RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 011567
(483 letters)
>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase
{Escherichia coli [TaxId: 562]}
Length = 401
Score = 223 bits (568), Expect = 1e-68
Identities = 109/385 (28%), Positives = 181/385 (47%), Gaps = 20/385 (5%)
Query: 92 EPPVLESAAGPH-TIISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFY 150
E ++ SA T+ G V+NF + NYLGL H L+ + + ++ +G G R
Sbjct: 27 EERIITSAQQADITVADGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFIC 86
Query: 151 GTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL 210
GT D H + E ++A FLG D+ILYS D I++D H I +G+
Sbjct: 87 GTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGV 146
Query: 211 YLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRL 270
L ++ + +NDM L L+ R I + V+ G IA L + L
Sbjct: 147 RLCKAKRYRYANNDMQELEARLKEAREAGAR----HVLIATDGVFSMDGVIANLKGVCDL 202
Query: 271 KEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA-TEGGFCTGSA 329
+KY V +D+S++ G +G +GRG E+C V ++DI+T +G AL GG+
Sbjct: 203 ADKYDALVMVDDSHAVGFVGENGRGSHEYCDVM-GRVDIITGTLGKALGGASGGYTAARK 261
Query: 330 RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHG 389
VV+ R S Y+FS SL P + +A+I ++++E +L +L N R +S
Sbjct: 262 EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGF 321
Query: 390 LSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPV 449
+ + I+ ++L D + + A L+++G++V ++ K +
Sbjct: 322 TLAGA--DHAIIPVML--------GDAVVAQKFAR-ELQKEGIYVTGFFYPVVPKGQ--A 368
Query: 450 GIRLFVSAAHSEADLVKACESLKRI 474
IR +SAAH+ + +A E+ RI
Sbjct: 369 RIRTQMSAAHTPEQITRAVEAFTRI 393
>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase
(8-amino-7-oxonanoate synthase, AONS) {Escherichia coli
[TaxId: 562]}
Length = 383
Score = 191 bits (486), Expect = 6e-57
Identities = 90/389 (23%), Positives = 157/389 (40%), Gaps = 33/389 (8%)
Query: 92 EPPVLESAAGPHTIISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYG 151
+ AG + ++ +NF+S +YLGL H +++ + E++G+GS G G
Sbjct: 21 RRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSG 80
Query: 152 TIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY 211
VH E +A++LG ++L+ G + + I K D I AD H +
Sbjct: 81 YSVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAAS 140
Query: 212 LSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLK 271
LS S + F HND+ L L + +V E V+ G APL E+ ++
Sbjct: 141 LSPSQLRRFAHNDVTHLARLLASPCPGQ-------QMVVTEGVFSMDGDSAPLAEIQQVT 193
Query: 272 EKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARV 331
+++ + +D+++ GV+G GRG V + + + G G S+ V
Sbjct: 194 QQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVT---FGKGFGVSGAAVLCSSTV 250
Query: 332 VDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLS 391
D+ + ++S S+PP A A ++ V+ + + K I R
Sbjct: 251 ADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPF 310
Query: 392 IASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPV-- 449
++ S I LI+ D +A+ L++ G +V R P
Sbjct: 311 TLADSCSAIQPLIV--------GDNSRALQLAE-KLRQQGCWVTAI--------RPPTVP 353
Query: 450 ----GIRLFVSAAHSEADLVKACESLKRI 474
+RL ++AAH D+ + E L
Sbjct: 354 AGTARLRLTLTAAHEMQDIDRLLEVLHGN 382
>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter
capsulatus [TaxId: 1061]}
Length = 396
Score = 176 bits (446), Expect = 5e-51
Identities = 94/397 (23%), Positives = 158/397 (39%), Gaps = 40/397 (10%)
Query: 94 PVLESAAGPH-------TIISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGP 146
+E G +++ + +YLG+ H +L + ALE G GS G
Sbjct: 23 IDIEREKGAFPKAQWNRPDGGKQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGT 82
Query: 147 RGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKK--GDLIVADEGVHW 204
R GT H EA IA ++++S + + + G +I +D H
Sbjct: 83 RNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHA 142
Query: 205 GIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPL 264
+ G+ + F+HND+ LR + I E+VY G P+
Sbjct: 143 SMIEGIKRNAGPKRIFRHNDVAHLREL------IAADDPAAPKLIAFESVYSMDGDFGPI 196
Query: 265 DELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGF 324
E+ + E++ ++DE ++ G+ G G G+ E G+ +IDI + A GG+
Sbjct: 197 KEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLM-HRIDIFNGTLAKAYGVFGGY 255
Query: 325 CTGSARVVDHQRLSSSGYVFSASLPPYLASA--AITAIDVLEENPDLITKLKKNTAILRT 382
SAR+VD R + G++FS SLPP +A+ A A E L + + +L+
Sbjct: 256 IAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKM 315
Query: 383 GLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVV-----TS 437
L G+ I + S IV +++ D + ++D L + GV+V T
Sbjct: 316 RLKA-LGMPIIDH-GSHIVPVVI--------GDPVHTKAVSDMLLSDYGVYVQPINFPTV 365
Query: 438 KRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474
R RL R S H + ++ +
Sbjct: 366 PR---GTERL----RFTPSPVHDLKQIDGLVHAMDLL 395
>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS)
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 364
Score = 83.3 bits (204), Expect = 5e-18
Identities = 47/365 (12%), Positives = 100/365 (27%), Gaps = 35/365 (9%)
Query: 127 KLLESCTSALEKYGVGS------CGPR-GFYGTIDVHLDCEARIAKFLGTPDSILYSYGL 179
KL E AL ++G G R T +H ++ KFLG + + +
Sbjct: 13 KLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCDVARVTNGAR 72
Query: 180 STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADN 239
F+ + KK +V DE H+ + + D T E
Sbjct: 73 EAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTI 132
Query: 240 KRAKKLRRYIVVEAVYQNS--GQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLT 297
+ KK ++ Y + G + + ++ ++ +Y + ++ + + G +
Sbjct: 133 EETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRM-------- 184
Query: 298 EHCGVPVDKIDIVTAAMGHALAT-EGGFCTGSARVVDHQRLSSSGYVFSAS------LPP 350
+ IV + A+ G + S Y
Sbjct: 185 PVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARG 244
Query: 351 YLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPE-SPIVFLILEKST 409
+ + + E + + + + + NP ++F E
Sbjct: 245 ATIITLMASFPHVRERIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAEVLY 304
Query: 410 GSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACE 469
K + LK + + + S+ ++
Sbjct: 305 EISKKAKGGRFFLYR-ELKSRKIHGIK---------PGLTRYFKLSTYGLSDEEVDYVLN 354
Query: 470 SLKRI 474
+ K I
Sbjct: 355 AFKEI 359
>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas
putida [TaxId: 303]}
Length = 345
Score = 80.6 bits (197), Expect = 3e-17
Identities = 41/370 (11%), Positives = 91/370 (24%), Gaps = 41/370 (11%)
Query: 113 NFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDS 172
F+S N G ++ ++ YGT ++ + + +
Sbjct: 6 GFSSDNIAGA--SPEVAQALVKHSSGQAGP-------YGTDELTAQVKRKFCEIFERDVE 56
Query: 173 ILY-SYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRST--------VVYFKHN 223
+ G + + I H +
Sbjct: 57 VFLVPTGTAANALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKL 116
Query: 224 DMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDES 283
D+ LR D + I + + ++ + + + + +D S
Sbjct: 117 DIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGS 176
Query: 284 NSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYV 343
L G E + A + + + +
Sbjct: 177 RFANALVSLGCSPAEMTWKA-GVDALSFGATKNGVLAAEAIVLFNTSLATEMSYRRKRAG 235
Query: 344 FSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFL 403
+S +L++ + + K L GL + G+ + E+ I+F
Sbjct: 236 HLSSKMRFLSAQIDAYLT-DDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFC 294
Query: 404 ILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEAD 463
L+ + D AL + G + P +R S A + D
Sbjct: 295 RLD-------------SAMID-ALLKAGFGFYHDRWG-------PNVVRFVTSFATTAED 333
Query: 464 LVKACESLKR 473
+ ++
Sbjct: 334 VDHLLNQVRL 343
>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase
{Thermotoga maritima [TaxId: 2336]}
Length = 343
Score = 74.8 bits (182), Expect = 3e-15
Identities = 40/329 (12%), Positives = 92/329 (27%), Gaps = 24/329 (7%)
Query: 150 YGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG 209
YG + E A+ G ++ G +I ++GD ++ + H
Sbjct: 30 YGEDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEV 89
Query: 210 LYLSRSTVVYFKHNDMDSLRNTL----ERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLD 265
++ + V + + + N + + ++ G++ PL+
Sbjct: 90 GAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLE 149
Query: 266 ELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFC 325
+ + + + + S ++ A G
Sbjct: 150 NIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVV 209
Query: 326 TGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLS 385
G ++ R + A I L + D + + +N L L
Sbjct: 210 VGDRDFIERARKARKMLGGGMRQA---GVLAAAGIIALTKMVDRLKEDHENARFLALKLK 266
Query: 386 DIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKC 445
+I + ++ +V L + + + AL+ GV +
Sbjct: 267 EIGYSVNPEDVKTNMVILRTDNLKVNAH-------GFIE-ALRNSGVLANAVSDT----- 313
Query: 446 RLPVGIRLFVSAAHSEADLVKACESLKRI 474
IRL S D+ +A +++
Sbjct: 314 ----EIRLVTHKDVSRNDIEEALNIFEKL 338
>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain
{Lactobacillus sp., strain 30a [TaxId: 1591]}
Length = 462
Score = 62.0 bits (149), Expect = 7e-11
Identities = 52/364 (14%), Positives = 91/364 (25%), Gaps = 42/364 (11%)
Query: 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSA-IPCFCKKGDLIVADEGVHWGIQNGLYL 212
+ E A+ + G S + GDL++ D H + N
Sbjct: 66 GPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALA 125
Query: 213 SRSTVVYFKHNDMDSLRNTLERVTADNKRA---------------KKLRRYIVVEAVYQN 257
+ + + +D K + V +
Sbjct: 126 MAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTY 185
Query: 258 SGQIAPLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGV----PVDKIDIVT-- 311
G I E+++ + D + + + P D IV
Sbjct: 186 DGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQS 245
Query: 312 -------AAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSASLPPYL---ASAAITAID 361
+ + + G R DH+ ++S +F ++ P Y A A+
Sbjct: 246 VHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAMQ 305
Query: 362 VLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPE--SPIVFLILEKSTGSMKNDLQLL 419
E L L T R L + P + + + + D
Sbjct: 306 EGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRF 365
Query: 420 EDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 479
E A W E + +D P L + E + I A L
Sbjct: 366 EKGAKWHAYEG----YGDNQYYVD----PNKFMLTTPGINPETGDYEDFGVPATIVANYL 417
Query: 480 RDRN 483
RD
Sbjct: 418 RDHG 421
>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase
{Leishmania major [TaxId: 5664]}
Length = 340
Score = 60.7 bits (145), Expect = 1e-10
Identities = 50/366 (13%), Positives = 99/366 (27%), Gaps = 32/366 (8%)
Query: 113 NFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDS 172
+F + +G+ H K+L+ G YG I + L PD+
Sbjct: 3 SFVNDYSVGM--HPKILDLMARDNMTQHAG-------YGQDSHCAKAARLIGELLERPDA 53
Query: 173 ILY--SYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRN 230
++ S G T A + + ++A + H + + D
Sbjct: 54 DVHFISGGTQTNLIACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCPDGKLR 113
Query: 231 TLERVTADNKRAKKLR-RYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVFLDESNSFGVL 289
+ +A ++ + +V + + L L
Sbjct: 114 VADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARL 173
Query: 290 GRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSASLP 349
+ + +G A + + +L
Sbjct: 174 ASALSSPVNDLTLADIARLTDMFYIGATKAGGMFGEALIILNDALKPNARHLIKQRGALM 233
Query: 350 PYLASAAITAIDVLEENPDL-ITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKS 408
I ++++N + A + + G+ +A S +F ILE
Sbjct: 234 AKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGLEACGIRLAWPSASNQLFPILE-- 291
Query: 409 TGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKAC 468
+M +L D+ +DG +RL S A E + +
Sbjct: 292 -NTMIAELNNDFDMYTVEPLKDG----------------TCIMRLCTSWATEEKECHRFV 334
Query: 469 ESLKRI 474
E LKR+
Sbjct: 335 EVLKRL 340
>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola
[TaxId: 549]}
Length = 456
Score = 50.2 bits (119), Expect = 3e-07
Identities = 40/351 (11%), Positives = 84/351 (23%), Gaps = 40/351 (11%)
Query: 160 EARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVAD---------------EGVHW 204
E + + G + G K G + + V
Sbjct: 81 EKTVKELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMYFTTTRFHQEKNGATFVDI 140
Query: 205 GIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPL 264
+ + + D++ L ++ A+N L + V +A +
Sbjct: 141 VRDEAHD-ASLNLPFKGDIDLNKLATLIKEKGAENIAYICLA--VTVNLAGGQPVSMANM 197
Query: 265 DELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCGVPVDKI--------DIVT--AAM 314
+ + Y ++F D + + V + I D T
Sbjct: 198 RAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKK 257
Query: 315 GHALATEGGFCTGSARVVDHQR-LSSSGYVFSASLPPYLASAAITAIDVLE-ENPDLITK 372
+ G C + + L + AI + E + I
Sbjct: 258 DCLVNIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEH 317
Query: 373 LKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGV 432
K L L + I VFL + + D + +A E GV
Sbjct: 318 RVKQVRYLGDKLREAGV-PIVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGV 376
Query: 433 FVVTSKRSMLDKCRLPVGIRLFV---------SAAHSEADLVKACESLKRI 474
+ + + ++ A + + + ++
Sbjct: 377 RSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKL 427
>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium
lapideum [TaxId: 32060]}
Length = 388
Score = 47.5 bits (112), Expect = 2e-06
Identities = 56/375 (14%), Positives = 114/375 (30%), Gaps = 26/375 (6%)
Query: 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKF 166
G +V +F++ + ++E+ +ALE+ G + R
Sbjct: 28 EGIDVCSFSAGE-PDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGL 86
Query: 167 LGTPDSILYSYGLS-TMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDM 225
D+IL + G ++F+ + + GD ++ + L+ T V
Sbjct: 87 CYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVE 146
Query: 226 DSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKE---KYRFRVFLDE 282
+ + E++ KL +V +G + DE+ + + + V DE
Sbjct: 147 TQFKVSPEQIRQAITPKTKL---LVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDE 203
Query: 283 SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSS 339
+ + + +V + A G GF G +V
Sbjct: 204 IYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATKIQ 263
Query: 340 SGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESP 399
+ + A + +++ + + L+ + GL +
Sbjct: 264 GHSTSNVCTFAQYGAIAAYENS-QDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAF 322
Query: 400 IVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAH 459
+F + K+ S D L + V V D C IRL S A
Sbjct: 323 YMFPSIAKTGRSS-------LDFCSELLDQHQVATVPGAAFGADDC-----IRL--SYAT 368
Query: 460 SEADLVKACESLKRI 474
+ + E L++
Sbjct: 369 DLDTIKRGMERLEKF 383
>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase
(aminotransferase) {Synechococcus sp., strain GR6
[TaxId: 1131]}
Length = 427
Score = 46.8 bits (110), Expect = 4e-06
Identities = 61/425 (14%), Positives = 124/425 (29%), Gaps = 77/425 (18%)
Query: 92 EPPVLESAAGPHTI-ISGKEVVNFASANYLGLIGH--EKLLESCTSALEKYGVGSCGPRG 148
+P V + + + G +++ + GH +++E+ A+EK
Sbjct: 34 QPIVFDRVKDAYAWDVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTS------- 86
Query: 149 FYGTIDVHLDCEARIAKFLGTPDSILYS-YGLSTMFSAIPCFCK--KGDLIVADEGVHWG 205
F + + + + + + + G + + D I+ EG + G
Sbjct: 87 FGAPCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRLMRAYTGRDKIIKFEGCYHG 146
Query: 206 IQNGL--------------------YLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKL 245
+ + + + +ND+++++
Sbjct: 147 HADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAE-NPGEIAG--- 202
Query: 246 RRYIVVEAVYQNSGQIAP----LDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHCG 301
+++E + NSG I P L+ L + ++ + DE + G G
Sbjct: 203 ---VILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMT---------GFRIAYG 250
Query: 302 VPVDKIDIVTAAMGHALATEGGFC----TGSARVVDHQRLSSSGYVFSASLPPYLASAAI 357
+K + GG G ++ + Y LA A
Sbjct: 251 GVQEKFGVTPDLTTLGKIIGGGLPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAG 310
Query: 358 TAIDVLEENPDLITKLKKNTAILRTGLSDI-----HGLSIASNPESPIVFLILEKSTG-- 410
L P L + T L GL I H F
Sbjct: 311 IKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYE 370
Query: 411 -SMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACE 469
+ K+DLQ L++ G+++ S+ F S AH+E D+
Sbjct: 371 DAKKSDLQKFSRFHRGMLEQ-GIYLAPSQF-----------EAGFTSLAHTEEDIDATLA 418
Query: 470 SLKRI 474
+ + +
Sbjct: 419 AARTV 423
>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase,
GABA-aminotransferase {Escherichia coli [TaxId: 562]}
Length = 425
Score = 43.3 bits (101), Expect = 5e-05
Identities = 63/416 (15%), Positives = 120/416 (28%), Gaps = 53/416 (12%)
Query: 93 PPVLESAAGPHTI-ISGKEVVNFASANYLGLIGH--EKLLESCTSALEKYGVGSCGPRGF 149
P + A + G+E ++FA + GH K++ + + L+K F
Sbjct: 23 PIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTC-----F 77
Query: 150 YGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKG------DLIVADEGVH 203
I D + ++T A+ K +A G +
Sbjct: 78 QVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGAY 137
Query: 204 WGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRY--------------- 248
G + V + + +
Sbjct: 138 HGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPE 197
Query: 249 ----IVVEAVYQNSGQI----APLDELIRLKEKYRFRVFLDESNSFGVLGRSGRGLTEHC 300
IV+E V G A + L L +++ + DE G E
Sbjct: 198 DIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQ-SGAGRTGTLFAMEQM 256
Query: 301 GVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAI 360
GV D+ T A A TG A V+D G ++ + P AA+ +
Sbjct: 257 GV---APDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYAGN--PIACVAALEVL 311
Query: 361 DVLEENPDLITKLKKNTAIL--RTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQL 418
V E+ L + +++ H ++ + L + K D +L
Sbjct: 312 KVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKPDAKL 371
Query: 419 LEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 474
+I A + G+ +++ +R+ V +A + + E + +
Sbjct: 372 TAEIVARARDK-GLILLSCGPY-------YNVLRILVPLTIEDAQIRQGLEIISQC 419
>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium
[TaxId: 90371]}
Length = 376
Score = 40.7 bits (94), Expect = 3e-04
Identities = 29/141 (20%), Positives = 51/141 (36%), Gaps = 8/141 (5%)
Query: 148 GFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF-CKKGDLIVADEGVHWGI 206
G+ T + + EA + G ++ S + M A+ +GD ++
Sbjct: 25 GWITTGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVST 84
Query: 207 QNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDE 266
N + L + V D D+L T E + + I+ G A LD
Sbjct: 85 LNMIVLLGANPVMV-DVDRDTLMVTPEHI---EAAITPQTKAIIPVHYA---GAPADLDA 137
Query: 267 LIRLKEKYRFRVFLDESNSFG 287
+ L E+Y V D +++ G
Sbjct: 138 IYALGERYGIPVIEDAAHATG 158
>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas
putida [TaxId: 303]}
Length = 392
Score = 40.5 bits (94), Expect = 4e-04
Identities = 21/132 (15%), Positives = 45/132 (34%), Gaps = 6/132 (4%)
Query: 160 EARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVY 219
EAR+A G + + G+ + S + + GD ++ ++ L+
Sbjct: 65 EARMASLEGGEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGV 124
Query: 220 FKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVF 279
+ + LE R I E+ + +A + + ++ K+ V
Sbjct: 125 KLRHVDMADLQALEAAMTPATRV------IYFESPANPNMHMADIAGVAKIARKHGATVV 178
Query: 280 LDESNSFGVLGR 291
+D + L R
Sbjct: 179 VDNTYCTPYLQR 190
>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas
vaginalis, MGL2 [TaxId: 5722]}
Length = 331
Score = 36.0 bits (82), Expect = 0.009
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 160 EARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWG 205
E +IAK + G+ + +++ F K GD +++D+ ++
Sbjct: 4 EGKIAKLEHAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGC 49
>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus
furiosus [TaxId: 2261]}
Length = 395
Score = 34.9 bits (79), Expect = 0.020
Identities = 48/392 (12%), Positives = 106/392 (27%), Gaps = 42/392 (10%)
Query: 108 GKEVVNFASAN--YLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAK 165
G +V+ + E + E+ A+++ +YG + + I +
Sbjct: 29 GIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKE-------GHNYYGDSEGLPELRKAIVE 81
Query: 166 FLGTPDSI--------LYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTV 217
+ + + + + GD I+ + +
Sbjct: 82 REKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKP 141
Query: 218 VYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFR 277
V ++ + + + ++ + K I L+E++ + +Y
Sbjct: 142 VEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIP 201
Query: 278 VFLDESNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRL 337
V DE D IV + G V +L
Sbjct: 202 VISDEIYDLMTYEGEHISPGSLTK---DVPVIVMNGLSKVYFATGWRLGYMYFVDPENKL 258
Query: 338 S-------SSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 390
S + P +A ++ + + KLK+ + L++I G+
Sbjct: 259 SEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGI 318
Query: 391 SIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVG 450
S + +F +E KND ++ L V V
Sbjct: 319 STTKPQGAFYIFPKIEVGPW--KND----KEFVLDVLHNAHVLFVHGSGFGEYGAGH--- 369
Query: 451 IRLFVSAAHSEADLVKACESLKRISAVVLRDR 482
R L +A + ++ +++R
Sbjct: 370 FRA--VFLPPIEILEEAMDRFEK----FMKER 395
>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL
{Escherichia coli [TaxId: 562]}
Length = 382
Score = 33.2 bits (74), Expect = 0.065
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 402 FLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSE 461
FL+++ S S +D + W +E GV + D IRL A E
Sbjct: 317 FLLVDYSAVSTLDD----VEFCQWLTQEHGVAAIPLSVFCADP-FPHKLIRL--CFAKKE 369
Query: 462 ADLVKACESLKRI 474
+ L+ A E L+++
Sbjct: 370 STLLAAAERLRQL 382
>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I
{Human (Homo sapiens) [TaxId: 9606]}
Length = 418
Score = 33.2 bits (74), Expect = 0.075
Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Query: 420 EDIADWALKEDGVFVV--TSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 473
W +K G+ + + S+ + IR EA L E L++
Sbjct: 361 RRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRF--CFVKDEATLQAMDEKLRK 414
>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma
cruzi [TaxId: 5693]}
Length = 412
Score = 30.6 bits (67), Expect = 0.41
Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 7/72 (9%)
Query: 402 FLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSE 461
++ + D++ + + L+E+ V V+ RL +
Sbjct: 341 MYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGF-----TRL--TTTRPV 393
Query: 462 ADLVKACESLKR 473
+A E +K
Sbjct: 394 EVYREAVERIKA 405
>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 380
Score = 30.2 bits (67), Expect = 0.53
Identities = 20/124 (16%), Positives = 45/124 (36%), Gaps = 7/124 (5%)
Query: 160 EARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVY 219
E+ +AK + ++ G++ SA+ K G+ IVA + V+ G
Sbjct: 55 ESLLAKLDKADRAFCFTSGMA-ALSAVTHLIKNGEEIVAGDDVYGGSDR------LLSQV 107
Query: 220 FKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRLKEKYRFRVF 279
+ + R ++ + + +E+ QI+ + ++ + V
Sbjct: 108 VPRSGVVVKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVL 167
Query: 280 LDES 283
+D S
Sbjct: 168 VDNS 171
>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA
synthase) {Amycolatopsis mediterranei [TaxId: 33910]}
Length = 384
Score = 29.7 bits (65), Expect = 0.79
Identities = 7/68 (10%), Positives = 16/68 (23%), Gaps = 1/68 (1%)
Query: 160 EARIAKFLGTPDSILYSYGLSTMFSAIPCF-CKKGDLIVADEGVHWGIQNGLYLSRSTVV 218
E A G ++ + G + A+ G ++ + V
Sbjct: 40 EREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQAAQRLGAVTV 99
Query: 219 YFKHNDMD 226
+
Sbjct: 100 PVDVDAAT 107
>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus
scrofa), cytosolic form [TaxId: 9823]}
Length = 412
Score = 29.5 bits (65), Expect = 0.92
Identities = 32/361 (8%), Positives = 87/361 (24%), Gaps = 33/361 (9%)
Query: 92 EPPVLESAAGPHTIISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYG 151
+P VL I+ +N YL ++G + + +G P
Sbjct: 46 QPWVLPVVRKVEQRIANNSSLNHE---YLPILGLAEFRT----CASRLALGDDSPALQEK 98
Query: 152 TIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY 211
+ A +G + K +
Sbjct: 99 RVGGVQSLGGTGALRIG----------AEFLARWYNGTNNKDTPVYVSSPTWENHNGVFT 148
Query: 212 LSRSTVV-YFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDEL--- 267
+ + +++ D + L+ +D + A + +++ + +G ++
Sbjct: 149 TAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQI 208
Query: 268 IRLKEKYRFRVFLDE---------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL 318
+ ++ F D R
Sbjct: 209 ASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVG 268
Query: 319 ATEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTA 378
+ + ++ V ++ P A + E + +K
Sbjct: 269 NLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMAD 328
Query: 379 ILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSK 438
+ + S++ A + M + L ++ + + ++++ S
Sbjct: 329 RILSMRSELRARLEALKTPGTWNHI---TDQIGMFSFTGLNPKQVEYLINQKHIYLLPSG 385
Query: 439 R 439
R
Sbjct: 386 R 386
>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I
{Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}
Length = 418
Score = 29.0 bits (63), Expect = 1.3
Identities = 10/70 (14%), Positives = 23/70 (32%)
Query: 404 ILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEAD 463
+ K + + D + W K G+ + + + + + +
Sbjct: 344 LDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDEN 403
Query: 464 LVKACESLKR 473
L KA E L++
Sbjct: 404 LQKAAEILRK 413
>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT
{Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}
Length = 361
Score = 28.9 bits (63), Expect = 1.4
Identities = 16/137 (11%), Positives = 43/137 (31%), Gaps = 7/137 (5%)
Query: 153 IDVHLDCEARIAKFLGTPDS--ILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL 210
VH + +AR+ LG P +L+ G ++ A+ + + G
Sbjct: 47 EAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLK-----EGQTANYVMTGS 101
Query: 211 YLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIRL 270
+ S++ D ++ + ++++ ++ S + +
Sbjct: 102 WASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQDNAAYLHLTSNETIEGAQFKAF 161
Query: 271 KEKYRFRVFLDESNSFG 287
+ + D S+
Sbjct: 162 PDTGSVPLIGDMSSDIL 178
>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter
freundii [TaxId: 546]}
Length = 397
Score = 28.5 bits (63), Expect = 1.9
Identities = 9/49 (18%), Positives = 22/49 (44%)
Query: 160 EARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN 208
E ++A + + G+S + + + C++GD IV+ ++
Sbjct: 69 EKKLAVLERGEAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHA 117
>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT
{Escherichia coli [TaxId: 562]}
Length = 397
Score = 28.0 bits (61), Expect = 3.0
Identities = 34/311 (10%), Positives = 82/311 (26%), Gaps = 34/311 (10%)
Query: 178 GLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTA 237
G + + + + + V + D + + A
Sbjct: 106 GALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLA 165
Query: 238 DNKRAKKLRRYIVVEAVYQNSGQIAP---LDELIRLKEKYRFRVFLDESNSFGVLGRSGR 294
K ++ + +G D +I + + FLD + G
Sbjct: 166 TLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEED 225
Query: 295 GLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDH--------QRLSSSGYV 343
+V+ + + G G + + + Y
Sbjct: 226 AYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYS 285
Query: 344 FSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFL 403
+ + +A + + + +++ +R L LS PE +L
Sbjct: 286 SPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVK--VLS-TEMPERNFDYL 342
Query: 404 ILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEAD 463
+ M + L D +E GV+++ R+ V A + A+
Sbjct: 343 ---LNQRGMFSYTGLSAAQVDRLREEFGVYLIA-------------SGRMCV-AGLNTAN 385
Query: 464 LVKACESLKRI 474
+ + ++ +
Sbjct: 386 VQRVAKAFAAV 396
>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c)
{Campylobacter jejuni [TaxId: 197]}
Length = 374
Score = 27.7 bits (60), Expect = 3.1
Identities = 4/40 (10%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 159 CEARIAKFLGTPDSILYSYGLSTMFSAIPCF-CKKGDLIV 197
E + + + +++ + + + A+ K+ D+++
Sbjct: 26 FEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVL 65
>d2zd1b1 e.8.1.2 (B:5-428) HIV-1 reverse transcriptase {Human
immunodeficiency virus type 1 [TaxId: 11676]}
Length = 424
Score = 27.6 bits (61), Expect = 3.8
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Query: 58 KPPK---RPLTK---KEIDELCDEWVPESLIPPIIEEMRCEPPVL 96
PK PLT+ K + E+C E E I I E PV
Sbjct: 13 DGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF 57
>d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo
sapiens), beta isoform [TaxId: 9606]}
Length = 294
Score = 27.3 bits (60), Expect = 3.8
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 11/62 (17%)
Query: 47 VILFLLSQKSYKPPKR-PLTKKEIDELCDEWVPESLIPPIIEEMRCEPPVLESAAGPHTI 105
+I LL + KP K L + EI LC + E +P +LE A P I
Sbjct: 7 IIQRLLEVRGSKPGKNVQLQENEIRGLCLK---------SREIFLSQPILLELEA-PLKI 56
Query: 106 IS 107
Sbjct: 57 CG 58
>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT
{Bacillus alcalophilus [TaxId: 1445]}
Length = 360
Score = 27.3 bits (59), Expect = 3.9
Identities = 15/137 (10%), Positives = 36/137 (26%), Gaps = 9/137 (6%)
Query: 153 IDVHLDCEARIAKFLGTPDS---ILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG 209
+VH + + + L P+ + G S F+ +P I + G
Sbjct: 47 EEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGTI------GNYVLTG 100
Query: 210 LYLSRSTVVYFKHNDMDSLRNTLERVTADNKRAKKLRRYIVVEAVYQNSGQIAPLDELIR 269
+ ++ + +T + + ++ S +
Sbjct: 101 SWSEKALKEAKLLGETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQN 160
Query: 270 LKEKYRFRVFLDESNSF 286
E + D S+
Sbjct: 161 FPEINHAPLIADMSSDI 177
>d1hara_ e.8.1.2 (A:) HIV-1 reverse transcriptase {Human
immunodeficiency virus type 1 [TaxId: 11676]}
Length = 216
Score = 26.1 bits (57), Expect = 9.1
Identities = 13/45 (28%), Positives = 15/45 (33%), Gaps = 6/45 (13%)
Query: 58 KPPK---RPLTK---KEIDELCDEWVPESLIPPIIEEMRCEPPVL 96
PK PLT + +C E E I I E PV
Sbjct: 17 DGPKVAQWPLTAAKIAALVAICTEMEKEGKISKIGPENPYNTPVF 61
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.137 0.401
Gapped
Lambda K H
0.267 0.0438 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,808,227
Number of extensions: 87647
Number of successful extensions: 386
Number of sequences better than 10.0: 1
Number of HSP's gapped: 371
Number of HSP's successfully gapped: 31
Length of query: 483
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 394
Effective length of database: 1,185,626
Effective search space: 467136644
Effective search space used: 467136644
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.7 bits)