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHH
Confidence 99999999999998754 8999999999999999876333322 1345778888774322111 1122234567777
Q ss_pred HHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 426 ALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 426 ~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
+++ +|+++.+.. ..+|+.|++.+|++||++++++++++++++.
T Consensus 406 ~~~-~Gvl~~~~g----------~~i~~~Ppl~it~~eid~~~~~l~~al~~~~ 448 (466)
T PRK07030 406 ALE-RGALLRPLG----------SVVYFLPPYVITPEQIDFLAEVASEGIDIAT 448 (466)
T ss_pred HHH-CCeEEEecC----------CEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 665 599997532 2389999999999999999999999998873
No 52
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.1e-39 Score=329.16 Aligned_cols=356 Identities=19% Similarity=0.249 Sum_probs=265.8
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC--CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA--NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~--~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g 168 (483)
.|+++++++|.++| .||++||||+++ ..+|| +||+|.+|+.+|++++..++ ++ ..++...+|+++|+++++
T Consensus 54 ~~~~i~~a~G~~l~D~dG~~ylD~~g~~~~~lGh-~~p~v~~Ai~~ql~~~~~~~--~~---~~~~~~~~lae~L~~~~p 127 (459)
T PRK06082 54 CLDVLASAEGIYIEDVDGKKYMDFHGNNVHQLGY-GHPHVIEKVKEQMAKLPFSP--RR---FTNETAIECAEKLTEIAG 127 (459)
T ss_pred CCceEEeeeeeEEEECCCCEEEEcccHhhcccCC-CCHHHHHHHHHHHHhCCCcc--Cc---cCCHHHHHHHHHHHHhCC
Confidence 36789999999999 799999999865 45899 89999999999999865432 11 235888999999999986
Q ss_pred C--CCEEEecccHHHHHhhhhh---hccCCcEEEEcCCchhHHHhHhhhcCCeE------------EEec--------CC
Q 011567 169 T--PDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRSTV------------VYFK--------HN 223 (483)
Q Consensus 169 ~--e~~i~~~sG~~a~~~ai~~---~~~~gdiI~~~~~~h~s~~~g~~~s~~~v------------~~~~--------~~ 223 (483)
. +.+++.+||++|++.|++. +++|..+|.+...||+.+..++.+++... ..++ .+
T Consensus 128 ~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (459)
T PRK06082 128 GELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFP 207 (459)
T ss_pred CCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccC
Confidence 4 4566669999999999754 56788899999999999887777665321 1111 22
Q ss_pred C--------HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCC
Q 011567 224 D--------MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRS 292 (483)
Q Consensus 224 d--------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~ 292 (483)
+ ++++++.+++. ..+++|++||++++++.+.| |++|+++|++||++||+||++++ +|++
T Consensus 208 ~~~~~~~~~~~~l~~~i~~~--------~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG--~GRt 277 (459)
T PRK06082 208 DADGSDVHYADYLEYVIEKE--------GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNG--MGRT 277 (459)
T ss_pred ChhHHHHHHHHHHHHHHhcC--------CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhC--CCcc
Confidence 2 23455555431 14899999999988555566 99999999999999999999985 6888
Q ss_pred CCccc-cccCCCCCceeEEEccccccccCC---CceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcH
Q 011567 293 GRGLT-EHCGVPVDKIDIVTAAMGHALATE---GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPD 368 (483)
Q Consensus 293 G~g~~-~~~~v~~~~~Di~~~s~~K~lg~~---GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~ 368 (483)
|+++. +++|+.| ||+ +++|++|.. -|.+++++++.+... ....+ ++.+.||+.|+++.++|++++++ +
T Consensus 278 G~~fa~e~~gv~P---Div--~~gKgl~gG~~P~~av~~~~~i~~~~~-~~~~~-~T~~gnpl~~aaa~a~L~~l~~~-~ 349 (459)
T PRK06082 278 GEWFTHQAYGIEP---DIL--CIGKGLGGGLVPIAAMITKDKYNTAAQ-ISLGH-YTHEKSPLGCAAALATIEVIEQE-G 349 (459)
T ss_pred chhhHhHhhCCCC---CEE--EecccccCCCCcceEEEEcHHHHhhcc-CCCCC-CCCCcCHHHHHHHHHHHHHHHhc-C
Confidence 88765 8999988 888 699999821 133566777765432 11122 45567999999999999999775 4
Q ss_pred HHHHHHHHHHHHHHhhccCC-Cceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccC
Q 011567 369 LITKLKKNTAILRTGLSDIH-GLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKC 445 (483)
Q Consensus 369 ~~~~l~~~~~~l~~~L~~~~-~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~ 445 (483)
+.+++++++++|++.|+++. .+++. ....+.++.+.+..+......+......+...+++ +||++.+...
T Consensus 350 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~~------ 422 (459)
T PRK06082 350 LLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLN-NGLSFKVSQG------ 422 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHh-CCCEEEecCC------
Confidence 89999999999999998752 23222 23467788888854322111222345567777765 5999875321
Q ss_pred CCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011567 446 RLPVGIRLFVSAAHSEADLVKACESLKRISAVVLRD 481 (483)
Q Consensus 446 ~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~ 481 (483)
..||++|+..+|++||+++++++++++.++.++
T Consensus 423 ---~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~~~ 455 (459)
T PRK06082 423 ---NVIQLSPPLIITREELTQALAILEEAIAKICQD 455 (459)
T ss_pred ---CEEEEeCCCccCHHHHHHHHHHHHHHHHHHhhh
Confidence 339999999999999999999999999887554
No 53
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=7.1e-39 Score=327.49 Aligned_cols=352 Identities=18% Similarity=0.212 Sum_probs=261.8
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| .||++||||.++ ..+|| +||+|.+|+.+|+++....+. +...++...++.++|++++
T Consensus 28 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~l~~~~~----~~~~~~~~~~la~~l~~~~ 102 (442)
T PRK13360 28 APRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGH-GRPEIVEAVRAQAGELDYAPA----FQMGHPKAFELANRIAEIA 102 (442)
T ss_pred CCceEEeeeeeEEEeCCCCEEEECchhHHHhccCC-CCHHHHHHHHHHHHhCCCccc----CCcCCHHHHHHHHHHHHhC
Confidence 46789999999999 899999999987 67999 899999999999998643221 1224577889999999998
Q ss_pred C--CCCEEEecccHHHHHhhhhh---hc------cCCcEEEEcCCchhHHHhHhhhcCCe------------EEEecCC-
Q 011567 168 G--TPDSILYSYGLSTMFSAIPC---FC------KKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHN- 223 (483)
Q Consensus 168 g--~e~~i~~~sG~~a~~~ai~~---~~------~~gdiI~~~~~~h~s~~~g~~~s~~~------------v~~~~~~- 223 (483)
+ .+.+.+.+||++|++.|++. ++ +|..+|.+...||+.+..++.+++.. +..+++.
T Consensus 103 p~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~ 182 (442)
T PRK13360 103 PGGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTL 182 (442)
T ss_pred CCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCc
Confidence 5 45677779999999999764 32 35678899999999877666555421 1122222
Q ss_pred C-----------------HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeC
Q 011567 224 D-----------------MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDE 282 (483)
Q Consensus 224 d-----------------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DE 282 (483)
+ .++||++++... +..+++|++||+++++|.+.| |++|+++|++||++||+||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~~------~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DE 256 (442)
T PRK13360 183 DLARNAFSKGQPEHGAELADELERLVTLHD------ASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDE 256 (442)
T ss_pred hhhccccCCChHHHHHHHHHHHHHHHHhcC------CCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1 346666665322 125899999999999999988 9999999999999999999
Q ss_pred ccccccccCCCCcc-ccccCCCCCceeEEEccccccccC---CCceeeccHHHHHHHHhc-------CCceeecCCCcHH
Q 011567 283 SNSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLS-------SSGYVFSASLPPY 351 (483)
Q Consensus 283 a~s~g~lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~---~GG~i~~~~~~~~~~~~~-------~~~~~fs~~~~p~ 351 (483)
++++ +|++|+++ .+++|+.| ||+ +++|+++. +-|.+++++++++.+... .++++|+ .+|+
T Consensus 257 v~tG--~GrtG~~~a~~~~gv~P---Div--t~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~--g~pl 327 (442)
T PRK13360 257 VITG--FGRLGAPFAAQYFGVTP---DLL--TCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYS--GHPL 327 (442)
T ss_pred hhhC--CCCCccchhhhhcCCCC---cee--eeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCC--CCHH
Confidence 9963 46666655 58899988 887 89999972 123466788998876532 1334444 5999
Q ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHh
Q 011567 352 LASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKE 429 (483)
Q Consensus 352 ~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~--~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~ 429 (483)
.|+++.++|+++++.+ +.++++++.+++++.|+++..++... ...+.+..+.+...... +...+.++...+++
T Consensus 328 ~~aaa~a~L~~l~~~~-l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~---~~~~~~~~~~~l~~- 402 (442)
T PRK13360 328 ACAAALATLDLYEREG-LLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGK---PGKRAYEVFLKCFE- 402 (442)
T ss_pred HHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCC---cchhHHHHHHHHHH-
Confidence 9999999999998764 89999999999999998753332221 22344555665432111 11234567776665
Q ss_pred CCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 430 DGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 430 ~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
+||++.... ..|||+|++.+|++|||+++++++++++++
T Consensus 403 ~Gvl~~~~~----------~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 403 KGLMIRYTG----------DILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred CCcEEEecC----------CEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 599986532 239999999999999999999999999775
No 54
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=326.91 Aligned_cols=363 Identities=19% Similarity=0.230 Sum_probs=264.6
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| .||++||||.++ ..+|| +||+|.+|+.+++++....+. ....+++...+++++|++.+
T Consensus 24 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~ql~~~~~~~~---~~~~~~~~~~~lae~L~~~~ 99 (449)
T PRK07481 24 PPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGH-NREEVKEAIVRQLDELEYYST---FDGTTHPRAIELSYELIDMF 99 (449)
T ss_pred CCceEEeccccEEEeCCCCEEEECchhHHhhcCCC-CCHHHHHHHHHHHHhccceec---ccccCCHHHHHHHHHHHHhc
Confidence 47789999999999 899999999986 67999 899999999999998543211 01124678899999999998
Q ss_pred C---CCCEEEecccHHHHHhhhhh---hc------cCCcEEEEcCCchhHHHhHhhhcCCe------------EEEe---
Q 011567 168 G---TPDSILYSYGLSTMFSAIPC---FC------KKGDLIVADEGVHWGIQNGLYLSRST------------VVYF--- 220 (483)
Q Consensus 168 g---~e~~i~~~sG~~a~~~ai~~---~~------~~gdiI~~~~~~h~s~~~g~~~s~~~------------v~~~--- 220 (483)
+ .+.+++.+||++|++.|++. ++ +|..+|.+..+||+.+..++.+++.. +..+
T Consensus 100 ~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~ 179 (449)
T PRK07481 100 APEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETP 179 (449)
T ss_pred CCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCC
Confidence 4 34566779999999999864 32 46679999999999877666554321 1111
Q ss_pred -----cCC--CHHHHHHHHHH-hhhhhh-hccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccc
Q 011567 221 -----KHN--DMDSLRNTLER-VTADNK-RAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFG 287 (483)
Q Consensus 221 -----~~~--d~~~Le~~l~~-~~~~~~-~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g 287 (483)
+.| |.+.+++.+.+ ...... ..+..+++|++||+++++|.+.| |++|+++|++||++||+||++++
T Consensus 180 ~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tG- 258 (449)
T PRK07481 180 WLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTG- 258 (449)
T ss_pred cccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhC-
Confidence 123 55554433211 110000 12236999999999999898776 99999999999999999999985
Q ss_pred cccCCCCcc-ccccCCCCCceeEEEccccccccC---CCceeeccHHHHHHHHhc-------CCceeecCCCcHHHHHHH
Q 011567 288 VLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLS-------SSGYVFSASLPPYLASAA 356 (483)
Q Consensus 288 ~lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~---~GG~i~~~~~~~~~~~~~-------~~~~~fs~~~~p~~~aaa 356 (483)
+|++|.++ .+++|+.| ||+ +++|+++. +-|.+++++++++.+... .++.+| +.||+.|+++
T Consensus 259 -fGRtG~~~a~~~~gv~P---Div--~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~--~gnpl~~aaa 330 (449)
T PRK07481 259 -FGRTGSWFGSRGWGVKP---DIM--CLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTY--SGHPVACAAA 330 (449)
T ss_pred -cCcCchhhHhhhcCCCC---CEE--EEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCC--CCCHHHHHHH
Confidence 57777655 57899988 898 79999972 123467888998887532 123334 4599999999
Q ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHhhccCC-Cceee--cCCCCCEEEEEecCCCCCc---hhhHHHHHHHHHHHHHhC
Q 011567 357 ITAIDVLEENPDLITKLKKNTAILRTGLSDIH-GLSIA--SNPESPIVFLILEKSTGSM---KNDLQLLEDIADWALKED 430 (483)
Q Consensus 357 ~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~-~~~i~--~~~~~~i~~l~l~~~~~~~---~~~~~~~~~i~~~~l~~~ 430 (483)
.++|++++++ ++.++++++.++|++.|+++. .+++. ....+.++.+.+..+.... +........+...+++ +
T Consensus 331 ~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 408 (449)
T PRK07481 331 LATLDIVVRE-DLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARE-N 408 (449)
T ss_pred HHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHh-C
Confidence 9999999874 589999999999999997753 23322 2345778888875322111 1112345567777665 5
Q ss_pred CEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 431 GVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 431 Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
||++.+.. ..+|++|+..+|++|||+++++++++++++.
T Consensus 409 Gvl~~~~g----------~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 409 GVLVRPSG----------TKIILSPPLVIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred CeEEEecC----------CEEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 99987542 2289999999999999999999999998753
No 55
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-38 Score=324.91 Aligned_cols=360 Identities=16% Similarity=0.185 Sum_probs=264.4
Q ss_pred CCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC
Q 011567 93 PPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (483)
Q Consensus 93 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g 168 (483)
|+++++++|.|+| .||++||||.++ ..+|| +||+|.+|+++|+++....+. +....+...+++++|++.++
T Consensus 35 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Av~~q~~~~~~~~~----~~~~~~~~~~la~~l~~~~p 109 (460)
T PRK06541 35 VPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGH-GRAELAEAAAKQAGTLAFFPL----WSYAHPPAIELAERLAALAP 109 (460)
T ss_pred CceEEeCcccEEEeCCCCEEEECCccHHhccCCC-CCHHHHHHHHHHHhhCcCccc----cccCCHHHHHHHHHHHHhCC
Confidence 6789999999999 899999999997 67999 899999999999998643221 12245788999999999875
Q ss_pred C--CCEEEecccHHHHHhhhhhh------c---cCCcEEEEcCCchhHHHhHhhhcCCe------------EEEec----
Q 011567 169 T--PDSILYSYGLSTMFSAIPCF------C---KKGDLIVADEGVHWGIQNGLYLSRST------------VVYFK---- 221 (483)
Q Consensus 169 ~--e~~i~~~sG~~a~~~ai~~~------~---~~gdiI~~~~~~h~s~~~g~~~s~~~------------v~~~~---- 221 (483)
. +.+++++||++|++.|++.. + +|.++|.+...||+.+..++.+++.. +..++
T Consensus 110 ~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~ 189 (460)
T PRK06541 110 GDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNF 189 (460)
T ss_pred CCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCcc
Confidence 3 56677799999999997642 2 36678999999999988777665422 11122
Q ss_pred -----C-CCH--------HHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCc
Q 011567 222 -----H-NDM--------DSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDES 283 (483)
Q Consensus 222 -----~-~d~--------~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa 283 (483)
+ +|. +.+++.++... +.++++|++||+++++|.+.| |++|+++|++||++||+||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~------~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV 263 (460)
T PRK06541 190 YRAPELGDDPEAFGRWAADRIEEAIEFEG------PDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEV 263 (460)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHhcC------CCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEech
Confidence 1 222 44555554321 235899999999999999988 99999999999999999999
Q ss_pred cccccccCCCCcc-ccccCCCCCceeEEEccccccccC---CCceeeccHHHHHHHHhcCCc--eeecCCCcHHHHHHHH
Q 011567 284 NSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSSG--YVFSASLPPYLASAAI 357 (483)
Q Consensus 284 ~s~g~lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~---~GG~i~~~~~~~~~~~~~~~~--~~fs~~~~p~~~aaa~ 357 (483)
+++ +|++|+++ .+++|+.| ||+ +++|+++. +-|.+++++++++.+...... +.++.+.||+.+++++
T Consensus 264 ~tG--fGR~G~~~a~~~~gv~P---Div--t~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaal 336 (460)
T PRK06541 264 ICA--FGRLGEMFGCERFGYVP---DII--TCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVAL 336 (460)
T ss_pred hhC--CCcCchhhhhhhcCCCC---CEE--EecccccCCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHH
Confidence 953 34555554 57899987 887 69999982 234567788888877543212 2234457999999999
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceee--cCCCCCEEEEEecCCCCCc---hh---hHHHHHHHHHHHHHh
Q 011567 358 TAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIA--SNPESPIVFLILEKSTGSM---KN---DLQLLEDIADWALKE 429 (483)
Q Consensus 358 ~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~--~~~~~~i~~l~l~~~~~~~---~~---~~~~~~~i~~~~l~~ 429 (483)
++++.+++. ++.+++++++++|++.|+++..+++. ....+.++.+.+..+.... .. +......+...+++
T Consensus 337 a~l~~l~~~-~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 414 (460)
T PRK06541 337 ANLDIFERE-GLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFE- 414 (460)
T ss_pred HHHHHHHhc-cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHh-
Confidence 999998765 48899999999999999886433332 2356788888875321110 00 11112356666665
Q ss_pred CCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 430 DGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 430 ~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
+||++.+.... ...||++|++.+|++|||++++++++++.++.
T Consensus 415 ~Gi~~~~~~~g-------~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 415 AGLYCRADDRG-------DPVVQLAPPLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred CCeEEEecCCC-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 59999763110 13399999999999999999999999998764
No 56
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=1.1e-38 Score=324.91 Aligned_cols=346 Identities=19% Similarity=0.238 Sum_probs=270.0
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++.+++|.+++ .||++||||+++ ++||| +||++.+++.++++++... + ...+.+.+.+++++|+++.
T Consensus 22 ~~~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~--~---~~~~~~~~~~l~~~l~~~~ 95 (403)
T PRK05093 22 AEFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLWHI--S---NVFTNEPALRLAKKLIDAT 95 (403)
T ss_pred CCeeEEEeecCEEEeCCCCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcCcc--c---CccCCHHHHHHHHHHHhhC
Confidence 46788999999999 899999999997 89999 9999999999999885321 1 1234577889999999999
Q ss_pred CCCCEEEecccHHHHHhhhhhh---------ccCCcEEEEcCCchhHHHhHhhhc------------CCeEEEecCCCHH
Q 011567 168 GTPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLS------------RSTVVYFKHNDMD 226 (483)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~~~---------~~~gdiI~~~~~~h~s~~~g~~~s------------~~~v~~~~~~d~~ 226 (483)
+.+.+++++||++|++.|++.. .++.++|.++..+|+++..++.++ ..++..+++||++
T Consensus 96 ~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 175 (403)
T PRK05093 96 FAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLA 175 (403)
T ss_pred CCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCHH
Confidence 8888899999999999998754 357789999999999877554432 2346778999999
Q ss_pred HHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cccC
Q 011567 227 SLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EHCG 301 (483)
Q Consensus 227 ~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~~~ 301 (483)
++++.+.+ .+++|++||+++++|.+.| +++|+++|++||+++|+||+|++ +|++|++.. ++++
T Consensus 176 ~l~~~l~~----------~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g--~g~~g~~~~~~~~~ 243 (403)
T PRK05093 176 AVKAVIDD----------HTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTG--MGRTGDLFAYMHYG 243 (403)
T ss_pred HHHHHhcC----------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC--CCCCccchhhhhcC
Confidence 99887742 3789999999999887755 99999999999999999999984 577777554 5778
Q ss_pred CCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q 011567 302 VPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAI 379 (483)
Q Consensus 302 v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~ 379 (483)
+.| |++ |+||++++ +.|++++++++++.+.......+| +.+|..++++.++|+.+.+ ++..++++++.++
T Consensus 244 ~~p---di~--s~sK~l~~G~rig~vv~~~~i~~~l~~~~~~~t~--~~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~~~ 315 (403)
T PRK05093 244 VTP---DIL--TSAKALGGGFPIGAMLTTAEIASHFKVGTHGSTY--GGNPLACAVAEAVFDIINT-PEVLEGVKARRQR 315 (403)
T ss_pred CCC---CEE--EecccccCCcceEEEEEcHHHHhhcCCCCCCCCC--CCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHH
Confidence 776 665 89999983 237788899999887654444444 4588899999999998865 4578999999999
Q ss_pred HHHhhccCC-Ccee--ecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEcc
Q 011567 380 LRTGLSDIH-GLSI--ASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVS 456 (483)
Q Consensus 380 l~~~L~~~~-~~~i--~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~ 456 (483)
+.+.|+++. .+.+ ..+..+.++++.+.+.. .....+++..+++ +||++.+.. ++.+|++++
T Consensus 316 l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~------~~~~~~~~~~l~~-~Gv~v~~~g---------~~~lRl~~~ 379 (403)
T PRK05093 316 FVDGLQKINQKYGVFSEIRGMGLLIGAELKPQY------KGRARDFLNAAAE-EGVMVLVAG---------PDVLRFAPS 379 (403)
T ss_pred HHHHHHHHHhhCCCeEeEeeCceEEEEEecCcc------hhHHHHHHHHHHH-CCeEEecCC---------CCEEEEeCC
Confidence 999998751 1211 22234667777774311 1234567877766 489987532 134999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Q 011567 457 AAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 457 ~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
..+|+++|++++++|++++.++.
T Consensus 380 ~~~~~~~i~~~~~~l~~~l~~~~ 402 (403)
T PRK05093 380 LVIEEADIDEGLARFEKAVAKVV 402 (403)
T ss_pred CCCCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999987653
No 57
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=2.8e-38 Score=326.19 Aligned_cols=350 Identities=21% Similarity=0.227 Sum_probs=269.5
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| +||++||||.++ ..+|| +||+|.+|++++++++..++. .+ ..+...+|+++|++++
T Consensus 57 ~p~~~~~a~G~~l~d~dG~~ylD~~sg~~~~~~Gh-~~p~v~~ai~~ql~~~~~~~~---~~--~~~~~~~la~~L~~~~ 130 (474)
T PLN02624 57 IPVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGH-CHPKIIKALTEQAEKLTLSSR---AF--YNDKFPEFAEYLTSMF 130 (474)
T ss_pred CCceEEeeeeCEEEECCCCEEEEcccchhcccCCC-CCHHHHHHHHHHHHhcCCccc---cc--CCHHHHHHHHHHHhhc
Confidence 46788999999999 899999999987 46899 899999999999999765432 12 3578899999999999
Q ss_pred CCCCEEEecccHHHHHhhhhhhcc-----------CCcEEEEcCCchhHHHhHhhhcCC------------eEEEecCCC
Q 011567 168 GTPDSILYSYGLSTMFSAIPCFCK-----------KGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHND 224 (483)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~~~~~-----------~gdiI~~~~~~h~s~~~g~~~s~~------------~v~~~~~~d 224 (483)
|.+.+++++||++|++.|++.... +..+|.+...+|+.+...+.+++. .+..++++|
T Consensus 131 ~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d 210 (474)
T PLN02624 131 GYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGD 210 (474)
T ss_pred CCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCC
Confidence 988899999999999999864321 224778888999887766665432 245678899
Q ss_pred HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cc
Q 011567 225 MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EH 299 (483)
Q Consensus 225 ~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~ 299 (483)
.+.+++.++.... .+++|++||+++++|.+.| |++|+++|++||+++|+||+|++ +|++|.++. ++
T Consensus 211 ~~~l~~~l~~~~~-------~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG--~GrtG~~~a~~~ 281 (474)
T PLN02624 211 LDALEKIFEEDGD-------RIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTG--LARTGKMLACDW 281 (474)
T ss_pred HHHHHHHHHhCCC-------CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--cCcCcchhhHHh
Confidence 9999998865322 4899999999999999888 99999999999999999999984 688887665 56
Q ss_pred cCCCCCceeEEEccccccccCC---CceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHH
Q 011567 300 CGVPVDKIDIVTAAMGHALATE---GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKN 376 (483)
Q Consensus 300 ~~v~~~~~Di~~~s~~K~lg~~---GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~ 376 (483)
+++.| |++ +++|++|.. .|++++++++++.+....++.+| +.+|+.++++.++|+.+++. ++.+++.++
T Consensus 282 ~~i~p---Div--~lsK~lggG~~pigav~~~~~i~~~~~~~~~~~T~--~g~pl~~aaa~aaLe~l~~~-~l~~~~~~~ 353 (474)
T PLN02624 282 EEVRP---DVV--ILGKALGGGVIPVSAVLADKDVMLCIKPGEHGSTF--GGNPLASAVAMAALQVVQDE-KLAERSAKL 353 (474)
T ss_pred cCCCC---CEE--EecccccCCCCcceeeeecHHHHhHhccCCcCCCC--CCCHHHHHHHHHHHHHHHhc-hHHHHHHHH
Confidence 78776 887 589999832 25677888888876544444444 45899999999999988764 478888889
Q ss_pred HHHHHHhhccCC-Cce--ee-cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceE
Q 011567 377 TAILRTGLSDIH-GLS--IA-SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIR 452 (483)
Q Consensus 377 ~~~l~~~L~~~~-~~~--i~-~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lR 452 (483)
.+++++.|+++. .++ +. ..+.+.++.+.+..+.. ......++++.++ ++||++.+.. +..||
T Consensus 354 ~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~----~~~~a~~~~~~L~-e~GV~v~p~~---------~~~lR 419 (474)
T PLN02624 354 GQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKL----GPVSAYDVCLKLK-ERGLLAKPTH---------DTIIR 419 (474)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCc----ChHHHHHHHHHHH-hCCeEEecCC---------CCEEE
Confidence 899998887641 121 11 12456677777743210 1123456777654 5699997642 13499
Q ss_pred EEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 453 LFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 453 i~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
|+|++.+|++||++++++|++++.+-
T Consensus 420 ~~p~l~~t~e~id~~l~~L~~~l~~~ 445 (474)
T PLN02624 420 LAPPLSISEDELQECSKALSDVLEHD 445 (474)
T ss_pred EECCccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988653
No 58
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-38 Score=325.19 Aligned_cols=357 Identities=16% Similarity=0.195 Sum_probs=263.1
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| +|||+||||.++ ..+|| +||+|.+|+.+|+++....+.. ...+++...+|.++|++.+
T Consensus 33 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~~~~~~~~~---~~~~~~~~~~lae~L~~~~ 108 (466)
T PRK07036 33 GSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGY-GREEMADAIADQARRLPYYTPF---GDMTNAPAAELAAKLAELA 108 (466)
T ss_pred CCceEEeCceeEEEECCCCEEEECcccHHhhcCCC-CCHHHHHHHHHHHHhCcccccc---cccCCHHHHHHHHHHHHhC
Confidence 47789999999999 899999999987 67999 8999999999999985432211 0124577899999999988
Q ss_pred CC--CCEEEecccHHHHHhhhhhh---------ccCCcEEEEcCCchhHHHhHhhhcCCe------------EEEecCCC
Q 011567 168 GT--PDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHND 224 (483)
Q Consensus 168 g~--e~~i~~~sG~~a~~~ai~~~---------~~~gdiI~~~~~~h~s~~~g~~~s~~~------------v~~~~~~d 224 (483)
+. +.+++.+||++|++.|++.. ++|..+|.+...||+.+..++.+++.. +..++..+
T Consensus 109 p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~ 188 (466)
T PRK07036 109 PGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPN 188 (466)
T ss_pred CCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCc
Confidence 63 45666699999999998753 236678889999999887666655421 11111111
Q ss_pred -----------------HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCc
Q 011567 225 -----------------MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDES 283 (483)
Q Consensus 225 -----------------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa 283 (483)
.+.+++.+... .+..+++|++||+++++|.+.| |++|+++|++||+++|+||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~------~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV 262 (466)
T PRK07036 189 PYRRPAGMSEAAFCDFLVDEFEDKILSL------GADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEV 262 (466)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHHHc------CCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeec
Confidence 12334434321 2236999999999999998887 99999999999999999999
Q ss_pred cccccccCCCCcc-cc-ccCCCCCceeEEEccccccccC---CCceeeccHHHHHHHHhc-------CCceeecCCCcHH
Q 011567 284 NSFGVLGRSGRGL-TE-HCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLS-------SSGYVFSASLPPY 351 (483)
Q Consensus 284 ~s~g~lg~~G~g~-~~-~~~v~~~~~Di~~~s~~K~lg~---~GG~i~~~~~~~~~~~~~-------~~~~~fs~~~~p~ 351 (483)
+++ +|++|..+ .+ ++|+.| ||+ +++|++|. +-|.+++++++++.+... .++.+| +.+|+
T Consensus 263 ~tG--fGRtG~~~~~~~~~gv~P---Div--t~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~--~gnpl 333 (466)
T PRK07036 263 VTG--FGRLGHFFASEAVFGIQP---DII--TFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTY--SGHPV 333 (466)
T ss_pred hhC--CCcCchhhhhhhhcCCCC---CEE--EEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCC--CCCHH
Confidence 975 56666533 45 789988 888 79999972 124457889999887532 122334 45999
Q ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceee--cCCCCCEEEEEecCCCCCc---hhhHHHHHHHHHHH
Q 011567 352 LASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIA--SNPESPIVFLILEKSTGSM---KNDLQLLEDIADWA 426 (483)
Q Consensus 352 ~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~--~~~~~~i~~l~l~~~~~~~---~~~~~~~~~i~~~~ 426 (483)
.|++++++|+++++. ++.+++++++++|++.|+++..+++. ....+.++.+.+..+.... ..+......+...|
T Consensus 334 ~~aaa~a~Le~i~~~-~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (466)
T PRK07036 334 ACAAALKNIEIMERE-GLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHC 412 (466)
T ss_pred HHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHH
Confidence 999999999999765 59999999999999999775433322 2345778888875432211 11233456677776
Q ss_pred HHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 427 LKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 427 l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
++ +||++.+.. ..+|++|+..+|++|||++++++++++.++.
T Consensus 413 ~~-~Gvl~~~~~----------~~~~l~Ppl~it~~~id~~~~~l~~al~~~~ 454 (466)
T PRK07036 413 QE-RGLLVRPLE----------HLCVLSPPLIITRAQIDEIVAILRAAIEETA 454 (466)
T ss_pred HH-CCcEEeecC----------CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 65 599987532 1289999999999999999999999988763
No 59
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.6e-38 Score=325.05 Aligned_cols=351 Identities=17% Similarity=0.207 Sum_probs=266.3
Q ss_pred cCCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q 011567 91 CEPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKF 166 (483)
Q Consensus 91 ~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~ 166 (483)
+.|+++++++|.|+| .||++||||.++ ..+|| +||++.+|+++++++...... ..-+++...+|+++|++.
T Consensus 23 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~~~~~----~~~~~~~~~~la~~l~~~ 97 (423)
T PRK05964 23 PPPIPIVRAEGAYLYLADGRELIDAISSWWVATHGH-NHPYIDQAIREQLDRLDHVIF----AGFTHEPAERLAQRLVAL 97 (423)
T ss_pred CCCeeEEeccccEEEeCCCCEEEEcchhHHhccCCC-CCHHHHHHHHHHHhhCCCccc----cccCCHHHHHHHHHHHHh
Confidence 357889999999999 899999999987 67999 899999999999998543211 012457788999999999
Q ss_pred hC--CCCEEEecccHHHHHhhhhhh---------ccCCcEEEEcCCchhHHHhHhhhcC--------------CeEEEec
Q 011567 167 LG--TPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSR--------------STVVYFK 221 (483)
Q Consensus 167 ~g--~e~~i~~~sG~~a~~~ai~~~---------~~~gdiI~~~~~~h~s~~~g~~~s~--------------~~v~~~~ 221 (483)
++ .+.+++.+||++|++.|++.. ++|..+|.+...||+.+...+.+++ ...+.++
T Consensus 98 ~p~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~ 177 (423)
T PRK05964 98 TPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFP 177 (423)
T ss_pred CCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCC
Confidence 85 456777799999999998753 4677899999999998766655433 2234556
Q ss_pred CCC-----HHHHHHHHHHhhhhhhhccCccEEEEEec-ccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccC
Q 011567 222 HND-----MDSLRNTLERVTADNKRAKKLRRYIVVEA-VYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGR 291 (483)
Q Consensus 222 ~~d-----~~~Le~~l~~~~~~~~~~~~~~~~iv~e~-v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~ 291 (483)
++| .+++++.+++... .+++|++|| +++.+|...| |++|+++|++||++||+||+|++ +|+
T Consensus 178 ~~d~~~~~~~~l~~~l~~~~~-------~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg--~gr 248 (423)
T PRK05964 178 PDGYEQATLDALEALLEKHAG-------EIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATG--FGR 248 (423)
T ss_pred cchhHHHHHHHHHHHHHhCCC-------cEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhC--CCc
Confidence 666 6777777764322 488999999 5777787765 99999999999999999999974 577
Q ss_pred CCCccc-cccCCCCCceeEEEccccccccC---CCceeeccHHHHHHHHhc--CCceeec--CCCcHHHHHHHHHHHHHH
Q 011567 292 SGRGLT-EHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLS--SSGYVFS--ASLPPYLASAAITAIDVL 363 (483)
Q Consensus 292 ~G~g~~-~~~~v~~~~~Di~~~s~~K~lg~---~GG~i~~~~~~~~~~~~~--~~~~~fs--~~~~p~~~aaa~~al~~l 363 (483)
+|.++. +++++.| |++ +++|+++. +.|++++++++++.+... ...+.++ .+.+|+.++++.++++.+
T Consensus 249 ~G~~~a~~~~~v~p---Di~--~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l 323 (423)
T PRK05964 249 TGTLFACEQAGVSP---DIM--CLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLF 323 (423)
T ss_pred CcchhHHHhcCCCC---Cee--eeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHH
Confidence 787654 7889887 887 78999962 235578899999887532 1122222 246999999999999999
Q ss_pred hcCcHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccc
Q 011567 364 EENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSM 441 (483)
Q Consensus 364 ~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~--~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~ 441 (483)
++++ +.++++++.+++++.|+++..++... ...+.++.+.+.+... ......+...+++ +||++.+..
T Consensus 324 ~~~~-~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~-----~~~~~~l~~~l~~-~Gv~v~~~~--- 393 (423)
T PRK05964 324 EDEP-VLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVL-----ERDGPALRAFALE-RGVLLRPLG--- 393 (423)
T ss_pred HhcC-HHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcc-----hhHHHHHHHHHHH-CCeEEEecC---
Confidence 7654 88999999999999998764443221 3456777888753210 1234467776554 699997642
Q ss_pred cccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 442 LDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 442 ~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
+.||++|+..+|++|||++++++++++++
T Consensus 394 -------~~lR~~p~l~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 394 -------NTIYLMPPYIITAEELDRITDAIVEVADE 422 (423)
T ss_pred -------CEEEEeCCcccCHHHHHHHHHHHHHHHhh
Confidence 23999999999999999999999999876
No 60
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-38 Score=326.78 Aligned_cols=360 Identities=18% Similarity=0.268 Sum_probs=267.7
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| .|||+||||.++ ..+|| +||+|.+|+.+++++... .+. .....+...+++++|++.+
T Consensus 38 ~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~~-~~~---~~~~~~~~~~la~~l~~~~ 112 (443)
T PRK06058 38 LPVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGN-SAPRVVEAVREQVARFTH-TCF---MVTPYEGYVAVAEQLNRLT 112 (443)
T ss_pred CCceEEeeeeeEEEeCCCCEEEEcCcchhhhccCC-CCHHHHHHHHHHHHhccC-ccc---cccCCHHHHHHHHHHHHhC
Confidence 47889999999999 899999999997 67999 899999999999998532 111 1234578889999999998
Q ss_pred CC---CCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcCC-------------eEEE----ecCCC
Q 011567 168 GT---PDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRS-------------TVVY----FKHND 224 (483)
Q Consensus 168 g~---e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~~-------------~v~~----~~~~d 224 (483)
+. +.+++++||++|++.|++ .+++|..+|.++..||+.+..++.+++. .+.. ++.++
T Consensus 113 p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (443)
T PRK06058 113 PGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRD 192 (443)
T ss_pred CCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCccccc
Confidence 63 456777999999999987 6778888999999999998777765431 1111 12223
Q ss_pred H--------HHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCC
Q 011567 225 M--------DSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRS 292 (483)
Q Consensus 225 ~--------~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~ 292 (483)
. +.+++.++...... .+..+++|++||+++++|.+.| |++|+++|++||+++|+||++++ +|++
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~--~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tG--fgRt 268 (443)
T PRK06058 193 PKGLATDGEEAAARAITVIEKQV--GADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTG--FART 268 (443)
T ss_pred ccccccchHHHHHHHHHHHHHhh--CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcC
Confidence 1 22223332211100 1125899999999999888876 99999999999999999999985 5777
Q ss_pred CCcc-ccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHH
Q 011567 293 GRGL-TEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDL 369 (483)
Q Consensus 293 G~g~-~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~ 369 (483)
|.++ .+++|+.| |++ +++|++|. +-|++++++++++.+....++.+| +.||+.|+++.++|+.++++ ++
T Consensus 269 G~~fa~~~~gv~P---Div--~~gK~l~~G~Pi~av~~~~~i~~~~~~~~~~~T~--~gnpl~~aaa~a~L~~~~~~-~l 340 (443)
T PRK06058 269 GAWFACEHEGIVP---DLI--TTAKGIAGGLPLSAVTGRAEIMDAPHPGGLGGTY--GGNPVACAAALAAIETIEED-DL 340 (443)
T ss_pred hhhhHHHhcCCCC---CEE--EEcccccCCCccEEEEEcHHHHhhccCCCCCCCC--CCCHHHHHHHHHHHHHHHHc-CH
Confidence 7654 58899988 888 68999982 124578899999887655444455 45999999999999998765 48
Q ss_pred HHHHHHHHHHHHHhhccCC-Ccee--ecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCC
Q 011567 370 ITKLKKNTAILRTGLSDIH-GLSI--ASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCR 446 (483)
Q Consensus 370 ~~~l~~~~~~l~~~L~~~~-~~~i--~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~ 446 (483)
.++++++.++|+++|+++. .+++ ...+.+.++.+.+.++.. ...+......+...+++ +||++.+....
T Consensus 341 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~-~~~~~~~~~~l~~~~~~-~Gv~~~~~~~~------ 412 (443)
T PRK06058 341 VARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGT-TEPDAELTKALAAAAHA-AGVIVLTCGTY------ 412 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCC-CCCcHHHHHHHHHHHHH-CCeEEeccCCC------
Confidence 9999999999999998752 2232 124567788888743211 11233445677777665 59999764211
Q ss_pred CCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 447 LPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 447 ~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
.+.||+.|+..+|++||+++++++++++++
T Consensus 413 -~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 413 -GNVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred -CCEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 134999999999999999999999999865
No 61
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.8e-38 Score=324.77 Aligned_cols=352 Identities=18% Similarity=0.238 Sum_probs=263.7
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| .||++||||.++ ..+|| +||+|.+++++++++....+. +....+...+|.++|++.+
T Consensus 31 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~l~~~~~----~~~~~~~~~~la~~L~~~~ 105 (445)
T PRK09221 31 APRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGH-GRPEIVEAVARQAATLDYAPA----FQMGHPLAFELAERLAELA 105 (445)
T ss_pred CCceEEeccccEEEeCCCCEEEEccccHhhccCCC-CCHHHHHHHHHHHHhccCccc----cccCCHHHHHHHHHHHHhC
Confidence 46789999999999 899999999987 67999 899999999999998543221 1124577889999999998
Q ss_pred C--CCCEEEecccHHHHHhhhhhhc---------cCCcEEEEcCCchhHHHhHhhhcCCe------------EEEecCCC
Q 011567 168 G--TPDSILYSYGLSTMFSAIPCFC---------KKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHND 224 (483)
Q Consensus 168 g--~e~~i~~~sG~~a~~~ai~~~~---------~~gdiI~~~~~~h~s~~~g~~~s~~~------------v~~~~~~d 224 (483)
+ .+.+.+.+||++|++.|++... +|..+|.+...||+.+..++.+++.. +..++..+
T Consensus 106 p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (445)
T PRK09221 106 PGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTL 185 (445)
T ss_pred CCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCc
Confidence 5 3567777999999999986432 35568889999999877666555421 11122111
Q ss_pred ------------------HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeC
Q 011567 225 ------------------MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDE 282 (483)
Q Consensus 225 ------------------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DE 282 (483)
.++++++++.... ..+++|++||+++++|.+.| |++|+++|++||++||+||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~------~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DE 259 (445)
T PRK09221 186 DLPENAFSKGQPEHGAELADDLERLVALHDA------STIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDE 259 (445)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHHhcCC------CcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEee
Confidence 2456666654321 25899999999999999988 9999999999999999999
Q ss_pred ccccccccCCCCcc-ccccCCCCCceeEEEccccccccC---CCceeeccHHHHHHHHhc-------CCceeecCCCcHH
Q 011567 283 SNSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLS-------SSGYVFSASLPPY 351 (483)
Q Consensus 283 a~s~g~lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~---~GG~i~~~~~~~~~~~~~-------~~~~~fs~~~~p~ 351 (483)
++++ +|++|.++ .+++++.| ||+ +++|+++. +.|.+++++++++.+... .++++|+ .||+
T Consensus 260 V~tG--~GRtG~~~~~~~~gv~P---Di~--~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~--~~pl 330 (445)
T PRK09221 260 VITG--FGRLGAAFAAERFGVTP---DII--TFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYS--AHPV 330 (445)
T ss_pred hhhC--CCcCchhhHHHhcCCCC---CEE--EeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCC--cCHH
Confidence 9974 67778776 58899988 887 79999962 235567888998877531 1334444 5999
Q ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHh
Q 011567 352 LASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKE 429 (483)
Q Consensus 352 ~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~--~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~ 429 (483)
.+++++++|+.++++ ++.++++++.++|++.|+++.+++... ...+.+..+.+...... ......++.+.+++
T Consensus 331 ~~aaa~a~L~~i~~~-~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~---~~~~~~~~~~~~~~- 405 (445)
T PRK09221 331 ACAAGLATLDIYREE-DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGA---PGARGYEAFMKCFE- 405 (445)
T ss_pred HHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEeccccc---ccchHHHHHHHHHH-
Confidence 999999999999875 489999999999999998764433222 23455666666432110 11224467776665
Q ss_pred CCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 430 DGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 430 ~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
+||++.... ..||++|++.+|++||+++++++++++.++
T Consensus 406 ~Gv~~~~~~----------~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 406 KGLLVRYTG----------DTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred CCeEEeecC----------CEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 599986531 349999999999999999999999998764
No 62
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=3.4e-38 Score=323.45 Aligned_cols=358 Identities=15% Similarity=0.213 Sum_probs=262.4
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| .||++||||.++ ..+|| +||+|.+|+++|+++....+. .+...++...+|+++|++.+
T Consensus 32 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~~~~~~~~---~~~~~~~~~~~lae~L~~~~ 107 (456)
T PRK07480 32 GSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGY-GRKELADAAARQMRELPYYNT---FFKTTHPPAIELAAKLAEVA 107 (456)
T ss_pred CCceEEeceeeEEEeCCCCEEEEccchHHHhcCCC-CCHHHHHHHHHHHHhcCCccc---ccccCCHHHHHHHHHHHHhC
Confidence 36789999999999 899999999987 67999 899999999999998543211 11235688899999999998
Q ss_pred CC--CCEEEecccHHHHHhhhhhh---------ccCCcEEEEcCCchhHHHhHhhhcCCe------------EEEecCC-
Q 011567 168 GT--PDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHN- 223 (483)
Q Consensus 168 g~--e~~i~~~sG~~a~~~ai~~~---------~~~gdiI~~~~~~h~s~~~g~~~s~~~------------v~~~~~~- 223 (483)
+. +.+++.+||++|++.|++.. ++|..+|.++..||+.+..++.+++.. +..+++.
T Consensus 108 p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~ 187 (456)
T PRK07480 108 PPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPY 187 (456)
T ss_pred CCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCc
Confidence 63 56777799999999998643 235568889999999887776665422 1111111
Q ss_pred --------C--------HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCc
Q 011567 224 --------D--------MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDES 283 (483)
Q Consensus 224 --------d--------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa 283 (483)
+ .+.|++.+.+. .+..+++|++||+++++|.+.| |++|+++|++||++||+||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV 261 (456)
T PRK07480 188 WFGEGGDMTPEEFGLAAARQLEAKILEL------GADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEV 261 (456)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHHhc------CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEech
Confidence 1 13444333221 1235899999999999898777 99999999999999999999
Q ss_pred cccccccCCCCcc-ccccCCCCCceeEEEccccccccC---CCceeeccHHHHHHHHh--c--CCceeecCCCcHHHHHH
Q 011567 284 NSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRL--S--SSGYVFSASLPPYLASA 355 (483)
Q Consensus 284 ~s~g~lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~---~GG~i~~~~~~~~~~~~--~--~~~~~fs~~~~p~~~aa 355 (483)
+++ +|++|+++ .+++|+.| ||+ +++|+++. +-|.+++++++++.++. . .++.+|+ .||+.|++
T Consensus 262 ~tG--fGRtG~~~a~~~~gv~P---Div--~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~--gnpl~~Aa 332 (456)
T PRK07480 262 ICG--FGRTGEWFGSQHFGIKP---DLM--TIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYS--GHPVAAAV 332 (456)
T ss_pred hhC--CCcCcchhhhhhcCCCC---Cee--eeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCCCCC--cCHHHHHH
Confidence 975 57777765 58899988 887 79999972 12345678899888742 1 2334444 58999999
Q ss_pred HHHHHHHHhcCcHHHHHH-HHHHHHHHHhhccCCCceee--cCCCCCEEEEEecCCCCCch---hhHHHHHHHHHHHHHh
Q 011567 356 AITAIDVLEENPDLITKL-KKNTAILRTGLSDIHGLSIA--SNPESPIVFLILEKSTGSMK---NDLQLLEDIADWALKE 429 (483)
Q Consensus 356 a~~al~~l~~~~~~~~~l-~~~~~~l~~~L~~~~~~~i~--~~~~~~i~~l~l~~~~~~~~---~~~~~~~~i~~~~l~~ 429 (483)
+.++|++++++ ++.+++ +++.++|++.|+++..+++. ....+.++.+.+..+..... ........+...+++
T Consensus 333 a~a~L~~l~~~-~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~- 410 (456)
T PRK07480 333 ALANLRILRDE-GIVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFA- 410 (456)
T ss_pred HHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHH-
Confidence 99999999875 488999 58999999998775333322 23457788888843321110 111223456666665
Q ss_pred CCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 430 DGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 430 ~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
+||++.+.. ..+|++|+..+|++|||++++++++++.++.+
T Consensus 411 ~Gll~~~~~----------~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 411 NGLIMRAVG----------DRMIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred CCcEEeecC----------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 599986521 23999999999999999999999999988643
No 63
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-38 Score=325.81 Aligned_cols=359 Identities=18% Similarity=0.215 Sum_probs=264.3
Q ss_pred cCCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcC-CCCCCCCCcccChHHHHHHHHHHHh
Q 011567 91 CEPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYG-VGSCGPRGFYGTIDVHLDCEARIAK 165 (483)
Q Consensus 91 ~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g-~g~~~~~~~~g~~~~~~~l~~~La~ 165 (483)
..|.++++++|.|+| +|||+||||.++ ..+|| +||+|.+|+++|+++.- ... ...+++...+|.++|++
T Consensus 44 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~ql~~~~~~~~-----~~~~~~~~~~la~~L~~ 117 (464)
T PRK06938 44 RIPLALKRARGIYVEDVEGRQFIDCLAGAGTLALGH-NHPVVIEAIQQVLADELPLHT-----LDLTTPVKDQFVQDLFA 117 (464)
T ss_pred CCCceEEeccccEEEeCCCCEEEEccCCccccccCC-CCHHHHHHHHHHHHhhhcccc-----cccCCHHHHHHHHHHHH
Confidence 347789999999999 899999999987 67999 89999999999997521 111 12245778899999999
Q ss_pred hhCCC-----CEEEe-cccHHHHHhhhhh---hccCCcEEEEcCCchhHHHhHhhhcCC------------eEEE--ecC
Q 011567 166 FLGTP-----DSILY-SYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRS------------TVVY--FKH 222 (483)
Q Consensus 166 ~~g~e-----~~i~~-~sG~~a~~~ai~~---~~~~gdiI~~~~~~h~s~~~g~~~s~~------------~v~~--~~~ 222 (483)
.++.+ ..+++ +||++|++.|++. +++|..+|.+...||+.+..++.+++. .+.. +++
T Consensus 118 ~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~ 197 (464)
T PRK06938 118 SLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPY 197 (464)
T ss_pred hCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCc
Confidence 87632 45566 6999999999764 568888999999999988777765432 1122 222
Q ss_pred C---------------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCc
Q 011567 223 N---------------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDES 283 (483)
Q Consensus 223 ~---------------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa 283 (483)
+ +.+.+++.+++... .+..+++|++||++.++|.+.| |++++++|++||++||+||+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~----~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV 273 (464)
T PRK06938 198 DYRCPFGLGGEAGVRANLHYLENLLDDPES----GVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEI 273 (464)
T ss_pred cccccccCchhhHHHHHHHHHHHHHHhhcc----CCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 2 14556666643211 1124899999999999888766 99999999999999999999
Q ss_pred cccccccCCCCcc-ccccCCCCCceeEEEccccccccCCCce----eeccHHHHHHHHhcCCceeecCCCcHHHHHHHHH
Q 011567 284 NSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALATEGGF----CTGSARVVDHQRLSSSGYVFSASLPPYLASAAIT 358 (483)
Q Consensus 284 ~s~g~lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~~GG~----i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~ 358 (483)
+++ +|++|.++ ++++|+.| ||+ +++|++| ||+ +++++++ +.+....++.+| +.||+.|+++++
T Consensus 274 ~tG--fGRtG~~~a~e~~gv~P---Div--~~gKglg--gG~PlsAv~~~~~~-~~~~~~~~~~T~--~gnpla~Aaa~a 341 (464)
T PRK06938 274 QSG--FGRTGKMFAFEHAGIIP---DVV--VLSKAIG--GSLPLAVVVYREWL-DTWQPGAHAGTF--RGNQMAMAAGSA 341 (464)
T ss_pred ccC--CCcCcHHHHHHhcCCCC---CEE--Eeecccc--CCCceEEEeehhHh-hccCCCCCCCCC--CcCHHHHHHHHH
Confidence 985 57777655 58999998 898 7999997 443 4566664 544333333444 459999999999
Q ss_pred HHHHHhcCcHHHHHHHHHHHHHHHhhccCC-Ccee--ecCCCCCEEEEEecCCCCCc------hhhHHHHHHHHHHHHHh
Q 011567 359 AIDVLEENPDLITKLKKNTAILRTGLSDIH-GLSI--ASNPESPIVFLILEKSTGSM------KNDLQLLEDIADWALKE 429 (483)
Q Consensus 359 al~~l~~~~~~~~~l~~~~~~l~~~L~~~~-~~~i--~~~~~~~i~~l~l~~~~~~~------~~~~~~~~~i~~~~l~~ 429 (483)
+|++++++ ++.+++++++++|++.|+++. .+++ .....+.++.+.+.++.... ..+......+...|++
T Consensus 342 ~L~~l~~~-~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 419 (464)
T PRK06938 342 TLRYIKEH-RLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLR- 419 (464)
T ss_pred HHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHH-
Confidence 99999764 589999999999999997752 2322 22456778888885432111 1122345667777765
Q ss_pred CCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 430 DGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 430 ~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
+|+++.+.... ...||+.|+..+|++|++++++++++++.++..
T Consensus 420 ~Gll~~~~g~~-------~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 463 (464)
T PRK06938 420 RGLILELGGRH-------GSVVRFLPPLIITAEQIDEVAEIFAEAVAAAVA 463 (464)
T ss_pred CCeEEeecCCC-------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 59998753210 133999999999999999999999999988654
No 64
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-38 Score=322.98 Aligned_cols=359 Identities=17% Similarity=0.229 Sum_probs=268.2
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| .||++||||.++ ..+|| +||+|.+|+.+|+++...... .+.+++...+|.++|++.+
T Consensus 35 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~Ai~~ql~~~~~~~~----~~~~~~~~~~lae~L~~~~ 109 (457)
T PRK05639 35 FPLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGY-SHPKLVKAVQEQVALIQHSMI----GYTHSERAIRVAEKLAEIS 109 (457)
T ss_pred CCceEEeeecCEEEeCCCCEEEECCcCHHhhccCC-CCHHHHHHHHHHHHhcccccc----CccCCHHHHHHHHHHHhhC
Confidence 47889999999999 899999999997 67999 899999999999998532111 1223577789999999998
Q ss_pred CC--CCEEEecccHHHHHhhhhh---hccCCcEEEEcCCchhHHHhHhhhcCC-------------eEEEecCCC-----
Q 011567 168 GT--PDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRS-------------TVVYFKHND----- 224 (483)
Q Consensus 168 g~--e~~i~~~sG~~a~~~ai~~---~~~~gdiI~~~~~~h~s~~~g~~~s~~-------------~v~~~~~~d----- 224 (483)
+. +.+.+.+||++|++.|++. +++|..+|.+...||+.+..++.+++. .+.++++++
T Consensus 110 p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 189 (457)
T PRK05639 110 PIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNP 189 (457)
T ss_pred CCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCcccccc
Confidence 64 4667779999999999754 568888999999999988766665431 133344432
Q ss_pred --------HHH--------HHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCcc
Q 011567 225 --------MDS--------LRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESN 284 (483)
Q Consensus 225 --------~~~--------Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~ 284 (483)
.++ +++.+.... ..+..+++|++||+++.+|.+.| |++|+++|++||++||+||++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~le~~l~~~~----~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~ 265 (457)
T PRK05639 190 WGINGYEEPDELINRFLDYLENYVFSHV----VPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQ 265 (457)
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHhh----cCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 222 222221110 01236999999999999888776 999999999999999999999
Q ss_pred ccccccCCCCcc-ccccCCCCCceeEEEccccccccC-C-CceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHH
Q 011567 285 SFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALAT-E-GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAID 361 (483)
Q Consensus 285 s~g~lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~-~-GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~ 361 (483)
+ | +|++|+++ .+++|+.| ||+ +++|++|. . -|++++++++++. ... .+.++.+.||+.|++++++|+
T Consensus 266 t-G-~GrtG~~~a~~~~gv~P---Div--~~gK~l~gG~pi~av~~~~~i~~~-~~~--~~~~T~~g~p~~~aaa~a~l~ 335 (457)
T PRK05639 266 T-G-IGRTGKWFASEWFEVKP---DLI--IFGKGVASGMGLSGVIGRKELMDL-TSG--SALLTPAANPVISAAAEATLE 335 (457)
T ss_pred h-c-cCcCchHHHHHhcCCCC---CEE--EechhhcCCCcceeEEehHHHHhh-cCC--CcccCCCcCHHHHHHHHHHHH
Confidence 8 4 78889875 48899987 898 59999972 1 2567889999883 222 233455679999999999999
Q ss_pred HHhcCcHHHHHHHHHHHHHHHhhccC-CCceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeec
Q 011567 362 VLEENPDLITKLKKNTAILRTGLSDI-HGLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSK 438 (483)
Q Consensus 362 ~l~~~~~~~~~l~~~~~~l~~~L~~~-~~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~ 438 (483)
.++++ ++.++.++++++|++.|+++ .++++. ....+.++.+.+..+... .+......+...+++ +|+++.+..
T Consensus 336 ~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~--~~~~~~~~~~~~~~~-~Gv~~~~~g 411 (457)
T PRK05639 336 IIEEE-NLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGK--PDPELTGKICWRAFE-LGLILPSYG 411 (457)
T ss_pred HHHHc-cHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCC--CCHHHHHHHHHHHHh-CCeEEeecC
Confidence 99875 48899999999999999874 233332 245677888877543221 123345677777665 599997542
Q ss_pred ccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 439 RSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 439 ~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
.. ...||+.|++.+|++|+|+++++++++++++..
T Consensus 412 ~~-------~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~~ 446 (457)
T PRK05639 412 MF-------GNVIRITPPLVITKEIAEKGLEIMERAIKDALA 446 (457)
T ss_pred CC-------CCEEEEeCCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 10 134999999999999999999999999988653
No 65
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.8e-38 Score=323.31 Aligned_cols=341 Identities=21% Similarity=0.323 Sum_probs=269.1
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.++| .||++||||.++ ++||+ +||++.+++.+++++++..+. .| ..+...+|+++|++++
T Consensus 25 ~~~~~~~~~G~~~~d~dg~~~lD~~s~~~~~~lG~-~~p~v~~ai~~~~~~~~~~~~----~~-~~~~~~~la~~l~~~~ 98 (398)
T PRK03244 25 PPLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGH-AHPAVVEAVTRQLATLGHVSN----LF-ATEPQIALAERLVELL 98 (398)
T ss_pred CCceEEEeeecEEEECCCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhccCccC----cc-CCHHHHHHHHHHHHhC
Confidence 35778999999999 899999999995 89999 799999999999999765321 23 2456689999999998
Q ss_pred CCC---CEEEecccHHHHHhhhhhhc--cCCcEEEEcCCchhHHHhHhhhcC------------CeEEEecCCCHHHHHH
Q 011567 168 GTP---DSILYSYGLSTMFSAIPCFC--KKGDLIVADEGVHWGIQNGLYLSR------------STVVYFKHNDMDSLRN 230 (483)
Q Consensus 168 g~e---~~i~~~sG~~a~~~ai~~~~--~~gdiI~~~~~~h~s~~~g~~~s~------------~~v~~~~~~d~~~Le~ 230 (483)
|.+ +++++++|++|+..+++... ++.++|.++..||+....++.+++ ..+..++++|++++++
T Consensus 99 ~~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 178 (398)
T PRK03244 99 GAPEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAA 178 (398)
T ss_pred CCCCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHH
Confidence 853 56677999999999988554 455888888999988776665544 2346677889999988
Q ss_pred HHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCcc-ccccCCCCC
Q 011567 231 TLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGL-TEHCGVPVD 305 (483)
Q Consensus 231 ~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~-~~~~~v~~~ 305 (483)
.+.. .+++|++||+++++|.+.| +++|+++|++||+++|+||+|++ +|++|+++ .+++++.|
T Consensus 179 ~~~~----------~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g--~gr~g~~~~~~~~~~~p- 245 (398)
T PRK03244 179 AVDD----------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTG--IGRTGAWFAHQHDGVTP- 245 (398)
T ss_pred hhcC----------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--CcccchHHhhhhhCCCC-
Confidence 7731 3789999999999999988 89999999999999999999984 67888764 36778877
Q ss_pred ceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHh
Q 011567 306 KIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTG 383 (483)
Q Consensus 306 ~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~ 383 (483)
|++ |+||++|+ +-|++++++++++.+......++| +.||+.++++.++|+.+++. +..++++++.++|++.
T Consensus 246 --Di~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~--~~~~~~~aaa~a~l~~~~~~-~~~~~~~~~~~~l~~~ 318 (398)
T PRK03244 246 --DVV--TLAKGLGGGLPIGACLAFGPAADLLTPGLHGSTF--GGNPVACAAALAVLDTIASE-GLLENAERLGEQLRAG 318 (398)
T ss_pred --CEE--EEchhhhCCcccEEEEEcHHHHhhccCCCCcCCC--CCCHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHH
Confidence 776 89999982 236777888888887654445555 45899999999999988754 5889999999999999
Q ss_pred hccCCCceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCH
Q 011567 384 LSDIHGLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSE 461 (483)
Q Consensus 384 L~~~~~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ 461 (483)
|+++ ++++. ....++++++.+..+ ...++.+++++ +||++.+.. ++.||++++..+|+
T Consensus 319 L~~~-~~~~~~~v~g~g~~~~i~~~~~---------~~~~~~~~l~~-~Gv~~~~~~---------~~~iR~~p~~~~t~ 378 (398)
T PRK03244 319 IEAL-GHPLVDHVRGRGLLLGIVLTAP---------VAKAVEAAARE-AGFLVNAVA---------PDVIRLAPPLIITD 378 (398)
T ss_pred HHhc-CCCceeeEeeccEEEEEEEecc---------HHHHHHHHHHH-CCeEEeecC---------CCEEEEECCCcCCH
Confidence 9886 44321 124677888887421 23467777665 599997642 14499999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011567 462 ADLVKACESLKRISAVV 478 (483)
Q Consensus 462 edi~~~~~~l~~~~~~~ 478 (483)
+||++++++|+++++++
T Consensus 379 ~~i~~~~~~l~~~l~~~ 395 (398)
T PRK03244 379 AQVDAFVAALPAILDAA 395 (398)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998764
No 66
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=9.7e-38 Score=319.47 Aligned_cols=374 Identities=14% Similarity=0.157 Sum_probs=273.0
Q ss_pred HHHHHHHhhcCCCCC-CcccccccccCCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCC
Q 011567 67 KEIDELCDEWVPESL-IPPIIEEMRCEPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGV 141 (483)
Q Consensus 67 ~e~~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~ 141 (483)
+++.+...+..|-.. .........+.|.++++++|.++| +||++||||.++ ..+|| +||+|.+|+.+++++. .
T Consensus 31 ~~l~~ra~~~~p~g~~~~~~~~~~~~~p~~~~~a~G~~v~D~DG~~yiD~~~g~g~~~lGh-~~p~i~~Av~~q~~~~-~ 108 (453)
T PRK07046 31 RALAARAAQHLLGGVPMHWMNDWPTPFPLFVAEARGARFTDVDGHRYDDFCLGDTGAMFGH-SPAPVARALAEQARRG-L 108 (453)
T ss_pred HHHHHHHHhhCCCCcccccccccCCCCCCeEEeeeeCEEEeCCCCEEEEecccccccccCC-CCHHHHHHHHHHHHhC-C
Confidence 345555556666654 111111112457889999999999 899999999886 57899 8999999999999973 2
Q ss_pred CCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhh--c---
Q 011567 142 GSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYL--S--- 213 (483)
Q Consensus 142 g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~--s--- 213 (483)
. +...++...+++++|++.++.+.+.+++||++|++.|++ ++++|..+|.+...||+.....+.. +
T Consensus 109 ~------~~~~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~ 182 (453)
T PRK07046 109 T------TMLPSEDAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRP 182 (453)
T ss_pred C------CCCCCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCC
Confidence 1 223467889999999999988888888999999999965 5778989999999999863222110 0
Q ss_pred -------C------CeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCc
Q 011567 214 -------R------STVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRF 276 (483)
Q Consensus 214 -------~------~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~ 276 (483)
+ ..+..+++||.+.+++.+.. . .+++|++||++++.|.+.| |++++++|++||+
T Consensus 183 ~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~--~-------~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~ 253 (453)
T PRK07046 183 VQRPGLLGQVHDLTATTRVVEFNDLAALEAALAD--G-------DVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGT 253 (453)
T ss_pred CCCCCCCCCCccccCceEeeCCCCHHHHHHHhCC--C-------CeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCC
Confidence 1 23466788999999988842 2 3899999999999998877 8999999999999
Q ss_pred EEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhc------CC-ceeecCC
Q 011567 277 RVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLS------SS-GYVFSAS 347 (483)
Q Consensus 277 ~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~------~~-~~~fs~~ 347 (483)
+||+||+++ +++|. .|..+++|+.| ||+ +++|++|. +.|.+++++++++.+... +. .+..+.+
T Consensus 254 llI~DEV~t-fr~g~--Gg~~~~~gv~P---Di~--t~gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~ 325 (453)
T PRK07046 254 LLVIDETHT-ISSGP--GGYTRAHGLEP---DFL--VVGKPIAGGVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLS 325 (453)
T ss_pred EEEEEcccc-CccCC--cchhHHhCCCc---cce--eehhhhcCCCcceeeeehHHHHHHHhhccccCCCCCceeCCCCc
Confidence 999999999 44554 24567889988 898 79999981 124467899999987531 11 1222335
Q ss_pred CcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccC---CCceeecCCCCCEEEEEecCCCC-Cch-----hhHHH
Q 011567 348 LPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDI---HGLSIASNPESPIVFLILEKSTG-SMK-----NDLQL 418 (483)
Q Consensus 348 ~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~---~~~~i~~~~~~~i~~l~l~~~~~-~~~-----~~~~~ 418 (483)
.||+.|++++++|+++++. +..++++++.++|++.|+++ .++.......+.++.+.+.+... ... .+...
T Consensus 326 gnpl~~aa~~a~L~~l~~~-~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~ 404 (453)
T PRK07046 326 ANALAMAAMRATLAEVMTE-AAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPEL 404 (453)
T ss_pred ccHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHH
Confidence 6999999999999999764 48999999999999999753 13332223345566776632211 100 02234
Q ss_pred HHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 419 LEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 419 ~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
...+...+++ +||++.+.. ..++++++ ||++|||+++++++++++++.
T Consensus 405 ~~~~~~~~~~-~Gv~~~~~~----------~~~~~~p~--~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 405 EAALHLYLLN-RGVLITPFH----------NMMLVCPA--TTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred HHHHHHHHHH-CCCEEeccc----------CcEEEeCC--CCHHHHHHHHHHHHHHHHHHh
Confidence 4566666665 599987531 12677764 999999999999999998764
No 67
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=8.3e-38 Score=320.81 Aligned_cols=363 Identities=16% Similarity=0.222 Sum_probs=263.8
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| .||++||||.++ ..+|| +||+|.+|+.+++.+. ....+ . ..+.+...+|+++|++.+
T Consensus 40 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH-~~p~v~~Ai~~q~~~~-~~~~~-~--~~~~~~~~~lAe~L~~~~ 114 (459)
T PRK06931 40 LPLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGH-NHPDVLQSIQDVLTSG-LPLHT-L--DLTTPLKDAFSEYLLSLL 114 (459)
T ss_pred CCceEEeccccEEEeCCCCEEEEcccchhhccCCC-CCHHHHHHHHHHHhhh-ccccc-c--ccCCHHHHHHHHHHHHhC
Confidence 46789999999999 899999999997 67999 8999999999999862 11111 1 124578889999999998
Q ss_pred CCC----CEEEe-cccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcCC------------eEEEecCCC---
Q 011567 168 GTP----DSILY-SYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHND--- 224 (483)
Q Consensus 168 g~e----~~i~~-~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~~------------~v~~~~~~d--- 224 (483)
+.. ..+++ +||++|++.|++ .+++|..+|.+...||+.+..++.+++. .+..++.+|
T Consensus 115 p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (459)
T PRK06931 115 PGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYR 194 (459)
T ss_pred CCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCcccc
Confidence 632 34566 899999999975 4678888999999999988777765432 122222222
Q ss_pred ----------HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCcccccccc
Q 011567 225 ----------MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLG 290 (483)
Q Consensus 225 ----------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg 290 (483)
.+.+++.+++...+....+.++++|++||+++++|.+.| |++|+++|++||++||+||++++ +|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tG--fG 272 (459)
T PRK06931 195 CPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAG--FA 272 (459)
T ss_pred ccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhc--CC
Confidence 233433333322111112345899999999999888766 99999999999999999999985 56
Q ss_pred CCCCcc-ccccCCCCCceeEEEccccccccCCCce----eeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc
Q 011567 291 RSGRGL-TEHCGVPVDKIDIVTAAMGHALATEGGF----CTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE 365 (483)
Q Consensus 291 ~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~~GG~----i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~ 365 (483)
++|.++ .+++|+.| ||+ +++|++| ||+ +++++++ +.+....++.+| +.||+.|++++++|+++++
T Consensus 273 RtG~~~a~~~~gv~P---Div--t~gK~l~--gG~Pi~av~~~~~~-~~~~~~~~~~T~--~gnpla~aaala~L~~l~~ 342 (459)
T PRK06931 273 RTGKMFAFEHAGIEP---DII--VMSKAVG--GGLPLAVLGIKKEF-DAWQPGGHTGTF--RGNQLAMATGLTTLKILKE 342 (459)
T ss_pred cCchHHHhhhcCCCC---CEE--Eeccccc--CCcceeeeeeHHHH-hhccCCCCCCCC--CCCHHHHHHHHHHHHHHHh
Confidence 777655 48999988 898 7999998 443 4455553 555333334444 4599999999999999987
Q ss_pred CcHHHHHHHHHHHHHHHhhccCC-Ccee--ecCCCCCEEEEEecCCCCC------chhhHHHHHHHHHHHHHhCCEEEEe
Q 011567 366 NPDLITKLKKNTAILRTGLSDIH-GLSI--ASNPESPIVFLILEKSTGS------MKNDLQLLEDIADWALKEDGVFVVT 436 (483)
Q Consensus 366 ~~~~~~~l~~~~~~l~~~L~~~~-~~~i--~~~~~~~i~~l~l~~~~~~------~~~~~~~~~~i~~~~l~~~Gv~v~~ 436 (483)
. ++.++++++.++|++.|+++. .+++ .....+.++.+.+..+... ...+......+...+++ +|+++.+
T Consensus 343 ~-~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~ 420 (459)
T PRK06931 343 E-NLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFE-NGLLLER 420 (459)
T ss_pred C-CHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHH-CCcEEee
Confidence 5 489999999999999997752 2222 2234677888888543211 11123345667777665 5999875
Q ss_pred ecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 437 SKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 437 ~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
.... +..+|+.|++.+|++|+++++++++++++++++
T Consensus 421 ~~~~-------~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 421 GGRN-------GNVVRLLPPLLITQAECEEFIDRFEQALLAAVK 457 (459)
T ss_pred cCCC-------CCEEEEECCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 3210 134999999999999999999999999998775
No 68
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=3.7e-38 Score=319.93 Aligned_cols=340 Identities=19% Similarity=0.237 Sum_probs=263.5
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.++| .||++||||.++ +++|| +||++.+|+.+++++....+ . ..+.+.+.+++++|+++.
T Consensus 13 ~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~---~--~~~~~~~~~la~~l~~~~ 86 (389)
T PRK01278 13 ADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWHVS---N--LYRIPEQERLAERLVENS 86 (389)
T ss_pred CCceEEeeecCEEEECCCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCccc---c--ccCChHHHHHHHHHHhhC
Confidence 46788999999999 899999999995 89999 89999999999999732211 1 125678899999999999
Q ss_pred CCCCEEEecccHHHHHhhhhhh---------ccCCcEEEEcCCchhHHHhHhhhcCCe------------EEEecCCCHH
Q 011567 168 GTPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHNDMD 226 (483)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~~~---------~~~gdiI~~~~~~h~s~~~g~~~s~~~------------v~~~~~~d~~ 226 (483)
+.+++++++||++|++.++++. ++|.++|..+..||+.+..++..++.. +..++++|++
T Consensus 87 ~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 166 (389)
T PRK01278 87 FADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIE 166 (389)
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHH
Confidence 8788888899999999998776 445578899999999887777655432 2346778999
Q ss_pred HHHHHHHHhhhhhhhccCccEEEEEecccCCCCCcc-C---hHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cccC
Q 011567 227 SLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIA-P---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EHCG 301 (483)
Q Consensus 227 ~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~-~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~~~ 301 (483)
++++.++. ++++|++||+++++|... | +++|+++|++||++||+||+|++ +|++|+++. ++++
T Consensus 167 ~l~~~l~~----------~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g--~g~~g~~~~~~~~~ 234 (389)
T PRK01278 167 ALKAAITP----------NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCG--MGRTGKLFAHEWAG 234 (389)
T ss_pred HHHHhhCC----------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcCCcceeecccC
Confidence 99887743 378999999999888544 3 99999999999999999999984 577777554 6778
Q ss_pred CCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q 011567 302 VPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAI 379 (483)
Q Consensus 302 v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~ 379 (483)
+.| |++ |++|++++ +.|++++++++++.+....++.+|+ .||+.++++.++++.+++. +..++++++.++
T Consensus 235 ~~p---di~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l~~l~~~-~~~~~~~~~~~~ 306 (389)
T PRK01278 235 VTP---DIM--AVAKGIGGGFPLGACLATEEAAKGMTPGTHGSTYG--GNPLAMAVGNAVLDVILAP-GFLDNVQRMGLY 306 (389)
T ss_pred CCC---CEE--EEehhccCCcceEEEEEcHHHHhccCCCCCCCCCC--ccHHHHHHHHHHHHHHhhh-HHHHHHHHHHHH
Confidence 876 765 89999973 2477888899988876555555554 5899999999999988653 577888888888
Q ss_pred HHHhhccCC-Cce-ee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEc
Q 011567 380 LRTGLSDIH-GLS-IA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFV 455 (483)
Q Consensus 380 l~~~L~~~~-~~~-i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~ 455 (483)
+++.|+++. ..+ +. ..+.+.++++.+.. ...+++.+++++ ||++.+.. ...|||++
T Consensus 307 l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~----------~~~~~~~~l~~~-GV~~~p~~---------~~~lR~~p 366 (389)
T PRK01278 307 LKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVV----------PNRDLVQALRDE-GLLTVGAG---------DNVVRLLP 366 (389)
T ss_pred HHHHHHHHHhhCCCceeeEecccEEEEEEEec----------CHHHHHHHHHHC-CeEEeecC---------CCEEEEeC
Confidence 888886541 111 11 12345666666531 134677777765 99987652 13499999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHH
Q 011567 456 SAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 456 ~~~~t~edi~~~~~~l~~~~~~ 477 (483)
+..+|++++++++++|++++.+
T Consensus 367 ~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 367 PLIITEEEIDEALERLERAAES 388 (389)
T ss_pred CcccCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999988764
No 69
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=5.7e-38 Score=320.60 Aligned_cols=355 Identities=17% Similarity=0.212 Sum_probs=263.5
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|+++++++|.|+| .||++||||.++ ..+|| +||+|.+|+++|+++.+.... ...+.+...+|.++|++.+
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~~~~~~~----~~~~~~~~~~lae~l~~~~ 95 (425)
T PRK09264 21 FPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGH-NNPVLKQALIDYLQRDGITHG----LDMHTTAKREFLETFEETI 95 (425)
T ss_pred CCccEEeeecCEEEeCCCCEeeecccchhhccCCC-CCHHHHHHHHHHHHhcccccc----cccCcHHHHHHHHHHHHhh
Confidence 46789999999999 899999999997 67999 899999999999997543221 1123567889999999975
Q ss_pred C----CC-CEEEe-cccHHHHHhhhhh---hccCCcEEEEcCCchhHHHhHhhhcCC------------eEEEecC----
Q 011567 168 G----TP-DSILY-SYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKH---- 222 (483)
Q Consensus 168 g----~e-~~i~~-~sG~~a~~~ai~~---~~~~gdiI~~~~~~h~s~~~g~~~s~~------------~v~~~~~---- 222 (483)
. .+ ..+++ +||++|++.|++. +++|..+|.+..+||+.+..++.+++. .+..+++
T Consensus 96 ~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~ 175 (425)
T PRK09264 96 LKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYF 175 (425)
T ss_pred cCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCcc
Confidence 2 33 34455 7999999999754 568888999999999988776665431 2333443
Q ss_pred ----CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCC
Q 011567 223 ----NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGR 294 (483)
Q Consensus 223 ----~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~ 294 (483)
+|++++++.+++... .+..+++|++||+++++|.+.+ |++|+++|++||++||+||++++ +|++|+
T Consensus 176 ~~~~~~~~~l~~~l~~~~~----~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG--~GrtG~ 249 (425)
T PRK09264 176 GGDVDTLAYLEKLLEDSSS----GVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAG--CGRTGT 249 (425)
T ss_pred ccchhHHHHHHHHHHhccC----CCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhC--CccccH
Confidence 467788888865321 1124899999999999887553 99999999999999999999985 788887
Q ss_pred cc-ccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHH
Q 011567 295 GL-TEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLI 370 (483)
Q Consensus 295 g~-~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~ 370 (483)
++ .+++++.| ||+ +++|++|+.| |++++++++ +.+....++.+| +.+|+.++++.++++.+.+.+++.
T Consensus 250 ~~~~~~~~v~P---Di~--t~~K~l~~~G~pigav~~~~~i-~~~~~~~~~~T~--~gnp~~~aaa~a~l~~~~~~~~l~ 321 (425)
T PRK09264 250 FFSFERAGITP---DIV--TLSKSISGYGLPMALVLIKPEL-DVWKPGEHNGTF--RGNNLAFVTATAALEEYWSDDAFE 321 (425)
T ss_pred HHHHhhcCCCC---CEE--EeccccCCCccceEEEEEchhh-hccCCCccCCCC--CCCHHHHHHHHHHHHHHHhhhHHH
Confidence 65 47889887 776 7899998544 677788776 343322233344 357999999999994333335689
Q ss_pred HHHHHHHHHHHHhhccCC-Cce---eecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCC
Q 011567 371 TKLKKNTAILRTGLSDIH-GLS---IASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCR 446 (483)
Q Consensus 371 ~~l~~~~~~l~~~L~~~~-~~~---i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~ 446 (483)
++++++.+++++.|+++. .++ ......+.++++.+.+ .....+++..+++ +||++.+....
T Consensus 322 ~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~--------~~~~~~l~~~~~~-~Gv~~~~~~~~------ 386 (425)
T PRK09264 322 KEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGD--------GELAGKIAAEAFE-NGLIIETSGPE------ 386 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecC--------hHHHHHHHHHHHH-CCCEEeccCCC------
Confidence 999999999999886642 122 1123457788888842 2334567776665 59998764221
Q ss_pred CCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011567 447 LPVGIRLFVSAAHSEADLVKACESLKRISAVVLRD 481 (483)
Q Consensus 447 ~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~ 481 (483)
...||++|+..+|++||++++++|+++++++..+
T Consensus 387 -~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~~~ 420 (425)
T PRK09264 387 -DEVVKLLPPLTIDEEELEEGLDILEEAVAEVLAE 420 (425)
T ss_pred -CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 1349999999999999999999999999887654
No 70
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=100.00 E-value=1.7e-37 Score=310.79 Aligned_cols=348 Identities=36% Similarity=0.613 Sum_probs=279.8
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhh
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPC 188 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~ 188 (483)
|+|++|++++|||+..||++.+++++.+++|+.+..+.+...|..+...++++.+++++|.++.+++++|++++..++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~~ 80 (349)
T cd06454 1 KKVLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLST 80 (349)
T ss_pred CCceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHHH
Confidence 57999999999999889999999999999987655555666678899999999999999999899999999999988999
Q ss_pred hccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHH
Q 011567 189 FCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELI 268 (483)
Q Consensus 189 ~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~ 268 (483)
++++||.|++++++|.++..++...|.+++.++..|.+++++++++... +.++++|+++++++++|.+.|+++|+
T Consensus 81 ~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~-----~~~~~~v~~~~~~~~tG~~~~~~~i~ 155 (349)
T cd06454 81 LAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKHNDMEDLEKLLREARR-----PYGKKLIVTEGVYSMDGDIAPLPELV 155 (349)
T ss_pred hcCCCCEEEEehhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHHhhc-----cCCCeEEEEeccccCCCCccCHHHHH
Confidence 9999999999999999999888989999988888899999998876431 12468999999999999999999999
Q ss_pred HHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCCceeeccHHHHHHHHhcCCceeecCCC
Q 011567 269 RLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSASL 348 (483)
Q Consensus 269 ~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~~~~~~~~~~~~~~~fs~~~ 348 (483)
++|++||+++|+||+|+.|.++..|.+. .++.....+.|++++|++|++++.||++++++++++.++.....+.++++.
T Consensus 156 ~~~~~~~~~livD~a~~~g~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~gG~i~~~~~~~~~~~~~~~~~~~~~~~ 234 (349)
T cd06454 156 DLAKKYGAILFVDEAHSVGVYGPHGRGV-EEFGGLTDDVDIIMGTLGKAFGAVGGYIAGSKELIDYLRSYARGFIFSTSL 234 (349)
T ss_pred HHHHHcCCEEEEEccccccccCCCCCCh-hhhccccccCcEEEeechhhhcccCCEEECCHHHHHHHHHhchhhhccCCC
Confidence 9999999999999999988776544432 223333456799999999999988999999999988877655555566667
Q ss_pred cHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHH
Q 011567 349 PPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALK 428 (483)
Q Consensus 349 ~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~ 428 (483)
++..++++.++++.+.+.....++++++.+++.+.|.++ ++++..++.+.+..+.+.+ .....++.+.+++
T Consensus 235 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~L~~ 305 (349)
T cd06454 235 PPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL-GFPVGGSPSHIIPPLIGDD--------PAKAVAFSDALLE 305 (349)
T ss_pred CHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCcEEEEeCCC--------hHHHHHHHHHHHh
Confidence 888888888999887664567889999999999999886 7776654444444443321 1223567776655
Q ss_pred hCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 429 EDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 429 ~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
+||.+.+..++.... ....+|++++..+|++|+++++++|+++
T Consensus 306 -~gI~~~~~~~~~~~~--~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 306 -RGIYVQAIRYPTVPR--GTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred -CCceEEEecCCccCC--CCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 499998754432110 0245999999999999999999999864
No 71
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-37 Score=318.50 Aligned_cols=358 Identities=18% Similarity=0.218 Sum_probs=268.8
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| .||++||||.++ ..+|| +||+|.+|+.+|+.+....+. .+.+++...+|.++|++.+
T Consensus 23 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~ql~~~~~~~~----~~~~~~~~~~la~~L~~~~ 97 (443)
T PRK08360 23 YPLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGH-NNPRVVKAIKEQTDKLIHYTP----IYGFPVEPLLLAEKLIEIA 97 (443)
T ss_pred CCceEEecceeEEEECCCCEEEEccccHhhcccCC-CCHHHHHHHHHHHHhccCccc----cccCcHHHHHHHHHHHHhC
Confidence 37789999999999 899999999997 67999 899999999999998533211 2334677899999999998
Q ss_pred CC--CCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcCC------------eEEEecCCC------
Q 011567 168 GT--PDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHND------ 224 (483)
Q Consensus 168 g~--e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~~------------~v~~~~~~d------ 224 (483)
+. +.+++.+||++|+++|++ .+++|..+|.+...||+....++.+++. .+..+++++
T Consensus 98 p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (443)
T PRK08360 98 PGDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPF 177 (443)
T ss_pred CCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccc
Confidence 64 456666999999999975 4678888999999999987666655442 122222222
Q ss_pred -----------HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccc
Q 011567 225 -----------MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVL 289 (483)
Q Consensus 225 -----------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~l 289 (483)
.+.+++.++... .+.++++|++||+++++|.+.| +++|+++|++||+++|+||+|++ +
T Consensus 178 ~~~~~~~~~~~~~~~~~~l~~~~-----~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g--~ 250 (443)
T PRK08360 178 GKEPGSCKMECVEYIKEKFEGEV-----YAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSG--L 250 (443)
T ss_pred cCchhhhHHHHHHHHHHHHHhcc-----CCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--C
Confidence 233444443311 1125899999999999998776 89999999999999999999985 6
Q ss_pred cCCCCcc-ccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcC
Q 011567 290 GRSGRGL-TEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEEN 366 (483)
Q Consensus 290 g~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~ 366 (483)
|++|+++ .+++++.| |++ ++||++|+ +.|++++++++++.+.... +.++.+.+|+.++++.++|+.+++.
T Consensus 251 gr~G~~~a~~~~~~~p---Dii--tlsK~l~~G~pigav~~~~~i~~~~~~~~--~~~T~~~~p~~~aaa~a~l~~l~~~ 323 (443)
T PRK08360 251 GRTGKWFAIEHFGVEP---DII--TLGKPLGGGLPISATIGRAEIMDSLPPLA--HAFTLSGNPVASAAALAVIEEIEEK 323 (443)
T ss_pred CcCccchhhhhcCCCC---CEE--EecccccCCceeEEEEEcHHHHhhhcCCC--CCCCCCcCHHHHHHHHHHHHHHHHc
Confidence 7777765 46788877 776 78999983 2478899999999886443 3445556899999999999999765
Q ss_pred cHHHHHHHHHHHHHHHhhccCC-Cceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccc
Q 011567 367 PDLITKLKKNTAILRTGLSDIH-GLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLD 443 (483)
Q Consensus 367 ~~~~~~l~~~~~~l~~~L~~~~-~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~ 443 (483)
++.++++++.++|++.|+++. .+++. ..+.+.++.+.+.++......+......+...+++ +|+++.+...
T Consensus 324 -~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~---- 397 (443)
T PRK08360 324 -NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWE-LGLIVTFFSG---- 397 (443)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHH-CCeEEeecCC----
Confidence 489999999999999987641 22222 23467788888754322111223345577777665 5999865321
Q ss_pred cCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 444 KCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 444 ~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
..+|++|++.+|++||++++++++++++++-
T Consensus 398 -----~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~ 428 (443)
T PRK08360 398 -----NVLRIQPPLTIEKEVLDEGLDILEEAIEDVE 428 (443)
T ss_pred -----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3499999999999999999999999998753
No 72
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-37 Score=318.23 Aligned_cols=354 Identities=21% Similarity=0.282 Sum_probs=264.5
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| .||++||||.++ ..+|| +||+|.+|+.+++++....+.. ...++...+|+++|++.+
T Consensus 36 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~ql~~~~~~~~~----~~~~~~~~~lAe~L~~~~ 110 (441)
T PRK05769 36 YPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGH-AHPKVVKAVKEQAEKFLHYSLT----DFYYEPAVELAERLVEIA 110 (441)
T ss_pred CCeeEEecceEEEEeCCCCEEEECCCchhhcccCC-CCHHHHHHHHHHHHhccCccCc----ccCCHHHHHHHHHHHHhC
Confidence 47789999999999 899999999997 67999 8999999999999985432111 113567889999999988
Q ss_pred C---CCCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcCC-------------eEEEecC------
Q 011567 168 G---TPDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRS-------------TVVYFKH------ 222 (483)
Q Consensus 168 g---~e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~~-------------~v~~~~~------ 222 (483)
+ .+.+++.+||++|++.|++ .+++|..+|.+..+||+.+...+.+++. .+..+++
T Consensus 111 p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (441)
T PRK05769 111 PGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRN 190 (441)
T ss_pred CCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccc
Confidence 6 3566667999999999975 4678888999999999988776665432 1222222
Q ss_pred --C--CH--------HHHHH-HHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccc
Q 011567 223 --N--DM--------DSLRN-TLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNS 285 (483)
Q Consensus 223 --~--d~--------~~Le~-~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s 285 (483)
+ |. +.+|+ +++... .+..+++|++||+++++|.+.| |++|+++|++||+++|+||+++
T Consensus 191 ~~~~~~~~~~~~~~~~~le~~~~~~~~-----~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t 265 (441)
T PRK05769 191 PWGIENPEECGNAVLDFIEDYLFKKLV-----PPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT 265 (441)
T ss_pred cccCCchHHHHHHHHHHHHHHHHhhcc-----CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 1 22 22333 222100 1235899999999999999988 9999999999999999999998
Q ss_pred cccccCCCCcc-ccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHH
Q 011567 286 FGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDV 362 (483)
Q Consensus 286 ~g~lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~ 362 (483)
+ +|++|+++ .+++|+.| |++ +++|++|. +.|++++++++++.. ...++.+|+ .+|+.++++.++|++
T Consensus 266 G--~gr~G~~~a~~~~gv~p---Div--t~~K~l~~G~p~gav~~~~~i~~~~-~~~~~~T~~--g~p~~~aaa~a~L~~ 335 (441)
T PRK05769 266 G--MGRTGKMFAIEHFGVEP---DII--TLAKAIAGGLPLGAVIGRAELMFLP-PGSHANTFG--GNPVAAAAALATLEE 335 (441)
T ss_pred C--CCcccceehhhccCCCC---CEE--EEcccccCCcccEEEEEehhhhhcC-CCCCCCCCC--cCHHHHHHHHHHHHH
Confidence 4 67888775 47889887 887 69999973 246788888887543 233444554 489999999999999
Q ss_pred HhcCcHHHHHHHHHHHHHHHhhccCC-Cceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecc
Q 011567 363 LEENPDLITKLKKNTAILRTGLSDIH-GLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKR 439 (483)
Q Consensus 363 l~~~~~~~~~l~~~~~~l~~~L~~~~-~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~ 439 (483)
+++ ++.+++++++++|++.|+++. .+++. ....+.++.+.+.++. .+.+......+...+++ +||++.+...
T Consensus 336 l~~--~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~--~~~~~~~~~~~~~~~~~-~Gil~~~~~~ 410 (441)
T PRK05769 336 LEE--GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDR--KEPDPKLRDKVLYEAFK-RGLLLLGAGK 410 (441)
T ss_pred HHH--HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCC--ccccHHHHHHHHHHHHh-CCcEEecCCC
Confidence 987 689999999999999997652 13322 2345678888874332 11123345667777665 5999865321
Q ss_pred cccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 440 SMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 440 ~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
..||++|+..+|++|||++++++++++.+++
T Consensus 411 ---------~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 441 (441)
T PRK05769 411 ---------SAIRIIPPLIITEEEADIGLEILEEAIKELL 441 (441)
T ss_pred ---------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 3499999999999999999999999998753
No 73
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=9.4e-38 Score=319.34 Aligned_cols=352 Identities=20% Similarity=0.291 Sum_probs=269.4
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.++| .||++||||.++ .++|| +||+|.+++.+++++ +.+ .+...+...+|+++|++.+
T Consensus 32 ~~~~~~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh-~~p~i~~a~~~~~~~-~~~------~~~~~~~~~~la~~L~~~~ 103 (426)
T PRK00062 32 TPRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGH-AHPEVVEAVIEAAEK-GLS------FGAPTELEVELAELVIELV 103 (426)
T ss_pred CCeEEEeCcCCEEEeCCCCEEEEcccchhhhhcCC-CCHHHHHHHHHHHHh-CCc------CCCCCHHHHHHHHHHHHhC
Confidence 35678999999999 899999999997 68999 899999999999988 331 2334577889999999987
Q ss_pred -CCCCEEEecccHHHHHhhhhh---hccCCcEEEEcCCchhHHHhHhhhc-------------C------CeEEEecCCC
Q 011567 168 -GTPDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLS-------------R------STVVYFKHND 224 (483)
Q Consensus 168 -g~e~~i~~~sG~~a~~~ai~~---~~~~gdiI~~~~~~h~s~~~g~~~s-------------~------~~v~~~~~~d 224 (483)
+.+++++++||++|++.|++. ++++.++|.++..||+.+......+ + .....++|+|
T Consensus 104 ~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 183 (426)
T PRK00062 104 PSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYND 183 (426)
T ss_pred CCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCC
Confidence 456777779999999999876 5677889999999998763322221 1 1245678899
Q ss_pred HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCcccccc
Q 011567 225 MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHC 300 (483)
Q Consensus 225 ~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~ 300 (483)
++++++.++.... .+++|++||+++++|.+.| |++|+++|++||+++|+||+|++.+.| +.+..+++
T Consensus 184 ~~~l~~~i~~~~~-------~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g--~~~~~~~~ 254 (426)
T PRK00062 184 LEAVEELFEEYGD-------EIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVA--LGGAQGYY 254 (426)
T ss_pred HHHHHHHHHhCCC-------cEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccC--CccHHHHh
Confidence 9999998865322 4899999999999999998 999999999999999999999854443 24556788
Q ss_pred CCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecC-CCcHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Q 011567 301 GVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSA-SLPPYLASAAITAIDVLEENPDLITKLKKNT 377 (483)
Q Consensus 301 ~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~-~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~ 377 (483)
++.| |++ +++|++++ +.|++++++++++.++..+..+.+++ +.+|..++++.++|+.++++ ++.++++++.
T Consensus 255 ~~~p---Di~--~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~-~~~~~~~~~~ 328 (426)
T PRK00062 255 GVTP---DLT--TLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEP-GFYEELEALT 328 (426)
T ss_pred CCCc---chH--hhhhHhhCCCcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcc-hHHHHHHHHH
Confidence 8877 765 89999973 24667889999998864443445443 67899999999999999765 5899999999
Q ss_pred HHHHHhhccC---CCceeecCCCCCEEEEEecCCCCC-----chhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCC
Q 011567 378 AILRTGLSDI---HGLSIASNPESPIVFLILEKSTGS-----MKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPV 449 (483)
Q Consensus 378 ~~l~~~L~~~---~~~~i~~~~~~~i~~l~l~~~~~~-----~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~ 449 (483)
+++++.|+++ .++.....+.+.++.+.+.++... ...+......+...+++ +||++.+..++
T Consensus 329 ~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~Gv~v~~~~~~--------- 398 (426)
T PRK00062 329 KRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLD-EGVYLAPSQFE--------- 398 (426)
T ss_pred HHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHH-CCeEeecCCcC---------
Confidence 9999988753 144333345788888888543111 01123345577877665 59999775433
Q ss_pred ceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 450 GIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 450 ~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
.+++ ++.+|++||++++++++++++++
T Consensus 399 ~~~~--~~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 399 AGFV--SAAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred ceee--eccCCHHHHHHHHHHHHHHHHhh
Confidence 2555 47899999999999999998754
No 74
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-37 Score=316.44 Aligned_cols=357 Identities=17% Similarity=0.206 Sum_probs=266.0
Q ss_pred CCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC
Q 011567 93 PPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (483)
Q Consensus 93 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g 168 (483)
|+++++++|.|+| .||++||||.++ ..+|| +||+|.+|+.+++++....+. .....+...++.++|++.++
T Consensus 23 p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~l~~~~~----~~~~~~~~~~la~~l~~~~p 97 (425)
T PRK07495 23 QIYADRAENAEIWDKEGRRYIDFAAGIAVVNTGH-RHPRVIAAVKAQLDRFTHTCH----QVVPYENYVRLAERLNALVP 97 (425)
T ss_pred CeeEEeeeecEEEeCCCCEEEEccccHHhhccCC-CCHHHHHHHHHHHhhccCccc----CccCCHHHHHHHHHHHHhCC
Confidence 6789999999999 899999999997 67999 899999999999998542111 12245778899999999986
Q ss_pred C---CCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcCC-------------eEEEecCCC-----
Q 011567 169 T---PDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRS-------------TVVYFKHND----- 224 (483)
Q Consensus 169 ~---e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~~-------------~v~~~~~~d----- 224 (483)
. +.+++.+||++|++.|++ .+++|..+|.+...||+.+..++.+++. .+..++.++
T Consensus 98 ~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 177 (425)
T PRK07495 98 GDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGV 177 (425)
T ss_pred CCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccc
Confidence 3 456666999999999976 4568888999999999987766655432 122333332
Q ss_pred -----HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCc
Q 011567 225 -----MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRG 295 (483)
Q Consensus 225 -----~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g 295 (483)
.+++++.+++.. .+...++|++||+++++|.+.| +++|+++|++||+++|+||++++ +|++|.+
T Consensus 178 ~~~~~~~~l~~~~~~~~-----~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG--~gr~G~~ 250 (425)
T PRK07495 178 SVEQSLAALDKLFKADV-----DPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTG--FARTGKL 250 (425)
T ss_pred cHHHHHHHHHHHHHhcc-----CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhc--CCcCCCc
Confidence 334455554210 1125899999999999886644 89999999999999999999984 6778865
Q ss_pred c-ccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHH
Q 011567 296 L-TEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITK 372 (483)
Q Consensus 296 ~-~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~ 372 (483)
+ .+++++.| ||+ ||+|++++ +.|++++++++++.+.......+| +.||+.++++.++++++++. ++.++
T Consensus 251 ~a~~~~gv~p---Di~--tlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~--~~~pl~~aaa~a~l~~l~~~-~l~~~ 322 (425)
T PRK07495 251 FAMEHHEVAA---DLT--TMAKGLAGGFPLAAVTGRAEIMDAPGPGGLGGTY--GGNPLGIAAAHAVLDVIEEE-DLCER 322 (425)
T ss_pred eeecccCCCC---CEE--eehhhhcCCccceEEEEcHHHHhccCCCCcCCCC--CCCHHHHHHHHHHHHHHHhc-hHHHH
Confidence 4 57788877 886 89999972 246688899999887654444444 56899999999999999764 58999
Q ss_pred HHHHHHHHHHhhccCC-Cceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCC
Q 011567 373 LKKNTAILRTGLSDIH-GLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPV 449 (483)
Q Consensus 373 l~~~~~~l~~~L~~~~-~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~ 449 (483)
+++++++|++.|+++. .++.. ....+.++++.+.++.. ...+......+...+++ +|+++...... .+
T Consensus 323 ~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~-~~~~~~~~~~~~~~~~~-~Gvl~~~~g~~-------~~ 393 (425)
T PRK07495 323 ANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDADS-GLPSAEFANRVRLKALE-KGLILLTCGVH-------GN 393 (425)
T ss_pred HHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCCC-CCccHHHHHHHHHHHHH-CCeEEeecCCC-------CC
Confidence 9999999999987652 12221 12457788888854321 11223345567776665 59998653210 13
Q ss_pred ceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 450 GIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 450 ~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
.|||.|++.+|++|+|+++++|+++++++
T Consensus 394 ~~r~~Ppl~it~~~id~~~~~l~~~l~~~ 422 (425)
T PRK07495 394 VIRFLAPITIQDDVFAEALDILEASILEA 422 (425)
T ss_pred EEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 49999999999999999999999999875
No 75
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=9.9e-38 Score=318.21 Aligned_cols=341 Identities=21% Similarity=0.256 Sum_probs=265.4
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| +||++||||.++ ..+|| +||+|.+++.+++++++.++. .+ ..+.+.+|+++|++++
T Consensus 23 ~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~~Gh-~~~~i~~a~~~~~~~~~~~~~---~~--~~~~~~~l~~~l~~~~ 96 (401)
T PRK00854 23 LDVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGH-CHPKILAAMVEQAGRLTLTSR---AF--RNDQLAPLYEELAALT 96 (401)
T ss_pred CCceEEeeeeCEEEECCCCEEEEcCcchhhccCCC-CCHHHHHHHHHHHhhcccccc---cc--CCHHHHHHHHHHHhhC
Confidence 35678999999999 799999999886 56899 899999999999999765332 22 2468899999999999
Q ss_pred CCCCEEEecccHHHHHhhhhhhc-----------cCCcEEEEcCCchhHHHhHhhhcC------------CeEEEecCCC
Q 011567 168 GTPDSILYSYGLSTMFSAIPCFC-----------KKGDLIVADEGVHWGIQNGLYLSR------------STVVYFKHND 224 (483)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~~~~-----------~~gdiI~~~~~~h~s~~~g~~~s~------------~~v~~~~~~d 224 (483)
|.+.+++++||++|++.|++++. ++.++|.++..+|+++...+.+++ ..+..++++|
T Consensus 97 ~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 176 (401)
T PRK00854 97 GSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGD 176 (401)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCCC
Confidence 99999999999999999998773 345789999999998765543221 2456788999
Q ss_pred HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cc
Q 011567 225 MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EH 299 (483)
Q Consensus 225 ~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~ 299 (483)
++++++.+.+ ++++|++|++++++|.+.| |++|+++|++||+++|+||+|+ | +|++|.++. ++
T Consensus 177 ~~~le~~i~~----------~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g-~g~~g~~~~~~~ 244 (401)
T PRK00854 177 AEALEAAITP----------NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-G-LGRTGKLLAEEH 244 (401)
T ss_pred HHHHHHHhCC----------CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCCCchHhHHhh
Confidence 9999987742 3789999999999999987 9999999999999999999998 3 577776554 46
Q ss_pred cCCCCCceeEEEccccccccC---CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHH
Q 011567 300 CGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKN 376 (483)
Q Consensus 300 ~~v~~~~~Di~~~s~~K~lg~---~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~ 376 (483)
+++.| |+++ ++|+++. ++|++++++++++.++....+.+|+ .+|+.++++.++|+.+++. ++.++++++
T Consensus 245 ~g~~~---D~~~--~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~t~~--~~~~~~aa~~a~L~~l~~~-~~~~~~~~~ 316 (401)
T PRK00854 245 EGIEA---DVTL--IGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFG--GNPLACAVARAALKVLTEE-GMIENAAEM 316 (401)
T ss_pred cCCCC---CEEE--ecccccCCccCeEEEEEcHHHHhcccCCCCCCCCC--cCHHHHHHHHHHHHHHHHc-CHHHHHHHH
Confidence 77766 7774 6799962 2456889999998876544444554 4899999999999988764 478999999
Q ss_pred HHHHHHhhccCCCceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEE
Q 011567 377 TAILRTGLSDIHGLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLF 454 (483)
Q Consensus 377 ~~~l~~~L~~~~~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~ 454 (483)
++++.+.|+++ +.... ..+.+.++.+.+..+. ....++++.+++ +||++.+.. +..||++
T Consensus 317 ~~~l~~~L~~~-~~~~~~~~~g~g~~~~i~~~~~~-------~~~~~~~~~L~~-~GV~v~~~~---------~~~lR~~ 378 (401)
T PRK00854 317 GAYFLEGLRSI-RSNIVREVRGRGLMLAVELEPEA-------GGARQYCEALKE-RGLLAKDTH---------DHTIRLA 378 (401)
T ss_pred HHHHHHHHHhh-ccCceEEEeccceEEEEEEecCc-------hhHHHHHHHHHH-CCeEEecCC---------CCEEEEe
Confidence 99999999876 32211 1345667766653211 123467777665 599986421 1349999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHH
Q 011567 455 VSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 455 ~~~~~t~edi~~~~~~l~~~~~ 476 (483)
++..+|++||++++++|++++.
T Consensus 379 p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 379 PPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred CCcccCHHHHHHHHHHHHHHhh
Confidence 9999999999999999998764
No 76
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=7.1e-38 Score=320.23 Aligned_cols=365 Identities=18% Similarity=0.211 Sum_probs=265.9
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| .||++||||.++ ..+|| +||+|.+++++++++......+ . .+++...+|+++|++.+
T Consensus 12 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~av~~ql~~~~~~~~~---~-~~~~~~~~lae~L~~~~ 86 (443)
T PRK07483 12 TLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGH-SHPRVIAAIHAQIDRLAYAHTS---F-FTTEPAEALADRLVAAA 86 (443)
T ss_pred CCceEEeceEEEEEeCCCCEEEEcCccHhhhccCC-CCHHHHHHHHHHHHhccCcccc---c-cCCHHHHHHHHHHHHhC
Confidence 47889999999999 899999999996 77999 8999999999999985321111 1 24577889999999987
Q ss_pred C--CCCEEEecccHHHHHhhhhh---h------ccCCcEEEEcCCchhHHHhHhhhcCCeE------------EEe----
Q 011567 168 G--TPDSILYSYGLSTMFSAIPC---F------CKKGDLIVADEGVHWGIQNGLYLSRSTV------------VYF---- 220 (483)
Q Consensus 168 g--~e~~i~~~sG~~a~~~ai~~---~------~~~gdiI~~~~~~h~s~~~g~~~s~~~v------------~~~---- 220 (483)
+ .+.+++.+||++|++.|++. + ++|..+|.+...||+.+..++.+++... ..+
T Consensus 87 p~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~ 166 (443)
T PRK07483 87 PAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCY 166 (443)
T ss_pred CCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCc
Confidence 5 35667779999999999764 3 3466789999999999877776654211 111
Q ss_pred cCCCH--------------HHHHHHHHHhhhhhhhccCccEEEEEecccC-CCCCccC----hHHHHHHHHHcCcEEEEe
Q 011567 221 KHNDM--------------DSLRNTLERVTADNKRAKKLRRYIVVEAVYQ-NSGQIAP----LDELIRLKEKYRFRVFLD 281 (483)
Q Consensus 221 ~~~d~--------------~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~-~~G~i~~----L~~l~~l~~k~~~~li~D 281 (483)
.+++. +++++.+.... +..+++|++||+++ .+|.+.| |++|+++|++||++||+|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~D 240 (443)
T PRK07483 167 AYREQRAGESDEAYGQRLADELEAKILELG------PDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILD 240 (443)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHHhcC------CCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEe
Confidence 12222 34454443221 22589999999997 4677666 999999999999999999
Q ss_pred CccccccccCCCCccc-cccCCCCCceeEEEccccccccC---CCceeeccHHHHHHHHhcC----CceeecCCCcHHHH
Q 011567 282 ESNSFGVLGRSGRGLT-EHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSS----SGYVFSASLPPYLA 353 (483)
Q Consensus 282 Ea~s~g~lg~~G~g~~-~~~~v~~~~~Di~~~s~~K~lg~---~GG~i~~~~~~~~~~~~~~----~~~~fs~~~~p~~~ 353 (483)
|++++ +|++|.+++ +++|+.| ||+ +++|+++. +-|.+++++++++.+.... ++.+| +.||+.|
T Consensus 241 EV~tG--fGRtG~~~a~~~~gv~P---Div--~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~--~gnpl~~ 311 (443)
T PRK07483 241 EVMCG--MGRTGTLFACEEDGVAP---DLV--TIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTY--LGHATAC 311 (443)
T ss_pred cceeC--cccCcHHHHHhhcCCCC---Cee--eehhhhccCccccEEEEEcHHHHHHHhcCCCccccCCCC--CCCHHHH
Confidence 99985 577787664 8899988 898 79999971 1233578889988775432 33344 4599999
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccC-CCceee--cCCCCCEEEEEecCCCCCc---hhhHHHHHHHHHHHH
Q 011567 354 SAAITAIDVLEENPDLITKLKKNTAILRTGLSDI-HGLSIA--SNPESPIVFLILEKSTGSM---KNDLQLLEDIADWAL 427 (483)
Q Consensus 354 aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~-~~~~i~--~~~~~~i~~l~l~~~~~~~---~~~~~~~~~i~~~~l 427 (483)
+++.++|++++++ ++.++++++.++|++.|+++ ..+++. ....+.++.+.+..+.... +.+......+...++
T Consensus 312 aaa~a~l~~i~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (443)
T PRK07483 312 AAALAVQRVIAED-GLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAM 390 (443)
T ss_pred HHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHH
Confidence 9999999999875 48999999999999999763 233322 2356778888875432111 112233456777766
Q ss_pred HhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 428 KEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 428 ~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
+ +|+++.+........ ....|||+|++.+|++|||++++++++++.+++.
T Consensus 391 ~-~Gll~~~~~~~~~~~--~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 391 A-RGLMVYPMGGTIDGV--RGDHVLLAPPFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred H-CCcEEEecCccccCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 6 599997642110000 0134999999999999999999999999988754
No 77
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=2.9e-37 Score=316.47 Aligned_cols=365 Identities=16% Similarity=0.191 Sum_probs=262.0
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|+++++++|.|+| .||++||||.++ ..+|| +||+|.+|+.+|+++....+. .+...+...+|+++|++++
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~ai~~q~~~~~~~~~----~~~~~~~~~~lae~L~~~~ 95 (442)
T TIGR00709 21 LPTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGH-NHPNMKQKILDYLQSGLPLHT----LDLTTPLKDAFIEALLNII 95 (442)
T ss_pred CCceEEeccccEEEeCCCCEEEEccccHhhhcCCC-CCHHHHHHHHHHHHhccCccc----cccCcHHHHHHHHHHHHhC
Confidence 36789999999999 899999999997 67999 899999999999997321111 1224578889999999998
Q ss_pred CC----CCEEEe-cccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcCC------------eEEEecCCC---
Q 011567 168 GT----PDSILY-SYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHND--- 224 (483)
Q Consensus 168 g~----e~~i~~-~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~~------------~v~~~~~~d--- 224 (483)
+. ...+++ +||++|++.|++ .+++|..+|.+...||+.+...+.+++. .+..+++++
T Consensus 96 p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (442)
T TIGR00709 96 PKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYR 175 (442)
T ss_pred CCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCcccc
Confidence 63 245565 899999999976 4578888999999999998777766541 122223222
Q ss_pred ----------HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCcccccccc
Q 011567 225 ----------MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLG 290 (483)
Q Consensus 225 ----------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg 290 (483)
.+.+.+.+++.-....+.+..+++|++||+++++|.+.| |++|+++|++||++||+||++++ +|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG--fG 253 (442)
T TIGR00709 176 CPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAG--FG 253 (442)
T ss_pred ccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CC
Confidence 122222222211100112235899999999999887754 99999999999999999999985 56
Q ss_pred CCCCcc-ccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCc
Q 011567 291 RSGRGL-TEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENP 367 (483)
Q Consensus 291 ~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~ 367 (483)
++|.++ .+++|+.| ||+ +++|++|. +-|.++++++ ++.+....++.+| +.||+.|+++.++|+.++++
T Consensus 254 RtG~~~a~~~~gv~P---Div--~~gK~l~~G~Pigav~~~~~-~~~~~~~~~~~T~--~gnpla~aaa~a~L~~i~~~- 324 (442)
T TIGR00709 254 RSGTMFAFEHAGIEP---DFV--VMSKAVGGGLPLAVLLIAPE-FDAWQPAGHTGTF--RGNQLAMVTGTEALNYWKDD- 324 (442)
T ss_pred CCCchhHHHHcCCCC---cEE--EEcccccCCcccEEEEEchH-HhccCCCcCCCCC--CcCHHHHHHHHHHHHHHHhc-
Confidence 677655 47899988 898 59999983 1144666777 4544322233334 46999999999999998764
Q ss_pred HHHHHHHHHHHHHHHhhccCC-Cceee--cCCCCCEEEEEecCCCCC------chhhHHHHHHHHHHHHHhCCEEEEeec
Q 011567 368 DLITKLKKNTAILRTGLSDIH-GLSIA--SNPESPIVFLILEKSTGS------MKNDLQLLEDIADWALKEDGVFVVTSK 438 (483)
Q Consensus 368 ~~~~~l~~~~~~l~~~L~~~~-~~~i~--~~~~~~i~~l~l~~~~~~------~~~~~~~~~~i~~~~l~~~Gv~v~~~~ 438 (483)
++.+++++++++|++.|+++. .+++. ....+.++.+.+.++... ...+......+...+++ +|+++.+..
T Consensus 325 ~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~ 403 (442)
T TIGR00709 325 NLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFE-NGLLLETGG 403 (442)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHH-CCeEEeecC
Confidence 489999999999999998652 23322 235677888888543211 11122345667776665 599987532
Q ss_pred ccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 439 RSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 439 ~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
.. ...||+.|+..+|++|++++++++++++.+++.
T Consensus 404 ~~-------~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~~ 438 (442)
T TIGR00709 404 RE-------GEVFRLLCPITIDQEECEEGISRFKQAVEEALA 438 (442)
T ss_pred CC-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11 134999999999999999999999999988754
No 78
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=8.5e-38 Score=316.16 Aligned_cols=338 Identities=18% Similarity=0.248 Sum_probs=263.6
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecCC---CCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASAN---YLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~~---~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.++| +||++||||+++. +||| +||+|.+|+.++++++... + . ....+...++++.+++..
T Consensus 11 ~~~~~~~~~G~~~~d~~G~~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~~~~~~--~-~--~~~~~~~~~la~~l~~~~ 84 (377)
T PRK02936 11 FPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGH-CHPTVTKAVQEQLDDIWHV--S-N--LFTNSLQEEVASLLAENS 84 (377)
T ss_pred CCceEEEeecCEEEeCCCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhcccc--c-c--ccCCHHHHHHHHHHHhcC
Confidence 35678999999999 8999999999985 9999 9999999999999985321 1 1 224577888888888887
Q ss_pred CCCCEEEecccHHHHHhhhhh---hccCCcEEEEcCCchhHHHhHhhhcCC------------eEEEecCCCHHHHHHHH
Q 011567 168 GTPDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHNDMDSLRNTL 232 (483)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~~---~~~~gdiI~~~~~~h~s~~~g~~~s~~------------~v~~~~~~d~~~Le~~l 232 (483)
+.+.+++++||++|+..|++. +++++++|..+..+|+++..++.+++. .+..++++|++++++.+
T Consensus 85 ~~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 164 (377)
T PRK02936 85 AGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVM 164 (377)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhc
Confidence 777788889999999999885 357778999999999998887776553 23567889999998877
Q ss_pred HHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cccCCCCCce
Q 011567 233 ERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EHCGVPVDKI 307 (483)
Q Consensus 233 ~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~~~v~~~~~ 307 (483)
.. ++++|++|++++++|...+ |++|+++|++||+++|+||+|++ +|++|+++. +++++.|
T Consensus 165 ~~----------~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g--~g~~g~~~~~~~~~~~~--- 229 (377)
T PRK02936 165 NE----------EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTG--IGRTGTLFAYEQFGLDP--- 229 (377)
T ss_pred cC----------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcCchhhHHHhhCCCC---
Confidence 42 3789999999998877654 99999999999999999999974 677777653 6678776
Q ss_pred eEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhc
Q 011567 308 DIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLS 385 (483)
Q Consensus 308 Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~ 385 (483)
|++ |+||++++ ++|++++++++++.+.......+| +.||+.++++.++++.+... +.+++++++.+++++.|+
T Consensus 230 di~--t~sK~l~~G~~ig~v~~~~~~~~~~~~~~~~~t~--~~~~~~~aaa~a~l~~~~~~-~~~~~~~~~~~~l~~~L~ 304 (377)
T PRK02936 230 DIV--TVAKGLGNGIPVGAMIGKKELGTAFGPGSHGSTF--GGNPLAMAAAKEVLQVIKQP-SFLEEVQEKGEYFLQKLQ 304 (377)
T ss_pred cEE--EEcccccCCCccEEEEEcHHHHhhccCCCCCCCC--CCCHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHH
Confidence 765 79999983 358899999999987654333344 46899999999999988543 478889999999999887
Q ss_pred cC-CCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHH
Q 011567 386 DI-HGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEA 462 (483)
Q Consensus 386 ~~-~~~~i~~--~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e 462 (483)
+. ++++... .+.+.++++.+.+. ...+...+ .++||++.+.. .+.||++++..+|++
T Consensus 305 ~~~~~~~~~~~v~~~g~~~~i~~~~~----------~~~~~~~l-~~~gv~v~~~g---------~~~lRi~p~~~~~~~ 364 (377)
T PRK02936 305 EELEHLECVKNIRGKGLMIGIECTEE----------VAPVIEQL-REEGLLVLSAG---------PNVIRLLPPLVVTKE 364 (377)
T ss_pred HHHhhCCcEEeEeecceEEEEEecch----------HHHHHHHH-HHCCeEEecCC---------CCEEEEECCcccCHH
Confidence 63 2333221 23567788877421 33566654 45699987642 134999999999999
Q ss_pred HHHHHHHHHHHHH
Q 011567 463 DLVKACESLKRIS 475 (483)
Q Consensus 463 di~~~~~~l~~~~ 475 (483)
++++++++|++++
T Consensus 365 ~i~~~i~~l~~~~ 377 (377)
T PRK02936 365 ELDQAVYLLKKVL 377 (377)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998763
No 79
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=1.7e-37 Score=315.68 Aligned_cols=350 Identities=17% Similarity=0.205 Sum_probs=260.3
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| .|||+||||.++ ..+|| +||+|.+|+++++++.+.... ...+.+...+|.++|++.+
T Consensus 17 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~~~~~~~----~~~~~~~~~~lae~l~~~~ 91 (412)
T TIGR02407 17 FPTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGH-NNPKLKQALIDYLADDGIIHS----LDMATEAKREFLETFNEII 91 (412)
T ss_pred CCceEEecccCEEEeCCCCEEEEcccchhhccCCC-CCHHHHHHHHHHHhhccceec----cccCcHHHHHHHHHHHHhc
Confidence 46789999999999 899999999987 67999 899999999999997544221 1123577789999999974
Q ss_pred --C--CC-CEEEe-cccHHHHHhhhhh---hccCCcEEEEcCCchhHHHhHhhhcCC------------eEEEecC----
Q 011567 168 --G--TP-DSILY-SYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKH---- 222 (483)
Q Consensus 168 --g--~e-~~i~~-~sG~~a~~~ai~~---~~~~gdiI~~~~~~h~s~~~g~~~s~~------------~v~~~~~---- 222 (483)
+ .. ..+++ +||++|++.|++. +++|..+|.+..+||+.+..++.+++. .+..++.
T Consensus 92 ~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~ 171 (412)
T TIGR02407 92 LKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYL 171 (412)
T ss_pred cCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCcc
Confidence 2 22 35565 8999999999764 567888999999999998877766542 1233343
Q ss_pred ----CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCC
Q 011567 223 ----NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGR 294 (483)
Q Consensus 223 ----~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~ 294 (483)
++++.+++.+++... .+..+++|++||+++++|.+.| |++|+++|++||++||+||++++ +|++|.
T Consensus 172 ~~~~~~~~~l~~~~~~~~~----~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG--~GRtG~ 245 (412)
T TIGR02407 172 GGDVDTIAYFEKLLEDSSS----GVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAG--CGRTGT 245 (412)
T ss_pred ccchhHHHHHHHHHHhccC----CCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC--CCccch
Confidence 346667777754321 1124789999999999888654 99999999999999999999984 678887
Q ss_pred ccc-cccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHH-HhcCcHH
Q 011567 295 GLT-EHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDV-LEENPDL 369 (483)
Q Consensus 295 g~~-~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~-l~~~~~~ 369 (483)
++. +++++.| ||+ +++|++|+.| |++++++++ +.+....++.+| +.+|+.++++.++++. +++ +++
T Consensus 246 ~~a~~~~~v~P---Di~--~~~K~lg~~G~pigav~~~~~~-~~~~~~~~~~T~--~gnpl~~aaa~a~l~~~i~~-~~l 316 (412)
T TIGR02407 246 FFSFEPAGIEP---DIV--CLSKSISGYGLPLALTLIKPEL-DVWKPGEHNGTF--RGNNLAFVTATAALEYYWSD-DAF 316 (412)
T ss_pred hHHhcccCCCC---CEE--EechhccCCccceeEEEEchhh-hccCCCccCCCC--CccHHHHHHHHHHHHHHhcc-cHH
Confidence 654 7889988 887 6899998533 667777776 544322333344 4589999999999996 554 568
Q ss_pred HHHHHHHHHHHHHhhccC----CCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccC
Q 011567 370 ITKLKKNTAILRTGLSDI----HGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKC 445 (483)
Q Consensus 370 ~~~l~~~~~~l~~~L~~~----~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~ 445 (483)
.++++++.++++++|+.+ +++.......+.++++.+.+ .....++...+++ +||++.+....
T Consensus 317 ~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~--------~~~~~~~~~~~~~-~Gv~v~~~~~~----- 382 (412)
T TIGR02407 317 EKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGD--------GDLAGKIAKAAFE-NGLIIETSGPN----- 382 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecC--------hHHHHHHHHHHHH-CCCEEeccCCC-----
Confidence 899999999999888653 22223334567888888843 1234567776665 59999754211
Q ss_pred CCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 446 RLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 446 ~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
.+.||++|+..+|++|++++++++++++++
T Consensus 383 --~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 383 --DEVIKLLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred --CCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence 134999999999999999999999998753
No 80
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-37 Score=316.76 Aligned_cols=366 Identities=16% Similarity=0.176 Sum_probs=266.5
Q ss_pred CccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC
Q 011567 94 PVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT 169 (483)
Q Consensus 94 ~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~ 169 (483)
|++++++|.|+| .|||+||||.++ ..+|| +||+|.+|+.+|+++...... ....++...+|.++|++.++.
T Consensus 15 p~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~hp~v~~Ai~~ql~~~~~~~~----~~~~~~~~~~lae~L~~~~p~ 89 (447)
T PRK06917 15 PVISHGKGVYLYDQNGNKYFDGSSGAVTAGIGH-GVKEIADAIKEQAEEVSFVYR----SQFTSEPAEKLAKKLSDLSPG 89 (447)
T ss_pred CeEEeeeeeEEEeCCCCEEEECchhHHhccCCC-CCHHHHHHHHHHHhhCcCccc----cccCCHHHHHHHHHHHHhCCC
Confidence 368999999999 899999999987 67999 899999999999998532211 111357788999999999864
Q ss_pred --CCEEEecccHHHHHhhhhhh---------ccCCcEEEEcCCchhHHHhHhhhcCCeE------------EEe--c---
Q 011567 170 --PDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRSTV------------VYF--K--- 221 (483)
Q Consensus 170 --e~~i~~~sG~~a~~~ai~~~---------~~~gdiI~~~~~~h~s~~~g~~~s~~~v------------~~~--~--- 221 (483)
+.+++.+||++|++.|++.. ++|..+|.+...||+.+..++.+++... ..+ +
T Consensus 90 ~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~ 169 (447)
T PRK06917 90 DLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCY 169 (447)
T ss_pred CCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCccc
Confidence 34566699999999998765 4567789999999998877766554211 111 1
Q ss_pred ---C---------CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCC-CCCccC----hHHHHHHHHHcCcEEEEeCcc
Q 011567 222 ---H---------NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQN-SGQIAP----LDELIRLKEKYRFRVFLDESN 284 (483)
Q Consensus 222 ---~---------~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~-~G~i~~----L~~l~~l~~k~~~~li~DEa~ 284 (483)
. +|.+.+++.+++... ..+++|++||++++ +|.+.| |++|+++|++||+++|+||++
T Consensus 170 ~~~~~~~~~~~~~~~~~~le~~i~~~~~------~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~ 243 (447)
T PRK06917 170 RCPVQKVYPTCQLACATELETAIERIGA------EHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVM 243 (447)
T ss_pred ccccCCChHHHHHHHHHHHHHHHHhcCC------CceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 0 123455555554321 25899999999985 455555 899999999999999999999
Q ss_pred ccccccCCCCccc-cccCCCCCceeEEEccccccccC---CCceeeccHHHHHHHHhcCCcee--ecCCCcHHHHHHHHH
Q 011567 285 SFGVLGRSGRGLT-EHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSSGYV--FSASLPPYLASAAIT 358 (483)
Q Consensus 285 s~g~lg~~G~g~~-~~~~v~~~~~Di~~~s~~K~lg~---~GG~i~~~~~~~~~~~~~~~~~~--fs~~~~p~~~aaa~~ 358 (483)
++ +|++|.++. +++++.| ||+ +++|++|. +.|.+++++++++.+......+. .+.+.||+.++++++
T Consensus 244 tG--fGRtG~~~a~~~~gv~P---Di~--~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a 316 (447)
T PRK06917 244 TG--LGRTGAMFAMEHWGVEP---DIM--TLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALA 316 (447)
T ss_pred hC--cCcccchhhHHhcCCCC---CEE--EeeehhccCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHH
Confidence 84 678888764 8899988 887 79999972 23556788999988764322211 123469999999999
Q ss_pred HHHHHhcCcHHHHHHHHHHHHHHHhhccCC-Cceee--cCCCCCEEEEEecCCCCC---chhhHHHHHHHHHHHHHhCCE
Q 011567 359 AIDVLEENPDLITKLKKNTAILRTGLSDIH-GLSIA--SNPESPIVFLILEKSTGS---MKNDLQLLEDIADWALKEDGV 432 (483)
Q Consensus 359 al~~l~~~~~~~~~l~~~~~~l~~~L~~~~-~~~i~--~~~~~~i~~l~l~~~~~~---~~~~~~~~~~i~~~~l~~~Gv 432 (483)
+|+.+++. ++.++++++.++|++.|+++. .+++. ....+.++.+.+..+... ...+......+...+++ +||
T Consensus 317 ~l~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gv 394 (447)
T PRK06917 317 VLEYMEKH-NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAK-NGL 394 (447)
T ss_pred HHHHHHHC-CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHh-CCc
Confidence 99999765 489999999999999998753 23222 234677888887432211 11122446677777666 599
Q ss_pred EEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011567 433 FVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLRD 481 (483)
Q Consensus 433 ~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~ 481 (483)
++.+........ ....+|++|+..+|++|||+++++++++++++..+
T Consensus 395 l~~~~~~~~~g~--~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~~ 441 (447)
T PRK06917 395 LLYPAVAGQDGK--EGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQK 441 (447)
T ss_pred EEEecccccCCC--CCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 997642110000 01349999999999999999999999999988654
No 81
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=4e-37 Score=315.23 Aligned_cols=355 Identities=22% Similarity=0.259 Sum_probs=270.3
Q ss_pred cCCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q 011567 91 CEPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKF 166 (483)
Q Consensus 91 ~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~ 166 (483)
..|+++++++|.++| .||++||||+++ +.+|| +||+|.+++.+++.+.... +.. +++.+.+.++++.|+++
T Consensus 17 ~~~~~~~~~~g~~~~d~dG~~~id~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~---~~~-~~~~~~~~~l~~~l~~~ 91 (413)
T cd00610 17 PYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGH-NHPEVVEALKEQLAKLTHF---SLG-FFYNEPAVELAELLLAL 91 (413)
T ss_pred CCCceEEeeecCEEEeCCCCEEEEcCccHHhhccCC-CCHHHHHHHHHHHHhCcCc---cCc-ccCCHHHHHHHHHHHHh
Confidence 357889999999999 799999999995 46888 8999999999999764221 111 14678999999999999
Q ss_pred hC--CCCEEEecccHHHHHhhhhhh---ccCCcEEEEcCCchhHHHhHhhhcCC------------eEEEecCC------
Q 011567 167 LG--TPDSILYSYGLSTMFSAIPCF---CKKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHN------ 223 (483)
Q Consensus 167 ~g--~e~~i~~~sG~~a~~~ai~~~---~~~gdiI~~~~~~h~s~~~g~~~s~~------------~v~~~~~~------ 223 (483)
+| .+++++++||++|+..+++.+ +++.++|+.+..+|++...++..++. ++..++++
T Consensus 92 ~~~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (413)
T cd00610 92 TPEGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPP 171 (413)
T ss_pred CCCCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccch
Confidence 99 677888899999999998865 56677888899999988877776643 36678888
Q ss_pred -----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCC
Q 011567 224 -----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGR 294 (483)
Q Consensus 224 -----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~ 294 (483)
|+++|++.+++... ++++|+++|+++++|.+.| +++|+++|++||+++|+||+|++ +|++|.
T Consensus 172 ~~~~~d~~~l~~~l~~~~~-------~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g--~g~~g~ 242 (413)
T cd00610 172 AELADDLEALEEALEEHPE-------EVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTG--FGRTGK 242 (413)
T ss_pred hhHHHHHHHHHHHHhcCCC-------CEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcCcc
Confidence 78888887765322 4789999999999999887 99999999999999999999985 455665
Q ss_pred cc-ccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHH
Q 011567 295 GL-TEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLIT 371 (483)
Q Consensus 295 g~-~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~ 371 (483)
+. .+++++.| |++ |+||+++. +.|++++++++++.+......+.++.+.+|+.++++.++++.+++ +++.+
T Consensus 243 ~~~~~~~~~~~---d~~--t~sK~l~~g~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~-~~~~~ 316 (413)
T cd00610 243 MFAFEHFGVEP---DIV--TLGKGLGGGLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE-EGLLE 316 (413)
T ss_pred hhhHhhcCCCC---CeE--EEcccccCccccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh-ccHHH
Confidence 53 46677766 765 89999984 236778899999886212222233445689999999999999876 45889
Q ss_pred HHHHHHHHHHHhhccCC---CceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCC
Q 011567 372 KLKKNTAILRTGLSDIH---GLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLP 448 (483)
Q Consensus 372 ~l~~~~~~l~~~L~~~~---~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~ 448 (483)
+++++.+++++.|+++. +......+.++++++.+.+.......+......+++.+++ +||++.+.. +
T Consensus 317 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gv~v~~~~---------~ 386 (413)
T cd00610 317 NAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALE-RGLLLRPSG---------G 386 (413)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHH-CCeEEeecC---------C
Confidence 99999999999987652 2222223467888888854321111122345567776555 599998753 1
Q ss_pred CceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 449 VGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 449 ~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
..+|++++..+|++|++++++++++++
T Consensus 387 ~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 387 NVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 349999999999999999999998763
No 82
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=5e-37 Score=313.06 Aligned_cols=349 Identities=22% Similarity=0.273 Sum_probs=270.3
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++.+++|.++| .||++||||+++ ..+|| .||+|.+++.+++++++..+ +.+ ..+.+.++++.+++++
T Consensus 13 ~~~~~~~~~G~~~~d~dg~~~lD~~~~~~~~~~Gh-~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~~~~~l~~~~ 86 (400)
T PTZ00125 13 LPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGH-CHPKILAALINQAQKLTLTS---RAF--YNDVLGLAEKYITDLF 86 (400)
T ss_pred CCccEEeeecCEEEeCCCCEEEEcccCHhhccCCc-CCHHHHHHHHHHHHhccccc---ccc--cCHHHHHHHHHHHhCC
Confidence 36678999999999 799999999986 45788 89999999999999876533 222 2468899999999999
Q ss_pred CCCCEEEecccHHHHHhhhhhhc-----------cCCcEEEEcCCchhHHHhHhhhcCC------------eEEEecCCC
Q 011567 168 GTPDSILYSYGLSTMFSAIPCFC-----------KKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHND 224 (483)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~~~~-----------~~gdiI~~~~~~h~s~~~g~~~s~~------------~v~~~~~~d 224 (483)
+.+.+++++||++|++.+++... ++.++|.++..+|+.+..++..++. .+..++++|
T Consensus 87 ~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 166 (400)
T PTZ00125 87 GYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYND 166 (400)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCC
Confidence 99889999999999999998663 3456889999999998887765542 235677889
Q ss_pred HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cc
Q 011567 225 MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EH 299 (483)
Q Consensus 225 ~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~ 299 (483)
+++||+.++. . .+++|++||+++++|.+.| +++|+++|++||+++|+||+|++ +|++|+++. ++
T Consensus 167 ~~~le~~l~~--~-------~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g--~g~~G~~~~~~~ 235 (400)
T PTZ00125 167 VEALEKLLQD--P-------NVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTG--LGRTGKLLAHDH 235 (400)
T ss_pred HHHHHHHhCC--C-------CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCccchhhHHHh
Confidence 9999988851 1 3789999999999999988 99999999999999999999974 577776543 45
Q ss_pred cCCCCCceeEEEccccccccCC---CceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHH
Q 011567 300 CGVPVDKIDIVTAAMGHALATE---GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKN 376 (483)
Q Consensus 300 ~~v~~~~~Di~~~s~~K~lg~~---GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~ 376 (483)
+++.| |++ +++|+++.. -|++++++++++.+.......+| +.+|+.++++.++++.+++. .+.++++++
T Consensus 236 ~~~~p---d~~--~~sK~l~~g~~~ig~v~~~~~~~~~~~~~~~~~t~--~~~~~~~~aa~~~l~~i~~~-~~~~~~~~~ 307 (400)
T PTZ00125 236 EGVKP---DIV--LLGKALSGGLYPISAVLANDDVMLVIKPGEHGSTY--GGNPLACAVAVEALEVLKEE-KLAENAQRL 307 (400)
T ss_pred cCCCC---CEE--EEcccccCCCcCcEEEEEcHHHHhhccCCCCCCCC--CcCHHHHHHHHHHHHHHHhc-CHHHHHHHH
Confidence 67766 777 588999742 26788999999887654333344 35889999999999988754 377888888
Q ss_pred HHHHHHhhccCC---CceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEE
Q 011567 377 TAILRTGLSDIH---GLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRL 453 (483)
Q Consensus 377 ~~~l~~~L~~~~---~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi 453 (483)
.+++++.|+++. ++.....+.+.+..+.+..+. .....++++.+++ +||++.+.. +..|||
T Consensus 308 ~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~~------~~~~~~~~~~l~~-~Gv~v~~~~---------~~~lRi 371 (400)
T PTZ00125 308 GEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHSD------GVNAWDLCLKLKE-NGLLAKPTH---------DNIIRF 371 (400)
T ss_pred HHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccCc------chHHHHHHHHHHH-CCeEEeecC---------CCEEEE
Confidence 898888887641 221111345677777774321 1234567777664 599997642 134999
Q ss_pred EccCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011567 454 FVSAAHSEADLVKACESLKRISAVVLRD 481 (483)
Q Consensus 454 ~~~~~~t~edi~~~~~~l~~~~~~~~~~ 481 (483)
+++..+|++++++++++|+++++++-.+
T Consensus 372 ~~~~~~~~~~i~~~l~~l~~~l~~~~~~ 399 (400)
T PTZ00125 372 APPLVITKEQLDQALEIIKKVLKSFDSN 399 (400)
T ss_pred ECCccCCHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999887443
No 83
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-36 Score=310.47 Aligned_cols=355 Identities=18% Similarity=0.220 Sum_probs=264.1
Q ss_pred CCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC
Q 011567 93 PPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (483)
Q Consensus 93 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g 168 (483)
|.++++++|.|+| .||++||||.++ ..+|| +||+|.+|+.+++++..... . .....+...++.++|+++++
T Consensus 23 p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~~~~~~--~--~~~~~~~~~~la~~l~~~~p 97 (421)
T PRK06777 23 DFYAERAENATLWDVEGREYIDFAAGIAVLNTGH-RHPKVVAAVRQQLDQFTHTA--Y--QIVPYASYVTLAERINALAP 97 (421)
T ss_pred CeeEEeeecCEEEeCCCCEEEEcccCHHhhccCC-CCHHHHHHHHHHHhhccccc--c--cccCChHHHHHHHHHHHhCC
Confidence 6789999999999 899999999987 67999 89999999999999853211 1 11245677899999999876
Q ss_pred ---CCCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcCCe-------------EEEecCC------
Q 011567 169 ---TPDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRST-------------VVYFKHN------ 223 (483)
Q Consensus 169 ---~e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~~~-------------v~~~~~~------ 223 (483)
.+.+++++||++|++.|++ .+++|..+|.+...||+.+..++.+++.. +..++++
T Consensus 98 ~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 177 (421)
T PRK06777 98 IDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGV 177 (421)
T ss_pred CCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCc
Confidence 3567788999999999975 46788889999999999988777665421 1111222
Q ss_pred ----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCc-cC---hHHHHHHHHHcCcEEEEeCccccccccCCCCc
Q 011567 224 ----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQI-AP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRG 295 (483)
Q Consensus 224 ----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i-~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g 295 (483)
+++++++.+++.. .+..+++|++||+++++|.. .| |++|+++|++||++||+||+|++ +|++|.+
T Consensus 178 ~~~~~~~~l~~~~~~~~-----~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg--~gr~g~~ 250 (421)
T PRK06777 178 SVEEALSSVERLFKADI-----APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTG--FARTGKL 250 (421)
T ss_pred CHHHHHHHHHHHHHhcc-----CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC--CccCCch
Confidence 2455666665311 12248999999999998864 44 99999999999999999999984 5777765
Q ss_pred c-ccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHH
Q 011567 296 L-TEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITK 372 (483)
Q Consensus 296 ~-~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~ 372 (483)
+ .+++++.| |++ +++|++++ +.|++++++++++.+.......+| +.||+.++++.++|+.+++ +++.++
T Consensus 251 ~~~~~~~~~p---Div--~~sK~l~~G~pigav~~~~~i~~~~~~~~~~~T~--~~~p~~~aaa~a~L~~~~~-~~l~~~ 322 (421)
T PRK06777 251 FAMEYYDVKP---DLI--TMAKSLGGGMPISAVVGRAEVMDAPAPGGLGGTY--AGNPLAVAAALAVLDVIAE-EKLCQR 322 (421)
T ss_pred hhhhhcCCCC---CEE--eeehhhcCCCceEEEEEcHHHHhccCCCCCCCCC--CcCHHHHHHHHHHHHHHHh-ccHHHH
Confidence 4 47888877 776 79999982 126688899999887654444444 4599999999999998876 468999
Q ss_pred HHHHHHHHHHhhccCC---CceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCC
Q 011567 373 LKKNTAILRTGLSDIH---GLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPV 449 (483)
Q Consensus 373 l~~~~~~l~~~L~~~~---~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~ 449 (483)
++++.+++++.|+++. +......+.+.++.+.+..+... ..+......+...+++ +||++.+.... .+
T Consensus 323 ~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~-~~~~~~~~~l~~~~~~-~Gv~i~~~~~~-------g~ 393 (421)
T PRK06777 323 ALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQTG-KPSPEFTRQYQRQALE-EGLLLLSCGVH-------GN 393 (421)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCccC-CccHHHHHHHHHHHHh-CCeEEeecCCC-------CC
Confidence 9999999999998751 11112245677777766432111 1123345566666555 69999765321 13
Q ss_pred ceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 450 GIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 450 ~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
.+||+|++.+|++++++++++|++++.
T Consensus 394 ~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 394 VIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 499999999999999999999998864
No 84
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=9.3e-37 Score=309.07 Aligned_cols=349 Identities=19% Similarity=0.234 Sum_probs=265.7
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| +|||+||||.++ ..+|| +||+|.+|+.+|+++... . ++ .+ ..+...+|.++|++..
T Consensus 22 ~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~~-~-~~-~~--~~~~~~~la~~L~~~~ 95 (408)
T PRK04612 22 RQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGH-NDPDLVAALTEQAGKLWH-T-SN-VF--YSAPPLKLAEELVTAS 95 (408)
T ss_pred CCceEEEeeeCEEEECCCCEEEEcCccHhhccCCC-CCHHHHHHHHHHHHhccc-c-cc-cc--CCHHHHHHHHHHHhhC
Confidence 46778999999999 899999999987 67999 899999999999997422 1 11 11 3467789999999987
Q ss_pred CC-CCEEEecccHHHHHhhhhhhc------c----CCcEEEEcCCchhHHHhHhhhcCC------------eEEEecCCC
Q 011567 168 GT-PDSILYSYGLSTMFSAIPCFC------K----KGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHND 224 (483)
Q Consensus 168 g~-e~~i~~~sG~~a~~~ai~~~~------~----~gdiI~~~~~~h~s~~~g~~~s~~------------~v~~~~~~d 224 (483)
+. +.+++.+||++|++.|++... + |..+|.+..+||+.+..++..++. .+..++++|
T Consensus 96 ~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d 175 (408)
T PRK04612 96 RFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFND 175 (408)
T ss_pred CCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCC
Confidence 54 456666999999999986532 2 345888999999988777665432 234567788
Q ss_pred HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cc
Q 011567 225 MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EH 299 (483)
Q Consensus 225 ~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~ 299 (483)
.+.+++.++. . ++++|++||+++++|.+.| +++|+++|++||+++|+||+|++ +|++|.++. ++
T Consensus 176 ~~~l~~~~~~--~-------~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg--~gr~G~~~a~~~ 244 (408)
T PRK04612 176 VEALEAAMAG--G-------DVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCG--MGRTGTLFAHWQ 244 (408)
T ss_pred HHHHHHhhCC--C-------CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcCCchhhhhh
Confidence 9999887742 1 4899999999998777765 89999999999999999999984 677776543 45
Q ss_pred cCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Q 011567 300 CGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNT 377 (483)
Q Consensus 300 ~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~ 377 (483)
+++.| |++ |++|++|+ +-|++++++++++.+....++.+|+ .+|+.++++.++|+.+++. ++.++++++.
T Consensus 245 ~~~~p---di~--t~~K~l~~G~piga~~~~~~~~~~~~~~~~~~t~~--~~p~~~aaa~a~L~~~~~~-~l~~~~~~~g 316 (408)
T PRK04612 245 EQVTP---DIV--TLAKALGGGFPIGAMLAGPKVAETMQFGAHGTTFG--GNPLAAAVARVALRKLASP-QIAANVARQS 316 (408)
T ss_pred cCCCC---CEE--EEcchhcCCCceEEEEECHHHHhhhcCCCcCCCCC--CCHHHHHHHHHHHHHHHhc-cHHHHHHHHH
Confidence 56665 776 89999982 1255677788888876555555554 5899999999999999864 6999999999
Q ss_pred HHHHHhhccCC-Cceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEE
Q 011567 378 AILRTGLSDIH-GLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLF 454 (483)
Q Consensus 378 ~~l~~~L~~~~-~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~ 454 (483)
+++++.|+++. .+++. ..+.+.++.+.+... ......++++.++ ++|+++.+.. +..||+.
T Consensus 317 ~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~------~~~~a~~i~~~l~-~~Gvlv~~~g---------~~~lRl~ 380 (408)
T PRK04612 317 AALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPA------HAGQAGAILDLAA-EHGLLLLQAG---------PDVLRFV 380 (408)
T ss_pred HHHHHHHHHHHhhCCCeeeeeccceEEEEEecCc------hhhHHHHHHHHHH-HCCeEEeeCC---------CCEEEEc
Confidence 99999998752 22222 234677888887421 1123456677655 4699986532 1349999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011567 455 VSAAHSEADLVKACESLKRISAVVLRD 481 (483)
Q Consensus 455 ~~~~~t~edi~~~~~~l~~~~~~~~~~ 481 (483)
|+..+|++||+++++++++++.++.+.
T Consensus 381 Ppl~it~eeid~~l~~l~~~l~~~~~~ 407 (408)
T PRK04612 381 PALNLTDAELADGLARLRLALADYVAQ 407 (408)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999887654
No 85
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.4e-37 Score=314.42 Aligned_cols=349 Identities=16% Similarity=0.185 Sum_probs=258.6
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.|+| .||++||||.++ ..+|| +||+|.+|+.++++++..... ...+++...+|.++|++.+
T Consensus 22 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~ai~~q~~~~~~~~~----~~~~~~~~~~lae~L~~~~ 96 (422)
T PRK05630 22 RNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGH-GHPRLKAAAHKQIDTMSHVMF----GGLTHEPAIKLTRKLLNLT 96 (422)
T ss_pred CCeeEEeceeeEEEECCCCEEEEcchhHHHhcCCC-CCHHHHHHHHHHHHhCCCccc----CCcCCHHHHHHHHHHHhhC
Confidence 46789999999999 899999999987 67999 899999999999998643111 1124577899999999998
Q ss_pred C--CCCEEEecccHHHHHhhhhhh---c------cCCcEEEEcCCchhHHHhHhhhcCCe-------------EEEecCC
Q 011567 168 G--TPDSILYSYGLSTMFSAIPCF---C------KKGDLIVADEGVHWGIQNGLYLSRST-------------VVYFKHN 223 (483)
Q Consensus 168 g--~e~~i~~~sG~~a~~~ai~~~---~------~~gdiI~~~~~~h~s~~~g~~~s~~~-------------v~~~~~~ 223 (483)
+ .+.+++.+||++|++.|++.. + +|..+|.+...||+.+..++.+++.. ...++.+
T Consensus 97 p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~ 176 (422)
T PRK05630 97 DNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAP 176 (422)
T ss_pred CCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCC
Confidence 5 456777799999999998653 2 35678999999999887776654421 1111111
Q ss_pred -----CHHHHHHHHHHhhhhhhhccCccEEEEEecc-cCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCC
Q 011567 224 -----DMDSLRNTLERVTADNKRAKKLRRYIVVEAV-YQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSG 293 (483)
Q Consensus 224 -----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v-~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G 293 (483)
+.++++..++...... ..++++|++||+ ++.+|.+.| +++|+++|++||++||+||++++ +|++|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~---~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG--~GrtG 251 (422)
T PRK05630 177 PVRGSSPQEISEYLRSLELLI---DETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATG--FGRTG 251 (422)
T ss_pred cccCCChHHHHHHHHHHHHHH---hhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeC--CCcCc
Confidence 1222322222211100 014899999996 888787665 89999999999999999999964 48888
Q ss_pred Cccc-cccCCCCCceeEEEcccccccc---CCCceeeccHHHHHHHHhc------CCceeecCCCcHHHHHHHHHHHHHH
Q 011567 294 RGLT-EHCGVPVDKIDIVTAAMGHALA---TEGGFCTGSARVVDHQRLS------SSGYVFSASLPPYLASAAITAIDVL 363 (483)
Q Consensus 294 ~g~~-~~~~v~~~~~Di~~~s~~K~lg---~~GG~i~~~~~~~~~~~~~------~~~~~fs~~~~p~~~aaa~~al~~l 363 (483)
+++. +++|+.| ||+ +++|+++ .++|++++++++++.+... .++.+| +.||+.|+++.++|+++
T Consensus 252 ~~~a~~~~gv~P---Di~--t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~--~g~Pla~aaa~aaL~~l 324 (422)
T PRK05630 252 ELFATLAAGVTP---DIM--CVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTF--MANPLACAVAHASLEII 324 (422)
T ss_pred hhhHHHhcCCCC---Cee--eeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCC--cCCHHHHHHHHHHHHHH
Confidence 8765 7899988 898 8999995 2456678899999887532 123344 46999999999999999
Q ss_pred hcCcHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccc
Q 011567 364 EENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSM 441 (483)
Q Consensus 364 ~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~--~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~ 441 (483)
+++ +..++++++.++|++.|+.+...+..+ ...+.++.+.+..+. ....+...+++ +|+++.+..
T Consensus 325 ~~~-~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~--------~~~~~~~~~~~-~Gl~~~~~g--- 391 (422)
T PRK05630 325 ETG-MWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQPV--------DMEEATQAAVD-HGVWLRPFG--- 391 (422)
T ss_pred HhC-cHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCcc--------cHHHHHHHHHH-CCeEEEecC---
Confidence 875 478899999999999887653322221 346888999885321 12356666665 599987532
Q ss_pred cccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 442 LDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 442 ~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
..+|+.|++.+|++|+|++++++++++++
T Consensus 392 -------~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 392 -------RLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred -------CEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 23899999999999999999999998854
No 86
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=7e-37 Score=339.73 Aligned_cols=359 Identities=19% Similarity=0.219 Sum_probs=269.8
Q ss_pred cCCCccccCCCCeEE-ECCeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC
Q 011567 91 CEPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (483)
Q Consensus 91 ~~~~~i~~~~g~~~~-~~G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g 168 (483)
..|+++++++|.|++ .|||+||||.++ ..+|| +||+|.+|+.+|+.+.... ++ + ..+.+.+|+++|+++++
T Consensus 566 ~~p~~i~~g~G~~l~D~dG~~ylD~~~~~~~lGh-~hp~v~~Ai~~q~~~l~~~---~~-~--~~~~~~elae~L~~~~p 638 (972)
T PRK06149 566 ADPPQIERGWRHHLFDMAGRSYLDMVNNVTVLGH-GHPRLAAAAARQWSLLNTN---SR-F--HYAAVAEFSERLAALAP 638 (972)
T ss_pred cCCCeEEEeeeeEEEeCCCCEEEECCCCccccCC-CCHHHHHHHHHHHHhcccc---cc-c--cCHHHHHHHHHHHHhCC
Confidence 346789999999999 899999999987 45888 8999999999999875432 12 1 35788999999999984
Q ss_pred --CCCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcCCe-------------EEE----------e
Q 011567 169 --TPDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRST-------------VVY----------F 220 (483)
Q Consensus 169 --~e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~~~-------------v~~----------~ 220 (483)
.+.+++++||++|++.|++ ++++|.++|.++..||+.+..+..+++.. +.. +
T Consensus 639 ~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~ 718 (972)
T PRK06149 639 DGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRF 718 (972)
T ss_pred CCcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcC
Confidence 5678888999999999987 77899999999999998776554443210 111 2
Q ss_pred cCCC-----HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccC
Q 011567 221 KHND-----MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGR 291 (483)
Q Consensus 221 ~~~d-----~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~ 291 (483)
+++| .+++++.++.... .+..+++|++||+++++|.+.| |++|+++|++||+++|+||++++ +|+
T Consensus 719 ~~~~~~~~~~~~~~~~l~~~~~----~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tG--fGR 792 (972)
T PRK06149 719 RGADSAADYVRDVVAQLEELDA----SGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVG--YGR 792 (972)
T ss_pred CCcccHHHHHHHHHHHHHHHhh----cCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhc--CCc
Confidence 2233 3455555543221 2235899999999999999988 99999999999999999999954 355
Q ss_pred CCC-c-cccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeec-CCCcHHHHHHHHHHHHHHhcC
Q 011567 292 SGR-G-LTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFS-ASLPPYLASAAITAIDVLEEN 366 (483)
Q Consensus 292 ~G~-g-~~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs-~~~~p~~~aaa~~al~~l~~~ 366 (483)
+|. + ..+++|+.| ||+ +++|++|. +.|++++++++++.+... ++.|+ .+.||+.|++++++|++++++
T Consensus 793 tG~~~~a~e~~gv~P---Div--t~gK~lg~G~Pl~av~~~~~i~~~~~~~--~~~~sT~~gnP~~~aaala~L~~i~~e 865 (972)
T PRK06149 793 LGHYFWGFEQQGVVP---DII--TMAKGMGNGHPLGAVITRREIAEALEAE--GYFFSSTGGSPVSCRIGMAVLDVLREE 865 (972)
T ss_pred cCccchhhhhcCCCC---CEE--EecccccCCeeeEEEEEcHHHHhhhccC--CcccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 564 2 358899988 898 89999982 235678899999987642 23333 467999999999999999875
Q ss_pred cHHHHHHHHHHHHHHHhhccCC-Cceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccc
Q 011567 367 PDLITKLKKNTAILRTGLSDIH-GLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLD 443 (483)
Q Consensus 367 ~~~~~~l~~~~~~l~~~L~~~~-~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~ 443 (483)
++.+++++++++|++.|+++. .+++. ..+.+.++.+.+..+......+......++..+++ +||++.+....
T Consensus 866 -~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~-~Gvl~~~~g~~--- 940 (972)
T PRK06149 866 -KLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLE-LGVIMQPTGDH--- 940 (972)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHh-CCeEEeecCCC---
Confidence 489999999999999997752 12322 23467788888743222222233446678887666 59999764321
Q ss_pred cCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 444 KCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 444 ~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
...|||.|+..+|++|++++++++++++.+.
T Consensus 941 ----~~vl~~~Ppl~it~~~id~~~~~l~~~l~~~ 971 (972)
T PRK06149 941 ----LNILKIKPPLCLDRESADFFVDMLDRVLTEG 971 (972)
T ss_pred ----CCEEEEECCCcCCHHHHHHHHHHHHHHHHhh
Confidence 1239999999999999999999999998754
No 87
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=5.9e-37 Score=308.82 Aligned_cols=339 Identities=20% Similarity=0.242 Sum_probs=261.2
Q ss_pred cccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCC
Q 011567 96 LESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPD 171 (483)
Q Consensus 96 i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~ 171 (483)
+++++|.|+| .|||+||||.++ ..+|| +||++.+|+.+++++....+ ....++...+|.++|++..+.+.
T Consensus 1 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~~~~-----~~~~~~~~~~la~~l~~~~~~~~ 74 (382)
T PLN00144 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGH-GDPDWVKAVAEQAGTLAHVS-----NVYHTIPQVELAKRLVASSFADR 74 (382)
T ss_pred CeeeeccEEEeCCCCEEEECCcCHHhccCCC-CCHHHHHHHHHHHHhcCCcc-----ccccCHHHHHHHHHHHhcCCCCe
Confidence 4689999999 899999999987 57999 89999999999999853321 11235778899999999887777
Q ss_pred EEEecccHHHHHhhhhhh---cc-------------CCcEEEEcCCchhHHHhHhhhcCC------------eEEEecCC
Q 011567 172 SILYSYGLSTMFSAIPCF---CK-------------KGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHN 223 (483)
Q Consensus 172 ~i~~~sG~~a~~~ai~~~---~~-------------~gdiI~~~~~~h~s~~~g~~~s~~------------~v~~~~~~ 223 (483)
+++.+||++|++.|++.. ++ +.++|.+...||+.+...+.+++. .+..+++|
T Consensus 75 v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 154 (382)
T PLN00144 75 VFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYG 154 (382)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCC
Confidence 778899999999998643 32 356889999999988777665542 23567788
Q ss_pred CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCccc-c
Q 011567 224 DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-E 298 (483)
Q Consensus 224 d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~ 298 (483)
|++.|++.++. . ..++|++||+++++|.+.+ +++|+++|++||+++|+||++++ +|++|.++. +
T Consensus 155 d~~~l~~~~~~--~-------~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg--~gr~g~~~~~~ 223 (382)
T PLN00144 155 NLEAARKLIQK--G-------KTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCG--LGRTGYLWAHE 223 (382)
T ss_pred CHHHHHHhcCC--C-------CeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC--CCccchHhhhh
Confidence 99999987742 1 3789999999888666554 89999999999999999999985 677776544 5
Q ss_pred ccCCCCCceeEEEcccccccc--CCCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHH
Q 011567 299 HCGVPVDKIDIVTAAMGHALA--TEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKN 376 (483)
Q Consensus 299 ~~~v~~~~~Di~~~s~~K~lg--~~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~ 376 (483)
++++.| |++ ||+|+++ .+.|++++++++++.+....+..+| +.+|+.++++.++|+++++ +++.++++++
T Consensus 224 ~~~~~P---Di~--t~sK~l~~G~pig~v~~~~~~~~~~~~~~~~~T~--~~~pl~~aaa~a~l~~i~~-~~~~~~~~~~ 295 (382)
T PLN00144 224 AYGVEP---DIM--TLAKPLAGGLPIGAVLVTEKVASAINPGDHGSTF--AGGPLVCNAALAVLDKISK-PGFLASVAKK 295 (382)
T ss_pred hcCCCC---CEE--EecccccCCcceEEEEEcHHHHhccCCCCCCCCC--CCCHHHHHHHHHHHHHHhh-chHHHHHHHH
Confidence 789887 765 8999996 3347788999999887654444444 4589999999999999976 4588899999
Q ss_pred HHHHHHhhccC-CCcee--ecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEE
Q 011567 377 TAILRTGLSDI-HGLSI--ASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRL 453 (483)
Q Consensus 377 ~~~l~~~L~~~-~~~~i--~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi 453 (483)
++++++.|.++ ..++. .....+.++++.+..+ ...+...+++ +||++.+... .+.||+
T Consensus 296 g~~l~~~l~~~~~~~~~~~~vrg~G~~~~l~l~~~----------~~~~~~~~~~-~Gv~i~~~~~--------~~~lrl 356 (382)
T PLN00144 296 GEYLRELLRRKLGGNPHVKEVRGVGLLVGIQLDVP----------AGPLVDACRD-SGLLVLTAGK--------GDVVRL 356 (382)
T ss_pred HHHHHHHHHHHHhhCCCceeeecCceEEEEEecCc----------cHHHHHHHHH-CCeEEeecCC--------CCEEEE
Confidence 99888877653 22221 1124678888888211 2356776655 6999976521 145999
Q ss_pred EccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 454 FVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 454 ~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
+|+..+|++|+++++++|++++.++
T Consensus 357 ~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 357 VPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred eCCCccCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999998653
No 88
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=5.5e-37 Score=312.80 Aligned_cols=344 Identities=17% Similarity=0.209 Sum_probs=257.4
Q ss_pred CCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC
Q 011567 93 PPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (483)
Q Consensus 93 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g 168 (483)
++.+++++|.++| .||++||||+++ .+||| +||++.+++.+++++++....+ +-+.+...++.++|++.++
T Consensus 28 ~~~~~~a~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~~~~~~~~~~~~----~~~~~~~~~la~~l~~~~~ 102 (427)
T TIGR00508 28 VYPVESADGVELTLDDGRRLIDGMSSWWAAIHGY-NHPRLNAAAQKQIDKMSHVMFG----GFTHKPAIELCQKLVKMTP 102 (427)
T ss_pred CceEEeeeeeEEEeCCCCEEEEccchHHHhcCCC-CCHHHHHHHHHHHHhcCCcccc----ccCCHHHHHHHHHHHhhCC
Confidence 4568999999999 799999999997 58999 8999999999999986542211 1135678899999999986
Q ss_pred C--CCEEEecccHHHHHhhhhhhc---------cCCcEEEEcCCchhHHHhHhhhcCCe---------------EEEe--
Q 011567 169 T--PDSILYSYGLSTMFSAIPCFC---------KKGDLIVADEGVHWGIQNGLYLSRST---------------VVYF-- 220 (483)
Q Consensus 169 ~--e~~i~~~sG~~a~~~ai~~~~---------~~gdiI~~~~~~h~s~~~g~~~s~~~---------------v~~~-- 220 (483)
. +.+++.+||++|++.|++... +|.++|.+...||+.+...+.+++.. ...+
T Consensus 103 ~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~ 182 (427)
T TIGR00508 103 NALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQ 182 (427)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCC
Confidence 4 466777999999999987432 36679999999998876555543321 0111
Q ss_pred -------cCCCHHHHHHHHHHhhhhhhhccCccEEEEEecc-cCCCCCccC----hHHHHHHHHHcCcEEEEeCcccccc
Q 011567 221 -------KHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAV-YQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGV 288 (483)
Q Consensus 221 -------~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v-~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~ 288 (483)
.++|++++++++++... .+++|++||+ ++.+|...| |++|+++|++||++||+||+++ |
T Consensus 183 ~~~~~~~~~~~~~~l~~~l~~~~~-------~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~t-G- 253 (427)
T TIGR00508 183 NRFDEEWNEEAITPLAKLMELHSD-------EIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIAT-G- 253 (427)
T ss_pred ccccchhHHHHHHHHHHHHHhcCC-------cEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-C-
Confidence 12256677777764322 4899999998 555555443 9999999999999999999995 4
Q ss_pred ccCCCCcc-ccccCCCCCceeEEEccccccccCCCce-----eeccHHHHHHHHhcC-Cceee--cCCCcHHHHHHHHHH
Q 011567 289 LGRSGRGL-TEHCGVPVDKIDIVTAAMGHALATEGGF-----CTGSARVVDHQRLSS-SGYVF--SASLPPYLASAAITA 359 (483)
Q Consensus 289 lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~~GG~-----i~~~~~~~~~~~~~~-~~~~f--s~~~~p~~~aaa~~a 359 (483)
+|++|+++ .+++++.| ||+ +++|+++ ||+ +++++++++.++... ..+.+ +...||+.++++.++
T Consensus 254 ~Gr~G~~~~~~~~~v~p---Di~--~~gK~l~--gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~ 326 (427)
T TIGR00508 254 FGRTGKLFACEHAGVVP---DIL--CVGKALT--GGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEAS 326 (427)
T ss_pred CCcCCccchhhhcCCCC---CEE--Eechhhh--cCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHH
Confidence 68888875 57899987 887 5999996 664 467788888886432 11112 224689999999999
Q ss_pred HHHHhcCcHHHHHHHHHHHHHHHhhccCCCceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEee
Q 011567 360 IDVLEENPDLITKLKKNTAILRTGLSDIHGLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTS 437 (483)
Q Consensus 360 l~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~ 437 (483)
|+++++.+ ..++++++.++|++.|+++...+.. ....++++.+.+.++. ....+..++++ +||++.+.
T Consensus 327 l~~l~~~~-~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~--------~~~~~~~~l~~-~Gv~~~~~ 396 (427)
T TIGR00508 327 LAILLEGE-WQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPV--------NVEELQKKFVE-QGVWIRPF 396 (427)
T ss_pred HHHHHhCC-HHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCcc--------CHHHHHHHHHH-CCeEEEec
Confidence 99998754 7899999999999999876322211 1345888888885321 12456776665 59999754
Q ss_pred cccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 438 KRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 438 ~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
. ..+|++|+..+|++|||++++++++++++
T Consensus 397 ~----------~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 397 G----------KLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred C----------CEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 2 23899999999999999999999998864
No 89
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-37 Score=291.94 Aligned_cols=353 Identities=16% Similarity=0.108 Sum_probs=265.1
Q ss_pred ccCCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHh
Q 011567 90 RCEPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAK 165 (483)
Q Consensus 90 ~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~ 165 (483)
+..|++|.+++|.|++ .+||+|||+.++ ..+|| +||+|.+++.+|+.+.-..+. .| ..++..++++.|+.
T Consensus 30 ~~~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGH-chP~v~~a~~kQl~~l~H~t~----~~-~~~pi~~~Ae~L~s 103 (442)
T KOG1404|consen 30 YKKPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGH-CHPDVVAAAVKQLKKLYHTTS----GY-LNPPIHDLAEALVS 103 (442)
T ss_pred ccCCceEEecceEEEEcCCCceeehhhCCeEEEEcCC-CChHHHHHHHHhhhhhEEeec----cc-cCCcHHHHHHHHHH
Confidence 4568999999999999 799999999998 67999 999999999999977432221 12 34566788888888
Q ss_pred hhCCC--CEEEecccHHHHHhhh---hhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEec--C----------------
Q 011567 166 FLGTP--DSILYSYGLSTMFSAI---PCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFK--H---------------- 222 (483)
Q Consensus 166 ~~g~e--~~i~~~sG~~a~~~ai---~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~--~---------------- 222 (483)
.+... .+++.|||++||+.|+ +.+++.-|+|....+||+.....+.+++.....++ .
T Consensus 104 ~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~ 183 (442)
T KOG1404|consen 104 KLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRG 183 (442)
T ss_pred hCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccc
Confidence 88644 4555599999999985 56789999999999999998877776664332211 0
Q ss_pred ---CC---------HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCcccc
Q 011567 223 ---ND---------MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSF 286 (483)
Q Consensus 223 ---~d---------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~ 286 (483)
++ .+++++.+... .+.++++++.|++++.+|.+.+ |+++.++|+|+|.++|.||++++
T Consensus 184 ~~~~~~~~e~~d~~a~~l~d~i~~~------~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtG 257 (442)
T KOG1404|consen 184 IFGGSNEEEASDRYAKELEDLILYD------GPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTG 257 (442)
T ss_pred cCCCCchhhhHHHHHHHHHHHHHhc------CCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhc
Confidence 01 12333343332 3446999999999999888876 99999999999999999999975
Q ss_pred ccccCCCC-ccccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHH
Q 011567 287 GVLGRSGR-GLTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL 363 (483)
Q Consensus 287 g~lg~~G~-g~~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l 363 (483)
+||+|. +-+|++|+-| ||+ ||+|++|. +-|.++.++++.+.+..... +-++.+.+|++|++++++|+++
T Consensus 258 --fGRtG~~wgfe~h~v~P---DIv--TmAKgiGnG~Pl~AVvtt~EIa~v~~~~~~-~fnTyggnP~a~avg~aVL~Vi 329 (442)
T KOG1404|consen 258 --FGRTGHMWGFESHGVVP---DIV--TMAKGIGNGFPLGAVVTTPEIADVLNQKSS-HFNTYGGNPVACAVGLAVLKVI 329 (442)
T ss_pred --cccccccccccccCCCc---cHH--HHHhhccCCCcceeeecCHHHHHHHHhccc-cccccCCCchhHHHHHHHHHHH
Confidence 566664 3358899988 888 99999982 12456788999998876652 3334455999999999999999
Q ss_pred hcCcHHHHHHHHHHHHHHHhhccCC-CceeecC--CCCCEEEEEecCCC-CCchhhHHHHHHHHHHHHHhCCEEEEeecc
Q 011567 364 EENPDLITKLKKNTAILRTGLSDIH-GLSIASN--PESPIVFLILEKST-GSMKNDLQLLEDIADWALKEDGVFVVTSKR 439 (483)
Q Consensus 364 ~~~~~~~~~l~~~~~~l~~~L~~~~-~~~i~~~--~~~~i~~l~l~~~~-~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~ 439 (483)
+++ +++++..+.+.+|+++|.++. +.++.++ +.+.++.+.+-+.. ............+.++|.+ .|+++..+..
T Consensus 330 kee-~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke-~Gvlvg~g~i 407 (442)
T KOG1404|consen 330 KEE-NLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKE-LGVLVGKGGI 407 (442)
T ss_pred HHH-hHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHH-hCeeeecccc
Confidence 875 599999999999999998763 4666554 45678888875543 2222233345566777665 5999965543
Q ss_pred cccccCCCCCceEEEccCCCCHHHHHHHHHHH
Q 011567 440 SMLDKCRLPVGIRLFVSAAHSEADLVKACESL 471 (483)
Q Consensus 440 ~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l 471 (483)
.. .-+||.|+.++|++|+|.+++..
T Consensus 408 ~G-------~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 408 HG-------NVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred cc-------eEEEecCCeeccHHHHHHHHHHH
Confidence 21 23999999999999998887765
No 90
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=6e-37 Score=313.38 Aligned_cols=347 Identities=16% Similarity=0.185 Sum_probs=251.5
Q ss_pred CccccCCCCeEE-E-CCeeEEEeecC---CCCCCCCChHHHH--HHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q 011567 94 PVLESAAGPHTI-I-SGKEVVNFASA---NYLGLIGHEKLLE--SCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKF 166 (483)
Q Consensus 94 ~~i~~~~g~~~~-~-~G~~~id~~s~---~~lG~~~~p~i~~--a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~ 166 (483)
.++++++|.|+| + ||++||||.++ ..+|| +||+|.+ ++.+|+.+.......+ ...+.+...++.++|+++
T Consensus 28 ~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh-~~p~v~~~~ai~~ql~~l~~~~~~~--~~~~~~~~~~la~~l~~~ 104 (443)
T PRK08297 28 LDLERSQGSYLVDARTGRRYLDMFTFFASSALGM-NHPALADDPEFRAELGRAALNKPSN--SDVYTVEMARFVDTFARV 104 (443)
T ss_pred eEEEeccCCEEEECCCCCEeeecccCHhhhcCCC-CChHHhhHHHHHHHHHHhhhhcccc--CCcCCHHHHHHHHHHHhh
Confidence 347899999999 5 89999999997 67999 8999999 9999998743111111 112356778899999998
Q ss_pred h-C--CCCEEEecccHHHHHhhhhhh----------cc-----CCcEEEEcCCchhHHHhHhhhcCCeE-----------
Q 011567 167 L-G--TPDSILYSYGLSTMFSAIPCF----------CK-----KGDLIVADEGVHWGIQNGLYLSRSTV----------- 217 (483)
Q Consensus 167 ~-g--~e~~i~~~sG~~a~~~ai~~~----------~~-----~gdiI~~~~~~h~s~~~g~~~s~~~v----------- 217 (483)
. + .+.+++.+||++|++.|++.. .+ |..+|.+..+||+.+..++.+++...
T Consensus 105 ~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~ 184 (443)
T PRK08297 105 LGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDW 184 (443)
T ss_pred cCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCc
Confidence 7 2 356777799999999998764 12 35688999999999887777664211
Q ss_pred -------EEecC-------------CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHH
Q 011567 218 -------VYFKH-------------NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEK 273 (483)
Q Consensus 218 -------~~~~~-------------~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k 273 (483)
..++. +|.+++++++.+. +..+++|++||+++++|.+.| |++|+++|++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-------~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~ 257 (443)
T PRK08297 185 PRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERH-------PHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDE 257 (443)
T ss_pred cccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhC-------CCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHH
Confidence 00110 0123334444432 235899999999999998765 9999999999
Q ss_pred cCcEEEEeCccccccccCCCCcc-ccccCCCCCceeEEEccccccccCCCceeeccHHHHHHHH-hc-CCcee-ecCCCc
Q 011567 274 YRFRVFLDESNSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQR-LS-SSGYV-FSASLP 349 (483)
Q Consensus 274 ~~~~li~DEa~s~g~lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~~~~~~~~-~~-~~~~~-fs~~~~ 349 (483)
||++||+||++++ +|++|+++ ++++++.| ||+ +++|+++ .||++++++ +.+... .. ..+.. .+.+.|
T Consensus 258 ~g~llI~DEV~tG--fGRtG~~~a~~~~gv~P---Div--~~gK~l~-~~a~l~~~~-i~~~~~~~~~~~~~~~~T~~gn 328 (443)
T PRK08297 258 HDALLIFDEVQTG--VGLTGTAWAYQQLGVRP---DIV--AFGKKTQ-VCGIMAGRR-VDEVEDNVFAVSSRINSTWGGN 328 (443)
T ss_pred cCCEEEEechhhc--cCccchHHHHHhcCCCC---CEE--Eeccccc-ccceecchH-HHHhhhhhccCccccCCCCCcc
Confidence 9999999999985 57788765 48899988 898 6999996 467666653 322211 00 11111 222469
Q ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCC-Cce--e-ecCCCCCEEEEEecCCCCCchhhHHHHHHHHHH
Q 011567 350 PYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIH-GLS--I-ASNPESPIVFLILEKSTGSMKNDLQLLEDIADW 425 (483)
Q Consensus 350 p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~-~~~--i-~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~ 425 (483)
|+.|+++.++|+.+++. ++.++++++++++++.|+++. .++ . ...+.+.++.+.+.+ ......+...
T Consensus 329 pl~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~--------~~~~~~~~~~ 399 (443)
T PRK08297 329 LVDMVRARRILEVIEED-GLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPT--------TADRDEVIRR 399 (443)
T ss_pred HHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecC--------HHHHHHHHHH
Confidence 99999999999999865 589999999999999997641 122 1 223467888888842 1234567777
Q ss_pred HHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 426 ALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 426 ~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
+++ +||++.+... ..+|++|++.+|++|||++++++++++.++
T Consensus 400 l~~-~Gvl~~~~~~---------~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 400 LWE-EGVLVLPCGE---------RSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred HHH-CCEEEecCCC---------CeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 664 6999975421 239999999999999999999999998764
No 91
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=8.5e-37 Score=339.01 Aligned_cols=361 Identities=18% Similarity=0.187 Sum_probs=270.0
Q ss_pred cCCCccccCCCCeEE-ECCeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC
Q 011567 91 CEPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (483)
Q Consensus 91 ~~~~~i~~~~g~~~~-~~G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g 168 (483)
..|+++++++|.|+| .||++||||.++ ..+|| +||+|.+|+.+|+++....+ . ..++...++.++|++.++
T Consensus 605 ~~p~~i~~g~G~~l~D~dG~~ylD~~~g~~~lGH-~hp~v~~Ai~~q~~~l~~~~-----~-~~~~~~~~lAe~L~~~~p 677 (1013)
T PRK06148 605 SDPIKFVRGWGVWLIDNRGRAYLDCFNNVCHVGH-AHPRVVAAAARQAARLNTNT-----R-YLHDAIVAYAERLTATLP 677 (1013)
T ss_pred CCCceEEEeeecEEEECCCCEEEEcccChhhcCC-CCHHHHHHHHHHHhhcCCcC-----C-cCCHHHHHHHHHHHHhCC
Confidence 457889999999999 899999999988 67999 89999999999999853321 1 135788999999999986
Q ss_pred C--CCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcCC------------eE--------EEecCC
Q 011567 169 T--PDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRS------------TV--------VYFKHN 223 (483)
Q Consensus 169 ~--e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~~------------~v--------~~~~~~ 223 (483)
. +.+++++||++|++.|++ .+++|.++|.++.+||+.+...+.+++. .+ ...+++
T Consensus 678 ~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 757 (1013)
T PRK06148 678 DGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPER 757 (1013)
T ss_pred CCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCC
Confidence 4 566777999999999975 5678999999999999987765554431 11 111223
Q ss_pred --CH-------HHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCcccccccc
Q 011567 224 --DM-------DSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLG 290 (483)
Q Consensus 224 --d~-------~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg 290 (483)
|. +++++.++.... .+..+++|++||+++++|.+.| |++++++|++||+++|+||++++ +|
T Consensus 758 ~~~~~~~~~~~~~l~~~i~~~~~----~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtG--fG 831 (1013)
T PRK06148 758 WPDAEHGRRFAESVAEQIAAMAA----KGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVG--FG 831 (1013)
T ss_pred CChhhhHHHHHHHHHHHHHhhhc----cCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccC--CC
Confidence 21 345555533211 1235899999999999998887 99999999999999999999975 46
Q ss_pred CCCC--ccccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcC
Q 011567 291 RSGR--GLTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEEN 366 (483)
Q Consensus 291 ~~G~--g~~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~ 366 (483)
++|. +..+++|+.| ||+ +++|++|. +-|.+++++++++.+.... .+..+.+.||+.|++++++|++++++
T Consensus 832 RtG~~~~a~e~~gv~P---Div--t~gK~lggG~Plgav~~~~ei~~~~~~g~-~~~~Tf~gnpla~aaa~a~L~~i~~e 905 (1013)
T PRK06148 832 RVGSHWWAFETQGVVP---DIV--TMGKPIGNGHPMGAVVTTREIADSFDNGM-EYFNTFGGNPVSCAIGLAVLDIIEDE 905 (1013)
T ss_pred CCCCcchhhhhcCCCc---cee--eecccccCCcceEEEEEcHHHHhhccCCC-ccccCCCCCHHHHHHHHHHHHHHhhc
Confidence 6665 3468899988 898 79999982 1134678899998875431 12233356999999999999999875
Q ss_pred cHHHHHHHHHHHHHHHhhccCC-Cceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccc
Q 011567 367 PDLITKLKKNTAILRTGLSDIH-GLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLD 443 (483)
Q Consensus 367 ~~~~~~l~~~~~~l~~~L~~~~-~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~ 443 (483)
++.+++++++++|+++|+++. .+++. ....+.++.+.+..+......+......+...|++ +||++.+....
T Consensus 906 -~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~g~~--- 980 (1013)
T PRK06148 906 -DLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARE-RGILIGTEGPH--- 980 (1013)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHh-CCeEEeccCCC---
Confidence 589999999999999997752 22221 23467788888754322222233445677877665 59999754211
Q ss_pred cCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 444 KCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 444 ~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
...|||.|+..+|++|||++++++++++.++.
T Consensus 981 ----~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~~ 1012 (1013)
T PRK06148 981 ----DNVLKIRPPLIFSRADADHLLEVLDDVLAAAL 1012 (1013)
T ss_pred ----CCEEEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 13499999999999999999999999998764
No 92
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=2.8e-37 Score=314.46 Aligned_cols=343 Identities=15% Similarity=0.118 Sum_probs=246.7
Q ss_pred cCCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHH--HHhcCCCCCCCCCcccChHHHHHHHHHHH
Q 011567 91 CEPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSA--LEKYGVGSCGPRGFYGTIDVHLDCEARIA 164 (483)
Q Consensus 91 ~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~--l~~~g~g~~~~~~~~g~~~~~~~l~~~La 164 (483)
+.|..+++++|.|+| .||++||||.++ ..+|| +||+|.+|+.++ ...... .. .+ ..+...+++++|+
T Consensus 39 ~~p~~~~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh-~~p~i~~Ai~~q~~~~~l~~-~~----~~-~~~~~~~la~~l~ 111 (464)
T TIGR00699 39 HFLADYEKSRGNYLVDVDGNRLLDLYSQISSIPIGY-NNPALLKAAQSPEMATTLIN-RP----AL-GNFPSKDWAKILK 111 (464)
T ss_pred ccceEEEecccCEEEeCCCCEEEEccCCHhhhcCCC-CCHHHHHHHHHHHHHHhhcc-cc----cC-CcHHHHHHHHHHH
Confidence 447789999999999 899999999997 78999 899999999985 333211 11 11 2345667777765
Q ss_pred h----hhC--CCCEEEecccHHHHHhhhhhhc----------------------------c--CCcEEEEcCCchhHHHh
Q 011567 165 K----FLG--TPDSILYSYGLSTMFSAIPCFC----------------------------K--KGDLIVADEGVHWGIQN 208 (483)
Q Consensus 165 ~----~~g--~e~~i~~~sG~~a~~~ai~~~~----------------------------~--~gdiI~~~~~~h~s~~~ 208 (483)
+ +++ .+.+++.+||++|++.|++... + +.++|.+..+||+.+..
T Consensus 112 ~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~ 191 (464)
T TIGR00699 112 EGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFG 191 (464)
T ss_pred HhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHH
Confidence 4 554 3566677999999999987541 1 22689999999999887
Q ss_pred HhhhcCCeE-----------EEecC-------------------CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCC
Q 011567 209 GLYLSRSTV-----------VYFKH-------------------NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNS 258 (483)
Q Consensus 209 g~~~s~~~v-----------~~~~~-------------------~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~ 258 (483)
++.+++... ..++. ++++++++++++... .+++|++||+++++
T Consensus 192 als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~-------~iAAvI~EPv~g~~ 264 (464)
T TIGR00699 192 SLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHK-------PVAAIIVEPIQSEG 264 (464)
T ss_pred HHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCC-------cEEEEEEeCCCCCC
Confidence 777654311 01111 124456666654322 48999999999999
Q ss_pred CCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCcc-ccccCCCCCceeEEEccccccccCCCceeeccHHHHH
Q 011567 259 GQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVD 333 (483)
Q Consensus 259 G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~~~~~ 333 (483)
|.+.| |++|+++|++||++||+||++++ +|++|+++ ++++|+. ..+||+ +++|++|+ ||++++++. +.
T Consensus 265 G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tG--fGrtG~~fa~e~~gv~-~~PDi~--t~gK~lg~-gG~~~~~~~-~~ 337 (464)
T TIGR00699 265 GDNHASPDFFRKLRDITKKHNVAFIVDEVQTG--VGATGKFWAHEHWNLD-DPPDMV--TFSKKFQT-AGYFFHDPA-FR 337 (464)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeC--CCCCcchhHHHhcCCC-CCCCEE--Eehhhhcc-CCccccchh-cc
Confidence 99887 99999999999999999999975 47888775 5899996 233897 79999952 466555432 11
Q ss_pred HHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCC-Cce-ee----cCCCCCEEEEEecC
Q 011567 334 HQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIH-GLS-IA----SNPESPIVFLILEK 407 (483)
Q Consensus 334 ~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~-~~~-i~----~~~~~~i~~l~l~~ 407 (483)
......++.+| +.||+.|+++.++|+.++++ ++.++++++.++|++.|+++. .++ +. +.+.+.++.+.+.+
T Consensus 338 ~~~~~~~~~T~--~gnp~~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~ 414 (464)
T TIGR00699 338 PNKPYRQFNTW--MGDPSRALILREIIQEIKRK-DLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPD 414 (464)
T ss_pred CCCCcccccCC--CCCHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCC
Confidence 10111122233 46899999999999999865 489999999999999997752 233 21 12567888888731
Q ss_pred CCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 408 STGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 408 ~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
......+.+.+++ +|+++.... ...|||+|++.+|++||++++++|++++
T Consensus 415 --------~~~~~~i~~~~~~-~Gvl~~~~g---------~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 415 --------EAKRDKLLKKARN-NGVNIGGCG---------VKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred --------HHHHHHHHHHHHH-CCcEEecCC---------CCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 2234577777766 599987542 1339999999999999999999998763
No 93
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=3.4e-36 Score=306.94 Aligned_cols=355 Identities=17% Similarity=0.231 Sum_probs=264.1
Q ss_pred CCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC
Q 011567 93 PPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (483)
Q Consensus 93 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g 168 (483)
|.++++++|.++| +|||+||||.++ ..+|| +||+|.+|+.+++++...... .....+...++.++|++.++
T Consensus 23 ~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~~~~~~~----~~~~~~~~~~la~~l~~~~p 97 (421)
T PRK09792 23 NFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGH-RHPDLVAAVEQQLQQFTHTAY----QIVPYESYVTLAEKINALAP 97 (421)
T ss_pred CeeEEeccccEEEeCCCCEEEEccCchhhhcCCC-CCHHHHHHHHHHHHhccCccc----CccCCHHHHHHHHHHHHhCC
Confidence 5778999999999 899999999987 67999 899999999999998542111 11245777899999999875
Q ss_pred C---CCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcCC-------------eEEEecC-------
Q 011567 169 T---PDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRS-------------TVVYFKH------- 222 (483)
Q Consensus 169 ~---e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~~-------------~v~~~~~------- 222 (483)
. +.+++++||++|++.|++ .+++|..+|.+...||+.+...+.+++. .+..++.
T Consensus 98 ~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~ 177 (421)
T PRK09792 98 VSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGI 177 (421)
T ss_pred CCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccc
Confidence 2 567778999999999975 4568888999999999987766665442 1222222
Q ss_pred ---CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCcc-C---hHHHHHHHHHcCcEEEEeCccccccccCCCCc
Q 011567 223 ---NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIA-P---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRG 295 (483)
Q Consensus 223 ---~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~-~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g 295 (483)
++.+.+++.+++.. .+..+++|++||+++++|... | +++|+++|++||+++|+||++++ +|++|++
T Consensus 178 ~~~~~~~~l~~~~~~~~-----~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg--~gr~G~~ 250 (421)
T PRK09792 178 STQDSLDAIERLFKSDI-----EAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSG--FARTGKL 250 (421)
T ss_pred cHHHHHHHHHHHHHhcc-----CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCCCCch
Confidence 23466676665421 012489999999999988755 5 99999999999999999999985 5777766
Q ss_pred cc-cccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHH
Q 011567 296 LT-EHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITK 372 (483)
Q Consensus 296 ~~-~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~ 372 (483)
+. +++++.| ||+ |++|++++ +-|++++++++++.+....+..+| +.||+.++++.+++++++++ ++.++
T Consensus 251 ~a~~~~~~~p---Di~--t~gK~l~~G~pigav~~~~~i~~~~~~~~~~~T~--~gnpl~~aaa~a~l~~l~~~-~~~~~ 322 (421)
T PRK09792 251 FAMDHYADKP---DLM--TMAKSLAGGMPLSGVVGNANIMDAPAPGGLGGTY--AGNPLAVAAAHAVLNIIDKE-SLCER 322 (421)
T ss_pred hHHHhcCCCC---cEE--EeehhhcCCCceEEEEEcHHHHhccCCCCcCCCC--CCCHHHHHHHHHHHHHHHhh-hHHHH
Confidence 54 7788776 775 89999972 236688899999887654444444 46899999999999999765 58889
Q ss_pred HHHHHHHHHHhhccCC-Cce--eecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCC
Q 011567 373 LKKNTAILRTGLSDIH-GLS--IASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPV 449 (483)
Q Consensus 373 l~~~~~~l~~~L~~~~-~~~--i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~ 449 (483)
++++.+++++.|+.+. .++ ......+.++++.+.+... ...+......+...+++ +||++.+... .+.
T Consensus 323 ~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~-~~~~~~~~~~l~~~~~~-~Gv~i~~~g~-------~~~ 393 (421)
T PRK09792 323 ANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQT-GEPSAAIAQKIQQRALA-QGLLLLTCGA-------YGN 393 (421)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCcc-CCcchHHHHHHHHHHHH-CCcEEeecCC-------CCC
Confidence 9999999988887642 122 2223347888998864311 11122345677877776 5999853211 124
Q ss_pred ceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 450 GIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 450 ~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
.||+.|++.+|++|+++++++++++++
T Consensus 394 ~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 394 VIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred EEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 599999999999999999999998874
No 94
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=7.8e-36 Score=307.14 Aligned_cols=361 Identities=16% Similarity=0.239 Sum_probs=261.0
Q ss_pred CCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC
Q 011567 93 PPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (483)
Q Consensus 93 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g 168 (483)
|.++++++|.|+| .|||+||||.++ ..+|| +||+|.+|+.+++++...... . ...++...++.++|+++++
T Consensus 37 ~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~~~~~--~--~~~~~~~~~la~~L~~~~p 111 (451)
T PRK06918 37 PTFAQSANGALVTDVDGNQYIDFAGAIGTINVGH-SHPKVKEALHKQVDQYIHTGF--N--VMMYEPYIELAEKLAALAP 111 (451)
T ss_pred CceEEeccccEEEeCCCCEEEEcCCchhhcCCCC-CCHHHHHHHHHHHHhccCccc--c--ccccHHHHHHHHHHHHhCC
Confidence 5789999999999 899999999997 67999 899999999999998532111 1 1235778999999999986
Q ss_pred C---CCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcCCe-------------EEEecCCC-----
Q 011567 169 T---PDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRST-------------VVYFKHND----- 224 (483)
Q Consensus 169 ~---e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~~~-------------v~~~~~~d----- 224 (483)
. +.+++++||++|++.|++ .+++|..+|.+..+||+.+..++.+++.. +..+++.+
T Consensus 112 ~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (451)
T PRK06918 112 GSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRP 191 (451)
T ss_pred CCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCcccccc
Confidence 3 356666999999999975 46788999999999999887777654421 12222211
Q ss_pred ------------HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCcccccc
Q 011567 225 ------------MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGV 288 (483)
Q Consensus 225 ------------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~ 288 (483)
.+.+++.++... .+.++++|++||+++++|.+.| +++|+++|++||++||+||++++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg-- 264 (451)
T PRK06918 192 EGLTEEQYDDFMIEEFKNFFISEV-----APETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTG-- 264 (451)
T ss_pred ccCchHHHHHHHHHHHHHHHHhhc-----CCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--
Confidence 112333332110 1235899999999999887665 89999999999999999999975
Q ss_pred ccCCCCcc-ccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc
Q 011567 289 LGRSGRGL-TEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE 365 (483)
Q Consensus 289 lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~ 365 (483)
+|++|..+ .+++++.| |++ |+||++++ +-|++++++++++.+....+..+| +.+|+.++++.++++.+++
T Consensus 265 ~gr~g~~~a~~~~~v~p---Di~--t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~--~g~~l~~aaa~a~l~~i~~ 337 (451)
T PRK06918 265 FARTGKYFAIEHFDVVP---DLI--TVSKSLGAGVPISGVIGRKEIMDESAPGELGGTY--AGSPLGCAAALAVLDIIEK 337 (451)
T ss_pred cCccCceehhHhcCCCC---CEE--eeehhhcCCCccEEEEEcHHHHhccCCCCcCcCC--CcCHHHHHHHHHHHHHHHH
Confidence 45556433 46778776 766 89999982 127788999998887544344444 4589999999999999875
Q ss_pred CcHHHHHHHHHHHHHHHhhccCC-Cceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc
Q 011567 366 NPDLITKLKKNTAILRTGLSDIH-GLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML 442 (483)
Q Consensus 366 ~~~~~~~l~~~~~~l~~~L~~~~-~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~ 442 (483)
. ++.++++++++++++.|+++. .+++. ..+.+.++.+.+..+......+......+...+++ +||++.+....
T Consensus 338 ~-~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~Gvlv~~~~~~-- 413 (451)
T PRK06918 338 E-NLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANK-RGLLLLSAGTY-- 413 (451)
T ss_pred C-CHHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHH-CCeEEeecCCC--
Confidence 4 478888888899988887652 23221 12356666666532111111233345667776555 69999775321
Q ss_pred ccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011567 443 DKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLRD 481 (483)
Q Consensus 443 ~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~ 481 (483)
.+.+|++++..+|+++|++++++|+++++++..+
T Consensus 414 -----~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~~~ 447 (451)
T PRK06918 414 -----GNVIRVLMPLVITDEQLEEGLTIIEESLQACYEK 447 (451)
T ss_pred -----CCEEEEECCCccCHHHHHHHHHHHHHHHHHHHHh
Confidence 1349999999999999999999999999887654
No 95
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=3.2e-36 Score=308.94 Aligned_cols=375 Identities=20% Similarity=0.270 Sum_probs=271.6
Q ss_pred HHHHHHhhcCCCCCCcccccc--cccCCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCC
Q 011567 68 EIDELCDEWVPESLIPPIIEE--MRCEPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGV 141 (483)
Q Consensus 68 e~~~l~~~~~~~~~~~~~~~~--~~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~ 141 (483)
+.-+...++.|-......... ..+.|.++++++|.++| .||++||||.++ ..+|| +||+|.+|+++++++. .
T Consensus 4 ~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~-~ 81 (423)
T TIGR00713 4 NLFEEAKQVFPGGVNSPVRAFKSVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGH-AHPRVVEAVKEALERG-T 81 (423)
T ss_pred HHHHHHHhhCCCCCCCcccccccCCCCCeeEEeccCCEEEeCCCCEEEEccccccccccCC-CCHHHHHHHHHHHHhC-C
Confidence 344455666676654332221 12347789999999999 899999999997 56899 8999999999999873 2
Q ss_pred CCCCCCCcccChHHHHHHHHHHHhhhCC-CCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhc----
Q 011567 142 GSCGPRGFYGTIDVHLDCEARIAKFLGT-PDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLS---- 213 (483)
Q Consensus 142 g~~~~~~~~g~~~~~~~l~~~La~~~g~-e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s---- 213 (483)
. ++...+...+|+++|+++++. +++++++||++|++.|++ .++++..+|.++..||+........+
T Consensus 82 ~------~~~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~ 155 (423)
T TIGR00713 82 S------YGAPTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGA 155 (423)
T ss_pred c------CCCCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcc
Confidence 1 223456789999999998864 466677999999999976 46678889999999998643222111
Q ss_pred ---------------CCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHc
Q 011567 214 ---------------RSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKY 274 (483)
Q Consensus 214 ---------------~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~ 274 (483)
......++++|+++|++.+++... ++++|++||+++++|.+.| +++|+++|++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~-------~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~ 228 (423)
T TIGR00713 156 ATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGE-------EIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEY 228 (423)
T ss_pred cccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCC-------cEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHh
Confidence 113456788999999998875322 4789999999999998877 89999999999
Q ss_pred CcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeec-CCCcHH
Q 011567 275 RFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFS-ASLPPY 351 (483)
Q Consensus 275 ~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs-~~~~p~ 351 (483)
|+++|+||+|++.++|. .+..+++++.| |++ ||||++++ +.|++++++++++.+......+.++ .+.+|+
T Consensus 229 ~~llI~DEv~~g~r~g~--~~~~~~~~~~p---Di~--t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~ 301 (423)
T TIGR00713 229 GSLLIFDEVMTGFRVAL--GGAQEYFGVEP---DLT--TLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSGNPL 301 (423)
T ss_pred CCEEEEEccccccccCc--chhHHHhCCCc---chh--hhhhhhcCCCceeeeeEHHHHHHhhCcCCCeeeccCCCCCHH
Confidence 99999999998655542 34557788877 765 89999983 3588999999999886432222222 257999
Q ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccC---CCceeecCCCCCEEEEEecCCCCC-----chhhHHHHHHHH
Q 011567 352 LASAAITAIDVLEENPDLITKLKKNTAILRTGLSDI---HGLSIASNPESPIVFLILEKSTGS-----MKNDLQLLEDIA 423 (483)
Q Consensus 352 ~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~---~~~~i~~~~~~~i~~l~l~~~~~~-----~~~~~~~~~~i~ 423 (483)
.++++.++|+.+++.+ ..++++++.+++++.|.++ .++.......+.++.+.+..+... ...+......++
T Consensus 302 ~~aaa~a~l~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (423)
T TIGR00713 302 AMAAGLATLKLLDEEG-VYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFF 380 (423)
T ss_pred HHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHH
Confidence 9999999999987653 7778888888877776532 144432234677888777532110 001223345677
Q ss_pred HHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 424 DWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 424 ~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
..+++ +||++.+..+ +.+|++++ +|++||+++++++++++++
T Consensus 381 ~~l~~-~Gv~v~~~~~---------~~~~l~~~--~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 381 HEMLD-KGVFLPPSQF---------EACFLSAA--HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred HHHHH-CCeEEecCCc---------cceeeECC--CCHHHHHHHHHHHHHHHhh
Confidence 77775 6999875432 22788765 8999999999999998865
No 96
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=5.5e-36 Score=305.97 Aligned_cols=356 Identities=17% Similarity=0.238 Sum_probs=261.4
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.++| .||++||||.++ ..+|| +||+|.+|+.+++++..... . .....+...++.++|++++
T Consensus 15 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~ql~~~~~~~-~---~~~~~~~~~~la~~l~~~~ 89 (420)
T TIGR00700 15 LPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGH-SHPRVVDAVRTQVAEFTHTC-F---MVTPYEGYVALAEKLNRIA 89 (420)
T ss_pred CCeeEEeeeeeEEEeCCCCEEEECccCHHhccCCC-CCHHHHHHHHHHHHhccCcc-c---cccCChHHHHHHHHHHHhC
Confidence 46789999999999 899999999997 67999 89999999999999854211 1 1123467789999999998
Q ss_pred CC---CCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcCC-------------eEEEecCC-----
Q 011567 168 GT---PDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRS-------------TVVYFKHN----- 223 (483)
Q Consensus 168 g~---e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~~-------------~v~~~~~~----- 223 (483)
+. +.+++++||++|++.|++ .+++|..+|.+..+||+.+...+.+++. .+..++..
T Consensus 90 p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (420)
T TIGR00700 90 PGSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRD 169 (420)
T ss_pred CCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccc
Confidence 52 456777999999999975 4678888999999999988777765432 11112221
Q ss_pred -----------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCcccccc
Q 011567 224 -----------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGV 288 (483)
Q Consensus 224 -----------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~ 288 (483)
+++.+++.+.... .+..+++|++||+++++|.+.| +++|+++|++||++||+||++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg-- 242 (420)
T TIGR00700 170 GLLDKQLSTDGELAAARAIFVIDV-----GANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTG-- 242 (420)
T ss_pred cccccchhHHHHHHHHHHHHHhhc-----CCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccC--
Confidence 1334555543110 1235899999999999998777 99999999999999999999985
Q ss_pred ccCCCCcc-ccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc
Q 011567 289 LGRSGRGL-TEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE 365 (483)
Q Consensus 289 lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~ 365 (483)
+|++|.++ .+++++.| |++ ++||++++ +-|++++++++++.+....+..+|+ .+|+.++++.++++.+++
T Consensus 243 ~gr~g~~~a~~~~~~~p---Di~--~lsK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~~--~~pl~~aaa~a~l~~l~~ 315 (420)
T TIGR00700 243 FARTGAMFACEHEGPEP---DLI--TTAKSLADGLPLSGVTGRAEIMDAPAPGGLGGTYA--GNPLACAAALAVLAIIES 315 (420)
T ss_pred CcccchhHHHhhcCCCC---CEE--EeeccccCCcceEEEEecHHHHhhcCCCCcCCCCC--cCHHHHHHHHHHHHHHHh
Confidence 56666543 46788877 776 69999982 2277889999998876544444554 589999999999999876
Q ss_pred CcHHHHHHHHHHHHHHHhhccCCC-ce--eecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc
Q 011567 366 NPDLITKLKKNTAILRTGLSDIHG-LS--IASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML 442 (483)
Q Consensus 366 ~~~~~~~l~~~~~~l~~~L~~~~~-~~--i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~ 442 (483)
. .+.+++++..+++++.|+++.. ++ ....+.+.++++.+.++. ....+.....++...+++ +||++.+....
T Consensus 316 ~-~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~-~~~~~~~~~~~l~~~~~~-~Gv~i~p~~~f-- 390 (420)
T TIGR00700 316 E-GLIERARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELVDPG-TTEPDAGLAERIATAAHA-AGLLLLTCGMF-- 390 (420)
T ss_pred c-cHHHHHHHHHHHHHHHHHHHHhhCCCEEEeeccceEEEEEEecCC-CCCccHHHHHHHHHHHHH-CCeEEeccCCC--
Confidence 4 4888888888888888876421 11 112345778888774321 111233445667776554 69999875321
Q ss_pred ccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 443 DKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 443 ~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
.+.|||+|+..+|++++++++++|+++++
T Consensus 391 -----~~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 391 -----GNIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred -----CCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 13499999999999999999999998874
No 97
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=2.6e-36 Score=300.12 Aligned_cols=332 Identities=18% Similarity=0.266 Sum_probs=251.9
Q ss_pred ccCCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHh
Q 011567 90 RCEPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAK 165 (483)
Q Consensus 90 ~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~ 165 (483)
+..|..+.+++|.++| .||++||||.++ ..+|| +||++.+|+++|+++.... ++ . + .++...+++++|++
T Consensus 4 ~~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~~~~~--~~-~-~-~~~~~~~la~~l~~ 77 (364)
T PRK04013 4 YRKRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGH-NHPEWVEEMSEQLEKLVVA--GP-M-F-EHEEKEEMLEELSK 77 (364)
T ss_pred cCCCccEEEeecCEEEECCCCEEEEcccChhhccCCC-CCHHHHHHHHHHHHhcCCc--cC-C-c-CCHHHHHHHHHHHh
Confidence 3457789999999999 899999999987 67999 8999999999999985321 21 1 2 35778999999999
Q ss_pred hhCCCCEEEecccHHHHHhhhhh---hccCCcEEEEcCCchhHHHhHhhhcC------------CeEEEecCCCHHHHHH
Q 011567 166 FLGTPDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSR------------STVVYFKHNDMDSLRN 230 (483)
Q Consensus 166 ~~g~e~~i~~~sG~~a~~~ai~~---~~~~gdiI~~~~~~h~s~~~g~~~s~------------~~v~~~~~~d~~~Le~ 230 (483)
+.+.+.+++++||++|++.|++. +++|..+|.++..||+.....+.+++ ..+..++.+|.+.+++
T Consensus 78 ~~~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~ 157 (364)
T PRK04013 78 WVNYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKE 157 (364)
T ss_pred hcCCCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHHH
Confidence 99888888889999999999865 45677899999999998766665432 1245567788888887
Q ss_pred HHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCcc-ccccCCCCC
Q 011567 231 TLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGL-TEHCGVPVD 305 (483)
Q Consensus 231 ~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~-~~~~~v~~~ 305 (483)
.+.+ .+++|++||+++++|.+.| |++|+++|++||+++|+||++++. ++|.++ .+++++.|
T Consensus 158 ~i~~----------~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~---RtG~~~a~~~~gv~P- 223 (364)
T PRK04013 158 AITK----------ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL---RTGKFLAIEHYKVEP- 223 (364)
T ss_pred HhcC----------CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC---CCCchhHHHhcCCCC-
Confidence 7742 3899999999999887665 999999999999999999999853 566654 47899988
Q ss_pred ceeEEEccccccccCCCce----eeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Q 011567 306 KIDIVTAAMGHALATEGGF----CTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILR 381 (483)
Q Consensus 306 ~~Di~~~s~~K~lg~~GG~----i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~ 381 (483)
||+ +++|++| ||+ ++.+.++ ....++.+| +.||+.|+++.++|+.+++++ +.++.++. +.
T Consensus 224 --Div--~~gK~lg--gG~P~~a~~~~~~~----~~~~~~~T~--~gnp~~~aaa~a~l~~i~~~~-l~~~~~~~---l~ 287 (364)
T PRK04013 224 --DIV--TMGKGIG--NGVPVSLTLTNFDV----ERGKHGSTF--GGNPLACKAVAVTLRILRRER-LVEKAGEK---FI 287 (364)
T ss_pred --CEE--Eeccccc--CCceeEEEEecccc----cCCCcCCCC--CcCHHHHHHHHHHHHHHHhcc-HHHHHHHH---HH
Confidence 888 7999998 443 4455454 112233333 569999999999999998754 77776664 22
Q ss_pred HhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCH
Q 011567 382 TGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSE 461 (483)
Q Consensus 382 ~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ 461 (483)
.+.. +.+ ......+.++.+.+..+ ..++...+++ +|+++.+... +.||+.|+..+|+
T Consensus 288 -~l~~-~~v-~~vRG~Gl~~gve~~~~----------~~~i~~~~~~-~Gll~~~~g~---------~vlr~~Ppl~it~ 344 (364)
T PRK04013 288 -EIKG-ERV-VTTRGRGLMIGIVLKKP----------VGKYVEELQN-RGYLVHTAGQ---------RVIRLLPPLIISK 344 (364)
T ss_pred -Hhcc-Ccc-eeeeeCcEEEEEEeCCc----------HHHHHHHHHh-CCcEEeeCCC---------CEEEEeCCcccCH
Confidence 2322 211 11134577888888421 2356776665 5999865421 2399999999999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 011567 462 ADLVKACESLKRISAVVLR 480 (483)
Q Consensus 462 edi~~~~~~l~~~~~~~~~ 480 (483)
+|+++++++|++++.+++.
T Consensus 345 ~~i~~~~~~l~~~l~~~~~ 363 (364)
T PRK04013 345 DTMEEAKSAIEGVINDILG 363 (364)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999999999998764
No 98
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=1.4e-35 Score=302.97 Aligned_cols=347 Identities=19% Similarity=0.255 Sum_probs=245.4
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|+++++++|.|+| .||++||||.++ ..+|| +||+|.+|+++|+++... +........++.++|++.+
T Consensus 30 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~~~~~-------~~~~~~~~~~la~~l~~~~ 101 (431)
T PRK06209 30 APGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGH-AYPPVVEAVREALQDGCN-------FTRPSAIELDAAESFLELI 101 (431)
T ss_pred CCeEEEeccCCEEEeCCCCEEEEccccccchhcCC-CCHHHHHHHHHHHHhCcC-------CCCCCHHHHHHHHHHHHhC
Confidence 46789999999999 899999999987 67999 899999999999997421 2223445668899999988
Q ss_pred C-CCCEEEecccHHHHHhhhh---hhccCCcEEEE-cCCchhHH--HhHhh-hc-C------CeEEEecCCCHHHHHHHH
Q 011567 168 G-TPDSILYSYGLSTMFSAIP---CFCKKGDLIVA-DEGVHWGI--QNGLY-LS-R------STVVYFKHNDMDSLRNTL 232 (483)
Q Consensus 168 g-~e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~-~~~~h~s~--~~g~~-~s-~------~~v~~~~~~d~~~Le~~l 232 (483)
+ .+.+.+++||++|++.|++ .+++|..++.+ ...+|+.. ..+.. .+ + ..+..++|||+++|++++
T Consensus 102 p~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l 181 (431)
T PRK06209 102 DGADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRYNDIASLEALF 181 (431)
T ss_pred CccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccCCCCHHHHHHHH
Confidence 5 4566777999999999976 45677777776 44555310 00100 11 1 124578899999999998
Q ss_pred HHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEc
Q 011567 233 ERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTA 312 (483)
Q Consensus 233 ~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~ 312 (483)
++... ++++|++||++++.+...+|++|+++|++||++||+||++++ ++.++.|..+++++.| ||+
T Consensus 182 ~~~~~-------~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG--~~~~~~g~~~~~gv~P---Di~-- 247 (431)
T PRK06209 182 EDHPG-------RIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMITG--FRWHMRGAQKLYGIVP---DLS-- 247 (431)
T ss_pred HhCCC-------CEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEccccc--CCcCcchhhHHhCCCc---cee--
Confidence 75332 488999999997744444499999999999999999999964 2445566767789987 886
Q ss_pred cccccccC--CCceeeccHHHHHH--HHh--cCCceeecC--CCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 313 AMGHALAT--EGGFCTGSARVVDH--QRL--SSSGYVFSA--SLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 313 s~~K~lg~--~GG~i~~~~~~~~~--~~~--~~~~~~fs~--~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
+++|++|. ++|++++++++++. +.. ....+.+++ +.||+.|++++++|++++++ ++.++++++.++|++.|
T Consensus 248 t~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~-~~~~~~~~~g~~l~~~L 326 (431)
T PRK06209 248 CFGKALGNGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDE-DVIERLHEQGAKLAAGV 326 (431)
T ss_pred eehhhhcCCcccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhcc-CHHHHHHHHHHHHHHHH
Confidence 79999973 56778899999887 321 123343443 45789999999999999876 48999999999999988
Q ss_pred ccC---CCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCH
Q 011567 385 SDI---HGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSE 461 (483)
Q Consensus 385 ~~~---~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ 461 (483)
+++ .++.......+..+.+.+.........+......+...+++ +|+++.+ ++++..||+
T Consensus 327 ~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~p~----------------l~is~~ht~ 389 (431)
T PRK06209 327 NEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIR-RGVLMPS----------------LVVSYAHGD 389 (431)
T ss_pred HHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHH-CCccccc----------------ccccccCCH
Confidence 653 13221111112222222211000001122233456666655 5997621 345578999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011567 462 ADLVKACESLKRISAVV 478 (483)
Q Consensus 462 edi~~~~~~l~~~~~~~ 478 (483)
+||+++++++++++.++
T Consensus 390 ~dId~~l~~l~~~l~~~ 406 (431)
T PRK06209 390 ADIERTIDAVHGALGVY 406 (431)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999876
No 99
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.1e-34 Score=293.40 Aligned_cols=341 Identities=21% Similarity=0.297 Sum_probs=260.3
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|+++++++|.++| .||++||||.++ +++|+ +||++.+++.+++++.... +. .+..+...+++++|+++.
T Consensus 21 ~~~~~~~~~G~~~~d~dg~~~iD~~~g~~~~~lG~-~~p~v~~a~~~~~~~~~~~---~~--~~~~~~~~~la~~l~~~~ 94 (396)
T PRK02627 21 LPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGH-CHPKLVEAIQEQAAKLIHT---SN--LYYIEPQEELAEKLVELS 94 (396)
T ss_pred CCceEEeeeeCEEEeCCCCEEEECCccHHhccCCC-CCHHHHHHHHHHHhhcccc---cc--ccCCHHHHHHHHHHHhhc
Confidence 36789999999999 899999999995 78999 8899999999999875321 11 124678899999999999
Q ss_pred CCCCEEEecccHHHHHhhhhhhc---cC-----CcEEEEcCCchhHHHhHhhhcCC------------eEEEecCCCHHH
Q 011567 168 GTPDSILYSYGLSTMFSAIPCFC---KK-----GDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHNDMDS 227 (483)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~~~~---~~-----gdiI~~~~~~h~s~~~g~~~s~~------------~v~~~~~~d~~~ 227 (483)
|.++++++++|++|+..+++++. ++ .+++..+..+|+....++..++. .+..++++|+++
T Consensus 95 ~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 174 (396)
T PRK02627 95 GMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEA 174 (396)
T ss_pred CCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHH
Confidence 99888899999999999988543 33 45788889999887666665432 235567889999
Q ss_pred HHHHHHHhhhhhhhccCccEEEEEecccCCCCCc-cC---hHHHHHHHHHcCcEEEEeCccccccccCCCCcc-ccccCC
Q 011567 228 LRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQI-AP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGL-TEHCGV 302 (483)
Q Consensus 228 Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i-~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~-~~~~~v 302 (483)
+++.+.. ++++|++||+++++|.. .| +++|+++|++||++||+||+|++ +|++|.+. .+++++
T Consensus 175 l~~~i~~----------~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g--~g~~g~~~~~~~~~~ 242 (396)
T PRK02627 175 LKAAITD----------KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTG--MGRTGKLFAYQHYGI 242 (396)
T ss_pred HHHhcCC----------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcC--CCccCceeeehhcCC
Confidence 9887732 37899999999888843 33 89999999999999999999984 46666543 356777
Q ss_pred CCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Q 011567 303 PVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAIL 380 (483)
Q Consensus 303 ~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l 380 (483)
.| |++ ||||++++ +-|++++++++++.+.......+| +.+|+.++++.++++.+++. +..++++++.+++
T Consensus 243 ~p---di~--t~sK~~~~G~rig~~~~~~~~~~~~~~~~~~~t~--~~~~~~~~aa~~~l~~~~~~-~~~~~~~~~~~~~ 314 (396)
T PRK02627 243 EP---DIM--TLAKGLGGGVPIGAVLAKEKVADVFTPGDHGSTF--GGNPLACAAALAVIEIIEEE-GLLENAAEVGEYL 314 (396)
T ss_pred CC---CEE--EEcchhhCCcccEEEEEcHHHHhccCCCCCCCCC--CCCHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHH
Confidence 66 765 79999983 237888999998887543333344 45899999999999988754 4778888888888
Q ss_pred HHhhccCC-Ccee--ecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccC
Q 011567 381 RTGLSDIH-GLSI--ASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSA 457 (483)
Q Consensus 381 ~~~L~~~~-~~~i--~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~ 457 (483)
++.|.++. .++. ...+.+.++++.+.. ...+++..++++ ||++.+... ..+|++++.
T Consensus 315 ~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~----------~~~~~~~~l~~~-Gv~v~~~~~---------~~lRi~~~~ 374 (396)
T PRK02627 315 RAKLRELLEKYPGIKEVRGLGLMIGIELDR----------PAAEIVKKALEK-GLLINVTGD---------NVLRLLPPL 374 (396)
T ss_pred HHHHHHHHHhCCCeeeeccCcEEEEEEecC----------cHHHHHHHHHHC-CeEEeecCC---------CEEEEECCc
Confidence 88876641 1211 112346677777621 134677777665 999987531 339999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q 011567 458 AHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 458 ~~t~edi~~~~~~l~~~~~~~ 478 (483)
.+|++++++++++|++++++.
T Consensus 375 ~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 375 IISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred ccCHHHHHHHHHHHHHHHHhh
Confidence 999999999999999998765
No 100
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=3.3e-35 Score=300.34 Aligned_cols=340 Identities=16% Similarity=0.187 Sum_probs=242.8
Q ss_pred ccccCCCCeEE-E-CCeeEEEeecC---CCCCCCCChHHH--HHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 95 VLESAAGPHTI-I-SGKEVVNFASA---NYLGLIGHEKLL--ESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 95 ~i~~~~g~~~~-~-~G~~~id~~s~---~~lG~~~~p~i~--~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.+++++|.++| . ||++||||.++ ..+|| +||+|. +|+.+++++.......+. ....+...++.++|++.+
T Consensus 22 ~~~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh-~~p~v~~~~ai~~q~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~ 98 (431)
T TIGR03251 22 DLDRSRGSVLVDARDGRRYLDMFSFFASMALGM-NHPALVDDLAFRARLGAAAVNKPSNS--DVYTVAMARFVDTFARVL 98 (431)
T ss_pred EEEeccCCEEEECCCCCChhhcccChhhcCCCC-CChhhhHHHHHHHHHHHhhhcccccC--CCCCHHHHHHHHHHHHhc
Confidence 35999999999 5 89999999997 67999 899999 999999987421111111 123466678888888875
Q ss_pred C---CCCEEEecccHHHHHhhhhhh---c-------c-----CCcEEEEcCCchhHHHhHhhhcCCeEE-----------
Q 011567 168 G---TPDSILYSYGLSTMFSAIPCF---C-------K-----KGDLIVADEGVHWGIQNGLYLSRSTVV----------- 218 (483)
Q Consensus 168 g---~e~~i~~~sG~~a~~~ai~~~---~-------~-----~gdiI~~~~~~h~s~~~g~~~s~~~v~----------- 218 (483)
+ .+.+++.+||++|++.|++.. + + +..+|.+..+||+.+..++.+++....
T Consensus 99 ~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~ 178 (431)
T TIGR03251 99 GDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWP 178 (431)
T ss_pred CCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCc
Confidence 2 356677799999999998654 2 1 346888999999998877766553100
Q ss_pred -------EecC-------------CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHc
Q 011567 219 -------YFKH-------------NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKY 274 (483)
Q Consensus 219 -------~~~~-------------~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~ 274 (483)
.++. ++++++++.++. .+..+++|++||+++++|.+.| |++|+++|++|
T Consensus 179 ~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~ 251 (431)
T TIGR03251 179 RIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAE-------RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEH 251 (431)
T ss_pred cCCCCcccCCccccccchhhHHHHHHHHHHHHHHHh-------CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHc
Confidence 0011 112233334432 2235899999999999998765 99999999999
Q ss_pred CcEEEEeCccccccccCCCCcc-ccccCCCCCceeEEEccccccccCCCceeeccH--HHHHH-HH-hcCCceeecCCCc
Q 011567 275 RFRVFLDESNSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALATEGGFCTGSA--RVVDH-QR-LSSSGYVFSASLP 349 (483)
Q Consensus 275 ~~~li~DEa~s~g~lg~~G~g~-~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~--~~~~~-~~-~~~~~~~fs~~~~ 349 (483)
|++||+||++++ +|++|.++ .+++|+.| ||+ +++|++ +.||++.+++ ++.+. +. ...+..+| +.+
T Consensus 252 g~llI~DEV~tG--~GrtG~~~a~~~~gv~P---Di~--~~gK~~-~~~g~~~~~~i~~~~~~~~~~~~~~~~T~--~gn 321 (431)
T TIGR03251 252 DALLIFDEVQTG--VGLTGTAWAYQQLGVQP---DIV--AFGKKT-QVCGIMAGRRVDEVADNVFAVPSRLNSTW--GGN 321 (431)
T ss_pred CCEEEEecchhc--cCccchHHHHHhcCCCC---CEE--EecccC-ccceEEecchHHHhhhhcccCccccCCCC--CCC
Confidence 999999999984 57787765 48899988 898 689998 4467776654 22321 11 11122333 468
Q ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccC----CCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHH
Q 011567 350 PYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDI----HGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADW 425 (483)
Q Consensus 350 p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~----~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~ 425 (483)
|+.++++.++|+.+++. .+.++++++.+++++.|+++ +++.....+.+.++.+.+.+ .....++...
T Consensus 322 pl~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~--------~~~~~~~~~~ 392 (431)
T TIGR03251 322 LVDMVRATRILEIIEEE-RLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPS--------TADRDEVIRQ 392 (431)
T ss_pred HHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCC--------HHHHHHHHHH
Confidence 99999999999999765 47889999999999888664 11222223457788888732 1234467776
Q ss_pred HHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHH
Q 011567 426 ALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 426 ~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
+++ +||++.+... ..+|++|+..+|++||+++++++++
T Consensus 393 l~~-~Gvl~~~~g~---------~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 393 LYR-EGVLLLGCGE---------RSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred HHh-CCeEEecCCC---------CeEEEECCccCCHHHHHHHHHHHHh
Confidence 664 6999865421 3399999999999999999999976
No 101
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=8e-34 Score=290.62 Aligned_cols=358 Identities=18% Similarity=0.231 Sum_probs=261.0
Q ss_pred CCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh
Q 011567 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (483)
Q Consensus 92 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~ 167 (483)
.|.++++++|.++| .||++||||.++ ..+|| +||++.+++.+++++++... .+ .+ ..+...++.+.|++..
T Consensus 23 ~p~~~~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh-~~~~i~~a~~~~~~~~~~~~-~~--~~-~~~~~~~la~~l~~~~ 97 (425)
T PRK08088 23 HPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGH-LHPKVVAAVEAQLKKLSHTC-FQ--VL-AYEPYLELCEKMNQKV 97 (425)
T ss_pred CCceEEeeeeCEEEeCCCCEEEEcCCchhhcCCCC-CCHHHHHHHHHHHhhCCCcc-cc--cc-CCHHHHHHHHHHHHhC
Confidence 46789999999999 899999999987 67999 89999999999999865311 11 11 2356679999999988
Q ss_pred CC---CCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcCCeE-------------E--Eec--CCC
Q 011567 168 GT---PDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRSTV-------------V--YFK--HND 224 (483)
Q Consensus 168 g~---e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v-------------~--~~~--~~d 224 (483)
+. ++.++.+||++|++.|++ ++++|+++|.++..||+.......+++... . .++ .++
T Consensus 98 ~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 177 (425)
T PRK08088 98 PGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHG 177 (425)
T ss_pred CCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccC
Confidence 64 466777999999998864 567899999999999998877666543210 0 111 121
Q ss_pred ------HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCC
Q 011567 225 ------MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGR 294 (483)
Q Consensus 225 ------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~ 294 (483)
+++|+++++... .+...++|++||++++.|.+.| +++|+++|++||+++|+||+|++ +|++|.
T Consensus 178 ~~~~~~~~~l~~~l~~~~-----~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g--~g~~g~ 250 (425)
T PRK08088 178 VSEDDAIASIERIFKNDA-----APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTG--AGRTGT 250 (425)
T ss_pred ccHHHHHHHHHHHHHhcc-----CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcCcc
Confidence 445666664211 1124899999999999888776 99999999999999999999985 566666
Q ss_pred cc-ccccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHH
Q 011567 295 GL-TEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLIT 371 (483)
Q Consensus 295 g~-~~~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~ 371 (483)
+. .+++++.| |+. ||||++++ +-|++++++++++.+.......+| +.+|+.++++.+.|+.++.. ++.+
T Consensus 251 ~~~~~~~~~~p---di~--s~sK~l~~G~rig~v~~~~~~~~~~~~~~~~~t~--~~~~~~~~a~~~~l~~~~~~-~~~~ 322 (425)
T PRK08088 251 LFAMEQMGVAA---DLT--TFAKSIAGGFPLAGVTGRAEVMDAIAPGGLGGTY--AGNPIACAAALAVLKVFEQE-NLLQ 322 (425)
T ss_pred hhHHhhcCCCC---CEE--EEeccccCCCcceeeEecHHHHhhcCCCCCCCCC--CcCHHHHHHHHHHHHHHHhc-CHHH
Confidence 54 35677665 654 89999972 226799999999988655444344 46899999999999988654 4788
Q ss_pred HHHHHHHHHHHhhccCC-Ccee--ecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCC
Q 011567 372 KLKKNTAILRTGLSDIH-GLSI--ASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLP 448 (483)
Q Consensus 372 ~l~~~~~~l~~~L~~~~-~~~i--~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~ 448 (483)
++++..+++++.|.++. .++. ...+.+.++++.+..+......+.....++...+++ +||++.+.... +
T Consensus 323 ~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~-~Gv~~~~~~~~-------~ 394 (425)
T PRK08088 323 KANALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKPNAKLTAQIVARARD-KGLILLSCGPY-------Y 394 (425)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEecCCCCCCCCHHHHHHHHHHHHh-CCCEEecCCCC-------C
Confidence 88888888888776542 1211 112347788888843221111123446678887766 58887643211 2
Q ss_pred CceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 449 VGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 449 ~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
+.||++++..+|++||++++++|++++.+
T Consensus 395 ~~iRl~~~~~~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 395 NVLRILVPLTIEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred CEEEEECCCCcCHHHHHHHHHHHHHHHHh
Confidence 45999999999999999999999999865
No 102
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.8e-34 Score=270.39 Aligned_cols=347 Identities=22% Similarity=0.292 Sum_probs=255.2
Q ss_pred cCCCccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q 011567 91 CEPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKF 166 (483)
Q Consensus 91 ~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~ 166 (483)
..|.++++.+|.+++ .+|++||||+++ .-+|| .||++.+++.+++.+.+..+.+ +-+.+ ..++++.|.+.
T Consensus 37 ~~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Gh-anpev~ral~~q~~k~~hs~~~----~~t~e-av~l~~~l~~~ 110 (433)
T KOG1401|consen 37 RYPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGH-ANPEVARALAEQAKKLGHSSNG----YFTLE-AVELEEVLSAV 110 (433)
T ss_pred CCceeeecceeeeeecCCcceeeeeccceeccccCC-CCHHHHHHHHHHHhhheeccCc----cccHH-HHHHHHHHHhc
Confidence 446788999999999 899999999998 78999 6999999999999998764433 22444 88999999999
Q ss_pred h---CCCCEEEecccHHHHHhhhhhhc---cC------CcEEEEcCCchhHHHhHhhhcC------------CeEEEecC
Q 011567 167 L---GTPDSILYSYGLSTMFSAIPCFC---KK------GDLIVADEGVHWGIQNGLYLSR------------STVVYFKH 222 (483)
Q Consensus 167 ~---g~e~~i~~~sG~~a~~~ai~~~~---~~------gdiI~~~~~~h~s~~~g~~~s~------------~~v~~~~~ 222 (483)
. ..+.+.+++||++|++.|++... .. ..+|.+..+||+....++...+ ..+..+.+
T Consensus 111 ~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~y 190 (433)
T KOG1401|consen 111 LGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEY 190 (433)
T ss_pred ccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeeccc
Confidence 9 46678888999999999986432 22 2489999999998887776432 24566788
Q ss_pred CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCC-ccc
Q 011567 223 NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGR-GLT 297 (483)
Q Consensus 223 ~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~-g~~ 297 (483)
||+.++++.++.+..+ +++||+||+++.+|.+++ |..|+++|+++|+++|.||++++ +||+|. |..
T Consensus 191 nd~t~l~k~~~~h~~~-------IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG--~gR~g~~~a~ 261 (433)
T KOG1401|consen 191 NDSTALEKLFESHKGE-------IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTG--LGRLGYGWAQ 261 (433)
T ss_pred CCHHHHHHHHHhCCCc-------eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhC--ccccchHHHH
Confidence 9999999999987654 899999999999777665 89999999999999999999976 445554 456
Q ss_pred cccCCCCCceeEEEccccccccCCCc----eeeccHHHHHHHHhcCC---ceeecCCCcHHHHHHHHHHHHHHhcCcHHH
Q 011567 298 EHCGVPVDKIDIVTAAMGHALATEGG----FCTGSARVVDHQRLSSS---GYVFSASLPPYLASAAITAIDVLEENPDLI 370 (483)
Q Consensus 298 ~~~~v~~~~~Di~~~s~~K~lg~~GG----~i~~~~~~~~~~~~~~~---~~~fs~~~~p~~~aaa~~al~~l~~~~~~~ 370 (483)
+++++.| ||. |++|.|| || ...+++++++.+....+ +.+|++ ||++|+++..+++.+.+ ++..
T Consensus 262 e~~~~~P---DI~--t~aK~L~--gGlPigA~~v~~kV~~~i~~~~~l~hg~Tf~g--npLacsa~~~~l~~l~~-~e~~ 331 (433)
T KOG1401|consen 262 EYFGVTP---DIT--TVAKPLG--GGLPIGATGVRDKVAEMISPGDHLYHGGTFSG--NPLACSAGIKVLDELKD-PETL 331 (433)
T ss_pred HHhCcCC---cce--eehhhcc--CCceeEEEeehHHHHhhcCCCCccccCcccCC--ChhhhhHHHHHHHHHcC-HHHH
Confidence 8999998 887 8999998 44 45678999999887666 556655 89999999999999876 5688
Q ss_pred HHHHHHHHHHHHhhccCC---Cceeec-CCCCCEEEEEecCCCCCchhhHH----HHHHHHHHHHHhCCEEEEeeccccc
Q 011567 371 TKLKKNTAILRTGLSDIH---GLSIAS-NPESPIVFLILEKSTGSMKNDLQ----LLEDIADWALKEDGVFVVTSKRSML 442 (483)
Q Consensus 371 ~~l~~~~~~l~~~L~~~~---~~~i~~-~~~~~i~~l~l~~~~~~~~~~~~----~~~~i~~~~l~~~Gv~v~~~~~~~~ 442 (483)
+++.+..+.|++.|.+.- .-.+.+ ..+..++++.+..+.-....... .........++ .|+++.|..
T Consensus 332 k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~-~gv~i~P~~---- 406 (433)
T KOG1401|consen 332 KNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLE-EGVRIAPIY---- 406 (433)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhccccc-ceEEEeccc----
Confidence 899998888888886531 111222 23344555554322111111111 11111111111 144444310
Q ss_pred ccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 443 DKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 443 ~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
.++..+|+|.+++.++++.+.+.++
T Consensus 407 -----------~l~~~~~~E~i~~~l~i~~~~l~~~ 431 (433)
T KOG1401|consen 407 -----------LLTVEHTPEVIQRLLTILEKVLSAL 431 (433)
T ss_pred -----------cccccCcHHHHHHHHHHHHHHHHHh
Confidence 0234467999999999999988765
No 103
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1e-33 Score=285.89 Aligned_cols=333 Identities=18% Similarity=0.222 Sum_probs=248.2
Q ss_pred CCccccCCCCeEE-ECCeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh-CC
Q 011567 93 PPVLESAAGPHTI-ISGKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL-GT 169 (483)
Q Consensus 93 ~~~i~~~~g~~~~-~~G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~-g~ 169 (483)
|.++++++|.|+| .||++||||.++ .++++..||++.+++.+++++++... . ..+.++++.+++.+ +.
T Consensus 12 ~~~~~~~~G~~l~d~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~~~~---~------~~~~~~~~~la~~l~~~ 82 (375)
T PRK04260 12 AIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIWHSP---N------LYLNSLQEEVAQKLIGD 82 (375)
T ss_pred CceEEEeeeCEEEeCCCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcCccc---C------ccCCHHHHHHHHHHhcC
Confidence 5678999999999 899999999997 56656558999999999998854321 0 12344555666544 32
Q ss_pred CC--EEEecccHHHHHhhhhhh---ccCCcEEEEcCCchhHHHhHhhhcCCe------------EEEecCCCHHHHHHHH
Q 011567 170 PD--SILYSYGLSTMFSAIPCF---CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHNDMDSLRNTL 232 (483)
Q Consensus 170 e~--~i~~~sG~~a~~~ai~~~---~~~gdiI~~~~~~h~s~~~g~~~s~~~------------v~~~~~~d~~~Le~~l 232 (483)
.. +++++||++|+..|++.. +++.++|..+..+|+++..++..++.+ +...+++|++++++.+
T Consensus 83 ~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l 162 (375)
T PRK04260 83 KDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALV 162 (375)
T ss_pred cCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhc
Confidence 23 456699999999887764 677888999999999988777665432 2233578999988876
Q ss_pred HHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cccCCCCCce
Q 011567 233 ERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EHCGVPVDKI 307 (483)
Q Consensus 233 ~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~~~v~~~~~ 307 (483)
.+ .+++|++|++++++|.+.| |+++.++|++||+++|+||+|++ +|++|.++. +++++.|
T Consensus 163 ~~----------~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g--~g~~g~~~~~~~~~~~p--- 227 (375)
T PRK04260 163 NK----------NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTG--MGRTGKLYAFEHYGIEP--- 227 (375)
T ss_pred CC----------CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhC--CCcccchhhhHhhCCCC---
Confidence 32 3689999999999998876 89999999999999999999973 678776643 5778877
Q ss_pred eEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhc
Q 011567 308 DIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLS 385 (483)
Q Consensus 308 Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~ 385 (483)
|++ ||||++++ +.|++++++++.+.+.......+| +.+|+.++++.++++.++.. +..++++++.+.+++.|.
T Consensus 228 di~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~--~~~~~~~~aa~a~l~~~~~~-~~~~~~~~~~~~~~~~l~ 302 (375)
T PRK04260 228 DIF--TLAKGLANGVPVGAMLAKSSLGGAFGYGSHGSTF--GGNKLSMAAASATLDIMLTA-GFLEQALENGNYLQEQLQ 302 (375)
T ss_pred CEE--EecccccCCcceEEEEEcHHHHhhcCCCCCCCCC--CcCHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHH
Confidence 765 89999973 458888999988887644334444 35899999999999988754 577888888888888776
Q ss_pred cC-CCce--eecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHH
Q 011567 386 DI-HGLS--IASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEA 462 (483)
Q Consensus 386 ~~-~~~~--i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e 462 (483)
++ ...+ ......+.++++.+... ..++.+++++ +||++.+.. +..||++++..+|++
T Consensus 303 ~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~~-~Gi~v~~~~---------~~~lR~~~~~~~t~~ 362 (375)
T PRK04260 303 KALQDKETVTTVRGLGYMIGIETTAD----------LSQLVEAARD-KGLIVLTAG---------TNVIRLLPPLTLTKE 362 (375)
T ss_pred HHHhhCCCeeEEeccceEEEEEecCc----------HHHHHHHHHh-CCCEEecCC---------CCEEEEcCCCccCHH
Confidence 53 1111 11123677788877311 2356776555 599986532 244999999999999
Q ss_pred HHHHHHHHHHHH
Q 011567 463 DLVKACESLKRI 474 (483)
Q Consensus 463 di~~~~~~l~~~ 474 (483)
|+++++++++++
T Consensus 363 ~i~~~l~~l~~~ 374 (375)
T PRK04260 363 EIEQGIAILSEV 374 (375)
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
No 104
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=3e-33 Score=300.18 Aligned_cols=357 Identities=15% Similarity=0.140 Sum_probs=252.5
Q ss_pred CCCccccCCCC----eEE-ECCe----eEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHH
Q 011567 92 EPPVLESAAGP----HTI-ISGK----EVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDC 159 (483)
Q Consensus 92 ~~~~i~~~~g~----~~~-~~G~----~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l 159 (483)
.+.+|++++|. |++ .+|+ +|||++++ ..+||.+||+|.+|+.+|+.+++.-+ . ...+++...+|
T Consensus 339 ~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~-~---~~~~hepa~~L 414 (817)
T PLN02974 339 SVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVM-F---PENVHEPALRA 414 (817)
T ss_pred CceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCccc-c---CccCCHHHHHH
Confidence 46788999998 888 7998 99999997 66774379999999999999986522 1 12256888999
Q ss_pred HHHHHhhhCC---CCEEEecccHHHHHhhhhhh----c------------------cCCcEEEEcCCchhHHHhHhhhcC
Q 011567 160 EARIAKFLGT---PDSILYSYGLSTMFSAIPCF----C------------------KKGDLIVADEGVHWGIQNGLYLSR 214 (483)
Q Consensus 160 ~~~La~~~g~---e~~i~~~sG~~a~~~ai~~~----~------------------~~gdiI~~~~~~h~s~~~g~~~s~ 214 (483)
+++|++..+. +++++.++|++|++.|++.. + +|..+|....+||+.+..++.+++
T Consensus 415 Ae~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg 494 (817)
T PLN02974 415 AELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQA 494 (817)
T ss_pred HHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCC
Confidence 9999997652 45666699999999997643 2 245689999999999888877665
Q ss_pred Ce--------E------EEecC----------------C--C-----------------------------HHHHHHHHH
Q 011567 215 ST--------V------VYFKH----------------N--D-----------------------------MDSLRNTLE 233 (483)
Q Consensus 215 ~~--------v------~~~~~----------------~--d-----------------------------~~~Le~~l~ 233 (483)
.. . .+++. + + .+.+++.|+
T Consensus 495 ~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~ 574 (817)
T PLN02974 495 PSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLD 574 (817)
T ss_pred chhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHH
Confidence 21 0 00100 0 0 023444443
Q ss_pred HhhhhhhhccCccEEEEEecc-cCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCCCcc-ccccCCCCCce
Q 011567 234 RVTADNKRAKKLRRYIVVEAV-YQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGL-TEHCGVPVDKI 307 (483)
Q Consensus 234 ~~~~~~~~~~~~~~~iv~e~v-~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~-~~~~~v~~~~~ 307 (483)
+... ...+.++++|++||+ ++.+|.+.| +++|+++|++||++||+||++++ +||+|+++ ++++|+.|
T Consensus 575 ~~~~--~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TG--fGRtG~~fa~e~~gv~P--- 647 (817)
T PLN02974 575 EYEA--SAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTG--LWRLGVESAWELLGCKP--- 647 (817)
T ss_pred hhcc--ccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccC--CCcccchhhHHhcCCCC---
Confidence 2110 012346899999996 787787766 89999999999999999999986 57777766 48999998
Q ss_pred eEEEccccccccCCCce-----eeccHHHHHHHHhc------CCceeecCCCcHHHHHHHHHHHHHHhcCc---HHHHHH
Q 011567 308 DIVTAAMGHALATEGGF-----CTGSARVVDHQRLS------SSGYVFSASLPPYLASAAITAIDVLEENP---DLITKL 373 (483)
Q Consensus 308 Di~~~s~~K~lg~~GG~-----i~~~~~~~~~~~~~------~~~~~fs~~~~p~~~aaa~~al~~l~~~~---~~~~~l 373 (483)
||+ +++|+++ ||| +++++++++.+... .++++|+ .||+.|++++++|+++++.+ .+.++.
T Consensus 648 DIi--~~gKgLt--gG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~--gnpl~cAaala~L~~~~~~~~~~~l~~~~ 721 (817)
T PLN02974 648 DIA--CYAKLLT--GGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYT--AHPMGCAAAAKALQWYKDPSTNPNLIPPG 721 (817)
T ss_pred CEE--eeccccc--CCCCccEEEEEcHHHHHhhccccccCCcccCCCCC--cCHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 898 7999998 664 57899999987421 2444554 59999999999999998753 344555
Q ss_pred HHHHHHHHHhh-ccCCCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCc
Q 011567 374 KKNTAILRTGL-SDIHGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVG 450 (483)
Q Consensus 374 ~~~~~~l~~~L-~~~~~~~i~~--~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~ 450 (483)
.++.+++.+.| +.+..++.+. ...+.+..+.+.++............++.+.++.++|+++++.. +.
T Consensus 722 ~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~G----------nv 791 (817)
T PLN02974 722 SRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLG----------NV 791 (817)
T ss_pred HHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecC----------CE
Confidence 55555556555 2222222211 34577888888643221111223456777777625699998642 22
Q ss_pred eEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 451 IRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 451 lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
||+.+++.+++++++++++++.+.+
T Consensus 792 i~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 792 VYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 8999999999999999999998765
No 105
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=3.8e-33 Score=282.58 Aligned_cols=338 Identities=21% Similarity=0.321 Sum_probs=253.4
Q ss_pred cCCCccccCCCCeEE-ECCeeEEEeec---CCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q 011567 91 CEPPVLESAAGPHTI-ISGKEVVNFAS---ANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKF 166 (483)
Q Consensus 91 ~~~~~i~~~~g~~~~-~~G~~~id~~s---~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~ 166 (483)
+.|.++++++|.+++ .||++||||++ +++||+ .+|.+.+++.+++++++.. ++ .| ..+.+.+|+++++++
T Consensus 8 ~~~~~~~~~~g~~~~~~~g~~~id~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~---~~-~~-~~~~~~~l~~~la~~ 81 (379)
T TIGR00707 8 RLPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGH-AHPKLVEALKEQLEKLVHV---SN-LY-YTEPQEELAEKLVEH 81 (379)
T ss_pred CCCccEEEeecCEEEeCCCCEEEEcCcchhhccCCC-CCHHHHHHHHHHHhhcccc---cc-cc-CCHHHHHHHHHHHhh
Confidence 357789999999999 79999999999 489999 8999999999999986431 11 12 457899999999999
Q ss_pred hCCCCEEEecccHHHHHhhhhhh---cc-----CCcEEEEcCCchhHHHhHhhhcC------------CeEEEecCCCHH
Q 011567 167 LGTPDSILYSYGLSTMFSAIPCF---CK-----KGDLIVADEGVHWGIQNGLYLSR------------STVVYFKHNDMD 226 (483)
Q Consensus 167 ~g~e~~i~~~sG~~a~~~ai~~~---~~-----~gdiI~~~~~~h~s~~~g~~~s~------------~~v~~~~~~d~~ 226 (483)
+|.++++++++|++|+..+++++ ++ +..+|+.+..||+....+...++ .....+++||++
T Consensus 82 ~g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 161 (379)
T TIGR00707 82 SGADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIE 161 (379)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHH
Confidence 99998899999999999998755 33 24456667778876555443322 123456778999
Q ss_pred HHHHHHHHhhhhhhhccCccEEEEEecccCCCCCcc-C---hHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cccC
Q 011567 227 SLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIA-P---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EHCG 301 (483)
Q Consensus 227 ~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~-~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~~~ 301 (483)
++++.+.+ .+++|+++|+++++|... + +++|.++|++||+++|+||+|+. +|++|.+.. ...+
T Consensus 162 ~l~~~~~~----------~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~--~~~~g~~~~~~~~~ 229 (379)
T TIGR00707 162 SLKKAIDD----------ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTG--IGRTGKFFAYEHYG 229 (379)
T ss_pred HHHHHhhh----------CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCccchhhhHHhcC
Confidence 99887753 257888899988877653 3 89999999999999999999973 455555443 4556
Q ss_pred CCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q 011567 302 VPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAI 379 (483)
Q Consensus 302 v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~ 379 (483)
+.+ |++ |+||++++ +.||+++++++++.++.......|+ .+|+.++++.++|+.++. ++..+++++++++
T Consensus 230 ~~~---d~~--t~sK~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~aa~aaL~~~~~-~~~~~~~~~~~~~ 301 (379)
T TIGR00707 230 IEP---DII--TLAKGLGGGVPIGATLAKEEVAEAFTPGDHGSTFG--GNPLACAAALAVLEVIEK-ERLLENVKEKGDY 301 (379)
T ss_pred CCC---CEE--EEcccccCCcccEEEEEcHHHHhhhcCCCCCCCCC--CCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHH
Confidence 655 665 79999982 2388999999999887544444454 588999999999998764 3578899999999
Q ss_pred HHHhhccCCCcee--e-cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEcc
Q 011567 380 LRTGLSDIHGLSI--A-SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVS 456 (483)
Q Consensus 380 l~~~L~~~~~~~i--~-~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~ 456 (483)
+++.|.++ +... . ..+.+.++++.+.++ ..++.+.+ .++||.+.+.. ++.+|++++
T Consensus 302 ~~~~l~~~-~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l-~~~Gv~v~~~~---------~~~lRi~~~ 360 (379)
T TIGR00707 302 FKERLEEL-GKNYPNKEVRGKGLMLGIELEAP----------CKDIVKKA-LEKGLLVNCAG---------PKVLRFLPP 360 (379)
T ss_pred HHHHHHHH-HhhCCCCccccCceEEEEEecCc----------HHHHHHHH-HHCCcEEeeCC---------CCEEEEECC
Confidence 99988764 2211 1 123466777776421 23566664 45699998742 134999999
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 011567 457 AAHSEADLVKACESLKRIS 475 (483)
Q Consensus 457 ~~~t~edi~~~~~~l~~~~ 475 (483)
..+|++++++++++|++++
T Consensus 361 ~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 361 LIITKEEIDEAVSALEEAI 379 (379)
T ss_pred CcCCHHHHHHHHHHHHHhC
Confidence 9999999999999998763
No 106
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=5e-33 Score=275.99 Aligned_cols=309 Identities=16% Similarity=0.219 Sum_probs=236.0
Q ss_pred CCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC--CCEEEecccHHHHHhhhhhhccCCc
Q 011567 117 ANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT--PDSILYSYGLSTMFSAIPCFCKKGD 194 (483)
Q Consensus 117 ~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~--e~~i~~~sG~~a~~~ai~~~~~~gd 194 (483)
+||||++.||.+++++.+.+++|| |+.+.|.+|++.+|+++|. ++++++++|++|+..++.++.++||
T Consensus 27 ~~ylgl~~~~~~~~~~~~~~~~~~----------g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd 96 (346)
T TIGR03576 27 YDLTGLAGGFKIDEEDLELLETYV----------GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGR 96 (346)
T ss_pred cccccCCCChhHHHHHHHHHHHhc----------CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCC
Confidence 589999999999999999999984 4668999999999999998 7889999999999999999999999
Q ss_pred EEEE---cCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCc---cChHHHH
Q 011567 195 LIVA---DEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQI---APLDELI 268 (483)
Q Consensus 195 iI~~---~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i---~~L~~l~ 268 (483)
.|++ |.++|.++..+++++|.+++ .++|+++++ .. . .+++|++++ ++++|++ .||++|+
T Consensus 97 ~Vli~~~d~p~~~s~~~~~~l~ga~~~--~~~~l~~l~----~~-~-------~~~lIiitg-~s~~G~v~~~~~L~~i~ 161 (346)
T TIGR03576 97 KVVHYLPEKPAHPSIPRSCKLAGAEYF--ESDELSELK----KI-D-------GTSLVVITG-STMDLKVVSEEDLKRVI 161 (346)
T ss_pred EEEECCCCCCCchhHHHHHHHcCCEEe--ccCCHHHHh----hC-c-------CceEEEEEC-CCCCCcccCHHHHHHHH
Confidence 8874 47899999999999998763 456665532 21 1 245667766 5788998 5799999
Q ss_pred HHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccc-cCCCceeeccHHHHHHHHhcCCceeecCC
Q 011567 269 RLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-ATEGGFCTGSARVVDHQRLSSSGYVFSAS 347 (483)
Q Consensus 269 ~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~l-g~~GG~i~~~~~~~~~~~~~~~~~~fs~~ 347 (483)
++|++||+++++||+|+.|+.|..|.+...+++ +|++++|+||++ |..|||+++++++++.++....++.|+
T Consensus 162 ~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~-----~divv~s~SKalaG~r~G~v~~~~~li~~l~~~~~~~~~s-- 234 (346)
T TIGR03576 162 KQAKSKEAIVLVDDASGARVRRLYGQPPALDLG-----ADLVVTSTDKLMDGPRGGLLAGRKELVDKIKSVGEQFGLE-- 234 (346)
T ss_pred HHHHHcCCEEEEECCccccccccCCCCCHHHcC-----CcEEEeccchhccccceEEEEeCHHHHHHHHHhhcCcccC--
Confidence 999999999999999998876654555443333 378899999999 678999999999999999888888776
Q ss_pred CcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHH
Q 011567 348 LPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWAL 427 (483)
Q Consensus 348 ~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l 427 (483)
.+|..++++.++|+.+.. +...+.++++.+.+.+.++.+ .+... ..+++++.+... + ..+.+.++|
T Consensus 235 ~~~~~~~aa~~aL~~~~~-~~~~~~l~~r~~~~~~~l~~~---~~~~~-~~~f~~~~~~~~------~---~~~~~~~ll 300 (346)
T TIGR03576 235 AQAPLLAAVVRALEEFEL-SRIRDAFKRKEEVYLRLFDKL---NVERT-PTGFVIKGVEEE------K---LIEIGLDLL 300 (346)
T ss_pred ccHHHHHHHHHHHhhccH-HHHHHHHHHHHHHHHHHHHhC---CCCcC-CCeEEEEeCCCC------C---HHHHHHHHH
Confidence 366677888889876543 456788888888888877643 33322 444666666321 0 123455678
Q ss_pred HhCCEEEEeecccccccCCCCCceEEEccCCC-CHHHHHHHHHHHHHHH
Q 011567 428 KEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAH-SEADLVKACESLKRIS 475 (483)
Q Consensus 428 ~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~-t~edi~~~~~~l~~~~ 475 (483)
+++||.+.+..... ..+..+||++.... ++.++++++++|++.+
T Consensus 301 ~~~gV~v~~~~~f~----~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 301 RNYGIITITAVGMP----GASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred HhCCEEEeCCcccC----CCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 88899999754221 01244999986322 2227999999998764
No 107
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=2.5e-32 Score=278.10 Aligned_cols=335 Identities=18% Similarity=0.212 Sum_probs=245.0
Q ss_pred eEEEee-cCCCCCCCCChHHHHHHHHHH-HhcCCCCCCCCCcccChHHHHHHHH----HHHhhhCCCCEEE-ecccHHHH
Q 011567 110 EVVNFA-SANYLGLIGHEKLLESCTSAL-EKYGVGSCGPRGFYGTIDVHLDCEA----RIAKFLGTPDSIL-YSYGLSTM 182 (483)
Q Consensus 110 ~~id~~-s~~~lG~~~~p~i~~a~~~~l-~~~g~g~~~~~~~~g~~~~~~~l~~----~La~~~g~e~~i~-~~sG~~a~ 182 (483)
+.||+. |+||+ +|++++++...+ .+||.|++|+|.+.| .+.+.+||+ ++++++|.+.+++ ++||+.|+
T Consensus 29 ~~~~l~~sen~~----~p~v~~a~~~~~~~~~~~g~~gsr~~~G-~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~ 103 (416)
T PRK13034 29 DHLELIASENFT----SPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEFVDEVEALAIERAKQLFGCDYANVQPHSGSQAN 103 (416)
T ss_pred cCeeecccccCC----CHHHHHHhcchhhcCCCCCCCCCcccCC-ChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHH
Confidence 455554 55885 799999999995 999999999999988 588999999 9999999999966 58999999
Q ss_pred HhhhhhhccCCcEEEEcCCchhH-HHhHhhhc--CCeE--EEecC------CCHHHHHHHHHHhhhhhhhccCccEEEEE
Q 011567 183 FSAIPCFCKKGDLIVADEGVHWG-IQNGLYLS--RSTV--VYFKH------NDMDSLRNTLERVTADNKRAKKLRRYIVV 251 (483)
Q Consensus 183 ~~ai~~~~~~gdiI~~~~~~h~s-~~~g~~~s--~~~v--~~~~~------~d~~~Le~~l~~~~~~~~~~~~~~~~iv~ 251 (483)
..++.+++++||.|+++...|++ +..|+..+ +... ..+++ .|++++++.++.. ++++|++
T Consensus 104 ~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---------~~klVi~ 174 (416)
T PRK13034 104 GAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEH---------KPKLIIA 174 (416)
T ss_pred HHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhc---------CCeEEEE
Confidence 99999999999999999999988 55566543 2222 35555 6899999887542 1467777
Q ss_pred -ecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccc-cCCCceeeccH
Q 011567 252 -EAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-ATEGGFCTGSA 329 (483)
Q Consensus 252 -e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~l-g~~GG~i~~~~ 329 (483)
++++ |...|+++|.++|++||++||+|++|++|.++. | . +.+. ...+|++++|++|++ |+.||++++++
T Consensus 175 ~~~~~---g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~-g--~--~~~~-~~~~Di~~~s~~K~l~g~~GG~v~~~~ 245 (416)
T PRK13034 175 GFSAY---PRELDFARFREIADEVGALLMVDMAHIAGLVAA-G--E--HPNP-FPHAHVVTTTTHKTLRGPRGGMILTND 245 (416)
T ss_pred CCCcc---ccccCHHHHHHHHHHcCCEEEEeCcccccCccc-C--C--CCCC-CCCceEEEEeCcccCCCCCCeEEEECc
Confidence 4544 677789999999999999999999999988763 2 2 1221 134799999999999 57789887765
Q ss_pred HHH-HHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCceeecC-CCCCEEEEEec
Q 011567 330 RVV-DHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASN-PESPIVFLILE 406 (483)
Q Consensus 330 ~~~-~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~-~~~~i~~l~l~ 406 (483)
+.+ +.++........+...+|..++++.+.++.+.. .++.++++++++++|++.|.+. |+++..+ .+++++.+.+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~~ 324 (416)
T PRK13034 246 EEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDLR 324 (416)
T ss_pred HHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEcC
Confidence 544 434332111112334556666655566666533 2456899999999999999887 9887642 57899999885
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc-ccCCCCCceEEEccC----CCCHHHHHHHHHHHHHHHH
Q 011567 407 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML-DKCRLPVGIRLFVSA----AHSEADLVKACESLKRISA 476 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~-~~~~~~~~lRi~~~~----~~t~edi~~~~~~l~~~~~ 476 (483)
+... . ...+.+ .|++.||++.....|.. .....+.+||+++++ .+|++|+++++++|++++.
T Consensus 325 ~~~~----~---~~~~~~-~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 325 PKGL----S---GKDAEQ-ALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred CCCC----C---HHHHHH-HHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 4321 1 112333 46667999986332221 000124579999888 8899999999999998876
No 108
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=100.00 E-value=6e-32 Score=272.35 Aligned_cols=328 Identities=16% Similarity=0.138 Sum_probs=241.9
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCcccCh-----HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcC
Q 011567 126 EKLLESCTSALEKYGVGSCGPRGFYGTI-----DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADE 200 (483)
Q Consensus 126 p~i~~a~~~~l~~~g~g~~~~~~~~g~~-----~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~ 200 (483)
-.+.+++.+++++||.|++++|...|+. +...++++.+|+++|.+.++++++|++++..++.++.++||.|+++.
T Consensus 18 g~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~ 97 (370)
T TIGR02539 18 GVLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCKEGDWVVLDG 97 (370)
T ss_pred CCCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhCCCCEEEECC
Confidence 4688999999999999998888766655 35667888899999999999999999999999999999999999999
Q ss_pred CchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHH
Q 011567 201 GVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEK 273 (483)
Q Consensus 201 ~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k 273 (483)
..|+++..+++..|.+++.++++ |+++|++.+++.... ....+++|+++++++++|.+.|+++|.++|++
T Consensus 98 ~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~---~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~ 174 (370)
T TIGR02539 98 LAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDE---SGKPPVLALLTHVDGEYGNLPDAGKVAKVCRE 174 (370)
T ss_pred cccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhc---cCCCcEEEEEECCCCCCccccCHHHHHHHHHH
Confidence 99999999999999999999986 899999888653211 00136788888899999999999999999999
Q ss_pred cCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC--ceeeccHHHHHHHHhcCCceeecC-----
Q 011567 274 YRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG--GFCTGSARVVDHQRLSSSGYVFSA----- 346 (483)
Q Consensus 274 ~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G--G~i~~~~~~~~~~~~~~~~~~fs~----- 346 (483)
||+++|+||+|+.|.++..+.. .++|++++|++|++++.| ||+++++++++.++....+|.++.
T Consensus 175 ~~~~livDea~~~g~~~~~~~~---------~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~ 245 (370)
T TIGR02539 175 KGVPLLLNCAYTVGRMPVSAKE---------IGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLG 245 (370)
T ss_pred cCCeEEEECccccCCcCCCHHH---------cCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCccceeeeec
Confidence 9999999999998765432211 235899999999998766 999999999998877665554422
Q ss_pred -CCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHH
Q 011567 347 -SLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIA 423 (483)
Q Consensus 347 -~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~--~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~ 423 (483)
+.++..++++.++++...+.-+...+..++.+++++.|+++ |+++. .+..++++.+.++........+......+.
T Consensus 246 ~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~ 324 (370)
T TIGR02539 246 CTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLY 324 (370)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhHHhhhhccccHHHH
Confidence 11122344445566543322122344455567899999987 88763 245688888776321000001111234566
Q ss_pred HHHHHhCCEE-EEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 424 DWALKEDGVF-VVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 424 ~~~l~~~Gv~-v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
+.+ .++||+ +++. . +..||+++. .+|++|+++++++|++++++
T Consensus 325 ~~L-~e~GI~~ir~~----~-----~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 325 EEL-KKRGIHGIRSG----Q-----TKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred HHH-HhCCCccccCC----c-----ceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 654 456997 4421 1 234999984 68999999999999988764
No 109
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=1.9e-32 Score=271.56 Aligned_cols=288 Identities=24% Similarity=0.338 Sum_probs=218.1
Q ss_pred ccccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh--C
Q 011567 95 VLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL--G 168 (483)
Q Consensus 95 ~i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~--g 168 (483)
+|++++|.|+| .||++|+||+++ ..+|| +||++.+++.+++.+....+ . ...+++...+|.++|++.+ +
T Consensus 1 ~i~~a~G~~l~d~dG~~~lD~~~~~~~~~lGh-~~p~i~~ai~~~~~~~~~~~-~---~~~~~~~~~~la~~L~~~~p~~ 75 (339)
T PF00202_consen 1 FIERAEGAYLWDVDGREYLDFMSGYGSVNLGH-NHPEIAEAIAEQANKLNYVS-F---SGFTHPEAAELAEKLAELFPGG 75 (339)
T ss_dssp EEEEEEBTEEEETTSEEEEESSHHHHTTTT-B-T-HHHHHHHHHHHHHCSSCS-T---TTSEEHHHHHHHHHHHHHSSTT
T ss_pred CeEEeecCEEEECCCCEEEECCCCccceecCC-CccccchhHHHHhhhccccc-c---cceeccchhhhhhhhhhccccc
Confidence 47899999999 899999999986 78999 89999999999999854322 1 1224678899999999999 4
Q ss_pred CCCEEEecccHHHHHhhhhhh---------ccCCcEEEEcCCchhHHHhHhhhcC------------CeEEEecCCCHHH
Q 011567 169 TPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSR------------STVVYFKHNDMDS 227 (483)
Q Consensus 169 ~e~~i~~~sG~~a~~~ai~~~---------~~~gdiI~~~~~~h~s~~~g~~~s~------------~~v~~~~~~d~~~ 227 (483)
.+.+.+.+||++|++.|++.. ++|..+|.+...||+.+...+.+++ ..+..++++|...
T Consensus 76 ~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 155 (339)
T PF00202_consen 76 LDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAA 155 (339)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHH
T ss_pred cceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccch
Confidence 566777799999999997543 4788899999999998776666543 2345677777665
Q ss_pred ----------HHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCccccccccCCC
Q 011567 228 ----------LRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSG 293 (483)
Q Consensus 228 ----------Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~s~g~lg~~G 293 (483)
+++.+.+... ..+++|++||+++.+|.+.| |++|+++|+|||+++|+||++++ +|++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~------~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG--~gRtG 227 (339)
T PF00202_consen 156 DEEEQACLNALEELIAALNA------DEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTG--FGRTG 227 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHG------GGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTT--TTTTS
T ss_pred hhhHHHHHHHHHHHHHhhcC------CcEEEEEEeccccccCccccccchhhehcccccccccceeccccccc--ccccC
Confidence 3333333222 25899999999999887765 89999999999999999999986 56777
Q ss_pred Ccc-ccccCCCCCceeEEEccccccccCCCc----eeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcH
Q 011567 294 RGL-TEHCGVPVDKIDIVTAAMGHALATEGG----FCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPD 368 (483)
Q Consensus 294 ~g~-~~~~~v~~~~~Di~~~s~~K~lg~~GG----~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~ 368 (483)
.++ .+++++.| ||+ +++|+++ || .+++++++++.+....++.+|+ .+|+.|+++.++|+.+++.+
T Consensus 228 ~~~a~~~~gv~P---Div--~~gK~l~--gG~p~sav~~~~~i~~~~~~~~~~~T~~--g~p~~~aaa~~~l~~~~~~~- 297 (339)
T PF00202_consen 228 KFFASEHYGVDP---DIV--TFGKGLG--GGLPISAVLGSEEIMEAFQPGSHGSTFG--GNPLSCAAALATLEILEEED- 297 (339)
T ss_dssp SSSGHHHHTSSS---SEE--EEEGGGG--TTSSEEEEEEEHHHHTTSCTTSSTCTTT--T-HHHHHHHHHHHHHHHHTT-
T ss_pred CccceecccccC---ccc--ccccchh--hhhhcccccccchhhccccccccccccc--cchHhhhhhhhHHHhhccHH-
Confidence 655 48899998 898 6899997 44 4678899998876655555554 58999999999999998854
Q ss_pred HHHHHHHHHHHHHHhhccCC---CceeecCCCCCEEEEEe
Q 011567 369 LITKLKKNTAILRTGLSDIH---GLSIASNPESPIVFLIL 405 (483)
Q Consensus 369 ~~~~l~~~~~~l~~~L~~~~---~~~i~~~~~~~i~~l~l 405 (483)
+.+++++..++|++.|+++. ++.......+.++.+.+
T Consensus 298 ~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~~ie~ 337 (339)
T PF00202_consen 298 LLERVRELGERLREGLRELAARYPLIGEVRGIGLMIGIEL 337 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeCeEEEEEE
Confidence 88999999999999987652 22111123466666655
No 110
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.97 E-value=5e-29 Score=255.95 Aligned_cols=336 Identities=17% Similarity=0.179 Sum_probs=248.2
Q ss_pred eEEEeecC-CCCCCCCChHHHHHHHHHH-HhcCCCCCCCCCcccChHHHHHHHH----HHHhhhCCC-CEEEe----ccc
Q 011567 110 EVVNFASA-NYLGLIGHEKLLESCTSAL-EKYGVGSCGPRGFYGTIDVHLDCEA----RIAKFLGTP-DSILY----SYG 178 (483)
Q Consensus 110 ~~id~~s~-~~lG~~~~p~i~~a~~~~l-~~~g~g~~~~~~~~g~~~~~~~l~~----~La~~~g~e-~~i~~----~sG 178 (483)
+.|++..+ |+ ..|.+.++....+ .+|+.|++|.|.+.|+. .+.++|+ +..+.|+.+ ..+.+ +||
T Consensus 35 ~~l~liasen~----~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~-~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG 109 (475)
T PLN03226 35 KGLELIASENF----TSRAVMEALGSCLTNKYSEGLPGARYYGGNE-YIDQIETLCQKRALEAFRLDPEKWGVNVQPLSG 109 (475)
T ss_pred cCeeEecCCcc----CCHHHHHHHhhHHhccccCCCCCCcCcCCCh-hHHHHHHHHHHHHHHHhCCCcceeEEecCcCch
Confidence 56777655 66 5689999999999 88999999999888876 7788876 344455544 45545 899
Q ss_pred HHHHHhhhhhhccCCcEEEEcC------CchhHHHhHhhhcCCeEE----EecCC------CHHHHHHHHHHhhhhhhhc
Q 011567 179 LSTMFSAIPCFCKKGDLIVADE------GVHWGIQNGLYLSRSTVV----YFKHN------DMDSLRNTLERVTADNKRA 242 (483)
Q Consensus 179 ~~a~~~ai~~~~~~gdiI~~~~------~~h~s~~~g~~~s~~~v~----~~~~~------d~~~Le~~l~~~~~~~~~~ 242 (483)
+.||.+++.+++++||.|+.++ ..|.+...+.++++.... .|+|| |+++|++.+.+..
T Consensus 110 ~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~------ 183 (475)
T PLN03226 110 SPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFR------ 183 (475)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcC------
Confidence 9999999999999999999854 566677777777766544 67788 9999999886532
Q ss_pred cCccEEEEE-ecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccc-cC
Q 011567 243 KKLRRYIVV-EAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-AT 320 (483)
Q Consensus 243 ~~~~~~iv~-e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~l-g~ 320 (483)
+++|++ +++| |...|+++|+++|++||++|++|++|+.|+++..+.. ..+ +.+|++++|++|+| |+
T Consensus 184 ---pklIv~~~S~~---s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~--~p~----~~~Div~~t~hK~L~GP 251 (475)
T PLN03226 184 ---PKLIIAGASAY---PRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAA--SPF----EYCDVVTTTTHKSLRGP 251 (475)
T ss_pred ---CeEEEEecCcC---CCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCC--CCC----CCCeEEEecCcccccCC
Confidence 344554 6555 5666789999999999999999999999988764322 112 35799999999999 78
Q ss_pred CCceeeccHHHH-----------HH--HHhcCCceeecCCCcHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhc
Q 011567 321 EGGFCTGSARVV-----------DH--QRLSSSGYVFSASLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLS 385 (483)
Q Consensus 321 ~GG~i~~~~~~~-----------~~--~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~ 385 (483)
.||+++++++.. +. .........|++++++..+++..++++.+.+. ++..+++.+++++|++.|.
T Consensus 252 ~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~ 331 (475)
T PLN03226 252 RGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLM 331 (475)
T ss_pred CceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHH
Confidence 899998887544 33 22323334567777788888888899988643 4578999999999999998
Q ss_pred cCCCceeecC-CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEE----EccCCCC
Q 011567 386 DIHGLSIASN-PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRL----FVSAAHS 460 (483)
Q Consensus 386 ~~~~~~i~~~-~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi----~~~~~~t 460 (483)
+ .|+++.+. .+++++.+.+... +. +. .++ ...|++.||.+.....|.......|++||+ ..+..++
T Consensus 332 ~-~G~~l~~~~t~~hi~lv~~~~~-gi---~~---~~~-~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~ 402 (475)
T PLN03226 332 S-KGYKLVTGGTDNHLVLWDLRPL-GL---TG---SRV-EKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLV 402 (475)
T ss_pred h-CCCEEEcCCCCCCEEEEEccCC-CC---CH---HHH-HHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCC
Confidence 8 49998753 3467777776332 11 11 123 335677799987654332211123678998 6778899
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011567 461 EADLVKACESLKRISAV 477 (483)
Q Consensus 461 ~edi~~~~~~l~~~~~~ 477 (483)
++|++++++.|.++++.
T Consensus 403 ~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 403 EKDFEKVAEFLHRAVTI 419 (475)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999874
No 111
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.97 E-value=1.1e-28 Score=249.90 Aligned_cols=346 Identities=14% Similarity=0.140 Sum_probs=242.3
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCC-CCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhh
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVG-SCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPC 188 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g-~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~ 188 (483)
++||+---.-+|. ..+.+.+|+.+....++.. ++..+...+..+.+.++++.+|+++|.++++++++|++++..++.+
T Consensus 19 ~~~~~~~~~~~~p-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~ 97 (387)
T PRK09331 19 EFINLDPIQRGGI-LTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHS 97 (387)
T ss_pred cccccChhhcCCC-CCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHH
Confidence 4444433334555 4566777766665443221 1122444555678999999999999999999999999999999999
Q ss_pred hccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC-------CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCc
Q 011567 189 FCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQI 261 (483)
Q Consensus 189 ~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~-------~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i 261 (483)
++++||.|+++...|++...++...|.+++.+++ .|++++++.+++.... ....+++|+++++++++|.+
T Consensus 98 l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~---~~~~~~lV~l~~~~~~tG~~ 174 (387)
T PRK09331 98 LCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEE---TGKPPALALLTHVDGNYGNL 174 (387)
T ss_pred hcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhc---cCCCCEEEEEECCCCCCccc
Confidence 9999999999999999999999999999988876 3688898888653110 01136788889999999999
Q ss_pred cChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCC--CceeeccHHHHHHHHhcC
Q 011567 262 APLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATE--GGFCTGSARVVDHQRLSS 339 (483)
Q Consensus 262 ~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~--GG~i~~~~~~~~~~~~~~ 339 (483)
.|+++|.++|++||+++|+|++|+.|.++..+. . .++|++++|++|++++. +||+++++++++.++...
T Consensus 175 ~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~----~-----~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~~~ 245 (387)
T PRK09331 175 ADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGK----K-----LGADFIVGSGHKSMAASAPSGVLATTEEYADKVFRTS 245 (387)
T ss_pred ccHHHHHHHHHHcCCEEEEECCcccCCcCCCHH----H-----cCCCEEEeeCcccccCCCCEEEEEECHHHHhhccccc
Confidence 999999999999999999999999876543221 1 23489999999999743 389999999888765543
Q ss_pred Ccee------ecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecC--CCCCEEEEEecCCCCC
Q 011567 340 SGYV------FSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASN--PESPIVFLILEKSTGS 411 (483)
Q Consensus 340 ~~~~------fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~--~~~~i~~l~l~~~~~~ 411 (483)
.+|. |+++.++..++++.++++.+.+..+.+++..++.+++++.|++++|+++... ..++++.+..+.....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~ 325 (387)
T PRK09331 246 RKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEI 325 (387)
T ss_pred CCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHH
Confidence 3331 3434444445555667766554444667778889999999999889988742 2456666654310000
Q ss_pred chhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 412 MKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 412 ~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
..........+.+.+ +++||...+... ..+|...+..+|++|+++++++|++++++.
T Consensus 326 ~~~~~~~~~~~~~~L-~~~gI~~~~~~~---------~~i~ri~~~g~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 326 AKKHKRRGFFLYEEL-KKRGIHGIKPGA---------TKEFKLSTYGLTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred hhhccccchhHHHHH-HHcCceEEccCC---------ceEEEEEeccCCHHHHHHHHHHHHHHHHhc
Confidence 000111123566654 456997432211 224444555689999999999999987764
No 112
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.97 E-value=1.4e-28 Score=247.92 Aligned_cols=341 Identities=16% Similarity=0.202 Sum_probs=244.7
Q ss_pred eeEEEeecC-CCCCCCCChHHHHHHHHHHH-hcCCCCCCCCCcccCh--H-HHHHHHHHHHhhhCCCCEEEe-cccHHHH
Q 011567 109 KEVVNFASA-NYLGLIGHEKLLESCTSALE-KYGVGSCGPRGFYGTI--D-VHLDCEARIAKFLGTPDSILY-SYGLSTM 182 (483)
Q Consensus 109 ~~~id~~s~-~~lG~~~~p~i~~a~~~~l~-~~g~g~~~~~~~~g~~--~-~~~~l~~~La~~~g~e~~i~~-~sG~~a~ 182 (483)
++.|++..+ |+ ..|.+.++....+. +|..|..|.|.+.|+. | +..-..++..++||.+.+-+- -||+.||
T Consensus 49 ~~~l~LiasEN~----~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~An 124 (493)
T PRK13580 49 RSSLKLIASENY----SSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHAYVQPHSGADAN 124 (493)
T ss_pred hcCceEeccccc----CCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcccccCCCcHHHH
Confidence 356777665 66 55788888777665 5888888888655553 2 223344566677898876544 8999999
Q ss_pred HhhhhhhccC-------------------------------CcEEEEcCCchhH---HHhHhhhcC--CeEEEecC----
Q 011567 183 FSAIPCFCKK-------------------------------GDLIVADEGVHWG---IQNGLYLSR--STVVYFKH---- 222 (483)
Q Consensus 183 ~~ai~~~~~~-------------------------------gdiI~~~~~~h~s---~~~g~~~s~--~~v~~~~~---- 222 (483)
..+..++.++ ||.|+.-...|+. .......++ ...+.++.
T Consensus 125 ~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~ 204 (493)
T PRK13580 125 LVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDT 204 (493)
T ss_pred HHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCccc
Confidence 9999998876 7887765444322 111112222 22333322
Q ss_pred --CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCcccccc
Q 011567 223 --NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHC 300 (483)
Q Consensus 223 --~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~ 300 (483)
-|++++++.+.+. +..|++.+..+. |...|+++|+++|++||+++++|++|+.|++| |.+..+++
T Consensus 205 g~iD~d~l~~~~~~~----------~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Glig--g~~~~~~~ 271 (493)
T PRK13580 205 GLLDYDEIAALAREF----------KPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVA--GKVFTGDE 271 (493)
T ss_pred CccCHHHHHHHHhhc----------CCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceec--cccchhhc
Confidence 2778888877652 345555566655 55789999999999999999999999999987 34433333
Q ss_pred CCCCCceeEEEccccccc-cCCCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHH
Q 011567 301 GVPVDKIDIVTAAMGHAL-ATEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTA 378 (483)
Q Consensus 301 ~v~~~~~Di~~~s~~K~l-g~~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~ 378 (483)
+.. ..+|++++|++|+| |+.||++++++++.+.+. .+.++.|+++++|..++++.+..+.... .++.++++.+|++
T Consensus 272 ~~~-~~~D~vtgT~hKaL~GP~GG~I~~~~~l~~~L~-~a~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~ 349 (493)
T PRK13580 272 DPV-PHADIVTTTTHKTLRGPRGGLVLAKKEYADAVD-KGCPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNAR 349 (493)
T ss_pred CCC-CCCcEEEeCChhhccCCCeEEEEecHHHHHHHh-hCCCcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHH
Confidence 322 46799999999999 788999999999999885 4458999999889777777654444332 2458999999999
Q ss_pred HHHHhhccCCCceeec-CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCC-CCCceEEEcc
Q 011567 379 ILRTGLSDIHGLSIAS-NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCR-LPVGIRLFVS 456 (483)
Q Consensus 379 ~l~~~L~~~~~~~i~~-~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~-~~~~lRi~~~ 456 (483)
+|++.|.+. |+++.. ..+++++.+.+.+. ....+.+.+.|++.||++....+|.++... .+.+|||+++
T Consensus 350 ~La~~L~~~-G~~vv~ggTdshIV~V~lg~~--------~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~ 420 (493)
T PRK13580 350 ALAEGFLKR-GARLVTGGTDNHLVLIDVTSF--------GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTP 420 (493)
T ss_pred HHHHHHHhc-CCCccCCCCCCCEEEEEeCCH--------HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccc
Confidence 999999986 988753 35789999998431 222333444566779999999888876542 2467999998
Q ss_pred C----CCCHHHHHHHHHHHHHHHHH
Q 011567 457 A----AHSEADLVKACESLKRISAV 477 (483)
Q Consensus 457 ~----~~t~edi~~~~~~l~~~~~~ 477 (483)
+ .++++|++++++.|.++++.
T Consensus 421 A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 421 ALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred hhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 8 66899999999999988864
No 113
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.96 E-value=1.6e-28 Score=247.21 Aligned_cols=335 Identities=22% Similarity=0.298 Sum_probs=243.9
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC-------CCC-EEEecccHHH
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG-------TPD-SILYSYGLST 181 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g-------~e~-~i~~~sG~~a 181 (483)
++|||+++++.+...+|.+.+++.+..+ +.........|+....+.+|++.+|++++ ..+ .+++++|+.+
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~ 79 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIR--GAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQA 79 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHH--HHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHH--HhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEeccccc
Confidence 5899999988777667666666665554 11112223356666778999999999998 234 7888888766
Q ss_pred HH-hhhhhh-ccCCcEEEEcCCchhHHHhHhhhcCCeEEEec-------CCCHHHHHHHHHHhhhhhhhccCccEEEEEe
Q 011567 182 MF-SAIPCF-CKKGDLIVADEGVHWGIQNGLYLSRSTVVYFK-------HNDMDSLRNTLERVTADNKRAKKLRRYIVVE 252 (483)
Q Consensus 182 ~~-~ai~~~-~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~-------~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e 252 (483)
.. .+...+ .+++|.|+++.++|..+...++..|.+++.++ +.|+++|++.+++...+. .++++|++.
T Consensus 80 ~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~----~~~~~v~~~ 155 (363)
T PF00155_consen 80 ALFLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKG----PRPKAVLIC 155 (363)
T ss_dssp HHHHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTT----ETEEEEEEE
T ss_pred chhhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccc----cccceeeec
Confidence 55 445666 57999999999999999999999999999888 669999999998754331 025788888
Q ss_pred cccCCCCCccCh---HHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceee
Q 011567 253 AVYQNSGQIAPL---DELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCT 326 (483)
Q Consensus 253 ~v~~~~G~i~~L---~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~ 326 (483)
++++++|...+. ++|+++|++||+++|+||+|+.+..+..+.+.. ...+......+++.|+||++|..| ||++
T Consensus 156 ~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~ 234 (363)
T PF00155_consen 156 NPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPI-RSLLDEDDNVIVVGSLSKSFGLPGLRVGYIV 234 (363)
T ss_dssp SSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHH-HGHHTTTSTEEEEEESTTTTTSGGGTEEEEE
T ss_pred ccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcc-cccccccccceeeeecccccccccccccccc
Confidence 999999999985 555555999999999999999887775422211 122221222688999999999888 9999
Q ss_pred ccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEE
Q 011567 327 GSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE----ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVF 402 (483)
Q Consensus 327 ~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~----~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~ 402 (483)
+++++++.++.....+.. +.....++.+.+.... ...+.+++++++.+++.+.|++. ++.+..+..+.+++
T Consensus 235 ~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~ 309 (363)
T PF00155_consen 235 APPELIERLRRFQRSGLS----SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPEAGFFLW 309 (363)
T ss_dssp EEHHHHHHHHHHHHHTTS----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHSBSSEEE
T ss_pred chhhhhhhhhhccccccc----cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeeccCccEEE
Confidence 999999988765444333 3333433333433222 33568889999999999999887 88888665666666
Q ss_pred EEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHH
Q 011567 403 LILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESL 471 (483)
Q Consensus 403 l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l 471 (483)
+.+.. ....++.+.++++.||.+.++.++.. +..+|+++ +.++++++++++++|
T Consensus 310 ~~~~~---------~~~~~l~~~L~~~~gi~v~pg~~~~~-----~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 310 VRLDP---------NDAEELAQELLEEYGILVRPGSYFGV-----PGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp EEESH---------HHHHHHHHHHHHHHTEEEEEGGGGTS-----TTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred EEccc---------chHHHHHHHHHHhCCEEEEecCCCCC-----CCEEEEEe-ccCCHHHHHHHHhhC
Confidence 66631 13456788777766999999877654 45699999 889999999999875
No 114
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.96 E-value=3.8e-28 Score=221.33 Aligned_cols=362 Identities=15% Similarity=0.152 Sum_probs=265.0
Q ss_pred cCCCccccCCCCeEE-ECCeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh-
Q 011567 91 CEPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL- 167 (483)
Q Consensus 91 ~~~~~i~~~~g~~~~-~~G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~- 167 (483)
..|..|.+++|.|++ .+|.+|||..++ ...|| .||++.+|..+++... +|..|.. ++-..+.++.|..-+
T Consensus 28 sDP~kivRaq~QYmfDE~g~~yLDCInNVaHvgh-chp~VV~A~~kQmat~---~tN~RFl---hd~lv~cA~~l~stlP 100 (452)
T KOG1403|consen 28 SDPLKIVRAQGQYMFDEEGTRYLDCINNVAHVGH-CHPEVVRAGAKQMATI---STNNRFL---HDELVQCARTLTSTLP 100 (452)
T ss_pred CCchhhehhccceeeccCcccHHHHhhhhhhccc-CCHHHHHHHHHHHhHh---cccchhh---HHHHHHHHHHHhhcCC
Confidence 347779999999999 799999999998 67788 8999999999998764 4444432 343444555555444
Q ss_pred CCCCEEEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcCC---------e--EEEe-c-----------
Q 011567 168 GTPDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRS---------T--VVYF-K----------- 221 (483)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~~---------~--v~~~-~----------- 221 (483)
+..-+++++||++||..|++ .|++..|.|..|..||+.+..-+.+|-- + .+.+ |
T Consensus 101 eLsvc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~ 180 (452)
T KOG1403|consen 101 ELSVCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRD 180 (452)
T ss_pred CceEEEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCcccccccccc
Confidence 45566777999999999975 5889999999999999887765554421 1 1110 1
Q ss_pred -CC---C-----HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hHHHHHHHHHcCcEEEEeCcc-ccc
Q 011567 222 -HN---D-----MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESN-SFG 287 (483)
Q Consensus 222 -~~---d-----~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~~l~~l~~k~~~~li~DEa~-s~g 287 (483)
++ | .++++++++.... +...+++++.|..++-+|.+.| .+++.+..+.+|-+.|.||++ +||
T Consensus 181 ~~~~~a~~~~~Yad~vk~I~~d~~~----~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFG 256 (452)
T KOG1403|consen 181 KMYPDADMGALYADPVKEICQDQLA----KGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFG 256 (452)
T ss_pred ccCCcccchhhhhhHHHHHHHHHHh----cCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhccc
Confidence 11 2 2345566654432 2335788999999999999887 799999999999999999998 566
Q ss_pred cccCCCCccccccCCCCCceeEEEcccccccc--CCCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc
Q 011567 288 VLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA--TEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE 365 (483)
Q Consensus 288 ~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg--~~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~ 365 (483)
+.|+ .-|..+.++.-| ||+ +|+|.+| -+-+.++.++++.+.+...+..|.-+.+.||.+||++++.++.+++
T Consensus 257 RvG~-hyWafq~y~fiP---DIV--tmgKpmGNGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~ 330 (452)
T KOG1403|consen 257 RVGS-HYWAFQTYNFIP---DIV--TMGKPMGNGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCED 330 (452)
T ss_pred ccch-hhhhhhhhcccc---chh--eecccCCCCCeeeEEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHHhh
Confidence 6654 234456778777 888 8999998 2225578899999999877777755556799999999999999886
Q ss_pred CcHHHHHHHHHHHHHHHhhccCC-CceeecCCC--CCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc
Q 011567 366 NPDLITKLKKNTAILRTGLSDIH-GLSIASNPE--SPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML 442 (483)
Q Consensus 366 ~~~~~~~l~~~~~~l~~~L~~~~-~~~i~~~~~--~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~ 442 (483)
+ +++++.++.+++|...|.++. ..++.++.+ +.++.+.+-.+......+...+..++.++-+.++|++.....-
T Consensus 331 E-~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGPh-- 407 (452)
T KOG1403|consen 331 E-NLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGPH-- 407 (452)
T ss_pred h-hHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCCC--
Confidence 5 589999999998888886652 455555433 4566666644433334455566677777666678998754210
Q ss_pred ccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 443 DKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 443 ~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
..-|+|-|+...++++.++++..|++++.-
T Consensus 408 -----~NilKiKPPmCFneena~e~v~~ld~iLT~ 437 (452)
T KOG1403|consen 408 -----RNILKIKPPMCFNEENADEFVLGLDEILTV 437 (452)
T ss_pred -----CceeecCCCcccChhhHHHHHHHHHHHHHH
Confidence 123899999999999999999999998863
No 115
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.96 E-value=2.7e-26 Score=230.81 Aligned_cols=329 Identities=15% Similarity=0.152 Sum_probs=225.9
Q ss_pred ChHHHHHHHHHHHhcCCCCCCCCCcccC-----hHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEc
Q 011567 125 HEKLLESCTSALEKYGVGSCGPRGFYGT-----IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVAD 199 (483)
Q Consensus 125 ~p~i~~a~~~~l~~~g~g~~~~~~~~g~-----~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~ 199 (483)
...+.+++.+++.+||.++++|+...+. .+...++++++++++|.++++++++|++++..++.++.++||.|+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~ 89 (361)
T cd06452 10 GGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCEKGDWVVVD 89 (361)
T ss_pred CCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Confidence 3467788889999999888777653332 25688999999999999888888888899999999999999999999
Q ss_pred CCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHH
Q 011567 200 EGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKE 272 (483)
Q Consensus 200 ~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~ 272 (483)
...|++...++...|.+++.++.+ |++++++.+++...+ ...++++|++.++++++|.+.|+++|.++|+
T Consensus 90 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~---~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~ 166 (361)
T cd06452 90 GLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDE---FGKPPALALLTHVDGNYGNLHDAKKIAKVCH 166 (361)
T ss_pred CCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhc---cCCCceEEEEECCCCCCeeeccHHHHHHHHH
Confidence 999999888888889988877532 678888777543210 0013678888888888999999999999999
Q ss_pred HcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCC--CceeeccHHHHHHHHhcCCce-----e-e
Q 011567 273 KYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATE--GGFCTGSARVVDHQRLSSSGY-----V-F 344 (483)
Q Consensus 273 k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~--GG~i~~~~~~~~~~~~~~~~~-----~-f 344 (483)
+||+++|+||+|++|.+...+ .. .++|++++|++|++++. +||+++++++++.++.....+ . .
T Consensus 167 ~~~~~vivD~a~~~g~~~~~~----~~-----~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~ 237 (361)
T cd06452 167 EYGVPLLLNGAYTVGRMPVSG----KE-----LGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQMFKIKEVELL 237 (361)
T ss_pred HcCCeEEEECCcccCCcCCCH----HH-----cCCCEEEecCCccccCCCCeEEEEECHHHHHHHhccccccccceeeee
Confidence 999999999999876443211 11 23489999999999743 489999999888875543221 1 1
Q ss_pred cCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHH
Q 011567 345 SASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDI 422 (483)
Q Consensus 345 s~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~--~~~~~i~~l~l~~~~~~~~~~~~~~~~i 422 (483)
.++.++..++++.++++.+.+.-+...+..++.+++++.|++++|+.+.+ +...+++.+.................++
T Consensus 238 ~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 317 (361)
T cd06452 238 GCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFL 317 (361)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhH
Confidence 12222223344445555443222234444556689999999988888763 2345677666531000000000112246
Q ss_pred HHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 423 ADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 423 ~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
.+.+++ +||.+.. +.. ...+|++. ..+|++|++.++++|+++.
T Consensus 318 ~~~L~~-~gI~~~~---~~~-----~~~~ri~~-~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 318 YSELKK-RGIHGIK---PGL-----TRYFKLST-YGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred HHHHHH-cCceEEc---CCC-----ceEEEEEe-cCCCHHHHHHHHHHHHHHh
Confidence 676544 5998532 111 12278877 4479999999999998654
No 116
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.95 E-value=1.2e-26 Score=231.32 Aligned_cols=324 Identities=16% Similarity=0.197 Sum_probs=224.4
Q ss_pred EeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccC
Q 011567 113 NFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKK 192 (483)
Q Consensus 113 d~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~ 192 (483)
||+|.|++|. +|.+.+++.+.+.... .|+..+...++++.+++++|.++.+++++|++++..+++++.++
T Consensus 1 ~~~~~~~~~~--~~~v~~a~~~~~~~~~--------~~~~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~~ 70 (338)
T cd06502 1 DFRSDTVTGP--TPEMLEAMAAANVGDD--------VYGEDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQP 70 (338)
T ss_pred CcccccCCCC--CHHHHHHHHhcccCCc--------ccCCCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcCC
Confidence 6899999984 5889998877653221 34556778999999999999777888899999999999999999
Q ss_pred CcEEEEcCCchhHHHhH---hhhcCCeEEEecC----CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCc---c
Q 011567 193 GDLIVADEGVHWGIQNG---LYLSRSTVVYFKH----NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQI---A 262 (483)
Q Consensus 193 gdiI~~~~~~h~s~~~g---~~~s~~~v~~~~~----~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i---~ 262 (483)
||.|+++.++|.++..+ ..+.|.+++.+++ .|.+++++.+++..+ +...++++|+++++.++ |.+ .
T Consensus 71 gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~i~~~~~---~~~~~~~~v~l~~p~n~-g~~~~~~ 146 (338)
T cd06502 71 GGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGENGKLTPEDLEAAIRPRDD---IHFPPPSLVSLENTTEG-GTVYPLD 146 (338)
T ss_pred CCeEEEecCcceeeecCCcHHHHcCceEEeecCCCCcCCHHHHHHHhhccCC---CcCCcceEEEEEeecCC-ccccCHH
Confidence 99999999999876543 3457888887775 367788877754210 01113577777777766 543 3
Q ss_pred ChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCCc-eeeccHHHHHHHHhcCCc
Q 011567 263 PLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGG-FCTGSARVVDHQRLSSSG 341 (483)
Q Consensus 263 ~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~GG-~i~~~~~~~~~~~~~~~~ 341 (483)
++++|+++|++||+++|+||+|..+..+..|.... ... ..+|+++.|++|++|.+|| ++++++++++.++.....
T Consensus 147 ~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~-~~~---~~~d~~~~s~sK~~~~~~g~~~~~~~~~~~~~~~~~~~ 222 (338)
T cd06502 147 ELKAISALAKENGLPLHLDGARLANAAAALGVALK-TYK---SGVDSVSFCLSKGGGAPVGAVVVGNRDFIARARRRRKQ 222 (338)
T ss_pred HHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHH-HHH---hcCCEEEEeccccCCCccceEEECCHHHHHHHHHHHHH
Confidence 47889999999999999999986554332222111 111 2447888999999986655 466888888877654322
Q ss_pred eeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHH
Q 011567 342 YVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLED 421 (483)
Q Consensus 342 ~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~ 421 (483)
+.++.+.+++.++++.++|+.- ...+..+++.++.+++.+.|+++ ++.+. ++.++++.++++.. .....+
T Consensus 223 ~~~~~~~~~~~~~a~~~~L~~~-~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~v~~~~~-------~~~~~~ 292 (338)
T cd06502 223 AGGGMRQSGFLAAAGLAALEND-LWLRRLRHDHEMARRLAEALEEL-GGLES-EVQTNIVLLDPVEA-------NAVFVE 292 (338)
T ss_pred hCCChhhHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhc-CCCcc-cccCCeEEEecCCc-------cHHHHH
Confidence 2222334566666666666531 12346688888899999999886 55443 34678888776321 112223
Q ss_pred HHHHHH--HhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHH
Q 011567 422 IADWAL--KEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 422 i~~~~l--~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
+..++. .++|+.+.+... ..||++++..+|++|++++++++++
T Consensus 293 l~~~l~~~~~~gi~~~~~~~---------~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 293 LSKEAIERRGEGVLFYAWGE---------GGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHHhhhCCEEEEecCC---------CeEEEEeecCCCHHHHHHHHHHHhc
Confidence 333322 145898876432 3399999999999999999999875
No 117
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.95 E-value=2.4e-25 Score=225.72 Aligned_cols=337 Identities=17% Similarity=0.174 Sum_probs=232.6
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC--C--CCEEEecccHHHHHhh
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG--T--PDSILYSYGLSTMFSA 185 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g--~--e~~i~~~sG~~a~~~a 185 (483)
.++||..+.. .+...+.+.+++.+.+.....+ .....|..++...+++.+.+++| . ++.++.++|++++..+
T Consensus 25 ~~i~l~~g~~-~~~~~~~~~~~~~~~~~~~~~~---Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~ 100 (382)
T PRK06108 25 GVLPLWFGES-DLPTPDFIRDAAAAALADGETF---YTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLA 100 (382)
T ss_pred CeEEecCCCC-CCCCCHHHHHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHH
Confidence 5788888733 2434688999988887652111 11123455566666666666656 2 3455557778999999
Q ss_pred hhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC--------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCC
Q 011567 186 IPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN--------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQN 257 (483)
Q Consensus 186 i~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~--------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~ 257 (483)
+.+++++||.|+++.+.|..+...+...|.+++.++.+ |++++++.+.. ++++|++..++++
T Consensus 101 ~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~----------~~~~i~l~~p~NP 170 (382)
T PRK06108 101 AQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITP----------RTRALFINSPNNP 170 (382)
T ss_pred HHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCc----------cceEEEEECCCCC
Confidence 99999999999999999988888888889988887753 45566555432 2566777778889
Q ss_pred CCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCC-CCceeEEEccccccccCCC---ceeeccHH
Q 011567 258 SGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVP-VDKIDIVTAAMGHALATEG---GFCTGSAR 330 (483)
Q Consensus 258 ~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~-~~~~Di~~~s~~K~lg~~G---G~i~~~~~ 330 (483)
+|.+.+ +++|+++|++||+++|+||+|+.+.++. +.......++. +.+..++++|+||.+|..| ||++++++
T Consensus 171 tG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~ 249 (382)
T PRK06108 171 TGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAP-GGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPA 249 (382)
T ss_pred CCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCC-CCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHH
Confidence 998887 7889999999999999999998776642 11111112221 2344688999999998767 99999999
Q ss_pred HHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCC
Q 011567 331 VVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKST 409 (483)
Q Consensus 331 ~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~ 409 (483)
+++.+.... .+. ..+.+++...++.++++...+ .++.+++++++.+.+.+.|++++++.+..+..+.++++.+++..
T Consensus 250 ~~~~~~~~~-~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~ 327 (382)
T PRK06108 250 LGQVLEKLI-EYN-TSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVT 327 (382)
T ss_pred HHHHHHHHH-Hhc-ccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCC
Confidence 888775432 111 123456666666666653211 13567888888999999998877877765444556677774321
Q ss_pred CCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 410 GSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 410 ~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
...++++.+++++||.+.++..... ..+..+|++++. ++++++++++.|+++++
T Consensus 328 --------~~~~~~~~ll~~~gV~v~pg~~f~~---~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 328 --------DSLALAKRLVDEAGLGLAPGTAFGP---GGEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred --------CHHHHHHHHHHhCCEEEeCchhhCC---CCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 1235777777778999987653211 012459999987 89999999999988764
No 118
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=4.8e-25 Score=224.69 Aligned_cols=337 Identities=14% Similarity=0.127 Sum_probs=234.9
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCC--CCCCCcccChHHHHHHHHHHHhhhCCC--CEE-EecccHHHH
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGS--CGPRGFYGTIDVHLDCEARIAKFLGTP--DSI-LYSYGLSTM 182 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~--~~~~~~~g~~~~~~~l~~~La~~~g~e--~~i-~~~sG~~a~ 182 (483)
+.-|+|-++. |. .++.+.+++.+.++.+.... .......-..+...++++.+++++|.+ +.+ +.+++++++
T Consensus 16 ~~iyld~a~~---~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l 91 (398)
T TIGR03392 16 GTVYLDSAAT---AL-KPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESI 91 (398)
T ss_pred CeEEeeCccc---cC-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHH
Confidence 3468887775 44 55788999988886532111 111000011245678999999999963 445 456777888
Q ss_pred Hhhhhhh----ccCCcEEEEcCCchhHHH----hHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEE
Q 011567 183 FSAIPCF----CKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYI 249 (483)
Q Consensus 183 ~~ai~~~----~~~gdiI~~~~~~h~s~~----~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~i 249 (483)
..++.++ .++||.|++....|.+.. ..++..|.+++.++.+ |++++++.+.+ ++++|
T Consensus 92 ~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~----------~t~lv 161 (398)
T TIGR03392 92 NLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTP----------RTRIL 161 (398)
T ss_pred HHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhcc----------CceEE
Confidence 8888877 478999999999987742 3345678888877653 56667666532 26788
Q ss_pred EEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeecc
Q 011567 250 VVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGS 328 (483)
Q Consensus 250 v~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~ 328 (483)
++..+++++|.+.|+++|.++|++||+++++|++|+.|... .++...++|++++|.+|.+|+.| ||++.+
T Consensus 162 ~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~ 232 (398)
T TIGR03392 162 ALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGP---------PDVQALDIDFYAFSGHKLYGPTGIGVLYGK 232 (398)
T ss_pred EEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCC---------CChhhcCCCEEEEecccccCCCceEEEEEc
Confidence 88999999999999999999999999999999999865431 12222346899899999888766 899888
Q ss_pred HHHHHHHHhcCC------------------ceeecC-CCcHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhccC
Q 011567 329 ARVVDHQRLSSS------------------GYVFSA-SLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDI 387 (483)
Q Consensus 329 ~~~~~~~~~~~~------------------~~~fs~-~~~p~~~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~~ 387 (483)
+++++.+..... ++.|.. +.|....+++.++++.+.+. .++.++..++.+++++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l 312 (398)
T TIGR03392 233 TELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQL 312 (398)
T ss_pred HHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC
Confidence 888776542210 112322 34445666677788877543 356788888999999999988
Q ss_pred CCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccc---cCCCCCceEEEccCCCCHHHH
Q 011567 388 HGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLD---KCRLPVGIRLFVSAAHSEADL 464 (483)
Q Consensus 388 ~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~---~~~~~~~lRi~~~~~~t~edi 464 (483)
+++.+...+.++++.+.+... + .+++.+. |.++||.++.+..+... ....+..||++++..+|++|+
T Consensus 313 ~g~~~~~~~~~~i~~~~~~~~------~---~~~l~~~-L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei 382 (398)
T TIGR03392 313 PGFRSFRCPGSSLLAFDFAGV------H---HSDLAAL-LAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDV 382 (398)
T ss_pred CCeEEeCCCCCcEEEEEeCCc------C---HHHHHHH-HHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHH
Confidence 888877655677888776421 1 2245654 55679999876432110 000124599999999999999
Q ss_pred HHHHHHHHHHHHH
Q 011567 465 VKACESLKRISAV 477 (483)
Q Consensus 465 ~~~~~~l~~~~~~ 477 (483)
++++++|++++++
T Consensus 383 ~~l~~~l~~~~~~ 395 (398)
T TIGR03392 383 DALVDAVGAALEL 395 (398)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998765
No 119
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=3.9e-25 Score=225.54 Aligned_cols=337 Identities=13% Similarity=0.133 Sum_probs=235.0
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCC--CCCCCcccChHHHHHHHHHHHhhhCC-C-CEEEe-cccHHHHH
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGS--CGPRGFYGTIDVHLDCEARIAKFLGT-P-DSILY-SYGLSTMF 183 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~--~~~~~~~g~~~~~~~l~~~La~~~g~-e-~~i~~-~sG~~a~~ 183 (483)
.-|+|-++. |. .++.+.+++.+.++.+.... ..........+...++++.+++++|. + +.|++ +++++++.
T Consensus 20 ~~yld~a~~---~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~ 95 (401)
T PRK10874 20 GVYLDSAAT---AL-KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESIN 95 (401)
T ss_pred eEEEeCCcc---cC-CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHH
Confidence 457877765 44 55788899988887642111 11000011235678899999999997 3 45554 66678888
Q ss_pred hhhhhhc----cCCcEEEEcCCchhHHH----hHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEE
Q 011567 184 SAIPCFC----KKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIV 250 (483)
Q Consensus 184 ~ai~~~~----~~gdiI~~~~~~h~s~~----~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv 250 (483)
.+++++. ++||.|++....|.+.. ...+..|.+++.++.+ |++++++.+.. ++++|+
T Consensus 96 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~----------~t~lv~ 165 (401)
T PRK10874 96 LVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITP----------RTRILA 165 (401)
T ss_pred HHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCc----------CcEEEE
Confidence 8888873 78999999999987642 3345668888777643 56666665532 267888
Q ss_pred EecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccH
Q 011567 251 VEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSA 329 (483)
Q Consensus 251 ~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~ 329 (483)
+..+.+++|.+.|+++|.++|++||+++++|++|+.|.+. .++...++|++++|++|.+|+.| |+++.++
T Consensus 166 i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~ 236 (401)
T PRK10874 166 LGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFP---------ADVQALDIDFYAFSGHKLYGPTGIGVLYGKS 236 (401)
T ss_pred EeCCcccccCcCCHHHHHHHHHHcCCEEEEECCccccccc---------CCchhcCCCEEEEecccccCCCccEEEEEch
Confidence 8999999999999999999999999999999999865432 12222346999999999888776 8988888
Q ss_pred HHHHHHHhcC------------------CceeecC-CCcHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhccCC
Q 011567 330 RVVDHQRLSS------------------SGYVFSA-SLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIH 388 (483)
Q Consensus 330 ~~~~~~~~~~------------------~~~~fs~-~~~p~~~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~~~ 388 (483)
++++.+.... .++.|.. +.|.....+..++++.+.+. ....++.+++.+++++.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~ 316 (401)
T PRK10874 237 ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLP 316 (401)
T ss_pred HHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8877653211 1123322 34445666666778776543 3467788888999999999888
Q ss_pred CceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccc---cCCCCCceEEEccCCCCHHHHH
Q 011567 389 GLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLD---KCRLPVGIRLFVSAAHSEADLV 465 (483)
Q Consensus 389 ~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~---~~~~~~~lRi~~~~~~t~edi~ 465 (483)
|+.+...+.++++.+.+... + ..++.+. |.++||.++.+..+..+ .......||++++..+|++|++
T Consensus 317 g~~~~~~~~~~i~~~~~~~~------~---~~~~~~~-L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid 386 (401)
T PRK10874 317 GFRSFRCQDSSLLAFDFAGV------H---HSDLVTL-LAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVD 386 (401)
T ss_pred CEEEeCCCCCcEEEEEECCc------C---HHHHHHH-HHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHH
Confidence 98877666777888876421 1 2345654 55679999876543210 0011245999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 011567 466 KACESLKRISAVV 478 (483)
Q Consensus 466 ~~~~~l~~~~~~~ 478 (483)
+++++|+++++.+
T Consensus 387 ~ll~al~~~~~~~ 399 (401)
T PRK10874 387 ALVNAVDRALELL 399 (401)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987753
No 120
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=5.7e-25 Score=221.37 Aligned_cols=339 Identities=19% Similarity=0.232 Sum_probs=246.3
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC----CC-EEEecccHHHHH
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT----PD-SILYSYGLSTMF 183 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~----e~-~i~~~sG~~a~~ 183 (483)
+++||++.+++ .+..++.+.+++.+++...+.+.. ...|...+.+.+.+.+.+..|. ++ .++++++.+|+.
T Consensus 28 ~~vi~l~iG~P-d~~~p~~i~~a~~~a~~~~~~~Y~---~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~ 103 (393)
T COG0436 28 EDVIDLSIGEP-DFPTPEHIIEAAIEALEEGGTHYT---PSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALF 103 (393)
T ss_pred CCEEEeCCCCC-CCCCCHHHHHHHHHHHhcccCCCC---CCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHH
Confidence 46899998866 444668899999999987432111 1345555555555555555552 24 566677779999
Q ss_pred hhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC----C----CHHHHHHHHHHhhhhhhhccCccEEEEEeccc
Q 011567 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH----N----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVY 255 (483)
Q Consensus 184 ~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~----~----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~ 255 (483)
.++.++..+||.|++.++++.++...+.+.|.+++.++. + |.++|++.+.+ ++++|+++.+.
T Consensus 104 ~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~----------ktk~i~ln~P~ 173 (393)
T COG0436 104 LAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP----------KTKAIILNSPN 173 (393)
T ss_pred HHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc----------cceEEEEeCCC
Confidence 999999999999999999999999999999999888763 2 56777766654 37899999999
Q ss_pred CCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCC-CCccccccCCCCCceeEEEccccccccCCC---ceeecc
Q 011567 256 QNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRS-GRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGS 328 (483)
Q Consensus 256 ~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~-G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~ 328 (483)
|+||.+.+ |++|+++|++||+++|.||+|....+... ...+.+..+. .+.-|.+.||||+++..| ||++++
T Consensus 174 NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~--~~~~i~i~s~SK~~~mtGwRvG~~v~~ 251 (393)
T COG0436 174 NPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGA--RDRTITINSFSKTYGMTGWRIGWVVGP 251 (393)
T ss_pred CCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCC--cceEEEEecccccccccccceeEeecC
Confidence 99999988 89999999999999999999987666431 1122222221 245688899999999877 999998
Q ss_pred -HHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc---CcHHHHHHHHHHHHHHHhhccCCCceeec-CCCCCEEEE
Q 011567 329 -ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE---NPDLITKLKKNTAILRTGLSDIHGLSIAS-NPESPIVFL 403 (483)
Q Consensus 329 -~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~---~~~~~~~l~~~~~~l~~~L~~~~~~~i~~-~~~~~i~~l 403 (483)
+++++.+.... .++.. +.+.....++.++|+.-+. ....++..+++++.+.+.|.++.|+.+.. +..++.++.
T Consensus 252 ~~~l~~~~~~~~-~~~~~-~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~ 329 (393)
T COG0436 252 PEELIAALRKLK-SYLTS-CAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFP 329 (393)
T ss_pred hHHHHHHHHHHH-Hhccc-CCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEe
Confidence 77887765222 22222 2355666667777764422 12345778899999999999987888876 336666777
Q ss_pred EecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 404 ILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 404 ~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
.++.. ....+++.++|++.||.+.|+.....+.. ...+|++.. .++++++++++++.+.++.
T Consensus 330 ~i~~~--------~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g--~~~vRis~~--~~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 330 KIPEL--------LDSEEFAKKLLEEAGVAVVPGSGFGEPPG--EGYVRLSLA--TSEETLEEALRRLARFLAE 391 (393)
T ss_pred ecCCC--------CCHHHHHHHHHHhCCEEEecccccCCCCC--CCeEEEEEe--cCHHHHHHHHHHHHHHHHh
Confidence 76532 11346888999999999999876543100 123999886 4559999999999988765
No 121
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.95 E-value=4.1e-25 Score=225.20 Aligned_cols=328 Identities=15% Similarity=0.145 Sum_probs=224.4
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCC-cccChHHHHHHHHHHHhhhCCCC-EEEe-cccHHHHHhh
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRG-FYGTIDVHLDCEARIAKFLGTPD-SILY-SYGLSTMFSA 185 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~-~~g~~~~~~~l~~~La~~~g~e~-~i~~-~sG~~a~~~a 185 (483)
..|+|.++. |. .++.+.+++.+.+..++.++.+... ..+..+.+.++++.+++++|.+. .+++ +++++++..+
T Consensus 18 ~~yl~~~~~---~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~ 93 (397)
T TIGR01976 18 RVFFDNPAG---TQ-IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLL 93 (397)
T ss_pred eEEecCCcc---CC-CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHH
Confidence 357776654 33 5689999999998876443222111 11233567899999999999642 3545 6666776666
Q ss_pred hhhh---ccCCcEEEEcCCchhHHHh----HhhhcCCeEEEecCC------CHHHHHHHHHHhhhhhhhccCccEEEEEe
Q 011567 186 IPCF---CKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKRAKKLRRYIVVE 252 (483)
Q Consensus 186 i~~~---~~~gdiI~~~~~~h~s~~~----g~~~s~~~v~~~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e 252 (483)
+.++ .++||.|++....|.+... .++..|.+++.++.+ |++++++.+.+ .+++|+++
T Consensus 94 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~----------~~~lv~i~ 163 (397)
T TIGR01976 94 SRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSP----------RTRLVAVT 163 (397)
T ss_pred HHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCC----------CceEEEEe
Confidence 5554 5789999999988877643 345678888776543 46666666532 26789999
Q ss_pred cccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCCceeeccHHHH
Q 011567 253 AVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVV 332 (483)
Q Consensus 253 ~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~~~~ 332 (483)
.+++++|.+.|+++|.++|++||+++++||+|+.|.. . .++...++|++++|++|++|+..||++++++++
T Consensus 164 ~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~------~---~~~~~~~~d~~~~s~~K~~g~~~G~l~~~~~~~ 234 (397)
T TIGR01976 164 AASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHG------L---IDVQATGADFLTCSAYKFFGPHMGILWGRPELL 234 (397)
T ss_pred CCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhcccc------C---CCHHHcCCCEEEEechhhcCCceEEEEEcHHHH
Confidence 9999999999999999999999999999999875421 1 122223458999999999998789999998888
Q ss_pred HHHHhcCCcee-------ecC-CCcHHHHHHHHHHHHHHhcC----------------cHHHHHHHHHHHHHHHhhccCC
Q 011567 333 DHQRLSSSGYV-------FSA-SLPPYLASAAITAIDVLEEN----------------PDLITKLKKNTAILRTGLSDIH 388 (483)
Q Consensus 333 ~~~~~~~~~~~-------fs~-~~~p~~~aaa~~al~~l~~~----------------~~~~~~l~~~~~~l~~~L~~~~ 388 (483)
+.+......+. |.. +.+...+++..++++.+.+. +...++..++.+++++.|++++
T Consensus 235 ~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~ 314 (397)
T TIGR01976 235 MNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLP 314 (397)
T ss_pred hhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 77654322222 222 23444555566777766432 2345666778889999998876
Q ss_pred CceeecC----CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccc--------ccccCCCCCceEEEcc
Q 011567 389 GLSIASN----PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRS--------MLDKCRLPVGIRLFVS 456 (483)
Q Consensus 389 ~~~i~~~----~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~--------~~~~~~~~~~lRi~~~ 456 (483)
++.+.++ ..++++.+.+... ...++.++ |+++||.++....+ .++.. ...||++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~-L~~~gI~v~~~~~~~~~~~~~~~~~~~--~~~iRis~~ 382 (397)
T TIGR01976 315 GVTLYGVARLAARVPTVSFTVHGL---------PPQRVVRR-LADQGIDAWAGHFYAVRLLRRLGLNDE--GGVVRVGLA 382 (397)
T ss_pred CEEEeCCCCccCCCceEEEEeCCc---------CHHHHHHH-HHHCCeEEEeCccchHHHHHHhCCCCC--CCeEEEEee
Confidence 6877643 2577887776321 12356665 45679999865221 11100 135999999
Q ss_pred CCCCHHHHHHHHHHH
Q 011567 457 AAHSEADLVKACESL 471 (483)
Q Consensus 457 ~~~t~edi~~~~~~l 471 (483)
..+|++|+++++++|
T Consensus 383 ~~~t~~di~~l~~~l 397 (397)
T TIGR01976 383 HYNTAEEVDRLLEAL 397 (397)
T ss_pred ccCCHHHHHHHHHhC
Confidence 999999999998864
No 122
>PLN02721 threonine aldolase
Probab=99.95 E-value=1.6e-25 Score=224.49 Aligned_cols=331 Identities=18% Similarity=0.254 Sum_probs=222.4
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhh
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF 189 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~ 189 (483)
+++||+++... . ++|.+.+++.+. ..+.. .++..+...+|++.|++++|.+..+++++|++++..++.++
T Consensus 6 ~~~~~~~~~~~-~-~~~~~~~a~~~~--~~~~~------~~~~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~ 75 (353)
T PLN02721 6 RVVDLRSDTVT-K-PTDAMRAAMANA--EVDDD------VLGYDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVH 75 (353)
T ss_pred hhhhhhccccc-C-CCHHHHHHHHhc--cCCCc------ccCCCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHH
Confidence 57889988544 3 568888887653 11111 12234557899999999999998899999999988888888
Q ss_pred cc-CCcEEEEcCCchhHHHh---HhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCC-CC
Q 011567 190 CK-KGDLIVADEGVHWGIQN---GLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQN-SG 259 (483)
Q Consensus 190 ~~-~gdiI~~~~~~h~s~~~---g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~-~G 259 (483)
++ +||.|+++++.|.+..+ .....|.+++.++.+ |++++++.+++.... ...++++|++++++++ +|
T Consensus 76 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~---~~~~~~~v~l~~~~~np~G 152 (353)
T PLN02721 76 CDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDD---HFPTTRLICLENTHANCGG 152 (353)
T ss_pred ccCCCCeEEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCC---CCCcceEEEEeccccccCC
Confidence 87 99999999999977665 245667788777643 778888877643211 1123678888887655 77
Q ss_pred CccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCC-CceeeccHHHHHHH
Q 011567 260 QIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATE-GGFCTGSARVVDHQ 335 (483)
Q Consensus 260 ~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~-GG~i~~~~~~~~~~ 335 (483)
.+.| +++|.++|++||+++|+||+|.++.....+..... . + ..+|.++.|++|++++. |+++++++++++.+
T Consensus 153 ~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~-~-~--~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~~~ 228 (353)
T PLN02721 153 RCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHR-L-V--KAADSVSVCLSKGLGAPVGSVIVGSKSFIRKA 228 (353)
T ss_pred ccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHH-H-h--hhCCEEEEecccccCCceeeEEecCHHHHHhH
Confidence 7776 78999999999999999999876542211111111 1 1 24577788999999854 45677888887765
Q ss_pred HhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCcee-ecCCCCCEEEEEecCCCCCchh
Q 011567 336 RLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSI-ASNPESPIVFLILEKSTGSMKN 414 (483)
Q Consensus 336 ~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i-~~~~~~~i~~l~l~~~~~~~~~ 414 (483)
......+..+....+..++++..+++.. .+..++..++.+++.+.|++++++.+ ...+.++++++++....+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 301 (353)
T PLN02721 229 KRLRKTLGGGMRQVGVLAAAALVALQEN---VPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSR---- 301 (353)
T ss_pred HHHHHhcCCCeehhHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCcc----
Confidence 4322111111111223333344444332 12344556778899999988777754 344567788887743110
Q ss_pred hHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 415 DLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 415 ~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
.....+++.+. ++||.+.+.. +..||++++..++++|+++++++|++++.
T Consensus 302 --~~~~~~~~~L~-~~gi~v~~~~---------~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 302 --ITAEKLCKSLE-EHGVLLMPGN---------SSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred --ccHHHHHHHHH-hCCcEEecCC---------CceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 11335777654 6699998752 24599999989999999999999998765
No 123
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.95 E-value=6e-25 Score=223.66 Aligned_cols=339 Identities=17% Similarity=0.225 Sum_probs=232.7
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----CC----CCEEEecccH
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----PDSILYSYGL 179 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g~----e~~i~~~sG~ 179 (483)
+.+++||..++. .+..++.+.+++.+.+...... |+...-..+|++.|++++ |. ++.+++++++
T Consensus 30 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 101 (393)
T PRK05764 30 GRDVISLGAGEP-DFDTPEHIKEAAIEALDDGKTK-------YTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAK 101 (393)
T ss_pred cCCEEEeCCCCC-CCCCCHHHHHHHHHHHhcCCCC-------cCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcH
Confidence 346899998854 3435688899988888753221 222223456677777665 32 3455667778
Q ss_pred HHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEEe
Q 011567 180 STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVVE 252 (483)
Q Consensus 180 ~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e 252 (483)
+++..++.+++++||.|+++.+.|..+...++..|.+++.++.+ |++++++.++. .+++|++.
T Consensus 102 ~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----------~~~~v~~~ 171 (393)
T PRK05764 102 QALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITP----------KTKALILN 171 (393)
T ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCc----------cceEEEEE
Confidence 99999999999999999999999999888888889998887764 35666665532 25666677
Q ss_pred cccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCC-CCccccccCCCCCceeEEEccccccccCCC---cee
Q 011567 253 AVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRS-GRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFC 325 (483)
Q Consensus 253 ~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~-G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i 325 (483)
.+.+++|.+.+ +++|+++|++||+++|+||+|+...++.. ...+.+. ..+..+.+++++|+||.+|..| ||+
T Consensus 172 ~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~SK~~~~~G~RiG~i 250 (393)
T PRK05764 172 SPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASL-SPELRDRTITVNGFSKAYAMTGWRLGYA 250 (393)
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHc-CCCCcCCEEEEecCcccccCccceeEEE
Confidence 77888999887 78899999999999999999987655321 1122221 1111235789999999998667 999
Q ss_pred eccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEE
Q 011567 326 TGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDV-LEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLI 404 (483)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~-l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~ 404 (483)
++++++++.++.....+ ....+++...++.+.++. ....++.+++++++.+.+++.|++++++.+..+..+.++++.
T Consensus 251 ~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~ 328 (393)
T PRK05764 251 AGPKELIKAMSKLQSHS--TSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPN 328 (393)
T ss_pred ecCHHHHHHHHHHHhhc--ccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceEEEEe
Confidence 99999998876543222 223456666666666641 111134677778888889999988778877654445566666
Q ss_pred ecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 405 LEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 405 l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
+...... ......++...++++.||.+.++..... +..+|+++. ++++++++++++|.+++++
T Consensus 329 ~~~~~~~---~~~~~~~~~~~l~~~~gi~v~~g~~f~~-----~~~vRis~~--~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 329 VSKLLGK---SITDSLEFAEALLEEAGVAVVPGIAFGA-----PGYVRLSYA--TSLEDLEEGLERIERFLES 391 (393)
T ss_pred ccccccc---ccCCHHHHHHHHHHhCCEEEccccccCC-----CCEEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 6432110 0001235677677777999987644322 345999875 5899999999999998764
No 124
>PLN00175 aminotransferase family protein; Provisional
Probab=99.95 E-value=9.2e-25 Score=222.97 Aligned_cols=341 Identities=16% Similarity=0.177 Sum_probs=229.8
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC----C-CEEEecccHHHHH
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT----P-DSILYSYGLSTMF 183 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~----e-~~i~~~sG~~a~~ 183 (483)
..++||..+++ ++...+.+.+++.+.+++ +.. ......|..++...+.+.+.+..|. + +.++.+++++++.
T Consensus 54 ~~~i~l~~G~P-~~~~~~~~~~~~~~~~~~-~~~--~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~ 129 (413)
T PLN00175 54 HGAINLGQGFP-NFDGPDFVKEAAIQAIRD-GKN--QYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIA 129 (413)
T ss_pred CCeEecCCCCC-CCCCCHHHHHHHHHHHhc-CCC--CcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHH
Confidence 46899998855 344567888998888875 211 1111223344444444444444442 2 2444455678999
Q ss_pred hhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCC
Q 011567 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQN 257 (483)
Q Consensus 184 ~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~ 257 (483)
.++.+++++||.|++.++.|..+...++..|.+++.++.. |+++|++.+.. ++++|++.+++|+
T Consensus 130 ~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~----------~~k~i~i~~p~NP 199 (413)
T PLN00175 130 ATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTS----------KTRAILINTPHNP 199 (413)
T ss_pred HHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCc----------CceEEEecCCCCC
Confidence 9999999999999999999998888888899988877542 45666655532 2567788888899
Q ss_pred CCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHH
Q 011567 258 SGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARV 331 (483)
Q Consensus 258 ~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~ 331 (483)
+|.+.+ +++|+++|++|++++|+||+|....++.....+.+..+. .+..|+++||||+++.+| ||+++++++
T Consensus 200 tG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~--~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l 277 (413)
T PLN00175 200 TGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGM--YERTVTMNSLGKTFSLTGWKIGWAIAPPHL 277 (413)
T ss_pred CCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCC--cCcEEEEecchhhccCcchheeeeEeCHHH
Confidence 999987 788999999999999999999876654322222232222 244788999999999777 999999999
Q ss_pred HHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCC
Q 011567 332 VDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTG 410 (483)
Q Consensus 332 ~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~ 410 (483)
++.++.......++. ++....++.++|+..+. .++.++.++++.+.+.+.|++. |+.+..+..+.++++.+... +
T Consensus 278 ~~~l~~~~~~~~~~~--s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~~f~~~~~~~~-~ 353 (413)
T PLN00175 278 TWGVRQAHSFLTFAT--ATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV-GFKVYPSSGTYFVMVDHTPF-G 353 (413)
T ss_pred HHHHHHHHhhccCCC--CHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEecccc-C
Confidence 888765433223333 44444455555542211 1346778888999999999886 77776554555677765321 1
Q ss_pred CchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 411 SMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 411 ~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
. . ...+++..++++.||.+.++.............+||++. .++++++++++.|+++++
T Consensus 354 ~-~----~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~--~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 354 F-E----NDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFC--KDEETLRAAVERMKTKLK 412 (413)
T ss_pred C-C----CHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEc--CCHHHHHHHHHHHHHHHh
Confidence 0 0 123577777777799998875321110011234999997 379999999999998765
No 125
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.95 E-value=2.2e-25 Score=229.91 Aligned_cols=338 Identities=16% Similarity=0.158 Sum_probs=232.7
Q ss_pred eeEEEeecC-CCCCCCCChHHHHHHHHHHH-hcCCCCCCCCCcccChHHHHH----HHHHHHhhhCCCC-EEEe----cc
Q 011567 109 KEVVNFASA-NYLGLIGHEKLLESCTSALE-KYGVGSCGPRGFYGTIDVHLD----CEARIAKFLGTPD-SILY----SY 177 (483)
Q Consensus 109 ~~~id~~s~-~~lG~~~~p~i~~a~~~~l~-~~g~g~~~~~~~~g~~~~~~~----l~~~La~~~g~e~-~i~~----~s 177 (483)
++.||+..+ |+ ..|.++++....+. +|+.|..+++...|+.. ... .++++++++|.+. .+.+ +|
T Consensus 34 ~~~l~l~~sen~----~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~-~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~s 108 (452)
T PTZ00094 34 IEGLELIASENF----TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEV-VDKIENLCQKRALEAFGLDPEEWGVNVQPYS 108 (452)
T ss_pred HcCeeEeccccc----CCHHHHHHhcchhhccccCCCCCccccccchH-HHHHHHHHHHHHHHHhCCCcccceeecCCCc
Confidence 467888766 55 56899999998884 68778888887666543 233 4568999999753 2222 68
Q ss_pred cHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhh-h-------cC--CeEEEecCC-----CHHHHHHHHHHhhhhhhhc
Q 011567 178 GLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY-L-------SR--STVVYFKHN-----DMDSLRNTLERVTADNKRA 242 (483)
Q Consensus 178 G~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~-~-------s~--~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~ 242 (483)
|+++|..++.++.++||.|+++...|++...... + .+ .++..++++ |+++|++.+++..
T Consensus 109 gt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~------ 182 (452)
T PTZ00094 109 GSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFR------ 182 (452)
T ss_pred hHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhC------
Confidence 9999999999999999999999989987654321 1 11 223345554 8999999886432
Q ss_pred cCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccc-cCC
Q 011567 243 KKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-ATE 321 (483)
Q Consensus 243 ~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~l-g~~ 321 (483)
+++|++. .++.|.+.|+++|.++|+++|+++++|++|++|.++..+.. .+...+|++++|.+|+| |+.
T Consensus 183 ---~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~------~~~~~~D~l~~S~hK~l~GP~ 251 (452)
T PTZ00094 183 ---PKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLP------SPFPYADVVTTTTHKSLRGPR 251 (452)
T ss_pred ---CCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCC------CCCCCCcEEEcCCccCCCCCC
Confidence 2344442 24568999999999999999999999999999987632211 11135799999999988 677
Q ss_pred CceeeccHHHHHHHHhcCCcee---ecCCCcHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhccCCCceeecCC
Q 011567 322 GGFCTGSARVVDHQRLSSSGYV---FSASLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASNP 396 (483)
Q Consensus 322 GG~i~~~~~~~~~~~~~~~~~~---fs~~~~p~~~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~ 396 (483)
||+++.++++.+.+........ |.++.++..+++..++++.+... ++..+++.++.++|.+.|.+. |+++..+.
T Consensus 252 Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~ 330 (452)
T PTZ00094 252 SGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GYDLVTGG 330 (452)
T ss_pred ceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCC
Confidence 8888777665443332221222 23366777888888899988542 467899999999999999885 88876432
Q ss_pred -CCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCC----CHHHHHHHHHHH
Q 011567 397 -ESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAH----SEADLVKACESL 471 (483)
Q Consensus 397 -~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~----t~edi~~~~~~l 471 (483)
.+++..+.+.... .+ ...+.. .|++.||.+.....|.......+++||++++..+ +++|++++++.|
T Consensus 331 ~~~~~~~v~~~~~~----~~---~~~~~~-~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l 402 (452)
T PTZ00094 331 TDNHLVLVDLRPFG----IT---GSKMEK-LLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFL 402 (452)
T ss_pred CCCceEeecCCcCC----CC---HHHHHH-HHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHH
Confidence 2445555443221 01 123444 5677799997443222111112467999995555 499999999999
Q ss_pred HHHHHH
Q 011567 472 KRISAV 477 (483)
Q Consensus 472 ~~~~~~ 477 (483)
+++++.
T Consensus 403 ~~~~~~ 408 (452)
T PTZ00094 403 DRAVKL 408 (452)
T ss_pred HHHHHH
Confidence 999875
No 126
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=8.8e-25 Score=220.37 Aligned_cols=324 Identities=18% Similarity=0.184 Sum_probs=229.0
Q ss_pred CCeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEecccH-HHHH
Q 011567 107 SGKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILYSYGL-STMF 183 (483)
Q Consensus 107 ~G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~~sG~-~a~~ 183 (483)
++++++||+++ +++|. +|.+.+++.+.+.... .|+.. ...++++.+|++++.+ +.+++++|+ +++.
T Consensus 30 ~~~~~i~l~~~~~~~~~--~~~~~~a~~~~~~~~~--------~y~~~-~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~ 98 (367)
T PRK02731 30 GIADIIKLASNENPLGP--SPKAIEAIRAAADELH--------RYPDG-SGFELKAALAEKFGVDPERIILGNGSDEILE 98 (367)
T ss_pred CCCceEEecCCCCCCCC--CHHHHHHHHHHHHhhc--------CCCCC-cHHHHHHHHHHHhCcCHHHEEEcCCHHHHHH
Confidence 57789999998 77774 5889999888876531 12211 1368999999999864 456666665 5567
Q ss_pred hhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCC
Q 011567 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSG 259 (483)
Q Consensus 184 ~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G 259 (483)
.++.++.++||.|+++.+.|..+.......|.+++.++.+ |++++++.+.. ++++|++..+++++|
T Consensus 99 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~----------~~~~v~l~~p~nptG 168 (367)
T PRK02731 99 LLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAKDYGHDLDAMLAAVTP----------RTRLVFIANPNNPTG 168 (367)
T ss_pred HHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecccCCCCCHHHHHHHhCC----------CCcEEEEeCCCCCCC
Confidence 7778889999999999998877776677788888887653 56666665531 256777788899999
Q ss_pred CccChHHHHHHHHHc--CcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHH
Q 011567 260 QIAPLDELIRLKEKY--RFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDH 334 (483)
Q Consensus 260 ~i~~L~~l~~l~~k~--~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~ 334 (483)
.+.|++++.++++.+ |+++|+||+|..+..+..........+. .+..++++|++|++|..| ||+++++++++.
T Consensus 169 ~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~ 246 (367)
T PRK02731 169 TYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAK--FPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDA 246 (367)
T ss_pred cCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhh--cCCEEEEeeehHhhcCcccceeeeeCCHHHHHH
Confidence 999999999999875 8999999999765543211111122222 223688899999998777 999999999988
Q ss_pred HHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchh
Q 011567 335 QRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKN 414 (483)
Q Consensus 335 ~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~ 414 (483)
++.....+ + .++....++.+.++.....++..+.++++.+.+.+.|++. |+.+. ++.++++++.+++..
T Consensus 247 l~~~~~~~--~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~i~~~~~~----- 315 (367)
T PRK02731 247 LNRVRQPF--N--VNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL-GLEYI-PSVGNFILVDFDDGK----- 315 (367)
T ss_pred HHHccCCC--C--CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCceEEEEECCCCC-----
Confidence 87544332 2 2455555565555422112345667777888888888886 77665 346788888873221
Q ss_pred hHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 415 DLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 415 ~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
...++++.++ ++||.+.+..... .+..||++++ +.+|+++++++|+++++
T Consensus 316 ---~~~~~~~~L~-~~gI~v~~~~~~~-----~~~~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 316 ---DAAEAYQALL-KRGVIVRPVAGYG-----LPNALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred ---CHHHHHHHHH-HCCEEEEeCCCCC-----CCCeEEEecC---CHHHHHHHHHHHHHHHh
Confidence 1335676654 5699998764332 1345999984 78999999999998764
No 127
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.95 E-value=2.6e-25 Score=227.06 Aligned_cols=339 Identities=18% Similarity=0.218 Sum_probs=225.9
Q ss_pred eeEEEeecC-CCCCCCCChHHHHHHHHHH-HhcCCCCCCCCCcccChH--HHHH-HHHHHHhhhCCCCE-EEecccHHHH
Q 011567 109 KEVVNFASA-NYLGLIGHEKLLESCTSAL-EKYGVGSCGPRGFYGTID--VHLD-CEARIAKFLGTPDS-ILYSYGLSTM 182 (483)
Q Consensus 109 ~~~id~~s~-~~lG~~~~p~i~~a~~~~l-~~~g~g~~~~~~~~g~~~--~~~~-l~~~La~~~g~e~~-i~~~sG~~a~ 182 (483)
|++|||..+ +++ +|++++++.+.+ .+|+.|.++++.+.|+.. ...+ .++.+++++|.+.. +++++|++|+
T Consensus 19 ~~~~~~~~~~~~~----~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a~ 94 (402)
T cd00378 19 RETLELIASENFT----SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQAN 94 (402)
T ss_pred HhCeeeeccCCcC----CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCCcHHHH
Confidence 457887665 564 689999998776 678888888876555432 2233 34567889998765 4557899999
Q ss_pred HhhhhhhccCCcEEEEcCCchhHHHhH-----hhhcCCeEEE--ecCC------CHHHHHHHHHHhhhhhhhccCccEEE
Q 011567 183 FSAIPCFCKKGDLIVADEGVHWGIQNG-----LYLSRSTVVY--FKHN------DMDSLRNTLERVTADNKRAKKLRRYI 249 (483)
Q Consensus 183 ~~ai~~~~~~gdiI~~~~~~h~s~~~g-----~~~s~~~v~~--~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~i 249 (483)
..++.++.++||.|+++.+.|.+.... +...|.++.. ++++ |++++++.+... ++++|
T Consensus 95 ~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~---------~~~~v 165 (402)
T cd00378 95 LAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEF---------KPKLI 165 (402)
T ss_pred HHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhC---------CCCEE
Confidence 999999999999999998888654322 4445554433 3333 788888777532 13455
Q ss_pred EEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccc-cCCCceeecc
Q 011567 250 VVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-ATEGGFCTGS 328 (483)
Q Consensus 250 v~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~l-g~~GG~i~~~ 328 (483)
++.+. ..|...|+++|.++|++||+++|+||+|..|..+. |. ....+. .+|++++|++|++ |+.||+++++
T Consensus 166 ~~~~~--~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~-g~-~~~~~~----~~dv~~~s~sK~l~G~~gg~i~~~ 237 (402)
T cd00378 166 VAGAS--AYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAG-GV-FPNPLP----GADVVTTTTHKTLRGPRGGLILTR 237 (402)
T ss_pred EecCc--ccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhc-cc-CCCccc----CCcEEEeccccCCCCCCceEEEec
Confidence 54332 23677799999999999999999999987665432 21 111111 3488999999999 5778998887
Q ss_pred H-HHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHhhccCCCceeec-CCCCCEEEEEe
Q 011567 329 A-RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIAS-NPESPIVFLIL 405 (483)
Q Consensus 329 ~-~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~-~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~-~~~~~i~~l~l 405 (483)
+ ++++.++.....+.++++..+..++++.+...... ..++.+++++++.+++.+.|++. |+.+.. +..++++++.+
T Consensus 238 ~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~v~v~~ 316 (402)
T cd00378 238 KGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTDNHLVLVDL 316 (402)
T ss_pred cHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCCeEEEEeC
Confidence 6 88888765444444443322333333332322333 23457788999999999999886 887753 34677888887
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccccc-CCCCCceEEEccC----CCCHHHHHHHHHHHHHHHHH
Q 011567 406 EKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDK-CRLPVGIRLFVSA----AHSEADLVKACESLKRISAV 477 (483)
Q Consensus 406 ~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~-~~~~~~lRi~~~~----~~t~edi~~~~~~l~~~~~~ 477 (483)
.+... + ..++.+ .|+++||.+.+..+|.... ...+.++|++++. .++++|++++++.|++++++
T Consensus 317 ~~~~~----~---~~~~~~-~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 317 RPKGI----T---GKAAED-ALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred CccCC----C---HHHHHH-HHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 53211 1 113333 4667799998755544311 0113569998876 45899999999999987653
No 128
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.94 E-value=6.2e-25 Score=225.13 Aligned_cols=338 Identities=18% Similarity=0.229 Sum_probs=227.3
Q ss_pred eeEEEeecC-CCCCCCCChHHHHHHHHHH-HhcCCCCCCCCCcccChHHHHHHHH----HHHhhhCCCCE-EEecccHHH
Q 011567 109 KEVVNFASA-NYLGLIGHEKLLESCTSAL-EKYGVGSCGPRGFYGTIDVHLDCEA----RIAKFLGTPDS-ILYSYGLST 181 (483)
Q Consensus 109 ~~~id~~s~-~~lG~~~~p~i~~a~~~~l-~~~g~g~~~~~~~~g~~~~~~~l~~----~La~~~g~e~~-i~~~sG~~a 181 (483)
|.+|++.++ |+ .+|.+++++.+.+ .+|+.|.++++.+.|. +...++++ .+++++|.+.. +++++|++|
T Consensus 25 ~~~~~l~~~~n~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~a 99 (416)
T PRK00011 25 EEHIELIASENF----VSPAVMEAQGSVLTNKYAEGYPGKRYYGGC-EYVDVVEQLAIDRAKELFGAEYANVQPHSGSQA 99 (416)
T ss_pred hcCeeeecccCc----CCHHHHHHHhchhhcccccCCCCccccccc-hHHHHHHHHHHHHHHHHhCCCceeeecCCchHH
Confidence 567888887 55 3689999987775 4677777777765553 34555555 89999998866 556889999
Q ss_pred HHhhhhhhccCCcEEEEcCCchhHHHh---Hhh--hcCCeEEEecC------CCHHHHHHHHHHhhhhhhhccCccEEEE
Q 011567 182 MFSAIPCFCKKGDLIVADEGVHWGIQN---GLY--LSRSTVVYFKH------NDMDSLRNTLERVTADNKRAKKLRRYIV 250 (483)
Q Consensus 182 ~~~ai~~~~~~gdiI~~~~~~h~s~~~---g~~--~s~~~v~~~~~------~d~~~Le~~l~~~~~~~~~~~~~~~~iv 250 (483)
+..++.++.++||.|+++.+.|.+... ... ..+.+++.++. .|++++++.+++. ++++|+
T Consensus 100 l~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~---------~~k~v~ 170 (416)
T PRK00011 100 NAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEH---------KPKLII 170 (416)
T ss_pred HHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhc---------CCCEEE
Confidence 999999999999999999988865421 111 22345555543 3788888877542 134555
Q ss_pred EecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccc-cCCCceeecc-
Q 011567 251 VEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-ATEGGFCTGS- 328 (483)
Q Consensus 251 ~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~l-g~~GG~i~~~- 328 (483)
+.+ ++.|...|+++|.++|++||+++|+|++|+.|.++. |... ..+ ..+|++++|++|++ |+.||+++++
T Consensus 171 ~~~--~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~---g~~~-~~~--~~~di~~~S~~K~l~g~~gg~i~~~~ 242 (416)
T PRK00011 171 AGA--SAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAA---GVHP-SPV--PHADVVTTTTHKTLRGPRGGLILTND 242 (416)
T ss_pred ECC--CcCCCccCHHHHHHHHHHcCCEEEEECcchhccccc---CccC-CCC--CCCcEEEecCCcCCCCCCceEEEeCC
Confidence 532 234677899999999999999999999998776542 1110 111 14589999999999 5778999885
Q ss_pred HHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHhhccCCCceeec-CCCCCEEEEEec
Q 011567 329 ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEEN-PDLITKLKKNTAILRTGLSDIHGLSIAS-NPESPIVFLILE 406 (483)
Q Consensus 329 ~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~-~~~~~~l~~~~~~l~~~L~~~~~~~i~~-~~~~~i~~l~l~ 406 (483)
+++.+.++.....+.+++...+..++...+.++.+++. ++.+++++++++++++.|++. |+++.. ...++++++.+.
T Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~ 321 (416)
T PRK00011 243 EELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLR 321 (416)
T ss_pred HHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCc
Confidence 68888776554444444433344444344444544433 567899999999999999986 877653 234577778774
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccc-cccCCCCCceEEEcc----CCCCHHHHHHHHHHHHHHHHH
Q 011567 407 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSM-LDKCRLPVGIRLFVS----AAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~-~~~~~~~~~lRi~~~----~~~t~edi~~~~~~l~~~~~~ 477 (483)
+.. . + ..++.+ .|+++||.+.....+. ......+.++|++.. ..+|++|+++++++|++++..
T Consensus 322 ~~~--~--~---~~~~~~-~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 322 SKG--L--T---GKEAEA-ALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred ccC--C--C---HHHHHH-HHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 221 0 1 124455 4566799997432211 001112356999542 267899999999999988654
No 129
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.94 E-value=1.2e-24 Score=219.83 Aligned_cols=316 Identities=16% Similarity=0.174 Sum_probs=224.3
Q ss_pred CChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCC--EEEecccHHHHHhhhhhhcc----CCcEEE
Q 011567 124 GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPD--SILYSYGLSTMFSAIPCFCK----KGDLIV 197 (483)
Q Consensus 124 ~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~--~i~~~sG~~a~~~ai~~~~~----~gdiI~ 197 (483)
.+|.+.+++.++++.. . ..+..+.+....+.++++.+++++|.+. .+++++|++++..+++++.. ++|.|+
T Consensus 32 ~~~~~~~a~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl 108 (371)
T PRK13520 32 PHPIARKAHEMFLETN-L--GDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIV 108 (371)
T ss_pred chHHHHHHHHHHHhcC-C--CCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEE
Confidence 6799999999988763 1 1222234556677899999999999753 56778999999998877653 578899
Q ss_pred EcCCchhHHHhHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHH
Q 011567 198 ADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKE 272 (483)
Q Consensus 198 ~~~~~h~s~~~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~ 272 (483)
++...|.++.++++..|.+++.++.+ |+++|++.+.+. +++|++....+++|.+.|+++|.++|+
T Consensus 109 ~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~----------~~~vi~~~~~~~tG~~~~l~~I~~l~~ 178 (371)
T PRK13520 109 VPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDDN----------TIGIVGIAGTTELGQVDPIPELSKIAL 178 (371)
T ss_pred ecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhhC----------CEEEEEEcCCcCCcccCCHHHHHHHHH
Confidence 99999999998888888888877643 778888777531 344444444567899999999999999
Q ss_pred HcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEcccccccc---CCCceeeccHHHHHHHHhcCCceee-----
Q 011567 273 KYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA---TEGGFCTGSARVVDHQRLSSSGYVF----- 344 (483)
Q Consensus 273 k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg---~~GG~i~~~~~~~~~~~~~~~~~~f----- 344 (483)
+||+++++|++|+++.++....+. .+++....+|.++.|.+|... +.|++++.++++.+.+.. ..+|.+
T Consensus 179 ~~g~~livD~a~~~~~~~~~~~~~--~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~-~~~~~~~~~~~ 255 (371)
T PRK13520 179 ENGIFLHVDAAFGGFVIPFLDDPP--NFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDESYLDALAV-DTPYLTSKKQA 255 (371)
T ss_pred HcCCCEEEEecchhHHHHhhcCCC--CccccCCCCceEEECCccccCccCCceEEEEcCHHHHHhhcc-cCccccCCCCc
Confidence 999999999999877643211111 122222456888888899764 234556677777776642 223322
Q ss_pred --cCCCcHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHH
Q 011567 345 --SASLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLE 420 (483)
Q Consensus 345 --s~~~~p~~~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~ 420 (483)
.++.++..++++.++++.+.+. .+++++..++++++.+.|+++ |+++...+..+++.+.+++ .+
T Consensus 256 ~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~-----------~~ 323 (371)
T PRK13520 256 TLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIEPVLNIVAFDDPN-----------PD 323 (371)
T ss_pred ceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCceEEEEecCC-----------HH
Confidence 1223445566777788776433 357888999999999999987 8874434567777776631 23
Q ss_pred HHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 421 DIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 421 ~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
++.+.+. ++||.+..... +..+|++++..+|++|+++++++|+++++
T Consensus 324 ~v~~~L~-~~gi~v~~~~~--------~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 324 EVREKLR-ERGWRVSVTRC--------PEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred HHHHHHH-HCCceeccCCC--------CCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 5666544 45998875432 23499999889999999999999998764
No 130
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.94 E-value=1.7e-24 Score=221.08 Aligned_cols=334 Identities=13% Similarity=0.119 Sum_probs=232.4
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCC-CCCCCccc--ChHHHHHHHHHHHhhhCC--CCEEEe-cccHHHH
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGS-CGPRGFYG--TIDVHLDCEARIAKFLGT--PDSILY-SYGLSTM 182 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~-~~~~~~~g--~~~~~~~l~~~La~~~g~--e~~i~~-~sG~~a~ 182 (483)
.-|+|-++.. . ..+.+.+++.+.++.+.... .+.. ..+ ..+...++++.+|+++|. ++.+++ +++++++
T Consensus 24 ~iYld~a~~~---~-~~~~v~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l 98 (406)
T PRK09295 24 LAYLDSAASA---Q-KPSQVIDAEAEFYRHGYAAVHRGIH-TLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGI 98 (406)
T ss_pred eEEEeCcccc---c-CCHHHHHHHHHHHHhcCCCCCCccc-HHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHH
Confidence 4688888763 3 55788999988887643211 1111 111 234677899999999986 345555 5566888
Q ss_pred Hhhhhh----hccCCcEEEEcCCchhHHH----hHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEE
Q 011567 183 FSAIPC----FCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYI 249 (483)
Q Consensus 183 ~~ai~~----~~~~gdiI~~~~~~h~s~~----~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~i 249 (483)
..++.+ +.++||.|++....|.+.. ...+..|.+++.++.+ |+++|++.+.+ ++++|
T Consensus 99 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~----------~t~lv 168 (406)
T PRK09295 99 NLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDE----------RTRLL 168 (406)
T ss_pred HHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCC----------CcEEE
Confidence 777765 4578999999998887643 2334567788777643 56677666532 26788
Q ss_pred EEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeecc
Q 011567 250 VVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGS 328 (483)
Q Consensus 250 v~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~ 328 (483)
++..+.+++|.+.|+++|.++|+++|+++++|++|+.|... .++...++|++++|++|.+|+.| |+++.+
T Consensus 169 ~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~ 239 (406)
T PRK09295 169 AITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHP---------VDVQALDCDFYVFSGHKLYGPTGIGILYVK 239 (406)
T ss_pred EEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccc---------cCchhcCCCEEEeehhhccCCCCcEEEEEc
Confidence 88899999999999999999999999999999999876431 23333456999999999888776 888888
Q ss_pred HHHHHHHHhcCC-------------------ceeec-CCCcHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhcc
Q 011567 329 ARVVDHQRLSSS-------------------GYVFS-ASLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSD 386 (483)
Q Consensus 329 ~~~~~~~~~~~~-------------------~~~fs-~~~~p~~~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~ 386 (483)
+++++.+..... ++.|. ++.+.....++.++++.+.+. +.+.++.+++.+++++.|++
T Consensus 240 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 319 (406)
T PRK09295 240 EALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLES 319 (406)
T ss_pred hHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 887765431100 01222 245666777777889888652 45778888999999999998
Q ss_pred CCCceeecC-CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccc---cCCCCCceEEEccCCCCHH
Q 011567 387 IHGLSIASN-PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLD---KCRLPVGIRLFVSAAHSEA 462 (483)
Q Consensus 387 ~~~~~i~~~-~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~---~~~~~~~lRi~~~~~~t~e 462 (483)
++++.+.++ ...+++.+.++.. + .+++.. .|+++||.++.+..+... ....+..+|++++..+|++
T Consensus 320 ~~~~~~~~~~~~~~iv~~~~~~~------~---~~~~~~-~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~ 389 (406)
T PRK09295 320 VPDLTLYGPQNRLGVIAFNLGKH------H---AYDVGS-FLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHE 389 (406)
T ss_pred CCCEEEeCCCCCceEEEEEECCc------C---HHHHHH-HHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHH
Confidence 888887754 2356777776421 1 124454 466789999765432110 0111235999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 011567 463 DLVKACESLKRISA 476 (483)
Q Consensus 463 di~~~~~~l~~~~~ 476 (483)
|||+++++|+++..
T Consensus 390 did~l~~~l~~i~~ 403 (406)
T PRK09295 390 EVDRLVAGLQRIHR 403 (406)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998754
No 131
>PRK09082 methionine aminotransferase; Validated
Probab=99.94 E-value=2.7e-24 Score=218.09 Aligned_cols=337 Identities=16% Similarity=0.176 Sum_probs=230.9
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-----CEEEecccHHHHH
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-----DSILYSYGLSTMF 183 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-----~~i~~~sG~~a~~ 183 (483)
+.++||..+.. .+..++.+.+++.+.++..-.+. ....|..++...+++.+.+++|.. +.++.+++++++.
T Consensus 30 ~~~i~l~~g~~-~~~~~~~~~~~~~~~~~~~~~~Y---~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~ 105 (386)
T PRK09082 30 HGAINLSQGFP-DFDGPPYLVEALAYAMAAGHNQY---PPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALF 105 (386)
T ss_pred CCEEEecCCCC-CCCCCHHHHHHHHHHHHcCCCCC---CCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHH
Confidence 45789988733 23246788888888776421211 113456677788888888887752 3444466689999
Q ss_pred hhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCC
Q 011567 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQN 257 (483)
Q Consensus 184 ~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~ 257 (483)
.++.+++++||.|+++.++|.++...++..|.+++.++.+ |++++++.++. ++++|++.+++++
T Consensus 106 ~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~----------~~~~v~l~~p~NP 175 (386)
T PRK09082 106 AAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISP----------RTRLIILNTPHNP 175 (386)
T ss_pred HHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCc----------cceEEEEeCCCCC
Confidence 9999999999999999999999999999889999888763 55666665532 2566777778899
Q ss_pred CCCccC---hHHHHHHHHHcCcEEEEeCccccccccCC-CCccccccCCCCCceeEEEccccccccCCC---ceeeccHH
Q 011567 258 SGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRS-GRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSAR 330 (483)
Q Consensus 258 ~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~-G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~ 330 (483)
+|.+.+ +++|+++|++||+++|+||+|+...++.. +..+..+.+. .+..++++||||++|..| ||++++++
T Consensus 176 tG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~--~~~~i~~~S~SK~~~~~G~RiG~iv~~~~ 253 (386)
T PRK09082 176 SGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPEL--RERAFVVSSFGKTYHVTGWKVGYCVAPAA 253 (386)
T ss_pred CCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCc--cCcEEEEeechhhccchhhhhhhhhCCHH
Confidence 998855 88999999999999999999987666421 2222233232 234788999999998777 99999999
Q ss_pred HHHHHHhcCCceeecCCCcHHHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCC
Q 011567 331 VVDHQRLSSSGYVFSASLPPYLASAAITAIDV-LEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKST 409 (483)
Q Consensus 331 ~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~-l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~ 409 (483)
+++.++.......++. ++....++.+.++. -+...++++.++++.+.+.+.|++. ++++.....+.++++.+++..
T Consensus 254 l~~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~g~~~~~~~~~~~~ 330 (386)
T PRK09082 254 LSAEFRKVHQYNTFTV--NTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS-RFKLLPCEGTYFQLVDYSAIS 330 (386)
T ss_pred HHHHHHHHHhhhcCCC--ChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCeeEEEEEeccccC
Confidence 9888766443333443 44444444344431 1111235667788889999999874 777665545667777774311
Q ss_pred CCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHH
Q 011567 410 GSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 410 ~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
+ ....++++.++++.||.+.++....... .....+|++++. +++++++++++|++
T Consensus 331 ~------~~~~~~~~~l~~~~~v~v~pg~~f~~~~-~~~~~~Ri~~~~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 331 D------LDDVEFCQWLTREHGVAAIPLSVFYADP-FPHRLVRLCFAK--QEETLDAAAERLCQ 385 (386)
T ss_pred C------CCHHHHHHHHHHhCCEEEeCcHHhCCCC-CCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 1 0123577776777899999875321111 012349999864 78999999988875
No 132
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=2.3e-24 Score=216.75 Aligned_cols=334 Identities=19% Similarity=0.218 Sum_probs=241.4
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCC--CCCCCcccChHHHHHHHHHHHhhhCCC--CEEEe-cccHHHHHh
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGS--CGPRGFYGTIDVHLDCEARIAKFLGTP--DSILY-SYGLSTMFS 184 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~--~~~~~~~g~~~~~~~l~~~La~~~g~e--~~i~~-~sG~~a~~~ 184 (483)
-|+|.+.. +. .+..+.+++.+.++.|..+. .......-..+..++.++.+++|+|.+ +.|+| .+.++++..
T Consensus 24 vylD~aa~---~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~ 99 (405)
T COG0520 24 VYLDNAAT---SQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNL 99 (405)
T ss_pred EEecCccc---cc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHH
Confidence 47776654 22 46788999999888764322 221111122357788999999999965 45655 555688888
Q ss_pred hhhhh---ccCCcEEEEcCCchhHHH----hHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEe
Q 011567 185 AIPCF---CKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVE 252 (483)
Q Consensus 185 ai~~~---~~~gdiI~~~~~~h~s~~----~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e 252 (483)
+..++ .++||.|++....|.+.. ...+..|.++++++.+ |+++++.++.. ++++|.+.
T Consensus 100 va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~----------~Tklvais 169 (405)
T COG0520 100 VARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITP----------KTKLVALS 169 (405)
T ss_pred HHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCC----------CceEEEEE
Confidence 88777 588999999888887643 2333457888888754 45566653322 48999999
Q ss_pred cccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccc-cCCC-ceeeccHH
Q 011567 253 AVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-ATEG-GFCTGSAR 330 (483)
Q Consensus 253 ~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~l-g~~G-G~i~~~~~ 330 (483)
.+.+.+|.+.|+++|+++|+++|+++++|.+|+.+.+. .++...++|++++|.+|++ |+.| |++.++++
T Consensus 170 ~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~---------idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~ 240 (405)
T COG0520 170 HVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLP---------IDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKE 240 (405)
T ss_pred CccccccccchHHHHHHHHHHcCCEEEEECccccCccC---------CCchhcCCCEEEEcccccccCCCceEEEEEchH
Confidence 99999999999999999999999999999999987542 4555567799999999955 5656 89999999
Q ss_pred HHHHHHhc-------------------CCceeecCCCcHHH-HHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhccCC
Q 011567 331 VVDHQRLS-------------------SSGYVFSASLPPYL-ASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIH 388 (483)
Q Consensus 331 ~~~~~~~~-------------------~~~~~fs~~~~p~~-~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~~~ 388 (483)
+.+.+... ..++.|.++.|++. ..+..++++++++. .++.++.+++.+++.+.|++++
T Consensus 241 ~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~ 320 (405)
T COG0520 241 LLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELP 320 (405)
T ss_pred HHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88876321 12233444334443 44445788888754 4688889999999999999999
Q ss_pred CceeecCC---CCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc---ccCCCCCceEEEccCCCCHH
Q 011567 389 GLSIASNP---ESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML---DKCRLPVGIRLFVSAAHSEA 462 (483)
Q Consensus 389 ~~~i~~~~---~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~---~~~~~~~~lRi~~~~~~t~e 462 (483)
++.+.+++ +++++.+.+... ...+++.. |.++||.++.+..+.. .....+..+|++++.++|+|
T Consensus 321 ~v~i~g~~~~~r~~~vsF~v~~~---------~~~dv~~~-L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~e 390 (405)
T COG0520 321 GVEIYGPPDADRGGIVSFNVKGI---------HPHDVATL-LDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEE 390 (405)
T ss_pred CeEEecCCcccCceEEEEEeCCC---------CHHHHHHH-HHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHH
Confidence 99988764 688999988543 13356664 5566899987755432 11112344999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 011567 463 DLVKACESLKRISA 476 (483)
Q Consensus 463 di~~~~~~l~~~~~ 476 (483)
|||+++++|+++.+
T Consensus 391 did~l~~aL~~~~~ 404 (405)
T COG0520 391 DVDRLLEALKKALA 404 (405)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998764
No 133
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.94 E-value=3.7e-24 Score=218.55 Aligned_cols=335 Identities=17% Similarity=0.209 Sum_probs=230.1
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhc-CCCCCCCCCccc--ChHHHHHHHHHHHhhhCCC--CEEEe-cccHHHHH
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKY-GVGSCGPRGFYG--TIDVHLDCEARIAKFLGTP--DSILY-SYGLSTMF 183 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~-g~g~~~~~~~~g--~~~~~~~l~~~La~~~g~e--~~i~~-~sG~~a~~ 183 (483)
-|+|.++. |. ..+.+.+++.+.++.. +....++. ..+ ..+...++++.+++++|.+ +.+++ +++++++.
T Consensus 20 ~yld~~~~---~~-~p~~v~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~ 94 (403)
T TIGR01979 20 VYLDSAAT---SQ-KPQQVIDAVAEYYRNSNANVHRGIH-TLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESIN 94 (403)
T ss_pred EEEeCccc---cC-CCHHHHHHHHHHHHhCCCCCCCCcc-HHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHH
Confidence 47777764 43 5578888888877652 22122211 111 1235678999999999965 34544 66667777
Q ss_pred hhhhhh----ccCCcEEEEcCCchhHHH----hHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEE
Q 011567 184 SAIPCF----CKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIV 250 (483)
Q Consensus 184 ~ai~~~----~~~gdiI~~~~~~h~s~~----~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv 250 (483)
.++.++ .++||.|++....|.+.. ......|.+++.++.+ |++++++.+.+ ++++|+
T Consensus 95 ~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~----------~~~lv~ 164 (403)
T TIGR01979 95 LVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTE----------KTKLVA 164 (403)
T ss_pred HHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhcc----------CCeEEE
Confidence 777664 578999999998887743 3344567887777643 56666665532 367888
Q ss_pred EecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccH
Q 011567 251 VEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSA 329 (483)
Q Consensus 251 ~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~ 329 (483)
+..+.+++|.+.|+++|.++|++||+++++|++|+.|... .++...++|++++|++|.+|+.| |+++.++
T Consensus 165 ~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~G~g~l~~~~ 235 (403)
T TIGR01979 165 ITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMP---------VDVQALDCDFYVFSGHKMYGPTGIGVLYGKE 235 (403)
T ss_pred EEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccc---------cCccccCCCEEEEecccccCCCCceEEEEch
Confidence 8889999999999999999999999999999999876432 22222346999999999998776 8888888
Q ss_pred HHHHHHHhcCC------------------ceeec-CCCcHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhccCC
Q 011567 330 RVVDHQRLSSS------------------GYVFS-ASLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIH 388 (483)
Q Consensus 330 ~~~~~~~~~~~------------------~~~fs-~~~~p~~~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~~~ 388 (483)
++++.++.... ++.|. ++.+...++++.++++.+.+. +.+.++..++.+++++.|++++
T Consensus 236 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 315 (403)
T TIGR01979 236 ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIP 315 (403)
T ss_pred HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 87766532111 11222 234555566667788877642 4578888999999999998888
Q ss_pred CceeecCC----CCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc---ccCCCCCceEEEccCCCCH
Q 011567 389 GLSIASNP----ESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML---DKCRLPVGIRLFVSAAHSE 461 (483)
Q Consensus 389 ~~~i~~~~----~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~---~~~~~~~~lRi~~~~~~t~ 461 (483)
++++..+. .++++.+.+... + ..++.+ .|+++||.++.+..... .....+..+|++++..+|+
T Consensus 316 g~~~~~~~~~~~~~~~v~~~~~~~------~---~~~~~~-~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~ 385 (403)
T TIGR01979 316 GLRIYGPRDAEDRGGIISFNVEGV------H---PHDVGT-ILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTE 385 (403)
T ss_pred CEEEeCCCCccccCceEEEEeCCc------C---HHHHHH-HHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCH
Confidence 88887542 367888877421 1 124554 46677999976432110 0111134599999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011567 462 ADLVKACESLKRISAVV 478 (483)
Q Consensus 462 edi~~~~~~l~~~~~~~ 478 (483)
+|+++++++|+++++.+
T Consensus 386 ~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 386 EDIDALVEALKKVRKFF 402 (403)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999877653
No 134
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.94 E-value=9.7e-24 Score=215.09 Aligned_cols=341 Identities=17% Similarity=0.177 Sum_probs=231.2
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC-----CCEEEecccHHHHH
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT-----PDSILYSYGLSTMF 183 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~-----e~~i~~~sG~~a~~ 183 (483)
++.+||..++.--+..+|.+.+++.+.+...+.. +.....|..++...+++.+++++|. ++.++.+++.+++.
T Consensus 39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~--~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~ 116 (405)
T PRK06207 39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQ--AYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALF 116 (405)
T ss_pred CCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCc--cCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHH
Confidence 4678888764322235578888888888653221 1111335566677777777777673 34555566678999
Q ss_pred hhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC----------CHHHHHHHHHHhhhhhhhccCccEEEEEec
Q 011567 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----------DMDSLRNTLERVTADNKRAKKLRRYIVVEA 253 (483)
Q Consensus 184 ~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~----------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~ 253 (483)
.++.+++++||.|++..+.|+.....+...|.+++.++.. |+++|++.+++ .+++|++..
T Consensus 117 ~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~----------~~k~v~l~~ 186 (405)
T PRK06207 117 LAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA----------GVRVFLFSN 186 (405)
T ss_pred HHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh----------cCeEEEECC
Confidence 9999999999999999999999888888889888766532 56777766643 245666666
Q ss_pred ccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCcccc--ccCCCCCceeEEEccccccccCCC---cee
Q 011567 254 VYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTE--HCGVPVDKIDIVTAAMGHALATEG---GFC 325 (483)
Q Consensus 254 v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~--~~~v~~~~~Di~~~s~~K~lg~~G---G~i 325 (483)
++|++|.+.+ +++|+++|++||+++|+||+|+...+.. ..... .+...+ +.-++++||||+++.+| ||+
T Consensus 187 P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~--~~~~~~~~~~~~~-~~vi~i~SfSK~~~lpGlRiG~i 263 (405)
T PRK06207 187 PNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDG--TSYTHLRALPIDP-ENVITIMGPSKTESLSGYRLGVA 263 (405)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC--CCCCchhcCCCCc-CcEEEEecchhhccCcccceEEE
Confidence 6899999998 7889999999999999999998765532 11111 112222 23588999999998656 999
Q ss_pred eccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEE
Q 011567 326 TGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL-EENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLI 404 (483)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l-~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~ 404 (483)
++++++++.+......+..+ .+.+...++.++++.- ....+.+++.+++.+.+.+.|++++++.+..+..+.++++.
T Consensus 264 i~~~~l~~~~~~~~~~~~~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~ 341 (405)
T PRK06207 264 FGSPAIIDRMEKLQAIVSLR--AAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPR 341 (405)
T ss_pred EcCHHHHHHHHHHHhHhccC--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEe
Confidence 99999988876543333222 2344444444455321 00123566677778888888887767776655567788888
Q ss_pred ecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 405 LEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 405 l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
++.... + ..++++.++++.||.+.++..... ..+..+||++.. +++++++++++|++++++.
T Consensus 342 l~~~~~----~---~~~~~~~l~~~~gV~v~pG~~F~~---~~~~~~Ris~~~--~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 342 LPRLAV----S---LHDFVKILRLQAGVIVTPGTEFSP---HTADSIRLNFSQ--DHAAAVAAAERIAQLIERY 403 (405)
T ss_pred CcccCC----C---HHHHHHHHHHhcCEEEeCchHhCC---CCCCeEEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 753110 1 235677666567999998754321 012459999974 7899999999999988653
No 135
>PRK07324 transaminase; Validated
Probab=99.94 E-value=2.1e-24 Score=217.70 Aligned_cols=332 Identities=17% Similarity=0.169 Sum_probs=229.4
Q ss_pred ECCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC---CCEEEecccHHHH
Q 011567 106 ISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT---PDSILYSYGLSTM 182 (483)
Q Consensus 106 ~~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~---e~~i~~~sG~~a~ 182 (483)
..|..+++++-+.+.-. .++.+ +++.+++.+...+. +...-..+|++.+|++++. ++.++++++++++
T Consensus 23 ~~~~~~~~~~~~e~~~~-~~~~~-~~~~~~~~~~~~~Y-------~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al 93 (373)
T PRK07324 23 IAESCIDSLTLEELLAL-AGKNP-EAFYQELGQKKLTY-------GWIEGSPEFKEAVASLYQNVKPENILQTNGATGAN 93 (373)
T ss_pred cccCCCCCCcHHHHHhc-cCcch-HHHHHHHhcCCccC-------CCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHH
Confidence 45667777776644322 44566 88888877643322 2222235788999998752 3455567777999
Q ss_pred HhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEEeccc
Q 011567 183 FSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVY 255 (483)
Q Consensus 183 ~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~ 255 (483)
..++.+++++||.|+++.++|..+...++..|.+++.++.. |++++++.+. + ++++|++..++
T Consensus 94 ~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~---~-------~~kli~i~~p~ 163 (373)
T PRK07324 94 FLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVR---P-------NTKLICINNAN 163 (373)
T ss_pred HHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCC---C-------CCcEEEEeCCC
Confidence 99999999999999999999988888888889888877642 4555554432 2 25688888889
Q ss_pred CCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccH
Q 011567 256 QNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSA 329 (483)
Q Consensus 256 ~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~ 329 (483)
|++|.+.+ +++|+++|++||+++|+||+|+....+ +. ........ +..|+++|+||++|..| ||+++++
T Consensus 164 NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~--~~-~~s~~~~~--~~~I~~~s~SK~~~~~G~RiG~i~~~~ 238 (373)
T PRK07324 164 NPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDED--GS-TPSIADLY--EKGISTNSMSKTYSLPGIRVGWIAANE 238 (373)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccC--CC-CCChhhcc--CCEEEEecchhhcCCccceeEEEecCH
Confidence 99999998 899999999999999999999764433 11 11112221 22578899999998777 9999999
Q ss_pred HHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCC
Q 011567 330 RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKS 408 (483)
Q Consensus 330 ~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~ 408 (483)
++++.++.......++. +++...++..+++..+. ....++.++++.+.+.+.|++.+++....+..+...++.+...
T Consensus 239 ~li~~~~~~~~~~~~~~--~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~ 316 (373)
T PRK07324 239 EVIDILRKYRDYTMICA--GVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVD 316 (373)
T ss_pred HHHHHHHHHhCcEEecC--ChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCC
Confidence 99888776544333333 44444555555542211 1234566677778888888776666665554556667776432
Q ss_pred CCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 409 TGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 409 ~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
. ...+++++++++.||.+.++..... +..+||++. .+++.++++++.|++++++.
T Consensus 317 ~--------~~~~~~~~ll~~~gv~v~pg~~F~~-----~~~iRis~~--~~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 317 M--------PSEDFCLKLLKETGVLLVPGNRFDL-----EGHVRIGYC--CDTETLKKGLKKLSEFLREF 371 (373)
T ss_pred C--------CHHHHHHHHHHhcCEEEECccccCC-----CCeEEEEec--CCHHHHHHHHHHHHHHHHhc
Confidence 1 1235777777778999998764432 245999986 46899999999999988753
No 136
>PRK07682 hypothetical protein; Validated
Probab=99.94 E-value=6.7e-24 Score=214.78 Aligned_cols=337 Identities=16% Similarity=0.144 Sum_probs=224.0
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC----C-CEEEecccHHHHHh
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT----P-DSILYSYGLSTMFS 184 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~----e-~~i~~~sG~~a~~~ 184 (483)
.+|+|..+.. .+...+.+.+++.+.++..-.+.+. ..|..++...+++.+.+.+|. + +.++.+++++|+..
T Consensus 21 ~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~ 96 (378)
T PRK07682 21 GVISLGVGEP-DFVTPWNVREASIRSLEQGYTSYTA---NAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDV 96 (378)
T ss_pred CeEEeCCCCC-CCCCCHHHHHHHHHHHhcCCCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 4788888733 1224567788888877642111111 223344444444444444343 2 34555666799999
Q ss_pred hhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCC
Q 011567 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQN 257 (483)
Q Consensus 185 ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~ 257 (483)
++++++++||.|+++++.|..+...++..|.+++.++.. |+++|++.+.. +++++++..++|+
T Consensus 97 ~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----------~~~~v~~~~p~NP 166 (378)
T PRK07682 97 AMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITA----------KTKAILLCSPNNP 166 (378)
T ss_pred HHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCc----------ccEEEEEECCCCC
Confidence 999999999999999999988888888888887766531 56666665532 2556666667889
Q ss_pred CCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHH
Q 011567 258 SGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARV 331 (483)
Q Consensus 258 ~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~ 331 (483)
+|.+.+ +++|+++|++|++++|+||+|+...++.....+....+. .+..++++|+||+||.+| ||+++++++
T Consensus 167 tG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~ 244 (378)
T PRK07682 167 TGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGM--RERTILISGFSKGFAMTGWRLGFIAAPVYF 244 (378)
T ss_pred cCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccc--cCCEEEEecCcccccChhhhhhhhhcCHHH
Confidence 999887 899999999999999999999876654322222222222 234788999999999777 999999999
Q ss_pred HHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCC
Q 011567 332 VDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTG 410 (483)
Q Consensus 332 ~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~ 410 (483)
++.+..... +.. .+.+++...++.++|+..+. ..+.++.++++.+.+.+.|+++ |+.+..+..+.++++.+.....
T Consensus 245 i~~l~~~~~-~~~-~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~g~~~~~~~~~~~~~ 321 (378)
T PRK07682 245 SEAMLKIHQ-YSM-MCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCHVPGGAFYAFPSISSTGL 321 (378)
T ss_pred HHHHHHHHH-hhc-cCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCccCCCCeeEEEEEeccCCCC
Confidence 988764322 211 12355666666666643211 1346777888899999999886 7766544444555555532110
Q ss_pred CchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 411 SMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 411 ~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
+ ..++++.+++++||.+.++...... .++.+||++.. +++++++++++|++++++
T Consensus 322 ----~---~~~~~~~ll~~~gv~v~pg~~f~~~---~~~~iRis~~~--~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 322 ----S---SEEFAEQLLLEEKVAVVPGSVFGES---GEGFIRCSYAT--SLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred ----C---HHHHHHHHHHhCCEEEcCchhhCcC---CCCeEEEEeCC--CHHHHHHHHHHHHHHHhh
Confidence 1 2356777776679999886533210 13459999874 789999999999998765
No 137
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.94 E-value=7.2e-24 Score=214.21 Aligned_cols=326 Identities=17% Similarity=0.234 Sum_probs=227.9
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC--CEEEecccHHHHHh
Q 011567 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFS 184 (483)
Q Consensus 107 ~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e--~~i~~~sG~~a~~~ 184 (483)
+|+.+++++.+ ++|.+.++..+.+++. .+ .+..+.+..+.+.++++.|++++|.+ ..+++++|++++..
T Consensus 21 ~~~~~~~~~~~------~~~~~~~a~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~ 91 (373)
T TIGR03812 21 DGRILGSMCTN------PHPIAVKAYDMFIETN-LG--DPGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQ 91 (373)
T ss_pred CCcEEEEEeCC------chHHHHHHHHHHhhcC-CC--CcccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHH
Confidence 35666777764 6677778877766553 22 22223455677899999999999975 45778889999888
Q ss_pred hhhhhc------cCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEec
Q 011567 185 AIPCFC------KKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEA 253 (483)
Q Consensus 185 ai~~~~------~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~ 253 (483)
++.++. ++||.|+++...|.++...++..|.+++.++++ |++++++.+++. +.+++++.+
T Consensus 92 ~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~~---------~~~vv~~~~ 162 (373)
T TIGR03812 92 AVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLIDDN---------TIGIVGIAG 162 (373)
T ss_pred HHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhhC---------cEEEEEECC
Confidence 776654 467899999999999999888889998888764 677777776431 234566654
Q ss_pred ccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cccCCCCCceeEEEccccccc-c--CCCceeeccH
Q 011567 254 VYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EHCGVPVDKIDIVTAAMGHAL-A--TEGGFCTGSA 329 (483)
Q Consensus 254 v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~~~v~~~~~Di~~~s~~K~l-g--~~GG~i~~~~ 329 (483)
.+++|.+.|+++|.++|++||+++|+|++|+.+.++-.+.|.. ....+....+|.++.|.+|+. + +.||++++++
T Consensus 163 -~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~ 241 (373)
T TIGR03812 163 -TTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSK 241 (373)
T ss_pred -CCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCH
Confidence 5678999999999999999999999999998765431111110 011121124578878889953 2 2356777888
Q ss_pred HHHHHHHhcCCceeec-------CCCcHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhccCCCceeecCCCCCE
Q 011567 330 RVVDHQRLSSSGYVFS-------ASLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASNPESPI 400 (483)
Q Consensus 330 ~~~~~~~~~~~~~~fs-------~~~~p~~~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i 400 (483)
++.+.++.. .+|.+. ++.++..++++.++++.+.+. ++..++..++++++++.|+++ ++.....+..++
T Consensus 242 ~~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~ 319 (373)
T TIGR03812 242 SYLKYLSVD-APYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI-GFEPVIEPVLNI 319 (373)
T ss_pred HHHhhhccc-CcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCCceE
Confidence 887766432 234332 234556677777888877532 357889999999999999987 665333456777
Q ss_pred EEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHH
Q 011567 401 VFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 401 ~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
+.+.+++ ..++.+.+ .++||+++.... +..||++++..+|++|+++++++|++
T Consensus 320 v~~~~~~-----------~~~v~~~L-~~~gi~v~~~~~--------~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 320 VAFEVDD-----------PEEVRKKL-RDRGWYVSVTRC--------PKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred EEEEeCC-----------HHHHHHHH-HHCCceeccCCC--------CCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 7776631 12566654 456999875432 24599999999999999999999975
No 138
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.94 E-value=5.9e-24 Score=218.32 Aligned_cols=337 Identities=15% Similarity=0.162 Sum_probs=230.4
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCccc--ChHHHHHHHHHHHhhhCCC--CEEEe-cccHHHHHh
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYG--TIDVHLDCEARIAKFLGTP--DSILY-SYGLSTMFS 184 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g--~~~~~~~l~~~La~~~g~e--~~i~~-~sG~~a~~~ 184 (483)
-|+|.++. |. ..+.+.+++.+.++++..+........+ ..+...++++.+++++|.+ +.+++ +++++++..
T Consensus 34 iyLd~a~~---~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~ 109 (424)
T PLN02855 34 VYLDNAAT---SQ-KPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINL 109 (424)
T ss_pred EEeeCccc---cC-CCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHH
Confidence 57777654 33 5578899998888775432211111111 1235678999999999973 34555 666788877
Q ss_pred hhhh----hccCCcEEEEcCCchhHHHhH----hhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEE
Q 011567 185 AIPC----FCKKGDLIVADEGVHWGIQNG----LYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVV 251 (483)
Q Consensus 185 ai~~----~~~~gdiI~~~~~~h~s~~~g----~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~ 251 (483)
++.+ ..++||.|++....|.+.... .+..|.+++.++.+ |++++++.+.. ++++|++
T Consensus 110 i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~----------~t~lv~i 179 (424)
T PLN02855 110 VAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSE----------KTKLVAT 179 (424)
T ss_pred HHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhcc----------CceEEEE
Confidence 7765 357899999988888765432 34557787776542 56667666632 3678899
Q ss_pred ecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccHH
Q 011567 252 EAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSAR 330 (483)
Q Consensus 252 e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~~ 330 (483)
..+.+++|.+.|+++|.++|++||+++++|++|+.|... +++...++|++++|++|.+|+.| ||++.+++
T Consensus 180 ~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~ 250 (424)
T PLN02855 180 HHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMP---------VDVQTLGADFLVASSHKMCGPTGIGFLWGKSD 250 (424)
T ss_pred eCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcC---------CCchhcCCCEEEeecccccCCCccEEEEEchh
Confidence 999999999999999999999999999999999865321 23332345999999999888766 89888888
Q ss_pred HHHHHHhcCCc------------------eeecC-CCcHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhccCCC
Q 011567 331 VVDHQRLSSSG------------------YVFSA-SLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHG 389 (483)
Q Consensus 331 ~~~~~~~~~~~------------------~~fs~-~~~p~~~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~~~~ 389 (483)
+++.+.....+ -.|.. +.+....++..++++.+.+. +++.++..++.+++++.|+++++
T Consensus 251 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g 330 (424)
T PLN02855 251 LLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPG 330 (424)
T ss_pred hhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 87665322100 01222 34455556666788877642 46778889999999999988888
Q ss_pred ceeecCC------CCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc---ccCCCCCceEEEccCCCC
Q 011567 390 LSIASNP------ESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML---DKCRLPVGIRLFVSAAHS 460 (483)
Q Consensus 390 ~~i~~~~------~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~---~~~~~~~~lRi~~~~~~t 460 (483)
+++.++. .++++.+.+... + ..++.+.+.+++||.++.+..... .....+..||++++..+|
T Consensus 331 ~~i~~~~~~~~~~r~~~v~~~~~~~------~---~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt 401 (424)
T PLN02855 331 VRIYGPKPSEGVGRAALCAFNVEGI------H---PTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNT 401 (424)
T ss_pred EEEeCCCcccccCcccEEEEEECCc------C---HHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCC
Confidence 8887532 346777776421 1 224666533333999886542210 000112459999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 011567 461 EADLVKACESLKRISAVV 478 (483)
Q Consensus 461 ~edi~~~~~~l~~~~~~~ 478 (483)
++||++++++|+++++.+
T Consensus 402 ~~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 402 KEEVDAFIHALKDTIAFF 419 (424)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998764
No 139
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.4e-23 Score=213.14 Aligned_cols=342 Identities=11% Similarity=0.110 Sum_probs=232.0
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC----CCEEEe-cccHHHHHh
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT----PDSILY-SYGLSTMFS 184 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~----e~~i~~-~sG~~a~~~ 184 (483)
.++++..+.+- +..++.+.+|+.+.+.....+ ......|..+....+++.+++++|. ++.+++ +++.+++..
T Consensus 28 ~~~~l~~g~~~-~~~~~~~~~a~~~~~~~~~~~--~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~ 104 (389)
T PRK05957 28 GTISLGQGVVS-YPPPPEAIEALNNFLANPENH--KYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104 (389)
T ss_pred CeEEccCCCCC-CCCCHHHHHHHHHHHhCCCCC--CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHH
Confidence 46777776331 335678888888877643221 1222346677888899999998884 445555 455578888
Q ss_pred hhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCC
Q 011567 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSG 259 (483)
Q Consensus 185 ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G 259 (483)
++.+++++||.|+++.++|......+...|.+++.++.+ |++++++.++. ++++|++..+++++|
T Consensus 105 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----------~~klv~~~~p~NPtG 174 (389)
T PRK05957 105 AILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITP----------KTRAIVTISPNNPTG 174 (389)
T ss_pred HHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCc----------CceEEEEeCCCCCCC
Confidence 888888999999999988877777777788888777643 56666665532 256777777899999
Q ss_pred CccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCC-CCCceeEEEccccccccCCC---ceeeccHHHH
Q 011567 260 QIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGV-PVDKIDIVTAAMGHALATEG---GFCTGSARVV 332 (483)
Q Consensus 260 ~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v-~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~ 332 (483)
.+.| +++|+++|++||+++|+||+|+...++.. .......+ +.....|++.|+||.+|..| ||++++++++
T Consensus 175 ~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~ 252 (389)
T PRK05957 175 VVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGV--KHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLL 252 (389)
T ss_pred cCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCC--CccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHH
Confidence 9998 88999999999999999999986655421 11111111 11234688899999999777 9999999999
Q ss_pred HHHHhcCCceeecCCCcHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHhhccCCCc-eeecCCCCCEEEEEecCCCC
Q 011567 333 DHQRLSSSGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGL-SIASNPESPIVFLILEKSTG 410 (483)
Q Consensus 333 ~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~-~~~~~~~~l~~~~~~l~~~L~~~~~~-~i~~~~~~~i~~l~l~~~~~ 410 (483)
+.+......+..+ .+.....++..+++.-. ...+..++++++.+.+.+.|++++++ .+..+..+.++++.+....
T Consensus 253 ~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~~- 329 (389)
T PRK05957 253 EAIKKIQDTILIC--PPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTDL- 329 (389)
T ss_pred HHHHHHHhhcccC--CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCCC-
Confidence 8876543322222 23344444444443211 01235567788888898999877563 5444434566777764321
Q ss_pred CchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 411 SMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 411 ~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
...++++++++++||.+.++....... ...+||++.. .++++++++++.|.+.+++++.
T Consensus 330 -------~~~~~~~~l~~~~gv~v~pg~~f~~~~---~~~iRis~~~-~~~~~l~~~~~~l~~~~~~~~~ 388 (389)
T PRK05957 330 -------NDFELVKQLIREYRVAVIPGTTFGMKN---GCYLRIAYGA-LQKATAKEGIERLVQGLKTIVQ 388 (389)
T ss_pred -------ChHHHHHHHHHHCCEEEccchhhCCCC---CCEEEEEEec-CCHHHHHHHHHHHHHHHHhhhc
Confidence 123577777766799999875432210 2359999865 5799999999999999988764
No 140
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.94 E-value=8.4e-24 Score=212.35 Aligned_cols=291 Identities=16% Similarity=0.204 Sum_probs=207.4
Q ss_pred hHHHHHHHHHHHhhhCCC--C-EEEecccHHHHHhhhhhhccCCcEEEEcCCchhH--HHhHhhhcCCeEEEecC-----
Q 011567 153 IDVHLDCEARIAKFLGTP--D-SILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWG--IQNGLYLSRSTVVYFKH----- 222 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e--~-~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s--~~~g~~~s~~~v~~~~~----- 222 (483)
.+...++++.+++++|.+ + .+++++|++++..++.++.++||.|++....|++ ....++..|.+++.++.
T Consensus 31 ~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 110 (356)
T cd06451 31 LALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWGEA 110 (356)
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCCCC
Confidence 356889999999999973 3 4456778999999999999999999988777765 34556677888777653
Q ss_pred CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCC
Q 011567 223 NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGV 302 (483)
Q Consensus 223 ~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v 302 (483)
.|.+++++.+++. ++++|++.++.+++|.+.|+++|.++|++||+++++|++|++|... +.+
T Consensus 111 ~~~~~l~~~i~~~---------~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~---------~~~ 172 (356)
T cd06451 111 VSPEEIAEALEQH---------DIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEP---------FRM 172 (356)
T ss_pred CCHHHHHHHHhcc---------CCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCcc---------ccc
Confidence 3677887777531 2567766677788999999999999999999999999999865321 122
Q ss_pred CCCceeEEEccccccccCC-C-ceeeccHHHHHHHHh--cCCce---------------eecCCCcHHHHHHHHHHHHHH
Q 011567 303 PVDKIDIVTAAMGHALATE-G-GFCTGSARVVDHQRL--SSSGY---------------VFSASLPPYLASAAITAIDVL 363 (483)
Q Consensus 303 ~~~~~Di~~~s~~K~lg~~-G-G~i~~~~~~~~~~~~--~~~~~---------------~fs~~~~p~~~aaa~~al~~l 363 (483)
...++|++++|++|+++.+ | |+++.+++.++.+.. ...++ .++.+.++...+++.++++.+
T Consensus 173 ~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l 252 (356)
T cd06451 173 DEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLI 252 (356)
T ss_pred cccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHH
Confidence 2234588899999999843 4 899888888877653 11111 123344555566677788776
Q ss_pred hcC--cHHHHHHHHHHHHHHHhhccCCCceeecCC--CCCEE-EEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeec
Q 011567 364 EEN--PDLITKLKKNTAILRTGLSDIHGLSIASNP--ESPIV-FLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSK 438 (483)
Q Consensus 364 ~~~--~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~--~~~i~-~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~ 438 (483)
.+. +.+.++.+++.+++++.|.++ |+++..++ .++.+ ++.++... ...++++.+.++.||.+.+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~L~~~~gI~~~~g~ 323 (356)
T cd06451 253 LEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAVLVPEGV--------DGDEVVRRLMKRYNIEIAGGL 323 (356)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceEEEECCCCC--------CHHHHHHHHHHhCCEEEeccc
Confidence 543 457788889999999999886 87775432 23333 44443211 133567765443399998754
Q ss_pred ccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 439 RSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 439 ~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
.+. .+..||++++..+|++|+++++++|++++
T Consensus 324 ~~~-----~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 324 GPT-----AGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred ccc-----cCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 322 12459999999999999999999999875
No 141
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.1e-23 Score=214.51 Aligned_cols=340 Identities=16% Similarity=0.178 Sum_probs=223.6
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----CCC-----CEEEeccc
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GTP-----DSILYSYG 178 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g~e-----~~i~~~sG 178 (483)
|++++||+++.. .+...|.+.+++.+.+...... +.. ..|. .+|++.+|+++ |.. +.|+.++|
T Consensus 43 ~~~~i~L~~g~p-~~~~~~~~~~~l~~~~~~~~~~--~Y~-~~G~----~~lr~aia~~~~~~~g~~~~~~~~~I~it~G 114 (410)
T PRK06290 43 DMELIDMGVGEP-DEMADESVVEVLCEEAKKPENR--GYA-DNGI----QEFKEAAARYMEKVFGVKDIDPVTEVIHSIG 114 (410)
T ss_pred CCCeEEcCCCCC-CCCCCHHHHHHHHHHHhCCCCC--CCC-CCCc----HHHHHHHHHHHHHHcCCCcCCCcceEEEccC
Confidence 567899999843 2334577888887766432111 111 1233 45555565553 432 35666665
Q ss_pred -HHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEE
Q 011567 179 -LSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIV 250 (483)
Q Consensus 179 -~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv 250 (483)
.+++..++.+++++||.|+++.+.|..+...++..|.+++.++.. |++++++.+.. ++++|+
T Consensus 115 s~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~----------~~k~i~ 184 (410)
T PRK06290 115 SKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKE----------KAKLLY 184 (410)
T ss_pred HHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcc----------cceEEE
Confidence 478888899999999999999999988888888889998887643 44555544422 256777
Q ss_pred EecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ce
Q 011567 251 VEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GF 324 (483)
Q Consensus 251 ~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~ 324 (483)
+..++|++|.+.+ +++|+++|++||++||+||+|....++.....+.+..+. .+.+|+++||||++|.+| ||
T Consensus 185 l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~--~~~~I~i~SfSK~~g~~GlRiG~ 262 (410)
T PRK06290 185 LNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGA--KEVGVEIHSLSKAYNMTGWRLAF 262 (410)
T ss_pred EECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCc--cccEEEEeechhhcCCchhheEe
Confidence 6666899999999 688999999999999999999876553211122221111 245799999999998778 99
Q ss_pred eeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEE
Q 011567 325 CTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLI 404 (483)
Q Consensus 325 i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~ 404 (483)
+++++++++.++.....+..+. +.....++.++++.-+..++.+++++++.+.+.+.|++. |+.+..+..+.++++.
T Consensus 263 ii~~~~l~~~l~~~~~~~~~~~--~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~f~l~v~ 339 (410)
T PRK06290 263 VVGNELIVKAFATVKDNNDSGQ--FIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-GFKAEMPGGTFYLYVK 339 (410)
T ss_pred EEeCHHHHHHHHHHHhccccCC--cHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCeeeEEEEE
Confidence 9999999988865543332222 233334444455321112346777888889999999886 7776644455566677
Q ss_pred ecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEcc-CCCCHHHHHHHHHHHHHHHHHH
Q 011567 405 LEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVS-AAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 405 l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~-~~~t~edi~~~~~~l~~~~~~~ 478 (483)
+++..... .......++++.+++++++.+.+.... ...+||++. ...++++.++++++|++.+..+
T Consensus 340 lp~~~~~~-~~~~~~~~~~~~Ll~~~~v~~~p~~~~-------~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 340 APKGTKSG-IKFENAEEFSQYLIKEKLISTVPWDDA-------GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred CCCccccC-CCCCCHHHHHHHHHHhCCEEEECCccc-------cCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 75321000 000113367888777766665543211 134999885 4568999999999999988765
No 142
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.94 E-value=7.3e-24 Score=214.17 Aligned_cols=319 Identities=18% Similarity=0.194 Sum_probs=221.8
Q ss_pred CChHHHHHHHHHHHhcCCCCCC-C-CCcccChHHHHHHHHHHHhhhCCC---CEEEecccHHHHHhhhhhhcc---CCcE
Q 011567 124 GHEKLLESCTSALEKYGVGSCG-P-RGFYGTIDVHLDCEARIAKFLGTP---DSILYSYGLSTMFSAIPCFCK---KGDL 195 (483)
Q Consensus 124 ~~p~i~~a~~~~l~~~g~g~~~-~-~~~~g~~~~~~~l~~~La~~~g~e---~~i~~~sG~~a~~~ai~~~~~---~gdi 195 (483)
..+.+.++..+.++.+...++. . .......+...++++.+++++|.+ +.++.+++++++..++.++.. +||.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~ 90 (373)
T cd06453 11 KPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDE 90 (373)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCE
Confidence 4578889988888765332211 1 111123456788999999999976 455567778899999988876 8999
Q ss_pred EEEcCCchhHHHh----HhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHH
Q 011567 196 IVADEGVHWGIQN----GLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDE 266 (483)
Q Consensus 196 I~~~~~~h~s~~~----g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~ 266 (483)
|++....|.+... ..+..|.+++.++.+ |++++++.+.+ .+++|++..+.+++|.+.|+++
T Consensus 91 vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~----------~~~~v~~~~~~~~tG~~~~~~~ 160 (373)
T cd06453 91 IVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTE----------RTKLVAVTHVSNVLGTINPVKE 160 (373)
T ss_pred EEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcC----------CceEEEEeCcccccCCcCCHHH
Confidence 9999999988533 233567788777654 67777776643 2678888888889999999999
Q ss_pred HHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccHHHHHHHHhcCCc----
Q 011567 267 LIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSSG---- 341 (483)
Q Consensus 267 l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~~~~~~~~~~~~~---- 341 (483)
|.++|++||+++++|++++.|.+.. .+....+|++++|++|++++.| |++++++++++.++....+
T Consensus 161 i~~~~~~~~~~li~D~a~~~~~~~~---------~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~~~~~~~~~~~~g~~~~ 231 (373)
T cd06453 161 IGEIAHEAGVPVLVDGAQSAGHMPV---------DVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPYGGGGEMI 231 (373)
T ss_pred HHHHHHHcCCEEEEEhhhhcCceee---------eccccCCCEEEeccccccCCCCcEEEEEchHHhhcCCCeecCCCcc
Confidence 9999999999999999998664321 1111245899999999998655 8888888887765432111
Q ss_pred --------------eeecC-CCcHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhccCCCceeecC--CCCCEEE
Q 011567 342 --------------YVFSA-SLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASN--PESPIVF 402 (483)
Q Consensus 342 --------------~~fs~-~~~p~~~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~~~~~~i~~~--~~~~i~~ 402 (483)
..|.. +.+...+.+..++++.+.+. +++.++.+++.+++++.|++++++++..+ ..++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 311 (373)
T cd06453 232 EEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVS 311 (373)
T ss_pred ccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEE
Confidence 12322 33444444555677777643 45778888899999999998878887643 2466777
Q ss_pred EEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccc---cCCCCCceEEEccCCCCHHHHHHHHHHH
Q 011567 403 LILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLD---KCRLPVGIRLFVSAAHSEADLVKACESL 471 (483)
Q Consensus 403 l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~---~~~~~~~lRi~~~~~~t~edi~~~~~~l 471 (483)
+.++.. ...++.+. |.++||.+..+..+..+ ....+..||++++..+|++|+|+++++|
T Consensus 312 ~~~~~~---------~~~~i~~~-l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 312 FNLEGI---------HPHDVATI-LDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred EEECCc---------CHHHHHHH-HHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 776421 12356665 44579998765432110 0111345999999999999999998864
No 143
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.94 E-value=7e-24 Score=205.62 Aligned_cols=333 Identities=18% Similarity=0.185 Sum_probs=238.8
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHHHhc-CCCCCCCCCcccCh--HHHHHHHHHHHhhhCCC--CEEEecccHHHHHhh
Q 011567 111 VVNFASANYLGLIGHEKLLESCTSALEKY-GVGSCGPRGFYGTI--DVHLDCEARIAKFLGTP--DSILYSYGLSTMFSA 185 (483)
Q Consensus 111 ~id~~s~~~lG~~~~p~i~~a~~~~l~~~-g~g~~~~~~~~g~~--~~~~~l~~~La~~~g~e--~~i~~~sG~~a~~~a 185 (483)
|+|.+...+ .+|++.+++...+..+ |.. .+-..+|.. ...++.++++|+.+|.+ +.+|+++|++++..+
T Consensus 4 YlD~~ATTp----~~~~v~~~m~~~~~~~fgNP--sS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNla 77 (386)
T COG1104 4 YLDNAATTP----VDPEVLEAMLPYLTEVFGNP--SSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLA 77 (386)
T ss_pred cccccccCC----CCHHHHHHHHHHHHhhcCCc--cchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHH
Confidence 666666543 5689999999998875 443 334455643 47788999999999964 455557888999988
Q ss_pred hhh--hc----cCCcEEEEcCCchhHHHhHhhhc---CCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEE
Q 011567 186 IPC--FC----KKGDLIVADEGVHWGIQNGLYLS---RSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVV 251 (483)
Q Consensus 186 i~~--~~----~~gdiI~~~~~~h~s~~~g~~~s---~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~ 251 (483)
|+. .. +++..|++....|.++.+.++.. |.++.+.+.+ |+++|++.|+. .+.+|.+
T Consensus 78 I~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~----------~T~LVSi 147 (386)
T COG1104 78 IKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRP----------DTILVSI 147 (386)
T ss_pred HHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCC----------CceEEEE
Confidence 876 32 36789999999999999888755 7777777655 78888887764 3789999
Q ss_pred ecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccHH
Q 011567 252 EAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSAR 330 (483)
Q Consensus 252 e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~~ 330 (483)
-.++|.+|.+.|+++|.++|+++++++++|.+|++|.+. .++....+|+++.|-+|..|+.| |++..++.
T Consensus 148 m~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkip---------i~~~~~~vD~ls~SaHK~~GpkGiGaLyv~~~ 218 (386)
T COG1104 148 MHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIP---------IDLEELGVDLLSFSAHKFGGPKGIGALYVRPG 218 (386)
T ss_pred EecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCcee---------ccccccCcceEEeehhhccCCCceEEEEECCC
Confidence 999999999999999999999999999999999988654 23332347999999999999777 76655443
Q ss_pred HH-HHHHhcCCce---eecCCCcHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHhhccC-CCceeecCC--C-CCEE
Q 011567 331 VV-DHQRLSSSGY---VFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDI-HGLSIASNP--E-SPIV 401 (483)
Q Consensus 331 ~~-~~~~~~~~~~---~fs~~~~p~~~aaa~~al~~l~-~~~~~~~~l~~~~~~l~~~L~~~-~~~~i~~~~--~-~~i~ 401 (483)
+. +.+.. +.++ .-+++.|....++.-+|+++.. +.+....++..+.++|.+.|.+. +++.+.+.. . ..++
T Consensus 219 ~~~~p~i~-GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~ 297 (386)
T COG1104 219 VRLEPLIH-GGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNIL 297 (386)
T ss_pred CccCceec-cCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeE
Confidence 32 22211 1121 1233455555555555555543 33567888899999999999865 677776542 2 3467
Q ss_pred EEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCC--------------CCCceEEEccCCCCHHHHHHH
Q 011567 402 FLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCR--------------LPVGIRLFVSAAHSEADLVKA 467 (483)
Q Consensus 402 ~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~--------------~~~~lRi~~~~~~t~edi~~~ 467 (483)
.+.++.-.+ +.+. ..|+..||.++.+..++-.... ...+|||+++...|++|++++
T Consensus 298 ~~~f~gv~g---------E~ll-~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~ 367 (386)
T COG1104 298 NFSFPGVEG---------ESLL-LALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAA 367 (386)
T ss_pred EEEeCCCcH---------HHHH-HhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHH
Confidence 777754321 1233 3577779999877654432111 123599999999999999999
Q ss_pred HHHHHHHHHHHH
Q 011567 468 CESLKRISAVVL 479 (483)
Q Consensus 468 ~~~l~~~~~~~~ 479 (483)
+++++++++++.
T Consensus 368 ~~~l~~~i~~lr 379 (386)
T COG1104 368 AEALKEIIKRLR 379 (386)
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 144
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=7.3e-24 Score=213.02 Aligned_cols=318 Identities=17% Similarity=0.190 Sum_probs=222.6
Q ss_pred eeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEe-cccHHHHHhh
Q 011567 109 KEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILY-SYGLSTMFSA 185 (483)
Q Consensus 109 ~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~-~sG~~a~~~a 185 (483)
++++||+++ +.+| .+|.+.+++.+.++.... .......++++.+|++++.+ +.+++ +++++++..+
T Consensus 29 ~~~i~l~~n~~~~~--~~~~v~~a~~~~~~~~~~---------~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~ 97 (359)
T PRK03158 29 EKIVKLASNENPYG--PSPKVKEAIAAHLDELAL---------YPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMI 97 (359)
T ss_pred CceEEecCCCCCCC--CCHHHHHHHHHHHHHhhc---------CCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHH
Confidence 378999998 4554 468899999888775321 11123578999999999853 44555 5556888888
Q ss_pred hhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCc
Q 011567 186 IPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQI 261 (483)
Q Consensus 186 i~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i 261 (483)
+.+++++||.|+++.+++..+...+...|.++..++.. |++++++.+.. +++++++..+++++|.+
T Consensus 98 ~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~~~~----------~~~~v~i~~p~NPtG~~ 167 (359)
T PRK03158 98 SRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLKDGGHDLEAMLKAIDE----------QTKIVWICNPNNPTGTY 167 (359)
T ss_pred HHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecCCCCcCHHHHHHhcCC----------CCCEEEEeCCCCCCCCC
Confidence 88999999999999999888877788888888777643 45555544421 25566667778999999
Q ss_pred cChHHHHHHHHH--cCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHHH
Q 011567 262 APLDELIRLKEK--YRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQR 336 (483)
Q Consensus 262 ~~L~~l~~l~~k--~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~ 336 (483)
.|.+++.++++. +|+++|+||+|..+..+..........+ ..+..++++||||++|..| ||+++++++++.++
T Consensus 168 ~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~--~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~ 245 (359)
T PRK03158 168 VNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLE--KYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLN 245 (359)
T ss_pred CCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHH--hcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHH
Confidence 999998888887 5999999999986654321111111111 1234788899999999777 99999999998876
Q ss_pred hcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhH
Q 011567 337 LSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDL 416 (483)
Q Consensus 337 ~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~ 416 (483)
..... + +.+++...++.++++.-...++..+.++++.+.+.+.|++. ++.+. ++.++++++.+.. +
T Consensus 246 ~~~~~--~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~g~~i~~~~~~-------~- 311 (359)
T PRK03158 246 IARPP--F--NTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-GLFYY-PSQTNFIFVDTGR-------D- 311 (359)
T ss_pred HhcCC--C--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeC-CCcCcEEEEECCC-------C-
Confidence 54332 2 34666767676666422112235556677777788888776 77665 3467777777631 1
Q ss_pred HHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 417 QLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 417 ~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
..++++.+++ +||.+.++..... ++.+||++. +.+|+++++++|+++
T Consensus 312 --~~~~~~~l~~-~gv~v~~g~~f~~-----~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 312 --ANELFEALLK-KGYIVRSGAALGF-----PTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred --HHHHHHHHHH-CCeEEeeCCCCCC-----CCeEEEecC---CHHHHHHHHHHHHHh
Confidence 2356776554 6999998654321 345999985 899999999999875
No 145
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.94 E-value=9.4e-24 Score=210.91 Aligned_cols=330 Identities=16% Similarity=0.150 Sum_probs=219.2
Q ss_pred EeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC--------CCCEEEecccHHHHHh
Q 011567 113 NFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG--------TPDSILYSYGLSTMFS 184 (483)
Q Consensus 113 d~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g--------~e~~i~~~sG~~a~~~ 184 (483)
|++.+++ .+..+|.+.++..+ ..++.+.... ++.+-..++++.++++++ .++.++.++|++++..
T Consensus 2 ~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~ 74 (350)
T cd00609 2 DLSIGEP-DFPPPPEVLEALAA--AALRAGLLGY----YPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSL 74 (350)
T ss_pred CCCCCCC-CCCCCHHHHHHHHH--HhhccCCCCC----CCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHH
Confidence 5555544 44466777777665 3333333222 223334555555555554 3356666888899999
Q ss_pred hhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHH---HHHHHHhhhhhhhccCccEEEEEecccCCCCCc
Q 011567 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSL---RNTLERVTADNKRAKKLRRYIVVEAVYQNSGQI 261 (483)
Q Consensus 185 ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~L---e~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i 261 (483)
++.++.++||.|+++.+.|.++...++..+.+++.++.++...+ ++.++.... ..+++|++++.++++|.+
T Consensus 75 ~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~------~~~~~v~i~~~~~~tG~~ 148 (350)
T cd00609 75 LLRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKT------PKTKLLYLNNPNNPTGAV 148 (350)
T ss_pred HHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcC------ccceEEEEECCCCCCCcc
Confidence 99999999999999999999999999999988887776532111 122222111 136788888899999999
Q ss_pred cChH---HHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccH-HHHHH
Q 011567 262 APLD---ELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSA-RVVDH 334 (483)
Q Consensus 262 ~~L~---~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~-~~~~~ 334 (483)
.|++ +|+++|++||+++|+||+|+.+..+..+.. ........+.|++++|++|+++..| |++++++ ++.+.
T Consensus 149 ~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~ 226 (350)
T cd00609 149 LSEEELEELAELAKKHGILIISDEAYAELVYDGEPPP--ALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLER 226 (350)
T ss_pred cCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccc--cccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHH
Confidence 9854 555899999999999999987765533322 1122223445899999999997433 8888888 78888
Q ss_pred HHhcCCceeecCCCcHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCch
Q 011567 335 QRLSSSGYVFSASLPPYLASAAITAIDVL-EENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMK 413 (483)
Q Consensus 335 ~~~~~~~~~fs~~~~p~~~aaa~~al~~l-~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~ 413 (483)
++....... ...++..+.++..+++.. +..+...++++++.+++.+.|.+.....+.....+.++++.+...
T Consensus 227 ~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~----- 299 (350)
T cd00609 227 LKKLLPYTT--SGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEG----- 299 (350)
T ss_pred HHHHHHhcc--cCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCC-----
Confidence 776543322 234566666666677655 333567888899999999999887443323334555666666432
Q ss_pred hhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHH
Q 011567 414 NDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 414 ~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
...+...+++++.||.+.....+.. ..+..+|++++.. ++|+++++++|++
T Consensus 300 ----~~~~~~~~~l~~~gi~i~~~~~~~~---~~~~~iRi~~~~~--~~~i~~~~~al~~ 350 (350)
T cd00609 300 ----DDEEFLERLLLEAGVVVRPGSAFGE---GGEGFVRLSFATP--EEELEEALERLAE 350 (350)
T ss_pred ----ChHHHHHHHHHhCCEEEeccccccc---CCCCeEEEEeeCC--HHHHHHHHHHhhC
Confidence 0112344567777999987644321 1134599999876 9999999998863
No 146
>PRK02948 cysteine desulfurase; Provisional
Probab=99.94 E-value=7.2e-24 Score=214.80 Aligned_cols=334 Identities=15% Similarity=0.147 Sum_probs=223.8
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcc-cChHHHHHHHHHHHhhhCC-CCEEEe-cccHHHHHhhhh
Q 011567 111 VVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFY-GTIDVHLDCEARIAKFLGT-PDSILY-SYGLSTMFSAIP 187 (483)
Q Consensus 111 ~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~-g~~~~~~~l~~~La~~~g~-e~~i~~-~sG~~a~~~ai~ 187 (483)
|+|-++. +. .++.+.+++.+.++.+..+..+..... ...+...++++.+++++|. ++.+++ +++++++..++.
T Consensus 3 yld~a~~---~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~ 78 (381)
T PRK02948 3 YLDYAAT---TP-MSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQ 78 (381)
T ss_pred eccCCCC---CC-CCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHH
Confidence 5555543 33 568899999988876543322211111 1235678999999999985 456666 555788888777
Q ss_pred hhc----cCCcEEEEcCCchhHHHhH---hhhcCCeEEEecC-----CCHHHHHHHHHHhhhhhhhccCccEEEEEeccc
Q 011567 188 CFC----KKGDLIVADEGVHWGIQNG---LYLSRSTVVYFKH-----NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVY 255 (483)
Q Consensus 188 ~~~----~~gdiI~~~~~~h~s~~~g---~~~s~~~v~~~~~-----~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~ 255 (483)
++. +++|.|+++...|.++... ++..|.++..++. .|+++|++.+++ .+++|++++++
T Consensus 79 ~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~----------~~~lv~~~~~~ 148 (381)
T PRK02948 79 SLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITP----------DTVLASIQHAN 148 (381)
T ss_pred HHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCC----------CCEEEEEECCc
Confidence 664 5789999999999876654 3445777766653 367777766532 26799999999
Q ss_pred CCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccHHH-HH
Q 011567 256 QNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARV-VD 333 (483)
Q Consensus 256 ~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~~~-~~ 333 (483)
+++|.+.|+++|.++|++||+++++|+++++|..+- ++...++|+++.|++|.+|+.| |+++.++++ ..
T Consensus 149 n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~---------~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~ 219 (381)
T PRK02948 149 SEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPI---------DVFEMGIDSLSVSAHKIYGPKGVGAVYINPQVRWK 219 (381)
T ss_pred CCcEeehhHHHHHHHHHHcCCEEEEEChhhcccccc---------CcccCCCCEEEecHHhcCCCCcEEEEEEcCCCCCC
Confidence 999999999999999999999999999998765431 2222346999999999999776 777766654 11
Q ss_pred HHHh---cCCceeecCCCcHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHhhccCCCceeecCC-C----CCEEEEE
Q 011567 334 HQRL---SSSGYVFSASLPPYLASAAITAIDVL-EENPDLITKLKKNTAILRTGLSDIHGLSIASNP-E----SPIVFLI 404 (483)
Q Consensus 334 ~~~~---~~~~~~fs~~~~p~~~aaa~~al~~l-~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~-~----~~i~~l~ 404 (483)
.... ...++.. ++.|....+++.++++.+ +..++.+++++++.+++++.|+++ ++++.... . ..++.+.
T Consensus 220 ~~~~~~~~~~~~~~-~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~~~i~~~~ 297 (381)
T PRK02948 220 PVFPGTTHEKGFRP-GTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCLPHIIGVT 297 (381)
T ss_pred CcccCCCCCCCcCC-CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCcCCEEEEE
Confidence 1110 0111222 245666667777777765 333567899999999999999887 65543221 1 1244444
Q ss_pred ecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc------------cc--CCCCCceEEEccCCCCHHHHHHHHHH
Q 011567 405 LEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML------------DK--CRLPVGIRLFVSAAHSEADLVKACES 470 (483)
Q Consensus 405 l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~------------~~--~~~~~~lRi~~~~~~t~edi~~~~~~ 470 (483)
+... + ..++... |.++||.++.+..+.. .. ......+|++++..+|++|+++++++
T Consensus 298 ~~~~------~---~~~~~~~-l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~ 367 (381)
T PRK02948 298 IKGI------E---GQYTMLE-CNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHA 367 (381)
T ss_pred eCCC------C---HHHHHHh-cccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHH
Confidence 4211 1 1234554 4567999986542110 00 00024599999999999999999999
Q ss_pred HHHHHHHHH
Q 011567 471 LKRISAVVL 479 (483)
Q Consensus 471 l~~~~~~~~ 479 (483)
|+++++++-
T Consensus 368 l~~~~~~~~ 376 (381)
T PRK02948 368 LETIGNQFY 376 (381)
T ss_pred HHHHHHHHh
Confidence 999887654
No 147
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.94 E-value=4.8e-24 Score=213.29 Aligned_cols=317 Identities=17% Similarity=0.196 Sum_probs=222.6
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEe-cccHHHHHhh
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILY-SYGLSTMFSA 185 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~-~sG~~a~~~a 185 (483)
+.++|||+++++ ++..+|++.+++.+++... . .|+... ..++++.+|++++.+ +.+++ +++++++..+
T Consensus 18 ~~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~-~-------~y~~~~-~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~ 87 (346)
T TIGR01141 18 GKEVIKLNSNEN-PFGPPPKAKEALRAEADKL-H-------RYPDPD-PAELKQALADYYGVDPEQILLGNGSDEIIELL 87 (346)
T ss_pred CCceEEccCCCC-CCCCCHHHHHHHHHhHHHh-h-------cCCCCC-HHHHHHHHHHHhCcChHHEEEcCCHHHHHHHH
Confidence 357999999865 5556789999999876532 1 122222 268999999999853 44445 5556788888
Q ss_pred hhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC-----CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCC
Q 011567 186 IPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-----NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQ 260 (483)
Q Consensus 186 i~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~-----~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~ 260 (483)
+.+++++||.|+++.+.|......+...|.+++.++. .|++.+++.+ .. .+++|++..+++++|.
T Consensus 88 ~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~---~~-------~~~~v~l~~p~NptG~ 157 (346)
T TIGR01141 88 IRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAI---DD-------KPKLVFLCSPNNPTGN 157 (346)
T ss_pred HHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhc---CC-------CCCEEEEeCCCCCCCC
Confidence 8889999999999998887766667778888887764 2556666543 11 2667777788899999
Q ss_pred ccChHHHHHHHHHc--CcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHH
Q 011567 261 IAPLDELIRLKEKY--RFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQ 335 (483)
Q Consensus 261 i~~L~~l~~l~~k~--~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~ 335 (483)
+.|++++.++|+.+ ++++|+||+|+..... +. ........ +.+++++|++|++|..| ||+++++++.+.+
T Consensus 158 ~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~--~~-~~~~~~~~--~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~ 232 (346)
T TIGR01141 158 LLSRSDIEAVLERTPEDALVVVDEAYGEFSGE--PS-TLPLLAEY--PNLIVLRTLSKAFGLAGLRIGYAIANAEIIDAL 232 (346)
T ss_pred CCCHHHHHHHHHhCCCCcEEEEECchhhhcCC--cc-HHHHHhhC--CCEEEEehhhHhhhchhhhceeeecCHHHHHHH
Confidence 99999999999987 9999999999743211 11 11111111 22688899999997666 9999999998888
Q ss_pred HhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 011567 336 RLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 415 (483)
Q Consensus 336 ~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~ 415 (483)
+..... + +.++....++.+.++......+..++++++.+.+++.|++++|+.+. ++.++++++.+..
T Consensus 233 ~~~~~~--~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~-------- 299 (346)
T TIGR01141 233 NKVRAP--F--NLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFPR-------- 299 (346)
T ss_pred HhccCC--C--CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecCC--------
Confidence 754332 2 23566666666665443222356788888999999999887788765 3467788887642
Q ss_pred HHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHH
Q 011567 416 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 472 (483)
Q Consensus 416 ~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 472 (483)
..+++.+.++ ++||.+.+...... .+..+|++++ |++|+++++++|+
T Consensus 300 --~~~~~~~~L~-~~gI~v~~g~~f~~----~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 300 --DADALFEALL-EKGIIVRDLNSYPG----LPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred --CHHHHHHHHH-HCCeEEEeCCCcCC----CCCeEEEecC---CHHHHHHHHHHhC
Confidence 1235676655 46999998754211 1345999975 8999999998874
No 148
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=6.7e-24 Score=213.49 Aligned_cols=318 Identities=19% Similarity=0.211 Sum_probs=215.9
Q ss_pred ECCeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEe-cccH-HH
Q 011567 106 ISGKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILY-SYGL-ST 181 (483)
Q Consensus 106 ~~G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~-~sG~-~a 181 (483)
.++++++||+++ |++|. +|.+++++.+.+.... .|+. +...++++.+|+++|.+ +.+++ ++|+ ++
T Consensus 31 ~~~~~~i~l~~~~~~~~~--~~~~~~~~~~~~~~~~--------~y~~-~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~ 99 (361)
T PRK00950 31 IDPESIIKLGSNENPLGP--SPKAVEAIEKELSKIH--------RYPE-PDAPELREALSKYTGVPVENIIVGGDGMDEV 99 (361)
T ss_pred CCccceEEccCCCCCCCC--CHHHHHHHHHHHHhhc--------CCCC-CCHHHHHHHHHHHhCCCHHHEEEeCCCHHHH
Confidence 356789999998 67774 5889999888776531 1221 12488999999999964 34444 6675 56
Q ss_pred HHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC-C----CHHHHHHHHHHhhhhhhhccCccEEEEEecccC
Q 011567 182 MFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-N----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQ 256 (483)
Q Consensus 182 ~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~-~----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~ 256 (483)
+..+++++.++||.|+++.+.+..+...++..|.+++.++. + |++++++.+.. +++++++..+++
T Consensus 100 i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~----------~~~~v~~~~p~n 169 (361)
T PRK00950 100 IDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAITE----------KTKVIFLCTPNN 169 (361)
T ss_pred HHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhcc----------CCCEEEEeCCCC
Confidence 77888888899999999888887777778888888887753 2 45566554422 255666667889
Q ss_pred CCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHH
Q 011567 257 NSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVD 333 (483)
Q Consensus 257 ~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~ 333 (483)
++|.+.|.+++.++|+++|+++|+||+|+... +.....+... .+..++++||||++|..| ||+++++++++
T Consensus 170 ptG~~~~~~~l~~l~~~~~~~li~De~y~~~~-~~~~~~~~~~-----~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~ 243 (361)
T PRK00950 170 PTGNLIPEEDIRKILESTDALVFVDEAYVEFA-EYDYTPLALE-----YDNLIIGRTFSKVFGLAGLRIGYGFVPEWLID 243 (361)
T ss_pred CCCCCcCHHHHHHHHHHCCcEEEEECchhhhC-ccchHHHHHh-----cCCEEEEEeehHhhcCchhhcchhcCCHHHHH
Confidence 99999999999999999999999999997543 2211111111 122578899999999777 99999999988
Q ss_pred HHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCch
Q 011567 334 HQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMK 413 (483)
Q Consensus 334 ~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~ 413 (483)
.++.....+ +.++...+++.++++..+...+..++++++.+++.+.|. +.+. ++.++++++.+...
T Consensus 244 ~~~~~~~~~----~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~~~~~i~~~~~~~----- 309 (361)
T PRK00950 244 YYMRAKTPF----SLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVY-PSEANFVLVDVTPM----- 309 (361)
T ss_pred HHHHhcCCC----CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeEC-CCcceEEEEECCCC-----
Confidence 876654333 235555555655654211112344555555555655554 4443 34677888877211
Q ss_pred hhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 414 NDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 414 ~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
...++++.+++ +||.+.+...... ..+..||++++ +.+|+++++++|++++
T Consensus 310 ----~~~~~~~~l~~-~gv~v~~~~~f~~---~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 310 ----TAKEFCEELLK-RGVIVRDCTSFRG---LGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred ----CHHHHHHHHHH-CCEEEeeCCccCC---CCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 12356776655 5999987542210 01245999985 7899999999998865
No 149
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.93 E-value=2.2e-23 Score=212.40 Aligned_cols=335 Identities=13% Similarity=0.143 Sum_probs=223.7
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC---CC-CEEEe-cccHHH
Q 011567 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG---TP-DSILY-SYGLST 181 (483)
Q Consensus 107 ~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g---~e-~~i~~-~sG~~a 181 (483)
.|++++||+.+++ .+...+.+.+++.+.+.+... .+.. ..|..++...+++.+.+..| .+ +.++. +++.++
T Consensus 30 ~~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~--~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 105 (399)
T PRK07681 30 AGHKMIDLSIGNP-DMPPADFVREEMVHTANQKES--YGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDG 105 (399)
T ss_pred cCCCeEEeCCCCC-CCCCCHHHHHHHHHHHhcccc--CCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHH
Confidence 3567899998854 233567888888887764211 1100 12333334444444433333 22 44554 555688
Q ss_pred HHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEEecc
Q 011567 182 MFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVVEAV 254 (483)
Q Consensus 182 ~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v 254 (483)
+..++.+++++||.|+++.+.|..+...+...|.+++.++.+ |++++++.+. . ++++|++..+
T Consensus 106 l~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~---~-------~~k~v~l~~P 175 (399)
T PRK07681 106 LVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA---D-------KAKMMILNFP 175 (399)
T ss_pred HHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc---c-------cceEEEEeCC
Confidence 888899999999999999999999888888999999888753 4455544442 1 2566777666
Q ss_pred cCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCC-CceeEEEccccccccCCC---ceeec
Q 011567 255 YQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPV-DKIDIVTAAMGHALATEG---GFCTG 327 (483)
Q Consensus 255 ~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~-~~~Di~~~s~~K~lg~~G---G~i~~ 327 (483)
+|++|.+.+ +++|+++|++||+++|+||+|+...+.. ........++. .+..|+++||||++|.+| ||+++
T Consensus 176 ~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~ 253 (399)
T PRK07681 176 GNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDG--NKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIG 253 (399)
T ss_pred CCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCC--CCCCChhhCCCCcccEEEEeecccccCCccceeEEEec
Confidence 889999998 7889999999999999999998765532 21111122221 234688899999998777 99999
Q ss_pred cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEec
Q 011567 328 SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILE 406 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~-~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~ 406 (483)
++++++.++.......++. +.....++.++++.-. ..++.++.++++.+.+.+.|++. |+.+..+..+.++++.++
T Consensus 254 ~~~l~~~~~~~~~~~~~~~--s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~~g~f~~~~l~ 330 (399)
T PRK07681 254 NEEIVRALTQFKSNTDYGV--FLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-GWNVDKPAGSMFVWAEIP 330 (399)
T ss_pred CHHHHHHHHHHHhhcccCC--CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeeEEEEECC
Confidence 9999988765433233333 3444444445553211 11345667788888899999886 777655556788888875
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHH
Q 011567 407 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
+.. ...+++..+++++||.+.++...... .++.+||++. .+++++++++++|++
T Consensus 331 ~~~--------~~~~~~~~l~~~~gv~v~pg~~f~~~---~~~~iRis~~--~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 331 KGW--------TSLSFAYALMDRANVVVTPGHAFGPH---GEGFVRIALV--QDEEVLQQAVENIRN 384 (399)
T ss_pred CCC--------CHHHHHHHHHHhCCEEEeCChhhCcC---CCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 321 12357777777679999887543210 1245999987 578999999999987
No 150
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.3e-23 Score=213.02 Aligned_cols=331 Identities=16% Similarity=0.221 Sum_probs=221.4
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----C----CCCEEEecccHHH
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G----TPDSILYSYGLST 181 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g----~e~~i~~~sG~~a 181 (483)
.++||..++. .+...+.+.+++.+.+...-. .|+...-..+|++.+|+++ | .++.++.+++.++
T Consensus 30 ~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~-------~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~a 101 (384)
T PRK06348 30 DIIDLSLGDP-DLITDESIINAAFEDAKKGHT-------RYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHG 101 (384)
T ss_pred CcEEcCCCCC-CCCCCHHHHHHHHHHHhcCCC-------CCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHH
Confidence 4688888743 243457777766655433111 1222222345666666665 3 2345555777788
Q ss_pred HHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC-------CCHHHHHHHHHHhhhhhhhccCccEEEEEecc
Q 011567 182 MFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTADNKRAKKLRRYIVVEAV 254 (483)
Q Consensus 182 ~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~-------~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v 254 (483)
+..++.+++++||.|+++.++|..+...+...|.+++.++. -|+++|++.++. ++++|++...
T Consensus 102 l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----------~~~~v~l~~p 171 (384)
T PRK06348 102 MYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITS----------KTKAIILNSP 171 (384)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCc----------CccEEEEeCC
Confidence 99999999999999999999999998888888888877652 256667665532 1455566677
Q ss_pred cCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeecc
Q 011567 255 YQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGS 328 (483)
Q Consensus 255 ~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~ 328 (483)
+|++|.+.+ +++|.++|++||+++|+||+|+...++.....+....+. .+..++++||||++|.+| ||++++
T Consensus 172 ~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~~~vi~~~SfSK~~~l~GlRiG~~v~~ 249 (384)
T PRK06348 172 NNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGM--PERTITFGSFSKDFAMTGWRIGYVIAP 249 (384)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCC--cCcEEEEecchhccCCccccceeeecC
Confidence 889999988 788999999999999999999876554311111121121 234688999999998666 999999
Q ss_pred HHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecC
Q 011567 329 ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEK 407 (483)
Q Consensus 329 ~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~ 407 (483)
+++++.++.......++. +++...++..+++..++ .+++++.++++.+.+.+.|++++++.+..+..+.++++.++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~~~ 327 (384)
T PRK06348 250 DYIIETAKIINEGICFSA--PTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIKK 327 (384)
T ss_pred HHHHHHHHHHHHhccCCC--CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeccc
Confidence 999888765443334443 55555555555543221 134667778888889999988767666544445566777742
Q ss_pred CCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 408 STGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 408 ~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
... + ..++++.++++.||.+.++...... .+..+|++++ .++++++++++.|+++
T Consensus 328 ~~~----~---~~~l~~~l~~~~gv~v~pg~~f~~~---~~~~iRi~~~--~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 328 TGL----S---SVEFCEKLLKEAHVLVIPGKAFGES---GEGYIRLACT--VGIEVLEEAFNRIEKM 382 (384)
T ss_pred CCC----C---HHHHHHHHHHhCCEEEcCchhhccC---CCCeEEEEec--CCHHHHHHHHHHHHhh
Confidence 110 1 2356777777779999987543211 1245999985 5889999999988754
No 151
>PRK10534 L-threonine aldolase; Provisional
Probab=99.93 E-value=1.4e-24 Score=216.03 Aligned_cols=320 Identities=15% Similarity=0.197 Sum_probs=212.5
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhc
Q 011567 111 VVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFC 190 (483)
Q Consensus 111 ~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~ 190 (483)
.|||+|++.-+ .+|.+.+++.+..... ..|+..+...+|++.|++++|.+..+++++|++++..++.+++
T Consensus 1 ~~~~~~~~~~~--p~~~~~~a~~~~~~~~--------~~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~ 70 (333)
T PRK10534 1 MIDLRSDTVTR--PSRAMLEAMMAAPVGD--------DVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHC 70 (333)
T ss_pred CcccccccCCC--CCHHHHHHHHhccCCC--------cccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhc
Confidence 47899985445 5688888876644321 1465567889999999999999999999999999998888889
Q ss_pred cCCcEEEEcCCchhHHHhH--hhhcC-CeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCcc
Q 011567 191 KKGDLIVADEGVHWGIQNG--LYLSR-STVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIA 262 (483)
Q Consensus 191 ~~gdiI~~~~~~h~s~~~g--~~~s~-~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~ 262 (483)
++||.|+++.++|.....+ ....+ .+++.++.+ |+++|++.+..... ....+++|+++.+. +|.+.
T Consensus 71 ~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~----~~~~~~lv~l~np~--~G~v~ 144 (333)
T PRK10534 71 ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDI----HFARTRLLSLENTH--NGKVL 144 (333)
T ss_pred CCCCeeEEechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCc----CcccceEEEEecCC--CCeec
Confidence 9999988888877543332 23333 455555432 56777665532100 00025677776433 59998
Q ss_pred Ch---HHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccC-CCceeeccHHHHHHHHhc
Q 011567 263 PL---DELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT-EGGFCTGSARVVDHQRLS 338 (483)
Q Consensus 263 ~L---~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~-~GG~i~~~~~~~~~~~~~ 338 (483)
|. ++|.++|++|++++++||+|.++..+..+... ..+. ...|.++.|+||++|. .|||+++++++++.++..
T Consensus 145 ~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~---~~~~-~~~~~~~~s~SK~~~~~~G~~~~~~~~~i~~~~~~ 220 (333)
T PRK10534 145 PREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCEL---KEIT-QYCDSFTICLSKGLGTPVGSLLVGNRDYIKRARRW 220 (333)
T ss_pred CHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCH---HHHH-hcCCEEEEEeEcCCCCcccceEEcCHHHHHHHHHH
Confidence 85 55678899999999999998754321111111 1111 1124445589999985 466899999998887654
Q ss_pred CCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHH
Q 011567 339 SSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQL 418 (483)
Q Consensus 339 ~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~ 418 (483)
...+.++.+.+..+++++.++++.. .+.+++..++++++.+.|+++ |+++..+ .+++++++++.. .
T Consensus 221 ~~~~~~~~~~~~~~~a~~~~~l~~~---~~~~~~~~~~r~~l~~~L~~~-g~~~~~~-~~nfv~~~~~~~---------~ 286 (333)
T PRK10534 221 RKMTGGGMRQAGILAAAGLYALKHN---VARLQEDHDNAAWLAEQLREA-GADVMRQ-DTNMLFVRVGEE---------Q 286 (333)
T ss_pred HHHhCCchhhHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHhC-CCccCCC-CceEEEEECCch---------h
Confidence 3222222223345555566666532 234555666778999999986 8877643 788888887420 1
Q ss_pred HHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 419 LEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 419 ~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
..++.+ .|+++||++++.. .+|++.+..+|++++++++++|++++.
T Consensus 287 ~~~~~~-~l~~~gi~v~~~~-----------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 287 AAALGE-YMRERNVLINASP-----------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred HHHHHH-HHHHcCeeecCCc-----------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 234554 5666799997642 278888777899999999999987653
No 152
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.93 E-value=7.6e-24 Score=215.27 Aligned_cols=332 Identities=15% Similarity=0.207 Sum_probs=224.8
Q ss_pred eEEEeecCC-CCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----CC----CCEEEecccHH
Q 011567 110 EVVNFASAN-YLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----PDSILYSYGLS 180 (483)
Q Consensus 110 ~~id~~s~~-~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g~----e~~i~~~sG~~ 180 (483)
.++||..+. .++ .++.+.+++.+.+...-.+ |+...-..+|++.+|+++ |. ++.++.+++++
T Consensus 34 ~~i~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~-------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 104 (391)
T PRK08361 34 NVISLGIGEPDFD--TPKNIKEAAKRALDEGWTH-------YTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYE 104 (391)
T ss_pred CeEEcCCCCCCCC--CCHHHHHHHHHHHhcCCCC-------CCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHH
Confidence 578988874 333 3578888888877642111 211122345666666664 42 35566677788
Q ss_pred HHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEEec
Q 011567 181 TMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVVEA 253 (483)
Q Consensus 181 a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~ 253 (483)
++..++.+++++||.|+++.+.|..+...+...|.+++.++.+ |++++++.++. .++++++..
T Consensus 105 al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~----------~~~~v~i~~ 174 (391)
T PRK08361 105 ATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITK----------RTRMIVINY 174 (391)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc----------ccEEEEEeC
Confidence 9999999999999999999999999888888889988887652 56666665542 255666777
Q ss_pred ccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeec
Q 011567 254 VYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTG 327 (483)
Q Consensus 254 v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~ 327 (483)
+++++|.+.| +++|+++|++|++++|+||+|+.+.+.. .......... .+.+++++|+||++|..| ||+++
T Consensus 175 p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~-~~~~i~~~s~SK~~~~~GlRiG~~~~ 251 (391)
T PRK08361 175 PNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEG--AKHYPMIKYA-PDNTILANSFSKTFAMTGWRLGFVIA 251 (391)
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCC--CCCCCHhhcC-CCCEEEEecCchhcCCcHhhhhhhcc
Confidence 7889999999 8999999999999999999998765432 1111112222 234788999999999777 99999
Q ss_pred cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc---CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEE
Q 011567 328 SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE---NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLI 404 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~---~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~ 404 (483)
++++++.+........+ +.+.+...++..+++.-.. ..+.++.++++.+.+.+.|++++++.+..+..+.++++.
T Consensus 252 ~~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~ 329 (391)
T PRK08361 252 PEQVIKDMIKLHAYIIG--NVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFAN 329 (391)
T ss_pred CHHHHHHHHHHHhhhcc--CCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEE
Confidence 99888876543221122 2345555555555532111 134567778888889999988777776655445567777
Q ss_pred ecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 405 LEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 405 l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
++.... + ..++++.+++++||.+.++...... .+..+||++. .++++++++++.|++++++
T Consensus 330 l~~~~~----~---~~~l~~~l~~~~gv~v~pg~~f~~~---~~~~iRi~~~--~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 330 IDETGM----S---SEDFAEWLLEKARVVVIPGTAFGKA---GEGYIRISYA--TSKEKLIEAMERMEKALEE 390 (391)
T ss_pred CCCCCC----C---HHHHHHHHHHhCCEEEcCchhhCCC---CCCEEEEEec--CCHHHHHHHHHHHHHHHhc
Confidence 742110 1 2256666666679999986543210 1245999987 4788999999999888754
No 153
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.93 E-value=1.1e-23 Score=213.16 Aligned_cols=321 Identities=18% Similarity=0.211 Sum_probs=219.3
Q ss_pred CChHHHHHHHHHHHhcCC--CCCCCCCcccChHHHHHHHHHHHhhhCCC---CEEEecccHHHHHhhhhhhccCCcEEEE
Q 011567 124 GHEKLLESCTSALEKYGV--GSCGPRGFYGTIDVHLDCEARIAKFLGTP---DSILYSYGLSTMFSAIPCFCKKGDLIVA 198 (483)
Q Consensus 124 ~~p~i~~a~~~~l~~~g~--g~~~~~~~~g~~~~~~~l~~~La~~~g~e---~~i~~~sG~~a~~~ai~~~~~~gdiI~~ 198 (483)
.++.+.+++.+.+++++. +....+...+..+...++++.+++++|.+ +.++.+++++++..++.++.++||.|++
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~ 91 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDHVIT 91 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEE
Confidence 447889999999888642 11111111122367789999999999965 2345577889999999999899999999
Q ss_pred cCCchhHHHhH----hhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHH
Q 011567 199 DEGVHWGIQNG----LYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIR 269 (483)
Q Consensus 199 ~~~~h~s~~~g----~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~ 269 (483)
....|.++... .+..|.+++.++.+ |++++++.+++ ++++|++..+++++|.+.|+++|.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~----------~~~~v~~~~~~n~tG~~~~~~~i~~ 161 (376)
T TIGR01977 92 TPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKT----------NTKLIVVSHASNVTGTILPIEEIGE 161 (376)
T ss_pred CcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCC----------CCeEEEEECCCCCccccCCHHHHHH
Confidence 99888876543 23347777776543 56777766632 2678888889999999999999999
Q ss_pred HHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccC-CC-c-eeeccHHHHHHHHhcCCce----
Q 011567 270 LKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT-EG-G-FCTGSARVVDHQRLSSSGY---- 342 (483)
Q Consensus 270 l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~-~G-G-~i~~~~~~~~~~~~~~~~~---- 342 (483)
+|++||+++|+|+++++|... +++....+|++++|.+|++++ .| | +++.++..+..+.....++
T Consensus 162 l~~~~~~~livD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
T TIGR01977 162 LAQENGIFFILDAAQTAGVIP---------IDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHSAL 232 (376)
T ss_pred HHHHcCCEEEEEhhhccCccC---------CCchhcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCcccccc
Confidence 999999999999999987643 233334569999999999863 33 3 4444443222211110000
Q ss_pred ---------eec-CCCcHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhccCCCceeecC----CCCCEEEEEec
Q 011567 343 ---------VFS-ASLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASN----PESPIVFLILE 406 (483)
Q Consensus 343 ---------~fs-~~~~p~~~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~~~~~~i~~~----~~~~i~~l~l~ 406 (483)
.|. ++.+...+++..++++.+.+. +.+.++.+++.+++++.|.+.+++.+..+ ...+++.+.+.
T Consensus 233 ~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~ 312 (376)
T TIGR01977 233 IDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVE 312 (376)
T ss_pred ccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEEC
Confidence 011 234555566666788887654 46788899999999999988888887643 13567877774
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc------ccCCCCCceEEEccCCCCHHHHHHHHHHHHH
Q 011567 407 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML------DKCRLPVGIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
.. + ..++.+.+.+++||.++.+.+... +. ..+..||++++..+|++|+++++++|++
T Consensus 313 ~~------~---~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~-~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 313 GI------D---SEEVADILDEKFDIATRTGLHCAPLAHKTIGT-FATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred CC------C---HHHHHHHHhccCCEEEEcccccchHHHHHhCC-CCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 21 1 224566544434999986543211 00 0124599999999999999999999975
No 154
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.93 E-value=2.4e-24 Score=219.58 Aligned_cols=324 Identities=13% Similarity=0.106 Sum_probs=209.3
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCC--CCCCCcccChHHHHHHHHHHHhhhCCC--CEEEecccHHHHH-h
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGS--CGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMF-S 184 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~--~~~~~~~g~~~~~~~l~~~La~~~g~e--~~i~~~sG~~a~~-~ 184 (483)
.+++++.++ .|| .+|++.+++..+. ..-.+. ..+....|..+...++++++++++|.+ +.+++++|+++.. .
T Consensus 21 ~~~~l~~g~-~~~-~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~ 97 (398)
T cd00613 21 SMSFLGSGT-YKH-NPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAA 97 (398)
T ss_pred Ccccccccc-cCC-cCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHH
Confidence 345665554 478 6777777766555 210111 111113456678899999999999976 6666666664444 4
Q ss_pred hhhhhccC--CcEEEEcCCchhHHHhHhhhcC----CeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEec
Q 011567 185 AIPCFCKK--GDLIVADEGVHWGIQNGLYLSR----STVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEA 253 (483)
Q Consensus 185 ai~~~~~~--gdiI~~~~~~h~s~~~g~~~s~----~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~ 253 (483)
+..+...+ ||.|++++++|+++...+...+ .+++.++++ |++++++.+. + ++++|++++
T Consensus 98 ~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~-------~t~~viv~~ 167 (398)
T cd00613 98 GLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVS---E-------EVAALMVQY 167 (398)
T ss_pred HHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcC---C-------CeEEEEEEC
Confidence 44444454 9999999999999988887776 788777764 4556665442 2 367788887
Q ss_pred ccCCCCCccC-hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEcccccccc------CCCceee
Q 011567 254 VYQNSGQIAP-LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA------TEGGFCT 326 (483)
Q Consensus 254 v~~~~G~i~~-L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg------~~GG~i~ 326 (483)
+. ++|.+.| |++|+++|++||+++|+|++|+.|. +. +-... .++|++++|++|+++ +.+||++
T Consensus 168 ~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~-~~---~~~~~-----~~~d~~~~s~~K~~~p~g~Ggp~~g~l~ 237 (398)
T cd00613 168 PN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLT-GL---KPPGE-----YGADIVVGNLQKTGVPHGGGGPGAGFFA 237 (398)
T ss_pred CC-CCceecchHHHHHHHHHhcCCEEEEEecccccc-CC---CChHH-----cCCCEEEeeccccCCCCCCCCCceeEEE
Confidence 65 6799988 5999999999999999999987543 11 11111 235999999999983 3357888
Q ss_pred ccHHHHHHHHhc-----------------------------CCceeecCCCcHHHHHHHHHHHHHHhcC--cHHHHHHHH
Q 011567 327 GSARVVDHQRLS-----------------------------SSGYVFSASLPPYLASAAITAIDVLEEN--PDLITKLKK 375 (483)
Q Consensus 327 ~~~~~~~~~~~~-----------------------------~~~~~fs~~~~p~~~aaa~~al~~l~~~--~~~~~~l~~ 375 (483)
.++++++.+... +..+++ +.++..++++..+++.+.+. +++.++.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~--~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~ 315 (398)
T cd00613 238 VKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNIC--TGQALLALMAAMYIVYLGPEGLKEIAERAHL 315 (398)
T ss_pred EhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccce--ecHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 888877754211 011112 22455555565566655432 357789999
Q ss_pred HHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEc
Q 011567 376 NTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFV 455 (483)
Q Consensus 376 ~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~ 455 (483)
+++++++.|+++.+.........+.+.+.+... ......++++.+++ +||++.... +. .+..||+++
T Consensus 316 ~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~------~~~~~~~~~~~L~~-~gi~~~~~~-~~-----~~~~lRis~ 382 (398)
T cd00613 316 NANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPL------YGIRAEDLAKALID-GGFHAPTMY-LP-----VDGTLMIEP 382 (398)
T ss_pred HHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCc------chHHHHHHHHhhhh-cCccccccc-cC-----CCCeEEEEc
Confidence 999999999887443321112233445554321 01234567776554 588875432 10 124599999
Q ss_pred cCCCCHHHHHHHHHHH
Q 011567 456 SAAHSEADLVKACESL 471 (483)
Q Consensus 456 ~~~~t~edi~~~~~~l 471 (483)
+..+|++|||+++++|
T Consensus 383 ~~~~t~edid~~~~~L 398 (398)
T cd00613 383 TETETKEELDALLEAL 398 (398)
T ss_pred CCCCCHHHHHHHHHhC
Confidence 9999999999998864
No 155
>PRK08912 hypothetical protein; Provisional
Probab=99.93 E-value=3.3e-23 Score=210.37 Aligned_cols=340 Identities=15% Similarity=0.160 Sum_probs=224.7
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC----C-CEEEecccHHHHHh
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT----P-DSILYSYGLSTMFS 184 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~----e-~~i~~~sG~~a~~~ 184 (483)
..+||..+.+- ...++.+.+++.+.+...-.+. ....|...+...+++.+.+.+|. + +.++.+++++++..
T Consensus 27 ~~i~l~~g~p~-~~~p~~~~~~~~~~~~~~~~~Y---~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~ 102 (387)
T PRK08912 27 GAINLGQGFPD-DPGPEDVRRAAADALLDGSNQY---PPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAA 102 (387)
T ss_pred CeEEccCCCCC-CCCCHHHHHHHHHHHhcCCCCC---CCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHH
Confidence 56899887542 2245778888777765421111 11223333334444444333342 2 44555777899988
Q ss_pred hhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCC
Q 011567 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNS 258 (483)
Q Consensus 185 ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~ 258 (483)
++.+++++||.|+++.++|..+...+...|.+++.++.+ |.+++++.+.. +++++++..++|++
T Consensus 103 ~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~----------~~~~v~l~~p~NPt 172 (387)
T PRK08912 103 ALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSP----------RTKAVLLNNPLNPA 172 (387)
T ss_pred HHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCc----------cceEEEEeCCCCCc
Confidence 999999999999999999999988889889988776542 45666655432 24566666778999
Q ss_pred CCccC---hHHHHHHHHHcCcEEEEeCccccccccCC-CCccccccCCCCCceeEEEccccccccCCC---ceeeccHHH
Q 011567 259 GQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRS-GRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARV 331 (483)
Q Consensus 259 G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~-G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~ 331 (483)
|.+.+ +++|.++|++|++++|+||+|+...++.. ...+.+..+. .+.+++++|+||.+|..| ||+++++++
T Consensus 173 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~ 250 (387)
T PRK08912 173 GKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGM--RERTVKIGSAGKIFSLTGWKVGFVCAAPPL 250 (387)
T ss_pred CcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCc--cCceEEEeechhhccCcCceeEEEecCHHH
Confidence 99988 77799999999999999999987655421 1122222222 245799999999999777 999999999
Q ss_pred HHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCC
Q 011567 332 VDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTG 410 (483)
Q Consensus 332 ~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~ 410 (483)
++.+........++. ++....++.+++....+ ..+.+++++++.+.+.+.|++. |+.+..+..+.++++.++....
T Consensus 251 ~~~l~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~g~~~l~~~l~~~~~ 327 (387)
T PRK08912 251 LRVLAKAHQFLTFTT--PPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI-GFPVLPSQGTYFLTVDLAPLGL 327 (387)
T ss_pred HHHHHHHHhhccccC--ChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEecccccCC
Confidence 988765543334443 33334444444421111 1346788888999999999886 7777655456677777753110
Q ss_pred CchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 411 SMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 411 ~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
. ....++++.+++++||.+.++....... ..++.+|+++.. ++++++++++.|+++++
T Consensus 328 ~-----~~~~~~~~~l~~~~gV~v~pg~~f~~~~-~~~~~iRl~~~~--~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 328 A-----EDDVAFCRRLVEEAGVAAIPVSAFYEED-PVTSVVRFCFAK--RDATLDEAVERLAAARR 385 (387)
T ss_pred C-----CCHHHHHHHHHhcCCEEEecchhhCCCC-CCCCEEEEEEeC--CHHHHHHHHHHHHHHHh
Confidence 0 0123567776777799998875432111 113459999885 58999999999988764
No 156
>PRK12414 putative aminotransferase; Provisional
Probab=99.93 E-value=2.8e-23 Score=210.53 Aligned_cols=337 Identities=16% Similarity=0.203 Sum_probs=226.0
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC-----CCEEEecccHHHHH
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT-----PDSILYSYGLSTMF 183 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~-----e~~i~~~sG~~a~~ 183 (483)
+.+|||..+.. .+..++.+.+++.+.++......+ ...|..++...+++.+++++|. ++.+++++|++++.
T Consensus 29 ~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~~Y~---~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~ 104 (384)
T PRK12414 29 HDALNLSQGAP-NFAPDPALVEGVARAMRDGHNQYA---PMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLY 104 (384)
T ss_pred CCeEEcCCCCC-CCCCCHHHHHHHHHHHHhCCCCcC---CCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHH
Confidence 45799998743 233468888888887764211111 1235567777888888888785 24667788889999
Q ss_pred hhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCC
Q 011567 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQN 257 (483)
Q Consensus 184 ~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~ 257 (483)
.++++++.+||.|+++.+.|..+...++..|.+++.++.+ |++.|++.++. ++++|++...+++
T Consensus 105 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~----------~~~~v~i~~p~NP 174 (384)
T PRK12414 105 AAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITP----------RTRMIIVNTPHNP 174 (384)
T ss_pred HHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCc----------ccEEEEEcCCCCC
Confidence 9999999999999999999988888888888888777643 45566555431 2567777778899
Q ss_pred CCCccC---hHHHHHHHHHcCcEEEEeCccccccccCC-CCccccccCCCCCceeEEEccccccccCCC---ceeeccHH
Q 011567 258 SGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRS-GRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSAR 330 (483)
Q Consensus 258 ~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~-G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~ 330 (483)
+|.+.+ +++|+++|++||+++|+||+|....+... ...+..+.+. .+..|+++||||++|.+| ||++++++
T Consensus 175 TG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~~~pGlRiG~~v~~~~ 252 (384)
T PRK12414 175 SATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHREL--AERSVIVSSFGKSYHVTGWRVGYCLAPAE 252 (384)
T ss_pred CCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCc--cCcEEEEecccccccCccceEEEEecCHH
Confidence 999876 78889999999999999999987655321 1122222222 223588999999998777 99999999
Q ss_pred HHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCC
Q 011567 331 VVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTG 410 (483)
Q Consensus 331 ~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~ 410 (483)
+++.++.......++. +.....++.+.++.-....+..+.++++.+.+.+.|++. |+.+..+..+.++++.+.....
T Consensus 253 l~~~l~~~~~~~~~~~--s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~~~~~~ 329 (384)
T PRK12414 253 LMDEIRKVHQFMVFSA--DTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS-RFELLPSEGSFFMLARFRHFSD 329 (384)
T ss_pred HHHHHHHHHhheecCC--CcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCcceEEEEcccccCC
Confidence 9888765432223333 333344444444311111235677888899999999886 7776655455566666642110
Q ss_pred CchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHH
Q 011567 411 SMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 411 ~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
. . ..+++.+++++.||.+.++...... ....+.+||+++. ++++++++++.|.+
T Consensus 330 ~--~----~~~~~~~~l~~~gV~v~pg~~f~~~-~~~~~~iRis~~~--~~~~~~~~~~rl~~ 383 (384)
T PRK12414 330 E--S----DSDFVLRLIRDARVATIPLSAFYTD-GTDTGLIRLSFSK--DDATLVEGARRLCS 383 (384)
T ss_pred C--C----HHHHHHHHHHhCCEEEecchhhcCC-CCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 0 0 1245555677789999987533211 0012459999984 68999999988864
No 157
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=2.1e-23 Score=210.12 Aligned_cols=326 Identities=14% Similarity=0.161 Sum_probs=223.0
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEecccH-HHHHhhhh
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILYSYGL-STMFSAIP 187 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~~sG~-~a~~~ai~ 187 (483)
.+++|..+.. ++..+|.+.+++.+.+... . .|+... ..+|++.||++++.+ +.|++++|+ +++..++.
T Consensus 33 ~~~~l~~~~~-~~~~~~~~~~a~~~~~~~~-~-------~Y~~~~-~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~ 102 (369)
T PRK08153 33 FRARIGANES-GFGPSPSVIAAMREAAAEI-W-------KYGDPE-NHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVR 102 (369)
T ss_pred ceeEecCCCC-CCCCCHHHHHHHHHHHHHh-h-------cCCCCc-cHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHH
Confidence 4579988733 4556789999988876541 1 122222 578999999999864 566666665 66777788
Q ss_pred hhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC-CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHH
Q 011567 188 CFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDE 266 (483)
Q Consensus 188 ~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~-~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~ 266 (483)
+++++||.|+++.++|......+...|.+++.++. +|..+++++++..... .+++|++...++++|.+.|.++
T Consensus 103 ~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~~~~~~l~~~~~~~------~~~~i~l~~P~NPtG~~~~~~~ 176 (369)
T PRK08153 103 LYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDREDLDALLDAARRE------NAPLVYLANPDNPMGSWHPAAD 176 (369)
T ss_pred HhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCCCCCHHHHHHHhccc------CCcEEEEeCCCCCCCCCCCHHH
Confidence 88999999999999998888777778888887774 4555566655543221 2456666666888999999877
Q ss_pred HHHHHHHc--CcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHHHhcCCc
Q 011567 267 LIRLKEKY--RFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSG 341 (483)
Q Consensus 267 l~~l~~k~--~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~~~~~~ 341 (483)
+.++++.+ +++||+||+|+....+ |. ...+... .+..++++||||++|.+| ||+++++++++.+......
T Consensus 177 l~~l~~~~~~~~~lI~DE~y~~~~~~--~~--~~~~~~~-~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~ 251 (369)
T PRK08153 177 IVAFIEALPETTLLVLDEAYCETAPA--GA--APPIDTD-DPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNH 251 (369)
T ss_pred HHHHHHhCCCCcEEEEeCchhhhcCc--cc--chhhhhc-CCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcC
Confidence 77777654 8999999999754322 21 1111111 223688999999999778 9999999998887654332
Q ss_pred eeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHH
Q 011567 342 YVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLED 421 (483)
Q Consensus 342 ~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~ 421 (483)
+ +.++...+++.++++.-+...+..+.++++.+.+.+.|++. |+.+. +..++++++.+... .....+
T Consensus 252 --~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~~~-------~~~a~~ 318 (369)
T PRK08153 252 --F--GMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCGRD-------GAFARA 318 (369)
T ss_pred --C--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECCCC-------cccHHH
Confidence 2 35677777777777521111345666777888888888775 76544 45677777766321 122446
Q ss_pred HHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 422 IADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 422 i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
+.+++++ +||.++....+. .+..+|+++. +++|+++++++|++++...
T Consensus 319 l~~~l~~-~Gi~v~~p~~~~-----~~~~iRis~~---~~~~~~~~~~al~~~~~~~ 366 (369)
T PRK08153 319 VLDGLIA-RDIFVRMPGVAP-----LDRCIRVSCG---PDEELDLFAEALPEALEAA 366 (369)
T ss_pred HHHHHHH-CCeEEeeCCCCC-----CCCeEEEecC---CHHHHHHHHHHHHHHHHHh
Confidence 7776655 599995322111 1245999985 7999999999999988754
No 158
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=2.6e-23 Score=209.60 Aligned_cols=321 Identities=17% Similarity=0.154 Sum_probs=222.8
Q ss_pred eEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----CC---CCEEEe-cccHH
Q 011567 110 EVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT---PDSILY-SYGLS 180 (483)
Q Consensus 110 ~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g~---e~~i~~-~sG~~ 180 (483)
..+|+..+ +.++ .+|.+.+++.+.++....... .|.. .-..+|++.+|+++ |. ++.|+. +++.+
T Consensus 27 ~~i~l~~~~~~~~--~~~~~~~al~~~l~~~~~~~~----~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~ 99 (368)
T PRK03317 27 VPVRLNTNENPYP--PSPALVADIAEAVAEAAAGLN----RYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNE 99 (368)
T ss_pred ceeEecCCCCCCC--CCHHHHHHHHHHHhhhhhhhc----cCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHH
Confidence 46888887 4543 568899999988764211111 1221 12466778888877 32 234555 55568
Q ss_pred HHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEeccc
Q 011567 181 TMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVY 255 (483)
Q Consensus 181 a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~ 255 (483)
++..++++++++||.|++..+++..+...++..|.+++.++.+ |++++++.+++. +.++|++..++
T Consensus 100 ~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~---------~~~~i~l~~p~ 170 (368)
T PRK03317 100 ILQQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEH---------RPDVVFLTSPN 170 (368)
T ss_pred HHHHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhcc---------CCCEEEEeCCC
Confidence 8899999999999999999999988888888888887776532 567777766532 13456666788
Q ss_pred CCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCC-ccccccCCCCCceeEEEccccccccCCC---ceeeccHHH
Q 011567 256 QNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGR-GLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARV 331 (483)
Q Consensus 256 ~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~-g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~ 331 (483)
+++|.+.+.+++.++|+.+++++|+||+|+.... .|. ...+..+..+ ..++++||||++|..| ||+++++++
T Consensus 171 NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~--~~~~~~~~~~~~~~--~~i~~~SfSK~~g~~GlRiG~~~~~~~~ 246 (368)
T PRK03317 171 NPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRR--SGTPSALTLLPEYP--RLVVSRTMSKAFAFAGGRLGYLAAAPAV 246 (368)
T ss_pred CCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcc--cCCcCHHHHHHhCC--CEEEEEechhhhccchhhhhhhhCCHHH
Confidence 9999999999999999999999999999986432 232 2223322222 3578899999999778 999999999
Q ss_pred HHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEE-EecCCCC
Q 011567 332 VDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFL-ILEKSTG 410 (483)
Q Consensus 332 ~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l-~l~~~~~ 410 (483)
++.++..... | ..+++.++++.++++..+...+.+++++++.+.+.+.|++. |+.+..+ .++++.+ .+.
T Consensus 247 ~~~l~~~~~~--~--~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~---- 316 (368)
T PRK03317 247 VDALRLVRLP--Y--HLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL-GLRVAPS-DANFVLFGRFA---- 316 (368)
T ss_pred HHHHHhcCCC--C--CCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEeCCC-CCcEEEEeccC----
Confidence 9988755432 2 34677777777777654333345566778888888888875 7776543 4555433 221
Q ss_pred CchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 411 SMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 411 ~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
+ ..++.+.++ ++||++.+... ++.+||+++ ++++++++++++++++..-+
T Consensus 317 ----~---~~~~~~~l~-~~Gv~v~~~~~--------~~~iRi~~~---~~~~~~~~~~~l~~~~~~~~ 366 (368)
T PRK03317 317 ----D---RHAVWQGLL-DRGVLIRDVGI--------PGWLRVTIG---TPEENDAFLAALAEVLATEL 366 (368)
T ss_pred ----C---HHHHHHHHH-HCCEEEEeCCC--------CCeEEEecC---CHHHHHHHHHHHHHHHHHhh
Confidence 1 235666555 46999986422 245999974 78999999999999876543
No 159
>PRK08068 transaminase; Reviewed
Probab=99.93 E-value=3e-23 Score=210.76 Aligned_cols=331 Identities=17% Similarity=0.187 Sum_probs=219.4
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----CC----C-CEEEeccc
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----P-DSILYSYG 178 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g~----e-~~i~~~sG 178 (483)
|+.++||..+++- +..+|.+.+++.+.++..... .|+...-..+|++++|+++ |. + +.+++++|
T Consensus 31 ~~~~i~l~~~~p~-~~~~~~~~~~~~~~~~~~~~~------~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~ 103 (389)
T PRK08068 31 GHDVINLGQGNPD-QPTPEHIVEALQEAAENPANH------KYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGG 103 (389)
T ss_pred CCCeEEecCCCCC-CCCCHHHHHHHHHHHhCCCCC------CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCc
Confidence 4568999998664 335678889888887642111 1221122355666666665 52 2 34455666
Q ss_pred HHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEE
Q 011567 179 LSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVV 251 (483)
Q Consensus 179 ~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~ 251 (483)
.+++..++.+++++||.|+++.++|..+...+...|.+++.++.+ |++++++.+. . .+++|++
T Consensus 104 ~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~-------~~~~v~l 173 (389)
T PRK08068 104 KAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVA---E-------KAKLMYL 173 (389)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcc---c-------cceEEEE
Confidence 788888899999999999999999999888889999998888753 3344444332 2 2456666
Q ss_pred ecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCC-CccccccCCCCCceeEEEccccccccCCC---ce
Q 011567 252 EAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSG-RGLTEHCGVPVDKIDIVTAAMGHALATEG---GF 324 (483)
Q Consensus 252 e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G-~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~ 324 (483)
..++|++|.+.+ +++|+++|++||+++|+||+|+...+.... ..+....+. .+..++++||||+||.+| ||
T Consensus 174 ~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~--~~~~i~~~S~SK~~g~~GlRiG~ 251 (389)
T PRK08068 174 NYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGA--KDVGIELYTLSKTFNMAGWRVAF 251 (389)
T ss_pred ECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCc--cCCEEEEecchhccCCccceeEe
Confidence 656789999999 578888999999999999999754332100 011122222 234688899999999888 99
Q ss_pred eeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEE
Q 011567 325 CTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL-EENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFL 403 (483)
Q Consensus 325 i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l-~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l 403 (483)
+++++++++.+......+. .+.++....++.+++..- ...+..++.++++.+.+.+.|+++ |+.+..+..+.++++
T Consensus 252 ~~~~~~l~~~l~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~~~~g~~~~~v 328 (389)
T PRK08068 252 AVGNESVIEAINLLQDHLF--VSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI-GWEVDAPKGSFFAWM 328 (389)
T ss_pred EecCHHHHHHHHHHHhhcc--CCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeEEEEE
Confidence 9999999988765543332 233343444444444211 111346778888888999999886 777664445556778
Q ss_pred EecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHH
Q 011567 404 ILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 404 ~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
.+++.. ...++++.++++.||.+.++...... .+..+||++. .+++.++++++.|++
T Consensus 329 ~~~~~~--------~~~~~~~~l~~~~gi~v~pg~~f~~~---~~~~iRi~~~--~~~~~l~~al~~l~~ 385 (389)
T PRK08068 329 PVPKGY--------TSEQFADLLLEKAHVAVAPGNGFGEH---GEGYVRVGLL--TDEERLREAVERIGK 385 (389)
T ss_pred ECCCCC--------CHHHHHHHHHHhCCEEEecchHhCcc---CCCeEEEEEc--CCHHHHHHHHHHHHH
Confidence 774321 12357777776679999886533211 1245999996 467778877777765
No 160
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.93 E-value=2.3e-23 Score=210.96 Aligned_cols=332 Identities=17% Similarity=0.160 Sum_probs=221.1
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCccc--ChHHHHHHHHHHHhhhCCC--CEEEecccHHHHHhhh
Q 011567 111 VVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYG--TIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAI 186 (483)
Q Consensus 111 ~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g--~~~~~~~l~~~La~~~g~e--~~i~~~sG~~a~~~ai 186 (483)
|+|.++. +. .++.+.+++.+.+..+ .+..+....++ ..+...++++.+++++|.+ +.++.++|++++..++
T Consensus 2 yld~aa~---~~-~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al 76 (379)
T TIGR03402 2 YLDNNAT---TR-VDPEVLEAMLPYFTEY-FGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAI 76 (379)
T ss_pred cCCCcCC---CC-CCHHHHHHHHHHHHhc-CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHH
Confidence 4555554 22 4578899988887653 12211111111 1346778899999999965 3455578889998888
Q ss_pred hhhc---cCCcEEEEcCCchhHHHhH---hhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEeccc
Q 011567 187 PCFC---KKGDLIVADEGVHWGIQNG---LYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVY 255 (483)
Q Consensus 187 ~~~~---~~gdiI~~~~~~h~s~~~g---~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~ 255 (483)
.++. .++|.|++....|.+.... +...|.+++.++.+ |++++++.+++ .++++++..++
T Consensus 77 ~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~----------~~~lv~i~~~~ 146 (379)
T TIGR03402 77 KSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITD----------DTALVSVMWAN 146 (379)
T ss_pred HHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcCC----------CcEEEEEEccc
Confidence 7653 4568898888888776433 33357777777542 56777766632 26788888999
Q ss_pred CCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccHHHHHH
Q 011567 256 QNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDH 334 (483)
Q Consensus 256 ~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~~~~~~ 334 (483)
+++|.+.|+++|.++|++||+++++|++|++|... .++....+|+++.|.+|.+|+.| |++..++...
T Consensus 147 n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~g~l~v~~~~~-- 215 (379)
T TIGR03402 147 NETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIP---------IDLKEMNIDMLSLSGHKLHGPKGVGALYIRKGTR-- 215 (379)
T ss_pred CCeeecccHHHHHHHHHHcCCEEEEECcccccccc---------cCcccCCCCEEEEcHHHcCCCCceEEEEECCCCC--
Confidence 99999999999999999999999999999875432 23333456999999999767665 7765554431
Q ss_pred HHhcCC-ce----eecCCCcHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHhhcc-CCCceeecCCC---CCEEEEE
Q 011567 335 QRLSSS-GY----VFSASLPPYLASAAITAIDVLEEN-PDLITKLKKNTAILRTGLSD-IHGLSIASNPE---SPIVFLI 404 (483)
Q Consensus 335 ~~~~~~-~~----~fs~~~~p~~~aaa~~al~~l~~~-~~~~~~l~~~~~~l~~~L~~-~~~~~i~~~~~---~~i~~l~ 404 (483)
++.... ++ ...++.+.....+..++++.+.+. ++..++.+++.+++++.|.+ ++++.+.++.. +.++.+.
T Consensus 216 ~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR03402 216 FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNIS 295 (379)
T ss_pred CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEE
Confidence 111000 00 112344555556666777776543 34567888888999999985 77887765422 2367676
Q ss_pred ecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccC--------------CCCCceEEEccCCCCHHHHHHHHHH
Q 011567 405 LEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKC--------------RLPVGIRLFVSAAHSEADLVKACES 470 (483)
Q Consensus 405 l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~--------------~~~~~lRi~~~~~~t~edi~~~~~~ 470 (483)
+.... ..++.. .|+++||.++.+..+..... ..++.+|++++..+|++|||++++.
T Consensus 296 ~~~~~---------~~~~~~-~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~ 365 (379)
T TIGR03402 296 FEYIE---------GEAILL-LLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEV 365 (379)
T ss_pred ecCCC---------HHHHHH-hhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHH
Confidence 64321 124565 45667999986543221110 0124599999999999999999999
Q ss_pred HHHHHHHH
Q 011567 471 LKRISAVV 478 (483)
Q Consensus 471 l~~~~~~~ 478 (483)
|+++++++
T Consensus 366 l~~~~~~~ 373 (379)
T TIGR03402 366 LPPIIARL 373 (379)
T ss_pred HHHHHHHH
Confidence 99988764
No 161
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.93 E-value=2.3e-23 Score=213.57 Aligned_cols=343 Identities=15% Similarity=0.105 Sum_probs=229.2
Q ss_pred CeeEEEeecCCC--C-CCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC--------CCEEEec
Q 011567 108 GKEVVNFASANY--L-GLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT--------PDSILYS 176 (483)
Q Consensus 108 G~~~id~~s~~~--l-G~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~--------e~~i~~~ 176 (483)
|+++|++..+++ + .+...+.+.+++.+.++..... .|+...-..++++.++++++. ++.++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~------~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~ 124 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYN------SYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTA 124 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCC------CCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeC
Confidence 788999999854 2 3556788999999888752211 122222235677777777632 4566667
Q ss_pred ccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC-------CCHHHHHHHHHHhhhhhhhccCccEEE
Q 011567 177 YGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTADNKRAKKLRRYI 249 (483)
Q Consensus 177 sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~-------~d~~~Le~~l~~~~~~~~~~~~~~~~i 249 (483)
++++++..++.++.++||.|++..+.|..+.......+.+++.++. -|++++++.+.. +++++
T Consensus 125 G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----------~~~~i 194 (430)
T PLN00145 125 GCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADE----------NTVAM 194 (430)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCc----------CceEE
Confidence 7789999999999999999999999998877777888888877653 166777665533 24555
Q ss_pred EEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---c
Q 011567 250 VVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---G 323 (483)
Q Consensus 250 v~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G 323 (483)
++..+.|++|.+.| +++|+++|++||+++|+||+|....++. ........+.....-|+++||||.++.+| |
T Consensus 195 ~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~--~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG 272 (430)
T PLN00145 195 VIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGS--KPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLG 272 (430)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCC--CCccchhhhcccCcEEEEeccccccCCCCeeEE
Confidence 55556789999998 8899999999999999999998765542 11111111121233688999999998777 9
Q ss_pred eeec--cHHHHH------HHHhcCCceeecCCCcHHHHHHHHHHHHHH-h-cCcHHHHHHHHHHHHHHHhhccCCCceee
Q 011567 324 FCTG--SARVVD------HQRLSSSGYVFSASLPPYLASAAITAIDVL-E-ENPDLITKLKKNTAILRTGLSDIHGLSIA 393 (483)
Q Consensus 324 ~i~~--~~~~~~------~~~~~~~~~~fs~~~~p~~~aaa~~al~~l-~-~~~~~~~~l~~~~~~l~~~L~~~~~~~i~ 393 (483)
|+++ ++.+++ .++... .. +.+.+.+...++..+++.- + ...+.++.++++.+.+.+.|++++++.+.
T Consensus 273 ~iv~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~ 349 (430)
T PLN00145 273 WIATCDPNGILKETKVVDSIRNYL--NI-STDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCP 349 (430)
T ss_pred EEEEecchhhhhhhHHHHHHHHHh--cc-cCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 9886 333332 232221 11 1123445555555555421 1 11346778888899999999887777643
Q ss_pred -cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHH
Q 011567 394 -SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 472 (483)
Q Consensus 394 -~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 472 (483)
.+..+.++++.++..... +.....+++.++++++||.+.++..... ++.+||++. .++++++++++.|+
T Consensus 350 ~~P~ga~y~~v~l~~~~~~---~~~~~~~~~~~ll~~~gV~v~pG~~fg~-----~~~lRis~~--~~~~~l~~al~rl~ 419 (430)
T PLN00145 350 HKPEGSMFVMVKLDLSCLS---GIKDDMDFCCKLAKEESVVVLPGSALGM-----KNWLRITFA--IDPPSLEDGLERLK 419 (430)
T ss_pred cCCCeeeEEEeccChhhcC---CCCCHHHHHHHHHHhCCEEEeCccccCC-----CCeEEEEeC--CCHHHHHHHHHHHH
Confidence 345677777776421000 0001235676777778999998765432 355999987 47899999999999
Q ss_pred HHHHHHHhc
Q 011567 473 RISAVVLRD 481 (483)
Q Consensus 473 ~~~~~~~~~ 481 (483)
+++.+.-++
T Consensus 420 ~~~~~~~~~ 428 (430)
T PLN00145 420 SFCLRHAKL 428 (430)
T ss_pred HHHHHhccc
Confidence 998776544
No 162
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.93 E-value=7e-23 Score=207.67 Aligned_cols=331 Identities=16% Similarity=0.200 Sum_probs=219.3
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----CC----CCEEEe-ccc
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----PDSILY-SYG 178 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g~----e~~i~~-~sG 178 (483)
|++++||..++. ++...+.+.+++.+.+...... .|+...-..+|++.+++++ |. ++.+++ +++
T Consensus 28 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~ 100 (383)
T TIGR03540 28 GVDVISLGIGDP-DLPTPKHIVEALCKAAENPENH------RYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGS 100 (383)
T ss_pred CCCeEEeCCCCC-CCCCCHHHHHHHHHHHhCCCCC------CCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCc
Confidence 567899998854 3434678888888877542111 1221112345556666554 43 234555 555
Q ss_pred HHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEE
Q 011567 179 LSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVV 251 (483)
Q Consensus 179 ~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~ 251 (483)
.+++..++.+++++||.|+++.+.+..........|.+++.++.+ |++++++.+. . ++++|++
T Consensus 101 ~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~---~-------~~~~v~i 170 (383)
T TIGR03540 101 KEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA---K-------KAKLMFI 170 (383)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc---c-------cceEEEE
Confidence 688889999999999999999999988888888889988877643 3445544442 1 2566666
Q ss_pred ecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCC-CceeEEEccccccccCCC---ce
Q 011567 252 EAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPV-DKIDIVTAAMGHALATEG---GF 324 (483)
Q Consensus 252 e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~-~~~Di~~~s~~K~lg~~G---G~ 324 (483)
.+++|++|.+.+ +++|+++|++||+++|+||+|+...+.. ........+.. .+..++++||||++|..| ||
T Consensus 171 ~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~--~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~ 248 (383)
T TIGR03540 171 NYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDG--YKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGM 248 (383)
T ss_pred eCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCC--CCCcCcccCCCcccCEEEEEecccccCCccceeeE
Confidence 666899999999 7999999999999999999998655432 11111111211 234688899999998777 99
Q ss_pred eeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEE
Q 011567 325 CTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFL 403 (483)
Q Consensus 325 i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l 403 (483)
+++++++++.+......+.. +.+.....++.++++...+ ..+.++.++++.+.+.+.|++. |+.+..+..+.++++
T Consensus 249 ~i~~~~l~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~ 325 (383)
T TIGR03540 249 AVGNADLIAGLGKVKTNVDS--GVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKPKATFYVWV 325 (383)
T ss_pred EeCCHHHHHHHHHHHHhccc--CCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEecCCCcceEEEE
Confidence 99999998877543322211 2233344444455532211 1345777888899999999886 887765545666778
Q ss_pred EecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHH
Q 011567 404 ILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 404 ~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
.+++.. ...+++..+++++||.+.++...... .++.+||++. .++++++++++.|++
T Consensus 326 ~l~~~~--------~~~~~~~~ll~~~gi~v~~g~~f~~~---~~~~~Ris~~--~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 326 PVPEGY--------TSAEFAARLLEETGVVVTPGVGFGEY---GEGYIRISLT--VPDERLEEAVARIKK 382 (383)
T ss_pred ECCCCC--------CHHHHHHHHHHHCCEEEecchhhCcc---CCCeEEEEec--CCHHHHHHHHHHHhh
Confidence 774321 12357777777779999987543211 1234999986 568888888887754
No 163
>PRK07777 aminotransferase; Validated
Probab=99.93 E-value=5.2e-23 Score=208.90 Aligned_cols=339 Identities=15% Similarity=0.142 Sum_probs=220.6
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-----CEEEecccHHHHHh
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-----DSILYSYGLSTMFS 184 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-----~~i~~~sG~~a~~~ 184 (483)
+++||..+.. ....++.+.+++.+.+... ... .....|..++...+++.+.+.+|.+ +.+++++|++++..
T Consensus 25 ~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~-~~~--Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~ 100 (387)
T PRK07777 25 GAVNLGQGFP-DEDGPPEMLEAAQEAIAGG-VNQ--YPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAA 100 (387)
T ss_pred CeEEccCCCC-CCCCCHHHHHHHHHHHhcC-CCC--CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHH
Confidence 5689888753 2223466777777777642 111 1111233334444444444445642 35666777899999
Q ss_pred hhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC--------CHHHHHHHHHHhhhhhhhccCccEEEEEecccC
Q 011567 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN--------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQ 256 (483)
Q Consensus 185 ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~--------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~ 256 (483)
++.+++++||.|++..+.|..+...+...|.+++.++.+ |++++++.+.+ ++++|+++++++
T Consensus 101 ~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~----------~~~~v~l~~p~N 170 (387)
T PRK07777 101 AVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTP----------RTRALIVNSPHN 170 (387)
T ss_pred HHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCc----------ccEEEEEcCCCC
Confidence 999999999999999999988888888888887766532 45666655432 256777778889
Q ss_pred CCCCccC---hHHHHHHHHHcCcEEEEeCccccccccC-CCCccccccCCCCCceeEEEccccccccCCC---ceeeccH
Q 011567 257 NSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGR-SGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSA 329 (483)
Q Consensus 257 ~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~-~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~ 329 (483)
++|...+ +++|+++|++|++++|+||+|+...+.. ....+.+..+. .+.+++++|+||+||.+| ||+++++
T Consensus 171 PtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~GlRiG~~~~~~ 248 (387)
T PRK07777 171 PTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGM--RERTVTISSAAKTFNVTGWKIGWACGPA 248 (387)
T ss_pred CCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCC--cCcEEEEeechhhccCcCceeEEEecCH
Confidence 9999876 8899999999999999999998765532 11122221111 345899999999999777 9999999
Q ss_pred HHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCC
Q 011567 330 RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKS 408 (483)
Q Consensus 330 ~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~-~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~ 408 (483)
++++.+........++.+ ++... ++..++...+ ...++++.++++.+.+.+.|++. ++.+..+..+.++++.++..
T Consensus 249 ~l~~~~~~~~~~~~~~~~-~~~q~-~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~g~~~~~~~~~~~ 325 (387)
T PRK07777 249 PLIAAVRAAKQYLTYVGG-APFQP-AVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA-GFEVHDSAGTYFLCADPRPL 325 (387)
T ss_pred HHHHHHHHHHhhcccCCC-CHHHH-HHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC-CCCccCCCcceEEEeccccc
Confidence 988877654332333332 23332 2233332111 11346778889999999999886 77766554555666665321
Q ss_pred CCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 409 TGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 409 ~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
.. . ...++++.+++++||.+.++..........+..+||++.. ++++++++++.|+++.
T Consensus 326 ~~-~-----~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~--~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 326 GY-D-----DGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK--RDDTLDEAIRRLRALR 384 (387)
T ss_pred CC-C-----CHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 10 0 1246788777777999998753221111112459999864 7999999999998764
No 164
>PRK09148 aminotransferase; Validated
Probab=99.93 E-value=8.5e-23 Score=208.28 Aligned_cols=343 Identities=12% Similarity=0.134 Sum_probs=225.5
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----CC----C-CEEEecc
Q 011567 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----P-DSILYSY 177 (483)
Q Consensus 107 ~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g~----e-~~i~~~s 177 (483)
.|+.++||..++. .+...+.+.+++.+.++.-.. . .|+...-..+|++.+|+++ |. + +.++.++
T Consensus 28 ~~~~~i~l~~~~p-~~~~~~~~~~~~~~~~~~~~~--~----~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G 100 (405)
T PRK09148 28 AGADIIDLGMGNP-DLPTPQHIVDKLCETAQDPRT--H----RYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLG 100 (405)
T ss_pred cCCCeEEcCCCCC-CCCCCHHHHHHHHHHHcCccc--C----CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCC
Confidence 3667899988744 233357788887776643111 1 1221122345555555554 53 3 3444456
Q ss_pred cHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC----CHHHHHHHHHHhhhhhhhccCccEEEEEec
Q 011567 178 GLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----DMDSLRNTLERVTADNKRAKKLRRYIVVEA 253 (483)
Q Consensus 178 G~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~ 253 (483)
+++++..++.+++++||.|+++.++|..+...+...|.+++.++.. +.+++++.++.... +++++++..
T Consensus 101 ~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~-------~~~~v~l~~ 173 (405)
T PRK09148 101 SKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIP-------KPIALIVNY 173 (405)
T ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccc-------cceEEEEeC
Confidence 6788999999999999999999999988887888889888877642 34566666654322 256777777
Q ss_pred ccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCC-CCceeEEEccccccccCCC---ceee
Q 011567 254 VYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVP-VDKIDIVTAAMGHALATEG---GFCT 326 (483)
Q Consensus 254 v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~-~~~~Di~~~s~~K~lg~~G---G~i~ 326 (483)
++|++|.+.+ +++|.++|++||+++|+||+|+...++. ........++ ..+..++++||||++|.+| ||++
T Consensus 174 P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~--~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v 251 (405)
T PRK09148 174 PSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDG--NPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAV 251 (405)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCC--CCCCChhhCCCccCcEEEEeccccccCCcchheeeee
Confidence 7889999999 5789999999999999999998755432 1111111121 1234577899999999777 9999
Q ss_pred ccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEe
Q 011567 327 GSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLIL 405 (483)
Q Consensus 327 ~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l 405 (483)
+++++++.+........++. ++....++.+.++..+. ..+.++.++++.+.+.+.|++. ++.+..+..+.++++.+
T Consensus 252 ~~~~~i~~l~~~~~~~~~~~--~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f~~~~l 328 (405)
T PRK09148 252 GNERLIAALTRVKSYLDYGA--FTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA-GWDIPPPAASMFAWAPI 328 (405)
T ss_pred CCHHHHHHHHHHHHHhccCC--ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCccCCCCeeEEEEEEC
Confidence 99999988765432222222 34444444455532111 1345677788888899999875 77655455667788877
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 406 EKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 406 ~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
+...... ...+++..++++.||.+.++...... .+..+||++. .++++++++++.|.+++.+.
T Consensus 329 ~~~~~~~-----~~~~~~~~ll~~~gV~v~pg~~f~~~---~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~~ 391 (405)
T PRK09148 329 PEAFRHL-----GSLEFSKLLVEKADVAVAPGVGFGEH---GDGYVRIALV--ENEQRIRQAARNIKRFLSSA 391 (405)
T ss_pred CCccCCC-----CHHHHHHHHHHhCCEEEeCchhhCCC---CCCeEEEEec--CCHHHHHHHHHHHHHHHHHH
Confidence 5321100 12356676776679999987543211 1245999886 57899999999999888653
No 165
>PRK08960 hypothetical protein; Provisional
Probab=99.93 E-value=4.5e-23 Score=209.27 Aligned_cols=332 Identities=14% Similarity=0.087 Sum_probs=219.7
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----C----CCCEEEecccH
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G----TPDSILYSYGL 179 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g----~e~~i~~~sG~ 179 (483)
|+++++|..+.. ++...+.+.+++.+.+.....+ |+...-..++++.+|+++ | .++.+++++++
T Consensus 31 ~~~~i~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~-------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~ 102 (387)
T PRK08960 31 GHDVIHLEIGEP-DFTTAEPIVAAGQAALAAGHTR-------YTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGS 102 (387)
T ss_pred CCCeEEeCCCCC-CCCCCHHHHHHHHHHHhcCCCc-------cCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcH
Confidence 456788888744 3434688999998888742121 211122345666666665 3 23455557778
Q ss_pred HHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEEe
Q 011567 180 STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVVE 252 (483)
Q Consensus 180 ~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e 252 (483)
+++..++.++.++||.|+++.+.|......+...|.+++.++.. |++++++.+++ .++++++.
T Consensus 103 ~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~----------~~~~i~i~ 172 (387)
T PRK08960 103 GALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNA----------DTVGALVA 172 (387)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCc----------cceEEEEE
Confidence 99999999999999999999999998888888888887766532 45566555432 24455556
Q ss_pred cccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceee
Q 011567 253 AVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCT 326 (483)
Q Consensus 253 ~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~ 326 (483)
.++|++|...+ +++|+++|++||+++|+||+|....++.. ......+.+ ..++++|+||.+|..| ||++
T Consensus 173 ~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~---~~~~~~~~~--~vi~~~S~SK~~g~~GlRiG~~~ 247 (387)
T PRK08960 173 SPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD---AASVLEVDD--DAFVLNSFSKYFGMTGWRLGWLV 247 (387)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC---CCChhhccC--CEEEEeecccccCCcccEEEEEE
Confidence 66889999998 56788889999999999999976544321 112233322 3578899999998666 9999
Q ss_pred ccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHH-H-hcCcHHHHHHHHHHHHHHHhhccCCCceee-cCCCCCEEEE
Q 011567 327 GSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDV-L-EENPDLITKLKKNTAILRTGLSDIHGLSIA-SNPESPIVFL 403 (483)
Q Consensus 327 ~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~-l-~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~-~~~~~~i~~l 403 (483)
+++++++.++.....+..+ .+.+...++.++++. . ....+.++.++++.+.+.+.|++. ++.+. .+..+.++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~--~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~p~g~~f~~~ 324 (387)
T PRK08960 248 APPAAVPELEKLAQNLYIS--ASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-GFGIAVEPQGAFYLYA 324 (387)
T ss_pred cCHHHHHHHHHHHhhhccC--CCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCcCCCeeEEEEE
Confidence 9999988776543333332 244554545555531 1 111245667778888888888875 65542 2345667777
Q ss_pred EecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 404 ILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 404 ~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
.+++... + ..+++..+++++||.+.++....... ....+|+++.. +.++++++++.|+++++
T Consensus 325 ~~~~~~~----~---~~~~~~~ll~~~gi~v~pg~~f~~~~--~~~~iRi~~~~--~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 325 DISAFGG----D---AFAFCRHFLETEHVAFTPGLDFGRHQ--AGQHVRFAYTQ--SLPRLQEAVERIARGLR 386 (387)
T ss_pred eccccCC----C---HHHHHHHHHHhCCEEEcCchHhCCCC--CCCeEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 7643100 1 23567777777799999875443211 12359999985 67888888888887654
No 166
>PRK07683 aminotransferase A; Validated
Probab=99.93 E-value=5.9e-23 Score=208.32 Aligned_cols=334 Identities=15% Similarity=0.138 Sum_probs=224.2
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----CC----C-CEEEecccH
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----P-DSILYSYGL 179 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g~----e-~~i~~~sG~ 179 (483)
+.++||..++. .+...+.+.+++.+.+.....+ |+......+|++.+++++ |. + +.++.++++
T Consensus 28 ~~~i~l~~~~p-~~~~~~~~~~a~~~~~~~~~~~-------Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~ 99 (387)
T PRK07683 28 DNLISLTIGQP-DFPTPSHVKEAAKRAITENYTS-------YTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGAS 99 (387)
T ss_pred CCeEEecCCCC-CCCCCHHHHHHHHHHHhcCCCC-------CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChH
Confidence 46789888753 2334578889998888753221 222222355666666665 42 2 445556668
Q ss_pred HHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC------CHHHHHHHHHHhhhhhhhccCccEEEEEec
Q 011567 180 STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKRAKKLRRYIVVEA 253 (483)
Q Consensus 180 ~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~ 253 (483)
+|+..++.++.++||.|+++.+.+..+...+...|.+++.++.+ |.+++++.+.. ++++|++..
T Consensus 100 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~----------~~~~i~i~~ 169 (387)
T PRK07683 100 EAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITE----------KTRCVVLPY 169 (387)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCc----------CceEEEEeC
Confidence 99999999999999999999998888887888889988887643 34556555432 256777788
Q ss_pred ccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeec
Q 011567 254 VYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTG 327 (483)
Q Consensus 254 v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~ 327 (483)
+++++|...+ +++|+++|+++|+++|+||+|+...++.....+.++.+. .+..++++|+||++|.+| ||+++
T Consensus 170 p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~~~vi~~~s~SK~~~~pGlRiG~i~~ 247 (387)
T PRK07683 170 PSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEM--REKTIVINGLSKSHSMTGWRIGFLFA 247 (387)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCC--cCCeEEEeeccccccCccceeEEEEc
Confidence 8889999887 789999999999999999999876654332233332222 223688899999999778 99999
Q ss_pred cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEec
Q 011567 328 SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILE 406 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~-~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~ 406 (483)
++++++.+.... .+.+.+ .+.+...++.+.++.-. ...+.++.++++.+.+.+.|.+. ++.+..+..+.++++.+.
T Consensus 248 ~~~l~~~~~~~~-~~~~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~ 324 (387)
T PRK07683 248 PSYLAKHILKVH-QYNVTC-ASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-GLDVEKPTGAFYLFPSIG 324 (387)
T ss_pred CHHHHHHHHHHH-HhccCC-CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCeeEEEEEecc
Confidence 999888876432 233222 23444444544553211 11245667788888999999875 776654434445555553
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 407 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
.... + ..+++..+++++||.+.++...... .+..+||++.. +++++++++++|.+++.+
T Consensus 325 ~~~~----~---~~~~~~~ll~~~gI~v~pg~~f~~~---~~~~~Ri~~~~--~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 325 HFTM----S---SFDFALDLVEEAGLAVVPGSAFSEY---GEGYVRLSYAY--SIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred cCCC----C---HHHHHHHHHHhCCEEEcCchhhCCC---CCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 2110 1 2245666677789999887543210 12459999874 799999999999988754
No 167
>PRK08175 aminotransferase; Validated
Probab=99.93 E-value=1.1e-22 Score=207.04 Aligned_cols=341 Identities=15% Similarity=0.158 Sum_probs=225.8
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----CC----CCEEEeccc-
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----PDSILYSYG- 178 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g~----e~~i~~~sG- 178 (483)
|++++||..++..+. ..+.+.+++.+.+...... .|+...-..+|++.+++++ |. ++.+++++|
T Consensus 28 ~~~~i~l~~g~p~~~-~~~~~~~~~~~~~~~~~~~------~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~ 100 (395)
T PRK08175 28 GEDIIDFSMGNPDGP-TPPHIVEKLCEVAQRPDTH------GYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGS 100 (395)
T ss_pred CCCeEEcCCCCCCCC-CCHHHHHHHHHHHhCCCcC------CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCc
Confidence 567899998876554 4566888877766431111 1222222345555555553 42 224555555
Q ss_pred HHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC----CHHHHHHHHHHhhhhhhhccCccEEEEEecc
Q 011567 179 LSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----DMDSLRNTLERVTADNKRAKKLRRYIVVEAV 254 (483)
Q Consensus 179 ~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v 254 (483)
.+++..++.+++++||.|+++++.|......+...|.+++.++.+ +.+++++.++.... ++++|++..+
T Consensus 101 ~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~-------~~~~v~i~~p 173 (395)
T PRK08175 101 KEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYP-------KPKMMILGFP 173 (395)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCCcHHHHHHHHhhccC-------CceEEEEeCC
Confidence 477888888999999999999999988777778888888777643 36677776654322 2567777777
Q ss_pred cCCCCCccCh---HHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCC-CceeEEEccccccccCCC---ceeec
Q 011567 255 YQNSGQIAPL---DELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPV-DKIDIVTAAMGHALATEG---GFCTG 327 (483)
Q Consensus 255 ~~~~G~i~~L---~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~-~~~Di~~~s~~K~lg~~G---G~i~~ 327 (483)
++++|.+.+. ++|+++|++||+++|+||+|+...++ +........++. .+..++++|+||.||.+| ||+++
T Consensus 174 ~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~--~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~ 251 (395)
T PRK08175 174 SNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYD--GWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG 251 (395)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccC--CCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeC
Confidence 8899999985 89999999999999999999865543 221111122211 234577899999998666 99999
Q ss_pred cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEec
Q 011567 328 SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILE 406 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~ 406 (483)
++++++.+........++. ++....++.++++..+. ..++++.++++.+++.+.|++. ++.+..+..++++++.++
T Consensus 252 ~~~l~~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~~i~i~l~ 328 (395)
T PRK08175 252 NPELVSALARIKSYHDYGT--FTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASMYVWAKIP 328 (395)
T ss_pred CHHHHHHHHHHHhhcccCC--CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEEEEEEECC
Confidence 9999988764332223332 23334444444532111 1345677778888899999886 777665557888898886
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 407 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
+..... ...+++.+++++.||.+.++...... .+..+||++. .+++.++++++.|++++++
T Consensus 329 ~~~~~~-----~~~~~~~~l~~~~gv~v~p~~~f~~~---~~~~lRis~~--~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 329 EPYAAM-----GSLEFAKKLLNEAKVCVSPGIGFGDY---GDTHVRFALI--ENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred cccCCC-----CHHHHHHHHHHhCCEEEeCchhhCcC---CCCeEEEEeC--CCHHHHHHHHHHHHHHHHh
Confidence 421100 12467776776779999886432210 1245999885 5789999999999988865
No 168
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.93 E-value=1.2e-22 Score=206.18 Aligned_cols=331 Identities=17% Similarity=0.236 Sum_probs=218.2
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----CC----CCEEEe-ccc
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----PDSILY-SYG 178 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g~----e~~i~~-~sG 178 (483)
|.+++||..++. .+...+.+.+++.+.+...... .|+...-..+|++.+++++ |. ++.+++ +++
T Consensus 30 ~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~ 102 (385)
T PRK09276 30 GVDVISLGIGDP-DLPTPDHIIEAMCKAVEDPENH------QYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGS 102 (385)
T ss_pred CCCEEEecCCCC-CCCCCHHHHHHHHHHHhCCCCC------CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCc
Confidence 456899998854 2334678888888887642211 1211111345556666655 42 233555 555
Q ss_pred HHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEE
Q 011567 179 LSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVV 251 (483)
Q Consensus 179 ~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~ 251 (483)
++++..++.+++++||.|+++.+++..+....+..|.+++.++.. |++++++.+. . ++++|++
T Consensus 103 ~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~---~-------~~~~v~l 172 (385)
T PRK09276 103 KEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA---K-------KAKLMFI 172 (385)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc---c-------cceEEEE
Confidence 688889999999999999999999988888888889988877642 3344443332 1 2566777
Q ss_pred ecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCC-CceeEEEccccccccCCC---ce
Q 011567 252 EAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPV-DKIDIVTAAMGHALATEG---GF 324 (483)
Q Consensus 252 e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~-~~~Di~~~s~~K~lg~~G---G~ 324 (483)
.+.+|++|.+.+ +++|+++|++||+++|+||+|..+.++ +........++. .+..|+++||||.+|..| ||
T Consensus 173 ~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 250 (385)
T PRK09276 173 NYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYD--GYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGF 250 (385)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecC--CCCCCChhccCCCcCCEEEEecchhhcCCcchhhee
Confidence 777899999998 688999999999999999999866543 221211122221 234688899999999877 99
Q ss_pred eeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEE
Q 011567 325 CTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFL 403 (483)
Q Consensus 325 i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l 403 (483)
+++++++++.++....... .+.++....++.++++..+. .++.++.++++.+.+.+.|++. ++.+..+..+.++++
T Consensus 251 ~i~~~~l~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~v 327 (385)
T PRK09276 251 AVGNADLIAGLGKVKSNVD--SGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-GLEVEPPKATFYVWA 327 (385)
T ss_pred eeCCHHHHHHHHHHHhhcc--CCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEE
Confidence 9999999888765432221 12244444445555532111 1345677788888999999886 777665545556777
Q ss_pred EecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHH
Q 011567 404 ILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 404 ~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
.++... ...+++..+++++||.+.++...... .+..+||++. .++++++++++.|.+
T Consensus 328 ~~~~~~--------~~~~l~~~ll~~~gi~v~~g~~f~~~---~~~~~Ris~~--~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 328 PVPKGY--------TSAEFATLLLDKAGVVVTPGNGFGEY---GEGYFRIALT--VPDERIEEAVERIKK 384 (385)
T ss_pred ECCCCC--------CHHHHHHHHHHhCCEEECCchhhCCC---CCCeEEEEeC--CCHHHHHHHHHHHhh
Confidence 774321 12356777776679999887543210 1245999986 478888888887754
No 169
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.93 E-value=4.6e-23 Score=210.45 Aligned_cols=325 Identities=15% Similarity=0.113 Sum_probs=215.2
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCc--ccChHHHHHHHHHHHhhhCCC--CEEEecccHHHHHhhh
Q 011567 111 VVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGF--YGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAI 186 (483)
Q Consensus 111 ~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~--~g~~~~~~~l~~~La~~~g~e--~~i~~~sG~~a~~~ai 186 (483)
++.|.++. .|. .++.+.+++.+.++.++.++.++... .+......++++ + +++|.+ +.++.+++++++..++
T Consensus 28 ~iyld~~a-~g~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~~ 103 (406)
T TIGR01814 28 VIYLDGNS-LGL-MPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKEDEVVVMNTLTINLHLLL 103 (406)
T ss_pred cEEecCCC-cCc-CcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCCcEEEeCCchHHHHHHH
Confidence 34444333 565 47888999998888876543322211 122344455544 5 888864 4555577778888888
Q ss_pred hhhccCC---cEEEEcCCchhHHHhH----hhhcCCeE----EEecC-C----CHHHHHHHHHHhhhhhhhccCccEEEE
Q 011567 187 PCFCKKG---DLIVADEGVHWGIQNG----LYLSRSTV----VYFKH-N----DMDSLRNTLERVTADNKRAKKLRRYIV 250 (483)
Q Consensus 187 ~~~~~~g---diI~~~~~~h~s~~~g----~~~s~~~v----~~~~~-~----d~~~Le~~l~~~~~~~~~~~~~~~~iv 250 (483)
.++.+++ +.|+++...|.+.... ++..|.++ +.++. + |++++++.++...+ ++++|+
T Consensus 104 ~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~-------~t~lv~ 176 (406)
T TIGR01814 104 ASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGD-------DIAVIL 176 (406)
T ss_pred HHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCC-------CeEEEE
Confidence 8765443 4788888888875443 34456665 33332 2 67788887765433 378999
Q ss_pred EecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEcccccccc-CCCceeeccH
Q 011567 251 VEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA-TEGGFCTGSA 329 (483)
Q Consensus 251 ~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg-~~GG~i~~~~ 329 (483)
++++++.+|.+.|+++|.++|++||+++++|++|++|.+. +++...++|++++|.+|+++ ++||++...+
T Consensus 177 ~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~---------id~~~~gvD~~~~s~hK~l~g~pG~~l~v~~ 247 (406)
T TIGR01814 177 LSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVP---------LDLHDWGVDFACWCTYKYLNAGPGAGAFVHE 247 (406)
T ss_pred EeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcc---------cccccCCCCEEEEcCccccCCCCCeEEEEeh
Confidence 9999999999999999999999999999999999987653 34444567999999999984 5565543322
Q ss_pred HHHHHHHhcCCc-------e-------------ee-cCCCcHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhcc
Q 011567 330 RVVDHQRLSSSG-------Y-------------VF-SASLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSD 386 (483)
Q Consensus 330 ~~~~~~~~~~~~-------~-------------~f-s~~~~p~~~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~ 386 (483)
+..+.+.....+ + .| .++.|...++++.++++++.+. +...++.+++.+++++.|.+
T Consensus 248 ~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 327 (406)
T TIGR01814 248 KHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKA 327 (406)
T ss_pred hhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHh
Confidence 222222211001 0 01 1234556677777899988653 56788899999999998877
Q ss_pred C----CCceeecCC----CCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEc-cC
Q 011567 387 I----HGLSIASNP----ESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFV-SA 457 (483)
Q Consensus 387 ~----~~~~i~~~~----~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~-~~ 457 (483)
+ +++++.++. .++++.+.++ . + .+++.+.+ .++||.+.... +..||+++ +.
T Consensus 328 ~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~------~---~~~~~~~L-~~~gi~v~~~~---------~~~iRiS~~~~ 387 (406)
T TIGR01814 328 RCGGPPVLTIITPRDHAQRGCQLSLTHP-V------P---GKAVFQAL-IKRGVIGDKRE---------PSVIRVAPVPL 387 (406)
T ss_pred hcCCCCceEEeCCCChhhcCCeEEEEec-C------C---HHHHHHHH-HHCCEEEeccC---------CCeEEEechhc
Confidence 5 347776532 3457777763 1 1 23566654 45699875321 23599999 68
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 011567 458 AHSEADLVKACESLKRIS 475 (483)
Q Consensus 458 ~~t~edi~~~~~~l~~~~ 475 (483)
.+|++||++++++|++++
T Consensus 388 ~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 388 YNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred cCCHHHHHHHHHHHHHHh
Confidence 999999999999998764
No 170
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.93 E-value=1.1e-22 Score=206.64 Aligned_cols=339 Identities=15% Similarity=0.158 Sum_probs=221.5
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----C--C-CC-EEEe-cc
Q 011567 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G--T-PD-SILY-SY 177 (483)
Q Consensus 107 ~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g--~-e~-~i~~-~s 177 (483)
+|++++||..+.. .+..++.+.+++.+.+...... .|+...-..+|++.+|+++ | . ++ .|+. ++
T Consensus 28 ~~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G 100 (388)
T PRK07366 28 AGKELIDLSLGSS-DLPAPAHALEAIAQSLHDPSTH------GYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIG 100 (388)
T ss_pred cCCCeEEeCCCCC-CCCCCHHHHHHHHHHHhCcccC------CCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCC
Confidence 4677899998743 2434688899988877542211 1221122345666666655 4 2 23 4555 45
Q ss_pred cHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCC----HHHHHHHHHHhhhhhhhccCccEEEEEec
Q 011567 178 GLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHND----MDSLRNTLERVTADNKRAKKLRRYIVVEA 253 (483)
Q Consensus 178 G~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d----~~~Le~~l~~~~~~~~~~~~~~~~iv~e~ 253 (483)
+.+++..++.+++++||.|+++.+++......++..|.+++.++.++ ..+++++.+.... +.++|++.+
T Consensus 101 s~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-------~~k~i~l~~ 173 (388)
T PRK07366 101 SQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLA-------QARLMVLSY 173 (388)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcc-------cceEEEEeC
Confidence 56888899999999999999999999998888899999988876531 1223333333222 245666777
Q ss_pred ccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCC-ceeEEEccccccccCCC---ceee
Q 011567 254 VYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVD-KIDIVTAAMGHALATEG---GFCT 326 (483)
Q Consensus 254 v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~-~~Di~~~s~~K~lg~~G---G~i~ 326 (483)
.+|++|.+.+ +++|+++|++||++||+||+|....+... .........++. +..|+++||||++|.+| ||++
T Consensus 174 p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~-~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v 252 (388)
T PRK07366 174 PHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGE-VEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAI 252 (388)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCC-CCCCChhhCCCCcccEEEEeecccccCCcchhheehc
Confidence 8899999988 67788899999999999999987655321 101111222222 23578899999998666 9999
Q ss_pred ccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEe
Q 011567 327 GSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLIL 405 (483)
Q Consensus 327 ~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~-~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l 405 (483)
+++++++.+......+.++. ++....++.+++...+ ..++.++.++++.+.+.+.|++. ++.+..+..+.++++.+
T Consensus 253 ~~~~li~~l~~~~~~~~~~~--~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f~~~~~ 329 (388)
T PRK07366 253 GNAQLIQALRQVKAVVDFNQ--YRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-GWPVPLPEATMYVWAKL 329 (388)
T ss_pred CCHHHHHHHHHHHhhcccCC--CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeEEEEEEC
Confidence 99999988765443333332 2323333444442111 11346777888888899999876 76655455677888887
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 406 EKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 406 ~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
+.... .+ ..++++.++++.||.+.++...... .++.+||++. .++++++++++.|+++
T Consensus 330 ~~~~~---~~---~~~~~~~l~~~~gv~v~pg~~f~~~---~~~~iRi~~~--~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 330 PEPWQ---GN---SVEFCTQLVAQTGVAASPGSGFGKS---GEGYVRFALV--HDPDILEEAVERIAAF 387 (388)
T ss_pred CcccC---CC---HHHHHHHHHHhCCEEEeCchHhCcC---CCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 53210 01 2356666667779999987533210 1235999986 4799999999999875
No 171
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.6e-22 Score=205.77 Aligned_cols=331 Identities=15% Similarity=0.208 Sum_probs=216.2
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----CC---C-CEEEe-ccc
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT---P-DSILY-SYG 178 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g~---e-~~i~~-~sG 178 (483)
|++++||..++.... .++.+.+++.+.+..... ..|+...-..+|++.+|+++ |. + +.+++ +++
T Consensus 34 g~~~i~l~~g~p~~~-~p~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~ 106 (394)
T PRK05942 34 GLDLIDLGMGNPDGA-APQPVIEAAIAALADPQN------HGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGS 106 (394)
T ss_pred CCCeEEcCCCCCCCC-CCHHHHHHHHHHHhCCCC------ccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccCh
Confidence 567899998866544 456678877777653211 11222222345666666665 42 2 33544 666
Q ss_pred HHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEE
Q 011567 179 LSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVV 251 (483)
Q Consensus 179 ~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~ 251 (483)
++++..++.+++++||.|+++.++|......+...|.+++.++.+ |++++++.+.. ++++|++
T Consensus 107 ~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~----------~~k~i~l 176 (394)
T PRK05942 107 KEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQ----------QAKILYF 176 (394)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccc----------cceEEEE
Confidence 788989999999999999999999988887777888888777542 45666655532 2567776
Q ss_pred ecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCC-CceeEEEccccccccCCC---ce
Q 011567 252 EAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPV-DKIDIVTAAMGHALATEG---GF 324 (483)
Q Consensus 252 e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~-~~~Di~~~s~~K~lg~~G---G~ 324 (483)
..++|++|.+.+ +++|+++|++||+++|+||+|....... .-......++. .+..++++||||.+|..| ||
T Consensus 177 ~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~--~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~ 254 (394)
T PRK05942 177 NYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDG--YQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGF 254 (394)
T ss_pred cCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCC--CCCCChhhCCCccccEEEEecchhccCChhhheee
Confidence 667889999998 7889999999999999999998665421 11111111211 234677899999998777 99
Q ss_pred eeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEE
Q 011567 325 CTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFL 403 (483)
Q Consensus 325 i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l 403 (483)
+++++++++.++.......++ .+.....++.++++..++ ..+.+++++++.+.+.+.|++. ++.+..+..+.++++
T Consensus 255 i~~~~~l~~~l~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~~~ 331 (394)
T PRK05942 255 VVGNRHIIQGLRTLKTNLDYG--IFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIPPTKATMYLWV 331 (394)
T ss_pred eecCHHHHHHHHHHHhhcccC--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeeEEEE
Confidence 999999998887543322232 234444455555643221 1346777888888899999876 777665444446777
Q ss_pred EecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHH
Q 011567 404 ILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 404 ~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
.++... + ..+++.++++++||.+.++..... ..+..+|+++. .+.+.+.++++.+.+
T Consensus 332 ~~~~~~-----~---~~~~~~~~l~~~gV~v~~g~~f~~---~~~~~iRis~~--~~~~~l~~~l~~l~~ 388 (394)
T PRK05942 332 PCPVGM-----G---STDFALNVLQKTGVVVTPGNAFGE---GGEGYVRISLI--ADCDRLGEALDRLKQ 388 (394)
T ss_pred ECCCCC-----C---HHHHHHHHHHHCCEEEeCChhhCc---CCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 774321 1 124555667778999987653321 01245999996 345566666655544
No 172
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.93 E-value=9.6e-23 Score=207.06 Aligned_cols=337 Identities=14% Similarity=0.131 Sum_probs=225.2
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----CC----C-CEEEecccH
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----P-DSILYSYGL 179 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g~----e-~~i~~~sG~ 179 (483)
..+|||..++. .+...+.+.+++.+.+...-..... ..| ..+|++.+++++ |. + +.++.++++
T Consensus 30 ~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g----~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~ 101 (391)
T PRK07309 30 PGILKLTLGEP-DFTTPDHVKEAAKRAIDANQSHYTG---MAG----LLELRQAAADFVKEKYNLDYAPENEILVTIGAT 101 (391)
T ss_pred CCeEEcCCCCC-CCCCCHHHHHHHHHHHhcCCCCCCC---CCC----cHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChH
Confidence 45899998743 2334577888888777642111111 123 345666666654 32 2 455557778
Q ss_pred HHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC------CHHHHHHHHHHhhhhhhhccCccEEEEEec
Q 011567 180 STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKRAKKLRRYIVVEA 253 (483)
Q Consensus 180 ~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~ 253 (483)
+++..++.++.++||.|++..+.|......++..|.+++.++.+ |++++++.+++..+ ++++|++..
T Consensus 102 ~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~-------~~~~i~l~~ 174 (391)
T PRK07309 102 EALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGD-------KLKAVILNY 174 (391)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCC-------CeEEEEEEC
Confidence 99999999999999999999999988888888889888777642 56777777654322 256777666
Q ss_pred ccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccc-cCCCCccccccCCCCCceeEEEccccccccCCC---ceee
Q 011567 254 VYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVL-GRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCT 326 (483)
Q Consensus 254 v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~l-g~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~ 326 (483)
++|++|...+ +++|+++|++||+++|+||+|+...+ +.....+.+ ..+ +..++++|+||++|..| ||++
T Consensus 175 P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~---~~~-~~~i~~~S~SK~~g~~GlRvG~~v 250 (391)
T PRK07309 175 PANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAE---YLP-DQTILINGLSKSHAMTGWRIGLIF 250 (391)
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHH---hcc-CCEEEEecChhhccCccceeEEEE
Confidence 6889999877 89999999999999999999987655 211111111 122 23588899999998777 9999
Q ss_pred ccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEe
Q 011567 327 GSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLIL 405 (483)
Q Consensus 327 ~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l 405 (483)
+++++++.+.... .+... +.+++...++.+.++.... ....++.++++.+++.+.|++. ++.+..+..+.++++.+
T Consensus 251 ~~~~~~~~~~~~~-~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~p~gg~~~~~~l 327 (391)
T PRK07309 251 APAEFTAQLIKSH-QYLVT-AATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL-GFKIIKPDGAFYIFAKI 327 (391)
T ss_pred eCHHHHHHHHHHH-hhccc-CCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEEC
Confidence 9999988876542 23322 2344544555555542111 1235667788888899999886 77766554555667666
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 406 EKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 406 ~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
+.... . ...++++++++++||.+.++...... .+..+|++++. +.+++++++++|++++++.
T Consensus 328 ~~~~~---~---~~~~~~~~l~~~~gv~v~pg~~f~~~---~~~~iRi~~~~--~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 328 PAGYN---Q---DSFKFLQDFARKKAVAFIPGAAFGPY---GEGYVRLSYAA--SMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred CCCCC---C---CHHHHHHHHHHhCCEEEeCchhhCCC---CCCEEEEEecC--CHHHHHHHHHHHHHHHHhh
Confidence 43211 0 12356666666679999887542210 12459999874 6899999999999988653
No 173
>PLN02187 rooty/superroot1
Probab=99.93 E-value=6.5e-23 Score=211.65 Aligned_cols=346 Identities=14% Similarity=0.092 Sum_probs=225.4
Q ss_pred CeeEEEeecCCC--CC-CCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC--------CCCEEEec
Q 011567 108 GKEVVNFASANY--LG-LIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG--------TPDSILYS 176 (483)
Q Consensus 108 G~~~id~~s~~~--lG-~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g--------~e~~i~~~ 176 (483)
++.+|+|..++. .. +...+++.+++.+.++.. .+ ..|+...-..+|++.+|++++ .++.++.+
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~-~~-----~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~ 138 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSG-KG-----NSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTA 138 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCC-CC-----CCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeC
Confidence 678999998843 33 334578888888888752 11 123333335667788888763 23445556
Q ss_pred ccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC---C----CHHHHHHHHHHhhhhhhhccCccEEE
Q 011567 177 YGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH---N----DMDSLRNTLERVTADNKRAKKLRRYI 249 (483)
Q Consensus 177 sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~---~----d~~~Le~~l~~~~~~~~~~~~~~~~i 249 (483)
++++++..++.+++++||.|+++.+++..+...+...|.+++.++. + |+++|++.+.. .++++
T Consensus 139 G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~----------~~~~v 208 (462)
T PLN02187 139 GCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADE----------NTVAM 208 (462)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCC----------CcEEE
Confidence 6679999999999999999999999998887778888888877753 2 56667655432 24455
Q ss_pred EEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---c
Q 011567 250 VVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---G 323 (483)
Q Consensus 250 v~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G 323 (483)
++..++|++|.+.+ +++|+++|++||+++|+||+|...+++. ........+.....-++++||||+++.+| |
T Consensus 209 ~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~--~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG 286 (462)
T PLN02187 209 VVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGD--NPFVSMGKFASIVPVLTLAGISKGWVVPGWKIG 286 (462)
T ss_pred EEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCC--CCceeHHHhccCCcEEEEecchhhcCCccceeE
Confidence 55555789999998 8899999999999999999998766542 11111111111222588899999998777 9
Q ss_pred eeecc-H-HH---HHHHHhcCCceeecCCCcHHHHHHHHHHHHHH--hcCcHHHHHHHHHHHHHHHhhccCCCcee-ecC
Q 011567 324 FCTGS-A-RV---VDHQRLSSSGYVFSASLPPYLASAAITAIDVL--EENPDLITKLKKNTAILRTGLSDIHGLSI-ASN 395 (483)
Q Consensus 324 ~i~~~-~-~~---~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l--~~~~~~~~~l~~~~~~l~~~L~~~~~~~i-~~~ 395 (483)
|++++ + .+ ++.+......+..+.+.+.+...++.++++.- ....+.++.++++.+.+.+.|+++++... ..+
T Consensus 287 ~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P 366 (462)
T PLN02187 287 WIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKP 366 (462)
T ss_pred EEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCC
Confidence 99873 3 22 23333322233333333556666666666421 11134677788888999999988744332 223
Q ss_pred CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 396 PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 396 ~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
..+.++++.+.........+ ..+++..+++++||.+.++..... ++.+||++.. .++.+++++++|.+++
T Consensus 367 ~gg~fl~~~l~~~~~~~~~~---~~~~~~~ll~~~gV~v~pG~~fg~-----~~~iRis~~~--~~e~l~~al~rL~~~l 436 (462)
T PLN02187 367 ESCTYLLTKLELSLMDNIKD---DIDFCVKLAREENLVFLPGDALGL-----KNWMRITIGV--EAHMLEDALERLKGFC 436 (462)
T ss_pred CEeEEEEeecChhhCCCCCC---HHHHHHHHHhhCCEEEECccccCC-----CCeEEEEeCC--CHHHHHHHHHHHHHHH
Confidence 35677777664211000001 124555566677999998754322 3459999864 6899999999999999
Q ss_pred HHHHhc
Q 011567 476 AVVLRD 481 (483)
Q Consensus 476 ~~~~~~ 481 (483)
++..++
T Consensus 437 ~~~~~~ 442 (462)
T PLN02187 437 TRHAKK 442 (462)
T ss_pred HHhhhc
Confidence 876654
No 174
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.92 E-value=7.4e-23 Score=208.73 Aligned_cols=339 Identities=13% Similarity=0.139 Sum_probs=226.5
Q ss_pred CeeEEEeecCCCC---CCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC-------CCCEEEecc
Q 011567 108 GKEVVNFASANYL---GLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG-------TPDSILYSY 177 (483)
Q Consensus 108 G~~~id~~s~~~l---G~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g-------~e~~i~~~s 177 (483)
|++++||..+++- .+...+.+.+++.+.++..... .|+...-..+|++.++++++ .++.++.++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G 103 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYN------GYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSG 103 (401)
T ss_pred CCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCC------CCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcC
Confidence 4578999988553 4556788999988877752111 12222234667888888876 234556677
Q ss_pred cHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC-------CCHHHHHHHHHHhhhhhhhccCccEEEE
Q 011567 178 GLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTADNKRAKKLRRYIV 250 (483)
Q Consensus 178 G~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~-------~d~~~Le~~l~~~~~~~~~~~~~~~~iv 250 (483)
+++++..++.+++++||.|++..+.+..+...+...|.+++.++. -|++.+++.+.. .+++|+
T Consensus 104 ~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~----------~~~~v~ 173 (401)
T TIGR01264 104 CSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDE----------KTAALI 173 (401)
T ss_pred hHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhcc----------CceEEE
Confidence 789999999999999999999999988888888888888877643 146666655432 245667
Q ss_pred EecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ce
Q 011567 251 VEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GF 324 (483)
Q Consensus 251 ~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~ 324 (483)
+...++++|.+.+ +++|+++|+++|+++|+||+|....+. +........+.+....++++||||+++..| ||
T Consensus 174 ~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ 251 (401)
T TIGR01264 174 VNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFS--GATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGW 251 (401)
T ss_pred EcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccC--CcccccHHHcCCCCcEEEEccCcccCCCccceEEE
Confidence 7777889999887 788999999999999999999865543 221211122333222578899999988776 99
Q ss_pred eeccH------HHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHH--hcCcHHHHHHHHHHHHHHHhhccCCCceeecCC
Q 011567 325 CTGSA------RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL--EENPDLITKLKKNTAILRTGLSDIHGLSIASNP 396 (483)
Q Consensus 325 i~~~~------~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l--~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~ 396 (483)
+++++ ++++.++..... .++ .++....++.+.++.. ....+.++.++++.+.+.+.|++++++.+..+.
T Consensus 252 iv~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~ 328 (401)
T TIGR01264 252 IIIHDRRGILRDIRDGLVKLSQR-ILG--PCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPS 328 (401)
T ss_pred EEecCcchhHHHHHHHHHHHhhc-cCC--CCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCC
Confidence 98763 344444332211 112 2444545555555421 111346777888888899999887676655556
Q ss_pred CCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 397 ESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 397 ~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
.+.++++.++..... +.....+++..+++++||.+.++..... ++.+|+++.. +++++++++++|.++++
T Consensus 329 ~g~f~~~~~~~~~~~---~~~~~~~~~~~l~~~~gI~v~pg~~f~~-----~~~iRis~~~--~~~~l~~~l~rl~~~~~ 398 (401)
T TIGR01264 329 GAMYMMVGIEMEHFP---EFKNDVEFTERLVAEQSVFCLPGSCFEY-----PGFFRVVLTV--PVVMMEEACSRIQEFCE 398 (401)
T ss_pred eeeEEEEEecccccC---CCCCHHHHHHHHHHhCCEEEeCchhcCC-----CCeEEEEEcC--CHHHHHHHHHHHHHHHh
Confidence 788888887531000 0001235667777677999988754321 3459999874 58999999999998876
Q ss_pred H
Q 011567 477 V 477 (483)
Q Consensus 477 ~ 477 (483)
+
T Consensus 399 ~ 399 (401)
T TIGR01264 399 R 399 (401)
T ss_pred c
Confidence 4
No 175
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.92 E-value=7.6e-23 Score=208.59 Aligned_cols=333 Identities=14% Similarity=0.151 Sum_probs=219.6
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCC---cccChHHHHHHHHHHHhhhCCC--CEEEecccHHHHHh
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRG---FYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFS 184 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~---~~g~~~~~~~l~~~La~~~g~e--~~i~~~sG~~a~~~ 184 (483)
-|+|.++.. . .++.+.+++.+.++... +....+. .+...+...++++.+++++|.+ +.++.++|++++..
T Consensus 5 ~yld~aa~~---~-~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~ 79 (402)
T TIGR02006 5 IYLDYAATT---P-VDPRVAEKMMPYLTEKF-GNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNL 79 (402)
T ss_pred EEeeCCcCC---C-CCHHHHHHHHHHHHhcC-CCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHH
Confidence 578877653 2 56889999988886542 1111111 1111246778899999999964 34555777888888
Q ss_pred hhhhh----ccCCcEEEEcCCchhHHHhHh---hhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEe
Q 011567 185 AIPCF----CKKGDLIVADEGVHWGIQNGL---YLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVE 252 (483)
Q Consensus 185 ai~~~----~~~gdiI~~~~~~h~s~~~g~---~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e 252 (483)
++.++ .++||.|+++...|.++.... +..|.+++.++.+ |++++++.+++ .+++|++.
T Consensus 80 ~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~----------~~~lv~v~ 149 (402)
T TIGR02006 80 AIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIRD----------DTILVSIM 149 (402)
T ss_pred HHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCC----------CCEEEEEE
Confidence 77664 368999999999998876554 3347788777643 56667665532 26789999
Q ss_pred cccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccHHH
Q 011567 253 AVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARV 331 (483)
Q Consensus 253 ~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~~~ 331 (483)
++++++|.+.|+++|.++|++||+++++|+++++|... +++....+|+++.|.+|.+|+.| |+++.+++.
T Consensus 150 ~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~ 220 (402)
T TIGR02006 150 HVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIP---------INVNELKVDLMSISGHKIYGPKGIGALYVRRKP 220 (402)
T ss_pred CCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcc---------cCccccCCCEEEEehhhhcCCCceEEEEEccCC
Confidence 99999999999999999999999999999999976542 22222356999999999888655 666555433
Q ss_pred HHHHHhc--CCce--ee-cCCCcHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHhhccCCCceeecCC--CCC-EEE
Q 011567 332 VDHQRLS--SSGY--VF-SASLPPYLASAAITAIDVLEEN-PDLITKLKKNTAILRTGLSDIHGLSIASNP--ESP-IVF 402 (483)
Q Consensus 332 ~~~~~~~--~~~~--~f-s~~~~p~~~aaa~~al~~l~~~-~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~--~~~-i~~ 402 (483)
...+... +.++ .| .++.+...+.+..++++.+++. +...++.+++.+++++.|++++++.+.++. ..| ++.
T Consensus 221 ~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~ 300 (402)
T TIGR02006 221 RVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLN 300 (402)
T ss_pred CCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEE
Confidence 2221111 1010 12 2345565666666788877643 456788889999999999888787765432 232 333
Q ss_pred EEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccc---------cC-----CCCCceEEEccCCCCHHHHHHHH
Q 011567 403 LILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLD---------KC-----RLPVGIRLFVSAAHSEADLVKAC 468 (483)
Q Consensus 403 l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~---------~~-----~~~~~lRi~~~~~~t~edi~~~~ 468 (483)
+.+... + .+.+... + +++.++.+...... .. .....||++++..+|++|||+++
T Consensus 301 v~f~~~------~---~~~~~~~-l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~ 368 (402)
T TIGR02006 301 VSFNYV------E---GESLIMA-L--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAV 368 (402)
T ss_pred EEEeCc------C---HHHHHHh-c--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHH
Confidence 444311 1 1123332 3 36776654332110 00 01245999999999999999999
Q ss_pred HHHHHHHHHH
Q 011567 469 ESLKRISAVV 478 (483)
Q Consensus 469 ~~l~~~~~~~ 478 (483)
++|+++++.+
T Consensus 369 ~~l~~~~~~~ 378 (402)
T TIGR02006 369 KLVKSAIDKL 378 (402)
T ss_pred HHHHHHHHHH
Confidence 9999988764
No 176
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.92 E-value=1.2e-22 Score=207.10 Aligned_cols=346 Identities=16% Similarity=0.179 Sum_probs=226.7
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC---CCEEEe-cccHHHHH
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT---PDSILY-SYGLSTMF 183 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~---e~~i~~-~sG~~a~~ 183 (483)
|.+++|+..+.. .+..++.+.+++.+.+.+...+. ....|..++...+++.+++.+|. ++.+++ +++++|+.
T Consensus 32 ~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~~Y---~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 107 (402)
T PRK06107 32 GRSIVDLTVGEP-DFDTPDHIKQAAVAAIERGETKY---TLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIF 107 (402)
T ss_pred cCCEEEcCCCCC-CCCCCHHHHHHHHHHHHcCCCCC---CCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH
Confidence 456788888743 23246888899888887522211 11345566777777777777664 233555 55579999
Q ss_pred hhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEEecccC
Q 011567 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQ 256 (483)
Q Consensus 184 ~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~ 256 (483)
.++.++.++||.|+++.++|..+...+...+..++.++.. |++++++.+.. ++++|++..+.|
T Consensus 108 ~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~----------~~~~v~l~~p~N 177 (402)
T PRK06107 108 LALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITP----------RTRWLILNAPSN 177 (402)
T ss_pred HHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCc----------CceEEEEECCCC
Confidence 8998899999999999998777776677677666655432 34555554421 255666666788
Q ss_pred CCCCccC---hHHHHHHHHHc-CcEEEEeCccccccccCCCCccccccCCCC--CceeEEEccccccccCCC---ceeec
Q 011567 257 NSGQIAP---LDELIRLKEKY-RFRVFLDESNSFGVLGRSGRGLTEHCGVPV--DKIDIVTAAMGHALATEG---GFCTG 327 (483)
Q Consensus 257 ~~G~i~~---L~~l~~l~~k~-~~~li~DEa~s~g~lg~~G~g~~~~~~v~~--~~~Di~~~s~~K~lg~~G---G~i~~ 327 (483)
++|.+.+ +++|+++|++| ++++|+||+|+...+.. ........+.+ .+..++++||||.+|.+| ||+++
T Consensus 178 PtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~--~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~ 255 (402)
T PRK06107 178 PTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDD--EPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAG 255 (402)
T ss_pred CCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCC--CCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeec
Confidence 9999987 67888899998 99999999998644432 11111111111 134688899999998666 99999
Q ss_pred cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEec
Q 011567 328 SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILE 406 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~-~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~ 406 (483)
++++++.++........ ..+.....++...++.-+ ...+.++.++++.+.+.+.|++++|+.+..+..+.++++.+.
T Consensus 256 ~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~ 333 (402)
T PRK06107 256 PADLIAAINKLQSQSSS--CPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCA 333 (402)
T ss_pred CHHHHHHHHHHHHhccc--CCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEeeecc
Confidence 99999887664322222 234555555555553101 112456777888888999998876777665556667777763
Q ss_pred CCCCC--chhh-HHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 407 KSTGS--MKND-LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 407 ~~~~~--~~~~-~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
...+. .+.. .....+++..+++++||.+.++..... ++.+|+++.. ++++++++++.|++.++++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~-----~~~iRis~~~--~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 334 GLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGL-----SPYFRLSIAT--SLETLEEACARIERAVAAL 401 (402)
T ss_pred cccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCC-----CCeEEEEeCC--CHHHHHHHHHHHHHHHHhc
Confidence 21000 0000 001235666677778999998765432 3569999984 7999999999999988765
No 177
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=4.2e-23 Score=207.37 Aligned_cols=316 Identities=15% Similarity=0.136 Sum_probs=218.4
Q ss_pred CCeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEe-cccHHHHH
Q 011567 107 SGKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILY-SYGLSTMF 183 (483)
Q Consensus 107 ~G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~-~sG~~a~~ 183 (483)
+++.+++|..+ |.+|. +|.+++++.+.+.... .| ...-..+|++.||++++.+ +.|++ +++++++.
T Consensus 27 ~~~~~i~l~~nen~~~~--~~~v~~a~~~~~~~~~--------~Y-p~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~ 95 (366)
T PRK01533 27 GDHSFVKLASNENPFGC--SPRVLDELQKSWLDHA--------LY-PDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQ 95 (366)
T ss_pred CCCceEEeCCCCCCCCC--CHHHHHHHHHHHHhcC--------cC-CCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHH
Confidence 35678999988 66654 5889999888765421 11 1122467999999999854 45555 55568888
Q ss_pred hhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCC
Q 011567 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSG 259 (483)
Q Consensus 184 ~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G 259 (483)
.++.+++++||.|++..+++..+...+...|.+++.++.+ |+++|++.+++ .++++++..++|++|
T Consensus 96 ~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~d~~~l~~~~~~----------~~~~v~i~~P~NPTG 165 (366)
T PRK01533 96 IISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALNNGVYDLDEISSVVDN----------DTKIVWICNPNNPTG 165 (366)
T ss_pred HHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecCCCCcCHHHHHHHhCc----------CCcEEEEeCCCCCCC
Confidence 9999999999999999999999888888999988887653 56666665532 245666667789999
Q ss_pred CccChHH---HHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHH
Q 011567 260 QIAPLDE---LIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVD 333 (483)
Q Consensus 260 ~i~~L~~---l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~ 333 (483)
.+.+.++ |+++|++++ ++|+||+|............... ++..+..|+++||||++|.+| ||+++++++++
T Consensus 166 ~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~--~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~ 242 (366)
T PRK01533 166 TYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPL--LEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIE 242 (366)
T ss_pred CCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHH--hccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHH
Confidence 9999554 555555665 67789999754332100011111 122334688999999999777 99999999998
Q ss_pred HHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCch
Q 011567 334 HQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMK 413 (483)
Q Consensus 334 ~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~ 413 (483)
.++..... + +.+.+...++.++|+.-+...+..+..+++.+++.+.++.+ |+++.. ++++++++.+.+
T Consensus 243 ~l~~~~~~--~--~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~~-~~~nf~~~~~~~------ 310 (366)
T PRK01533 243 KLNVVRLP--F--NVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN-EIPFYQ-SQTNFIFLPVEN------ 310 (366)
T ss_pred HHHHhcCC--C--CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccCC-CcCcEEEEeCCC------
Confidence 88654322 2 34677777777777421111234566666777777777775 777654 478888887631
Q ss_pred hhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 414 NDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 414 ~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
..++.+.++ ++||.+++. ++.+||++ -+.+|.++++++|++++..
T Consensus 311 -----~~~~~~~l~-~~GI~Vr~~----------~~~iRis~---~~~~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 311 -----GGEIYEACA-HAGFIIRPF----------PNGVRITV---GTREQNEGVISVLQQHFEN 355 (366)
T ss_pred -----HHHHHHHHH-HCCcEEccC----------CCceEEeC---CCHHHHHHHHHHHHHHHHh
Confidence 124566555 569999862 24599998 5889999999999988654
No 178
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.92 E-value=8.8e-23 Score=206.70 Aligned_cols=333 Identities=15% Similarity=0.164 Sum_probs=223.5
Q ss_pred CeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC--CEEEecccHHHHHh
Q 011567 108 GKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFS 184 (483)
Q Consensus 108 G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e--~~i~~~sG~~a~~~ 184 (483)
++++|++..+ +.++ .+|.+.+++.+.+...... .|+...-..++++++|+++|.+ +.++++++++++..
T Consensus 27 ~~~~i~l~~~~~~~~--~~~~~~~a~~~~~~~~~~~------~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~ 98 (380)
T PRK06225 27 DKEMIWMGQNTNHLG--PHEEVREAMIRCIEEGEYC------KYPPPEGFPELRELILKDLGLDDDEALITAGATESLYL 98 (380)
T ss_pred cCCeEEccCCCCCCC--CCHHHHHHHHHHHhcCCCC------CCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHH
Confidence 3568898877 4443 5689999999888753221 2333334678999999999854 56666888899999
Q ss_pred hhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC--------CCHHHHHHHHHHhhhhhhhccCccEEEEEecccC
Q 011567 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH--------NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQ 256 (483)
Q Consensus 185 ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~--------~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~ 256 (483)
++.+++++||.|++.++.|......+...|.+++.++. .|++++++.+.. .+++|++....+
T Consensus 99 ~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~----------~~~~v~l~~p~N 168 (380)
T PRK06225 99 VMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDE----------NTRLIYLIDPLN 168 (380)
T ss_pred HHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCC----------CceEEEEeCCCC
Confidence 99999999998888888887777777788888887763 145556554432 245655555677
Q ss_pred CCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHH
Q 011567 257 NSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSAR 330 (483)
Q Consensus 257 ~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~ 330 (483)
++|.+.+ +++|+++|++||+++|+||+|+....+ .... ..+.+ +..+++.|+||++|..| ||++++++
T Consensus 169 ptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~---~~~~--~~~~~-~~~i~~~s~SK~~g~~G~RiG~i~~~~~ 242 (380)
T PRK06225 169 PLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFARE---HTLA--AEYAP-EHTVTSYSFSKIFGMAGLRIGAVVATPD 242 (380)
T ss_pred CCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhcc---CCch--hhcCC-CCEEEEeechhhcCCccceeEEEecCHH
Confidence 8899876 899999999999999999998643222 1111 12222 34677889999998666 99999999
Q ss_pred HHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCceee-cCCCCCEEEEEecCC
Q 011567 331 VVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIA-SNPESPIVFLILEKS 408 (483)
Q Consensus 331 ~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~-~~~~~~i~~l~l~~~ 408 (483)
+++.++.... ..+ +.+....+++.++++...+ .+...+..+++.+.+.+.|++++++.+. .++.++++++.+...
T Consensus 243 l~~~~~~~~~-~~~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 319 (380)
T PRK06225 243 LIEVVKSIVI-NDL--GTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEA 319 (380)
T ss_pred HHHHHHHHHh-ccc--CCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccc
Confidence 9988765421 122 2355565555555543211 1234455566677788888876664332 234567777777432
Q ss_pred CCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 409 TGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 409 ~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
. . ...++++.+. ++||.+.++.+..... .+..+|+++. .++++++++++.|++++.++-
T Consensus 320 ~--~-----~~~~l~~~l~-~~gi~v~~g~~~~~~~--~~~~iR~s~~--~~~e~l~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 320 G--I-----DPEDLVEYLL-ERKIFVRQGTYTSKRF--GDRYIRVSFS--IPREQVEVFCEEFPDVVETLR 378 (380)
T ss_pred c--C-----CHHHHHHHHH-HCCEEEcCCcccCcCC--CCceEEEEeC--CCHHHHHHHHHHHHHHHHHhh
Confidence 1 0 1235666655 5699998764322100 1235999986 489999999999999988653
No 179
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.92 E-value=3.2e-22 Score=204.06 Aligned_cols=350 Identities=14% Similarity=0.162 Sum_probs=221.7
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC----CCEEEe-cccHHH
Q 011567 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT----PDSILY-SYGLST 181 (483)
Q Consensus 107 ~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~----e~~i~~-~sG~~a 181 (483)
.|.+++||..++..+. ..+.+.+++.+.+..... .+.....|...+...+++.+.+..|. ++.++. +++.++
T Consensus 31 ~~~~~~~l~~g~p~~~-~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a 107 (403)
T PRK08636 31 AGEDIIDFSMGNPDGP-TPQHIIDKLCESAQKPKT--HGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG 107 (403)
T ss_pred cCCCEEEcCCcCCCCC-CCHHHHHHHHHHhcCCcc--CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence 3557899988765443 345577777665543111 11111233334444444444444352 223555 555688
Q ss_pred HHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEEecc
Q 011567 182 MFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVVEAV 254 (483)
Q Consensus 182 ~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v 254 (483)
+..++.+++++||.|++++++|..+...+...|.+++.++.+ |++++.+.+++.-.. .+.+++++++..+
T Consensus 108 l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~---~~~~~~~i~~~~P 184 (403)
T PRK08636 108 YVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRE---SSPKPKYVVVNFP 184 (403)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhh---ccCCceEEEEeCC
Confidence 899999999999999999999999988889999998776531 444443333322110 1113567777777
Q ss_pred cCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCC-CceeEEEccccccccCCC---ceeec
Q 011567 255 YQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPV-DKIDIVTAAMGHALATEG---GFCTG 327 (483)
Q Consensus 255 ~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~-~~~Di~~~s~~K~lg~~G---G~i~~ 327 (483)
+|++|.+.+ +++|+++|++|++++|+||+|+...+.. ........++. .+..++++|+||++|.+| ||+++
T Consensus 185 ~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~ 262 (403)
T PRK08636 185 HNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDG--YKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVG 262 (403)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCC--CCCCChhcCCCccccEEEEEecccccCCccceeeeeeC
Confidence 899999998 6889999999999999999998665432 21111122321 234566799999998666 99999
Q ss_pred cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEec
Q 011567 328 SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILE 406 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~ 406 (483)
++++++.+........++.+ ++.. .++..+++..+. ..++++.++++.+.+.+.|++. ++.+..+..+.++++.++
T Consensus 263 ~~~li~~~~~~~~~~~~~~~-~~~q-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~p~~g~~~~~~l~ 339 (403)
T PRK08636 263 NKKLVGALKKIKSWLDYGMF-TPIQ-VAATIALDGDQSCVEEIRETYRKRRDVLIESFANA-GWELQKPRASMFVWAKIP 339 (403)
T ss_pred CHHHHHHHHHHHHHhcccCC-hHHH-HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCcceEEEEECC
Confidence 99998877543222122222 2333 223233321111 1245666777888888888875 676655557888888885
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 407 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
+..... ...+++..++++.||.+.++...... .++.+||++. .++++++++++.|+++++.
T Consensus 340 ~~~~~~-----~~~~l~~~ll~~~gV~v~pg~~f~~~---~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 340 EPARHL-----GSLEFSKQLLTEAKVAVSPGIGFGEY---GDEYVRIALI--ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred CccCCC-----CHHHHHHHHHHhCCEEEecchhhCcC---CCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 421100 12356666676779999987543211 1245999986 6899999999999998865
No 180
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.92 E-value=8.6e-24 Score=202.88 Aligned_cols=337 Identities=18% Similarity=0.228 Sum_probs=236.8
Q ss_pred CCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC----CC-EEEecccHHHHHhhhhhhccCC
Q 011567 119 YLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT----PD-SILYSYGLSTMFSAIPCFCKKG 193 (483)
Q Consensus 119 ~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~----e~-~i~~~sG~~a~~~ai~~~~~~g 193 (483)
+..+..++.+.+++++.+..-..+.. .| -||..++...|.+.+++++|. ++ .++.+++.+++.+++.+++++|
T Consensus 40 fp~~~~P~fv~ea~~~~~~~~~~~qY-t~-~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~G 117 (420)
T KOG0257|consen 40 FPDFPPPKFVTEAAKNAAKEPSTNQY-TR-GYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPG 117 (420)
T ss_pred CCCCCCcHHHHHHHHHHhccchhccc-cc-cCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCC
Confidence 33444566788888888876423222 22 478888999999999998873 34 4455666699999999999999
Q ss_pred cEEEEcCCchhHHHhHhhhcCCeEEEecCC-------------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCC
Q 011567 194 DLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQ 260 (483)
Q Consensus 194 diI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~ 260 (483)
|.|++-++++.++....++.|.+.+.++.+ |+++||..+.+ ++++|+++.++|++|.
T Consensus 118 DeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~----------kTk~Ii~ntPhNPtGk 187 (420)
T KOG0257|consen 118 DEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE----------KTKAIILNTPHNPTGK 187 (420)
T ss_pred CEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccC----------CccEEEEeCCCCCcCc
Confidence 999999999999999999999887766543 78888887765 4789999999999999
Q ss_pred ccC---hHHHHHHHHHcCcEEEEeCccccccccCC-CCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHH
Q 011567 261 IAP---LDELIRLKEKYRFRVFLDESNSFGVLGRS-GRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVD 333 (483)
Q Consensus 261 i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~-G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~ 333 (483)
+.+ |++|++||+|||+++|.||+|...++... .-.++..-|+ .+..|.++|+||++|..| ||+++++.++.
T Consensus 188 vfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm--~ertitvgS~gKtf~~TGWrlGW~igp~~L~~ 265 (420)
T KOG0257|consen 188 VFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGM--YERTITVGSFGKTFGVTGWRLGWAIGPKHLYS 265 (420)
T ss_pred ccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCch--hheEEEeccccceeeeeeeeeeeeechHHhhh
Confidence 998 99999999999999999999987665421 1111212333 455788999999999888 99999999988
Q ss_pred HHHhcCCceeecCCCcHHHHHHHHHHHHHH-h------cCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEec
Q 011567 334 HQRLSSSGYVFSASLPPYLASAAITAIDVL-E------ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILE 406 (483)
Q Consensus 334 ~~~~~~~~~~fs~~~~p~~~aaa~~al~~l-~------~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~ 406 (483)
+.+.-....+|..+.+-..+.++.-+++.. . ...++.+.++++++.|.+.|.++ |+++..+..+++++..+.
T Consensus 266 ~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~adfs 344 (420)
T KOG0257|consen 266 ALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWADFS 344 (420)
T ss_pred hHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEEecc
Confidence 887766667777653332232222233321 1 01237788999999999999998 999998888888888886
Q ss_pred CCCCCchh----hHHHHHHHHHHHHHhCCEEEEeecccccccCC-CC-CceEEEccCCCCHHHHHHHHHHHH
Q 011567 407 KSTGSMKN----DLQLLEDIADWALKEDGVFVVTSKRSMLDKCR-LP-VGIRLFVSAAHSEADLVKACESLK 472 (483)
Q Consensus 407 ~~~~~~~~----~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~-~~-~~lRi~~~~~~t~edi~~~~~~l~ 472 (483)
........ +...-.+++.+++++.|+.+.|......+.+. .. .-+|++.. -+++-++++.+.++
T Consensus 345 ~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~--k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 345 LAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFC--KADETLRKAIERLK 414 (420)
T ss_pred ccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHH--hhHHHHHHHHHHHh
Confidence 22111000 11112356777888888877665432221111 00 11566553 45666777777666
No 181
>PLN02656 tyrosine transaminase
Probab=99.92 E-value=9.2e-23 Score=208.28 Aligned_cols=343 Identities=15% Similarity=0.121 Sum_probs=225.0
Q ss_pred ECCeeEEEeecCCCC---CCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC--------CCCEEE
Q 011567 106 ISGKEVVNFASANYL---GLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG--------TPDSIL 174 (483)
Q Consensus 106 ~~G~~~id~~s~~~l---G~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g--------~e~~i~ 174 (483)
..|+.++||..+++- .+..++.+.+++.+.+...... .|+...-..++++.++++++ .++.++
T Consensus 28 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~ 101 (409)
T PLN02656 28 ENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFN------GYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFI 101 (409)
T ss_pred ccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCC------CCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEE
Confidence 357889999988552 3546788999998888752211 12222223556677777653 235566
Q ss_pred ecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccE
Q 011567 175 YSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRR 247 (483)
Q Consensus 175 ~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~ 247 (483)
++++++++..++.+++++||.|+++.+.|..+.......|.+++.++.. |++++++.++. .++
T Consensus 102 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~----------~~~ 171 (409)
T PLN02656 102 TSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQ----------NTV 171 (409)
T ss_pred eCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhcc----------Cce
Confidence 6777899999999999999999999999987777777778888776542 55666655432 144
Q ss_pred EEEEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC--
Q 011567 248 YIVVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-- 322 (483)
Q Consensus 248 ~iv~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-- 322 (483)
++++..+++++|.+.+ +++|+++|++||+++|+||+|....+.. +.......+.....-|+++||||+|+.+|
T Consensus 172 ~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlR 249 (409)
T PLN02656 172 ALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGS--NPFVPMGVFGSIVPVLTLGSLSKRWIVPGWR 249 (409)
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCC--CCcccHHHhcccCcEEEEcccchhccCccee
Confidence 5555556888999875 8899999999999999999998655532 21111111122233688899999998777
Q ss_pred -ceeecc--------HHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHH-h-cCcHHHHHHHHHHHHHHHhhccCCCce
Q 011567 323 -GFCTGS--------ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL-E-ENPDLITKLKKNTAILRTGLSDIHGLS 391 (483)
Q Consensus 323 -G~i~~~--------~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l-~-~~~~~~~~l~~~~~~l~~~L~~~~~~~ 391 (483)
||++++ +++++.+...... + .+.+.+...++.++++.. + ...+.++.++++.+.+.+.|++++++.
T Consensus 250 iG~~i~~~~~~~~~~~~~~~~~~~~~~~--~-~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~ 326 (409)
T PLN02656 250 LGWFVTTDPSGSFRDPKIVERIKKYFDI--L-GGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCIT 326 (409)
T ss_pred EEEEEEeCcccccccHHHHHHHHHHHhh--h-cCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCc
Confidence 999873 5677766543222 1 123455556666666421 1 113456778888888999998764443
Q ss_pred e-ecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHH
Q 011567 392 I-ASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACES 470 (483)
Q Consensus 392 i-~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~ 470 (483)
. ..+..+.++++.++........+ ..+++.+++++.||.+.++..... ++.+||++.. ++++++++++.
T Consensus 327 ~~~~p~gg~~~w~~l~~~~~~~~~~---~~~~~~~~l~~~gV~v~pg~~fg~-----~~~iRi~~~~--~~e~l~eal~r 396 (409)
T PLN02656 327 CPHKPEGSMAVMVKLNLSLLEDISD---DIDFCFKLAREESVIILPGTAVGL-----KNWLRITFAA--DPSSLEEALGR 396 (409)
T ss_pred CCcCCCeEEEEEEecchhhcCCCCC---HHHHHHHHHHhCCEEEecchhcCC-----CCeEEEEeCC--CHHHHHHHHHH
Confidence 2 23345667777774210000000 123444556677999998754422 3459999984 79999999999
Q ss_pred HHHHHHHHH
Q 011567 471 LKRISAVVL 479 (483)
Q Consensus 471 l~~~~~~~~ 479 (483)
|++++.+..
T Consensus 397 l~~~~~~~~ 405 (409)
T PLN02656 397 IKSFYLRHS 405 (409)
T ss_pred HHHHHHHhc
Confidence 999887654
No 182
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.92 E-value=6.7e-23 Score=215.13 Aligned_cols=340 Identities=16% Similarity=0.206 Sum_probs=220.5
Q ss_pred CCeeEEEeecC--CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh------CC-CCEEEe-c
Q 011567 107 SGKEVVNFASA--NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL------GT-PDSILY-S 176 (483)
Q Consensus 107 ~G~~~id~~s~--~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~------g~-e~~i~~-~ 176 (483)
.|+.+|+|+.+ +.+++..++.+.+++.+.+... .+ |+...-..+|++.||+++ +. ++.|++ +
T Consensus 144 ~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~-~~-------Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~ 215 (517)
T PRK13355 144 AGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDT-EG-------YSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGN 215 (517)
T ss_pred cCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcC-CC-------CCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeC
Confidence 57889999997 4467766788999998887642 21 222223567777787776 32 234444 5
Q ss_pred ccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC-------CCHHHHHHHHHHhhhhhhhccCccEEE
Q 011567 177 YGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTADNKRAKKLRRYI 249 (483)
Q Consensus 177 sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~-------~d~~~Le~~l~~~~~~~~~~~~~~~~i 249 (483)
++++++..++.++.++||.|+++.++|..+...+...|.+++.++. .|++++++.+.. ++++|
T Consensus 216 G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~----------~~k~i 285 (517)
T PRK13355 216 GVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITS----------RTKAI 285 (517)
T ss_pred cHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCc----------CceEE
Confidence 5668888999999999999999999999888888888988877653 156666655432 25566
Q ss_pred EEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---c
Q 011567 250 VVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---G 323 (483)
Q Consensus 250 v~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G 323 (483)
++..++|++|.+.+ +++|+++|++|++++|+||+|...++.. ..........++..-++++||||+++..| |
T Consensus 286 ~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~--~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG 363 (517)
T PRK13355 286 VIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDG--LEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIG 363 (517)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCC--CCcccHHHhCCCCeEEEEecchhhccCcccceE
Confidence 66666889999998 8999999999999999999998665532 11111112223333455699999998766 9
Q ss_pred eee--ccHHH----HHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHH---HHHHHHHHHHHHHhhccCCCceeec
Q 011567 324 FCT--GSARV----VDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDL---ITKLKKNTAILRTGLSDIHGLSIAS 394 (483)
Q Consensus 324 ~i~--~~~~~----~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~---~~~l~~~~~~l~~~L~~~~~~~i~~ 394 (483)
|++ +++++ ++.+.... ...++ .+.....++.++|+..+...+. ..++.++.+++.+.|++++|+.+..
T Consensus 364 ~~i~~~~~~~~~~~~~~l~~~~-~~~~~--~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 440 (517)
T PRK13355 364 WMILSGNKRIAKDYIEGLNMLA-NMRLC--SNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAVK 440 (517)
T ss_pred EEEeeCchhhHHHHHHHHHHHh-cCcCC--cChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCC
Confidence 987 44543 33332211 11122 2344444555555321100111 2344556788888998887888776
Q ss_pred CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 395 NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 395 ~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
+..+.++++.+.........+ .+++..+|++.||.+.++..+... .+..+||++. .++++++++++.|+++
T Consensus 441 p~g~fy~~~~l~~~~~~~~~~----~~~~~~ll~~~gV~v~pg~~F~~~---~~~~~Ris~~--~~~~~l~~a~~rl~~~ 511 (517)
T PRK13355 441 PKAAFYIFPKIDVKKFNIHDD----EQFALDLLHDKKVLIVQGTGFNWD---KPDHFRVVYL--PRLEDLEDAMDRLADF 511 (517)
T ss_pred CCeeeEEEeecCcccCCCCCH----HHHHHHHHHhCCEEEeCcchhCCC---CcCEEEEEeC--CCHHHHHHHHHHHHHH
Confidence 555555666664211000011 245555677789999987543210 1244999984 6899999999999998
Q ss_pred HHHH
Q 011567 475 SAVV 478 (483)
Q Consensus 475 ~~~~ 478 (483)
+...
T Consensus 512 ~~~~ 515 (517)
T PRK13355 512 FSYY 515 (517)
T ss_pred HHHh
Confidence 8653
No 183
>PRK08363 alanine aminotransferase; Validated
Probab=99.92 E-value=7.4e-23 Score=208.52 Aligned_cols=340 Identities=16% Similarity=0.140 Sum_probs=222.8
Q ss_pred CCeeEEEeecCCCC--CCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----C----CCCEEEec
Q 011567 107 SGKEVVNFASANYL--GLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G----TPDSILYS 176 (483)
Q Consensus 107 ~G~~~id~~s~~~l--G~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g----~e~~i~~~ 176 (483)
.|+.++|++.+.+. .+..++.+.+++.+.++.... .|+...-..+|++.+++++ | .++.++.+
T Consensus 28 ~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~-------~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~ 100 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHN-------YYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTA 100 (398)
T ss_pred cCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCC-------CCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeC
Confidence 35689999998653 565678899999888764211 2322233466777777776 3 12445556
Q ss_pred ccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEec-C------CCHHHHHHHHHHhhhhhhhccCccEEE
Q 011567 177 YGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFK-H------NDMDSLRNTLERVTADNKRAKKLRRYI 249 (483)
Q Consensus 177 sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~-~------~d~~~Le~~l~~~~~~~~~~~~~~~~i 249 (483)
++++++..++.+++++||.|+++.++|..+...++..|.+++.++ . .|.+++++.+.. ++++|
T Consensus 101 G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~----------~~~~v 170 (398)
T PRK08363 101 AVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITE----------KTKAI 170 (398)
T ss_pred CHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCc----------ceEEE
Confidence 667899999999999999999999999998888888887776662 2 144555544422 24666
Q ss_pred EEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---c
Q 011567 250 VVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---G 323 (483)
Q Consensus 250 v~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G 323 (483)
++..++|++|.+.+ +++|+++|++||+++|+||+|+...+. +.... ...+......++++||||+++..| |
T Consensus 171 ~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~--~~~~~-~~~~~~~~~vi~~~SfSK~~~~~GlRiG 247 (398)
T PRK08363 171 AVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYE--GKHVS-PGSLTKDVPVIVMNGLSKVYFATGWRLG 247 (398)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccC--CcccC-HHHcCcCCcEEEEecchhccCCccceEE
Confidence 66677889999988 899999999999999999999865442 21111 111222223577899999998777 9
Q ss_pred eeec--cHHHHHHHHhcCC---ceeecCCCcHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHhhccCCCceeecCCC
Q 011567 324 FCTG--SARVVDHQRLSSS---GYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPE 397 (483)
Q Consensus 324 ~i~~--~~~~~~~~~~~~~---~~~fs~~~~p~~~aaa~~al~~l~-~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~ 397 (483)
|+++ ++++++.++.... ...++ .++....++.+++.... ...+..++++++.+.+.+.|.+++++.+..+..
T Consensus 248 ~~~~~~~~~~~~~l~~~~~~~~~~~~~--~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g 325 (398)
T PRK08363 248 YIYFVDPEGKLAEVREAIDKLARIRLC--PNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQG 325 (398)
T ss_pred EEEEeCcHHHHHHHHHHHHHHhccccc--CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCe
Confidence 9886 6665554432211 11122 24444444444443211 112457778888899999998876777654444
Q ss_pred CCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 398 SPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 398 ~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
+.++++.+..... . + ..+++.++++++||.+.++...... .+..+|+++. .++++++++++.|++++++
T Consensus 326 ~~~~~~~l~~~~~-~--~---~~~~~~~~l~~~gV~v~~g~~f~~~---~~~~iRis~~--~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 326 AFYIFPRIEEGPW-K--D---DKEFVLDVLHEAHVLFVHGSGFGEY---GAGHFRLVFL--PPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred EEEEEEEeccCCC-C--C---HHHHHHHHHHhCCEEEeCchhhCCC---CCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 5455556643100 0 1 1234555667789999887543211 1234999985 5789999999999998876
Q ss_pred HH
Q 011567 478 VL 479 (483)
Q Consensus 478 ~~ 479 (483)
.+
T Consensus 395 ~~ 396 (398)
T PRK08363 395 RL 396 (398)
T ss_pred hc
Confidence 43
No 184
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.92 E-value=1.8e-23 Score=210.47 Aligned_cols=230 Identities=16% Similarity=0.191 Sum_probs=181.6
Q ss_pred ChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHh----HhhhcCCeEEEecCCCHHH
Q 011567 152 TIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDS 227 (483)
Q Consensus 152 ~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~----g~~~s~~~v~~~~~~d~~~ 227 (483)
..+.+.+||+++++++|.+++++++||++|+..++.++.++||.|+++...|.+... .+...|.++..++++|+++
T Consensus 38 ~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~ 117 (369)
T cd00614 38 GNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDPEA 117 (369)
T ss_pred CChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCHHH
Confidence 457889999999999999999999999999999999999999999999888877553 3446678888899989888
Q ss_pred HHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCce
Q 011567 228 LRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKI 307 (483)
Q Consensus 228 Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~ 307 (483)
+++.+++ ++++|++|++++++|.+.|+++|+++|++||+++|+|++++.+.+.. . .. ..+
T Consensus 118 l~~~i~~----------~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~~---~----~~---~g~ 177 (369)
T cd00614 118 LEAAIKP----------ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQR---P----LE---LGA 177 (369)
T ss_pred HHHhcCC----------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcCC---h----hh---hCC
Confidence 8877743 26899999999999999999999999999999999999998664321 1 11 234
Q ss_pred eEEEccccccccC----CCceeeccH-HHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Q 011567 308 DIVTAAMGHALAT----EGGFCTGSA-RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRT 382 (483)
Q Consensus 308 Di~~~s~~K~lg~----~GG~i~~~~-~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~ 382 (483)
|+++.|++|.+++ .||++++++ ++++.++.... .++..++|..++++...++.+ +..+++..+++.++.+
T Consensus 178 Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~g~~~~p~~a~~~l~~l~tl---~~r~~~~~~na~~la~ 252 (369)
T cd00614 178 DIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRL--ALGTILSPFDAWLLLRGLKTL---PLRMERHSENALKVAE 252 (369)
T ss_pred cEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHH--hhCCCCCHHHHHHHHcCCCCH---HHHHHHHHHHHHHHHH
Confidence 8999999999973 368998877 78777764422 245567888887776666533 4578888999999999
Q ss_pred hhccCCCceee-c----------------CCCCCEEEEEec
Q 011567 383 GLSDIHGLSIA-S----------------NPESPIVFLILE 406 (483)
Q Consensus 383 ~L~~~~~~~i~-~----------------~~~~~i~~l~l~ 406 (483)
.|++.+++.-+ - ...++++.+.++
T Consensus 253 ~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~ 293 (369)
T cd00614 253 FLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELK 293 (369)
T ss_pred HHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeC
Confidence 99887654211 1 124778888885
No 185
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.92 E-value=4.4e-22 Score=207.23 Aligned_cols=341 Identities=14% Similarity=0.118 Sum_probs=219.0
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC--------CCCEEEecccHHHHHhhhhhhc-cCCcEE
Q 011567 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG--------TPDSILYSYGLSTMFSAIPCFC-KKGDLI 196 (483)
Q Consensus 126 p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g--------~e~~i~~~sG~~a~~~ai~~~~-~~gdiI 196 (483)
..+.+++.+.++..+.+. ..|+...-..+|++.+|++++ .++.++.+++++++..++.++. .+||.|
T Consensus 91 ~~~~~~~~~~~~~~~~~~----~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~V 166 (481)
T PTZ00377 91 ADVVARAKEYLNAIGGGT----GAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGV 166 (481)
T ss_pred HHHHHHHHHHHHhCCCcc----cCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEE
Confidence 366777776666543211 223333334566666666653 1344455666788999999998 799999
Q ss_pred EEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC---hHH
Q 011567 197 VADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP---LDE 266 (483)
Q Consensus 197 ~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~---L~~ 266 (483)
+++.++|..+...++..|.+++.++.+ |+++|++.++....+ ..+++++++..++|++|.+.+ +++
T Consensus 167 lv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~----~~~~k~l~l~~P~NPTG~~~s~e~~~~ 242 (481)
T PTZ00377 167 MIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRN----GITPRALVVINPGNPTGQVLTRDVMEE 242 (481)
T ss_pred EECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhc----CCCeeEEEEECCCCCCCcCCCHHHHHH
Confidence 999999999999999999888777532 568888877543211 012455555566889999998 899
Q ss_pred HHHHHHHcCcEEEEeCccccccccCCCCccc---cc-cCCCCC----ceeEEEccccccc-cCCC---ceeec---cHHH
Q 011567 267 LIRLKEKYRFRVFLDESNSFGVLGRSGRGLT---EH-CGVPVD----KIDIVTAAMGHAL-ATEG---GFCTG---SARV 331 (483)
Q Consensus 267 l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~---~~-~~v~~~----~~Di~~~s~~K~l-g~~G---G~i~~---~~~~ 331 (483)
|+++|++|++++|+||+|...++.. +.... .. .++.++ ..-|+++||||++ +.+| ||+++ ++++
T Consensus 243 i~~~a~~~~~~iI~De~Y~~l~~~~-~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~l 321 (481)
T PTZ00377 243 IIKFCYEKGIVLMADEVYQENIYDG-EKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEV 321 (481)
T ss_pred HHHHHHHCCCEEEEehhhHhhccCC-CCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHH
Confidence 9999999999999999998655521 11111 10 122221 1247789999985 5444 99875 8888
Q ss_pred HHHHHhcCCceeecCCCcHHHHHHHHHHHHH-----------HhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCE
Q 011567 332 VDHQRLSSSGYVFSASLPPYLASAAITAIDV-----------LEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPI 400 (483)
Q Consensus 332 ~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~-----------l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i 400 (483)
++.+...... ..+ .++....++.++++. ..+...+++.++++.+.+.+.|++++|+.+..+..+.+
T Consensus 322 i~~l~~~~~~-~~~--~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~f 398 (481)
T PTZ00377 322 REQIYKLASI-NLC--SNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMY 398 (481)
T ss_pred HHHHHHHhhe-ecC--CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEE
Confidence 8877654322 222 345555555555531 11112334456788888999998887888775545666
Q ss_pred EEEEecCCCCCchhhH----HHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 401 VFLILEKSTGSMKNDL----QLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 401 ~~l~l~~~~~~~~~~~----~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
+++.+..+........ .....++..++++.||.+.++....... ....+|+++. .+++++++++++|+++++
T Consensus 399 l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~--~~~~~Rls~~--~~~e~l~~~l~rl~~~~~ 474 (481)
T PTZ00377 399 AFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKP--GTYHFRITIL--PPEEQIEEMVKKIKEFHE 474 (481)
T ss_pred EEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCC--CCCEEEEEEC--CCHHHHHHHHHHHHHHHH
Confidence 6655532111000000 0012345567777899999876443211 1235999986 678999999999999999
Q ss_pred HHHhcC
Q 011567 477 VVLRDR 482 (483)
Q Consensus 477 ~~~~~~ 482 (483)
+..+|.
T Consensus 475 ~~~~~~ 480 (481)
T PTZ00377 475 SFMKKY 480 (481)
T ss_pred HHHHhh
Confidence 988764
No 186
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.92 E-value=5.2e-22 Score=203.03 Aligned_cols=341 Identities=16% Similarity=0.177 Sum_probs=226.7
Q ss_pred CCeeEEEeecCCCC-C--CCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC--------------
Q 011567 107 SGKEVVNFASANYL-G--LIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT-------------- 169 (483)
Q Consensus 107 ~G~~~id~~s~~~l-G--~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~-------------- 169 (483)
+|+.+|||..++.- . +...+.+.+++.+.++..... .|+...-..+|++.+|++++.
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~------~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~ 104 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECN------GYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKK 104 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCC------CCCCCCCcHHHHHHHHHHHHhhccccccccCCCCh
Confidence 67789999998542 1 335678888888877751110 122222245677777776641
Q ss_pred CCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhc
Q 011567 170 PDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRA 242 (483)
Q Consensus 170 e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~ 242 (483)
++.++.+++++++..++.+++++||.|+++.++|..+...++..|.++..++.. |+++|++.++.
T Consensus 105 ~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~-------- 176 (412)
T PTZ00433 105 DNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDD-------- 176 (412)
T ss_pred hhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhcc--------
Confidence 344555666799999999999999999999999988888888889888777532 45666655432
Q ss_pred cCccEEEEEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEcccccccc
Q 011567 243 KKLRRYIVVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA 319 (483)
Q Consensus 243 ~~~~~~iv~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg 319 (483)
.+++|++...+|++|.+.+ +++|+++|++||+++|+||+|....++. .-........+...-++++||||.+|
T Consensus 177 --~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~~ 252 (412)
T PTZ00433 177 --RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNG--ATFTSVADFDTTVPRVILGGTAKNLV 252 (412)
T ss_pred --CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCC--CCccchhhccCCCceEEEccchhhcC
Confidence 2566677777889999877 7888999999999999999998655432 11111112221222478899999998
Q ss_pred CCC---ceeec------cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHH-Hh-cCcHHHHHHHHHHHHHHHhhccCC
Q 011567 320 TEG---GFCTG------SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDV-LE-ENPDLITKLKKNTAILRTGLSDIH 388 (483)
Q Consensus 320 ~~G---G~i~~------~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~-l~-~~~~~~~~l~~~~~~l~~~L~~~~ 388 (483)
.+| ||+++ .+++++.++.... ..+ +.+++...++.+++.. .+ ...+.++.++++.+.+.+.|++..
T Consensus 253 ~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~-~~~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 329 (412)
T PTZ00433 253 VPGWRLGWLLLVDPHGNGGDFLDGMKRLGM-LVC--GPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECI 329 (412)
T ss_pred CCCeeEEEEEEeCCcccHHHHHHHHHHHhh-ccC--CCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 777 99885 2456666554321 122 3356655555555542 11 113466778888888999998765
Q ss_pred CceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHH
Q 011567 389 GLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKAC 468 (483)
Q Consensus 389 ~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~ 468 (483)
++.+..+..+.++++.++...-. +.....++++.+++++||.+.++..... ++.+|+++.. .++++++++
T Consensus 330 ~~~~~~p~gg~f~~~~l~~~~~~---~~~~~~~~~~~ll~~~gV~v~pg~~f~~-----~~~iRis~~~--~~e~l~~al 399 (412)
T PTZ00433 330 GLSPTMPRGSMFLMSRLDLEKFR---DIKSDVEFYEKLLEEENVQVLPGEIFHM-----PGFTRLTISR--PVEVLREAV 399 (412)
T ss_pred CCcccCCCeeEEEEEEechhhcC---CCCCHHHHHHHHHHhcCEEEeCccccCC-----CCeEEEEecC--CHHHHHHHH
Confidence 67665555677888887431000 0001235777777667999988754332 3459999974 588999999
Q ss_pred HHHHHHHHHH
Q 011567 469 ESLKRISAVV 478 (483)
Q Consensus 469 ~~l~~~~~~~ 478 (483)
+.|.++++..
T Consensus 400 ~~l~~~~~~~ 409 (412)
T PTZ00433 400 ERIKAFCERH 409 (412)
T ss_pred HHHHHHHHHh
Confidence 9999988754
No 187
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.92 E-value=3.6e-22 Score=203.34 Aligned_cols=339 Identities=15% Similarity=0.153 Sum_probs=219.1
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC-----CCEEEe-cccHH
Q 011567 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT-----PDSILY-SYGLS 180 (483)
Q Consensus 107 ~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~-----e~~i~~-~sG~~ 180 (483)
.|++++||..+.. .+...+.+.+++.+.+... ...+ ...|..++...+++.+.+.+|. ++.++. +++.+
T Consensus 27 ~~~~~i~l~~~~p-~~~~~~~~~~~~~~~~~~~-~~Y~---~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~ 101 (396)
T PRK09147 27 ADLPPISLSIGEP-KHPTPAFIKDALAANLDGL-ASYP---TTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSRE 101 (396)
T ss_pred cCCCeEecCCCCC-CCCCCHHHHHHHHHHhhhh-cCCC---CCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHH
Confidence 3778999998743 2324577888887765431 1111 1234444444444444444463 234555 55568
Q ss_pred HHHhhhhhhccC---CcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEE
Q 011567 181 TMFSAIPCFCKK---GDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIV 250 (483)
Q Consensus 181 a~~~ai~~~~~~---gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv 250 (483)
++..++++++++ ||.|+++.+++..+...+...|.+++.++.+ |++.+++.+.+ ++++++
T Consensus 102 al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~----------~~k~i~ 171 (396)
T PRK09147 102 ALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWA----------RTQLLF 171 (396)
T ss_pred HHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhh----------ccEEEE
Confidence 888999999999 9999999999988888888889888887642 45666554432 255666
Q ss_pred EecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCcc--cc---ccCCCCCceeEEEccccccccCCC
Q 011567 251 VEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGL--TE---HCGVPVDKIDIVTAAMGHALATEG 322 (483)
Q Consensus 251 ~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~--~~---~~~v~~~~~Di~~~s~~K~lg~~G 322 (483)
+...+|++|.+.+ +++|+++|++|+++||+||+|+...+....... .. ..+.+..+..|+++||||.++.+|
T Consensus 172 l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G 251 (396)
T PRK09147 172 VCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPG 251 (396)
T ss_pred EcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCcc
Confidence 6677899999997 788999999999999999999876553210111 10 011111134588999999998777
Q ss_pred ---ceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCC
Q 011567 323 ---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESP 399 (483)
Q Consensus 323 ---G~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~ 399 (483)
||+++++++++.+....... +.+.++....++.+++..-....+.++.++++.+.+.+.|++. +.+..+..+.
T Consensus 252 lRiG~~~~~~~l~~~~~~~~~~~--~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~~g~ 327 (396)
T PRK09147 252 LRSGFVAGDAALLKKFLLYRTYH--GCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV--LDVQLPDAGF 327 (396)
T ss_pred ceeeeecCCHHHHHHHHHHhhhc--ccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh--cCCCCCCeeE
Confidence 99999999988775432211 2234555555555555321111345667777777787777663 3443345677
Q ss_pred EEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccccc---CCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 400 IVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDK---CRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 400 i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~---~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
++++.++. + ..++++.+++++||.+.++....... ....+.+||++.. +++++++++++|++++.
T Consensus 328 f~~~~~~~-------~---~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~--~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 328 YLWAKVPG-------D---DTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA--PLAECVEAAERIVDFCR 395 (396)
T ss_pred EEEEECCC-------C---HHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHhc
Confidence 88888741 1 13566776766799999875433210 0112459999874 68899999999988763
No 188
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.92 E-value=4.4e-22 Score=202.87 Aligned_cols=338 Identities=17% Similarity=0.182 Sum_probs=214.7
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC-------CCCEEEecccHH
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG-------TPDSILYSYGLS 180 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g-------~e~~i~~~sG~~ 180 (483)
|..++||..+.. .+...+.+.+++.+..... . .|+...-..++++.++++++ .++.++.++|++
T Consensus 29 ~~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~-~-------~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~ 99 (397)
T PRK07568 29 GIKVYHLNIGQP-DIKTPEVFFEAIKNYDEEV-L-------AYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSE 99 (397)
T ss_pred CCCEEEecCCCC-CCCCCHHHHHHHHHHhcCC-c-------CcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHH
Confidence 345788887643 2223467777766554321 1 12222234567777777762 234556677789
Q ss_pred HHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC--------CHHHHHHHHHHhhhhhhhccCccEEEEEe
Q 011567 181 TMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN--------DMDSLRNTLERVTADNKRAKKLRRYIVVE 252 (483)
Q Consensus 181 a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~--------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e 252 (483)
++..++.++.++||.|++..++|..+...++..|.+++.++.+ |+++|++.+++ ++++|++.
T Consensus 100 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~----------~~~~v~i~ 169 (397)
T PRK07568 100 AILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITP----------KTKAILIS 169 (397)
T ss_pred HHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCc----------cceEEEEE
Confidence 9999999999999999998888777766677778888777642 23555554422 25666666
Q ss_pred cccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCC-CceeEEEccccccccCCC---cee
Q 011567 253 AVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPV-DKIDIVTAAMGHALATEG---GFC 325 (483)
Q Consensus 253 ~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~-~~~Di~~~s~~K~lg~~G---G~i 325 (483)
.+.+++|.+.+ +++|.++|++||+++|+||+|+...+. +........... .+..+++.|+||.+|..| ||+
T Consensus 170 ~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~--~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~ 247 (397)
T PRK07568 170 NPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYD--GLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCL 247 (397)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccC--CCCccChhhcCCCcCCEEEEecchhhccCCCcceEEE
Confidence 67888999887 788999999999999999999865432 221111111111 223588899999998655 888
Q ss_pred ec-cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEE
Q 011567 326 TG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFL 403 (483)
Q Consensus 326 ~~-~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~-~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l 403 (483)
++ ++++++.+...... .++ .+++...++..+++..+ ...+.++.++++.+.+.+.|++++++.+..+..+.++++
T Consensus 248 ~~~~~~~~~~~~~~~~~-~~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~ 324 (397)
T PRK07568 248 ISKNKELIAAAMKLCQA-RLS--PPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIA 324 (397)
T ss_pred ecCCHHHHHHHHHHhhc-cCC--CCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEE
Confidence 87 46777765433221 222 24444444444554211 113466778888899999998876766554445556677
Q ss_pred EecCCCCCchhhHHHHHHHHHHHHHh-----CCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 404 ILEKSTGSMKNDLQLLEDIADWALKE-----DGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 404 ~l~~~~~~~~~~~~~~~~i~~~~l~~-----~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
.++.. + ..++++.++++ .||.+.++..........+..+|+++. .++++++++++.|++++++.
T Consensus 325 ~l~~~------~---~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~--~~~~~~~~~~~~l~~~l~~~ 393 (397)
T PRK07568 325 KLPVD------D---AEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV--LNEEDLKRAMEILKEALEKY 393 (397)
T ss_pred ecCCC------C---HHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe--CCHHHHHHHHHHHHHHHHHh
Confidence 76421 1 22455555543 589998875332111111235999986 46899999999999999876
Q ss_pred Hh
Q 011567 479 LR 480 (483)
Q Consensus 479 ~~ 480 (483)
.+
T Consensus 394 ~~ 395 (397)
T PRK07568 394 NK 395 (397)
T ss_pred hc
Confidence 54
No 189
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.92 E-value=3.5e-22 Score=200.36 Aligned_cols=290 Identities=18% Similarity=0.254 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHhhhCCCC---EE-EecccHHHHHhhhhhhccCCc-EEEEcCCchhH-HHhHhhhcCCeEEEecCC----
Q 011567 154 DVHLDCEARIAKFLGTPD---SI-LYSYGLSTMFSAIPCFCKKGD-LIVADEGVHWG-IQNGLYLSRSTVVYFKHN---- 223 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~---~i-~~~sG~~a~~~ai~~~~~~gd-iI~~~~~~h~s-~~~g~~~s~~~v~~~~~~---- 223 (483)
+...++++.+++++|.+. .+ +.++|++++..++..+..++| +|+.+.++|+. ....+...|.+++.++.+
T Consensus 31 ~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~~~ 110 (355)
T TIGR03301 31 DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGERLAKICEYLGIPHTDLNFSEYEP 110 (355)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhHHHHHHHHcCCceEEEecCCCCC
Confidence 678899999999999752 34 568999999999998877766 46666666655 344555667777766532
Q ss_pred -CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCC
Q 011567 224 -DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGV 302 (483)
Q Consensus 224 -d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v 302 (483)
|++++++.+++.. ..++++...+.+.+|.+.|+++|.++|++||+++|+|+++++|..+ +.+
T Consensus 111 ~d~~~l~~~l~~~~--------~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~---------~~~ 173 (355)
T TIGR03301 111 PDLNRIEEALAADP--------DITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIP---------IDI 173 (355)
T ss_pred CCHHHHHHHHHhCC--------CceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcc---------cch
Confidence 6788888776521 2456666667777899999999999999999999999999876432 222
Q ss_pred CCCceeEEEccccccc-cCCC-ceeeccHHHHHHHHhcCCcee---------------ecCCCcHHHHHHHHHHHHHHhc
Q 011567 303 PVDKIDIVTAAMGHAL-ATEG-GFCTGSARVVDHQRLSSSGYV---------------FSASLPPYLASAAITAIDVLEE 365 (483)
Q Consensus 303 ~~~~~Di~~~s~~K~l-g~~G-G~i~~~~~~~~~~~~~~~~~~---------------fs~~~~p~~~aaa~~al~~l~~ 365 (483)
...++|++++|++|++ |+.| ||+++++++++.++....++. +..+.++....++.++++.+.+
T Consensus 174 ~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~ 253 (355)
T TIGR03301 174 EELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEA 253 (355)
T ss_pred hhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 2235689999999998 4555 899999998887653211111 1113456666777778887743
Q ss_pred C---cHHHHHHHHHHHHHHHhhccCCCceeecCC--CCC-EEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecc
Q 011567 366 N---PDLITKLKKNTAILRTGLSDIHGLSIASNP--ESP-IVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKR 439 (483)
Q Consensus 366 ~---~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~--~~~-i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~ 439 (483)
. ++..++++++.+++++.|+++ |+++..+. .++ ++++.++... .....++.+.+ .++||.+.+...
T Consensus 254 ~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l-~~~gi~i~~~~~ 325 (355)
T TIGR03301 254 EGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVSFLYPDDP------DFDFDDFYQEL-KERGFVIYPGKL 325 (355)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEEEEECCCCC------cchHHHHHHHH-HHCCEEEECCcc
Confidence 2 557788899999999999886 77754332 233 4556653210 01123566664 456999987532
Q ss_pred cccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 440 SMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 440 ~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
.. .+.|||+++..+|++|++++++.|+++
T Consensus 326 ~~------~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 326 TL------ADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred cc------ccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 11 145999998889999999999999875
No 190
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.92 E-value=4.6e-22 Score=199.19 Aligned_cols=323 Identities=13% Similarity=0.139 Sum_probs=214.7
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----C--C-CC-EEEe-cccHHH
Q 011567 111 VVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G--T-PD-SILY-SYGLST 181 (483)
Q Consensus 111 ~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g--~-e~-~i~~-~sG~~a 181 (483)
++||++++. .+...|.+.+++.+..... . .|+...-..+|++.+++++ | . ++ .++. ++++++
T Consensus 2 ~~~~~~g~p-~~~~~~~~~~~~~~~~~~~--~------~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~a 72 (350)
T TIGR03537 2 LFDFGTGDP-KEPTPPFIRKALIDAVPEV--S------QYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEA 72 (350)
T ss_pred eEeccCCCC-CCCCCHHHHHHHHHHHhcc--C------CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence 678888754 3434678888887765431 1 1211111345555555554 5 2 22 4555 455688
Q ss_pred HHhhhhhhccCC---cEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEE
Q 011567 182 MFSAIPCFCKKG---DLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVV 251 (483)
Q Consensus 182 ~~~ai~~~~~~g---diI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~ 251 (483)
+..++.+++++| |.|+++.++|..+...+...|.+++.++.+ |++++++.+.+ .++++++
T Consensus 73 i~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~----------~~~~i~i 142 (350)
T TIGR03537 73 IFHFPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILE----------ETKIVWI 142 (350)
T ss_pred HHHHHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhh----------ccEEEEE
Confidence 888888898877 699999999999999999999999887642 56667666543 2566777
Q ss_pred ecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---cee
Q 011567 252 EAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFC 325 (483)
Q Consensus 252 e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i 325 (483)
.+.+|++|.+.| +++|+++|++||+++|+||+|+...++.....+ .... .+..++++|+||++|..| ||+
T Consensus 143 ~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~---~~~~-~~~~i~~~s~SK~~g~~GlRiG~~ 218 (350)
T TIGR03537 143 NYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSA---LEVG-IENVLAFHSLSKRSGMTGYRSGFV 218 (350)
T ss_pred eCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCch---hhcC-cCCEEEEeecccccCCccccceee
Confidence 778899999998 899999999999999999999865444311111 1112 223688899999998666 999
Q ss_pred eccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEe
Q 011567 326 TGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLIL 405 (483)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l 405 (483)
++++++.+.++.....+ +.+.++...+++.+++..-....+.+++++++.+.+.+.|++. |+.+..+..+.++++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~~~~g~~~~~~~~ 295 (350)
T TIGR03537 219 AGDEKLISFLRKLRANF--GVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV-GLEYLYPDATFYLWVKV 295 (350)
T ss_pred ecCHHHHHHHHHHHHhh--ccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeEEEEEEEC
Confidence 99998888776543332 3333445545554554311111346777888888898888876 77665444455677777
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHH
Q 011567 406 EKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 406 ~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
+... ...++++.+++ +||.+.++...... .++.+|+++. .++++++++++.+++
T Consensus 296 ~~~~--------~~~~l~~~L~~-~gv~v~~g~~f~~~---~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 296 PSGI--------DAKDYALRLLE-NGIVVAPGENFGSG---EEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred CCCC--------CHHHHHHHHHH-CCEEEcCchhhCCC---CCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 4321 12356776555 69999876543211 1245999874 578999999988864
No 191
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.92 E-value=2.9e-22 Score=204.41 Aligned_cols=339 Identities=17% Similarity=0.162 Sum_probs=225.9
Q ss_pred CeeEEEeecCCCC---CCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC--------CCEEEec
Q 011567 108 GKEVVNFASANYL---GLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT--------PDSILYS 176 (483)
Q Consensus 108 G~~~id~~s~~~l---G~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~--------e~~i~~~ 176 (483)
|++++||..+++- .+...+.+.+++.+.++..... .|+...-..++++.++++++. ++.++.+
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~ 103 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFN------GYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTS 103 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCC------CCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEec
Confidence 6688999988542 3445688888888887642111 233333356788888888873 3456667
Q ss_pred ccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEE
Q 011567 177 YGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYI 249 (483)
Q Consensus 177 sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~i 249 (483)
++++++..++.+++.+||.|+++.+.|......+...|.+++.++.. |++++++.+.. .++++
T Consensus 104 G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----------~~~~v 173 (403)
T TIGR01265 104 GCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADE----------KTVAI 173 (403)
T ss_pred ChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCc----------CccEE
Confidence 77899999999999999999999999888777777778887766431 45666655422 24556
Q ss_pred EEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---c
Q 011567 250 VVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---G 323 (483)
Q Consensus 250 v~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G 323 (483)
++..+++++|.+.+ +++|+++|++||+++|+||+|+...++. ........+.+...-|+++||||.++.+| |
T Consensus 174 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG 251 (403)
T TIGR01265 174 VVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGD--APFIPMASFASIVPVLSLGGISKRWVVPGWRLG 251 (403)
T ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC--CCccchhhhccCCcEEEEeecccccCCCcceEE
Confidence 66666788999987 8999999999999999999998765432 11111112222223578899999988666 9
Q ss_pred eeecc--HH-----HHHHHHhcCCceeecCCCcHHHHHHHHHHHHH-Hh-cCcHHHHHHHHHHHHHHHhhccCCCceeec
Q 011567 324 FCTGS--AR-----VVDHQRLSSSGYVFSASLPPYLASAAITAIDV-LE-ENPDLITKLKKNTAILRTGLSDIHGLSIAS 394 (483)
Q Consensus 324 ~i~~~--~~-----~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~-l~-~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~ 394 (483)
|+++. ++ +.+.+..... ... +.+++...++.++++. .+ ...+.+++++++.+.+.+.|+..+++.+..
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 328 (403)
T TIGR01265 252 WIIIHDPHGIFRDTVLQGLKNLLQ-RIL--GPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPK 328 (403)
T ss_pred EEEEeCchhhhHHHHHHHHHHHhh-hhc--CCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecC
Confidence 98763 22 3333322211 111 2345555555555542 11 113467778888888999998876777655
Q ss_pred CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 395 NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 395 ~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
+..++++++.++..... +.....+++..++++.||.+.++..... +..+||++.. .++.+++++++|+++
T Consensus 329 p~~g~f~~~~~~~~~~~---~~~~~~~~~~~l~~~~gv~v~pg~~f~~-----~~~iRis~~~--~~~~l~~~l~~l~~~ 398 (403)
T TIGR01265 329 PEGAMYLMVKLELELFP---EIKDDVDFCEKLVREESVICLPGSAFGL-----PNWVRITITV--PESMLEEACSRIKEF 398 (403)
T ss_pred CCceeEEEEeccccccC---CCCCHHHHHHHHHHhCCEEEeCccccCC-----CCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 56788888887532100 0001235677767778999998765432 3459999874 588999999999888
Q ss_pred HHH
Q 011567 475 SAV 477 (483)
Q Consensus 475 ~~~ 477 (483)
+.+
T Consensus 399 ~~~ 401 (403)
T TIGR01265 399 CER 401 (403)
T ss_pred HHh
Confidence 754
No 192
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=3.3e-22 Score=200.52 Aligned_cols=318 Identities=16% Similarity=0.145 Sum_probs=218.9
Q ss_pred CeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC--CEEEecccHHHHHh
Q 011567 108 GKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFS 184 (483)
Q Consensus 108 G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e--~~i~~~sG~~a~~~ 184 (483)
++++|||.++ +.++ .+|.+.+++.+.+...-. .|... -..+|++.+|++++.+ +.++.+++++++..
T Consensus 23 ~~~~i~l~~~~~~~~--~~~~~~~a~~~~~~~~~~-------~y~~~-~~~~lr~aia~~~~~~~~~I~it~G~~~al~~ 92 (353)
T PRK05387 23 LAKLIKLNTNENPYP--PSPKVLEAIRAALGDDLR-------LYPDP-NADALRQAIAAYYGLDPEQVFVGNGSDEVLAH 92 (353)
T ss_pred ccceeeccCCCCCCC--CCHHHHHHHHHHhhhhhh-------cCCCC-cHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHH
Confidence 4578999998 4443 357889998877664111 12222 2368999999999853 44555666788999
Q ss_pred hhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCC
Q 011567 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSG 259 (483)
Q Consensus 185 ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G 259 (483)
++++++++||.|+++.++|..+....+..|.+++.++.. |+++++ +. +++|++...++++|
T Consensus 93 ~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~---~~-----------~~~v~~~~P~NPtG 158 (353)
T PRK05387 93 AFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYL---RP-----------NGGIIFPNPNAPTG 158 (353)
T ss_pred HHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHH---hc-----------CCEEEEeCCCCCCC
Confidence 999999999999999999987777778888888777643 344432 11 34566666789999
Q ss_pred CccChHHHHHHHHHc-CcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHH
Q 011567 260 QIAPLDELIRLKEKY-RFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQ 335 (483)
Q Consensus 260 ~i~~L~~l~~l~~k~-~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~ 335 (483)
.+.|.+++.++++++ ++++|+||+|.. ++. .......+. .+.+++++||||++|..| ||+++++++++.+
T Consensus 159 ~~~~~~~~~~l~~~~~~~~livDe~y~~--~~~--~~~~~~~~~--~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l 232 (353)
T PRK05387 159 IALPLAEIERILAANPDSVVVIDEAYVD--FGG--ESAIPLIDR--YPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEAL 232 (353)
T ss_pred CCCCHHHHHHHHHhCCCcEEEEeCcccc--cCC--cchHHHHhh--CCCEEEEEehhHhhcchhhhceeeecCHHHHHHH
Confidence 999999999999887 999999999964 221 111111111 233789999999998777 9999999998887
Q ss_pred HhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 011567 336 RLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 415 (483)
Q Consensus 336 ~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~ 415 (483)
+.....+ .+.+.++....++.++++..+..++.+++++++.+.+.+.|++. |+.+. ++.++++++.++.. +
T Consensus 233 ~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~------~ 303 (353)
T PRK05387 233 NRVKNSF-NSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL-GFEVL-PSKANFVFARHPSH------D 303 (353)
T ss_pred HHhhccC-CCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCcCcEEEEECCCC------C
Confidence 6543222 12234555555555566422222356778888899999999886 77765 34677777765321 1
Q ss_pred HHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 416 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 416 ~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
..++++.+. ++||.+.....+. .+..+|+++. +++++++++++|++++.
T Consensus 304 ---~~~~~~~l~-~~gi~v~~~~~~~-----~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 304 ---AAELAAKLR-ERGIIVRHFNKPR-----IDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred ---HHHHHHHHH-HCCEEEEECCCCC-----CCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 235666654 5699997432211 1245999985 78999999999998754
No 193
>PRK07550 hypothetical protein; Provisional
Probab=99.92 E-value=8.6e-22 Score=199.91 Aligned_cols=338 Identities=14% Similarity=0.134 Sum_probs=218.5
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC---CCEEEe-cccHHHHH
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT---PDSILY-SYGLSTMF 183 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~---e~~i~~-~sG~~a~~ 183 (483)
|+..+||.+++. .+...+.+.+++.+.+...... ......|..++...+++.+.+..|. ++.+++ +++++++.
T Consensus 28 ~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~ 104 (386)
T PRK07550 28 DGPLIDLSQAVP-GYPPPPELLRALAEAAADPAAH--LYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFW 104 (386)
T ss_pred CCCeEEeCCCCC-CCCCCHHHHHHHHHHHhCcCCc--CCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 456799998853 2334677888877776431111 1111234444455555555544442 244555 55568888
Q ss_pred hhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEEecccC
Q 011567 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQ 256 (483)
Q Consensus 184 ~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~ 256 (483)
.++.+++++||.|+++.+.|......++..|.+++.++.+ |.+++++.+++ .+++|++..+.+
T Consensus 105 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~----------~~~~v~~~~P~N 174 (386)
T PRK07550 105 AAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITP----------RTRAIALVTPNN 174 (386)
T ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcc----------cCcEEEEeCCCC
Confidence 8999999999999999999988887888889988877652 56667776643 134444445678
Q ss_pred CCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCC-CCCceeEEEccccccccCCC---ceeeccH
Q 011567 257 NSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGV-PVDKIDIVTAAMGHALATEG---GFCTGSA 329 (483)
Q Consensus 257 ~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v-~~~~~Di~~~s~~K~lg~~G---G~i~~~~ 329 (483)
++|.+.+ +++|+++|++||+++|+||+|+....+. +.. ...+.. ...+..++++|+||++|..| ||+++++
T Consensus 175 PtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~-~~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~ 252 (386)
T PRK07550 175 PTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGG-GAP-HDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASP 252 (386)
T ss_pred CCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCC-CCC-cchhhCCCccccEEEEecchhhccCcccceEeeecCH
Confidence 8999887 7899999999999999999998654321 111 111111 11233577899999998555 9999999
Q ss_pred HHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCC
Q 011567 330 RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEEN-PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKS 408 (483)
Q Consensus 330 ~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~-~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~ 408 (483)
++++.++........+ .+.....++..+++.+++. .+.++.++++.+.+.+.|.+..++.+. +..+.++++.+...
T Consensus 253 ~~~~~~~~~~~~~~~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~g~~~~~~~~~~~ 329 (386)
T PRK07550 253 ARIAEIEKFMDTVAIC--APRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWELL-ASGAYFAYVRHPFP 329 (386)
T ss_pred HHHHHHHHHHhhcccC--CCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceeC-CCceEEEEecCCCC
Confidence 8887776543332222 2444444444555433221 245677888888899999876566554 33566677766431
Q ss_pred CCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 409 TGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 409 ~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
. ....+++..+++++||.+.++...... ....+||+++. .++++++++++.|+++
T Consensus 330 ~-------~~~~~l~~~l~~~~gv~v~pg~~f~~~---~~~~iRis~~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 330 D-------RPSREVARRLAKEAGILCLPGTMFGPG---QEGYLRLAFAN-ADVAGIGELVERLRAF 384 (386)
T ss_pred C-------CCHHHHHHHHHHhcCEEEeCchhhCCC---CCCEEEEEeec-CCHHHHHHHHHHHHhh
Confidence 1 013357777777779999987543210 12359999953 5799999999999865
No 194
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.92 E-value=6.4e-22 Score=203.11 Aligned_cols=353 Identities=17% Similarity=0.185 Sum_probs=231.8
Q ss_pred CCeeEEEeecCCC-CCCCCCh---HHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHH
Q 011567 107 SGKEVVNFASANY-LGLIGHE---KLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTM 182 (483)
Q Consensus 107 ~G~~~id~~s~~~-lG~~~~p---~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~ 182 (483)
.|..++++..+.. ..+..++ .+.++..+++..... .|+...-..+|+++++++++.+.++++++|++|+
T Consensus 34 ~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~-------~Y~~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~ 106 (460)
T PRK13238 34 AGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDE-------AYAGSRSYYRLEDAVKDIFGYPYTIPTHQGRAAE 106 (460)
T ss_pred cCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCc-------ccCCCCCHHHHHHHHHHHhCCCcEEECCCHHHHH
Confidence 4667888888754 3554433 477888877764212 2333444688999999999999999999999999
Q ss_pred HhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC---------------CCHHHHHHHHHHhhhhhhhccCccE
Q 011567 183 FSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH---------------NDMDSLRNTLERVTADNKRAKKLRR 247 (483)
Q Consensus 183 ~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~---------------~d~~~Le~~l~~~~~~~~~~~~~~~ 247 (483)
..++.++.++|| |+...+.+.++...+.+.|.+++.++. -|+++|++.+.+... .+++
T Consensus 107 ~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~------~~tk 179 (460)
T PRK13238 107 QILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA------ENVP 179 (460)
T ss_pred HHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCC------Ccee
Confidence 999999999999 777777666666777888887776543 367788888765321 2478
Q ss_pred EEEEecccCCCC-CccC---hHHHHHHHHHcCcEEEEeCccccc-c-ccC------CCCccccccCCCCCceeEEEcccc
Q 011567 248 YIVVEAVYQNSG-QIAP---LDELIRLKEKYRFRVFLDESNSFG-V-LGR------SGRGLTEHCGVPVDKIDIVTAAMG 315 (483)
Q Consensus 248 ~iv~e~v~~~~G-~i~~---L~~l~~l~~k~~~~li~DEa~s~g-~-lg~------~G~g~~~~~~v~~~~~Di~~~s~~ 315 (483)
+|+++.+.|++| .+.+ |++|+++|++||+++|.|+++..+ . +.. .+..+.+..-..-.-.|+++.|..
T Consensus 180 ~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~ 259 (460)
T PRK13238 180 FIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAK 259 (460)
T ss_pred EEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecc
Confidence 888888888876 6666 689999999999999999988542 1 111 111111100000012378888888
Q ss_pred ccc-cCCCceeecc-HHHHHHHHhcC---Cce-eecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCC
Q 011567 316 HAL-ATEGGFCTGS-ARVVDHQRLSS---SGY-VFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHG 389 (483)
Q Consensus 316 K~l-g~~GG~i~~~-~~~~~~~~~~~---~~~-~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~ 389 (483)
|.+ +..||+++++ +++.+.++... .++ +|++ +++...+|+..+++...+. +..+...++.++|.+.|++. |
T Consensus 260 K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g-~~~~~~~Ala~~l~e~~~~-~~~~~~~~~~~~l~~~L~~~-G 336 (460)
T PRK13238 260 KDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGG-LAGRDMEALAVGLYEGMDE-DYLAYRIGQVEYLGEGLEEA-G 336 (460)
T ss_pred cCCCCcceeEEEcChHHHHHHhhhcccccCCcccccC-cHHHHHHHHHhhHHHhhCh-HHHHHHHHHHHHHHHHHHHC-C
Confidence 865 4568999887 57877776542 334 3332 3333233333344432222 34555555779999999886 9
Q ss_pred ceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCC--------CCCceEEEccC-CCC
Q 011567 390 LSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCR--------LPVGIRLFVSA-AHS 460 (483)
Q Consensus 390 ~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~--------~~~~lRi~~~~-~~t 460 (483)
+++..+.++..+++.+..-............+++.+++++.||.+.+......++.. ....+|++++- ..|
T Consensus 337 ~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~ 416 (460)
T PRK13238 337 VPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYT 416 (460)
T ss_pred CCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCC
Confidence 999877777777777643211000001113568888898999999775432222110 12459998874 459
Q ss_pred HHHHHHHHHHHHHHHH
Q 011567 461 EADLVKACESLKRISA 476 (483)
Q Consensus 461 ~edi~~~~~~l~~~~~ 476 (483)
++++|.++++|+++.+
T Consensus 417 ~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 417 QSHMDYVAEALKAVKE 432 (460)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 195
>PRK09265 aminotransferase AlaT; Validated
Probab=99.92 E-value=5.8e-22 Score=202.28 Aligned_cols=340 Identities=16% Similarity=0.179 Sum_probs=215.5
Q ss_pred CCeeEEEeecCC--CCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh------CC-CCEEEecc
Q 011567 107 SGKEVVNFASAN--YLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL------GT-PDSILYSY 177 (483)
Q Consensus 107 ~G~~~id~~s~~--~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~------g~-e~~i~~~s 177 (483)
.|+.++||..+| .+++...+++.+++.+.+... . .|+...-..+|++.+|+++ +. ++.+++++
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~-~-------~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~ 102 (404)
T PRK09265 31 EGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTA-Q-------GYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGN 102 (404)
T ss_pred cCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC-C-------CCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeC
Confidence 466889998864 456656788888888766531 1 1222222356788888876 32 23455544
Q ss_pred c-HHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEE
Q 011567 178 G-LSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYI 249 (483)
Q Consensus 178 G-~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~i 249 (483)
| ++++..++++++++||.|++..+.|..+...+...|.+++.++.+ |++++++.+.. ++++|
T Consensus 103 G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~----------~~~~v 172 (404)
T PRK09265 103 GVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITP----------RTKAI 172 (404)
T ss_pred ChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccc----------cceEE
Confidence 4 577888899999999999999999988888887778777665421 45666665432 24566
Q ss_pred EEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---c
Q 011567 250 VVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---G 323 (483)
Q Consensus 250 v~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G 323 (483)
++..++|++|.+.+ +++|+++|++||+++|+||+|+...+.. ..........++..-++++||||++|.+| |
T Consensus 173 ~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG 250 (404)
T PRK09265 173 VIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDG--AVHISIASLAPDLLCVTFNGLSKAYRVAGFRVG 250 (404)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCC--CCcCCHHHcCCCceEEEEecchhhccCcccceE
Confidence 65566889999999 8999999999999999999998654432 11111112222323577899999998766 9
Q ss_pred eeec--cHH----HHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHH---HHHHHHHHHHHHHhhccCCCceeec
Q 011567 324 FCTG--SAR----VVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDL---ITKLKKNTAILRTGLSDIHGLSIAS 394 (483)
Q Consensus 324 ~i~~--~~~----~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~---~~~l~~~~~~l~~~L~~~~~~~i~~ 394 (483)
|++. +++ +++.+.... ...+ ..+.....++.+++...+...+. .+++.++.+.+.+.|++++++.+..
T Consensus 251 ~~v~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~ 327 (404)
T PRK09265 251 WMVLSGPKKHAKGYIEGLDMLA-SMRL--CANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVK 327 (404)
T ss_pred EEEEeCchHHHHHHHHHHHHHh-cccc--CCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccC
Confidence 9874 443 333332211 1111 22444444455555311110111 2356677788888888776777665
Q ss_pred CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 395 NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 395 ~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
+..+.++++.++........+ .+.+.+++.+.||.+.++...... .+..+|+++. .+++++++++++|+++
T Consensus 328 p~~g~~l~~~~~~~~~~~~~~----~~~~~~~l~~~gv~v~pg~~F~~~---~~~~~Ri~~~--~~~e~l~~~l~rl~~~ 398 (404)
T PRK09265 328 PKGALYAFPKLDPKVYPIHDD----EQFVLDLLLQEKVLLVQGTGFNWP---EPDHFRIVTL--PRVDDLEEAIGRIGRF 398 (404)
T ss_pred CCcceEEEEEecccccCCCCH----HHHHHHHHHhCCEEEECchhhCCC---CCCeEEEEeC--CCHHHHHHHHHHHHHH
Confidence 556778888875321000011 122334566679999887543210 1235999984 6899999999999988
Q ss_pred HHHH
Q 011567 475 SAVV 478 (483)
Q Consensus 475 ~~~~ 478 (483)
++..
T Consensus 399 l~~~ 402 (404)
T PRK09265 399 LSGY 402 (404)
T ss_pred HHHh
Confidence 8653
No 196
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.91 E-value=1e-21 Score=199.17 Aligned_cols=332 Identities=15% Similarity=0.119 Sum_probs=213.3
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHH---HHHhhhCC--CC-EEEecccHHHHHh
Q 011567 111 VVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEA---RIAKFLGT--PD-SILYSYGLSTMFS 184 (483)
Q Consensus 111 ~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~---~La~~~g~--e~-~i~~~sG~~a~~~ 184 (483)
|+|-++..+ .++.+.+++.+.++.+..... ....|+. .....+++ .+++.++. ++ .++.+++++++..
T Consensus 2 yld~aa~~~----~~~~v~~~~~~~~~~~~~n~~-~~~~~~~-~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~ 75 (382)
T TIGR03403 2 YLDNNATTM----LDPKVKELMDPFFCDIYGNPN-SLHQFGT-ATHPAIAEALDKLYKGINARDLDDIIITSCATESNNW 75 (382)
T ss_pred cccCcCCCC----CCHHHHHHHHHHHHhcCcCCc-cccHHHH-HHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence 455554422 567899999998887433222 2223332 22333444 44444553 34 4455677788888
Q ss_pred hhhhhc-----cC-CcEEEEcCCchhHHHhH---hhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEE
Q 011567 185 AIPCFC-----KK-GDLIVADEGVHWGIQNG---LYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIV 250 (483)
Q Consensus 185 ai~~~~-----~~-gdiI~~~~~~h~s~~~g---~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv 250 (483)
+++++. ++ ++.|++....|.++... ++..|.+++.++.+ |++++++.+.. .+++|+
T Consensus 76 ~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~----------~t~lv~ 145 (382)
T TIGR03403 76 VLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAITE----------KTALVS 145 (382)
T ss_pred HHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhccc----------CCeEEE
Confidence 887652 34 56788888888776544 34567888877654 56666665532 267888
Q ss_pred EecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccH
Q 011567 251 VEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSA 329 (483)
Q Consensus 251 ~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~ 329 (483)
+..+.+++|.+.|+++|.++|++||+++++|++++.|.+. .++....+|+++.|.+|.+|+.| |++..++
T Consensus 146 ~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~g~l~vr~ 216 (382)
T TIGR03403 146 VMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIP---------VDVQKAGVDFLSFSAHKFHGPKGVGGLYIRK 216 (382)
T ss_pred EEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCc---------cCccccCCCEEEEcchhhCCCCceEEEEECC
Confidence 8889999999999999999999999999999999865321 22322456999999999888765 6654443
Q ss_pred HHH-HHHHh-c--CCceeecCCCcHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHhhccCCCceeecCC--C-CCEE
Q 011567 330 RVV-DHQRL-S--SSGYVFSASLPPYLASAAITAIDVLEEN-PDLITKLKKNTAILRTGLSDIHGLSIASNP--E-SPIV 401 (483)
Q Consensus 330 ~~~-~~~~~-~--~~~~~fs~~~~p~~~aaa~~al~~l~~~-~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~--~-~~i~ 401 (483)
... ..... . ...+ ..++.+.....++.++++...+. +...+++++..+++.+.|++++++.+.++. . .+++
T Consensus 217 ~~~~~p~~~g~~~~~~~-~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 295 (382)
T TIGR03403 217 GVELTPLFHGGEHMGGR-RSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTI 295 (382)
T ss_pred CCCCCCcccCCCCCCCc-ccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEE
Confidence 320 01000 0 0011 12345555665666777766542 456788888999999999888888887543 2 3466
Q ss_pred EEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccc---c---------cc--CCCCCceEEEccCCCCHHHHHHH
Q 011567 402 FLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSM---L---------DK--CRLPVGIRLFVSAAHSEADLVKA 467 (483)
Q Consensus 402 ~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~---~---------~~--~~~~~~lRi~~~~~~t~edi~~~ 467 (483)
.+.++.. + ...+... |.++||.++.+..+. + .. ....+.||++++..+|++|||++
T Consensus 296 ~~~~~~~------~---~~~~~~~-L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~ 365 (382)
T TIGR03403 296 LISIKGV------E---GEAMLWD-LNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYT 365 (382)
T ss_pred EEEeCCC------C---HHHHHHh-hccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHH
Confidence 6666421 1 2244554 556799998643221 1 00 00013499999999999999999
Q ss_pred HHHHHHHHHHH
Q 011567 468 CESLKRISAVV 478 (483)
Q Consensus 468 ~~~l~~~~~~~ 478 (483)
+++|+++++++
T Consensus 366 ~~~l~~~~~~~ 376 (382)
T TIGR03403 366 IEVFKKAVQRL 376 (382)
T ss_pred HHHHHHHHHHH
Confidence 99999988764
No 197
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.91 E-value=6.6e-22 Score=198.23 Aligned_cols=303 Identities=17% Similarity=0.282 Sum_probs=211.5
Q ss_pred HHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhh-ccCCcEEEEcCCchhHHHh
Q 011567 130 ESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF-CKKGDLIVADEGVHWGIQN 208 (483)
Q Consensus 130 ~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~-~~~gdiI~~~~~~h~s~~~ 208 (483)
+++.+.+.+. .++..+...++++.+++++|.++++++++|++|+..++.++ .++||.|+++...|.++..
T Consensus 3 ~~~~~~~~~~---------~~~~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~ 73 (352)
T cd00616 3 EAVEEVLDSG---------WLTLGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATAN 73 (352)
T ss_pred HHHHHHHHcC---------CccCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH
Confidence 4555666552 22344678999999999999999999999999999999988 5899999999999999998
Q ss_pred HhhhcCCeEEEecCC------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeC
Q 011567 209 GLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDE 282 (483)
Q Consensus 209 g~~~s~~~v~~~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DE 282 (483)
.+...|.+++.++.+ |++++++.++ + ++++|++.+ .+|.+.|+++|+++|++||+++|+|+
T Consensus 74 ~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~---~-------~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~ 140 (352)
T cd00616 74 AILLLGATPVFVDIDPDTYNIDPELIEAAIT---P-------RTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDA 140 (352)
T ss_pred HHHHcCCeEEEEecCCCcCCcCHHHHHHhcC---c-------CCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEEC
Confidence 888889888876543 5677766552 1 256666654 46889999999999999999999999
Q ss_pred ccccccccCCCCccccccCCCCCceeEEEcccc--cccc-CCCceeecc-HHHHHHHHh---cCCc----------eeec
Q 011567 283 SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMG--HALA-TEGGFCTGS-ARVVDHQRL---SSSG----------YVFS 345 (483)
Q Consensus 283 a~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~--K~lg-~~GG~i~~~-~~~~~~~~~---~~~~----------~~fs 345 (483)
+|++|.... ++ ..+.. .|+.+.|++ |+++ +.||+++.+ +++.+.++. .+.. ..+.
T Consensus 141 a~~~g~~~~-~~----~~~~~---~d~~~~S~~~~K~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (352)
T cd00616 141 AQALGATYK-GR----KVGTF---GDAGAFSFHPTKNLTTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYN 212 (352)
T ss_pred CCCCCCeEC-CE----EcccC---cceeEEcCCCCCCCcccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeec
Confidence 999875432 11 11211 266666766 9996 456777664 566655432 1111 1123
Q ss_pred CCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCC-----CCEEEEEecCCCCCchhhHHHHH
Q 011567 346 ASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPE-----SPIVFLILEKSTGSMKNDLQLLE 420 (483)
Q Consensus 346 ~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~-----~~i~~l~l~~~~~~~~~~~~~~~ 420 (483)
..++++.++.+...++.+ ++..++.+++.+++++.|.+++|+++..... .+++.+.+.+..+ ....
T Consensus 213 ~~~~~~~aa~~~~~l~~~---~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 283 (352)
T cd00616 213 YRLSEIQAAIGLAQLEKL---DEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAG------ESRD 283 (352)
T ss_pred cCcCHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCC------CCHH
Confidence 356777777777666554 3477888999999999999988887764322 3466776643101 1123
Q ss_pred HHHHHHHHhCCEEEEeecccccccC-----------CCC-------CceEEEccCCCCHHHHHHHHHHHH
Q 011567 421 DIADWALKEDGVFVVTSKRSMLDKC-----------RLP-------VGIRLFVSAAHSEADLVKACESLK 472 (483)
Q Consensus 421 ~i~~~~l~~~Gv~v~~~~~~~~~~~-----------~~~-------~~lRi~~~~~~t~edi~~~~~~l~ 472 (483)
++.+. |+++||.+.....+...+. ..| ..||++++..+|++||++++++|+
T Consensus 284 ~v~~~-L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 284 ELIEA-LKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHHH-HHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 56665 5566998765544332211 012 359999999999999999999874
No 198
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=8.4e-22 Score=199.18 Aligned_cols=319 Identities=17% Similarity=0.142 Sum_probs=219.3
Q ss_pred CCeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEeccc-HHHHH
Q 011567 107 SGKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILYSYG-LSTMF 183 (483)
Q Consensus 107 ~G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~~sG-~~a~~ 183 (483)
.++++|||..| |.++. +|.+.+++.+. ... . .|.. +...+|++.|++++|.+ +.|++++| ++++.
T Consensus 50 ~~~~~i~l~~n~~p~~~--~~~v~~a~~~~-~~~-~-------~Yp~-~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~ 117 (380)
T PLN03026 50 KPEDIVKLDANENPYGP--PPEVLEALGNM-KFP-Y-------VYPD-PESRRLRAALAEDSGLESENILVGCGADELID 117 (380)
T ss_pred CccceEEccCCCCCCCC--CHHHHHHHHhh-Hhh-c-------cCCC-CCHHHHHHHHHHHhCcChhhEEEcCCHHHHHH
Confidence 35688999998 66655 47788776542 110 0 1222 12578999999999854 45656555 57888
Q ss_pred hhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCC
Q 011567 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNS 258 (483)
Q Consensus 184 ~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~ 258 (483)
.++.++.++||.|++..+.+..+....+..|.+++.++.+ |+++|++.+.. . ++++|++..++|++
T Consensus 118 ~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~--~-------~~~~v~l~~P~NPT 188 (380)
T PLN03026 118 LLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVET--H-------KPKLLFLTSPNNPD 188 (380)
T ss_pred HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhc--c-------CCcEEEEeCCCCCC
Confidence 8888999999999999998877777777888888877643 45666655522 1 25677777889999
Q ss_pred CCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHH
Q 011567 259 GQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQ 335 (483)
Q Consensus 259 G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~ 335 (483)
|.+.|.+++.++++.. +++|+||+|...... +.. ... +...+..++++||||++|..| ||+++++++++.+
T Consensus 189 G~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~--~~~-~~~--~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~l 262 (380)
T PLN03026 189 GSIISDDDLLKILELP-ILVVLDEAYIEFSTQ--ESR-MKW--VKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL 262 (380)
T ss_pred CCCCCHHHHHHHHhcC-CEEEEECcchhhcCC--cch-HHH--HHhCCCEEEEecchHhhcCccccceeeecCHHHHHHH
Confidence 9999999999999865 999999999754321 111 111 111234688999999999878 9999999999887
Q ss_pred HhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 011567 336 RLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 415 (483)
Q Consensus 336 ~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~ 415 (483)
+.....+ +.+.....++.++|+..+...+.++.++++.+++.+.|+++.++.+. +..++++++.++... +
T Consensus 263 ~~~~~~~----~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~~~~f~~~~~~~~~-----~ 332 (380)
T PLN03026 263 WRAKQPY----NVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEPY-PSDANFILCRVTSGR-----D 332 (380)
T ss_pred HHhcCCC----CCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEC-CCCCeEEEEECCCCC-----C
Confidence 6554433 23455555566666422212346777888888999999887445543 457888888774311 1
Q ss_pred HHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 416 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 416 ~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
..++.+.++ ++||.+++...+. .++.+||++. +.++++++.++|+++
T Consensus 333 ---~~~~~~~l~-~~gI~v~~~~~~~-----~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 333 ---AKKLKEDLA-KMGVMVRHYNSKE-----LKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred ---HHHHHHHHH-HCCeEEEECCCCC-----CCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 235677665 5699998643211 1345999985 788999999988753
No 199
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.91 E-value=5.5e-22 Score=199.72 Aligned_cols=323 Identities=17% Similarity=0.175 Sum_probs=208.9
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC----CCEEEeccc-HHH
Q 011567 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT----PDSILYSYG-LST 181 (483)
Q Consensus 107 ~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~----e~~i~~~sG-~~a 181 (483)
++..++||..+++... .++.+.+++.+..... +.+ ...|..++.+.+++.+.+..|. ++.|+.++| .++
T Consensus 25 ~~~~~i~l~~~~p~~~-~~~~~~~~~~~~~~~~--~Y~---~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~ 98 (364)
T PRK07865 25 HPDGIVDLSVGTPVDP-VPPVIQEALAAAADAP--GYP---TTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKEL 98 (364)
T ss_pred cCCCEEEcCCCCCCCC-CCHHHHHHHHHHHhhC--CCC---CccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHH
Confidence 3456799998865432 3577788877654321 111 1234444555555555544342 345666555 577
Q ss_pred HHhhhhhh-ccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCC
Q 011567 182 MFSAIPCF-CKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQ 260 (483)
Q Consensus 182 ~~~ai~~~-~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~ 260 (483)
+..+..++ +++||.|+++.++|..+...+...|.+++.++ +.++++. . .+++|++++++|++|.
T Consensus 99 i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~--~~~~l~~------~-------~~~~v~~~~p~NPtG~ 163 (364)
T PRK07865 99 VAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD--SLTELGP------Q-------RPALIWLNSPSNPTGR 163 (364)
T ss_pred HHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecC--ChhhCCc------c-------cceEEEEcCCCCCCCc
Confidence 77766777 69999999999999999888888899887764 3333321 1 2567777788999999
Q ss_pred ccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccc----cCCCCCceeEEEccccccccCCC---ceeeccHH
Q 011567 261 IAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEH----CGVPVDKIDIVTAAMGHALATEG---GFCTGSAR 330 (483)
Q Consensus 261 i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~----~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~ 330 (483)
+.+ +++|+++|++||+++|+||+|....+. +...... .+.. .+..++++||||++|..| ||++++++
T Consensus 164 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~GlRiG~i~~~~~ 240 (364)
T PRK07865 164 VLGVDHLRKVVAWARERGAVVASDECYLELGWD--AEPVSILDPRVCGGD-HTGLLAVHSLSKQSNLAGYRAGFVAGDPA 240 (364)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEecchhhhccC--CCCCccccccccCCc-cceEEEEeechhccCCCceeeEEEecCHH
Confidence 887 688999999999999999999864432 2221110 0111 234688999999997666 99999999
Q ss_pred HHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCC
Q 011567 331 VVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTG 410 (483)
Q Consensus 331 ~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~ 410 (483)
+++.++.......+ +.++....++.++++..+...+.++.++++.+.+.+.|++. |+.+..+..+.++++.+..
T Consensus 241 ~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~--- 314 (364)
T PRK07865 241 LVAELLEVRKHAGM--MVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA-GFRVDHSEAGLYLWATRGE--- 314 (364)
T ss_pred HHHHHHHHHHhcCC--CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCccEEEEEeCCC---
Confidence 98887654322222 23455555555555432222346677788888899999875 7766544344455555421
Q ss_pred CchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHH
Q 011567 411 SMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 472 (483)
Q Consensus 411 ~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 472 (483)
+ ..++++. ++++||.+.++.+.... .+..+||+++. +++++++++++|+
T Consensus 315 ----~---~~~~~~~-l~~~gv~v~pg~~f~~~---~~~~iRi~~~~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 315 ----D---CWDTVAW-LAERGILVAPGDFYGPA---GAQHVRVALTA--TDERIAAAVERLA 363 (364)
T ss_pred ----C---HHHHHHH-HHHCCEEEeCccccCcC---CCCEEEEEecC--CHHHHHHHHHHhh
Confidence 1 1245554 45579999886543210 13459999874 6899999998875
No 200
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.91 E-value=5.2e-22 Score=201.95 Aligned_cols=333 Identities=16% Similarity=0.149 Sum_probs=215.7
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----C----CC--CEEEe-
Q 011567 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G----TP--DSILY- 175 (483)
Q Consensus 107 ~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g----~e--~~i~~- 175 (483)
.|++++||..+.. .+..++.+.+++.+.+... ...+. ..|. .+|++.+|+++ | .+ +.++.
T Consensus 26 ~~~~~i~l~~~~p-~~~~~~~~~~a~~~~~~~~-~~Y~~---~~G~----~~lr~aia~~~~~~~~~~~~~~~~~~i~it 96 (393)
T TIGR03538 26 ASKPPIALSIGEP-KHPTPAFVLEALRENLHGL-STYPT---TKGL----PELRQAIARWLERRFDLPTGVDPERHVLPV 96 (393)
T ss_pred cCCCeEEecCCCC-CCCCCHHHHHHHHHHhhcc-CCCCC---CCCC----HHHHHHHHHHHHHhhCCcccCCCCceEEEC
Confidence 4678899998843 2334578888888766431 11111 2233 44555555554 3 22 34555
Q ss_pred cccHHHHHhhhhhhccCCcE--EEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCcc
Q 011567 176 SYGLSTMFSAIPCFCKKGDL--IVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLR 246 (483)
Q Consensus 176 ~sG~~a~~~ai~~~~~~gdi--I~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~ 246 (483)
+++.+++..++++++++||. |+++.+++..+...+...|.+++.++.. |++++++.+.+ ++
T Consensus 97 ~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~----------~~ 166 (393)
T TIGR03538 97 NGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWR----------RC 166 (393)
T ss_pred CCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhh----------cc
Confidence 55568888999999999984 8889999888777778888888877642 45666655532 25
Q ss_pred EEEEEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCc--cccc---cCCCCCceeEEEccccccc
Q 011567 247 RYIVVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRG--LTEH---CGVPVDKIDIVTAAMGHAL 318 (483)
Q Consensus 247 ~~iv~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g--~~~~---~~v~~~~~Di~~~s~~K~l 318 (483)
++|++...+|++|.+.+ +++|+++|++|++++|+||+|....+...... .... .+....+..|+++|+||.+
T Consensus 167 k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~ 246 (393)
T TIGR03538 167 QLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRS 246 (393)
T ss_pred eEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhc
Confidence 66666677899999998 79999999999999999999986544311011 1111 1111123358899999998
Q ss_pred cCCC---ceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecC
Q 011567 319 ATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASN 395 (483)
Q Consensus 319 g~~G---G~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~ 395 (483)
+.+| ||+++++++++.+....... +.+.++....++.+++..-+...+.++.++++.+.+.+.|++. +.+..+
T Consensus 247 ~~~GlRvG~~i~~~~l~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p 322 (393)
T TIGR03538 247 NLPGLRSGFVAGDAEILKAFLRYRTYH--GCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV--LDLELP 322 (393)
T ss_pred CCcccceEEEecCHHHHHHHHHHHHhh--ccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh--CcccCC
Confidence 8777 99999999888765432211 2233555555555555321111245666777788888888764 333345
Q ss_pred CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccccc---CCCCCceEEEccCCCCHHHHHHHHHHHH
Q 011567 396 PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDK---CRLPVGIRLFVSAAHSEADLVKACESLK 472 (483)
Q Consensus 396 ~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~---~~~~~~lRi~~~~~~t~edi~~~~~~l~ 472 (483)
..+.++++.++. + ..++++.++++.||.+.++....... ...+..+||++.. +++++++++++|+
T Consensus 323 ~gg~f~~~~~~~-------~---~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~--~~~~l~~~l~~l~ 390 (393)
T TIGR03538 323 DAGFYLWPKVPG-------D---DEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA--PLEECVEAAERIR 390 (393)
T ss_pred CeeEEEEEECCC-------C---HHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC--CHHHHHHHHHHHH
Confidence 567788888741 1 13567766776799999886532210 1112459999864 6899999999987
Q ss_pred HH
Q 011567 473 RI 474 (483)
Q Consensus 473 ~~ 474 (483)
+.
T Consensus 391 ~~ 392 (393)
T TIGR03538 391 SF 392 (393)
T ss_pred Hh
Confidence 64
No 201
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.91 E-value=1.1e-21 Score=200.37 Aligned_cols=345 Identities=12% Similarity=0.106 Sum_probs=219.9
Q ss_pred ECCeeEEEeecCCCC---CCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----C----CCCEEE
Q 011567 106 ISGKEVVNFASANYL---GLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G----TPDSIL 174 (483)
Q Consensus 106 ~~G~~~id~~s~~~l---G~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g----~e~~i~ 174 (483)
.+|+.+|+|+-+++- .+...|.+.+++.+.+++-... .|+...-..+|++.+++++ | .++.++
T Consensus 29 ~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~------~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~i 102 (409)
T PLN00143 29 DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFN------SYAPTGGILPARRAIADYLSNDLPYQLSPDDVYL 102 (409)
T ss_pred CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCC------CCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEE
Confidence 457889999988653 3556678889998888752211 1221122345666666665 3 134445
Q ss_pred ecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC---C----CHHHHHHHHHHhhhhhhhccCccE
Q 011567 175 YSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH---N----DMDSLRNTLERVTADNKRAKKLRR 247 (483)
Q Consensus 175 ~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~---~----d~~~Le~~l~~~~~~~~~~~~~~~ 247 (483)
.+++.+++..++.+++++||.|++..+++..+...+...|.+++.++. + |+++|++.++. . +..
T Consensus 103 t~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~------~~~ 173 (409)
T PLN00143 103 TLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADE---N------TIA 173 (409)
T ss_pred ecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhccc---C------CEE
Confidence 566678999999999999999999999998888888888888877753 1 56677665432 1 234
Q ss_pred EEEEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC--
Q 011567 248 YIVVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-- 322 (483)
Q Consensus 248 ~iv~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-- 322 (483)
++++ ..+|++|.+.+ +++|+++|++|++++|+||+|...+++ ++-......+...+.-|+++||||.++.+|
T Consensus 174 ~~~~-nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~--~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlR 250 (409)
T PLN00143 174 MVII-NPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFG--SKPFVPMGLFASIVPVITLGSISKRWMIPGWG 250 (409)
T ss_pred EEEE-CCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccC--CCCCcchhhhcccCcEEEEccchhhcCCCccc
Confidence 4544 45889999998 788999999999999999999876553 221111111222223588999999998776
Q ss_pred -ceeecc--HHH------HHHHHhcCCceeecCCCcHHHHHHHHHHHHHH--hcCcHHHHHHHHHHHHHHHhhccCCCce
Q 011567 323 -GFCTGS--ARV------VDHQRLSSSGYVFSASLPPYLASAAITAIDVL--EENPDLITKLKKNTAILRTGLSDIHGLS 391 (483)
Q Consensus 323 -G~i~~~--~~~------~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l--~~~~~~~~~l~~~~~~l~~~L~~~~~~~ 391 (483)
||++++ +.+ ++.+........++ +.....++.++++.- ...++.++.++++.+.+.+.|.++++..
T Consensus 251 vG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 327 (409)
T PLN00143 251 LGWLVTCDPSGLLQICEIADSIKKALNPAPFP---PTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIM 327 (409)
T ss_pred eEEEEeeCchhhhhhHHHHHHHHHHHhccCCC---CchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 999873 333 23232221111221 334444444455310 1113467777788888888888764433
Q ss_pred ee-cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHH
Q 011567 392 IA-SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACES 470 (483)
Q Consensus 392 i~-~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~ 470 (483)
.. .+..+.++++.++..... ......+++..+++++||.+.++..... ++.+||++. .+++++++++++
T Consensus 328 ~~~~p~gg~f~w~~l~~~~~~---~~~~~~~~~~~ll~~~gV~v~pg~~f~~-----~~~iRi~~~--~~~~~l~~al~r 397 (409)
T PLN00143 328 CPQKAEGAFFALVKLNLLLLE---DIEDDMEFCLKLAKEESLIILPGVTVGL-----KNWLRITFA--VEQSSLEDGLGR 397 (409)
T ss_pred CCCCCCeeEEEEEecchhhcC---CCCCHHHHHHHHHHhCCEEEeCccccCC-----CCeEEEEEc--CCHHHHHHHHHH
Confidence 22 233577888887421000 0001234555566677999998754321 355999997 468999999999
Q ss_pred HHHHHHHHHhc
Q 011567 471 LKRISAVVLRD 481 (483)
Q Consensus 471 l~~~~~~~~~~ 481 (483)
|++++++..++
T Consensus 398 l~~~l~~~~~~ 408 (409)
T PLN00143 398 LKSFCGRHAKK 408 (409)
T ss_pred HHHHHHHhccC
Confidence 99998776543
No 202
>PRK07337 aminotransferase; Validated
Probab=99.91 E-value=5e-22 Score=201.76 Aligned_cols=335 Identities=12% Similarity=0.111 Sum_probs=217.6
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----CC----CCEEEecccH
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----PDSILYSYGL 179 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g~----e~~i~~~sG~ 179 (483)
|..+++|..++. .+...|.+.+++.+.++..... |+......+|++.+|+++ |. ++.+++++++
T Consensus 29 ~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~ 100 (388)
T PRK07337 29 GRDIIHMGIGEP-DFTAPEPVVEAAARALRRGVTQ-------YTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGAS 100 (388)
T ss_pred CCCEEEeCCcCC-CCCCCHHHHHHHHHHHhcCCCC-------CCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcH
Confidence 345788887743 2324578888888877642111 222222455666666664 42 3556667778
Q ss_pred HHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEEe
Q 011567 180 STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVVE 252 (483)
Q Consensus 180 ~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e 252 (483)
+++..++.++.++||.|+++.++|......+...+.+++.++.+ |++++++.+.. ++++|++.
T Consensus 101 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----------~~~~v~l~ 170 (388)
T PRK07337 101 AALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGE----------RTRGVLLA 170 (388)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCc----------cceEEEEE
Confidence 99988999999999999999999998888888888888777642 34555544422 25566667
Q ss_pred cccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceee
Q 011567 253 AVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCT 326 (483)
Q Consensus 253 ~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~ 326 (483)
.+++++|.+.+ +++|+++|++|++++|+||+|....+.. .. ....... + .-++++|+||.+|..| ||++
T Consensus 171 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~-~~~~~~~-~-~vi~~~S~SK~~~~~G~RiG~~~ 245 (388)
T PRK07337 171 SPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDA--AP-VSALSLG-D-DVITINSFSKYFNMTGWRLGWLV 245 (388)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCC--CC-cChhhcc-C-CEEEEEechhhcCCchhheeeee
Confidence 77889999887 6888999999999999999997543322 11 1111222 1 1366789999998666 9999
Q ss_pred ccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHH--HhcCcHHHHHHHHHHHHHHHhhccCCCcee-ecCCCCCEEEE
Q 011567 327 GSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDV--LEENPDLITKLKKNTAILRTGLSDIHGLSI-ASNPESPIVFL 403 (483)
Q Consensus 327 ~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~--l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i-~~~~~~~i~~l 403 (483)
+++++++.++.....+..+ .++....++..+++. .....+.++.++++.+.+.+.|++. ++.+ ..+..+.++++
T Consensus 246 ~~~~l~~~l~~~~~~~~~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~p~~g~f~~~ 322 (388)
T PRK07337 246 VPEALVGTFEKLAQNLFIC--ASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKVPVMPDGAFYVYA 322 (388)
T ss_pred cCHHHHHHHHHHHHHhccC--CChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCeeEEEEE
Confidence 9999888776543332222 234444444444431 1112345677788888888999885 6654 23446778888
Q ss_pred EecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 404 ILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 404 ~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
.++..... +.....+++..+++++||.+.++.....+ ..+..+|+++.. +++++++++++|.+++
T Consensus 323 ~~~~~~~~---~~~~~~~~~~~ll~~~gv~v~pg~~f~~~--~~~~~~Ri~~~~--~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 323 DCRGVAHP---AAGDSAALTQAMLHDAGVVLVPGRDFGPH--APRDYIRLSYAT--SMSRLEEAVARLGKLF 387 (388)
T ss_pred ecccccCC---CCCCHHHHHHHHHHhCCEEEeCchhhCCC--CCCCEEEEEecC--CHHHHHHHHHHHHHHh
Confidence 87531000 00012356777777789999887543321 112459999975 6899999999988764
No 203
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.91 E-value=3e-22 Score=203.07 Aligned_cols=213 Identities=17% Similarity=0.227 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHH----hHhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~----~g~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+|+++||++.|.++++++++|++|+..++.++.++||.|+++.+.|.++. ..+...|.++..++..|+++++
T Consensus 64 p~~~~Le~~iA~~~g~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~ 143 (400)
T PRK06234 64 PTSTEVENKLALLEGGEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEEVR 143 (400)
T ss_pred ccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHHHH
Confidence 456899999999999999999999999999999999999999999988776644 3456788999999988988888
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHc--CcEEEEeCccccccccCCCCccccccCCCCCce
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKY--RFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKI 307 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~--~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~ 307 (483)
+.+.. ++++|++|.++|++|.+.|+++|.++|++| |+++|+||+|+.+.++. . .+ ...
T Consensus 144 ~~i~~----------~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~---~----l~---~g~ 203 (400)
T PRK06234 144 NALKA----------NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQR---P----LQ---LGA 203 (400)
T ss_pred HHhcc----------CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCC---c----hh---hCC
Confidence 87743 267999999999999999999999999997 99999999998765431 1 11 234
Q ss_pred eEEEccccccccCC----CceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHh
Q 011567 308 DIVTAAMGHALATE----GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTG 383 (483)
Q Consensus 308 Di~~~s~~K~lg~~----GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~ 383 (483)
|++++|++|.+++. ||++++++++++.++..+....++..++|..+..+...++.+ +...++..+++..+.+.
T Consensus 204 Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~tl---~~r~~~~~~na~~~a~~ 280 (400)
T PRK06234 204 DVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKTL---QIRMEKHCKNAMKVAKF 280 (400)
T ss_pred cEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcH---HHHHHHHHHHHHHHHHH
Confidence 89999999999753 599999999888876543334456678899888887776554 34777788899999999
Q ss_pred hccCCC
Q 011567 384 LSDIHG 389 (483)
Q Consensus 384 L~~~~~ 389 (483)
|++.+.
T Consensus 281 L~~~~~ 286 (400)
T PRK06234 281 LESHPA 286 (400)
T ss_pred HHcCCC
Confidence 987653
No 204
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.91 E-value=3.1e-22 Score=206.00 Aligned_cols=327 Identities=15% Similarity=0.125 Sum_probs=220.2
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC----CCCEE-EecccHHHHH
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG----TPDSI-LYSYGLSTMF 183 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g----~e~~i-~~~sG~~a~~ 183 (483)
...+||++++...- ..|.+.+++.+..... ..|+......+|++.++++++ .++.| +.+++.+++.
T Consensus 85 ~~~i~L~~g~p~~~-~~p~~~~~~~~~~~~~--------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~ 155 (431)
T PRK15481 85 TPLHDLAGGNPDPQ-RLPDLSRYFARLSRTP--------RLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIE 155 (431)
T ss_pred chhhhhhcCCCChh-HhHHHHHHHHHhhhhh--------hhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHH
Confidence 35677777643221 2355666665544321 123333334567788888865 23344 4456668899
Q ss_pred hhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCC
Q 011567 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSG 259 (483)
Q Consensus 184 ~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G 259 (483)
.++.+++++||.|+++.++|..+...++..|.+++.++.+ |+++|++.++. . .+.++++...+|++|
T Consensus 156 ~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g~~~~~l~~~~~~---~------~k~i~~~p~p~NPTG 226 (431)
T PRK15481 156 RLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPEKLERALAQ---G------ARAVILTPRAHNPTG 226 (431)
T ss_pred HHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCCCCHHHHHHHHhc---C------CCEEEECCCCCCCCC
Confidence 9999999999999999999999999999999998887653 56677666643 1 233444447888999
Q ss_pred CccCh---HHHHHHHHHc-CcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHH
Q 011567 260 QIAPL---DELIRLKEKY-RFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVV 332 (483)
Q Consensus 260 ~i~~L---~~l~~l~~k~-~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~ 332 (483)
.+.+. ++|.++|++| ++++|+||+|+..... +. ....... .+..|+++||||++| +| ||++++++++
T Consensus 227 ~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~--~~--~~~~~~~-~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~ 300 (431)
T PRK15481 227 CSLSARRAAALRNLLARYPQVLVIIDDHFALLSSS--PY--HSVIPQT-TQRWALIRSVSKALG-PDLRLAFVASDSATS 300 (431)
T ss_pred ccCCHHHHHHHHHHHHhcCCceEEecCchhhhccC--CC--CCCCcCC-CCCEEEEeeeccccC-CCceeEEEeCCHHHH
Confidence 99995 5999999999 9999999999865422 11 1111111 234688999999999 56 9999999998
Q ss_pred HHHHhcCCceeecCCCcHHHHHHHHHHHHHHh---cCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCC
Q 011567 333 DHQRLSSSGYVFSASLPPYLASAAITAIDVLE---ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKST 409 (483)
Q Consensus 333 ~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~---~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~ 409 (483)
+.+........+ +.+.+...++.++|+.-. ...+.++.++++.+.+.+.|++. ++.+..+..+.++++.++..
T Consensus 301 ~~~~~~~~~~~~--~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~~~- 376 (431)
T PRK15481 301 ARLRLRLNSGTQ--WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLDTD- 376 (431)
T ss_pred HHHHHHHhcccc--CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEECCCC-
Confidence 887543322222 235666666666664211 11246777888888899999876 77664455777888887421
Q ss_pred CCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 410 GSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 410 ~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
..++++.++ ++||.+.++....... ....+||++.. .++++++++++.|++++.
T Consensus 377 ---------~~~~~~~l~-~~gV~v~pg~~f~~~~--~~~~iRis~~~-~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 377 ---------SQATALTLA-KSGWLVREGEAFGVSA--PSHGLRITLST-LNDAEINRLAADLHQALN 430 (431)
T ss_pred ---------HHHHHHHHH-HCCcEEecCCccccCC--CCCeEEEEcCC-CChHHHHHHHHHHHHHhc
Confidence 224566554 5699999865432211 12359999865 579999999999998864
No 205
>PRK06855 aminotransferase; Validated
Probab=99.91 E-value=1.1e-21 Score=201.57 Aligned_cols=347 Identities=13% Similarity=0.085 Sum_probs=214.3
Q ss_pred CeeEEEeecCCC--CCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----CC----CCEEEecc
Q 011567 108 GKEVVNFASANY--LGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----PDSILYSY 177 (483)
Q Consensus 108 G~~~id~~s~~~--lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g~----e~~i~~~s 177 (483)
|++++++..+++ .++..++.+.+++.+.+++-.. . .|+...-..+|++.+|+++ |. ++.+++++
T Consensus 31 g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~--~----~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G 104 (433)
T PRK06855 31 GVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKS--Y----GYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNG 104 (433)
T ss_pred cccccccccCCCcccCCCCCHHHHHHHHHHhhcCCC--C----CCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCc
Confidence 566788876654 3666677888888887754211 0 1222222345556666654 42 23444455
Q ss_pred cHHHHHhhhhhhccCCcEEEEcCCchhHHHhHh-hhcCCeEEEecC-------CCHHHHHHHHHHhhhhhhhccCccEEE
Q 011567 178 GLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL-YLSRSTVVYFKH-------NDMDSLRNTLERVTADNKRAKKLRRYI 249 (483)
Q Consensus 178 G~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~-~~s~~~v~~~~~-------~d~~~Le~~l~~~~~~~~~~~~~~~~i 249 (483)
+.+++..++. ++.+||.|++++++|..+.... ...+.+++.++. -|+++|++.++... +++++
T Consensus 105 ~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~--------~~~~i 175 (433)
T PRK06855 105 LGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNP--------SIAGI 175 (433)
T ss_pred HHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCC--------CceEE
Confidence 5688877774 7889999999999887654332 234666655532 26788887775321 13555
Q ss_pred EEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---c
Q 011567 250 VVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---G 323 (483)
Q Consensus 250 v~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G 323 (483)
++...+|++|.+.+ +++|+++|++||+++|.||+|+...+.. ........+.++...|+++||||.++.+| |
T Consensus 176 ~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~--~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG 253 (433)
T PRK06855 176 LLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNG--KKTVPLSEVIGDVPGIALKGISKELPWPGSRCG 253 (433)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC--CCCCCHHHHcCcCCeEEEecCccccCCCcceEE
Confidence 55566899999998 7888999999999999999998655432 21111122222323588999999998666 9
Q ss_pred eeecc-----H---HHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHH--h-cCcHHHHHHHHHHHHHHHhhccCCCcee
Q 011567 324 FCTGS-----A---RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL--E-ENPDLITKLKKNTAILRTGLSDIHGLSI 392 (483)
Q Consensus 324 ~i~~~-----~---~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l--~-~~~~~~~~l~~~~~~l~~~L~~~~~~~i 392 (483)
|++++ + .+++.+..... ... +.+.+...++.++++.- + ...+.++.++++.+.+.+.|++++++.+
T Consensus 254 ~ii~p~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~ 330 (433)
T PRK06855 254 WIEVYNADKDEVFKKYINSILNAKM-IEV--CSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKV 330 (433)
T ss_pred EEEEeCCchhhHHHHHHHHHHHhhc-ccc--CCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeec
Confidence 99862 2 23333322111 111 22444555555555321 1 1134567778888889899987767666
Q ss_pred ecCCCCCEEEEEecCCCC-------Cc--hhhHH----------HHHHHHHHHHHhCCEEEEeecccccccCCCCCceEE
Q 011567 393 ASNPESPIVFLILEKSTG-------SM--KNDLQ----------LLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRL 453 (483)
Q Consensus 393 ~~~~~~~i~~l~l~~~~~-------~~--~~~~~----------~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi 453 (483)
..+..+.++++.++.... .. +.... ...+++..++++.||.+.++..... ...++||
T Consensus 331 ~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~----~~~~~Rl 406 (433)
T PRK06855 331 NRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCT----ELNGFRV 406 (433)
T ss_pred cCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCC----CCCceEE
Confidence 555456778887754210 00 00000 1235566667778999998864421 1245999
Q ss_pred EccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 454 FVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 454 ~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
++.. .++++|+++++.|++++++.+
T Consensus 407 s~~~-~~~~~i~~~~~~l~~~~~~~~ 431 (433)
T PRK06855 407 TLLE-RDEEKFEWIYQTLAEKIEEYL 431 (433)
T ss_pred EECC-CcHHHHHHHHHHHHHHHHHHh
Confidence 9976 589999999999999998754
No 206
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.91 E-value=2.1e-21 Score=194.70 Aligned_cols=321 Identities=12% Similarity=0.182 Sum_probs=214.8
Q ss_pred eeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhh
Q 011567 109 KEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAI 186 (483)
Q Consensus 109 ~~~id~~s~-~~lG~~-~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai 186 (483)
+++||.+.. ..+|-+ .++++.+++.+.++.| ++..+...++++.+++++|.++++++++|++|+..++
T Consensus 8 ~~~ina~g~~t~~g~s~~~~~v~~a~~~~~~~~----------~~~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al 77 (363)
T TIGR01437 8 KKVINASGKMTILGVSTVSDEVADAQKRGAQNY----------FEIKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSV 77 (363)
T ss_pred ceEEECCcEeecCCCCCCCHHHHHHHHHHHhcC----------CCHHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHH
Confidence 467776664 566654 4789999999887764 3355788999999999999999999999999999999
Q ss_pred hhhccCCc---------------EEEEcCCchhH----HHhHhhhcCCeEEEecC---CCHHHHHHHHHHhhhhhhhccC
Q 011567 187 PCFCKKGD---------------LIVADEGVHWG----IQNGLYLSRSTVVYFKH---NDMDSLRNTLERVTADNKRAKK 244 (483)
Q Consensus 187 ~~~~~~gd---------------iI~~~~~~h~s----~~~g~~~s~~~v~~~~~---~d~~~Le~~l~~~~~~~~~~~~ 244 (483)
.++.++|| .|+++.+.+.. ....+.++|.++++++. -|++++++.+.+.
T Consensus 78 ~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~~~le~ai~~~--------- 148 (363)
T TIGR01437 78 AAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYANECSAEQLEAAITEK--------- 148 (363)
T ss_pred HHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCCCCCHHHHHHhcChh---------
Confidence 99998887 66666533322 24566778888887753 3677888777431
Q ss_pred ccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEcccccccc-CCCc
Q 011567 245 LRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA-TEGG 323 (483)
Q Consensus 245 ~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg-~~GG 323 (483)
++++++++...+++|.+.|+++|.++|++||+++|+|++|+.-. ..... + +.|++++|.+|+++ +.+|
T Consensus 149 t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~-----~~~~~-~-----g~D~~~~S~~K~l~gp~~G 217 (363)
T TIGR01437 149 TAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL-----QKYYR-L-----GADLVIYSGAKAIEGPTSG 217 (363)
T ss_pred ceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch-----HHHHH-c-----CCCEEEEeCCcccCCCceE
Confidence 23344455555677999999999999999999999999997311 10111 1 24899999999885 5689
Q ss_pred eeeccHHHHHHHHhcCCc--eeecCCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCceeecCCCC--
Q 011567 324 FCTGSARVVDHQRLSSSG--YVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPES-- 398 (483)
Q Consensus 324 ~i~~~~~~~~~~~~~~~~--~~fs~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~-- 398 (483)
+++++++.++..+....+ ..+.. .....++..++++.+.+ ..+..+...++.+.+++.|.+++|+.+......
T Consensus 218 ~l~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~ 295 (363)
T TIGR01437 218 LVLGKKKYIEWVKLQSKGIGRAMKV--GKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAG 295 (363)
T ss_pred EEEEcHHHHHHHHhccCCCcceecc--CHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCC
Confidence 999988888766432222 11111 11223444456666653 344566666778889999999989877632111
Q ss_pred ---CEEEEEecCCCCCchhhHHHHHHHHHHHHHhCC--EEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHH
Q 011567 399 ---PIVFLILEKSTGSMKNDLQLLEDIADWALKEDG--VFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 399 ---~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~G--v~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
+...+.+..... .....++.+. |+++| |.+++...+ ...+|+.+.. .+++|++.++++|++
T Consensus 296 ~~~~~~~v~~~~~~~-----g~~~~~l~~~-L~~~~~~I~~r~~~~~-------~~~~~l~~~~-~~~~e~~~~~~~l~~ 361 (363)
T TIGR01437 296 RDIARAEIRFDESEL-----GMTAADVVQA-LRQGEPAIYTRGYKAN-------EGIIEIDPRS-VTGGQLDIIVERIRE 361 (363)
T ss_pred CcCceEEEEEeccCC-----CCCHHHHHHH-HhcCCCCEEEeeeeec-------CCeEEEEeec-CCHHHHHHHHHHHHH
Confidence 122233322100 0112356664 55556 666553211 2458998875 679999999999987
Q ss_pred HH
Q 011567 474 IS 475 (483)
Q Consensus 474 ~~ 475 (483)
++
T Consensus 362 ~~ 363 (363)
T TIGR01437 362 IV 363 (363)
T ss_pred hC
Confidence 63
No 207
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.91 E-value=7e-22 Score=199.49 Aligned_cols=324 Identities=19% Similarity=0.269 Sum_probs=222.8
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHHHhc-CCCCCCCCCccc-ChHHHHHHHHHHHhhhCCCC---EEEecccHHHHHhh
Q 011567 111 VVNFASANYLGLIGHEKLLESCTSALEKY-GVGSCGPRGFYG-TIDVHLDCEARIAKFLGTPD---SILYSYGLSTMFSA 185 (483)
Q Consensus 111 ~id~~s~~~lG~~~~p~i~~a~~~~l~~~-g~g~~~~~~~~g-~~~~~~~l~~~La~~~g~e~---~i~~~sG~~a~~~a 185 (483)
|+|-++. |. .++.+.+++.+.++++ +.+..+...+.. ..+...++++.+++++|.+. .++.++++.++..+
T Consensus 2 Yld~~~~---~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~ 77 (371)
T PF00266_consen 2 YLDNAGT---GP-MPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAV 77 (371)
T ss_dssp EEBTSSS----B--BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHH
T ss_pred EeeCCCc---cC-CCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhh
Confidence 4554443 33 5678899999988764 322112111111 23577899999999999765 44557777888888
Q ss_pred hhhh---ccCCcEEEEcCCchhHHHhH----hhhcCCeEEEecC--C---CHHHHHHHHHHhhhhhhhccCccEEEEEec
Q 011567 186 IPCF---CKKGDLIVADEGVHWGIQNG----LYLSRSTVVYFKH--N---DMDSLRNTLERVTADNKRAKKLRRYIVVEA 253 (483)
Q Consensus 186 i~~~---~~~gdiI~~~~~~h~s~~~g----~~~s~~~v~~~~~--~---d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~ 253 (483)
+..+ .++++.|++....|++.... .+..|.++..++. + |++++++.+.. ++++|++..
T Consensus 78 ~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~----------~~~lv~~~~ 147 (371)
T PF00266_consen 78 ASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNP----------DTRLVSISH 147 (371)
T ss_dssp HHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHT----------TESEEEEES
T ss_pred hhccccccccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhcc----------ccceEEeec
Confidence 8888 68899998888888876622 2355777766653 2 67777777742 378999999
Q ss_pred ccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccHHHH
Q 011567 254 VYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVV 332 (483)
Q Consensus 254 v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~~~~ 332 (483)
+.+.+|.+.|+++|.++|++||+++++|.++++|.+. ++++..++|++++|.+|.+|+.| |++..+++..
T Consensus 148 ~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~---------id~~~~~~D~~~~s~~Kl~gp~G~g~l~v~~~~~ 218 (371)
T PF00266_consen 148 VENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVP---------IDLDELGADFLVFSSHKLGGPPGLGFLYVRPEAI 218 (371)
T ss_dssp BETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS-----------TTTTTESEEEEESTSTTSSSTEEEEEEEHHHH
T ss_pred ccccccEEeeeceehhhhhccCCceeEechhcccccc---------ccccccccceeeecccccCCCCchhhheehhhhh
Confidence 9999999999999999999999999999999987653 34544577999999999445666 8888888888
Q ss_pred HHHHhcCCce------------------eecC-CCcHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhccCCCce
Q 011567 333 DHQRLSSSGY------------------VFSA-SLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLS 391 (483)
Q Consensus 333 ~~~~~~~~~~------------------~fs~-~~~p~~~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~~~~~~ 391 (483)
+.++....++ .|.. +.|.....+..++++.+.+. +.+.++..++.+++++.|.+++++.
T Consensus 219 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~ 298 (371)
T PF00266_consen 219 ERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIE 298 (371)
T ss_dssp HHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred hccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCcee
Confidence 8775332221 2332 34555566666788888532 4578889999999999999988877
Q ss_pred eec----CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccc---cccCCCCCceEEEccCCCCHHHH
Q 011567 392 IAS----NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSM---LDKCRLPVGIRLFVSAAHSEADL 464 (483)
Q Consensus 392 i~~----~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~---~~~~~~~~~lRi~~~~~~t~edi 464 (483)
+.+ ....+++.+.+.... ..++... |+++||.++.+.... .......+.||++++..+|++||
T Consensus 299 ~~~~~~~~~~~~i~~~~~~~~~---------~~~~~~~-L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv 368 (371)
T PF00266_consen 299 VLGPDDEPRRPSIVSFNLPGSD---------ADDVVKY-LEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDV 368 (371)
T ss_dssp ESSSSCGGBGTTEEEEEETTSS---------HHHHHHH-HHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHH
T ss_pred EeeecccccccceEEEeecCCC---------HHHHHHH-HhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHH
Confidence 754 234678888884321 1345554 444599998854322 00000125699999999999999
Q ss_pred HHH
Q 011567 465 VKA 467 (483)
Q Consensus 465 ~~~ 467 (483)
|++
T Consensus 369 ~~l 371 (371)
T PF00266_consen 369 DRL 371 (371)
T ss_dssp HHH
T ss_pred hhC
Confidence 975
No 208
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.91 E-value=2e-21 Score=192.37 Aligned_cols=318 Identities=17% Similarity=0.220 Sum_probs=233.0
Q ss_pred eEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC-CC-CEEEecccH-HHHHhh
Q 011567 110 EVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG-TP-DSILYSYGL-STMFSA 185 (483)
Q Consensus 110 ~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g-~e-~~i~~~sG~-~a~~~a 185 (483)
..+|+++| |++|.+ |.+.+++.+.++... .|. .+...++++.+++++| .+ +.|+.+.|+ +.+...
T Consensus 23 ~~i~LssNenP~gp~--~~~~~~~~~~~~~~~--------rYP-d~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l 91 (356)
T COG0079 23 GIIKLSSNENPYGPP--PKVIEAIRAALDKLN--------RYP-DPDYRELRAALAEYYGVVDPENVLVGNGSDELIELL 91 (356)
T ss_pred cceeecCCCCCCCCC--HHHHHHHHHHHHhhc--------cCC-CCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHH
Confidence 68999999 898874 889998888776421 121 1246889999999999 54 455555555 778888
Q ss_pred hhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCc
Q 011567 186 IPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQI 261 (483)
Q Consensus 186 i~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i 261 (483)
+++++.+||.|++..+.+..+...++..|.+++.++.. |++.+.+.+.+ + .++|++..++|+||..
T Consensus 92 ~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~---~-------~~lv~i~nPNNPTG~~ 161 (356)
T COG0079 92 VRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKEFRLDLDAILAAIRD---K-------TKLVFLCNPNNPTGTL 161 (356)
T ss_pred HHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccccccCHHHHHHhhhc---C-------CCEEEEeCCCCCCCCC
Confidence 99999999999999999999888999999999888774 44444433332 2 5678888888899999
Q ss_pred cChHHHHHHHHHc--CcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHHH
Q 011567 262 APLDELIRLKEKY--RFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQR 336 (483)
Q Consensus 262 ~~L~~l~~l~~k~--~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~ 336 (483)
.+.++|.++.+.. +.++++||+|.-+. +. ...+... . .+.-+++.||||++|..| ||+++++++++.++
T Consensus 162 ~~~~~l~~l~~~~~~~~~vVvDEAY~eF~-~~---~~~~l~~-~-~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~ 235 (356)
T COG0079 162 LPREELRALLEALPEGGLVVIDEAYIEFS-PE---SSLELLK-Y-PPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALN 235 (356)
T ss_pred CCHHHHHHHHHhCCCCcEEEEeCchhhcC-Cc---hhhhhcc-C-CCCEEEEEecHHhhhcchhceeeccCCHHHHHHHH
Confidence 9988888887765 88999999997542 11 1112111 1 222477899999999777 99999999999998
Q ss_pred hcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCce-eecCCCCCEEEEEecCCCCCchhh
Q 011567 337 LSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLS-IASNPESPIVFLILEKSTGSMKND 415 (483)
Q Consensus 337 ~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~-i~~~~~~~i~~l~l~~~~~~~~~~ 415 (483)
....+| +.+..+.+++.++++.-+...+..+++.+.++++.+.|+.+. +. +. +...+++.+++++
T Consensus 236 ~vr~p~----~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~-pS~aNFvlv~~~~-------- 301 (356)
T COG0079 236 KVRPPF----NVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVF-PSQANFVLVRVPD-------- 301 (356)
T ss_pred HhcCCC----CCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeec-CCCCcEEEEECCC--------
Confidence 877776 446667777777776554445678888899999999999874 44 44 3468899988753
Q ss_pred HHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 416 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 416 ~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
.. ...+.+.+ .++||+++....... .+..+||++ -|++|.++++++|+++++.
T Consensus 302 ~~-~~~l~~~L-~~~giivR~~~~~~~----~~~~lRitv---gt~een~~ll~AL~~~~~~ 354 (356)
T COG0079 302 AE-AAALAEAL-LKKGILVRDCSSVGL----LPGYLRITV---GTPEENDRLLAALREVLKG 354 (356)
T ss_pred cc-HHHHHHHH-HHCCEEEEeCCCCCC----CCCeEEEEe---CCHHHHHHHHHHHHHHHhc
Confidence 11 22456654 456999997643111 123599999 4889999999999988753
No 209
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.91 E-value=2.4e-21 Score=195.08 Aligned_cols=290 Identities=16% Similarity=0.185 Sum_probs=203.7
Q ss_pred hHHHHHHHHHHHhhhCCCC---EE-EecccHHHHHhhhhhhccCCc-EEEEcCCchhHH-HhHhhhcCCeEEEecCC---
Q 011567 153 IDVHLDCEARIAKFLGTPD---SI-LYSYGLSTMFSAIPCFCKKGD-LIVADEGVHWGI-QNGLYLSRSTVVYFKHN--- 223 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e~---~i-~~~sG~~a~~~ai~~~~~~gd-iI~~~~~~h~s~-~~g~~~s~~~v~~~~~~--- 223 (483)
.+...++++.+++++|.+. .+ +.++|++++..++.++..++| +|+....+|+.. ...++..|.+++.++.+
T Consensus 34 ~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~~~ 113 (363)
T TIGR02326 34 NIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGEVE 113 (363)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCCC
Confidence 3567889999999999752 34 558889999999988876665 556666666663 44456677777766543
Q ss_pred --CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccC
Q 011567 224 --DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCG 301 (483)
Q Consensus 224 --d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~ 301 (483)
|++++++.+++.. .++++.+..+.+++|.+.|+++|.++|++||+++++|+++++|... ++
T Consensus 114 ~~d~~~l~~~l~~~~--------~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~---------~~ 176 (363)
T TIGR02326 114 PPDVVEVEAILAADP--------AITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIP---------ID 176 (363)
T ss_pred CCCHHHHHHHHhhCC--------CccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcc---------cc
Confidence 6788888776532 1456666777788999999999999999999999999999876432 22
Q ss_pred CCCCceeEEEccccccc-cCCC-ceeeccHHHHHHHHhcCC------------------ceeecCCCcHHHHHHHHHHHH
Q 011567 302 VPVDKIDIVTAAMGHAL-ATEG-GFCTGSARVVDHQRLSSS------------------GYVFSASLPPYLASAAITAID 361 (483)
Q Consensus 302 v~~~~~Di~~~s~~K~l-g~~G-G~i~~~~~~~~~~~~~~~------------------~~~fs~~~~p~~~aaa~~al~ 361 (483)
+...++|++++|++|++ |+.| ||++.+++.++.+..... .+.|+. ++....+..++++
T Consensus 177 ~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~--~~~~~~al~~al~ 254 (363)
T TIGR02326 177 IAELHIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTS--PTHVVHAFAQALL 254 (363)
T ss_pred hhhcCccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCC--cHHHHHHHHHHHH
Confidence 33335699999999998 5566 999998887776432111 123433 5556666667777
Q ss_pred HHhcC---cHHHHHHHHHHHHHHHhhccCCCceeecCC--CCCE-EEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEE
Q 011567 362 VLEEN---PDLITKLKKNTAILRTGLSDIHGLSIASNP--ESPI-VFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVV 435 (483)
Q Consensus 362 ~l~~~---~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~--~~~i-~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~ 435 (483)
.+.+. +++.++++++.+++++.|+++ |+.+...+ .+++ ..+.+.+... ....++.+. |+++||.+.
T Consensus 255 ~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~-L~~~gi~v~ 326 (363)
T TIGR02326 255 ELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSPEDPD------YRFADFYQR-LKEQGFVIY 326 (363)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECCCCCC------CCHHHHHHH-HHHCCEEEE
Confidence 66432 457889999999999999886 77765432 4554 4565532100 012245665 455699998
Q ss_pred eecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 436 TSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 436 ~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
++..+. +..+|+++...+|.+|+++++++|++++
T Consensus 327 ~g~~~~------~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 327 PGKVSQ------VDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred CCcCCC------CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 664321 2459999877899999999999998875
No 210
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.91 E-value=2.6e-22 Score=202.86 Aligned_cols=214 Identities=14% Similarity=0.188 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHh----HhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~----g~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+||++||+++|.+.++++++|++|+..++.++.++||.|+++...|.+... .+...|.++..++.+|+++++
T Consensus 59 p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~l~ 138 (391)
T TIGR01328 59 PTVSNLEGRIAFLEGTEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEEVK 138 (391)
T ss_pred chHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHHHH
Confidence 4578999999999999999999999999999999999999999999887765433 344567888888877887777
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+.. ++++|++|.+++++|.+.|+++|.++|++||+++|+|++++.+..++ . .+ ...|+
T Consensus 139 ~~i~~----------~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~---~----~~---~g~Di 198 (391)
T TIGR01328 139 AHIKD----------NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTN---P----VA---LGVDV 198 (391)
T ss_pred Hhhcc----------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCC---c----hh---cCCCE
Confidence 76642 37899999999999999999999999999999999999998765432 1 11 23489
Q ss_pred EEccccccccCC----CceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhc
Q 011567 310 VTAAMGHALATE----GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLS 385 (483)
Q Consensus 310 ~~~s~~K~lg~~----GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~ 385 (483)
++.|++|.+|+. ||++++++++++.++.......++..++|..++.++..++.+ +..+++..++++.+.+.|+
T Consensus 199 vv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~tl---~~r~~~~~~na~~la~~L~ 275 (391)
T TIGR01328 199 VVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKTL---NIRMKRHSENAMKVAEYLK 275 (391)
T ss_pred EEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCcH---HHHHHHHHHHHHHHHHHHH
Confidence 999999999843 588999999888776533233345567888888777666544 3467888899999999998
Q ss_pred cCCCc
Q 011567 386 DIHGL 390 (483)
Q Consensus 386 ~~~~~ 390 (483)
+.+++
T Consensus 276 ~~p~v 280 (391)
T TIGR01328 276 SHPAV 280 (391)
T ss_pred hCCCc
Confidence 87654
No 211
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.91 E-value=1.6e-21 Score=200.77 Aligned_cols=345 Identities=17% Similarity=0.177 Sum_probs=233.4
Q ss_pred eeEEEeecCCC-CCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----CC---CCEEEe-cccH
Q 011567 109 KEVVNFASANY-LGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT---PDSILY-SYGL 179 (483)
Q Consensus 109 ~~~id~~s~~~-lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g~---e~~i~~-~sG~ 179 (483)
...++|..++. ..+-+...+.++..+.++.++.... ..|++..-..+|++.+++++ |. ++-|+. ++..
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~---~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q 165 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLA---LQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQ 165 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhh---hcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHH
Confidence 57889988742 1332445667777777765543311 12333233445555555554 42 244555 5555
Q ss_pred HHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC----CHHHHHHHHHHhhhhhhhccCccEEEEEeccc
Q 011567 180 STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVY 255 (483)
Q Consensus 180 ~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~ 255 (483)
+|+..+.+.++++||.|+++.+.|......++..|.+++.++.+ |++.||+.+++... +.++++...+
T Consensus 166 ~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~--------k~~y~~P~~q 237 (459)
T COG1167 166 QALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKP--------KAVYVTPTFQ 237 (459)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCC--------cEEEECCCCC
Confidence 88999999999999999999999999999999999999988765 79999999877521 3444445556
Q ss_pred CCCCCccCh---HHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEcccccccc--CCCceeeccHH
Q 011567 256 QNSGQIAPL---DELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA--TEGGFCTGSAR 330 (483)
Q Consensus 256 ~~~G~i~~L---~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg--~~GG~i~~~~~ 330 (483)
|++|...++ ++|.++|++|++++|.||.|+...+.. .........+..+..|+++||||++. ..-||++++++
T Consensus 238 NPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~--~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~ 315 (459)
T COG1167 238 NPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDG--PPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPE 315 (459)
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCC--CCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHH
Confidence 779999995 789999999999999999999866542 22222234444566899999999996 44599999999
Q ss_pred HHHHHHhcCCceeecCCCcHHHHHHHHHHHH--HHh-cCcHHHHHHHHHHHHHHHhhccCC--CceeecCCCCCEEEEEe
Q 011567 331 VVDHQRLSSSGYVFSASLPPYLASAAITAID--VLE-ENPDLITKLKKNTAILRTGLSDIH--GLSIASNPESPIVFLIL 405 (483)
Q Consensus 331 ~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~--~l~-~~~~~~~~l~~~~~~l~~~L~~~~--~~~i~~~~~~~i~~l~l 405 (483)
+++++.........++ +.+...+...-+. .++ ....++..++++.+.+.+.|.+.. +..+..+..+.++|+.+
T Consensus 316 ~~~~~~~~k~~~~~~~--s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l 393 (459)
T COG1167 316 LIEKLLRLKQAADLGP--SSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLEL 393 (459)
T ss_pred HHHHHHHHHHHhcCCC--ChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEc
Confidence 9888765443333333 3333232222222 011 124567777788888888887763 34555555677888888
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHhCCEEEEe-ecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 406 EKSTGSMKNDLQLLEDIADWALKEDGVFVVT-SKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 406 ~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~-~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
+.... ..++...++++ |+.+.+ +........ ..+.+|++++. .+++++++++..|.+++++..
T Consensus 394 ~~~~~--------~~~l~~~a~~~-gv~i~~~g~~f~~~~~-~~~~~Rl~~s~-~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 394 PEGID--------ARELLAAALEK-GVVVTPLGSAFSADGD-PRNGLRLSFSS-PSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred CCCCC--------HHHHHHHHHHC-CCEEEcCCccccCCCC-CCCeEEEEcCC-CCHHHHHHHHHHHHHHHHHHh
Confidence 65421 33567776665 888877 544332211 23469999876 569999999999999988764
No 212
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=3.6e-21 Score=192.70 Aligned_cols=317 Identities=15% Similarity=0.187 Sum_probs=217.5
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEeccc-HHHHHhhhhh
Q 011567 111 VVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILYSYG-LSTMFSAIPC 188 (483)
Q Consensus 111 ~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~~sG-~~a~~~ai~~ 188 (483)
.++|..+.. .+..++.+.+++.+.+...... .|+. +...++++.+|++++.+ +.+++++| ++++..++.+
T Consensus 24 ~~~l~~~~~-~~~~p~~~~~a~~~~~~~~~~~------~y~~-~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~ 95 (351)
T PRK14807 24 KYKMDANET-PFELPEEVIKNIQEIVKSSQVN------IYPD-PTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLA 95 (351)
T ss_pred eeEccCCCC-CCCCCHHHHHHHHHHhhcCccc------CCCC-ccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHH
Confidence 477777632 3334588999988877532221 1222 22478999999999864 45556555 5678888899
Q ss_pred hccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC
Q 011567 189 FCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP 263 (483)
Q Consensus 189 ~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~ 263 (483)
++++||.|+++.+++......++..|.+++.++.+ |++++++.+... ++++|++..+++++|.+.+
T Consensus 96 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~---------~~k~v~l~~p~NPtG~~~~ 166 (351)
T PRK14807 96 FINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKY---------QPKLVFLCNPNNPTGSVIE 166 (351)
T ss_pred hcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhcc---------CCCEEEEeCCCCCCCCCCC
Confidence 99999999999998887777778888888877543 566676665431 2566666788999999999
Q ss_pred hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHHHhcCC
Q 011567 264 LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSS 340 (483)
Q Consensus 264 L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~~~~~ 340 (483)
.+++.++|++++.++|+||+|... .+. ......+ ..+..|+++||||++|.+| ||+++++++++.++....
T Consensus 167 ~~~l~~l~~~~~~~~ivDe~y~~~-~~~---~~~~~~~--~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~ 240 (351)
T PRK14807 167 REDIIKIIEKSRGIVVVDEAYFEF-YGN---TIVDVIN--EFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKS 240 (351)
T ss_pred HHHHHHHHHhCCCEEEEeCcchhh-ccc---chHHHhh--hCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccC
Confidence 999999999999999999999643 232 1111111 1233688999999998777 999999999998875433
Q ss_pred ceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHH
Q 011567 341 GYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLE 420 (483)
Q Consensus 341 ~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~ 420 (483)
.+ + .+++...++.+.++.- ...+..+.++++.+.+.+.|++++|+.+. +++++++++.+.+ ..
T Consensus 241 ~~--~--~~~~~q~~~~~~l~~~-~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~i~~~~-----------~~ 303 (351)
T PRK14807 241 PY--N--INSLSQVIALKVLRTG-VLKERVNYILNERERLIKELSKIPGIKVY-PSKTNFILVKFKD-----------AD 303 (351)
T ss_pred CC--C--cCHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cCCccEEEEEcCC-----------HH
Confidence 32 2 2445555555555421 12345566777888888888877787765 4567777777631 22
Q ss_pred HHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 421 DIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 421 ~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
++++.++ ++||.+.+.... ...++.+||++. +.++.++++++|++++
T Consensus 304 ~~~~~l~-~~gV~v~~~~~~----~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 304 YVYQGLL-ERGILVRDFSKV----EGLEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred HHHHHHH-HCCEEEEECCCC----CCCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 4566555 459999764211 012355999985 6788999999988753
No 213
>PRK03321 putative aminotransferase; Provisional
Probab=99.91 E-value=9.6e-22 Score=197.11 Aligned_cols=315 Identities=18% Similarity=0.195 Sum_probs=216.7
Q ss_pred eEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEecccH-HHHHhhh
Q 011567 110 EVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILYSYGL-STMFSAI 186 (483)
Q Consensus 110 ~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~~sG~-~a~~~ai 186 (483)
.++||.++ +.+|. .+.+.+++.+.+.... .|+ .....++++.+|++++.+ +.+++++|+ +++..++
T Consensus 23 ~~i~l~~~~~~~~~--~~~~~~a~~~~~~~~~--------~y~-~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~ 91 (352)
T PRK03321 23 GAIKLSSNETPFGP--LPSVRAAIARAAAGVN--------RYP-DMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLV 91 (352)
T ss_pred cceeccCCCCCCCC--CHHHHHHHHHHHHhcC--------cCC-CCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHH
Confidence 47999887 44443 4788888887765421 121 123678999999999864 456666666 5566677
Q ss_pred hhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCc
Q 011567 187 PCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQI 261 (483)
Q Consensus 187 ~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i 261 (483)
.++.++||.|+++.+.+......++..|.+++.++.+ |++++++.++. ++++|++..+++++|.+
T Consensus 92 ~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~----------~~~~v~l~~p~NPtG~~ 161 (352)
T PRK03321 92 QATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAITD----------RTRLIFVCNPNNPTGTV 161 (352)
T ss_pred HHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhcc----------CCCEEEEeCCCCCcCCC
Confidence 8888999999999888777766777788888877654 45666655532 25566677888999999
Q ss_pred cChHHHHHHHHH--cCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHHH
Q 011567 262 APLDELIRLKEK--YRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQR 336 (483)
Q Consensus 262 ~~L~~l~~l~~k--~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~ 336 (483)
.|.+++.++|++ +++++|+||+|.....+........... ..+..++++|+||+||..| ||+++++++++.++
T Consensus 162 ~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~--~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~ 239 (352)
T PRK03321 162 VTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVR--DHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALR 239 (352)
T ss_pred cCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHh--hCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHH
Confidence 999999999987 5999999999986554321111111111 1223578899999998666 99999999999887
Q ss_pred hcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhH
Q 011567 337 LSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDL 416 (483)
Q Consensus 337 ~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~ 416 (483)
.....+ +.+++...++.++++..+...+..+++.++...+.+.|.+. ++.+.. +.++++++.+.. +
T Consensus 240 ~~~~~~----~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~-~~g~~i~i~l~~-------~- 305 (352)
T PRK03321 240 KVAVPF----SVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA-GWTVPP-SQANFVWLPLGE-------R- 305 (352)
T ss_pred HhcCCC----CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccCC-CCCCEEEEeCCC-------C-
Confidence 543222 33566666666666433222334455555667788888775 666543 467888877631 1
Q ss_pred HHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 417 QLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 417 ~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
..++++.+ +++||.+.+.. .++|||++ .+.+++++++++|++++.
T Consensus 306 --~~~~~~~l-~~~gI~v~~~~---------~~~iRi~~---~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 306 --TADFAAAA-AEAGVVVRPFA---------GEGVRVTI---GAPEENDAFLRAARAWRA 350 (352)
T ss_pred --HHHHHHHH-HHCCEEEEccC---------CCcEEEee---CCHHHHHHHHHHHHHHhc
Confidence 23567764 55799997621 23599998 589999999999998753
No 214
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.91 E-value=1.5e-21 Score=195.99 Aligned_cols=324 Identities=15% Similarity=0.129 Sum_probs=208.5
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC----CEEEe-cccHHH
Q 011567 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP----DSILY-SYGLST 181 (483)
Q Consensus 107 ~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e----~~i~~-~sG~~a 181 (483)
++++++||.+++.... ..|.+.+++.+...... .+ ...|..++..++++.+.+.+|.. +.++. ++++++
T Consensus 19 ~~~~~i~l~~~~p~~~-~~~~~~~~~~~~~~~~~--Y~---~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~ 92 (357)
T TIGR03539 19 HPDGIVDLSVGTPVDP-VPPLIRAALAAAADAPG--YP---QTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKEL 92 (357)
T ss_pred CCCCeEEccCCCCCCC-CCHHHHHHHHHHHhhCC--CC---cccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHH
Confidence 4567899999865322 45777787766544211 11 13344555556666665554532 45555 555677
Q ss_pred HHhhhhhh-ccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCC
Q 011567 182 MFSAIPCF-CKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQ 260 (483)
Q Consensus 182 ~~~ai~~~-~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~ 260 (483)
+..++.++ +++||.|+++.+.|..+...+...|.+++.++ |++.++. . ++++|+++.++|++|.
T Consensus 93 i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~l~~------~-------~~~~v~~~~p~NPtG~ 157 (357)
T TIGR03539 93 VAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD--DPTELDP------V-------GPDLIWLNSPGNPTGR 157 (357)
T ss_pred HHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC--ChhhcCc------c-------CccEEEEeCCCCCcCc
Confidence 77777877 79999999999999988888888888887763 4332221 1 3677778889999999
Q ss_pred ccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccc--cCCCCCceeEEEccccccccCCC---ceeeccHHHH
Q 011567 261 IAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEH--CGVPVDKIDIVTAAMGHALATEG---GFCTGSARVV 332 (483)
Q Consensus 261 i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~--~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~ 332 (483)
..+ +++|.++|++||+++|+||+|....++......... .+.. .+..|+++||||.++.+| ||++++++++
T Consensus 158 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~ 236 (357)
T TIGR03539 158 VLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGD-HTGLLAVHSLSKRSNLAGYRAGFVAGDPALV 236 (357)
T ss_pred cCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCc-cccEEEEeccccccCCCceeEEEEecCHHHH
Confidence 987 778999999999999999999753332211111100 0111 123588999999997555 9999999988
Q ss_pred HHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCc
Q 011567 333 DHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSM 412 (483)
Q Consensus 333 ~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~ 412 (483)
+.++.......+ +.++....++.++++.-......++.++++.+.+.+.|++. |+.+..+..+.++++.++.
T Consensus 237 ~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~p~~~~~~~~~~~~----- 308 (357)
T TIGR03539 237 AELLTVRKHAGL--MVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA-GFRIDHSEAGLYLWATRGE----- 308 (357)
T ss_pred HHHHHHHhhccc--CCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCCCcCCCccEEEEEECCC-----
Confidence 877543322222 23455555555555321112345677778888898998885 7766544445456665521
Q ss_pred hhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHH
Q 011567 413 KNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESL 471 (483)
Q Consensus 413 ~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l 471 (483)
+ ..++.+. |.++||.+.+..+.... .+..+||++.. ++++++++++.|
T Consensus 309 --~---~~~~~~~-l~~~gV~v~pg~~f~~~---~~~~iRis~~~--~~~~i~~~~~~l 356 (357)
T TIGR03539 309 --D---AWDTVDR-LAELGILVAPGDFYGPA---GSQHVRVALTA--TDERIAAAVARL 356 (357)
T ss_pred --C---HHHHHHH-HHhCCEEECCccccCCC---CCCeEEEEecC--CHHHHHHHHHhh
Confidence 1 2245665 45679999887643211 12459999975 689999988765
No 215
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.6e-21 Score=195.86 Aligned_cols=319 Identities=15% Similarity=0.151 Sum_probs=222.2
Q ss_pred CeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC--CEEEecccH-HHHH
Q 011567 108 GKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGL-STMF 183 (483)
Q Consensus 108 G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e--~~i~~~sG~-~a~~ 183 (483)
+++++||..+ |.++ ..|.+++++.+.+...... .|.. ....+|++.+|++++.+ +.+++++|+ +++.
T Consensus 25 ~~~~i~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~------~Y~~-~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~ 95 (356)
T PRK04870 25 ATGMVKLDAMENPYR--LPAELRAELGERLAEVALN------RYPD-PRAAALKAALRAAMGVPAGADVLLGNGSDELIQ 95 (356)
T ss_pred CCCceeCcCCCCCCC--CCHHHHHHHHHHhhccccc------cCCC-CCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHH
Confidence 4578999887 5444 4589999999888652221 1221 12478999999999864 356666665 6777
Q ss_pred hhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCC
Q 011567 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNS 258 (483)
Q Consensus 184 ~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~ 258 (483)
.++.+++++||.|+++.++|..+...++..|.+++.++.+ |++++++.+... ++++|++...++++
T Consensus 96 ~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~---------~~~~v~l~~p~NPt 166 (356)
T PRK04870 96 LLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEH---------RPALVFLAYPNNPT 166 (356)
T ss_pred HHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC---------CCCEEEEcCCCCCC
Confidence 8888899999999999999999888888999998887653 567777666432 24566666678899
Q ss_pred CCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHH
Q 011567 259 GQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQ 335 (483)
Q Consensus 259 G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~ 335 (483)
|.+.+.+++.++++..+.++|+||+|.... + ...... +...+..+++.|+|| ++..| ||+++++++++.+
T Consensus 167 G~~~~~~~~~~i~~~~~~~ii~De~y~~~~-~---~~~~~~--~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~ 239 (356)
T PRK04870 167 GNLFDDADVERIIEAAPGLVVVDEAYQPFA-G---DSWLPR--LARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAEL 239 (356)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEECCchhhc-C---cchHHH--HhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHH
Confidence 999998888888877789999999996432 1 111111 111223688999999 77666 9999999999887
Q ss_pred HhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 011567 336 RLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 415 (483)
Q Consensus 336 ~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~ 415 (483)
+.....+ +.+.+...++..+++..+...+.+++++++.+.+.+.|++++++.+. ++.+.++++.+++
T Consensus 240 ~~~~~~~----~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~-------- 306 (356)
T PRK04870 240 DKVRPPY----NVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANFILVRVPD-------- 306 (356)
T ss_pred HHccCCC----cCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECCC--------
Confidence 6544332 23444444455555432222346777888899999999887787665 4467777777631
Q ss_pred HHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 416 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 416 ~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
..++.+. |+++||.+.+..... ...+..+||++. +.+++++++++|+++
T Consensus 307 ---~~~~~~~-l~~~gI~v~~~~~f~---~~~~~~iRis~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 307 ---AAAVFDG-LKTRGVLVKNLSGMH---PLLANCLRVTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred ---HHHHHHH-HHHCCEEEEECCCCC---CCCCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence 1245554 556799998764321 011345999985 789999999999875
No 216
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.91 E-value=2.5e-22 Score=203.06 Aligned_cols=287 Identities=15% Similarity=0.144 Sum_probs=201.7
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhh----cCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYL----SRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~----s~~~v~~~~~~d~~~Le 229 (483)
+...+||+.+|+++|.++++++++|++|+..++.+++++||.|+++.+.|+.....+.. .+.++..++..|+++++
T Consensus 61 pt~~~Le~~lA~l~G~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l~ 140 (386)
T PRK06767 61 PTVKLFEERMAVLEGGEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADIE 140 (386)
T ss_pred cchHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHH
Confidence 45689999999999999999999999999999999999999999999988876655432 24455555556777776
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+.. ++++|++|.+++++|.+.|+++|.++|+++|+++|+||+|+.+..+ +.+ . ..+|+
T Consensus 141 ~~i~~----------~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~---~pl------~-~g~Di 200 (386)
T PRK06767 141 NKIRP----------NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQ---RPL------E-LGCDA 200 (386)
T ss_pred HhhCc----------CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccC---Cch------h-cCCcE
Confidence 66532 2689999999999999999999999999999999999999755433 111 1 23489
Q ss_pred EEccccccccCC----CceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhc
Q 011567 310 VTAAMGHALATE----GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLS 385 (483)
Q Consensus 310 ~~~s~~K~lg~~----GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~ 385 (483)
++.|++|.+++. ||+++++++.++.++..... .+++.++|+.+++++..++.+ +...++.++++..+.+.|+
T Consensus 201 v~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~-~~g~~~~~~~a~l~~~~L~tl---~~r~~~~~~~a~~la~~L~ 276 (386)
T PRK06767 201 VVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRK-DIGGIMAPFDAWLLLRGLKTL---AVRMDRHCDNAEKIVSFLK 276 (386)
T ss_pred EEecCcceecCCCCceeEEEEeChHHHHHHHHHHHH-HhCCCCCHHHHHHHHcCCCcH---HHHHHHHHHHHHHHHHHHH
Confidence 999999999754 68999998877664322111 223446788777666665544 3477888999999999999
Q ss_pred cCCCceeec-----------CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc-------ccCC-
Q 011567 386 DIHGLSIAS-----------NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML-------DKCR- 446 (483)
Q Consensus 386 ~~~~~~i~~-----------~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~-------~~~~- 446 (483)
+++++..+. ...+.++.+.++. ......++++. |+..++.++-+...++ .+..
T Consensus 277 ~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~-------~~~~~~~f~~~-l~~~~~~~s~G~~~sl~~~p~~~~~~~~ 348 (386)
T PRK06767 277 NHDAVEGVWYPEGELASRQMKRGGGVISFSIKG-------GKEETQAFIND-LHFITIAVSLGDTETLIQHPATMTHAAI 348 (386)
T ss_pred cCCCccEEECCCcHHHHHhCCCCCceEEEEEcC-------CHHHHHHHHHh-CCccEEecCCCCcCccccCCCccccccC
Confidence 988876432 1245688888842 12234466664 4444555554433221 0000
Q ss_pred ---------CCC-ceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 447 ---------LPV-GIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 447 ---------~~~-~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
.++ -||+++.. ||.+.+++-|++++.
T Consensus 349 ~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~ 384 (386)
T PRK06767 349 PAELRQEMGIYDNLIRLSVGL----ESWEDIVSDLEQALK 384 (386)
T ss_pred CHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 112 39999976 556666666666654
No 217
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.90 E-value=4.6e-21 Score=195.13 Aligned_cols=297 Identities=15% Similarity=0.163 Sum_probs=212.2
Q ss_pred hHHHHHHHHHHHhhhCCC--C-EEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHH--hHhhhcCCeEEEecCC----
Q 011567 153 IDVHLDCEARIAKFLGTP--D-SILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ--NGLYLSRSTVVYFKHN---- 223 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e--~-~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~--~g~~~s~~~v~~~~~~---- 223 (483)
.+...++++.+++++|.+ + .++.++|++++..++..+.++||.|++....|++.. ..++..|.+++.++.+
T Consensus 41 ~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~ 120 (401)
T PLN02409 41 PALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQG 120 (401)
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCCC
Confidence 467789999999999874 2 455588889999999888899998888887776653 4455667787777643
Q ss_pred -CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHH--HHHcCcEEEEeCccccccccCCCCcccccc
Q 011567 224 -DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRL--KEKYRFRVFLDESNSFGVLGRSGRGLTEHC 300 (483)
Q Consensus 224 -d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l--~~k~~~~li~DEa~s~g~lg~~G~g~~~~~ 300 (483)
|++++++.+++... .++++|++.++.+.+|.+.|+++|.++ |+++|+++++|++++.|... .
T Consensus 121 ~~~~~l~~~l~~~~~------~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~---------i 185 (401)
T PLN02409 121 ADLDILKSKLRQDTN------HKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALD---------F 185 (401)
T ss_pred CCHHHHHHHHhhCcC------CCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCcc---------c
Confidence 57778777764210 126788888888889999999999999 99999999999999865321 2
Q ss_pred CCCCCceeEEEcccccccc-CCC-ceeeccHHHHHHHHhcC-Ccee--------------e-cCCCcHHHHHHHHHHHHH
Q 011567 301 GVPVDKIDIVTAAMGHALA-TEG-GFCTGSARVVDHQRLSS-SGYV--------------F-SASLPPYLASAAITAIDV 362 (483)
Q Consensus 301 ~v~~~~~Di~~~s~~K~lg-~~G-G~i~~~~~~~~~~~~~~-~~~~--------------f-s~~~~p~~~aaa~~al~~ 362 (483)
+++..++|++++|.+|+|+ +.| ||++.+++.++.+.... .++. + ..+.|.....+..++++.
T Consensus 186 d~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~ 265 (401)
T PLN02409 186 RMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDL 265 (401)
T ss_pred cccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHH
Confidence 3332356999999999995 454 88888888877765321 1111 1 113344456667788888
Q ss_pred HhcC--cHHHHHHHHHHHHHHHhhccCCCceeecCC---CCC-EEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEe
Q 011567 363 LEEN--PDLITKLKKNTAILRTGLSDIHGLSIASNP---ESP-IVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVT 436 (483)
Q Consensus 363 l~~~--~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~---~~~-i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~ 436 (483)
+.+. +.+.++.+++.+++++.|+++ |+++..+. .++ +.++.++... + ..++...+++++||.+..
T Consensus 266 ~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~p~~~-----~---~~~l~~~l~~~~~i~i~~ 336 (401)
T PLN02409 266 IFEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAVVVPEGI-----D---SAEIVKNAWKKYNLSLGL 336 (401)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEEeCCCCC-----C---HHHHHHHHHHhCCEEEEc
Confidence 7643 467888999999999999886 88776531 243 4445553211 1 224666666778999987
Q ss_pred ecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 437 SKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 437 ~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
+..+.- ...+||+....+|++|+..++++|++++.++
T Consensus 337 G~~~~~-----~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 337 GLNKVA-----GKVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred CCCccc-----CCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 643211 2349999999999999999999999988764
No 218
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.90 E-value=3.2e-21 Score=191.37 Aligned_cols=302 Identities=13% Similarity=0.070 Sum_probs=204.5
Q ss_pred eeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhh
Q 011567 109 KEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIP 187 (483)
Q Consensus 109 ~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~ 187 (483)
.+++|+++| |++|.... .+.+ ..+..|.. + ..+|++.|++++|.++.++.+++.+++..+.
T Consensus 20 ~~~i~l~~ne~p~~~~~~-~~~~---~~~~~yp~---------~----~~~Lr~~ia~~~~~~~I~it~Gs~~al~~~~- 81 (330)
T PRK05664 20 ADWLDLSTGIAPWPWPVP-AIPA---DAWARLPE---------T----DDGLEAAARAYYGAPQLLPVAGSQAAIQALP- 81 (330)
T ss_pred HHheeecCCcCCCCCCCc-ccCH---HHHHhCCC---------C----hHHHHHHHHHHhCCCCEEECcCHHHHHHHHH-
Confidence 468999999 88888433 3322 33444521 1 1688999999999876666666667877664
Q ss_pred hhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC---h
Q 011567 188 CFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP---L 264 (483)
Q Consensus 188 ~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~---L 264 (483)
...+||.|+++.+++..+...++..|.+++.++. +++++.+.. ...++++.| +|+||.+.+ +
T Consensus 82 -~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~---~~~~~~~~~----------~~~v~l~nP-~NPTG~~~s~~~l 146 (330)
T PRK05664 82 -RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE---AEVEAALDS----------LDVLVVVNP-NNPTGRRFDPARL 146 (330)
T ss_pred -HccCCCEEEEcCCChHHHHHHHHHcCCeEEEech---hhHhhhhcC----------CCEEEEeCC-cCCCCCccCHHHH
Confidence 3579999999999999999999999999988864 345544421 234455544 689999998 6
Q ss_pred HHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHHHhcCCc
Q 011567 265 DELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSG 341 (483)
Q Consensus 265 ~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~~~~~~ 341 (483)
++|+++|+++|+++|+||+|..+. + ...+. ...+.+..++++||||++|.+| ||+++++++++.+......
T Consensus 147 ~~l~~~~~~~~~~iI~DE~y~~~~--~-~~s~~---~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~~ 220 (330)
T PRK05664 147 LAWHARLAARGGWLVVDEAFMDNT--P-QHSLA---ACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGP 220 (330)
T ss_pred HHHHHHHHhcCCEEEEECCcccCC--C-ccccc---ccccCCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcCC
Confidence 667777899999999999996432 1 11111 2222333588999999999888 9999999999888755433
Q ss_pred eeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHH
Q 011567 342 YVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLED 421 (483)
Q Consensus 342 ~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~ 421 (483)
+ +.+.....++.++|+........++.++++.+++.+.|++. ++... .+...++++.+. + ..+
T Consensus 221 ~----~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~-~~~~~f~~~~~~--------~---~~~ 283 (330)
T PRK05664 221 W----TVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH-GLTPA-GGCALFQWVRTE--------D---AAA 283 (330)
T ss_pred C----CCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCcceEEEEecC--------C---HHH
Confidence 2 22445555566666533222356788888889999999886 65421 112234444431 1 235
Q ss_pred HHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 422 IADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 422 i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
+.+.+ .++||.+.... .++.+||++.. ++++++++.++|+++.++
T Consensus 284 ~~~~l-~~~gi~v~~f~--------~~~~iRis~~~--~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 284 LHEFL-ARRGILTRLFE--------QPASLRFGLPA--DEADWARLDQALLAYRKE 328 (330)
T ss_pred HHHHH-HHCCeEEEECC--------CCCeEEEECCC--CHHHHHHHHHHHHHHHhh
Confidence 66654 45699997431 13569999874 678899999998877554
No 219
>PRK14012 cysteine desulfurase; Provisional
Probab=99.90 E-value=3.1e-21 Score=196.91 Aligned_cols=334 Identities=14% Similarity=0.145 Sum_probs=213.0
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHH---hcCCCCCCCCC-cccChHHHHHHHHHHHhhhCCC--CEEEecccHHHHH
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALE---KYGVGSCGPRG-FYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMF 183 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~---~~g~g~~~~~~-~~g~~~~~~~l~~~La~~~g~e--~~i~~~sG~~a~~ 183 (483)
-|+|.++. +. .++.+.+++.+.+. .++........ .+...+...++++.+++++|.+ +.++.++|++++.
T Consensus 5 iyld~a~~---~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~ 80 (404)
T PRK14012 5 IYLDYSAT---TP-VDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDN 80 (404)
T ss_pred EEecCcCC---CC-CCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHH
Confidence 46776664 33 56788899888886 23221110000 0111246778999999999975 3666688889988
Q ss_pred hhhhhhc----cCCcEEEEcCCchhHHHhHhh---hcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEE
Q 011567 184 SAIPCFC----KKGDLIVADEGVHWGIQNGLY---LSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVV 251 (483)
Q Consensus 184 ~ai~~~~----~~gdiI~~~~~~h~s~~~g~~---~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~ 251 (483)
.++.++. ++||.|+++...|.+...... ..|.+++.++.+ |+++|++.+.+ ++++|++
T Consensus 81 ~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~~----------~t~lv~~ 150 (404)
T PRK14012 81 LAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMRD----------DTILVSI 150 (404)
T ss_pred HHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcCC----------CCEEEEE
Confidence 8877653 789999999999987754433 347777776543 67777776643 2678999
Q ss_pred ecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccHH
Q 011567 252 EAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSAR 330 (483)
Q Consensus 252 e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~~ 330 (483)
..+++++|.+.|+++|.++|++||+++|+|+++++|... +++....+|++++|++|.+|+.| |+++.+++
T Consensus 151 ~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~g~G~l~~~~~ 221 (404)
T PRK14012 151 MHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVP---------IDLSKLKVDLMSFSAHKIYGPKGIGALYVRRK 221 (404)
T ss_pred ECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcc---------cCcccCCCCEEEEehhhccCCCceEEEEEecC
Confidence 999999999999999999999999999999999876432 12222346999999999888655 66655544
Q ss_pred HHHHHHh--cCCce--eec-CCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCceeecCC--C-CCEE
Q 011567 331 VVDHQRL--SSSGY--VFS-ASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNP--E-SPIV 401 (483)
Q Consensus 331 ~~~~~~~--~~~~~--~fs-~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~--~-~~i~ 401 (483)
....+.. .+.+. .|. ++.+.....+..++++.++. ..+..++.+++.+++.+.|++++++.+.+.. . .+..
T Consensus 222 ~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~ 301 (404)
T PRK14012 222 PRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNL 301 (404)
T ss_pred CCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEE
Confidence 3221111 11110 021 12333334444456665543 2346788888999999999888777665321 2 2233
Q ss_pred EEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccc--------------cCCCCCceEEEccCCCCHHHHHHH
Q 011567 402 FLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLD--------------KCRLPVGIRLFVSAAHSEADLVKA 467 (483)
Q Consensus 402 ~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~--------------~~~~~~~lRi~~~~~~t~edi~~~ 467 (483)
.+.+.... . .++... |+ ++.+......... ....+..||++++..+|++|+|++
T Consensus 302 ~~~~~~~~----~-----~~~~~~-l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~ 369 (404)
T PRK14012 302 NVSFNYVE----G-----ESLIMA-LK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYA 369 (404)
T ss_pred EEEEeCcC----H-----HHHHHh-CC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHH
Confidence 33332111 1 134442 33 5555443221100 001124599999999999999999
Q ss_pred HHHHHHHHHHH
Q 011567 468 CESLKRISAVV 478 (483)
Q Consensus 468 ~~~l~~~~~~~ 478 (483)
+++|+++++++
T Consensus 370 ~~~l~~~~~~~ 380 (404)
T PRK14012 370 IELVRKSIGKL 380 (404)
T ss_pred HHHHHHHHHHH
Confidence 99999988764
No 220
>PLN02672 methionine S-methyltransferase
Probab=99.90 E-value=4.4e-21 Score=209.29 Aligned_cols=344 Identities=15% Similarity=0.167 Sum_probs=229.7
Q ss_pred CCeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC----CEEEecccH-H
Q 011567 107 SGKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP----DSILYSYGL-S 180 (483)
Q Consensus 107 ~G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e----~~i~~~sG~-~ 180 (483)
+|+.+|++..+ +.++ .+|.+++++.+.+.++.. .+|..++...+.+.+++.+|.+ +.|++++|+ +
T Consensus 695 ~g~~vI~LsinE~d~p--pPp~V~eAi~eal~~~~~-------s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~e 765 (1082)
T PLN02672 695 QESSLIHMDVDESFLP--VPSAVKASIFESFVRQNI-------SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLA 765 (1082)
T ss_pred CCCCEEEEeCCCCCCC--CCHHHHHHHHHHHhhcCC-------CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHH
Confidence 46789999998 5544 568999999988866432 3455677889999999988753 357777776 5
Q ss_pred HHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEEec
Q 011567 181 TMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVVEA 253 (483)
Q Consensus 181 a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~ 253 (483)
++..++.+++++||.|++..+++..+...++..|.+++.++.+ |.+.|++.++... +..++++.|
T Consensus 766 lL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~--------~~~I~L~nP 837 (1082)
T PLN02672 766 LFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVK--------KPWVYISGP 837 (1082)
T ss_pred HHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCC--------CCEEEEECc
Confidence 5557789999999999999999999999999999999887653 4566666653211 134566666
Q ss_pred ccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCc---cc---cccC-CCCCceeEEEccccccccCCC-
Q 011567 254 VYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRG---LT---EHCG-VPVDKIDIVTAAMGHALATEG- 322 (483)
Q Consensus 254 v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g---~~---~~~~-v~~~~~Di~~~s~~K~lg~~G- 322 (483)
.+|++|.+.+ +++|+++|++||+++|+||+|+...+...... +. ..+. ..+...-++++||||.++.+|
T Consensus 838 nhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGL 917 (1082)
T PLN02672 838 TINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGH 917 (1082)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHH
Confidence 5699999988 78899999999999999999986555321100 11 0111 001224578899999998777
Q ss_pred --ceeeccH-HHHHHHHhcCCceeecCCCcHHHHHHHHHHHH-----HHhcCcHHHHHHHHHHHHHHHhhccCCCceeec
Q 011567 323 --GFCTGSA-RVVDHQRLSSSGYVFSASLPPYLASAAITAID-----VLEENPDLITKLKKNTAILRTGLSDIHGLSIAS 394 (483)
Q Consensus 323 --G~i~~~~-~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~-----~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~ 394 (483)
||+++++ ++++.++... .+.-..+.+.++++++.+++. +.+...+.++.++++.+++.+.|++. |+.+..
T Consensus 918 RIGylIap~~eLi~~l~~~~-~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~~ 995 (1082)
T PLN02672 918 EFGFLALNDSVLIDAFHSAP-GLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWDVLE 995 (1082)
T ss_pred HheeEEeCCHHHHHHHHHhh-hhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEec
Confidence 9999864 4888776431 111011112333333333221 11111345667888999999999886 887765
Q ss_pred CCCCCEEEEEecCCC------CCchh---hHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHH
Q 011567 395 NPESPIVFLILEKST------GSMKN---DLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLV 465 (483)
Q Consensus 395 ~~~~~i~~l~l~~~~------~~~~~---~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~ 465 (483)
+..+.++++.+.... ...+. ......++++.++++.||.+.++.+... ++.+||++. .++++++
T Consensus 996 PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~-----~g~~RIsfa--~~~e~Le 1068 (1082)
T PLN02672 996 PQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGI-----PGYCRFSFA--LEDSEFD 1068 (1082)
T ss_pred CCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCC-----CCeEEEEec--CCHHHHH
Confidence 545656666542100 00000 0012346888888777999998754322 344999986 4889999
Q ss_pred HHHHHHHHHHH
Q 011567 466 KACESLKRISA 476 (483)
Q Consensus 466 ~~~~~l~~~~~ 476 (483)
++++.|+++..
T Consensus 1069 eALerL~kf~~ 1079 (1082)
T PLN02672 1069 RALKAIARFKE 1079 (1082)
T ss_pred HHHHHHHHHHH
Confidence 99999998654
No 221
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.90 E-value=4.4e-21 Score=192.51 Aligned_cols=324 Identities=15% Similarity=0.131 Sum_probs=213.8
Q ss_pred ECCeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEe-cccHHHH
Q 011567 106 ISGKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILY-SYGLSTM 182 (483)
Q Consensus 106 ~~G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~-~sG~~a~ 182 (483)
.++++++||+.+ |.+|. ++.+.+++.+.+.... .|... ...+|++.+|++++.+ +.+++ +++.+++
T Consensus 17 ~~~~~~i~l~~~~~~~~~--p~~~~~a~~~~~~~~~--------~y~~~-~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l 85 (356)
T PRK08056 17 ISPDQLLDFSANINPLGM--PVSLKRAIIDNLDCAE--------RYPDV-EYRHLHQALARHHQVPASWILAGNGETESI 85 (356)
T ss_pred CChhhEEEeccccCCCCC--CHHHHHHHHHHHHhcc--------cCcCc-cHHHHHHHHHHHhCcChhhEEECCCHHHHH
Confidence 456789999998 66664 4788899888776531 12222 2578999999999853 34555 5555777
Q ss_pred HhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC---CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCC
Q 011567 183 FSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN---DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSG 259 (483)
Q Consensus 183 ~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~---d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G 259 (483)
..+++++ .++++|+. .+.+..+...++..|.+++.++.. +.+.-++.++.... ++++|++..+++++|
T Consensus 86 ~~~~~~l-~~g~viv~-~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~-------~~k~v~l~~p~NPTG 156 (356)
T PRK08056 86 FAVVSGL-KPRRAMIV-TPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAILEALTP-------DLDCLFLCTPNNPTG 156 (356)
T ss_pred HHHHHHh-CCCCEEEe-CCCcHHHHHHHHHcCCeEEEEecccccCCCccHHHHHhccC-------CCCEEEEeCCcCCCC
Confidence 7777777 56776655 456666667778888888887642 11100122222222 356777788899999
Q ss_pred CccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeec-cHHHH
Q 011567 260 QIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTG-SARVV 332 (483)
Q Consensus 260 ~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~-~~~~~ 332 (483)
.+.+ +++|+++|++|++++|+||+|...... +........ ..+.+++++|+||++|..| ||+++ +++++
T Consensus 157 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~--~~~~~~~~~--~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~ 232 (356)
T PRK08056 157 LLPERQLLQAIAERCKSLNIALILDEAFIDFIPD--ETGFIPQLA--DNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAV 232 (356)
T ss_pred CCCCHHHHHHHHHHHHhcCCEEEEecchhccCCc--chHHHHHhc--cCCCEEEEEechhhccCcchhheeeecCCHHHH
Confidence 9999 888999999999999999999764432 222111111 1234788999999999766 99987 46777
Q ss_pred HHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCc
Q 011567 333 DHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSM 412 (483)
Q Consensus 333 ~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~ 412 (483)
+.++..... + +.+.+...++..+++.-....+.++.++++.+++.+.|++++++.+. ++.++++++.+..+
T Consensus 233 ~~l~~~~~~--~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~---- 303 (356)
T PRK08056 233 ARMRRQQMP--W--SINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVW-PGRANYLFLRCERP---- 303 (356)
T ss_pred HHHHHhCCC--C--chhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCCCcEEEEEcCCC----
Confidence 776543222 1 23455555555555311111345677888889999999887777765 34678887776421
Q ss_pred hhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 413 KNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 413 ~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
..++++.++ ++||.+.+...... ..++.+||++. ++++.++++++|++++
T Consensus 304 ------~~~~~~~l~-~~gI~v~~~~~f~~---~~~~~iRis~~---~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 304 ------DIDLQRALL-TQRILIRSCANYPG---LDSRYYRVAIR---SAAENERLLAALRNVL 353 (356)
T ss_pred ------hHHHHHHHH-HCCeEEEECCCCCC---CCCCEEEEEEc---CHHHHHHHHHHHHHHH
Confidence 125677655 46999987653211 11245999984 7899999999998764
No 222
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.90 E-value=7.6e-21 Score=180.94 Aligned_cols=326 Identities=18% Similarity=0.159 Sum_probs=232.3
Q ss_pred CCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC---CCEEEeccc-HHHHHhhhhhhccCCcEEE
Q 011567 122 LIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT---PDSILYSYG-LSTMFSAIPCFCKKGDLIV 197 (483)
Q Consensus 122 ~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~---e~~i~~~sG-~~a~~~ai~~~~~~gdiI~ 197 (483)
+...|.|.+|+.+.++..-.|. .+++.++...+....++..+. ++.++++.| --++..++++++++||-|+
T Consensus 37 f~~pp~i~~Al~~rvdhGvfGY-----~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vv 111 (388)
T COG1168 37 FPTPPEIIEALRERVDHGVFGY-----PYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGVV 111 (388)
T ss_pred CCCCHHHHHHHHHHHhcCCCCC-----CCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCcCCCeeE
Confidence 3367999999999998722222 234444566666666666553 467777555 5889999999999999999
Q ss_pred EcCCchhHHHhHhhhcCCeEEEecCC--------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC---hHH
Q 011567 198 ADEGVHWGIQNGLYLSRSTVVYFKHN--------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP---LDE 266 (483)
Q Consensus 198 ~~~~~h~s~~~g~~~s~~~v~~~~~~--------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~---L~~ 266 (483)
+..+++....+.+...+.+++..+-. |+++||+.+.+.. +++++...++|++|.++. |.+
T Consensus 112 i~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~---------vkl~iLCnPHNP~Grvwt~eeL~~ 182 (388)
T COG1168 112 IQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDER---------VKLFILCNPHNPTGRVWTKEELRK 182 (388)
T ss_pred ecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCC---------ccEEEEeCCCCCCCccccHHHHHH
Confidence 99999999999999999988876532 8999999887632 456666777889999987 999
Q ss_pred HHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCC--ceeEEEccccccccCCC---ce-eeccHHHHHHHHhcCC
Q 011567 267 LIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVD--KIDIVTAAMGHALATEG---GF-CTGSARVVDHQRLSSS 340 (483)
Q Consensus 267 l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~--~~Di~~~s~~K~lg~~G---G~-i~~~~~~~~~~~~~~~ 340 (483)
|.+||.|||+++|.||+|+-.+++.. + ......+++. +.-|.+.|-||+|+..| ++ ++.+++..++.-..-.
T Consensus 183 i~elc~kh~v~VISDEIHaDlv~~g~-~-h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~ 260 (388)
T COG1168 183 IAELCLRHGVRVISDEIHADLVLGGH-K-HIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLK 260 (388)
T ss_pred HHHHHHHcCCEEEeecccccccccCC-C-ccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHH
Confidence 99999999999999999998877532 2 1222233332 45677778899998665 44 5666666443211111
Q ss_pred ceeecCCCcHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHhhcc-CCCceeecCCCCCEEEEEecCCCCCchhhHHH
Q 011567 341 GYVFSASLPPYLASAAITAIDVLEEN-PDLITKLKKNTAILRTGLSD-IHGLSIASNPESPIVFLILEKSTGSMKNDLQL 418 (483)
Q Consensus 341 ~~~fs~~~~p~~~aaa~~al~~l~~~-~~~~~~l~~~~~~l~~~L~~-~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~ 418 (483)
.......|.+...|..++.+.-+.. +++.+.++.|..++.+.|.+ +|++.+..+.++.+.++.+..-.- ++
T Consensus 261 -~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~l----~d-- 333 (388)
T COG1168 261 -RNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELGL----DD-- 333 (388)
T ss_pred -HhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccCC----Ch--
Confidence 1122345778888887787654432 46899999999999999976 579999987788888988754321 11
Q ss_pred HHHHHHHHHHhCCEEEEeecccccccCCCCCc-eEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 419 LEDIADWALKEDGVFVVTSKRSMLDKCRLPVG-IRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 419 ~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~-lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
.++.+.++++.+|.+..+...... ..| +|+.+ ..+++-++++++.|+.+++.
T Consensus 334 -~~l~~~ll~~akVal~~G~~FG~~----g~gf~RlN~--acpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 334 -SELAEFLLEEAKVALSPGSTFGEE----GSGFVRLNF--ACPRAILEEALERLKRALKK 386 (388)
T ss_pred -HHHHHHHHHhhcEeccCCCccCcC----CCceEEEec--CCCHHHHHHHHHHHHHHHhc
Confidence 134556677788999877543310 012 77754 58999999999999987764
No 223
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.90 E-value=1.3e-21 Score=196.43 Aligned_cols=287 Identities=16% Similarity=0.161 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhH----hhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG----LYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g----~~~s~~~v~~~~~~d~~~Le 229 (483)
+.+..||++||++.|.+++++++||++|+..++.++.++||.|++.+..|.+...- +...|.++..++.++.++++
T Consensus 50 Pt~~~lE~~lA~l~g~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l~ 129 (377)
T TIGR01324 50 LTHFALQDAMCELEGGAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDIA 129 (377)
T ss_pred ccHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHH
Confidence 56789999999999999999999999999999999999999998776666554321 23456777777666556666
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+++ ++++|++|.+.+++|.+.|+++|+++|++||+++|+|++|+.|.+.+ .+ . .++|+
T Consensus 130 ~~i~~----------~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~---pl--~-----~gaDi 189 (377)
T TIGR01324 130 TLIQP----------NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFK---PL--E-----HGVDI 189 (377)
T ss_pred HhcCC----------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC---cc--c-----cCceE
Confidence 65532 37899999999999999999999999999999999999999876542 11 1 34599
Q ss_pred EEccccccccC----CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhc
Q 011567 310 VTAAMGHALAT----EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLS 385 (483)
Q Consensus 310 ~~~s~~K~lg~----~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~ 385 (483)
+++|++|.+++ .||+++++++..+.++.. .+.++..++|..+...+..++.+ +.++++.++++..+.+.|+
T Consensus 190 vv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~--~~~~G~~l~p~~a~~~~rgl~tl---~~R~~~~~~~a~~la~~L~ 264 (377)
T TIGR01324 190 SIQAGTKYLVGHSDIMIGTVVANARTWDQLREH--SYLMGQMVDADDAYTTLRGLRTL---GVRLKQHQESSLAIAKWLS 264 (377)
T ss_pred EEecCceeccCCCCceEEEEEeCHHHHHHHHHH--HHHhCCCCCHHHHHHHHhhhhhH---HHHHHHHHHHHHHHHHHHH
Confidence 99999999973 368888888877766532 44667778898888777777655 3467888888888888888
Q ss_pred cCCCce-eec----------------CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc------
Q 011567 386 DIHGLS-IAS----------------NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML------ 442 (483)
Q Consensus 386 ~~~~~~-i~~----------------~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~------ 442 (483)
+.+.+. +.. ...+.++.+.++.. ......++.+. |+-.++.++-+...++
T Consensus 265 ~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~------~~~~~~~~~~~-l~~~~~~~slG~~~sl~~~~~~ 337 (377)
T TIGR01324 265 EQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRL------TQKQVHAFLDH-LQLFGLGYSWGGYESLALCNQP 337 (377)
T ss_pred hCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCC------CHHHHHHHHHh-CCcceEeccCCCccceeecCCC
Confidence 765431 111 12356888888521 12223455553 4332333322222111
Q ss_pred --c-----c-CCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 443 --D-----K-CRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 443 --~-----~-~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
. . ...++-||+++.. ||.|.+++-|+++++
T Consensus 338 ~~~~~~~~~~~~~~~liR~svGl----E~~~dl~~dl~~al~ 375 (377)
T TIGR01324 338 ELGHRPNIKRNLEGPLIRVHIGL----ENVDDLKADLKAGFE 375 (377)
T ss_pred CCCHHHHHhccCCCCEEEEEeCC----CCHHHHHHHHHHHHh
Confidence 0 0 0111239999976 455566666666654
No 224
>PLN02242 methionine gamma-lyase
Probab=99.90 E-value=1.8e-21 Score=197.75 Aligned_cols=217 Identities=16% Similarity=0.231 Sum_probs=167.8
Q ss_pred hHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHh-----hhcCCeEEEecCCCHHH
Q 011567 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL-----YLSRSTVVYFKHNDMDS 227 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~-----~~s~~~v~~~~~~d~~~ 227 (483)
.+...+||+.+|+++|.+.++++++|++|+..++.++.++||.|+++.+.|..+...+ +..|.++..++..|+++
T Consensus 75 ~Pt~~~LE~~lA~l~g~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~ 154 (418)
T PLN02242 75 NPTVLNLGRQMAALEGTEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEA 154 (418)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHH
Confidence 4678999999999999999999999999999999999999999999998877665443 34577777777778888
Q ss_pred HHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCce
Q 011567 228 LRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKI 307 (483)
Q Consensus 228 Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~ 307 (483)
+++.++.. ++++|+++.++|++|.+.++++|+++|++||+++|+||+|+.+.+.. . .+ ..
T Consensus 155 l~~~i~~~---------~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~~-----~-~~-----g~ 214 (418)
T PLN02242 155 VKKAVVPG---------KTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLSP-----A-RL-----GA 214 (418)
T ss_pred HHHhcCcC---------CCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCCH-----H-Hc-----CC
Confidence 87776431 26899999999999999999999999999999999999997544321 1 11 24
Q ss_pred eEEEccccccccCC----CceeeccHHHHHHHHhcCCc--eeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Q 011567 308 DIVTAAMGHALATE----GGFCTGSARVVDHQRLSSSG--YVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILR 381 (483)
Q Consensus 308 Di~~~s~~K~lg~~----GG~i~~~~~~~~~~~~~~~~--~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~ 381 (483)
|++++|++|++++. ||++++++++++.++....+ ..++..+.|..++.....++. .+..+++..+++.++.
T Consensus 215 divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l~t---l~~r~~~~~~~a~~la 291 (418)
T PLN02242 215 DVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERLPH---LSLRMKEHCRRAMEYA 291 (418)
T ss_pred cEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCCCc---HHHHHHHHHHHHHHHH
Confidence 89999999999743 69999999988887654332 223334556665555443332 2346778889999999
Q ss_pred HhhccCCCceee
Q 011567 382 TGLSDIHGLSIA 393 (483)
Q Consensus 382 ~~L~~~~~~~i~ 393 (483)
+.|++. ++++.
T Consensus 292 ~~L~~~-~~~V~ 302 (418)
T PLN02242 292 KRMKEL-GLKVI 302 (418)
T ss_pred HHHHhC-CCEEE
Confidence 999887 55554
No 225
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=7.7e-21 Score=190.88 Aligned_cols=317 Identities=18% Similarity=0.182 Sum_probs=210.1
Q ss_pred CCeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEe-cccHHHHH
Q 011567 107 SGKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILY-SYGLSTMF 183 (483)
Q Consensus 107 ~G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~-~sG~~a~~ 183 (483)
+|.+++||..+ +.++. .|.+.+++.+.++.. . .|+. ....+|++.+|++++.+ +.++. +++.+++.
T Consensus 28 ~~~~~i~l~~~~~~~~~--~~~~~~~~~~~~~~~-~-------~Y~~-~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~ 96 (357)
T PRK14809 28 DPDDLVKLSSNENPHGP--SPAAVEAIREAAERV-H-------SYPK-ASHADLTAALADRWDVSPEQVWLANGGDGALD 96 (357)
T ss_pred CccceeEecCCCCCCCC--CHHHHHHHHHHHhhh-h-------cCCC-CCHHHHHHHHHHHhCCCcceEEECCCHHHHHH
Confidence 46689999998 66554 578888888776541 1 1211 12468999999999843 44555 55568888
Q ss_pred hhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC---CHH-HHHHHHHHhhhhhhhccCccEEEEEecccCCCC
Q 011567 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN---DMD-SLRNTLERVTADNKRAKKLRRYIVVEAVYQNSG 259 (483)
Q Consensus 184 ~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~---d~~-~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G 259 (483)
.++++++++||.|+++.+++..........|..++.++.. +.+ +++++.+... .+++|++.+++|++|
T Consensus 97 ~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~--------~~k~i~l~~p~NPTG 168 (357)
T PRK14809 97 YLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD--------GERIVYLTSPHNPTG 168 (357)
T ss_pred HHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc--------CCcEEEEeCCCCCCC
Confidence 8999999999999999998876666667777777666532 111 1233222211 145666668889999
Q ss_pred CccChHHHHHHHHHc--CcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHH
Q 011567 260 QIAPLDELIRLKEKY--RFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDH 334 (483)
Q Consensus 260 ~i~~L~~l~~l~~k~--~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~ 334 (483)
.+.+.+++.++++.+ ++++|+||+|+..... +... .. +...+..++++||||.+|.+| ||+++++++++.
T Consensus 169 ~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~--~~~~-~~--~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~ 243 (357)
T PRK14809 169 SEIPLDEVEALAERTDEETLVVVDEAYGEFAER--PSAV-AL--VEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADA 243 (357)
T ss_pred cCCCHHHHHHHHHhCccCcEEEEechhhhccCC--chhH-HH--HhhCCCEEEEecchhHhcCcchhheeeecCHHHHHH
Confidence 999977777777654 7899999999865432 2111 11 112233578899999999777 999999999888
Q ss_pred HHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchh
Q 011567 335 QRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKN 414 (483)
Q Consensus 335 ~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~ 414 (483)
+...... + +.++....++.++++.-....+.++.++++.+.+.+.|... .+ ++.+.++++.+.+
T Consensus 244 ~~~~~~~--~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~----~~~g~f~~~~~~~------- 307 (357)
T PRK14809 244 YARVNTP--F--AASELACRAGLAALDDDEHVERTVETARWAREYIREELDAP-TW----ESAGNFVLAEVGD------- 307 (357)
T ss_pred HHHhCCC--C--CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc-cC----CCCCCEEEEECCC-------
Confidence 7654322 2 24566666666666421111234556666677777777542 22 3467788877631
Q ss_pred hHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 415 DLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 415 ~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
..++++.+ +++||.+.++..... ++.+|+++. +++++++++++|+++++
T Consensus 308 ----~~~~~~~l-~~~gv~v~~g~~f~~-----~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 308 ----ASAVAEAA-QERGVIVRDCTSFGL-----PECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred ----HHHHHHHH-HHCCEEEEECccCCC-----CCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 22566654 556999998754432 345999874 57999999999988764
No 226
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.90 E-value=1.4e-20 Score=189.96 Aligned_cols=294 Identities=16% Similarity=0.217 Sum_probs=203.0
Q ss_pred HHHHHHHHHHHhhhCCC---CEE-EecccHHHHHhhhhhhccCCcEEEE-cCCchhHH-HhHhhhcCCeEEEecC-----
Q 011567 154 DVHLDCEARIAKFLGTP---DSI-LYSYGLSTMFSAIPCFCKKGDLIVA-DEGVHWGI-QNGLYLSRSTVVYFKH----- 222 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e---~~i-~~~sG~~a~~~ai~~~~~~gdiI~~-~~~~h~s~-~~g~~~s~~~v~~~~~----- 222 (483)
+...++++.+++++|.+ +.+ ++++|++++..++.++..++|.|++ +..+++.. ...++..|.++..++.
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~ 116 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGEDEP 116 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCCCCC
Confidence 57899999999999974 334 5589999999999998888775554 44444332 3556667777776654
Q ss_pred CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCC
Q 011567 223 NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGV 302 (483)
Q Consensus 223 ~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v 302 (483)
.|++++++.+++.. ..++|.+..+.+++|.+.|+++|.++|+++|+++|+|+++++|... .++
T Consensus 117 ~d~~~l~~~l~~~~--------~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~---------~~~ 179 (368)
T PRK13479 117 PDAAEVEAALAADP--------RITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIP---------IDI 179 (368)
T ss_pred CCHHHHHHHHHhCC--------CCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCcc---------ccc
Confidence 26778877765421 2456777777788999999999999999999999999988775321 223
Q ss_pred CCCceeEEEccccccc-cCCC-ceeeccHHHHHHHHhcCCceeec---------------CCCcHHHHHHHHHHHHHHhc
Q 011567 303 PVDKIDIVTAAMGHAL-ATEG-GFCTGSARVVDHQRLSSSGYVFS---------------ASLPPYLASAAITAIDVLEE 365 (483)
Q Consensus 303 ~~~~~Di~~~s~~K~l-g~~G-G~i~~~~~~~~~~~~~~~~~~fs---------------~~~~p~~~aaa~~al~~l~~ 365 (483)
...++|++++|++|++ |+.| ||++.++++++.+.....++.++ .+.+....++..++++.+.+
T Consensus 180 ~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~ 259 (368)
T PRK13479 180 AELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEE 259 (368)
T ss_pred cccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 2234689999999987 5666 99999998887765433222110 12344555566677776643
Q ss_pred C---cHHHHHHHHHHHHHHHhhccCCCceeecCC--CCCE-EEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecc
Q 011567 366 N---PDLITKLKKNTAILRTGLSDIHGLSIASNP--ESPI-VFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKR 439 (483)
Q Consensus 366 ~---~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~--~~~i-~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~ 439 (483)
. ++..+++.++.+++++.|.++ |+.+..++ .+|. ..+.+...... + ..++.+.+. ++||.+.+...
T Consensus 260 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~l~~~L~-~~gi~v~~g~~ 331 (368)
T PRK13479 260 EGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFHAPADPAY---D---FKEFYERLK-EQGFVIYPGKL 331 (368)
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEECCCCCCc---C---HHHHHHHHH-HCCEEEecCCC
Confidence 2 466788899999999999887 77764331 3443 44544321100 1 235666544 46999976532
Q ss_pred cccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 440 SMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 440 ~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
.. ...+|++....+|++|+++++++|+++++++
T Consensus 332 ~~------~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 332 TQ------VDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred CC------CCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 11 2459998877789999999999999988754
No 227
>PRK09105 putative aminotransferase; Provisional
Probab=99.90 E-value=7.8e-21 Score=191.36 Aligned_cols=316 Identities=14% Similarity=0.125 Sum_probs=212.5
Q ss_pred eeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC--CEEEecccHHHHHhh
Q 011567 109 KEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSA 185 (483)
Q Consensus 109 ~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e--~~i~~~sG~~a~~~a 185 (483)
+.++++..+ +.++ .+|.+.+++.+.+...+ .|+... ..+|++.+++++|.+ +.++.+++++++..+
T Consensus 43 ~~~i~l~~~~~~~~--~~~~~~~a~~~~~~~~~--------~Y~~~~-~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~ 111 (370)
T PRK09105 43 EGAVFLNANECPLG--PSPAARDAAARSAALSG--------RYDLEL-EDDLRTLFAAQEGLPADHVMAYAGSSEPLNYA 111 (370)
T ss_pred CCcEEecCCCCCCC--CCHHHHHHHHHHHHHhc--------CCCCch-HHHHHHHHHHHhCcChhhEEEcCChHHHHHHH
Confidence 456777776 4444 56899999888776422 233333 678999999999853 444556667899999
Q ss_pred hhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCC--HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC
Q 011567 186 IPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHND--MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP 263 (483)
Q Consensus 186 i~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d--~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~ 263 (483)
+.+++++||.|++++++|..+...++..|.+++.++..+ .-+++++.+. .. +++++++..++|++|.+.+
T Consensus 112 ~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~~-------~~~~v~l~nP~NPTG~~~~ 183 (370)
T PRK09105 112 VLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAA-DP-------NAGLIYICNPNNPTGTVTP 183 (370)
T ss_pred HHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhc-CC-------CCCEEEEeCCCCCCCcCcC
Confidence 999999999999999999999888898999988876431 1123333222 11 2456666667899999999
Q ss_pred hHHHHHHHHH--cCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHHHhc
Q 011567 264 LDELIRLKEK--YRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLS 338 (483)
Q Consensus 264 L~~l~~l~~k--~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~~~ 338 (483)
.+++.++++. +++++|+||+|... +. +.......+. .+..+++.||||++|..| ||+++++++++.++..
T Consensus 184 ~~~l~~l~~~~~~~~~lIvDEaY~~f--~~-~~s~~~~~~~--~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~ 258 (370)
T PRK09105 184 RADIEWLLANKPAGSVLLVDEAYIHF--SD-APSVVDLVAQ--RKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF 258 (370)
T ss_pred HHHHHHHHHhCCCCcEEEEECchHHh--cc-CcchHHHHhh--CCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc
Confidence 8777777654 48999999999542 21 1111111111 222477899999999888 9999999999887654
Q ss_pred CCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHH
Q 011567 339 SSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQL 418 (483)
Q Consensus 339 ~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~ 418 (483)
.. .+.+.....++.++++......+.++.++++.+.+.+.|++. |+.+.. +.+.++.+.++. +
T Consensus 259 -~~----~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~-~~~~f~~~~~~~-------~--- 321 (370)
T PRK09105 259 -GH----NPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK-GYKCTP-SQANCFMVDVKR-------P--- 321 (370)
T ss_pred -CC----CCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcCC-CCCcEEEEeCCC-------C---
Confidence 11 123445555555666432212345677888888999999886 777654 456666555521 1
Q ss_pred HHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 419 LEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 419 ~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
..++++.+++ +||.+... ++. .++.+|+++. +++++++++++|++++
T Consensus 322 ~~~l~~~L~~-~gI~v~~~-~~~-----~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 322 AKAVADAMAK-QGVFIGRS-WPI-----WPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred HHHHHHHHHH-CCcEEecC-CCC-----CCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 2357776665 49998422 211 1345999985 6899999999998765
No 228
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.90 E-value=1.6e-20 Score=188.83 Aligned_cols=323 Identities=15% Similarity=0.117 Sum_probs=215.3
Q ss_pred eeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEe-cccHHHHHhh
Q 011567 109 KEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILY-SYGLSTMFSA 185 (483)
Q Consensus 109 ~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~-~sG~~a~~~a 185 (483)
.+++||..+ |.++ .++.+.+++.+.+... . .|+... ..+|++.||++++.+ +.|+. +++.+++..+
T Consensus 22 ~~~i~l~~~~n~~~--~~~~~~~a~~~~~~~~-~-------~Y~~~~-~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~ 90 (360)
T PRK07392 22 DAILDFSASINPLG--PPESVIAAIQSALSAL-R-------HYPDPD-YRELRLALAQHHQLPPEWILPGNGAAELLTWA 90 (360)
T ss_pred ccEEEeCCcCCCCC--CCHHHHHHHHHHHHHh-h-------cCCCcC-HHHHHHHHHHHhCcChhhEEECCCHHHHHHHH
Confidence 368999987 6655 4588888888777642 1 122222 358999999999753 33444 5556788888
Q ss_pred hhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCC-------HHHHHHHHHHhhhhhhhccCccEEEEEecccCCC
Q 011567 186 IPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHND-------MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNS 258 (483)
Q Consensus 186 i~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d-------~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~ 258 (483)
++++. ++|.|+++.+++..+...++..|.+++.++..+ ..+++++.+... .++++++...+|++
T Consensus 91 ~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~nP~NPT 161 (360)
T PRK07392 91 GRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQLT--------PNDGLLLNNPHNPT 161 (360)
T ss_pred HHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhcc--------CCCEEEEeCCCCCC
Confidence 88875 678888999999999999999999988876531 234554443221 24566666779999
Q ss_pred CCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHH
Q 011567 259 GQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQ 335 (483)
Q Consensus 259 G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~ 335 (483)
|.+.+.++|.++++++++ +|+||+|...........+.... +..+.-++++||||++|..| ||+++++++++.+
T Consensus 162 G~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~--~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~ 238 (360)
T PRK07392 162 GKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCL--AEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRW 238 (360)
T ss_pred CCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHh--hcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHH
Confidence 999999999999999986 66699998654322111111111 12233588899999998666 9999999988887
Q ss_pred HhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 011567 336 RLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 415 (483)
Q Consensus 336 ~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~ 415 (483)
...... + +.+.+...++.++++.-.-.....+.++++.+.+.+.|+.++++.+.. +.++++++.+..
T Consensus 239 ~~~~~~--~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~fl~~~~~~-------- 305 (360)
T PRK07392 239 QQWRDP--W--PVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPLP-SAANFLLVQSQG-------- 305 (360)
T ss_pred HhhCCC--C--CCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCCEEEEEcCC--------
Confidence 644322 2 345666666666664321112345667788888999998877877654 567777776632
Q ss_pred HHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 416 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 416 ~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
...+++..++++.||.+.++..... . .+..+||++. +.++.+++.+++++++
T Consensus 306 --~~~~l~~~ll~~~gv~v~pg~~f~~--~-~~~~iRi~~~---~~~~~~~l~~al~~~~ 357 (360)
T PRK07392 306 --SALQLQEKLLQQHRILIRDCLSFPE--L-GDRYFRVAVR---TEAENQRLLEALAAIL 357 (360)
T ss_pred --CHHHHHHHHHhhCCEEEEeCCCCCC--C-CCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 1235676667777999998754321 0 1245999985 3555666666666544
No 229
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.90 E-value=5.1e-21 Score=191.31 Aligned_cols=280 Identities=19% Similarity=0.225 Sum_probs=193.5
Q ss_pred ChHHHHHHHHHHHhhhCCC----CEEEecccHHHHHhhhhhhcc--------------CCcEEEEcCCchhHHHhHhhhc
Q 011567 152 TIDVHLDCEARIAKFLGTP----DSILYSYGLSTMFSAIPCFCK--------------KGDLIVADEGVHWGIQNGLYLS 213 (483)
Q Consensus 152 ~~~~~~~l~~~La~~~g~e----~~i~~~sG~~a~~~ai~~~~~--------------~gdiI~~~~~~h~s~~~g~~~s 213 (483)
..++..++.+.+++++|.+ +.+++++|++++..++.++.. .+++|+++...|.++..++...
T Consensus 36 ~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~ 115 (345)
T cd06450 36 ATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYL 115 (345)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHH
Confidence 3456666777778888864 677889999999988877642 2458999999999998888887
Q ss_pred CCeEEEecC-----CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCcccccc
Q 011567 214 RSTVVYFKH-----NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGV 288 (483)
Q Consensus 214 ~~~v~~~~~-----~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~ 288 (483)
|.+++.++. .|+++|++.+.+...+ ..++++|++....+++|.+.|+++|.++|++||+++++|++|+.+.
T Consensus 116 g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~----~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~ 191 (345)
T cd06450 116 DVKVRLVPVDEDGRMDPEALEAAIDEDKAE----GLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFL 191 (345)
T ss_pred hcCeEEeeeCCCCCcCHHHHHHHHHHHHHC----CCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHH
Confidence 888877763 3788888888653221 1124566666667778999999999999999999999999999876
Q ss_pred ccCC-CCccccccCCCCCceeEEEccccccccCC-C-ceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc
Q 011567 289 LGRS-GRGLTEHCGVPVDKIDIVTAAMGHALATE-G-GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE 365 (483)
Q Consensus 289 lg~~-G~g~~~~~~v~~~~~Di~~~s~~K~lg~~-G-G~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~ 365 (483)
+... ..+. ..++ .++|.++.|++|+++++ | |++..+ +.+..++++.+..
T Consensus 192 ~~~~~~~~~--~~~~--~~~d~~~~s~~K~l~~p~g~g~~~~~------------------------~~~~~~~l~~l~~ 243 (345)
T cd06450 192 LPFPEPRHL--DFGI--ERVDSISVDPHKYGLVPLGCSAVLVR------------------------ALKLWATLRRFGR 243 (345)
T ss_pred hhChhhHHH--hcCc--cccCEEEEchhHhhCCCcchHHHHHH------------------------HHHHHHHHHHHhH
Confidence 5321 1111 1111 35688888999988632 2 554433 2223334444432
Q ss_pred --CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccc
Q 011567 366 --NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLD 443 (483)
Q Consensus 366 --~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~ 443 (483)
.++.+++..++.+++.+.|++++++.+..++.++++.+.+.... .......++.+.+.+++++++....+.
T Consensus 244 ~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~----~~~~~~~~i~~~L~~~g~~~~~~~~~~--- 316 (345)
T cd06450 244 DGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSV----KLDELNYDLSDRLNERGGWHVPATTLG--- 316 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcc----hhhHHHHHHHHHHHhcCCEEEEeeEEC---
Confidence 24678888899999999999988888776667888888875311 001223467776544434445432221
Q ss_pred cCCCCCceEEEccCCC-CHHHHHHHHHHHHH
Q 011567 444 KCRLPVGIRLFVSAAH-SEADLVKACESLKR 473 (483)
Q Consensus 444 ~~~~~~~lRi~~~~~~-t~edi~~~~~~l~~ 473 (483)
.+..+|++++..+ |++|+++++++|++
T Consensus 317 ---~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 317 ---GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred ---CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 1234999999875 99999999999975
No 230
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=1.5e-20 Score=189.66 Aligned_cols=321 Identities=18% Similarity=0.170 Sum_probs=213.9
Q ss_pred CeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEeccc-HHHHHh
Q 011567 108 GKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILYSYG-LSTMFS 184 (483)
Q Consensus 108 G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~~sG-~~a~~~ 184 (483)
+.+++||..+ |.++ ..+.+.+++.+..... . .|+.... .+|++.+|+++|.+ +.+++++| ++++..
T Consensus 35 ~~~~i~l~~~~~~~~--~~~~~~~al~~~~~~~-~-------~Y~~~~g-~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~ 103 (371)
T PRK05166 35 VPRIAKLGSNENPLG--PSPAVRRAFADIAELL-R-------LYPDPQG-RALREAIAARTGVPADRIILGNGSEDLIAV 103 (371)
T ss_pred CcceEEcCCCCCCCC--CCHHHHHHHHHHHHHh-h-------cCCCCcH-HHHHHHHHHHhCcCHHHEEEcCCHHHHHHH
Confidence 4578999998 5554 4578888887654331 1 1222222 37999999999854 44555554 578888
Q ss_pred hhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCC
Q 011567 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSG 259 (483)
Q Consensus 185 ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G 259 (483)
++.++.++||.|++..+.|......++..|.+++.++.+ |++++++.+++ .+++|++...++++|
T Consensus 104 ~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~----------~~~~v~l~~p~NPtG 173 (371)
T PRK05166 104 ICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVAR----------APRMLMFSNPSNPVG 173 (371)
T ss_pred HHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhc----------CCCEEEEeCCCCCCC
Confidence 889999999999999999988888888889888877653 56777666543 145677778889999
Q ss_pred CccChHHHHHHHHH--cCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceee-ccHHHHH
Q 011567 260 QIAPLDELIRLKEK--YRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCT-GSARVVD 333 (483)
Q Consensus 260 ~i~~L~~l~~l~~k--~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~-~~~~~~~ 333 (483)
.+.|.+++.++++. .++++|+||+|.....+........... ...+..|+++||||++|..| ||++ +++++++
T Consensus 174 ~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~ 252 (371)
T PRK05166 174 SWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLK-ARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVG 252 (371)
T ss_pred CCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHh-hcCCCEEEEeechHhhhcchhheeeeecCCHHHHH
Confidence 99997666666553 4789999999987654321111111111 11123588999999998777 9965 5788888
Q ss_pred HHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCch
Q 011567 334 HQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMK 413 (483)
Q Consensus 334 ~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~ 413 (483)
.++..... ++ .+.+...++.+++..-...++.++.++++.+.+.+.|++. |+.+. ++.++++++.+..
T Consensus 253 ~~~~~~~~--~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-p~~g~fl~~~~~~------ 320 (371)
T PRK05166 253 LLDRVRTP--FN--VNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM-GYRIA-PSRANFLFFDARR------ 320 (371)
T ss_pred HHHHhccC--CC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-cCeeC-CCcCCEEEEeCCC------
Confidence 77543322 22 3555555555555321112345667777888899999886 77654 4467777776521
Q ss_pred hhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 414 NDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 414 ~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
+ ..++++.+++ +||.+.+...+. .++.+||++. +.++.+++.++|++++
T Consensus 321 -~---~~~l~~~l~~-~gi~v~p~~~~~-----~~~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 321 -P---ASAVAEALLR-QGVIVKPWKQPG-----FETFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred -C---HHHHHHHHHH-CCeEEecCCCCC-----CCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 1 2356776665 599998764322 1345999996 6778888888887654
No 231
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.89 E-value=4.9e-21 Score=198.80 Aligned_cols=307 Identities=12% Similarity=0.175 Sum_probs=197.2
Q ss_pred HHHHHHHHhhhC--------C-CCEE-EecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhh-hcCCeEEEecCC--
Q 011567 157 LDCEARIAKFLG--------T-PDSI-LYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY-LSRSTVVYFKHN-- 223 (483)
Q Consensus 157 ~~l~~~La~~~g--------~-e~~i-~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~-~s~~~v~~~~~~-- 223 (483)
.+|++.||++++ . ++.| +.+++++++..++.+++++||.|+++.++|......+. ..|.+++.++..
T Consensus 97 ~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~ 176 (496)
T PLN02376 97 KKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSS 176 (496)
T ss_pred HHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCC
Confidence 456666666553 1 2344 44566688999999999999999999999998887776 478888887652
Q ss_pred -----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCC-C
Q 011567 224 -----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSG-R 294 (483)
Q Consensus 224 -----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G-~ 294 (483)
|++.++..++..... ..++++|++..++|++|.+.+ +++|+++|++|++++|+||+|+..++.... .
T Consensus 177 ~~~~~~~~~le~a~~~a~~~----~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~ 252 (496)
T PLN02376 177 DNFKLTVDAADWAYKKAQES----NKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFV 252 (496)
T ss_pred ccCcCCHHHHHHHHHHHHhc----CCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcc
Confidence 466776655432210 113566666677889999999 788999999999999999999876553211 1
Q ss_pred cccccc-CCCCC----ceeEEEccccccccCCC---ceeec-cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHH---
Q 011567 295 GLTEHC-GVPVD----KIDIVTAAMGHALATEG---GFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDV--- 362 (483)
Q Consensus 295 g~~~~~-~v~~~----~~Di~~~s~~K~lg~~G---G~i~~-~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~--- 362 (483)
.+.+.. ..+.. +.-+++.||||.||.+| ||+++ ++.+.+..+... . |+ ..+.....++.+.++.
T Consensus 253 si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~-~--~~-~vs~~~Q~a~~~~L~d~~~ 328 (496)
T PLN02376 253 SVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMS-S--FG-LVSSQTQLMLASMLSDDQF 328 (496)
T ss_pred cHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHh-h--cC-CCCHHHHHHHHHHhCChhH
Confidence 111111 00101 12355789999998766 99988 456666544332 1 22 1234444444334321
Q ss_pred Hhc-CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccc
Q 011567 363 LEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSM 441 (483)
Q Consensus 363 l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~ 441 (483)
+++ ..+.+++++++.+.+.+.|++. |+.+..+..+.++++.++...... .......++++.++++.||.+.++....
T Consensus 329 ~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~~~aG~flwi~l~~~~~~~-~~~~~e~~l~~~ll~~~gV~v~pGs~F~ 406 (496)
T PLN02376 329 VDNFLMESSRRLGIRHKVFTTGIKKA-DIACLTSNAGLFAWMDLRHLLRDR-NSFESEIELWHIIIDKVKLNVSPGSSFR 406 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCceEEEEEEchhhhccC-CchhHHHHHHHHHHHcCCEEEeCccccC
Confidence 111 1234666777888888888875 777665556678888875321100 0111224577777777799999875432
Q ss_pred cccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 442 LDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 442 ~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
. ..++.+||++.. .++++++.+++.|++++.+
T Consensus 407 ~---~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~~ 438 (496)
T PLN02376 407 C---TEPGWFRICFAN-MDDDTLHVALGRIQDFVSK 438 (496)
T ss_pred C---CCCCEEEEEeeC-CCHHHHHHHHHHHHHHHHH
Confidence 1 123569999864 5689999999999998864
No 232
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.89 E-value=7.8e-21 Score=188.63 Aligned_cols=304 Identities=16% Similarity=0.155 Sum_probs=202.0
Q ss_pred eeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEecccH-HHHHhh
Q 011567 109 KEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILYSYGL-STMFSA 185 (483)
Q Consensus 109 ~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~~sG~-~a~~~a 185 (483)
++.++|+.+ |.+++ | ..+...+.+..|+ ... ..++++.+++++|.+ +.+++++|+ +++..+
T Consensus 17 ~~~~~~~~~~~~~~~---~-~~~~~~~~~~~y~-----------~~~-~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~ 80 (330)
T TIGR01140 17 EDWLDFSTGINPLGP---P-VPPIPASAWARYP-----------DPE-YDELRAAAAAYYGLPAASVLPVNGAQEAIYLL 80 (330)
T ss_pred hheeEccccCCCCCC---C-hhhcchHHHhhCC-----------Ccc-HHHHHHHHHHHhCCChhhEEECCCHHHHHHHH
Confidence 467999988 56555 2 2233233333332 223 488999999999964 667776666 455555
Q ss_pred hhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC--
Q 011567 186 IPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP-- 263 (483)
Q Consensus 186 i~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~-- 263 (483)
..+ .++|+ |++..++|..+...+...|.+++.++ |++++++.+++ +++|++..+.+++|.+.+
T Consensus 81 ~~~-l~~g~-vl~~~p~y~~~~~~~~~~g~~~~~~~--d~~~l~~~~~~-----------~~~v~i~~p~NPtG~~~~~~ 145 (330)
T TIGR01140 81 PRL-LAPGR-VLVLAPTYSEYARAWRAAGHEVVELP--DLDRLPAALEE-----------LDVLVLCNPNNPTGRLIPPE 145 (330)
T ss_pred HHH-hCCCe-EEEeCCCcHHHHHHHHHcCCEEEEeC--CHHHHHhhccc-----------CCEEEEeCCCCCCCCCCCHH
Confidence 444 45675 56667778788888888898988887 88888776532 335555666889999999
Q ss_pred -hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHHHhcC
Q 011567 264 -LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSS 339 (483)
Q Consensus 264 -L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~~~~ 339 (483)
+++|+++|++||+++|+||+|+.+... ..+....+ ..+.+|+++|+||++|..| ||+++++++++.+....
T Consensus 146 ~~~~l~~~a~~~~~~ii~De~y~~~~~~---~~~~~~~~--~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~ 220 (330)
T TIGR01140 146 TLLALAARLRARGGWLVVDEAFIDFTPD---ASLAPQAA--RFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREAL 220 (330)
T ss_pred HHHHHHHHhHhcCCEEEEECcccccCCc---cchhhHhc--cCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhcC
Confidence 777889999999999999999765432 12222111 1244799999999999777 99999999988876544
Q ss_pred CceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHH
Q 011567 340 SGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLL 419 (483)
Q Consensus 340 ~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~ 419 (483)
..+ +.++...+++.+.++.-....+.+++++++.+.+.+.|++++.+.+. ++.+.++++.+++ .
T Consensus 221 ~~~----~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~~-----------~ 284 (330)
T TIGR01140 221 GPW----TVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLEVV-GGTALFLLVRTPD-----------A 284 (330)
T ss_pred CCC----CchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcCC-----------H
Confidence 332 23455555555555422111346788889999999999887545554 3356677766531 2
Q ss_pred HHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHH
Q 011567 420 EDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESL 471 (483)
Q Consensus 420 ~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l 471 (483)
.++++.+++ +||.+.++..+.. ..++.+|++++.. .++ ++++++|
T Consensus 285 ~~l~~~l~~-~gi~v~pg~~f~~---~~~~~iRi~~~~~--~~~-~~~~~~l 329 (330)
T TIGR01140 285 AALHEALAR-RGILIRDFDNFPG---LDPRYLRFALPTD--EEN-DRLEEAL 329 (330)
T ss_pred HHHHHHHHH-CCEEEEECCCCCC---CCCCEEEEEecCH--HHH-HHHHHhh
Confidence 367777665 6999998765420 0124599998642 244 7777665
No 233
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.89 E-value=4e-21 Score=194.25 Aligned_cols=213 Identities=15% Similarity=0.171 Sum_probs=165.2
Q ss_pred hHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHh----HhhhcCCeEEEecCCCHHHH
Q 011567 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSL 228 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~----g~~~s~~~v~~~~~~d~~~L 228 (483)
.+...++|+++++++|.++++++++|++|+..++.++.++||.|+++...|.++.. .+...|.+++.++.+|++++
T Consensus 60 ~p~~~~le~~la~l~g~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l 139 (390)
T PRK08133 60 NPTVTMFQERLAALEGAEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAW 139 (390)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHH
Confidence 35688999999999999999999999999999999999999999999888876553 34456888989988888888
Q ss_pred HHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCcee
Q 011567 229 RNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKID 308 (483)
Q Consensus 229 e~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~D 308 (483)
++.++. ++++|++|.+.+++|.+.|+++|+++|++||+++|+|++++.+.... .+ . ..+|
T Consensus 140 ~~~i~~----------~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~---pl----~---~g~D 199 (390)
T PRK08133 140 RAAVRP----------NTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQ---PL----K---LGAD 199 (390)
T ss_pred HHhcCc----------CCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCC---ch----h---hCCc
Confidence 877643 37899999999999999999999999999999999999987554321 11 1 2348
Q ss_pred EEEccccccccC----CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 309 IVTAAMGHALAT----EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 309 i~~~s~~K~lg~----~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
++++|++|.+++ .||+++++++.++.+..... ..+..++|..+..++..++.+ ..+.++..++...+.+.|
T Consensus 200 ivv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~--~~g~~~~~~~a~~~l~gl~tl---~~R~~~~~~~a~~la~~L 274 (390)
T PRK08133 200 VVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLR--TAGPTLSPFNAWVFLKGLETL---SLRMEAHSANALALAEWL 274 (390)
T ss_pred EEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHH--HhCCCCCHHHHHHHHcccchH---HHHHHHHHHHHHHHHHHH
Confidence 999999999975 35888888877665432211 123346777766666665544 346677778888888888
Q ss_pred ccCCCc
Q 011567 385 SDIHGL 390 (483)
Q Consensus 385 ~~~~~~ 390 (483)
++.+++
T Consensus 275 ~~~p~v 280 (390)
T PRK08133 275 EAHPGV 280 (390)
T ss_pred HhCCCe
Confidence 877654
No 234
>PRK05839 hypothetical protein; Provisional
Probab=99.89 E-value=1.4e-20 Score=190.08 Aligned_cols=330 Identities=15% Similarity=0.111 Sum_probs=204.9
Q ss_pred CeeEEEeecCC-CCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC---CCCEEEeccc-HHHH
Q 011567 108 GKEVVNFASAN-YLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG---TPDSILYSYG-LSTM 182 (483)
Q Consensus 108 G~~~id~~s~~-~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g---~e~~i~~~sG-~~a~ 182 (483)
|++++||..+. .++ ..+.+.+++.+..... ...+. ..|..++.+.+++.+++..| .++.|+.++| .+++
T Consensus 23 ~~~~i~l~~~~p~~~--~~~~~~~a~~~~~~~~-~~Y~~---~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al 96 (374)
T PRK05839 23 EYKGLDLTIGEPQFE--TPKFIQDALKNNAHLL-NKYPK---SAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVL 96 (374)
T ss_pred CCCeEEcCCCCCCCC--CCHHHHHHHHHHhhcc-CCCCC---CCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHH
Confidence 77899999973 344 3477777777655431 11111 22344555555666666556 2344555555 5677
Q ss_pred Hhhhhhhc--cCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCC-----HHHHHHHHHHhhhhhhhccCccEEEEEeccc
Q 011567 183 FSAIPCFC--KKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHND-----MDSLRNTLERVTADNKRAKKLRRYIVVEAVY 255 (483)
Q Consensus 183 ~~ai~~~~--~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d-----~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~ 255 (483)
..++.++. ++||.|+++.+++..+...+...|.+++.++.+. ++..+..+ . .+++|++...+
T Consensus 97 ~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~~----~-------~~k~v~i~nP~ 165 (374)
T PRK05839 97 FNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKEL----Q-------EVDLVILNSPN 165 (374)
T ss_pred HHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhhh----c-------cccEEEEeCCC
Confidence 77777663 6899999999999988888888899988886531 11111111 1 25666666888
Q ss_pred CCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCcccccc---CCCCCceeEEEccccccccCCC---ceee
Q 011567 256 QNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHC---GVPVDKIDIVTAAMGHALATEG---GFCT 326 (483)
Q Consensus 256 ~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~---~v~~~~~Di~~~s~~K~lg~~G---G~i~ 326 (483)
|++|.+.+ +++|+++|++||+++|+||+|.....+.....+.... +....+.-|+++||||.++.+| ||++
T Consensus 166 NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii 245 (374)
T PRK05839 166 NPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIA 245 (374)
T ss_pred CCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEe
Confidence 99999988 7888899999999999999998643221100111100 0101123588899999997666 9999
Q ss_pred ccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEec
Q 011567 327 GSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILE 406 (483)
Q Consensus 327 ~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~ 406 (483)
+++++++.++.......++ .+.....++.+++..-....+.++.++++.+.+.+.| ++. .+..+.++++.++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l----~~~--~p~gg~fi~~~~~ 317 (374)
T PRK05839 246 GDASILKKYKAYRTYLGCA--SPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL----GIT--IPPATFYVWLPVD 317 (374)
T ss_pred cCHHHHHHHHHHHhhcCCC--CChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc----CCC--CCCeeEEEEEeCC
Confidence 9999988775442221222 2333344444344211111235666666666666654 322 2346777777763
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 407 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
+ ..+++.++++++||.+.++.+...+.. .++.+||++. .++++++++++.|++++.
T Consensus 318 ~-----------~~~~~~~l~~~~gi~v~pg~~f~~~~~-~~~~iRis~~--~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 318 N-----------DEEFTKKLYQNEGIKVLPGSFLGRNGI-GKGYVRIALV--YDTPKLEKALEIIKTYLE 373 (374)
T ss_pred C-----------hHHHHHHHHHHCCEEEeCchhhCCCCC-CCCeEEEEec--CCHHHHHHHHHHHHHHhh
Confidence 1 125677777667999998754322111 1355999985 479999999999988763
No 235
>PLN02651 cysteine desulfurase
Probab=99.89 E-value=4.5e-21 Score=193.02 Aligned_cols=311 Identities=18% Similarity=0.149 Sum_probs=206.0
Q ss_pred CChHHHHHHHHHHHh-cCCCCC-CCCCcccChHHHHHHHHHHHhhhCCC-C-EEEecccHHHHHhhhhh----hccCCcE
Q 011567 124 GHEKLLESCTSALEK-YGVGSC-GPRGFYGTIDVHLDCEARIAKFLGTP-D-SILYSYGLSTMFSAIPC----FCKKGDL 195 (483)
Q Consensus 124 ~~p~i~~a~~~~l~~-~g~g~~-~~~~~~g~~~~~~~l~~~La~~~g~e-~-~i~~~sG~~a~~~ai~~----~~~~gdi 195 (483)
.++++.+++.+.+.. ++.... +........+...++++.+++++|.+ + .++.++|++++..++.+ +.++||.
T Consensus 11 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~ 90 (364)
T PLN02651 11 IDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKH 90 (364)
T ss_pred CCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCE
Confidence 467888988888765 332111 00000112356788999999999965 3 44556777887666544 3578999
Q ss_pred EEEcCCchhHHHhHh---hhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHH
Q 011567 196 IVADEGVHWGIQNGL---YLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDEL 267 (483)
Q Consensus 196 I~~~~~~h~s~~~g~---~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l 267 (483)
|++....|.++.... ...|.+++.++.+ |++++++.+++ .++++++..+.+++|.+.|+++|
T Consensus 91 vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~----------~t~lv~v~~~~n~tG~~~~l~~I 160 (364)
T PLN02651 91 VITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIRP----------DTALVSVMAVNNEIGVIQPVEEI 160 (364)
T ss_pred EEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCC----------CcEEEEEECCCCCceecccHHHH
Confidence 999998888765443 3456777666542 56677766632 26789999999999999999999
Q ss_pred HHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccHHHHHHHHhcCC--ce--
Q 011567 268 IRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSS--GY-- 342 (483)
Q Consensus 268 ~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~~~~~~~~~~~~--~~-- 342 (483)
.++|++||+++++|++|+.|.+. +++...++|++++|.+|.+|+.| |++..+++..+.+..... ++
T Consensus 161 ~~~~~~~g~~~~vD~a~~~g~~~---------~~~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~~~~~l~p~~~g~~~~~ 231 (364)
T PLN02651 161 GELCREKKVLFHTDAAQAVGKIP---------VDVDDLGVDLMSISGHKIYGPKGVGALYVRRRPRVRLEPLMSGGGQER 231 (364)
T ss_pred HHHHHHcCCEEEEEcchhhCCcc---------cCcccCCCCEEEechhhhCCCCceEEEEEcCCCCCCCCccccCCCccC
Confidence 99999999999999999976542 23333456999999999877665 777666654433321111 10
Q ss_pred -eecCCCcHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHhhcc-CCCceeecC--CC---CCEEEEEecCCCCCchh
Q 011567 343 -VFSASLPPYLASAAITAIDVLEEN-PDLITKLKKNTAILRTGLSD-IHGLSIASN--PE---SPIVFLILEKSTGSMKN 414 (483)
Q Consensus 343 -~fs~~~~p~~~aaa~~al~~l~~~-~~~~~~l~~~~~~l~~~L~~-~~~~~i~~~--~~---~~i~~l~l~~~~~~~~~ 414 (483)
...++.|...+.+..++++++.+. +.+.++.++..+++.+.|++ ++++++.++ +. .+++.+.++...
T Consensus 232 ~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~----- 306 (364)
T PLN02651 232 GRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVE----- 306 (364)
T ss_pred CccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCC-----
Confidence 123345666667777888887643 45678888899999999875 578888763 11 337777774211
Q ss_pred hHHHHHHHHHHHHHhCCEEEEeecccccc---------cCC-----CCCceEEEccCCCCHHHHH
Q 011567 415 DLQLLEDIADWALKEDGVFVVTSKRSMLD---------KCR-----LPVGIRLFVSAAHSEADLV 465 (483)
Q Consensus 415 ~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~---------~~~-----~~~~lRi~~~~~~t~edi~ 465 (483)
..+++.. |.+ |.++.+..+... ... ..+.+|++++..+|++|||
T Consensus 307 ----~~~~~~~-L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 307 ----GESLLMG-LKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred ----HHHHHHH-hCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 2245554 443 777654422110 000 1245999999999999985
No 236
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.89 E-value=2.9e-20 Score=186.33 Aligned_cols=321 Identities=20% Similarity=0.230 Sum_probs=210.8
Q ss_pred CeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEe-cccHHHHHh
Q 011567 108 GKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILY-SYGLSTMFS 184 (483)
Q Consensus 108 G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~-~sG~~a~~~ 184 (483)
+++++||+.+ +.++. ++.+.+++.+.+... . .|.... ..+|++++|++++.+ +.+++ +++++++..
T Consensus 18 ~~~~~~l~~~~~~~~~--p~~~~~a~~~~~~~~-~-------~Y~~~~-~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~ 86 (354)
T PRK06358 18 KNMILDFSANINPLGV--PESLKQAITENLDKL-V-------EYPDPD-YLELRKRIASFEQLDLENVILGNGATELIFN 86 (354)
T ss_pred ccceEEecCCCCCCCC--CHHHHHHHHHHHHhh-h-------cCCCcc-HHHHHHHHHHHhCCChhhEEECCCHHHHHHH
Confidence 3457999887 55555 588888888876542 1 122222 468999999999854 34544 555688888
Q ss_pred hhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCC-----HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCC
Q 011567 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHND-----MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSG 259 (483)
Q Consensus 185 ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d-----~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G 259 (483)
+++++ .+ +.|+++.+++..+...++..|.+++.++.++ ++ ++.++.... ..+++++...+|++|
T Consensus 87 ~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d--~~~~~~~~~-------~~~~v~~~~P~NPtG 155 (354)
T PRK06358 87 IVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN--EIVLEEIKE-------EIDLVFLCNPNNPTG 155 (354)
T ss_pred HHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc--HHHHHhhcc-------CCCEEEEeCCCCCCC
Confidence 88876 44 4577788888888888888888888776431 22 222332221 144544445588999
Q ss_pred CccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeec-cHHHH
Q 011567 260 QIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTG-SARVV 332 (483)
Q Consensus 260 ~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~-~~~~~ 332 (483)
.+.+ +++|+++|++|++++|+||+|............... ++..+.-|+++||||.+|..| ||+++ ++.++
T Consensus 156 ~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~--~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~ 233 (354)
T PRK06358 156 QLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINY--LENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLA 233 (354)
T ss_pred CccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHh--ccCCCCEEEEEechhhccCcchhheeeecCCHHHH
Confidence 9988 788999999999999999999866543211111111 222234588899999998666 99987 46777
Q ss_pred HHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCc
Q 011567 333 DHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSM 412 (483)
Q Consensus 333 ~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~ 412 (483)
+.+...... + +.+.....++.++++.-....+.++.++++.+.+.+.|++.+++.+.. +.++++++.+++
T Consensus 234 ~~~~~~~~~--~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~g~f~~~~~~~----- 303 (354)
T PRK06358 234 EKLLQMREP--W--SINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYK-PSVNFIFFKLEK----- 303 (354)
T ss_pred HHHHHhCCC--C--cchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcC-CcceEEEEEcCc-----
Confidence 777554332 2 234444445555553211113456777888899999998877776654 466777777632
Q ss_pred hhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 413 KNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 413 ~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
. .++++.+++ +||.+.+...... ..++.+||++ -++++.++++++|++++
T Consensus 304 --~----~~~~~~l~~-~gI~v~~~~~f~~---~~~~~iRls~---~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 304 --P----IDLRKELLK-KGILIRSCSNYRG---LDENYYRVAV---KSREDNKKLLKALEVIL 353 (354)
T ss_pred --h----HHHHHHHHH-CCeEEEECCCCCC---CCCCEEEEEe---CCHHHHHHHHHHHHHHh
Confidence 1 357776665 5999998754310 0123499998 57899999999998764
No 237
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.89 E-value=1.3e-20 Score=194.82 Aligned_cols=308 Identities=15% Similarity=0.144 Sum_probs=201.7
Q ss_pred HHHHHHHHhhhC---------CCCEEEe-cccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhh-hcCCeEEEecCC--
Q 011567 157 LDCEARIAKFLG---------TPDSILY-SYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY-LSRSTVVYFKHN-- 223 (483)
Q Consensus 157 ~~l~~~La~~~g---------~e~~i~~-~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~-~s~~~v~~~~~~-- 223 (483)
.+|++.||++++ .++.|+. +++.+++..++.+++++||.|+++.++|..+...+. ..|.+++.++..
T Consensus 89 ~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~ 168 (468)
T PLN02450 89 PAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSS 168 (468)
T ss_pred HHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCc
Confidence 456666666653 2233555 555688889999999999999999999988877777 478888877642
Q ss_pred -----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCC-C
Q 011567 224 -----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSG-R 294 (483)
Q Consensus 224 -----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G-~ 294 (483)
|++.+++.+++... ...++++|++..++|++|.+.+ +++|+++|++|++++|+||+|+...+.... .
T Consensus 169 ~~~~~~~~~le~~~~~~~~----~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~ 244 (468)
T PLN02450 169 NGFQITESALEEAYQQAQK----LNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFV 244 (468)
T ss_pred cCCcCCHHHHHHHHHHHHh----cCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcc
Confidence 45777777655321 1113555555567889999988 788899999999999999999865543210 0
Q ss_pred cccccc------CCCCCceeEEEccccccccCCC---ceeeccHH-HHHHHHhcCCceeecCCCcHHHHHHHHHHHHHH-
Q 011567 295 GLTEHC------GVPVDKIDIVTAAMGHALATEG---GFCTGSAR-VVDHQRLSSSGYVFSASLPPYLASAAITAIDVL- 363 (483)
Q Consensus 295 g~~~~~------~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~-~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l- 363 (483)
...+.. +.++.+.-++++||||.+|..| ||++++++ +.+.+.... . ++. .+.....++.+.|+.-
T Consensus 245 s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~-~--~~~-~s~~~Q~a~~~~L~~~~ 320 (468)
T PLN02450 245 SVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMS-S--FGL-VSSQTQYLLSALLSDKK 320 (468)
T ss_pred cHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHh-h--cCC-CCHHHHHHHHHHhCCch
Confidence 111111 1112334688899999998666 99998754 555544331 2 221 2444444444444321
Q ss_pred --h-cCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccc
Q 011567 364 --E-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRS 440 (483)
Q Consensus 364 --~-~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~ 440 (483)
. ...+.+++++++.+.+.+.|++. |+++..+..+.++++.++..... .......++...++++.||.+.++...
T Consensus 321 ~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~~~~~g~flwi~l~~~~~~--~~~~~~~~l~~~ll~~~gV~v~PG~~f 397 (468)
T PLN02450 321 FTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCLKSNAGLFCWVDMRHLLKS--NTFEAEMELWKKIVYEVKLNISPGSSC 397 (468)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCceEEEEEEchHhcCc--CCchHHHHHHHHHHHhCCEEEeCcccc
Confidence 0 01235777888888999999886 87766554566888887532111 011112356677777789999987543
Q ss_pred ccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 441 MLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 441 ~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
.. ..++.+|++++. .+++++++++++|++++.+..
T Consensus 398 ~~---~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 398 HC---TEPGWFRVCFAN-MSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred CC---CCCCEEEEEecC-CCHHHHHHHHHHHHHHHHhcc
Confidence 21 113459999875 578999999999999987655
No 238
>PRK05968 hypothetical protein; Provisional
Probab=99.89 E-value=3.3e-21 Score=194.82 Aligned_cols=285 Identities=19% Similarity=0.185 Sum_probs=202.8
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHH----hHhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~----~g~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+||+++|+++|.+.++++++|+.|+..++.++.++||.|++....|.+.. ..+...|.++..++.+|+++++
T Consensus 63 p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~ 142 (389)
T PRK05968 63 PTVRAFEEMLAKLEGAEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAVA 142 (389)
T ss_pred hhHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHHH
Confidence 457899999999999999999999999999999999999999888888777643 3455568888888888888888
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+. ++++|++|.+.++.+.+.|+++|.++|++||+++|+|++++.+.... .+ + ..+|+
T Consensus 143 ~~i~-----------~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~---p~-~------~g~Di 201 (389)
T PRK05968 143 KALP-----------GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQR---PI-T------LGVDL 201 (389)
T ss_pred Hhcc-----------cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccC---ch-h------cCCcE
Confidence 7652 25788889988888999999999999999999999999997664321 11 1 23489
Q ss_pred EEccccccccC----CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhc
Q 011567 310 VTAAMGHALAT----EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLS 385 (483)
Q Consensus 310 ~~~s~~K~lg~----~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~ 385 (483)
++.|++|.+++ .||++++++++++.++.....+ ++..++|+.++.++..|+.+ +...++-.++++.+.+.|+
T Consensus 202 vv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~-~g~~~~~~~A~~~l~~L~tl---~~r~~~~~~~a~~la~~L~ 277 (389)
T PRK05968 202 VIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPY-LGAKLSPFEAWLLLRGLRTL---PLRMKAHEASALEIARRLK 277 (389)
T ss_pred EEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHh-CCCCCChHHHHHHHcccCcH---HHHHHHHHHHHHHHHHHHH
Confidence 99999999974 3688889988887766432222 23457788888777777655 4467777888999999999
Q ss_pred cCCCceeecC------------CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc-----------
Q 011567 386 DIHGLSIASN------------PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML----------- 442 (483)
Q Consensus 386 ~~~~~~i~~~------------~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~----------- 442 (483)
+++++..+.. ..+.++.+.++. .....++++. |+..++.++-+...++
T Consensus 278 ~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~--------~~~~~~f~~~-L~~~~~~~s~G~~~slv~p~~~~~~~~ 348 (389)
T PRK05968 278 AHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE--------GIDVRAFADA-LKLFRLGVSWGGHESLVVPAEVVLQQK 348 (389)
T ss_pred hCCCccEEECCCCCCChHHhCCCCceEEEEEECC--------HHHHHHHHHh-CCccEEecCCCCCCceeeeCccccccc
Confidence 8887643321 124588888742 1124466664 4444444443322220
Q ss_pred --c----cCCC-CCceEEEccCCCCHHHHHHHHHHHH
Q 011567 443 --D----KCRL-PVGIRLFVSAAHSEADLVKACESLK 472 (483)
Q Consensus 443 --~----~~~~-~~~lRi~~~~~~t~edi~~~~~~l~ 472 (483)
. .... +.-||+++....+++=++.+-.+|+
T Consensus 349 ~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~ 385 (389)
T PRK05968 349 AQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALA 385 (389)
T ss_pred CCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 0 1111 2249999988655554444444444
No 239
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.89 E-value=2.7e-20 Score=188.63 Aligned_cols=332 Identities=16% Similarity=0.131 Sum_probs=215.7
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhH
Q 011567 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWG 205 (483)
Q Consensus 126 p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s 205 (483)
..+.++..+++..-..+ |+...-..+|++.+++++|.+.++.+++|++|+..++.+++++||.|+ ..+.+.+
T Consensus 32 ~ams~~~~~a~~~gd~~-------Y~~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~al~~pGD~V~-~~~~f~~ 103 (431)
T cd00617 32 GAMSDYQWAAMMLGDEA-------YAGSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSILLKPGRTVP-SNMHFDT 103 (431)
T ss_pred HHHHHHHHHHHHhCCCc-------cCCCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHhCCCCCEEc-cCCcccc
Confidence 35666666666542222 333333578999999999999999999999999999999999999874 5555556
Q ss_pred HHhHhhhcCCeEEEecC---------------CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCC-CCccC---hHH
Q 011567 206 IQNGLYLSRSTVVYFKH---------------NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNS-GQIAP---LDE 266 (483)
Q Consensus 206 ~~~g~~~s~~~v~~~~~---------------~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~-G~i~~---L~~ 266 (483)
+...+...|.+++.++. -|+++|++.+.+.. +..+++|+++...|.+ |.+.+ +++
T Consensus 104 ~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~------~~~~~~I~v~~p~N~~gG~~~s~~~l~~ 177 (431)
T cd00617 104 TRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVG------AENIPYIVLTITNNTAGGQPVSMANLRE 177 (431)
T ss_pred hHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCccc------CCCccEEEEECCcCCCCCccCCHHHHHH
Confidence 66677788877665432 26788888876431 1136777777666654 88876 568
Q ss_pred HHHHHHHcCcEEEEeCcccccc-c-------cCCCCcccc----ccCCCCCceeEEEcccccccc-CCCceeeccH-HHH
Q 011567 267 LIRLKEKYRFRVFLDESNSFGV-L-------GRSGRGLTE----HCGVPVDKIDIVTAAMGHALA-TEGGFCTGSA-RVV 332 (483)
Q Consensus 267 l~~l~~k~~~~li~DEa~s~g~-l-------g~~G~g~~~----~~~v~~~~~Di~~~s~~K~lg-~~GG~i~~~~-~~~ 332 (483)
|.++|++||++||.|+++..+- + |..+..+.+ .+.. .|..+.|+.|..+ ..||++++++ +++
T Consensus 178 i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~----sd~~~mS~~K~~~~~~GG~i~~~d~~l~ 253 (431)
T cd00617 178 VRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSY----ADGCTMSAKKDGLVNIGGFLALRDDELY 253 (431)
T ss_pred HHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhcc----CCEEEEEeecCCCCccceEEEeCcHHHH
Confidence 8999999999999999976431 1 111121111 1111 2666667778765 4589999986 588
Q ss_pred HHHHhcC---CceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCC
Q 011567 333 DHQRLSS---SGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKST 409 (483)
Q Consensus 333 ~~~~~~~---~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~ 409 (483)
+.++... .++...+++++...++...+|+...+ .+..+...++.+++.+.|.+. |+++..+.++..+++....-.
T Consensus 254 ~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~-~~~l~~~~~~r~~l~~~L~~~-G~~v~~P~Ggh~v~~d~~~~~ 331 (431)
T cd00617 254 EEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE-EDYLRHRVEQVRYLGDRLDEA-GVPIVEPAGGHAVFIDAREFL 331 (431)
T ss_pred HHHHHhccccCCccccccccHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHC-CCCccCCCcceEEEEEhHHhc
Confidence 8776432 22322234555555544335543222 233444455668899999987 999887777888888764311
Q ss_pred CCchhhHHHHHHHHHHHHHhCCEEEEeecc------cccccCC--CCCceEEEccC-CCCHHHHHHHHHHHHHHHHH
Q 011567 410 GSMKNDLQLLEDIADWALKEDGVFVVTSKR------SMLDKCR--LPVGIRLFVSA-AHSEADLVKACESLKRISAV 477 (483)
Q Consensus 410 ~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~------~~~~~~~--~~~~lRi~~~~-~~t~edi~~~~~~l~~~~~~ 477 (483)
+....+.-..+.++.+++++.||.+.-... +.-.... ..+.+|+.++- ..|.+++|.+++++..+.++
T Consensus 332 ~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 332 PHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred CCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 100001112557787888888998653221 1111111 12569998876 67999999999999988765
No 240
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.89 E-value=2.9e-21 Score=183.52 Aligned_cols=324 Identities=19% Similarity=0.250 Sum_probs=218.1
Q ss_pred EEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhcc
Q 011567 112 VNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCK 191 (483)
Q Consensus 112 id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~ 191 (483)
+||.|-|+-| .+|++.+++.++-.-. . ..||..+...++++.+++.+|.+.++|+.||++||..++.+.++
T Consensus 2 ~~f~SDn~~g--~~~~m~eam~~a~~~~---~----~~YG~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~ 72 (342)
T COG2008 2 IDFRSDNVAG--PTPEMREALAAANAVG---D----DVYGEDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQ 72 (342)
T ss_pred CccccCccCC--CCHHHHHHHHhccccC---C----CCCCCCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcC
Confidence 5777777766 4699999887654321 1 26899999999999999999998888889999999999999999
Q ss_pred CCcEEEEcCCchhHHHh--Hhhh-c-CCeEEEecCC----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC
Q 011567 192 KGDLIVADEGVHWGIQN--GLYL-S-RSTVVYFKHN----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP 263 (483)
Q Consensus 192 ~gdiI~~~~~~h~s~~~--g~~~-s-~~~v~~~~~~----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~ 263 (483)
|+..|++.+..|-...+ ++.. + +.++...+-+ ++++++..+...+. .. .++..++.+...+..|.+.|
T Consensus 73 ~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~---~~-~~~~~~~~e~~~te~GtVy~ 148 (342)
T COG2008 73 PGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDI---HH-APTPLAVLENTATEGGTVYP 148 (342)
T ss_pred CCCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCc---cc-CCCceEEEeeccCCCceecC
Confidence 99999999999976653 2332 2 2344444422 68888887765211 11 13556666666668899998
Q ss_pred ---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccHHHHHHHHhcC
Q 011567 264 ---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSS 339 (483)
Q Consensus 264 ---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~~~~~~~~~~~ 339 (483)
|++|.++|++||+.|++|.+.=+-.+-.-|.-..+ + ...+|++..+++|.++.++ ..++++.+.++..+...
T Consensus 149 l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~---~-~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a~~~r 224 (342)
T COG2008 149 LDELEAISAVCKEHGLPLHMDGARLANALVALGVALKT---I-KSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRARRWR 224 (342)
T ss_pred HHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHH---H-HhhCCEEEEecccCCcceeeeEEEcCHHHHHHHHHHH
Confidence 67888999999999999987522222111111111 1 1446899999999998665 55788988877654322
Q ss_pred C--ceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHH--HHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 011567 340 S--GYVFSASLPPYLASAAITAIDVLEENPDLITKLKKN--TAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 415 (483)
Q Consensus 340 ~--~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~--~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~ 415 (483)
. +-.++- .-+.+++....| +++-.+.....+| +.+|.+.|...+|+++..+++++++++.+++..
T Consensus 225 K~~Ggl~~k--~r~laA~~~~~l---~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~------ 293 (342)
T COG2008 225 KRAGGLMRK--ARFLAAQGLYAL---EDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESA------ 293 (342)
T ss_pred HHhcccHhh--hhHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChHH------
Confidence 1 112221 234444444444 3332334444444 999999999778999998889999999985321
Q ss_pred HHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 416 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 416 ~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
.. ...... .+...|+++.... ..+|+..+...|++||++++..+++++
T Consensus 294 i~-~l~~~~-~~~~~~~~~~~~~----------~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 294 IE-ALRLAG-ALFYRGVLIGAHG----------EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred HH-HHHhhc-hhheeeeeccCCC----------ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 11 011111 1223355554332 128999999999999999999998764
No 241
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1e-19 Score=185.07 Aligned_cols=328 Identities=14% Similarity=0.160 Sum_probs=213.9
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC--------CCCEEEecccH
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG--------TPDSILYSYGL 179 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g--------~e~~i~~~sG~ 179 (483)
+..++||+.++. .+...+.+.+++.+.++...... ..|+......++++.++++++ .++.+++++++
T Consensus 32 ~~~~~~l~~g~p-~~~~~~~v~~a~~~~~~~~~~~~----~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~ 106 (394)
T PRK06836 32 ADNVFDFSLGNP-SVPPPAAVKEALRELAEEEDPGL----HGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAA 106 (394)
T ss_pred CCCeEEecCcCC-CCCCCHHHHHHHHHHHhcCCcCc----ccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChH
Confidence 346789988753 23345778888877766421111 123333334566677777663 23455567777
Q ss_pred HHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC------CHHHHHHHHHHhhhhhhhccCccEEEEEec
Q 011567 180 STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKRAKKLRRYIVVEA 253 (483)
Q Consensus 180 ~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~ 253 (483)
+++..++++++++||.|+++.+++......++..|.+++.++.+ |++++++.+.. ++++|++.+
T Consensus 107 ~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~----------~~~~v~~~~ 176 (394)
T PRK06836 107 GALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITP----------KTKAVIINS 176 (394)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCc----------CceEEEEeC
Confidence 89999999999999999999998888877778788888887642 46666665532 256677777
Q ss_pred ccCCCCCccC---hHHHHHHHHH------cCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC--
Q 011567 254 VYQNSGQIAP---LDELIRLKEK------YRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-- 322 (483)
Q Consensus 254 v~~~~G~i~~---L~~l~~l~~k------~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-- 322 (483)
+++++|.+.| +++|+++|++ ||+++|+||+|.....+. ......... .+..++++|+||.+|.+|
T Consensus 177 p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~--~~~~i~~~S~SK~~~~pGlR 252 (394)
T PRK06836 177 PNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDG--AEVPYIFKY--YDNSIVVYSFSKSLSLPGER 252 (394)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCC--CCCCChHHc--cCcEEEEecchhhccCccee
Confidence 8899999988 6778888999 899999999998655432 111111111 123788999999998666
Q ss_pred -ceeeccHHHHHHHH------hcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecC
Q 011567 323 -GFCTGSARVVDHQR------LSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASN 395 (483)
Q Consensus 323 -G~i~~~~~~~~~~~------~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~ 395 (483)
||+++++++.+..+ .......+ ...++....++...+ ++ ....+.++++.+.+.+.|++. |+.+..+
T Consensus 253 iG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~q~~~~~~l---~~-~~~~~~~~~~r~~l~~~L~~~-g~~~~~~ 326 (394)
T PRK06836 253 IGYIAVNPEMEDADDLVAALVFANRILGF-VNAPALMQRVVAKCL---DA-TVDVSIYKRNRDLLYDGLTEL-GFECVKP 326 (394)
T ss_pred eEEEecCHHHhhhHHHHHHHHHHhhcccc-ccCCHHHHHHHHHHh---CC-hHHHHHHHHHHHHHHHHHHhC-CCEeecC
Confidence 99998877643211 11111011 122444434333333 22 234566777888888888886 7776655
Q ss_pred CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 396 PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 396 ~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
..+.++++.++.. + ..++++. +.++||.+.+...... +..+||++. .++++++++++.|++++
T Consensus 327 ~gg~~~~~~~~~~------~---~~~~~~~-l~~~gv~v~~g~~f~~-----~~~iRi~~~--~~~~~~~~~i~~l~~~l 389 (394)
T PRK06836 327 QGAFYLFPKSPEE------D---DVAFCEK-AKKHNLLLVPGSGFGC-----PGYFRLSYC--VDTETIERSLPAFEKLA 389 (394)
T ss_pred CceEEEEEeCCCC------C---HHHHHHH-HHhCCEEEECchhcCC-----CCeEEEEec--CCHHHHHHHHHHHHHHH
Confidence 4566777666321 1 2245654 4556999988654321 345999997 58999999999999988
Q ss_pred HH
Q 011567 476 AV 477 (483)
Q Consensus 476 ~~ 477 (483)
++
T Consensus 390 ~~ 391 (394)
T PRK06836 390 KE 391 (394)
T ss_pred HH
Confidence 65
No 242
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.89 E-value=2e-20 Score=186.12 Aligned_cols=302 Identities=15% Similarity=0.148 Sum_probs=200.7
Q ss_pred eeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC--CEEEecccH-HHHHh
Q 011567 109 KEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGL-STMFS 184 (483)
Q Consensus 109 ~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e--~~i~~~sG~-~a~~~ 184 (483)
.+++||++| |++|.+..+ +. ...+.+|. +...+|++.||+++|.. +.|+.++|+ +++..
T Consensus 24 ~~~i~ls~Nenp~~~~~~~-~~---~~~~~~Yp-------------~~~~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~ 86 (339)
T PRK06959 24 DAWLDLSTGINPHGYPVPP-VP---ADAWRRLP-------------EDDDGLAACAARYYGAPDAAHVLPVAGSQAAIRA 86 (339)
T ss_pred hhhceeccCCCCCCCCCCC-CC---HHHHHhCC-------------CchHHHHHHHHHHhCCCCcccEEECcCHHHHHHH
Confidence 468999999 999884222 21 13344442 22278999999999974 466666665 56554
Q ss_pred hhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccCh
Q 011567 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPL 264 (483)
Q Consensus 185 ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L 264 (483)
+ ..+.++|+ |++..+++..+...++..|.+++.++.++ +.+ .+ . ...++++.| +|++|.+.+.
T Consensus 87 l-~~~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~-~~~----~~---~------~~~v~l~nP-nNPTG~~~s~ 149 (339)
T PRK06959 87 L-PALLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA-DTL----PA---A------LTHLIVVNP-NNPTAERLPA 149 (339)
T ss_pred H-HHhcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc-hhc----cc---c------CCEEEEeCC-CCCCCCCCCH
Confidence 4 44567787 66688899888889999999988876543 111 11 1 124455554 7899999995
Q ss_pred HHH---HHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHHHhc
Q 011567 265 DEL---IRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLS 338 (483)
Q Consensus 265 ~~l---~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~~~ 338 (483)
+++ ++.|++++.++|+||+|..+... ..+.... . .+.-++++||||++|..| ||+++++++++.++..
T Consensus 150 ~~l~~l~~~~~~~~~~vI~DEay~~~~~~---~s~~~~~--~-~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~~ 223 (339)
T PRK06959 150 ARLLRWHAQLAARGGTLIVDEAFADTLPA---ASLAAHT--D-RPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAALRDA 223 (339)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCccCCCc---ccchhcc--C-CCCEEEEecChhhcCCcchheEEEecCHHHHHHHHHh
Confidence 555 45567889999999999864321 1121111 1 122478899999999878 9999999999988765
Q ss_pred CCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHH
Q 011567 339 SSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQL 418 (483)
Q Consensus 339 ~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~ 418 (483)
...+ + .+.....++.++|+.-....+.++.++++.+++.+.|+++ |+.+. +.+.++++.+. +
T Consensus 224 ~~~~--~--vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~f~~~~~~--------~--- 285 (339)
T PRK06959 224 LGAW--T--VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH-GFAVH--ATPLFSWTDDP--------R--- 285 (339)
T ss_pred cCCC--C--CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcc--CcceEEEEeCC--------C---
Confidence 4433 2 3455566666666432222356788888999999999886 77654 23445555542 1
Q ss_pred HHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 419 LEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 419 ~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
..++.+.++ ++||+++.... ++.+||++. .+++|+++++++|+++++.+.
T Consensus 286 ~~~l~~~l~-~~GI~vr~~~~--------~~~lRisi~--~~~~e~~~l~~al~~~~~~~~ 335 (339)
T PRK06959 286 AAALHAALA-RRGIWTRYFAP--------PPSVRFGLP--ADEAEWQRLEDALAECVPTLA 335 (339)
T ss_pred HHHHHHHHH-hCCeEEEECCC--------CCeEEEECC--CCHHHHHHHHHHHHHHHHHHh
Confidence 235666544 56999974311 246999974 467899999999998877653
No 243
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=3.5e-20 Score=187.16 Aligned_cols=323 Identities=15% Similarity=0.164 Sum_probs=208.6
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcC-CCCCCCCCcccChHHHHHHHHHHHhhhCC---------CCEEEeccc
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYG-VGSCGPRGFYGTIDVHLDCEARIAKFLGT---------PDSILYSYG 178 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g-~g~~~~~~~~g~~~~~~~l~~~La~~~g~---------e~~i~~~sG 178 (483)
+.++++.++.+ .+..+|.+.+++.+.+.... .. .|.. .-..+|++.||++++. ++.|+.++|
T Consensus 28 ~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~G 99 (374)
T PRK02610 28 IQLDRLDTNEF-PYDLPPDLKQKLAWLYQQGIESN------RYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVGNG 99 (374)
T ss_pred cceeEecCCCC-CCCCCHHHHHHHHHHHhhccccc------CCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEcCC
Confidence 45899998833 33355899999988776511 11 1211 2246788888888762 133555554
Q ss_pred -HHHHHhhhhhhccCCc-EEEEcCCchhHHHhHhhhcCCeEEEecCC------CHHHHHHHHHHhhhhhhhccCccEEEE
Q 011567 179 -LSTMFSAIPCFCKKGD-LIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKRAKKLRRYIV 250 (483)
Q Consensus 179 -~~a~~~ai~~~~~~gd-iI~~~~~~h~s~~~g~~~s~~~v~~~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~iv 250 (483)
.+++..++.+++.++| .|+++.+++..+...++..|.+++.++.. |+++|++.+++.... ++++|+
T Consensus 100 a~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~------~~k~i~ 173 (374)
T PRK02610 100 SDELIRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNP------PVRVVF 173 (374)
T ss_pred hHHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCC------CceEEE
Confidence 5777777777777775 89999999999998899999998887632 567777776542111 256666
Q ss_pred EecccCCCCCccChHHHHHHHH-HcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceee
Q 011567 251 VEAVYQNSGQIAPLDELIRLKE-KYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCT 326 (483)
Q Consensus 251 ~e~v~~~~G~i~~L~~l~~l~~-k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~ 326 (483)
+.+.+|++|...+.+++.++.+ .+++++|+||+|.... + ...... +...+.-|+++||||++|.+| ||++
T Consensus 174 l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~-~---~~~~~~--~~~~~~~ivi~SfSK~~g~~GlRiG~~v 247 (374)
T PRK02610 174 VVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFS-Q---TTLVGE--LAQHPNWVILRTFSKAFRLAAHRVGYAI 247 (374)
T ss_pred EeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccC-c---cchHHH--HhcCCCEEEEEecchhccCcccceeeee
Confidence 6567899999999655555543 1489999999997542 1 111111 111122477899999998777 9999
Q ss_pred ccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEec
Q 011567 327 GSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILE 406 (483)
Q Consensus 327 ~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~ 406 (483)
+++++++.+...... ++ .+.+...++.++++..+...+.+++..+..+.+.+.|++++++.+. +..++++++.++
T Consensus 248 ~~~~l~~~l~~~~~~--~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~~g~f~~~~l~ 322 (374)
T PRK02610 248 GHPELIAVLEKVRLP--YN--LPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQLRVW-PSAANFLYLRLS 322 (374)
T ss_pred cCHHHHHHHHHhcCC--CC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeC-CCcceEEEEeCC
Confidence 999999887654322 22 3455555555555432221122333444456677788776676654 456778888774
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 407 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
... ...++++.+ .++||.+.+. ++.+||++. +.+++++++++|++++.++
T Consensus 323 ~~~--------~~~~~~~~l-~~~gi~v~~~----------~~~lRls~~---~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 323 QDA--------ALAALHQAL-KAQGTLVRHT----------GGGLRITIG---TPEENQRTLERLQAALTQL 372 (374)
T ss_pred CCC--------CHHHHHHHH-HHCCEEEEeC----------CCeEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence 321 123566654 4569998642 134999985 4678999999999887653
No 244
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.89 E-value=2.5e-20 Score=190.50 Aligned_cols=337 Identities=14% Similarity=0.112 Sum_probs=209.1
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----C---CCCEEEecccH-
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G---TPDSILYSYGL- 179 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g---~e~~i~~~sG~- 179 (483)
|+.++|+..++. .+..+|.+.+++.+.+++..... .-..|+...-..+|++.+|+++ | .++.|+.++|+
T Consensus 33 ~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~ 109 (409)
T PRK07590 33 EAKIIRLGIGDV-TQPLPPAVIEAMHKAVDEMGTAE--TFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAK 109 (409)
T ss_pred CCceEEecCcCC-CCCCCHHHHHHHHHHHhcccccC--CccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHH
Confidence 456899998743 23346888999988887632100 0011222222356677777764 3 23456665555
Q ss_pred HHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCe-----------EEEecCCCHHHHHHHHHHhhhhhhhccCccEE
Q 011567 180 STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRST-----------VVYFKHNDMDSLRNTLERVTADNKRAKKLRRY 248 (483)
Q Consensus 180 ~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~-----------v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~ 248 (483)
+++..+ ..+..+||.|+++.+++..+...++..|.+ ++.++.+.-+.++..+.+ . .+++
T Consensus 110 ~al~~l-~~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~--~-------~~k~ 179 (409)
T PRK07590 110 CDTGNI-LDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE--E-------KVDI 179 (409)
T ss_pred HHHHHH-HHhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc--c-------CceE
Confidence 666554 455689999999999999888888888875 666654311111111111 1 2556
Q ss_pred EEEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCC-CceeEEEccccccccCCC--
Q 011567 249 IVVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPV-DKIDIVTAAMGHALATEG-- 322 (483)
Q Consensus 249 iv~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~-~~~Di~~~s~~K~lg~~G-- 322 (483)
|++...+|++|.+.+ +++|+++|++||++||+||+|+...... .-......++. .+..|+++||||++|.+|
T Consensus 180 i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~--~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlR 257 (409)
T PRK07590 180 IYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDP--SLPHSIYEIEGARECAIEFRSFSKTAGFTGTR 257 (409)
T ss_pred EEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCC--CCCcchhhCCCcccceEEEecCccccCCcCce
Confidence 666677899999998 6788889999999999999998654322 11111112221 123577899999998777
Q ss_pred -ceeeccHHHHHHH-----------HhcCCceeecCCCcHHHHHHHHHHHHH--HhcCcHHHHHHHHHHHHHHHhhccCC
Q 011567 323 -GFCTGSARVVDHQ-----------RLSSSGYVFSASLPPYLASAAITAIDV--LEENPDLITKLKKNTAILRTGLSDIH 388 (483)
Q Consensus 323 -G~i~~~~~~~~~~-----------~~~~~~~~fs~~~~p~~~aaa~~al~~--l~~~~~~~~~l~~~~~~l~~~L~~~~ 388 (483)
||+++++++++.+ ........+. +.+.+...++.++++. .....+.++.++++.+.+.+.|++.
T Consensus 258 iG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~- 335 (409)
T PRK07590 258 CAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFN-GVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESA- 335 (409)
T ss_pred eEEEEcCHHHhhhccccchhhhHHHHHHHHhhccc-CcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 9999998888621 0111111221 2244444444444431 1111345777888888899999886
Q ss_pred CceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHH
Q 011567 389 GLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKAC 468 (483)
Q Consensus 389 ~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~ 468 (483)
++.+..+..+.++++.+++.. + ..+++..+++++||.+.++...... ....+||+. ..+++++++++
T Consensus 336 ~~~~~~~~g~~f~wi~~~~~~-----~---~~~~~~~l~~~~gv~v~pg~~f~~~---~~~~iRi~~--~~~~~~l~~~l 402 (409)
T PRK07590 336 GFEVYGGVNAPYIWVKTPDGM-----S---SWDFFDKLLQEANVVGTPGSGFGPS---GEGYFRLSA--FGSRENVLEAM 402 (409)
T ss_pred CCceecCCcceEEEEECCCCC-----C---HHHHHHHHHHHCCEEEeChhHhCCC---CCCEEEEEc--cCCHHHHHHHH
Confidence 777665456778888885421 1 2356666777779999887543210 023599985 35799999999
Q ss_pred HHHHHH
Q 011567 469 ESLKRI 474 (483)
Q Consensus 469 ~~l~~~ 474 (483)
+.|.++
T Consensus 403 ~rl~~~ 408 (409)
T PRK07590 403 ERIKKA 408 (409)
T ss_pred HHHHhh
Confidence 999865
No 245
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.89 E-value=2e-20 Score=185.86 Aligned_cols=283 Identities=14% Similarity=0.125 Sum_probs=190.3
Q ss_pred HHHHHHHHHHhhhCCC-CEEEec-ccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHH
Q 011567 155 VHLDCEARIAKFLGTP-DSILYS-YGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTL 232 (483)
Q Consensus 155 ~~~~l~~~La~~~g~e-~~i~~~-sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l 232 (483)
...+|+++||+++|.+ +.|+.+ ++.+++..++. +.+++++|+. .+++..+...++..|.+++.++.++.+...+.+
T Consensus 41 ~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~~vv~~-~P~y~~y~~~~~~~G~~v~~vp~~~~~~~~~~l 118 (332)
T PRK06425 41 SYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVGNIIIV-EPNFNEYKGYAFTHGIRISALPFNLINNNPEIL 118 (332)
T ss_pred CHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCCcEEEe-CCChHHHHHHHHHcCCeEEEEeCCcccCcHHHH
Confidence 4689999999999964 445554 44577777776 4567776666 788888999999999999888764321112333
Q ss_pred HHhhhhhhhccCccEEEEEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 233 ERVTADNKRAKKLRRYIVVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 233 ~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
++. ++++|++...+|++|.+.+ +++|+++|++||+++|+||+|.....+. ........+ ..+..|
T Consensus 119 ~~~---------~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~-~~~~~~~~~--~~~~vi 186 (332)
T PRK06425 119 NNY---------NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR-AEEDVLLNR--SYGNVI 186 (332)
T ss_pred hhc---------CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccccc-chhHHHHhc--cCCCEE
Confidence 221 2456666678899999988 6778888999999999999998654321 011111111 123368
Q ss_pred EEccccccccCCC---ceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhcc
Q 011567 310 VTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSD 386 (483)
Q Consensus 310 ~~~s~~K~lg~~G---G~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~ 386 (483)
+++||||++|.+| ||+++++++++.++.....+. .+..++++ ......-....+.++.++++.+++.+.|++
T Consensus 187 ~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~~~----~~~~~~~~-l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 261 (332)
T PRK06425 187 IGRSLTKILGIPSLRIGYIATDDYNMKISRKITEPWS----VCDPAIDF-IRSIDLDYVAKHSLDIMENERSYLINNLEA 261 (332)
T ss_pred EEeecHHhcCCchhhheeeecCHHHHHHHHHcCCCCc----cCHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999777 999999999988876443321 22322222 222211111124677788888999999988
Q ss_pred CCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHH
Q 011567 387 IHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVK 466 (483)
Q Consensus 387 ~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~ 466 (483)
+ |+.+..++.++++++.+++ ..++++.+++ +||.+.+....... .++.+||++. ++++.++
T Consensus 262 ~-g~~~~~~~~g~f~~~~~~~-----------~~~~~~~l~~-~gi~v~~~~~f~~~---~~~~iRis~~---~~~~~~~ 322 (332)
T PRK06425 262 M-GFRAAGDPSANFITFMIPD-----------AHDFYSYLLK-NGILVRLLDDYECL---GEQYIRIAIR---RRSFNIK 322 (332)
T ss_pred C-CCEECCCCCceEEEEEcCC-----------HHHHHHHHHH-CCeEEEECCCCCCC---CCCEEEEEeC---CHHHHHH
Confidence 6 7776544577788887631 2356776665 59999886432110 0235999984 7899999
Q ss_pred HHHHHHHHH
Q 011567 467 ACESLKRIS 475 (483)
Q Consensus 467 ~~~~l~~~~ 475 (483)
++++|++++
T Consensus 323 l~~al~~~~ 331 (332)
T PRK06425 323 LVNALRNFL 331 (332)
T ss_pred HHHHHHHHh
Confidence 999998764
No 246
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=1.1e-20 Score=191.16 Aligned_cols=213 Identities=15% Similarity=0.167 Sum_probs=170.8
Q ss_pred hHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHh----HhhhcCCeEEEecCCCHHHH
Q 011567 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSL 228 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~----g~~~s~~~v~~~~~~d~~~L 228 (483)
.+...+||++||++.|.+.++++++|++|+..++.++.++||.|+++...|.++.. .+...|.++..++..|++++
T Consensus 63 ~p~~~~le~~lA~l~g~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~l 142 (398)
T PRK08249 63 NPTVQAFEEKVRILEGAEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQI 142 (398)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHHH
Confidence 36789999999999999999999999999999999999999999999988876543 24456788888888888888
Q ss_pred HHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCcee
Q 011567 229 RNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKID 308 (483)
Q Consensus 229 e~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~D 308 (483)
++.+++ ++++|++|.+.+++|.+.|+++|.++|++||+++|+|++|+.+...+ . .. ..+|
T Consensus 143 ~~~i~~----------~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~---~----l~---~~~D 202 (398)
T PRK08249 143 EAEIAK----------GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQN---P----LA---LGAD 202 (398)
T ss_pred HHhcCC----------CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCC---c----hh---hCCC
Confidence 877743 26899999999999999999999999999999999999998553321 1 11 2358
Q ss_pred EEEccccccccC----CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 309 IVTAAMGHALAT----EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 309 i~~~s~~K~lg~----~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
+++.|++|.+|+ .||++++++++++.++.... ..+..++|..+..++..++.+. ..+++..++++.+.+.|
T Consensus 203 ivv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~--~~g~~~s~~~a~l~l~~l~tL~---~R~~~~~~na~~la~~L 277 (398)
T PRK08249 203 LVIHSATKFLSGHADALGGVVCGSKELMEQVYHYRE--INGATMDPMSAYLILRGMKTLK---LRVRQQQESAMALAKYL 277 (398)
T ss_pred EEeccCceecCCCCCceEEEEECCHHHHHHHHHHHH--hcCCCCCHHHHHHHHhCcchHH---HHHHHHHHHHHHHHHHH
Confidence 999999999974 36888999888887654322 2345678888888888877764 36677888999999999
Q ss_pred ccCCCc
Q 011567 385 SDIHGL 390 (483)
Q Consensus 385 ~~~~~~ 390 (483)
++.+.+
T Consensus 278 ~~~p~v 283 (398)
T PRK08249 278 QTHPKV 283 (398)
T ss_pred HcCCCe
Confidence 876543
No 247
>PRK06460 hypothetical protein; Provisional
Probab=99.88 E-value=9.6e-21 Score=190.57 Aligned_cols=212 Identities=14% Similarity=0.142 Sum_probs=163.1
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCch----hHHHhHhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVH----WGIQNGLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h----~s~~~g~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+|++++|++.|.+.++++++|++|+..++.++.++||.|++..+.+ ..+...++..|.++..++.++.+.++
T Consensus 45 p~~~~L~~~lA~l~g~~~~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~~~l~ 124 (376)
T PRK06460 45 PTVLELTKKIVELENAEMGVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSDNIIE 124 (376)
T ss_pred ccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCHHHHH
Confidence 56789999999999999999999999999999999999999888876543 23345667778888888877655444
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
++++ + ++++|+++.++|++|.+.|+++|+++|++||+++|+||+|+.+... .. +. .++|+
T Consensus 125 ~~~~---~-------~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~---~~------l~-~~~di 184 (376)
T PRK06460 125 KAKS---K-------RYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQ---KP------LE-LGADI 184 (376)
T ss_pred HhcC---C-------CceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccC---Ch------hh-cCCCE
Confidence 4321 1 3689999999999999999999999999999999999998754211 11 11 23589
Q ss_pred EEccccccccC----CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhc
Q 011567 310 VTAAMGHALAT----EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLS 385 (483)
Q Consensus 310 ~~~s~~K~lg~----~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~ 385 (483)
++.|++|++++ .+|++++++++++.++..... ++.+++|..+..++..++.++ ..++++.++++++.+.|+
T Consensus 185 vv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~--~g~~~~~~~a~~~l~~~~~l~---~r~~~~~~n~~~l~~~L~ 259 (376)
T PRK06460 185 VVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRT--LGTSLDPHAAYLTLRGIKTLK---IRMDVINRNAEQIAEFLE 259 (376)
T ss_pred EEeecceeccCCCCceEEEEecCHHHHHHHHHHHHh--cCCCCCHHHHHHHHhchhhHH---HHHHHHHHHHHHHHHHHH
Confidence 99999999974 368999999988887654333 344567766666666666554 478889999999999998
Q ss_pred cCCCc
Q 011567 386 DIHGL 390 (483)
Q Consensus 386 ~~~~~ 390 (483)
+.+.+
T Consensus 260 ~~p~v 264 (376)
T PRK06460 260 GHPKV 264 (376)
T ss_pred cCCCc
Confidence 76543
No 248
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.88 E-value=3.1e-20 Score=190.73 Aligned_cols=351 Identities=16% Similarity=0.164 Sum_probs=218.9
Q ss_pred eEEEeecC-CCCCCCCChHHHHHHHHHHHhcC-----CCCCCCCCcccChHHHHHHHHHHHhhh----C-----CCC-EE
Q 011567 110 EVVNFASA-NYLGLIGHEKLLESCTSALEKYG-----VGSCGPRGFYGTIDVHLDCEARIAKFL----G-----TPD-SI 173 (483)
Q Consensus 110 ~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g-----~g~~~~~~~~g~~~~~~~l~~~La~~~----g-----~e~-~i 173 (483)
-+||++.. |.|-+ ..+.+.+.+..+.-. ...+..-..|+...-..+|++.+|+++ | .++ .+
T Consensus 48 g~i~l~~aeN~l~~---d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Iv 124 (447)
T PLN02607 48 GVIQMGLAENQVSF---DLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIV 124 (447)
T ss_pred ceEEEechhhhhhH---HHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeE
Confidence 38888886 66533 567766666543100 000000011211122345555555554 3 123 44
Q ss_pred EecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhh-hcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCc
Q 011567 174 LYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY-LSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKL 245 (483)
Q Consensus 174 ~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~-~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~ 245 (483)
+.+++++++..++.+++.+||.|+++.++++.....+. ..|.+++.++.+ |++.+|+.+++..+. ..+
T Consensus 125 it~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~----~~~ 200 (447)
T PLN02607 125 LTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAA----NIR 200 (447)
T ss_pred EcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHh----CCC
Confidence 44556788888889999999999999999988776666 467777776532 677888887654321 223
Q ss_pred cEEEEEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCC-Cccccc---cCC-CCCceeEEEcccccc
Q 011567 246 RRYIVVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSG-RGLTEH---CGV-PVDKIDIVTAAMGHA 317 (483)
Q Consensus 246 ~~~iv~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G-~g~~~~---~~v-~~~~~Di~~~s~~K~ 317 (483)
++++++..++|++|.+.+ +++|+++|++||+.+|+||+|+..+++... ..+.+. .+. +..+.-+++.||||.
T Consensus 201 vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~ 280 (447)
T PLN02607 201 VRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKD 280 (447)
T ss_pred eeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhc
Confidence 566666677889999988 889999999999999999999876665311 111111 111 101234677899999
Q ss_pred ccCCC---ceeec-cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHH---Hhc-CcHHHHHHHHHHHHHHHhhccCCC
Q 011567 318 LATEG---GFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDV---LEE-NPDLITKLKKNTAILRTGLSDIHG 389 (483)
Q Consensus 318 lg~~G---G~i~~-~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~---l~~-~~~~~~~l~~~~~~l~~~L~~~~~ 389 (483)
||..| ||+++ ++++++.++... . |+. .+.....++.+.|+. .+. ..+.+++++++.+.+.+.|++. |
T Consensus 281 fg~~GlRvG~ivs~n~~l~~~~~~~~-~--~~~-~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-g 355 (447)
T PLN02607 281 LGLPGFRVGTIYSYNDKVVTTARRMS-S--FTL-VSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-G 355 (447)
T ss_pred CCCCcceEEEEEEcCHHHHHHHHHHh-h--cCC-CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 98777 99887 666766655432 1 221 123333333333321 111 1235667778888888899885 7
Q ss_pred ceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHH
Q 011567 390 LSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACE 469 (483)
Q Consensus 390 ~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~ 469 (483)
+++.....+.++++.++...... ......++.++++++.||.+.++.... +..++.+||+++. .++++++++++
T Consensus 356 i~~~~~~ag~fvw~~L~~~~~~~--~~~~e~~l~~~ll~~~gV~v~pG~~f~---~~~~g~fRi~fa~-~~~~~l~~gl~ 429 (447)
T PLN02607 356 IECLKGNAGLFCWMNLSPLLETP--TREGELALWDSILREVKLNISPGSSCH---CSEPGWFRVCFAN-MSEDTLEVALK 429 (447)
T ss_pred CCcccCCeeEEEEEEchHhhcCC--CchhHHHHHHHHHHhCCEEEcCccccC---CCCCCEEEEEecc-CCHHHHHHHHH
Confidence 77665556788888885311100 011123566677777799999875432 1124569999875 57899999999
Q ss_pred HHHHHHHHH
Q 011567 470 SLKRISAVV 478 (483)
Q Consensus 470 ~l~~~~~~~ 478 (483)
+|.+++.+-
T Consensus 430 Ri~~~l~~~ 438 (447)
T PLN02607 430 RIHRFMDRR 438 (447)
T ss_pred HHHHHHHHH
Confidence 999998754
No 249
>PLN02231 alanine transaminase
Probab=99.88 E-value=7.7e-20 Score=191.02 Aligned_cols=342 Identities=13% Similarity=0.129 Sum_probs=214.2
Q ss_pred hHHHHHHHHHHHhc-CCCCCCCCCcccChHHHHHHHHHHHhhh----CC----CCEEEecccHHHHHhhhhhhc-cCCcE
Q 011567 126 EKLLESCTSALEKY-GVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----PDSILYSYGLSTMFSAIPCFC-KKGDL 195 (483)
Q Consensus 126 p~i~~a~~~~l~~~-g~g~~~~~~~~g~~~~~~~l~~~La~~~----g~----e~~i~~~sG~~a~~~ai~~~~-~~gdi 195 (483)
..+++++.+.+... +... +.|+...-..+|++.+|+++ |. ++.++++++++++..++++++ .+||.
T Consensus 143 ~~~i~~a~~~l~~~~~~~~----~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~ 218 (534)
T PLN02231 143 ADAIERAWQILDQIPGRAT----GAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDG 218 (534)
T ss_pred HHHHHHHHHHHHhcCCccc----cCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCE
Confidence 46666666666652 2111 12333333455666666654 42 344555666788999999997 47999
Q ss_pred EEEcCCchhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC---hH
Q 011567 196 IVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP---LD 265 (483)
Q Consensus 196 I~~~~~~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~---L~ 265 (483)
|+++.+.|..+...+...|.+++.++.+ |+++|++.+++.... ..+++++++...+|++|.+.+ ++
T Consensus 219 Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~----~~~~k~ivl~nP~NPTG~vls~e~l~ 294 (534)
T PLN02231 219 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSK----GITVRALVVINPGNPTGQVLAEENQR 294 (534)
T ss_pred EEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhc----CCCeEEEEEeCCCCCCCcCCCHHHHH
Confidence 9999999999988899889888777532 678888887653221 112455555566889999988 78
Q ss_pred HHHHHHHHcCcEEEEeCccccccccCCCC--ccccc---cCCCCCc-eeEEEccccccc-c---CCCceeec---cHHHH
Q 011567 266 ELIRLKEKYRFRVFLDESNSFGVLGRSGR--GLTEH---CGVPVDK-IDIVTAAMGHAL-A---TEGGFCTG---SARVV 332 (483)
Q Consensus 266 ~l~~l~~k~~~~li~DEa~s~g~lg~~G~--g~~~~---~~v~~~~-~Di~~~s~~K~l-g---~~GG~i~~---~~~~~ 332 (483)
+|+++|++||++||+||+|...++..... .+.+. .+....+ .-++++|+||.+ | ..+||++. +++++
T Consensus 295 ~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~ 374 (534)
T PLN02231 295 DIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVR 374 (534)
T ss_pred HHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHH
Confidence 99999999999999999998766532111 11111 1111111 246789999976 4 34599865 67888
Q ss_pred HHHHhcCCceeecCCCcHHHHHHHHHHHH-----------HHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEE
Q 011567 333 DHQRLSSSGYVFSASLPPYLASAAITAID-----------VLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIV 401 (483)
Q Consensus 333 ~~~~~~~~~~~fs~~~~p~~~aaa~~al~-----------~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~ 401 (483)
+.+..... ..... +.....++..+++ ++++.+++++.++++.+.+.+.|++++|+.+..+.++.++
T Consensus 375 ~~l~k~~~-~~~~s--~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Ggfyl 451 (534)
T PLN02231 375 EQIYKVAS-VNLCS--NISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGAMYL 451 (534)
T ss_pred HHHHHHHh-hhcCC--ChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeeEE
Confidence 87654322 11111 2233333333331 1112224577889999999999998888888765556566
Q ss_pred EEEecCCCCCchhhH----HHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 402 FLILEKSTGSMKNDL----QLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 402 ~l~l~~~~~~~~~~~----~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
+..+.-+....+... .....++.+++++.||.+.++........ ...+|+++ ..++++++++++.|++++++
T Consensus 452 w~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g--~~~~Rit~--~~~~e~l~eal~RL~~~~~~ 527 (534)
T PLN02231 452 FPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPG--TWHFRCTI--LPQEDKIPAIVSRLTEFHKS 527 (534)
T ss_pred eccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCC--CCeEEEEe--CCCHHHHHHHHHHHHHHHHH
Confidence 644421110000000 00123556677778999998764321000 11399987 36899999999999999999
Q ss_pred HHhcC
Q 011567 478 VLRDR 482 (483)
Q Consensus 478 ~~~~~ 482 (483)
.++++
T Consensus 528 ~~~~~ 532 (534)
T PLN02231 528 FMDEF 532 (534)
T ss_pred HHHHh
Confidence 88764
No 250
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=1.4e-20 Score=188.38 Aligned_cols=306 Identities=14% Similarity=0.145 Sum_probs=204.5
Q ss_pred eEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEe-cccHHHHHhhh
Q 011567 110 EVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILY-SYGLSTMFSAI 186 (483)
Q Consensus 110 ~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~-~sG~~a~~~ai 186 (483)
..+++.+| |.+|.. +.+. ...+..|. .....+|++.+++++|.+ +.|++ +++++++..++
T Consensus 29 ~~~~l~~Nenp~~~~--~~~~---~~~~~~Yp------------~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~ 91 (351)
T PRK01688 29 GDVWLNANEYPTAVE--FQLT---QQTLNRYP------------ECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLI 91 (351)
T ss_pred CceEecCCCCCCCCC--hhhc---ccccccCC------------CCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHH
Confidence 35889888 777753 3321 11122221 112478999999999954 34544 55568888999
Q ss_pred hhhccCC-cEEEEcCCchhHHHhHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCC
Q 011567 187 PCFCKKG-DLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQ 260 (483)
Q Consensus 187 ~~~~~~g-diI~~~~~~h~s~~~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~ 260 (483)
+++.++| |.|++..+.|..+...++..|.+++.++.+ |++++++.+. .+++|++..++|++|.
T Consensus 92 ~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~~-----------~~~lv~l~nPnNPTG~ 160 (351)
T PRK01688 92 RAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAIADNLD-----------GVKVVYVCSPNNPTGN 160 (351)
T ss_pred HHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHHhcc-----------CCcEEEEeCCCCCCCC
Confidence 9999887 889999999988888888889988877643 4555555431 2567777788899999
Q ss_pred ccChHHHHHHHHHc--CcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHH
Q 011567 261 IAPLDELIRLKEKY--RFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQ 335 (483)
Q Consensus 261 i~~L~~l~~l~~k~--~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~ 335 (483)
+.+.+++.++++.. +.++|+||+|..+.... ........ .+.-+++.||||++|..| ||+++++++++.+
T Consensus 161 ~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~---s~~~~~~~--~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l 235 (351)
T PRK01688 161 LINPQDLRTLLELTRGKAIVVADEAYIEFCPQA---SLAGWLAE--YPHLVILRTLSKAFALAGLRCGFTLANEEVINLL 235 (351)
T ss_pred CCCHHHHHHHHHhCCCCcEEEEECchhhcCCCC---ChHHHHhh--CCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHH
Confidence 99976666665532 68999999997643211 11111111 122588899999999777 9999999999888
Q ss_pred HhcCCceeecCCCcHHHHHHHHHHHHH--HhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCch
Q 011567 336 RLSSSGYVFSASLPPYLASAAITAIDV--LEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMK 413 (483)
Q Consensus 336 ~~~~~~~~fs~~~~p~~~aaa~~al~~--l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~ 413 (483)
+....+| +.+....+++.++|+. .+...+.++.+.++.+++.+.|++++++....++.++++++.+.+
T Consensus 236 ~~~~~~~----~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~~------ 305 (351)
T PRK01688 236 LKVIAPY----PLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFTA------ 305 (351)
T ss_pred HhccCCC----CCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCC------
Confidence 7654443 2344445555555542 111234566777788899999988767653335578888877631
Q ss_pred hhHHHHHHHHHHHHHhCCEEEEeecc-cccccCCCCCceEEEccCCCCHHHHHHHHHHHH
Q 011567 414 NDLQLLEDIADWALKEDGVFVVTSKR-SMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 472 (483)
Q Consensus 414 ~~~~~~~~i~~~~l~~~Gv~v~~~~~-~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 472 (483)
..++.+.++ ++||.++.... +.. ++.+||++. +++|+++++++|+
T Consensus 306 -----~~~l~~~L~-~~gi~vr~~~~~~~~-----~~~iRis~~---~~~e~~~l~~al~ 351 (351)
T PRK01688 306 -----SSAVFKSLW-DQGIILRDQNKQPGL-----SNCLRITIG---TREECQRVIDALR 351 (351)
T ss_pred -----HHHHHHHHH-HCCeEEEECCCcCCC-----CCeEEEeCC---CHHHHHHHHHhhC
Confidence 235677655 46999986432 221 345999985 7899999998873
No 251
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=2.5e-20 Score=185.14 Aligned_cols=310 Identities=14% Similarity=0.129 Sum_probs=211.0
Q ss_pred ECCeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC---C-CCEEEe-cccH
Q 011567 106 ISGKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG---T-PDSILY-SYGL 179 (483)
Q Consensus 106 ~~G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g---~-e~~i~~-~sG~ 179 (483)
.+|+..+||..+ |.++ .+|.+.+++.+.+..-..+ .|.. +...+|++.++++++ . ++.++. +++.
T Consensus 16 ~~~~~~i~l~~~~~~~~--~p~~~~~~~~~~~~~~~~~------~Y~~-~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~ 86 (335)
T PRK14808 16 TEKRDRTYLALNENPFP--FPEDLVDEVFRRLNSDTLR------IYYD-SPDEELIEKILSYLDTDFLSKNNVSVGNGAD 86 (335)
T ss_pred CCCCceeEecCCCCCCC--CCHHHHHHHHHHhhhhhhh------cCCC-CChHHHHHHHHHHhCCCCCCcceEEEcCCHH
Confidence 467789999988 5554 4588999988876531111 1111 135789999999987 2 344555 5556
Q ss_pred HHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCC
Q 011567 180 STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSG 259 (483)
Q Consensus 180 ~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G 259 (483)
+++..++.++ |.|++..++|..+...++..|.+++.++..+--.+... .. . .+++|++...+|++|
T Consensus 87 ~~i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~--~~-~-------~~~~i~i~nP~NPTG 152 (335)
T PRK14808 87 EIIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEV--NV-G-------EGDVVFIPNPNNPTG 152 (335)
T ss_pred HHHHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChh--Hc-c-------CCCEEEEeCCCCCCC
Confidence 8888888887 55788889999999999999999988875321001000 01 1 246888888999999
Q ss_pred CccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHHH
Q 011567 260 QIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQR 336 (483)
Q Consensus 260 ~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~ 336 (483)
.+.+.+++.+++ ++++++|+||+|.... +. .......- .+.-++++||||++|..| ||+++++++++.+.
T Consensus 153 ~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~-~~---~~~~~~~~--~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~ 225 (335)
T PRK14808 153 HVFEREEIERIL-KTGAFVALDEAYYEFH-GE---SYVDLLKK--YENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYN 225 (335)
T ss_pred CCcCHHHHHHHH-hcCCEEEEECchhhhc-CC---chHHHHHh--CCCEEEEEechhhccCcccceEEEEeCHHHHHHHH
Confidence 999999999998 5899999999997642 21 11111111 123588899999999878 99999999999886
Q ss_pred hcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhH
Q 011567 337 LSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDL 416 (483)
Q Consensus 337 ~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~ 416 (483)
..... ++ .++....++.++++..+...+..+.++++.+.+.+.|++. |+.+.. +.++++++.++.. +
T Consensus 226 ~~~~~--~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~-~~g~f~~~~l~~~------~- 292 (335)
T PRK14808 226 RVRLP--FN--VSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYRITD-SRGNFVFIFMEKE------E- 292 (335)
T ss_pred HhcCC--CC--CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECC-CCCeEEEEeCCCc------c-
Confidence 54422 22 2444445555566533222345566777788888899886 777654 4788888887521 1
Q ss_pred HHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 417 QLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 417 ~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
..++.+. |.++||+++.. +..+||++. +.++.++++++|+++
T Consensus 293 --~~~~~~~-l~~~Gi~V~~~----------~~~~Risi~---~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 293 --KERLLEH-LRAKNIAVRSF----------REGVRITIG---KREENDMILKELEVF 334 (335)
T ss_pred --HHHHHHH-HHHCCeEEEEC----------CCCeEEecC---CHHHHHHHHHHHHhh
Confidence 1345665 44569999842 134999984 679999999988753
No 252
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.88 E-value=3e-20 Score=189.49 Aligned_cols=337 Identities=15% Similarity=0.145 Sum_probs=208.1
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh---CC-CCEEEeccc-HHHH
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL---GT-PDSILYSYG-LSTM 182 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~---g~-e~~i~~~sG-~~a~ 182 (483)
|+.++|+..++. .+...|.+.+++.+.+++..... .-..|+...-..+|++.+|+++ +. ++.|++++| .+++
T Consensus 32 ~~~~i~l~~~~~-~~~~~~~v~~~~~~~~~~~~~~~--~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al 108 (402)
T TIGR03542 32 SADIIRLGIGDT-TQPLPASVIEAFHNAVDELASEE--TFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDV 108 (402)
T ss_pred CCCeEEcCCCCC-CCCCCHHHHHHHHHHHhcccccc--cccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHH
Confidence 457899998743 22245788899888887632110 0011322233466778888765 32 244555545 5666
Q ss_pred HhhhhhhccCCcEEEEcCCchhHHHhHhhhcCC-----------eEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEE
Q 011567 183 FSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRS-----------TVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVV 251 (483)
Q Consensus 183 ~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~-----------~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~ 251 (483)
..+ ..+..+||.|+++.++|..+...++..|. ++..++..+-+.+...+.+. . ++++|++
T Consensus 109 ~~l-~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~-------~~~~i~l 179 (402)
T TIGR03542 109 FRL-QSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEE-P-------KIDIIYL 179 (402)
T ss_pred HHH-HHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCcccc-C-------CceEEEE
Confidence 654 45567899999999999888888888887 77766543111111111110 1 2456666
Q ss_pred ecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCC-CceeEEEccccccccCCC---ce
Q 011567 252 EAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPV-DKIDIVTAAMGHALATEG---GF 324 (483)
Q Consensus 252 e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~-~~~Di~~~s~~K~lg~~G---G~ 324 (483)
...++++|.+.+ +++|+++|++||+++|+||+|+....+.+ . ......++. .+..|+++||||.+|.+| ||
T Consensus 180 ~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~-~-~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~ 257 (402)
T TIGR03542 180 CSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPS-L-PHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGW 257 (402)
T ss_pred eCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCC-C-CcchhhCCCCcccEEEEecCccccCCCCcceEE
Confidence 678899999999 78999999999999999999986544321 1 111112221 233577899999998777 99
Q ss_pred eeccHHHH--------HHHHhcCCceeecCCCcHHHHHHHHHHHHH--HhcCcHHHHHHHHHHHHHHHhhccCCCceeec
Q 011567 325 CTGSARVV--------DHQRLSSSGYVFSASLPPYLASAAITAIDV--LEENPDLITKLKKNTAILRTGLSDIHGLSIAS 394 (483)
Q Consensus 325 i~~~~~~~--------~~~~~~~~~~~fs~~~~p~~~aaa~~al~~--l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~ 394 (483)
++++++++ +.+.... ...+. +.+++...++.+.++. .....+.++.++++.+.+.+.|++. ++.+..
T Consensus 258 ~i~~~~l~~~~~~~~~~~~~~~~-~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~ 334 (402)
T TIGR03542 258 TVVPKELTYADGHSVIQDWERRQ-CTKFN-GASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-GFKVYG 334 (402)
T ss_pred EEecHHHhhcchhhHHHHHHHHh-hhccc-CCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-CceecC
Confidence 99988776 2221111 11121 1234444444444421 1111234566778888888999875 776654
Q ss_pred CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 395 NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 395 ~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
+..++++++.++... + ..+++..++++.||.+.++...... .++.+||+.. .++++++++++.|+++
T Consensus 335 ~~~~~f~~v~l~~~~-----~---~~~l~~~l~~~~gv~v~pg~~f~~~---~~~~iRis~~--~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 335 GEHAPYLWVKTPEGI-----S---SWDFFDFLLYQYHVVGTPGSGFGPS---GEGFVRFSAF--GKRENIVEACERIKEA 401 (402)
T ss_pred CCceeEEEEECCCCC-----C---HHHHHHHHHHhCCEEEeCchhhCCC---CCCEEEEEec--CCHHHHHHHHHHHHhh
Confidence 446778888875321 1 2256777776679999887543211 1245999963 4789999999999875
No 253
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=6.5e-21 Score=192.12 Aligned_cols=212 Identities=15% Similarity=0.161 Sum_probs=165.0
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHh---hhcCCeEEEecCCCHHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL---YLSRSTVVYFKHNDMDSLRN 230 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~---~~s~~~v~~~~~~d~~~Le~ 230 (483)
+...+||+.+|+++|.++++++++|++|+..++.++.++||.|+++...|.++...+ ...+.++..+. .|++++++
T Consensus 53 p~~~~lE~~lA~l~g~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~-~d~~~l~~ 131 (385)
T PRK08574 53 PTLRPLEEALAKLEGGVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY-PSTEDIIE 131 (385)
T ss_pred ccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC-CCHHHHHH
Confidence 467889999999999999999999999999999999999999999999998876655 33466665553 46777777
Q ss_pred HHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEE
Q 011567 231 TLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIV 310 (483)
Q Consensus 231 ~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~ 310 (483)
.+++. ++++|++|.+++++|.+.|+++|+++|++||+++|+|++++.+... +++ . .++|++
T Consensus 132 ~i~~~---------~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~---~~l------~-~GaDiv 192 (385)
T PRK08574 132 AIKEG---------RTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLY---RPL------R-HGADFV 192 (385)
T ss_pred hcCcc---------CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC---Chh------h-hCCcEE
Confidence 66431 2678889999999999999999999999999999999999866432 222 1 234999
Q ss_pred EccccccccC----CCc-eeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhc
Q 011567 311 TAAMGHALAT----EGG-FCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLS 385 (483)
Q Consensus 311 ~~s~~K~lg~----~GG-~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~ 385 (483)
++|++|++++ .|| ++++++++.+.++.... .++..++|+.++.++..++.+. ...++..+++..+.+.|+
T Consensus 193 v~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~--~~g~~~~p~~a~l~l~~l~tL~---~R~~~~~~na~~la~~L~ 267 (385)
T PRK08574 193 VHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRR--RLGTIMQPFEAYLVLRGLKTLE---VRFERQCRNAMAIAEFLS 267 (385)
T ss_pred EeeCceeecCCCCceeEEEEECcHHHHHHHHHHHH--hcCCCCCHHHHHHHHcccCcHH---HHHHHHHHHHHHHHHHHH
Confidence 9999999974 367 55667777776653322 2456678888887777776654 467777888888889898
Q ss_pred cCCCc
Q 011567 386 DIHGL 390 (483)
Q Consensus 386 ~~~~~ 390 (483)
+.+.+
T Consensus 268 ~~p~v 272 (385)
T PRK08574 268 EHPKV 272 (385)
T ss_pred cCCCc
Confidence 76643
No 254
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.88 E-value=5.1e-20 Score=180.52 Aligned_cols=310 Identities=19% Similarity=0.297 Sum_probs=216.5
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhc-cCCcEEEEcCCchh
Q 011567 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFC-KKGDLIVADEGVHW 204 (483)
Q Consensus 126 p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~-~~gdiI~~~~~~h~ 204 (483)
.+..+++.+.++..-. .+.+...++|+.+++++|...++.++||+.|+..+++++. ++||.|+++..++.
T Consensus 15 ~~e~~~v~~vl~sg~i---------~~G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~Tfv 85 (374)
T COG0399 15 EEELAAVQEVLKSGWL---------TGGPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFV 85 (374)
T ss_pred hHHHHHHHHHHHcCCe---------ecChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchH
Confidence 4566777777776322 1235678999999999999999999999999999999665 99999999999999
Q ss_pred HHHhHhhhcCCeEEEecCC------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEE
Q 011567 205 GIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRV 278 (483)
Q Consensus 205 s~~~g~~~s~~~v~~~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~l 278 (483)
++.+++...|++++.++.+ |++.+|+.+.. ++++|+.-+.+ |..+++++|.++|++||+++
T Consensus 86 ATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~----------~tKAIipVhl~---G~~~dm~~i~~la~~~~l~v 152 (374)
T COG0399 86 ATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITP----------RTKAIIPVHLA---GQPCDMDAIMALAKRHGLPV 152 (374)
T ss_pred HHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHccc----------CCeEEEEehhc---cCCCCHHHHHHHHHHcCCeE
Confidence 9999999999998877643 78888888765 36788877777 88899999999999999999
Q ss_pred EEeCccccccccCCCCccccccCCCCCceeEEEccc--cccccC-CCceeecc-HHHHHHH---HhcCCc------e---
Q 011567 279 FLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAM--GHALAT-EGGFCTGS-ARVVDHQ---RLSSSG------Y--- 342 (483)
Q Consensus 279 i~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~--~K~lg~-~GG~i~~~-~~~~~~~---~~~~~~------~--- 342 (483)
|.|.+|++|..-+ |+.. ..+| |+-++|| .|.++. -||+++.+ +++.+.. +..+.. |
T Consensus 153 IEDaAqa~Ga~y~-gk~v-Gt~G------d~~~fSF~~~K~ittgEGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~ 224 (374)
T COG0399 153 IEDAAQAHGATYK-GKKV-GSFG------DIGAFSFHATKNLTTGEGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHE 224 (374)
T ss_pred EEEcchhccCeec-Cccc-cccc------ceEEEEecCCCCccccCceEEEeCCHHHHHHHHHHHHhCcCCCccccceee
Confidence 9999999886432 3321 1233 5666677 788864 48887665 4555543 333332 1
Q ss_pred --eecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCC-----CEEEEEecCCCCCchhh
Q 011567 343 --VFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPES-----PIVFLILEKSTGSMKND 415 (483)
Q Consensus 343 --~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~-----~i~~l~l~~~~~~~~~~ 415 (483)
-|..-++.+.+|.++..|+.+++ ..++-+++.+...+.|++++++.+...+.. ....+.+.+. + .
T Consensus 225 ~~G~N~rm~~iqAAigl~QL~~l~~---~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~-~-~--- 296 (374)
T COG0399 225 ELGYNYRLTEIQAAIGLAQLERLDE---INERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE-G-I--- 296 (374)
T ss_pred ecccccCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCC-C-C---
Confidence 12234778888888888887754 666777788888888888765544322222 2333444322 0 0
Q ss_pred HHHHHHHHHHHHHhCCEE----EEeecccc-ccc------CCCCC-------ceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 416 LQLLEDIADWALKEDGVF----VVTSKRSM-LDK------CRLPV-------GIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 416 ~~~~~~i~~~~l~~~Gv~----v~~~~~~~-~~~------~~~~~-------~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
.-..+.. .|++.||. ..|..... ..+ ...|. .|++.+...+|++|+++++++|++++.
T Consensus 297 --~R~~l~~-~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 297 --SRDALME-SLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred --CHHHHHH-HHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhc
Confidence 1113444 56777665 22211110 000 11222 388989999999999999999998875
No 255
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.88 E-value=9.6e-20 Score=184.41 Aligned_cols=316 Identities=17% Similarity=0.227 Sum_probs=212.2
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhh-ccCCcEEEEcCCchh
Q 011567 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF-CKKGDLIVADEGVHW 204 (483)
Q Consensus 126 p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~-~~~gdiI~~~~~~h~ 204 (483)
++-.+++.+.++... +...+...++|+.+++++|.+.++++++|++|+..++.++ .++||.|+++...|.
T Consensus 10 ~~~~~~v~~~~~~~~---------~~~g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~ 80 (380)
T TIGR03588 10 QDDIDAVVEVLKSDF---------LTQGPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFV 80 (380)
T ss_pred HHHHHHHHHHHhcCC---------ccCChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchH
Confidence 445677777776531 1123457889999999999999999999999999999998 789999999999999
Q ss_pred HHHhHhhhcCCeEEEecC------CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEE
Q 011567 205 GIQNGLYLSRSTVVYFKH------NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRV 278 (483)
Q Consensus 205 s~~~g~~~s~~~v~~~~~------~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~l 278 (483)
++...+...|.+++.++. .|++++++.+++... + ++++|++.+ ..|...|+++|.++|++||+++
T Consensus 81 ~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~-----~-~t~~v~~~~---~~G~~~~~~~i~~l~~~~~~~l 151 (380)
T TIGR03588 81 ATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKG-----K-LPKAIVPVD---FAGKSVDMQAIAALAKKHGLKI 151 (380)
T ss_pred HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccC-----C-CceEEEEeC---CCCccCCHHHHHHHHHHcCCEE
Confidence 988888888998887754 267888877753211 1 245555433 3588899999999999999999
Q ss_pred EEeCccccccccCCCCccccccCCCCCceeEEEcccc--cccc-CCCceeec-cHHHHHHHHh---cCC-----------
Q 011567 279 FLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMG--HALA-TEGGFCTG-SARVVDHQRL---SSS----------- 340 (483)
Q Consensus 279 i~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~--K~lg-~~GG~i~~-~~~~~~~~~~---~~~----------- 340 (483)
|+|++|++|.. -.|+ ..|.. .-.|+.+.|++ |.++ +.||+++. ++++.+.++. .+.
T Consensus 152 I~D~a~a~g~~-~~~~----~~g~~-~~~d~~~~S~~~~K~~~~~~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 225 (380)
T TIGR03588 152 IEDASHALGAE-YGGK----PVGNC-RYADATVFSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQD 225 (380)
T ss_pred EEECCCcccCc-cCCE----eCCCc-cccceEEEecCCCCcccccCceEEEECCHHHHHHHHHHHHCCCCCCcccccccc
Confidence 99999998743 1121 12220 12288888886 8886 46777654 5666655432 110
Q ss_pred --cee-------ecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCC----C-CEEEEEec
Q 011567 341 --GYV-------FSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPE----S-PIVFLILE 406 (483)
Q Consensus 341 --~~~-------fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~----~-~i~~l~l~ 406 (483)
.+. +...++.+.++.++..|+.+ ++..++-+++.+++++.|.+++++.+...+. + .+..+.+.
T Consensus 226 ~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l---~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~ 302 (380)
T TIGR03588 226 EGPWYYEQQELGFNYRMTDIQAALGLSQLKKL---DRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLD 302 (380)
T ss_pred cCcceeeeeccccccCccHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEEC
Confidence 011 12235677777777666655 4577888999999999999887665432211 1 23333443
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc---------ccCCCC-------CceEEEccCCCCHHHHHHHHHH
Q 011567 407 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML---------DKCRLP-------VGIRLFVSAAHSEADLVKACES 470 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~---------~~~~~~-------~~lRi~~~~~~t~edi~~~~~~ 470 (483)
...+ . ...++.+. |+++||.++....+.. .....| ..|++.++..+|++|+++++++
T Consensus 303 ~~~~-~-----~r~~l~~~-L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~ 375 (380)
T TIGR03588 303 QEFG-C-----TRKEVFEA-LRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVET 375 (380)
T ss_pred CcCC-C-----CHHHHHHH-HHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHH
Confidence 2111 0 12245554 5667998864432211 011112 2388989999999999999999
Q ss_pred HHHHH
Q 011567 471 LKRIS 475 (483)
Q Consensus 471 l~~~~ 475 (483)
|++++
T Consensus 376 l~~~~ 380 (380)
T TIGR03588 376 LRKVL 380 (380)
T ss_pred HHHhC
Confidence 98763
No 256
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.88 E-value=2.4e-20 Score=189.23 Aligned_cols=214 Identities=15% Similarity=0.173 Sum_probs=168.4
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHH----hHhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~----~g~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+||++++++.|.+.++++++|++|+..++.++.++||.|+++...|.... ..+...|.++..++..|+++++
T Consensus 65 p~~~~le~~lA~l~g~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~ 144 (403)
T PRK07503 65 PTLALLEQRMASLEGGEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAALK 144 (403)
T ss_pred chHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHHHH
Confidence 467899999999999999999999999999999999999999999988776543 3455678888888888888888
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.++. ++++|++|.+.+++|.+.|+++|.++|++||+++|+|++|+.+..+ +. .+ ...|+
T Consensus 145 ~~i~~----------~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~---~~----l~---~g~Di 204 (403)
T PRK07503 145 AAISD----------KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQ---RP----LE---LGADL 204 (403)
T ss_pred HhcCc----------cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC---Cc----hh---hCCCE
Confidence 77643 2678889999999999999999999999999999999999865432 11 11 23489
Q ss_pred EEccccccccCC----CceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhc
Q 011567 310 VTAAMGHALATE----GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLS 385 (483)
Q Consensus 310 ~~~s~~K~lg~~----GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~ 385 (483)
+++|++|.+++. ||++++++++.+.++........+..++|+.++.++..|+.+. ...++..++...+.+.|+
T Consensus 205 ~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~tl~---~r~~~~~~na~~~a~~L~ 281 (403)
T PRK07503 205 VVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKTLA---LRMDRHCASAQAVAEWLA 281 (403)
T ss_pred EEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcchHH---HHHHHHHHHHHHHHHHHH
Confidence 999999999853 5888888888887764322223345678998888877776653 356666788888888888
Q ss_pred cCCCc
Q 011567 386 DIHGL 390 (483)
Q Consensus 386 ~~~~~ 390 (483)
+.+.+
T Consensus 282 ~~p~v 286 (403)
T PRK07503 282 RHPAV 286 (403)
T ss_pred hCCCc
Confidence 76544
No 257
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.88 E-value=1.7e-20 Score=191.36 Aligned_cols=329 Identities=13% Similarity=0.094 Sum_probs=207.8
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC-------CCCEEE---eccc
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG-------TPDSIL---YSYG 178 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g-------~e~~i~---~~sG 178 (483)
+..+|++.+.+-...+++.+.+++.+++++.-. .+.-..|+...-..+|++.+++++. .++.++ +.+|
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~--~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~ 106 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAE--KNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSG 106 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhcc--ccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCc
Confidence 467899887543333344555666665533110 0000123333334567777777652 123344 4555
Q ss_pred HHHHHhhh---hhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC---C----CHHHHHHHHHHhhhhhhhccCccEE
Q 011567 179 LSTMFSAI---PCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH---N----DMDSLRNTLERVTADNKRAKKLRRY 248 (483)
Q Consensus 179 ~~a~~~ai---~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~---~----d~~~Le~~l~~~~~~~~~~~~~~~~ 248 (483)
.+|+..++ .+++++||.|++++++|..+...++..|.+++.++. + |++.+++.+++... ++++
T Consensus 107 ~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~-------~~~~ 179 (404)
T PTZ00376 107 TGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPN-------GSVV 179 (404)
T ss_pred chHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCC-------CCEE
Confidence 66666554 577899999999999999999999999999988875 2 57777777754322 2567
Q ss_pred EEEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCC---CCccccccCCCCCceeEEEccccccccCCC
Q 011567 249 IVVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRS---GRGLTEHCGVPVDKIDIVTAAMGHALATEG 322 (483)
Q Consensus 249 iv~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~---G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G 322 (483)
+++...+|+||.+.+ +++|+++|++|++++|+||+|....++.. ...+...... .+.-|+++||||+++..|
T Consensus 180 ~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~--~~~vi~i~SfSK~~~~~G 257 (404)
T PTZ00376 180 LLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAER--GVEFLVAQSFSKNMGLYG 257 (404)
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhc--CCcEEEEEeCCCcccccc
Confidence 888889999999988 78889999999999999999976544210 0001111111 112588899999999666
Q ss_pred ---cee---eccHHHHHHHHhcC---CceeecCCCcHHHHHHHHHHHHHH-------hcCcHHHHHHHHHHHHHHHhhcc
Q 011567 323 ---GFC---TGSARVVDHQRLSS---SGYVFSASLPPYLASAAITAIDVL-------EENPDLITKLKKNTAILRTGLSD 386 (483)
Q Consensus 323 ---G~i---~~~~~~~~~~~~~~---~~~~fs~~~~p~~~aaa~~al~~l-------~~~~~~~~~l~~~~~~l~~~L~~ 386 (483)
||+ ++++++++.+.... ....++ +.+++...++.++++.- +...+.+++++++.+.+.+.|++
T Consensus 258 lRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 336 (404)
T PTZ00376 258 ERIGALHIVCANKEEAANVLSQLKLIIRPMYS-SPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKA 336 (404)
T ss_pred cccceEEEEeCCHHHHHHHHHHHHHHHhhhcC-CCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 997 57877555432110 111222 22445555555555321 11123456778888999999987
Q ss_pred CC---CceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHH
Q 011567 387 IH---GLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEAD 463 (483)
Q Consensus 387 ~~---~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ed 463 (483)
.. ++.+..+..+.++++.+. .+++.+++++.||.+.++ + |++++. .++++
T Consensus 337 ~~~~~~~~~~~p~gg~f~~~~~~-------------~~~~~~L~~~~~v~v~p~------------~-Ris~~~-~~~~~ 389 (404)
T PTZ00376 337 LGSPGDWEHIINQIGMFSFTGLT-------------KEQVERLIEKYHIYLLDN------------G-RISVAG-LTSKN 389 (404)
T ss_pred cCCCCcccccccCceEEEecCCC-------------HHHHHHHHHhCCEeecCC------------C-eEEEec-cCHHh
Confidence 62 133333334445555441 146777777779988653 2 898854 79999
Q ss_pred HHHHHHHHHHHHH
Q 011567 464 LVKACESLKRISA 476 (483)
Q Consensus 464 i~~~~~~l~~~~~ 476 (483)
+++++++|++++.
T Consensus 390 ~~~~~~~l~~~~~ 402 (404)
T PTZ00376 390 VDYVAEAIHDVVR 402 (404)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998865
No 258
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.87 E-value=1.8e-20 Score=189.03 Aligned_cols=212 Identities=16% Similarity=0.197 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHh----HhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~----g~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+|++.+++++|.+.+++++||++|+..++.++.++||.|++....|++... .+...|.++..++.+|+++++
T Consensus 54 p~~~~le~~la~l~g~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~ 133 (380)
T TIGR01325 54 PTVAAFEERIAALEGAERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAWE 133 (380)
T ss_pred chHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHHH
Confidence 5678999999999999999999999999999999999999999988887765432 344567888888888888887
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.++. ++++|++|.+.+++|.+.|+++|.++|++||+++|+|++++.+... .. .. ..+|+
T Consensus 134 ~~i~~----------~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~---~p----l~---~g~Di 193 (380)
T TIGR01325 134 AAVKP----------NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQ---QP----LK---LGADV 193 (380)
T ss_pred HhcCC----------CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC---Cc----hh---hCCCE
Confidence 66532 3689999999999999999999999999999999999999754322 11 11 23489
Q ss_pred EEccccccccCC----CceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhc
Q 011567 310 VTAAMGHALATE----GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLS 385 (483)
Q Consensus 310 ~~~s~~K~lg~~----GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~ 385 (483)
++.|++|.+++. ||++++++++++.++.... .++..++|..+..++..++.+. ...++..+++..+.+.|+
T Consensus 194 vv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~--~~g~~~~p~~a~~~l~~l~tl~---~r~~~~~~~a~~la~~L~ 268 (380)
T TIGR01325 194 VVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLR--HTGPAMSPFNAWVLLKGLETLS---LRMQKQFDSALAIAEWLQ 268 (380)
T ss_pred EEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHH--hhCCCCCHHHHHHHHhccCcHH---HHHHHHHHHHHHHHHHHH
Confidence 999999999743 5889998888777654321 2344567887777766666654 367777888888888888
Q ss_pred cCCCc
Q 011567 386 DIHGL 390 (483)
Q Consensus 386 ~~~~~ 390 (483)
+.+++
T Consensus 269 ~~p~v 273 (380)
T TIGR01325 269 AQPQV 273 (380)
T ss_pred cCCCc
Confidence 77643
No 259
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.87 E-value=1.9e-20 Score=189.77 Aligned_cols=212 Identities=13% Similarity=0.144 Sum_probs=165.7
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHh----hhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL----YLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~----~~s~~~v~~~~~~d~~~Le 229 (483)
+...+||++||+++|.+.++++++|++|+..++.++.++||.|++....|.++...+ ...|.++..++..|+++++
T Consensus 65 p~~~~Le~~lA~l~G~~~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~ 144 (398)
T PRK07504 65 PTVDMFEKRMCALEGAEDARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDNWE 144 (398)
T ss_pred chHHHHHHHHHHHhCCCeeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHHHH
Confidence 457899999999999999999999999999888888999999999888877654332 3457788888877888888
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.++. ++++|+++.+.+++|.+.|+++|.++|+++|+++|+||+|+.+.... . .. ..+|+
T Consensus 145 ~ai~~----------~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~---~----~~---~gaDi 204 (398)
T PRK07504 145 KAVRP----------NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQK---P----LE---LGAHI 204 (398)
T ss_pred HhcCc----------CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccCC---c----hh---hCCCE
Confidence 77642 37899999999999999999999999999999999999998664321 1 11 13489
Q ss_pred EEccccccccC----CCceeeccHHHHHH-HHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 310 VTAAMGHALAT----EGGFCTGSARVVDH-QRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 310 ~~~s~~K~lg~----~GG~i~~~~~~~~~-~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
++.|++|++++ .||+++++++.++. ++... ...+..++|..++.++..++.+. ...++..+++..+.+.|
T Consensus 205 vv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~--~~~g~~~s~~~A~~~l~~L~tl~---~R~~~~~~na~~la~~L 279 (398)
T PRK07504 205 VVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYF--RHTGPSLSPFNAWTLLKGLETLP---VRVRQQTESAAAIADFL 279 (398)
T ss_pred EEeeccccccCCccceEEEEEeCcHHHHHHHHHHH--HHhCCCCCHHHHHHHHhccchHH---HHHHHHHHHHHHHHHHH
Confidence 99999999974 35788888776542 22110 11234578999998888887764 46777788999999999
Q ss_pred ccCCCc
Q 011567 385 SDIHGL 390 (483)
Q Consensus 385 ~~~~~~ 390 (483)
++.+++
T Consensus 280 ~~~p~v 285 (398)
T PRK07504 280 AGHPKV 285 (398)
T ss_pred HcCCCc
Confidence 887654
No 260
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.87 E-value=2.5e-20 Score=186.87 Aligned_cols=286 Identities=19% Similarity=0.242 Sum_probs=195.1
Q ss_pred CChHHHHHHHHHHHhcCCCCCCCCC-ccc--ChHHHHHHHHHHHhhhCCC-CEEEe-cccHHHHHhhhhhhc----cCC-
Q 011567 124 GHEKLLESCTSALEKYGVGSCGPRG-FYG--TIDVHLDCEARIAKFLGTP-DSILY-SYGLSTMFSAIPCFC----KKG- 193 (483)
Q Consensus 124 ~~p~i~~a~~~~l~~~g~g~~~~~~-~~g--~~~~~~~l~~~La~~~g~e-~~i~~-~sG~~a~~~ai~~~~----~~g- 193 (483)
.++.+.+++.+.++... +..+.+. .++ ..+...++++++++++|.+ +.+++ +++++++..++.++. ++|
T Consensus 10 ~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~ 88 (353)
T TIGR03235 10 IDPAVAEAMLPWLLEEF-GNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGK 88 (353)
T ss_pred CCHHHHHHHHHHHHhcC-CCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCC
Confidence 56889999988886521 2222211 112 2256789999999999975 44555 556788888888775 245
Q ss_pred cEEEEcCCchhHHHhHh---hhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChH
Q 011567 194 DLIVADEGVHWGIQNGL---YLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLD 265 (483)
Q Consensus 194 diI~~~~~~h~s~~~g~---~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~ 265 (483)
+.|+++...|.++.... ...|.+++.++.+ |++++++.+++ .+++|+++++++++|.+.|++
T Consensus 89 ~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~----------~~~lv~~~~~~n~tG~~~~~~ 158 (353)
T TIGR03235 89 KHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIRP----------DTLLVSIMHVNNETGSIQPIR 158 (353)
T ss_pred CeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCCC----------CCEEEEEEcccCCceeccCHH
Confidence 78999998898876553 3357777776642 67777766532 268898999999999999999
Q ss_pred HHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccHHHHHHHHhcC----C
Q 011567 266 ELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSS----S 340 (483)
Q Consensus 266 ~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~~~~~~~~~~~----~ 340 (483)
+|.++|++||+++++|+++++|... +++...++|++++|.+|++|+.| |+++.+++..+..+... .
T Consensus 159 ~I~~l~~~~~~~~ivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~g~g~l~~~~~~~~~~~~~~~~~~~ 229 (353)
T TIGR03235 159 EIAEVLEAHEAFFHVDAAQVVGKIT---------VDLSADRIDLISCSGHKIYGPKGIGALVIRKRGKPKAPLKPIMFGG 229 (353)
T ss_pred HHHHHHHHcCCEEEEEchhhcCCcc---------ccccccCCCEEEeehhhcCCCCceEEEEEccCcccccccCceeeCC
Confidence 9999999999999999999977542 23433457999999999988765 78777766432211110 0
Q ss_pred c---eeecCCCcHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHhhccCCCceeecCCC---CCEEEEEecCCCCCch
Q 011567 341 G---YVFSASLPPYLASAAITAIDVLEEN-PDLITKLKKNTAILRTGLSDIHGLSIASNPE---SPIVFLILEKSTGSMK 413 (483)
Q Consensus 341 ~---~~fs~~~~p~~~aaa~~al~~l~~~-~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~---~~i~~l~l~~~~~~~~ 413 (483)
+ ....++.|+....+..++++.+.+. ++..++++++.+++++.|++ +|+++..++. ..++.+.++..
T Consensus 230 ~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~~~----- 303 (353)
T TIGR03235 230 GQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSIDGV----- 303 (353)
T ss_pred CCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeCCc-----
Confidence 0 0112345666666777788877643 46788999999999999988 6988764322 33566655321
Q ss_pred hhHHHHHHHHHHHHHhCCEEEEeecccc
Q 011567 414 NDLQLLEDIADWALKEDGVFVVTSKRSM 441 (483)
Q Consensus 414 ~~~~~~~~i~~~~l~~~Gv~v~~~~~~~ 441 (483)
+ ..++... |++ +|.++++..+.
T Consensus 304 -~---~~~v~~~-L~~-~i~v~~g~~~~ 325 (353)
T TIGR03235 304 -N---SEALIVN-LRA-DAAVSTGSACS 325 (353)
T ss_pred -C---HHHHHHH-HhC-CeEEEchhhcC
Confidence 1 2245554 565 89998765543
No 261
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.87 E-value=4.6e-20 Score=186.91 Aligned_cols=213 Identities=16% Similarity=0.178 Sum_probs=168.7
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHH----hHhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~----~g~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+||++||++.|.++++++++|++|+..++.++.++||.|+++...|+... ..+...|.++..++.+|+++++
T Consensus 70 p~~~~le~~lA~l~g~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~ 149 (403)
T PRK07810 70 PTVSMFEERLRLIEGAEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQWE 149 (403)
T ss_pred chHHHHHHHHHHHhCCCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHHHH
Confidence 447899999999999999999999999999999999999999998886664433 3455678899999998999998
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+++ ++++|++|.+.+++|.+.|+++|+++|+++|+++|+|++|+.+... +++ . ..+|+
T Consensus 150 ~ai~~----------~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~---~~~------~-~gaDi 209 (403)
T PRK07810 150 EALSV----------PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQ---RGL------P-LGADV 209 (403)
T ss_pred HhcCc----------CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccC---Chh------h-cCCcE
Confidence 87753 2689999999999999999999999999999999999999866543 221 1 23599
Q ss_pred EEccccccccCC----CceeeccHHHHHH-HHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 310 VTAAMGHALATE----GGFCTGSARVVDH-QRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 310 ~~~s~~K~lg~~----GG~i~~~~~~~~~-~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
++.|++|.+++. ||+++++++.+.. ++... ...+..++|..++.++..|+.+. .+.++..+++..+.+.|
T Consensus 210 vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~--~~~g~~~s~~~a~l~l~~L~tl~---~R~~~~~~~a~~~a~~L 284 (403)
T PRK07810 210 VVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLM--RHTGPALSAFNAWVLLKGLETLA---LRVRHSNASALRIAEFL 284 (403)
T ss_pred EEccCCceecCCcCceeEEEEeChHHHHHHHHHHH--HHhCCCCCHHHHHHHHhccCcHH---HHHHHHHHHHHHHHHHH
Confidence 999999999742 6888888775542 32111 12234578998888888777664 47888888988999999
Q ss_pred ccCCCce
Q 011567 385 SDIHGLS 391 (483)
Q Consensus 385 ~~~~~~~ 391 (483)
++.+++.
T Consensus 285 ~~~p~v~ 291 (403)
T PRK07810 285 EGHPAVR 291 (403)
T ss_pred hcCCCcc
Confidence 8876543
No 262
>PRK07908 hypothetical protein; Provisional
Probab=99.87 E-value=1.5e-19 Score=180.93 Aligned_cols=316 Identities=16% Similarity=0.172 Sum_probs=209.1
Q ss_pred CeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEe-cccHHHHHh
Q 011567 108 GKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILY-SYGLSTMFS 184 (483)
Q Consensus 108 G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~-~sG~~a~~~ 184 (483)
++.++||..+ |.++ .++.+.+++.+.+.... .|+...-..++++.++++++.+ +.|++ +++++++..
T Consensus 21 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~--------~Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~ 90 (349)
T PRK07908 21 GPGLLDFAVNVRHDT--PPEWLRERLAARLGDLA--------AYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFAL 90 (349)
T ss_pred CCCeEEecCCCCCCC--CCHHHHHHHHHHhhHhh--------cCCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHH
Confidence 5679999997 4443 45789999988876531 1222233578999999999853 44555 555688877
Q ss_pred hhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCC-H-HHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCcc
Q 011567 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHND-M-DSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIA 262 (483)
Q Consensus 185 ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d-~-~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~ 262 (483)
+++ + +++++++ ..+.+......++..|.+++.++.++ . -+++ .++ . .++++++..+++++|.+.
T Consensus 91 ~~~-l-~~~~viv-~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~-~l~---~-------~~~~i~l~np~NPTG~~~ 156 (349)
T PRK07908 91 LAR-L-RPRRAAV-VHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPA-AVP---D-------DADLVVIGNPTNPTSVLH 156 (349)
T ss_pred HHh-c-CCCeEEE-eCCCChHHHHHHHHcCCEEEeeccCcccCcChh-Hhc---c-------CCCEEEEcCCCCCCCCCc
Confidence 777 4 5666554 56777777777888899888876542 1 0112 111 1 255777777789999999
Q ss_pred ChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHHHhcC
Q 011567 263 PLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSS 339 (483)
Q Consensus 263 ~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~~~~ 339 (483)
|.++|.++|++ +.++|+||+|+....+. -..+.. ...+ ..++++|+||.+|..| ||+++++++++.++...
T Consensus 157 ~~~~l~~l~~~-~~~iIvDe~y~~~~~~~-~~~l~~---~~~~-~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~ 230 (349)
T PRK07908 157 PAEQLLALRRP-GRILVVDEAFADAVPGE-PESLAG---DDLP-GVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGR 230 (349)
T ss_pred CHHHHHHHHhc-CCEEEEECcchhhccCC-cccccc---ccCC-CEEEEeecccccCCccceeeeeecCHHHHHHHHhcC
Confidence 99999999975 77888999998643222 111111 1212 2578889999998666 99999999988876543
Q ss_pred CceeecCCCcHHHHHHHHHHHH--HHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHH
Q 011567 340 SGYVFSASLPPYLASAAITAID--VLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQ 417 (483)
Q Consensus 340 ~~~~fs~~~~p~~~aaa~~al~--~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~ 417 (483)
..+ + .++...+++.+.++ ......+.+++++++.+++.+.|++. ++++..++.++++++.+++
T Consensus 231 ~~~--~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~~~~~~~~~---------- 295 (349)
T PRK07908 231 AHW--P--VGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARVVDPAAAPFVLVRVPD---------- 295 (349)
T ss_pred CCC--C--ccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCceEEEEECCc----------
Confidence 332 2 23333333333332 11112346777888888999999887 8887765678888888742
Q ss_pred HHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 418 LLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 418 ~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
...+.+ .|+++||.+.++..... ..+..+||++ .+++|+++++++|++++.
T Consensus 296 -~~~~~~-~l~~~gI~v~~g~~f~~---~~~~~vRis~---~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 296 -AELLRK-RLRERGIAVRRGDTFPG---LDPDYLRLAV---RPRAEVPVLVQALAEILK 346 (349)
T ss_pred -HHHHHH-HHHhCCEEEEECCCCCC---CCCCeEEEEe---CCCccHHHHHHHHHHHHh
Confidence 123444 45667999987653211 0134699999 478999999999988754
No 263
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.87 E-value=2.4e-19 Score=180.20 Aligned_cols=308 Identities=17% Similarity=0.247 Sum_probs=209.5
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhc-cCCcEEEEcCCchh
Q 011567 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFC-KKGDLIVADEGVHW 204 (483)
Q Consensus 126 p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~-~~gdiI~~~~~~h~ 204 (483)
.+..+++.+.++.-.. ....+...++|+++++++|.+.++.++||+.|+..++.++- ++||.|+++...+.
T Consensus 5 ~e~~~~v~~~l~s~~~--------~~~g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~ 76 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWL--------STYGPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFP 76 (363)
T ss_dssp HHHHHHHHHHHHHTCC--------SSSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-T
T ss_pred HHHHHHHHHHHHhCCc--------cCCCHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcch
Confidence 3556677777776311 11147789999999999999999999999999999999874 78999999999999
Q ss_pred HHHhHhhhcCCeEEEecCC------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEE
Q 011567 205 GIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRV 278 (483)
Q Consensus 205 s~~~g~~~s~~~v~~~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~l 278 (483)
++..++...|.+++.++.+ |++++++.+.+ .+++|++.+.+ |..+++++|.++|+++|+.|
T Consensus 77 ~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~----------~t~ai~~~h~~---G~~~d~~~i~~~~~~~~i~l 143 (363)
T PF01041_consen 77 ATASAILWAGAEPVFVDIDPETLNIDPEALEKAITP----------KTKAILVVHLF---GNPADMDAIRAIARKHGIPL 143 (363)
T ss_dssp HHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHT----------TEEEEEEE-GG---GB---HHHHHHHHHHTT-EE
T ss_pred HHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhcc----------CccEEEEecCC---CCcccHHHHHHHHHHcCCcE
Confidence 9999999999999888754 78888888765 36788887776 88889999999999999999
Q ss_pred EEeCccccccccCCCCccccccCCCCCceeEEEccc--ccccc-CCCceeecc-HHHHHHHH---hcCCc----------
Q 011567 279 FLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAM--GHALA-TEGGFCTGS-ARVVDHQR---LSSSG---------- 341 (483)
Q Consensus 279 i~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~--~K~lg-~~GG~i~~~-~~~~~~~~---~~~~~---------- 341 (483)
|.|.+|++|..- .|+.. ..+| |+.+.|| +|.+. +.||+++.+ +++.+.++ ..+..
T Consensus 144 IeD~a~a~g~~~-~g~~~-G~~g------d~~~fSf~~~K~i~~geGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 215 (363)
T PF01041_consen 144 IEDAAQAFGARY-KGRPV-GSFG------DIAIFSFHPTKIITTGEGGAVVTNDPELAERARALRNHGRSRDAFRRYRHE 215 (363)
T ss_dssp EEE-TTTTT-EE-TTEET-TSSS------SEEEEESSTTSSS-SSS-EEEEESTHHHHHHHHHHTBTTEETSECSTTEES
T ss_pred EEccccccCcee-CCEec-cCCC------CceEecCCCCCCCcCCCCeeEEecHHHHHHHhhhhhccCcCcccccccccc
Confidence 999999987532 12211 1122 7778888 58885 457887665 45555443 22211
Q ss_pred --eeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCC------CCEEEEEecCCCCCch
Q 011567 342 --YVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPE------SPIVFLILEKSTGSMK 413 (483)
Q Consensus 342 --~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~------~~i~~l~l~~~~~~~~ 413 (483)
+.+...++++.++.++..|+.++ +..++-+++.+.+++.|.+++++.....+. ...+.+.+++... .
T Consensus 216 ~~~g~n~rm~~~~AAigl~QL~~L~---~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~-~- 290 (363)
T PF01041_consen 216 LPPGYNFRMSELQAAIGLAQLKRLD---EIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEAL-A- 290 (363)
T ss_dssp SSS--B-B-BHHHHHHHHHHHHTHH---HHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGC-S-
T ss_pred ccCCcccccHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccc-c-
Confidence 12333578999998988888775 467777889999999999988764432211 2245666654321 0
Q ss_pred hhHHHHHHHHHHHHHhCCEEEEeecccccc------cC------CCCC-------ceEEEccCCCCHHHHHHHHHHHH
Q 011567 414 NDLQLLEDIADWALKEDGVFVVTSKRSMLD------KC------RLPV-------GIRLFVSAAHSEADLVKACESLK 472 (483)
Q Consensus 414 ~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~------~~------~~~~-------~lRi~~~~~~t~edi~~~~~~l~ 472 (483)
...++.+. |++.||.+.+.....+. .. ..|. .|.+.++..+|++|+++++++|+
T Consensus 291 ----~rd~l~~~-L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 291 ----DRDELVEA-LRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp ----THHHHHHH-HHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred ----hHHHHHHH-HHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 12245664 56679999876531221 00 1121 28899999999999999999885
No 264
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=2e-19 Score=180.91 Aligned_cols=285 Identities=14% Similarity=0.146 Sum_probs=193.7
Q ss_pred HHHHHHHHHhhhCCC-CEEEe-cccHHHHHhhhhhhccCC-cEEEEcCCchhHHHhHhhhcCCeEEEecCCC----H-HH
Q 011567 156 HLDCEARIAKFLGTP-DSILY-SYGLSTMFSAIPCFCKKG-DLIVADEGVHWGIQNGLYLSRSTVVYFKHND----M-DS 227 (483)
Q Consensus 156 ~~~l~~~La~~~g~e-~~i~~-~sG~~a~~~ai~~~~~~g-diI~~~~~~h~s~~~g~~~s~~~v~~~~~~d----~-~~ 227 (483)
..+|++.||+++|.+ +.|++ +++++++..++.+++.+| |.|+++.+++..+....+..|.+++.++..+ + .+
T Consensus 61 ~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 140 (364)
T PRK04781 61 PPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHAD 140 (364)
T ss_pred HHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcC
Confidence 478999999999854 34555 555688889999999888 7899988888777777788899988887521 1 12
Q ss_pred HHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHH--cCcEEEEeCccccccccCCCCccccccCCCCC
Q 011567 228 LRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEK--YRFRVFLDESNSFGVLGRSGRGLTEHCGVPVD 305 (483)
Q Consensus 228 Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k--~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~ 305 (483)
++++++..... ++++|++..+++++|.+.+.+++.++++. +++++|+||+|....... ......+. .
T Consensus 141 ~~~l~~~~~~~------~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~---~~~~~~~~--~ 209 (364)
T PRK04781 141 VPAIVAAALAS------NAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVP---SAVGLLAR--Y 209 (364)
T ss_pred HHHHHHHHhcc------CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCc---chHHHHhh--C
Confidence 34433322111 25677777888999999998777777764 478999999998654221 11111121 2
Q ss_pred ceeEEEccccccccCCC---ceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHH--hcCcHHHHHHHHHHHHH
Q 011567 306 KIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL--EENPDLITKLKKNTAIL 380 (483)
Q Consensus 306 ~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l--~~~~~~~~~l~~~~~~l 380 (483)
+.-|+++||||++|.+| ||+++++++++.++.....+ + .+.....++.++++.- ....+..++++++.+.+
T Consensus 210 ~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~~--~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l 285 (364)
T PRK04781 210 DNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPY--P--VPTPCAALAEQALSAPALAVTARRVAEVRAERERL 285 (364)
T ss_pred CCEEEEecChhhcccccceeeeeeCCHHHHHHHHhccCCC--C--CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 23588899999998777 99999999999887654433 2 3444444454555321 11123455677888899
Q ss_pred HHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecc-cccccCCCCCceEEEccCCC
Q 011567 381 RTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKR-SMLDKCRLPVGIRLFVSAAH 459 (483)
Q Consensus 381 ~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~-~~~~~~~~~~~lRi~~~~~~ 459 (483)
.+.|++++++....++.++++++.+++ ..++.+. +.++||.+.+... +.. +..+||++.
T Consensus 286 ~~~L~~~~~~~~~~p~~g~f~~~~~~~-----------~~~~~~~-l~~~gI~v~~~~~~~~~-----~~~~Ris~~--- 345 (364)
T PRK04781 286 HAALAQLPGVRRVYPSQGNFLLVRFDD-----------AEAAFQA-LLAAGVVVRDQRAAPRL-----SDALRITLG--- 345 (364)
T ss_pred HHHHHhCCCCCeECCCCCcEEEEEcCC-----------HHHHHHH-HHHCCeEEeeCCCCCCC-----CCeEEEeCC---
Confidence 999988767642335578888888731 1245555 4567999987642 221 345999985
Q ss_pred CHHHHHHHHHHHHHHH
Q 011567 460 SEADLVKACESLKRIS 475 (483)
Q Consensus 460 t~edi~~~~~~l~~~~ 475 (483)
++++.++++++|+++.
T Consensus 346 ~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 346 TPEQNDRVLAALQRTQ 361 (364)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 7899999999998764
No 265
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=1.5e-19 Score=181.31 Aligned_cols=307 Identities=16% Similarity=0.146 Sum_probs=203.7
Q ss_pred CeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEe-cccHHHHHh
Q 011567 108 GKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILY-SYGLSTMFS 184 (483)
Q Consensus 108 G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~-~sG~~a~~~ 184 (483)
++..+++.+| |.+|.. +.+ ....+..|. ... ..+|++.+|+++|.+ +.|++ +++++++..
T Consensus 30 ~~~~~~l~~ne~~~~~~--~~~---~~~~~~~Yp-----------~~~-~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~ 92 (354)
T PRK04635 30 GRGDIWINANESPFNNE--YKL---DLARLNRYP-----------ECQ-PPELINAYSAYAGVAPEQILTSRGADEAIEL 92 (354)
T ss_pred CCCcEEeeCCCCCCCCC--hhh---hhHHhccCC-----------CCC-HHHHHHHHHHHhCcCHHHEEEeCCHHHHHHH
Confidence 3456888887 666653 222 112233332 222 578999999999854 44555 555688999
Q ss_pred hhhhhccCC-cEEEEcCCchhHHHhHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCC
Q 011567 185 AIPCFCKKG-DLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNS 258 (483)
Q Consensus 185 ai~~~~~~g-diI~~~~~~h~s~~~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~ 258 (483)
++.+++++| |.|++..+.+..+...++..|.+++.++.+ |++.++ .. . ++++|++..++|++
T Consensus 93 ~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~----~~-~-------~~~li~i~nP~NPT 160 (354)
T PRK04635 93 LIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYIE----QL-D-------GAKLVFICNPNNPT 160 (354)
T ss_pred HHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHH----hc-c-------CCCEEEEeCCCCCC
Confidence 999999988 889999999888777778889988887753 333343 11 1 25677777889999
Q ss_pred CCccChHHHHHHHHHc-CcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHH
Q 011567 259 GQIAPLDELIRLKEKY-RFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDH 334 (483)
Q Consensus 259 G~i~~L~~l~~l~~k~-~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~ 334 (483)
|.+.|.+++.++++.. ++++|+||+|..+... ......... .+.-+++.||||++|.+| ||+++++++++.
T Consensus 161 G~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~---~s~~~~~~~--~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~ 235 (354)
T PRK04635 161 GTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPE---YSVADLLAS--YPNLVVLRTLSKAFALAGARCGFTLANEELIEI 235 (354)
T ss_pred CccCCHHHHHHHHHhCCCcEEEEeCchHhhccC---cchHHHHhh--CCCEEEEechHHHhhhhHHHHhhhhCCHHHHHH
Confidence 9999999999988874 7999999999754321 111111111 122477899999998777 999999999988
Q ss_pred HHhcCCceeecCCCcHHHHHHHHHHHHH--HhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCc
Q 011567 335 QRLSSSGYVFSASLPPYLASAAITAIDV--LEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSM 412 (483)
Q Consensus 335 ~~~~~~~~~fs~~~~p~~~aaa~~al~~--l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~ 412 (483)
+.....++ +.+.....++.++++. .+...+..+.++++.+.+.+.|++++++.+.. +.++++++.+++
T Consensus 236 l~~~~~~~----~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~g~f~~~~~~~----- 305 (354)
T PRK04635 236 LMRVIAPY----PVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLE-GNGNYVLAKFDD----- 305 (354)
T ss_pred HHhhcCCC----CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECC-CCCcEEEEECCC-----
Confidence 76543332 2234444445555532 11112345667778888999998875576654 467777776631
Q ss_pred hhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHH
Q 011567 413 KNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 413 ~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
..++.+. ++++||.++....+. .++.+||++. +++|+++++++|++
T Consensus 306 ------~~~~~~~-l~~~gv~v~~~~~~~-----~~~~lRis~~---~~e~~~~l~~al~~ 351 (354)
T PRK04635 306 ------VDAVFKA-LWDAGIVARAYKDPR-----LANCIRFSFS---NRAETDKLIGLIRN 351 (354)
T ss_pred ------HHHHHHH-HHHCCEEEEECCCCC-----CCCeEEEEeC---CHHHHHHHHHHHHH
Confidence 1245554 456799997542211 1345999974 79999999999975
No 266
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.87 E-value=3e-20 Score=169.99 Aligned_cols=329 Identities=19% Similarity=0.286 Sum_probs=222.8
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhh
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF 189 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~ 189 (483)
..+|+=|-.. -- +..+..+++.++.-- - ..||..+...+||+..|+++|.|.++|++||+..|..+|+..
T Consensus 22 ~~vDLRSDTv-T~-PTdeMr~am~eA~vg----D----dVyGeD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~H 91 (384)
T KOG1368|consen 22 RSVDLRSDTV-TV-PTDEMRRAMAEASVG----D----DVYGEDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVH 91 (384)
T ss_pred eccccccccc-cC-ChHHHHHHHhhcccC----c----ccccCCccHHHHHHHHHHHhCccceeeecccccccHHHHHHH
Confidence 3455555322 12 334555555554332 1 257888888999999999999999999999999999999998
Q ss_pred cc-CCcEEEEcCCchhHHHhH---hhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCC-
Q 011567 190 CK-KGDLIVADEGVHWGIQNG---LYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSG- 259 (483)
Q Consensus 190 ~~-~gdiI~~~~~~h~s~~~g---~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G- 259 (483)
+. ||..|++++..|-..++. ..++|..+..++.. |++++|+.+....- +- ....+++|.+|...++.|
T Consensus 92 c~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~G-D~-H~p~T~LIclENT~~~~Gg 169 (384)
T KOG1368|consen 92 CHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKG-DC-HMPPTKLICLENTHNNCGG 169 (384)
T ss_pred hcCCCceEEeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCC-Cc-cCCCceEEEeeccccccCc
Confidence 75 899999999999766542 34567766666432 57788877763221 11 112589999999888755
Q ss_pred CccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEcccccccc-CCCceeeccHHHHHHH
Q 011567 260 QIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA-TEGGFCTGSARVVDHQ 335 (483)
Q Consensus 260 ~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg-~~GG~i~~~~~~~~~~ 335 (483)
.+.| +.++.+||+++|+.|+.|.+.-+-.--..|-++-+.. ...|-+.-++||++| +.|..++|++++++.-
T Consensus 170 ~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~----~~fDSVsiCLSKglgAPVGSViVG~k~FI~kA 245 (384)
T KOG1368|consen 170 KVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKIC----SAFDSVSICLSKGLGAPVGSVIVGSKDFIDKA 245 (384)
T ss_pred eEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHH----HhhhhhhhhhhccCCCCcccEEEccHHHHHHH
Confidence 7888 4678889999999999998754332111122221111 122555558999998 6688899999988754
Q ss_pred HhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecC-CCCCEEEEEecCCCCCchh
Q 011567 336 RLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASN-PESPIVFLILEKSTGSMKN 414 (483)
Q Consensus 336 ~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~-~~~~i~~l~l~~~~~~~~~ 414 (483)
+.....+..+.-...++|+|++-+|+. +-.....-.++++.+.+.+....++++..+ .+++++.+.+..+.-
T Consensus 246 ~~~RKalGGGmRQsGvLaaaaLval~~---~~~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~---- 318 (384)
T KOG1368|consen 246 RHFRKALGGGMRQSGVLAAAALVALDE---NVPLLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARL---- 318 (384)
T ss_pred HHHHHHhcCchhHHHHHHHHHHHHhhc---chHHHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccC----
Confidence 432222111112245677777766652 223566667788888888887656877654 688999988754332
Q ss_pred hHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 415 DLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 415 ~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
..+++++. +++.||.+..... .++|+.++...|+++++.+..++.+.
T Consensus 319 ---~~~~l~~~-~~k~gi~lm~~~s---------~r~Rivlh~Qvt~~~ve~~~~~~~k~ 365 (384)
T KOG1368|consen 319 ---TAEELCKF-LEKNGILLMGGAS---------RRIRIVLHHQVTDEDVEYVKSVLSKK 365 (384)
T ss_pred ---CHHHHHHH-HHHCCeEEeeccc---------cceEEEEEEecCHHHHHHHHHHHHHH
Confidence 23456775 5667999876422 23899999999999999999999543
No 267
>PLN02509 cystathionine beta-lyase
Probab=99.87 E-value=6e-20 Score=187.53 Aligned_cols=211 Identities=17% Similarity=0.181 Sum_probs=164.0
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHH----hHhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~----~g~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+++++++++.|.+.++++++|.+|+..++ .+.++||.|+++...|+++. ..+...|.++..++.+|+++++
T Consensus 133 pt~~aLE~~lA~leg~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l~ 211 (464)
T PLN02509 133 PTRDALESLLAKLDKADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEVA 211 (464)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHHH
Confidence 578999999999999999999999998875544 57899999999998888765 3445678888888888888887
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+.. ++++|++|.+++++|.+.|+++|+++|++||+++|+|++++.+.++. . .+ ..+|+
T Consensus 212 ~ai~~----------~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~---p----l~---~gaDi 271 (464)
T PLN02509 212 AAIGP----------QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSR---P----LE---LGADI 271 (464)
T ss_pred HhCCc----------CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCC---h----hh---cCCcE
Confidence 76632 37899999999999999999999999999999999999998765542 1 11 23489
Q ss_pred EEccccccccCC----Cceeecc-HHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 310 VTAAMGHALATE----GGFCTGS-ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 310 ~~~s~~K~lg~~----GG~i~~~-~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
+++|++|++++. ||+++.+ +.+.+.++.... ..++.++|+.|+.++..|+.+. .++++.+++++.+.+.|
T Consensus 272 vv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~--~~g~~l~p~~A~l~lr~L~tL~---~R~~r~~~nA~~la~~L 346 (464)
T PLN02509 272 VMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQN--SEGSGLAPFDCWLCLRGIKTMA---LRIEKQQENARKIAMYL 346 (464)
T ss_pred EEecCcccccCCCccceeEEEeccHHHHHHHHHHHH--hcCCCcCHHHHHHHHhhhhhHH---HHHHHHHHHHHHHHHHH
Confidence 999999999742 6777654 444333221110 1123468999888888888774 47888899999999999
Q ss_pred ccCCCc
Q 011567 385 SDIHGL 390 (483)
Q Consensus 385 ~~~~~~ 390 (483)
++.|.+
T Consensus 347 ~~~p~V 352 (464)
T PLN02509 347 SSHPRV 352 (464)
T ss_pred hcCCCc
Confidence 887654
No 268
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=8.2e-21 Score=177.26 Aligned_cols=346 Identities=16% Similarity=0.186 Sum_probs=226.1
Q ss_pred cccCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHH-HHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC--
Q 011567 96 LESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTS-ALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG-- 168 (483)
Q Consensus 96 i~~~~g~~~~-~~G~~~id~~s~---~~lG~~~~p~i~~a~~~-~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g-- 168 (483)
-++.-|.|+. +||+.+||..+. -.+|+ +||.+.+++.+ +..+.=++... -+.+...+....+.+.|-+.-+
T Consensus 62 YEkS~GNYlvDvDGN~lLDvYsQIsSvplGY-n~P~LvK~a~~p~~~~~lvnRPA-Lg~fP~kd~~~~l~~~ll~~APKG 139 (484)
T KOG1405|consen 62 YEKSIGNYLVDVDGNRLLDVYSQISSVPLGY-NNPALVKAAQQPQNATMLVNRPA-LGNFPPKDFAEKLRQSLLSIAPKG 139 (484)
T ss_pred hhhhcCceEEecCCCeeehhhhhhcccccCC-CCHHHHHHhcChHHHHHHhcccc-ccCCChhhHHHHHHHHHHhhCcch
Confidence 4678899999 899999999875 68999 89999888764 22211111000 0122233555666665555543
Q ss_pred CCCEEEecccHHHHHhhhhhhc------cC-------------------C----cEEEEcCCchhHHHhHhhhcCCeEE-
Q 011567 169 TPDSILYSYGLSTMFSAIPCFC------KK-------------------G----DLIVADEGVHWGIQNGLYLSRSTVV- 218 (483)
Q Consensus 169 ~e~~i~~~sG~~a~~~ai~~~~------~~-------------------g----diI~~~~~~h~s~~~g~~~s~~~v~- 218 (483)
.......-+|+.||+.|+++.- +| | .++.+...+|+.+...+.-..++.+
T Consensus 140 ~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SKpIH 219 (484)
T KOG1405|consen 140 QKQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSKPIH 219 (484)
T ss_pred HHHHHHHhccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCCCCceeeeeeccccccccccccccccCcccc
Confidence 3455556889999998875421 11 1 2455677888877766665554321
Q ss_pred -----------------Eec------CC------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC----hH
Q 011567 219 -----------------YFK------HN------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP----LD 265 (483)
Q Consensus 219 -----------------~~~------~~------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~----L~ 265 (483)
.++ +| .++++|+++.+... +..++++||+||+++.+|+-.. ++
T Consensus 220 KldiPaFdWPiA~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~----k~~pVaaiIvEPIQsEGGDnhaSp~Ff~ 295 (484)
T KOG1405|consen 220 KLDIPAFDWPIAPFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRK----KKKPVAAIIVEPIQSEGGDNHASPDFFR 295 (484)
T ss_pred ccCCCCCCCCCCCCccccCChhhhhhhhhhhhhhHHHHHHHHHHHHhh----cCCCeEEEEeechhccCCCccCCHHHHH
Confidence 011 11 25567777766543 2346899999999999997543 89
Q ss_pred HHHHHHHHcCcEEEEeCccccccccCCCCccc-cccCCCCCceeEEEccccccccCCCceeeccHHHHHHHHhcCCceee
Q 011567 266 ELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVF 344 (483)
Q Consensus 266 ~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~~~v~~~~~Di~~~s~~K~lg~~GG~i~~~~~~~~~~~~~~~~~~f 344 (483)
.|+++|+||++.+|+||+|++| |.||..++ ||++++ +.+|++ ||||-|-+ |||.-..+ ++.+...-.|
T Consensus 296 kLrdi~~Kh~v~fivDEVQTGg--GaTGk~WaHehw~l~-~PpD~v--TFSKK~q~-gGffh~~~-----frpn~pYrif 364 (484)
T KOG1405|consen 296 KLRDITKKHGVAFIVDEVQTGG--GATGKFWAHEHWNLD-SPPDVV--TFSKKFQT-GGFFHDEE-----FRPNEPYRIF 364 (484)
T ss_pred HHHHHHHhcCeEEEeeeeecCC--CccCceeeehhcCCC-CCccce--ehhhhhhc-CccccCcc-----cCCCchHHHh
Confidence 9999999999999999999874 77887655 999996 677998 79998854 56654322 2222111122
Q ss_pred cC-CCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccC----CCceeecCCCCCEEEEEecCCCCCchhhHHHH
Q 011567 345 SA-SLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDI----HGLSIASNPESPIVFLILEKSTGSMKNDLQLL 419 (483)
Q Consensus 345 s~-~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~----~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~ 419 (483)
.+ -..|.-+..+.++++.++++ ++.++....++.|.++|.++ ++.--.-.+++.++.+.+++. ..-
T Consensus 365 NTWmGdP~k~lll~~vv~~I~~~-~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps~--------~~R 435 (484)
T KOG1405|consen 365 NTWMGDPSKNLLLEEVVQEIKRE-DLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPSG--------SIR 435 (484)
T ss_pred hhhcCChHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCCh--------HHH
Confidence 21 12455555566677777764 58999999999999998765 221111133566676666432 223
Q ss_pred HHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 420 EDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 420 ~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
.+++.. ++.+|+.+..-.. .+||+.|+...++...+-++++++++++.
T Consensus 436 dk~i~~-~~~nGv~~GGCg~---------~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 436 DKLILI-ARLNGVNLGGCGD---------KSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred HHHHHH-HHHcCceeccccc---------ceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 345553 5557888753221 34999999999999999999999988753
No 269
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=4.5e-19 Score=176.51 Aligned_cols=306 Identities=19% Similarity=0.192 Sum_probs=201.4
Q ss_pred CeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC-CEEEeccc-HHHHHh
Q 011567 108 GKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILYSYG-LSTMFS 184 (483)
Q Consensus 108 G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e-~~i~~~sG-~~a~~~ 184 (483)
|..++||..+ +.++ .+|.+.+++.+.+.....+ .|. ..-..+++++++++++.+ +.+++++| ++++..
T Consensus 17 ~~~~i~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~------~Y~-~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~ 87 (337)
T PRK03967 17 GNYRIWLDKNENPFD--LPEELKEEIFEELKRVPFN------RYP-HITSDPLREAIAEFYGLDAENIAVGNGSDELISY 87 (337)
T ss_pred CCceEEecCCCCCCC--CCHHHHHHHHHHhhcCccc------cCC-CCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHH
Confidence 4567999987 4554 4588999998888653221 121 112477999999999853 45555555 577776
Q ss_pred hhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCC
Q 011567 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSG 259 (483)
Q Consensus 185 ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G 259 (483)
++.++ +||.|+++.+.|..+....+..|.+++.++.. |++++++.+ . +++++++..+++++|
T Consensus 88 ~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~----~-------~~~~v~~~~P~NPtG 154 (337)
T PRK03967 88 LVKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKA----K-------NASAVFICSPNNPTG 154 (337)
T ss_pred HHHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhc----c-------CCCEEEEeCCCCCCC
Confidence 66666 68999999999987777677888888777643 345554432 1 134555566789999
Q ss_pred CccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHHH
Q 011567 260 QIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQR 336 (483)
Q Consensus 260 ~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~ 336 (483)
.+.+.++|.++++ +++++|+||+|.... +. ........ .+..|+++||||++|..| ||+++++++++.++
T Consensus 155 ~~~~~~~l~~i~~-~~~~ii~De~y~~~~-~~---~~~~~~~~--~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~ 227 (337)
T PRK03967 155 NLQPEEEILKVLE-TGKPVVLDEAYAEFS-GK---SLIGLIDE--YPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALY 227 (337)
T ss_pred CCCCHHHHHHHHh-cCCEEEEECchhhhc-cc---chHHHHhh--CCCEEEEecchHhhcchhhhheeeecCHHHHHHHH
Confidence 9999999999995 799999999997532 21 11111111 122588899999998666 99999999998887
Q ss_pred hcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhH
Q 011567 337 LSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDL 416 (483)
Q Consensus 337 ~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~ 416 (483)
.....+ +.+.+...++.++++..+...+.++...++.+.+.+.|.+. . .+++++++++.+
T Consensus 228 ~~~~~~----~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-~----~~~~~~~~~~~~----------- 287 (337)
T PRK03967 228 RIKPPF----SLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY-A----YPSDANFLLLKL----------- 287 (337)
T ss_pred hhcCCC----CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC-c----CCCCCcEEEEhH-----------
Confidence 654332 23455555555555422211234455566667777777653 1 134677776654
Q ss_pred HHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 417 QLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 417 ~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
.+.+.++ ++||.+++... . .++.+|+++. +.++.++++++|+++..
T Consensus 288 ----~~~~~l~-~~gi~v~~~~~-~-----~~~~~Ri~~~---~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 288 ----DAYDYLL-ENGIVVRKLSG-R-----LEGHIRVTVG---KREENDEFIKALKEIKE 333 (337)
T ss_pred ----HHHHHHH-HCCEEEEeCCC-C-----CCCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 1455555 46999986421 1 1345999985 67888888888877654
No 270
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=2.2e-19 Score=171.62 Aligned_cols=338 Identities=19% Similarity=0.266 Sum_probs=232.1
Q ss_pred eEEEeecC-CCCCCCCChHHHHHHHHHHH-hcCCCCCCCCCcccCh--HHHHHH-HHHHHhhhCCCCEEEe-cccHHHHH
Q 011567 110 EVVNFASA-NYLGLIGHEKLLESCTSALE-KYGVGSCGPRGFYGTI--DVHLDC-EARIAKFLGTPDSILY-SYGLSTMF 183 (483)
Q Consensus 110 ~~id~~s~-~~lG~~~~p~i~~a~~~~l~-~~g~g~~~~~~~~g~~--~~~~~l-~~~La~~~g~e~~i~~-~sG~~a~~ 183 (483)
+.|++..+ || .+|.+.+|.-..+. +|.-|..|-|.+.|+. |..++| .++..++||.+.+-+- .||+.||.
T Consensus 27 ~~ieLIASEN~----~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~ 102 (413)
T COG0112 27 EHIELIASENF----TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQ 102 (413)
T ss_pred hceeeeecccc----CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHH
Confidence 45666665 66 66899999887775 6999999999554442 333333 3555668899877555 89999999
Q ss_pred hhhhhhccCCcEEEEcCCchhHHHh---HhhhcCCe--EEEecCC------CHHHHHHHHHHhhhhhhhccCccEEEEEe
Q 011567 184 SAIPCFCKKGDLIVADEGVHWGIQN---GLYLSRST--VVYFKHN------DMDSLRNTLERVTADNKRAKKLRRYIVVE 252 (483)
Q Consensus 184 ~ai~~~~~~gdiI~~~~~~h~s~~~---g~~~s~~~--v~~~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e 252 (483)
+++.++.+|||.|+--...|+..+. .+..+|.. .+.++.+ |+|.++++.++.. .++||.-
T Consensus 103 av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~k---------PK~ii~G 173 (413)
T COG0112 103 AVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVK---------PKLIIAG 173 (413)
T ss_pred HHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhC---------CCEEEEC
Confidence 9999999999999876666655332 23444443 3333332 8899999888765 3466653
Q ss_pred cccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccc-cCCCceeeccH-H
Q 011567 253 AVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-ATEGGFCTGSA-R 330 (483)
Q Consensus 253 ~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~l-g~~GG~i~~~~-~ 330 (483)
. +.--...|+++++++|++-|++|++|-+|-.|... .|.. .+ +-...|++++|.+|+| |+.||++++++ +
T Consensus 174 ~--SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA---~G~~--p~-P~~~AdvVTtTTHKTlrGPrGG~Il~~~ee 245 (413)
T COG0112 174 G--SAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIA---GGVH--PN-PLPHADVVTTTTHKTLRGPRGGIILTNDEE 245 (413)
T ss_pred c--cccccccCHHHHHHHHHHhCceEEehHHHHHHHHh---cccC--CC-CCCccceEeCCcccCCCCCCceEEEeccHH
Confidence 2 22245568999999999999999999999777553 1221 11 1133699999999999 78999999885 7
Q ss_pred HHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHhhccCCCceeecC-CCCCEEEEEecCC
Q 011567 331 VVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEEN-PDLITKLKKNTAILRTGLSDIHGLSIASN-PESPIVFLILEKS 408 (483)
Q Consensus 331 ~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~-~~~~~~l~~~~~~l~~~L~~~~~~~i~~~-~~~~i~~l~l~~~ 408 (483)
+.+.+...-.+...++.+....++-+.+.-+.++.+ .+..+++.+|++.|.+.|.+. |+.+.+. .++.++.+.+.+.
T Consensus 246 l~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~~~ 324 (413)
T COG0112 246 LAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVLVDLRSK 324 (413)
T ss_pred HHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEEEEcccC
Confidence 777776544444444433334444444444545443 568889999999999999985 9998753 4677777777532
Q ss_pred CCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccC-CCCCceEEEccC----CCCHHHHHHHHHHHHHHHHH
Q 011567 409 TGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKC-RLPVGIRLFVSA----AHSEADLVKACESLKRISAV 477 (483)
Q Consensus 409 ~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~-~~~~~lRi~~~~----~~t~edi~~~~~~l~~~~~~ 477 (483)
+ ...+-++.+|.+.||.+.....|.-+.. ..+.||||..++ ...++|++++.+.|.+++..
T Consensus 325 -~-------~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 325 -G-------LTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred -C-------CCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 1 1113455678888998876654433222 246789996544 45688999999988888753
No 271
>PRK02769 histidine decarboxylase; Provisional
Probab=99.86 E-value=3.4e-19 Score=178.55 Aligned_cols=287 Identities=15% Similarity=0.100 Sum_probs=207.8
Q ss_pred ChHHHHHHHHHHHhhhCCC--C--EEEecccHHHHHhhhhhhc--cCCcEEEEcCCchhHHHhHhhhcCCeEEEecC---
Q 011567 152 TIDVHLDCEARIAKFLGTP--D--SILYSYGLSTMFSAIPCFC--KKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH--- 222 (483)
Q Consensus 152 ~~~~~~~l~~~La~~~g~e--~--~i~~~sG~~a~~~ai~~~~--~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~--- 222 (483)
+.+...++.+.+++++|.+ + .++.++|+++|..++.+.. .+++.|++.+..|.|+.++++..+.....++.
T Consensus 63 ~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~ 142 (380)
T PRK02769 63 SFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLPN 142 (380)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCCC
Confidence 4567888999999999964 3 3566888999887765442 46789999999999999998877765554443
Q ss_pred --CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcC---cEEEEeCccccccccCCCCccc
Q 011567 223 --NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYR---FRVFLDESNSFGVLGRSGRGLT 297 (483)
Q Consensus 223 --~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~---~~li~DEa~s~g~lg~~G~g~~ 297 (483)
-|+++|++.+++.. ..+++|++....+.+|.+.|+++|.++|++|| +++++|.++++|.+... +..
T Consensus 143 g~id~~~L~~~i~~~~-------~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~-~~~- 213 (380)
T PRK02769 143 GEIDYDDLISKIKENK-------NQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFV-NNP- 213 (380)
T ss_pred CcCcHHHHHHHHHhCC-------CCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeeccc-Ccc-
Confidence 27888988887642 13678888888999999999999999999998 79999999998765311 000
Q ss_pred cccCCCCCceeEEEcccccccc-CCC-ceeeccHHHHHHHHhc-----CCceeecCCCcHHHHHHHHHHHHHHhcC--cH
Q 011567 298 EHCGVPVDKIDIVTAAMGHALA-TEG-GFCTGSARVVDHQRLS-----SSGYVFSASLPPYLASAAITAIDVLEEN--PD 368 (483)
Q Consensus 298 ~~~~v~~~~~Di~~~s~~K~lg-~~G-G~i~~~~~~~~~~~~~-----~~~~~fs~~~~p~~~aaa~~al~~l~~~--~~ 368 (483)
..++.. ..+|.++.|.+|.++ +.| |+++.+++..+.+... ...+++.++-|...+++..++++.+... .+
T Consensus 214 ~~~d~~-~~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~ 292 (380)
T PRK02769 214 PPFSFA-DGIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQ 292 (380)
T ss_pred ccCCcc-CCCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHH
Confidence 113333 267999999999998 544 6766666655544221 1112334455556666677788877532 46
Q ss_pred HHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCC
Q 011567 369 LITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLP 448 (483)
Q Consensus 369 ~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~ 448 (483)
..++..++++++.++|++. |+++..++.++++.+..++ + ++ . +|..+.+. +
T Consensus 293 ~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~v~f~~~~-------~-----~~-----~-~~w~l~~~----------~ 343 (380)
T PRK02769 293 RVQHCLDMAQYAVDRLQAN-GIPAWRNPNSITVVFPCPS-------E-----RI-----W-KKWHLATS----------G 343 (380)
T ss_pred HHHHHHHHHHHHHHHHHhC-CCEEEcCCCceEEEEcCCC-------H-----HH-----H-hCeeEccc----------C
Confidence 7888999999999999885 8888878888888775321 1 11 1 35655543 1
Q ss_pred CceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 449 VGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 449 ~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
..+|+++...+|++.+|++++.|.+..+.
T Consensus 344 ~~~hi~~~~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 344 NQAHIITMPHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence 34899999999999999999999887764
No 272
>PLN02397 aspartate transaminase
Probab=99.86 E-value=1e-19 Score=186.26 Aligned_cols=328 Identities=15% Similarity=0.099 Sum_probs=204.8
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC-C------CCEE-----Eec
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG-T------PDSI-----LYS 176 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g-~------e~~i-----~~~ 176 (483)
...||++.+.+-....+|.+.+++.++....-.. +.-..|+...-..+|++.+++++. . ++.+ +.+
T Consensus 48 ~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~--~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g 125 (423)
T PLN02397 48 PVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAG--SRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSG 125 (423)
T ss_pred cceEecccceeeCCCCCcccchHHHHHHHHhhcc--CCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccc
Confidence 3468888775434334455555555553221000 000123333344567777777652 1 1212 223
Q ss_pred ccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC-------CCHHHHHHHHHHhhhhhhhccCccEEE
Q 011567 177 YGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTADNKRAKKLRRYI 249 (483)
Q Consensus 177 sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~-------~d~~~Le~~l~~~~~~~~~~~~~~~~i 249 (483)
+|+.++..++.++..+||.|++++++|..+...+...|.+++.++. .|++.+++.+++... +++++
T Consensus 126 ~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~-------~~~~i 198 (423)
T PLN02397 126 TGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPD-------GSFVL 198 (423)
T ss_pred hHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCC-------CCEEE
Confidence 4444455555555569999999999999999999999999887753 156667666654321 36788
Q ss_pred EEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccc--cccCCCCCceeEEEccccccccCCC--
Q 011567 250 VVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT--EHCGVPVDKIDIVTAAMGHALATEG-- 322 (483)
Q Consensus 250 v~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~--~~~~v~~~~~Di~~~s~~K~lg~~G-- 322 (483)
++...+|++|.+.+ +++|+++|++||+++|.||+|....++....... ..+.-. .+.-|+++||||+++..|
T Consensus 199 ~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~-~~~vI~~~SfSK~~~~~G~R 277 (423)
T PLN02397 199 LHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVED-GHEILVAQSYAKNMGLYGER 277 (423)
T ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhc-CCcEEEEEECcccCCCcccc
Confidence 88889999999988 7888999999999999999998765532101111 111101 122588899999999776
Q ss_pred -ceee---ccHHHHHH----HHhcCCceeecCCCcHHHHHHHHHHHHHH-------hcCcHHHHHHHHHHHHHHHhhccC
Q 011567 323 -GFCT---GSARVVDH----QRLSSSGYVFSASLPPYLASAAITAIDVL-------EENPDLITKLKKNTAILRTGLSDI 387 (483)
Q Consensus 323 -G~i~---~~~~~~~~----~~~~~~~~~fs~~~~p~~~aaa~~al~~l-------~~~~~~~~~l~~~~~~l~~~L~~~ 387 (483)
||++ +++++++. +...... .+. +.+.....++.++++.- +...+.++.++++.+.+.+.|+++
T Consensus 278 vG~~v~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~ 355 (423)
T PLN02397 278 VGALSVVCKSADVAVRVKSQLKLIARP-MYS-NPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEAR 355 (423)
T ss_pred ceEEEEEeCCHHHHHHHHHHHHHHHhc-ccC-CCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9973 45555443 2222111 121 12344444444444211 111346778888999999999887
Q ss_pred CC----ceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHH
Q 011567 388 HG----LSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEAD 463 (483)
Q Consensus 388 ~~----~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ed 463 (483)
+ +.+..+.++.++++.+. .+++++++++.||.+.. . .|+++.. .+++.
T Consensus 356 -~~~~~~~~~~p~gg~fl~~~l~-------------~~~~~~Ll~~~~V~v~~------------~-~Ri~~~~-~~~~~ 407 (423)
T PLN02397 356 -GSPGDWSHITKQIGMFSFTGLN-------------KEQVDRMTKEYHIYMTR------------D-GRISMAG-LSSKN 407 (423)
T ss_pred -CCCCCCCcccCCceEEEecCCC-------------HHHHHHHHHhCCEEECC------------C-CeEEEee-CCHHH
Confidence 5 55544545666666551 14677788888999952 2 2898843 78999
Q ss_pred HHHHHHHHHHHHH
Q 011567 464 LVKACESLKRISA 476 (483)
Q Consensus 464 i~~~~~~l~~~~~ 476 (483)
+++++++|++++.
T Consensus 408 i~~~~~~i~~~~~ 420 (423)
T PLN02397 408 VPYLADAIHAVVT 420 (423)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999874
No 273
>PRK08354 putative aminotransferase; Provisional
Probab=99.86 E-value=1.2e-18 Score=171.55 Aligned_cols=295 Identities=15% Similarity=0.127 Sum_probs=187.5
Q ss_pred eeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhh
Q 011567 109 KEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIP 187 (483)
Q Consensus 109 ~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~ 187 (483)
..+|||+.+ |+++ +|.+.+++.+.++... .|. ....+++.+++++|. +.++.+++++++..++.
T Consensus 8 ~~~i~l~~~~np~~---p~~~~~a~~~~~~~~~--------~yp---~~~~l~~~ia~~~~~-~I~vt~G~~~al~~~~~ 72 (311)
T PRK08354 8 EGLIDFSASVNPYP---PEWLDEMFERAKEISG--------RYT---YYEWLEEEFSKLFGE-PIVITAGITEALYLIGI 72 (311)
T ss_pred cceeEecCCCCCCC---CHHHHHHHHHHHHHhh--------cCC---ChHHHHHHHHHHHCC-CEEECCCHHHHHHHHHH
Confidence 468999998 7764 3788888887765421 111 135789999999984 44445556678776664
Q ss_pred hhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC---h
Q 011567 188 CFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP---L 264 (483)
Q Consensus 188 ~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~---L 264 (483)
.+ .+||.|+++.++|..+...++..|.+++.++ .|++.+++.+++ +..++++. ++|++|.+.+ +
T Consensus 73 ~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~-~d~~~l~~~~~~----------~~~vi~~~-P~NPTG~~~~~~~l 139 (311)
T PRK08354 73 LA-LRDRKVIIPRHTYGEYERVARFFAARIIKGP-NDPEKLEELVER----------NSVVFFCN-PNNPDGKFYNFKEL 139 (311)
T ss_pred hh-CCCCeEEEeCCCcHHHHHHHHHcCCEEeecC-CCHHHHHHhhcC----------CCEEEEec-CCCCCCCccCHHHH
Confidence 44 4899999999999999999999999887764 467777665532 23444444 4789999988 6
Q ss_pred HHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC---ceeeccHHHHHHHHhcCCc
Q 011567 265 DELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSG 341 (483)
Q Consensus 265 ~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~~~~~~ 341 (483)
++|+++|++||+++|+||+|..++.+. .. .. .+..++++||||++|.+| ||+++ ..+.++.....
T Consensus 140 ~~l~~~a~~~~~~li~De~y~~f~~~~--~~------~~-~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~~ 207 (311)
T PRK08354 140 KPLLDAVEDRNALLILDEAFIDFVKKP--ES------PE-GENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRMP 207 (311)
T ss_pred HHHHHHhhhcCcEEEEeCcchhccccc--cc------cC-CCcEEEEeccHhhcCCccceeeeeee---hHHHHHHcCCC
Confidence 778888999999999999998765432 11 11 234688999999999777 99988 44555443322
Q ss_pred eeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHH
Q 011567 342 YVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLED 421 (483)
Q Consensus 342 ~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~ 421 (483)
+ +.+....+++.+.++ .. .++++++.+.+++..+.+.+.... .+.++++.+.+.+ ..+
T Consensus 208 ~----~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~-----------~~~ 265 (311)
T PRK08354 208 W----SIGSTGYAFLEFLIE---DD---FEHLRKTMPLIWREKERFEKALYV-KSDANFFIKDVGD-----------AEK 265 (311)
T ss_pred c----cCCHHHHHHHHHHHH---hH---HHHHHHHHHHHHHHHHHHHHhcCC-CCCCcEEEEECCC-----------HHH
Confidence 2 123333333322222 11 122223333333322221111111 3456666654421 124
Q ss_pred HHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 422 IADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 422 i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
+++.+ .++||.+.+...+.. ++.+||++. +.++.+++.++++++
T Consensus 266 ~~~~l-~~~gv~v~~g~~f~~-----~~~iRi~~~---~~~~~~~l~~al~~~ 309 (311)
T PRK08354 266 FVEFL-KRNGILVRDCTSFGL-----PGYIRFSVR---DREENEKLIRALREW 309 (311)
T ss_pred HHHHH-HHCCeEEEecccCCC-----CCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 66654 456999998765432 345999985 567788888877764
No 274
>PLN02880 tyrosine decarboxylase
Probab=99.86 E-value=2.9e-19 Score=184.81 Aligned_cols=315 Identities=12% Similarity=0.101 Sum_probs=205.5
Q ss_pred ChHHHHHHHHHHHhhhCCCC---------EEEecccHHHHHhhhhhhcc-----------CCcEEEEcCCchhHHHhHhh
Q 011567 152 TIDVHLDCEARIAKFLGTPD---------SILYSYGLSTMFSAIPCFCK-----------KGDLIVADEGVHWGIQNGLY 211 (483)
Q Consensus 152 ~~~~~~~l~~~La~~~g~e~---------~i~~~sG~~a~~~ai~~~~~-----------~gdiI~~~~~~h~s~~~g~~ 211 (483)
...+..++-+++++++|.++ .++.++|++||..++.+... +.-+|++++..|+|+.+++.
T Consensus 120 ~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~ 199 (490)
T PLN02880 120 ATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQ 199 (490)
T ss_pred cHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHH
Confidence 45677788888899888654 56778889999887644321 23367789999999999999
Q ss_pred hcCCe---EEEecC-------CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEe
Q 011567 212 LSRST---VVYFKH-------NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLD 281 (483)
Q Consensus 212 ~s~~~---v~~~~~-------~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~D 281 (483)
+.|.. ++.++. -|+++|++.+++...+ .....+|+...-..++|.+.|+++|.++|++||+|+++|
T Consensus 200 ~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~----g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVD 275 (490)
T PLN02880 200 IAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSS----GLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVD 275 (490)
T ss_pred HcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHC----CCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEe
Confidence 88862 444433 2788999988765432 223455666656667899999999999999999999999
Q ss_pred CccccccccC-CCCccccccCCCCCceeEEEccccccccC-CC-ceeeccH-H-HHHHHHhcCCceeecC------CCc-
Q 011567 282 ESNSFGVLGR-SGRGLTEHCGVPVDKIDIVTAAMGHALAT-EG-GFCTGSA-R-VVDHQRLSSSGYVFSA------SLP- 349 (483)
Q Consensus 282 Ea~s~g~lg~-~G~g~~~~~~v~~~~~Di~~~s~~K~lg~-~G-G~i~~~~-~-~~~~~~~~~~~~~fs~------~~~- 349 (483)
.+|+++.+-. ..+.. ..|+ ..+|.++.+++|+++. .| |++..++ . ..+.+.. ...|.+.. ..+
T Consensus 276 aA~gg~~~~~~~~~~~--l~gi--e~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~-~~~Yl~~~~~~~~~~~~~ 350 (490)
T PLN02880 276 AAYAGSACICPEYRHY--IDGV--EEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLST-NPEFLKNKASQANSVVDY 350 (490)
T ss_pred hhhHHHHHhCHHHHHH--hcCc--hhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHcc-CHHHhcCccccccCCCCh
Confidence 9998875421 11111 1233 3468999999999973 23 5544332 2 2222211 11121110 000
Q ss_pred ---------HHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHH
Q 011567 350 ---------PYLASAAITAIDVLEE--NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQL 418 (483)
Q Consensus 350 ---------p~~~aaa~~al~~l~~--~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~ 418 (483)
.+.+.....+++.+-. ..+.+++..++++++.+.|.+.+++++..++..+++.+++.+.....+.....
T Consensus 351 ~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~~~~~~~~ 430 (490)
T PLN02880 351 KDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNNEDNGNKL 430 (490)
T ss_pred hccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCChhhHHHH
Confidence 0111222233444322 12344444589999999998888999988888889999986532222222445
Q ss_pred HHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCC-CHHHHHHHHHHHHHHHHHHHhc
Q 011567 419 LEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAH-SEADLVKACESLKRISAVVLRD 481 (483)
Q Consensus 419 ~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~-t~edi~~~~~~l~~~~~~~~~~ 481 (483)
..++.+++.+++.++++...... ...+|+++.... |++|++.+++.|++...+++.+
T Consensus 431 n~~l~~~l~~~g~~~v~~t~~~g------~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~~ 488 (490)
T PLN02880 431 NHDLLDAVNSSGKIFISHTVLSG------KYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLGK 488 (490)
T ss_pred HHHHHHHHHhCCCEEEEEEEECC------EEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 56777777777778887654322 134999886555 5699999999999998887654
No 275
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=2e-19 Score=181.77 Aligned_cols=213 Identities=15% Similarity=0.130 Sum_probs=162.0
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhh----hcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY----LSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~----~s~~~v~~~~~~d~~~Le 229 (483)
+...+||++||++.|.+.++++++|++|+..++.++.++||.|++..+.|.+....+. ..+.++..++..|+++++
T Consensus 61 p~~~~Le~~lA~~~g~~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l~ 140 (388)
T PRK07811 61 PTRTALEEQLAALEGGAYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAVR 140 (388)
T ss_pred ccHHHHHHHHHHHhCCCceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHHH
Confidence 4578999999999999999999999999999999999999999999888876544332 246677777777888887
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+.+ ++++|++|.+.+++|.+.++++|+++|++||+++|+||+++.+..+. . .+ ...|+
T Consensus 141 ~~i~~----------~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~---p----~~---~gaDi 200 (388)
T PRK07811 141 AAITP----------RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQ---P----LA---LGADV 200 (388)
T ss_pred HhcCc----------CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCC---c----hh---hCCcE
Confidence 76643 26899999999999999999999999999999999999998654321 1 11 23489
Q ss_pred EEccccccccCC----Cceeec-cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 310 VTAAMGHALATE----GGFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 310 ~~~s~~K~lg~~----GG~i~~-~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
+++|++|.+++. ||++++ ++++.+.++... ...+...+|..+..+...++.+ +.++++..++...+.+.|
T Consensus 201 vv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~--~~~g~~~s~~~a~l~~~~L~tl---~~R~~~~~~na~~la~~L 275 (388)
T PRK07811 201 VVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQ--NGAGAVPGPFDAYLTLRGLKTL---AVRMDRHSENAEAVAEFL 275 (388)
T ss_pred EEecCceeecCCCCcEEEEEEECCHHHHHHHHHHH--HhcCCCCCHHHHHHHHhccCcH---HHHHHHHHHHHHHHHHHH
Confidence 999999999853 587665 566666554321 1123345677666555555543 457788888999999999
Q ss_pred ccCCCce
Q 011567 385 SDIHGLS 391 (483)
Q Consensus 385 ~~~~~~~ 391 (483)
++.+++.
T Consensus 276 ~~~p~v~ 282 (388)
T PRK07811 276 AGHPEVS 282 (388)
T ss_pred HhCCCee
Confidence 8876543
No 276
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.86 E-value=4.2e-19 Score=180.32 Aligned_cols=331 Identities=12% Similarity=0.078 Sum_probs=220.3
Q ss_pred CChHHHHHHHHHHHh-cCCCCCCCCCcccChHHHHHHHHHHHhhhCCC----CEEE--ecccHHHHHhhhhhhc----c-
Q 011567 124 GHEKLLESCTSALEK-YGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP----DSIL--YSYGLSTMFSAIPCFC----K- 191 (483)
Q Consensus 124 ~~p~i~~a~~~~l~~-~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e----~~i~--~~sG~~a~~~ai~~~~----~- 191 (483)
.+|++.+++.+.+.+ ++..+..+ .......+..+++++++|.+ +.++ .++|++||..++.+.. .
T Consensus 53 ~~p~~~~~~~~~l~~~~~np~s~~----~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~ 128 (431)
T TIGR01788 53 MEPEARKLMDETINKNMIDKDEYP----QTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKR 128 (431)
T ss_pred CCHHHHHHHHHHHhcCCCCcccCc----cHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHH
Confidence 468888888888874 33322222 23378888999999999976 3443 4888999988875432 1
Q ss_pred --------CCcEEEEcCCchhHHHhHhhhcCCeEEEecCC------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCC
Q 011567 192 --------KGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQN 257 (483)
Q Consensus 192 --------~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~ 257 (483)
++..|++....|.++.+++...|.++..++.+ |+++|++.+++ .+.+|++...+++
T Consensus 129 ~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~----------~t~lV~~t~g~t~ 198 (431)
T TIGR01788 129 MEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVDE----------NTIGVVCILGTTY 198 (431)
T ss_pred HHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHhh----------CCeEEEEEeCCCC
Confidence 12479999999999999998888777666532 56777777753 2678888889999
Q ss_pred CCCccChHHHHHHHHHc------CcEEEEeCccccccccC-CCCccccccCCCCCceeEEEccccccc-cCCC-ceeecc
Q 011567 258 SGQIAPLDELIRLKEKY------RFRVFLDESNSFGVLGR-SGRGLTEHCGVPVDKIDIVTAAMGHAL-ATEG-GFCTGS 328 (483)
Q Consensus 258 ~G~i~~L~~l~~l~~k~------~~~li~DEa~s~g~lg~-~G~g~~~~~~v~~~~~Di~~~s~~K~l-g~~G-G~i~~~ 328 (483)
+|.+.|+++|.++|++| |+++++|.+|+++.+.- .++ .. ++.....+|.++.|.+|.+ |+.| |+++.+
T Consensus 199 tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~-~~--~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r 275 (431)
T TIGR01788 199 TGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPD-LE--WDFRLPRVKSINVSGHKYGLVYPGVGWVIWR 275 (431)
T ss_pred CcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCC-ch--hhcCCCCceEEEECchhccCCCCCcEEEEEe
Confidence 99999999999999999 99999999999665210 011 11 1122356799999999987 7666 766544
Q ss_pred HH--HHHHHHhc----C---CceeecCCCcHHHHHHHHHHHHHHh--cCcHHHHHHHHHHHHHHHhhccCCCceeecC-C
Q 011567 329 AR--VVDHQRLS----S---SGYVFSASLPPYLASAAITAIDVLE--ENPDLITKLKKNTAILRTGLSDIHGLSIASN-P 396 (483)
Q Consensus 329 ~~--~~~~~~~~----~---~~~~fs~~~~p~~~aaa~~al~~l~--~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~-~ 396 (483)
+. +.+.+... + ..++...+-+...+.+....+..+- ...++.++..++++++.+.|++.+++++..+ +
T Consensus 276 ~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~ 355 (431)
T TIGR01788 276 DEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGS 355 (431)
T ss_pred ChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCC
Confidence 33 22322111 0 0112222222112223334444432 2246788889999999999999888998865 6
Q ss_pred CCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 397 ESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 397 ~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
..+++.+++++... ......++.+. |.++|+.+.....|..-+. ..-+|+++...++++.++++++.|++++.
T Consensus 356 ~~~iV~Fr~~~~~~----~~~~~~~l~~~-L~~~G~~~~~~~~p~~~~~--~~~lR~~~~~~~~~~~~~~~~~~~~~~~~ 428 (431)
T TIGR01788 356 GIPLVAFKLKDDAD----PGYTLYDLSHR-LRERGWIVPAYTLPKNAED--IVVMRIVVREGFSRDLAELLIEDIEAALA 428 (431)
T ss_pred CceEEEEEeCCCCC----CCcCHHHHHHH-HHHCCCcccCCCCCCccCC--eEEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 78899999864221 11124456665 5567886543322211000 01289999889999999999999999886
Q ss_pred HH
Q 011567 477 VV 478 (483)
Q Consensus 477 ~~ 478 (483)
.+
T Consensus 429 ~~ 430 (431)
T TIGR01788 429 YL 430 (431)
T ss_pred hh
Confidence 54
No 277
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=2e-19 Score=179.97 Aligned_cols=212 Identities=15% Similarity=0.145 Sum_probs=167.7
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHh----hhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL----YLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~----~~s~~~v~~~~~~d~~~Le 229 (483)
+....||++||++-|.+.+++|+||++|+.+++.++.++||.|+++...|+++...+ ...|.++..++..|+++++
T Consensus 62 Pt~~~le~~la~LEg~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l~ 141 (395)
T PRK08114 62 LTHFSLQEAMCELEGGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADIA 141 (395)
T ss_pred hhHHHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHH
Confidence 567889999999999999999999999999999999999999999887877766544 4457889899888998888
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcC--cEEEEeCccccccccCCCCccccccCCCCCce
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYR--FRVFLDESNSFGVLGRSGRGLTEHCGVPVDKI 307 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~--~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~ 307 (483)
+.++. ++++|++|.+.|++|.+.|+++|+++|+++| +++++|.+++.+.+ +......+
T Consensus 142 ~~l~~----------~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~----------~~pl~~Ga 201 (395)
T PRK08114 142 KLIQP----------NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL----------FKALDFGI 201 (395)
T ss_pred HhcCC----------CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc----------cCHHHcCC
Confidence 87743 3789999999999999999999999999985 99999999976532 11112345
Q ss_pred eEEEccccccccC----CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHh
Q 011567 308 DIVTAAMGHALAT----EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTG 383 (483)
Q Consensus 308 Di~~~s~~K~lg~----~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~ 383 (483)
|+++.|.+|.+++ .+|.++++++..+.++.. ....+..++|..|...+..|+-+ +-+.++..+++..+.+.
T Consensus 202 Divv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~--~~~~G~~~~p~~a~l~~rgl~TL---~lR~~~~~~na~~va~~ 276 (395)
T PRK08114 202 DISIQAGTKYLVGHSDAMIGTAVANARCWEQLREN--SYLMGQMVDADTAYMTSRGLRTL---GVRLRQHEESSLKVAEW 276 (395)
T ss_pred cEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHH--HHhccCCCCHHHHHHHHcCCCcH---HHHHHHHHHHHHHHHHH
Confidence 9999999999973 347777777765554422 22334567888887776666544 34778888899999999
Q ss_pred hccCCCc
Q 011567 384 LSDIHGL 390 (483)
Q Consensus 384 L~~~~~~ 390 (483)
|++.|.+
T Consensus 277 L~~hp~V 283 (395)
T PRK08114 277 LAEHPEV 283 (395)
T ss_pred HHcCCCE
Confidence 9887643
No 278
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.85 E-value=1.3e-18 Score=175.68 Aligned_cols=312 Identities=18% Similarity=0.207 Sum_probs=204.5
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhh-ccCCcEEEEcCCchh
Q 011567 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF-CKKGDLIVADEGVHW 204 (483)
Q Consensus 126 p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~-~~~gdiI~~~~~~h~ 204 (483)
++-.+++.+.++.. . . ...+...+||+++++++|.+.++.+++|++|+..++.++ .++||.|++....|.
T Consensus 14 ~~e~~~~~~~l~~~-~-------~-~~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~ 84 (379)
T PRK11658 14 DEELAAVKEVLRSG-W-------I-TTGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWV 84 (379)
T ss_pred HHHHHHHHHHHHcC-C-------c-cCCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHH
Confidence 45577777777652 2 1 122457899999999999999999999999999999998 799999999999999
Q ss_pred HHHhHhhhcCCeEEEecCC------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEE
Q 011567 205 GIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRV 278 (483)
Q Consensus 205 s~~~g~~~s~~~v~~~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~l 278 (483)
++...+...|.+++.++.+ |++++++.+.. ++++|+..+ .+|...|+++|.++|++||+++
T Consensus 85 ~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~----------~tkav~~~~---~~G~~~d~~~i~~~a~~~gi~v 151 (379)
T PRK11658 85 STLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP----------RTKAIIPVH---YAGAPADLDAIRAIGERYGIPV 151 (379)
T ss_pred HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc----------CCeEEEEeC---CCCCcCCHHHHHHHHHHcCCeE
Confidence 9988888889998877642 56777766532 255665332 3689999999999999999999
Q ss_pred EEeCccccccccCCCCccccccCCCCCceeEEEcccccccc-CCCceeec-cHHHHHHHHh---cCCc------------
Q 011567 279 FLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA-TEGGFCTG-SARVVDHQRL---SSSG------------ 341 (483)
Q Consensus 279 i~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg-~~GG~i~~-~~~~~~~~~~---~~~~------------ 341 (483)
|+|++|++|..- .|+.+ +- ...++..++-+|.+. +.||+++. ++++.+.++. .+..
T Consensus 152 i~D~a~a~g~~~-~~~~~----g~--~g~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 224 (379)
T PRK11658 152 IEDAAHAVGTYY-KGRHI----GA--RGTAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRA 224 (379)
T ss_pred EEECCCccCCeE-CCeec----CC--CCCEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCC
Confidence 999999977532 12211 11 122566555568774 55788776 4666655432 1100
Q ss_pred --e-----eecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCC----C-CEEEEEecCCC
Q 011567 342 --Y-----VFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPE----S-PIVFLILEKST 409 (483)
Q Consensus 342 --~-----~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~----~-~i~~l~l~~~~ 409 (483)
+ .+...++.+.+|.++..++.++ +..++-+++.+++.+.|++++...+..+.. + .++.+.+....
T Consensus 225 ~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~---~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (379)
T PRK11658 225 PQAEVLTPGYKYNLADINAAIALVQLAKLE---ALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEER 301 (379)
T ss_pred CcceeeccccccCcCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCcc
Confidence 0 0112256667777777776654 467778888889999998774332221111 1 23444443211
Q ss_pred CCchhhHHHHHHHHHHHHHhCCEEEEeeccccc---------ccCCCCC-------ceEEEccCCCCHHHHHHHHHHHHH
Q 011567 410 GSMKNDLQLLEDIADWALKEDGVFVVTSKRSML---------DKCRLPV-------GIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 410 ~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~---------~~~~~~~-------~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
... ...++.+. |+++||.+.....+.. .....|. .|.+.++..+|++|+++++++|++
T Consensus 302 ~~~-----~r~~~~~~-L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~ 375 (379)
T PRK11658 302 CGI-----SRDALMEA-LKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQ 375 (379)
T ss_pred ccC-----CHHHHHHH-HHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 000 12245654 5566887653221110 0011122 277777888999999999999998
Q ss_pred HH
Q 011567 474 IS 475 (483)
Q Consensus 474 ~~ 475 (483)
++
T Consensus 376 ~~ 377 (379)
T PRK11658 376 IA 377 (379)
T ss_pred HH
Confidence 75
No 279
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.85 E-value=4.3e-19 Score=184.12 Aligned_cols=329 Identities=15% Similarity=0.165 Sum_probs=204.2
Q ss_pred CChHHHHHHHHHHHhcCCCCCCC-CCcccChHHHHHHHHHHHhhhCCCCEEEe-cccHHHHHhh---hhh-hccCCc---
Q 011567 124 GHEKLLESCTSALEKYGVGSCGP-RGFYGTIDVHLDCEARIAKFLGTPDSILY-SYGLSTMFSA---IPC-FCKKGD--- 194 (483)
Q Consensus 124 ~~p~i~~a~~~~l~~~g~g~~~~-~~~~g~~~~~~~l~~~La~~~g~e~~i~~-~sG~~a~~~a---i~~-~~~~gd--- 194 (483)
.+|.+.+++.+...-++.....+ ....|..+...++++.+++++|.+.+.++ ++|+.+...+ ++. +..+||
T Consensus 82 ~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~ 161 (481)
T PRK04366 82 YNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKR 161 (481)
T ss_pred CCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCC
Confidence 45778887776522222222222 13556778889999999999999877666 5665544332 332 344554
Q ss_pred -EEEEcCCchhHHHhHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCc-cChHHH
Q 011567 195 -LIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQI-APLDEL 267 (483)
Q Consensus 195 -iI~~~~~~h~s~~~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i-~~L~~l 267 (483)
.|++....|.++...+...|.+++.++.+ |+++|++.+.. .+++|++.... ++|.+ .|+++|
T Consensus 162 ~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~----------~t~~V~v~~Pn-~tG~~~~dl~eI 230 (481)
T PRK04366 162 TEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVGE----------DTAALMLTNPN-TLGLFERNILEI 230 (481)
T ss_pred CEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhccc----------CCeEEEEeCCC-CccccchHHHHH
Confidence 88888899999999999999988887652 66677666532 24555555544 67877 589999
Q ss_pred HHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCC-------CceeeccHHHHHHHHh---
Q 011567 268 IRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATE-------GGFCTGSARVVDHQRL--- 337 (483)
Q Consensus 268 ~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~-------GG~i~~~~~~~~~~~~--- 337 (483)
.++|+++|+++++|+++..+.+|.... .. ..+|+++++.+|+|+.+ +|+++.++++.+.+..
T Consensus 231 ~~~a~~~gal~iVD~a~~~~~~g~~~~---~~-----~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v 302 (481)
T PRK04366 231 AEIVHEAGGLLYYDGANLNAILGKARP---GD-----MGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVV 302 (481)
T ss_pred HHHHHHcCCEEEEEecChhhhcccCCc---cc-----cCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCee
Confidence 999999999999999998665543111 11 24599999999999622 2677777777665521
Q ss_pred --cCCceeecC------------CCcHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEE
Q 011567 338 --SSSGYVFSA------------SLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIV 401 (483)
Q Consensus 338 --~~~~~~fs~------------~~~p~~~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~ 401 (483)
.+.+|.+.. +.+.+.+.++...+..+-.+ .+..++..+++++++++|.++ +.+... ...+.
T Consensus 303 ~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~-~~~~~ 379 (481)
T PRK04366 303 EKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYD-RPCMH 379 (481)
T ss_pred eccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCC-CCeeE
Confidence 111222211 11222233333333333211 234566777899999999886 333211 11122
Q ss_pred EEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011567 402 FLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLRD 481 (483)
Q Consensus 402 ~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~ 481 (483)
.+.+.... .........++.+++. ++||.+....+|.. ....+|++++..+|++|||+++++|+++.+++..+
T Consensus 380 ~~~~~~~~--~~~~g~~~~~v~~~L~-~~Gi~~~~~~~p~~----~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~~ 452 (481)
T PRK04366 380 EFVLSGKK--LKETGVRTLDIAKRLL-DYGFHPPTIYFPLI----VPEALMIEPTETESKETLDAFIAAMKQIAEEAKEN 452 (481)
T ss_pred EEEEECcc--ccccCCCHHHHHHHHH-HCCccCCccccccc----cCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 22221110 0000112446777655 56998764444322 12359999999999999999999999998876543
No 280
>PLN02590 probable tyrosine decarboxylase
Probab=99.85 E-value=1.8e-18 Score=179.05 Aligned_cols=313 Identities=12% Similarity=0.139 Sum_probs=209.8
Q ss_pred hHHHHHHHHHHHhhhCCCC---------EEEecccHHHHHhhhhhhcc-----------CCcEEEEcCCchhHHHhHhhh
Q 011567 153 IDVHLDCEARIAKFLGTPD---------SILYSYGLSTMFSAIPCFCK-----------KGDLIVADEGVHWGIQNGLYL 212 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e~---------~i~~~sG~~a~~~ai~~~~~-----------~gdiI~~~~~~h~s~~~g~~~ 212 (483)
..+..++-++|++++|.++ .++.++|++|+..++.+... +.-+|++.+..|+|+.+++.+
T Consensus 169 t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~i 248 (539)
T PLN02590 169 TELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLI 248 (539)
T ss_pred HHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHH
Confidence 4566777788888888653 57789999999887644321 233777899999999999998
Q ss_pred cCC---eEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeC
Q 011567 213 SRS---TVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDE 282 (483)
Q Consensus 213 s~~---~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DE 282 (483)
.|. .++.++.+ |+++|++.+++.... .....+|+...-..++|.+.||++|.++|++||+||+||.
T Consensus 249 lGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~----g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDa 324 (539)
T PLN02590 249 GGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAK----GFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDA 324 (539)
T ss_pred cCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhc----CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEec
Confidence 875 35554432 788999888764332 2234555555556678999999999999999999999999
Q ss_pred ccccccc-cCCCCccccccCCCCCceeEEEccccccccCC--Cce-eeccHH-HHHH-------HHhcC---------Cc
Q 011567 283 SNSFGVL-GRSGRGLTEHCGVPVDKIDIVTAAMGHALATE--GGF-CTGSAR-VVDH-------QRLSS---------SG 341 (483)
Q Consensus 283 a~s~g~l-g~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~--GG~-i~~~~~-~~~~-------~~~~~---------~~ 341 (483)
+|+++.+ -+..+.+ ..|+ +.+|-++...+|++..+ .|+ ++.++. +.+. +.... ..
T Consensus 325 A~GG~al~~~~~r~~--~~Gi--e~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d 400 (539)
T PLN02590 325 AYAGNACICPEYRKF--IDGI--ENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKD 400 (539)
T ss_pred chhhhhhcChhhHHH--hcCC--ccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccc
Confidence 9987653 2222221 2344 45688888999999722 244 444332 2222 21100 00
Q ss_pred eeecCCCcHHHHHHHHHHHHHHh--cCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHH
Q 011567 342 YVFSASLPPYLASAAITAIDVLE--ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLL 419 (483)
Q Consensus 342 ~~fs~~~~p~~~aaa~~al~~l~--~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~ 419 (483)
+....+ -.+-+.....+++.+- ...+.+++..+++++|.+.|++.+++++..++..+++++++.++....+......
T Consensus 401 ~~i~ls-Rr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~~~~~~ln 479 (539)
T PLN02590 401 WQISLS-RRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDEDQCNERN 479 (539)
T ss_pred cCCCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCCHHHHHHHH
Confidence 111112 1233333444555442 2356788888999999999999889999888888999999865432222234567
Q ss_pred HHHHHHHHHhCCEEEEeecccccccCCCCCceEEEc-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 420 EDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFV-SAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 420 ~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
.++.+++.+.+.+++++..... ...||+++ +...|++||+.+++.|.+...++-+
T Consensus 480 ~~l~~~l~~~G~~~vs~t~~~g------~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~~ 535 (539)
T PLN02590 480 RELLAAVNSTGKIFISHTALSG------KFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTR 535 (539)
T ss_pred HHHHHHHHhCCCEEEEeeEECC------EEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 7888877776667777654321 12399987 6677899999999999998776543
No 281
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.85 E-value=2.5e-19 Score=161.91 Aligned_cols=316 Identities=17% Similarity=0.214 Sum_probs=212.6
Q ss_pred HHHHHHHHHHhcCCC-----CCC-CCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCC
Q 011567 128 LLESCTSALEKYGVG-----SCG-PRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEG 201 (483)
Q Consensus 128 i~~a~~~~l~~~g~g-----~~~-~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~ 201 (483)
+.+++++++-++|-| .|+ .|.---+.++..++-+.|++|+|++.+-+.++.-++-.+++.+++++||.|++|..
T Consensus 29 Lt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~ 108 (382)
T COG1103 29 LTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALCKEGDWVVVDSL 108 (382)
T ss_pred CCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhccCCCEEEEcCc
Confidence 456677777776654 332 22222344556667777999999999888888889999999999999999999999
Q ss_pred chhHHHhHhhhcCCeEEEecCC-------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHc
Q 011567 202 VHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKY 274 (483)
Q Consensus 202 ~h~s~~~g~~~s~~~v~~~~~~-------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~ 274 (483)
.|++..-+....|.++..+++. +++...+.+++..++ +....++.++..+-++.|.+.+.++++++|++|
T Consensus 109 aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~---~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~ 185 (382)
T COG1103 109 AHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDE---GGDPPALALLTHVDGEYGNLADAKKVAKICREY 185 (382)
T ss_pred chHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhc---cCCCceEEEEeccCCCcCCchhhHHHHHHHHHc
Confidence 9999999999999999988854 577888888776554 334577888888888889999999999999999
Q ss_pred CcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC--ceeeccHHHHHHH-HhcCCce------eec
Q 011567 275 RFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG--GFCTGSARVVDHQ-RLSSSGY------VFS 345 (483)
Q Consensus 275 ~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G--G~i~~~~~~~~~~-~~~~~~~------~fs 345 (483)
|+.+++..+|+.|++.-.++ . ..+|++++|-+|+++..| |.+.-+.++.+.. |.++..| .++
T Consensus 186 gvPlllN~AYt~Grmpvs~k------e---~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellG 256 (382)
T COG1103 186 GVPLLLNCAYTVGRMPVSGK------E---IGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLG 256 (382)
T ss_pred CCceEeecceeecccccccc------c---cCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhcccccccceeeeec
Confidence 99999999999988764332 2 234999999999997544 8887788877754 3332322 122
Q ss_pred CC--CcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCC--CCCEEEEEecCCCCCchhhHHHHHH
Q 011567 346 AS--LPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNP--ESPIVFLILEKSTGSMKNDLQLLED 421 (483)
Q Consensus 346 ~~--~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~--~~~i~~l~l~~~~~~~~~~~~~~~~ 421 (483)
.+ ..|+.. ..+++-...+--..++.--+++++|.+.|.++-|+...+.. ..-++.+.-+ ...+
T Consensus 257 CT~rGapivT--lmASfP~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp-----------~f~e 323 (382)
T COG1103 257 CTVRGAPIVT--LMASFPHVVERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETP-----------VFHE 323 (382)
T ss_pred ccccCchHHH--HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCc-----------hHHH
Confidence 21 223322 22233222221123444456788898999888556544321 1223333221 0112
Q ss_pred HHHH----------HHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 422 IADW----------ALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 422 i~~~----------~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
+++. -|+++||.-... .+ ...+.+++ +.+|.|+++..++++++++.+
T Consensus 324 Iakk~~r~gyFlY~ELK~RgI~GI~~---G~-----Tk~~K~sv-yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 324 IAKKHKRKGYFLYEELKKRGIHGIQP---GQ-----TKYFKLSV-YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred HHHhCcCCceeeHHHHHhcCcccccc---Cc-----eeEEEEEe-ecCCHHHHHHHHHHHHHHHHh
Confidence 2222 244445432211 10 01266765 568999999999999998865
No 282
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.85 E-value=3.8e-19 Score=178.63 Aligned_cols=227 Identities=15% Similarity=0.184 Sum_probs=170.7
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHH----hHhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~----~g~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+||++||++.|.+.++++++|++|+..++ .+.++||.|++..+.|++.. ..+...|.++..++..|+++++
T Consensus 52 pt~~~le~~la~l~g~~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~ 130 (366)
T PRK08247 52 PTRGVLEQAIADLEGGDQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKAIE 130 (366)
T ss_pred chHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHHHH
Confidence 467899999999999999999999999998766 56788998888877776532 3445578889888888888888
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+.+ ++++|++|.+.+++|...++++|.++|++||+++|+||+|+.+.... . +. ..+|+
T Consensus 131 ~~i~~----------~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~---p------~~-~g~di 190 (366)
T PRK08247 131 QAITP----------NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR---P------LE-EGADI 190 (366)
T ss_pred Hhccc----------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC---c------hh-cCCcE
Confidence 77643 26799999999999999999999999999999999999986544321 1 11 24589
Q ss_pred EEccccccccC----CCceeecc-HHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 310 VTAAMGHALAT----EGGFCTGS-ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 310 ~~~s~~K~lg~----~GG~i~~~-~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
+++|++|.+++ .||+++++ +++.+.++.... ..+..++|+.+..+...++.+. ..+++.++++..+.+.|
T Consensus 191 ~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~--~~g~~~s~~~a~l~~~~l~tl~---~r~~~~~~~a~~l~~~L 265 (366)
T PRK08247 191 VIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQN--AAGAVLSPFDSWLLIRGMKTLA---LRMRQHEENAKAIAAFL 265 (366)
T ss_pred EEeecceeccCCCceeeeEEecChHHHHHHHHHHHH--hcCCCCChHHHHHHHhccCcHH---HHHHHHHHHHHHHHHHH
Confidence 99999999974 46888876 566665543211 1123456776666666665443 45667799999999999
Q ss_pred ccCCCcee-ecCCCCCEEEEEec
Q 011567 385 SDIHGLSI-ASNPESPIVFLILE 406 (483)
Q Consensus 385 ~~~~~~~i-~~~~~~~i~~l~l~ 406 (483)
++.+++.. ..++.+.++.+.++
T Consensus 266 ~~~p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 266 NEQPGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred HhCCCeeEEecCCcCcEEEEEEC
Confidence 98887763 33446778888774
No 283
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.85 E-value=1.5e-18 Score=175.23 Aligned_cols=309 Identities=13% Similarity=0.155 Sum_probs=205.8
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhh-ccCCcEEEEcCCchh
Q 011567 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF-CKKGDLIVADEGVHW 204 (483)
Q Consensus 126 p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~-~~~gdiI~~~~~~h~ 204 (483)
++-.+++.+.++. |. .+|..+...++++.+++++|.++++++++|++|+..++.++ .++||.|+++...|.
T Consensus 11 ~~~~~~~~~~l~~-~~-------~~g~~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~ 82 (375)
T PRK11706 11 GTELDYIQQAMSS-GK-------LCGDGGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFV 82 (375)
T ss_pred HHHHHHHHHHHHc-CC-------ccCCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcH
Confidence 3446667776665 22 34556788999999999999999999999999998877655 689999999999999
Q ss_pred HHHhHhhhcCCeEEEecC------CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEE
Q 011567 205 GIQNGLYLSRSTVVYFKH------NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRV 278 (483)
Q Consensus 205 s~~~g~~~s~~~v~~~~~------~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~l 278 (483)
++...+...|.+++.++. .|++++++.+.+ ++++|++.+ ++|...++++|.++|++||+++
T Consensus 83 ~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~----------~tk~i~~~~---~~G~~~~~~~i~~la~~~~i~v 149 (375)
T PRK11706 83 STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP----------KTRAIVPVH---YAGVACEMDTIMALAKKHNLFV 149 (375)
T ss_pred HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC----------CCeEEEEeC---CCCCccCHHHHHHHHHHcCCEE
Confidence 999999999999888763 257777776643 245555432 4698899999999999999999
Q ss_pred EEeCccccccccCCCCccccccCCCCCceeEEEcccc--ccccC--CCceeeccHHHHHHHH---hcCC-----------
Q 011567 279 FLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMG--HALAT--EGGFCTGSARVVDHQR---LSSS----------- 340 (483)
Q Consensus 279 i~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~--K~lg~--~GG~i~~~~~~~~~~~---~~~~----------- 340 (483)
|+|++|++|... .|+.... + .|+-+.|++ |.+++ .|++++.++++.+.++ ..+.
T Consensus 150 IeD~a~a~g~~~-~~~~~g~-~------~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 221 (375)
T PRK11706 150 VEDAAQGVMSTY-KGRALGT-I------GHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVD 221 (375)
T ss_pred EEECcccccccc-CCeeeec-C------cCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCC
Confidence 999999987521 1222111 1 155555665 99953 2345666777776433 2210
Q ss_pred c-----eeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCC--C-ceeec-CC----CCCEEEEEecC
Q 011567 341 G-----YVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIH--G-LSIAS-NP----ESPIVFLILEK 407 (483)
Q Consensus 341 ~-----~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~--~-~~i~~-~~----~~~i~~l~l~~ 407 (483)
. ..++.-++.+.++.+.+.++.++ +..++.+++.+++++.|.+++ + +.+.. ++ ..+++++.+.+
T Consensus 222 ~~~~~~~g~~~~~~~~~aa~~~~ql~~l~---~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (375)
T PRK11706 222 KYTWVDIGSSYLPSELQAAYLWAQLEAAD---RINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRD 298 (375)
T ss_pred cceeeecccccCcCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECC
Confidence 0 01222356777777777777764 366777788888888887764 2 33211 11 12355555532
Q ss_pred CCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc-----cc-----CCCCC-------ceEEEccCCCCHHHHHHHHHH
Q 011567 408 STGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML-----DK-----CRLPV-------GIRLFVSAAHSEADLVKACES 470 (483)
Q Consensus 408 ~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~-----~~-----~~~~~-------~lRi~~~~~~t~edi~~~~~~ 470 (483)
.. ...++.+. |.++||.+.....|.. .+ ...|. .|.+.++..+|++|++.++++
T Consensus 299 ~~--------~r~~l~~~-L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~ 369 (375)
T PRK11706 299 LE--------DRSALINF-LKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDT 369 (375)
T ss_pred cC--------CHHHHHHH-HHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHH
Confidence 10 12255664 5566998764322211 01 11121 277778888999999999999
Q ss_pred HHHHH
Q 011567 471 LKRIS 475 (483)
Q Consensus 471 l~~~~ 475 (483)
|++++
T Consensus 370 i~~~~ 374 (375)
T PRK11706 370 ILEFF 374 (375)
T ss_pred HHHHh
Confidence 98764
No 284
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.85 E-value=3.8e-19 Score=181.08 Aligned_cols=321 Identities=15% Similarity=0.132 Sum_probs=200.8
Q ss_pred eEEEeecCCC---CCCCC-ChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----C---CCCE---EEe
Q 011567 110 EVVNFASANY---LGLIG-HEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G---TPDS---ILY 175 (483)
Q Consensus 110 ~~id~~s~~~---lG~~~-~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g---~e~~---i~~ 175 (483)
.+|||+.+.+ -+... .+.+.+++.+.++..... .|+...-..+|++.+++++ + .++. +++
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~------~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT 100 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTK------NYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQT 100 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccccCC------CcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEec
Confidence 4688888732 11212 356777777665432111 1222222345666666654 2 1233 344
Q ss_pred cccHHHHHhhhhhh--ccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC-------CCHHHHHHHHHHhhhhhhhccCcc
Q 011567 176 SYGLSTMFSAIPCF--CKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTADNKRAKKLR 246 (483)
Q Consensus 176 ~sG~~a~~~ai~~~--~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~-------~d~~~Le~~l~~~~~~~~~~~~~~ 246 (483)
+++.+|+..+++++ +.+||.|+++++++..+...++..|.+++.++. -|++++++.+++... ++
T Consensus 101 ~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~-------~~ 173 (396)
T PRK09257 101 PGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPA-------GD 173 (396)
T ss_pred CCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCC-------CC
Confidence 55568888888766 479999999999999999999999999988764 156777777654322 25
Q ss_pred EEEEEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCC--CCccccccCCCCCceeEEEccccccccCC
Q 011567 247 RYIVVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRS--GRGLTEHCGVPVDKIDIVTAAMGHALATE 321 (483)
Q Consensus 247 ~~iv~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~--G~g~~~~~~v~~~~~Di~~~s~~K~lg~~ 321 (483)
+++++...+|++|.+.+ +++|+++|++||+++|.||+|+....+.. -..+....+. .+..|+++||||+++..
T Consensus 174 ~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~--~~~vi~i~SfSK~~~~~ 251 (396)
T PRK09257 174 VVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAA--GLELLVASSFSKNFGLY 251 (396)
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhc--CCcEEEEEEcCCcCccc
Confidence 67777889999999988 78899999999999999999976433200 0011111111 12358889999999876
Q ss_pred C---ceee---ccHH----HHHHHHhcCCceeecCCCcHHHHHHHHHHHHH-------HhcCcHHHHHHHHHHHHHHHhh
Q 011567 322 G---GFCT---GSAR----VVDHQRLSSSGYVFSASLPPYLASAAITAIDV-------LEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 322 G---G~i~---~~~~----~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~-------l~~~~~~~~~l~~~~~~l~~~L 384 (483)
| ||++ .+++ +++.++..... .++. .+++...++.+.++. .+...+.++.++++.+.+.+.|
T Consensus 252 GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L 329 (396)
T PRK09257 252 GERVGALSVVAEDAEEADRVLSQLKATIRT-NYSN-PPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEAL 329 (396)
T ss_pred cccceeEEEEeCCHHHHHHHHHHHHHHhhh-hcCC-CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 9986 3443 33333222111 1221 234444444433321 1112346777888888899888
Q ss_pred ccCC---CceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCH
Q 011567 385 SDIH---GLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSE 461 (483)
Q Consensus 385 ~~~~---~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ 461 (483)
++.. ++.+..+.++.++++.+. + +.+.+++++.||.+.+ . .||+++. .++
T Consensus 330 ~~~~~~~~~~~~~p~gg~~~w~~l~--------~-----~~~~~l~~~~~V~~~p------------~-~ri~~~~-~~~ 382 (396)
T PRK09257 330 KAKGPSRDFDFIARQRGMFSYSGLT--------P-----EQVDRLREEFGVYAVG------------S-GRINVAG-LNE 382 (396)
T ss_pred HhcCCCCCcccccccceEEEecCCC--------H-----HHHHHHHHcCCEEEcC------------C-CeEEEee-CCH
Confidence 8762 244444445556666551 1 2345566778998854 1 2888854 899
Q ss_pred HHHHHHHHHHHHH
Q 011567 462 ADLVKACESLKRI 474 (483)
Q Consensus 462 edi~~~~~~l~~~ 474 (483)
++|+++++.|+++
T Consensus 383 ~~i~~~~~~i~~~ 395 (396)
T PRK09257 383 SNIDYVAEAIAAV 395 (396)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999875
No 285
>PLN03032 serine decarboxylase; Provisional
Probab=99.85 E-value=1.4e-18 Score=172.82 Aligned_cols=309 Identities=14% Similarity=0.064 Sum_probs=210.6
Q ss_pred hHHHHHHHHHHHh-cCCCCCCCCCcccChHHHHHHHHHHHhhhCCC--C--EEEecccHHHHHhhhhhhc--cCCcEEEE
Q 011567 126 EKLLESCTSALEK-YGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--D--SILYSYGLSTMFSAIPCFC--KKGDLIVA 198 (483)
Q Consensus 126 p~i~~a~~~~l~~-~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e--~--~i~~~sG~~a~~~ai~~~~--~~gdiI~~ 198 (483)
+.+.+++.+.+.+ +|..+..+..-..+.+...++.+.+++++|.+ + .++.++|+++|..++.+.. .++.+|++
T Consensus 37 ~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~ 116 (374)
T PLN03032 37 YGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYA 116 (374)
T ss_pred hHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEe
Confidence 3445555555442 33322221111134578889999999999964 3 3777899999998876543 24568999
Q ss_pred cCCchhHHHhHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHH
Q 011567 199 DEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEK 273 (483)
Q Consensus 199 ~~~~h~s~~~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k 273 (483)
+...|.|+.++++..+..+..++.+ |+++|++.+++... .+.+|++....+++|.+.|+++|.++|++
T Consensus 117 s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~-------~~~lvv~tagtt~tG~idpi~eI~~i~~~ 189 (374)
T PLN03032 117 SRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDDLERALAKNRD-------KPAILNVNIGTTVKGAVDDLDRILRILKE 189 (374)
T ss_pred CCCceeHHHHHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcCC-------CCEEEEEEecCcCCccCCCHHHHHHHHHH
Confidence 9999999999998887766555433 78999998875321 25677777777889999999999999999
Q ss_pred cC-----cEEEEeCccccccccCCCCccccccCCCCCceeEEEcccccccc-CCC-ceeeccHHHHHHHHhcCCce----
Q 011567 274 YR-----FRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA-TEG-GFCTGSARVVDHQRLSSSGY---- 342 (483)
Q Consensus 274 ~~-----~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg-~~G-G~i~~~~~~~~~~~~~~~~~---- 342 (483)
|| +++++|.+++++.+.-... ...++.. ..+|.++.|.+|.+| +.| |+++.++...+.+... ..|
T Consensus 190 ~g~~~~~~~lHvDaA~gg~~~p~~~~--~~~~~~~-~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~~-~~Yl~~~ 265 (374)
T PLN03032 190 LGYTEDRFYIHCDGALFGLMMPFVSR--APEVTFR-KPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQN-VEYLNSR 265 (374)
T ss_pred hCCCCCCeeEEEEccchhhhhhccCC--CcccCCC-cCCcEEEECcccccCCCcCeEEEEEEchhhHhhccC-CcccCCC
Confidence 96 5999999998876532110 1112222 347999999999998 656 7776666665544321 222
Q ss_pred --eecCCCcHHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHH
Q 011567 343 --VFSASLPPYLASAAITAIDVLEE--NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQL 418 (483)
Q Consensus 343 --~fs~~~~p~~~aaa~~al~~l~~--~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~ 418 (483)
+..++-+...++++..+++.+-. ..+..++..++++++.+.|++. ++++..++.++++.+.-+. +
T Consensus 266 d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~V~f~~~~-------~--- 334 (374)
T PLN03032 266 DATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSSTVVFERPM-------D--- 334 (374)
T ss_pred CCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceEEEEcCCC-------c---
Confidence 33344444555566666766532 2467888899999999999885 8887667777777665421 0
Q ss_pred HHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHH
Q 011567 419 LEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 419 ~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
+ .+.+ |..+.+. +..+|+++...+|++.+|++++-|++
T Consensus 335 -----~-~~~~-~w~l~~~----------~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 335 -----E-AFIK-KWQLACE----------GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred -----H-hHhh-eeeeccc----------CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 1 1223 5655532 13489999998999999999988875
No 286
>PLN02271 serine hydroxymethyltransferase
Probab=99.85 E-value=1.1e-18 Score=176.92 Aligned_cols=336 Identities=16% Similarity=0.126 Sum_probs=219.9
Q ss_pred eeEEEeecC-CCCCCCCChHHHHHHHHHHH-hcCCCCCCCCCcccChHHHHHH----HHHHHhhhCCCC----E-EEecc
Q 011567 109 KEVVNFASA-NYLGLIGHEKLLESCTSALE-KYGVGSCGPRGFYGTIDVHLDC----EARIAKFLGTPD----S-ILYSY 177 (483)
Q Consensus 109 ~~~id~~s~-~~lG~~~~p~i~~a~~~~l~-~~g~g~~~~~~~~g~~~~~~~l----~~~La~~~g~e~----~-i~~~s 177 (483)
++.|++..+ || ..|.+.++.-..+. +|..|.+|.|.+.|+. ...++ .++..++||.+. + +-.-|
T Consensus 148 ~~~l~LIASEN~----~S~av~~algS~ltnkYaEG~pG~Ryy~G~~-~iD~iE~la~era~~lF~~~~~~~gaNVQp~S 222 (586)
T PLN02271 148 FKGIELIASENF----VCRAVMEALGSHLTNKYSEGMPGARYYTGNQ-YIDQIERLCCERALAAFGLDSEKWGVNVQPYS 222 (586)
T ss_pred hcCeeecccccc----CCHHHHHHhcCcccccCCCCCCCCcCCCCCh-hHHHHHHHHHHHHHHHhCCcccccccceeecc
Confidence 356777665 65 55788888776664 5889999998665554 22333 455666788654 2 33469
Q ss_pred cHHHHHhhhhhhccCCcEEEEcCCchhHHHh-H--------hhhcCCe--EEEecCC------CHHHHHHHHHHhhhhhh
Q 011567 178 GLSTMFSAIPCFCKKGDLIVADEGVHWGIQN-G--------LYLSRST--VVYFKHN------DMDSLRNTLERVTADNK 240 (483)
Q Consensus 178 G~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~-g--------~~~s~~~--v~~~~~~------d~~~Le~~l~~~~~~~~ 240 (483)
|+.|+.+++.++.++||.|+.-+..|+.... + +..++.. ++.|+.+ |++++++.....
T Consensus 223 Gs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~----- 297 (586)
T PLN02271 223 CTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDF----- 297 (586)
T ss_pred HHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhc-----
Confidence 9999999999999999999886555544322 1 1223332 3344443 788888765442
Q ss_pred hccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccc-c
Q 011567 241 RAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-A 319 (483)
Q Consensus 241 ~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~l-g 319 (483)
++++|++.+.... ...|+++++++|+++|++|++|.+|..|.+.. +.. ..+...+|++++|.+|+| |
T Consensus 298 ----rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~---g~~---~sP~~~aDvvt~TTHKtLrG 365 (586)
T PLN02271 298 ----RPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAA---KEC---VNPFDYCDIVTSTTHKSLRG 365 (586)
T ss_pred ----CCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECccccccccc---CcC---CCCCcCCcEEEeCCcccCCC
Confidence 3678888664333 56789999999999999999999999987752 221 111235699999999999 7
Q ss_pred CCCceeeccHH--------------------HHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHh--cCcHHHHHHHHHH
Q 011567 320 TEGGFCTGSAR--------------------VVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE--ENPDLITKLKKNT 377 (483)
Q Consensus 320 ~~GG~i~~~~~--------------------~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~--~~~~~~~~l~~~~ 377 (483)
+.||+++.+++ +.+.+...-.+...++..+. ..++...+++... +..+..+++.+|+
T Consensus 366 PrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~-~IAalAvalkea~~~efk~Ya~QVv~NA 444 (586)
T PLN02271 366 PRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNN-HIAALAIALKQVATPEYKAYMQQVKKNA 444 (586)
T ss_pred CCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHH-HHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 88998876653 22223222222122222222 2333334565443 2256888999999
Q ss_pred HHHHHhhccCCCceeec-CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEcc
Q 011567 378 AILRTGLSDIHGLSIAS-NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVS 456 (483)
Q Consensus 378 ~~l~~~L~~~~~~~i~~-~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~ 456 (483)
+.|.+.|.+. |+++.+ ..++.++.+.+.... .+. +.+.+.|++-||.+.....|.-.....|+||||..+
T Consensus 445 kaLA~~L~~~-G~~vv~ggTdnHlvLvDl~~~g----~~G----~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~ 515 (586)
T PLN02271 445 QALASALLRR-KCRLVTGGTDNHLLLWDLTTLG----LTG----KNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTP 515 (586)
T ss_pred HHHHHHHHHC-CCeEeeCCCCcceeeecCcccC----CCH----HHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCH
Confidence 9999999885 999764 345667777764321 011 345556777789887654443222224678999654
Q ss_pred C----CCCHHHHHHHHHHHHHHHH
Q 011567 457 A----AHSEADLVKACESLKRISA 476 (483)
Q Consensus 457 ~----~~t~edi~~~~~~l~~~~~ 476 (483)
. .+.++|++++.+.|.++++
T Consensus 516 alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 516 AMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred HHHhcCCCcHHHHHHHHHHHHHHh
Confidence 3 4568999999999998876
No 287
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=1e-18 Score=177.05 Aligned_cols=212 Identities=14% Similarity=0.142 Sum_probs=160.9
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHh----HhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~----g~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+|+++||++.|.++++++++|++|+..++.++.++||.|++..+.|+.... .+...+.++..++..|+++++
T Consensus 60 p~~~~Le~~lA~l~g~~~~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~ 139 (405)
T PRK08776 60 PTRDLLGEALAELEGGAGGVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRSLA 139 (405)
T ss_pred hHHHHHHHHHHHHhCCCceEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHHHH
Confidence 4568899999999999999999999999999999999999999988887766332 233446777777777888887
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.++. ++++|+++.+.|++|.+.++++|+++|++||+++|+||+|..+..- +.+ + ..+|+
T Consensus 140 ~~i~~----------~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~---~pl-~------~gaDi 199 (405)
T PRK08776 140 DALAQ----------SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQ---KPL-E------FGADL 199 (405)
T ss_pred HhcCc----------CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccC---Ccc-c------ccCCE
Confidence 76642 2678899999999999999999999999999999999999754211 111 1 23489
Q ss_pred EEccccccccCC----Cceeec-cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 310 VTAAMGHALATE----GGFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 310 ~~~s~~K~lg~~----GG~i~~-~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
++.|.+|.+++. ||++++ ++++.+.++..... .+..++|+.+..+...++.++ .+.++..+|...+.+.|
T Consensus 200 vv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~--~g~~~s~~~a~l~~~gl~tl~---~r~~~~~~na~~la~~L 274 (405)
T PRK08776 200 VLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANA--LGLTGSPFDAFLTLRGLRTLD---ARLRVHQENADAIAALL 274 (405)
T ss_pred EEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHh--cCCCCCHHHHHHHHhhhCcHH---HHHHHHHHHHHHHHHHH
Confidence 999999999743 466654 56776665432211 122457888888877776663 47888899999999999
Q ss_pred ccCCCc
Q 011567 385 SDIHGL 390 (483)
Q Consensus 385 ~~~~~~ 390 (483)
++.+.+
T Consensus 275 ~~~p~v 280 (405)
T PRK08776 275 DGHAAV 280 (405)
T ss_pred HcCCCe
Confidence 877643
No 288
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.84 E-value=5e-18 Score=160.62 Aligned_cols=334 Identities=18% Similarity=0.193 Sum_probs=229.3
Q ss_pred eeEEEeecCC---CCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhC--------CCCEEEecc
Q 011567 109 KEVVNFASAN---YLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG--------TPDSILYSY 177 (483)
Q Consensus 109 ~~~id~~s~~---~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g--------~e~~i~~~s 177 (483)
|++|-+..++ |-.+...++..+|+.++++..-.+ .|+...-+...++++|+++. .++++++++
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N------~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsG 134 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGN------GYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSG 134 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCC------CcCCccccHHHHHHHHHHhhcCCCCccCcCceEEecc
Confidence 5788888873 344556789999999999862221 23334445677888888853 357788889
Q ss_pred cHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC---C----CHHHHHHHHHHhhhhhhhccCccEEEE
Q 011567 178 GLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH---N----DMDSLRNTLERVTADNKRAKKLRRYIV 250 (483)
Q Consensus 178 G~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~---~----d~~~Le~~l~~~~~~~~~~~~~~~~iv 250 (483)
+++|++.++.+++++|.-|+++++.+.-+..-...++..+++|+. + |++.+|.++.+ ++++++
T Consensus 135 C~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DE----------NT~Aiv 204 (447)
T KOG0259|consen 135 CSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADE----------NTVAIV 204 (447)
T ss_pred chHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhcc----------CeeEEE
Confidence 999999999999999999999999887666666677888888753 2 67778777755 355666
Q ss_pred EecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccc---cccCCCCCceeEEEccccccccCCC--
Q 011567 251 VEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT---EHCGVPVDKIDIVTAAMGHALATEG-- 322 (483)
Q Consensus 251 ~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~---~~~~v~~~~~Di~~~s~~K~lg~~G-- 322 (483)
+....++.|.+.. |++|+++|+|+|+.+|.||+|...++|. ..+. +.-.+-| .|.+|+++|.+=.+|
T Consensus 205 viNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~--~pfvpmg~fssiVP---VitlggisKrW~VPGWR 279 (447)
T KOG0259|consen 205 VINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGD--KPFVPMGKFSSIVP---VITLGGISKRWIVPGWR 279 (447)
T ss_pred EeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCC--CCccchhhccccCc---eEeecccccccccCCce
Confidence 6666677788766 9999999999999999999999888875 3222 2222333 688899999997666
Q ss_pred -ceeec--------cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcC-----cHHHHHHHHHHHHHHHhhccCC
Q 011567 323 -GFCTG--------SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEEN-----PDLITKLKKNTAILRTGLSDIH 388 (483)
Q Consensus 323 -G~i~~--------~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~-----~~~~~~l~~~~~~l~~~L~~~~ 388 (483)
||++- +..+++.+..... -...|+....+|+-. ++++. .....-++.+.+.-.+.|+++|
T Consensus 280 lGWi~~hD~~gvf~~~~~~q~~~~~~~----~~~~p~TiiQ~AlP~--IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP 353 (447)
T KOG0259|consen 280 LGWIALHDPRGVFRDTKVVQGIKNFLD----IIPGPATIIQGALPD--ILEKTPEEFFDKKLSFLKSNADLCYSRLKDIP 353 (447)
T ss_pred eeeEEEecccccccchHHHHHHHHHHh----ccCCccHhHHHHhHH--HHHhChHHHHHHHHHHHHhhHHHHHHHHhcCC
Confidence 88643 2233333332211 112344444444432 23322 2467778899999999999999
Q ss_pred CceeecCCCCC-EEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHH
Q 011567 389 GLSIASNPESP-IVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKA 467 (483)
Q Consensus 389 ~~~i~~~~~~~-i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~ 467 (483)
++.....+.+. ...+.+.-..- .+-+.-.+++.++.++..+++.|+..... ++.+|+++. ...+.++++
T Consensus 354 ~l~cp~kPeg~mylmv~l~~s~~---~~~~dD~dFc~kL~~Eesv~~LPG~af~~-----~nw~Ri~i~--~~~~~leea 423 (447)
T KOG0259|consen 354 CLTCPVKPEGCMYLMVKLNLSLF---PDIEDDVDFCQKLAREESVICLPGQAFGL-----KNWLRIVIT--VEEEMLEEA 423 (447)
T ss_pred CcccCcCCCcceEEEeccchhhh---ccccccHHHHHHHhhhcceEEeccccccC-----CCeEEEEEc--cChHHHHHH
Confidence 98854444444 44444422100 01111236777777778899988765543 455999886 577999999
Q ss_pred HHHHHHHHHHHH
Q 011567 468 CESLKRISAVVL 479 (483)
Q Consensus 468 ~~~l~~~~~~~~ 479 (483)
+++|+++..+..
T Consensus 424 ~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 424 FSRIKEFCDRHS 435 (447)
T ss_pred HHHHHHHHHhhh
Confidence 999999987654
No 289
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=5.6e-19 Score=178.62 Aligned_cols=291 Identities=12% Similarity=0.086 Sum_probs=193.8
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHh----HhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~----g~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+||++++++.|.+.+++++||++|+..++.+++++||.|+++.+.|..+.. .+...|.++..++..+.++++
T Consensus 65 pt~~~Le~~lA~l~g~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~l~ 144 (394)
T PRK07050 65 PTSLALAQRLAEIEGGRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAGIA 144 (394)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHHHH
Confidence 4468999999999999999999999999999999999999999999988877553 345568888888766666777
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.++. ++++|++|.+.+++|.+.++++|+++|+++|+++|+|++|+.+..- +++ . ..+|+
T Consensus 145 ~~i~~----------~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~---~~l----~---~GaDi 204 (394)
T PRK07050 145 DLIQP----------NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAF---KPF----E---HGVDI 204 (394)
T ss_pred HhcCC----------CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccccccc---CHH----H---cCCeE
Confidence 66532 3789999999999999999999999999999999999999876432 111 1 13489
Q ss_pred EEccccccccC----CCce-eeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 310 VTAAMGHALAT----EGGF-CTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 310 ~~~s~~K~lg~----~GG~-i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
++.|++|.++. .||. +++++++.+.++.... ..+.+++|..+..++..++ ......++..+++..+.+.|
T Consensus 205 ~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~--~~G~~~~~~~a~l~lr~l~---tl~~Rl~~~~~~a~~la~~L 279 (394)
T PRK07050 205 SVQALTKYQSGGSDVLMGATITADAELHAKLKLARM--RLGIGVSADDCSLVLRGLP---SLQVRLAAHDRSALEVAEWL 279 (394)
T ss_pred EEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHH--hcCCCCCHHHHHHHHcCCC---cHHHHHHHHHHHHHHHHHHH
Confidence 99999999963 2554 4557777776653321 1244566766654444333 33346677777888888888
Q ss_pred ccCCCceeec-----------------CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc-----
Q 011567 385 SDIHGLSIAS-----------------NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML----- 442 (483)
Q Consensus 385 ~~~~~~~i~~-----------------~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~----- 442 (483)
++.+++..+. ...+.++.+.++... ......++.+. |+..++.++-+...++
T Consensus 280 ~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~-----~~~~~~~~~~~-l~~~~~~~s~G~~~sl~~~~~ 353 (394)
T PRK07050 280 KARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERY-----SPAQVDAFVEA-LELFAIGWSWGGACSLAMPYD 353 (394)
T ss_pred HhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCC-----CHHHHHHHHHc-CCCCeeccccCCccceEeeCc
Confidence 8765432111 112446777774321 12234455553 4433333322221111
Q ss_pred ------ccCCCC-CceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 443 ------DKCRLP-VGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 443 ------~~~~~~-~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
.....+ .-||+++.. ||.|.+++-|++++..++
T Consensus 354 ~~~~~~~~~~~~~~~iR~svGl----E~~~dl~~dl~~al~~~~ 393 (394)
T PRK07050 354 VASMRTAKWPHRGTLVRLYIGL----EDEADLIADLEQALEAAL 393 (394)
T ss_pred ccccchhhcCCCCCEEEEEeCc----CCHHHHHHHHHHHHHHhh
Confidence 001111 239999976 556666666666665543
No 290
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=4.3e-19 Score=180.82 Aligned_cols=214 Identities=18% Similarity=0.233 Sum_probs=160.1
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHh----hhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL----YLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~----~~s~~~v~~~~~~d~~~Le 229 (483)
+...+|+++||++.|.+.++++++|++|+..++.++.++||.|+++...|+.....+ ...+.++..++.+|+++++
T Consensus 58 pt~~~Le~~lA~l~g~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~le 137 (425)
T PRK06084 58 PTNDVLEQRVAALEGGVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAALE 137 (425)
T ss_pred chHHHHHHHHHHHhCCCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHHH
Confidence 456799999999999999999999999999999999999998888877665444333 2345677778888999998
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+++ ++++|++|++.+++|.+.|+++|.++|++||+++|+|++++.+.... . .. ..+|+
T Consensus 138 ~ai~~----------~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~~---p----~~---~gaDi 197 (425)
T PRK06084 138 ALIDE----------RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLCR---P----FE---HGADI 197 (425)
T ss_pred HHhcc----------CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCC---h----hh---cCCCE
Confidence 88754 26788999999999999999999999999999999999998654321 1 11 23489
Q ss_pred EEccccccccCC----CceeeccHHH--HHH------HHh-------------c-----------CCceeecCCCcHHHH
Q 011567 310 VTAAMGHALATE----GGFCTGSARV--VDH------QRL-------------S-----------SSGYVFSASLPPYLA 353 (483)
Q Consensus 310 ~~~s~~K~lg~~----GG~i~~~~~~--~~~------~~~-------------~-----------~~~~~fs~~~~p~~~ 353 (483)
++.|++|.+++. ||+++.+... .+. ++. . ...-.+++.++|+.|
T Consensus 198 vv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a 277 (425)
T PRK06084 198 VVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNA 277 (425)
T ss_pred EEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHH
Confidence 999999999743 5766653321 000 000 0 000123456788888
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCc
Q 011567 354 SAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 390 (483)
Q Consensus 354 aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~ 390 (483)
..++..++.+ +.+.++..+++..+.+.|++.+++
T Consensus 278 ~l~lrgl~tl---~~R~~~~~~na~~la~~L~~~p~v 311 (425)
T PRK06084 278 FLILQGLETL---ALRMERHTENALKVARYLQQHPQV 311 (425)
T ss_pred HHHHcCcCcH---HHHHHHHHHHHHHHHHHHHhCCCc
Confidence 8777776655 457888889999999999887754
No 291
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.84 E-value=7e-19 Score=177.20 Aligned_cols=285 Identities=16% Similarity=0.150 Sum_probs=193.3
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhH----hhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG----LYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g----~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+||+++++++|.+.++++++|++|+..++. +.++||.|++....|.++... +...|.++..++..|+++++
T Consensus 47 p~~~~le~~la~l~g~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le 125 (378)
T TIGR01329 47 PTRTALESLLAKLDKADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVK 125 (378)
T ss_pred hHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHH
Confidence 4578999999999999999999999998887665 779999999988888765442 34568889888888888888
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.++. ++++|++|.+.+++|.+.|+++|+++|++||+++|+|++++.+... +. .+ ..+|+
T Consensus 126 ~~i~~----------~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~---~~----l~---~g~Di 185 (378)
T TIGR01329 126 AALGP----------KTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLC---NP----LE---LGADI 185 (378)
T ss_pred HhcCc----------CceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccC---Ch----hh---cCCcE
Confidence 77742 3789999999999999999999999999999999999998654321 11 11 13489
Q ss_pred EEccccccccCC----Cceeec-cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 310 VTAAMGHALATE----GGFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 310 ~~~s~~K~lg~~----GG~i~~-~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
+++|++|++++. ||+++. ++++.+.++.... ..+..++|..+..+...++ ..+.++++..+++..+.+.|
T Consensus 186 ~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~--~~G~~~~~~~a~l~~~~l~---tl~~R~e~~~~na~~la~~L 260 (378)
T TIGR01329 186 VYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQN--STGSGLAPFDCWLLLRGIK---TLAIRIEKQQENARAIAMFL 260 (378)
T ss_pred EEEecceeccCCccceeEEEEeCcHHHHHHHHHHHH--hcCCcCCHHHHHHHHccCC---CHHHHHHHHHHHHHHHHHHH
Confidence 999999999642 677765 5555454442211 1234456776655444443 33457788888888888888
Q ss_pred ccCCCce--------------eec---CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc-----
Q 011567 385 SDIHGLS--------------IAS---NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML----- 442 (483)
Q Consensus 385 ~~~~~~~--------------i~~---~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~----- 442 (483)
++.+.+. +.. ...++++.|.+.+ .....++++. |+..++.++.+...++
T Consensus 261 ~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~--------~~~~~~~~~~-L~~~~i~~s~G~~~sl~~~p~ 331 (378)
T TIGR01329 261 STHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS--------VALSKRLVEA-TKLFSITVSFGSVNSLISMPC 331 (378)
T ss_pred HhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC--------HHHHHHHHHh-CcCcccccCCCCCCceeeCCC
Confidence 7654321 111 1245688888721 2224466664 4544555544333221
Q ss_pred --ccC----------CCCC-ceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 443 --DKC----------RLPV-GIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 443 --~~~----------~~~~-~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
.+. ..++ -||+++.. ||.+.+++-|++++.+
T Consensus 332 ~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 332 FMSHASIPAEVREERGLPEDLVRLSVGI----EDVDDLISDLDIAFVT 375 (378)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence 011 1122 39999976 5566666666666653
No 292
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.84 E-value=3.1e-18 Score=172.25 Aligned_cols=309 Identities=16% Similarity=0.188 Sum_probs=203.7
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhh-ccCCcEEEEcCCchh
Q 011567 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF-CKKGDLIVADEGVHW 204 (483)
Q Consensus 126 p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~-~~~gdiI~~~~~~h~ 204 (483)
++..+++.+.+.. |. .+|..+...++++.+++++|.+.++++++|++|+..++.++ .++||.|+++...|.
T Consensus 11 ~~e~~a~~~~~~~-~~-------~~~~g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~ 82 (376)
T TIGR02379 11 GQELEYIAEAISE-GK-------LSGDGPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFV 82 (376)
T ss_pred HHHHHHHHHHHHc-CC-------ccCCcHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcH
Confidence 4557778877765 22 33445678999999999999999999999999999888887 789999999999999
Q ss_pred HHHhHhhhcCCeEEEecCC------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEE
Q 011567 205 GIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRV 278 (483)
Q Consensus 205 s~~~g~~~s~~~v~~~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~l 278 (483)
++...+...|.+++.++.+ |++++++.++. ++++|+.. +.+|...++++|.++|++||+++
T Consensus 83 ~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~----------~tk~Iip~---~~~G~~~d~~~I~~la~~~~i~v 149 (376)
T TIGR02379 83 STANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH----------RTKAIVPV---HYAGVACDMDTIMALANKHQLFV 149 (376)
T ss_pred HHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc----------CceEEEEe---CCCCCccCHHHHHHHHHHCCCEE
Confidence 9988888889998887643 55666665532 25666533 34699999999999999999999
Q ss_pred EEeCccccccccCCCCccccccCCCCCceeEEEcccc--cccc--CCCceeec-cHHHHHHHHh---cCC----------
Q 011567 279 FLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMG--HALA--TEGGFCTG-SARVVDHQRL---SSS---------- 340 (483)
Q Consensus 279 i~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~--K~lg--~~GG~i~~-~~~~~~~~~~---~~~---------- 340 (483)
|+|++|++|.. -.|+.. |.- .|+.+.||+ |.+. +.||+++. ++++.+.++. .+.
T Consensus 150 IeDaa~~~g~~-~~~~~~----g~~---~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 221 (376)
T TIGR02379 150 IEDAAQGVMST-YKGRAL----GSI---GHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEV 221 (376)
T ss_pred EEECccccCCc-cCCccc----CCC---CCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCC
Confidence 99999998752 112211 111 155555653 6564 36787655 4777766542 111
Q ss_pred -ce-----eecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCC--C-ceee--cCCCC---CEEEEEec
Q 011567 341 -GY-----VFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIH--G-LSIA--SNPES---PIVFLILE 406 (483)
Q Consensus 341 -~~-----~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~--~-~~i~--~~~~~---~i~~l~l~ 406 (483)
.+ .+..-++.+.++.+++.|+.+++ ..++-+++.++..+.|..++ + ..+. .+... .++.+.+.
T Consensus 222 ~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~---~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 298 (376)
T TIGR02379 222 DKYTWRDIGSSYLPSELQAAYLWAQLEQADR---INQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLK 298 (376)
T ss_pred CcceeeeecccCCccHHHHHHHHHHHHHhHH---HHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEEC
Confidence 01 12223567777777777877754 56666677777777776643 1 2221 11111 23445553
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc--c---c-----CCCC-------CceEEEccCCCCHHHHHHHHH
Q 011567 407 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML--D---K-----CRLP-------VGIRLFVSAAHSEADLVKACE 469 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~--~---~-----~~~~-------~~lRi~~~~~~t~edi~~~~~ 469 (483)
... ...++.+. |+++||.++....|.. + . ...| ..|.+.++..+|++|++++++
T Consensus 299 ~~~--------~r~~l~~~-L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~ 369 (376)
T TIGR02379 299 DED--------DRNELIKY-LKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQ 369 (376)
T ss_pred CcC--------CHHHHHHH-HHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHH
Confidence 210 12255654 5667998764322111 0 0 0111 138888888999999999999
Q ss_pred HHHHHH
Q 011567 470 SLKRIS 475 (483)
Q Consensus 470 ~l~~~~ 475 (483)
+|++++
T Consensus 370 ~i~~~~ 375 (376)
T TIGR02379 370 TICDYL 375 (376)
T ss_pred HHHHHh
Confidence 998864
No 293
>PRK07049 methionine gamma-lyase; Validated
Probab=99.84 E-value=9.4e-19 Score=178.58 Aligned_cols=217 Identities=16% Similarity=0.175 Sum_probs=166.8
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHh----hhcCCeEEEec-CCCHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL----YLSRSTVVYFK-HNDMDSL 228 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~----~~s~~~v~~~~-~~d~~~L 228 (483)
+....|++.||++.|.++++++++|.+|+..++.+++++||.|+++.+.++.+...+ ...|.+++.+. ..|.+++
T Consensus 83 Pt~~~Le~~lA~leg~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l 162 (427)
T PRK07049 83 PNSEIVEDRLAVYEGAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAI 162 (427)
T ss_pred cCHHHHHHHHHHHhCCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHH
Confidence 446799999999999999999999999999999999999999999998887765443 44577755554 4577888
Q ss_pred HHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHH------cCcEEEEeCccccccccCCCCccccccCC
Q 011567 229 RNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEK------YRFRVFLDESNSFGVLGRSGRGLTEHCGV 302 (483)
Q Consensus 229 e~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k------~~~~li~DEa~s~g~lg~~G~g~~~~~~v 302 (483)
++.+++.... .++++|++|.++|++|.+.++++|.+++++ +++++|+||++..... . +. +
T Consensus 163 ~~~l~~~~~~-----~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~-~--~p------l 228 (427)
T PRK07049 163 GAAAEAAAAK-----GRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVF-Q--KP------L 228 (427)
T ss_pred HHHHHhhccC-----CCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccccc-C--Cc------c
Confidence 8777543211 137899999999999999999999999988 8999999999753221 1 11 1
Q ss_pred CCCceeEEEccccccccC----CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Q 011567 303 PVDKIDIVTAAMGHALAT----EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTA 378 (483)
Q Consensus 303 ~~~~~Di~~~s~~K~lg~----~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~ 378 (483)
. ...|+++.|++|.+|+ .+||+++++++++.++... ..++..++|..+.++...++.+ ...+++..++++
T Consensus 229 ~-~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~--~~~g~~ls~~~a~l~~r~L~tl---~~R~~~~~~~a~ 302 (427)
T PRK07049 229 E-HGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALR--SAIGTQLDPHSCWMLGRSLETL---VLRMERANRNAR 302 (427)
T ss_pred c-cCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHH--HhcCCCCCHHHHHHHHcCCChH---HHHHHHHHHHHH
Confidence 1 2348999999999984 3589999999888776432 2345567888888887777654 335677788999
Q ss_pred HHHHhhccCCCc
Q 011567 379 ILRTGLSDIHGL 390 (483)
Q Consensus 379 ~l~~~L~~~~~~ 390 (483)
.+.+.|++.+++
T Consensus 303 ~la~~L~~~p~V 314 (427)
T PRK07049 303 AVAEFLRDHPKV 314 (427)
T ss_pred HHHHHHHhCCCc
Confidence 999999887654
No 294
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=1.4e-18 Score=174.57 Aligned_cols=212 Identities=17% Similarity=0.191 Sum_probs=163.2
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHh----HhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~----g~~~s~~~v~~~~~~d~~~Le 229 (483)
+....||++||++.+.+++++++||++|+..++.++.++||.|++..+.|+++.. .+...|.++..++..|.+.++
T Consensus 61 pt~~~Le~~iA~le~~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~ 140 (394)
T PRK09028 61 PTHFAFQAAIVELEGGAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIR 140 (394)
T ss_pred chHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHH
Confidence 4567999999999998899999999999999999999999998888777766553 233456777777767777777
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+.. ++++|++|.+.|++|.+.|+++|+++|++||+++++|++|+.+..- +. +. ..+|+
T Consensus 141 ~~l~~----------~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~---~P----l~---~GaDi 200 (394)
T PRK09028 141 ELIRP----------NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINS---RP----FE---MGVDI 200 (394)
T ss_pred HhcCc----------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccccC---Cc----cc---cCceE
Confidence 66532 3789999999999999999999999999999999999999865321 10 11 34599
Q ss_pred EEccccccccCC----CceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhc
Q 011567 310 VTAAMGHALATE----GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLS 385 (483)
Q Consensus 310 ~~~s~~K~lg~~----GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~ 385 (483)
++.|.+|++++. ||+++++++..+.++.. ....+..++|..|...+..|+-+ +-++++..+++..+.+.|+
T Consensus 201 vv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~--~~~~G~~~~p~~a~l~~rgl~TL---~lR~~~~~~na~~la~~L~ 275 (394)
T PRK09028 201 SIQAATKYIVGHSDVMLGTATANEKHWDQLREH--SYLMGQCTSPDDVYLAMRGLRTL---GVRLAQHEKNALKVANWLA 275 (394)
T ss_pred EEEeCCeEecCCCCEEEEEEECCHHHHHHHHHH--HHhcCCCCCHHHHHHHHcccCcH---HHHHHHHHHHHHHHHHHHh
Confidence 999999999754 57777777766555432 11234567888888777666655 3477888889999999998
Q ss_pred cCCCc
Q 011567 386 DIHGL 390 (483)
Q Consensus 386 ~~~~~ 390 (483)
+.+.+
T Consensus 276 ~~p~v 280 (394)
T PRK09028 276 TRPEV 280 (394)
T ss_pred cCCCc
Confidence 87644
No 295
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=9.5e-19 Score=178.69 Aligned_cols=214 Identities=16% Similarity=0.207 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHh----HhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~----g~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+||++||++.|.+.+++++||++|+..++.++.++||.|++....|.+... .+...|.+++.++.+|+++++
T Consensus 63 p~~~~le~~lA~l~g~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~ 142 (427)
T PRK05994 63 PTNAVLEERVAALEGGTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASFE 142 (427)
T ss_pred ccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHHH
Confidence 4568899999999999999999999999999999999999999988887775443 345568888888888888888
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+.. ++++|++|.+.+++|.+.|+++|+++|++||+++|+|++++.+.... .+. ..+|+
T Consensus 143 ~ai~~----------~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~~-------pl~---~gaDi 202 (427)
T PRK05994 143 RAITP----------RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLIR-------PIE---HGADI 202 (427)
T ss_pred HhcCc----------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccCC-------ccc---cCCcE
Confidence 77643 37899999999999999999999999999999999999997553221 111 34599
Q ss_pred EEccccccccCC----CceeeccHH-----------------------HHHHHH-------h-cCCceeecCCCcHHHHH
Q 011567 310 VTAAMGHALATE----GGFCTGSAR-----------------------VVDHQR-------L-SSSGYVFSASLPPYLAS 354 (483)
Q Consensus 310 ~~~s~~K~lg~~----GG~i~~~~~-----------------------~~~~~~-------~-~~~~~~fs~~~~p~~~a 354 (483)
++.|++|.+|+. ||+++.... +.+.+. . .......+..++|+.|+
T Consensus 203 vv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~ 282 (427)
T PRK05994 203 VVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAF 282 (427)
T ss_pred EEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHH
Confidence 999999999853 455553211 111100 0 00001234457898888
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCc
Q 011567 355 AAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 390 (483)
Q Consensus 355 aa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~ 390 (483)
.++..|+.+ +.+.++..+++..+.+.|++.|++
T Consensus 283 l~~~~l~tL---~~r~~~~~~~a~~la~~L~~~p~v 315 (427)
T PRK05994 283 LILTGIETL---PLRMQRHSDNALAVAEWLKGHPKV 315 (427)
T ss_pred HHHcCcccH---HHHHHHHHHHHHHHHHHHHhCCCc
Confidence 887777666 347788888999999999887654
No 296
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=1.4e-18 Score=176.89 Aligned_cols=214 Identities=17% Similarity=0.168 Sum_probs=154.8
Q ss_pred hHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhH----hhhcCCeEEEec-CCCHHH
Q 011567 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG----LYLSRSTVVYFK-HNDMDS 227 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g----~~~s~~~v~~~~-~~d~~~ 227 (483)
.+.+.+||++||++.|.+.+++++||++|+..++.++.++||.|+++...|.++... +...|.+++.++ ..|+++
T Consensus 68 ~p~~~~Le~~lA~l~g~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~ 147 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDA 147 (436)
T ss_pred CchHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHH
Confidence 356789999999999999999999999999999999999999998888777765543 233456666664 335555
Q ss_pred HHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCce
Q 011567 228 LRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKI 307 (483)
Q Consensus 228 Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~ 307 (483)
+++.++ + ++++|++|.+++++|.+.|+++|.++|++||+++|+|++++.+.+. +. + ...+
T Consensus 148 l~~ai~---~-------~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~---~p------l-~~Ga 207 (436)
T PRK07812 148 WRAAVR---P-------NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLI---RP------L-EHGA 207 (436)
T ss_pred HHHhCC---C-------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC---Cc------h-hcCC
Confidence 554442 2 3789999999999999999999999999999999999998765432 11 1 1245
Q ss_pred eEEEccccccccCCC----ceeeccHHH------------------------------HHHHHhcCCceeecCCCcHHHH
Q 011567 308 DIVTAAMGHALATEG----GFCTGSARV------------------------------VDHQRLSSSGYVFSASLPPYLA 353 (483)
Q Consensus 308 Di~~~s~~K~lg~~G----G~i~~~~~~------------------------------~~~~~~~~~~~~fs~~~~p~~~ 353 (483)
|+++.|++|.+|+.| |.++.+... +...+... ....++.++|..|
T Consensus 208 Divv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~l~p~~a 286 (436)
T PRK07812 208 DIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQL-LRDLGSAISPFNA 286 (436)
T ss_pred CEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHH-HHhcCCCCCHHHH
Confidence 999999999998665 444432210 00111000 0022346778877
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCc
Q 011567 354 SAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 390 (483)
Q Consensus 354 aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~ 390 (483)
...+..++.+ +.+.++..+++..+.+.|++.|++
T Consensus 287 ~l~~rgl~tL---~~R~~~~~~nA~~la~~L~~~p~v 320 (436)
T PRK07812 287 FLIAQGLETL---SLRIERHVANAQRVAEFLEARDEV 320 (436)
T ss_pred HHHhcCcCcH---HHHHHHHHHHHHHHHHHHHhCCCc
Confidence 7666665544 457888889999999999887654
No 297
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=2e-18 Score=173.59 Aligned_cols=212 Identities=14% Similarity=0.114 Sum_probs=162.6
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHh----hhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL----YLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~----~~s~~~v~~~~~~d~~~Le 229 (483)
+....|+++||++.|.+.++++++|++|+..++.++.++||.|++..+.|++....+ ...+.++..++..|+++++
T Consensus 53 pt~~~Le~~lA~leg~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~ 132 (388)
T PRK08861 53 PNRGLLEQTLSELESGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAALD 132 (388)
T ss_pred chHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHHHH
Confidence 457899999999999999999999999999999999999999999888887654322 2335677777777888887
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+.. ++++|+++.+.+++|.+.|+++|.++|+++|+++|+||+|..+.+. +. .. ..+|+
T Consensus 133 ~~i~~----------~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~---~p----l~---~GaDi 192 (388)
T PRK08861 133 AALAK----------KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQ---KP----LE---LGADF 192 (388)
T ss_pred HhcCc----------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccC---CC----cc---cCCCE
Confidence 76643 3689999999999999999999999999999999999999866432 11 11 23599
Q ss_pred EEccccccccCC----Cceeec-cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 310 VTAAMGHALATE----GGFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 310 ~~~s~~K~lg~~----GG~i~~-~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
+++|++|.+++. ||++++ ++++.+.++... ...+..++|+.+...+..|+-+ .-++++..+++..+.+.|
T Consensus 193 vv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~--~~~G~~~~p~~a~l~~rgl~Tl---~lR~~~~~~~a~~~a~~L 267 (388)
T PRK08861 193 VIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWG--NCIGATGTPFDSYMTLRGIRTL---GARMRVHEESAQQILAYL 267 (388)
T ss_pred EEeecceeccCCCcceeEEEEecHHHHHHHHHHHH--hccCCCCChHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHHH
Confidence 999999999742 688766 455655554221 2335567888877666666544 346788888888899999
Q ss_pred ccCCCc
Q 011567 385 SDIHGL 390 (483)
Q Consensus 385 ~~~~~~ 390 (483)
++.|.+
T Consensus 268 ~~~p~v 273 (388)
T PRK08861 268 QTQSLV 273 (388)
T ss_pred HhCCCe
Confidence 877643
No 298
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.83 E-value=8.8e-18 Score=174.12 Aligned_cols=350 Identities=14% Similarity=0.132 Sum_probs=212.4
Q ss_pred EEeecCCCCCCCCC--hHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC---------------CCEEE
Q 011567 112 VNFASANYLGLIGH--EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT---------------PDSIL 174 (483)
Q Consensus 112 id~~s~~~lG~~~~--p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~---------------e~~i~ 174 (483)
++..+..|+||... |.+.-++.+.+..++.+............+..++-++++++++. ...++
T Consensus 85 ~~~~hP~f~g~~~~~~p~~~~~l~~l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~ 164 (522)
T TIGR03799 85 VHTASPSFIGHMTSALPYFMLPLSKLMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAF 164 (522)
T ss_pred CCCCCCCeEEeccCCCchHHHHHHHHHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEE
Confidence 44445577777654 55433333322222222111111112234555566666666531 12577
Q ss_pred ecccHHHHHhhhhhhcc--------------------------CCcEEEEcCCchhHHHhHhhhcCC---eEEEecCC--
Q 011567 175 YSYGLSTMFSAIPCFCK--------------------------KGDLIVADEGVHWGIQNGLYLSRS---TVVYFKHN-- 223 (483)
Q Consensus 175 ~~sG~~a~~~ai~~~~~--------------------------~gdiI~~~~~~h~s~~~g~~~s~~---~v~~~~~~-- 223 (483)
.++|++||..|+.+... ++..|++.+..|.|+.+++...|. +++.++.+
T Consensus 165 tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~ 244 (522)
T TIGR03799 165 CSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDAN 244 (522)
T ss_pred cCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCC
Confidence 79999999887533110 245799999999999999887776 56665543
Q ss_pred ---CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCcccccccc-CCCCccccc
Q 011567 224 ---DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLG-RSGRGLTEH 299 (483)
Q Consensus 224 ---d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg-~~G~g~~~~ 299 (483)
|+++|++.+++.... .....+|+.....+.+|.+.|+++|.++|++||+++++|.+++++.+- ...+.. .
T Consensus 245 g~~d~~~L~~~i~~~~~~----g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~--l 318 (522)
T TIGR03799 245 NRIDVDALRDKCAELAEQ----NIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHL--L 318 (522)
T ss_pred CcCCHHHHHHHHHHHHHC----CCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHH--h
Confidence 789999988764332 111233333344557899999999999999999999999999865431 111111 1
Q ss_pred cCCCCCceeEEEcccccccc-CCC-cee-eccHHHHHHHHhc--------C---CceeecCCCcHHHHHHHHHHHHHHhc
Q 011567 300 CGVPVDKIDIVTAAMGHALA-TEG-GFC-TGSARVVDHQRLS--------S---SGYVFSASLPPYLASAAITAIDVLEE 365 (483)
Q Consensus 300 ~~v~~~~~Di~~~s~~K~lg-~~G-G~i-~~~~~~~~~~~~~--------~---~~~~fs~~~~p~~~aaa~~al~~l~~ 365 (483)
-++ ..+|.++.+.+|+++ +.| |++ +.++...+.+... + ..+.+.++-+..+ .....+++.+..
T Consensus 319 ~gl--e~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~ 395 (522)
T TIGR03799 319 KGI--ERADSVTIDAHKQLYVPMGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGR 395 (522)
T ss_pred cCc--hhCCEEEEChhhcCCcCcccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHH-HHHHHHHHHHhH
Confidence 222 356999999999774 444 554 4455555544321 0 1134444434332 345567777643
Q ss_pred --CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCC--------------chhhHHHHHHHHHHHHHh
Q 011567 366 --NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGS--------------MKNDLQLLEDIADWALKE 429 (483)
Q Consensus 366 --~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~--------------~~~~~~~~~~i~~~~l~~ 429 (483)
..+++++..+++++|.+.|++.+++++..++..+++++++.+.... ........+.+.+++.++
T Consensus 396 ~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~ 475 (522)
T TIGR03799 396 KGYELLIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREA 475 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhc
Confidence 3578889999999999999998999999888888999987543210 011234456777766666
Q ss_pred CCEEEEeecccc-cccCCCCCceEEEc-cCCCCHHHHHHHHHH
Q 011567 430 DGVFVVTSKRSM-LDKCRLPVGIRLFV-SAAHSEADLVKACES 470 (483)
Q Consensus 430 ~Gv~v~~~~~~~-~~~~~~~~~lRi~~-~~~~t~edi~~~~~~ 470 (483)
+.+++++..... .-+......+|+++ +...|++||+.+++-
T Consensus 476 G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 476 GKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred CCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 566676543211 00010012389977 667789998886653
No 299
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=1.2e-17 Score=163.65 Aligned_cols=294 Identities=20% Similarity=0.248 Sum_probs=213.4
Q ss_pred HHHHHHHHHHHhhhCCC--CEEEe-cccHHHHHhhhhhhccCCcEEE-EcCCchhH-HHhHhhhcCCeEEEecCC-----
Q 011567 154 DVHLDCEARIAKFLGTP--DSILY-SYGLSTMFSAIPCFCKKGDLIV-ADEGVHWG-IQNGLYLSRSTVVYFKHN----- 223 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e--~~i~~-~sG~~a~~~ai~~~~~~gdiI~-~~~~~h~s-~~~g~~~s~~~v~~~~~~----- 223 (483)
+...++.+.|...++++ ++++. +||+.++++++..+.+|||.|+ +..+.++. ..+-++..|.++..+...
T Consensus 38 ~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v 117 (383)
T COG0075 38 GIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGERFAEIAERYGAEVVVLEVEWGEAV 117 (383)
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHHHHHHHHHhCCceEEEeCCCCCCC
Confidence 46788889999999977 55555 8999999999999999998655 45555544 345566777777665433
Q ss_pred CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCC
Q 011567 224 DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVP 303 (483)
Q Consensus 224 d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~ 303 (483)
|++++++.|++..+ .++|.+.+.-+.||.+.|+++|.++|++||.++|+|.+-|+|... +.++
T Consensus 118 ~p~~v~~~L~~~~~--------~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~---------~~vd 180 (383)
T COG0075 118 DPEEVEEALDKDPD--------IKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEP---------LKVD 180 (383)
T ss_pred CHHHHHHHHhcCCC--------ccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCcc---------cchh
Confidence 89999999985432 556666666677899999999999999999999999999876322 3444
Q ss_pred CCceeEEEcccccccc-CCC-ceeeccHHHHHHHHhcCCc-e---------------eecCCCcHHHHHHHHHHHHHHhc
Q 011567 304 VDKIDIVTAAMGHALA-TEG-GFCTGSARVVDHQRLSSSG-Y---------------VFSASLPPYLASAAITAIDVLEE 365 (483)
Q Consensus 304 ~~~~Di~~~s~~K~lg-~~G-G~i~~~~~~~~~~~~~~~~-~---------------~fs~~~~p~~~aaa~~al~~l~~ 365 (483)
.-.+|+++++--|+|+ ++| |++..+++..+.+.....+ | .|..+.|.....+..++|+.+.+
T Consensus 181 ~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~ 260 (383)
T COG0075 181 EWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILE 260 (383)
T ss_pred hcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 4467999999999997 455 7787777776665433222 1 12223455566677789998876
Q ss_pred C--cHHHHHHHHHHHHHHHhhccCCCceeecC--CCCCEE-EEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccc
Q 011567 366 N--PDLITKLKKNTAILRTGLSDIHGLSIASN--PESPIV-FLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRS 440 (483)
Q Consensus 366 ~--~~~~~~l~~~~~~l~~~L~~~~~~~i~~~--~~~~i~-~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~ 440 (483)
+ +..+++.+++.+.+++++.++ |+++..+ ..+|.+ .+.++... . +. ++...+++++|+.+..+..+
T Consensus 261 EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g~--~--~~----~~~~~~~~~~g~~i~gg~~~ 331 (383)
T COG0075 261 EGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEGV--D--DK----KVRRALLKEYGVEIAGGQGP 331 (383)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCCC--C--cH----HHHHHHHHhCCEEecccccc
Confidence 5 678999999999999999987 9887762 235444 44443211 1 11 22335677789999876544
Q ss_pred ccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 441 MLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 441 ~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
..+ .-+||......+.+|+..++.+|..+++++
T Consensus 332 l~g-----kifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 332 LKG-----KIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred cCc-----cEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence 321 239998777899999999999999999875
No 300
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.83 E-value=1.9e-18 Score=174.05 Aligned_cols=212 Identities=13% Similarity=0.125 Sum_probs=159.8
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHh----hhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL----YLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~----~~s~~~v~~~~~~d~~~Le 229 (483)
+...+|++.||++.|.+.++++++|++|+..++.++.++||.|++..+.|++...-+ ...+.++..++..|+++++
T Consensus 51 p~~~~le~~lA~l~g~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~ 130 (382)
T TIGR02080 51 PTRDLLQQALAELEGGAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALR 130 (382)
T ss_pred chHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHH
Confidence 467899999999999889999999999999999999999999999888887644322 2234566666556777777
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+++ ++++|+++.+.+++|.+.|+++|.++|+++|+++++||+|..+... .. .. ..+|+
T Consensus 131 ~ai~~----------~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~---~p----l~---~gaDi 190 (382)
T TIGR02080 131 AALAQ----------KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQ---NP----LA---LGADL 190 (382)
T ss_pred HhcCc----------CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccC---Cc----hh---hCCCE
Confidence 76643 2688999999999999999999999999999999999999765322 11 11 13489
Q ss_pred EEccccccccC----CCceeec-cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 310 VTAAMGHALAT----EGGFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 310 ~~~s~~K~lg~----~GG~i~~-~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
+++|++|.+++ .+|+++. ++++.+.++... ...+..++|+.+..++..++.+. ..+++..+++..+.+.|
T Consensus 191 vv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~--~~~g~~~sp~~a~l~lr~l~tl~---~R~~~~~~na~~~a~~L 265 (382)
T TIGR02080 191 VLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWA--NNLGVTGGAFDSYLTLRGLRTLV---ARMRLQQRNAQAIVEYL 265 (382)
T ss_pred EEeecceeccCCCCceeEEEEeCCHHHHHHHHHHH--HccCCCCCHHHHHHHHcccchHH---HHHHHHHHHHHHHHHHH
Confidence 99999999963 3577654 667766654332 12244578888887777666553 35777788888888988
Q ss_pred ccCCCc
Q 011567 385 SDIHGL 390 (483)
Q Consensus 385 ~~~~~~ 390 (483)
++.+.+
T Consensus 266 ~~~p~v 271 (382)
T TIGR02080 266 QTQPLV 271 (382)
T ss_pred HhCCCe
Confidence 876644
No 301
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.83 E-value=2.3e-18 Score=178.15 Aligned_cols=292 Identities=18% Similarity=0.214 Sum_probs=183.8
Q ss_pred cccChHHHHHHHHHHHhhhCCC--CEEEecccHHHHHhhhhhhc-cCCcEEEEcCCchhHHHhHhhh----cCCeEEEec
Q 011567 149 FYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAIPCFC-KKGDLIVADEGVHWGIQNGLYL----SRSTVVYFK 221 (483)
Q Consensus 149 ~~g~~~~~~~l~~~La~~~g~e--~~i~~~sG~~a~~~ai~~~~-~~gdiI~~~~~~h~s~~~g~~~----s~~~v~~~~ 221 (483)
..|..+...++.+.+++++|.+ +.+++++|++++.+++.++. +++|.|++.+..|.++...+.. .|.+++.++
T Consensus 107 ~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~ 186 (447)
T PRK00451 107 SQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVP 186 (447)
T ss_pred chHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEec
Confidence 4444556677778899999975 34566777888877777764 6889999999999888776654 578888887
Q ss_pred CC----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEE--eCccccccccCCCCc
Q 011567 222 HN----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFL--DESNSFGVLGRSGRG 295 (483)
Q Consensus 222 ~~----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~--DEa~s~g~lg~~G~g 295 (483)
.+ |+++|++.+.+ ++++|++... +++|.+.|+++|.++|+++|+++++ |.+ +.|.+..
T Consensus 187 ~~~~~~d~~~l~~~i~~----------~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~~---- 250 (447)
T PRK00451 187 YEDGVTDLEALEAAVDD----------DTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLKP---- 250 (447)
T ss_pred CCCCCCCHHHHHHhcCC----------CeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCCC----
Confidence 65 56666665532 2667777766 7789999999999999999999998 533 3333221
Q ss_pred cccccCCCCCceeEEEcc---ccccc--c-CCCceeeccHHHHHHHHhc----------CCcee----------------
Q 011567 296 LTEHCGVPVDKIDIVTAA---MGHAL--A-TEGGFCTGSARVVDHQRLS----------SSGYV---------------- 343 (483)
Q Consensus 296 ~~~~~~v~~~~~Di~~~s---~~K~l--g-~~GG~i~~~~~~~~~~~~~----------~~~~~---------------- 343 (483)
.+ ..++|++++| ++|.+ + +..||++.++++++.+... ..+|.
T Consensus 251 ----~~--~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (447)
T PRK00451 251 ----PG--EYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKAT 324 (447)
T ss_pred ----cc--cCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeecccccccccccccc
Confidence 11 1345888874 44443 3 3348888888887764110 00010
Q ss_pred ecC-CCcHHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHH
Q 011567 344 FSA-SLPPYLASAAITAIDVLEE--NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLE 420 (483)
Q Consensus 344 fs~-~~~p~~~aaa~~al~~l~~--~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~ 420 (483)
... +..++.+.++..+++.+.+ .++..+++.++++++.+.|++++++++........+.+.+.. ...
T Consensus 325 ~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~v~~~~----------~~~ 394 (447)
T PRK00451 325 SNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPFFNEFVVRLPK----------PAE 394 (447)
T ss_pred ccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCeEEEEEEecCC----------CHH
Confidence 010 1112222233334443322 246788899999999999998877877521111112233310 123
Q ss_pred HHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 421 DIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 421 ~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
++++++++ +|+.+.....+..+ ...+.+|++++..+|++|+++++++|++++
T Consensus 395 ~~~~~L~~-~gi~~~~~~~~~~~--~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 395 EVNEALLE-KGILGGYDLGRYYP--ELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred HHHHHHHh-cCCCCCcccccccC--CcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 67777655 46654221111100 012459999999999999999999998764
No 302
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.83 E-value=1.2e-17 Score=170.83 Aligned_cols=292 Identities=18% Similarity=0.221 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhh---------ccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC-
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN- 223 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~---------~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~- 223 (483)
+...+||+++|+++|.+.+++++||++|+..++.++ .++||.|+++...|.++..++...|.+++.++.+
T Consensus 63 ~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~ 142 (438)
T PRK15407 63 RFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL 142 (438)
T ss_pred hhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC
Confidence 457899999999999999999999999999998875 3789999999999999999998889888776542
Q ss_pred -----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCcccc
Q 011567 224 -----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTE 298 (483)
Q Consensus 224 -----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~ 298 (483)
|++++++.+.. ++++|++.+++ |...++++|.++|++||+++|+|++|++|..-. |+.. .
T Consensus 143 ~~~~id~~~le~~i~~----------~tkaVi~~~~~---G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~-g~~~-G 207 (438)
T PRK15407 143 PTYNIDASLLEAAVSP----------KTKAIMIAHTL---GNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYD-GRMT-G 207 (438)
T ss_pred CcCCcCHHHHHHHcCc----------CCeEEEEeCCC---CChhhHHHHHHHHHHCCCEEEEECccchhhhcC-Ceee-e
Confidence 56667665532 26777777653 677889999999999999999999999876422 2211 1
Q ss_pred ccCCCCCceeEEEccc--ccccc-CCCceeeccH-HHHHH---HHhcCCc------------------------------
Q 011567 299 HCGVPVDKIDIVTAAM--GHALA-TEGGFCTGSA-RVVDH---QRLSSSG------------------------------ 341 (483)
Q Consensus 299 ~~~v~~~~~Di~~~s~--~K~lg-~~GG~i~~~~-~~~~~---~~~~~~~------------------------------ 341 (483)
.+| |+.++|| +|.+. +.||+++.++ ++.+. ++..+..
T Consensus 208 ~~g------d~~~fSf~~~k~~~~geGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (438)
T PRK15407 208 TFG------DIATLSFYPAHHITMGEGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKY 281 (438)
T ss_pred ccC------ceEEEeCCCCCCccccCceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccc
Confidence 122 6666677 46564 4578876654 44333 2222110
Q ss_pred ----eeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCC-ceeec--CCCCC---EEEEEecCCCCC
Q 011567 342 ----YVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHG-LSIAS--NPESP---IVFLILEKSTGS 411 (483)
Q Consensus 342 ----~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~-~~i~~--~~~~~---i~~l~l~~~~~~ 411 (483)
..|...++.+.+|.++..|+.++ +..++-+++.+++.+.|.++++ +.+.. ....+ .+.+.+.+..+
T Consensus 282 ~~~~~G~n~rmsel~AAig~~qL~~l~---~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 357 (438)
T PRK15407 282 TYSHLGYNLKITDMQAAIGLAQLEKLP---GFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAG- 357 (438)
T ss_pred cccccccccCccHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCC-
Confidence 01223478899999988888775 4677788888999999987754 22211 11112 33444532111
Q ss_pred chhhHHHHHHHHHHHHHhCCEEEEeeccccc------cc------CCCCC-------ceEEEccCCCCHHHHHHHHHHHH
Q 011567 412 MKNDLQLLEDIADWALKEDGVFVVTSKRSML------DK------CRLPV-------GIRLFVSAAHSEADLVKACESLK 472 (483)
Q Consensus 412 ~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~------~~------~~~~~-------~lRi~~~~~~t~edi~~~~~~l~ 472 (483)
. .-.++.+. |+++||.......+.+ .. ...|. .|-+.++..+|++|+++++++|+
T Consensus 358 ~-----~Rd~l~~~-L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~ 431 (438)
T PRK15407 358 F-----TRVELVKY-LEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIE 431 (438)
T ss_pred C-----CHHHHHHH-HHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHH
Confidence 0 12255664 5567987653321111 00 11121 27777788889999999999999
Q ss_pred HHHH
Q 011567 473 RISA 476 (483)
Q Consensus 473 ~~~~ 476 (483)
++++
T Consensus 432 ~~~~ 435 (438)
T PRK15407 432 EFFG 435 (438)
T ss_pred HHHh
Confidence 9875
No 303
>PRK05939 hypothetical protein; Provisional
Probab=99.83 E-value=9.6e-19 Score=176.82 Aligned_cols=213 Identities=16% Similarity=0.159 Sum_probs=158.0
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhH---HHhHhhhcCCeEEEecCCCHHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWG---IQNGLYLSRSTVVYFKHNDMDSLRN 230 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s---~~~g~~~s~~~v~~~~~~d~~~Le~ 230 (483)
+...+||++|+++.|.+.++++++|.+|+..++.++.++||.|++....|++ ....+...|.++..++..|++++++
T Consensus 47 p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~d~e~l~~ 126 (397)
T PRK05939 47 PTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDATDVQNVAA 126 (397)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCCCHHHHHH
Confidence 6678999999999999999999999999999999999999999998887654 3345666788999998888888888
Q ss_pred HHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEE
Q 011567 231 TLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIV 310 (483)
Q Consensus 231 ~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~ 310 (483)
.+.. ++++|+++.+.+++|.+.|+++|+++|++||+++|+|++++.+.. ++....++|++
T Consensus 127 ~l~~----------~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~----------~~~~~~gaDiv 186 (397)
T PRK05939 127 AIRP----------NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWL----------FRPKDVGASLV 186 (397)
T ss_pred hCCC----------CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccc----------cCccccCCEEE
Confidence 7743 378999999999999999999999999999999999999864321 11111245999
Q ss_pred EccccccccCCC----ceeeccHH--------HHH-------------HHHhcCCceeecCCCcHHHHHHHHHHHHHHhc
Q 011567 311 TAAMGHALATEG----GFCTGSAR--------VVD-------------HQRLSSSGYVFSASLPPYLASAAITAIDVLEE 365 (483)
Q Consensus 311 ~~s~~K~lg~~G----G~i~~~~~--------~~~-------------~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~ 365 (483)
+.|++|.+++.| |.++.+.. +.+ .++... .-.+++.++|..+-.....++.+
T Consensus 187 v~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~~p~~a~l~~rgl~tl-- 263 (397)
T PRK05939 187 INSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKG-LRDMGATLSSEAAHRIAIGAETL-- 263 (397)
T ss_pred EecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHH-HHhcCCCCCHHHHHHHHcCcCcH--
Confidence 999999998654 33332221 111 111100 01234556777776665555544
Q ss_pred CcHHHHHHHHHHHHHHHhhccCCCc
Q 011567 366 NPDLITKLKKNTAILRTGLSDIHGL 390 (483)
Q Consensus 366 ~~~~~~~l~~~~~~l~~~L~~~~~~ 390 (483)
..+.++..+++..+.+.|++.|.+
T Consensus 264 -~~R~~~~~~na~~la~~L~~~p~V 287 (397)
T PRK05939 264 -ALRVDRSCSNALALAQFLEAHPKV 287 (397)
T ss_pred -HHHHHHHHHHHHHHHHHHHhCCCc
Confidence 346777778888899999876643
No 304
>PRK08637 hypothetical protein; Provisional
Probab=99.82 E-value=1.6e-17 Score=168.59 Aligned_cols=279 Identities=15% Similarity=0.119 Sum_probs=176.6
Q ss_pred EEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhh-hcCCeEEEecC--C----CHHHHHHHHHHhhhhhhhccCc
Q 011567 173 ILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY-LSRSTVVYFKH--N----DMDSLRNTLERVTADNKRAKKL 245 (483)
Q Consensus 173 i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~-~s~~~v~~~~~--~----d~~~Le~~l~~~~~~~~~~~~~ 245 (483)
++.+++.+++..++.+++++||.|+++.++|..+...+. ..|.+++.++. + |++++++.++.... ..
T Consensus 73 ~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~------~~ 146 (388)
T PRK08637 73 IVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYN------KG 146 (388)
T ss_pred eEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhcc------CC
Confidence 444555688888999999999999999999888877654 57888887764 2 56777776652111 13
Q ss_pred cEEEEEecccCCCCCccC---hHHHHHHHHH-----cCcEEEEeCccccccccCCCC-ccccc-cCCCCCce-eEEEccc
Q 011567 246 RRYIVVEAVYQNSGQIAP---LDELIRLKEK-----YRFRVFLDESNSFGVLGRSGR-GLTEH-CGVPVDKI-DIVTAAM 314 (483)
Q Consensus 246 ~~~iv~e~v~~~~G~i~~---L~~l~~l~~k-----~~~~li~DEa~s~g~lg~~G~-g~~~~-~~v~~~~~-Di~~~s~ 314 (483)
++++++...+|++|...+ +++|+++|++ |++++|+||+|....+..... .+... .+.. +.+ -+.++|+
T Consensus 147 ~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~-~~vi~i~~~s~ 225 (388)
T PRK08637 147 KVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLH-SNILAVKLDGA 225 (388)
T ss_pred CEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhccc-ccceEEEeccc
Confidence 567777778999999888 6777777765 999999999998655432110 11111 1221 122 2345699
Q ss_pred cccccCCC---ceeec------cHHHHHHHHhcCC---ceeecCCCcHHHHHHHHHHHHH---HhcCcHHHHHHHHHHHH
Q 011567 315 GHALATEG---GFCTG------SARVVDHQRLSSS---GYVFSASLPPYLASAAITAIDV---LEENPDLITKLKKNTAI 379 (483)
Q Consensus 315 ~K~lg~~G---G~i~~------~~~~~~~~~~~~~---~~~fs~~~~p~~~aaa~~al~~---l~~~~~~~~~l~~~~~~ 379 (483)
||.++.+| ||++. ++++++.+..... ...+. +.|.+..+++.+.++. .....+.+..++++.+.
T Consensus 226 SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~ 304 (388)
T PRK08637 226 TKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNIS-NGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEK 304 (388)
T ss_pred cccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccC-CCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 99987666 99863 3677766543110 01111 2345555555555531 11112234456666666
Q ss_pred HHHhhccC---CCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEcc
Q 011567 380 LRTGLSDI---HGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVS 456 (483)
Q Consensus 380 l~~~L~~~---~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~ 456 (483)
+.+.|++. .++.+..+..+.++++.++. ....++++.+++++||.+.... ...+||+++
T Consensus 305 ~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~---------~~~~~l~~~l~~~~gv~~~~~~---------~~~iRi~~~ 366 (388)
T PRK08637 305 TKEVLYDGKYDDAWQAYPFNSGYFMCLKLKG---------VDAEELRVHLLEKYGIGTIALN---------ETDLRIAFS 366 (388)
T ss_pred HHHHHHhhCCCCCcccccccceEEEEecCCh---------HHHHHHHHHHhhhcceEEEecc---------CCceEEEee
Confidence 66666543 14555544456677777631 1234677777766799876321 134999997
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q 011567 457 AAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 457 ~~~t~edi~~~~~~l~~~~~~~ 478 (483)
. .++++++++++.|+++++.+
T Consensus 367 ~-~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 367 C-VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred c-CCHHHHHHHHHHHHHHHHhc
Confidence 6 78999999999999988753
No 305
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=6e-18 Score=170.53 Aligned_cols=212 Identities=15% Similarity=0.147 Sum_probs=159.3
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHh----hhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL----YLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~----~~s~~~v~~~~~~d~~~Le 229 (483)
+...+|+++||++.|.++++++++|++|+..++.++.++||.|++..+.|++....+ ...+.++..++..|+++++
T Consensus 52 pt~~~L~~~lA~l~g~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~ 131 (386)
T PRK08045 52 PTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALR 131 (386)
T ss_pred ccHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHHHH
Confidence 457899999999999888999999999999999999999999999888887544322 1233466666656777777
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+++ ++++|+++.+.|++|.+.|+++|.++|+++|+++|+||+|..+... +. .. ..+|+
T Consensus 132 ~~l~~----------~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~---~p----l~---~gaDi 191 (386)
T PRK08045 132 AALAE----------KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQ---NP----LA---LGADL 191 (386)
T ss_pred Hhccc----------CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC---Cc----hh---hCCCE
Confidence 76643 2678999999999999999999999999999999999999765331 11 11 23489
Q ss_pred EEccccccccC----CCceeec-cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 310 VTAAMGHALAT----EGGFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 310 ~~~s~~K~lg~----~GG~i~~-~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
++.|++|.+++ .||++++ ++++.+.++.... ..+..++|+.+..+..+|+.+ +..+++..+++..+.+.|
T Consensus 192 vv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~--~~g~~~~p~~~~l~~rgl~tl---~~R~~~~~~na~~la~~L 266 (386)
T PRK08045 192 VLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWAN--NIGVTGGAFDSYLLLRGLRTL---VPRMELAQRNAQAIVKYL 266 (386)
T ss_pred EEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHH--hcCCCCCHHHHHHHHhhhccH---HHHHHHHHHHHHHHHHHH
Confidence 99999999963 2466544 5777666543221 224456788887777777655 347788888999999999
Q ss_pred ccCCCc
Q 011567 385 SDIHGL 390 (483)
Q Consensus 385 ~~~~~~ 390 (483)
++.+.+
T Consensus 267 ~~~p~v 272 (386)
T PRK08045 267 QTQPLV 272 (386)
T ss_pred HcCCCE
Confidence 877644
No 306
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.82 E-value=1.1e-17 Score=183.51 Aligned_cols=348 Identities=13% Similarity=0.090 Sum_probs=222.3
Q ss_pred eeEEEeecCCCCCCCCChHHH-HHHHHHHHhcCCCCCC-CCCcccChHHHHHHHHHHHhhhCCC--C-EEEe-cccHHHH
Q 011567 109 KEVVNFASANYLGLIGHEKLL-ESCTSALEKYGVGSCG-PRGFYGTIDVHLDCEARIAKFLGTP--D-SILY-SYGLSTM 182 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~-~a~~~~l~~~g~g~~~-~~~~~g~~~~~~~l~~~La~~~g~e--~-~i~~-~sG~~a~ 182 (483)
.-|+|.++... ..|... +++.+.+..+..+..+ .....-..+...+.++.+++++|.+ + .|+| +++++++
T Consensus 35 ~iYLD~Aatt~----~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~al 110 (805)
T PLN02724 35 VVYLDHAGATL----YSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAAL 110 (805)
T ss_pred CEeEeCCCCCC----CCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHH
Confidence 46888887532 234444 4444454543222221 1111113457789999999999963 3 3455 5677888
Q ss_pred Hhhhhhh-ccCCcEEEEcCCchhHHHhHhh---hcCCeEEEecCC-----------CH----HHHHHHHHH-hhhhhhhc
Q 011567 183 FSAIPCF-CKKGDLIVADEGVHWGIQNGLY---LSRSTVVYFKHN-----------DM----DSLRNTLER-VTADNKRA 242 (483)
Q Consensus 183 ~~ai~~~-~~~gdiI~~~~~~h~s~~~g~~---~s~~~v~~~~~~-----------d~----~~Le~~l~~-~~~~~~~~ 242 (483)
..++..+ .++||.|++....|.++..... ..|.++.+++.+ ++ ++|++.++. .... ...
T Consensus 111 nlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~-~~~ 189 (805)
T PLN02724 111 KLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKR-EDD 189 (805)
T ss_pred HHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccc-ccc
Confidence 8887776 4678988888888887664433 246777766543 11 234433210 0000 000
Q ss_pred cCccEEEEEecccCCCCCccChHHHHHHHHHc--------CcEEEEeCccccccccCCCCccccccCCCCCceeEEEccc
Q 011567 243 KKLRRYIVVEAVYQNSGQIAPLDELIRLKEKY--------RFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAM 314 (483)
Q Consensus 243 ~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~--------~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~ 314 (483)
..++++|++.++.+.+|.+.|++.+.++++.. ++++++|.+|+.|... .++...++|++++|.
T Consensus 190 ~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~p---------iDv~~~~~Dfl~~S~ 260 (805)
T PLN02724 190 GEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSP---------PDLSRYPADFVVVSF 260 (805)
T ss_pred CCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCC---------CChhhcCCCEEEEec
Confidence 12457999999999999999999775555532 3689999999977542 344434569999999
Q ss_pred ccccc-CCC-ceeeccHHHHHHHHhc--CC-------------------ceeec-CCCcHHHHHHHHHHHHHHhc--CcH
Q 011567 315 GHALA-TEG-GFCTGSARVVDHQRLS--SS-------------------GYVFS-ASLPPYLASAAITAIDVLEE--NPD 368 (483)
Q Consensus 315 ~K~lg-~~G-G~i~~~~~~~~~~~~~--~~-------------------~~~fs-~~~~p~~~aaa~~al~~l~~--~~~ 368 (483)
+|.+| +.| |+++.+++..+.+... +. ...|. ++.|...+++..++++++.+ .+.
T Consensus 261 HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~ 340 (805)
T PLN02724 261 YKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISA 340 (805)
T ss_pred ceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHH
Confidence 99998 555 8887777776654421 11 01122 23555666677788888875 256
Q ss_pred HHHHHHHHHHHHHHhhccCC------CceeecC--------CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEE
Q 011567 369 LITKLKKNTAILRTGLSDIH------GLSIASN--------PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFV 434 (483)
Q Consensus 369 ~~~~l~~~~~~l~~~L~~~~------~~~i~~~--------~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v 434 (483)
+.++.+++.+++.+.|++++ ++.++++ .++|++.|.+....+..-.. ..+..++.++||.+
T Consensus 341 I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~-----~~v~~l~~~~gI~v 415 (805)
T PLN02724 341 IAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGH-----REVEKLASLSGIQL 415 (805)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCH-----HHHHHHHHhcCcEE
Confidence 78889999999999998875 4666643 25689998886543221111 11334556679999
Q ss_pred Eeecccccc---c---------------------------CCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 435 VTSKRSMLD---K---------------------------CRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 435 ~~~~~~~~~---~---------------------------~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
+.+..+... . ..+.+.+|+|+...+|.+|||+++++|++..
T Consensus 416 R~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 416 RTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred eeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 877553311 0 0112459999999999999999999999865
No 307
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.82 E-value=2.9e-18 Score=175.09 Aligned_cols=149 Identities=16% Similarity=0.193 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHH----hHhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~----~g~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+|+++||++.|.+.++++++|++|+..++.++.++||.|++....|++.. ..+...|.++..++.+|+++++
T Consensus 57 p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~l~ 136 (418)
T TIGR01326 57 PTTDVLEQRIAALEGGVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEEFE 136 (418)
T ss_pred hhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHHHH
Confidence 456899999999999999999999999999999999999998888877665443 3345678889889888888888
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+.+ ++++|++|.+.+++|.+.|+++|+++|++||+++|+||+++.+.... ... ..+|+
T Consensus 137 ~~l~~----------~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~~-------~l~---~g~Di 196 (418)
T TIGR01326 137 KAIDE----------NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLCR-------PID---HGADI 196 (418)
T ss_pred HhcCc----------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcCC-------chh---cCCeE
Confidence 77743 26788899999999999999999999999999999999997553211 111 23599
Q ss_pred EEccccccccCCC
Q 011567 310 VTAAMGHALATEG 322 (483)
Q Consensus 310 ~~~s~~K~lg~~G 322 (483)
++.|++|++++.|
T Consensus 197 vv~S~sK~l~g~G 209 (418)
T TIGR01326 197 VVHSATKYIGGHG 209 (418)
T ss_pred EEECccccccCCc
Confidence 9999999998644
No 308
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.82 E-value=5e-18 Score=175.26 Aligned_cols=341 Identities=14% Similarity=0.111 Sum_probs=200.6
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHh-hh-C---C--C-CEEEecccHH
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAK-FL-G---T--P-DSILYSYGLS 180 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~-~~-g---~--e-~~i~~~sG~~ 180 (483)
+.++|++-+.+ ++..++.+.+ +.+.+. |.+.+.| .|..+..+++.+...+ .+ + . + +.++.+++++
T Consensus 100 ~~~i~l~~g~p-~~~~~~~v~e-~~~~~~--~~~Y~~~---~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~ 172 (527)
T PRK09275 100 RDAVSYVRDQL-GFDADEFVYE-LVDGII--GDNYPVP---DRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTA 172 (527)
T ss_pred HHHHhhcCCCC-CCCCCHHHHH-HHHHHh--cCCCCCC---CCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence 35677777643 7766666777 445553 2222222 2333334443332221 11 2 1 2 3445566678
Q ss_pred HHHhhhhh-----hccCCcEEEEcCCchhHHHhHhhhcC--CeEEEecC-------CCHHHHHHHHHHhhhhhhhccCcc
Q 011567 181 TMFSAIPC-----FCKKGDLIVADEGVHWGIQNGLYLSR--STVVYFKH-------NDMDSLRNTLERVTADNKRAKKLR 246 (483)
Q Consensus 181 a~~~ai~~-----~~~~gdiI~~~~~~h~s~~~g~~~s~--~~v~~~~~-------~d~~~Le~~l~~~~~~~~~~~~~~ 246 (483)
|+..++.+ ++++||.|++..+++..+...+.+.+ ..++.++. .|.+++++++.. ++
T Consensus 173 al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~----------~t 242 (527)
T PRK09275 173 AMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDP----------SI 242 (527)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC----------CC
Confidence 88888775 68999999999999999888777765 44444432 145566554321 25
Q ss_pred EEEEEecccCCCCCccC---hHHHHHHHHH--cCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCC
Q 011567 247 RYIVVEAVYQNSGQIAP---LDELIRLKEK--YRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATE 321 (483)
Q Consensus 247 ~~iv~e~v~~~~G~i~~---L~~l~~l~~k--~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~ 321 (483)
++|++..++|++|.+.+ +++|+++|++ +++++|.||+|+.... . ...+. ...+ +..|++.||||++|..
T Consensus 243 kai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~-~-~~s~~---~~~~-~~~I~v~SfSK~f~mt 316 (527)
T PRK09275 243 KALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD-D-FRSLF---AVLP-YNTILVYSFSKYFGAT 316 (527)
T ss_pred CEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc-c-ccCHH---HhCC-CCEEEEeehhhhccCc
Confidence 66666677899999998 7889999965 5999999999986432 1 11111 1122 3368889999999977
Q ss_pred C---ceeeccHH-----HHHHH--------------------------------HhcCCceeecCCCcHHHHHHHHHHH-
Q 011567 322 G---GFCTGSAR-----VVDHQ--------------------------------RLSSSGYVFSASLPPYLASAAITAI- 360 (483)
Q Consensus 322 G---G~i~~~~~-----~~~~~--------------------------------~~~~~~~~fs~~~~p~~~aaa~~al- 360 (483)
| ||++++++ +++.+ +.... ++..+...|...++++.++
T Consensus 317 G~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~-~~t~~~s~p~Q~a~al~~~~ 395 (527)
T PRK09275 317 GWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVAL-NHTAGLSTPQQVQMALFSLF 395 (527)
T ss_pred HhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHH-hhccCCCCHHHHHHHHHHHH
Confidence 7 99988875 33222 11111 1222223455444332111
Q ss_pred HHHhcC----cHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCC----CCchh----hHHHHHHHHHHHHH
Q 011567 361 DVLEEN----PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKST----GSMKN----DLQLLEDIADWALK 428 (483)
Q Consensus 361 ~~l~~~----~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~----~~~~~----~~~~~~~i~~~~l~ 428 (483)
..+++. .+.++.++++.+.+.+.|. + ++....+..+..+++.+.... +..-. ......+++.++++
T Consensus 396 all~~~~~~~~~~~~~~~~Rr~~l~~~Lg-~-~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~ 473 (527)
T PRK09275 396 ALLDEEDAYKKAMKDIIRRRYKALYEGLG-L-PEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAE 473 (527)
T ss_pred HHHhCchHHHHHHHHHHHHHHHHHHHHcC-C-CCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHh
Confidence 112221 2456677777777777762 2 222222334455555553210 00000 00013567888888
Q ss_pred hCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 429 EDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 429 ~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
+.||.+.|+..... .++.+|+++. ..+++++.++.+.|++++.+...
T Consensus 474 e~gV~v~PG~~Fg~----~~~~vRis~a-~~~~~~~~~~~~rl~~~l~~y~~ 520 (527)
T PRK09275 474 ETGVVLLPGGGFGG----PEWSVRVSLA-NLNEEDYAKIGKAIRKLLDEYYE 520 (527)
T ss_pred cCCEEEeCchhhCC----CCCeEEEEEe-cCCHHHHHHHHHHHHHHHHHHHH
Confidence 88999998865431 1345999984 36889999999999999877644
No 309
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=7.6e-18 Score=170.42 Aligned_cols=283 Identities=12% Similarity=0.134 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHH----hHhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~----~g~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+|++++|++.|.+.++++++|+.|+..++. +.++||.|++....|++.. ..+...|.++..++..|+++++
T Consensus 54 p~~~~le~~lA~l~g~~~~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~ 132 (390)
T PRK08064 54 PTREALEDIIAELEGGTKGFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEEVA 132 (390)
T ss_pred hhHHHHHHHHHHHhCCCCeEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHHHHH
Confidence 5678999999999999999999999999988886 6788998888887776433 3345578888888877877777
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+.+ ++++|+++.+.+++|.+.|+++|.++|+++|+++++|++|+.+.... . .. ..+|+
T Consensus 133 ~~l~~----------~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~---~----~~---~g~Di 192 (390)
T PRK08064 133 QNIKP----------NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQK---P----LD---LGADV 192 (390)
T ss_pred HhcCC----------CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccC---c----hh---hCCcE
Confidence 66532 36899999999999999999999999999999999999987553221 1 11 23489
Q ss_pred EEccccccccC----CCceeec-cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 310 VTAAMGHALAT----EGGFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 310 ~~~s~~K~lg~----~GG~i~~-~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
++.|++|.+++ .+|+++. ++++.+.++.... .++..++|..+..+...++. .+..+++..++...+.+.|
T Consensus 193 vv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~--~~g~~~~~~~a~l~~~gl~t---l~~R~~~~~~~a~~la~~L 267 (390)
T PRK08064 193 VLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQN--SFGAVLGVQDCWLVLRGLKT---LHVRLEHSSETANKIALYL 267 (390)
T ss_pred EEeecceeccCCccceeEEEEeCCHHHHHHHHHHHH--hcCCCCCHHHHHHHHcccCc---HHHHHHHHHHHHHHHHHHH
Confidence 99999999963 2476554 5677776654332 23445566666654444433 2456777788888888888
Q ss_pred ccCCCc--------------eeec---CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEE---EEeecccc---
Q 011567 385 SDIHGL--------------SIAS---NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVF---VVTSKRSM--- 441 (483)
Q Consensus 385 ~~~~~~--------------~i~~---~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~---v~~~~~~~--- 441 (483)
++.+.+ .+.. ...+.++.+.+++ .+.+.+ ++++.+++ ++.+...+
T Consensus 268 ~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~--------~~~~~~----f~~~l~l~~~~~s~G~~~sl~~ 335 (390)
T PRK08064 268 QEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS--------EEAVRQ----FVSHVKLPVFAVSLGAVESILS 335 (390)
T ss_pred hcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC--------HHHHHH----HHHhCCcceEcccCCCCcceeE
Confidence 765432 1111 1345688888842 112233 34444442 22111100
Q ss_pred ----cccCC----------C-CCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 442 ----LDKCR----------L-PVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 442 ----~~~~~----------~-~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
..++. . +..||+|+....+++.|+.+.++|+++
T Consensus 336 ~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 336 YPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred CCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 01111 1 234999999998888888888888764
No 310
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=3.4e-18 Score=173.21 Aligned_cols=213 Identities=15% Similarity=0.206 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhH----hhhcCCeEEEecCC-CHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG----LYLSRSTVVYFKHN-DMDSL 228 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g----~~~s~~~v~~~~~~-d~~~L 228 (483)
+...+||+.+|++.|.+.++.++||++|+..++.++.++||.|++....|+++... +...|.++..++.+ |++++
T Consensus 61 Ptv~~lE~~la~leg~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l 140 (432)
T PRK06702 61 PTLAAFEQKLAELEGGVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEI 140 (432)
T ss_pred cHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHH
Confidence 56889999999999999999999999999999999999999999999988876665 55668899888875 88888
Q ss_pred HHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCcee
Q 011567 229 RNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKID 308 (483)
Q Consensus 229 e~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~D 308 (483)
++.++. ++++|++|.+.++++.+.++++|+++|++||+++|+|++++...+ +.-+. ..+|
T Consensus 141 ~~~I~~----------~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~-------~~pl~---~GAD 200 (432)
T PRK06702 141 VALAND----------KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYL-------CQAFE---HGAN 200 (432)
T ss_pred HHhCCc----------CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhh-------CChhh---cCCC
Confidence 887754 367888999999999999999999999999999999999752211 11111 2348
Q ss_pred EEEccccccccC----CCceeeccH----------HHH---------------------HHHHhcCCceeecCCCcHHHH
Q 011567 309 IVTAAMGHALAT----EGGFCTGSA----------RVV---------------------DHQRLSSSGYVFSASLPPYLA 353 (483)
Q Consensus 309 i~~~s~~K~lg~----~GG~i~~~~----------~~~---------------------~~~~~~~~~~~fs~~~~p~~~ 353 (483)
|++.|++|.+++ .||.++... ++. ...+.. ....++..++|+.+
T Consensus 201 Ivv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~sp~~a 279 (432)
T PRK06702 201 IIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQ-LLRDYGNCMSPFNA 279 (432)
T ss_pred EEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHH-HHHHccCCCCHHHH
Confidence 999999999973 345554211 111 001100 01123456789988
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCc
Q 011567 354 SAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 390 (483)
Q Consensus 354 aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~ 390 (483)
..++..|+.+ +.+.++..+|+..+.+.|++.+.+
T Consensus 280 ~l~~rgL~Tl---~lR~~r~~~Na~~la~~L~~~p~V 313 (432)
T PRK06702 280 YISNIGLETL---HLRMERHSENALAVAKWLADHERI 313 (432)
T ss_pred HHHHhccCcH---HHHHHHHHHHHHHHHHHHHhCCCc
Confidence 8887777655 347778889999999999887654
No 311
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=4.8e-18 Score=173.25 Aligned_cols=213 Identities=20% Similarity=0.198 Sum_probs=159.8
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHh----hhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL----YLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~----~~s~~~v~~~~~~d~~~Le 229 (483)
+...++|+++|++.|.+.+++++||++|+..++.++.++||.|++....|.++...+ ...|.++..++.+|+++++
T Consensus 64 p~~~~le~~lA~l~g~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l~ 143 (433)
T PRK08134 64 PTVAVLEERVAALEGGVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGWR 143 (433)
T ss_pred hHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHHH
Confidence 568899999999999999999999999999999888999999998888877665443 3367888888878888888
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.++. ++++|+++.+.+++|.+.|+++|.++|++||+++|+|.+++.+.+.. . .. ..+|+
T Consensus 144 ~~i~~----------~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~---p----l~---~GaD~ 203 (433)
T PRK08134 144 AAIRP----------NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLR---P----FE---HGADL 203 (433)
T ss_pred HhcCC----------CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCC---c----hh---cCCCE
Confidence 87753 37889999999999999999999999999999999999997654321 1 11 24599
Q ss_pred EEccccccccCCC----ceeeccHH--------------------------------HHHHHHhcCCceeecCCCcHHHH
Q 011567 310 VTAAMGHALATEG----GFCTGSAR--------------------------------VVDHQRLSSSGYVFSASLPPYLA 353 (483)
Q Consensus 310 ~~~s~~K~lg~~G----G~i~~~~~--------------------------------~~~~~~~~~~~~~fs~~~~p~~~ 353 (483)
++.|.+|.+|+.| |+++.... .....+.. ....++..++|..|
T Consensus 204 vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~G~~ls~~~A 282 (433)
T PRK08134 204 VYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARRE-GLRDFGACLSPMNA 282 (433)
T ss_pred EEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHH-HHHhcCCCCCHHHH
Confidence 9999999998544 55442110 00001100 01123445778877
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCc
Q 011567 354 SAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 390 (483)
Q Consensus 354 aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~ 390 (483)
...+..|+.+ +.+.++..+++..+.+.|++.+.+
T Consensus 283 ~l~~~gL~tl---~~R~~~~~~nA~~la~~L~~~p~V 316 (433)
T PRK08134 283 WQLLQGIETL---PLRMERHVANTRKVVAFLASHPAV 316 (433)
T ss_pred HHHhcCCCcH---HHHHHHHHHHHHHHHHHHHhCCCc
Confidence 7776666554 457888889999999999887643
No 312
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=3.6e-18 Score=174.21 Aligned_cols=214 Identities=17% Similarity=0.203 Sum_probs=160.5
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHh----HhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~----g~~~s~~~v~~~~~~d~~~Le 229 (483)
+....||++||++.|.+.+++++||++|+..++.++.++||.|++....|+.... .+...|.+++.++..|+++++
T Consensus 64 p~~~~Le~~lA~leg~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l~ 143 (431)
T PRK08248 64 PTTDVFEKRIAALEGGIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENFE 143 (431)
T ss_pred chHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHHH
Confidence 4578899999999999999999999999999999999999999998887765433 345578889899888888888
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+++ ++++|+++.+.+++|.+.|+++|.++|++||+++|+|++++.+... .. +. ..+|+
T Consensus 144 ~ai~~----------~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~---~p------l~-~gaDi 203 (431)
T PRK08248 144 AAITD----------KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLL---RP------IE-HGADI 203 (431)
T ss_pred HhcCC----------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccC---Ch------hH-cCCCE
Confidence 77643 2678888999999999999999999999999999999998643211 11 11 34599
Q ss_pred EEccccccccCC----CceeeccHHHH-----------------------H--------HHHhcCCceeecCCCcHHHHH
Q 011567 310 VTAAMGHALATE----GGFCTGSARVV-----------------------D--------HQRLSSSGYVFSASLPPYLAS 354 (483)
Q Consensus 310 ~~~s~~K~lg~~----GG~i~~~~~~~-----------------------~--------~~~~~~~~~~fs~~~~p~~~a 354 (483)
++.|++|.+|+. ||+++.+.+.. + +..........+..++|..|.
T Consensus 204 vv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~ 283 (431)
T PRK08248 204 VVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSF 283 (431)
T ss_pred EEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHH
Confidence 999999999854 46665433210 0 000000112234567888888
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCc
Q 011567 355 AAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 390 (483)
Q Consensus 355 aa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~ 390 (483)
.....|+.+ +.+.++..+++..+.+.|++.+++
T Consensus 284 l~~rgl~tl---~~R~~~~~~nA~~la~~L~~~p~v 316 (431)
T PRK08248 284 LLLQGLETL---HLRMERHSENALAVAKFLEEHEAV 316 (431)
T ss_pred HHhcCcCcH---HHHHHHHHHHHHHHHHHHHhCCCc
Confidence 776666554 347788889999999999887754
No 313
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=6e-18 Score=170.28 Aligned_cols=211 Identities=12% Similarity=0.140 Sum_probs=158.3
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHh----HhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~----g~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+|+++||++.|.+.++++++|++++..++ .+.++||.|++..+.|++... .+...|.++..++..|+++++
T Consensus 50 p~~~~Le~~lA~l~g~~~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~ 128 (377)
T PRK07671 50 PTRAALEELIAVLEGGHAGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEEVE 128 (377)
T ss_pred hHHHHHHHHHHHHhCCCceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHHHH
Confidence 567899999999999999999999998877655 577899999988887775443 234457888888877888887
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+++ ++++|++|.+.+++|.+.++++|.++|+++|+++++||+++.+..++ . .. ..+|+
T Consensus 129 ~ai~~----------~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~---p----~~---~g~Di 188 (377)
T PRK07671 129 EAIRP----------NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQS---P----IS---LGADI 188 (377)
T ss_pred HhcCC----------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCC---h----hh---hCCeE
Confidence 77643 36899999999999999999999999999999999999987543321 1 11 23489
Q ss_pred EEccccccccC----CCceeec-cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 310 VTAAMGHALAT----EGGFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 310 ~~~s~~K~lg~----~GG~i~~-~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
++.|++|++++ .||+++. ++++.+.++.... ..++.++|..+..++..++.+. ..+++..++...+.+.|
T Consensus 189 vv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~--~~g~~~~~~~a~l~~~~l~tl~---~R~~~~~~na~~la~~L 263 (377)
T PRK07671 189 VLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQN--STGGILGPQDSWLLLRGLKTLG---IRMEEHETNSRAIAEFL 263 (377)
T ss_pred EEecCcccccCCccceeEEEEeCcHHHHHHHHHHHH--hhcCCCCHHHHHHHHcCcChHH---HHHHHHHHHHHHHHHHH
Confidence 99999999973 3576554 5667665543221 1234567877777666655543 36777788888999988
Q ss_pred ccCCCc
Q 011567 385 SDIHGL 390 (483)
Q Consensus 385 ~~~~~~ 390 (483)
++.+++
T Consensus 264 ~~~~~v 269 (377)
T PRK07671 264 NNHPAV 269 (377)
T ss_pred HcCCCe
Confidence 876644
No 314
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.81 E-value=4.6e-18 Score=170.07 Aligned_cols=227 Identities=13% Similarity=0.100 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhc--CCeEEEecCCCHHHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLS--RSTVVYFKHNDMDSLRNT 231 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s--~~~v~~~~~~d~~~Le~~ 231 (483)
+...+||++||++.|.+.+++++||.+|+..++. +.++||.|++....++....-+... ...+......|++++++.
T Consensus 54 p~~~~le~~lA~leg~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 132 (364)
T PRK07269 54 PTRAKLEETLAAIESADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYANTEEELIAA 132 (364)
T ss_pred ccHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEecCCHHHHHHh
Confidence 4568899999999999999999999999998884 5689998888877766544332221 111211112477777776
Q ss_pred HHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEE
Q 011567 232 LERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVT 311 (483)
Q Consensus 232 l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~ 311 (483)
++. ++++|++|.+.+++|.+.++++|+++|+++|+++++|++++.+..+ +. .+ ..+|+++
T Consensus 133 i~~----------~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~---~p----l~---~gaDivv 192 (364)
T PRK07269 133 IEE----------DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQ---RP----IE---LGADIVL 192 (364)
T ss_pred cCc----------CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC---Cc----hh---hCCcEEE
Confidence 643 3689999999999999999999999999999999999997543322 11 11 3448999
Q ss_pred ccccccccC----CCceeec-cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhcc
Q 011567 312 AAMGHALAT----EGGFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSD 386 (483)
Q Consensus 312 ~s~~K~lg~----~GG~i~~-~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~ 386 (483)
.|++|.+++ .||++++ ++++.+.++... . ..+..++|+.++.++..|+.+ +..+++.++++..+.+.|++
T Consensus 193 ~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~-~-~~G~~~s~~~a~l~~~~L~tL---~~r~~~~~~na~~~a~~L~~ 267 (364)
T PRK07269 193 HSATKYLSGHNDVLAGVVVTNDLELYEKLFYNL-N-TTGAVLSPFDSYLLMRGLKTL---SLRMERSTANAQEVVAFLKK 267 (364)
T ss_pred ecCceeccCCCcccceEEEeCcHHHHHHHHHHH-H-HhCCCCCHHHHHHHHcCCCcH---HHHHHHHHHHHHHHHHHHHh
Confidence 999999974 4688766 566666654221 1 223457899888888777765 34778888999999999988
Q ss_pred CCCce-eecCCCCCEEEEEec
Q 011567 387 IHGLS-IASNPESPIVFLILE 406 (483)
Q Consensus 387 ~~~~~-i~~~~~~~i~~l~l~ 406 (483)
.+++. +.-++.+.++.+.+.
T Consensus 268 ~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 268 SPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred CCCccEEeCCCcCcEEEEEEC
Confidence 77653 443556788888874
No 315
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.81 E-value=3.1e-17 Score=168.17 Aligned_cols=338 Identities=13% Similarity=0.106 Sum_probs=193.1
Q ss_pred eEEEeecCCCCCCCC-ChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----CC---CCEEEe-cccHH
Q 011567 110 EVVNFASANYLGLIG-HEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT---PDSILY-SYGLS 180 (483)
Q Consensus 110 ~~id~~s~~~lG~~~-~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g~---e~~i~~-~sG~~ 180 (483)
..+||..++..-... .+.+.+++.+.++..... ..-..|+...-..+|++.||+++ |. ++.|+. +++.+
T Consensus 31 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~ 108 (416)
T PRK09440 31 GAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLT--EALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQS 108 (416)
T ss_pred CceeccCCCCCccCCHHHHHHHHHHHHhcCcccc--cccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHH
Confidence 468988875532211 124555655555431100 00001222222345555555554 42 244555 55558
Q ss_pred HHHhhhhhhcc-----CCcEEEE-cCCchhHHHhHhhhc------CCeEEEecC------CCHHHHHHHHHHhhhhhhhc
Q 011567 181 TMFSAIPCFCK-----KGDLIVA-DEGVHWGIQNGLYLS------RSTVVYFKH------NDMDSLRNTLERVTADNKRA 242 (483)
Q Consensus 181 a~~~ai~~~~~-----~gdiI~~-~~~~h~s~~~g~~~s------~~~v~~~~~------~d~~~Le~~l~~~~~~~~~~ 242 (483)
++..++.++++ +||.|++ ..+++..+....... +..+...+. -|++.|+ ...
T Consensus 109 al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~-----~~~----- 178 (416)
T PRK09440 109 AFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH-----IDE----- 178 (416)
T ss_pred HHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc-----cCC-----
Confidence 88888888884 5888888 677776655433211 122222221 1444444 111
Q ss_pred cCccEEEEEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCC--CceeEEEcccccc
Q 011567 243 KKLRRYIVVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPV--DKIDIVTAAMGHA 317 (483)
Q Consensus 243 ~~~~~~iv~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~--~~~Di~~~s~~K~ 317 (483)
+++++++...+|++|.+.+ +++|+++|++|++++|+||+|+..... . .+.+..+ .+.-|+++||||+
T Consensus 179 --~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-----~-~~~~~~~~~~~~vI~~~SfSK~ 250 (416)
T PRK09440 179 --DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPG-----I-IFSEATPLWNPNIILCMSLSKL 250 (416)
T ss_pred --CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCC-----c-chhhcCccccCCeEEEeccccc
Confidence 2567777777899999998 788999999999999999999642111 0 0011111 2235888999996
Q ss_pred ccCCC---ceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHh---cCc-HHHHHHHHHHHHHHHhhccC-C-
Q 011567 318 LATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE---ENP-DLITKLKKNTAILRTGLSDI-H- 388 (483)
Q Consensus 318 lg~~G---G~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~---~~~-~~~~~l~~~~~~l~~~L~~~-~- 388 (483)
+.+| ||+++++++++.+......+..+ .+.+...++.++++.-. ... .+++.++++.+.+++.|.+. +
T Consensus 251 -~~pGlRiG~~i~~~~l~~~~~~~~~~~~~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~ 327 (416)
T PRK09440 251 -GLPGVRCGIVIADEEIIEALSNMNGIISLA--PGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPD 327 (416)
T ss_pred -CCCcceEEEEeCCHHHHHHHHHHHHHhccC--CCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 6555 99999999988876544333332 34455555555553111 101 13444555666666666542 2
Q ss_pred -CceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc--ccCC--CCCceEEEccCCCCHHH
Q 011567 389 -GLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML--DKCR--LPVGIRLFVSAAHSEAD 463 (483)
Q Consensus 389 -~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~--~~~~--~~~~lRi~~~~~~t~ed 463 (483)
++.+..+..+.++++.++.... + ..++++.+ +++||.+.++..... .... ....+||+++. ++++
T Consensus 328 ~~~~~~~p~gg~fiw~~~~~~~~----~---~~~~~~~l-~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~--~~~~ 397 (416)
T PRK09440 328 EPCLIHKPEGAIFLWLWFKDLPI----T---TEELYQRL-KARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ--DDEE 397 (416)
T ss_pred CCeEEecCCCceEEEEECCCCCC----C---HHHHHHHH-HHCCEEEechHhhCCCCccccCCcCceEEEEecC--CHHH
Confidence 3454445567888888753110 1 22456654 557999998754321 1000 01359999873 7999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 011567 464 LVKACESLKRISAVVLR 480 (483)
Q Consensus 464 i~~~~~~l~~~~~~~~~ 480 (483)
+++++++|++++++...
T Consensus 398 l~~~i~~l~~~~~~~~~ 414 (416)
T PRK09440 398 IEKGIAILAEEVEKAYA 414 (416)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999887543
No 316
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.81 E-value=8.8e-18 Score=183.32 Aligned_cols=306 Identities=13% Similarity=0.117 Sum_probs=205.0
Q ss_pred cChHHHHHHHHHHHhhhCCCCEEEecccH----HHHHhhhhhhccC-Cc----EEEEcCCchhHHHhHhhhcCCeEEEec
Q 011567 151 GTIDVHLDCEARIAKFLGTPDSILYSYGL----STMFSAIPCFCKK-GD----LIVADEGVHWGIQNGLYLSRSTVVYFK 221 (483)
Q Consensus 151 g~~~~~~~l~~~La~~~g~e~~i~~~sG~----~a~~~ai~~~~~~-gd----iI~~~~~~h~s~~~g~~~s~~~v~~~~ 221 (483)
|..+...++++.|++++|.+.+++..+++ .|+..+++++.+. || +|+++...|++........|.+++.++
T Consensus 565 g~~~~~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~ 644 (993)
T PLN02414 565 GYQEMFEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVG 644 (993)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEec
Confidence 55667789999999999997777664444 6888889988755 77 999999999999888888899998887
Q ss_pred CC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCcc
Q 011567 222 HN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGL 296 (483)
Q Consensus 222 ~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~ 296 (483)
.+ |+++|++.++...+ ++++|++....+.+|...|+++|.++|+++|+++++|.++..+..+.
T Consensus 645 ~d~~G~vDle~L~~~i~~~~~-------~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l----- 712 (993)
T PLN02414 645 TDAKGNINIEELRKAAEAHKD-------NLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGL----- 712 (993)
T ss_pred cCCCCCcCHHHHHHHHhccCC-------CeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCc-----
Confidence 64 78899988875433 27888888888888999999999999999999999999998764432
Q ss_pred ccccCCCCCceeEEEcccccccc-CC-----C-ceeeccHHHHHHHHhcC----Ccee--ec----CCCc--HH-HHHHH
Q 011567 297 TEHCGVPVDKIDIVTAAMGHALA-TE-----G-GFCTGSARVVDHQRLSS----SGYV--FS----ASLP--PY-LASAA 356 (483)
Q Consensus 297 ~~~~~v~~~~~Di~~~s~~K~lg-~~-----G-G~i~~~~~~~~~~~~~~----~~~~--fs----~~~~--p~-~~aaa 356 (483)
.. ....++|++++|.+|+|+ +. | |++..++.+...+-... .++. +. ++.+ ++ .+.++
T Consensus 713 ~~---p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l 789 (993)
T PLN02414 713 TS---PGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALIL 789 (993)
T ss_pred CC---ccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHH
Confidence 11 111345999999999885 22 1 67777766554432110 0000 00 1111 22 22333
Q ss_pred HHHHHHHhc---C--cHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCC
Q 011567 357 ITAIDVLEE---N--PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDG 431 (483)
Q Consensus 357 ~~al~~l~~---~--~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~G 431 (483)
..++.++.. + .+..++...++.+++++|.+..++.+.++ .+++++=.+-+-............+++++++ ++|
T Consensus 790 ~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~-~~~~~hEfv~~~~~l~~~~g~~~~di~krL~-d~G 867 (993)
T PLN02414 790 PISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGK-NGTCAHEFIIDLRPFKNTAGIEPEDVAKRLM-DYG 867 (993)
T ss_pred HHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCC-CCCeeeeEEEeccccccccCCCHHHHHHHHH-HcC
Confidence 344444432 1 23366677889999999977434433322 2343222111100000000011356888766 569
Q ss_pred EEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 432 VFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 432 v~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
+......+|. ++.+|++++-..|++|||+++++++.+..++-
T Consensus 868 ihapt~~~pv------~~~lmiepTE~~skeelDrf~~al~~i~~e~~ 909 (993)
T PLN02414 868 FHAPTMSWPV------PGTLMIEPTESESKAELDRFCDALISIREEIA 909 (993)
T ss_pred cEEeeecccc------CCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 9876654431 35699999999999999999999998887764
No 317
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=6.2e-18 Score=172.28 Aligned_cols=213 Identities=17% Similarity=0.200 Sum_probs=159.7
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHH----hHhhhcCCeEEEec-CCCHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFK-HNDMDSL 228 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~----~g~~~s~~~v~~~~-~~d~~~L 228 (483)
+...++|++++++.|.+.+++++||++|+..++.++.++||.|++....|+++. ..+...|.++..++ .+|++++
T Consensus 69 pt~~~le~~la~l~g~~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e~l 148 (437)
T PRK05613 69 PTVEALENRIASLEGGVHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPESW 148 (437)
T ss_pred hHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHHHH
Confidence 667899999999999999999999999999999888899999998888888764 33455688888886 4577777
Q ss_pred HHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCcee
Q 011567 229 RNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKID 308 (483)
Q Consensus 229 e~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~D 308 (483)
++.++. .+++|++|...+++|.+.|+++|.++|+++|+++|+|.+++.|.+- +.. . ..+|
T Consensus 149 ~~~l~~----------~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~---~p~--~-----~GaD 208 (437)
T PRK05613 149 QAAVQP----------NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALV---RPL--E-----LGAD 208 (437)
T ss_pred HHhCCc----------cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCcccccc---ChH--H-----hCCC
Confidence 776643 2678888998888999999999999999999999999999765431 111 1 2349
Q ss_pred EEEccccccccCC----CceeeccHHHH------------------------------H-----HHHhcCCceeecCCCc
Q 011567 309 IVTAAMGHALATE----GGFCTGSARVV------------------------------D-----HQRLSSSGYVFSASLP 349 (483)
Q Consensus 309 i~~~s~~K~lg~~----GG~i~~~~~~~------------------------------~-----~~~~~~~~~~fs~~~~ 349 (483)
+++.|++|.+++. ||+++++.... + ..+. .....+++.++
T Consensus 209 ivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~~~~ 287 (437)
T PRK05613 209 VVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARA-GLLRDTGATLS 287 (437)
T ss_pred EEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHH-HHHHhcCCCCC
Confidence 9999999999853 57776432200 0 0000 00112345678
Q ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCc
Q 011567 350 PYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 390 (483)
Q Consensus 350 p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~ 390 (483)
|..|......|+.+ +.+.++..+++..+.+.|++.|.+
T Consensus 288 p~~a~l~~rgl~TL---~lR~~~~~~nA~~lA~~L~~hp~V 325 (437)
T PRK05613 288 PFNAWVTAQGLDTL---SLRLERHNENAIKVAEFLNNHEKV 325 (437)
T ss_pred HHHHHHHHcccCcH---HHHHHHHHHHHHHHHHHHHcCCCc
Confidence 88888777666655 347788889999999999887654
No 318
>PLN02368 alanine transaminase
Probab=99.81 E-value=7.8e-18 Score=170.79 Aligned_cols=242 Identities=12% Similarity=0.137 Sum_probs=162.9
Q ss_pred HHHHHHHHhhh----CC---CCEEEe-cccHHHHHhhhhhhc-cCCcEEEEcCCchhHHHhHhhhcCCeEEEecC-----
Q 011567 157 LDCEARIAKFL----GT---PDSILY-SYGLSTMFSAIPCFC-KKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH----- 222 (483)
Q Consensus 157 ~~l~~~La~~~----g~---e~~i~~-~sG~~a~~~ai~~~~-~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~----- 222 (483)
.+|++.||+++ |. ++.|++ +++.+++..++.++. .+||.|++..+++..+...+...|.+++.++.
T Consensus 110 ~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~ 189 (407)
T PLN02368 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESEN 189 (407)
T ss_pred HHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccC
Confidence 45556666554 52 244555 555678888899887 69999999999999999999999988877653
Q ss_pred --CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCC--c
Q 011567 223 --NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGR--G 295 (483)
Q Consensus 223 --~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~--g 295 (483)
-|+++|++.++..... ..+++++++...+|++|.+.+ +++|+++|++||+++|.||+|+..+++.... .
T Consensus 190 ~~~d~~~le~~i~~~~~~----~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s 265 (407)
T PLN02368 190 WGLDVNNLRQSVAQARSK----GITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFIS 265 (407)
T ss_pred CCCCHHHHHHHHHHHhhc----CCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccc
Confidence 2677888777642211 012555555556889999998 7888999999999999999998766542111 1
Q ss_pred ccccc-CCCC----CceeEEEccccccc-cCCC---ceee---ccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHH-
Q 011567 296 LTEHC-GVPV----DKIDIVTAAMGHAL-ATEG---GFCT---GSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDV- 362 (483)
Q Consensus 296 ~~~~~-~v~~----~~~Di~~~s~~K~l-g~~G---G~i~---~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~- 362 (483)
+.+.. ++.+ ...-|+++||||++ |.+| ||++ +++++++.+.... ...++ .+.+...++.++++.
T Consensus 266 ~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~-~~~~~--~~~~~Q~aa~~~l~~~ 342 (407)
T PLN02368 266 AKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVA-SIALS--PNVSGQIFMGLMVNPP 342 (407)
T ss_pred HHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHh-cccCC--CCcHHHHHHHHHhCCC
Confidence 11111 1211 22468889999998 6666 9987 5788888776542 22232 345555556666641
Q ss_pred ----------HhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEe
Q 011567 363 ----------LEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLIL 405 (483)
Q Consensus 363 ----------l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l 405 (483)
.++..++++.++++++.+.+.|++++|+.+..+.++.+++..+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i 395 (407)
T PLN02368 343 KPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQI 395 (407)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCC
Confidence 1111246778899999999999998898876554555555444
No 319
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.80 E-value=1.6e-17 Score=166.65 Aligned_cols=278 Identities=15% Similarity=0.136 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhH----hhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG----LYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g----~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+|+++||++. .++++++++|++|+..++.++.++||.|++..+.|+.+... +...|.+++.++.++...
T Consensus 51 p~~~~Le~~lA~l~-~~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~-- 127 (366)
T PRK07582 51 PTWRALEAALGELE-GAEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE-- 127 (366)
T ss_pred ccHHHHHHHHHHHc-CCCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH--
Confidence 45789999999999 68899999999999999999999999888877766555433 234578888887765322
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
.. .+ .+++|+++.+.+++|.+.|+++|.++|+++|+++++|++|... .|. .. ... .+|+
T Consensus 128 ~~----~~-------~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~-~~~---~p---~~~---g~Di 186 (366)
T PRK07582 128 AA----LA-------GADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATP-LGQ---RP---LEL---GADL 186 (366)
T ss_pred Hh----cc-------CceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCc-ccc---Cc---hhc---CCcE
Confidence 11 11 3678889999999999999999999999999999999998532 221 11 111 3489
Q ss_pred EEccccccccC-C---Cceeec-cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 310 VTAAMGHALAT-E---GGFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 310 ~~~s~~K~lg~-~---GG~i~~-~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
+++|++|++++ . +||+++ ++++.+.++.... ..+..++|+.+..+...++.+ +...++..+++..+.+.|
T Consensus 187 vv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~--~~g~~~~~~~a~l~~r~l~tl---~~R~~~~~~na~~la~~L 261 (366)
T PRK07582 187 VVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRL--LAGAIPGPFEAWLAHRSLGTL---GLRFARQCANALAVAELL 261 (366)
T ss_pred EEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHH--HhCCCCCHHHHHHHHhccccH---HHHHHHHHHHHHHHHHHH
Confidence 99999999963 2 488876 4677666553221 113346788877776666644 346688889999999999
Q ss_pred ccCCCcee-e-----cCC-----------CCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecc---ccc-c
Q 011567 385 SDIHGLSI-A-----SNP-----------ESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKR---SML-D 443 (483)
Q Consensus 385 ~~~~~~~i-~-----~~~-----------~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~---~~~-~ 443 (483)
++.+.+.- . +++ .+.++.+.+++ ... +.+++++.+++...... .++ .
T Consensus 262 ~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~--------~~~----~~~~~~~l~~~~~~~s~G~~~sl~~ 329 (366)
T PRK07582 262 AGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELAD--------AAA----AERFVAASRLVVAATSFGGVHTSAD 329 (366)
T ss_pred HhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCC--------HHH----HHHHHHhCCcceecccCCCccchhh
Confidence 88775432 1 112 35688888841 111 22344444554431111 111 0
Q ss_pred -----cCCCC-CceEEEccCCCCHHHHHHHHHHHH
Q 011567 444 -----KCRLP-VGIRLFVSAAHSEADLVKACESLK 472 (483)
Q Consensus 444 -----~~~~~-~~lRi~~~~~~t~edi~~~~~~l~ 472 (483)
....+ .-||+++....+++.|+.+.++|+
T Consensus 330 ~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 330 RRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred hHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 00112 349999999877777777666664
No 320
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.80 E-value=1.4e-17 Score=164.94 Aligned_cols=330 Identities=20% Similarity=0.225 Sum_probs=194.9
Q ss_pred eEEEeecC-CCCCCCCChHHHHHHHHHHH-hcCCCCCCCCCcccChHHHHH----HHHHHHhhhCCC----CEEE-eccc
Q 011567 110 EVVNFASA-NYLGLIGHEKLLESCTSALE-KYGVGSCGPRGFYGTIDVHLD----CEARIAKFLGTP----DSIL-YSYG 178 (483)
Q Consensus 110 ~~id~~s~-~~lG~~~~p~i~~a~~~~l~-~~g~g~~~~~~~~g~~~~~~~----l~~~La~~~g~e----~~i~-~~sG 178 (483)
+.|++..+ |+ ..|.+.++....+. +|..|..|.|.+.|+ +...+ ..+++.++|+.+ .+-+ .-||
T Consensus 21 ~~l~LiaSEN~----~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~-~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SG 95 (399)
T PF00464_consen 21 STLNLIASENY----MSPAVREALGSDLTNKYAEGYPGKRYYGGC-EYIDEIEELAIERAKELFGAEPKEWYANVQPHSG 95 (399)
T ss_dssp HSEE-CTT---------HHHHHHHTSGGGGS-TTEETTEESSSST-HHHHHHHHHHHHHHHHHHT-STTTEEEE---SSH
T ss_pred cCccccCcccc----cCHHHHHHhCCcceeeccccCCCcccccCc-chhhHHHHHHHHHHHHHhCCCcccceEEeecCCc
Confidence 46777765 55 45777777666554 477777777755554 33333 456677788988 5543 3899
Q ss_pred HHHHHhhhhhhccCCcEEEEcCCchhHHHh-Hhh--h-----cC--CeEEEecCC------CHHHHHHHHHHhhhhhhhc
Q 011567 179 LSTMFSAIPCFCKKGDLIVADEGVHWGIQN-GLY--L-----SR--STVVYFKHN------DMDSLRNTLERVTADNKRA 242 (483)
Q Consensus 179 ~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~-g~~--~-----s~--~~v~~~~~~------d~~~Le~~l~~~~~~~~~~ 242 (483)
+.|+.++..+++++||.|+.-...|+.... +.. . ++ -+.+.++.+ |++.+++++++..
T Consensus 96 s~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~k------ 169 (399)
T PF00464_consen 96 SQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHK------ 169 (399)
T ss_dssp HHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH-------
T ss_pred hHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcC------
Confidence 999999999999999998876555543221 111 1 11 234444432 8899999988865
Q ss_pred cCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cccCCCCCceeEEEccccccc-cC
Q 011567 243 KKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EHCGVPVDKIDIVTAAMGHAL-AT 320 (483)
Q Consensus 243 ~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~~~v~~~~~Di~~~s~~K~l-g~ 320 (483)
.++|++.+-. .-...|+++++++|++.|++|++|-+|..|.+. .|.. .-+ ..+|++++|.+|+| |+
T Consensus 170 ---PklIi~G~S~--y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa---~g~~~~P~----~~ADvvt~sThKtl~GP 237 (399)
T PF00464_consen 170 ---PKLIICGASS--YPRPIDFKRFREIADEVGAYLMADISHIAGLIA---GGLFPNPF----PYADVVTGSTHKTLRGP 237 (399)
T ss_dssp ----SEEEEE-SS--TSS---HHHHHHHHHHTT-EEEEE-TTTHHHHH---TTSS--GC----CTSSEEEEESSGGG-SS
T ss_pred ---CCEEEECchh--ccCccCHHHHHHHHHhcCcEEEeccccccccee---hheecCcc----ccceEEEeecccccccc
Confidence 3577775422 234457999999999999999999999877654 1222 112 23699999999999 68
Q ss_pred CCceeecc--------------HHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHhhc
Q 011567 321 EGGFCTGS--------------ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLS 385 (483)
Q Consensus 321 ~GG~i~~~--------------~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~-~~~~~~~~l~~~~~~l~~~L~ 385 (483)
.||+++.+ .++.+.+...-.+...++..+...++.|.+..+.+. +..+..+++.+|++.|.+.|.
T Consensus 238 rggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~ 317 (399)
T PF00464_consen 238 RGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQ 317 (399)
T ss_dssp S-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999888 677777765433333332222222333333333232 225688899999999999999
Q ss_pred cCCCceeec-CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEcc----CCCC
Q 011567 386 DIHGLSIAS-NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVS----AAHS 460 (483)
Q Consensus 386 ~~~~~~i~~-~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~----~~~t 460 (483)
+. |+++.. ..++.++.+.+.... .+. .-+.+.|++.||.+.....|.-.....+.||||..+ ....
T Consensus 318 ~~-G~~v~~ggTd~H~vlvd~~~~~----~~g----~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~ 388 (399)
T PF00464_consen 318 ER-GFKVVTGGTDNHQVLVDLRSFG----IDG----KEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMK 388 (399)
T ss_dssp HT-T-EEGGGS-SSSEEEEEGGGGT----S-H----HHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--
T ss_pred hC-CcEEEECCCCCCeEEEEecccc----cch----HHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCC
Confidence 85 999874 357888888875321 011 224456788899998765544322223578999754 3567
Q ss_pred HHHHHHHHHHH
Q 011567 461 EADLVKACESL 471 (483)
Q Consensus 461 ~edi~~~~~~l 471 (483)
++|++++.+.|
T Consensus 389 e~dm~~iA~~I 399 (399)
T PF00464_consen 389 EEDMKEIAELI 399 (399)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhC
Confidence 88888776654
No 321
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=2e-17 Score=165.88 Aligned_cols=213 Identities=12% Similarity=0.070 Sum_probs=163.5
Q ss_pred hHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHh----HhhhcCCeEEEecCCCHHHH
Q 011567 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSL 228 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~----g~~~s~~~v~~~~~~d~~~L 228 (483)
.+....|++.|+.+-+.+.+++++||.+|+..++.++.++||.|++..+.|++... .+...|.++..++..+.+.+
T Consensus 63 nPt~~~Le~~la~le~~~~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l 142 (395)
T PRK05967 63 TPTTDALCKAIDALEGSAGTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGI 142 (395)
T ss_pred ChHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHH
Confidence 46778899999999998999999999999999999999999999998888877653 34566788888876666667
Q ss_pred HHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCcee
Q 011567 229 RNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKID 308 (483)
Q Consensus 229 e~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~D 308 (483)
++.+++ ++++|++|.+.|+++.+.|+++|+++|+++|+++++|++++...+-+ . .. ..+|
T Consensus 143 ~~al~~----------~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~---p----l~---~GaD 202 (395)
T PRK05967 143 AKLMRP----------NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYFR---P----LD---FGVD 202 (395)
T ss_pred HHhcCc----------CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceecC---h----hH---cCCC
Confidence 666643 37899999999999999999999999999999999999997543221 1 11 2348
Q ss_pred EEEccccccccCC----CceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 309 IVTAAMGHALATE----GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 309 i~~~s~~K~lg~~----GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
+++.|++|.+++. ||.++++++..+.++.. ....+..++|..|...+..++-+ .-+.++..+++..+.+.|
T Consensus 203 ivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~--~~~~G~~~~p~da~l~~rgl~Tl---~lR~~~~~~na~~lA~~L 277 (395)
T PRK05967 203 ISIHAATKYPSGHSDILLGTVSANEKCWPQLLEA--HGTLGLCAGPDDTYQILRGLRTM---GIRLEHHRKSALEIARWL 277 (395)
T ss_pred EEEEecccccCCCCCeeEEEEEcCHHHHHHHHHH--HHHcCCCCCHHHHHHHHcCcccH---HHHHHHHHHHHHHHHHHH
Confidence 9999999999742 47777777765554322 11235567888877776666555 346777788888888888
Q ss_pred ccCCCc
Q 011567 385 SDIHGL 390 (483)
Q Consensus 385 ~~~~~~ 390 (483)
++.|.+
T Consensus 278 ~~hp~v 283 (395)
T PRK05967 278 EGRPDV 283 (395)
T ss_pred HhCCCC
Confidence 876644
No 322
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.80 E-value=2.5e-17 Score=169.81 Aligned_cols=338 Identities=14% Similarity=0.106 Sum_probs=196.4
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHH-HHHHhhhC----CC---CEEEecccHHH
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCE-ARIAKFLG----TP---DSILYSYGLST 181 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~-~~La~~~g----~e---~~i~~~sG~~a 181 (483)
.++|++.+.+ ++. .|.+..++.+.+. +.+.+.| .|..+..+++. +.+.+.++ .+ +.++.+++++|
T Consensus 95 ~~i~l~~g~p-~~~-~~~~~~~~~~~~~--~~~Y~~p---~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~a 167 (521)
T TIGR03801 95 DIISYVIDQL-GFD-PDAFLYEMCDGII--GDNYPVP---DRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAA 167 (521)
T ss_pred HHHhhcCCCC-CCC-CCHHHHHHHHHhh--cCCCCCC---CCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHH
Confidence 5677776633 664 4566666666653 2222111 12223333333 23333322 12 34455667788
Q ss_pred HHhhhhh-----hccCCcEEEEcCCchhHHHhHhhhc--CCeEEEecCC------------CHHHHHHHHHHhhhhhhhc
Q 011567 182 MFSAIPC-----FCKKGDLIVADEGVHWGIQNGLYLS--RSTVVYFKHN------------DMDSLRNTLERVTADNKRA 242 (483)
Q Consensus 182 ~~~ai~~-----~~~~gdiI~~~~~~h~s~~~g~~~s--~~~v~~~~~~------------d~~~Le~~l~~~~~~~~~~ 242 (483)
+..++.+ ++.+||.|++..+++..+...+.+. +.+++.++.. |.+++++++. .
T Consensus 168 l~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~---~----- 239 (521)
T TIGR03801 168 MCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD---P----- 239 (521)
T ss_pred HHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC---C-----
Confidence 8887766 7899999999999998888777665 4565555421 3345554322 1
Q ss_pred cCccEEEEEecccCCCCCccC---hHHHHHHHHHc--CcEEEEeCccccccccCCCCccccccCCCCCceeEEEcccccc
Q 011567 243 KKLRRYIVVEAVYQNSGQIAP---LDELIRLKEKY--RFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHA 317 (483)
Q Consensus 243 ~~~~~~iv~e~v~~~~G~i~~---L~~l~~l~~k~--~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~ 317 (483)
++++|++..+.|++|.+.+ +++|+++|++| ++++|.||+|+.... . ...+.+ ..+ +..|++.|+||+
T Consensus 240 --~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~-~-~~sl~~---~~~-~~vI~v~SfSK~ 311 (521)
T TIGR03801 240 --SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD-D-FRSLFA---ELP-YNTIGVYSFSKY 311 (521)
T ss_pred --CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc-c-ccchhh---hCC-CCEEEEEcchhh
Confidence 2566666566889999988 78889999987 999999999985432 1 111212 122 235888999999
Q ss_pred ccCCC---ceeeccHH-HHH------------HH------------------------HhcCCceeecCCCcHHHH--H-
Q 011567 318 LATEG---GFCTGSAR-VVD------------HQ------------------------RLSSSGYVFSASLPPYLA--S- 354 (483)
Q Consensus 318 lg~~G---G~i~~~~~-~~~------------~~------------------------~~~~~~~~fs~~~~p~~~--a- 354 (483)
+|..| ||++++++ +.+ .+ +......+.+.+ .|... +
T Consensus 312 fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s-~p~Q~q~al 390 (521)
T TIGR03801 312 FGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLS-TPQQVQMAL 390 (521)
T ss_pred ccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCC-cHHHHHHHH
Confidence 99777 99988754 211 11 111111222222 23333 2
Q ss_pred -HHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCcee--ecCCCCCEEEEEecCCCCC---chh-----hHHHHHHH
Q 011567 355 -AAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSI--ASNPESPIVFLILEKSTGS---MKN-----DLQLLEDI 422 (483)
Q Consensus 355 -aa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i--~~~~~~~i~~l~l~~~~~~---~~~-----~~~~~~~i 422 (483)
++.+.++.-+. ..+..+.++++.+.+.+.| |+.+ ..+..+..+++.+...... .+- +.....++
T Consensus 391 ~a~~all~~~~~y~~~~~~~~~~R~~~l~~~L----g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~ 466 (521)
T TIGR03801 391 FSLFALMDKENAYKAETKDICRRREKLLFRGL----GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDV 466 (521)
T ss_pred HHHHHHhccchhHHHHHHHHHHHHHHHHHHhc----CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHH
Confidence 22223321111 1235666777777777776 3332 2233345566665421000 000 00013578
Q ss_pred HHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 423 ADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 423 ~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
+.+++++.||.+.|+..... ..+.+|+++ +..++++++++.+.|++++.+...
T Consensus 467 ~~~L~~e~gV~v~PG~~Fg~----~~~~vRisl-a~l~~~~~~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 467 LFRLAEETGIVLLPGGGFGG----PEWSVRVSL-ANLNEYDYAEIGRAIRKILDEYYE 519 (521)
T ss_pred HHHHHHhCCEEEeCchhcCC----CCCeEEEEe-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 88888889999998865432 124599998 347899999999999999877643
No 323
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.80 E-value=1.9e-18 Score=168.62 Aligned_cols=219 Identities=17% Similarity=0.235 Sum_probs=154.7
Q ss_pred hHHHHHHHHHHHhhhCCCCEEEe-cccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC---------
Q 011567 153 IDVHLDCEARIAKFLGTPDSILY-SYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH--------- 222 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e~~i~~-~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~--------- 222 (483)
.....++++.+|+++|.++++++ +++++++..++.+++++||.|++++.+|.++..++...|.++++++.
T Consensus 58 ~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~~~~ 137 (294)
T cd00615 58 TGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPYYGIA 137 (294)
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCcccCcC
Confidence 45688999999999999988875 55568899999999999999999999999999999999988776532
Q ss_pred --CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCcccccc-ccCCCCccccc
Q 011567 223 --NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGV-LGRSGRGLTEH 299 (483)
Q Consensus 223 --~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~-lg~~G~g~~~~ 299 (483)
.|++++++.+++... .+.++++.| +.+|.+.|+++|+++|++||+++|+||+|+.+. ++.....
T Consensus 138 ~~i~~~~l~~~l~~~~~-------~k~v~l~~p--~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~---- 204 (294)
T cd00615 138 GGIPPETFKKALIEHPD-------AKAAVITNP--TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPS---- 204 (294)
T ss_pred CCCCHHHHHHHHHhCCC-------ceEEEEECC--CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCc----
Confidence 367888888765221 234455544 357999999999999999999999999997432 2111110
Q ss_pred cCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhcCCceee-cCCCcHHHHHHHHHHHHHHh-cCcHHHHHHHH
Q 011567 300 CGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVF-SASLPPYLASAAITAIDVLE-ENPDLITKLKK 375 (483)
Q Consensus 300 ~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~f-s~~~~p~~~aaa~~al~~l~-~~~~~~~~l~~ 375 (483)
.....++|+++.|++|++++ .||++..+.+..+..+.......+ +++.+...+++..++++.+. +..+.++++.+
T Consensus 205 -~~~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~ 283 (294)
T cd00615 205 -SAAMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIE 283 (294)
T ss_pred -chhhcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 11113569999999999973 246654444322211111111122 33455556666667777765 34567888999
Q ss_pred HHHHHHHhhc
Q 011567 376 NTAILRTGLS 385 (483)
Q Consensus 376 ~~~~l~~~L~ 385 (483)
+.+.+++.|.
T Consensus 284 ~~~~~r~~l~ 293 (294)
T cd00615 284 LALYARQEIN 293 (294)
T ss_pred HHHHHHHHHh
Confidence 9999998875
No 324
>PLN02263 serine decarboxylase
Probab=99.80 E-value=6.6e-17 Score=163.28 Aligned_cols=305 Identities=13% Similarity=0.058 Sum_probs=204.1
Q ss_pred HHhcCCCCCCCCCccc-----ChHHHHHHHHHHHhhhCCCC----EEEecccHHHHHhhhhhhcc--CCcEEEEcCCchh
Q 011567 136 LEKYGVGSCGPRGFYG-----TIDVHLDCEARIAKFLGTPD----SILYSYGLSTMFSAIPCFCK--KGDLIVADEGVHW 204 (483)
Q Consensus 136 l~~~g~g~~~~~~~~g-----~~~~~~~l~~~La~~~g~e~----~i~~~sG~~a~~~ai~~~~~--~gdiI~~~~~~h~ 204 (483)
+..++.+.+|.+...+ +.+...++-+.+++++|.+. .++.++|+++|..++.+... +..++++++..|+
T Consensus 110 ~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~ 189 (470)
T PLN02263 110 LQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHY 189 (470)
T ss_pred HHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccH
Confidence 3344555455444444 44677778888888888642 67889999999998766543 3458999999999
Q ss_pred HHHhHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCc---
Q 011567 205 GIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRF--- 276 (483)
Q Consensus 205 s~~~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~--- 276 (483)
|+.+++.+.|.+++.++.+ |+++|++.+++... ...+|+...-..++|.+.|+++|.++|++||+
T Consensus 190 Sv~KAa~llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~~-------~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~ 262 (470)
T PLN02263 190 SVFKAARMYRMECVKVDTLVSGEIDCADFKAKLLANKD-------KPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQD 262 (470)
T ss_pred HHHHHHHhcCCcceEeccCCCCcCcHHHHHHHHHhCCC-------CcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccC
Confidence 9999999999988877753 78899988865321 24555555555678999999999999999996
Q ss_pred --EEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCC-C-ceeeccHHHHHHHHhc-----CCceeecCC
Q 011567 277 --RVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATE-G-GFCTGSARVVDHQRLS-----SSGYVFSAS 347 (483)
Q Consensus 277 --~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~-G-G~i~~~~~~~~~~~~~-----~~~~~fs~~ 347 (483)
||++|.+++++.+.. -+.. +.++-. ..+|-++.+.+|.++.+ + |.++.++..++.+... ....+...+
T Consensus 263 ~iwlHVDAA~GG~~lPf-~~~~-~~~df~-~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gS 339 (470)
T PLN02263 263 RFYIHCDGALFGLMMPF-VKRA-PKVTFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGS 339 (470)
T ss_pred CeeEEEeccchhhHhhh-cccc-cccCCC-cCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCC
Confidence 999999998766521 1111 112211 23788899999999732 2 5554444443332111 111122223
Q ss_pred CcHHHHHHHHHHHHHHh--cCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHH
Q 011567 348 LPPYLASAAITAIDVLE--ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADW 425 (483)
Q Consensus 348 ~~p~~~aaa~~al~~l~--~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~ 425 (483)
-+...+.....+++.+- ...+.+++..++++++.+.|++. |+....++.++++.+.-+. + .
T Consensus 340 R~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f~~p~-------~---------~ 402 (470)
T PLN02263 340 RNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVFERPK-------D---------E 402 (470)
T ss_pred CCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEEecCc-------h---------H
Confidence 23223344445565543 22467888888999999999987 7777667778877776321 1 1
Q ss_pred HHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 426 ALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 426 ~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
... +|..+... +..+++++...+|++.+|++++.|++..+..
T Consensus 403 ~~~-~gW~L~~~----------~~~~Hivvmphv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 403 EFV-RRWQLACQ----------GNIAHVVVMPSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred Hhh-cceEEccC----------CCcEEEEEcCCCCHHHHHHHHHHHHHHHhhh
Confidence 122 46766542 1238999988889999999999999887643
No 325
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.80 E-value=2.1e-17 Score=165.26 Aligned_cols=230 Identities=19% Similarity=0.232 Sum_probs=168.0
Q ss_pred hHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHh----hhcCCeEEEecCCCHHHH
Q 011567 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL----YLSRSTVVYFKHNDMDSL 228 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~----~~s~~~v~~~~~~d~~~L 228 (483)
.+....||++|+++-|.+.+++|+||.+|+.+++.++.++||.|++....++.+..-+ ...|.++..++..|++++
T Consensus 54 nPt~~~le~~la~Le~g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~l 133 (386)
T PF01053_consen 54 NPTVRALEQRLAALEGGEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEAL 133 (386)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHHH
T ss_pred cccHHHHHHHHHHhhcccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHHH
Confidence 3678899999999999999999999999999999999999999888887776665443 346888888988899999
Q ss_pred HHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcC-cEEEEeCccccccccCCCCccccccCCCCCce
Q 011567 229 RNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYR-FRVFLDESNSFGVLGRSGRGLTEHCGVPVDKI 307 (483)
Q Consensus 229 e~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~-~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~ 307 (483)
++.++. ++++|++|.+.|++..+.||++|+++|+++| +++++|.+.+...+- ..+. ..+
T Consensus 134 ~~~l~~----------~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~-------~pL~---~Ga 193 (386)
T PF01053_consen 134 EAALRP----------NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQ-------NPLE---LGA 193 (386)
T ss_dssp HHHHCT----------TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC--------GGG---GT-
T ss_pred Hhhccc----------cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceeee-------ccCc---CCc
Confidence 988865 3889999999999999999999999999998 999999998643221 1111 224
Q ss_pred eEEEccccccccC----CCceeecc--HHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Q 011567 308 DIVTAAMGHALAT----EGGFCTGS--ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILR 381 (483)
Q Consensus 308 Di~~~s~~K~lg~----~GG~i~~~--~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~ 381 (483)
|+++.|++|.+++ .||.++.+ .++.+.++.. ...++..+.|..+......++.+ +.+.++..+++..+.
T Consensus 194 Divv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~--~~~~G~~~~p~da~ll~rgl~Tl---~~R~~~~~~nA~~lA 268 (386)
T PF01053_consen 194 DIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREF--RRLLGATLSPFDAWLLLRGLRTL---PLRMERQNENAEALA 268 (386)
T ss_dssp SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHH--HHHHT-B--HHHHHHHHHHHTTH---HHHHHHHHHHHHHHH
T ss_pred eEEEeeccccccCCcceeeEEEEECchhhhhhhhcch--hhhcCccchHHHHHHHhcCCCcH---HHHHHHHHHHHHHHH
Confidence 9999999999973 35777754 4666655433 22344556788777776666554 457888899999999
Q ss_pred HhhccCCCce-eecC----------------CCCCEEEEEecC
Q 011567 382 TGLSDIHGLS-IASN----------------PESPIVFLILEK 407 (483)
Q Consensus 382 ~~L~~~~~~~-i~~~----------------~~~~i~~l~l~~ 407 (483)
+.|++.|.+. |.-+ ..+.++.+.++.
T Consensus 269 ~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~ 311 (386)
T PF01053_consen 269 EFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKG 311 (386)
T ss_dssp HHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESS
T ss_pred HHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEecc
Confidence 9998876543 2111 234589999853
No 326
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.80 E-value=2e-17 Score=166.60 Aligned_cols=210 Identities=14% Similarity=0.132 Sum_probs=149.8
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHh----HhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~----g~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+||++++++.|.+.+++++||++|+..++ .+.++||.|++....|.+... .+...|.++..++..|+++++
T Consensus 50 p~~~~Le~~la~l~g~~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~l~ 128 (380)
T PRK06176 50 PTRFALEELIADLEGGVKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQIK 128 (380)
T ss_pred hhHHHHHHHHHHHhCCCCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHHHH
Confidence 457889999999999999999999999998666 466899999888877765432 234457777777777888887
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.++. ++++|++|.+.+++|.+.|+++|.++|++||+++|+|++++.+..++ . .+ ..+|+
T Consensus 129 ~ai~~----------~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~---p----~~---~gaDi 188 (380)
T PRK06176 129 KAIKP----------NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQN---P----LL---LGADI 188 (380)
T ss_pred HhcCc----------CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCC---c----cc---cCCCE
Confidence 76642 37889999999999999999999999999999999999998654321 1 11 23489
Q ss_pred EEccccccccC----CCceeec-cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 310 VTAAMGHALAT----EGGFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 310 ~~~s~~K~lg~----~GG~i~~-~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
+++|++|.+++ .||++++ ++++.+.++.... ..+..++|..+......++.+ +.+.++..++...+.+.|
T Consensus 189 vv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~--~~G~~~~~~~~~l~~~gl~tl---~~R~~~~~~~a~~la~~L 263 (380)
T PRK06176 189 VVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQN--AIGGVLGPQDSWLLQRGIKTL---GLRMEAHQKNALCVAEFL 263 (380)
T ss_pred EEecCceeccCCccceeeEEEecHHHHHHHHHHHHH--HhcCCCCHHHHHHHHhccCcH---HHHHHHHHHHHHHHHHHH
Confidence 99999999974 3687766 4556555443211 112234555544443333322 335666667777777777
Q ss_pred ccCCC
Q 011567 385 SDIHG 389 (483)
Q Consensus 385 ~~~~~ 389 (483)
++.+.
T Consensus 264 ~~~p~ 268 (380)
T PRK06176 264 EKHPK 268 (380)
T ss_pred HhCCC
Confidence 76554
No 327
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.80 E-value=5.3e-17 Score=165.52 Aligned_cols=198 Identities=17% Similarity=0.233 Sum_probs=141.3
Q ss_pred ChHHHHHHHHHHHhcCCCCCC-CCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCch
Q 011567 125 HEKLLESCTSALEKYGVGSCG-PRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVH 203 (483)
Q Consensus 125 ~p~i~~a~~~~l~~~g~g~~~-~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h 203 (483)
++++.+++.+.++.|+..... ..+. ....+..+++.+++++|.+.++++++|++|+..++.+ ..+||.|++.+..|
T Consensus 94 ~~~vieAv~~~~~~y~~l~~~l~~g~--~g~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~~-l~~GdeVIvs~~e~ 170 (454)
T TIGR00474 94 AEEAIEAVTDAARGYSNLEYDLETGK--RGSRYSHVEGLLCELTGAEDALVVNNNAAAVLLALNT-LAKGKEVIVSRGEL 170 (454)
T ss_pred CHHHHHHHHHHHhcccchhccccccc--cchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHH-hCCcCEEEECCChh
Confidence 689999999999987521100 0001 1245789999999999999999999999999888865 46788888877654
Q ss_pred h------HHHhHhhhcCCeEEEecCC---CHHHHHHHHHHhhhhhhhccCccEEEEEecccCC--CC--CccChHHHHHH
Q 011567 204 W------GIQNGLYLSRSTVVYFKHN---DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQN--SG--QIAPLDELIRL 270 (483)
Q Consensus 204 ~------s~~~g~~~s~~~v~~~~~~---d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~--~G--~i~~L~~l~~l 270 (483)
. .+...+...|.+++.++++ |++++++.+. + ++++|++++..+. .| .+.|+++|+++
T Consensus 171 v~~ggs~~i~~~~~~~G~~~~~v~~~~~~~l~dle~aI~---~-------~T~lv~~~h~sN~~~~G~~~~~dl~~I~~l 240 (454)
T TIGR00474 171 VEIGGSFRIPDVMEQSGAKLVEVGTTNRTHLKDYEDAIT---E-------NTALLLKVHTSNYRIVGFTEEVSIAELVAL 240 (454)
T ss_pred hhhcchhhHHHHHHHcCCEEEEeCCCCCCCHHHHHHhcC---c-------CCEEEEEEccCcccccCCCCCCCHHHHHHH
Confidence 2 3445677789999999874 4556665553 2 2677777766543 46 58899999999
Q ss_pred HHHcCcEEEEeCccccccccCCCC-ccccc---cCCCCCceeEEEcccccccc-CCCceeeccHHHHHHHHh
Q 011567 271 KEKYRFRVFLDESNSFGVLGRSGR-GLTEH---CGVPVDKIDIVTAAMGHALA-TEGGFCTGSARVVDHQRL 337 (483)
Q Consensus 271 ~~k~~~~li~DEa~s~g~lg~~G~-g~~~~---~~v~~~~~Di~~~s~~K~lg-~~GG~i~~~~~~~~~~~~ 337 (483)
|++||+++++|.+ .|.++..+. |+... ......++|++++|.+|++| +.||+++++++.++.++.
T Consensus 241 a~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~~~i~~l~~ 310 (454)
T TIGR00474 241 GREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKKELIERLKK 310 (454)
T ss_pred HHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECHHHHHhhhh
Confidence 9999999999964 555654332 22110 11112456999999999996 558999999988876553
No 328
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.79 E-value=3.4e-17 Score=159.75 Aligned_cols=338 Identities=18% Similarity=0.242 Sum_probs=206.7
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccCh--HHHHHHHHHHHhhhCCC--CEEEecccHHHHHhh
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTI--DVHLDCEARIAKFLGTP--DSILYSYGLSTMFSA 185 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~--~~~~~l~~~La~~~g~e--~~i~~~sG~~a~~~a 185 (483)
-|+|..+. |- -+|+|.+|..+.+..| .+..-++ .||.. +..++.++.+|++.|.+ +.+|++++|+++..+
T Consensus 45 vyld~~at---~p-~~~~Vldam~~~~~~~-~~nPh~~-~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlv 118 (428)
T KOG1549|consen 45 VYLDNQAT---GP-MDPRVLDAMLPYLLEY-LGNPHSR-SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLV 118 (428)
T ss_pred EEEecCcC---CC-CCHHHHHHHHHHHHHh-hcCCCcc-ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHH
Confidence 47777765 33 5789999999988874 2222333 34443 44788899999999964 555557778999988
Q ss_pred hhhhcc-CCc----EEEEcCCchhHHHhHhh---hcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEe
Q 011567 186 IPCFCK-KGD----LIVADEGVHWGIQNGLY---LSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVE 252 (483)
Q Consensus 186 i~~~~~-~gd----iI~~~~~~h~s~~~g~~---~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e 252 (483)
++.+.. .+| .|++-...|.++..+++ -.|..+..++.+ |.+.+++.++. ++++|.+.
T Consensus 119 l~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~----------~T~lv~I~ 188 (428)
T KOG1549|consen 119 LKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIRS----------KTRLVSIM 188 (428)
T ss_pred HHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcCC----------CceEEEEE
Confidence 876542 233 89998999999887665 346666666654 34444444433 48999999
Q ss_pred cccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccHHH
Q 011567 253 AVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARV 331 (483)
Q Consensus 253 ~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~~~ 331 (483)
.+.++.|.+.|++||.++|+++|+.+++|.+|+.|... .++..-++|+++.|.+|++|+.| |++..++ .
T Consensus 189 ~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~---------vDV~eln~D~~s~s~HK~ygp~~iGaLYvr~-~ 258 (428)
T KOG1549|consen 189 HVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIP---------VDVQELNADFLSISAHKIYGPPGIGALYVRR-K 258 (428)
T ss_pred ecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCcc---------ccHHHcCchheeeecccccCCCcceEEEEcc-C
Confidence 99999999999999999999999999999999976542 34444566999999999999876 7776654 1
Q ss_pred HHHHH----hcCCce---eecCCCcHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHhhcc-CCCceeecCCCC---C
Q 011567 332 VDHQR----LSSSGY---VFSASLPPYLASAAITAIDVLEEN-PDLITKLKKNTAILRTGLSD-IHGLSIASNPES---P 399 (483)
Q Consensus 332 ~~~~~----~~~~~~---~fs~~~~p~~~aaa~~al~~l~~~-~~~~~~l~~~~~~l~~~L~~-~~~~~i~~~~~~---~ 399 (483)
..+++ ..+.+- ..+++.++..+...-++.++...+ .-......+....+..++.. .++..+.+.+.+ .
T Consensus 259 ~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~~~~~ 338 (428)
T KOG1549|consen 259 RPRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKSRYPG 338 (428)
T ss_pred CCcccccCcccCCccccccccCCcCchhhhhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHhhhCchhhccCCccccccc
Confidence 11111 111111 123334444455555666666533 22233333445555554432 333333332221 1
Q ss_pred EEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecc-c-------ccccCCCCCceEEEccCCCCHHHHHHHHHHH
Q 011567 400 IVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKR-S-------MLDKCRLPVGIRLFVSAAHSEADLVKACESL 471 (483)
Q Consensus 400 i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~-~-------~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l 471 (483)
...+.+.... ....+.+.....+.. |..+..... | ..+.+....+|||++....|++|++++++.+
T Consensus 339 ~~~~~~~~~~-----g~~~~~~~~~~~l~s-~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i 412 (428)
T KOG1549|consen 339 LVSLSFPYVE-----GESLLMDLKDVALSS-GSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAI 412 (428)
T ss_pred ceeeeccccc-----Ccchhhhhhhhhhcc-cchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHHHH
Confidence 2223332111 111122222222222 333322210 0 0111112356999999999999999999999
Q ss_pred HHHHHHHH
Q 011567 472 KRISAVVL 479 (483)
Q Consensus 472 ~~~~~~~~ 479 (483)
++.+....
T Consensus 413 ~~~v~~~~ 420 (428)
T KOG1549|consen 413 KKLVSLLR 420 (428)
T ss_pred HHHHHhcc
Confidence 99887653
No 329
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.78 E-value=3.7e-16 Score=150.54 Aligned_cols=308 Identities=13% Similarity=0.143 Sum_probs=207.2
Q ss_pred CEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC----CHHHHHHHHHHhhhhhhhccCcc
Q 011567 171 DSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----DMDSLRNTLERVTADNKRAKKLR 246 (483)
Q Consensus 171 ~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~----d~~~Le~~l~~~~~~~~~~~~~~ 246 (483)
+.++.++.+.+...+++.++.+||.|+++...+.+....++..|.+++.++.+ +++.|++++..-.....+.+++.
T Consensus 126 diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~~p~ 205 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSYKKPKPH 205 (472)
T ss_pred eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEEeccccCCCCCHHHHHHHHhcCCcccccCCCCe
Confidence 34444555689999999999999999999999999999999999999998865 78999999987665544445555
Q ss_pred EEEEEecccCCCCCccCh---HHHHHHHHHcCcEEEEeCccccccccCC--------C--C--c-----cccccCCCCCc
Q 011567 247 RYIVVEAVYQNSGQIAPL---DELIRLKEKYRFRVFLDESNSFGVLGRS--------G--R--G-----LTEHCGVPVDK 306 (483)
Q Consensus 247 ~~iv~e~v~~~~G~i~~L---~~l~~l~~k~~~~li~DEa~s~g~lg~~--------G--~--g-----~~~~~~v~~~~ 306 (483)
.+..+..-+|++|...++ ++|.+||+||++++|.||.|-+--++.. . . - .....+++-+.
T Consensus 206 vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdG 285 (472)
T KOG0634|consen 206 VLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDG 285 (472)
T ss_pred EEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccc
Confidence 666666677889998885 7899999999999999999987655520 0 0 0 11223445566
Q ss_pred eeEEEccccccccC--CCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcC------cHHHHHHHHHHH
Q 011567 307 IDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEEN------PDLITKLKKNTA 378 (483)
Q Consensus 307 ~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~------~~~~~~l~~~~~ 378 (483)
..|-..||||-+++ .-||+.+++..++++-..+...+-+. +.+......+.++..-++ .+++.....+..
T Consensus 286 rVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~ae~~t~~p--Sg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn 363 (472)
T KOG0634|consen 286 RVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLAEVATSGP--SGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRN 363 (472)
T ss_pred cEEeccchhhhhcCcceeEEeecCHHHHHHHhhhcceeecCc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67888999999974 34999999988777644332222221 222222222333332221 234444445555
Q ss_pred HHHHhhcc-CC-C-ceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCC-CC-ceEE
Q 011567 379 ILRTGLSD-IH-G-LSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRL-PV-GIRL 453 (483)
Q Consensus 379 ~l~~~L~~-~~-~-~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~-~~-~lRi 453 (483)
.+.+.|.+ ++ + +.+.++..+.++++.+.-........-...+++...++.++||.+.++....+..... .. -+|+
T Consensus 364 ~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRl 443 (472)
T KOG0634|consen 364 ALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRL 443 (472)
T ss_pred HHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEE
Confidence 55556644 23 2 5666677788889988521111111222345566667778899999887655542211 11 3899
Q ss_pred EccCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011567 454 FVSAAHSEADLVKACESLKRISAVVLRD 481 (483)
Q Consensus 454 ~~~~~~t~edi~~~~~~l~~~~~~~~~~ 481 (483)
+++. ...|+++++++++..++++.+..
T Consensus 444 s~a~-a~~e~l~~g~~rf~~~ike~f~~ 470 (472)
T KOG0634|consen 444 SIAF-AEPEKLDEGIERFGSVIKEHFIT 470 (472)
T ss_pred Eeec-CCHHHHHHHHHHHHHHHHHHhhc
Confidence 8866 57789999999999999987653
No 330
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.78 E-value=6.3e-17 Score=163.41 Aligned_cols=288 Identities=14% Similarity=0.063 Sum_probs=192.6
Q ss_pred hHHHHHHHHHHHhhhCCC---CEEEec-ccHHHHHhhhhhhccC-CcEEEEcCCchhHHHhH-h-hhcCC-eEEEecCCC
Q 011567 153 IDVHLDCEARIAKFLGTP---DSILYS-YGLSTMFSAIPCFCKK-GDLIVADEGVHWGIQNG-L-YLSRS-TVVYFKHND 224 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e---~~i~~~-sG~~a~~~ai~~~~~~-gdiI~~~~~~h~s~~~g-~-~~s~~-~v~~~~~~d 224 (483)
.+...+.++.++++++.+ ++++++ ||+.++..++..+.++ ++.++. ...|++-+.. + +..|. ++..++..+
T Consensus 47 ~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~ 125 (378)
T PRK03080 47 KALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEADY 125 (378)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCC
Confidence 357789999999999963 455564 8999999998887764 556555 4677664432 2 33466 666665431
Q ss_pred --HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCC
Q 011567 225 --MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGV 302 (483)
Q Consensus 225 --~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v 302 (483)
.-++++ ++. ++.|.+.++.+.+|.+.|+++|.+ ++||+++++|.++++|... +++
T Consensus 126 g~~~d~~~-i~~-----------~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~p---------idv 182 (378)
T PRK03080 126 GSLPDLSA-VDF-----------DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALP---------LDW 182 (378)
T ss_pred CCCCCHhh-cCC-----------CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCC---------CCH
Confidence 112322 111 235778888888999999999999 7899999999999987542 333
Q ss_pred CCCceeEEEcccccccc-CCC-ceeeccHHHHHHHHhcCCc-----------------eeec---CCCcHH-HHHHHHHH
Q 011567 303 PVDKIDIVTAAMGHALA-TEG-GFCTGSARVVDHQRLSSSG-----------------YVFS---ASLPPY-LASAAITA 359 (483)
Q Consensus 303 ~~~~~Di~~~s~~K~lg-~~G-G~i~~~~~~~~~~~~~~~~-----------------~~fs---~~~~p~-~~aaa~~a 359 (483)
+++|++++|.+|+|+ +.| |++..+++..+.+.....+ ..|. ...++. ...+..++
T Consensus 183 --~~iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~a 260 (378)
T PRK03080 183 --SKLDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQ 260 (378)
T ss_pred --HHCcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHH
Confidence 457999999999996 466 8888888887765432110 0111 112333 33445678
Q ss_pred HHHHhcC---cHHHHHHHHHHHHHHHhhccCCCceeecC---CCC-CEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCE
Q 011567 360 IDVLEEN---PDLITKLKKNTAILRTGLSDIHGLSIASN---PES-PIVFLILEKSTGSMKNDLQLLEDIADWALKEDGV 432 (483)
Q Consensus 360 l~~l~~~---~~~~~~l~~~~~~l~~~L~~~~~~~i~~~---~~~-~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv 432 (483)
++++.+. +.+.++.+++.+++++.|+++.++.+... ..+ .++.+.+++. +.....++...++++ |+
T Consensus 261 l~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~------~~~~~~~~~~~l~~~-~i 333 (378)
T PRK03080 261 LDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDA------QAAVDAAAVAKLLRE-NG 333 (378)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCc------hHHHHHHHHHHHHHc-CC
Confidence 8888653 46778889999999999998865655421 223 4677766431 001112345555554 77
Q ss_pred EEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 433 FVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 433 ~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
.+....+.. .+..+|++++..+|++||++++++|++++++.
T Consensus 334 ~v~~g~~~~-----~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 374 (378)
T PRK03080 334 AVDIEPYRD-----APNGLRIWCGPTVEPADVEALTPWLDWAFERL 374 (378)
T ss_pred eeccccccC-----CCCcEEEecCCCCCHHHHHHHHHHHHHHHHHH
Confidence 776543321 12459999999999999999999999987654
No 331
>PRK04311 selenocysteine synthase; Provisional
Probab=99.78 E-value=4.1e-16 Score=159.50 Aligned_cols=317 Identities=15% Similarity=0.147 Sum_probs=194.3
Q ss_pred CChHHHHHHHHHHHhcCCCCC-CCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCc
Q 011567 124 GHEKLLESCTSALEKYGVGSC-GPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGV 202 (483)
Q Consensus 124 ~~p~i~~a~~~~l~~~g~g~~-~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~ 202 (483)
-++++.+++.+.+..|..... ...+.. .+.+..+++.+++++|.++++++++|++|+..++.++ ++||.|++.+..
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~--g~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~l-~~GdeVIvs~~e 174 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKR--GSRDRALAALLCALTGAEDALVVNNNAAAVLLALNAL-AAGKEVIVSRGE 174 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhccc--chHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHh-CCCCEEEEcchh
Confidence 357889999998887642110 000011 2446789999999999999999999999999888665 678878777654
Q ss_pred hh------HHHhHhhhcCCeEEEecCC---CHHHHHHHHHHhhhhhhhccCccEEEEEecccCC--CC--CccChHHHHH
Q 011567 203 HW------GIQNGLYLSRSTVVYFKHN---DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQN--SG--QIAPLDELIR 269 (483)
Q Consensus 203 h~------s~~~g~~~s~~~v~~~~~~---d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~--~G--~i~~L~~l~~ 269 (483)
|. .+...+...|.+++.++++ +++++++.+.+ ++++|++++..+. .| ...|+++|++
T Consensus 175 ~~~~ggs~~i~~~~~~~G~~l~~v~~~~~t~~~dle~aI~~----------~TklV~~vh~sN~~i~G~~~~~dl~eI~~ 244 (464)
T PRK04311 175 LVEIGGAFRIPDVMRQAGARLVEVGTTNRTHLRDYEQAINE----------NTALLLKVHTSNYRIEGFTKEVSLAELAA 244 (464)
T ss_pred hhhcCcchhhHHHHHHCCcEEEEECCCCCCCHHHHHHhcCc----------cCeEEEEEcCCCccccccCCcCCHHHHHH
Confidence 43 2344567789999888864 45566665532 2677777776653 44 6789999999
Q ss_pred HHHHcCcEEEEeCccccccccCCC-CccccccCC---CCCceeEEEcccccccc-CCCceeeccHHHHHHHHhcCCceee
Q 011567 270 LKEKYRFRVFLDESNSFGVLGRSG-RGLTEHCGV---PVDKIDIVTAAMGHALA-TEGGFCTGSARVVDHQRLSSSGYVF 344 (483)
Q Consensus 270 l~~k~~~~li~DEa~s~g~lg~~G-~g~~~~~~v---~~~~~Di~~~s~~K~lg-~~GG~i~~~~~~~~~~~~~~~~~~f 344 (483)
+|++||+++++|.. .|.++..+ .|+.....+ -..++|++++|.+|.+| +.+|++++++++++.++.+...-..
T Consensus 245 lak~~gi~vivD~g--sG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~~li~~l~~~~~~r~l 322 (464)
T PRK04311 245 LGKEHGLPVVYDLG--SGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKKELIARLKKHPLKRAL 322 (464)
T ss_pred HHHHcCCeEEEECC--CcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcHHHHHHHhhchhHHHH
Confidence 99999999999995 34444321 111111111 01356999999999996 5579999999998876633211111
Q ss_pred cCCCcHHHHHHHHHHHHHHhc-------------CcHHHHHHHHHHHHHHHhhccCC--Cc--eeecC-----------C
Q 011567 345 SASLPPYLASAAITAIDVLEE-------------NPDLITKLKKNTAILRTGLSDIH--GL--SIASN-----------P 396 (483)
Q Consensus 345 s~~~~p~~~aaa~~al~~l~~-------------~~~~~~~l~~~~~~l~~~L~~~~--~~--~i~~~-----------~ 396 (483)
...-...++..+++..... .....++++++++.+.+.|+... ++ .+... .
T Consensus 323 --r~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~ 400 (464)
T PRK04311 323 --RVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVD 400 (464)
T ss_pred --hcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCC
Confidence 1122233333334432211 01124677778888888887653 22 33311 1
Q ss_pred CCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhC--CEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 397 ESPIVFLILEKSTGSMKNDLQLLEDIADWALKED--GVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 397 ~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~--Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
.-|-+.+.+..... ...++.+ .|++. .|+.+... +.+.+-+- .+.++|++.+++.++++
T Consensus 401 ~~~~~~v~~~~~~~-------~~~~l~~-~lr~~~~~i~~r~~~----------~~~~ld~r-~~~~~~~~~~~~~~~~~ 461 (464)
T PRK04311 401 RLPSAAVTLTPKDR-------SLEALAA-RLRLLPPPVIGRIED----------GRLLLDLR-TLEEEDEERLAAALLEA 461 (464)
T ss_pred CCCeEEEEEeCCCC-------CHHHHHH-HHhcCCCCEEEEEEC----------CEEEEEeC-cCCHHHHHHHHHHHHHH
Confidence 12445555543211 1234444 35553 35554221 22455443 46889999999999887
Q ss_pred HH
Q 011567 475 SA 476 (483)
Q Consensus 475 ~~ 476 (483)
+.
T Consensus 462 ~~ 463 (464)
T PRK04311 462 LN 463 (464)
T ss_pred hh
Confidence 53
No 332
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.78 E-value=1.5e-16 Score=158.76 Aligned_cols=311 Identities=16% Similarity=0.146 Sum_probs=198.4
Q ss_pred hHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhH-hhhcCCeEEEecC---------
Q 011567 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG-LYLSRSTVVYFKH--------- 222 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g-~~~s~~~v~~~~~--------- 222 (483)
.+-..+||+.+++++|.+.++.++||+.|...+.....++||.| ...+|+....+ +...|...+.+..
T Consensus 70 ~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~ 147 (450)
T TIGR02618 70 SRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLN 147 (450)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhCCeEEEeeecccccccccC
Confidence 34467999999999999999999999999766677788999977 55777666665 6777765444411
Q ss_pred -----C-CHHHHHHHHHHhhhhhhhccCccEEEEEecccC-CCCCccC---hHHHHHHHHHcCcEEEEeCcccccc--c-
Q 011567 223 -----N-DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQ-NSGQIAP---LDELIRLKEKYRFRVFLDESNSFGV--L- 289 (483)
Q Consensus 223 -----~-d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~-~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~--l- 289 (483)
| |++.|++.+++... ..+++|.++-..+ .+|...| ++++.++|++||+.+|.|.++.+|- +
T Consensus 148 ~p~~GniD~~~Le~aI~~~~~------~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I 221 (450)
T TIGR02618 148 IPFKGNVDLKKLQKLIDEVGA------DKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFI 221 (450)
T ss_pred CCCCCCcCHHHHHHHhccccC------cccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhh
Confidence 1 78889988864321 1234544444444 4577754 7999999999999999999998742 1
Q ss_pred -----cCCCCcc----ccccCCCCCceeEEEcccccccc-CCCceee-ccHHHHHHHHhcCCce---eecCCCcHHHHHH
Q 011567 290 -----GRSGRGL----TEHCGVPVDKIDIVTAAMGHALA-TEGGFCT-GSARVVDHQRLSSSGY---VFSASLPPYLASA 355 (483)
Q Consensus 290 -----g~~G~g~----~~~~~v~~~~~Di~~~s~~K~lg-~~GG~i~-~~~~~~~~~~~~~~~~---~fs~~~~p~~~aa 355 (483)
|..++.+ .+.+ ...|.++.|..|..+ ..||+++ +++++++..+.....+ .-.+.+..-.+.+
T Consensus 222 ~~re~g~~~~~i~ei~~e~~----~~aD~~~~S~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~a 297 (450)
T TIGR02618 222 KEREQGYEDKSIAEILKEMM----SYADGCTMSGKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEA 297 (450)
T ss_pred hcccccccCCCHHHHHHHHh----ccCcEEEEeeccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHH
Confidence 1222222 1111 234888889999887 5599987 7888888776542222 1111111111112
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEE
Q 011567 356 AITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVV 435 (483)
Q Consensus 356 a~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~ 435 (483)
..-+|+...+ ....++-..+.++|.+.|.+. |+++..+.+++.+++....-......+.--.+.++.++..+.||-..
T Consensus 298 la~gL~e~~~-~~y~~~r~~~a~~La~~L~~~-Gvpv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~ 375 (450)
T TIGR02618 298 MAIGIREAVD-YEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSM 375 (450)
T ss_pred HHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHC-CCcccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEE
Confidence 1223332222 235555666789999999987 99997777889998876432111112223355666666667777543
Q ss_pred eec------ccccccCCCC--CceEEEccC-CCCHHHHHHHHHHHHHHHHH
Q 011567 436 TSK------RSMLDKCRLP--VGIRLFVSA-AHSEADLVKACESLKRISAV 477 (483)
Q Consensus 436 ~~~------~~~~~~~~~~--~~lRi~~~~-~~t~edi~~~~~~l~~~~~~ 477 (483)
-.. .|...+...+ .-+|++++- ..|.+++|.+++++..+.++
T Consensus 376 e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 376 ERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred eecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 211 1111111112 239997765 56999999999999887654
No 333
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.77 E-value=2e-16 Score=151.08 Aligned_cols=332 Identities=16% Similarity=0.216 Sum_probs=220.2
Q ss_pred CCeeEEEeecC--CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHh
Q 011567 107 SGKEVVNFASA--NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFS 184 (483)
Q Consensus 107 ~G~~~id~~s~--~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ 184 (483)
||...++..+. +|.|+ |...+|+.+.+.++ |+.+.. +..++.++.++++.|++.
T Consensus 106 eg~~~f~~la~fqdy~Gl---~~frqa~A~Fm~~~----r~~~v~-----------------fdP~~~Vv~~G~T~ane~ 161 (471)
T KOG0256|consen 106 EGQSSFDELAMFQDYHGL---PSFRQAVAEFMERA----RGNRVK-----------------FDPERVVVTNGATSANET 161 (471)
T ss_pred ccccchhhHhhcccccCc---hHHHHHHHHHHHHH----hCCCCc-----------------cCccceEEecccchhhHH
Confidence 44444444332 67666 67888888877775 121111 134567888999999999
Q ss_pred hhhhhccCCcEEEEcCCchhHHHhHhh-hcCCeEEEecC---C----CHHHHHHHHHHhhhhhhhccCccEEEEEecccC
Q 011567 185 AIPCFCKKGDLIVADEGVHWGIQNGLY-LSRSTVVYFKH---N----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQ 256 (483)
Q Consensus 185 ai~~~~~~gdiI~~~~~~h~s~~~g~~-~s~~~v~~~~~---~----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~ 256 (483)
.+.+++.+||..+++.+|+++...-++ ..|.+++++.. | +.+.||..+++..+. ..+++-+++..+.|
T Consensus 162 l~fcLadpgdafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~----~~kVkGvlitNPsN 237 (471)
T KOG0256|consen 162 LMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKL----GLKVKGVLITNPSN 237 (471)
T ss_pred HHHHhcCCCceeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHh----CCceeEEEEeCCCC
Confidence 999999999999999999988654444 35666665532 2 588999888776543 23466677777788
Q ss_pred CCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCC-cccccc---CCCCCceeEEEccccccccCCC---ceee
Q 011567 257 NSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGR-GLTEHC---GVPVDKIDIVTAAMGHALATEG---GFCT 326 (483)
Q Consensus 257 ~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~-g~~~~~---~v~~~~~Di~~~s~~K~lg~~G---G~i~ 326 (483)
+-|++.+ |..+...+.++++.+|+||+|+..+++..+. .+.+.. ...++.+-| +-|+||-||.+| |.+.
T Consensus 238 PLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHi-vyslSKD~GlpGfRvGviY 316 (471)
T KOG0256|consen 238 PLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHI-VYSLSKDFGLPGFRVGVIY 316 (471)
T ss_pred CCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEE-EEEeccccCCCceEEEEEE
Confidence 8898887 8888888999999999999999988887431 112221 124555555 469999999888 7775
Q ss_pred c-cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEE
Q 011567 327 G-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLI 404 (483)
Q Consensus 327 ~-~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~ 404 (483)
. ++.++...+..+ .|.--.+.....++..+.--++.++ .++..++++...+++-++|+++ |++......+.++++.
T Consensus 317 S~ne~VvsaA~kms-sf~~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~s~AGlF~wvD 394 (471)
T KOG0256|consen 317 SNNEDVVSAATKMS-SFGLVSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCLKSNAGLFCWVD 394 (471)
T ss_pred ecChHHHHHHHHHh-hccCCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCceeecCCeeEEEEE
Confidence 5 455666554332 1111111223333333332222222 1456788888889999999997 9998877677788887
Q ss_pred ecCCC--CCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 405 LEKST--GSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 405 l~~~~--~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
+..-- .+++.+. ++.++.+.+-++.++|+... +|.-|+.+|+|+. ...++.++-+++.|+..+.+
T Consensus 395 lr~lL~s~tfe~El----~Lw~~i~~~vklnlSpG~s~---~C~EpGWFRvcFA-n~~~~t~~~am~Ri~~~~~~ 461 (471)
T KOG0256|consen 395 LRKLLTSLTFEGEL----ELWERILDNVKLNLSPGSSC---HCHEPGWFRVCFA-NMSEETLEVAMRRLKQFLDS 461 (471)
T ss_pred hHHhcCcCChHHHH----HHHHHHHHhhccccCCCCcc---eecCCCeEEEEec-cCCHHHHHHHHHHHHHHHHh
Confidence 65322 1222222 45556666658999887543 3444667999985 46677777799999988764
No 334
>PRK15029 arginine decarboxylase; Provisional
Probab=99.77 E-value=1.9e-16 Score=168.58 Aligned_cols=230 Identities=15% Similarity=0.176 Sum_probs=162.0
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccH-HHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC---------
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGL-STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN--------- 223 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~-~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~--------- 223 (483)
.+..+.++..|+.+|.+++.+..+|+ .+|.+++.+.+++||.|++++.+|-|+..|+.++|+..+++...
T Consensus 205 G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~~ 284 (755)
T PRK15029 205 GAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIGP 284 (755)
T ss_pred cHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCccC
Confidence 46788999999999999999886665 67888999999999999999999999999999999988876421
Q ss_pred -C-----HHHHHHHHHHhhhhhh-hccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccc-cccCCCCc
Q 011567 224 -D-----MDSLRNTLERVTADNK-RAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFG-VLGRSGRG 295 (483)
Q Consensus 224 -d-----~~~Le~~l~~~~~~~~-~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g-~lg~~G~g 295 (483)
+ ++.+++.+++....-+ ..++..++|++.|.|. |.+.++++|+++|+++++.|++||+|+.- .+.+ .
T Consensus 285 i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~--Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~---~ 359 (755)
T PRK15029 285 IYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYD--GVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNP---I 359 (755)
T ss_pred CCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCc--ceeeCHHHHHHHHHhcCCeEEEECccccccccCc---c
Confidence 2 7889888877543210 1223347788888775 99999999999999999999999999642 1221 1
Q ss_pred cccccCC-----CCCcee-EEEcccccccc--CCCceee--ccHHHHH--HHHhcCCceeecCCCcHHHHHHHHHHHHHH
Q 011567 296 LTEHCGV-----PVDKID-IVTAAMGHALA--TEGGFCT--GSARVVD--HQRLSSSGYVFSASLPPYLASAAITAIDVL 363 (483)
Q Consensus 296 ~~~~~~v-----~~~~~D-i~~~s~~K~lg--~~GG~i~--~~~~~~~--~~~~~~~~~~fs~~~~p~~~aaa~~al~~l 363 (483)
+..+..+ .....| +++.|.+|.++ +.+.++- +++..++ .++.. .....|+|.+-..+|..-.+.+++
T Consensus 360 ~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~-l~~~qSTSPSY~LmASLD~ar~~m 438 (755)
T PRK15029 360 YADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQA-YMMHATTSPLYAICASNDVAVSMM 438 (755)
T ss_pred ccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHH-HHHHcCCCcHHHHHHHHHHHHHHH
Confidence 2221222 113457 89999999997 3345542 2210122 22111 122234455555566666677777
Q ss_pred hc--CcHHHHHHHHHHHHHHHhhccCCC
Q 011567 364 EE--NPDLITKLKKNTAILRTGLSDIHG 389 (483)
Q Consensus 364 ~~--~~~~~~~l~~~~~~l~~~L~~~~~ 389 (483)
+. ..++.++..+....+++.+.++++
T Consensus 439 ~~~~G~~l~~~~i~~~~~~r~~l~~~~~ 466 (755)
T PRK15029 439 DGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhccc
Confidence 64 456788888888889988876644
No 335
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.76 E-value=1e-16 Score=160.63 Aligned_cols=306 Identities=13% Similarity=0.113 Sum_probs=196.4
Q ss_pred CChHHHHHHHHHHHhcCCCCCCCCCcccCh-------HHHHHHHHHHHhhhCC--CC-EEEe-cccHHHHHhhhhhhcc-
Q 011567 124 GHEKLLESCTSALEKYGVGSCGPRGFYGTI-------DVHLDCEARIAKFLGT--PD-SILY-SYGLSTMFSAIPCFCK- 191 (483)
Q Consensus 124 ~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~-------~~~~~l~~~La~~~g~--e~-~i~~-~sG~~a~~~ai~~~~~- 191 (483)
.++.+.+|+.+.+..|+ +.. |+.+... +...+.++.++++++. ++ ++++ +||++++..++..+.+
T Consensus 10 ~p~~V~~a~~~~~~~~~-~~~--rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~ 86 (355)
T cd00611 10 LPEEVLEQAQKELLDFN-GLG--MSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGD 86 (355)
T ss_pred CCHHHHHHHHHHHhhcc-cCC--ccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCC
Confidence 46899999999887765 222 2222222 5678899999999995 23 4555 4489999999988876
Q ss_pred --CCcEEEEcCCchhHHHhHhhhcCCeEEEecCC------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC
Q 011567 192 --KGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP 263 (483)
Q Consensus 192 --~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~ 263 (483)
++|.|+.....|.+ .+-++..|.++..++.. +..++++. ...+ .+++|.+.+..+.+|.+.+
T Consensus 87 ~~~~~~i~~g~~~~~~-~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~--~~~~-------~~~lV~~~h~~t~tG~~~~ 156 (355)
T cd00611 87 KGTADYVVTGAWSAKA-AKEAKRYGGVVVIVAAKEEGKYTKIPDVETW--DLAP-------DAAYVHYCSNETIHGVEFD 156 (355)
T ss_pred CCeEEEEECCHHHHHH-HHHHHhcCCCcEEEecccccCCCCCCCHhhc--CCCC-------CCCEEEEeCCcccccEEcc
Confidence 66777664333322 22334456666666543 21222211 1112 3678888888888898733
Q ss_pred hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccHHHHHHHHhcCCce
Q 011567 264 LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSSGY 342 (483)
Q Consensus 264 L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~~~~~~~~~~~~~~ 342 (483)
++++.||+++++|.++++|.+. ++.++.|+.+.|.+|.+|+.| |+++.+++..+.+......+
T Consensus 157 -----~i~~~~g~~~~VDa~qs~g~~~-----------idv~~~~~~~ss~~K~lGP~G~g~l~~~~~~~~~~~~~~~~~ 220 (355)
T cd00611 157 -----EVPDTGGVPLVADMSSNILSRP-----------IDVSKFGVIYAGAQKNLGPAGVTVVIVRKDLLGKARKITPSM 220 (355)
T ss_pred -----eecccCCCeEEEEccccccCCC-----------CCHHHhCEEEeecccccCCCceEEEEECHHHHhhcccCCCCc
Confidence 4566699999999999987542 233444566666899999887 88888888776543221110
Q ss_pred e----------ecCCCcHHHHHHHHHHHHHHhcC---cHHHHHHHHHHHHHHHhhccCCCce-eec--CCCC-CEEEEEe
Q 011567 343 V----------FSASLPPYLASAAITAIDVLEEN---PDLITKLKKNTAILRTGLSDIHGLS-IAS--NPES-PIVFLIL 405 (483)
Q Consensus 343 ~----------fs~~~~p~~~aaa~~al~~l~~~---~~~~~~l~~~~~~l~~~L~~~~~~~-i~~--~~~~-~i~~l~l 405 (483)
. ...+.|-....+..++++++.+. +.+.++.+++.+++++.|++++|+. ... ...+ .++.+.+
T Consensus 221 ~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~ 300 (355)
T cd00611 221 LNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRL 300 (355)
T ss_pred ccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEc
Confidence 0 01233444566666889988643 4678888999999999999987752 211 1245 3477776
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 406 EKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 406 ~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
.+. ....++... +.+.|+.+..... ..+.+|+++...+|++|||+++++|+++
T Consensus 301 ~~~--------~l~~~~~~~-~~r~G~~~~~~~~-------~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 301 GKE--------ELEKEFLKE-AEAAGMIGLKGHR-------SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred CCh--------hhhHHHHHH-HHHCCCcccCCCc-------ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 431 111233333 3456887433321 1245999999999999999999999885
No 336
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.76 E-value=3.7e-16 Score=154.35 Aligned_cols=232 Identities=17% Similarity=0.190 Sum_probs=171.5
Q ss_pred hHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhH----hhhcCCeEEEecCCCHHHH
Q 011567 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG----LYLSRSTVVYFKHNDMDSL 228 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g----~~~s~~~v~~~~~~d~~~L 228 (483)
.+....||+.++++-|.+.++.|+||.+|+.+++.++.++||.|+.....++++..- ++..|.++..++..|.+.+
T Consensus 62 nPT~~~lE~~~a~LEg~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~~ 141 (396)
T COG0626 62 NPTRDALEEALAELEGGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEAL 141 (396)
T ss_pred CccHHHHHHHHHHhhCCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHHH
Confidence 356789999999999999999999999999999999999999999888777665432 3445677777766665555
Q ss_pred HHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCcee
Q 011567 229 RNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKID 308 (483)
Q Consensus 229 e~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~D 308 (483)
++.+.+ + ++++|++|++.|++-.+.|+++|+++++++|+++++|++++.+++-+ . +. ..+|
T Consensus 142 ~~~~~~--~-------~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~---P----L~---~GaD 202 (396)
T COG0626 142 EAAIKE--P-------NTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQR---P----LE---LGAD 202 (396)
T ss_pred HHHhcc--c-------CceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccC---h----hh---cCCC
Confidence 554432 1 38999999999999999999999999999999999999987654321 1 11 3359
Q ss_pred EEEccccccccC----CCceeeccHH-HHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHh
Q 011567 309 IVTAAMGHALAT----EGGFCTGSAR-VVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTG 383 (483)
Q Consensus 309 i~~~s~~K~lg~----~GG~i~~~~~-~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~ 383 (483)
|++.|.+|-+++ .||.++++.+ +.+.+...... ..++.+.|..+-..+..++-+. -+.++..+|+..+.+.
T Consensus 203 IVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~-~~G~~l~p~dA~l~lRGlkTL~---~Rm~~~~~nA~~IA~~ 278 (396)
T COG0626 203 IVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRA-NTGAVLSPFDAWLLLRGLRTLA---LRMERHNENALKIAEF 278 (396)
T ss_pred EEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHh-hcCCCCCHHHHHHHHhccchHH---HHHHHHHHHHHHHHHH
Confidence 999999999973 4587776554 44443221111 2445677888877766666553 4678888888889999
Q ss_pred hccCCCce-eecC----------------CCCCEEEEEecC
Q 011567 384 LSDIHGLS-IASN----------------PESPIVFLILEK 407 (483)
Q Consensus 384 L~~~~~~~-i~~~----------------~~~~i~~l~l~~ 407 (483)
|++.+.+. +.-+ ..+.++.+.+++
T Consensus 279 L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~ 319 (396)
T COG0626 279 LADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN 319 (396)
T ss_pred HhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC
Confidence 98866543 2211 246688888853
No 337
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.75 E-value=8.9e-16 Score=152.82 Aligned_cols=310 Identities=12% Similarity=0.097 Sum_probs=201.4
Q ss_pred ChHHHHHHHHHHHhcCCCCCCCCCccc-Ch---HHHHHHHHHHHhhhCCC---CEEEe-cccHHHHHhhhhhhccCCcEE
Q 011567 125 HEKLLESCTSALEKYGVGSCGPRGFYG-TI---DVHLDCEARIAKFLGTP---DSILY-SYGLSTMFSAIPCFCKKGDLI 196 (483)
Q Consensus 125 ~p~i~~a~~~~l~~~g~g~~~~~~~~g-~~---~~~~~l~~~La~~~g~e---~~i~~-~sG~~a~~~ai~~~~~~gdiI 196 (483)
+..+.+++.+.+..|.....+...... .. +...++++.|.++++.+ +++++ +||+.|+++++..+.+++|.+
T Consensus 4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~ 83 (349)
T TIGR01364 4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVA 83 (349)
T ss_pred CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeE
Confidence 357889999998876521222211111 22 56788899999999952 35566 559999999999988777643
Q ss_pred E-EcCCchh-HHHhHhhhcCCeEEEec------CCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHH
Q 011567 197 V-ADEGVHW-GIQNGLYLSRSTVVYFK------HNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELI 268 (483)
Q Consensus 197 ~-~~~~~h~-s~~~g~~~s~~~v~~~~------~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~ 268 (483)
+ +..+.++ ...+-++..|. +..+. ..+..+++++... . ..++|.+.+.-+.+|...|
T Consensus 84 l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~v~~th~ETstGv~~~----- 148 (349)
T TIGR01364 84 DYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEIS--E-------DAAYVHYCANETIHGVEFR----- 148 (349)
T ss_pred EEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCCC--C-------CCCEEEEcCCCCcccEecc-----
Confidence 3 3333332 23344455555 43333 3344444433211 1 2567777777777898776
Q ss_pred HHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccHHHHHHHHhcCC-------
Q 011567 269 RLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSS------- 340 (483)
Q Consensus 269 ~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~~~~~~~~~~~~------- 340 (483)
++++.|++++++|.++++|.. .++.++.|++++|..|++|+.| |+++.+++..+.+.....
T Consensus 149 ~l~~~~~~l~iVDavss~g~~-----------~id~~~~d~~~~ssqK~lgP~Glg~l~~s~~~~~~~~~~~~~~~~~~~ 217 (349)
T TIGR01364 149 ELPDVKNAPLVADMSSNILSR-----------PIDVSKFGLIYAGAQKNIGPAGLTVVIVRKDLLGRASRITPSMLNYKI 217 (349)
T ss_pred eecccCCCeEEEEccccccCc-----------cCCHHHccEEEEecccccCCCceEEEEECHHHHhhcccCCCCcchHHH
Confidence 777789999999999997643 2333556899999999999887 888888888765432111
Q ss_pred ----ceeecCCCcHHHHHHHHHHHHHHhc---CcHHHHHHHHHHHHHHHhhccCCCceeec-C--CCC-CEEEEEecCCC
Q 011567 341 ----GYVFSASLPPYLASAAITAIDVLEE---NPDLITKLKKNTAILRTGLSDIHGLSIAS-N--PES-PIVFLILEKST 409 (483)
Q Consensus 341 ----~~~fs~~~~p~~~aaa~~al~~l~~---~~~~~~~l~~~~~~l~~~L~~~~~~~i~~-~--~~~-~i~~l~l~~~~ 409 (483)
...+ .+.|-....+..++|+++.+ .+.+.++.+++.+++++.|++++|+.... + ..+ .++.+.+++.
T Consensus 218 ~~~~~~~~-~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~- 295 (349)
T TIGR01364 218 HAENDSMY-NTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE- 295 (349)
T ss_pred HHhcCCCC-CCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh-
Confidence 1111 23344555566688998864 25788889999999999999987664332 1 234 4566766431
Q ss_pred CCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 410 GSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 410 ~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
....++... +.+.|+.+.+... ..+.+|+++...+|+||||+++++|+++.++
T Consensus 296 -------~~~~~~~~~-~~~~Gi~~~~~~~-------~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 296 -------ELEKRFLKE-AEERGLVSLKGHR-------SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred -------hHhHHHHHH-HHHCCCcccCCcc-------ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 112344443 4456995544322 1245999999999999999999999987653
No 338
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.75 E-value=7.7e-16 Score=154.20 Aligned_cols=310 Identities=17% Similarity=0.184 Sum_probs=192.7
Q ss_pred hHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhH-hhhcCCeEEEe-----------
Q 011567 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG-LYLSRSTVVYF----------- 220 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g-~~~s~~~v~~~----------- 220 (483)
.+-..+||+.+++++|.+.++.++||+.|+..+....+++||.| ...+|+....+ +...|...+-+
T Consensus 77 d~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~ 154 (460)
T PRK13237 77 SRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSD 154 (460)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEeeecccccccccC
Confidence 34467899999999999999999999999888777778999975 66667666555 66666644322
Q ss_pred ---cCC-CHHHHHHHHHHhhhhhhhccCccEEEEEec-ccCCCCCcc---ChHHHHHHHHHcCcEEEEeCcccccc---c
Q 011567 221 ---KHN-DMDSLRNTLERVTADNKRAKKLRRYIVVEA-VYQNSGQIA---PLDELIRLKEKYRFRVFLDESNSFGV---L 289 (483)
Q Consensus 221 ---~~~-d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~-v~~~~G~i~---~L~~l~~l~~k~~~~li~DEa~s~g~---l 289 (483)
+.| |++.|++.+++... ..+++|.++- ++..+|..+ +++++.++|++||+.||.|.++.+|- +
T Consensus 155 ~p~tgnlD~d~Le~~I~~~~~------~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI 228 (460)
T PRK13237 155 HPFKGNVDLDKLQALIDEVGA------ENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFI 228 (460)
T ss_pred CCCCCCcCHHHHHHHhccccC------CccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhh
Confidence 222 88999998875321 1233333332 333346655 47999999999999999999998762 1
Q ss_pred -----cCCCCccc----cccCCCCCceeEEEcccccccc-CCCceee-ccHHHHHHHHhcCCce-eecC--CCcH-HHHH
Q 011567 290 -----GRSGRGLT----EHCGVPVDKIDIVTAAMGHALA-TEGGFCT-GSARVVDHQRLSSSGY-VFSA--SLPP-YLAS 354 (483)
Q Consensus 290 -----g~~G~g~~----~~~~v~~~~~Di~~~s~~K~lg-~~GG~i~-~~~~~~~~~~~~~~~~-~fs~--~~~p-~~~a 354 (483)
|..|+.+. |.+ .-.|+++.|++|.++ ..||+++ .++++.+..+.....| .|.+ ++.. -..+
T Consensus 229 ~~re~~y~~~~i~ei~~e~~----s~aD~~t~S~~K~~~~~~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~a 304 (460)
T PRK13237 229 KEREEGYQDKSIKEIVHEMF----SYADGCTMSGKKDCLVNIGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEA 304 (460)
T ss_pred cccccccCCCcHhHHhhhcc----CcCcEEEEeCCCCCCCCCceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHH
Confidence 11122211 111 234899999999997 4478765 5677888776553222 1211 1211 1112
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEE
Q 011567 355 AAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFV 434 (483)
Q Consensus 355 aa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v 434 (483)
.|....+.++. +..+..-++.++|.+.|.+. |+++..+.++.-+++....-......+.--.+.++.++..+.||-.
T Consensus 305 lAvgl~E~~~~--~y~~~ri~~~~~l~~~L~~~-Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~ 381 (460)
T PRK13237 305 MAIGIEESVQY--EYIEHRVGQVRYLGEKLLAA-GVPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRS 381 (460)
T ss_pred HHhHHHhhchH--HHHHHHHHHHHHHHHHHHHC-CCceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCe
Confidence 22222222222 46666667889999999885 9999877777777775432111111122234566666666677754
Q ss_pred Eee------cccccccCCCC--CceEEEccC-CCCHHHHHHHHHHHHHHHHH
Q 011567 435 VTS------KRSMLDKCRLP--VGIRLFVSA-AHSEADLVKACESLKRISAV 477 (483)
Q Consensus 435 ~~~------~~~~~~~~~~~--~~lRi~~~~-~~t~edi~~~~~~l~~~~~~ 477 (483)
.-. +.|.-.....+ .-+|++++- ..|.+++|.+++++..+.++
T Consensus 382 ~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 382 MERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred EeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 311 11111111112 239997765 56999999999999887654
No 339
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.75 E-value=2.9e-16 Score=157.44 Aligned_cols=225 Identities=16% Similarity=0.129 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHH----hHhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~----~g~~~s~~~v~~~~~~d~~~Le 229 (483)
+...+||++++++.|.+.++.++||++|+..++.++.++||.|++....|+... ..+...|.++..++.++.+.++
T Consensus 64 P~~~~lE~~la~leg~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~~ 143 (384)
T PRK06434 64 PTVQAFEEKYAVLENAEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSLD 143 (384)
T ss_pred hhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhhee
Confidence 667899999999999999999999999999999999999998888765444333 4455667888888765544443
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+. . .++++|++|.+.++++.++|+++|.++|++++ +++|.+++.+..++ . .+ ...|+
T Consensus 144 --l~---~------~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~---p----l~---~gaDi 200 (384)
T PRK06434 144 --FD---P------SNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQN---P----LD---LGADV 200 (384)
T ss_pred --ec---C------CCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcccCC---c----hh---cCCCE
Confidence 11 1 13789999999999999999999999999998 56799975443321 1 12 23499
Q ss_pred EEccccccccC----CCceeec-cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 310 VTAAMGHALAT----EGGFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 310 ~~~s~~K~lg~----~GG~i~~-~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
++.|.+|.+++ .||.++. ++++.+.++... ..++..++|+.++.++..|+.+ +.++++.++++..+.+.|
T Consensus 201 vv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~--~~~G~~~~~~~A~l~~~gL~tL---~~R~~r~~~~a~~~a~~L 275 (384)
T PRK06434 201 VIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERR--KTLGSNPDPIQAYLALRGLKTL---GLRMEKHNKNGMELARFL 275 (384)
T ss_pred EEeecccccCCCCCceEEEEecCcHHHHHHHHHHH--HhcCCCCCHHHHHHHHhCCCcH---HHHHHHHHHHHHHHHHHH
Confidence 99999999963 2677755 555655554321 1234456788877776666655 457888899999999999
Q ss_pred ccCCCce-eec----------CCCCCEEEEEec
Q 011567 385 SDIHGLS-IAS----------NPESPIVFLILE 406 (483)
Q Consensus 385 ~~~~~~~-i~~----------~~~~~i~~l~l~ 406 (483)
++.|.+. +.- ...+.++.+.++
T Consensus 276 ~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~ 308 (384)
T PRK06434 276 RDSKKISNVYYPDTEIGKKVLRGFGGMLSFELR 308 (384)
T ss_pred HcCCCccEEECCChHHHHHhcCCCCceEEEEEC
Confidence 8876543 211 124678888884
No 340
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.74 E-value=9.4e-16 Score=164.48 Aligned_cols=303 Identities=14% Similarity=0.108 Sum_probs=188.2
Q ss_pred cccChHHHHHHHHHHHhhhCCCCEEEe-cccHHHHHhhh---hhhc-----cCCcEEEEcCCchhHHHhHhhhcCCeEEE
Q 011567 149 FYGTIDVHLDCEARIAKFLGTPDSILY-SYGLSTMFSAI---PCFC-----KKGDLIVADEGVHWGIQNGLYLSRSTVVY 219 (483)
Q Consensus 149 ~~g~~~~~~~l~~~La~~~g~e~~i~~-~sG~~a~~~ai---~~~~-----~~gdiI~~~~~~h~s~~~g~~~s~~~v~~ 219 (483)
..|+.+...++++.+++++|.+.+-++ ++|+.+..+++ +++. ..+++|+++...|++....+...|.+++.
T Consensus 538 sQG~lq~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~ 617 (954)
T PRK12566 538 AEGYRAMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVI 617 (954)
T ss_pred hcCHHHHHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEE
Confidence 456778889999999999999998888 58876665554 4431 23568889999997766667778899988
Q ss_pred ecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCC
Q 011567 220 FKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGR 294 (483)
Q Consensus 220 ~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~ 294 (483)
++.+ |+++|++.+++... ++++|++..+.+.++...|+++|+++|+++|+++++|.++..+..+-
T Consensus 618 Vp~D~~G~iDle~L~a~I~~~~~-------~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l--- 687 (954)
T PRK12566 618 VECDPDGNVDLDDLKAKAAAAGD-------RLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGL--- 687 (954)
T ss_pred eccCCCCCcCHHHHHHHhhccCC-------CEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCC---
Confidence 8764 78899988865433 36666666555554555669999999999999999999997543321
Q ss_pred ccccccCCCCCceeEEEcccccccc-C--CC----ceeeccHHHHHHHHhcC----C---ceeecCC-CcHHHHHHHHHH
Q 011567 295 GLTEHCGVPVDKIDIVTAAMGHALA-T--EG----GFCTGSARVVDHQRLSS----S---GYVFSAS-LPPYLASAAITA 359 (483)
Q Consensus 295 g~~~~~~v~~~~~Di~~~s~~K~lg-~--~G----G~i~~~~~~~~~~~~~~----~---~~~fs~~-~~p~~~aaa~~a 359 (483)
..... .++|+++++++|+|+ + .| |++..++.+...++... . +-.-..+ .+...+..+..+
T Consensus 688 ~~Pg~-----~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A 762 (954)
T PRK12566 688 ARPAD-----IGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPIS 762 (954)
T ss_pred CChhh-----cCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHH
Confidence 00011 344999999999996 2 22 23333443433443211 0 0000111 111122223334
Q ss_pred HHHHhc-CcHHHHHH----HHHHHHHHHhhccCCCceeecCCCCCE---EEEEecCCCCCchhhHHHHHHHHHHHHHhCC
Q 011567 360 IDVLEE-NPDLITKL----KKNTAILRTGLSDIHGLSIASNPESPI---VFLILEKSTGSMKNDLQLLEDIADWALKEDG 431 (483)
Q Consensus 360 l~~l~~-~~~~~~~l----~~~~~~l~~~L~~~~~~~i~~~~~~~i---~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~G 431 (483)
+.++.. ..+ ..+. ..++.+++++|.+..++... ....++ +.+.+...... ......+++++++ ++|
T Consensus 763 ~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~~-~~~~~~~hEfii~~~~l~~~---~g~~~~dvakRL~-d~G 836 (954)
T PRK12566 763 WMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVLYR-GRNERVAHECILDLRPLKAQ---TGISEEDVAKRLM-DYG 836 (954)
T ss_pred HHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCcC-CCCCCeeeEEEEEccccccc---cCCCHHHHHHHHH-HCC
Confidence 444432 223 3333 45888999999764333332 112232 22222110000 0011246788766 679
Q ss_pred EEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 432 VFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 432 v~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
+......+|. ++.+|++++-..|++|||+++++++.+.+++
T Consensus 837 ihapt~~fPv------~~~LmIepTE~eskeEIDrf~eAL~~I~~e~ 877 (954)
T PRK12566 837 FHAPTMSFPV------PGTLMVEPTESESKAELDRFVEAMLSIRAEI 877 (954)
T ss_pred cEEeEEeecc------CCEEEEEeeeeCCHHHHHHHHHHHHHHHHHH
Confidence 9877654432 3569999999999999999999999988775
No 341
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.74 E-value=9.5e-16 Score=155.18 Aligned_cols=302 Identities=12% Similarity=0.123 Sum_probs=189.3
Q ss_pred hHHHHHHHHHHHhhhCCC---CEEEecccH-HHHHhhhhhhcc---CCcEEEEcCCchhHHHhHhhhcCCeEEEecC---
Q 011567 153 IDVHLDCEARIAKFLGTP---DSILYSYGL-STMFSAIPCFCK---KGDLIVADEGVHWGIQNGLYLSRSTVVYFKH--- 222 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e---~~i~~~sG~-~a~~~ai~~~~~---~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~--- 222 (483)
..+..++++++++++|.. .++++++|+ .++..++.++.. ++|.|+++...|.++.+++...|.+++.++.
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d 183 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLD 183 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeec
Confidence 357789999999999987 688889998 577777776652 5899999999999999999999998887762
Q ss_pred -----CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccc
Q 011567 223 -----NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT 297 (483)
Q Consensus 223 -----~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~ 297 (483)
-|+++|++.+++... +.+.+|+..+.+...|..+|+++|.++|++||+++|+|++|+.+..- -+...
T Consensus 184 ~~~~~iD~e~Le~aIt~~~~------kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~--~~~~~ 255 (444)
T TIGR03531 184 GDELTTDVEDIERAIEEIGP------DNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNK--YMELI 255 (444)
T ss_pred CcCCCcCHHHHHHHHHhccC------CCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChh--hhhhh
Confidence 178899998875321 13555666555555578899999999999999999999999864211 00010
Q ss_pred cccCCCCCceeEEEccccccccC-C-Cceeec-cHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHH-hcCcHHHHHH
Q 011567 298 EHCGVPVDKIDIVTAAMGHALAT-E-GGFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL-EENPDLITKL 373 (483)
Q Consensus 298 ~~~~v~~~~~Di~~~s~~K~lg~-~-GG~i~~-~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l-~~~~~~~~~l 373 (483)
+ .+.....+|+++.|++|.+.. . ||+++. ++++++.++... .......|.. .+....+..- +...+++++.
T Consensus 256 ~-~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y---~g~~~~s~~~-~~~~~ll~~G~~g~~~li~~~ 330 (444)
T TIGR03531 256 N-KAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSY---PGRASASPSL-DVLITLLSLGSKGYLELLKER 330 (444)
T ss_pred h-ccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhc---cCCCCChHHH-HHHHHHHHhCHHHHHHHHHHH
Confidence 0 112111358889999999974 3 355545 677777765432 1122222322 2222222211 2234677888
Q ss_pred HHHHHHHHHhhccCC---CceeecCCCCCE-EEEEecCCCCCchhhHHHHHHHHHHHHHhCCEE----EEeeccccc---
Q 011567 374 KKNTAILRTGLSDIH---GLSIASNPESPI-VFLILEKSTGSMKNDLQLLEDIADWALKEDGVF----VVTSKRSML--- 442 (483)
Q Consensus 374 ~~~~~~l~~~L~~~~---~~~i~~~~~~~i-~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~----v~~~~~~~~--- 442 (483)
.++.+++.+.|+++. |-.+...+..|| +.+.+.... ......+.. +|-.++|- +.+.....+
T Consensus 331 ~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~------~~~~~~~g~-~l~~~~v~g~r~v~~~~~~~~~~~ 403 (444)
T TIGR03531 331 KEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK------GKDPTMLGS-MLYSRRVTGPRVVTNGDSKTVGGC 403 (444)
T ss_pred HHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc------ccCHHHHHH-HHHhCCCCCceeecCCCceEECCE
Confidence 888888888887652 555554445554 333443211 111223443 33334442 111110000
Q ss_pred --------ccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 443 --------DKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 443 --------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
....+.+-|-++....+|++|||.+++.|+++
T Consensus 404 ~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 404 EFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred EeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 00011233666777789999999999999876
No 342
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.74 E-value=3.8e-17 Score=162.63 Aligned_cols=232 Identities=19% Similarity=0.233 Sum_probs=155.4
Q ss_pred hHHHHHHHHHHHhhhCCCCEEEecccH-HHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC--------
Q 011567 153 IDVHLDCEARIAKFLGTPDSILYSYGL-STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------- 223 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e~~i~~~sG~-~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------- 223 (483)
..+..+.++..|+.+|.+++++..+|+ .+|.+++.+++++||.|++++.+|-|+..++.++|..+++++..
T Consensus 65 ~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi~~ 144 (417)
T PF01276_consen 65 EGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGIIG 144 (417)
T ss_dssp BTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-BE
T ss_pred ccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCCcc
Confidence 347889999999999999999997776 77899999999999999999999999999999999988776432
Q ss_pred --CH-----HHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCcc
Q 011567 224 --DM-----DSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGL 296 (483)
Q Consensus 224 --d~-----~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~ 296 (483)
+. +.+++.+++.... +..+.++++.|.|. |.+.++++|+++|++++..|++||+|+.- ++-. ...
T Consensus 145 ~i~~~~~~~~~i~~~l~~~p~~----k~~~~vvlt~PTY~--Gv~~di~~I~~~~h~~~~~llvDEAhGah-~~F~-~lp 216 (417)
T PF01276_consen 145 GISPDEFNEEDIEEALKEHPDA----KAPRLVVLTSPTYY--GVCYDIKEIAEICHKHGIPLLVDEAHGAH-FGFH-PLP 216 (417)
T ss_dssp EB-GGGGSHHHHHHHHHHCTTC----HCESEEEEESS-TT--SEEE-HHHHHHHHCCTECEEEEE-TT-TT-GGCS-GGG
T ss_pred CCChhhhhHHHHHHHHHhCccc----cCceEEEEeCCCCC--eEEECHHHHHHHhcccCCEEEEEcccccc-ccCC-CCc
Confidence 34 7788888776542 00233788888775 99999999999999999999999999632 2211 111
Q ss_pred ccccCCCC----CceeEEEcccccccc--CCCceeeccHHH-H--HHHHhcCCceeecCCCcHHHHHHHHHHHHHH-h-c
Q 011567 297 TEHCGVPV----DKIDIVTAAMGHALA--TEGGFCTGSARV-V--DHQRLSSSGYVFSASLPPYLASAAITAIDVL-E-E 365 (483)
Q Consensus 297 ~~~~~v~~----~~~Di~~~s~~K~lg--~~GG~i~~~~~~-~--~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l-~-~ 365 (483)
.....+.. +..++++.|.+|.++ +.++++-.+..- + +.++.. .....|+|++-..++..-.+.+++ . +
T Consensus 217 ~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~-l~~~~TTSPSY~lmASlD~a~~~m~~~~ 295 (417)
T PF01276_consen 217 RSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEA-LSMHQTTSPSYPLMASLDVARAQMEEEE 295 (417)
T ss_dssp TTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHH-HHHHS-SS--HHHHHHHHHHHHHHSHHH
T ss_pred cchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHH-HHHHcCCChHHHHHHHHHHHHHHHhhhh
Confidence 11122211 223399999999998 345665332221 2 222221 122234555556666666777777 2 3
Q ss_pred CcHHHHHHHHHHHHHHHhh---ccCCCceee
Q 011567 366 NPDLITKLKKNTAILRTGL---SDIHGLSIA 393 (483)
Q Consensus 366 ~~~~~~~l~~~~~~l~~~L---~~~~~~~i~ 393 (483)
..++.++..+++..+|+.+ +++.++.+.
T Consensus 296 G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~ 326 (417)
T PF01276_consen 296 GRELLEEAIELAEEFRKKINRLNDIWGFKVL 326 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCT-SSEES
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCceEecC
Confidence 4568888889999999998 566555543
No 343
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.73 E-value=1.6e-15 Score=151.81 Aligned_cols=310 Identities=14% Similarity=0.079 Sum_probs=198.1
Q ss_pred CChHHHHHHHHHHHhcC-CCCCCCCCcccCh---HHHHHHHHHHHhhhCC-C--CEEEe-cccHHHHHhhhhhhccCCcE
Q 011567 124 GHEKLLESCTSALEKYG-VGSCGPRGFYGTI---DVHLDCEARIAKFLGT-P--DSILY-SYGLSTMFSAIPCFCKKGDL 195 (483)
Q Consensus 124 ~~p~i~~a~~~~l~~~g-~g~~~~~~~~g~~---~~~~~l~~~La~~~g~-e--~~i~~-~sG~~a~~~ai~~~~~~gdi 195 (483)
-++++.+|+...+..++ .+.+.+....-.. +...+..+.|+++++. + +++++ ++|+.++++++..+..+++.
T Consensus 14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~ 93 (360)
T PRK05355 14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKK 93 (360)
T ss_pred CCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCCe
Confidence 35789999888876542 1111111111122 6788999999999996 2 24455 78889999998888877653
Q ss_pred EE-EcCCchhH-HHhHhhhcCCeE-EEec--C--CCHHHHHH-HHHHhhhhhhhccCccEEEEEecccCCCCCcc-ChHH
Q 011567 196 IV-ADEGVHWG-IQNGLYLSRSTV-VYFK--H--NDMDSLRN-TLERVTADNKRAKKLRRYIVVEAVYQNSGQIA-PLDE 266 (483)
Q Consensus 196 I~-~~~~~h~s-~~~g~~~s~~~v-~~~~--~--~d~~~Le~-~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~-~L~~ 266 (483)
++ +..+.++. ..+-++..|... ...+ . .+..++++ .+++ ..++|.+.+.-+.+|.+. |+++
T Consensus 94 ~l~i~~G~fg~r~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~l~~----------~~~~V~~th~eTstGv~~~~i~~ 163 (360)
T PRK05355 94 ADYVDTGSWSKKAIKEAKKYGEVNVAASSEDDGFTYIPPLDEWQLSD----------DAAYVHYTSNETIDGTEFHELPD 163 (360)
T ss_pred EEEEECCHHHHHHHHHHHHhCCceEEecccccCCCCCCChhhccCCC----------CCCEEEEccCCCcceEecCcccc
Confidence 32 33333322 233444445432 1212 1 12334444 3321 256787777777889997 6776
Q ss_pred HHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccHHHHHHHHhc-C-----
Q 011567 267 LIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLS-S----- 339 (483)
Q Consensus 267 l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~~~~~~~~~~-~----- 339 (483)
| ||+++++|.++++|.. .++.++.|++++|..|++|+.| |+++.+++..+.+... .
T Consensus 164 i------~g~l~vVDavss~g~~-----------~idv~~~d~~~~ssqK~lgP~Glg~l~~s~~~l~~~~~~~~~~~~~ 226 (360)
T PRK05355 164 T------GDVPLVADMSSDILSR-----------PIDVSKFGLIYAGAQKNIGPAGLTIVIVREDLLGRALPSIPSMLDY 226 (360)
T ss_pred c------CCCcEEEEcCccccCc-----------cCCHHHccEEEEeccccccCCceEEEEECHHHHhhcccCCChHHHH
Confidence 6 8999999999997643 2333556899999999999887 8888888887765431 1
Q ss_pred -----CceeecCCCcHHHHHHHHHHHHHHhcC---cHHHHHHHHHHHHHHHhhccCCCceeecC--CCC-CEEEEEecCC
Q 011567 340 -----SGYVFSASLPPYLASAAITAIDVLEEN---PDLITKLKKNTAILRTGLSDIHGLSIASN--PES-PIVFLILEKS 408 (483)
Q Consensus 340 -----~~~~fs~~~~p~~~aaa~~al~~l~~~---~~~~~~l~~~~~~l~~~L~~~~~~~i~~~--~~~-~i~~l~l~~~ 408 (483)
....+ .+.|-..+.+..++|+++.+. +.+.++.+++.+++++.|++++.+....+ ..+ .++.+.+++.
T Consensus 227 ~~~~~~~~~~-~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~ 305 (360)
T PRK05355 227 KTHADNDSMY-NTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADE 305 (360)
T ss_pred HHHHhcCCcc-CCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCCh
Confidence 01111 234555566666889988653 47888999999999999999743222111 245 4577776431
Q ss_pred CCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 409 TGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 409 ~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
....++...+ .++|+.+..... ..+.+|+++...+|++||++++++|+++++.
T Consensus 306 --------~~~~~~~~~~-~~~Gi~~~~~~~-------~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 306 --------ELDKKFLAEA-KAAGLVGLKGHR-------SVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred --------HHHHHHHHHH-HHCCCcccCCCC-------ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 1123444443 456998743321 1245999999999999999999999997653
No 344
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.72 E-value=1.6e-15 Score=166.54 Aligned_cols=304 Identities=17% Similarity=0.150 Sum_probs=186.0
Q ss_pred ccChHHHHHHHHHHHhhhCCCCEEEec-ccHHHHHh---hhhhh-ccCC----cEEEEcCCchhHHHhHhhhcCCeEEEe
Q 011567 150 YGTIDVHLDCEARIAKFLGTPDSILYS-YGLSTMFS---AIPCF-CKKG----DLIVADEGVHWGIQNGLYLSRSTVVYF 220 (483)
Q Consensus 150 ~g~~~~~~~l~~~La~~~g~e~~i~~~-sG~~a~~~---ai~~~-~~~g----diI~~~~~~h~s~~~g~~~s~~~v~~~ 220 (483)
-|+.+...++++.|++++|.+.+-++. +|++++.+ +++.+ .++| ++|++++..|++....+...|.+++.+
T Consensus 538 qG~l~~i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v 617 (954)
T PRK05367 538 AGYRELIDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVV 617 (954)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEE
Confidence 345577889999999999999877774 55555533 34443 2344 479999999999999999999999888
Q ss_pred cCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCC-ccChHHHHHHHHHcCcEEEEeCccccccccCCCC
Q 011567 221 KHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQ-IAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGR 294 (483)
Q Consensus 221 ~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~-i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~ 294 (483)
+.+ |+++|++.+++... ++++|++...... |. ..|+++|+++|+++|+++++|.++..+.++-.-.
T Consensus 618 ~~d~~G~iD~~~L~~~i~~~~~-------~la~V~it~pst~-G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~p 689 (954)
T PRK05367 618 ACDENGNIDLDDLRAKAEEHAD-------NLAAIMITYPSTH-GVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARP 689 (954)
T ss_pred CCCCCCCcCHHHHHHHHhccCC-------CeEEEEEEcCCCC-eeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCCh
Confidence 753 67888887765322 2455544444333 55 4789999999999999999999997664442100
Q ss_pred ccccccCCCCCceeEEEcccccccc-CCC------ceeeccHHHHHHHHhcCCce-ee----cC-CCcHH-HHHHHHHHH
Q 011567 295 GLTEHCGVPVDKIDIVTAAMGHALA-TEG------GFCTGSARVVDHQRLSSSGY-VF----SA-SLPPY-LASAAITAI 360 (483)
Q Consensus 295 g~~~~~~v~~~~~Di~~~s~~K~lg-~~G------G~i~~~~~~~~~~~~~~~~~-~f----s~-~~~p~-~~aaa~~al 360 (483)
.. ..+|+++++++|+|+ +.| |++..++.+...+.....+. .+ +. ...+. .+..+..+.
T Consensus 690 ---g~-----~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~ 761 (954)
T PRK05367 690 ---GD-----IGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISW 761 (954)
T ss_pred ---hh-----cCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHH
Confidence 11 235999999999996 211 46655554443332111000 00 00 01122 222233344
Q ss_pred HHHhc-C-cHHHHH---HHHHHHHHHHhhccCCCceeecCCCCC---EEEEEecCCCCCchhhHHHHHHHHHHHHHhCCE
Q 011567 361 DVLEE-N-PDLITK---LKKNTAILRTGLSDIHGLSIASNPESP---IVFLILEKSTGSMKNDLQLLEDIADWALKEDGV 432 (483)
Q Consensus 361 ~~l~~-~-~~~~~~---l~~~~~~l~~~L~~~~~~~i~~~~~~~---i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv 432 (483)
.++.. . +.+.+. ...++.++.++|++...+...++ ..+ -+.+.+..... .......++++++ .+.|+
T Consensus 762 ~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~-~~~~~~e~i~~~~~~~~---~~g~~~~di~krL-~d~G~ 836 (954)
T PRK05367 762 MYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGA-NGRVAHECILDLRPLKE---STGITVDDIAKRL-IDYGF 836 (954)
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCC-CCCcccceEEEeecccc---cCCCCHHHHHHHH-HHCCC
Confidence 44332 1 223333 33788999999976423322221 112 12222211000 0001235678875 45699
Q ss_pred EEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 433 FVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 433 ~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
......++. ++.++|+++-..|++|||+++++++.+..++-.
T Consensus 837 ~~~t~~~pv------~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 837 HAPTMSFPV------AGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred eEeecCCcc------CCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 876644432 355999999999999999999999998877643
No 345
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.71 E-value=4.3e-15 Score=160.48 Aligned_cols=303 Identities=15% Similarity=0.133 Sum_probs=194.1
Q ss_pred cccChHHHHHHHHHHHhhhCCCCEEEe-cccHHHHHh---hhhhhc-----cCCcEEEEcCCchhHHHhHhhhcCCeEEE
Q 011567 149 FYGTIDVHLDCEARIAKFLGTPDSILY-SYGLSTMFS---AIPCFC-----KKGDLIVADEGVHWGIQNGLYLSRSTVVY 219 (483)
Q Consensus 149 ~~g~~~~~~~l~~~La~~~g~e~~i~~-~sG~~a~~~---ai~~~~-----~~gdiI~~~~~~h~s~~~g~~~s~~~v~~ 219 (483)
.-|+.+...++++.|++++|.+.+-++ ++|+.+..+ +++.+. .+.++|+++...|++....+...|.+++.
T Consensus 525 sqG~lq~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~ 604 (939)
T TIGR00461 525 VEGYQELIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVP 604 (939)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEE
Confidence 445667889999999999999976666 666665544 445432 24568999999999988888888999988
Q ss_pred ecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC-hHHHHHHHHHcCcEEEEeCccccccccCCC
Q 011567 220 FKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP-LDELIRLKEKYRFRVFLDESNSFGVLGRSG 293 (483)
Q Consensus 220 ~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~-L~~l~~l~~k~~~~li~DEa~s~g~lg~~G 293 (483)
++.+ |+++|++.+++... ++++|++....+ .|.+.| +++|.++|+++|.++++|.++..+..+.
T Consensus 605 V~~d~~G~iDle~L~~~i~~~~~-------~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l-- 674 (939)
T TIGR00461 605 VNCDQDGNIDLVDLKNKAEQHGD-------ELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGL-- 674 (939)
T ss_pred eccCCCCCcCHHHHHHHHhhcCC-------ceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCC--
Confidence 8763 78999998876333 266666665554 588877 9999999999999999999996543221
Q ss_pred CccccccCCCCCceeEEEcccccccc-C-----CC-ceeeccHHHHHHHHhcCC-------------ceeec-CCCcHHH
Q 011567 294 RGLTEHCGVPVDKIDIVTAAMGHALA-T-----EG-GFCTGSARVVDHQRLSSS-------------GYVFS-ASLPPYL 352 (483)
Q Consensus 294 ~g~~~~~~v~~~~~Di~~~s~~K~lg-~-----~G-G~i~~~~~~~~~~~~~~~-------------~~~fs-~~~~p~~ 352 (483)
.. ....++|++++|.+|+|+ + +| |+++.++.+...+..... +-+-+ ...+...
T Consensus 675 ---~~---Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~ 748 (939)
T TIGR00461 675 ---TS---PGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASI 748 (939)
T ss_pred ---CC---ccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHH
Confidence 11 011345999999999886 1 11 677776654433321100 00111 0122233
Q ss_pred HHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhccCCCceeecCC-CCCE---EEEEecCCCCCchhhHHHHHHHHHHH
Q 011567 353 ASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASNP-ESPI---VFLILEKSTGSMKNDLQLLEDIADWA 426 (483)
Q Consensus 353 ~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~-~~~i---~~l~l~~~~~~~~~~~~~~~~i~~~~ 426 (483)
+..+...+..+-.+ .+..+....++.|+.++|++ ++++..+. .+++ +.+.+... .........++++++
T Consensus 749 ~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~---~~~~g~~~~dIakrL 823 (939)
T TIGR00461 749 LPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPL---KAKTGIEAIDVAKRL 823 (939)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccch---hhhcCCCHHHHHHHH
Confidence 33333344444221 23455566688999999976 45554332 2333 33333211 011112356788886
Q ss_pred HHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 427 LKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 427 l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
++ +|+......+|. ++.+-|+++-..|++|||++++++.++.+++-
T Consensus 824 ~d-~G~hapt~~~pv------~g~lmiepTE~eskeelD~f~~al~~I~~e~~ 869 (939)
T TIGR00461 824 QD-YGFHAPTLSFPV------PGTLMVEPTESESLEELDRFCDAMIAIKEEIN 869 (939)
T ss_pred Hh-CCeeccccCCcc------CCeEEEEeeccCCHHHHHHHHHHHHHHHHHHH
Confidence 65 588765544432 23467788889999999999999988876654
No 346
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.69 E-value=1.2e-14 Score=153.27 Aligned_cols=304 Identities=14% Similarity=0.165 Sum_probs=195.0
Q ss_pred hHHHHHHHHHHHhhhCCCCEEEecccH-HHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC--------
Q 011567 153 IDVHLDCEARIAKFLGTPDSILYSYGL-STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------- 223 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e~~i~~~sG~-~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------- 223 (483)
..+..+.++..|+.+|.+++.+..+|+ .+|.+++.+.+++||.|++++.+|-|+..++.++|++.+++...
T Consensus 194 ~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g 273 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILG 273 (714)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCcc
Confidence 347789999999999999999887775 77889999999999999999999999999999999988876421
Q ss_pred --C-----HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCcccccc-ccCCCCc
Q 011567 224 --D-----MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGV-LGRSGRG 295 (483)
Q Consensus 224 --d-----~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~-lg~~G~g 295 (483)
+ .+.+++.+++.... +.++++|++.|.|- |.+.++++|+++|+.++ +++||+|+.-. +.+--++
T Consensus 274 ~I~~~~~~~e~i~~~i~~~p~a----k~p~~~vit~pTYd--G~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~ 345 (714)
T PRK15400 274 GIPQSEFQHATIAKRVKETPNA----TWPVHAVITNSTYD--GLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEG 345 (714)
T ss_pred CCCccccCHHHHHHHHHhCccc----cCccEEEEECCCCc--cEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCC
Confidence 2 67888888765421 12346888888774 99999999999999887 68999986421 2211011
Q ss_pred ccc-ccCCCCCceeEEEccccccccC--CCceeeccHHHHHHHHhc-CCceeecCCCcHHHHHHHHHHHHHHhc--CcHH
Q 011567 296 LTE-HCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLS-SSGYVFSASLPPYLASAAITAIDVLEE--NPDL 369 (483)
Q Consensus 296 ~~~-~~~v~~~~~Di~~~s~~K~lg~--~GG~i~~~~~~~~~~~~~-~~~~~fs~~~~p~~~aaa~~al~~l~~--~~~~ 369 (483)
... ..+-++++..+++.|.+|.+++ .+.++-.+.. +++-+.+ .....-|+|.+-..+|..-.+..+++. ..++
T Consensus 346 ~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~-vd~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~~l 424 (714)
T PRK15400 346 KCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-VNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRL 424 (714)
T ss_pred cChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCC-CCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHH
Confidence 111 1222222223899999999973 2333311111 1211111 111122344444455555566677763 4578
Q ss_pred HHHHHHHHHHHHHhhccCCC------ceeecCC----------------------------CCCEEEEE-ecC--CCCCc
Q 011567 370 ITKLKKNTAILRTGLSDIHG------LSIASNP----------------------------ESPIVFLI-LEK--STGSM 412 (483)
Q Consensus 370 ~~~l~~~~~~l~~~L~~~~~------~~i~~~~----------------------------~~~i~~l~-l~~--~~~~~ 412 (483)
+++..+.+..+++.|.++++ +.+..+. -.|+.... .+. ..+..
T Consensus 425 ~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~ 504 (714)
T PRK15400 425 INGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTM 504 (714)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeCCCCCCccc
Confidence 88888899999999987765 4443211 02221111 111 00100
Q ss_pred hhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 413 KNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 413 ~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
. +......++.+.|+++||.+..... ..+=+.++...|+++++.++++|.++-
T Consensus 505 ~-~~Gipg~~v~~~L~e~gI~~E~~d~---------~~iLfl~s~g~t~~~~~~L~~aL~~f~ 557 (714)
T PRK15400 505 S-DFGIPASIVAKYLDEHGIVVEKTGP---------YNLLFLFSIGIDKTKALSLLRALTDFK 557 (714)
T ss_pred c-ccCCCHHHHHHHHHHcCCEEEecCC---------CeEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 0 0111122344456778998876533 226678888999999999999998763
No 347
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.68 E-value=5.4e-15 Score=148.17 Aligned_cols=285 Identities=13% Similarity=0.080 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHhhhCCC---CEEEe-cccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHh-hh--cCCeEEEecCCCHH
Q 011567 154 DVHLDCEARIAKFLGTP---DSILY-SYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL-YL--SRSTVVYFKHNDMD 226 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e---~~i~~-~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~-~~--s~~~v~~~~~~d~~ 226 (483)
+...+.++.++++++.+ +++++ +||+.++..++..+..++ .+++..+.|++-+... .. ...++..++....+
T Consensus 41 ~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~~-~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 119 (361)
T TIGR01366 41 NLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEKK-SLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPGS 119 (361)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhccccc-ccEEecCHHHHHHHHHHHhhhccCCceEEecCCCC
Confidence 57788999999999973 24454 568999999988876433 3333334444322221 11 11234444322112
Q ss_pred HHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCc
Q 011567 227 SLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDK 306 (483)
Q Consensus 227 ~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~ 306 (483)
.++..+ . ..+++|.+.+.-+.+|.+.|+++| +++||+++++|.++++|... .++ ++
T Consensus 120 ~~~~~~---~-------~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~---------idv--~~ 175 (361)
T TIGR01366 120 APEPQA---D-------PGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGLP---------VDI--AE 175 (361)
T ss_pred CCCCcc---C-------CCCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCCC---------CCH--HH
Confidence 222211 1 137889898998899999999887 58899999999999976431 233 34
Q ss_pred eeEEEccccccccCCCcee--eccHHHHHHHHhcCCc------ee------------ecCC-CcHHHHHHHHHHHHHHhc
Q 011567 307 IDIVTAAMGHALATEGGFC--TGSARVVDHQRLSSSG------YV------------FSAS-LPPYLASAAITAIDVLEE 365 (483)
Q Consensus 307 ~Di~~~s~~K~lg~~GG~i--~~~~~~~~~~~~~~~~------~~------------fs~~-~~p~~~aaa~~al~~l~~ 365 (483)
+|++++|..|++|+.||+. +.+++..+.+.....+ |. .+.+ .+.....+..++++++++
T Consensus 176 ~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~ 255 (361)
T TIGR01366 176 TDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNG 255 (361)
T ss_pred CCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHH
Confidence 7999999999999776643 4477766655421100 10 1112 233334466678888864
Q ss_pred C---cHHHHHHHHHHHHHHHhhccCCCceeec-CC--CCCEEE-EEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeec
Q 011567 366 N---PDLITKLKKNTAILRTGLSDIHGLSIAS-NP--ESPIVF-LILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSK 438 (483)
Q Consensus 366 ~---~~~~~~l~~~~~~l~~~L~~~~~~~i~~-~~--~~~i~~-l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~ 438 (483)
. +...++.+++.+++++.|.+..++.+.. .. .++.+. +.+. .+. ...++.+. |+++||.+....
T Consensus 256 ~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~--~g~------~~~~v~~~-L~~~gI~i~~~~ 326 (361)
T TIGR01366 256 NGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFV--DDI------DAATVAKI-LRANGIVDTEPY 326 (361)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECC--Ccc------CHHHHHHH-HHHCCCeeccCc
Confidence 3 3566888999999999999875554432 11 244322 3332 111 12345554 456699886532
Q ss_pred ccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 439 RSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 439 ~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
.. +. ...+|+++...+|++||++++++|++++++
T Consensus 327 ~~-l~----~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 327 RK-LG----RNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred cc-cC----CCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 11 11 234999999999999999999999998765
No 348
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.68 E-value=1.9e-14 Score=136.53 Aligned_cols=213 Identities=17% Similarity=0.192 Sum_probs=154.7
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHh----HhhhcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~----g~~~s~~~v~~~~~~d~~~Le 229 (483)
+....||++|+.+=|--.++.++||.+|+..++..+++.||.|+....-++.... .++..|.++..++.+|++.++
T Consensus 62 PT~~vlE~RiAaLEGG~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~ 141 (426)
T COG2873 62 PTTDVLEERIAALEGGVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFE 141 (426)
T ss_pred chHHHHHHHHHHhhcchhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHH
Confidence 4567899999999998889999999999999999999999999887776665543 345668899999999999999
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
+.+++ ++++|.+|.+-|+.+.+.+++.|.++|+++|+.+|+|.+.+...+- .-+. ...||
T Consensus 142 ~aI~~----------nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl~-------rP~~---hGADI 201 (426)
T COG2873 142 AAIDE----------NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYLC-------RPIE---HGADI 201 (426)
T ss_pred HHhCc----------ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcceec-------chhh---cCCCE
Confidence 88866 4899999999999999999999999999999999999987643332 1122 33499
Q ss_pred EEcccccccc----CCCceee--ccHHHHH--HH------HhcCCcee---------------------ecCCCcHHHHH
Q 011567 310 VTAAMGHALA----TEGGFCT--GSARVVD--HQ------RLSSSGYV---------------------FSASLPPYLAS 354 (483)
Q Consensus 310 ~~~s~~K~lg----~~GG~i~--~~~~~~~--~~------~~~~~~~~---------------------fs~~~~p~~~a 354 (483)
++.|++|.+| +.||.++ |+-++.. .+ ...-++.. ++++++|+.+-
T Consensus 202 VvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAf 281 (426)
T COG2873 202 VVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAF 281 (426)
T ss_pred EEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHH
Confidence 9999999997 3457664 2212210 00 00011111 22334555544
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCC
Q 011567 355 AAITAIDVLEENPDLITKLKKNTAILRTGLSDIHG 389 (483)
Q Consensus 355 aa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~ 389 (483)
..+..++-+ .-+.++.-+|+..+.+.|++.|.
T Consensus 282 l~lqGlETL---~LRmerH~~NA~~vA~~L~~Hpk 313 (426)
T COG2873 282 LLLQGLETL---SLRMERHCENALKVAEFLENHPK 313 (426)
T ss_pred HHHhchhhh---HHHHHHHHHhHHHHHHHHhcCCC
Confidence 444444333 23567777888888888887664
No 349
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.68 E-value=1.5e-14 Score=152.75 Aligned_cols=311 Identities=17% Similarity=0.144 Sum_probs=190.2
Q ss_pred hHHHHHHHHHHHhhhCCCCEEEecccH-HHHHhhhhhhccCCcEEEEcCCchhHHHhH-hhhcCCeEEEecCC-------
Q 011567 153 IDVHLDCEARIAKFLGTPDSILYSYGL-STMFSAIPCFCKKGDLIVADEGVHWGIQNG-LYLSRSTVVYFKHN------- 223 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e~~i~~~sG~-~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g-~~~s~~~v~~~~~~------- 223 (483)
..+..+.++..|+.+|.+++.+..+|+ .+|.+++.+.+++||.|++++.+|-|+..| +.++|+..+++...
T Consensus 173 eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi~ 252 (720)
T PRK13578 173 EGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFI 252 (720)
T ss_pred ChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccCCc
Confidence 347789999999999999998886665 778899999999999999999999999996 99999988776421
Q ss_pred ---C-----HHHHHHHHHHhhhhhhhccCc-cEEEEEecccCCCCCccChHHHHHH-HHHcCcEEEEeCccccc-cccCC
Q 011567 224 ---D-----MDSLRNTLERVTADNKRAKKL-RRYIVVEAVYQNSGQIAPLDELIRL-KEKYRFRVFLDESNSFG-VLGRS 292 (483)
Q Consensus 224 ---d-----~~~Le~~l~~~~~~~~~~~~~-~~~iv~e~v~~~~G~i~~L~~l~~l-~~k~~~~li~DEa~s~g-~lg~~ 292 (483)
+ .+.+++.+++...+..+.+++ +.+|++.|.|- |.+.++++|+++ |++++ .|++||+|+.- .+.+-
T Consensus 253 g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYd--G~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p~ 329 (720)
T PRK13578 253 GGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYD--GTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIPM 329 (720)
T ss_pred CCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCc--ceeecHHHHHHHhhccCC-cEEEeCcchhhhccCcc
Confidence 2 345888887652211111222 56778877774 999999999998 78888 99999999642 12221
Q ss_pred CCccccc-cCCCC-CceeEEEcccccccc--CCCceeeccHHH-------HHHHHhcCCceee-cCCCcHHHHHHHHHHH
Q 011567 293 GRGLTEH-CGVPV-DKIDIVTAAMGHALA--TEGGFCTGSARV-------VDHQRLSSSGYVF-SASLPPYLASAAITAI 360 (483)
Q Consensus 293 G~g~~~~-~~v~~-~~~Di~~~s~~K~lg--~~GG~i~~~~~~-------~~~~~~~~~~~~f-s~~~~p~~~aaa~~al 360 (483)
-+++... ....+ +..++++-|.+|.++ +.+.++-.+... +++-+.+..-..+ |+|.+-..+|..-.+-
T Consensus 330 ~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTSPsY~LmASLDva~ 409 (720)
T PRK13578 330 MADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTSPFYPLFAALDVNA 409 (720)
T ss_pred cccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 1122111 11112 112389999999997 334554222211 1121111111123 3343333444444445
Q ss_pred HHHhc--CcHHHHHHHHHHHHHHHhh-ccCCCceeecCC----------------------------C------------
Q 011567 361 DVLEE--NPDLITKLKKNTAILRTGL-SDIHGLSIASNP----------------------------E------------ 397 (483)
Q Consensus 361 ~~l~~--~~~~~~~l~~~~~~l~~~L-~~~~~~~i~~~~----------------------------~------------ 397 (483)
.+++. ..++++...+.+..+|+.| +.++++.+..+. .
T Consensus 410 ~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~ 489 (720)
T PRK13578 410 KMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQY 489 (720)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccccCcccccccccccccc
Confidence 55553 4567888888888898888 555555443110 0
Q ss_pred --CCEEE-EEecCC---CCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHH
Q 011567 398 --SPIVF-LILEKS---TGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESL 471 (483)
Q Consensus 398 --~~i~~-l~l~~~---~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l 471 (483)
.|+.. +....- .+......--...+.+ .|.++||.+...... .+-+.++...|++++++++++|
T Consensus 490 ~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~-~L~e~gI~~E~~d~~---------~vL~l~s~g~t~~~~~~Lv~aL 559 (720)
T PRK13578 490 FVDPCKLLLTTPGIDAETGEYEDFGIPATILAN-YLRENGIVPEKCDLN---------SILFLLTPAEDMAKLQQLVAML 559 (720)
T ss_pred ccCCceEEEEcCCcCcccccccccCccHHHHHH-HHHHcCCEEEecCCC---------eEEEEeCCCCCHHHHHHHHHHH
Confidence 12111 111100 0100000000223444 565559988765332 2557778889999999999999
Q ss_pred HHHHH
Q 011567 472 KRISA 476 (483)
Q Consensus 472 ~~~~~ 476 (483)
.++-+
T Consensus 560 ~~f~~ 564 (720)
T PRK13578 560 ARFEK 564 (720)
T ss_pred HHHHH
Confidence 87743
No 350
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.68 E-value=1.6e-14 Score=144.74 Aligned_cols=244 Identities=19% Similarity=0.242 Sum_probs=163.3
Q ss_pred HHHHHHHHHHHhhhCCC---------CEEEecccHHHHHhhhhhhc----------c----CCcEEEEcCCchhHHHhHh
Q 011567 154 DVHLDCEARIAKFLGTP---------DSILYSYGLSTMFSAIPCFC----------K----KGDLIVADEGVHWGIQNGL 210 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e---------~~i~~~sG~~a~~~ai~~~~----------~----~gdiI~~~~~~h~s~~~g~ 210 (483)
....++-+.+++++|.+ ..++.++|+++|..++.+.. + +.-+|++.+..|+|+.+++
T Consensus 79 ~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa 158 (373)
T PF00282_consen 79 EIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAA 158 (373)
T ss_dssp HHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHH
T ss_pred cchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhc
Confidence 45566667777888865 36788999999987764331 1 2247888999999999999
Q ss_pred hhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccc
Q 011567 211 YLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNS 285 (483)
Q Consensus 211 ~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s 285 (483)
...|..++.++.+ |+++|++.+++...+ +....+|+...-...+|.+.|+++|+++|++|++|+++|.+++
T Consensus 159 ~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~----g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~g 234 (373)
T PF00282_consen 159 RILGLGVRKIPTDEDGRMDIEALEKALEKDIAN----GKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYG 234 (373)
T ss_dssp HHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHT----TEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTG
T ss_pred ceeeeEEEEecCCcchhhhHHHhhhhhcccccc----cccceeeeccCCCcccccccCHHHHhhhccccceeeeeccccc
Confidence 9999888877654 688999998775543 1123355555556678999999999999999999999999998
Q ss_pred ccc-ccCCCCccccccCCCCCceeEEEccccccccCC---CceeeccHHHHHHHHhcCCceee-----------------
Q 011567 286 FGV-LGRSGRGLTEHCGVPVDKIDIVTAAMGHALATE---GGFCTGSARVVDHQRLSSSGYVF----------------- 344 (483)
Q Consensus 286 ~g~-lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~---GG~i~~~~~~~~~~~~~~~~~~f----------------- 344 (483)
+.. +-+..+.. ..++ +.+|-++.+.+|.++.+ |-+++.++............|.+
T Consensus 235 g~~~~~~~~~~~--~~gi--~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl 310 (373)
T PF00282_consen 235 GSALLSPEYRHL--LFGI--ERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTL 310 (373)
T ss_dssp GGGGGHCTTGGG--GTTG--GGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSS
T ss_pred cccccccccccc--cccc--ccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccccccc
Confidence 633 22322221 2344 56788899999999833 33445555544332111111111
Q ss_pred cCCCcHHHHHHHHHHHHHHh--cCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEec
Q 011567 345 SASLPPYLASAAITAIDVLE--ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILE 406 (483)
Q Consensus 345 s~~~~p~~~aaa~~al~~l~--~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~ 406 (483)
..+- ...+..+..+++.+- ...+.+++..+++++|.+.|++.+++++..++..++++++++
T Consensus 311 ~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~k 373 (373)
T PF00282_consen 311 QGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRYK 373 (373)
T ss_dssp SSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEES
T ss_pred cccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEeC
Confidence 1121 334444445555443 224678888899999999999998899988889999999873
No 351
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.67 E-value=1.1e-15 Score=136.11 Aligned_cols=160 Identities=21% Similarity=0.288 Sum_probs=123.5
Q ss_pred HHHHHHHHHhhh--CCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHH-hHhhhcCCeEEEecCCCHH----HH
Q 011567 156 HLDCEARIAKFL--GTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ-NGLYLSRSTVVYFKHNDMD----SL 228 (483)
Q Consensus 156 ~~~l~~~La~~~--g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~-~g~~~s~~~v~~~~~~d~~----~L 228 (483)
+.++++.+++++ +.+.++++++|++|+..+++++.++++.|++....|.+.. ..+...+.++..++.++.. ++
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~ 81 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDV 81 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhh
Confidence 468999999999 8888999999999999999999888898888888887777 7778889998888765321 11
Q ss_pred HHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCcee
Q 011567 229 RNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKID 308 (483)
Q Consensus 229 e~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~D 308 (483)
+.+.+.. ...+++++++++.++++|...|+++|+++|+++|+++|+|++++.+..+..+ .+.....+|
T Consensus 82 ~~~~~~~------~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~------~~~~~~~~d 149 (170)
T cd01494 82 AILEELK------AKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPG------VLIPEGGAD 149 (170)
T ss_pred hhhhhcc------ccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccc------cccccccCC
Confidence 1211111 1125789999999999999999999999999999999999999877654211 122224569
Q ss_pred EEEccccccccCC-Cceeec
Q 011567 309 IVTAAMGHALATE-GGFCTG 327 (483)
Q Consensus 309 i~~~s~~K~lg~~-GG~i~~ 327 (483)
+++.|++|.+++. +|+++.
T Consensus 150 ~~~~s~~K~~~~~~~G~l~~ 169 (170)
T cd01494 150 VVTFSLHKNLGGEGGGVVIV 169 (170)
T ss_pred EEEEEcccccCCCceEEEEe
Confidence 9999999999854 477764
No 352
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.67 E-value=4.7e-16 Score=149.84 Aligned_cols=258 Identities=18% Similarity=0.231 Sum_probs=170.2
Q ss_pred EeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccC
Q 011567 113 NFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKK 192 (483)
Q Consensus 113 d~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~ 192 (483)
||.|-+ ++|++.+++.++.. |.. .||..+...+|++++++++|.+.++++.+|+.||..+++++++|
T Consensus 1 Df~SD~-----~~~~m~~a~~~a~~-------gd~-~Yg~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~~ 67 (290)
T PF01212_consen 1 DFRSDT-----PTPAMLEAMAAANV-------GDD-AYGEDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLRP 67 (290)
T ss_dssp EES-SS-----S-HHEEHHHHHTTS-------B-C-CTTSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHHT
T ss_pred CCCccC-----CCHHHHHHHHcccc-------CCc-ccCCChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHhc
Confidence 555544 56888888844332 122 48888999999999999999999999999999999999999999
Q ss_pred CcEEEEcCCchhHHHh--Hh-hhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCC-CCCccC
Q 011567 193 GDLIVADEGVHWGIQN--GL-YLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQN-SGQIAP 263 (483)
Q Consensus 193 gdiI~~~~~~h~s~~~--g~-~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~-~G~i~~ 263 (483)
++.|++....|..... +. .++|.+++.++.. |+++|++.++..... ..++++|.+|...+. +|.+.+
T Consensus 68 ~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h----~~~~~~v~le~t~~~~GG~~~s 143 (290)
T PF01212_consen 68 GESVICADTAHIHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAH----HPQPAVVSLENTTELAGGTVYS 143 (290)
T ss_dssp TEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGT----SGGEEEEEEESSBTTTTSB---
T ss_pred CCceeccccceeeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhcccc----CCCccEEEEEecCcCCCCeeCC
Confidence 9999999999876543 33 5688888877643 689999999875431 114778888876654 577776
Q ss_pred ---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccC-CCceeeccHHHHHHHHh--
Q 011567 264 ---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT-EGGFCTGSARVVDHQRL-- 337 (483)
Q Consensus 264 ---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~-~GG~i~~~~~~~~~~~~-- 337 (483)
|++|.++|++||+.+++|.+.-+-.....|..+.+.. ..+|++..|++|.+|. .|++++++++.++..+.
T Consensus 144 ~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~----~~~D~v~~~~tK~~g~~~Gavl~~~~~~i~~~~~~~ 219 (290)
T PF01212_consen 144 LEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIA----AGADSVSFGGTKNGGAPGGAVLAGNKEFIAKARRQR 219 (290)
T ss_dssp HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH----TTSSEEEEETTSTT-SSSEEEEEESHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh----hhCCEEEEEEEcccccccceEEEechHHHHHHHHHH
Confidence 7888999999999999999852211111112222333 3458999999999985 56788999986654321
Q ss_pred -cCCceeecCCCcHHHHH---HHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecC
Q 011567 338 -SSSGYVFSASLPPYLAS---AAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASN 395 (483)
Q Consensus 338 -~~~~~~fs~~~~p~~~a---aa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~ 395 (483)
...+-....+ +.++ -...++..++.......+..++++.+.+.|+.+ +..+..+
T Consensus 220 k~~gg~~~~~G---~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~-~~~~~~~ 277 (290)
T PF01212_consen 220 KRLGGGMRQAG---VLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEAL-GGVLPRP 277 (290)
T ss_dssp HHHTHHHHHTT---HHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEE-CEEEETT
T ss_pred HHhccCeeecc---eeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHC-CCcccCC
Confidence 1111111111 1122 011233334444456777788899999999887 5444433
No 353
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.67 E-value=3.4e-14 Score=149.81 Aligned_cols=303 Identities=16% Similarity=0.162 Sum_probs=191.2
Q ss_pred hHHHHHHHHHHHhhhCCCCEEEecccH-HHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC--------
Q 011567 153 IDVHLDCEARIAKFLGTPDSILYSYGL-STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------- 223 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e~~i~~~sG~-~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~-------- 223 (483)
..+..+.++..|+.+|.+++.+..+|+ .+|.+++.+.+++||.|++++.+|-|+..++.++|+..+++...
T Consensus 194 ~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g 273 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILG 273 (713)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCCcC
Confidence 347789999999999999999887775 77889999999999999999999999999999999988876421
Q ss_pred --CH-----HHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEE-EEeCcccccc-ccCCCC
Q 011567 224 --DM-----DSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRV-FLDESNSFGV-LGRSGR 294 (483)
Q Consensus 224 --d~-----~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~l-i~DEa~s~g~-lg~~G~ 294 (483)
+. +.+++.+++.... ++++++|++.|.|- |.+.++++|.++| |+.+ ++||+|+.-. +.+--+
T Consensus 274 ~I~~~~~~~e~I~~~i~~~p~~----~~p~~vvit~pTYd--Gi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~ 344 (713)
T PRK15399 274 GIPRREFTRDSIEEKVAATTQA----QWPVHAVITNSTYD--GLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQ 344 (713)
T ss_pred CCChhhccHHHHHHHHHhCCCc----CCceEEEEECCCCC--ceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcccC
Confidence 23 7788888765421 22357888888764 9999999999999 5666 6999996421 221011
Q ss_pred ccccccCC-CCCceeEEEcccccccc--CCCceeeccHHHHHHHHhc-CCceeecCCCcHHHHHHHHHHHHHHhc--CcH
Q 011567 295 GLTEHCGV-PVDKIDIVTAAMGHALA--TEGGFCTGSARVVDHQRLS-SSGYVFSASLPPYLASAAITAIDVLEE--NPD 368 (483)
Q Consensus 295 g~~~~~~v-~~~~~Di~~~s~~K~lg--~~GG~i~~~~~~~~~~~~~-~~~~~fs~~~~p~~~aaa~~al~~l~~--~~~ 368 (483)
+.....+. .++.+.+++.|.||.++ +.+.++-.+.. +++-+.+ ......|+|.+-..+|..-.+.++++. ..+
T Consensus 345 ~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~-vd~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G~~ 423 (713)
T PRK15399 345 GKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGE-YDEETFNEAFMMHTSTSPSYPIVASVETAAAMLRGNPGKR 423 (713)
T ss_pred CcChhhCCCCCCeeeeeeeehhccccccchheeeeecCC-CCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHH
Confidence 11111111 22333444899999997 33455422222 2221111 111222344444455555566666763 456
Q ss_pred HHHHHHHHHHHHHHhhccCCC------ceeecCC----------------------------CCCEEEE-EecC--CCCC
Q 011567 369 LITKLKKNTAILRTGLSDIHG------LSIASNP----------------------------ESPIVFL-ILEK--STGS 411 (483)
Q Consensus 369 ~~~~l~~~~~~l~~~L~~~~~------~~i~~~~----------------------------~~~i~~l-~l~~--~~~~ 411 (483)
++++..+.+..+++.|.++.+ +.+..+. -.|+... ..+. ..+.
T Consensus 424 l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~ 503 (713)
T PRK15399 424 LINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGN 503 (713)
T ss_pred HHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCcccccc
Confidence 788888888889988876544 3332110 0122111 1110 0010
Q ss_pred chhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHH
Q 011567 412 MKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 412 ~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 475 (483)
.+...-....+. +.|+++||.+...... .+=+.++...|++++++++++|.++-
T Consensus 504 ~~~~Gi~g~~l~-~~L~e~gI~~E~~d~~---------~vL~l~s~g~t~~~~~~L~~aL~~f~ 557 (713)
T PRK15399 504 MSEEGIPAALVA-KFLDERGIVVEKTGPY---------NLLFLFSIGIDKTKAMGLLRGLTEFK 557 (713)
T ss_pred cccCCCCHHHHH-HHHHHcCCEEEecCCC---------eEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 001111122344 4567789998765332 25677888999999999999998763
No 354
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.67 E-value=2e-14 Score=146.56 Aligned_cols=269 Identities=18% Similarity=0.186 Sum_probs=181.2
Q ss_pred ChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCC-C--CEEEecccHHHHHhhhhhhcc-----C----
Q 011567 125 HEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT-P--DSILYSYGLSTMFSAIPCFCK-----K---- 192 (483)
Q Consensus 125 ~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~-e--~~i~~~sG~~a~~~ai~~~~~-----~---- 192 (483)
++...+++...+.+- .+ .+..+.++.....++-..++++++. + ...++++|++||..++.+... .
T Consensus 75 ~~~a~~~~~~~~~~n-l~--d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~ 151 (460)
T COG0076 75 PPVAAELLVSALNKN-LG--DPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAES 151 (460)
T ss_pred HHHHHHHHHHHHhhc-CC--CcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcc
Confidence 345555666665552 21 1111224556667777777888876 3 356779999999977654321 0
Q ss_pred -----CcEEEEcCCchhHHHhHhhhcCCeEEEec----C--CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCc
Q 011567 193 -----GDLIVADEGVHWGIQNGLYLSRSTVVYFK----H--NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQI 261 (483)
Q Consensus 193 -----gdiI~~~~~~h~s~~~g~~~s~~~v~~~~----~--~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i 261 (483)
...|+++..+|+|..+++.+.|.....++ + -|++++++.+.+.... . +||....+.++|.+
T Consensus 152 ~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~------g--~vV~~aGtT~~G~i 223 (460)
T COG0076 152 GKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIG------G--VVVGTAGTTDTGSI 223 (460)
T ss_pred cccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhccC------c--eEEEEecCCCCCcc
Confidence 12699999999999999999887554433 1 2889999999876432 1 35555555677999
Q ss_pred cChHHHHHHHHHcCcEEEEeCccccccccC-CCCccccccCCCCCceeEEEcccccccc---CCCceeeccH-HHHHHHH
Q 011567 262 APLDELIRLKEKYRFRVFLDESNSFGVLGR-SGRGLTEHCGVPVDKIDIVTAAMGHALA---TEGGFCTGSA-RVVDHQR 336 (483)
Q Consensus 262 ~~L~~l~~l~~k~~~~li~DEa~s~g~lg~-~G~g~~~~~~v~~~~~Di~~~s~~K~lg---~~GG~i~~~~-~~~~~~~ 336 (483)
.|+++|.++|++|++++++|.+++++.+.- ..++.. .+++ ..+|-++.+++|.+. ++|.+++.++ .+.+.+.
T Consensus 224 Ddi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~-~f~l--~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~ 300 (460)
T COG0076 224 DDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRW-DFGL--EGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILI 300 (460)
T ss_pred CCHHHHHHHHHHcCCcEEEEccccceeecccCccchh-hcCC--CCceEEEECcccccCCCCCceEEEEECHHHhhhhhh
Confidence 999999999999999999999998776521 111110 1444 556888999999996 2345566666 3544443
Q ss_pred hcC--------CceeecCCCcHHHHHHHHHHHHHHh--cCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEec
Q 011567 337 LSS--------SGYVFSASLPPYLASAAITAIDVLE--ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILE 406 (483)
Q Consensus 337 ~~~--------~~~~fs~~~~p~~~aaa~~al~~l~--~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~ 406 (483)
... ..++-..+-+...++++...++.+- ...++.++..++++++.+.|.+.+.+++..++..|++.++++
T Consensus 301 ~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~ 380 (460)
T COG0076 301 FADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLK 380 (460)
T ss_pred cccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcC
Confidence 110 1111112233435666667777773 336788888899999999999986699998889999999985
Q ss_pred C
Q 011567 407 K 407 (483)
Q Consensus 407 ~ 407 (483)
+
T Consensus 381 ~ 381 (460)
T COG0076 381 D 381 (460)
T ss_pred C
Confidence 4
No 355
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.66 E-value=2.6e-14 Score=139.51 Aligned_cols=210 Identities=19% Similarity=0.194 Sum_probs=148.6
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhh----hcCCeEEEecCCCHHHHH
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY----LSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~----~s~~~v~~~~~~d~~~Le 229 (483)
+....+++.++++.|.+.+++|+||.+|+..++..+.+.|+.|++....+..++.-++ ..|.....+ |+++++
T Consensus 77 Pt~~~le~~iaal~ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~v---d~~~~~ 153 (409)
T KOG0053|consen 77 PTRDVLESGIAALEGAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFV---DVDDLK 153 (409)
T ss_pred CchHHHHHHHHHHhCCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeee---chhhHH
Confidence 4467899999999999999999999999999999999999988777666666554433 345555454 455555
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
++.+...+ ++.+|++|.+.|+...+.++++|+++|++||+++++|++.+.+..- .-. +-.+||
T Consensus 154 ~~~~~i~~-------~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~-------~pL---~lGADI 216 (409)
T KOG0053|consen 154 KILKAIKE-------NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQ-------DPL---PLGADI 216 (409)
T ss_pred HHHHhhcc-------CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCccccc-------Chh---hcCCCE
Confidence 54444433 3889999999999999999999999999999999999997654221 111 233599
Q ss_pred EEccccccccC----CCceeecc-HHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Q 011567 310 VTAAMGHALAT----EGGFCTGS-ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 310 ~~~s~~K~lg~----~GG~i~~~-~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
++.|.+|.+|+ .||.++.+ .+....++..... -.+.++|+.|.-....++.+. -++++..+++-.+.+.|
T Consensus 217 V~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~--lg~~~~p~~~~ll~Rglktl~---lRi~~~~ena~~~A~~L 291 (409)
T KOG0053|consen 217 VVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQED--LGWCEDPFDLFLLSRGLKTLH---LRINKHSENALKIALLL 291 (409)
T ss_pred EEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHH--hcCCCCHHHHHHHhcCcchhh---hhHHHHHHHHHHHHHHh
Confidence 99999999973 45777775 6666665433211 123467887776666555442 24455555655555556
Q ss_pred ccCC
Q 011567 385 SDIH 388 (483)
Q Consensus 385 ~~~~ 388 (483)
.+.+
T Consensus 292 e~~~ 295 (409)
T KOG0053|consen 292 EAHP 295 (409)
T ss_pred hhCC
Confidence 5544
No 356
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.64 E-value=1.4e-13 Score=127.34 Aligned_cols=291 Identities=15% Similarity=0.150 Sum_probs=193.8
Q ss_pred HHHHHHHHHHhhhCCCCE---EEecccHHHHHhhhhhhccCCcEEEEcCCchhH--HHhHhhhcCCeEEEecCC-----C
Q 011567 155 VHLDCEARIAKFLGTPDS---ILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWG--IQNGLYLSRSTVVYFKHN-----D 224 (483)
Q Consensus 155 ~~~~l~~~La~~~g~e~~---i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s--~~~g~~~s~~~v~~~~~~-----d 224 (483)
+..++.+-+...|.+... ++-.+|+.+.++|+-.+..+||.|++-..--++ ..+-.+.-|+++..++.. .
T Consensus 51 Im~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~ 130 (385)
T KOG2862|consen 51 IMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVP 130 (385)
T ss_pred HHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCcccCcc
Confidence 445566666666665432 334899999999999898999977654433333 223445567777766432 5
Q ss_pred HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC-hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCC
Q 011567 225 MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP-LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVP 303 (483)
Q Consensus 225 ~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~-L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~ 303 (483)
.+++++.|.++. .++|.+.+.-+.||.+.| ++.+-++|++|+++|++|.+-|.|-.. |.++
T Consensus 131 le~i~~~lsqh~---------p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~---------F~mD 192 (385)
T KOG2862|consen 131 LEEITEKLSQHK---------PKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTE---------FEMD 192 (385)
T ss_pred HHHHHHHHHhcC---------CceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCcc---------ceeh
Confidence 788888887754 456666666677899999 788999999999999999999865321 2333
Q ss_pred CCceeEEEccccccccCCC--ceeeccHHHHHHHHhcCCc---------------------eeecCCCcHHHHHHHHHHH
Q 011567 304 VDKIDIVTAAMGHALATEG--GFCTGSARVVDHQRLSSSG---------------------YVFSASLPPYLASAAITAI 360 (483)
Q Consensus 304 ~~~~Di~~~s~~K~lg~~G--G~i~~~~~~~~~~~~~~~~---------------------~~fs~~~~p~~~aaa~~al 360 (483)
.-.+|+....--|++|.+. +.+..++...+.++.+... -.|-.+.|-....+..++|
T Consensus 193 ewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL 272 (385)
T KOG2862|consen 193 EWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAAL 272 (385)
T ss_pred hhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHH
Confidence 3455887777799998544 4566777777776543210 1222334555566667888
Q ss_pred HHHhcC--cHHHHHHHHHHHHHHHhhccCCCceeecC---CCCCEE-EEEecCCCCCchhhHHHHHHHHHHHHHhCCEEE
Q 011567 361 DVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASN---PESPIV-FLILEKSTGSMKNDLQLLEDIADWALKEDGVFV 434 (483)
Q Consensus 361 ~~l~~~--~~~~~~l~~~~~~l~~~L~~~~~~~i~~~---~~~~i~-~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v 434 (483)
+.+.++ ++.+++.++++++++..|+++ |++.... ...|-+ .+.++. + .| ..+++.+++.+.++.+
T Consensus 273 ~~I~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~~rlptvttv~vp~--g---vD---w~dVv~~~~~~~~vei 343 (385)
T KOG2862|consen 273 ALIAEEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEELRLPTVTTVKVPY--G---VD---WKDVVAYAMSHYVVEI 343 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccceecChhhccCcceeeecCC--C---CC---HHHHHHHHHHhcCEEe
Confidence 877543 578999999999999999986 7764432 123322 222221 1 12 3467888888777777
Q ss_pred EeecccccccCCCCCceEEEccC-CCCHHHHHHHHHHHHHHHHH
Q 011567 435 VTSKRSMLDKCRLPVGIRLFVSA-AHSEADLVKACESLKRISAV 477 (483)
Q Consensus 435 ~~~~~~~~~~~~~~~~lRi~~~~-~~t~edi~~~~~~l~~~~~~ 477 (483)
..+-.++.+ .-+||.+.. .-+.+.|++.++.|+.++.+
T Consensus 344 ~gglg~~~g-----Kv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 344 GGGLGPTVG-----KVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred ccccCCCcc-----cEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 765555442 238996544 44789999999999888765
No 357
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.64 E-value=2.1e-13 Score=135.10 Aligned_cols=345 Identities=15% Similarity=0.142 Sum_probs=208.7
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhh
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF 189 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~ 189 (483)
-+||+-|-.--+- ..++..+|+.. |- ..|+-.+...+|++..++++|.+.++.+.+|..+...+++.+
T Consensus 42 V~IDLrSDTgT~a-pS~~m~aAM~~-----GD------D~Y~gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~ 109 (467)
T TIGR02617 42 VFIDLLTDSGTGA-VTQSMQAAMMR-----GD------EAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVL 109 (467)
T ss_pred eEEECccCCCCCC-CCHHHHHHHHc-----CC------cccccCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhh
Confidence 4789988655443 34666666553 21 134445567899999999999999999999999999999999
Q ss_pred cc-CCcEEEEcCC-------chhHH-HhHhhhcCCeEEEe--------------cCC-CHHHHHHHHHHhhhhhhhccCc
Q 011567 190 CK-KGDLIVADEG-------VHWGI-QNGLYLSRSTVVYF--------------KHN-DMDSLRNTLERVTADNKRAKKL 245 (483)
Q Consensus 190 ~~-~gdiI~~~~~-------~h~s~-~~g~~~s~~~v~~~--------------~~~-d~~~Le~~l~~~~~~~~~~~~~ 245 (483)
++ ||+.+.++.. +|+-. .....++|...+.+ +-+ |++.|++.+++...+ .
T Consensus 110 ~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~------~ 183 (467)
T TIGR02617 110 IKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPN------N 183 (467)
T ss_pred cccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCC------C
Confidence 98 6776665443 33443 23456677665442 112 888999999765322 2
Q ss_pred cEEEEEecccC-CCCCccC---hHHHHHHHHHcCcEEEEeCccccc-cc-------cCCCCcccccc-CCCCCceeEEEc
Q 011567 246 RRYIVVEAVYQ-NSGQIAP---LDELIRLKEKYRFRVFLDESNSFG-VL-------GRSGRGLTEHC-GVPVDKIDIVTA 312 (483)
Q Consensus 246 ~~~iv~e~v~~-~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g-~l-------g~~G~g~~~~~-~v~~~~~Di~~~ 312 (483)
..++.+.-+.| .+|...| +.++.++|++||+.+++|.+.-+- .. +..+....+.. .+ ....|.++.
T Consensus 184 i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~-~~~aDsvt~ 262 (467)
T TIGR02617 184 VPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRET-YKYADMLAM 262 (467)
T ss_pred ceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHh-hccCCEEEE
Confidence 34444443333 3577777 688999999999999999875321 11 22223222211 00 133488899
Q ss_pred ccccccc-CCCceeeccHH----HHHHHHhcCC---ce-eecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHh
Q 011567 313 AMGHALA-TEGGFCTGSAR----VVDHQRLSSS---GY-VFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTG 383 (483)
Q Consensus 313 s~~K~lg-~~GG~i~~~~~----~~~~~~~~~~---~~-~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~ 383 (483)
|++|.+| +.||+++++++ +.+..+.... ++ +|+ ++.---+.|....|+...+ .+.++.--...++|.+.
T Consensus 263 slsKglgApvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYG-Glagrd~ea~a~Gl~e~~~-~~yl~~ri~qv~yl~~~ 340 (467)
T TIGR02617 263 SAKKDAMVPMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYG-GLEGGAMERLAVGLYDGMN-LDWLAYRINQVQYLVNG 340 (467)
T ss_pred EcCCCCCCcccceEEecchhHHHHHHHHHhhcccccCCcCcC-chhHHHHHHHHhhhhhccc-HHHHHHHHHHHHHHHHH
Confidence 9999998 56999988765 2233222211 21 333 2333223322223433322 23555555677899999
Q ss_pred hccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeec------ccccccCCCC--CceEEEc
Q 011567 384 LSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSK------RSMLDKCRLP--VGIRLFV 455 (483)
Q Consensus 384 L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~------~~~~~~~~~~--~~lRi~~ 455 (483)
|.+. |+++.. .++.-+++.-+.-......+.--.+.++.++..+.||-..-.. .|.-.....+ .-+|+++
T Consensus 341 L~~~-Gvpi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~Rlai 418 (467)
T TIGR02617 341 LEEI-GVVCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTI 418 (467)
T ss_pred HHhC-CCcEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeecc
Confidence 9885 999987 6777777753221011111222355666666666777533211 1111111111 2399987
Q ss_pred cC-CCCHHHHHHHHHHHHHHHHH
Q 011567 456 SA-AHSEADLVKACESLKRISAV 477 (483)
Q Consensus 456 ~~-~~t~edi~~~~~~l~~~~~~ 477 (483)
+- ..|.+++|.+++++..+.++
T Consensus 419 pRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 419 PRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred ccccccHhHHHHHHHHHHHHHhh
Confidence 65 56999999999999887654
No 358
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.64 E-value=4.2e-13 Score=140.63 Aligned_cols=363 Identities=13% Similarity=0.132 Sum_probs=222.0
Q ss_pred EEeecC-CCCCCCCChHHHHHHHHHHH--hcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCC--EEEecccHHHHHhhh
Q 011567 112 VNFASA-NYLGLIGHEKLLESCTSALE--KYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPD--SILYSYGLSTMFSAI 186 (483)
Q Consensus 112 id~~s~-~~lG~~~~p~i~~a~~~~l~--~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~--~i~~~sG~~a~~~ai 186 (483)
+.+.+. .|+||...+...-++...+- -+..+.+......++.....++-+++++++|.+. ..++++|+.||..++
T Consensus 78 v~~~~P~ry~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL 157 (608)
T TIGR03811 78 VPWHSAGRYWGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGL 157 (608)
T ss_pred CCCCCccceEEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHH
Confidence 345554 77888765555444443322 2334444444444567788889999999999653 678899999988764
Q ss_pred hhhcc---------C-------------------------------------------------CcEEEEcCCchhHHHh
Q 011567 187 PCFCK---------K-------------------------------------------------GDLIVADEGVHWGIQN 208 (483)
Q Consensus 187 ~~~~~---------~-------------------------------------------------gdiI~~~~~~h~s~~~ 208 (483)
-+... . --.+++++..|+|+.+
T Consensus 158 ~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~K 237 (608)
T TIGR03811 158 WYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLK 237 (608)
T ss_pred HHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHH
Confidence 22110 0 0158889999999999
Q ss_pred HhhhcCC---eEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHH---HHcCc-
Q 011567 209 GLYLSRS---TVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLK---EKYRF- 276 (483)
Q Consensus 209 g~~~s~~---~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~---~k~~~- 276 (483)
++.+.|. .++.++.+ |+++|++.+++...+ ...+.+||...-...+|.+.||++|.++| +++|+
T Consensus 238 Aa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~----g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~ 313 (608)
T TIGR03811 238 AADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAE----KTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIY 313 (608)
T ss_pred HHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhc----CCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCc
Confidence 9998876 46666643 789999999765432 12344455444455679999999999999 67887
Q ss_pred -EEEEeCcccccc---c-cCCC----------------------Cccc-----cccCCCCCceeEEEcccccccc---CC
Q 011567 277 -RVFLDESNSFGV---L-GRSG----------------------RGLT-----EHCGVPVDKIDIVTAAMGHALA---TE 321 (483)
Q Consensus 277 -~li~DEa~s~g~---l-g~~G----------------------~g~~-----~~~~v~~~~~Di~~~s~~K~lg---~~ 321 (483)
++++|.++++.. + ...+ ..+. ..-++ ..+|-++...||++. ++
T Consensus 314 ~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gl--e~ADSItvDpHK~g~~Py~~ 391 (608)
T TIGR03811 314 FYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAI--SEAESVTIDPHKMGYIPYSA 391 (608)
T ss_pred eeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcC--cCceEEEeCcccccccCCCe
Confidence 699999998642 1 1100 0000 01133 457888889999996 44
Q ss_pred CceeeccHHHHHHHHhcCCceee---------------cCCCcHHHHHHHHHHHHHH--h--cCcHHHHHHHHHHHHHHH
Q 011567 322 GGFCTGSARVVDHQRLSSSGYVF---------------SASLPPYLASAAITAIDVL--E--ENPDLITKLKKNTAILRT 382 (483)
Q Consensus 322 GG~i~~~~~~~~~~~~~~~~~~f---------------s~~~~p~~~aaa~~al~~l--~--~~~~~~~~l~~~~~~l~~ 382 (483)
|++++.++.+.+.+... ..|.+ .++-+...+++...+++.+ . ...+++++..++++++.+
T Consensus 392 G~ll~Rd~~~~~~~~~~-a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~ 470 (608)
T TIGR03811 392 GGIVIQDIRMRDVISYF-ATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYD 470 (608)
T ss_pred EEEEEeCHHHHHHHhcC-cchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 66777777766654322 22222 2222334455555677766 2 235688888899999999
Q ss_pred hhccC------CCcee--ecCCCCCEEEEEecCCCCCc-hhhHHHHHHHHHHHH------HhCCEEEEeeccc--cc---
Q 011567 383 GLSDI------HGLSI--ASNPESPIVFLILEKSTGSM-KNDLQLLEDIADWAL------KEDGVFVVTSKRS--ML--- 442 (483)
Q Consensus 383 ~L~~~------~~~~i--~~~~~~~i~~l~l~~~~~~~-~~~~~~~~~i~~~~l------~~~Gv~v~~~~~~--~~--- 442 (483)
.|.+. +.+++ ..+++.+++.+++....... .......+++.+++- .+.-++++...+. ..
T Consensus 471 ~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~~~~g~~~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~ 550 (608)
T TIGR03811 471 FLNNLEFKVGDKEIEVHPLTKPDFNMVDYVFNEKGNDDLVKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDS 550 (608)
T ss_pred HHHhcccccCCCCeeEEecCCCCcceEEEEEecCCCccHHHHHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhh
Confidence 99773 34555 55678889999986443211 223444555555432 1223344332221 00
Q ss_pred -----ccCCC------C-Cc---eEEEc--cCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011567 443 -----DKCRL------P-VG---IRLFV--SAAHSEADLVKACESLKRISAVVLRD 481 (483)
Q Consensus 443 -----~~~~~------~-~~---lRi~~--~~~~t~edi~~~~~~l~~~~~~~~~~ 481 (483)
+.... + .+ ||-++ +....++.++...+.|++++.+.+.+
T Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (608)
T TIGR03811 551 PFAFVNSLGFSDEEWQRAGKVTILRASVMTPYMNDKENFDEYAPKIKAAMQEKLEK 606 (608)
T ss_pred HHHHHHHcCCChhhhccCCceEEEEEEecCcccCChhhHHHHHHHHHHHHHHHHHh
Confidence 00000 0 11 77654 33445588899999999888776653
No 359
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.56 E-value=9.8e-13 Score=144.16 Aligned_cols=318 Identities=14% Similarity=0.101 Sum_probs=199.5
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCC-CCCCCCCcccChHHHHHHHHHHHhhhCCC--CEEEecccHHHHHhhh
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGV-GSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAI 186 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~-g~~~~~~~~g~~~~~~~l~~~La~~~g~e--~~i~~~sG~~a~~~ai 186 (483)
.+.||....+.++-.++.+.+++.+...-|.. +...+-...|..+...+++..+|+++|.+ ++-++.+++++.+.++
T Consensus 103 ~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~ 182 (993)
T PLN02414 103 VFKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMA 182 (993)
T ss_pred ccccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHH
Confidence 36677777676774445555877765543221 11112222455566788899999999976 5778888887777665
Q ss_pred hhhc---cCCcEEEEcCCchhHHHhHhh----hcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCC
Q 011567 187 PCFC---KKGDLIVADEGVHWGIQNGLY----LSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSG 259 (483)
Q Consensus 187 ~~~~---~~gdiI~~~~~~h~s~~~g~~----~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G 259 (483)
.+.. ++++.|++++..|.+....++ ..|.+++.++..+.+ .... .+..++ -...+.+|
T Consensus 183 ~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~-------~~~~-------~v~~vl-vq~P~~~G 247 (993)
T PLN02414 183 MCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFD-------YSSG-------DVCGVL-VQYPATDG 247 (993)
T ss_pred HHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhc-------cccC-------ceEEEE-EecCCCCe
Confidence 4442 245789999999988765553 347788777654321 1111 133333 33445679
Q ss_pred CccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC------ceeeccHHHHH
Q 011567 260 QIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG------GFCTGSARVVD 333 (483)
Q Consensus 260 ~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G------G~i~~~~~~~~ 333 (483)
.+.|+++|.++|+++|+++++ .++..+..+-. -... -.+||++++..|+.++.| ||++.+++...
T Consensus 248 ~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~---~pge-----~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r 318 (993)
T PLN02414 248 EVLDYAEFVKNAHANGVKVVM-ATDLLALTMLK---PPGE-----WGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKR 318 (993)
T ss_pred EEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCC---CHhh-----ccCcEEEECCCccccCCCCCCCCeeEEEECHHHHh
Confidence 999999999999999999999 66665433210 0111 245999999999985444 88888887765
Q ss_pred HHHhc----------CCce-----------eec-CCCcHHHHHHHHHHHH-----HH--hcCcHHHHHHHHHHHHHHHhh
Q 011567 334 HQRLS----------SSGY-----------VFS-ASLPPYLASAAITAID-----VL--EENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 334 ~~~~~----------~~~~-----------~fs-~~~~p~~~aaa~~al~-----~l--~~~~~~~~~l~~~~~~l~~~L 384 (483)
.+... ..+| .|. ++.|.....+..+++. ++ ...+++.+++.+++.+++++|
T Consensus 319 ~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L 398 (993)
T PLN02414 319 LMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGL 398 (993)
T ss_pred hCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 43210 0111 011 1223322222223332 11 122456788899999999999
Q ss_pred ccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHH
Q 011567 385 SDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADL 464 (483)
Q Consensus 385 ~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi 464 (483)
.+. |+++..++....+.+.+.+ ..++.++++ ++||.++... .+.+|+|++..+|++||
T Consensus 399 ~~~-G~~~~~~~~f~~vt~~~~~-----------~~~v~~~L~-~~gI~l~~~~---------~~~lrvs~~e~~T~edI 456 (993)
T PLN02414 399 KKL-GFQVQSLPFFDTVKVKCSD-----------ADAIADAAA-KVGINLRVVD---------ANTVTVSFDETTTLEDV 456 (993)
T ss_pred hhc-CCccCCCCCcCeEEEecCC-----------HHHHHHHHH-HCCCeeEEec---------CCeEEEEeeccCCHHHH
Confidence 874 8887654444455555521 135676654 5699877542 13499999999999999
Q ss_pred HHHHHHHHH
Q 011567 465 VKACESLKR 473 (483)
Q Consensus 465 ~~~~~~l~~ 473 (483)
|+++++|..
T Consensus 457 d~L~~~l~~ 465 (993)
T PLN02414 457 DKLFKVFAG 465 (993)
T ss_pred HHHHHHHcc
Confidence 999999963
No 360
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.55 E-value=1.4e-12 Score=117.80 Aligned_cols=286 Identities=15% Similarity=0.145 Sum_probs=183.1
Q ss_pred HHHHHHHhhhCC-CCEEEecccH-HHHHhhhhhhccCC-cEEEEcCCchhHHHhHhhhcCCeEEEecCC-----CHHHHH
Q 011567 158 DCEARIAKFLGT-PDSILYSYGL-STMFSAIPCFCKKG-DLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLR 229 (483)
Q Consensus 158 ~l~~~La~~~g~-e~~i~~~sG~-~a~~~ai~~~~~~g-diI~~~~~~h~s~~~g~~~s~~~v~~~~~~-----d~~~Le 229 (483)
++...+++--+. .+-+...-|+ +.+.+.|++.+-+| +.|+.-.+.++-+.-.....+..++.++.+ |.+.+.
T Consensus 73 ~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~ 152 (375)
T KOG0633|consen 73 RLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIA 152 (375)
T ss_pred hhhhhcccCCCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHH
Confidence 444455544443 3556666666 66788899999887 344433333333223345567778777755 567777
Q ss_pred HHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHc-CcEEEEeCcccccc-ccCCCCccccccCCCCCce
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKY-RFRVFLDESNSFGV-LGRSGRGLTEHCGVPVDKI 307 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~-~~~li~DEa~s~g~-lg~~G~g~~~~~~v~~~~~ 307 (483)
+.++... ..+++++.+..+++|.+...+.|.++.+.- +.++++||+|--+. .+.+-.+..++-+
T Consensus 153 evl~~ds--------~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpN------ 218 (375)
T KOG0633|consen 153 EVLELDS--------KIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPN------ 218 (375)
T ss_pred HHHhccc--------cceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCc------
Confidence 7775532 267788888888999999988888888765 79999999985321 2222222233322
Q ss_pred eEEEccccccccCCC---ceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHHHHH--HHhcCcHHHHHHHHHHHHHHH
Q 011567 308 DIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAID--VLEENPDLITKLKKNTAILRT 382 (483)
Q Consensus 308 Di~~~s~~K~lg~~G---G~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~--~l~~~~~~~~~l~~~~~~l~~ 382 (483)
-+++.|+||+||..| ||++.+..+.+.+.....+|.-|... -.+|++|+. -.+.....++.+.+...++.+
T Consensus 219 LivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~KaPYNiS~~~----s~~AL~Als~~n~kkme~~rdaiv~er~RL~k 294 (375)
T KOG0633|consen 219 LIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAKAPYNISVAG----SVAALAALSDSNGKKMEDVRDAIVRERERLFK 294 (375)
T ss_pred eeehhhhhhhcCcceeEeecccccHHHHHHHHhccCCccccchh----HHHHHHhcCcccchHHHHHHHHHHHHHHHHHH
Confidence 466789999999877 99999999999887666777555422 222333332 111112356666667777888
Q ss_pred hhccCCCce-eecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCH
Q 011567 383 GLSDIHGLS-IASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSE 461 (483)
Q Consensus 383 ~L~~~~~~~-i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ 461 (483)
.|.+++++. +.+...++++.+++.+. +...+.++..+.+.+.||.++....... ..+.+||++ -|+
T Consensus 295 eLt~v~~~~~~~gg~daNFiLi~v~~~------~n~~akkly~q~at~~gVvVRfrgse~~----c~G~lRitv---Gt~ 361 (375)
T KOG0633|consen 295 ELTEVPFLNDYPGGSDANFILIEVTGG------DNGMAKKLYKQDATKMGVVVRFRGSEEG----CKGYLRITV---GTP 361 (375)
T ss_pred HhhcCccccCCCCcccccEEEEEEcCC------CcHHHHHHHHHHHHhcceEEEEcCCccc----cceeEEEEc---CCc
Confidence 888887654 33455788888888542 2233445566666778999985432110 123499998 477
Q ss_pred HHHHHHHHHHHHH
Q 011567 462 ADLVKACESLKRI 474 (483)
Q Consensus 462 edi~~~~~~l~~~ 474 (483)
|+-+-+++.++++
T Consensus 362 EentvL~k~~K~~ 374 (375)
T KOG0633|consen 362 EENTVLMKCLKQF 374 (375)
T ss_pred ccchHHHHHHHhh
Confidence 8888888887764
No 361
>PLN02452 phosphoserine transaminase
Probab=99.55 E-value=6.3e-12 Score=125.38 Aligned_cols=321 Identities=16% Similarity=0.157 Sum_probs=200.0
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCccc-----ChHHHHHHHHHHHhhhCCC---CEEEe-cccHH
Q 011567 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYG-----TIDVHLDCEARIAKFLGTP---DSILY-SYGLS 180 (483)
Q Consensus 110 ~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g-----~~~~~~~l~~~La~~~g~e---~~i~~-~sG~~ 180 (483)
+.++|+.+ +.- -+++|++++.+.+..|.- ++.+....+ -.++..+.++.|.++++.+ +++++ .+|+.
T Consensus 7 ~~~~f~pG-P~~--lp~~Vl~~~~~~~~~~~~-~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~ 82 (365)
T PLN02452 7 RVFNFSAG-PAT--LPANVLAKAQAELYNWEG-SGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGAST 82 (365)
T ss_pred ceEeeeCC-CCC--CCHHHHHHHHHHHhcccc-cCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHH
Confidence 35677654 111 358888888887765421 111111111 1257789999999999974 34555 77888
Q ss_pred HHHhhhhhhccCCc-EEEEcCCchhH-HHhHhhhcCCeEEEe--cCCC---HHHHHHHHHHhhhhhhhccCccEEEEEec
Q 011567 181 TMFSAIPCFCKKGD-LIVADEGVHWG-IQNGLYLSRSTVVYF--KHND---MDSLRNTLERVTADNKRAKKLRRYIVVEA 253 (483)
Q Consensus 181 a~~~ai~~~~~~gd-iI~~~~~~h~s-~~~g~~~s~~~v~~~--~~~d---~~~Le~~l~~~~~~~~~~~~~~~~iv~e~ 253 (483)
++++++..+..+++ ..++..+.++. ..+-++..|...+.. +..+ +-+++++ +. .. ....|.+.+
T Consensus 83 ~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~-~~-~~-------~~~~v~~~h 153 (365)
T PLN02452 83 QFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW-EL-TP-------DAKFVHICA 153 (365)
T ss_pred HHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc-CC-CC-------CCcEEEECC
Confidence 89999888887776 44455555443 223333334322222 1121 2233332 11 11 245666666
Q ss_pred ccCCCCC-ccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccHHH
Q 011567 254 VYQNSGQ-IAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARV 331 (483)
Q Consensus 254 v~~~~G~-i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~~~ 331 (483)
.-+.+|. +.|++++. ++++++|.++++|... .++ ++.++..+|..|.+|+.| |+++.+++.
T Consensus 154 nETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~p---------idv--~~~~v~~~saqK~lGP~Gl~~v~vr~~~ 216 (365)
T PLN02452 154 NETIHGVEFKDYPDVG------NVPLVADMSSNFLSKP---------VDV--SKYGVIYAGAQKNVGPSGVTIVIIRKDL 216 (365)
T ss_pred CCCCCcEecCcccccC------CCeEEEECCccccCcc---------cCH--HHcCEEEEecccccCCCCeEEEEEcHHH
Confidence 5566788 57887764 2899999999876321 233 333455569999999887 888888888
Q ss_pred HHHHHhcCCce-----------eecCCCcHHHHHHHHHHHHHHhcC---cHHHHHHHHHHHHHHHhhccCCCceee-cC-
Q 011567 332 VDHQRLSSSGY-----------VFSASLPPYLASAAITAIDVLEEN---PDLITKLKKNTAILRTGLSDIHGLSIA-SN- 395 (483)
Q Consensus 332 ~~~~~~~~~~~-----------~fs~~~~p~~~aaa~~al~~l~~~---~~~~~~l~~~~~~l~~~L~~~~~~~i~-~~- 395 (483)
.+........+ .| .++|-....+..++++++++. +.+.++.+++.+++++.|++.+|+... .+
T Consensus 217 l~~~~~~~~~~~~~~~~~~~~s~~-~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~ 295 (365)
T PLN02452 217 IGNARPITPGMLDYKIHAENDSLY-NTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEK 295 (365)
T ss_pred HhhcccCCCchhhHHHHHhcCCcc-CChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCh
Confidence 76543221111 11 234555666777899988753 478889999999999999987776111 11
Q ss_pred -CCCC-EEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHH
Q 011567 396 -PESP-IVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 396 -~~~~-i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
.+++ ++.+.+++. ....++.+. ++++|+...++... + .++|+++-..++.++++++++.+++
T Consensus 296 ~~rs~~~vsF~~~~~--------~~~~~f~~~-~~~~g~~~~~G~r~-~------gg~R~s~yna~~~~~v~~L~~~m~~ 359 (365)
T PLN02452 296 SVRSLMNVPFTLGGS--------ELEAEFVKE-AAKAGMVQLKGHRS-V------GGMRASIYNAMPLAGVEKLVAFMKD 359 (365)
T ss_pred HHhCCeEEEEEcCCc--------hhHHHHHHH-HHHCCCcccCCccc-c------CceEEECcCCCCHHHHHHHHHHHHH
Confidence 1344 666766431 234467765 56679988766442 1 4599999999999999999999998
Q ss_pred HHHH
Q 011567 474 ISAV 477 (483)
Q Consensus 474 ~~~~ 477 (483)
.-++
T Consensus 360 f~~~ 363 (365)
T PLN02452 360 FQAK 363 (365)
T ss_pred HHHh
Confidence 7654
No 362
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.52 E-value=2.3e-12 Score=130.96 Aligned_cols=224 Identities=19% Similarity=0.267 Sum_probs=151.5
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccH-HHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC-C--------
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGL-STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-N-------- 223 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~-~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~-~-------- 223 (483)
....+.++..|+.+|.++..+..+|+ .+|..++.+.+++||.|++|+.+|-|+..|+-++|++.+++.. .
T Consensus 70 G~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~g 149 (557)
T COG1982 70 GPIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIG 149 (557)
T ss_pred ccHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccccccC
Confidence 36789999999999999988886665 7789999999999999999999999999999999998776542 1
Q ss_pred --CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccC
Q 011567 224 --DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCG 301 (483)
Q Consensus 224 --d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~ 301 (483)
+.+.+++.+.+.... .+.+|++.|.|- |.+.++++|++.+.++++|+.+||++..- .+..+.. .+ ..
T Consensus 150 gI~~~~~~~~l~~~~~~------~k~~vitnpTYd--Gv~~n~~~i~~~~~~~~a~v~~deah~~~-~~~~~~l-~~-~~ 218 (557)
T COG1982 150 GIPLETFKEALLAHPDA------EKLAVITNPTYD--GVCYNLRKIVELLHHYGAWVLYDEAHPAH-FDFSPML-PE-SA 218 (557)
T ss_pred CCCHHHHHHHHHhChhh------heeEEEecCccc--eEeecHHHHHHHHhhcCceEEhhhcCccc-ccccccC-cc-hh
Confidence 567787777665432 156788888774 99999999999999999999999998753 2221111 11 11
Q ss_pred CCCCceeEEEcccccccc--CCCceeecc-------HHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHhc--CcHH-
Q 011567 302 VPVDKIDIVTAAMGHALA--TEGGFCTGS-------ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE--NPDL- 369 (483)
Q Consensus 302 v~~~~~Di~~~s~~K~lg--~~GG~i~~~-------~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~--~~~~- 369 (483)
.. ...|+++-|.+|.++ +.+.++-.+ +++-+.+.. .-|+| |.+..-|.+.+-+.... ..++
T Consensus 219 ~~-~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~-----h~STS-PsY~l~ASlD~Ar~~~~~~G~~l~ 291 (557)
T COG1982 219 LN-GGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMM-----HQSTS-PSYPLMASLDVARMQEGNAGRELW 291 (557)
T ss_pred hh-cCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHH-----HccCC-chHHHHHHHHHHHHhhhhhhHHHH
Confidence 11 456999999999997 233333222 223333322 12333 44444334433232222 1233
Q ss_pred ---HHHHHHHHHHHHHhhccCCCceeecC
Q 011567 370 ---ITKLKKNTAILRTGLSDIHGLSIASN 395 (483)
Q Consensus 370 ---~~~l~~~~~~l~~~L~~~~~~~i~~~ 395 (483)
++..-+.++.+++..+++.++++..+
T Consensus 292 ~~~~~~~i~~r~~~~~~~~~~~~~~~~~~ 320 (557)
T COG1982 292 QEVIDEAIDFRKALRRLINEIGFFPVLQP 320 (557)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeeeccc
Confidence 45556667777777777766665543
No 363
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.49 E-value=1.5e-11 Score=135.47 Aligned_cols=278 Identities=13% Similarity=0.059 Sum_probs=177.9
Q ss_pred cccChHHHHHHHHHHHhhhCCC--CEEEecccHHHHHhhhhhhc-cC--CcEEEEcCCchhHHHhHh----hhcCCeEEE
Q 011567 149 FYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAIPCFC-KK--GDLIVADEGVHWGIQNGL----YLSRSTVVY 219 (483)
Q Consensus 149 ~~g~~~~~~~l~~~La~~~g~e--~~i~~~sG~~a~~~ai~~~~-~~--gdiI~~~~~~h~s~~~g~----~~s~~~v~~ 219 (483)
.-|+.+...++++.+++++|.+ ++-++.+++++.+.++.++. ++ ++.|++++..|.+....+ +..|.+++.
T Consensus 116 sQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~ 195 (954)
T PRK05367 116 SQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVV 195 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEE
Confidence 3455567788899999999987 45777777777666655542 22 489999999998876544 456788888
Q ss_pred ecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccc
Q 011567 220 FKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEH 299 (483)
Q Consensus 220 ~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~ 299 (483)
++..+ +++ .+ .+..+++ ...+.+|.+.|+++|.++|+++|+++++|..+....+... ...
T Consensus 196 ~~~~~--d~~-------~~------~~~~vlv-q~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~----pge 255 (954)
T PRK05367 196 GDAAK--ALD-------HD------DVFGVLL-QYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTP----PGE 255 (954)
T ss_pred ecCcc--CCC-------cc------cEEEEEE-ecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCC----hhh
Confidence 87653 121 11 2444433 3446679999999999999999999999986622222210 111
Q ss_pred cCCCCCceeEEEcccccc-----ccCCC-ceeeccHHHHHHHHhcC----------Ccee-----------ecC-CCc--
Q 011567 300 CGVPVDKIDIVTAAMGHA-----LATEG-GFCTGSARVVDHQRLSS----------SGYV-----------FSA-SLP-- 349 (483)
Q Consensus 300 ~~v~~~~~Di~~~s~~K~-----lg~~G-G~i~~~~~~~~~~~~~~----------~~~~-----------fs~-~~~-- 349 (483)
-.+||++++..|+ +|++| ||+..++++.+.+...- .+|. |.. +.|
T Consensus 256 -----~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNic 330 (954)
T PRK05367 256 -----MGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNIC 330 (954)
T ss_pred -----cCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccc
Confidence 2349999999998 55443 88888887766553111 1121 111 111
Q ss_pred -HHHHHHHHHHH--HHHhc--CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHH
Q 011567 350 -PYLASAAITAI--DVLEE--NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIAD 424 (483)
Q Consensus 350 -p~~~aaa~~al--~~l~~--~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~ 424 (483)
.....++.+++ .++.. .+++.++...++.+++++|++ .|+++........+.+.+.. ...++.+
T Consensus 331 t~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~~~~~f~~~~~~~~~----------~~~~i~~ 399 (954)
T PRK05367 331 TAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA-LGLEVVHDSFFDTLTVEVGG----------DAAAVLA 399 (954)
T ss_pred hHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh-cCcccCCCCCCCeEEEeCCC----------CHHHHHH
Confidence 11112222222 22222 245677888899999999977 48877544333344444310 1346777
Q ss_pred HHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHH
Q 011567 425 WALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 472 (483)
Q Consensus 425 ~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 472 (483)
++++ +||.++... ...+|++++...|++||+++++++.
T Consensus 400 ~l~~-~gi~~~~~~---------~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 400 RALA-AGINLRRVD---------DDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred HHHH-CCceecccc---------CCEEEEEecccCCHHHHHHHHHHHc
Confidence 6554 599884321 2459999999999999999999996
No 364
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.48 E-value=1.8e-10 Score=106.42 Aligned_cols=340 Identities=17% Similarity=0.183 Sum_probs=200.0
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHHHh------cCCCCCCCCCcccChHHHHHHHHHHHhhhC---CCCEEEecccHHH
Q 011567 111 VVNFASANYLGLIGHEKLLESCTSALEK------YGVGSCGPRGFYGTIDVHLDCEARIAKFLG---TPDSILYSYGLST 181 (483)
Q Consensus 111 ~id~~s~~~lG~~~~p~i~~a~~~~l~~------~g~g~~~~~~~~g~~~~~~~l~~~La~~~g---~e~~i~~~sG~~a 181 (483)
.+++..+|+.-. |++.+...+...+ ++..-|...+..|...+...|.+.+.+.+| .++-+..++|++.
T Consensus 32 ~imLggGNPa~i---Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs 108 (417)
T COG3977 32 AIMLGGGNPARI---PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQS 108 (417)
T ss_pred ceeeCCCCcccC---hhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccc
Confidence 677777777544 7777776665443 222344444445555666777777777777 4567777777744
Q ss_pred -HHhhhhhhccC-----CcEEEEc-CCchhHHHhHhhhcCCeEE------------Eec-CCCHHHHHHHHHHhhhhhhh
Q 011567 182 -MFSAIPCFCKK-----GDLIVAD-EGVHWGIQNGLYLSRSTVV------------YFK-HNDMDSLRNTLERVTADNKR 241 (483)
Q Consensus 182 -~~~ai~~~~~~-----gdiI~~~-~~~h~s~~~g~~~s~~~v~------------~~~-~~d~~~Le~~l~~~~~~~~~ 241 (483)
..-+...|.++ .+.|+.+ .+.+-.+.++ -+...-.+ .|+ |.|.++|+-. +
T Consensus 109 ~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~-~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~-----e---- 178 (417)
T COG3977 109 AFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADA-GLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHIG-----E---- 178 (417)
T ss_pred hHHHHHHHhcCccCCCcceeEeeccChhhcccccc-ccCccceeeccCCcccccccceeeccCHHHcccc-----c----
Confidence 44555555543 2334433 2222222111 11111111 122 2366655321 1
Q ss_pred ccCccEEEEEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccc
Q 011567 242 AKKLRRYIVVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL 318 (483)
Q Consensus 242 ~~~~~~~iv~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~l 318 (483)
.+.+|++.-..+++|.+.- +.+|-+|+++||+.|+.|.+|+.-.- +--+.+.--+. .+.-|.+.|+||.=
T Consensus 179 ---~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP---~iifsd~~~~w-~~NiilC~SLSK~G 251 (417)
T COG3977 179 ---STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFP---GIIFSDATPLW-NENIILCMSLSKLG 251 (417)
T ss_pred ---ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCC---ceecccccccC-CCCEEEEeehhhcC
Confidence 3778999999999998865 78888899999999999999874211 11111110011 22247778999953
Q ss_pred --cCCCceeeccHHHHHHHHhcCCcee-ecCCCcHHHHHHHHHHHHHHh--cC---cHHHHHHHHHHHHHHHhhccCCCc
Q 011567 319 --ATEGGFCTGSARVVDHQRLSSSGYV-FSASLPPYLASAAITAIDVLE--EN---PDLITKLKKNTAILRTGLSDIHGL 390 (483)
Q Consensus 319 --g~~GG~i~~~~~~~~~~~~~~~~~~-fs~~~~p~~~aaa~~al~~l~--~~---~~~~~~l~~~~~~l~~~L~~~~~~ 390 (483)
|..-|.++++++++..+.....-.. ..+.+-|..++-+++.-+.++ +. +=.+++.+.-...+++.|-+. .+
T Consensus 252 LPG~R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~-~~ 330 (417)
T COG3977 252 LPGSRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEY-RC 330 (417)
T ss_pred CCCcceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcc-ce
Confidence 3445999999999998865432221 122344544444443322222 11 334566666777777777664 45
Q ss_pred eeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecc--cccccCCC--CCceEEEccCCCCHHHHHH
Q 011567 391 SIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKR--SMLDKCRL--PVGIRLFVSAAHSEADLVK 466 (483)
Q Consensus 391 ~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~--~~~~~~~~--~~~lRi~~~~~~t~edi~~ 466 (483)
.+..+.+.-+.|+++++-.- ..+++.++ |+++||++.|+.+ +.+++.-+ ...+|++. .-+++.|++
T Consensus 331 ~iHkpEGAIFlWLWf~dLPI-------tt~~LYq~-LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~--~~~~~~ie~ 400 (417)
T COG3977 331 LIHKPEGAIFLWLWFKDLPI-------TTEELYQR-LKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNY--VPEPEKIEK 400 (417)
T ss_pred eeecCCcceeehhhhccCCC-------CHHHHHHH-HHhCeEEEecccccCCCCCCCCCCccceEEEec--CCCHHHHHH
Confidence 56655556677888754221 13356664 7788999998864 44432211 12388865 468899999
Q ss_pred HHHHHHHHHHHHHhc
Q 011567 467 ACESLKRISAVVLRD 481 (483)
Q Consensus 467 ~~~~l~~~~~~~~~~ 481 (483)
.+.+|.+.+++...+
T Consensus 401 Gva~lae~ve~~yq~ 415 (417)
T COG3977 401 GVAILAEEVERAYQE 415 (417)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999998877543
No 365
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.47 E-value=2.3e-11 Score=121.46 Aligned_cols=287 Identities=16% Similarity=0.126 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHhhhCCC--C-EEEe-cccHHHHHhhhhhhc-cCCcEEEEcCCchhH-HH-hHhhhcCC-eEEEec--CC
Q 011567 154 DVHLDCEARIAKFLGTP--D-SILY-SYGLSTMFSAIPCFC-KKGDLIVADEGVHWG-IQ-NGLYLSRS-TVVYFK--HN 223 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e--~-~i~~-~sG~~a~~~ai~~~~-~~gdiI~~~~~~h~s-~~-~g~~~s~~-~v~~~~--~~ 223 (483)
++..+..+.|.++++.+ . ++++ +||+.++++++..+. ++|+.+++.. .++. .. +.++..|. ++..++ .+
T Consensus 39 ~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~~~g 117 (374)
T TIGR01365 39 EKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEAEYG 117 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcCCCC
Confidence 57788899999999963 2 4444 899999999999887 4787666654 3322 23 55555666 344433 32
Q ss_pred ---CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCcccccc
Q 011567 224 ---DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHC 300 (483)
Q Consensus 224 ---d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~ 300 (483)
|+++++. . ..+ .+.+.-+.+|...|++++.+.+ ++.++|+|.+-++|... +
T Consensus 118 ~~~~~~~ve~-----~---------~~v-~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~---------l 171 (374)
T TIGR01365 118 KLPDLKKVDF-----K---------NDV-VFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQD---------L 171 (374)
T ss_pred CCCCHHHcCC-----C---------CCE-EEecCCCchheecccccccccc--CCCcEEEEccchhcCCC---------C
Confidence 4555541 1 112 3434445569999987666332 58999999998876321 2
Q ss_pred CCCCCceeEEEccccccccCCCc--eeeccHHHHHHHHhcCC-----c--------------ee-ecC-CCcHHHHHHHH
Q 011567 301 GVPVDKIDIVTAAMGHALATEGG--FCTGSARVVDHQRLSSS-----G--------------YV-FSA-SLPPYLASAAI 357 (483)
Q Consensus 301 ~v~~~~~Di~~~s~~K~lg~~GG--~i~~~~~~~~~~~~~~~-----~--------------~~-fs~-~~~p~~~aaa~ 357 (483)
.+ +++|+++++.-|+|++++| +++.+++..+....... . +. ++. +.+-....++.
T Consensus 172 ~~--d~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~ 249 (374)
T TIGR01365 172 DY--HKLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWL 249 (374)
T ss_pred Ch--hHCcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHH
Confidence 33 4689999999999986665 56667766654332110 0 00 111 22333444556
Q ss_pred HHHHHHhc---CcHHHHHHHHHHHHHHHhhccCCC-ceeecC---CCCCE-EEEEecCCCC--Cc-hhhHHHHHHHHHHH
Q 011567 358 TAIDVLEE---NPDLITKLKKNTAILRTGLSDIHG-LSIASN---PESPI-VFLILEKSTG--SM-KNDLQLLEDIADWA 426 (483)
Q Consensus 358 ~al~~l~~---~~~~~~~l~~~~~~l~~~L~~~~~-~~i~~~---~~~~i-~~l~l~~~~~--~~-~~~~~~~~~i~~~~ 426 (483)
.+++.+++ .+...++.+++++.+++.++++ | +.+... ..|+. ..+.+..+.- .. +...+...++.+.
T Consensus 250 ~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~l-g~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~- 327 (374)
T TIGR01365 250 DALKWAESIGGLKPLIARADDNLAVLEAFVAKN-NWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELIST- 327 (374)
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHH-
Confidence 67776654 2578999999999999999997 6 665542 24663 3444432210 00 1111112456654
Q ss_pred HHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 427 LKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 427 l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
++++||.+.++..... +..+||.--..++.+|++.+++.|+=+.+
T Consensus 328 l~~~gi~i~~G~~~~~-----~~~fRIg~~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 328 LEKEGVAYDIGSYRDA-----PSGLRIWCGATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred HHHCCEEEeccccccC-----CCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 5566999987655422 24599988888999999999999986654
No 366
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.40 E-value=1e-10 Score=113.45 Aligned_cols=302 Identities=15% Similarity=0.162 Sum_probs=188.2
Q ss_pred cChHHHHHHHHHHHhhhCCCCEEEe-cccHHH---HHhhhhhhc-----cCCcEEEEcCCchhHHHhHhhhcCCeEEEec
Q 011567 151 GTIDVHLDCEARIAKFLGTPDSILY-SYGLST---MFSAIPCFC-----KKGDLIVADEGVHWGIQNGLYLSRSTVVYFK 221 (483)
Q Consensus 151 g~~~~~~~l~~~La~~~g~e~~i~~-~sG~~a---~~~ai~~~~-----~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~ 221 (483)
|...+..+|+++|++..|.+.+-+. ++|++. -..+|+++- ...++++++++.|+.-.....+.|.+++.++
T Consensus 106 G~l~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~ 185 (496)
T COG1003 106 GYLELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVK 185 (496)
T ss_pred HHHHHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEe
Confidence 4456778999999999999887766 666643 345567663 2457999999999998888999999999998
Q ss_pred CC-----CHHHHHHHHHHhhhhhhhccCccE-EEEEecccCCCCCccC-hHHHHHHHHHcCcEEEEeCccccccccCCCC
Q 011567 222 HN-----DMDSLRNTLERVTADNKRAKKLRR-YIVVEAVYQNSGQIAP-LDELIRLKEKYRFRVFLDESNSFGVLGRSGR 294 (483)
Q Consensus 222 ~~-----d~~~Le~~l~~~~~~~~~~~~~~~-~iv~e~v~~~~G~i~~-L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~ 294 (483)
.+ |+++|++.+.+ .++ +.++.|. .-|.... +.+|+++.+++|..|..|.+.--..+|....
T Consensus 186 ~~~~G~VDlddLk~k~~~----------~~AalMiTnPs--T~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rP 253 (496)
T COG1003 186 CDENGNVDLDDLRAKAED----------NLAALMITNPS--TLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARP 253 (496)
T ss_pred cCCCCCccHHHHHHHhcc----------ceeEEEeccCc--ccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccc
Confidence 65 78999888763 244 4555442 2366544 9999999999999999999976555665333
Q ss_pred ccccccCCCCCceeEEEccccccccC---CC----ceeeccHHHHHHHHh-----cCCceeec--------CC----CcH
Q 011567 295 GLTEHCGVPVDKIDIVTAAMGHALAT---EG----GFCTGSARVVDHQRL-----SSSGYVFS--------AS----LPP 350 (483)
Q Consensus 295 g~~~~~~v~~~~~Di~~~s~~K~lg~---~G----G~i~~~~~~~~~~~~-----~~~~~~fs--------~~----~~p 350 (483)
| .+| .|++-..++|+|+. .| |=+..+..+...+-. ....|... -+ .+.
T Consensus 254 G---d~G-----~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~ 325 (496)
T COG1003 254 G---DMG-----FDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSA 325 (496)
T ss_pred c---ccc-----cceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcc
Confidence 2 123 27777799999962 12 223333333333221 00111100 00 122
Q ss_pred HHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHH
Q 011567 351 YLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALK 428 (483)
Q Consensus 351 ~~~aaa~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~ 428 (483)
....-+.+-+..+-.+ .+.-+...-|+.|+.++|+. .+++.-.+..+..|=.+-+.........-...+++++++.
T Consensus 326 ~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~--~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD 403 (496)
T COG1003 326 SILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG--YYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLD 403 (496)
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh--cCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHh
Confidence 2222222333333211 22233334477889999976 4554323232333322221111111122345688998775
Q ss_pred hCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 011567 429 EDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479 (483)
Q Consensus 429 ~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~ 479 (483)
.|+......+|.+ +++.+-|-|+-.-|++++|++++++.++.++.-
T Consensus 404 -~GfHaPT~~FPli----V~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~ 449 (496)
T COG1003 404 -YGFHAPTMYFPLI----VAGTLMIEPTESESKEELDRFIDAMIAIREEAD 449 (496)
T ss_pred -cCCCCCcccCccc----cccceeecCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6998877777632 245588999999999999999999999887754
No 367
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.39 E-value=3.8e-10 Score=106.94 Aligned_cols=334 Identities=17% Similarity=0.191 Sum_probs=197.3
Q ss_pred EEEeecC-CCCCCCCChHHHHHHHHHHH-hcCCCCCCCCCcccChHHHHHHH----HHHHhhhCCCC-----EEEecccH
Q 011567 111 VVNFASA-NYLGLIGHEKLLESCTSALE-KYGVGSCGPRGFYGTIDVHLDCE----ARIAKFLGTPD-----SILYSYGL 179 (483)
Q Consensus 111 ~id~~s~-~~lG~~~~p~i~~a~~~~l~-~~g~g~~~~~~~~g~~~~~~~l~----~~La~~~g~e~-----~i~~~sG~ 179 (483)
-|++..+ || .+..+.||+-..+. +|.-|..|.|.+.| .+...++| ++--+.|+.+. -+-.-||+
T Consensus 42 gieLIaSENF----ts~aVmeAlGS~ltNKYSEGyPG~RYYGG-ne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGS 116 (477)
T KOG2467|consen 42 GIELIASENF----TSRAVMEALGSCLTNKYSEGYPGARYYGG-NEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGS 116 (477)
T ss_pred ceeEeecccc----hHHHHHHHHhHHhhcccccCCCcccccCc-chHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCC
Confidence 3444443 55 55788999888886 58899999995444 44444432 33344566542 12336999
Q ss_pred HHHHhhhhhhccCCcEEEEcCCchh-HHHhHhh-----hcCCeE------EEecC----CCHHHHHHHHHHhhhhhhhcc
Q 011567 180 STMFSAIPCFCKKGDLIVADEGVHW-GIQNGLY-----LSRSTV------VYFKH----NDMDSLRNTLERVTADNKRAK 243 (483)
Q Consensus 180 ~a~~~ai~~~~~~gdiI~~~~~~h~-s~~~g~~-----~s~~~v------~~~~~----~d~~~Le~~l~~~~~~~~~~~ 243 (483)
-||..+..++.++++.|.--+.-|+ .+-.|.. +|...+ +.+.+ -|.|.||+......
T Consensus 117 PANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~fr------- 189 (477)
T KOG2467|consen 117 PANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFR------- 189 (477)
T ss_pred chhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcC-------
Confidence 9999999999999997763222221 1222332 222222 11221 18888887665543
Q ss_pred CccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cccCCCCCceeEEEccccccc-cCC
Q 011567 244 KLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EHCGVPVDKIDIVTAAMGHAL-ATE 321 (483)
Q Consensus 244 ~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~~~v~~~~~Di~~~s~~K~l-g~~ 321 (483)
.++||.-. . ..-...+.++++++|++.|++|++|-+|-.|.... |.. .-| +..||++.|.+|+| |+.
T Consensus 190 --Pk~iiaG~-S-aY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA---~vipsPF----ey~DiVTTTTHKsLRGPR 258 (477)
T KOG2467|consen 190 --PKLIIAGT-S-AYSRLIDYARFRKIADKVGAYLMADMAHISGLVAA---GVIPSPF----EYCDIVTTTTHKSLRGPR 258 (477)
T ss_pred --CcEEEecc-c-cchhhccHHHHHHHHHhcCceeehhhhhHHHHHhc---ccCCCcc----cccceeeccccccccCCc
Confidence 34555422 1 12345678999999999999999999996665431 222 112 34599999999999 788
Q ss_pred CceeeccHHH------------HH---HHHhcCCceeecCCCcHHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHHHHhh
Q 011567 322 GGFCTGSARV------------VD---HQRLSSSGYVFSASLPPYLASAAITAIDVLEE--NPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 322 GG~i~~~~~~------------~~---~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~--~~~~~~~l~~~~~~l~~~L 384 (483)
||.+.-++-+ .+ .+...-.+-..+ +++.-..++...||+.-.. ..+..+++.+|++.|.+.|
T Consensus 259 g~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQG-GPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l 337 (477)
T KOG2467|consen 259 GAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQG-GPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASAL 337 (477)
T ss_pred ceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccC-CCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9987533311 11 111111111112 2223333333335554432 2467888999999999999
Q ss_pred ccCCCceeecC-CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCC----C
Q 011567 385 SDIHGLSIASN-PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAA----H 459 (483)
Q Consensus 385 ~~~~~~~i~~~-~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~----~ 459 (483)
.+. |+.+.+. .+..++.+.+.+.. -+....+++++ .-+|.+.....|.-.....|+|||+.-++. .
T Consensus 338 ~~~-Gy~lvtgGTDnHlvLvDLr~~G----~dGarvE~vle----~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~ 408 (477)
T KOG2467|consen 338 ISR-GYKLVTGGTDNHLVLVDLRPKG----VDGARVEKVLE----LCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGF 408 (477)
T ss_pred HHc-CceEecCCccceEEEEeccccC----CchHHHHHHHH----HhhhhhcCCcCCCCccccCCCceeccchhhcccCc
Confidence 886 9998754 35566766675432 23333444444 223444333223222222467899965554 4
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 011567 460 SEADLVKACESLKRISAV 477 (483)
Q Consensus 460 t~edi~~~~~~l~~~~~~ 477 (483)
.++|.+++.+.|.++++-
T Consensus 409 ~e~df~~v~~fi~~av~i 426 (477)
T KOG2467|consen 409 GEEDFEKVADFIDRAVKI 426 (477)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 589999999999887653
No 368
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.39 E-value=3.5e-10 Score=111.82 Aligned_cols=309 Identities=15% Similarity=0.113 Sum_probs=188.5
Q ss_pred ChHHHHHHHHHHHhcCC-C----CCCCCCcccChHHHHHHHHHHHhhhCCC--C-EEEe-cccHHHHHhhhhhhccCCc-
Q 011567 125 HEKLLESCTSALEKYGV-G----SCGPRGFYGTIDVHLDCEARIAKFLGTP--D-SILY-SYGLSTMFSAIPCFCKKGD- 194 (483)
Q Consensus 125 ~p~i~~a~~~~l~~~g~-g----~~~~~~~~g~~~~~~~l~~~La~~~g~e--~-~i~~-~sG~~a~~~ai~~~~~~gd- 194 (483)
+++|.+++.+.+..+.. | .-+.|.- --.++..+.++.|.++++.+ . ++++ .+|+.+.+++...+.+++|
T Consensus 16 p~~Vl~~~~~~~~~~~~~g~si~eisHRs~-~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~g~~ 94 (364)
T PRK12462 16 PDTVLEQVRQAVVELPETGLSVLGMSHRSS-WFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRPGAA 94 (364)
T ss_pred CHHHHHHHHHHHhcccccCccccccccccH-HHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCCCCc
Confidence 57888888877766422 1 1111110 01257789999999999974 2 4444 5577888888888888888
Q ss_pred EE-EEcCCchhHHH-hHhhhcCCeEEEecC---CCHHH---HHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHH
Q 011567 195 LI-VADEGVHWGIQ-NGLYLSRSTVVYFKH---NDMDS---LRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDE 266 (483)
Q Consensus 195 iI-~~~~~~h~s~~-~g~~~s~~~v~~~~~---~d~~~---Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~ 266 (483)
++ ++..+.++.-. +-++..| .+..... .+... .++ ++ ..+ ...+|.+.+.-+.+|...|
T Consensus 95 ~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~-~~-~~~-------d~~~v~~t~NETstGv~~~--- 161 (364)
T PRK12462 95 APEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAE-LD-WDA-------RAPFRHYVSNETVEGLQFP--- 161 (364)
T ss_pred EEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHH-hc-cCC-------CCcEEEEccCCCCceEecC---
Confidence 44 45555544322 2222223 2322211 11111 111 11 111 1345655555555688776
Q ss_pred HHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccHHHHHHHHhcC------
Q 011567 267 LIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSS------ 339 (483)
Q Consensus 267 l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~~~~~~~~~~~------ 339 (483)
++.+.++.++|+|-+-++|.. .++.++.|++.++.-|+||++| ++++-+++.++.....-
T Consensus 162 --~~~~~~~~llvvD~sS~~~s~-----------pid~~~~dvi~agsQKnlgP~Gltvvivs~~al~~~~~~~p~~ldy 228 (364)
T PRK12462 162 --DAAGLPDSPLIADMSSDFMSR-----------PFDVEAYGMVYAHAQKNLGPAGVTVAIIRRALLERVPDTLPPMLDF 228 (364)
T ss_pred --cccccCCCeEEEEcCchhhCC-----------CCChHHccEEEeeccccCCCCceEEEEECHHHHhhccccCCchhhH
Confidence 333347999999999876421 1333566999999999999777 56667777665533211
Q ss_pred -----CceeecCCCcHHHHHHHHHHHHHHhcC----cHHHHHHHHHHHHHHHhhccCCCcee---ecCCCCCE-EEEEec
Q 011567 340 -----SGYVFSASLPPYLASAAITAIDVLEEN----PDLITKLKKNTAILRTGLSDIHGLSI---ASNPESPI-VFLILE 406 (483)
Q Consensus 340 -----~~~~fs~~~~p~~~aaa~~al~~l~~~----~~~~~~l~~~~~~l~~~L~~~~~~~i---~~~~~~~i-~~l~l~ 406 (483)
....|. ++|-....++..+++++.++ +.+.++.+++++.+++.+++.+++.. ....+|.+ +.+++.
T Consensus 229 ~~~~~~~s~~n-TPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~ 307 (364)
T PRK12462 229 RTHVEHRSNYN-TPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRFR 307 (364)
T ss_pred HHHHhcCCCCC-CchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEcC
Confidence 111222 34555566777889988543 46888889999999999998865432 22334544 444553
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 407 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
++....++.+.+ +++|+.-..+.. + .+|+|+++-..++.|+++++++.++++-++
T Consensus 308 --------~~~l~~~f~~~a-~~~gl~~lkGhr-~------vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 308 --------QPRLDTLFKEQS-TEAGFCGLSGHR-S------IGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred --------CHHHHHHHHHHH-HHCCCccccCCc-c------cCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 233445667654 556877654432 2 267999999999999999999999887654
No 369
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.38 E-value=3e-10 Score=111.22 Aligned_cols=341 Identities=18% Similarity=0.241 Sum_probs=212.8
Q ss_pred CCeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCE---EEecccHHHH
Q 011567 107 SGKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDS---ILYSYGLSTM 182 (483)
Q Consensus 107 ~G~~~id~~s~-~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~---i~~~sG~~a~ 182 (483)
||..-++.+|+ .|.+ +++..+-+.+.+.++ +.+-+..+.+......+.-.-++.+++.+.. ..+++|++++
T Consensus 77 d~~~~~~~vS~~v~~~---~~~~~~l~~~~~~k~--N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~ 151 (491)
T KOG1383|consen 77 DGNPRLGLASGVVYWG---EPELDKLIMEAYNKF--NPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESG 151 (491)
T ss_pred CCCcccCeeeEEEecC---CcchhhHHHHHHhhc--CccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHH
Confidence 44444555665 4555 455666666667765 4555555666666777777788888875432 2346777886
Q ss_pred Hhhhhhh-----c-c--CCcEEEEcCCchhHHHhHhhhcCCeEEEecCC------CHHHHHHHHHHhhhhhhhccCccEE
Q 011567 183 FSAIPCF-----C-K--KGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKRAKKLRRY 248 (483)
Q Consensus 183 ~~ai~~~-----~-~--~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~------d~~~Le~~l~~~~~~~~~~~~~~~~ 248 (483)
..+-+.. . + ....|++....|.+..+..+.-+.++..++.. |+....+.+.+ +++.
T Consensus 152 l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~e----------Nti~ 221 (491)
T KOG1383|consen 152 LAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDE----------NTIM 221 (491)
T ss_pred HHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeeccccceEecHHHHHHHhcc----------ceEE
Confidence 6553332 1 1 12357788889999999888877777766644 44444444433 4888
Q ss_pred EEEecccCCCCCccChHHHHHHHHH-cCcEEEEeCccccccccCCCCccccccCCCCCceeEEEcccccc-ccCCC-ce-
Q 011567 249 IVVEAVYQNSGQIAPLDELIRLKEK-YRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHA-LATEG-GF- 324 (483)
Q Consensus 249 iv~e~v~~~~G~i~~L~~l~~l~~k-~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~-lg~~G-G~- 324 (483)
++.+-.+.++|.+.|.++|.++.-+ |++.+++|.+-++++.. .|-...+.|+..-..+--+..+-+|- |.+.| ++
T Consensus 222 lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p-~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~v 300 (491)
T KOG1383|consen 222 LVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINP-AGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWV 300 (491)
T ss_pred EEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCcccccc-ccccCccccccCCCCceeEeeccceeeeeecCcEEE
Confidence 9998888899999999999999999 99999999998877652 11111122333212222333344442 23334 44
Q ss_pred eeccHHHHHHHHhcCC--------ceeecCCCcHHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHHHHhhccCCCceeec
Q 011567 325 CTGSARVVDHQRLSSS--------GYVFSASLPPYLASAAITAIDVLEE--NPDLITKLKKNTAILRTGLSDIHGLSIAS 394 (483)
Q Consensus 325 i~~~~~~~~~~~~~~~--------~~~fs~~~~p~~~aaa~~al~~l~~--~~~~~~~l~~~~~~l~~~L~~~~~~~i~~ 394 (483)
+..+++...++-.... ..+-..|-+....+++.+++-.+-+ ..+..++..++...++++++++.++.+.+
T Consensus 301 l~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~g 380 (491)
T KOG1383|consen 301 LYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVG 380 (491)
T ss_pred EEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecC
Confidence 3445555444321111 1111223345555666666644432 24577888899999999999999999886
Q ss_pred CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHH-HHHHHHHHH
Q 011567 395 NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADL-VKACESLKR 473 (483)
Q Consensus 395 ~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi-~~~~~~l~~ 473 (483)
. |.+.+.+.+... -...++.+ .|.+.|..+....+ |+++-+|+...++.+++ |+++.-|++
T Consensus 381 k---p~vs~~~~~s~~------~~i~elsd-~l~~~GW~lnalq~--------P~a~Hi~vt~~~~~~~~A~~~v~Di~~ 442 (491)
T KOG1383|consen 381 K---PLVSFILFGSND------VNIFELSD-LLRKKGWILNALQF--------PAAIHICVTRVHAREDVADRFVADIRK 442 (491)
T ss_pred C---CcEEEEEccCCc------cchhhhhH-HHHhcCcCccccCC--------CCceEEEEEeeeccHHHHHHHHHHHHH
Confidence 6 555555433221 11234555 46667887765433 45788999888888884 678888888
Q ss_pred HHHHHHhc
Q 011567 474 ISAVVLRD 481 (483)
Q Consensus 474 ~~~~~~~~ 481 (483)
++.++...
T Consensus 443 ~~~el~~~ 450 (491)
T KOG1383|consen 443 VVEELKSL 450 (491)
T ss_pred HHHHHHhC
Confidence 88887654
No 370
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.31 E-value=1.6e-09 Score=101.43 Aligned_cols=286 Identities=15% Similarity=0.131 Sum_probs=173.4
Q ss_pred hHHHHHHHHHHHhhhCCC--CEEEecccHHHHHhhhhhhc--cCCcEEEEcCCchhHHH----hH-hhhcCCeEEEecCC
Q 011567 153 IDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAIPCFC--KKGDLIVADEGVHWGIQ----NG-LYLSRSTVVYFKHN 223 (483)
Q Consensus 153 ~~~~~~l~~~La~~~g~e--~~i~~~sG~~a~~~ai~~~~--~~gdiI~~~~~~h~s~~----~g-~~~s~~~v~~~~~~ 223 (483)
.++-..|-.+||-+.|.. ++++..+-+-.+...+-+.. .+|+.|++.+...+.+- .+ +.+.+......-..
T Consensus 75 ~~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~ 154 (407)
T COG3844 75 FDLPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVI 154 (407)
T ss_pred hhchhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccccceeee
Confidence 456678888899999853 45555444444444443332 23565555554443321 11 12222111111123
Q ss_pred CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCC
Q 011567 224 DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVP 303 (483)
Q Consensus 224 d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~ 303 (483)
+++++++.+.. .+++|+..+++-.+|...++.+|-++++++|++++-|=+||.|.+.- .+.
T Consensus 155 ~P~~~~~~~~d----------d~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~---------~Lh 215 (407)
T COG3844 155 APRALEEAITD----------DVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPV---------DLH 215 (407)
T ss_pred ChHHHHHhhcc----------ceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcce---------eec
Confidence 55666665543 38899999999999999999999999999999999999999887642 233
Q ss_pred CCceeEEEcccccccc-CCC--ceeeccHHHHHH--------------------HHhcCCceeecCCCcHHH-HHHHHHH
Q 011567 304 VDKIDIVTAAMGHALA-TEG--GFCTGSARVVDH--------------------QRLSSSGYVFSASLPPYL-ASAAITA 359 (483)
Q Consensus 304 ~~~~Di~~~s~~K~lg-~~G--G~i~~~~~~~~~--------------------~~~~~~~~~fs~~~~p~~-~aaa~~a 359 (483)
..++|+-++|-.|-|+ ++| +++...++..+. .........|-.+.+|+. +++...+
T Consensus 216 ~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~a 295 (407)
T COG3844 216 AAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGA 295 (407)
T ss_pred ccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhh
Confidence 3556999999999994 344 344322222111 111112223433444544 4555567
Q ss_pred HHHHhcC--cHHHHHHHHHHHHHHHhhccCC---CceeecCC----CCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhC
Q 011567 360 IDVLEEN--PDLITKLKKNTAILRTGLSDIH---GLSIASNP----ESPIVFLILEKSTGSMKNDLQLLEDIADWALKED 430 (483)
Q Consensus 360 l~~l~~~--~~~~~~l~~~~~~l~~~L~~~~---~~~i~~~~----~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~ 430 (483)
|++.... .+++++--.+..+|.+.++... ++.+..+. .+.-+.+..+ ...++++. |.++
T Consensus 296 LDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp-----------~~~~V~qa-Li~r 363 (407)
T COG3844 296 LDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP-----------HGYQVMQA-LIDR 363 (407)
T ss_pred hhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC-----------cHHHHHHH-HHHc
Confidence 8887643 3566666667777777665532 34444321 2333333332 23466665 5567
Q ss_pred CEEEEeecccccccCCCCCceEEEc-cCCCCHHHHHHHHHHHHHHHHHH
Q 011567 431 GVFVVTSKRSMLDKCRLPVGIRLFV-SAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 431 Gv~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
||+.... .|.-||+.+ +++.+-+|+-.+++.|.+++.+.
T Consensus 364 GVigD~R---------~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 364 GVIGDFR---------EPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred Ccccccc---------CCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 9876432 134499976 56789999999999999998764
No 371
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.28 E-value=2.9e-10 Score=110.90 Aligned_cols=238 Identities=13% Similarity=0.137 Sum_probs=159.8
Q ss_pred eEEEeecC---CCCCCC-CChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhh
Q 011567 110 EVVNFASA---NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSA 185 (483)
Q Consensus 110 ~~id~~s~---~~lG~~-~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~a 185 (483)
+++|.+.. ..+|=+ -+|+..+++.+.++.+-.- -..+.......-...+.+.++...|.+++.++++.+.|+..+
T Consensus 21 ~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~~v~L-e~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~ 99 (395)
T COG1921 21 RVINAIGTVLMTNLGRSLYSPEAIEAMKEAMRAPVEL-ETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLT 99 (395)
T ss_pred hhhhhhhhheeccCCCccCCHHHHHHHHHHhccccee-eeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHH
Confidence 45555552 344432 4789999999888774210 000000011122236777778888889999999999999999
Q ss_pred hhhhccCCcEEE-----EcCCchhHHHhHhhhcCCeEEEecCC---CHHHHHHHHHHhhhhhhhccCccEEEEEecccCC
Q 011567 186 IPCFCKKGDLIV-----ADEGVHWGIQNGLYLSRSTVVYFKHN---DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQN 257 (483)
Q Consensus 186 i~~~~~~gdiI~-----~~~~~h~s~~~g~~~s~~~v~~~~~~---d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~ 257 (483)
+.++..++.+|+ ++ ++|+.+.+.++++|++++.+... ...+++..+.+... ..+-|..+.|..
T Consensus 100 ~~al~~~~EvVis~g~lV~-gg~~~v~d~~~~aG~~l~EvG~tn~t~~~d~~~AIne~ta--------~llkV~s~~~~f 170 (395)
T COG1921 100 LNALAEGKEVVVSRGELVE-GGAFRVPDIIRLAGAKLVEVGTTNRTHLKDYELAINENTA--------LLLKVHSSNYGF 170 (395)
T ss_pred HhhhccCCeEEEEcccccc-CCCCChhHHHHHcCCEEEEecccCcCCHHHHHHHhccCCe--------eEEEEeeccccc
Confidence 999887666655 33 78999999999999999988654 45667777655332 234444444422
Q ss_pred CCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEcccccccc-CCCceeeccHHHHHHHH
Q 011567 258 SGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA-TEGGFCTGSARVVDHQR 336 (483)
Q Consensus 258 ~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg-~~GG~i~~~~~~~~~~~ 336 (483)
+| ..++++++++|++||+.+|+|.+-+.-+ .+ -..+.+... ..+|++++|-.|.|| +.+|+++|++++++.++
T Consensus 171 ~~-~l~~~~l~~ia~~~~lpvivD~aSg~~v-~~-e~~l~~~la---~GaDLV~~SgdKllgGPqaGii~GkKelI~~lq 244 (395)
T COG1921 171 TG-MLSEEELVEIAHEKGLPVIVDLASGALV-DK-EPDLREALA---LGADLVSFSGDKLLGGPQAGIIVGKKELIEKLQ 244 (395)
T ss_pred cc-cccHHHHHHHHHHcCCCEEEecCCcccc-cc-ccchhHHHh---cCCCEEEEecchhcCCCccceEechHHHHHHHH
Confidence 22 3468889999999999999998754321 11 112222222 345999999999996 66899999999999877
Q ss_pred hcCCceeecCCCcHHHHHHHHHHHHHHhc
Q 011567 337 LSSSGYVFSASLPPYLASAAITAIDVLEE 365 (483)
Q Consensus 337 ~~~~~~~fs~~~~p~~~aaa~~al~~l~~ 365 (483)
....+ +..-..+...++..++|+.+..
T Consensus 245 ~~~l~--Ralrv~K~tla~l~~aLe~y~~ 271 (395)
T COG1921 245 SHPLK--RALRVDKETLAALEAALELYLQ 271 (395)
T ss_pred hhhhh--hhhhcCcHhHHHHHHHHHHHcC
Confidence 65443 3333456777777888887765
No 372
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.23 E-value=3e-09 Score=115.69 Aligned_cols=313 Identities=12% Similarity=0.163 Sum_probs=185.2
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHH---HHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC--CEEEecccHHHHHhh
Q 011567 111 VVNFASANYLGLIGHEKLLESCTSA---LEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSA 185 (483)
Q Consensus 111 ~id~~s~~~lG~~~~p~i~~a~~~~---l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e--~~i~~~sG~~a~~~a 185 (483)
+..|....|.++--+|.|.+.+.+- +..| ....|-..-|+.+...++...+++++|.+ ++-++..++++.+++
T Consensus 65 ~~~fig~G~y~~~~p~~i~r~v~~~p~~~Tay--tPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~ 142 (939)
T TIGR00461 65 FKSYIGMGYYGTILPPVIQRNLLENPGWYTAY--TPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAM 142 (939)
T ss_pred ccccCCCCcCCCcCChHHHHHHHhCchhhhcC--CCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHH
Confidence 3455555566664445555455432 2333 12222234456677788999999999988 557888777766666
Q ss_pred hhhh--c-cCCcEEEEcCCchhHHHhHhh----hcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCC
Q 011567 186 IPCF--C-KKGDLIVADEGVHWGIQNGLY----LSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNS 258 (483)
Q Consensus 186 i~~~--~-~~gdiI~~~~~~h~s~~~g~~----~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~ 258 (483)
+.+. . ++++.|++++..|..+..-++ ..|.+++.+ |+++|++.+ + ++.+++..+ +..
T Consensus 143 ~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~---~~~~l~~~~-----~-------~~~v~~q~P-n~~ 206 (939)
T TIGR00461 143 ALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV---DCSDIKKAV-----D-------VFGCLLQYP-ATD 206 (939)
T ss_pred HHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE---cHHHHhhcC-----C-------EEEEEEECC-CCC
Confidence 5553 2 334789999999988664443 567777776 455554433 1 445544333 335
Q ss_pred CCccChHHHHHHHHHcCcEEEEeCcc-ccccccCCCCccccccCCCCCceeEEEcccccccc-------CCCceeeccHH
Q 011567 259 GQIAPLDELIRLKEKYRFRVFLDESN-SFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA-------TEGGFCTGSAR 330 (483)
Q Consensus 259 G~i~~L~~l~~l~~k~~~~li~DEa~-s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg-------~~GG~i~~~~~ 330 (483)
|.+.++++|.+++++.|.+++++--. +.+.+-+ ...+| +||+++ .+|.|| +.+||++.+++
T Consensus 207 G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~-----Pge~G-----aDi~vg-~~q~fg~p~g~GGP~aG~~a~~~~ 275 (939)
T TIGR00461 207 GSILDYKQLIDALHSHKSLVSVAADLMALTLLTP-----PGHYG-----ADIVLG-SSQRFGVPMGYGGPHAAFFAVKDE 275 (939)
T ss_pred eEEecHHHHHHHHHHcCCEEEEEechHHhCCcCC-----HHHcC-----CcEEee-CCCccCCCCCCCCCceeeeeecHh
Confidence 99999999999999999999997543 3332221 11223 488864 566665 22378887777
Q ss_pred HHHHHHhc----------CCceeec-----------CCCcHHHHHHHH----HH--HHHHh-c-CcHHHHHHHHHHHHHH
Q 011567 331 VVDHQRLS----------SSGYVFS-----------ASLPPYLASAAI----TA--IDVLE-E-NPDLITKLKKNTAILR 381 (483)
Q Consensus 331 ~~~~~~~~----------~~~~~fs-----------~~~~p~~~aaa~----~a--l~~l~-~-~~~~~~~l~~~~~~l~ 381 (483)
+...+... ..+|..+ -..+....+.++ ++ +.++- + ..++-++...++.++.
T Consensus 276 l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~ 355 (939)
T TIGR00461 276 YNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILA 355 (939)
T ss_pred hHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Confidence 66554210 1122221 011111111111 12 22221 1 1345566777888999
Q ss_pred HhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCH
Q 011567 382 TGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSE 461 (483)
Q Consensus 382 ~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ 461 (483)
+.|.+ .|+++..++-...+.+.+.. ....++.+++++ +||.++... ...+++|++-.+|+
T Consensus 356 ~~L~~-~G~~~~~~~fF~~~~v~~~~---------~~~~~i~~~~~~-~gi~l~~~~---------~~~i~~s~~E~~t~ 415 (939)
T TIGR00461 356 NGLEN-DPHELINKTWFDTLTVKVGN---------GISSELLKAAEE-FNINLRAVD---------TTTVGIALDETTTK 415 (939)
T ss_pred HHHHh-CCCcccCCCccceEEEEeCC---------CCHHHHHHHHHH-CCCeeeecC---------CCEEEEEeecCCCH
Confidence 99988 59887644222233444411 013457776555 599976521 13499999999999
Q ss_pred HHHHHHHHHHH
Q 011567 462 ADLVKACESLK 472 (483)
Q Consensus 462 edi~~~~~~l~ 472 (483)
+||+.+++++.
T Consensus 416 ~di~~l~~~~~ 426 (939)
T TIGR00461 416 ADVENLLKVFD 426 (939)
T ss_pred HHHHHHHHHhc
Confidence 99999999994
No 373
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.20 E-value=4.1e-09 Score=102.01 Aligned_cols=306 Identities=16% Similarity=0.204 Sum_probs=176.9
Q ss_pred HHHHHHHHhhhCC---CCEEEecccHHHHHhhhhhhc--------------cCCcEEEEcCCchhHHHhHhhhcC---Ce
Q 011567 157 LDCEARIAKFLGT---PDSILYSYGLSTMFSAIPCFC--------------KKGDLIVADEGVHWGIQNGLYLSR---ST 216 (483)
Q Consensus 157 ~~l~~~La~~~g~---e~~i~~~sG~~a~~~ai~~~~--------------~~gdiI~~~~~~h~s~~~g~~~s~---~~ 216 (483)
.++-.++.+..|. .+.|+..+|+-+|.-++.+.. -|.-++++++..|+|+.++....| ..
T Consensus 144 ~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~ 223 (510)
T KOG0629|consen 144 EEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDH 223 (510)
T ss_pred HHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCce
Confidence 3444455555553 367888999888776654321 144567889999999999998877 45
Q ss_pred EEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccc-c
Q 011567 217 VVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVL-G 290 (483)
Q Consensus 217 v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~l-g 290 (483)
++.++.+ ++++||+.+.+...+ .....+|-+..-...-|...||+.|+++|++|++|+++|.+.++|.+ .
T Consensus 224 c~~v~t~e~Gkm~~~dLe~kile~k~k----g~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS 299 (510)
T KOG0629|consen 224 CIKVKTDERGKMIPDDLEKKILEAKAK----GGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMS 299 (510)
T ss_pred eEEecccccCccchHHHHHHHHHHHhc----CCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccC
Confidence 6666654 789999888765432 11245555555455569999999999999999999999999988764 4
Q ss_pred CCCCccccccCCCCCceeEEEccccccccC---CCceeeccHHHHHHHHhcCCceeec----------CCCcHHHHHHHH
Q 011567 291 RSGRGLTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSSGYVFS----------ASLPPYLASAAI 357 (483)
Q Consensus 291 ~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~---~GG~i~~~~~~~~~~~~~~~~~~fs----------~~~~p~~~aaa~ 357 (483)
+..|. ..-|+. .+|-++-+-+|.+|. ++.++...+-+..........|.|. ++.-...|.--.
T Consensus 300 ~k~R~--kl~Gie--ra~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~ 375 (510)
T KOG0629|consen 300 RKHRH--KLTGIE--RANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHV 375 (510)
T ss_pred hhhHh--hccCcc--ccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccc
Confidence 33332 223553 347777889999982 2333333233333332222233332 211111121000
Q ss_pred HHHHHH---h-----cCcHHHHHHHHHHHHHHHhhccCCCceeecC--CCCCEEEEEecCC-----CCCchhh---HHHH
Q 011567 358 TAIDVL---E-----ENPDLITKLKKNTAILRTGLSDIHGLSIASN--PESPIVFLILEKS-----TGSMKND---LQLL 419 (483)
Q Consensus 358 ~al~~l---~-----~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~--~~~~i~~l~l~~~-----~~~~~~~---~~~~ 419 (483)
-..+.. + ..++.+++..+++++|.+.|++..++...-. +..--++++.-++ ....+.+ ...+
T Consensus 376 D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVa 455 (510)
T KOG0629|consen 376 DVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVA 455 (510)
T ss_pred cHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccchhhhHHHhhC
Confidence 111111 1 1246788999999999999998777654422 2322233333221 1111111 1223
Q ss_pred HHHHHHHHHhCCEEEEeecccccccCCCCCceEEEc-cCCCCHHHHHHHHHHHHHHH
Q 011567 420 EDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFV-SAAHSEADLVKACESLKRIS 475 (483)
Q Consensus 420 ~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~ 475 (483)
-.+-.++++++-..+...+.... +.=+|+.+ +...+.+|+|.+++.|..+-
T Consensus 456 PkIK~~Mm~~Gt~Mi~YqPl~~~-----~nffr~v~sn~a~~~ad~dflldEIerlg 507 (510)
T KOG0629|consen 456 PKIKERMMKKGTTMIGYQPLGDK-----PNFFRMVISNPALTEADLDFLLDEIERLG 507 (510)
T ss_pred cHHHHHHHhccceeeEecccccc-----cchhheecccchhhhhhHHHHHHHHHHhc
Confidence 34556677663333432211111 11156533 34689999999999887653
No 374
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.18 E-value=2.8e-11 Score=117.01 Aligned_cols=222 Identities=17% Similarity=0.248 Sum_probs=56.2
Q ss_pred ChHHHHHHHHHHHhcCCC----CCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEE-c
Q 011567 125 HEKLLESCTSALEKYGVG----SCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVA-D 199 (483)
Q Consensus 125 ~p~i~~a~~~~l~~~g~g----~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~-~ 199 (483)
++++.+++.+....|..- ..|.|+. -+..+++.++.++|.|+++++++..+|+..++.+++..+.+|+. .
T Consensus 19 ~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~-----R~~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la~~~EvIvsRG 93 (367)
T PF03841_consen 19 SEEAIEAVAEVASGYSNLEYDLETGKRGS-----RYAHVEELLCELTGAEAALVVNNNAAAVLLALNTLAKGKEVIVSRG 93 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccc-----cccccccccccccccccccccccccccccccccccccccccccccc
Confidence 467778887777665321 1122221 13457888999999999999999999999999988765444432 1
Q ss_pred C----CchhHHHhHhhhcCCeEEEecCCC---HHHHHHHHHHhhhhhhhccCccEEE-EEe-cccCCCC--CccChHHHH
Q 011567 200 E----GVHWGIQNGLYLSRSTVVYFKHND---MDSLRNTLERVTADNKRAKKLRRYI-VVE-AVYQNSG--QIAPLDELI 268 (483)
Q Consensus 200 ~----~~h~s~~~g~~~s~~~v~~~~~~d---~~~Le~~l~~~~~~~~~~~~~~~~i-v~e-~v~~~~G--~i~~L~~l~ 268 (483)
+ +-.+.+.+.+..+|++++.+...+ .+|.|+.+.+ + ++++ -+. +.|...| ...++++++
T Consensus 94 elVeiGgsFRip~vm~~sGa~lvEVGttN~t~~~Dye~AI~e---~-------Ta~ll~Vh~Sn~~i~GFt~~~~~~el~ 163 (367)
T PF03841_consen 94 ELVEIGGSFRIPDVMRQSGARLVEVGTTNRTHLSDYEKAITE---N-------TAALLKVHTSNFRIQGFTGEVSLEELA 163 (367)
T ss_dssp -----------------------------------------------------------------------------HHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccc---c-------ccccccccccccccccccccccHHHHH
Confidence 1 222346677888999998887654 4455555543 2 4444 333 3444334 234799999
Q ss_pred HHHHHcCcEEEEeCccccccccCCCCccccc---cCCCCCceeEEEcccccccc-CCCceeeccHHHHHHHHhcCCceee
Q 011567 269 RLKEKYRFRVFLDESNSFGVLGRSGRGLTEH---CGVPVDKIDIVTAAMGHALA-TEGGFCTGSARVVDHQRLSSSGYVF 344 (483)
Q Consensus 269 ~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~---~~v~~~~~Di~~~s~~K~lg-~~GG~i~~~~~~~~~~~~~~~~~~f 344 (483)
+++++|++++|+|-.-+... .-+..|+... ...-...+|++++|-.|.+| +..|+++|++++++.++.+... .
T Consensus 164 ~la~~~~lp~i~DlgsG~l~-dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGiI~Gkk~lI~~lk~~pl~--R 240 (367)
T PF03841_consen 164 ELAKEHGLPVIVDLGSGLLV-DLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGIIVGKKELIEKLKKHPLG--R 240 (367)
T ss_dssp HHHHHHT--EEEE-TTHHHH-HHHTT----------CCCCT-SEEEEETTSSSSS-S-EEEEEEHHHHHHHHHHHHT--T
T ss_pred HHHhhcCCcEEEECCCCCCc-CcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEEEEeCHHHHHHHhhCCCc--c
Confidence 99999999999997542211 0000111110 11112557999999999997 5579999999999998765322 2
Q ss_pred cCCCcHHHHHHHHHHHHHHh
Q 011567 345 SASLPPYLASAAITAIDVLE 364 (483)
Q Consensus 345 s~~~~p~~~aaa~~al~~l~ 364 (483)
..-..-+..++..++|+.+.
T Consensus 241 alrvdK~tla~L~atL~~Y~ 260 (367)
T PF03841_consen 241 ALRVDKLTLAALEATLRLYL 260 (367)
T ss_dssp T-B--HHHHHHHHHHHHH--
T ss_pred eEeeCHHHHHHHHHHHHHHH
Confidence 22346777787888887654
No 375
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.18 E-value=4.8e-09 Score=104.90 Aligned_cols=279 Identities=16% Similarity=0.207 Sum_probs=147.8
Q ss_pred CcccChHHHHHHHHHHHhhhCCCC--EEEecccHHHHH---hhhhhhccCCcEEEEcCCchhHHHhHhh----hcCCeEE
Q 011567 148 GFYGTIDVHLDCEARIAKFLGTPD--SILYSYGLSTMF---SAIPCFCKKGDLIVADEGVHWGIQNGLY----LSRSTVV 218 (483)
Q Consensus 148 ~~~g~~~~~~~l~~~La~~~g~e~--~i~~~sG~~a~~---~ai~~~~~~gdiI~~~~~~h~s~~~g~~----~s~~~v~ 218 (483)
..-|+.+..-+++..+++++|.+- +=++..++++-+ .+.+...++++.|++++..|......++ ..+.+++
T Consensus 104 isQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv 183 (429)
T PF02347_consen 104 ISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIV 183 (429)
T ss_dssp GBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEE
Confidence 345666778899999999999985 456666664444 3344444445689999999988776544 3566777
Q ss_pred EecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCcc--ccccccCCCCcc
Q 011567 219 YFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESN--SFGVLGRSGRGL 296 (483)
Q Consensus 219 ~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~--s~g~lg~~G~g~ 296 (483)
.++.++..... .+ .++.|++..+.. .|.+.++++|.++++++|.++++ .+. +.+.+-+
T Consensus 184 ~~~~~~~~~~d------~~-------~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~~----- 243 (429)
T PF02347_consen 184 EVPLDEDGTTD------DD-------DTAAVMVQNPNT-FGVFEDIKEIADIAHAAGALVIV-GADPNALGGLKS----- 243 (429)
T ss_dssp EE-BBTTCSB-------ST-------TEEEEEEESS-T-TSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC-------
T ss_pred EecccccCCcc------cc-------CeEEEEeecCCC-CceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcCC-----
Confidence 77654321111 22 377777776654 49999999999999999999988 543 3332221
Q ss_pred ccccCCCCCceeEEEccccccccC---CC----ceeeccHHHHHHHHh----------cCCceeec------------C-
Q 011567 297 TEHCGVPVDKIDIVTAAMGHALAT---EG----GFCTGSARVVDHQRL----------SSSGYVFS------------A- 346 (483)
Q Consensus 297 ~~~~~v~~~~~Di~~~s~~K~lg~---~G----G~i~~~~~~~~~~~~----------~~~~~~fs------------~- 346 (483)
...+| .||++++ +|.||. .| ||++.+++++..+.. ...+|..+ +
T Consensus 244 Pge~G-----ADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAt 317 (429)
T PF02347_consen 244 PGEYG-----ADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKAT 317 (429)
T ss_dssp GGGGT------SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCST
T ss_pred hhhcC-----ccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchh
Confidence 11233 3898765 999972 12 788777776655410 11111100 0
Q ss_pred C---CcHHHHH-HHHHHHHHH--hcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHH
Q 011567 347 S---LPPYLAS-AAITAIDVL--EENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLE 420 (483)
Q Consensus 347 ~---~~p~~~a-aa~~al~~l--~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~ 420 (483)
| .+..+++ ++..-+..+ +...++-++...++.++.++|+++.+.++.. .+++-+.+.... + ....
T Consensus 318 SNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~---~~f~e~v~~~~~-----~-~~~~ 388 (429)
T PF02347_consen 318 SNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFDN---PFFFEFVVVFSK-----D-KEVE 388 (429)
T ss_dssp T---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSS---SSBSSEEEEESS-------HHHH
T ss_pred hhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCC---CCceeeeeecCC-----c-HHHH
Confidence 0 1222322 222222222 1224677788889999999999863444322 222211111110 1 2223
Q ss_pred HHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHH
Q 011567 421 DIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESL 471 (483)
Q Consensus 421 ~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l 471 (483)
++.++.+. .|+... ++. ...+-+|++-.+|++|||++++++
T Consensus 389 ~l~~~~~~-~gl~~~---~~~------~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 389 ELLKRGIE-GGLNLR---YPD------DGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp HHHHTT-----EEEG---GG-------SSEEEEE--TT--HHHHHHHHH--
T ss_pred HHHHHHHh-cCCCcc---ccC------CCeEEEEccCCCCHHHHHHHHhcC
Confidence 35554443 353332 221 134889999999999999999875
No 376
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.11 E-value=1.9e-08 Score=96.91 Aligned_cols=276 Identities=13% Similarity=0.133 Sum_probs=163.9
Q ss_pred HHHHHHHHHhh-hCCC---------CEEEecccHHHHHhhhhhh--ccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCC
Q 011567 156 HLDCEARIAKF-LGTP---------DSILYSYGLSTMFSAIPCF--CKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN 223 (483)
Q Consensus 156 ~~~l~~~La~~-~g~e---------~~i~~~sG~~a~~~ai~~~--~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~ 223 (483)
..++.+.++++ ||.+ ..+-..+|+.|+..+..-+ ..+...|.++++.......-+...|.++..|++=
T Consensus 71 ~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yy 150 (396)
T COG1448 71 LPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYY 150 (396)
T ss_pred cHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeecc
Confidence 34555555555 3422 2344578888888775443 3455568888888777666677788888877753
Q ss_pred -------CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCC
Q 011567 224 -------DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSG 293 (483)
Q Consensus 224 -------d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G 293 (483)
|.+.+-..|++..+ ...+++-..-+|+||.-.. +++|.++.++.|.+-++|=+|-+ ++
T Consensus 151 d~~~~~~df~~mla~L~~a~~-------~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQG--F~--- 218 (396)
T COG1448 151 DAETKGLDFDGMLADLKTAPE-------GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQG--FA--- 218 (396)
T ss_pred ccccccccHHHHHHHHHhCCC-------CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhh--hc---
Confidence 34444444444333 3445555556778887555 79999999999999999999743 22
Q ss_pred Cccc-cccC------CCCCceeEEEccccccccCC----Ccee--eccHHHHHHHHhc---CCceeecCCCcHHHHHHHH
Q 011567 294 RGLT-EHCG------VPVDKIDIVTAAMGHALATE----GGFC--TGSARVVDHQRLS---SSGYVFSASLPPYLASAAI 357 (483)
Q Consensus 294 ~g~~-~~~~------v~~~~~Di~~~s~~K~lg~~----GG~i--~~~~~~~~~~~~~---~~~~~fs~~~~p~~~aaa~ 357 (483)
.|+- +.++ ..+. -+++.|+||.||.- |++. ..+.+..+..... ..-..||. +|...++.+.
T Consensus 219 ~GleeDa~~lR~~a~~~~~--~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySn-PP~~Ga~vva 295 (396)
T COG1448 219 DGLEEDAYALRLFAEVGPE--LLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSN-PPAHGAAVVA 295 (396)
T ss_pred cchHHHHHHHHHHHHhCCc--EEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCC-CchhhHHHHH
Confidence 2221 1111 1111 57889999999843 4543 3344443332111 11113432 2333333333
Q ss_pred HHHH-------HHhcCcHHHHHHHHHHHHHHHhhccC-C--CceeecCCCCCEEEEE-ecCCCCCchhhHHHHHHHHHHH
Q 011567 358 TAID-------VLEENPDLITKLKKNTAILRTGLSDI-H--GLSIASNPESPIVFLI-LEKSTGSMKNDLQLLEDIADWA 426 (483)
Q Consensus 358 ~al~-------~l~~~~~~~~~l~~~~~~l~~~L~~~-~--~~~i~~~~~~~i~~l~-l~~~~~~~~~~~~~~~~i~~~~ 426 (483)
..|+ +.++...+++++.+++..|.+.|++. + .+..... +..++... + ..+-+.++
T Consensus 296 ~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~-Q~GMFsy~Gl-------------s~~QV~rL 361 (396)
T COG1448 296 TILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIIS-QRGMFSYTGL-------------SPEQVDRL 361 (396)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhh-cCceeecCCC-------------CHHHHHHH
Confidence 2331 11233468888999999999999773 1 2444433 33333332 2 11235567
Q ss_pred HHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 427 LKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 427 l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
.++.||++.... ||++. .+++..|+.++++|.++
T Consensus 362 ree~~IY~v~sG-------------Ri~va-Gl~~~ni~~va~ai~~v 395 (396)
T COG1448 362 REEFGIYLVASG-------------RINVA-GLNTSNIDYVAKAIAAV 395 (396)
T ss_pred HHhccEEEecCC-------------eeeec-cCChhhHHHHHHHHHhh
Confidence 788899987542 78875 48999999999998765
No 377
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.09 E-value=3.8e-08 Score=94.44 Aligned_cols=245 Identities=14% Similarity=0.203 Sum_probs=131.4
Q ss_pred ccChH-HHHHHHHHHHhhhCCCCEEEe---cccHHHHHhhhhhhccCCcEEEEc-CCchhHHHhHhhhc----------C
Q 011567 150 YGTID-VHLDCEARIAKFLGTPDSILY---SYGLSTMFSAIPCFCKKGDLIVAD-EGVHWGIQNGLYLS----------R 214 (483)
Q Consensus 150 ~g~~~-~~~~l~~~La~~~g~e~~i~~---~sG~~a~~~ai~~~~~~gdiI~~~-~~~h~s~~~g~~~s----------~ 214 (483)
||..| -.+.|++-.|+.||.|++++= .||+.|+..++.++.++||.++.- ..-+-.+.+.+-+. |
T Consensus 49 YGY~D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~G 128 (403)
T PF06838_consen 49 YGYDDIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFG 128 (403)
T ss_dssp T-TT-HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT
T ss_pred CCCCCccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhC
Confidence 66666 667899999999999999874 899999999999999999988753 33344444444322 2
Q ss_pred CeEEEecC--C---CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCc-------cChHHHHHHHHHc--CcEEEE
Q 011567 215 STVVYFKH--N---DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQI-------APLDELIRLKEKY--RFRVFL 280 (483)
Q Consensus 215 ~~v~~~~~--~---d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i-------~~L~~l~~l~~k~--~~~li~ 280 (483)
.....++. + |.+.+++.++. ++++|.+.- ..|.- ..+++++++.++. ++.+++
T Consensus 129 i~Y~~v~L~~dg~~D~~~i~~~~~~----------~tk~v~IQR---SrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifV 195 (403)
T PF06838_consen 129 IKYREVPLTEDGTIDWEAIKKALKP----------NTKMVLIQR---SRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFV 195 (403)
T ss_dssp -EEEE--B-TTSSB-HHHHHHHHHT----------TEEEEEEE----S-TTSSS----HHHHHHHHHHHHHH-TTSEEEE
T ss_pred ceeEEEeecCCCCcCHHHHHHhhcc----------CceEEEEec---CCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEE
Confidence 33333332 1 66667666653 267777643 12322 1256666666655 799999
Q ss_pred eCccccccccCCCCccccccCCCCCceeEEEcccccccc----CCCceeeccHHHHHHH--HhcCCceeecCCCcHHHHH
Q 011567 281 DESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA----TEGGFCTGSARVVDHQ--RLSSSGYVFSASLPPYLAS 354 (483)
Q Consensus 281 DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg----~~GG~i~~~~~~~~~~--~~~~~~~~fs~~~~p~~~a 354 (483)
|.+|+.++-- .|--. -.+|++.||+-|..| +.|||++|++++++.. |..+.+.--..+...-...
T Consensus 196 DNCYGEFvE~------~EP~~---vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G~t~~~~R 266 (403)
T PF06838_consen 196 DNCYGEFVET------QEPTE---VGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVGATLGTNR 266 (403)
T ss_dssp E-TTTTTTSS------S-GGG---GT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS--TTTHH
T ss_pred eCCcceeccc------cCccc---cchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccccccccCcchHH
Confidence 9999765421 11111 234999999999996 5689999999999875 3332221111000000011
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHhhccCCCceeecCCC----CCEEEEEecCCCCCchhhHHHHHHHHHHHHHh
Q 011567 355 AAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPE----SPIVFLILEKSTGSMKNDLQLLEDIADWALKE 429 (483)
Q Consensus 355 aa~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~----~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~ 429 (483)
.....|- --|.......+-+......++++ |+++.+... .-+..+.+. +.+.+..+++. .++
T Consensus 267 ~~~QGlF---lAP~vV~eAlKgaif~A~~fe~l-G~~v~P~~~~~R~DiIQai~l~--------~~e~l~~FC~~-iQ~ 332 (403)
T PF06838_consen 267 LMFQGLF---LAPHVVGEALKGAIFAAALFEKL-GFEVSPKPDDPRSDIIQAIELG--------SPEKLIAFCQG-IQA 332 (403)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHT-T-EEES-TTS--SSS-EEEE-S--------SHHHHHHHHHH-HHH
T ss_pred HHHhHHh---hchHHHHHHHHHHHHHHHHHHHc-CCcCCCCCCCCCCceEEEEECC--------CHHHHHHHHHH-HHh
Confidence 1111111 11334444443444444455555 998875432 337778874 34556677774 443
No 378
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.09 E-value=2.6e-08 Score=97.37 Aligned_cols=300 Identities=11% Similarity=0.117 Sum_probs=150.7
Q ss_pred HHHHHHHhhhCCC---CEEEecccH-HHHHhhhhhh--ccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC---C-----
Q 011567 158 DCEARIAKFLGTP---DSILYSYGL-STMFSAIPCF--CKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH---N----- 223 (483)
Q Consensus 158 ~l~~~La~~~g~e---~~i~~~sG~-~a~~~ai~~~--~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~---~----- 223 (483)
.|...+-+..|.. .+++..-.+ .++..++.++ ..+.+.|+.+...|.+-.+++...|.+++.++. .
T Consensus 60 ~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~t 139 (389)
T PF05889_consen 60 SLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELIT 139 (389)
T ss_dssp HHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEE
T ss_pred HHHHHHHHHcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeec
Confidence 3444444556743 466663333 2233333333 356889999999999999999999988776653 2
Q ss_pred CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC-hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCC
Q 011567 224 DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP-LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGV 302 (483)
Q Consensus 224 d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~-L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v 302 (483)
|.+++|+.+++..++ ..+.++..+....|..+| +.+|.++|++||+..++..+|+.-.- ..-.-+.+.+..
T Consensus 140 d~~~ie~~i~~~G~~-------~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~-~~~~~i~~a~~~ 211 (389)
T PF05889_consen 140 DLEAIEAKIEELGAD-------NILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSS-KCMHLIQQAWRV 211 (389)
T ss_dssp HHHHHHHHHHHHCGG-------GEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-H-HHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCC-------CeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHH-HHHHHHHHHHhc
Confidence 578888888776554 466666666666788888 99999999999999999999986000 000000000000
Q ss_pred CCCceeEEEcccccccc-CCCc-eeecc-HHHHHHHHhcCCceeecCCCcHHHHHHHHHHHHHHh--cCcHHHHHHHHHH
Q 011567 303 PVDKIDIVTAAMGHALA-TEGG-FCTGS-ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE--ENPDLITKLKKNT 377 (483)
Q Consensus 303 ~~~~~Di~~~s~~K~lg-~~GG-~i~~~-~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~al~~l~--~~~~~~~~l~~~~ 377 (483)
-.+|..+-|..|-|= +.|| .+++. +..++.....-.+ -++..|..= ....|..+- ....++....++.
T Consensus 212 --GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~YpG---Ras~sp~ld--~~itLl~LG~~g~~~ll~~r~~~f 284 (389)
T PF05889_consen 212 --GRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYPG---RASASPSLD--LFITLLSLGCTGYGALLKERKASF 284 (389)
T ss_dssp --STCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSHS---HBTSHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCcceeeeecCCCEEecCCCcEEEecCHHHHHHHHHHhhh---hhhcccchH--HHHHHHHHhhhHHHHHHHHHHHHH
Confidence 112566668888872 3344 44443 3455555432111 112222211 111111111 1123444444455
Q ss_pred HHHHHhhccCC---CceeecCCCCCE-EEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEe----eccccccc--CCC
Q 011567 378 AILRTGLSDIH---GLSIASNPESPI-VFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVT----SKRSMLDK--CRL 447 (483)
Q Consensus 378 ~~l~~~L~~~~---~~~i~~~~~~~i-~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~----~~~~~~~~--~~~ 447 (483)
.+++++|+++. +-.+...+..++ +.+.+..-..... .....+... |..+||.=.+ .......+ ..+
T Consensus 285 ~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~---k~~~~lgs~-Lf~R~VsG~RvV~~~~~~~tsh~~~yp 360 (389)
T PF05889_consen 285 PYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQ---KDGTFLGSM-LFKRGVSGIRVVTPGGKKQTSHSSNYP 360 (389)
T ss_dssp HHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCS---SHHHHHHHH-HHHTTEESSEEEETSSCEEETTSS--S
T ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhcc---chhhhHHHH-HHhCCcccceeeccCCCcccccCCCCc
Confidence 55555554321 322332334443 3444432111111 223345554 5556664322 11100001 111
Q ss_pred CCceEEEccCCCCHHHHHHHHHHHHHHHH
Q 011567 448 PVGIRLFVSAAHSEADLVKACESLKRISA 476 (483)
Q Consensus 448 ~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 476 (483)
.+-+.++-...+|+||||.+++.|+++++
T Consensus 361 ~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 361 CPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp SSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 24488878889999999999999999874
No 379
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.08 E-value=4.9e-08 Score=95.19 Aligned_cols=320 Identities=14% Similarity=0.162 Sum_probs=189.3
Q ss_pred eeEEEeecCCCCCCCCChHHHH-HHHHHHHhcCCC----CCCCCCcccChHHHHHHHHHHHhhhCCC--CEEEecccHHH
Q 011567 109 KEVVNFASANYLGLIGHEKLLE-SCTSALEKYGVG----SCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLST 181 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~-a~~~~l~~~g~g----~~~~~~~~g~~~~~~~l~~~La~~~g~e--~~i~~~sG~~a 181 (483)
+.+..|....|.++ .-|.+++ .+ +++-++- ..-|--.-|..+...++...+++++|.+ ++=++..++++
T Consensus 74 ~~~~sfiG~GyY~~-~~P~vI~rni---le~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAa 149 (450)
T COG0403 74 KVFTSFIGAGYYDT-YTPPVILRNI---LENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAA 149 (450)
T ss_pred chhhhhccCcccCC-cCcHHHHHHh---hcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHH
Confidence 35556666677777 4455543 33 3332110 1111122233445567788899999976 67788888766
Q ss_pred HHhhhhhh---ccCCcEEEEcCCchhHHHhHhh----hcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecc
Q 011567 182 MFSAIPCF---CKKGDLIVADEGVHWGIQNGLY----LSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAV 254 (483)
Q Consensus 182 ~~~ai~~~---~~~gdiI~~~~~~h~s~~~g~~----~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v 254 (483)
-+++..+. .++...+++++.+|..+...++ -.|.+++..+.+|.++|++. ... .+..++++-+
T Consensus 150 AEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~-~~~---------~~~gv~vQyP 219 (450)
T COG0403 150 AEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESA-DDG---------DVFGVLVQYP 219 (450)
T ss_pred HHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhhhhc-ccc---------CeEEEEEecC
Confidence 66665443 3446789999999998887665 33567888888888888776 221 2677888776
Q ss_pred cCCCCCccChHHHHHHHHHcCcEEEEe-CccccccccCCCCccccccCCCCCceeEEEcccc-----cccc-CCCceeec
Q 011567 255 YQNSGQIAPLDELIRLKEKYRFRVFLD-ESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMG-----HALA-TEGGFCTG 327 (483)
Q Consensus 255 ~~~~G~i~~L~~l~~l~~k~~~~li~D-Ea~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~-----K~lg-~~GG~i~~ 327 (483)
..-++...++.+|.+.++++|.++++= +..+.+.+-+-|. +| .||++|+.. -+|| +..||.+.
T Consensus 220 ~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe-----~G-----ADIvvG~~QrfGvPmgfGGPhag~fA~ 289 (450)
T COG0403 220 NTFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPGE-----FG-----ADIVVGSAQRFGVPMGFGGPHAGYFAV 289 (450)
T ss_pred CCCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCccc-----cC-----CceEEecCcccCCCcCCCCcceeeeeE
Confidence 644236667999999999999887765 4556665544221 33 388887642 2223 22377777
Q ss_pred cHHHHHHH----------------------------Hh-cCCceeecCCCcHHHHHHHHHHHHHHh---cCcHHHHHHHH
Q 011567 328 SARVVDHQ----------------------------RL-SSSGYVFSASLPPYLASAAITAIDVLE---ENPDLITKLKK 375 (483)
Q Consensus 328 ~~~~~~~~----------------------------~~-~~~~~~fs~~~~p~~~aaa~~al~~l~---~~~~~~~~l~~ 375 (483)
+++.+..+ |. ...+.+.+ +..++|.+.+..-.+. ...++-.+..+
T Consensus 290 ~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICT---nQaLlA~~As~y~~~hGp~GLk~iA~r~~~ 366 (450)
T COG0403 290 KDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICT---NQALLALAASMYAVYHGPQGLKEIAERIHR 366 (450)
T ss_pred hHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhH---HHHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 76664432 11 11111111 2222221111111111 12356777888
Q ss_pred HHHHHHHhhccCC-CceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEE
Q 011567 376 NTAILRTGLSDIH-GLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLF 454 (483)
Q Consensus 376 ~~~~l~~~L~~~~-~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~ 454 (483)
+..++.++|++.. |+.+... ..+--+.++- +......+..+.. ..|+-++.... ..+-++
T Consensus 367 ~a~~la~~L~~~~~g~~~~~~--~fFdt~~v~~-------~~~~~~~l~~~~~-~~G~~L~~~~~---------~~~~ia 427 (450)
T COG0403 367 LAAYLAAGLKEIGAGVELVFD--HFFDTFTVRV-------PEEVAEALLAAAI-AGGINLRRVDA---------DTVLIA 427 (450)
T ss_pred HHHHHHHHHhhcCCceEeccc--cceeeEEEec-------chhHHHHHHHHHH-hcCCceeeecC---------CceEEE
Confidence 8999999998653 5666533 3333333321 1123445555544 35888875432 236689
Q ss_pred ccCCCCHHHHHHHHHHHHHH
Q 011567 455 VSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 455 ~~~~~t~edi~~~~~~l~~~ 474 (483)
+.-..|++||+.+++++...
T Consensus 428 ~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 428 LTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred eecccCHHHHHHHHHHHhhh
Confidence 99999999999999988754
No 380
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.02 E-value=8.1e-08 Score=92.81 Aligned_cols=298 Identities=17% Similarity=0.156 Sum_probs=146.7
Q ss_pred cChHHHHHHHHHHHhhhCCC--CEEEecccHHHHH-hhh-hh----hc-------cC-CcEEEEcCCchhHHHhHhhhcC
Q 011567 151 GTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMF-SAI-PC----FC-------KK-GDLIVADEGVHWGIQNGLYLSR 214 (483)
Q Consensus 151 g~~~~~~~l~~~La~~~g~e--~~i~~~sG~~a~~-~ai-~~----~~-------~~-gdiI~~~~~~h~s~~~g~~~s~ 214 (483)
|..+-..++++..|+++|.+ +.++..+.+-.++ -++ .+ .. +. .-..+|+-+-+-....-++.-|
T Consensus 66 G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~G 145 (425)
T PF12897_consen 66 GGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFG 145 (425)
T ss_dssp S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT
T ss_pred CccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhC
Confidence 44555678999999999965 4555544443222 111 11 11 11 2346677666545444556668
Q ss_pred CeEEEecCC----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCC-CCCccChHHHHHHH----HHcCcEEEEeCccc
Q 011567 215 STVVYFKHN----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQN-SGQIAPLDELIRLK----EKYRFRVFLDESNS 285 (483)
Q Consensus 215 ~~v~~~~~~----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~-~G~i~~L~~l~~l~----~k~~~~li~DEa~s 285 (483)
.+.+.++.+ ||+.+|++..+.. .++-|++-|.|+| +|....-+.+++|+ ...+++++-|.+|+
T Consensus 146 iemi~VpM~~dGPDmD~Ve~LV~~D~--------svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~ 217 (425)
T PF12897_consen 146 IEMIPVPMTEDGPDMDMVEELVAEDP--------SVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYA 217 (425)
T ss_dssp -EEEEEEEETTEE-HHHHHHHTHTST--------TEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTT
T ss_pred cEEEecCCCCCCCCHHHHHHHHhcCC--------ccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCce
Confidence 888888754 8999999987644 2788999998876 88887755444544 35699999999998
Q ss_pred cccc-cCCCCc-------cccccCCCCCceeEEEccccccc-cCCC-ceeeccHHHHHHHHhcCCceeecC-CCcHHHHH
Q 011567 286 FGVL-GRSGRG-------LTEHCGVPVDKIDIVTAAMGHAL-ATEG-GFCTGSARVVDHQRLSSSGYVFSA-SLPPYLAS 354 (483)
Q Consensus 286 ~g~l-g~~G~g-------~~~~~~v~~~~~Di~~~s~~K~l-g~~G-G~i~~~~~~~~~~~~~~~~~~fs~-~~~p~~~a 354 (483)
+-.+ +..-+- .++..|- |+. -++.+|.||-- .+.| +|++++..-+++++......+-+. -+|.+--+
T Consensus 218 vHhL~~~~~~~~~~nil~~~~~AGn-pdr-v~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHv 295 (425)
T PF12897_consen 218 VHHLYDEEPRDALLNILDACAKAGN-PDR-VYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHV 295 (425)
T ss_dssp T-BSSSSSS------HHHHHHHTT--TTS-EEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHH
T ss_pred EeeccccccchhhhHHHHHHHHcCC-CCe-EEEEecccccccCCcceeeeecCHHHHHHHHHHhcCceeCccHHHHHHHH
Confidence 7665 322111 1222332 233 46678999976 3333 678888877776543311111110 01221111
Q ss_pred HHHHHHHHHhcCc-HHHHHHHH-----------HHHHHHHhhc-cCCCc-eeecCCCCCEEEEEecCCCCCchhhHHHHH
Q 011567 355 AAITAIDVLEENP-DLITKLKK-----------NTAILRTGLS-DIHGL-SIASNPESPIVFLILEKSTGSMKNDLQLLE 420 (483)
Q Consensus 355 aa~~al~~l~~~~-~~~~~l~~-----------~~~~l~~~L~-~~~~~-~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~ 420 (483)
+++.+.+ .+.++.++ ..+.|.+.|. .. ++ .-..+.++.++.+...+. .+.
T Consensus 296 ------rff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~-~ia~Wt~P~GGYFIsld~~~G---------~Ak 359 (425)
T PF12897_consen 296 ------RFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGL-GIASWTKPKGGYFISLDVLDG---------TAK 359 (425)
T ss_dssp ------HHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGG-TSEEE---SBSS-EEEEESTT----------HH
T ss_pred ------HHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCC-CeeEecCCCCceEEEEecCCC---------hHH
Confidence 1222111 22222222 2334444554 22 22 333455777888887432 245
Q ss_pred HHHHHHHHhCCEEEEeecccccccCCCC--CceEEEccCCCCHHHHHHHHHHHHHHHHH
Q 011567 421 DIADWALKEDGVFVVTSKRSMLDKCRLP--VGIRLFVSAAHSEADLVKACESLKRISAV 477 (483)
Q Consensus 421 ~i~~~~l~~~Gv~v~~~~~~~~~~~~~~--~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 477 (483)
++++. .++.||.+++... +.+....| ..|||+|+. -+.+|++.+++.+.-+++-
T Consensus 360 rvV~l-akeAGV~LT~AGA-tfPyg~DP~D~nIRiAPS~-P~leel~~Am~~~~~cv~l 415 (425)
T PF12897_consen 360 RVVEL-AKEAGVALTPAGA-TFPYGKDPRDSNIRIAPSY-PSLEELETAMDVFATCVKL 415 (425)
T ss_dssp HHHHH-HHHTTEE---TTT-TSGGG--TTS-EEEE--SS-S-HHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHhCceeCCCCC-CCCCCCCCCCCcEEecCCC-CCHHHHHHHHHHHHHHHHH
Confidence 67764 4567999998543 11111112 239999876 6899999999999887653
No 381
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.02 E-value=4.6e-07 Score=89.02 Aligned_cols=302 Identities=14% Similarity=0.110 Sum_probs=173.8
Q ss_pred hHHHHHHHHH----HHhhhCC-----------CCEEEecccHHHHHhhhhhhc-------cC------------CcEEEE
Q 011567 153 IDVHLDCEAR----IAKFLGT-----------PDSILYSYGLSTMFSAIPCFC-------KK------------GDLIVA 198 (483)
Q Consensus 153 ~~~~~~l~~~----La~~~g~-----------e~~i~~~sG~~a~~~ai~~~~-------~~------------gdiI~~ 198 (483)
.+...+||.- |+++++. .-.++..|.++++..++-+.. +. .=++++
T Consensus 108 sPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~ 187 (511)
T KOG0628|consen 108 SPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYC 187 (511)
T ss_pred CcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEe
Confidence 3455667744 4444442 246777888888766643211 11 236788
Q ss_pred cCCchhHHHhHhhhcCCeEEEecCC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccC-CCCCccChHHHHHHHH
Q 011567 199 DEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQ-NSGQIAPLDELIRLKE 272 (483)
Q Consensus 199 ~~~~h~s~~~g~~~s~~~v~~~~~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~-~~G~i~~L~~l~~l~~ 272 (483)
.+..|.++.+++.+.+.+.+.++.. +.+.|++.+++..+. + -+-++++-.+-+ +.-...+|.+|..+|+
T Consensus 188 SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~ar----G-lIPf~v~at~GTT~~ca~D~l~elg~Vc~ 262 (511)
T KOG0628|consen 188 SDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIAR----G-LIPFFVCATLGTTSSCAFDELEELGPVCR 262 (511)
T ss_pred cCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhC----C-CccEEEEEeecCccccccccHHHhcchhh
Confidence 9999999999999999988777644 567888888765442 1 233444433322 2234456999999999
Q ss_pred HcCcEEEEeCccccccccC-CCCccccccCCCCCceeEEEccccccccC---CC------ceee-----ccHHHHHHHH-
Q 011567 273 KYRFRVFLDESNSFGVLGR-SGRGLTEHCGVPVDKIDIVTAAMGHALAT---EG------GFCT-----GSARVVDHQR- 336 (483)
Q Consensus 273 k~~~~li~DEa~s~g~lg~-~G~g~~~~~~v~~~~~Di~~~s~~K~lg~---~G------G~i~-----~~~~~~~~~~- 336 (483)
++|+||++|.+|++..+.- .-|++. -|+ +.+|-+-...+|++-. +. |+-+ .++...+|-.
T Consensus 263 ~~glWLHVDAAYAGsa~iCpE~r~l~--rGi--e~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~ 338 (511)
T KOG0628|consen 263 EEGLWLHVDAAYAGSAFICPEFRYLM--RGI--EYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQ 338 (511)
T ss_pred hcCEEEEeehhhccccccCHHHHHHh--hcc--hhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhh
Confidence 9999999999998654321 111111 133 3346666677887731 11 2100 1111111110
Q ss_pred hcCCceeecCCCcHHHHHHHHHHH------HHHhc--CcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCC
Q 011567 337 LSSSGYVFSASLPPYLASAAITAI------DVLEE--NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKS 408 (483)
Q Consensus 337 ~~~~~~~fs~~~~p~~~aaa~~al------~~l~~--~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~ 408 (483)
.....|.+-. -|+. --..+| +.+-- ..+.+.+..++++.|.+.+.+-+.+++.....-.++++++++.
T Consensus 339 ~~~~Dyrhwq--ipl~--rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvcFRlk~~ 414 (511)
T KOG0628|consen 339 GSAPDYRHWQ--IPLG--RRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVCFRLKGD 414 (511)
T ss_pred ccCCCccccc--cccc--cchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccceeEEeecCC
Confidence 1111111110 0111 011122 22211 1223344445666777666665678887666667888998653
Q ss_pred CCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCC-CCHHHHHHHHHHHHHHHHHHHh
Q 011567 409 TGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAA-HSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 409 ~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~-~t~edi~~~~~~l~~~~~~~~~ 480 (483)
......+.+++-..+.|.+.+..... + --||+++.+. .+++|++++.+.|.+...+++.
T Consensus 415 -------N~~ne~Ll~~in~~g~i~l~~~~l~g--k----~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~ 474 (511)
T KOG0628|consen 415 -------NEINEALLNRLNSSGRIHLVPASLHG--K----FVLRFAVCSPLTNESDIDEAWKIIFEAADELFE 474 (511)
T ss_pred -------cHHHHHHHHHHHhcCcEEEEEeeecc--e----EEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 33455677766666778887654311 0 1199998664 5788999999999998887553
No 382
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.01 E-value=2.8e-07 Score=88.56 Aligned_cols=333 Identities=16% Similarity=0.229 Sum_probs=180.8
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhh----CC---CCEEEeccc-HHHHHhhhhhhc-cCCcEE
Q 011567 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT---PDSILYSYG-LSTMFSAIPCFC-KKGDLI 196 (483)
Q Consensus 126 p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~----g~---e~~i~~~sG-~~a~~~ai~~~~-~~gdiI 196 (483)
..+++.+...|...| |+-+.|..+.-..-+++.+|++. |. ++-|+.++| +.|+...+..++ ++++-|
T Consensus 89 ~Dai~RA~~~L~~~g----Gs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~Gv 164 (475)
T KOG0258|consen 89 TDAIKRAKRILNDCG----GSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGV 164 (475)
T ss_pred HHHHHHHHHHHHhcC----CcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCce
Confidence 345566666666533 23334544444455566666664 42 233455544 577888877764 466777
Q ss_pred EEcCCchhHHHhHhhhcCCeEEEe--c-----CCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC---hHH
Q 011567 197 VADEGVHWGIQNGLYLSRSTVVYF--K-----HNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP---LDE 266 (483)
Q Consensus 197 ~~~~~~h~s~~~g~~~s~~~v~~~--~-----~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~---L~~ 266 (483)
+++-+-+.-+-..+.+.+...+.+ + .-|.++|++.+++..+. -..+++||++|- |++|.+.. +++
T Consensus 165 liPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~----i~~r~lvvINPG-NPTGqvls~e~ie~ 239 (475)
T KOG0258|consen 165 LIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKG----INPRALVVINPG-NPTGQVLSEENIEG 239 (475)
T ss_pred EeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhcc----CCceEEEEECCC-CccchhhcHHHHHH
Confidence 777665554444455555544332 2 12788999988776532 124666777664 56787765 899
Q ss_pred HHHHHHHcCcEEEEeCccccccccCCCCcc-----ccccC-CCCCceeEE-Eccccccc----cCCCcee--ec-cHHHH
Q 011567 267 LIRLKEKYRFRVFLDESNSFGVLGRSGRGL-----TEHCG-VPVDKIDIV-TAAMGHAL----ATEGGFC--TG-SARVV 332 (483)
Q Consensus 267 l~~l~~k~~~~li~DEa~s~g~lg~~G~g~-----~~~~~-v~~~~~Di~-~~s~~K~l----g~~GG~i--~~-~~~~~ 332 (483)
|.+.|.++|+.|+.||+|---++...-+.. .-+.| -.++.+.+. ..|.||++ |..|||+ ++ ++++.
T Consensus 240 i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~ 319 (475)
T KOG0258|consen 240 IICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVK 319 (475)
T ss_pred HHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHH
Confidence 999999999999999998655554321211 11112 112333332 46778988 3567885 22 33333
Q ss_pred HHHHhc-CCceeecC---------CCcHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEE
Q 011567 333 DHQRLS-SSGYVFSA---------SLPPYLASAAITAIDVL-EENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIV 401 (483)
Q Consensus 333 ~~~~~~-~~~~~fs~---------~~~p~~~aaa~~al~~l-~~~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~ 401 (483)
+.+... +...+-.. -.||.- +....+.. .+.+.+.+.++++++.+.+.+++++|+.+... ++.+.
T Consensus 320 ~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~P---gd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~-qGAMY 395 (475)
T KOG0258|consen 320 QQIKKLASIKLCPQVSGQKLVDLVVNPPKP---GDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPV-QGAMY 395 (475)
T ss_pred HHHHHHHhhhhcCCccchhhhceecCCCCC---CCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccC-cccee
Confidence 332111 00000000 001100 01111111 12246888899999999999999999988754 55554
Q ss_pred EE-EecCCCCCchhhHHH----HHHHHHHHHHhCCEEEEeecccccccCCCCCc---eEEEccCCCCHHHHHHHHHHHHH
Q 011567 402 FL-ILEKSTGSMKNDLQL----LEDIADWALKEDGVFVVTSKRSMLDKCRLPVG---IRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 402 ~l-~l~~~~~~~~~~~~~----~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~---lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
.+ ++.-+....+..... -.-.+.++|+..||.+.|+....- ++| +|.++=+. . + ..++.+++
T Consensus 396 ~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ-----~~GtyH~R~TiLp~---~-~-~~i~~~~~ 465 (475)
T KOG0258|consen 396 LFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQ-----KEGTYHFRTTILPP---G-L-EIIEKFKK 465 (475)
T ss_pred ecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCC-----CCceeEEEEeecCc---h-h-HHHHHHHH
Confidence 44 221111000000000 012456788889999998765432 233 78765322 2 3 55666666
Q ss_pred HHHHHHhc
Q 011567 474 ISAVVLRD 481 (483)
Q Consensus 474 ~~~~~~~~ 481 (483)
+=++.+.+
T Consensus 466 fH~~f~~~ 473 (475)
T KOG0258|consen 466 FHAEFMDE 473 (475)
T ss_pred HHHHHHHh
Confidence 65555544
No 383
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.92 E-value=2.7e-07 Score=93.62 Aligned_cols=303 Identities=16% Similarity=0.169 Sum_probs=180.5
Q ss_pred cChHHHHHHHHHHHhhhCCCCEEEe-cccHHH---HHhhhhhhc-----cCCcEEEEcCCchhHHHhHhhhcCCeEEEec
Q 011567 151 GTIDVHLDCEARIAKFLGTPDSILY-SYGLST---MFSAIPCFC-----KKGDLIVADEGVHWGIQNGLYLSRSTVVYFK 221 (483)
Q Consensus 151 g~~~~~~~l~~~La~~~g~e~~i~~-~sG~~a---~~~ai~~~~-----~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~ 221 (483)
|..++..+|++.|++..|.+..-+- ++|.+. -..+|+++. +...+-+.+-+.|+.-....++.|.+++.+.
T Consensus 579 GY~~lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~ 658 (1001)
T KOG2040|consen 579 GYQQLFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVG 658 (1001)
T ss_pred hHHHHHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEee
Confidence 4456778999999999999876665 788654 345577764 2234677888999998888899999998876
Q ss_pred CC-----CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC-hHHHHHHHHHcCcEEEEeCccccccccCCCCc
Q 011567 222 HN-----DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP-LDELIRLKEKYRFRVFLDESNSFGVLGRSGRG 295 (483)
Q Consensus 222 ~~-----d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~-L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g 295 (483)
.. |+.+|+...+++.++ .+++++.-... .|...+ +++++++.++||--+.+|.+.--...|-+..|
T Consensus 659 ~~~~G~id~~dLk~kaekh~~~-------Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pG 730 (1001)
T KOG2040|consen 659 CDANGNIDMVDLKAKAEKHKDN-------LAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPG 730 (1001)
T ss_pred ccCCCCccHHHHHHHHHHhhhh-------hheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCccceecccCCc
Confidence 32 899999888887765 56665543333 377666 99999999999999999998643223321111
Q ss_pred cccccCCCCCceeEEEccccccccC---CCceeeccHHHHHHHHhc-------------CCceeecCCCcHHH----HHH
Q 011567 296 LTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLS-------------SSGYVFSASLPPYL----ASA 355 (483)
Q Consensus 296 ~~~~~~v~~~~~Di~~~s~~K~lg~---~GG~i~~~~~~~~~~~~~-------------~~~~~fs~~~~p~~----~aa 355 (483)
.+|- |+.--.++|+|+. .||=-+|+=-+-.|+..+ ...-.-+-+..|+. ...
T Consensus 731 ---d~Ga-----DV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpI 802 (1001)
T KOG2040|consen 731 ---DIGA-----DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPI 802 (1001)
T ss_pred ---cccc-----cceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehh
Confidence 1232 5555589999962 122222222222222111 00000111111222 222
Q ss_pred HHHHHHHHhcC--cHHHHHHHHHHHHHHHhhccCCCceee-cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCE
Q 011567 356 AITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIA-SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGV 432 (483)
Q Consensus 356 a~~al~~l~~~--~~~~~~l~~~~~~l~~~L~~~~~~~i~-~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv 432 (483)
..+-++.+-.. ++.-+-..-|+.|+.++|+.. +++. ....+.+-|-.+-+..+.+....-.+.+++++++ ++|+
T Consensus 803 SwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~-DYgF 879 (1001)
T KOG2040|consen 803 SWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLM-DYGF 879 (1001)
T ss_pred HHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--cceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHH-hccC
Confidence 23344544321 222233344677888999764 4432 2333433322221111111111123557888754 5788
Q ss_pred EEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 011567 433 FVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 433 ~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
......+|. ++.|-|-|+-.-+++|+|++++++-.+-.++
T Consensus 880 HaPTmswPV------~gtLMIEPTESE~k~ElDRfcdAliSIreEI 919 (1001)
T KOG2040|consen 880 HAPTMSWPV------AGTLMIEPTESEDKAELDRFCDALISIREEI 919 (1001)
T ss_pred CCCcccccc------CCceEeccCccccHHHHHHHHHHHHHHHHHH
Confidence 876666653 4558899998899999999999987665443
No 384
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.85 E-value=2.6e-06 Score=81.27 Aligned_cols=347 Identities=19% Similarity=0.231 Sum_probs=189.3
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhh
Q 011567 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIP 187 (483)
Q Consensus 108 G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~ 187 (483)
+.-+||+.+-+--|-..+ .-..++-+..-...|+|.+ ..|++...+.+|.+..+-...|-.|=...++
T Consensus 45 edv~IDLLTDSGTgams~-----~qwaamm~GDEAYagsrs~-------~~L~~avkdifGfq~~iPthQGRgAE~Il~~ 112 (471)
T COG3033 45 EDVFIDLLTDSGTGAMTD-----KQWAAMMRGDEAYAGSRSY-------YALADAVKDIFGFQYTIPTHQGRGAENILIP 112 (471)
T ss_pred cceEEEeeccCCcccccH-----HHHHHHhccchhhcccccH-------HHHHHHHHHhcCceeeeeccCCccHHHHHHH
Confidence 346788887543343222 2222333322334455544 4688899999998888888888766444444
Q ss_pred hhcc-----CCcEEEEcCCchhHHHhH-hhhcCCeEE--------------EecCC-CHHHHHHHHHHhhhhhhhccCcc
Q 011567 188 CFCK-----KGDLIVADEGVHWGIQNG-LYLSRSTVV--------------YFKHN-DMDSLRNTLERVTADNKRAKKLR 246 (483)
Q Consensus 188 ~~~~-----~gdiI~~~~~~h~s~~~g-~~~s~~~v~--------------~~~~~-d~~~Le~~l~~~~~~~~~~~~~~ 246 (483)
.+.+ +|...+....+|+.+..+ .+..|+..+ .|+-| |++.|++++.+...+ .+
T Consensus 113 i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~------nv 186 (471)
T COG3033 113 ILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGAD------NV 186 (471)
T ss_pred HHhhhccccCCccccccccceecchhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcc------cC
Confidence 4443 444455556667654443 444554432 22222 889999999987765 34
Q ss_pred EEEEEe-cccCCCCCccC---hHHHHHHHHHcCcEEEEeCccc----cccccCCCCccccccCCC------CCceeEEEc
Q 011567 247 RYIVVE-AVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNS----FGVLGRSGRGLTEHCGVP------VDKIDIVTA 312 (483)
Q Consensus 247 ~~iv~e-~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s----~g~lg~~G~g~~~~~~v~------~~~~Di~~~ 312 (483)
.+|++. ..++.+|.... ++++.++|+||++.++.|.+.- .++ -..-.|.- ++.+. -.-.|-.+-
T Consensus 187 p~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFI-k~rE~gYr-d~sI~~IarEm~sYaD~~~m 264 (471)
T COG3033 187 PYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFI-KQREPGYR-DWSIEEIAREMYSYADGCTM 264 (471)
T ss_pred cEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhh-hhcCcccc-cccHHHHHHHHHhhhhhhee
Confidence 444332 33344565443 7999999999999999998631 111 11111110 01110 001133333
Q ss_pred cccc-cccCCCceeeccHH----HHHHHHhcC---Cce-eecCCCcHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHh
Q 011567 313 AMGH-ALATEGGFCTGSAR----VVDHQRLSS---SGY-VFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTG 383 (483)
Q Consensus 313 s~~K-~lg~~GG~i~~~~~----~~~~~~~~~---~~~-~fs~~~~p~~~aaa~~al~~l~~~~~~~~~l~~~~~~l~~~ 383 (483)
|.-| ++...|||++-+++ +...++... -++ +|+ ++..-.+.+....|..--+.+ .+++--+..++|.++
T Consensus 265 S~KKD~lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYG-gl~GrdmealAvGL~e~~~~~-yl~~Rv~Qv~YL~~~ 342 (471)
T COG3033 265 SAKKDGLVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYG-GLAGRDMEALAVGLREGVNFD-YLAHRVAQVQYLADG 342 (471)
T ss_pred eccccceeccccEEEecCccHHHHHHHHHhheEeeccccccC-cccchhHHHHHHHHHHhcCcH-HHHHHHHHHHHHHHH
Confidence 3333 33467899876554 444444321 111 222 222222222222333222223 444445567889999
Q ss_pred hccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeeccccc------ccCCCCC--ceEEEc
Q 011567 384 LSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML------DKCRLPV--GIRLFV 455 (483)
Q Consensus 384 L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~------~~~~~~~--~lRi~~ 455 (483)
|.+. |++++.+.++.-+++....-......+.--++.++.++.++.||-..-...... ++..+|+ -+|+++
T Consensus 343 l~~~-GVpi~~paGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRlti 421 (471)
T COG3033 343 LEEA-GVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTI 421 (471)
T ss_pred HHhc-CCeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEec
Confidence 9886 999887777887777643211111122223456666677777886653322111 1111222 399987
Q ss_pred cC-CCCHHHHHHHHHHHHHHHHH
Q 011567 456 SA-AHSEADLVKACESLKRISAV 477 (483)
Q Consensus 456 ~~-~~t~edi~~~~~~l~~~~~~ 477 (483)
+- ..|.+++|.++++++++.+.
T Consensus 422 pRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 422 PRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred cccccchhHHHHHHHHHHHHHhc
Confidence 65 56999999999999887654
No 385
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.78 E-value=1.7e-06 Score=94.07 Aligned_cols=309 Identities=15% Similarity=0.126 Sum_probs=175.0
Q ss_pred EEEeecCCCCCCCCChHHH-HHHHH---HHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCC--CEEEecccHHHHHh
Q 011567 111 VVNFASANYLGLIGHEKLL-ESCTS---ALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFS 184 (483)
Q Consensus 111 ~id~~s~~~lG~~~~p~i~-~a~~~---~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e--~~i~~~sG~~a~~~ 184 (483)
+..|....|.++ --|.++ +.+.+ .+..|. ...|-..-|+.+...++...+++++|.+ .+=++..++++-++
T Consensus 80 ~~~fiG~G~y~~-~~P~vi~~~i~~~~~~yTaYT--PYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA 156 (954)
T PRK12566 80 WTSLIGMGYHGT-VTPTVILRNVLENPGWYTAYT--PYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEA 156 (954)
T ss_pred ccccccccccCC-cCcHHHHHHHHhCchhhhcCC--CCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHH
Confidence 445555556666 334443 44432 122231 1122224456667788999999999988 66788777655443
Q ss_pred hh---hhhccCCcEEEEcCCchhHHHhHhh----hcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCC
Q 011567 185 AI---PCFCKKGDLIVADEGVHWGIQNGLY----LSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQN 257 (483)
Q Consensus 185 ai---~~~~~~gdiI~~~~~~h~s~~~g~~----~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~ 257 (483)
+. +...++...+++++..|..+..-++ ..|.+++. +++++.+.+ .++.|++..+. .
T Consensus 157 ~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~------~~~~~~~~~----------~~~~v~vq~P~-~ 219 (954)
T PRK12566 157 MALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV------DAVDNLAAH----------AVFGALLQYPD-T 219 (954)
T ss_pred HHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE------cchhhcCCC----------CEEEEEEECCC-C
Confidence 33 3222235678899999988765443 34455553 344443211 25666664433 3
Q ss_pred CCCccChHHHHHHHHHcCcEEEEe-CccccccccCCCCccccccCCCCCceeEEEcccccccc-------CCCceeeccH
Q 011567 258 SGQIAPLDELIRLKEKYRFRVFLD-ESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA-------TEGGFCTGSA 329 (483)
Q Consensus 258 ~G~i~~L~~l~~l~~k~~~~li~D-Ea~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg-------~~GG~i~~~~ 329 (483)
.|.+.++++|.+++++.|.++++- +..+.+.+-+-| .+| .||++| -++.|| +..||++.++
T Consensus 220 ~G~i~d~~~i~~~~h~~gal~~~~~d~laL~ll~~Pg-----e~G-----ADI~vG-~~Q~fGvp~~~GGP~ag~~a~~~ 288 (954)
T PRK12566 220 HGEIRDLRPLIDQLHGQQALACVAADLLSLLVLTPPG-----ELG-----ADVVLG-STQRFGVPMGYGGPHAAYFACRD 288 (954)
T ss_pred ceEEccHHHHHHHHHHcCCEEEEEeCHHHHhCCCChh-----hcC-----CcEEee-CCCcCCCCCCCCCCCeeeeeehH
Confidence 499999999999999999987643 234555443211 233 388876 355554 1237888877
Q ss_pred HHHHHHHhc----------CCceeec------------CC----CcHHHHHHHHHHHHHHhcC----cHHHHHHHHHHHH
Q 011567 330 RVVDHQRLS----------SSGYVFS------------AS----LPPYLASAAITAIDVLEEN----PDLITKLKKNTAI 379 (483)
Q Consensus 330 ~~~~~~~~~----------~~~~~fs------------~~----~~p~~~aaa~~al~~l~~~----~~~~~~l~~~~~~ 379 (483)
+++..+... ..+|.-+ ++ .+..++|.+ +++-..-.. .++-++...++.+
T Consensus 289 ~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~-a~~Y~~~~Gp~Gl~~ia~~~~~~a~~ 367 (954)
T PRK12566 289 DYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANI-AGFYAVYHGPEGLKRIAQRVHRLTAI 367 (954)
T ss_pred HHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHH-HHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 765553110 1111000 00 122222222 122211112 2345567778889
Q ss_pred HHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCC
Q 011567 380 LRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAH 459 (483)
Q Consensus 380 l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~ 459 (483)
+.+.|.+ .|+++... ..+--+.+.- +. ...++..++++ .|+.++.... ..+.+++.-.+
T Consensus 368 l~~~l~~-~g~~~~~~--~fF~~~~v~~--~~------~~~~~~~~a~~-~~~n~r~~~~---------~~~~~s~de~~ 426 (954)
T PRK12566 368 LAAGLEA-KGIKRLNR--HFFDTLTLEV--GG------AQAAIIESAEA-ARINLRILGR---------GRLGVSLDETC 426 (954)
T ss_pred HHHHHHh-cCCccccC--CccceEEEEc--cC------CHHHHHHHHHH-CCCeeEEeCC---------CeEEEEeCCCC
Confidence 9999988 58887533 2232233321 10 13356666665 4898876421 23789999999
Q ss_pred CHHHHHHHHHHHH
Q 011567 460 SEADLVKACESLK 472 (483)
Q Consensus 460 t~edi~~~~~~l~ 472 (483)
|++|++.+++++.
T Consensus 427 ~~~~~~~~~~~f~ 439 (954)
T PRK12566 427 DEATVARLFDIFL 439 (954)
T ss_pred CHHHHHHHHHHhc
Confidence 9999999999984
No 386
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.62 E-value=4.4e-06 Score=77.84 Aligned_cols=244 Identities=16% Similarity=0.214 Sum_probs=138.0
Q ss_pred cccChH-HHHHHHHHHHhhhCCCCEEE---ecccHHHHHhhhhhhccCCcEEEEcCC-chhHHHhHhhhc----------
Q 011567 149 FYGTID-VHLDCEARIAKFLGTPDSIL---YSYGLSTMFSAIPCFCKKGDLIVADEG-VHWGIQNGLYLS---------- 213 (483)
Q Consensus 149 ~~g~~~-~~~~l~~~La~~~g~e~~i~---~~sG~~a~~~ai~~~~~~gdiI~~~~~-~h~s~~~g~~~s---------- 213 (483)
-||..| -...|++-.|+.||.|.+++ +-||+.|+..|+-.+.++||.++.--. -+....+-+-+.
T Consensus 59 GYGydD~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~df 138 (416)
T COG4100 59 GYGYDDLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDF 138 (416)
T ss_pred CCCccccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHh
Confidence 367666 56779999999999998765 489999999999999999997764322 232332222111
Q ss_pred CCeEEEec--CC---CHHHHHHHHHHhhhhhhhccCccEEEEEecc--cC--CCCCccChHHHHHHHHHc--CcEEEEeC
Q 011567 214 RSTVVYFK--HN---DMDSLRNTLERVTADNKRAKKLRRYIVVEAV--YQ--NSGQIAPLDELIRLKEKY--RFRVFLDE 282 (483)
Q Consensus 214 ~~~v~~~~--~~---d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v--~~--~~G~i~~L~~l~~l~~k~--~~~li~DE 282 (483)
+.....++ .+ |.+.++..+. + .+++|-+.-- |. ++=.+..+++++++.++- ++++++|.
T Consensus 139 gi~Y~~v~Lt~~gkiD~~~v~~~i~---~-------~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDN 208 (416)
T COG4100 139 GIKYKAVPLTADGKIDIQAVKTAIS---D-------RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDN 208 (416)
T ss_pred CcceeecccccCCcccHHHHHHhcC---c-------cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEec
Confidence 11112222 11 5555555443 3 3677766432 11 111223367777777765 79999999
Q ss_pred ccccccccCCCCccccccCCCCCceeEEEcccccccc----CCCceeeccHHHHHHHHhcCCceeecCCCcHHHHHHHHH
Q 011567 283 SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA----TEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAIT 358 (483)
Q Consensus 283 a~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg----~~GG~i~~~~~~~~~~~~~~~~~~fs~~~~p~~~aaa~~ 358 (483)
+|+.++--. |-.. -.+|++.||+-|..| ..|||++|++++++... |.-++..-.--+.|.+-
T Consensus 209 CYGEFvE~~------EPt~---vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~-----yRlTaPGIG~e~Gat~~ 274 (416)
T COG4100 209 CYGEFVEEK------EPTH---VGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAA-----YRLTAPGIGREGGATLY 274 (416)
T ss_pred cchhhhhcc------Cccc---cchhhhccceeeCCCCceeeccceeechHHHHHhhc-----eeeecCCccccccccHH
Confidence 997654211 1111 234999999999997 35899999999998742 22221100001111222
Q ss_pred HHHHH-hc---CcHHHHHHHHHHHHHHHhhccCCCceeecCCCC----CEEEEEecCCCCCchhhHHHHHHHHHH
Q 011567 359 AIDVL-EE---NPDLITKLKKNTAILRTGLSDIHGLSIASNPES----PIVFLILEKSTGSMKNDLQLLEDIADW 425 (483)
Q Consensus 359 al~~l-~~---~~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~----~i~~l~l~~~~~~~~~~~~~~~~i~~~ 425 (483)
++..+ +. -|....+..+-+......|.++ |+++.+.... -+..+.+. +.+.+-.+++.
T Consensus 275 ~l~~myqGlFlAPhvv~qa~Kga~fta~~le~l-g~~~~P~~~~kRtDlIQavkf~--------~~eKmIaFcqa 340 (416)
T COG4100 275 SLREMYQGLFLAPHVVSQAVKGAHFTARFLEKL-GFPVNPKYDAKRTDLIQAVKFG--------SKEKMIAFCQA 340 (416)
T ss_pred HHHHHHhhhccchHHHHHHhhhhHHHHHHHHHc-CCCCCCcccccccchhhheecC--------CHHHHHHHHHH
Confidence 22222 21 2455555554444444555555 7776543332 25556653 33445556653
No 387
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.47 E-value=5.8e-05 Score=72.90 Aligned_cols=321 Identities=16% Similarity=0.186 Sum_probs=176.6
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHHHhc-CCCCC----CCCCcccChHHHHHHHHHHHhhhCCCC--EEEe-cccH-HH
Q 011567 111 VVNFASANYLGLIGHEKLLESCTSALEKY-GVGSC----GPRGFYGTIDVHLDCEARIAKFLGTPD--SILY-SYGL-ST 181 (483)
Q Consensus 111 ~id~~s~~~lG~~~~p~i~~a~~~~l~~~-g~g~~----~~~~~~g~~~~~~~l~~~La~~~g~e~--~i~~-~sG~-~a 181 (483)
..||+++-. .-+|++.+.+.+-+..+ |.|.+ +.|.-. -..++.+.++.+.++++.++ -|+| .+|. ..
T Consensus 6 ~~nFsaGPa---~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~-~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~q 81 (365)
T COG1932 6 VYNFSAGPA---ALPPEVLQQAQKELLDWNGLGMSVMEISHRSKE-FKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQ 81 (365)
T ss_pred CCCCCCCcc---cCCHHHHHHHHHHHhhhccCCcceeeeccccHH-HHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHH
Confidence 456666411 13577777777766653 32211 111111 12477888999999998653 4444 4443 44
Q ss_pred HHhhhhhhcc-CCc-EEEEcCCchhHHHhHhhhcC-CeE-----EEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEec
Q 011567 182 MFSAIPCFCK-KGD-LIVADEGVHWGIQNGLYLSR-STV-----VYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEA 253 (483)
Q Consensus 182 ~~~ai~~~~~-~gd-iI~~~~~~h~s~~~g~~~s~-~~v-----~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~ 253 (483)
...+...+.+ ++. .|..-.-..++...+-.... .++ ...++...-++...- ..+ ..+.|...+
T Consensus 82 f~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~-------~~ayv~~~~ 152 (365)
T COG1932 82 FAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSD-------NDAYVHFCW 152 (365)
T ss_pred HHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCC-------CccEEEEec
Confidence 4444444443 332 34433333334433333332 111 111111111111100 110 134455555
Q ss_pred ccCCCCCccC-hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-ceeeccHHH
Q 011567 254 VYQNSGQIAP-LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARV 331 (483)
Q Consensus 254 v~~~~G~i~~-L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G-G~i~~~~~~ 331 (483)
.-..+|.-.| ++.+. . +.++++|-+-.+ +++ .++-.+.|++.++--|.+|+.| +.++-++++
T Consensus 153 NeTi~Gv~v~~~p~~~---~--~~~~v~D~SS~i--lsr---------~iDvsk~dviyagaQKnlGpaGltvvIvr~~~ 216 (365)
T COG1932 153 NETISGVEVPELPDIG---S--DGLLVADASSAI--LSR---------PIDVSKYDVIYAGAQKNLGPAGLTVVIVRPDL 216 (365)
T ss_pred CCcccceEccCCCCCC---C--CceEEEecccHH--hcC---------CCChhHcceEEEehhhccCccceEEEEEcHHH
Confidence 4445566544 23221 1 178999987654 332 2334667999999999999888 556677777
Q ss_pred HHHHHhc------------CCceeecCCCcHHHHHHHHHHHHHHhcC---cHHHHHHHHHHHHHHHhhccCCCce--eec
Q 011567 332 VDHQRLS------------SSGYVFSASLPPYLASAAITAIDVLEEN---PDLITKLKKNTAILRTGLSDIHGLS--IAS 394 (483)
Q Consensus 332 ~~~~~~~------------~~~~~fs~~~~p~~~aaa~~al~~l~~~---~~~~~~l~~~~~~l~~~L~~~~~~~--i~~ 394 (483)
+++.+.. ..+-+|.+ +|.++......++++++.. +.+.++.+++.+.|.+.+.+.+-+. +..
T Consensus 217 l~r~~~~~~P~if~y~~~~~~~s~yNT-Pptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~ 295 (365)
T COG1932 217 LERAESYTLPSIFDYLTHADNGSMYNT-PPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAK 295 (365)
T ss_pred HhcccccCCchHhhchhhhccCCccCC-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccch
Confidence 7665432 11122332 2334444555678888753 5788889999999999998753221 222
Q ss_pred CCCCCE-EEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHH
Q 011567 395 NPESPI-VFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 473 (483)
Q Consensus 395 ~~~~~i-~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 473 (483)
..+|.+ +++.+. +.+....++.++.++ |+..-.++. .++|+|+++...+..++++.+++.++.
T Consensus 296 ~~RS~mnV~f~~~--------~~~ld~~fv~eae~~-gl~~lkGhr-------~vgGmRasiynA~~~e~veaL~~fm~~ 359 (365)
T COG1932 296 ANRSRMNVTFTLV--------DAELDKGFVAEAEAA-GLIYLKGHR-------SVGGLRASIYNAVPLEDVEALTDFMDW 359 (365)
T ss_pred hhccceeEEEEcC--------cHHHHHHHHHHHHHc-CCceecccc-------CCCceeeeeecCCCHHHHHHHHHHHHH
Confidence 234443 455553 334445677765554 555544321 247799999999999999999999988
Q ss_pred HHHH
Q 011567 474 ISAV 477 (483)
Q Consensus 474 ~~~~ 477 (483)
+.++
T Consensus 360 f~~~ 363 (365)
T COG1932 360 FEET 363 (365)
T ss_pred HHHh
Confidence 7654
No 388
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.34 E-value=0.00015 Score=68.01 Aligned_cols=329 Identities=18% Similarity=0.233 Sum_probs=182.9
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCCC-CCcccChH---HHHHHHHHHHhhhCCC-CEE-EecccHH
Q 011567 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGP-RGFYGTID---VHLDCEARIAKFLGTP-DSI-LYSYGLS 180 (483)
Q Consensus 107 ~G~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~~-~~~~g~~~---~~~~l~~~La~~~g~e-~~i-~~~sG~~ 180 (483)
+.+..|=++ +|.||+ .+....+.+.+.++++.- |+. ..+.|..+ .-+-.-..++...|.. +.+ ++++=+.
T Consensus 64 ~d~~~iYlc-GNSLGL-mPK~t~~~~~~eLDkWak--~av~gH~~GkvPW~~~De~il~l~~~iVGA~e~EvavmNsLTv 139 (465)
T KOG3846|consen 64 DDKPVIYLC-GNSLGL-MPKSTRNSINAELDKWAK--CAVEGHFKGKVPWVSIDEPILPLLAPIVGAQENEVAVMNSLTV 139 (465)
T ss_pred CCCCeEEEe-cccccc-CchhhHhHHHHHHHHHHh--hhhhcccccccceeecchhhhhhhhhhccCCchhhhhHhhhhh
Confidence 345555555 467899 456667777777776321 000 00222222 1233445677777753 333 3444443
Q ss_pred HHHhhhhhhccCC---cEEEEcC----CchhHHHhHhhhcCCeE----EEecCC------CHHHHHHHHHHhhhhhhhcc
Q 011567 181 TMFSAIPCFCKKG---DLIVADE----GVHWGIQNGLYLSRSTV----VYFKHN------DMDSLRNTLERVTADNKRAK 243 (483)
Q Consensus 181 a~~~ai~~~~~~g---diI~~~~----~~h~s~~~g~~~s~~~v----~~~~~~------d~~~Le~~l~~~~~~~~~~~ 243 (483)
-+.+.+-.|-|+. -.|+.+. +.|+++..-+++.|..+ +-++.. ..+|+-+.+++..++
T Consensus 140 Nlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDe----- 214 (465)
T KOG3846|consen 140 NLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDE----- 214 (465)
T ss_pred HHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCe-----
Confidence 3344455554432 2344433 34666766677766543 112111 234444555554443
Q ss_pred CccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cccCCCCCceeEEEcccccccc---
Q 011567 244 KLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EHCGVPVDKIDIVTAAMGHALA--- 319 (483)
Q Consensus 244 ~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~~~v~~~~~Di~~~s~~K~lg--- 319 (483)
.++|...+++--+|...++.+|-+.-+..|+++=.|=+|++|-.. +. ..+| +|+.+-+--|-+.
T Consensus 215 --iA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVp-----L~LHdWg-----VDFACWCSYKYlnaGa 282 (465)
T KOG3846|consen 215 --IALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVP-----LQLHDWG-----VDFACWCSYKYLNAGA 282 (465)
T ss_pred --EEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCc-----eEEeecC-----CceEEEeeecccccCC
Confidence 899999999999999999999997777779999999999876543 22 1233 4888877788873
Q ss_pred -CCCceeeccHH-------HHHHH--------------HhcCCceeecCCCcHHHHH-HHHHHHHHHhcCcHHHHHHHHH
Q 011567 320 -TEGGFCTGSAR-------VVDHQ--------------RLSSSGYVFSASLPPYLAS-AAITAIDVLEENPDLITKLKKN 376 (483)
Q Consensus 320 -~~GG~i~~~~~-------~~~~~--------------~~~~~~~~fs~~~~p~~~a-aa~~al~~l~~~~~~~~~l~~~ 376 (483)
+.||..+..+. +.-++ ..-.....|..+.||.... +...+|++..+- .++.++++
T Consensus 283 GgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~--~~~~lRkr 360 (465)
T KOG3846|consen 283 GGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQF--NINELRKR 360 (465)
T ss_pred CccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHh--hHHHHhhh
Confidence 33454333222 11111 1111222344555666655 445678877653 24455544
Q ss_pred HHHH----HHhhccCCCce-----------eec----CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEee
Q 011567 377 TAIL----RTGLSDIHGLS-----------IAS----NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTS 437 (483)
Q Consensus 377 ~~~l----~~~L~~~~~~~-----------i~~----~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~ 437 (483)
.-++ .-.++...|.. +.. +.++.-+.+.+..+. .++.++ |.++|+.+...
T Consensus 361 S~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp~----------~~vfqe-L~krGv~~DkR 429 (465)
T KOG3846|consen 361 SLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSPT----------PKVFQE-LHKRGVIGDKR 429 (465)
T ss_pred hhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCCc----------hHHHHH-HHHcCeecccc
Confidence 4333 22233222221 111 122334444443321 245665 56679877532
Q ss_pred cccccccCCCCCceEEEc-cCCCCHHHHHHHHHHHHHHHHHH
Q 011567 438 KRSMLDKCRLPVGIRLFV-SAAHSEADLVKACESLKRISAVV 478 (483)
Q Consensus 438 ~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~~ 478 (483)
+ |..||++| +...|-.|+-.++++|.+++..+
T Consensus 430 -~--------PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~ 462 (465)
T KOG3846|consen 430 -R--------PNVIRVAPVPLYNTFSDVYIFVNALNEAMDKL 462 (465)
T ss_pred -C--------CCceEeecchhhccHHHHHHHHHHHHHHHHHh
Confidence 2 45699965 78899999999999999988765
No 389
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.04 E-value=0.0011 Score=62.47 Aligned_cols=274 Identities=12% Similarity=0.093 Sum_probs=146.7
Q ss_pred EEecccHHHHHhhhh---hhccCCcEEEEcCCchhHHHhHhhhcC-CeEEEecCCC----HHHHHHHHHHhhhhhhhccC
Q 011567 173 ILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSR-STVVYFKHND----MDSLRNTLERVTADNKRAKK 244 (483)
Q Consensus 173 i~~~sG~~a~~~ai~---~~~~~gdiI~~~~~~h~s~~~g~~~s~-~~v~~~~~~d----~~~Le~~l~~~~~~~~~~~~ 244 (483)
+-.-||+.|+..+.. .+.. ...|+++.+.......-+.-.| .++..+++=| --++|..|..... +|.
T Consensus 103 vQslsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~----APe 177 (410)
T KOG1412|consen 103 VQSLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLES----APE 177 (410)
T ss_pred eeeccccchhhhhHHHHHHhcc-cceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhh----CCC
Confidence 445678878776643 3333 4458888887666555555555 3443333211 1134444443322 122
Q ss_pred ccEEEEEecccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCccc-cccCCCCCceeEEEccccccccC
Q 011567 245 LRRYIVVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT-EHCGVPVDKIDIVTAAMGHALAT 320 (483)
Q Consensus 245 ~~~~iv~e~v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~-~~~~v~~~~~Di~~~s~~K~lg~ 320 (483)
...+|+-...++++|.-+. +.+|++.-++.+.+-+.|-+|-++.-|.--+-.. -.+.++...--+++-||+|.+|.
T Consensus 178 ~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGl 257 (410)
T KOG1412|consen 178 GSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGL 257 (410)
T ss_pred CcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhccc
Confidence 2344444445888875333 7889999999999999999987666665333221 11223211114778999999985
Q ss_pred CC---c---eeeccHHHHHHHH----hcCCceeecCCCcHHHHHHHHHHHHHH---h----cCcHHHHHHHHHHHHHHHh
Q 011567 321 EG---G---FCTGSARVVDHQR----LSSSGYVFSASLPPYLASAAITAIDVL---E----ENPDLITKLKKNTAILRTG 383 (483)
Q Consensus 321 ~G---G---~i~~~~~~~~~~~----~~~~~~~fs~~~~p~~~aaa~~al~~l---~----~~~~~~~~l~~~~~~l~~~ 383 (483)
-+ | +++.++.++..+. .-... .+| .+|.+.+..+.+.|+-- + ....+-.++.+++..|++.
T Consensus 258 YneRvGnltvv~~n~a~i~~v~SQl~lviR~-~~S-NPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~ 335 (410)
T KOG1412|consen 258 YNERVGNLTVVVNNPAVIAGVKSQLTLVIRS-NWS-NPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDH 335 (410)
T ss_pred ccccccceEEEecChhHHHHHHHHHHHHHhh-ccC-CCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 3 2344444433221 11111 122 22444444444444211 1 1123445666667777777
Q ss_pred hccC--CC-ceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCC
Q 011567 384 LSDI--HG-LSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHS 460 (483)
Q Consensus 384 L~~~--~~-~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t 460 (483)
|..+ || +.-.. .+..++.+.-- ...-++.+.+++.|++...+ ||+++. ++
T Consensus 336 L~aL~TPGtWDHI~-~QiGMFSyTGL------------tp~qV~~li~~h~vyLl~~G-------------RInisG-LN 388 (410)
T KOG1412|consen 336 LVALKTPGTWDHIT-QQIGMFSYTGL------------TPAQVDHLIENHKVYLLSDG-------------RINISG-LN 388 (410)
T ss_pred HHhcCCCCcHHHHH-hhccceeecCC------------CHHHHHHHHHhceEEEecCC-------------cEeeec-cc
Confidence 7665 22 11111 12333333210 11235666777788886542 565543 67
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 011567 461 EADLVKACESLKRISAVVLR 480 (483)
Q Consensus 461 ~edi~~~~~~l~~~~~~~~~ 480 (483)
...+|.+..+|.++++.+-.
T Consensus 389 ~~NveyVAkAIde~Vr~~~~ 408 (410)
T KOG1412|consen 389 MKNVEYVAKAIDETVRAIKS 408 (410)
T ss_pred cccHHHHHHHHHHHHHhhcc
Confidence 78999999999999987643
No 390
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.42 E-value=0.0081 Score=55.47 Aligned_cols=161 Identities=8% Similarity=0.131 Sum_probs=88.3
Q ss_pred HHHHHHHHHHhhhC---CCCEEEe--cccHHHHHh--hhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC-----
Q 011567 155 VHLDCEARIAKFLG---TPDSILY--SYGLSTMFS--AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH----- 222 (483)
Q Consensus 155 ~~~~l~~~La~~~g---~e~~i~~--~sG~~a~~~--ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~----- 222 (483)
+..++....-.+.| ...++++ .+|.+-... .++.-..+-+.|+-.+-...+..+.+--.|-+.+.+..
T Consensus 58 isne~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d 137 (432)
T KOG3843|consen 58 ISNEFAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGD 137 (432)
T ss_pred HHHHHHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccch
Confidence 34566666666666 3567666 555432221 12222223456666555555555555555554433321
Q ss_pred ---CCHHHHHHHHHHhhhhhhhccCccEEEEEecccC-CCC-CccChHHHHHHHHHcCcEEEEeCccccccccCCCCccc
Q 011567 223 ---NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQ-NSG-QIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT 297 (483)
Q Consensus 223 ---~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~-~~G-~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~ 297 (483)
.|++.+++++++..++ .+..+....+ -.. ....+++|..+|..|++.-|+..+|+.-. ..+-+-..
T Consensus 138 ~l~tdleav~~~iee~g~d--------cilci~sttscfapr~pd~leaiaaica~~diphivnnayglqs-ee~i~~ia 208 (432)
T KOG3843|consen 138 ELITDLEAVEAIIEELGED--------CILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQS-EECIHKIA 208 (432)
T ss_pred HHHHhHHHHHHHHHHhCCc--------eEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccch-HHHHHHHH
Confidence 2677777888776654 2222221111 111 11229999999999999999999986421 00001111
Q ss_pred cccCCCCCceeEEEcccccccc-CCCceee
Q 011567 298 EHCGVPVDKIDIVTAAMGHALA-TEGGFCT 326 (483)
Q Consensus 298 ~~~~v~~~~~Di~~~s~~K~lg-~~GG~i~ 326 (483)
....+ ..+|-++-|+-|.|- +.||.++
T Consensus 209 a~~~~--grida~vqsldknf~vpvggaii 236 (432)
T KOG3843|consen 209 AAAEC--GRIDAFVQSLDKNFMVPVGGAII 236 (432)
T ss_pred HHhhh--ccHHHHHHHhhhcceeecchhHh
Confidence 11122 456888889999995 5677653
No 391
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.27 E-value=0.056 Score=56.13 Aligned_cols=270 Identities=17% Similarity=0.169 Sum_probs=141.5
Q ss_pred HHHHHHHHhhhCCC--CEEEecccHHHHHhhhhhh--ccCCcEEEEcCCchhHHHhHhhh--cCCeEEEecCCCHHHHHH
Q 011567 157 LDCEARIAKFLGTP--DSILYSYGLSTMFSAIPCF--CKKGDLIVADEGVHWGIQNGLYL--SRSTVVYFKHNDMDSLRN 230 (483)
Q Consensus 157 ~~l~~~La~~~g~e--~~i~~~sG~~a~~~ai~~~--~~~gdiI~~~~~~h~s~~~g~~~--s~~~v~~~~~~d~~~Le~ 230 (483)
......++++.|.+ .+-+..-|++|-++...++ .|++ .+++|..+|.-+...++- .+..+. +...|+++...
T Consensus 166 lNyQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krk-k~vvd~~~hpqtlsV~~TRa~~~~i~-v~~~~~~~~~~ 243 (1001)
T KOG2040|consen 166 LNYQTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRK-KFVVDSNCHPQTLSVVKTRAKGFGIK-VVVSDIKEADY 243 (1001)
T ss_pred hhhHHhhhhccCCcccchhhhccchhHHHHHHHHHhhcccc-eEEecCCCCcchhhhhhcccccccee-EEecCHHHhhc
Confidence 34455677887754 5667777776655444332 2343 488899999877665542 111111 22223322211
Q ss_pred HHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEe-CccccccccCCCCccccccCCCCCceeE
Q 011567 231 TLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLD-ESNSFGVLGRSGRGLTEHCGVPVDKIDI 309 (483)
Q Consensus 231 ~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~D-Ea~s~g~lg~~G~g~~~~~~v~~~~~Di 309 (483)
.. +.+.-|++.-.-. .|.+.+..++++++++.|.++++- +-.+.-.+-+ ..+||. ||
T Consensus 244 s~-----------~~v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLrp-----PgefGa-----DI 301 (1001)
T KOG2040|consen 244 SS-----------KDVSGVLVQYPDT-EGSVLDFDELVELAHANGSLVVMATDLLALTILRP-----PGEFGA-----DI 301 (1001)
T ss_pred cc-----------cceeEEEEEcCCC-CCcccCHHHHHHHhhccCceEEEeehhhHHHccCC-----hhhcCc-----ee
Confidence 11 1255566654433 499999999999999999887654 2223222321 123443 88
Q ss_pred EEccccccccC-------CCceeeccHHHHHHHHhcCCce----------------------eecCCCcHHHHHHHHHHH
Q 011567 310 VTAAMGHALAT-------EGGFCTGSARVVDHQRLSSSGY----------------------VFSASLPPYLASAAITAI 360 (483)
Q Consensus 310 ~~~s~~K~lg~-------~GG~i~~~~~~~~~~~~~~~~~----------------------~fs~~~~p~~~aaa~~al 360 (483)
.+|| +.-||. ..||.+.++++...+...-.+. .--++.|--.+.|.++.+
T Consensus 302 avGS-sQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANm 380 (1001)
T KOG2040|consen 302 AVGS-SQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANM 380 (1001)
T ss_pred eecc-ccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHH
Confidence 8876 334441 1256554444432221000000 000111222222333322
Q ss_pred HHH---hcC----cHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEE
Q 011567 361 DVL---EEN----PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVF 433 (483)
Q Consensus 361 ~~l---~~~----~~~~~~l~~~~~~l~~~L~~~~~~~i~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~ 433 (483)
..+ -.. .++-+++......|..+|+.. |.++.-..---.+.++++. .+.++.++++++ +|-
T Consensus 381 aAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~~k~fFDTLkI~~~~----------s~~~~l~rA~~~-~iN 448 (1001)
T KOG2040|consen 381 AAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQHKPFFDTLKIRCGC----------SAEEVLDRAAKR-QIN 448 (1001)
T ss_pred HHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhccccccceEEEEecC----------cHHHHHHHHHhh-cCc
Confidence 211 122 245556666677788888764 6666533222234445532 133566666665 576
Q ss_pred EEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHH
Q 011567 434 VVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 472 (483)
Q Consensus 434 v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~ 472 (483)
++.... ..|-+++--..+++|+|.++.++.
T Consensus 449 lr~~ed---------~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 449 LRLVED---------GTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred eEEeec---------CceEEeecccccHHHHHHHHHHHc
Confidence 654322 227788888899999999999886
No 392
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=97.24 E-value=0.027 Score=54.55 Aligned_cols=271 Identities=15% Similarity=0.183 Sum_probs=132.7
Q ss_pred HHHHHHHHHHhhh---C----CCCEEEecccH-HHHHhhhhhhc------cCCcEEEEcCCchhHHHhHhhhcCCeEEEe
Q 011567 155 VHLDCEARIAKFL---G----TPDSILYSYGL-STMFSAIPCFC------KKGDLIVADEGVHWGIQNGLYLSRSTVVYF 220 (483)
Q Consensus 155 ~~~~l~~~La~~~---g----~e~~i~~~sG~-~a~~~ai~~~~------~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~ 220 (483)
+..+|++.|.++. | ...-|++.+|+ +-+.+|+-+++ .+.-.|+...+|+.++..-...-.+....+
T Consensus 44 ~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w 123 (363)
T PF04864_consen 44 ISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKW 123 (363)
T ss_dssp S-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEE
T ss_pred ccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccc
Confidence 4566776666664 4 24678887775 54555554443 233468888999888776555544444444
Q ss_pred cCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCcccccc
Q 011567 221 KHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHC 300 (483)
Q Consensus 221 ~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~ 300 (483)
.- |..... ..... ..-+=++..++|+.|.+-. .+.+.-+..+|.|=+|=. .||
T Consensus 124 ~G-da~~~~---~~~~~-------~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYYW-----------Phy 176 (363)
T PF04864_consen 124 AG-DASNFK---NSDNP-------SPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYYW-----------PHY 176 (363)
T ss_dssp EE-ECCCGT---T-S-C-------CGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-S-----------TTT
T ss_pred cc-cHHhhc---cCCCC-------CCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeeec-----------ccc
Confidence 32 111111 11001 1233344455666665421 123455677899988632 122
Q ss_pred C-C-CCCceeEEEccccccccCCC---ceee-ccHHHHHH----HHhcCCceeecCCCcHHHHHHHHHHHHHHhc-Cc--
Q 011567 301 G-V-PVDKIDIVTAAMGHALATEG---GFCT-GSARVVDH----QRLSSSGYVFSASLPPYLASAAITAIDVLEE-NP-- 367 (483)
Q Consensus 301 ~-v-~~~~~Di~~~s~~K~lg~~G---G~i~-~~~~~~~~----~~~~~~~~~fs~~~~p~~~aaa~~al~~l~~-~~-- 367 (483)
- + .|.+=||+++|+||.-|-.| ||.+ .++++.+. +..+..|- + --...-+.+.|+.+.+ ..
T Consensus 177 TpI~~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGv----S--~dsQLRa~kiLk~v~~~~~~~ 250 (363)
T PF04864_consen 177 TPITAPADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGV----S--RDSQLRALKILKVVLDGYGTE 250 (363)
T ss_dssp S---S-B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--------HHHHHHHHHHHHHHHHHCCHH
T ss_pred cccCCCCCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccC----c--HHHHHHHHHHHHHHHhcccCC
Confidence 1 1 12344999999999998555 8854 44555443 33333221 1 1111112222222211 10
Q ss_pred --------HHHHHHHHHHHHHHHhhccCCCceeec-------------CCCCCEEEEEecCCCCCchhhHHHHHHHHHHH
Q 011567 368 --------DLITKLKKNTAILRTGLSDIHGLSIAS-------------NPESPIVFLILEKSTGSMKNDLQLLEDIADWA 426 (483)
Q Consensus 368 --------~~~~~l~~~~~~l~~~L~~~~~~~i~~-------------~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~ 426 (483)
--.+.++++-+.|++.+..-.-+.+.. .+...+-+++...+. +.| |...
T Consensus 251 ~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~ee---d~D-------C~~~ 320 (363)
T PF04864_consen 251 KGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREE---DED-------CYAV 320 (363)
T ss_dssp TTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCG---GSS-------HHHH
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcc---ccc-------HHHH
Confidence 124566777788888886643333221 123446777775321 111 4557
Q ss_pred HHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHH
Q 011567 427 LKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474 (483)
Q Consensus 427 l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 474 (483)
|++.||+.+.+.....+ +.-+|+++ ..++++.|.+++.|...
T Consensus 321 l~~~~I~tr~G~~fga~----~ryVRlSm--l~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 321 LREAKIITRSGVLFGAD----SRYVRLSM--LKRDDDFDQLLERLSKL 362 (363)
T ss_dssp HHCTTEEEEEGGGGTS-----TTEEEEES--SS-HHHHHHHHHHHHCC
T ss_pred HHhCCcccCCCCccCCC----CCeEEEec--cCCHHHHHHHHHHHHhh
Confidence 88889999877554331 12289876 47999999999988753
No 393
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=97.19 E-value=0.038 Score=51.75 Aligned_cols=318 Identities=19% Similarity=0.223 Sum_probs=161.3
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCC----CCCcccChHHHHHHHHHHHhhhCCCC--EEEe--cccHH
Q 011567 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCG----PRGFYGTIDVHLDCEARIAKFLGTPD--SILY--SYGLS 180 (483)
Q Consensus 109 ~~~id~~s~~~lG~~~~p~i~~a~~~~l~~~g~g~~~----~~~~~g~~~~~~~l~~~La~~~g~e~--~i~~--~sG~~ 180 (483)
++++||+.+- --+ +++-+.++-++.+.--|.|-+- .|.- --..++.+-+..+.+++..++ .++| .+|+.
T Consensus 6 ~~vvnFaaGP-Akl-p~~VL~e~qkdl~n~~g~GisV~EmSHRsk-~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~ 82 (370)
T KOG2790|consen 6 ERVVNFAAGP-AKL-PESVLLEAQKDLLNFNGSGISVMEMSHRSK-DFAKIINDTESLLRELLNIPDNYKVLFLQGGGTG 82 (370)
T ss_pred cceeecCCCc-ccC-CHHHHHHHHHHhhccCCCcceEEEecccch-hHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcc
Confidence 4688998761 122 4455556655655544443211 1110 012467788888999988653 4444 33332
Q ss_pred HHHhhhh-hhc--cC---CcEEEEcCCchhHHHhHhhhcCCeEEEec--------CCCHHHHHHHHHHhhhhhhhccCcc
Q 011567 181 TMFSAIP-CFC--KK---GDLIVADEGVHWGIQNGLYLSRSTVVYFK--------HNDMDSLRNTLERVTADNKRAKKLR 246 (483)
Q Consensus 181 a~~~ai~-~~~--~~---gdiI~~~~~~h~s~~~g~~~s~~~v~~~~--------~~d~~~Le~~l~~~~~~~~~~~~~~ 246 (483)
-.+|++ .+. +. -|.|++..-.--+.-++-+......+.++ ..|.+.++... + ..
T Consensus 83 -qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~~-----d------a~ 150 (370)
T KOG2790|consen 83 -QFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELNP-----D------AS 150 (370)
T ss_pred -cccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhcccCC-----C------cc
Confidence 222221 122 33 35666655444344444444433333222 12444443211 1 11
Q ss_pred EEEEE--ecccCCCCCccC-hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEccccccccCCC-
Q 011567 247 RYIVV--EAVYQNSGQIAP-LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG- 322 (483)
Q Consensus 247 ~~iv~--e~v~~~~G~i~~-L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg~~G- 322 (483)
-+..+ |.+. |.-.+ ++ +-.-+|..+++|-+.-| +.+ .+++ .+.+++++.--|.+|+.|
T Consensus 151 yvyyCaNETVH---GVEf~~~P----~~~~~~~vlVaDmSSnf--lSr-------pvDv--sk~gvi~aGAQKN~G~aG~ 212 (370)
T KOG2790|consen 151 YVYYCANETVH---GVEFDFIP----VNDPKGAVLVADMSSNF--LSR-------PVDV--SKFGVIFAGAQKNVGPAGV 212 (370)
T ss_pred EEEEecCceee---ceecCCCC----CCCCCCceEEEecccch--hcC-------Cccc--hhcceEEeccccccCcccc
Confidence 22222 2233 32221 22 22346889999976554 332 2333 344677778899998777
Q ss_pred -ceeeccHHHH-HHHHhcCCce----------eecCCCcHHHHHHHHHHHHHHhcC---cHHHHHHHHHHHHHHHhhccC
Q 011567 323 -GFCTGSARVV-DHQRLSSSGY----------VFSASLPPYLASAAITAIDVLEEN---PDLITKLKKNTAILRTGLSDI 387 (483)
Q Consensus 323 -G~i~~~~~~~-~~~~~~~~~~----------~fs~~~~p~~~aaa~~al~~l~~~---~~~~~~l~~~~~~l~~~L~~~ 387 (483)
.+++ +++++ .++......+ .|.+ +|-+..-+.--.++++.+. ..+.+...++.+.+.+.+.+.
T Consensus 213 Tvviv-r~dllg~~~~~tP~v~dyk~~~~NnSlyNT-pP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s 290 (370)
T KOG2790|consen 213 TVVIV-RKDLLGNALDITPSVLDYKIMDKNNSLYNT-PPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNS 290 (370)
T ss_pred EEEEE-ehhhhcccccCCccccceeeeccccccccC-CCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhc
Confidence 3343 33333 2222111111 1111 2333333344466766543 245555677888999999887
Q ss_pred CCceeec---CCCCCE-EEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHH
Q 011567 388 HGLSIAS---NPESPI-VFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEAD 463 (483)
Q Consensus 388 ~~~~i~~---~~~~~i-~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ed 463 (483)
.|+-..+ ..+|-+ +++++++ ..+-.++.+++.+++ ..-..+ +.+ -+|||-++...+|-++
T Consensus 291 ~gfy~cpVe~~~RS~MNV~Fri~~--------d~Le~eFLkeA~~~~-mv~LKG-hRS------VGGiRASlYNAisv~~ 354 (370)
T KOG2790|consen 291 NGFYRCPVEPSVRSRMNVPFRIEK--------DELEAEFLKEAAKEH-MVQLKG-HRS------VGGIRASLYNAISVEE 354 (370)
T ss_pred CCeEEcccchhhhhhcccceeecc--------hHHHHHHHHHHHHhh-hhcccc-ccc------cccchhhhhccccHHH
Confidence 6754332 223332 4556642 222335566655553 322222 222 2679999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 011567 464 LVKACESLKRISAV 477 (483)
Q Consensus 464 i~~~~~~l~~~~~~ 477 (483)
++++++-++++.+.
T Consensus 355 ~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 355 VQKLAAFMKEFQKK 368 (370)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999887653
No 394
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=97.09 E-value=0.0075 Score=57.88 Aligned_cols=262 Identities=12% Similarity=0.144 Sum_probs=138.4
Q ss_pred cccHHHHHhhh---hhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHH----HHHHHHHHhhhhhhhccCccEE
Q 011567 176 SYGLSTMFSAI---PCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMD----SLRNTLERVTADNKRAKKLRRY 248 (483)
Q Consensus 176 ~sG~~a~~~ai---~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~----~Le~~l~~~~~~~~~~~~~~~~ 248 (483)
-||+.|+..+. ..|. ++..|+.+.+..+...+.....|..+..+++-|++ +++..++.... .|.. .+
T Consensus 127 lSGTGaLriga~Fl~~f~-~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~----~p~g-s~ 200 (427)
T KOG1411|consen 127 LSGTGALRVGAEFLARFY-PSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGE----APEG-SI 200 (427)
T ss_pred ccCcchhhHHHHHHHhhc-cccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhc----CCCC-cE
Confidence 56666655442 2333 47788889988888777888888887777665433 23334443322 1212 34
Q ss_pred EEEec-ccCCCCCccC---hHHHHHHHHHcCcEEEEeCccccccccCCCCcc--ccccCCCCCceeEEEccccccccCCC
Q 011567 249 IVVEA-VYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGL--TEHCGVPVDKIDIVTAAMGHALATEG 322 (483)
Q Consensus 249 iv~e~-v~~~~G~i~~---L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~--~~~~~v~~~~~Di~~~s~~K~lg~~G 322 (483)
|+... ..+++|.-+- +++|+++-++.+.+-++|-+|-++..|.--+-. ..+|--+ ..--++.-|++|.+|.-|
T Consensus 201 ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~-g~~~~laQSyAKNMGLYg 279 (427)
T KOG1411|consen 201 ILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVED-GHEILLAQSYAKNMGLYG 279 (427)
T ss_pred EEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHc-CCceEeehhhhhhcchhh
Confidence 44444 4566765332 789999999999999999998765555321111 1111111 111356789999999654
Q ss_pred ----ce--eeccHHHH----HHHHhcCCceeecCCCcHHHHHHHHH-HHH-------HHhcCcHHHHHHHHHHHHHHHhh
Q 011567 323 ----GF--CTGSARVV----DHQRLSSSGYVFSASLPPYLASAAIT-AID-------VLEENPDLITKLKKNTAILRTGL 384 (483)
Q Consensus 323 ----G~--i~~~~~~~----~~~~~~~~~~~fs~~~~p~~~aaa~~-al~-------~l~~~~~~~~~l~~~~~~l~~~L 384 (483)
.+ ++.+.+.. .+++.-..+ .||. ||+--|-..+ .|. ++.+...+.+++..++..|.+.|
T Consensus 280 ERvGa~svvc~~ad~A~rV~SQlk~liRp-mYSn--PP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L 356 (427)
T KOG1411|consen 280 ERVGALSVVCKDADEAKRVESQLKILIRP-MYSN--PPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDAL 356 (427)
T ss_pred hccceeEEEecCHHHHHHHHHHHHHHhcc-cccC--CCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHh
Confidence 33 23343332 223332223 3443 3433322211 111 11112234556666666666666
Q ss_pred ccCCCcee----ecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCC
Q 011567 385 SDIHGLSI----ASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHS 460 (483)
Q Consensus 385 ~~~~~~~i----~~~~~~~i~~l~l~~~~~~~~~~~~~~~~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t 460 (483)
... |-+. ... +-.++++.--+ + +-++.+.++.-|+++.. -||+++. .+
T Consensus 357 ~~~-gs~~~W~hI~~-QIGMF~fTgl~--------p----eQv~~l~ke~~iYmT~d-------------GRiS~aG-~s 408 (427)
T KOG1411|consen 357 EKE-GSPGNWSHITK-QIGMFCFTGLN--------P----EQVDWLTKEYHIYLTKD-------------GRISMAG-LS 408 (427)
T ss_pred hcC-CCCccHHHHHH-hhheeeecCCC--------H----HHHHHHHhhheeeeccC-------------ceEeecc-cc
Confidence 553 2211 111 22244443111 1 22455556667777643 3677643 56
Q ss_pred HHHHHHHHHHHHHHH
Q 011567 461 EADLVKACESLKRIS 475 (483)
Q Consensus 461 ~edi~~~~~~l~~~~ 475 (483)
...++++.++|..+.
T Consensus 409 s~nV~yLa~aih~vt 423 (427)
T KOG1411|consen 409 SSNVPYLADAIHAVT 423 (427)
T ss_pred ccCCcccchhhHhHh
Confidence 677777777776554
No 395
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=95.42 E-value=0.075 Score=46.22 Aligned_cols=55 Identities=13% Similarity=0.067 Sum_probs=39.6
Q ss_pred ccChHHHHHHHHHHHhhhC--C----CCEEEecccHHHHHhhhhhhccCCcEEEEcCCchh
Q 011567 150 YGTIDVHLDCEARIAKFLG--T----PDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHW 204 (483)
Q Consensus 150 ~g~~~~~~~l~~~La~~~g--~----e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~ 204 (483)
.|...+...+++.+.+.+| . ++.++.+++++++..++.+++.+||.|+++.+++.
T Consensus 92 ~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 92 HGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 4555566666666666555 1 24445566678899999999999999999998874
No 396
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=86.41 E-value=16 Score=34.43 Aligned_cols=59 Identities=15% Similarity=0.207 Sum_probs=40.3
Q ss_pred CHHHHHHHHHHhhhhhhhccCccEEEEEe-cccCCCCC---ccChHHHHHHHHHcCcEEEEeCccccc
Q 011567 224 DMDSLRNTLERVTADNKRAKKLRRYIVVE-AVYQNSGQ---IAPLDELIRLKEKYRFRVFLDESNSFG 287 (483)
Q Consensus 224 d~~~Le~~l~~~~~~~~~~~~~~~~iv~e-~v~~~~G~---i~~L~~l~~l~~k~~~~li~DEa~s~g 287 (483)
++++++..++..... ....++++| ++++-.-. ..+|..|..+++++++.+|+|-+|+.|
T Consensus 134 t~~e~~~A~e~i~~~-----Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G 196 (250)
T PRK13397 134 TIEEYLGALSYLQDT-----GKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTG 196 (250)
T ss_pred CHHHHHHHHHHHHHc-----CCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCc
Confidence 556666655554432 135688888 65332111 556889999999999999999999855
No 397
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=85.37 E-value=15 Score=36.53 Aligned_cols=81 Identities=16% Similarity=0.192 Sum_probs=52.1
Q ss_pred CchhHHHhHhhhcCCeEEEec---CCCHHHHHHHHHHhhhhhhhccCccEEEEEec---cc--CCCCCccChHHHHHHHH
Q 011567 201 GVHWGIQNGLYLSRSTVVYFK---HNDMDSLRNTLERVTADNKRAKKLRRYIVVEA---VY--QNSGQIAPLDELIRLKE 272 (483)
Q Consensus 201 ~~h~s~~~g~~~s~~~v~~~~---~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~---v~--~~~G~i~~L~~l~~l~~ 272 (483)
..++.+.+.+.-.+..+ .++ ..+++++....+..... ....++++|- .| ..+-...+|..|..+++
T Consensus 195 ~~n~~LL~~va~t~kPV-llk~G~~~t~ee~~~A~e~i~~~-----Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~ 268 (352)
T PRK13396 195 MQNFSLLKKVGAQDKPV-LLKRGMAATIDEWLMAAEYILAA-----GNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRS 268 (352)
T ss_pred ccCHHHHHHHHccCCeE-EEeCCCCCCHHHHHHHHHHHHHc-----CCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHH
Confidence 34556666665555444 333 22677777666665432 1246888876 22 11235567999999999
Q ss_pred HcCcEEEEeCccccc
Q 011567 273 KYRFRVFLDESNSFG 287 (483)
Q Consensus 273 k~~~~li~DEa~s~g 287 (483)
.+++.+|+|-+|+.|
T Consensus 269 ~~~lPVi~DpsH~~G 283 (352)
T PRK13396 269 LTHLPIMIDPSHGTG 283 (352)
T ss_pred hhCCCEEECCcccCC
Confidence 999999999999864
No 398
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=81.44 E-value=25 Score=35.26 Aligned_cols=83 Identities=12% Similarity=0.165 Sum_probs=54.2
Q ss_pred CCchhHHHhHhhhcCCeEEEec--CCCHHHHHHHHHHhhhhhhhccCccEEEEEe-cccCC--C-CCccChHHHHHHHHH
Q 011567 200 EGVHWGIQNGLYLSRSTVVYFK--HNDMDSLRNTLERVTADNKRAKKLRRYIVVE-AVYQN--S-GQIAPLDELIRLKEK 273 (483)
Q Consensus 200 ~~~h~s~~~g~~~s~~~v~~~~--~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e-~v~~~--~-G~i~~L~~l~~l~~k 273 (483)
...+..+...+.-.+..+..=. +.++++++..++..... ....+++++ ++.+- . -.-.+|..|..+.++
T Consensus 211 ~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~-----Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~ 285 (360)
T PRK12595 211 NMQNFELLKAAGRVNKPVLLKRGLSATIEEFIYAAEYIMSQ-----GNGQIILCERGIRTYEKATRNTLDISAVPILKQE 285 (360)
T ss_pred cccCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHHHHHC-----CCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHH
Confidence 3455666666665555554322 24778887777665432 124588888 55431 1 222479999999999
Q ss_pred cCcEEEEeCccccc
Q 011567 274 YRFRVFLDESNSFG 287 (483)
Q Consensus 274 ~~~~li~DEa~s~g 287 (483)
+++.+++|-.|+.|
T Consensus 286 ~~~PV~~d~~Hs~G 299 (360)
T PRK12595 286 THLPVMVDVTHSTG 299 (360)
T ss_pred hCCCEEEeCCCCCc
Confidence 99999999999854
No 399
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=75.95 E-value=48 Score=31.52 Aligned_cols=81 Identities=12% Similarity=0.170 Sum_probs=50.7
Q ss_pred chhHHHhHhhhcCCeEEEec-CC-CHHHHHHHHHHhhhhhhhccCccEEEEEec-ccC---CCCCccChHHHHHHHHHcC
Q 011567 202 VHWGIQNGLYLSRSTVVYFK-HN-DMDSLRNTLERVTADNKRAKKLRRYIVVEA-VYQ---NSGQIAPLDELIRLKEKYR 275 (483)
Q Consensus 202 ~h~s~~~g~~~s~~~v~~~~-~~-d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~-v~~---~~G~i~~L~~l~~l~~k~~ 275 (483)
.+..+...+.-.+..+..=. .. ++++++..++..... ....+++++- +.+ ..-...+|..|..++++++
T Consensus 120 ~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~-----Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~ 194 (260)
T TIGR01361 120 QNFELLKEVGKQGKPVLLKRGMGNTIEEWLYAAEYILSS-----GNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETH 194 (260)
T ss_pred cCHHHHHHHhcCCCcEEEeCCCCCCHHHHHHHHHHHHHc-----CCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhC
Confidence 44455555555554443222 12 677777777665432 1235777774 422 1223456999999999999
Q ss_pred cEEEEeCccccc
Q 011567 276 FRVFLDESNSFG 287 (483)
Q Consensus 276 ~~li~DEa~s~g 287 (483)
+.+++|-.|+.|
T Consensus 195 ~pV~~ds~Hs~G 206 (260)
T TIGR01361 195 LPIIVDPSHAAG 206 (260)
T ss_pred CCEEEcCCCCCC
Confidence 999999999865
No 400
>smart00642 Aamy Alpha-amylase domain.
Probab=70.47 E-value=10 Score=33.46 Aligned_cols=25 Identities=20% Similarity=0.287 Sum_probs=21.0
Q ss_pred CccChHHHHHHHHHcCcEEEEeCcc
Q 011567 260 QIAPLDELIRLKEKYRFRVFLDESN 284 (483)
Q Consensus 260 ~i~~L~~l~~l~~k~~~~li~DEa~ 284 (483)
...+++++++-|+++|+.+|+|=+.
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECC
Confidence 3344899999999999999999874
No 401
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=53.12 E-value=1.3e+02 Score=30.53 Aligned_cols=57 Identities=16% Similarity=0.419 Sum_probs=40.0
Q ss_pred CeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCC---C-----CCccC----hHHHHHHHHHcCcEEEE
Q 011567 215 STVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQN---S-----GQIAP----LDELIRLKEKYRFRVFL 280 (483)
Q Consensus 215 ~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~---~-----G~i~~----L~~l~~l~~k~~~~li~ 280 (483)
..+..+...|++++.+.+++.. ..++|+++++.. . |.+.- -.+|.++++++|+.+++
T Consensus 147 ~~l~l~aEt~~e~I~~~l~~~~---------p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 147 NNLYLLAETNLEDIIAELEQEK---------PDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred cceEEehhcCHHHHHHHHHhcC---------CCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 4566677778888888877643 568999887643 2 22222 47799999999987654
No 402
>PLN02672 methionine S-methyltransferase
Probab=51.20 E-value=62 Score=37.35 Aligned_cols=119 Identities=13% Similarity=0.186 Sum_probs=68.2
Q ss_pred HHHHHHHHHhhhC--------CCCEEEecccHHHHHhhhhhhccCCcEEE--EcCCchhHHHhHhhhcC----------C
Q 011567 156 HLDCEARIAKFLG--------TPDSILYSYGLSTMFSAIPCFCKKGDLIV--ADEGVHWGIQNGLYLSR----------S 215 (483)
Q Consensus 156 ~~~l~~~La~~~g--------~e~~i~~~sG~~a~~~ai~~~~~~gdiI~--~~~~~h~s~~~g~~~s~----------~ 215 (483)
...++..+|.|+. .++++++.+-..|++.+++.|.-+=-+|= ..+.-+.....++...+ .
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (1082)
T PLN02672 428 SKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLPKKWLTSLAIENATSDSKSDDVI 507 (1082)
T ss_pred chHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCCHHHHhHhhhhcccccCccCCeE
Confidence 3567777887764 35788889999999999988764322111 11111222222222221 2
Q ss_pred eEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCcc
Q 011567 216 TVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESN 284 (483)
Q Consensus 216 ~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~ 284 (483)
+++.-++.. +.+.+++++.+. .+|++.-.....-....++.|.+.+++-|++|++|++-
T Consensus 508 ~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (1082)
T PLN02672 508 TVIEAPRQS-DLVIELIKKLKP---------QVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISD 566 (1082)
T ss_pred EEEeCCCcc-hHHHHHHHhCCC---------eEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhh
Confidence 333333332 345566666543 45555322222122234899999999999999999974
No 403
>PRK10906 DNA-binding transcriptional repressor GlpR; Provisional
Probab=50.43 E-value=2.2e+02 Score=26.80 Aligned_cols=119 Identities=8% Similarity=0.054 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCc-EEEEcCCchhHHHhHhhhcCCeEEEe----cCC-----
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGD-LIVADEGVHWGIQNGLYLSRSTVVYF----KHN----- 223 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gd-iI~~~~~~h~s~~~g~~~s~~~v~~~----~~~----- 223 (483)
+.-..+++..+++....+.++..+|+.+.. .++.+..+.+ .|++.......... ...+.+++.. .++
T Consensus 76 ~~K~~IA~~Aa~~I~~g~tIflD~GtT~~~-la~~L~~~~~ltVvTNsl~ia~~l~--~~~~~~villGG~~~~~~~~~~ 152 (252)
T PRK10906 76 EEKERIARKVASQIPNGATLFIDIGTTPEA-VAHALLNHSNLRIVTNNLNVANTLM--AKEDFRIILAGGELRSRDGGII 152 (252)
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCcHHHHH-HHHHhcCCCCcEEEECcHHHHHHHh--hCCCCEEEEECCEEecCCCccC
Confidence 445678888888889889999999987754 4444544334 44443322221111 1122333321 111
Q ss_pred CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHH-----cCcEEEEeCc
Q 011567 224 DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEK-----YRFRVFLDES 283 (483)
Q Consensus 224 d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k-----~~~~li~DEa 283 (483)
.... .+.++....+ .+|+-+.++....|...+-+.-++++++ ....+++|-+
T Consensus 153 G~~a-~~~l~~~~~d-------~afi~~~Gi~~~~G~t~~~~~ea~~k~~~~~~a~~~illaD~s 209 (252)
T PRK10906 153 GEAT-LDFISQFRLD-------FGILGISGIDSDGSLLEFDYHEVRTKRAIIENSRHVMLVVDHS 209 (252)
T ss_pred CHHH-HHHHHhccCC-------EEEEcCCEECCCCCcCCCCHHHHHHHHHHHHhcCcEEEEEccc
Confidence 1222 3445555543 7888888888777776663222222222 2568888864
No 404
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=46.01 E-value=2.9e+02 Score=27.39 Aligned_cols=80 Identities=15% Similarity=0.242 Sum_probs=49.8
Q ss_pred chhHHHhHhhhcCCeEEEecC---CCHHHHHHHHHHhhhhhhhccCccEEEEEec-c--cCC-CCCccChHHHHHHHHHc
Q 011567 202 VHWGIQNGLYLSRSTVVYFKH---NDMDSLRNTLERVTADNKRAKKLRRYIVVEA-V--YQN-SGQIAPLDELIRLKEKY 274 (483)
Q Consensus 202 ~h~s~~~g~~~s~~~v~~~~~---~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~-v--~~~-~G~i~~L~~l~~l~~k~ 274 (483)
.+......+.-.+..+ .++. .+++++....+..... ....+++++- + |.+ +-...+|..+..+.+.+
T Consensus 188 ~N~~LL~~va~~~kPV-iLk~G~~~ti~E~l~A~e~i~~~-----GN~~viL~erG~~tf~~~~~~~ldl~ai~~lk~~~ 261 (335)
T PRK08673 188 QNFDLLKEVGKTNKPV-LLKRGMSATIEEWLMAAEYILAE-----GNPNVILCERGIRTFETATRNTLDLSAVPVIKKLT 261 (335)
T ss_pred cCHHHHHHHHcCCCcE-EEeCCCCCCHHHHHHHHHHHHHc-----CCCeEEEEECCCCCCCCcChhhhhHHHHHHHHHhc
Confidence 4555555555555444 3332 2667766666555432 1345778874 3 322 23345689999999999
Q ss_pred CcEEEEeCccccc
Q 011567 275 RFRVFLDESNSFG 287 (483)
Q Consensus 275 ~~~li~DEa~s~g 287 (483)
+..+|+|-.|+.|
T Consensus 262 ~lPVi~d~sH~~G 274 (335)
T PRK08673 262 HLPVIVDPSHATG 274 (335)
T ss_pred CCCEEEeCCCCCc
Confidence 9999999999854
No 405
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=45.59 E-value=1.7e+02 Score=27.93 Aligned_cols=79 Identities=11% Similarity=0.235 Sum_probs=44.2
Q ss_pred hhHHHhHhhhcCCeEEEecCC---CHHHHHHHHHHhhhhhhhccCccEEEEEecc---cCCC-CCccChHHHHHHHHHcC
Q 011567 203 HWGIQNGLYLSRSTVVYFKHN---DMDSLRNTLERVTADNKRAKKLRRYIVVEAV---YQNS-GQIAPLDELIRLKEKYR 275 (483)
Q Consensus 203 h~s~~~g~~~s~~~v~~~~~~---d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v---~~~~-G~i~~L~~l~~l~~k~~ 275 (483)
+..+...+.-.+..+ .++.. +++++....+..... ....+++++-- +++. -...++..+..+.++++
T Consensus 123 n~~LL~~~a~~gkPV-~lk~G~~~s~~e~~~A~e~i~~~-----Gn~~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~ 196 (266)
T PRK13398 123 NFELLKEVGKTKKPI-LLKRGMSATLEEWLYAAEYIMSE-----GNENVVLCERGIRTFETYTRNTLDLAAVAVIKELSH 196 (266)
T ss_pred CHHHHHHHhcCCCcE-EEeCCCCCCHHHHHHHHHHHHhc-----CCCeEEEEECCCCCCCCCCHHHHHHHHHHHHHhccC
Confidence 344444444333333 33322 566666655554322 12346666642 2111 11234888888888889
Q ss_pred cEEEEeCccccc
Q 011567 276 FRVFLDESNSFG 287 (483)
Q Consensus 276 ~~li~DEa~s~g 287 (483)
..+++|-.|+.|
T Consensus 197 ~pV~~D~sHs~G 208 (266)
T PRK13398 197 LPIIVDPSHATG 208 (266)
T ss_pred CCEEEeCCCccc
Confidence 999999999864
No 406
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=43.48 E-value=2.9e+02 Score=27.11 Aligned_cols=142 Identities=18% Similarity=0.202 Sum_probs=77.7
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHH---Hh-cCCCCCCCCCcccChHHHHHHHHHHHhhhCC-CCEEEecccHHHHHhh
Q 011567 111 VVNFASANYLGLIGHEKLLESCTSAL---EK-YGVGSCGPRGFYGTIDVHLDCEARIAKFLGT-PDSILYSYGLSTMFSA 185 (483)
Q Consensus 111 ~id~~s~~~lG~~~~p~i~~a~~~~l---~~-~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~-e~~i~~~sG~~a~~~a 185 (483)
++-..+.+.+|| .+|+..+-..+.+ +. +-+-+..+-.+.| .-|-..|..+..++-. +..+++.+|.-....+
T Consensus 32 V~~A~~~~~lgh-~sPe~~qIm~~v~egikyVFkT~n~~tf~isg--sGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~ 108 (385)
T KOG2862|consen 32 VQEAMSRPSLGH-MSPEFVQIMDEVLEGIKYVFKTANAQTFVISG--SGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAA 108 (385)
T ss_pred HHHhhcCCcccc-CCHHHHHHHHHHHHHHHHHhccCCCceEEEec--CCcchHHHHHHhhcCCCCeEEEEEechHHHHHH
Confidence 334445578899 6777655444433 32 1111112222222 2345677788888764 4555668887554433
Q ss_pred --hhhhccCCcEEEEcCCchhH---HHhHhhhcCCeEEEecCCC-----HHHHHHHHHHhhhhhhhccCccEEEEEeccc
Q 011567 186 --IPCFCKKGDLIVADEGVHWG---IQNGLYLSRSTVVYFKHND-----MDSLRNTLERVTADNKRAKKLRRYIVVEAVY 255 (483)
Q Consensus 186 --i~~~~~~gdiI~~~~~~h~s---~~~g~~~s~~~v~~~~~~d-----~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~ 255 (483)
.+.+--+=|.|-.+-+-+.. +..++.....+.+.+.|+| ..++.+.+.+...+ ..++.+++++.
T Consensus 109 D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k------~~~lllVD~Va 182 (385)
T KOG2862|consen 109 DCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHK------HEALLLVDTVA 182 (385)
T ss_pred HHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhc------CCeEEEEechh
Confidence 23333333555444444433 4456666667777788876 23444444333322 36899999999
Q ss_pred CCCCCc
Q 011567 256 QNSGQI 261 (483)
Q Consensus 256 ~~~G~i 261 (483)
+-+|.-
T Consensus 183 Slggt~ 188 (385)
T KOG2862|consen 183 SLGGTE 188 (385)
T ss_pred hcCCcc
Confidence 887663
No 407
>PRK03892 ribonuclease P protein component 3; Provisional
Probab=40.81 E-value=2.2e+02 Score=26.04 Aligned_cols=41 Identities=17% Similarity=0.340 Sum_probs=27.9
Q ss_pred hHHHHHHHHHcCcEEEEeCccccccccCCCCccccccCCCCCceeEEEcccccccc
Q 011567 264 LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA 319 (483)
Q Consensus 264 L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg 319 (483)
+.++.+|++||++.+++=- +...++++. ...|++ +++..+|
T Consensus 155 ~r~~l~L~rKYd~P~VISS------------~A~s~~~lR-sPRdl~--aL~~~iG 195 (216)
T PRK03892 155 MMKAWQLVNKYKVPRFITS------------SAESKWEVR-GPRDLM--SLGINIG 195 (216)
T ss_pred HHHHHHHHHHcCCCEEEec------------CcchhccCC-CHHHHH--HHHHHhC
Confidence 7899999999999998631 233456664 344665 5666665
No 408
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=39.84 E-value=2.6e+02 Score=24.55 Aligned_cols=106 Identities=14% Similarity=0.072 Sum_probs=56.4
Q ss_pred HHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCc-hhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhh
Q 011567 160 EARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGV-HWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTAD 238 (483)
Q Consensus 160 ~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~-h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~ 238 (483)
.+.|.+.++.+=.-+-.|++.-+.+..++-...+.+-++.-.. ......-..+.+.++..+..++.++++..+.+...+
T Consensus 45 a~~lr~~~~iPVV~I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~~~~~ 124 (176)
T PF06506_consen 45 AELLRKHVSIPVVEIPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDIKIYPYDSEEEIEAAIKQAKAE 124 (176)
T ss_dssp HHHHHCC-SS-EEEE---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EEEEEEESSHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCEEEECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCceEEEEECCHHHHHHHHHHHHHc
Confidence 3444555544433444677666665555443333443332222 222344445667888888888999999988876554
Q ss_pred hhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCc
Q 011567 239 NKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDES 283 (483)
Q Consensus 239 ~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa 283 (483)
...+|+- . .-..++|+++|+.-+.-++
T Consensus 125 ------G~~viVG--------g----~~~~~~A~~~gl~~v~i~s 151 (176)
T PF06506_consen 125 ------GVDVIVG--------G----GVVCRLARKLGLPGVLIES 151 (176)
T ss_dssp ------T--EEEE--------S----HHHHHHHHHTTSEEEESS-
T ss_pred ------CCcEEEC--------C----HHHHHHHHHcCCcEEEEEe
Confidence 2334442 2 1236888999888776543
No 409
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=39.45 E-value=45 Score=30.14 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=29.6
Q ss_pred ccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEE
Q 011567 245 LRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFL 280 (483)
Q Consensus 245 ~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~ 280 (483)
..+.|++|=+.. .|.+..++++.++++|||+.+|.
T Consensus 156 ~Pa~VicEi~~~-dG~mar~~~~~~fa~~h~l~~it 190 (203)
T COG0108 156 KPAGVICEIMND-DGTMARLPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCcEEEEEEeCC-CccccChHHHHHHHHHcCCcEEE
Confidence 467888886554 79999999999999999998874
No 410
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=38.69 E-value=3.6e+02 Score=25.73 Aligned_cols=115 Identities=20% Similarity=0.197 Sum_probs=57.1
Q ss_pred HHHHHhhhCCCCEEEecccHHHHHhhhhhhccCC---cEEEEcCCchh-H--HHhHhhhcCCeEEEecCCCHHHHHHHHH
Q 011567 160 EARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKG---DLIVADEGVHW-G--IQNGLYLSRSTVVYFKHNDMDSLRNTLE 233 (483)
Q Consensus 160 ~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~g---diI~~~~~~h~-s--~~~g~~~s~~~v~~~~~~d~~~Le~~l~ 233 (483)
.+...+++...+.|+.-+-+.++..++....+.| .+++++...+. + +.+-+...|.++...+. ..+-..+.
T Consensus 98 ~~~~~~~I~~~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~~~gi~v~~i~d---~~~~~~m~ 174 (282)
T PF01008_consen 98 ADHASELINDGDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEGRLMAKELAEAGIPVTLIPD---SAVGYVMP 174 (282)
T ss_dssp HHHHHCCC-TTEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHHHTHHHHHHHTT-EEEEE-G---GGHHHHHH
T ss_pred HHHHHHhccCCeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhhhhHHHHhhhcceeEEEEec---hHHHHHHH
Confidence 3334444545555655444455555554433333 34555443332 2 23344455777766643 33444554
Q ss_pred HhhhhhhhccCccEEEEEecccCCCCCccC--hHHHHHHHHHcCcEEEEe-Cccc
Q 011567 234 RVTADNKRAKKLRRYIVVEAVYQNSGQIAP--LDELIRLKEKYRFRVFLD-ESNS 285 (483)
Q Consensus 234 ~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~--L~~l~~l~~k~~~~li~D-Ea~s 285 (483)
. .. ...++=.+.++.++|.+.. -..++-+|++|++.+++= |++-
T Consensus 175 ~-~v-------d~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~~~~~K 221 (282)
T PF01008_consen 175 R-DV-------DKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVLAESYK 221 (282)
T ss_dssp C-TE-------SEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE--GGG
T ss_pred H-hC-------CeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEEccccc
Confidence 4 11 2456667788888666555 477888899999998874 4443
No 411
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=36.99 E-value=1.3e+02 Score=24.78 Aligned_cols=50 Identities=16% Similarity=0.334 Sum_probs=32.1
Q ss_pred cCCCHHHHHHHHHHhhhhhhhccCccEEEEEecc-cCCCCCccChHHHHHHHHHcCcEEEE
Q 011567 221 KHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAV-YQNSGQIAPLDELIRLKEKYRFRVFL 280 (483)
Q Consensus 221 ~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v-~~~~G~i~~L~~l~~l~~k~~~~li~ 280 (483)
+..|.+.+.+.+++.... ..+.+++... +-. -.| ++++++|+++++.||.
T Consensus 54 ~~~~~~~~~~~i~~L~~~------~~agL~i~~~~~~~---~iP-~~~i~~A~~~~lPli~ 104 (123)
T PF07905_consen 54 RDDDEEELREFIRELAEK------GAAGLGIKTGRYLD---EIP-EEIIELADELGLPLIE 104 (123)
T ss_pred CCCCHHHHHHHHHHHHHC------CCeEEEEeccCccc---cCC-HHHHHHHHHcCCCEEE
Confidence 343566788888776543 3555555432 211 122 8999999999999875
No 412
>PRK09802 DNA-binding transcriptional regulator AgaR; Provisional
Probab=35.95 E-value=3.9e+02 Score=25.44 Aligned_cols=119 Identities=13% Similarity=0.095 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccC-CcEEEEcCCchhHHHhHhhhcCCeEEEe----cCC-----
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKK-GDLIVADEGVHWGIQNGLYLSRSTVVYF----KHN----- 223 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~-gdiI~~~~~~h~s~~~g~~~s~~~v~~~----~~~----- 223 (483)
+.-.++++..+++....+.|++.+|+.+.. .++.+... +-.|++.......... ...+.+++.. .++
T Consensus 91 ~~K~~IA~~Aa~~I~dgd~Ifld~GtT~~~-la~~L~~~~~ltVvTnsl~ia~~l~--~~~~~~v~llGG~~~~~~~~~~ 167 (269)
T PRK09802 91 AMKRSVAKAAVELIQPGHRVILDSGTTTFE-IARLMRKHTDVIAMTNGMNVANALL--EAEGVELLMTGGHLRRQSQSFY 167 (269)
T ss_pred HHHHHHHHHHHhhCCCCCEEEECCchHHHH-HHHhcCcCCCeEEEeCCHHHHHHHH--hCCCCEEEEECCEEecCCCceE
Confidence 445677888888888889999999987755 34444333 3355554433332221 1123333321 111
Q ss_pred CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHH----HHH-cCcEEEEeCc
Q 011567 224 DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRL----KEK-YRFRVFLDES 283 (483)
Q Consensus 224 d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l----~~k-~~~~li~DEa 283 (483)
... -.+.++....+ .+|+-+.++....|...+-..-+++ +++ ...++++|-.
T Consensus 168 G~~-a~~~l~~~~~d-------~afig~~gi~~~~G~t~~~~~ea~~kr~~i~~s~~~ill~D~s 224 (269)
T PRK09802 168 GDQ-AEQSLQNYHFD-------MLFLGVDAIDLERGVSTHNEDEARLNRRMCEVAERIIVVTDSS 224 (269)
T ss_pred CHH-HHHHHHhccCC-------EEEEcCceecCCCCcCCCCHHHHHHHHHHHHHcCcEEEEEecc
Confidence 122 23455555543 7888888887666766552221122 222 2568888864
No 413
>COG1349 GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]
Probab=35.47 E-value=3.9e+02 Score=25.21 Aligned_cols=119 Identities=12% Similarity=0.109 Sum_probs=65.7
Q ss_pred HHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCc-EEEEcCCchhHHHhHhhhcCCeEEE----ecCCC----H
Q 011567 155 VHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGD-LIVADEGVHWGIQNGLYLSRSTVVY----FKHND----M 225 (483)
Q Consensus 155 ~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gd-iI~~~~~~h~s~~~g~~~s~~~v~~----~~~~d----~ 225 (483)
.-.++++..+++....+.+++.+|+.+.. .++.+.+..+ .|++....+......- .+.+++. +..++ -
T Consensus 77 eK~~IA~~Aa~lI~~g~~ifld~GTT~~~-la~~L~~~~~ltviTNsl~ia~~l~~~--~~~~vi~~GG~~~~~~~~~~G 153 (253)
T COG1349 77 EKRAIAKAAATLIEDGDTIFLDAGTTTLA-LARALPDDNNLTVITNSLNIAAALLEK--PNIEVILLGGTVRKKSGSFVG 153 (253)
T ss_pred HHHHHHHHHHhhCCCCCEEEECCCcHHHH-HHHHhCcCCCeEEEeCCHHHHHHHHhC--CCCeEEEeCcEEEcCCCeEEc
Confidence 34567888888888888999999977644 4455554444 4444443333322211 1222211 11111 1
Q ss_pred HHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHH----HHH-cCcEEEEeCc
Q 011567 226 DSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRL----KEK-YRFRVFLDES 283 (483)
Q Consensus 226 ~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l----~~k-~~~~li~DEa 283 (483)
..-.+.++....+ .+|+-+.++....|...+-..-+++ ++. ...++++|-+
T Consensus 154 ~~a~~~l~~~~~d-------~aFig~~gi~~~~g~~~~~~~ea~~k~~~~~~a~~~~ll~D~s 209 (253)
T COG1349 154 PLAEEFLRQFNFD-------KAFIGADGIDLEGGLTTFNEEEAEVKRAMIEAAREVILLADSS 209 (253)
T ss_pred HHHHHHHHhCccc-------EEEEeccccCCCCCcCcCCHHHHHHHHHHHHhhCcEEEEEcCC
Confidence 2233455555543 7889899998777777663222222 222 3578889943
No 414
>TIGR03586 PseI pseudaminic acid synthase.
Probab=35.36 E-value=4.5e+02 Score=25.96 Aligned_cols=57 Identities=16% Similarity=0.376 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHhhhhhhhccCccEEEEEecc--cCCCCCccChHHHHHHHHHcCcEE-EEeCccccc
Q 011567 224 DMDSLRNTLERVTADNKRAKKLRRYIVVEAV--YQNSGQIAPLDELIRLKEKYRFRV-FLDESNSFG 287 (483)
Q Consensus 224 d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v--~~~~G~i~~L~~l~~l~~k~~~~l-i~DEa~s~g 287 (483)
++++++..++..... ....+++++.+ |...=.-.+|..|..+.+++++.+ +.| |+.|
T Consensus 145 t~~Ei~~Av~~i~~~-----g~~~i~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G 204 (327)
T TIGR03586 145 TLEEIQEAVEACREA-----GCKDLVLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGLSD--HTLG 204 (327)
T ss_pred CHHHHHHHHHHHHHC-----CCCcEEEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEeeC--CCCc
Confidence 556666666554322 11246665543 322222334999999999999888 667 6644
No 415
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=34.10 E-value=2.1e+02 Score=26.17 Aligned_cols=76 Identities=16% Similarity=0.109 Sum_probs=45.8
Q ss_pred cEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHH
Q 011567 194 DLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEK 273 (483)
Q Consensus 194 diI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k 273 (483)
.+....+.........++..|.+++..+.+|.+.|++.++... +++++-+... .....--..+++.|++
T Consensus 24 ~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d----------~v~~~~~~~~-~~~~~~~~~li~Aa~~ 92 (233)
T PF05368_consen 24 SVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVD----------AVFSVTPPSH-PSELEQQKNLIDAAKA 92 (233)
T ss_dssp CEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCS----------EEEEESSCSC-CCHHHHHHHHHHHHHH
T ss_pred CcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCc----------eEEeecCcch-hhhhhhhhhHHHhhhc
Confidence 4545555555455556666788888888889999988887432 3344433222 1222225789999999
Q ss_pred cCcEEEE
Q 011567 274 YRFRVFL 280 (483)
Q Consensus 274 ~~~~li~ 280 (483)
.|+-.++
T Consensus 93 agVk~~v 99 (233)
T PF05368_consen 93 AGVKHFV 99 (233)
T ss_dssp HT-SEEE
T ss_pred cccceEE
Confidence 9876665
No 416
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=33.90 E-value=2.7e+02 Score=26.73 Aligned_cols=148 Identities=9% Similarity=0.123 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCC-cccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEc--CCc
Q 011567 126 EKLLESCTSALEKYGVGSCGPRG-FYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVAD--EGV 202 (483)
Q Consensus 126 p~i~~a~~~~l~~~g~g~~~~~~-~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~--~~~ 202 (483)
..+.+.+++.|+..|...-.-.. +.........+++.+.++...+--++++.|+.|...+.+.+...-.+|++. ++.
T Consensus 14 ~~~~~gf~~~L~~~g~~~~~~~~~~~~a~~d~~~~~~~~~~l~~~~~DlIi~~gt~aa~~~~~~~~~~iPVVf~~V~dp~ 93 (294)
T PF04392_consen 14 DDIVRGFKDGLKELGYDEKNVEIEYKNAEGDPEKLRQIARKLKAQKPDLIIAIGTPAAQALAKHLKDDIPVVFCGVSDPV 93 (294)
T ss_dssp HHHHHHHHHHHHHTT--CCCEEEEEEE-TT-HHHHHHHHHHHCCTS-SEEEEESHHHHHHHHHH-SS-S-EEEECES-TT
T ss_pred HHHHHHHHHHHHHcCCccccEEEEEecCCCCHHHHHHHHHHHhcCCCCEEEEeCcHHHHHHHHhcCCCcEEEEEeccChh
Confidence 45667788888887653300010 011112334555555555555555777778777676766665434566543 233
Q ss_pred hhHHHhHhhhcCCeEEEec-CCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEE
Q 011567 203 HWGIQNGLYLSRSTVVYFK-HNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFL 280 (483)
Q Consensus 203 h~s~~~g~~~s~~~v~~~~-~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~ 280 (483)
...+......++..+.-+. ..+++.--+++++.-+.. ++..|+.++-..+ ...-.+.+.+.++++|+-++.
T Consensus 94 ~~~l~~~~~~~~~nvTGv~~~~~~~~~l~l~~~l~P~~-----k~igvl~~~~~~~--~~~~~~~~~~~a~~~g~~l~~ 165 (294)
T PF04392_consen 94 GAGLVDSLDRPGKNVTGVSERPPIEKQLELIKKLFPDA-----KRIGVLYDPSEPN--SVAQIEQLRKAAKKLGIELVE 165 (294)
T ss_dssp TTTS-S-SSS--SSEEEEEE---HHHHHHHHHHHSTT-------EEEEEEETT-HH--HHHHHHHHHHHHHHTT-EEEE
T ss_pred hhhccccccCCCCCEEEEECCcCHHHHHHHHHHhCCCC-----CEEEEEecCCCcc--HHHHHHHHHHHHHHcCCEEEE
Confidence 3333333333333443222 223333334444443221 2333555543321 223478899999999988764
No 417
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=32.98 E-value=4.8e+02 Score=25.52 Aligned_cols=140 Identities=18% Similarity=0.137 Sum_probs=72.1
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhc--cCCcEEEEcCC--
Q 011567 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFC--KKGDLIVADEG-- 201 (483)
Q Consensus 126 p~i~~a~~~~l~~~g~g~~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~--~~gdiI~~~~~-- 201 (483)
.++++.+.+.++++-. --......+.+.-++++...+.|++-+.+.++...++... ++.-.|++.+.
T Consensus 86 ~~~k~~l~e~~~~~~~---------e~~~~~~~I~~~a~~~i~~g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP 156 (310)
T PRK08535 86 EEARESVIERAEEFIE---------SSENAVEKIGEIGAKRIRDGDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRP 156 (310)
T ss_pred HHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHcCCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCc
Confidence 5566666666555310 0011223344444455555566665444455555655443 23333444332
Q ss_pred chhH--HHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC--hHHHHHHHHHcCcE
Q 011567 202 VHWG--IQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP--LDELIRLKEKYRFR 277 (483)
Q Consensus 202 ~h~s--~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~--L~~l~~l~~k~~~~ 277 (483)
...+ +.+-+.-.|.++..+..+. +-..+.+.+ ..++=.+.+..++|.+.. --.++-+|+.|++.
T Consensus 157 ~~~G~~~a~~L~~~GI~vtlI~Dsa---v~~~m~~vd---------~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vP 224 (310)
T PRK08535 157 RNQGHITAKELAEYGIPVTLIVDSA---VRYFMKDVD---------KVVVGADAITANGAVINKIGTSQIALAAHEARVP 224 (310)
T ss_pred hhhHHHHHHHHHHCCCCEEEEehhH---HHHHHHhCC---------EEEECccEEecCCCEEeHHhHHHHHHHHHHhCCC
Confidence 2222 2334445577776665433 333444421 344446778888555555 36788889999998
Q ss_pred EEEe-Ccccc
Q 011567 278 VFLD-ESNSF 286 (483)
Q Consensus 278 li~D-Ea~s~ 286 (483)
+++= |++.+
T Consensus 225 v~V~a~~~K~ 234 (310)
T PRK08535 225 FMVAAETYKF 234 (310)
T ss_pred EEEeccccee
Confidence 8863 44443
No 418
>PF08423 Rad51: Rad51; InterPro: IPR013632 This domain is found at the C terminus of the DNA repair and recombination protein Rad51. It is critical for DNA binding []. Rad51 is a homologue of the bacterial RecA protein. Rad51 and RecA share a core ATPase domain.; PDB: 2ZUC_A 2Z43_C 2ZUD_B 2DFL_A 2ZUB_A 2BKE_A 2KZ3_A 2CVH_B 2CVF_B 1SZP_D ....
Probab=32.36 E-value=2.3e+02 Score=26.77 Aligned_cols=63 Identities=22% Similarity=0.356 Sum_probs=37.5
Q ss_pred eEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccC-------CCCCccC--------hHHHHHHHHHcCcEEEE
Q 011567 216 TVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQ-------NSGQIAP--------LDELIRLKEKYRFRVFL 280 (483)
Q Consensus 216 ~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~-------~~G~i~~--------L~~l~~l~~k~~~~li~ 280 (483)
++..+...|.+++.+++........ ..+.++||++++.. ..|.... +..|..++++|++.+++
T Consensus 106 ~I~v~~~~~~~~l~~~L~~l~~~l~--~~~ikLIVIDSIaalfr~e~~~~~~~~~R~~~L~~~~~~L~~lA~~~~iaVvv 183 (256)
T PF08423_consen 106 NIFVIRVFDLEELLELLEQLPKLLS--ESKIKLIVIDSIAALFRSEFSGRGDLAERQRMLARLARILKRLARKYNIAVVV 183 (256)
T ss_dssp TEEEEE-SSHHHHHHHHHHHHHHHH--HSCEEEEEEETSSHHHHHHSGSTTTHHHHHHHHHHHHHHHHHHHHHTT-EEEE
T ss_pred ceeeeecCCHHHHHHHHHHHHhhcc--ccceEEEEecchHHHHHHHHccchhhHHHHHHHHHHHHHHHHHHHhCCceEEe
Confidence 3455555678888777765432211 12589999998542 1223221 35689999999977554
No 419
>PRK09505 malS alpha-amylase; Reviewed
Probab=31.79 E-value=79 Score=34.69 Aligned_cols=21 Identities=19% Similarity=0.298 Sum_probs=19.7
Q ss_pred hHHHHHHHHHcCcEEEEeCcc
Q 011567 264 LDELIRLKEKYRFRVFLDESN 284 (483)
Q Consensus 264 L~~l~~l~~k~~~~li~DEa~ 284 (483)
++++++.|+++|+.+|+|-+.
T Consensus 294 fk~Lv~~aH~~Gi~VilD~V~ 314 (683)
T PRK09505 294 LRTLVDEAHQRGIRILFDVVM 314 (683)
T ss_pred HHHHHHHHHHCCCEEEEEECc
Confidence 899999999999999999874
No 420
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=31.50 E-value=5e+02 Score=25.29 Aligned_cols=112 Identities=17% Similarity=0.147 Sum_probs=63.2
Q ss_pred HHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccC--CcEEEEcCCchh----HHHhHhhhcCCeEEEecCCCHHHHHHH
Q 011567 158 DCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKK--GDLIVADEGVHW----GIQNGLYLSRSTVVYFKHNDMDSLRNT 231 (483)
Q Consensus 158 ~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~--gdiI~~~~~~h~----s~~~g~~~s~~~v~~~~~~d~~~Le~~ 231 (483)
..+.+--+.....+.++.-+.+-++..-++...++ .-.|++.+.+-. ...+.+...|.+...++ |. .+-.+
T Consensus 151 ~Ia~Qa~ehihsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~--da-aVfA~ 227 (353)
T KOG1465|consen 151 NIAVQAIEHIHSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP--DA-AVFAM 227 (353)
T ss_pred hHHHHHHHHhccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec--cH-HHHHH
Confidence 33444444555667777767777777776655544 333444332211 11122223344433332 32 23344
Q ss_pred HHHhhhhhhhccCccEEEEEecccCCCCCccC--hHHHHHHHHHcCcEEEEe
Q 011567 232 LERVTADNKRAKKLRRYIVVEAVYQNSGQIAP--LDELIRLKEKYRFRVFLD 281 (483)
Q Consensus 232 l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~--L~~l~~l~~k~~~~li~D 281 (483)
+.+.. ..+|.+-.++.|+|...| ...++..+++|-+.+++=
T Consensus 228 MsrVn---------KVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~Vl 270 (353)
T KOG1465|consen 228 MSRVN---------KVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVL 270 (353)
T ss_pred hhhcc---------eEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEe
Confidence 43332 456667778888887777 688888899999988874
No 421
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=31.49 E-value=5.3e+02 Score=25.56 Aligned_cols=134 Identities=11% Similarity=0.145 Sum_probs=68.0
Q ss_pred HHHHhhhhhhccCCcEEEEc-CCchh-HH----HhHhhhcCCeEEEecC-CCHHHHH-HHHHHhhhhhhhccCccEEEEE
Q 011567 180 STMFSAIPCFCKKGDLIVAD-EGVHW-GI----QNGLYLSRSTVVYFKH-NDMDSLR-NTLERVTADNKRAKKLRRYIVV 251 (483)
Q Consensus 180 ~a~~~ai~~~~~~gdiI~~~-~~~h~-s~----~~g~~~s~~~v~~~~~-~d~~~Le-~~l~~~~~~~~~~~~~~~~iv~ 251 (483)
.++.-...-+.+.|.-|+.. ..++- +- .......|.+++.-+. .|+..+. +.++....+ ..-++++
T Consensus 154 TTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar------~~Dvvli 227 (340)
T COG0552 154 TTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKAR------GIDVVLI 227 (340)
T ss_pred hHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHc------CCCEEEE
Confidence 44444455566666655443 33332 21 1223345666665433 3666543 344333222 3446666
Q ss_pred ec---ccCCCCCccChHHHHHHHHHcC------cEEEEeCccccccccCCCCccccccCCCCCceeEEEcccccccc-CC
Q 011567 252 EA---VYQNSGQIAPLDELIRLKEKYR------FRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA-TE 321 (483)
Q Consensus 252 e~---v~~~~G~i~~L~~l~~l~~k~~------~~li~DEa~s~g~lg~~G~g~~~~~~v~~~~~Di~~~s~~K~lg-~~ 321 (483)
+. .++...-+..|++|.+++++.. +++++|... |..+---+..|+-. -++|=+ -++|-=| .-
T Consensus 228 DTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAtt-----Gqnal~QAk~F~ea-v~l~Gi--IlTKlDgtAK 299 (340)
T COG0552 228 DTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATT-----GQNALSQAKIFNEA-VGLDGI--ILTKLDGTAK 299 (340)
T ss_pred eCcccccCchhHHHHHHHHHHHhccccCCCCceEEEEEEccc-----ChhHHHHHHHHHHh-cCCceE--EEEecccCCC
Confidence 65 3444445556899999999875 778889763 33221112333211 122333 2566655 44
Q ss_pred Cceeec
Q 011567 322 GGFCTG 327 (483)
Q Consensus 322 GG~i~~ 327 (483)
||.++.
T Consensus 300 GG~il~ 305 (340)
T COG0552 300 GGIILS 305 (340)
T ss_pred cceeee
Confidence 777654
No 422
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=30.91 E-value=28 Score=33.39 Aligned_cols=24 Identities=25% Similarity=0.353 Sum_probs=20.9
Q ss_pred cChHHHHHHHHHcCcEEEEeCccc
Q 011567 262 APLDELIRLKEKYRFRVFLDESNS 285 (483)
Q Consensus 262 ~~L~~l~~l~~k~~~~li~DEa~s 285 (483)
.++++|++.|+++|+.+|+|=+..
T Consensus 52 ~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 52 EDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETS
T ss_pred hhhhhhhhccccccceEEEeeecc
Confidence 348999999999999999998753
No 423
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=30.76 E-value=51 Score=35.49 Aligned_cols=38 Identities=18% Similarity=0.204 Sum_probs=29.1
Q ss_pred CCCccChHHHHHHHHHcCcEEEEeCccccccccCCCCccc
Q 011567 258 SGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT 297 (483)
Q Consensus 258 ~G~i~~L~~l~~l~~k~~~~li~DEa~s~g~lg~~G~g~~ 297 (483)
-|...+++++++-|++.|+-+|+|=+++- +++.|-++.
T Consensus 210 yGtPedfk~fVD~aH~~GIgViLD~V~~H--F~~d~~~L~ 247 (628)
T COG0296 210 YGTPEDFKALVDAAHQAGIGVILDWVPNH--FPPDGNYLA 247 (628)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEecCCc--CCCCcchhh
Confidence 35555599999999999999999999864 455555543
No 424
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=30.47 E-value=5.2e+02 Score=25.15 Aligned_cols=117 Identities=16% Similarity=0.164 Sum_probs=62.1
Q ss_pred HHHHHHHhhhCCCCEEEecccHHHHHhhhhhhcc--CC-cEEEEcCC-chhH--HHhHhhhcCCeEEEecCCCHHHHHHH
Q 011567 158 DCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCK--KG-DLIVADEG-VHWG--IQNGLYLSRSTVVYFKHNDMDSLRNT 231 (483)
Q Consensus 158 ~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~--~g-diI~~~~~-~h~s--~~~g~~~s~~~v~~~~~~d~~~Le~~ 231 (483)
.+.+.-++++...+.|++-+.+.++...++...+ +. .+++++.. .... +.+-+.-.|.++..+..+ .+-..
T Consensus 104 ~I~~~a~~~i~~g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G~~~a~~L~~~gI~vtlI~Ds---a~~~~ 180 (301)
T TIGR00511 104 RIGEIGAKRIRDGDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQGHITAKELRDYGIPVTLIVDS---AVRYF 180 (301)
T ss_pred HHHHHHHHHcCCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchHHHHHHHHHHCCCCEEEEehh---HHHHH
Confidence 3334444555555666654444555555544332 22 34444322 2222 233444556666666433 33334
Q ss_pred HHHhhhhhhhccCccEEEEEecccCCCCCccC--hHHHHHHHHHcCcEEEEe-Ccccc
Q 011567 232 LERVTADNKRAKKLRRYIVVEAVYQNSGQIAP--LDELIRLKEKYRFRVFLD-ESNSF 286 (483)
Q Consensus 232 l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~--L~~l~~l~~k~~~~li~D-Ea~s~ 286 (483)
+.+.. ..++=.+.+..++|.+.. --.++-+|+.|++.+++= |++.+
T Consensus 181 m~~vd---------~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~a~~~K~ 229 (301)
T TIGR00511 181 MKEVD---------HVVVGADAITANGALINKIGTSQLALAAREARVPFMVAAETYKF 229 (301)
T ss_pred HHhCC---------EEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEEccccee
Confidence 44421 344447888888666555 367888899999988863 44443
No 425
>PRK10785 maltodextrin glucosidase; Provisional
Probab=30.21 E-value=1.3e+02 Score=32.62 Aligned_cols=56 Identities=18% Similarity=0.230 Sum_probs=36.9
Q ss_pred CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCC-----------------CCccChHHHHHHHHHcCcEEEEeCcc
Q 011567 223 NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNS-----------------GQIAPLDELIRLKEKYRFRVFLDESN 284 (483)
Q Consensus 223 ~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~-----------------G~i~~L~~l~~l~~k~~~~li~DEa~ 284 (483)
.|+..+.+.|..+..- .+-+|.+.|++... |...++++|++.|++.|+.||+|-+.
T Consensus 176 GDl~GI~~kLdYL~~L------Gv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~ 248 (598)
T PRK10785 176 GDLDGISEKLPYLKKL------GVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVF 248 (598)
T ss_pred cCHHHHHHHHHHHHHc------CCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 3666666555444321 34566666766432 22233899999999999999999884
No 426
>PF12818 Tegument_dsDNA: dsDNA viral tegument protein; InterPro: IPR024346 This entry represents the N-terminal domain of tegument proteins from double-stranded DNA herpesvirus.
Probab=29.70 E-value=5.2e+02 Score=24.94 Aligned_cols=116 Identities=15% Similarity=0.155 Sum_probs=59.7
Q ss_pred HHHHHHHHHHhhhCC-CCEEEe----cccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHH
Q 011567 155 VHLDCEARIAKFLGT-PDSILY----SYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLR 229 (483)
Q Consensus 155 ~~~~l~~~La~~~g~-e~~i~~----~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le 229 (483)
....+-+.|+.|.+. +...+. +-|...+..-+.+++.++...+.-..=-..+...+. .++..+.+..|
T Consensus 149 ~~~~i~~aL~~f~~~~~~~cis~~~r~~~~~sv~~~L~aL~~~~G~~l~lS~LP~~i~~~L~-------~~~~~~~~~~~ 221 (282)
T PF12818_consen 149 EQNKILQALQQFYSTLESPCISGSIRPPGPASVKEHLLALCHPGGARLDLSALPQEIVSQLK-------RSPPENREHNE 221 (282)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEeecCCCCchhHHHHHHHhcCCCceEEEhhcCCHHHHHHhc-------cCCchhHHHHH
Confidence 445566666666653 211222 334455555566666655433322211122333332 34445666677
Q ss_pred HHHHHhhhhhhhccCccEEEEEeccc--CCCCC-ccChHHHHHHHHHcCcEEEE
Q 011567 230 NTLERVTADNKRAKKLRRYIVVEAVY--QNSGQ-IAPLDELIRLKEKYRFRVFL 280 (483)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~iv~e~v~--~~~G~-i~~L~~l~~l~~k~~~~li~ 280 (483)
++++..=-+ .-....++++.... .+++. ..|++.|..+|+.+|+.+.+
T Consensus 222 ~~i~~~FLN---v~~~~vfl~V~n~~~~~~~~~~~~~l~~L~~~c~~~gc~~~i 272 (282)
T PF12818_consen 222 EIIKQHFLN---VYCSVVFLVVSNTPIDTNTDQGFGPLDALKRACRLCGCPVHI 272 (282)
T ss_pred HHHHhhhhc---cccceEEEEEecCCCCCcccccccHHHHHHHHHHHCCCCEEE
Confidence 777653211 01124555554332 33333 46899999999999988754
No 427
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=29.10 E-value=1.2e+02 Score=29.69 Aligned_cols=21 Identities=38% Similarity=0.507 Sum_probs=19.3
Q ss_pred hHHHHHHHHHcCcEEEEeCcc
Q 011567 264 LDELIRLKEKYRFRVFLDESN 284 (483)
Q Consensus 264 L~~l~~l~~k~~~~li~DEa~ 284 (483)
..+|+++|+++|..+++|-+.
T Consensus 148 y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 148 YAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred HHHHHHHHHhcCCeEEEECCh
Confidence 799999999999999999763
No 428
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=28.97 E-value=3.8e+02 Score=23.17 Aligned_cols=118 Identities=14% Similarity=0.183 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCc-EEEEcCCchhHHHhHhhhcCCeEEEe----cCC-----
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGD-LIVADEGVHWGIQNGLYLSRSTVVYF----KHN----- 223 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gd-iI~~~~~~h~s~~~g~~~s~~~v~~~----~~~----- 223 (483)
+.-.++++..+++....+.+++.+|+.+.. .++.+.++.+ .|++........... ....+++.. ..+
T Consensus 4 ~~K~~IA~~A~~~I~~~~~Ifld~GtT~~~-la~~L~~~~~ltVvTnsl~ia~~l~~--~~~~~vi~~GG~~~~~~~~~~ 80 (161)
T PF00455_consen 4 EEKRAIARKAASLIEDGDTIFLDSGTTTLE-LAKYLPDKKNLTVVTNSLPIANELSE--NPNIEVILLGGEVNPKSLSFV 80 (161)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECchHHHH-HHHHhhcCCceEEEECCHHHHHHHHh--cCceEEEEeCCEEEcCCCcEE
Confidence 445677888888889899999999987654 4444555534 455544322222111 112233211 111
Q ss_pred CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChH-------HHHHHHHHcCcEEEEeCcc
Q 011567 224 DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLD-------ELIRLKEKYRFRVFLDESN 284 (483)
Q Consensus 224 d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~-------~l~~l~~k~~~~li~DEa~ 284 (483)
....+ +.+++...+ .+|+-+.++....|...+-. .+++.++ ...+++|.+-
T Consensus 81 G~~a~-~~l~~~~~d-------~afi~~~gi~~~~G~~~~~~~~a~vk~~~~~~s~--~~ill~D~sK 138 (161)
T PF00455_consen 81 GPIAL-EALRQFRFD-------KAFIGADGISEEGGLTTSDEEEAEVKRAMIENSK--QVILLADSSK 138 (161)
T ss_pred CchHH-HHHHhhccc-------eEEecccEecCCCccccchHHHHHHHHHHHHhcC--eEEEEeChhh
Confidence 22222 344554443 78888888887667776632 2333332 5778888653
No 429
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=28.20 E-value=4e+02 Score=25.48 Aligned_cols=24 Identities=21% Similarity=0.155 Sum_probs=19.3
Q ss_pred CCCCccChHHHHHHHHHcCcEEEE
Q 011567 257 NSGQIAPLDELIRLKEKYRFRVFL 280 (483)
Q Consensus 257 ~~G~i~~L~~l~~l~~k~~~~li~ 280 (483)
..|.-..+-+.++.++++|+.+|.
T Consensus 186 ~sG~t~e~i~~a~~ak~~ga~vIa 209 (281)
T COG1737 186 FSGYTREIVEAAELAKERGAKVIA 209 (281)
T ss_pred CCCCcHHHHHHHHHHHHCCCcEEE
Confidence 446666799999999999988764
No 430
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=27.85 E-value=1.7e+02 Score=20.49 Aligned_cols=31 Identities=6% Similarity=0.153 Sum_probs=26.4
Q ss_pred eEEEccCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011567 451 IRLFVSAAHSEADLVKACESLKRISAVVLRD 481 (483)
Q Consensus 451 lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~ 481 (483)
+++.+....|+|+..++.+.+-+++.+.+..
T Consensus 4 i~i~~~~Grs~EqK~~L~~~it~a~~~~~~~ 34 (60)
T PRK02289 4 VRIDLFEGRSQEQKNALAREVTEVVSRIAKA 34 (60)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 6777766789999999999999999887754
No 431
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=27.83 E-value=94 Score=28.13 Aligned_cols=35 Identities=20% Similarity=0.254 Sum_probs=28.1
Q ss_pred ccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEE
Q 011567 245 LRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFL 280 (483)
Q Consensus 245 ~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~ 280 (483)
+...+++|=+.. .|.+..++++.+++++|++.++.
T Consensus 152 ~p~avi~eil~~-dG~~~~~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 152 SPVAVICEILDD-DGDMARRDELEEFAKKHGLPIVS 186 (194)
T ss_dssp -SBEEEEEBBET-TSSBHCHHHHHHHHHHTT-EEEE
T ss_pred CCcEEEEEEeCC-CCCcCCHHHHHHHHHHcCCcEEE
Confidence 367788886644 79999999999999999998873
No 432
>PRK09458 pspB phage shock protein B; Provisional
Probab=27.64 E-value=1.7e+02 Score=22.00 Aligned_cols=31 Identities=23% Similarity=0.305 Sum_probs=18.8
Q ss_pred HHHHHHHHHHhcCCCCCCCC-CCCHHHHHHHH
Q 011567 43 LLLVVILFLLSQKSYKPPKR-PLTKKEIDELC 73 (483)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~-~l~~~e~~~l~ 73 (483)
+++++-+|+++..+.|.+.. .||++|...|-
T Consensus 14 ~ifVaPiWL~LHY~sk~~~~~~Ls~~d~~~L~ 45 (75)
T PRK09458 14 VLFVAPIWLWLHYRSKRQGSQGLSQEEQQRLA 45 (75)
T ss_pred HHHHHHHHHHHhhcccccCCCCCCHHHHHHHH
Confidence 33445667777655544433 79998855444
No 433
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=27.58 E-value=1.2e+02 Score=30.67 Aligned_cols=33 Identities=21% Similarity=0.435 Sum_probs=26.7
Q ss_pred EEEEecccCCCCCccChHHHHHHHHHcCcEEEEeC
Q 011567 248 YIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDE 282 (483)
Q Consensus 248 ~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DE 282 (483)
++|.. -|.. |.+.+.++++++|++.|+.+++|-
T Consensus 146 ~vVLS-DY~K-G~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 146 ALVLS-DYAK-GVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred EEEEe-cccc-ccchhHHHHHHHHHHcCCcEEECC
Confidence 44443 4554 888899999999999999999994
No 434
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=27.49 E-value=44 Score=34.99 Aligned_cols=26 Identities=19% Similarity=0.170 Sum_probs=22.4
Q ss_pred CCccChHHHHHHHHHcCcEEEEeCcc
Q 011567 259 GQIAPLDELIRLKEKYRFRVFLDESN 284 (483)
Q Consensus 259 G~i~~L~~l~~l~~k~~~~li~DEa~ 284 (483)
|...+|++|++-|+++|+.+|+|-+.
T Consensus 78 Gt~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 78 GTKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 45555999999999999999999884
No 435
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=27.30 E-value=88 Score=29.89 Aligned_cols=36 Identities=17% Similarity=0.283 Sum_probs=26.7
Q ss_pred ccCCCCCccChHHHHHHHHHc--CcEEEE-eCccccccc
Q 011567 254 VYQNSGQIAPLDELIRLKEKY--RFRVFL-DESNSFGVL 289 (483)
Q Consensus 254 v~~~~G~i~~L~~l~~l~~k~--~~~li~-DEa~s~g~l 289 (483)
+++++|.+..-.+|+++.++| ++.+++ +.+.|.|.+
T Consensus 97 i~TpGG~v~AA~~I~~~l~~~~~~v~v~VP~~A~SAGTl 135 (285)
T PF01972_consen 97 IHTPGGLVDAAEQIARALREHPAKVTVIVPHYAMSAGTL 135 (285)
T ss_pred EECCCCcHHHHHHHHHHHHhCCCCEEEEECcccccHHHH
Confidence 457789988889999999988 444454 667777764
No 436
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=27.18 E-value=1.5e+02 Score=31.57 Aligned_cols=57 Identities=16% Similarity=0.213 Sum_probs=36.1
Q ss_pred CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCC------------------CCccChHHHHHHHHHcCcEEEEeCcc
Q 011567 223 NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNS------------------GQIAPLDELIRLKEKYRFRVFLDESN 284 (483)
Q Consensus 223 ~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~------------------G~i~~L~~l~~l~~k~~~~li~DEa~ 284 (483)
.|+..+.+.|..+..- ..-.|.+.|++... |...++++|++-|+++|+.+|+|-+.
T Consensus 25 Gdl~gi~~~Ldyl~~L------Gv~~i~L~Pi~~~~~~~~gY~~~dy~~vd~~~Gt~~df~~Lv~~ah~~Gi~vilD~V~ 98 (539)
T TIGR02456 25 GDFPGLTSKLDYLKWL------GVDALWLLPFFQSPLRDDGYDVSDYRAILPEFGTIDDFKDFVDEAHARGMRVIIDLVL 98 (539)
T ss_pred cCHHHHHHhHHHHHHC------CCCEEEECCCcCCCCCCCCCCcccccccChhhCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 4556665555544321 24566666665432 22223788999999999999999874
Q ss_pred c
Q 011567 285 S 285 (483)
Q Consensus 285 s 285 (483)
.
T Consensus 99 N 99 (539)
T TIGR02456 99 N 99 (539)
T ss_pred C
Confidence 3
No 437
>TIGR01389 recQ ATP-dependent DNA helicase RecQ. The ATP-dependent DNA helicase RecQ of E. coli is about 600 residues long. This model represents bacterial proteins with a high degree of similarity in domain architecture and in primary sequence to E. coli RecQ. The model excludes eukaryotic and archaeal proteins with RecQ-like regions, as well as more distantly related bacterial helicases related to RecQ.
Probab=27.14 E-value=7.7e+02 Score=26.45 Aligned_cols=114 Identities=14% Similarity=0.168 Sum_probs=49.5
Q ss_pred hhhCCCCEEEe-cccH-HHHHhhhhhhccCCcEEEEcCCchhH--HHhHhhhcCCeEEEecCC-CHHHHHHHHHHhhhhh
Q 011567 165 KFLGTPDSILY-SYGL-STMFSAIPCFCKKGDLIVADEGVHWG--IQNGLYLSRSTVVYFKHN-DMDSLRNTLERVTADN 239 (483)
Q Consensus 165 ~~~g~e~~i~~-~sG~-~a~~~ai~~~~~~gdiI~~~~~~h~s--~~~g~~~s~~~v~~~~~~-d~~~Le~~l~~~~~~~ 239 (483)
..+...+.++. .+|+ =+....++++...|..|++.....-. ....+...|..+..+..+ +.++-.+.+......
T Consensus 24 ~il~g~dvlv~~PTG~GKTl~y~lpal~~~g~~lVisPl~sL~~dq~~~l~~~gi~~~~~~s~~~~~~~~~~~~~l~~~- 102 (591)
T TIGR01389 24 HVLDGRDVLVVMPTGGGKSLCYQVPALLLKGLTVVISPLISLMKDQVDQLRAAGVAAAYLNSTLSAKEQQDIEKALVNG- 102 (591)
T ss_pred HHHcCCCEEEEcCCCccHhHHHHHHHHHcCCcEEEEcCCHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHHHhCC-
Confidence 33433455444 5554 23333466666666555553221111 112333345555444332 344444444333221
Q ss_pred hhccCccEEEEEecccCCCCCccChHHHH-HHHHHcCcEEEEeCcccccccc
Q 011567 240 KRAKKLRRYIVVEAVYQNSGQIAPLDELI-RLKEKYRFRVFLDESNSFGVLG 290 (483)
Q Consensus 240 ~~~~~~~~~iv~e~v~~~~G~i~~L~~l~-~l~~k~~~~li~DEa~s~g~lg 290 (483)
...++++.|-. +.. .... .+....=-++|+||+|...-.|
T Consensus 103 -----~~~il~~tpe~-----l~~-~~~~~~l~~~~l~~iViDEaH~i~~~g 143 (591)
T TIGR01389 103 -----ELKLLYVAPER-----LEQ-DYFLNMLQRIPIALVAVDEAHCVSQWG 143 (591)
T ss_pred -----CCCEEEEChhH-----hcC-hHHHHHHhcCCCCEEEEeCCccccccc
Confidence 24455554321 111 1111 2222334679999999865433
No 438
>TIGR00762 DegV EDD domain protein, DegV family. This family of proteins is related to DegV of Bacillus subtilis and includes paralogous sets in several species (B. subtilis, Deinococcus radiodurans, Mycoplasma pneumoniae) that are closer in percent identity to each than to most homologs from other species. This suggests both recent paralogy and diversity of function. DegV itself is encoded immediately downstream of DegU, a transcriptional regulator of degradation, but is itself uncharacterized. Crystallography suggested a lipid-binding site, while comparison of the crystal structure to dihydroxyacetone kinase and to a mannose transporter EIIA domain suggests a conserved domain, EDD, with phosphotransferase activity.
Probab=27.05 E-value=4.5e+02 Score=25.00 Aligned_cols=11 Identities=36% Similarity=0.368 Sum_probs=8.3
Q ss_pred EEECCeeEEEe
Q 011567 104 TIISGKEVVNF 114 (483)
Q Consensus 104 ~~~~G~~~id~ 114 (483)
+.+||+.|+|.
T Consensus 28 I~~~~~~y~D~ 38 (275)
T TIGR00762 28 VIIDGKTYRDG 38 (275)
T ss_pred EEECCEEeecC
Confidence 34789999983
No 439
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
Probab=26.80 E-value=41 Score=36.91 Aligned_cols=41 Identities=24% Similarity=0.349 Sum_probs=34.1
Q ss_pred ccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeCccc
Q 011567 245 LRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNS 285 (483)
Q Consensus 245 ~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DEa~s 285 (483)
+.-+..+++-|+..|.+..++++++-|++.|+.+|+|-++.
T Consensus 228 ~~~y~a~d~~y~~~g~~~efk~LV~~~H~~GI~VIlDvV~N 268 (688)
T TIGR02100 228 TLGFFAPEPRYLASGQVAEFKTMVRALHDAGIEVILDVVYN 268 (688)
T ss_pred cccccccChhhcCCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 35567777777666777889999999999999999999864
No 440
>PF10678 DUF2492: Protein of unknown function (DUF2492); InterPro: IPR019620 This entry describes a family of small cytosolic proteins, about 80 amino acids in length, in which the eight invariant residues include three His residues and two Cys residues. Two pairs of these invariant residues occur in motifs HxH (where x is A or G) and CxH, both of which suggest metal-binding activity. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulphatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulphur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulphatase/maturase systems.
Probab=26.32 E-value=1.1e+02 Score=23.19 Aligned_cols=47 Identities=15% Similarity=0.201 Sum_probs=32.7
Q ss_pred HHHHHHHHHhhhCCCCEEEecccHHH-HHhhhhhhccCCcEEEEcCCc
Q 011567 156 HLDCEARIAKFLGTPDSILYSYGLST-MFSAIPCFCKKGDLIVADEGV 202 (483)
Q Consensus 156 ~~~l~~~La~~~g~e~~i~~~sG~~a-~~~ai~~~~~~gdiI~~~~~~ 202 (483)
..+|.+.+.+.||.+.-+-.+|+..- ....+.-+.+||+++..++.+
T Consensus 22 ~~~L~~ai~~~FG~~arFhTCSae~m~a~eLv~FL~~rgKfi~~~~g~ 69 (78)
T PF10678_consen 22 KEELKAAIIEKFGEDARFHTCSAEGMTADELVDFLEERGKFIPSDDGF 69 (78)
T ss_pred HHHHHHHHHHHhCCCceEEecCCCCCCHHHHHHHHHHcCCEeecCCCE
Confidence 57899999999998877755555322 233355667889988876654
No 441
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=25.87 E-value=1.1e+02 Score=27.73 Aligned_cols=33 Identities=18% Similarity=0.336 Sum_probs=28.0
Q ss_pred cEEEEEecccCCCCCccChHHHHHHHHHcCcEEE
Q 011567 246 RRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVF 279 (483)
Q Consensus 246 ~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li 279 (483)
...+++|=+.. .|.+..++++.+++++|++.++
T Consensus 158 p~~vicEil~~-dG~m~~~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 158 PAGVICEMMND-DGTMARKPELMEYAKKHNLKLI 190 (199)
T ss_pred ceEEEEEEeCC-CCCccCHHHHHHHHHHcCCcEE
Confidence 56777876544 6999999999999999999886
No 442
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=25.51 E-value=3e+02 Score=21.41 Aligned_cols=65 Identities=11% Similarity=0.130 Sum_probs=36.6
Q ss_pred hHHHhHhhhcCCeEEEe--cCCC-H--HHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHcCcEE
Q 011567 204 WGIQNGLYLSRSTVVYF--KHND-M--DSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRV 278 (483)
Q Consensus 204 ~s~~~g~~~s~~~v~~~--~~~d-~--~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~l 278 (483)
..+...+.-.|.+...+ +..+ . ..++..+.+. ...+++++-+... -...+.+.|+++++++
T Consensus 13 ~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~a---------D~VIv~t~~vsH~-----~~~~vk~~akk~~ip~ 78 (97)
T PF10087_consen 13 RRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKA---------DLVIVFTDYVSHN-----AMWKVKKAAKKYGIPI 78 (97)
T ss_pred HHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCC---------CEEEEEeCCcChH-----HHHHHHHHHHHcCCcE
Confidence 44555666677777776 2111 1 1244444331 1334444433332 2789999999999998
Q ss_pred EEeC
Q 011567 279 FLDE 282 (483)
Q Consensus 279 i~DE 282 (483)
+.=.
T Consensus 79 ~~~~ 82 (97)
T PF10087_consen 79 IYSR 82 (97)
T ss_pred EEEC
Confidence 7643
No 443
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=25.35 E-value=1.8e+02 Score=31.06 Aligned_cols=22 Identities=23% Similarity=0.383 Sum_probs=19.8
Q ss_pred ChHHHHHHHHHcCcEEEEeCcc
Q 011567 263 PLDELIRLKEKYRFRVFLDESN 284 (483)
Q Consensus 263 ~L~~l~~l~~k~~~~li~DEa~ 284 (483)
+++++++-|+++|+.+|+|=+.
T Consensus 76 ~~~~lv~~ah~~gi~vilD~v~ 97 (543)
T TIGR02403 76 DFEELVSEAKKRNIKIMLDMVF 97 (543)
T ss_pred HHHHHHHHHHHCCCEEEEEECc
Confidence 3899999999999999999774
No 444
>COG1911 RPL30 Ribosomal protein L30E [Translation, ribosomal structure and biogenesis]
Probab=25.05 E-value=85 Score=24.72 Aligned_cols=87 Identities=16% Similarity=0.145 Sum_probs=53.3
Q ss_pred HHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCc
Q 011567 182 MFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQI 261 (483)
Q Consensus 182 ~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i 261 (483)
+...++...+.|+.|+- +-.+.+.+....++.+.+..|.+.++++.++....- ....+++-+ |.-
T Consensus 7 v~~~L~~avkTGkvilG----~k~tiK~lk~gkaKliiiAsN~P~~~k~~ieyYAkL-----s~ipV~~y~------Gt~ 71 (100)
T COG1911 7 VEKELKLAVKTGKVILG----SKRTIKSLKLGKAKLIIIASNCPKELKEDIEYYAKL-----SDIPVYVYE------GTS 71 (100)
T ss_pred HHHHHHHHHhcCCEEEe----hHHHHHHHHcCCCcEEEEecCCCHHHHHHHHHHHHH-----cCCcEEEec------CCc
Confidence 34445566677887774 336778888888899999999999998888765321 013344333 333
Q ss_pred cChHHHHHHHHHcCcEEEEeCc
Q 011567 262 APLDELIRLKEKYRFRVFLDES 283 (483)
Q Consensus 262 ~~L~~l~~l~~k~~~~li~DEa 283 (483)
.+|-.++.--..-+++.|.|+=
T Consensus 72 ~eLG~~cgkpf~v~~laIiD~G 93 (100)
T COG1911 72 VELGTVCGKPFRVAALAIIDEG 93 (100)
T ss_pred eeHHhhhCCCceEEEEEEecCc
Confidence 3343333222334777888874
No 445
>COG4273 Uncharacterized conserved protein [Function unknown]
Probab=25.01 E-value=1.8e+02 Score=24.20 Aligned_cols=54 Identities=20% Similarity=0.227 Sum_probs=39.4
Q ss_pred HHHHHHHHhCCEEEEeecccccccCCCCCceEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 421 DIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 421 ~i~~~~l~~~Gv~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
..+..+|++.||-+...-.-+ .-||+=..+...++||+++.+..+++++..-++
T Consensus 79 ~Catk~l~~AGv~~D~~l~it------dlGikK~~~~D~~~edv~kv~~~i~e~l~~~~~ 132 (135)
T COG4273 79 RCATKCLAEAGVQADVHLTIT------DLGIKKTYPSDCKDEDVEKVARTIKEALTIKLN 132 (135)
T ss_pred HHHHHHHHHhccceeEEEEeh------hcccccCCCCCCCHHHHHHHHHHHHHHhhhccc
Confidence 457778888888776432211 134666788899999999999999998876544
No 446
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=24.56 E-value=92 Score=25.94 Aligned_cols=31 Identities=32% Similarity=0.434 Sum_probs=18.5
Q ss_pred ccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEEeC
Q 011567 245 LRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDE 282 (483)
Q Consensus 245 ~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~DE 282 (483)
..++|++.+. .|-++++++|++|++.|+.=.
T Consensus 82 ~P~iIvt~~~-------~~p~~l~e~a~~~~ipll~t~ 112 (127)
T PF02603_consen 82 PPCIIVTRGL-------EPPPELIELAEKYNIPLLRTP 112 (127)
T ss_dssp -S-EEEETTT----------HHHHHHHHHCT--EEEES
T ss_pred CCEEEEECcC-------CCCHHHHHHHHHhCCcEEEcC
Confidence 3567776543 467999999999999887543
No 447
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=24.08 E-value=62 Score=29.72 Aligned_cols=20 Identities=20% Similarity=0.436 Sum_probs=17.6
Q ss_pred hHHHHHHHHHcCcEEEEeCc
Q 011567 264 LDELIRLKEKYRFRVFLDES 283 (483)
Q Consensus 264 L~~l~~l~~k~~~~li~DEa 283 (483)
.++++++|++|++.+|+++=
T Consensus 54 a~~~~~lc~~~~v~liINd~ 73 (211)
T COG0352 54 AEKLRALCQKYGVPLIINDR 73 (211)
T ss_pred HHHHHHHHHHhCCeEEecCc
Confidence 47899999999999999874
No 448
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=23.90 E-value=3e+02 Score=25.81 Aligned_cols=54 Identities=13% Similarity=0.197 Sum_probs=37.1
Q ss_pred CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCC--ccC--------hHHHHHHHHHcCcEEEEe
Q 011567 224 DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQ--IAP--------LDELIRLKEKYRFRVFLD 281 (483)
Q Consensus 224 d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~--i~~--------L~~l~~l~~k~~~~li~D 281 (483)
+++++++.++....+ . ....+|+++.++-.... ..+ .++|.++|+++|+.+|+=
T Consensus 113 ~~~~i~~~i~~~~~~---~-~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i~vi~~ 176 (259)
T PF03796_consen 113 TIDDIESKIRRLKRE---G-KKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNIPVIAL 176 (259)
T ss_dssp BHHHHHHHHHHHHHH---S-TTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred CHHHHHHHHHHHHhh---c-cCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCCeEEEc
Confidence 678888877665432 1 24679999987654321 111 467999999999999873
No 449
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=23.35 E-value=5.8e+02 Score=24.63 Aligned_cols=79 Identities=22% Similarity=0.298 Sum_probs=38.7
Q ss_pred CCCCCcccChHHHHHHHHHHHhhhCCCCEEEecccH-HHHHhhhhhhccCCcEEEEcCCchhHHHhHhhhcCCeEEEecC
Q 011567 144 CGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGL-STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH 222 (483)
Q Consensus 144 ~~~~~~~g~~~~~~~l~~~La~~~g~e~~i~~~sG~-~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~~s~~~v~~~~~ 222 (483)
+.||+|+.-.+-..+..++..+.+|.+ +|.-|. --|......+.++| .+++++..... .+..++.-.|
T Consensus 7 A~prGFCaGV~RAI~ive~al~~~g~p---Iyv~~eIVHN~~Vv~~L~~~g-~~fve~l~e~p-------~~~~VIfsAH 75 (294)
T COG0761 7 AKPRGFCAGVDRAIQIVERALEEYGAP---IYVRHEIVHNRYVVDRLREKG-AIFVEELDEVP-------DGATVIFSAH 75 (294)
T ss_pred ecCCccchhHHHHHHHHHHHHHHcCCC---eEEEeccccCHHHHHHHHHcC-CEeccccccCC-------CCCEEEEECC
Confidence 456666665565566666666666655 333332 22344455566666 55554321111 3444444456
Q ss_pred CCHHHHHHHHH
Q 011567 223 NDMDSLRNTLE 233 (483)
Q Consensus 223 ~d~~~Le~~l~ 233 (483)
.=..+..+.++
T Consensus 76 GVs~~v~~~a~ 86 (294)
T COG0761 76 GVSPAVREEAK 86 (294)
T ss_pred CCCHHHHHHHH
Confidence 54444444443
No 450
>KOG0742 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=23.24 E-value=58 Score=33.00 Aligned_cols=31 Identities=29% Similarity=0.621 Sum_probs=25.1
Q ss_pred CCCCccC--------hHHHHHHHHHc--CcEEEEeCccccc
Q 011567 257 NSGQIAP--------LDELIRLKEKY--RFRVFLDESNSFG 287 (483)
Q Consensus 257 ~~G~i~~--------L~~l~~l~~k~--~~~li~DEa~s~g 287 (483)
.+|++.| +.+|-++++|. |.+|++||+-.|-
T Consensus 416 TGGDVAPlG~qaVTkiH~lFDWakkS~rGLllFIDEADAFL 456 (630)
T KOG0742|consen 416 TGGDVAPLGAQAVTKIHKLFDWAKKSRRGLLLFIDEADAFL 456 (630)
T ss_pred cCCCccccchHHHHHHHHHHHHHhhcccceEEEehhhHHHH
Confidence 4689999 47788888875 8999999998873
No 451
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=22.91 E-value=3.4e+02 Score=22.77 Aligned_cols=17 Identities=24% Similarity=0.169 Sum_probs=15.8
Q ss_pred hHHHHHHHHHcCcEEEE
Q 011567 264 LDELIRLKEKYRFRVFL 280 (483)
Q Consensus 264 L~~l~~l~~k~~~~li~ 280 (483)
|.++++.|++.|+.+++
T Consensus 46 lge~v~a~h~~Girv~a 62 (132)
T PF14871_consen 46 LGEQVEACHERGIRVPA 62 (132)
T ss_pred HHHHHHHHHHCCCEEEE
Confidence 79999999999999875
No 452
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=22.52 E-value=1.4e+02 Score=27.48 Aligned_cols=34 Identities=18% Similarity=0.214 Sum_probs=28.1
Q ss_pred cEEEEEecccCCCCCccChHHHHHHHHHcCcEEEE
Q 011567 246 RRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFL 280 (483)
Q Consensus 246 ~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~ 280 (483)
...+++|=+. ..|.+..++++.+++++|++.++.
T Consensus 169 p~~vicEil~-~dG~ma~~~~l~~fA~~h~l~~is 202 (218)
T PRK00910 169 PAGVLCELTN-PDGTMAKTPEIIAFGKLHNMPVLT 202 (218)
T ss_pred ceEEEEEEec-CCCCcCCHHHHHHHHHHcCCcEEE
Confidence 5677787654 459999999999999999998853
No 453
>PRK13509 transcriptional repressor UlaR; Provisional
Probab=22.51 E-value=6.5e+02 Score=23.61 Aligned_cols=116 Identities=11% Similarity=0.184 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhh-hcCCeEEEe----cCCC---H
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY-LSRSTVVYF----KHND---M 225 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~-~s~~~v~~~----~~~d---~ 225 (483)
+.-..+++..+++....+.+++.+|+.+.. .++.+..++-.|++ ...+.. ..+. ..+.+++.. .+.. .
T Consensus 78 ~~K~~IA~~Aa~~I~~g~~Ifld~GsT~~~-la~~L~~~~ltVvT-nsl~ia--~~l~~~~~~~v~l~GG~~~~~~~~~~ 153 (251)
T PRK13509 78 DEKVRIAKAASQLCNPGESVVINCGSTAFL-LGRELCGKPVQIIT-NYLPLA--NYLIDQEHDSVIIMGGQYNKSQSITL 153 (251)
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCcHHHHH-HHHHhCCCCeEEEe-CCHHHH--HHHHhCCCCEEEEECCeEcCCcceeE
Confidence 344667788888888889999999987754 33444333333444 333222 1111 112223211 1110 1
Q ss_pred HHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccCh-------HHHHHHHHHcCcEEEEeCc
Q 011567 226 DSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPL-------DELIRLKEKYRFRVFLDES 283 (483)
Q Consensus 226 ~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L-------~~l~~l~~k~~~~li~DEa 283 (483)
....+.++....+ .+|+-+.++.. .|...+- +.+.+.++ ...+++|-+
T Consensus 154 G~~~~~l~~~~~d-------~aFig~~gi~~-~G~~~~~~~e~~~k~~~~~~s~--~~illaDss 208 (251)
T PRK13509 154 SPQGSENSLYAGH-------WMFTSGKGLTA-DGLYKTDMLTAMAEQKMLSVVG--KLVVLVDSS 208 (251)
T ss_pred CHHHHHHHhCcCC-------EEEECCCcCCC-CcCCCCCHHHHHHHHHHHHHhC--cEEEEEccc
Confidence 1123566665543 78888888875 4766542 22333332 467888864
No 454
>TIGR03853 matur_matur probable metal-binding protein. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulfatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulfur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulfatase/maturase systems.
Probab=22.37 E-value=1.4e+02 Score=22.49 Aligned_cols=47 Identities=19% Similarity=0.198 Sum_probs=32.5
Q ss_pred HHHHHHHHHhhhCCCCEEEecccHHH-HHhhhhhhccCCcEEEEcCCc
Q 011567 156 HLDCEARIAKFLGTPDSILYSYGLST-MFSAIPCFCKKGDLIVADEGV 202 (483)
Q Consensus 156 ~~~l~~~La~~~g~e~~i~~~sG~~a-~~~ai~~~~~~gdiI~~~~~~ 202 (483)
..+|++.+.+.||.+..+-.+|...- ....+.-+.+||++|-.++..
T Consensus 20 ~~~L~~~i~~~FG~~arFhTCSa~~m~a~~Li~FL~~kgKfi~~~~gf 67 (77)
T TIGR03853 20 RESLKAAIEQKFGEDARFHTCSAEGMTADELLQFLLKKGKFIESDGGF 67 (77)
T ss_pred HHHHHHHHHHHhCCCceEeecccccCCHHHHHHHHHHCCCEeecCCcE
Confidence 57899999999998776665555422 233355567889988876654
No 455
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=22.36 E-value=59 Score=31.54 Aligned_cols=23 Identities=22% Similarity=0.343 Sum_probs=19.9
Q ss_pred hHHHHHHHH-HcCcEEEEeCcccc
Q 011567 264 LDELIRLKE-KYRFRVFLDESNSF 286 (483)
Q Consensus 264 L~~l~~l~~-k~~~~li~DEa~s~ 286 (483)
|++|+++|. .++..+|+||+|..
T Consensus 161 l~ql~~W~g~dfdgvivfDEcH~a 184 (303)
T PF13872_consen 161 LDQLVDWCGEDFDGVIVFDECHKA 184 (303)
T ss_pred HHHHHHHHhcCCCceEEeccchhc
Confidence 899999995 46889999999964
No 456
>PF06667 PspB: Phage shock protein B; InterPro: IPR009554 This family consists of several bacterial phage shock protein B (PspB) sequences. The phage shock protein (psp) operon is induced in response to heat, ethanol, osmotic shock and infection by filamentous bacteriophages []. Expression of the operon requires the alternative sigma factor sigma54 and the transcriptional activator PspF. In addition, PspA plays a negative regulatory role, and the integral-membrane proteins PspB and PspC play a positive one [].; GO: 0006355 regulation of transcription, DNA-dependent, 0009271 phage shock
Probab=21.83 E-value=1.5e+02 Score=22.26 Aligned_cols=30 Identities=17% Similarity=0.247 Sum_probs=17.3
Q ss_pred HHHHHHHHhcCCCCCCC-CCCCHHHHHHHHh
Q 011567 45 LVVILFLLSQKSYKPPK-RPLTKKEIDELCD 74 (483)
Q Consensus 45 ~~~~~~~~~~~~~~~~~-~~l~~~e~~~l~~ 74 (483)
+++.+|+++..+.|.+. ..||++|.+.|-+
T Consensus 16 fVap~WL~lHY~sk~~~~~gLs~~d~~~L~~ 46 (75)
T PF06667_consen 16 FVAPIWLILHYRSKWKSSQGLSEEDEQRLQE 46 (75)
T ss_pred HHHHHHHHHHHHHhcccCCCCCHHHHHHHHH
Confidence 44556666654444333 3799887655443
No 457
>PRK00745 4-oxalocrotonate tautomerase; Provisional
Probab=21.39 E-value=2.4e+02 Score=19.65 Aligned_cols=30 Identities=13% Similarity=0.182 Sum_probs=25.8
Q ss_pred eEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Q 011567 451 IRLFVSAAHSEADLVKACESLKRISAVVLR 480 (483)
Q Consensus 451 lRi~~~~~~t~edi~~~~~~l~~~~~~~~~ 480 (483)
++|.+....|.++-.++.+.|.+++.+.+.
T Consensus 4 i~I~~~~grs~eqk~~l~~~it~~l~~~~~ 33 (62)
T PRK00745 4 FHIELFEGRTVEQKRKLVEEITRVTVETLG 33 (62)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 678777778999999999999999888765
No 458
>COG1307 DegV Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.31 E-value=7.4e+02 Score=23.82 Aligned_cols=48 Identities=21% Similarity=0.215 Sum_probs=22.8
Q ss_pred HHHHHHHHHHhhhCC--CCEEEe--cccHHHHHhh---hhhhccCCcEEEEcCCc
Q 011567 155 VHLDCEARIAKFLGT--PDSILY--SYGLSTMFSA---IPCFCKKGDLIVADEGV 202 (483)
Q Consensus 155 ~~~~l~~~La~~~g~--e~~i~~--~sG~~a~~~a---i~~~~~~gdiI~~~~~~ 202 (483)
...++++.+.++... ++.+.. ++|.+....+ ...+..+-++.++|...
T Consensus 65 s~~~~~~~~~~l~~~g~~~vi~i~iSs~LSgty~~a~~a~~~~~~~~v~viDS~~ 119 (282)
T COG1307 65 SPGEFEELFEKLLQKGYDEVISIHISSGLSGTYQSAQLAAELVEGAKVHVIDSKS 119 (282)
T ss_pred CHHHHHHHHHHHHhCCCcEEEEEEcCCCccHHHHHHHHHHHhccCceEEEEcCcc
Confidence 345666666666643 234333 6665443322 22222233555665543
No 459
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=21.27 E-value=1.3e+02 Score=28.55 Aligned_cols=49 Identities=14% Similarity=0.249 Sum_probs=32.2
Q ss_pred CCHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccC-hHHHHHHHHHcCcEEEEeC
Q 011567 223 NDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAP-LDELIRLKEKYRFRVFLDE 282 (483)
Q Consensus 223 ~d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~-L~~l~~l~~k~~~~li~DE 282 (483)
|+.+..+++|.. .-+||+-|-.+..-.+++ +++|.+.+++.++.+++|.
T Consensus 90 ~av~~i~k~L~R-----------lhavVIGPGLGRdp~~~k~i~~iley~~~~dvP~VIDa 139 (306)
T KOG3974|consen 90 NAVDIIEKLLQR-----------LHAVVIGPGLGRDPAILKEIAKILEYLRGKDVPLVIDA 139 (306)
T ss_pred chHhHHHHHHhh-----------eeEEEECCCCCCCHHHHHHHHHHHHHHhcCCCcEEEcC
Confidence 355666776765 335555554433222222 7999999999999999995
No 460
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=21.10 E-value=7.9e+02 Score=24.08 Aligned_cols=125 Identities=19% Similarity=0.131 Sum_probs=61.9
Q ss_pred EEecccHHHHHhh-hhhhc-c-CCc-EEEEcCCchhHHHhHhh-hcCC---eEEEecCCCHHHHHHHHHHhhhhhhhccC
Q 011567 173 ILYSYGLSTMFSA-IPCFC-K-KGD-LIVADEGVHWGIQNGLY-LSRS---TVVYFKHNDMDSLRNTLERVTADNKRAKK 244 (483)
Q Consensus 173 i~~~sG~~a~~~a-i~~~~-~-~gd-iI~~~~~~h~s~~~g~~-~s~~---~v~~~~~~d~~~Le~~l~~~~~~~~~~~~ 244 (483)
++.++|..=+-++ ++-.. + +.+ ++.+|...+.+-...+. +.+. ..+.-+-.|.+.+.+++++...+
T Consensus 3 iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D------ 76 (340)
T COG1088 3 ILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPD------ 76 (340)
T ss_pred EEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCC------
Confidence 4555554433333 23222 2 223 68889998877665543 2232 23333345777788888764332
Q ss_pred ccEEEEEec-----ccCCCC----CccChHHHHHHHHHcCc--EEE---EeCccccccccCCCCccccccCCCCC
Q 011567 245 LRRYIVVEA-----VYQNSG----QIAPLDELIRLKEKYRF--RVF---LDESNSFGVLGRSGRGLTEHCGVPVD 305 (483)
Q Consensus 245 ~~~~iv~e~-----v~~~~G----~i~~L~~l~~l~~k~~~--~li---~DEa~s~g~lg~~G~g~~~~~~v~~~ 305 (483)
.+.=+..|+ +.++.- .+.---.|.+.+++|.. +++ .||+|+- ++.+...++|.-...|.
T Consensus 77 ~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~--l~~~~~~FtE~tp~~Ps 149 (340)
T COG1088 77 AVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGD--LGLDDDAFTETTPYNPS 149 (340)
T ss_pred eEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEecccccccc--ccCCCCCcccCCCCCCC
Confidence 011111222 111100 00013668888888873 332 5999865 44433345555555554
No 461
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=20.78 E-value=3.6e+02 Score=24.36 Aligned_cols=35 Identities=14% Similarity=0.098 Sum_probs=25.5
Q ss_pred ccEEEEEecccCCCCCccChHHHHHHHHHcCcEEEE
Q 011567 245 LRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFL 280 (483)
Q Consensus 245 ~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~ 280 (483)
+..++++++..+ .|.+.|.+.-.++++++|+.++.
T Consensus 113 kvvILLTDG~n~-~~~i~P~~aAa~lA~~~gV~iyt 147 (191)
T cd01455 113 AIVIVLSDANLE-RYGIQPKKLADALAREPNVNAFV 147 (191)
T ss_pred cEEEEEeCCCcC-CCCCChHHHHHHHHHhCCCEEEE
Confidence 345555666554 47788888778999999998853
No 462
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=20.66 E-value=1.6e+02 Score=27.35 Aligned_cols=34 Identities=15% Similarity=0.132 Sum_probs=27.8
Q ss_pred cEEEEEecccCCCCCccChHHHHHHHHHcCcEEEE
Q 011567 246 RRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFL 280 (483)
Q Consensus 246 ~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~ 280 (483)
...+++|=+ +..|.+..++++.+++++|++.++.
T Consensus 173 P~~vicEil-~~dG~ma~~~~l~~fA~~~~l~iis 206 (230)
T PRK00014 173 PAGVLCELM-NADGTMMRGASLERYAAKEGLVALA 206 (230)
T ss_pred ceEEEEEEe-CCCCCccCHHHHHHHHHHcCCcEEE
Confidence 467777764 4459999999999999999998853
No 463
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=20.60 E-value=2.5e+02 Score=30.00 Aligned_cols=23 Identities=26% Similarity=0.377 Sum_probs=20.3
Q ss_pred ChHHHHHHHHHcCcEEEEeCccc
Q 011567 263 PLDELIRLKEKYRFRVFLDESNS 285 (483)
Q Consensus 263 ~L~~l~~l~~k~~~~li~DEa~s 285 (483)
+++++++.|+++|+.+|+|-+..
T Consensus 82 d~~~lv~~~h~~gi~vilD~V~N 104 (551)
T PRK10933 82 DFDELVAQAKSRGIRIILDMVFN 104 (551)
T ss_pred HHHHHHHHHHHCCCEEEEEECCC
Confidence 38999999999999999998743
No 464
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=20.50 E-value=7e+02 Score=23.52 Aligned_cols=25 Identities=16% Similarity=0.084 Sum_probs=18.9
Q ss_pred CCCCCccChHHHHHHHHHcCcEEEE
Q 011567 256 QNSGQIAPLDELIRLKEKYRFRVFL 280 (483)
Q Consensus 256 ~~~G~i~~L~~l~~l~~k~~~~li~ 280 (483)
+..|.-..+.++++.|+++|+.+|+
T Consensus 183 S~sg~~~~~~~~~~~ak~~ga~iI~ 207 (278)
T PRK11557 183 SYSGERRELNLAADEALRVGAKVLA 207 (278)
T ss_pred cCCCCCHHHHHHHHHHHHcCCCEEE
Confidence 4457766788999999999766653
No 465
>COG2256 MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair]
Probab=20.50 E-value=1.9e+02 Score=29.45 Aligned_cols=52 Identities=27% Similarity=0.370 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccChHHHHHHHHHc-----CcEEEEeCccccc
Q 011567 225 MDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKY-----RFRVFLDESNSFG 287 (483)
Q Consensus 225 ~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L~~l~~l~~k~-----~~~li~DEa~s~g 287 (483)
-..|.++|..... ..|.-++.+.+. +.+++++.+-+++. ..+|++||+|-|-
T Consensus 61 KTTlA~liA~~~~--------~~f~~~sAv~~g---vkdlr~i~e~a~~~~~~gr~tiLflDEIHRfn 117 (436)
T COG2256 61 KTTLARLIAGTTN--------AAFEALSAVTSG---VKDLREIIEEARKNRLLGRRTILFLDEIHRFN 117 (436)
T ss_pred HHHHHHHHHHhhC--------CceEEecccccc---HHHHHHHHHHHHHHHhcCCceEEEEehhhhcC
Confidence 3567777766432 457777666542 33455555555443 5899999999763
No 466
>PRK10681 DNA-binding transcriptional repressor DeoR; Provisional
Probab=20.31 E-value=7.2e+02 Score=23.30 Aligned_cols=117 Identities=11% Similarity=0.160 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHhhhCCCCEEEecccHHHHHhhhhhhccCCcEEEEcCCchhHHHhHhh-hcCCeEEEe----cCC-----
Q 011567 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY-LSRSTVVYF----KHN----- 223 (483)
Q Consensus 154 ~~~~~l~~~La~~~g~e~~i~~~sG~~a~~~ai~~~~~~gdiI~~~~~~h~s~~~g~~-~s~~~v~~~----~~~----- 223 (483)
+.-.++++..+++....+.|+..+|+.+.. .++.+....+.-++....+.. ..+. ..+.+++.. ..+
T Consensus 77 ~~K~~IA~~Aa~lI~~g~tIflD~GtT~~~-la~~L~~~~~ltvvTnsl~i~--~~l~~~~~~~villGG~~~~~~~~~~ 153 (252)
T PRK10681 77 EEKRRAAQLAATLVEPNQTLFFDCGTTTPW-IIEAIDNELPFTAVCYSLNTF--LALQEKPHCRAILCGGEFHASNAIFK 153 (252)
T ss_pred HHHHHHHHHHHhhcCCCCEEEEECCccHHH-HHHhcCCCCCeEEEECCHHHH--HHHhhCCCCEEEEECcEEecCcceee
Confidence 345677888888888889999999987655 344444433333333333221 1111 122233221 111
Q ss_pred CHHHHHHHHHHhhhhhhhccCccEEEEEecccCCCCCccCh-------HHHHHHHHHcCcEEEEeCc
Q 011567 224 DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPL-------DELIRLKEKYRFRVFLDES 283 (483)
Q Consensus 224 d~~~Le~~l~~~~~~~~~~~~~~~~iv~e~v~~~~G~i~~L-------~~l~~l~~k~~~~li~DEa 283 (483)
... -.+.|+....+ .+|+-+.++....|...+- +.+++.++ ...+++|-+
T Consensus 154 G~~-~~~~l~~~~~D-------~afig~~gi~~~~G~~~~~~~ea~vk~~~~~~a~--~~illaD~s 210 (252)
T PRK10681 154 PLD-FQQTLDNICPD-------IAFYSAAGVHVSKGATCFNLEELPVKHWAMAMAQ--KHVLVVDHS 210 (252)
T ss_pred CHH-HHHHHHhhCCC-------EEEEeCceecCCCCcCCCCHHHHHHHHHHHHhhC--cEEEEEccc
Confidence 122 23556665554 7888888887666765542 22333333 468888865
No 467
>PF04989 CmcI: Cephalosporin hydroxylase; InterPro: IPR007072 This entry contains Rhamnosyl O-methyltransferase which catalyses the O-methylation of the hydroxyl group located on C-2 of the first rhamnosyl residue linked to the phenolic group of glycosylated phenolphthiocerol dimycocerosates (PGL) and p-hydroxybenzoic acid derivatives (p-HBAD) []. Members of this family are about 220 amino acids long. It also includes the CmcI protein O85726 from SWISSPROT, which is presumed to represent the cephalosporin-7--hydroxylase []. However this has not been experimentally verified.; GO: 0008168 methyltransferase activity, 0008610 lipid biosynthetic process; PDB: 2BR4_B 2BR3_E 2BR5_E 2BM8_J 2BM9_E.
Probab=20.21 E-value=72 Score=29.14 Aligned_cols=101 Identities=13% Similarity=0.117 Sum_probs=40.4
Q ss_pred ecccHHHHHhhh-hhhccCCcEEEEcCCchhHHHhHhhh----cCCeEEEecCCCHHHHHHHHHHhhhhhhhccCccEEE
Q 011567 175 YSYGLSTMFSAI-PCFCKKGDLIVADEGVHWGIQNGLYL----SRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYI 249 (483)
Q Consensus 175 ~~sG~~a~~~ai-~~~~~~gdiI~~~~~~h~s~~~g~~~----s~~~v~~~~~~d~~~Le~~l~~~~~~~~~~~~~~~~i 249 (483)
+.+|+....+-+ ..+..++.++-+|-.-...-..+... .+.+++.-..+|++.++++...... ..+.+|
T Consensus 42 ~~GGSli~~A~ml~~~~~~~~VigiDIdir~~~~~a~e~hp~~~rI~~i~Gds~d~~~~~~v~~~~~~------~~~vlV 115 (206)
T PF04989_consen 42 AHGGSLIFWASMLELLGGKGKVIGIDIDIRPHNRKAIESHPMSPRITFIQGDSIDPEIVDQVRELASP------PHPVLV 115 (206)
T ss_dssp TTSHHHHHHHHHHHHTT---EEEEEES-GTT--S-GGGG----TTEEEEES-SSSTHHHHTSGSS----------SSEEE
T ss_pred CCCchHHHHHHHHHHhCCCceEEEEeCCcchhchHHHhhccccCceEEEECCCCCHHHHHHHHHhhcc------CCceEE
Confidence 355655544433 44446777777776332222233333 4555555555676666554322111 135566
Q ss_pred EEecccCCCCCccChHHHHHHHHHcCcEEEEe
Q 011567 250 VVEAVYQNSGQIAPLDELIRLKEKYRFRVFLD 281 (483)
Q Consensus 250 v~e~v~~~~G~i~~L~~l~~l~~k~~~~li~D 281 (483)
+.++-.+..-.+..|+....+..+=+.+++.|
T Consensus 116 ilDs~H~~~hvl~eL~~y~plv~~G~Y~IVeD 147 (206)
T PF04989_consen 116 ILDSSHTHEHVLAELEAYAPLVSPGSYLIVED 147 (206)
T ss_dssp EESS----SSHHHHHHHHHHT--TT-EEEETS
T ss_pred EECCCccHHHHHHHHHHhCccCCCCCEEEEEe
Confidence 66665444322223444444444433444444
No 468
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=20.06 E-value=1.7e+02 Score=26.92 Aligned_cols=34 Identities=18% Similarity=0.428 Sum_probs=28.0
Q ss_pred cEEEEEecccCCCCCccChHHHHHHHHHcCcEEEE
Q 011567 246 RRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFL 280 (483)
Q Consensus 246 ~~~iv~e~v~~~~G~i~~L~~l~~l~~k~~~~li~ 280 (483)
...+++|=+ +..|.+..++++.+++++|++.++.
T Consensus 168 p~~vicEil-~~dG~ma~~~~~~~fA~~~~l~~is 201 (214)
T PRK01792 168 EAGVICEIT-NDDGTMARTPEIVEFAKKFGYAVVT 201 (214)
T ss_pred ceEEEEEEe-cCCCCccCHHHHHHHHHHcCCcEEE
Confidence 467777765 4559999999999999999998853
Done!