BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011570
(483 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/426 (69%), Positives = 363/426 (85%), Gaps = 4/426 (0%)
Query: 11 LLSKIAAGNGHGEDSPYFDGWKAFESDPYHPTKNPNGVIQMGLAENLLCHELVEDWLMNN 70
+LSK+A HGE+SPYFDGWKA++SDP+HP KNPNGVIQMGLAEN LC +L+EDW+ N
Sbjct: 1 ILSKLATNEEHGENSPYFDGWKAYDSDPFHPLKNPNGVIQMGLAENQLCLDLIEDWIKRN 60
Query: 71 PKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATG 130
PK SICS EG+ FK IA FQDYHGLPEFR A+AKFM K RG R+ FDP+R+VM+GGATG
Sbjct: 61 PKGSICS-EGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATG 119
Query: 131 AHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAY 190
A+ET+ FCLADPGDAFLVP+PYYP F+RDLRWRTGVQL+P+ C+SSN+FK+T +A++ AY
Sbjct: 120 ANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAY 179
Query: 191 EKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKES 250
E AQ+SNI++KG+++TNPSNPLGT LD++TLK ++SF N+ NIHLVCDEIYAATVF
Sbjct: 180 ENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVF-DTP 238
Query: 251 SFVSIAEIIDQD--IACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFG 308
FVSIAEI+D+ CN++L+HIVYSLSKDMG PGFRVGIIYS+ND VV+CARKMSSFG
Sbjct: 239 QFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFG 298
Query: 309 LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWM 368
LVS+QTQ+ +A MLSD++FV+ F+ ESA R+ +RHK FT GL VGI CLK+NAGLF WM
Sbjct: 299 LVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWM 358
Query: 369 DLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALS 428
DL LL+E T+++EM+LWRVIIN+VKLNVSPGSSF C PGWFRVCFANMDD T++IAL+
Sbjct: 359 DLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALA 418
Query: 429 RITSFM 434
RI F+
Sbjct: 419 RIRRFV 424
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 535 bits (1379), Expect = e-152, Method: Compositional matrix adjust.
Identities = 239/431 (55%), Positives = 325/431 (75%), Gaps = 7/431 (1%)
Query: 9 VQLLSKIAAGNGHGEDSPYFDGWKAFESDPYHPTKNPNGVIQMGLAENLLCHELVEDWLM 68
+++LS+ A N HG+DS YF GW+ +E +PYH N NG+IQMGLAEN LC +L+E WL
Sbjct: 1 MRMLSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLA 60
Query: 69 NNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGA 128
NP+A+ G + F +A+FQDYHGLP F+ A+ FM ++RGN++TFDP+ +V++ GA
Sbjct: 61 KNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 120
Query: 129 TGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEA 188
T A+ET FCLADPG+A L+PTPYYPGFDRDL+WRTGV++VP+ C SSN F++T ALE
Sbjct: 121 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEE 180
Query: 189 AYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTK 248
AY++A++ N+R+KGVL+TNPSNPLGT + R L ++SF+ +K IHL+ DEIY+ T F+
Sbjct: 181 AYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSS 240
Query: 249 ESSFVSIAEIIDQDIACNRN-----LIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK 303
SF+S+ E++ +D C+ N +H+VYSLSKD+G PGFRVG IYS +D VV+ A K
Sbjct: 241 -PSFISVMEVL-KDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK 298
Query: 304 MSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAG 363
MSSFGLVSSQTQHL++ MLSD + + +IAE+ KR+ +R K GL + GI CL NAG
Sbjct: 299 MSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAG 358
Query: 364 LFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTM 423
LF W+D+ HLL+ T+EAEM LW+ I+ EV LN+SPGSS HC PGWFRVCFAN+ +RT+
Sbjct: 359 LFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTL 418
Query: 424 EIALSRITSFM 434
++A+ R+ +F+
Sbjct: 419 DLAMQRLKAFV 429
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 535 bits (1377), Expect = e-152, Method: Compositional matrix adjust.
Identities = 239/431 (55%), Positives = 325/431 (75%), Gaps = 7/431 (1%)
Query: 9 VQLLSKIAAGNGHGEDSPYFDGWKAFESDPYHPTKNPNGVIQMGLAENLLCHELVEDWLM 68
+++LS+ A N HG+DS YF GW+ +E +PYH N NG+IQMGLAEN LC +L+E WL
Sbjct: 1 MRMLSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLA 60
Query: 69 NNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGA 128
NP+A+ G + F +A+FQDYHGLP F+ A+ FM ++RGN++TFDP+ +V++ GA
Sbjct: 61 KNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 120
Query: 129 TGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEA 188
T A+ET FCLADPG+A L+PTPYYPGFDRDL+WRTGV++VP+ C SSN F++T ALE
Sbjct: 121 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEE 180
Query: 189 AYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTK 248
AY++A++ N+R+KGVL+TNPSNPLGT + R L ++SF+ +K IHL+ DEIY+ T F+
Sbjct: 181 AYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSS 240
Query: 249 ESSFVSIAEIIDQDIACNRN-----LIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK 303
SF+S+ E++ +D C+ N +H+VYSLSKD+G PGFRVG IYS +D VV+ A K
Sbjct: 241 -PSFISVMEVL-KDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK 298
Query: 304 MSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAG 363
MSSFGLVSSQTQHL++ MLSD + + +IAE+ KR+ +R K GL + GI CL NAG
Sbjct: 299 MSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAG 358
Query: 364 LFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTM 423
LF W+D+ HLL+ T+EAEM LW+ I+ EV LN+SPGSS HC PGWFRVCFAN+ +RT+
Sbjct: 359 LFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTL 418
Query: 424 EIALSRITSFM 434
++A+ R+ +F+
Sbjct: 419 DLAMQRLKAFV 429
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 534 bits (1376), Expect = e-152, Method: Compositional matrix adjust.
Identities = 239/429 (55%), Positives = 323/429 (75%), Gaps = 7/429 (1%)
Query: 11 LLSKIAAGNGHGEDSPYFDGWKAFESDPYHPTKNPNGVIQMGLAENLLCHELVEDWLMNN 70
+LS+ A N HG+DS YF GW+ +E +PYH N NG+IQMGLAEN LC +L+E WL N
Sbjct: 1 MLSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKN 60
Query: 71 PKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATG 130
P+A+ G + F +A+FQDYHGLP F+ A+ FM ++RGN++TFDP+ +V++ GAT
Sbjct: 61 PEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATS 120
Query: 131 AHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAY 190
A+ET FCLADPG+A L+PTPYYPGFDRDL+WRTGV++VP+ C SSN F++T ALE AY
Sbjct: 121 ANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAY 180
Query: 191 EKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKES 250
++A++ N+R+KGVL+TNPSNPLGT + R L ++SF+ +K IHL+ DEIY+ T F+
Sbjct: 181 QEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSS-P 239
Query: 251 SFVSIAEIIDQDIACNRN-----LIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS 305
SF+S+ E++ +D C+ N +H+VYSLSKD+G PGFRVG IYS +D VV+ A KMS
Sbjct: 240 SFISVMEVL-KDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS 298
Query: 306 SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLF 365
SFGLVSSQTQHL++ MLSD + + +IAE+ KR+ +R K GL + GI CL NAGLF
Sbjct: 299 SFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLF 358
Query: 366 LWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEI 425
W+D+ HLL+ T+EAEM LW+ I+ EV LN+SPGSS HC PGWFRVCFAN+ +RT+++
Sbjct: 359 CWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDL 418
Query: 426 ALSRITSFM 434
A+ R+ +F+
Sbjct: 419 AMQRLKAFV 427
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 512 bits (1319), Expect = e-145, Method: Compositional matrix adjust.
Identities = 228/409 (55%), Positives = 309/409 (75%), Gaps = 5/409 (1%)
Query: 27 YFDGWKAFESDPYHPTKNPNGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKG 86
YF GW+ +E +PYH N NG+IQMGLAEN LC +L+E WL NP+A+ G + F
Sbjct: 2 YFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAE 61
Query: 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAF 146
+A+FQDYHGLP F+ A+ FM ++RGN++TFDP+ +V++ GAT A+ET FCLADPG+A
Sbjct: 62 LALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAV 121
Query: 147 LVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLIT 206
L+PTPYYPGFDRDL+WRTGV++VP+ C SSN F++T ALE AY++A++ N+R+KGVL+T
Sbjct: 122 LIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVT 181
Query: 207 NPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACN 266
NPSNPLGT + R L ++SF+ +K IHL+ DEIY+ T F+ SF+S+ E++ ++
Sbjct: 182 NPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSS-PSFISVMEVLKDEV--- 237
Query: 267 RNLIHIVYSLS-KDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDD 325
+H+VYSLS KD+G PGFRVG IYS +D VV+ A KMSSFGLVSSQTQHL++ MLSD
Sbjct: 238 WQRVHVVYSLSXKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDK 297
Query: 326 QFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMAL 385
+ + +IAE+ KR+ +R K GL + GI CL NAGLF W+D+ HLL+ T+EAEM L
Sbjct: 298 KLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMEL 357
Query: 386 WRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434
W+ I+ EV LN+SPGSS HC PGWFRVCFAN+ +RT+++A+ R+ +F+
Sbjct: 358 WKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFV 406
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 164/354 (46%), Gaps = 40/354 (11%)
Query: 85 KGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGD 144
KG + D G+ E R +AK +G+ I+ PD++V++ GA A L DPGD
Sbjct: 69 KGEVKYTDPRGIYELREGIAKRIGERYKKDIS--PDQVVVTNGAKQALFNAFMALLDPGD 126
Query: 145 AFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204
+V +P + + + G V V S +F+ ++E +E + K VL
Sbjct: 127 EVIVFSPVWVSYIPQIILAGGTVNV-VETFMSKNFQPSLEEVEGLLVG------KTKAVL 179
Query: 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE-SSFVSIAEIIDQDI 263
I +P+NP G RE L+ +V ++N +++ DE+Y + V+T E +S + ++E D+ +
Sbjct: 180 INSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIV 239
Query: 264 ACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATM 321
N SK G+RVG + S +++V + K+ S +++ Q+
Sbjct: 240 YIN--------GFSKSHSMTGWRVGYLIS-SEKVATAVSKIQSHTTSCINTVAQYAALKA 290
Query: 322 LS-DDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYE 380
L D+ ++ + E + ER L ++G+ ++ +L+ +
Sbjct: 291 LEVDNSYMVQTFKERKNFVVER-------LKKMGVKFVEPEGAFYLFFKVRG-------- 335
Query: 381 AEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434
++ ++ E K+ + PGS+F PG+ R+ FA +R E AL RI F+
Sbjct: 336 DDVKFCERLLEEKKVALVPGSAFL--KPGFVRLSFATSIERLTE-ALDRIEDFL 386
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 156/365 (42%), Gaps = 30/365 (8%)
Query: 91 QDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPT 150
Q HGL R+A+A + G D D + G + G H + + + D LVP
Sbjct: 134 QGIHGL---RDAIASGIASRDGFPANAD-DIFLTDGASPGVHLMMQLLIRNEKDGILVPI 189
Query: 151 PYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSN 210
P YP + + G LVP + S + + ++ E A+ I ++ +++ NP N
Sbjct: 190 PQYPLYSASIALHGGA-LVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGN 248
Query: 211 PLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLI 270
P G L E DIV F + + L+ DE+Y ++ F S +I+ +L
Sbjct: 249 PTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLP 308
Query: 271 HIVY-SLSKD-MGFPGFRVGI--IYSYNDQVVSCARKMSSFGLVSSQTQHLIATML---- 322
+ Y S+SK G G R G I ++ V K++S L S+ T ++A+++
Sbjct: 309 LVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPP 368
Query: 323 -SDDQFVEKFIAES---AKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLHHLLKEQ 377
+ D+ + AE +A R KA +++ GI C ++ ++++ + L ++
Sbjct: 369 KASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQI--CLPQK 426
Query: 378 TYEAEMALWRV--------IINEVKLNVSPGSSF-HCPNPGWFRVCFANMDDRTMEIALS 428
EA A + ++ + V PGS F P FR +D+ + +S
Sbjct: 427 AIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAV-IS 485
Query: 429 RITSF 433
R T F
Sbjct: 486 RFTVF 490
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 160/372 (43%), Gaps = 45/372 (12%)
Query: 68 MNNPKASICSAEGLNEFK-GIAIFQDYHGLPEFRNAVAK-FMGKVRGNRITFDPDRIVMS 125
N PK + EG+ K G + D G+ E R +++ + K + + I PD I+++
Sbjct: 41 FNTPKPIV--DEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADII---PDNIIIT 95
Query: 126 GGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEA 185
GG++ + D GD L+ P YP + +R+ G + PV CD T+E+
Sbjct: 96 GGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRF-LGAK--PVFCD------FTVES 146
Query: 186 LEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV 245
LE A + K ++I +PSNPLG +DRE I F E +++ DEIY V
Sbjct: 147 LEEALSD------KTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLV 196
Query: 246 FT-KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM 304
+ K S + E +++ I N S G+R+G + S ND+++ K+
Sbjct: 197 YEGKCYSAIEFDENLEKTILIN--------GFSXLYAMTGWRIGYVIS-NDEIIEAILKL 247
Query: 305 SSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGL 364
+S+ T A + + ++ E+ I K R + + G
Sbjct: 248 QQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAY 307
Query: 365 FLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTME 424
+++ ++ +E Y+ ++ E + ++PG F + R+ +AN + E
Sbjct: 308 YVFPNIGEDGREFAYK--------LLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKE 359
Query: 425 IALSRITSFMLK 436
L RI F+ K
Sbjct: 360 -GLERIKEFLNK 370
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 163/381 (42%), Gaps = 58/381 (15%)
Query: 72 KASICSA--EGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGAT 129
K + C A EG N + D GLPE R A+ + + R N + PD + ++ T
Sbjct: 60 KEAYCKAIKEGHN------YYGDSEGLPELRKAIVE--REKRKNGVDITPDDVRVTAAVT 111
Query: 130 GAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAA 189
A + + L DPGD LVP P YP + +++ G + V D++ ++ +
Sbjct: 112 EALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGG-KPVEYRTIEEEDWQPDIDDIR-- 168
Query: 190 YEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE 249
++ R K + + NP+NP G D++TL++I++ E I ++ DEIY + T E
Sbjct: 169 ----KKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIY--DLMTYE 222
Query: 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYN-----DQVVSCARKM 304
+S + +D+ + ++ LSK G+R+G +Y + +V ++
Sbjct: 223 GEHISPGSLT-KDVP-----VIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRL 276
Query: 305 SSFGLVSSQTQHL--IATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSN 361
+ L + IA + ++++++ K++ ER L+++ GI K
Sbjct: 277 ARIRLCPNTPAQFAAIAGLTGPMDYLKEYM----KKLKERRDYIYKRLNEIPGISTTKPQ 332
Query: 362 AGLFLWMDLHHLLKEQTYEAEMALWR--------VIINEVKLNVSPGSSFHCPNPGWFRV 413
+++ + E+ W+ V+ N L V GS F G FR
Sbjct: 333 GAFYIFPKI-----------EVGPWKNDKEFVLDVLHNAHVLFVH-GSGFGEYGAGHFRA 380
Query: 414 CFANMDDRTMEIALSRITSFM 434
F + +E A+ R FM
Sbjct: 381 VFLPPIE-ILEEAMDRFEKFM 400
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 25/273 (9%)
Query: 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYP 154
G+ E R A A + R R+ P+ ++++ G + A +A+PGD LV P+Y
Sbjct: 80 GIWELREAFASYYK--RRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYA 137
Query: 155 GFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGT 214
++ + GV+L+PV F + + LE+ N R KG++++NP NP G
Sbjct: 138 NYNAFAKI-AGVKLIPVTRRXEEGFAIP-QNLESFI------NERTKGIVLSNPCNPTGV 189
Query: 215 FLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVY 274
++ + +V + L+ DE+Y+ VF E F S I + ++
Sbjct: 190 VYGKDEXRYLVEIAERHGLFLIVDEVYSEIVFRGE--FASALSIESDKVV-------VID 240
Query: 275 SLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHL--IATMLSDDQFVEKFI 332
S+S G RVG + + N++++S A K++ L + + + + DD F + F+
Sbjct: 241 SVSXKFSACGARVGCLITRNEELISHAXKLAQGRLAPPLLEQIGSVGLLNLDDSFFD-FV 299
Query: 333 AESAKRIAERHKAFTWGLSQVGIGCLKSNAGLF 365
E+ + ER + L + G+ +G F
Sbjct: 300 RETYR---ERVETVLKKLEEHGLKRFTKPSGAF 329
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 144/343 (41%), Gaps = 32/343 (9%)
Query: 95 GLPEFRNAVA-KFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYY 153
G+PE R A+A KF R N ++ P+ +++ G + A + + DPGD +V +PY+
Sbjct: 69 GIPELREALAEKFR---RENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYW 125
Query: 154 PGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLG 213
+ +R+ GV +V V F E + A R K +++ +P+NP G
Sbjct: 126 VSYPEMVRFAGGV-VVEVETLPEEGFVPDPERVRRAI------TPRTKALVVNSPNNPTG 178
Query: 214 TFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIV 273
+E L+ + E + +LV DEIY ++ E +A L V
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGE-------HFSPGRVAPEHTL--TV 229
Query: 274 YSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATM--LSDDQFVEKF 331
+K G+R+G +V+ +SS S T AT+ L++ + F
Sbjct: 230 NGAAKAFAMTGWRIGYACG-PKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAF 288
Query: 332 IAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIIN 391
+ + + R GL+ +G+ ++ + ++ MD + ++ AE L
Sbjct: 289 VEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL------ 342
Query: 392 EVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434
E + V PG+ F G R+ +A ++ + AL R +
Sbjct: 343 EAGVAVVPGTDFAA--FGHVRLSYATSEE-NLRKALERFARVL 382
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 143/343 (41%), Gaps = 32/343 (9%)
Query: 95 GLPEFRNAVA-KFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYY 153
G+PE R A+A KF R N ++ P+ +++ G A + + DPGD +V +PY+
Sbjct: 69 GIPELREALAEKFR---RENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYW 125
Query: 154 PGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLG 213
+ +R+ GV +V V F E + A R K +++ +P+NP G
Sbjct: 126 VSYPEMVRFAGGV-VVEVETLPEEGFVPDPERVRRAI------TPRTKALVVNSPNNPTG 178
Query: 214 TFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIV 273
+E L+ + E + +LV DEIY ++ E +A L V
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGE-------HFSPGRVAPEHTL--TV 229
Query: 274 YSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATM--LSDDQFVEKF 331
+K G+R+G +V+ +SS S T AT+ L++ + F
Sbjct: 230 NGAAKAFAMTGWRIGYACG-PKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAF 288
Query: 332 IAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIIN 391
+ + + R GL+ +G+ ++ + ++ MD + ++ AE L
Sbjct: 289 VEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL------ 342
Query: 392 EVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434
E + V PG+ F G R+ +A ++ + AL R +
Sbjct: 343 EAGVAVVPGTDFAA--FGHVRLSYATSEE-NLRKALERFARVL 382
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 162/381 (42%), Gaps = 58/381 (15%)
Query: 57 LLCHELVEDWLMNNPKASICSAEGLNE--------FKGIAI--FQDYHGLPEFRNAVAKF 106
++ E V D+ + NP SI + + +N+ + +A+ + G E R A+A+F
Sbjct: 31 IVGKENVYDFSIGNP--SIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEF 88
Query: 107 MGKVRGNRITFDPDRIVMSGGATGAHETVAFCL----ADPGDAFLVPTPYYPGFDRDLRW 162
+ G F+ D + + GA +++ C +D D F+ PY+P + +
Sbjct: 89 LNNTHGTH--FNADNLYXTXGAAA---SLSICFRALTSDAYDEFITIAPYFPEY-KVFVN 142
Query: 163 RTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLK 222
G +LV V D+ + F++ +ALE + N +GV+I +P+NP GT ET+K
Sbjct: 143 AAGARLVEVPADTEH-FQIDFDALE------ERINAHTRGVIINSPNNPSGTVYSEETIK 195
Query: 223 DIVSFINEKN------IHLVCDEIYAATVFTK-ESSFVSIAEIIDQDIACNRNLIHIVYS 275
+ + +K+ I ++ DE Y V+ + FV+ + D + C YS
Sbjct: 196 KLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVT--KYYDNTLVC--------YS 245
Query: 276 LSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAES 335
SK + PG R+G + D+V A ++ ++ A L V+ A
Sbjct: 246 YSKSLSLPGERIGYVLV-PDEVYDKAELYAAVCGAGRALGYVCAPSLFQKXIVKCQGATG 304
Query: 336 AKRIAERHKAFTW-GLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVK 394
+ ++ + GL+++G C K + + ++ + E + + E
Sbjct: 305 DINAYKENRDLLYEGLTRIGYHCFKPDGAFYXFV--------KALEDDSNAFCEKAKEED 356
Query: 395 LNVSPGSSFHCPNPGWFRVCF 415
+ + F C PGW R+ +
Sbjct: 357 VLIVAADGFGC--PGWVRISY 375
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 143/343 (41%), Gaps = 32/343 (9%)
Query: 95 GLPEFRNAVA-KFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYY 153
G+PE R A+A KF R N ++ P+ +++ G + A + + DPGD +V +PY+
Sbjct: 69 GIPELREALAEKFR---RENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYW 125
Query: 154 PGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLG 213
+ +R+ GV +V V F E + A R K +++ +P+NP G
Sbjct: 126 VSYPEMVRFAGGV-VVEVETLPEEGFVPDPERVRRAI------TPRTKALVVNSPNNPTG 178
Query: 214 TFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIV 273
+E L+ + E + +LV DEIY ++ E +A L V
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGE-------HFSPGRVAPEHTL--TV 229
Query: 274 YSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATM--LSDDQFVEKF 331
+K G+R+G +V+ +S S T AT+ L++ + F
Sbjct: 230 NGAAKAFAMTGWRIGYACG-PKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAF 288
Query: 332 IAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIIN 391
+ + + R GL+ +G+ ++ + ++ MD + ++ AE L
Sbjct: 289 VEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL------ 342
Query: 392 EVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434
E + V PG+ F G R+ +A ++ + AL R +
Sbjct: 343 EAGVAVVPGTDFAA--FGHVRLSYATSEE-NLRKALERFARVL 382
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 143/343 (41%), Gaps = 32/343 (9%)
Query: 95 GLPEFRNAVA-KFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYY 153
G+PE R A+A KF R N ++ P+ +++ G + A + + DPGD +V +PY+
Sbjct: 69 GIPELREALAEKFR---RENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYW 125
Query: 154 PGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLG 213
+ +R+ GV +V V F E + A R K +++ +P+NP G
Sbjct: 126 VSYPEMVRFAGGV-VVEVETLPEEGFVPDPERVRRAI------TPRTKALVVNSPNNPTG 178
Query: 214 TFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIV 273
+E L+ + E + +LV DEIY ++ E +A L V
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGE-------HFSPGRVAPEHTL--TV 229
Query: 274 YSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATM--LSDDQFVEKF 331
+K G+R+G +V+ +S S T AT+ L++ + F
Sbjct: 230 NGAAKAFAMTGWRIGYACG-PKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAF 288
Query: 332 IAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIIN 391
+ + + R GL+ +G+ ++ + ++ MD + ++ AE L
Sbjct: 289 VEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL------ 342
Query: 392 EVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434
E + V PG+ F G R+ +A ++ + AL R +
Sbjct: 343 EAGVAVVPGTDFAA--FGHVRLSYATSEE-NLRKALERFARVL 382
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 143/343 (41%), Gaps = 32/343 (9%)
Query: 95 GLPEFRNAVA-KFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYY 153
G+PE R A+A KF R N ++ P+ +++ G + A + + DPGD +V +PY+
Sbjct: 69 GIPELREALAEKFR---RENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYW 125
Query: 154 PGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLG 213
+ +R+ GV +V V F E + A R K +++ +P+NP G
Sbjct: 126 VSYPEMVRFAGGV-VVEVETLPEEGFVPDPERVRRAI------TPRTKALVVNSPNNPTG 178
Query: 214 TFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIV 273
+E L+ + E + +LV DEIY ++ E +A L V
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGE-------HFSPGRVAPEHTL--TV 229
Query: 274 YSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATM--LSDDQFVEKF 331
+K G+R+G +V+ +S S T AT+ L++ + F
Sbjct: 230 NGAAKAFAMTGWRIGYACG-PKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAF 288
Query: 332 IAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIIN 391
+ + + R GL+ +G+ ++ + ++ MD + ++ AE L
Sbjct: 289 VEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL------ 342
Query: 392 EVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434
E + V PG+ F G R+ +A ++ + AL R +
Sbjct: 343 EAGVAVVPGTDFAA--FGHVRLSYATSEE-NLRKALERFARVL 382
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 142/343 (41%), Gaps = 32/343 (9%)
Query: 95 GLPEFRNAVA-KFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYY 153
G+PE R A+A KF R N ++ P+ +++ G A + + DPGD +V +PY+
Sbjct: 69 GIPELREALAEKFR---RENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYW 125
Query: 154 PGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLG 213
+ +R+ GV +V V F E + A R K +++ +P+NP G
Sbjct: 126 VSYPEMVRFAGGV-VVEVETLPEEGFVPDPERVRRAI------TPRTKALVVNSPNNPTG 178
Query: 214 TFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIV 273
+E L+ + E + +LV DEIY ++ E +A L V
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGE-------HFSPGRVAPEHTL--TV 229
Query: 274 YSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATM--LSDDQFVEKF 331
+ G+R+G +V+ +SS S T AT+ L++ + F
Sbjct: 230 NGAAXAFAMTGWRIGYACG-PKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAF 288
Query: 332 IAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIIN 391
+ + + R GL+ +G+ ++ + ++ MD + ++ AE L
Sbjct: 289 VEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL------ 342
Query: 392 EVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434
E + V PG+ F G R+ +A ++ + AL R +
Sbjct: 343 EAGVAVVPGTDFAA--FGHVRLSYATSEE-NLRKALERFARVL 382
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 158/359 (44%), Gaps = 38/359 (10%)
Query: 85 KGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIVMSGGATGAHETVAFCLADPG 143
KG+ + GL E R A+A+ + K G I DP I++ GA A G
Sbjct: 53 KGLTHYGPNIGLLELREAIAEKLKKQNG--IEADPKTEIMVLLGANQAFLMGLSAFLKDG 110
Query: 144 DAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203
+ L+PTP + + + G + V V ++F++ ++ L+ + + + +
Sbjct: 111 EEVLIPTPAFVSYAPAVIL-AGGKPVEVPTYEEDEFRLNVDELK------KYVTDKTRAL 163
Query: 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVF--TKESSFVSIAEIIDQ 261
+I +P NP G L ++ L++I F+ E ++ ++ DE+Y ++ + S S+ + ++
Sbjct: 164 IINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFER 223
Query: 262 DIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQ-----TQH 316
I N SK G+R+G + + + +M F + ++ Q+
Sbjct: 224 TITVN--------GFSKTFAMTGWRLGFVAAPS----WIIERMVKFQMYNATCPVTFIQY 271
Query: 317 LIATMLSDDQFVEKFIAESAKRIAERHKAFTWG-LSQVGIGCLKSNAGLFLWMDLHHLLK 375
A L D++ + E ++ +R + W L+++G+ +K +++ +
Sbjct: 272 AAAKALKDERSWKA--VEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIR---- 325
Query: 376 EQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434
T +++ E ++ V PGS+F G+ R+ +A ++ +E A+ R+ +
Sbjct: 326 -DTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEK-LEEAMERMERVL 382
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 158/359 (44%), Gaps = 38/359 (10%)
Query: 85 KGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIVMSGGATGAHETVAFCLADPG 143
KG+ + GL E R A+A+ + K G I DP I++ GA A G
Sbjct: 54 KGLTHYGPNIGLLELREAIAEKLKKQNG--IEADPKTEIMVLLGANQAFLMGLSAFLKDG 111
Query: 144 DAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203
+ L+PTP + + + G + V V ++F++ ++ L+ + + + +
Sbjct: 112 EEVLIPTPAFVSYAPAVIL-AGGKPVEVPTYEEDEFRLNVDELK------KYVTDKTRAL 164
Query: 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVF--TKESSFVSIAEIIDQ 261
+I +P NP G L ++ L++I F+ E ++ ++ DE+Y ++ + S S+ + ++
Sbjct: 165 IINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFER 224
Query: 262 DIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQ-----TQH 316
I N SK G+R+G + + + +M F + ++ Q+
Sbjct: 225 TITVN--------GFSKTFAMTGWRLGFVAAPS----WIIERMVKFQMYNATCPVTFIQY 272
Query: 317 LIATMLSDDQFVEKFIAESAKRIAERHKAFTWG-LSQVGIGCLKSNAGLFLWMDLHHLLK 375
A L D++ + E ++ +R + W L+++G+ +K +++ +
Sbjct: 273 AAAKALKDERSWKA--VEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIR---- 326
Query: 376 EQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434
T +++ E ++ V PGS+F G+ R+ +A ++ +E A+ R+ +
Sbjct: 327 -DTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEK-LEEAMDRMERVL 383
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 140/350 (40%), Gaps = 43/350 (12%)
Query: 93 YHGLPEFRNAVAKFMGKVRGNRITFDP-DRIVMSGGATGAHETVAFCLADPGDAFLVPTP 151
+HG F+ A+ F R +T D D + + G V C+ +PGD L+P P
Sbjct: 84 FHGKEAFKQAIVDFY--QRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDP 141
Query: 152 YYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI------RIKGVLI 205
Y + GV L D K LE + S + + K + +
Sbjct: 142 GY------TDYLAGVLLA--------DGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYL 187
Query: 206 TNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIAC 265
T P+NP G+ +E + ++ + +V D Y A F ++ + +A +D+A
Sbjct: 188 TYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSI-LASENGKDVAI 246
Query: 266 NRNLIHIVYSLSKDMGFPGFRVGIIYSYND--QVVSCARKMSSFGLVSSQTQHLIATMLS 323
+YSLSK GFRVG D Q + + ++ G + I +
Sbjct: 247 E------IYSLSKGYNXSGFRVGFAVGNKDXIQALKKYQTHTNAGXFGALQDAAIYALNH 300
Query: 324 DDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEM 383
D F+E E + R F L++ + + + G+++W++ + +E
Sbjct: 301 YDDFLE----EQSNVFKTRRDRFEAXLAKADLPFVHAKGGIYVWLETPPGYDSEQFE--- 353
Query: 384 ALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433
+ ++ E + V+PG F + R+ A +DD+ ++ A R+T
Sbjct: 354 ---QFLVQEKSILVAPGKPFGENGNRYVRISLA-LDDQKLDEAAIRLTEL 399
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 28/253 (11%)
Query: 94 HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYY 153
G P F+ +V++ V+ P++I+ + GATGA+ V + L +PGD + P Y
Sbjct: 63 EGSPAFKKSVSQLYTGVK-------PEQILQTNGATGANLLVLYSLIEPGDHVISLYPTY 115
Query: 154 PGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLG 213
D+ G ++ + N + +E L Q K + I N +NP G
Sbjct: 116 QQL-YDIPKSLGAEVDLWQIEEENGWLPDLEKLR------QLIRPTTKXICINNANNPTG 168
Query: 214 TFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIV 273
DR L+++V +E +++ DE+Y + E SI E+ D+ IA N
Sbjct: 169 AVXDRTYLEELVEIASEVGAYILSDEVYRS---FSELDVPSIIEVYDKGIAVN------- 218
Query: 274 YSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIA 333
SLS PG R+G + + N QV R + + + + L+ + E I
Sbjct: 219 -SLSXTYSLPGIRIGWV-AANHQVTDILRDYRDYTXICAGVFDDLVAQLALAHYQE--IL 274
Query: 334 ESAKRIAERHKAF 346
E + I E + A
Sbjct: 275 ERNRHILEENLAI 287
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 177/426 (41%), Gaps = 67/426 (15%)
Query: 36 SDPYHPTKNPNGVIQMGLAENLLCHELVEDWL-MNNPKASICSAEGLNEFKGIAIFQDYH 94
SD P+ +P +I++ + + L L+ + K +I S E F +
Sbjct: 23 SDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTV------- 75
Query: 95 GLPEFRNAVA-----KFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVP 149
G PE R AVA F+ K + ++ SGG+ G + + D GD LVP
Sbjct: 76 GSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAIT-AICDAGDYALVP 134
Query: 150 TPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPS 209
P +P ++ + G+ + C ND++ ++ E + + + K +++TNPS
Sbjct: 135 QPGFPHYETVCK-AYGIGMHFYNCRPENDWEADLD------EIRRLKDDKTKLLIVTNPS 187
Query: 210 NPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNL 269
NP G+ R+ ++DIV E + L DEIYA VF + + + D + R
Sbjct: 188 NPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRV- 246
Query: 270 IHIVYSLSKDMGFPGFRVGIIYSYNDQ-----------------VVSCARKMSSFG--LV 310
I+ + ++ PG+R+G + + C ++ G L+
Sbjct: 247 --ILGGTAXNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALL 304
Query: 311 SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDL 370
++ +HL DQ V K I ESA + + +G+ ++L M
Sbjct: 305 NTPQEHL-------DQIVAK-IEESAMYL------YNHIGECIGLAPTMPRGAMYL-MSR 349
Query: 371 HHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEI---AL 427
L K + + ++ + ++ E + V PG+ FH PG+ R+ R +E+ A+
Sbjct: 350 IDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHA--PGFTRLTTT----RPVEVYREAV 403
Query: 428 SRITSF 433
RI +F
Sbjct: 404 ERIKAF 409
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYP 154
GLP R +A+ G+ G + DP R+V++ G++G L D GD + P YP
Sbjct: 69 GLPALRQRIARLYGEWYG--VDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYP 126
Query: 155 GFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGT 214
+ + LR + LVPV ++ + + ++ + A + + + + G+ + +P+NP GT
Sbjct: 127 SYRQILR---ALGLVPVDLPTAPENR--LQPVPADF-----AGLDLAGLXVASPANPTGT 176
Query: 215 FLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVY 274
LD ++ + + DEIY + E+ V+ E+ D+ C +++
Sbjct: 177 XLDHAAXGALIEAAQAQGASFISDEIYHGIEY--EAKAVTALELTDE---C-----YVIN 226
Query: 275 SLSKDMGFPGFRVGIIYSYNDQVVSCAR 302
S SK G+RVG DQV R
Sbjct: 227 SFSKYFSXTGWRVGWXVVPEDQVRVVER 254
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 137/344 (39%), Gaps = 49/344 (14%)
Query: 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYP 154
GLP R A+A+ +P+ +V++ GAT A + L PGD +V P++
Sbjct: 62 GLPALREALAE--------EFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFD 113
Query: 155 GFDRDLRWRTGVQLVPVVCD-SSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLG 213
+ D + G + V D + F++ + ALE A R + +L+ P NP G
Sbjct: 114 VYLPDA-FLAGAKARLVRLDLTPEGFRLDLSALEKAL------TPRTRALLLNTPMNPTG 166
Query: 214 TFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIV 273
L+ I ++ L+ DE+Y + + + ++ A R V
Sbjct: 167 LVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRL-------REFAPERTF--TV 217
Query: 274 YSLSKDMGFPGFRVGIIYSYNDQVVSCA--RKMSSFGLVSS-QTQHLIATMLSDDQFVEK 330
S K + G+RVG I + + A R+ +SF + Q A L+ + +
Sbjct: 218 GSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYE 277
Query: 331 FIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRV-- 388
+ E +R R GL +G+ FL AE+ W
Sbjct: 278 ALREGYRR---RRDLLAGGLRAMGLRVYVPEGTYFLM-------------AELPGWDAFR 321
Query: 389 IINEVKLNVSPGSSFHCPNP--GWFRVCFANMDDRTMEIALSRI 430
++ E ++ + P S+F+ +P FR F ++ + +AL R+
Sbjct: 322 LVEEARVALIPASAFYLEDPPKDLFRFAFCKTEE-ELHLALERL 364
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 163/376 (43%), Gaps = 44/376 (11%)
Query: 69 NNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGA 128
N PK + +A+ E +G + G P R A+A+ + R N + + D I+++ G
Sbjct: 43 NTPKHIVEAAKAALE-QGKTRYGPAAGEPRLREAIAQKLQ--RDNGLCYGADNILVTNGG 99
Query: 129 TGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSS--NDFKVTMEAL 186
+ + + +PGD ++P P++ + ++ G PV+ ++ FKV+ E +
Sbjct: 100 KQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEG---TPVILPTTVETQFKVSPEQI 156
Query: 187 EAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVF 246
Q + K ++ PSNP G + ++ I E + ++ DEIY ++
Sbjct: 157 R------QAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILY 210
Query: 247 TKESSFVSIA----EIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCAR 302
++ +SI E ++ + C+ +K G+RVG + + +V A
Sbjct: 211 -DDAQHLSIGAASPEAYERSVVCS--------GFAKTYAMTGWRVGFL-AGPVPLVKAAT 260
Query: 303 KM---SSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCL 358
K+ S+ + + IA + V++ +A AER + L+ + G+ C
Sbjct: 261 KIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAA----FAERRRYMLDALNAMPGLECP 316
Query: 359 KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANM 418
K + +++ + +T + + ++++ ++ PG++F + R+ +A
Sbjct: 317 KPDGAFYMFPSI-----AKTGRSSLDFCSELLDQHQVATVPGAAFGADD--CIRLSYAT- 368
Query: 419 DDRTMEIALSRITSFM 434
D T++ + R+ F+
Sbjct: 369 DLDTIKRGMERLEKFL 384
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 40/356 (11%)
Query: 61 ELVEDWLMNNPKA--------SICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRG 112
E + D M NP +C+ + G + G+P R A++ +
Sbjct: 37 EDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHG---YSTSRGIPRLRRAISHWYRDRYD 93
Query: 113 NRITFDPDRIVMSGGATG-AHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPV 171
+I + + IV G G AH +A D GD LVP P YP G Q+ V
Sbjct: 94 VQIDPESEAIVTIGSKEGLAHLMLATL--DHGDTILVPNPSYPIHIYGAVI-AGAQVRSV 150
Query: 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK 231
DF LE A +ES + + +++ PSNP ++ + + +V+ +
Sbjct: 151 PLVPGIDF---FNELERAI---RESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQY 204
Query: 232 NIHLVCDEIYAATVFT--KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGI 289
++ +V D YA V+ K S + + +DIA ++LSK G+R+G
Sbjct: 205 DVMVVHDLAYADIVYDGWKAPSIMQVPGA--KDIAVE------FFTLSKSYNMAGWRIGF 256
Query: 290 IYSYNDQVVSCARKMS--SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFT 347
+ + V + AR S +G + IA + D Q V A++ +R
Sbjct: 257 MVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDI----ARQYQQRRDVLV 312
Query: 348 WGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSF 403
GL + G A +++W + + + + + ++ + K++VSPG F
Sbjct: 313 KGLREAGWMVENPKASMYVWAKIP---EPYAHLGSLEFAKKLLQDAKVSVSPGIGF 365
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 10/208 (4%)
Query: 94 HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPG----DAFLVP 149
G+ R VA ++ + R + DPD I ++ GA+ T+ L G ++P
Sbjct: 129 QGVNCIREDVAAYITR-RDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIP 187
Query: 150 TPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPS 209
P YP + + +Q V D N + + + L A ++A++ + K + I NP
Sbjct: 188 IPQYPLYSAVISELDAIQ-VNYYLDEENCWALNVNELRRAVQEAKD-HCDPKVLCIINPG 245
Query: 210 NPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQ---DIACN 266
NP G R+ ++D++ F E+ + L+ DE+Y V++ + F S +++ + + + N
Sbjct: 246 NPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSN 305
Query: 267 RNLIHIVYSLSKDMGFPGFRVGIIYSYN 294
L + MG G+R G + N
Sbjct: 306 VELASFHSTSKGYMGECGYRGGYMEVIN 333
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 157/386 (40%), Gaps = 43/386 (11%)
Query: 71 PKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATG 130
P+ +I A+ + + + G P N++ K + + + + TG
Sbjct: 72 PQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTV-----TTG 126
Query: 131 AHETVAFCLA---DPGDAFLVPTPYYPGFDRDLRWRTG-VQLVPVVCDSSNDFKVTM-EA 185
A+E + CL + GD +V P++ + ++ G V VP+ D + T E
Sbjct: 127 ANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEE 186
Query: 186 LEAAYEKAQES-NIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT 244
+E+ +++ + K V+I P NP+G RE L + + + N+ ++ DE+Y
Sbjct: 187 WTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHL 246
Query: 245 VFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM 304
FT SF IA + +I L V S G+R+G + S N +++S A K
Sbjct: 247 YFT--DSFTRIA-TLSPEIG---QLTLTVGSAGXSFAATGWRIGWVLSLNAELLSYAAKA 300
Query: 305 SSFGLVSSQT--QHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNA 362
+ +S + Q A ++D + F + + + K FT ++G+
Sbjct: 301 HTRICFASPSPLQEACANSINDALKIGYF-EKMRQEYINKFKIFTSIFDELGLPYTAPEG 359
Query: 363 GLFLWMDLHHLLKEQTY-----------EAEMALWRVIINEVKLNVSPGSSFH------- 404
F+ +D + + Y + ++ W +INE+ + P + F+
Sbjct: 360 TYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHW--LINELGVVAIPPTEFYIKEHEKA 417
Query: 405 CPNPGWFRVCFANMDDRTMEIALSRI 430
N F VC DD +E A+ R+
Sbjct: 418 AENLLRFAVC---KDDAYLENAVERL 440
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 30/246 (12%)
Query: 113 NRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVV 172
++ +FD + IV G A G+A L+ +P YP F R +R + +
Sbjct: 83 HQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSL 142
Query: 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKN 232
+ + F++ E LE E+++++ L+ NP NP G +RE L+ I + +
Sbjct: 143 KEENGLFQIDFEQLE---NDIVENDVKL--YLLCNPHNPGGRVWEREVLEQIGHLCQKHH 197
Query: 233 IHLVCDEIYA-ATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFR--VGI 289
+ LV DEI+ T+F E + +D A ++ S +K G + I
Sbjct: 198 VILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFAL------VLSSATKTFNIAGTKNSYAI 251
Query: 290 IYS-------YNDQVVSCARKMSSFGLVSSQTQH---------LIATMLSDDQFVEKFIA 333
I + + Q+V+ ++SS G ++++T + L A + + QF ++ A
Sbjct: 252 IENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFA 311
Query: 334 ESAKRI 339
+ A R+
Sbjct: 312 QEAPRL 317
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 148/355 (41%), Gaps = 34/355 (9%)
Query: 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYP 154
G R + K++GK G I+ D D I+++ G+ A + + +PGD +V P Y
Sbjct: 119 GFTPLRETLMKWLGKRYG--ISQDND-IMITSGSQQALDLIGRVFLNPGDIVVVEAPTYL 175
Query: 155 GFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPS--NPL 212
+ + Q + + D D + +E LE ++ + ++K V+ T P+ NP
Sbjct: 176 AALQAFNFYEP-QYIQIPLD---DEGMKVEILEEKLKELKSQGKKVK-VVYTVPTFQNPA 230
Query: 213 GTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHI 272
G ++ + K ++ +E + +V D+ Y ++ ++ I N +
Sbjct: 231 GVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNP---------EKKIKALDNEGRV 281
Query: 273 VY--SLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEK 330
+Y + SK + PGFR+G + + S L ++ ++A D ++EK
Sbjct: 282 IYLGTFSKILA-PGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEK 340
Query: 331 FIAESAKRIAERHKAFTWGLSQV---GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWR 387
I E K R A L + G+ K G+F+W+ L + +++ L R
Sbjct: 341 HIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGI-----DSKKMLER 395
Query: 388 VIINEVKLNVSPGSSF--HCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNVEA 440
I V PG +F H R+ F +D+ + + R+ + + ++A
Sbjct: 396 AIKKGVAY--VPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELKA 448
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 148/356 (41%), Gaps = 34/356 (9%)
Query: 94 HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYY 153
G R + K++GK G I+ D D I+++ G+ A + + +PGD +V P Y
Sbjct: 73 KGFTPLRETLMKWLGKRYG--ISQDND-IMITSGSQQALDLIGRVFLNPGDIVVVEAPTY 129
Query: 154 PGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPS--NP 211
+ + Q + + D D + +E LE ++ + ++K V+ T P+ NP
Sbjct: 130 LAALQAFNFYEP-QYIQIPLD---DEGMKVEILEEKLKELKSQGKKVK-VVYTVPTFQNP 184
Query: 212 LGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIH 271
G ++ + K ++ +E + +V D+ Y ++ ++ I N
Sbjct: 185 AGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNP---------EKKIKALDNEGR 235
Query: 272 IVY--SLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVE 329
++Y + SK + PGFR+G + + S L ++ ++A D ++E
Sbjct: 236 VIYLGTFSKILA-PGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLE 294
Query: 330 KFIAESAKRIAERHKAFTWGLSQV---GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALW 386
K I E K R A L + G+ K G+F+W+ L + +++ L
Sbjct: 295 KHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGI-----DSKKMLE 349
Query: 387 RVIINEVKLNVSPGSSF--HCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNVEA 440
R I V PG +F H R+ F +D+ + + R+ + + ++A
Sbjct: 350 RAIKKGVAY--VPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELKA 403
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 139/355 (39%), Gaps = 38/355 (10%)
Query: 95 GLPEFRNAVAKFMGKVRGNRITFDPDR-IVMSGGATGAHETVAFCLADPGDAFLVPTPYY 153
G P +A F G++ G I DP R ++++ G GA T L D GD ++ P++
Sbjct: 68 GYPPLTKILASFFGELLGQEI--DPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFF 125
Query: 154 PGFDRDLRWRTG----VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPS 209
++ G V L P + + L+ E A + R K +++ P+
Sbjct: 126 DCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPM-ELAGKFTSRTKALVLNTPN 184
Query: 210 NPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNL 269
NPLG RE L+ + S + ++ + DE+Y V+ +SIA + R L
Sbjct: 185 NPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQH-ISIASLPGM---WERTL 240
Query: 270 IHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM--SSFGLVSSQTQHLIATMLSDDQF 327
+ S K G++VG + D ++ R + +S +Q+Q +A +Q
Sbjct: 241 --TIGSAGKTFSATGWKVGWVLG-PDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQL 297
Query: 328 V----EKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLK-------- 375
+ + + + + L VG+ L FL D+ +
Sbjct: 298 LFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPLIPQGSYFLITDISDFKRKMPDLPGA 357
Query: 376 -EQTYEAEMALWRVIINEVKLNVSPGSSFH-CPNPGWF----RVCFANMDDRTME 424
++ Y+ W +I L P S F+ P+ F R CF D+ T++
Sbjct: 358 VDEPYDRRFVKW--MIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK-DEATLQ 409
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 110/251 (43%), Gaps = 19/251 (7%)
Query: 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLV 148
++ +G+PE R +A F+ K + + P+ IV++ G TGA + + L DPGD +
Sbjct: 70 MYTPANGIPELREELAAFLKKY--DHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVIT 127
Query: 149 PTPYYPGFDRDLRW-RTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITN 207
P Y + L + + G ++ V D+ + ++ LE ++ + ++K ++ T
Sbjct: 128 ENPSY--INTLLAFEQLGAKIEGVPVDNDG---MRVDLLEEKIKELKAKGQKVK-LIYTI 181
Query: 208 PS--NPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIAC 265
P+ NP+G + E K ++ ++ ++ ++ D Y + +I+
Sbjct: 182 PTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEG-------GDIVPLKALD 234
Query: 266 NRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDD 325
N + + +LSK +G GFR+G I + + + + + IA
Sbjct: 235 NEGRVIVAGTLSKVLG-TGFRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKR 293
Query: 326 QFVEKFIAESA 336
+ EK+ E A
Sbjct: 294 GYFEKYHLEGA 304
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 138/355 (38%), Gaps = 38/355 (10%)
Query: 95 GLPEFRNAVAKFMGKVRGNRITFDPDR-IVMSGGATGAHETVAFCLADPGDAFLVPTPYY 153
G P +A F G++ G I DP R ++++ G GA T L D GD ++ P++
Sbjct: 68 GYPPLTKILASFFGELLGQEI--DPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFF 125
Query: 154 PGFDRDLRWRTG----VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPS 209
++ G V L P + + L+ E A + R K +++ P+
Sbjct: 126 DCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPM-ELAGKFTSRTKALVLNTPN 184
Query: 210 NPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNL 269
NPLG RE L+ + S + ++ + DE+Y V+ +SIA + R L
Sbjct: 185 NPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQH-ISIASLPGM---WERTL 240
Query: 270 IHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM--SSFGLVSSQTQHLIATMLSDDQF 327
+ S G++VG + D ++ R + +S +Q+Q +A +Q
Sbjct: 241 --TIGSAGXTFSATGWKVGWVLG-PDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQL 297
Query: 328 V----EKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLK-------- 375
+ + + + + L VG+ L FL D+ +
Sbjct: 298 LFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPLIPQGSYFLITDISDFKRKMPDLPGA 357
Query: 376 -EQTYEAEMALWRVIINEVKLNVSPGSSFH-CPNPGWF----RVCFANMDDRTME 424
++ Y+ W +I L P S F+ P+ F R CF D+ T++
Sbjct: 358 VDEPYDRRFVKW--MIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK-DEATLQ 409
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 149/363 (41%), Gaps = 52/363 (14%)
Query: 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYP 154
G P A++K ++ I + +V G + T+ + D GD ++ P++
Sbjct: 78 GHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHV-DEGDEVIIIEPFFD 136
Query: 155 GFDRDLRWRTGV-QLVPVVCD------SSNDFKVTMEALEAAYEKAQESNIRIKGVLITN 207
++ ++ G+ + +P+ + SS D+ + LEA + N + K ++I
Sbjct: 137 CYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALF------NEKTKMIIINT 190
Query: 208 PSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFT--KESSFVSIAEIIDQDIAC 265
P NPLG +DR L+ + + + N+ V DE+Y VF + ++ + ++ I
Sbjct: 191 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTIT- 249
Query: 266 NRNLIHIVYSLSKDMGFPGFRVGIIYS-----------YNDQVVSCARKMSSFGLVSSQT 314
+ S K G+++G Y + + V +CA + V +T
Sbjct: 250 -------IGSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFET 302
Query: 315 QHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFL---WMDLH 371
+ + + S + + F + S + +A+R ++ L++VG+ G F+ W L
Sbjct: 303 E--LKRLKSPECY---FNSISGELMAKRDYMASF-LAEVGMNPTVPQGGYFMVADWSSLD 356
Query: 372 H---LLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC-PNP----GWFRVCFANMDDRTM 423
L +E + + + V L P S+F+ PN + R CF D+
Sbjct: 357 SKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQ 416
Query: 424 EIA 426
+ A
Sbjct: 417 KAA 419
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Query: 95 GLPEFRNAVAKFMGKVRGNRITFDPDR-IVMSGGATGAHETVAFCLADPGDAFLVPTPYY 153
G P +A F G++ G I DP R ++++ G GA T L D GD ++ P++
Sbjct: 68 GYPPLTKILASFFGELLGQEI--DPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFF 125
Query: 154 PGFDRDLRWRTG----VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPS 209
++ G V L P + + L+ E A + R K +++ P+
Sbjct: 126 DCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPM-ELAGKFTSRTKALVLNTPN 184
Query: 210 NPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEI 258
NPLG RE L+ + S + ++ + DE+Y V+ +SIA +
Sbjct: 185 NPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQH-ISIASL 232
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 139/327 (42%), Gaps = 42/327 (12%)
Query: 122 IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKV 181
++++ G + A E LA+PG L+P P + + R L G+++ +++
Sbjct: 98 VILTSGCSQAIELCLAVLANPGQNILIPRPGFSLY-RTLAESMGIEVKLYNLLPEKSWEI 156
Query: 182 TMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIY 241
++ LE+ ++ + +++ NPSNP G+ + L+ I++ + + ++ DEIY
Sbjct: 157 DLKQLESLIDE------KTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADEIY 210
Query: 242 AATVFT--KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVG--IIYSYNDQV 297
VF+ K +++ + ++C L+ PG+R+G +I+ D
Sbjct: 211 GDMVFSDCKYEPMATLSTNVPI-LSCG--------GLAXRWLVPGWRLGWILIHDRRDIF 261
Query: 298 VSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGC 357
+ R GLV +Q ++ ++ + + + + +F + + G
Sbjct: 262 GNEIRD----GLV-KLSQRILGPCTIVQGALKSILQRTPQEFYQDTLSFLKSNADLCYGA 316
Query: 358 LKSNAG-----------LFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP 406
L + G L + +++ H + +E ++ +I E ++ P + F P
Sbjct: 317 LSAIPGLQPVRPSGAMYLMVGIEMEHFPE---FENDVEFTERLIAEQSVHCLPATCFEYP 373
Query: 407 NPGWFRVCFANMDDRTMEIALSRITSF 433
N +FRV + +E A SRI F
Sbjct: 374 N--FFRVVITVPEVMMLE-ACSRIQEF 397
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 34/229 (14%)
Query: 169 VPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFI 228
VP+ D N ++ + +A +K ++ +++I NPSNP +D+ +L + + +
Sbjct: 220 VPIHADPDNGWQYS----DAELDKLKDPDVKI--FFCVNPSNPPSVKMDQRSLDRVRAIV 273
Query: 229 NEK--NIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFR 286
E+ ++ ++ D++Y T F S+ + C RN + +VYS SK G G+R
Sbjct: 274 AEQRPDLLILTDDVYG----TFADEFQSLFSV------CPRNTL-LVYSFSKYFGATGWR 322
Query: 287 VGIIYSYNDQVVSCARKMSSFGLVSSQT-QHLIATMLSDD---QFVEKFIAESAKRIAER 342
+G+I ++ D V A +S + + H ++L D +F+++ +A+S + +A
Sbjct: 323 LGVIAAHKDNVFDHA--LSQLPESAKKALDHRYRSLLPDVRSLKFIDRLVADS-RVVALN 379
Query: 343 HKAFTWGLSQVGIGCLKSNAGLFLWMD----LHHLLKEQTYEAEMALWR 387
H A QV + LF MD LK+ E L+R
Sbjct: 380 HTAGLSTPQQVQMVLFS----LFALMDEADAYKQALKQLIRRREATLYR 424
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 18/173 (10%)
Query: 95 GLPEFRNAVAKFMGKVRGNRITFDP-DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYY 153
G P A++ GK+ +I DP + I+++ GA G+ L DPGD ++ P+Y
Sbjct: 62 GHPALVKALSCLYGKIYQRQI--DPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFY 119
Query: 154 PGFDRDLRWRTGVQL-VPVVCD-------SSNDFKVTMEALEAAYEKAQESNIRIKGVLI 205
++ +R V + +P+ +S+D+ LE+ + + K +++
Sbjct: 120 DCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSS------KTKAIIL 173
Query: 206 TNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEI 258
P NPLG R+ L+ I + + + DE+Y V+T + V IA +
Sbjct: 174 NTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTH-VKIATL 225
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 18/173 (10%)
Query: 95 GLPEFRNAVAKFMGKVRGNRITFDP-DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYY 153
G P A++ GK+ +I DP + I+++ GA G+ L DPGD ++ P+Y
Sbjct: 62 GHPALVKALSCLYGKIYQRQI--DPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFY 119
Query: 154 PGFDRDLRWRTGVQL-VPVVCD-------SSNDFKVTMEALEAAYEKAQESNIRIKGVLI 205
++ +R V + +P+ +S+D+ LE+ + + K +++
Sbjct: 120 DCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSS------KTKAIIL 173
Query: 206 TNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEI 258
P NPLG R+ L+ I + + + DE+Y V+T + V IA +
Sbjct: 174 NTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTH-VKIATL 225
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 148/363 (40%), Gaps = 52/363 (14%)
Query: 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYP 154
G P A++K ++ I + +V G + T+ + D GD ++ P++
Sbjct: 78 GHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHV-DEGDEVIIIEPFFD 136
Query: 155 GFDRDLRWRTGV-QLVPVVCD------SSNDFKVTMEALEAAYEKAQESNIRIKGVLITN 207
++ ++ G+ + +P+ + SS D+ + LEA + N + K ++I
Sbjct: 137 CYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALF------NEKTKMIIINT 190
Query: 208 PSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFT--KESSFVSIAEIIDQDIAC 265
P NPLG +DR L+ + + + N+ V DE+Y VF + ++ + ++ I
Sbjct: 191 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTIT- 249
Query: 266 NRNLIHIVYSLSKDMGFPGFRVGIIYS-----------YNDQVVSCARKMSSFGLVSSQT 314
+ S G+++G Y + + V +CA + V +T
Sbjct: 250 -------IGSAGXTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFET 302
Query: 315 QHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFL---WMDLH 371
+ + + S + + F + S + +A+R ++ L++VG+ G F+ W L
Sbjct: 303 E--LKRLKSPECY---FNSISGELMAKRDYMASF-LAEVGMNPTVPQGGYFMVADWSSLD 356
Query: 372 H---LLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC-PNP----GWFRVCFANMDDRTM 423
L +E + + + V L P S+F+ PN + R CF D+
Sbjct: 357 SKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQ 416
Query: 424 EIA 426
+ A
Sbjct: 417 KAA 419
>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2ZP7|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|F Chain F, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|3CBF|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|3CBF|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|2Z1Y|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2Z1Y|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2ZP7|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|E Chain E, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZYJ|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
pdb|2ZYJ|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
Length = 397
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 131/324 (40%), Gaps = 32/324 (9%)
Query: 115 ITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCD 174
I P+ ++++ G+ A + V D G L+ P Y G + R + L +
Sbjct: 87 IGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGE 146
Query: 175 SSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIH 234
D ++ALE ++ + + LI + NP G K ++ + E+ +
Sbjct: 147 EGPD----LDALEEVLKRERPRFL----YLIPSFQNPTGGLTPLPARKRLLQMVMERGLV 198
Query: 235 LVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYN 294
+V D+ Y F E+ S+ E+ + A +I++ S SK + PG RV ++
Sbjct: 199 VVEDDAYRELYFG-EARLPSLFELARE--AGYPGVIYL-GSFSKVLS-PGLRVAFAVAHP 253
Query: 295 DQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRI-AERHKAFTWGLSQ- 352
+ + + L + ++ L + F E+ E +R+ E+ +A L +
Sbjct: 254 EALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERL--ERVRRVYREKAQAMLHALDRE 311
Query: 353 --VGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVS--PGSSFHCPNP 408
+ + G+F+WM+L L + L+R + E NV+ PG F
Sbjct: 312 VPKEVRYTRPKGGMFVWMELPKGLSAE------GLFRRALEE---NVAFVPGGPFFANGG 362
Query: 409 G--WFRVCFANMDDRTMEIALSRI 430
G R+ +A +D + + R+
Sbjct: 363 GENTLRLSYATLDREGIAEGVRRL 386
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Query: 200 IKGVLITNPSNPLGTFLDRETLKDIVSFINEK--NIHLVCDEIYAATVFTKESSFVSIAE 257
IK NPSNP +D+ +L+ + + + E ++ ++ D++Y T F S+
Sbjct: 246 IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG----TFADDFQSLFA 301
Query: 258 IIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCA-RKMSSFGLVSSQTQH 316
I C N + +VYS SK G G+R+G++ ++ V A K+ V+ H
Sbjct: 302 I------CPENTL-LVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVA--LDH 352
Query: 317 LIATMLSDD---QFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMD---- 369
++L D +F+++ +A+S + +A H A QV + LF MD
Sbjct: 353 RYRSLLPDVRSLKFIDRLVADS-RAVALNHTAGLSTPQQVQMALFS----LFALMDEADE 407
Query: 370 LHHLLKEQTYEAEMALWR 387
H LK+ E L+R
Sbjct: 408 YKHTLKQLIRRRETTLYR 425
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Query: 200 IKGVLITNPSNPLGTFLDRETLKDIVSFINEK--NIHLVCDEIYAATVFTKESSFVSIAE 257
IK NPSNP +D+ +L+ + + + E ++ ++ D++Y T F S+
Sbjct: 246 IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG----TFADDFQSLFA 301
Query: 258 IIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCA-RKMSSFGLVSSQTQH 316
I C N + +VYS SK G G+R+G++ ++ V A K+ V+ H
Sbjct: 302 I------CPENTL-LVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVA--LDH 352
Query: 317 LIATMLSDD---QFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMD---- 369
++L D +F+++ +A+S + +A H A QV + LF MD
Sbjct: 353 RYRSLLPDVRSLKFIDRLVADS-RAVALNHTAGLSTPQQVQMALFS----LFALMDEADE 407
Query: 370 LHHLLKEQTYEAEMALWR 387
H LK+ E L+R
Sbjct: 408 YKHTLKQLIRRRETTLYR 425
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 135/325 (41%), Gaps = 38/325 (11%)
Query: 122 IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKV 181
++++ G + A + LA+PG LVP P + + + L G+++ +++
Sbjct: 121 VILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLY-KTLAESMGIEVKLYNLLPEKSWEI 179
Query: 182 TMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIY 241
++ LE ++ + +++ NPSNP G+ + L+ I++ + + ++ DEIY
Sbjct: 180 DLKQLEYLIDE------KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIY 233
Query: 242 AATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVG--IIYSYNDQVVS 299
VF+ + + +A + D+ I L+K PG+R+G +I+ D +
Sbjct: 234 GDMVFS-DCKYEPLA-TLSTDVP-----ILSCGGLAKRWLVPGWRLGWILIHDRRDIFGN 286
Query: 300 CARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLK 359
R GLV +Q ++ ++ + + +F + + G L
Sbjct: 287 EIRD----GLV-KLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALA 341
Query: 360 SNAG-----------LFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNP 408
+ G L + +++ H +E ++ ++ E ++ P + F PN
Sbjct: 342 AIPGLRPVRPSGAMYLMVGIEMEHF---PEFENDVEFTERLVAEQSVHCLPATCFEYPN- 397
Query: 409 GWFRVCFANMDDRTMEIALSRITSF 433
+ RV + +E A SRI F
Sbjct: 398 -FIRVVITVPEVMMLE-ACSRIQEF 420
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 8/138 (5%)
Query: 122 IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKV 181
IV S G A T ++ LV P YP F + V + ++ + +
Sbjct: 85 IVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEXVTTNNRQLCVSPLQKQNDTYAI 144
Query: 182 TMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIY 241
E LE +++ +K L+ +P NP+G +E L + S + N+ +V DEI+
Sbjct: 145 DFEHLEKQFQQG------VKLXLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIH 198
Query: 242 AATVFT--KESSFVSIAE 257
+ ++ + F S++E
Sbjct: 199 SDIIYADHTHTPFASLSE 216
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 108/255 (42%), Gaps = 24/255 (9%)
Query: 128 ATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALE 187
GA E + ++ + L+ P Y ++ + + + GV +V F E +
Sbjct: 84 GNGASEIIELSIS-LFEKILIIVPSYAEYEINAK-KHGVSVV---------FSYLDENMC 132
Query: 188 AAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFT 247
YE + V+I NP+NP G +++E ++ EK ++ DE +
Sbjct: 133 IDYEDIISKIDDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD 192
Query: 248 KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF 307
SSFV EI ++ +C + I+ +++K PG R G + N ++ + + +
Sbjct: 193 PSSSFV--GEI--KNYSC----LFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNP 244
Query: 308 GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVG-IGCLKSNAGLFL 366
++ + L D ++E ES I + K F L+++G I + S F+
Sbjct: 245 WNINCFAEMAAINCLKDTNYIE----ESLLWIKKERKRFIEELNKIGFIKRVFSPHANFV 300
Query: 367 WMDLHHLLKEQTYEA 381
L ++ E+ Y++
Sbjct: 301 LCRLENISGEKLYDS 315
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 131/332 (39%), Gaps = 37/332 (11%)
Query: 115 ITFDPD-RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQL-VPVV 172
+ +DP+ ++++ GAT A L +PG L+ P+Y + + ++ VP+V
Sbjct: 81 VDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLV 140
Query: 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKN 232
D F + +AL A R + ++I +P NP G L L I N
Sbjct: 141 PDGRG-FALDADALRRAVTP------RTRALIINSPHNPTGAVLSATELAAIAEIAVAAN 193
Query: 233 IHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYS 292
+ ++ DE+Y VF + D R + + S + G+++G
Sbjct: 194 LVVITDEVYEHLVFDHARHL----PLAGFDGMAERTI--TISSAAXMFNCTGWKIGWACG 247
Query: 293 YNDQV--VSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGL 350
+ + V A++ S+ + + Q +A L + + ++A + R GL
Sbjct: 248 PAELIAGVRAAKQYLSY-VGGAPFQPAVALALDTE---DAWVAALRNSLRARRDRLAAGL 303
Query: 351 SQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPG- 409
+++G S FL D L + + E AL +V + P S+F P G
Sbjct: 304 TEIGFAVHDSYGTYFLCADPRPLGYDDSTEFCAAL----PEKVGVAAIPMSAFCDPAAGQ 359
Query: 410 -------W---FRVCFANMDDRTMEIALSRIT 431
W R F DD T++ A+ R++
Sbjct: 360 ASQQADVWNHLVRFTFCKRDD-TLDEAIRRLS 390
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 81/196 (41%), Gaps = 27/196 (13%)
Query: 95 GLPEFRNAVAK--FMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPY 152
GLP R +++ + G V I + G ++F P + P
Sbjct: 76 GLPALRQKLSEDFYRGFVDAKEI------FISDGAKVDLFRLLSFF--GPNQTVAIQDPS 127
Query: 153 YPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPL 212
YP + R +++ + C N F E ++++I I + + +P+NP
Sbjct: 128 YPAYLDIARLTGAKEIIALPCLQENAFFP---------EFPEDTHIDI--LCLCSPNNPT 176
Query: 213 GTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHI 272
GT L+++ L+ IV + E I ++ D Y +T + S SI EI D
Sbjct: 177 GTVLNKDQLRAIVHYAIEHEILILFDAAY-STFISDPSLPKSIFEIPDARFCAIE----- 230
Query: 273 VYSLSKDMGFPGFRVG 288
+ S SK +GF G R+G
Sbjct: 231 INSFSKPLGFAGIRLG 246
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 94/239 (39%), Gaps = 29/239 (12%)
Query: 145 AFLVP-TPYYPGF-DRDLRWRTGVQLVPVVCDSSND-------FKVTMEALEAAYEKAQE 195
+ L+P TP Y G+ D + + ++P + + ++D ++V EALE +
Sbjct: 146 SILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEG 205
Query: 196 SNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSI 255
RI + + P+NP G L E + +I L+ D Y
Sbjct: 206 ---RIGAICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAYGX----------PF 252
Query: 256 AEIIDQDIACN-RNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQT 314
II D N N + +SLSK +G PG R GII + + + + + L ++
Sbjct: 253 PNIIYSDAHLNWDNNTILCFSLSK-IGLPGXRTGIIVADAKVIEAVSAXNAVVNLAPTRF 311
Query: 315 QHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIG-----CLKSNAGLFLWM 368
IAT L + +++ K ++ L + +G K +FLW+
Sbjct: 312 GAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLXIHKPEGAIFLWL 370
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 26/197 (13%)
Query: 200 IKGVLITNPSNPLGTFLDRETLKDIVSFINEK--NIHLVCDEIYAATVFTKESSFVSIAE 257
IK NPSNP +D +L+ + + E ++ ++ D++Y T F S+
Sbjct: 246 IKIFFCVNPSNPPSVKMDERSLERVRKIVAEHRPDLMILTDDVYG----TFADGFQSLFA 301
Query: 258 IIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM---SSFGLVSSQT 314
I C N + +VYS SK G G+R+G++ ++ + + A S + +
Sbjct: 302 I------CPANTL-LVYSFSKYFGATGWRLGVVAAHKENIFDLALGRLPESEKTALDDRY 354
Query: 315 QHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMD----L 370
+ L+ + S +F+++ +A+S + +A H A QV + LF MD
Sbjct: 355 RSLLPDVRS-LKFLDRLVADS-RAVALNHTAGLSTPQQVQMTLFS----LFALMDESDQY 408
Query: 371 HHLLKEQTYEAEMALWR 387
H LK+ E L+R
Sbjct: 409 KHTLKQLIRRREATLYR 425
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 132/334 (39%), Gaps = 53/334 (15%)
Query: 122 IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKV 181
I+ G A ++ GDA L+ +P Y F R +R + + + F++
Sbjct: 122 ILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEI 181
Query: 182 TMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIY 241
E LE + ++N++I L+ +P NP G D + L I + + LV DEI+
Sbjct: 182 DFEQLE---KDIIDNNVKI--YLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIH 236
Query: 242 AATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCA 301
QD+A N H + +L D + F II S + + A
Sbjct: 237 -------------------QDLALFGNTHHSLNTL--DASYKDFT--IILSSATKTFNIA 273
Query: 302 RKMSSFGLVSSQT-------------QHLIAT--MLSDD---QFVEKFIAESAKRIAERH 343
+SF ++ +++ QH + T M++ Q+ + ++ E I
Sbjct: 274 GTKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNI 333
Query: 344 KAFTWGL-SQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSS 402
K L ++ I ++ +W+D Q +E + NE K+ ++ G+
Sbjct: 334 KLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQPQLSEK-----LQNEAKVVLNDGAH 388
Query: 403 FHCPNPGWFRVCFANMDDRTMEIALSRITSFMLK 436
F + R+ A + T++ ALSRI S K
Sbjct: 389 FGKEGKYFARLNVATPKN-TVQEALSRIISVFGK 421
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 100/264 (37%), Gaps = 34/264 (12%)
Query: 115 ITFDPDRIVMSGGATGAHETVA---FCLADPGDAFLVPTPYYP---GFDRDLRWRTGVQL 168
+ DP R ++ G+ E +A L +P D L+P YP G R RT L
Sbjct: 82 VGLDPRREALA--LIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRT--FL 137
Query: 169 VPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFI 228
+P+ D D K E + +E+ + +L+ P+NP G D ++ +
Sbjct: 138 IPLREDGLADLKAVPEGV------WREAKV----LLLNYPNNPTGAVADWGYFEEALGLA 187
Query: 229 NEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVG 288
+ + L+ D Y V+ E+ + + + ++SLSK GFR+G
Sbjct: 188 RKHGLWLIHDNPYVDQVYEGEAPS-------PLALPGAKERVVELFSLSKSYNLAGFRLG 240
Query: 289 IIYSYNDQVVSCAR--KMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAF 346
+ + R + F + + + + + + V + A+ ER
Sbjct: 241 FALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGY----ARVYRERALGM 296
Query: 347 TWGLSQVGIGCLKSNAGLFLWMDL 370
L V + L A ++LW L
Sbjct: 297 AEALKGV-LSLLPPRATMYLWGRL 319
>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
pdb|1VP4|B Chain B, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
Length = 425
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 119/292 (40%), Gaps = 35/292 (11%)
Query: 94 HGLPEFRNAVAKFMGKVRGNRIT-FDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPY 152
G P + + K + + G IT D D ++ + G+ A + + D ++ P
Sbjct: 85 EGDPVLKQQILKLLERXYG--ITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPA 142
Query: 153 YPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV----LITNP 208
Y G R +V + D D V L + ++K N +IK V +++N
Sbjct: 143 YLGAINAFRQYLANFVVVPLEDDGXDLNVLERKL-SEFDK----NGKIKQVKFIYVVSNF 197
Query: 209 SNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRN 268
NP G E K +V + ++ +V D+ Y A + E+ + I + R
Sbjct: 198 HNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGET-----VDPIFKIGGPER- 251
Query: 269 LIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFV 328
+ ++ + SK + PG R+G + + + + S L S H +A +++
Sbjct: 252 -VVLLNTFSKVLA-PGLRIGXVAGSKEFIRKIVQAKQSADLCSPAITHRLAA-----RYL 304
Query: 329 EKF-IAESAKRIAERHK--------AFTWGLSQV-GIGCLKSNAGLFLWMDL 370
E++ + E K E ++ A S + G+ +KS GLF+W+ L
Sbjct: 305 ERYDLLEQLKPTIELYRRKRTVXLNALEEYFSDIPGVKWVKSEGGLFIWLTL 356
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 19/182 (10%)
Query: 122 IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKV 181
I+ G T + TVA L P A +V TP + + R L ++G ++ ++ +++
Sbjct: 79 ILAGNGETESIFTVASGL-KPRRAMIV-TPGFAEYGRALA-QSGCEIRRWSLREADGWQL 135
Query: 182 TMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIY 241
T LEA + + + P+NP G +R L+ I NI+L+ DE +
Sbjct: 136 TDAILEALTPD-------LDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAF 188
Query: 242 AATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCA 301
+ E+ F+ + + I ++ SL+K PG R+G + + +D ++
Sbjct: 189 IDFI-PHETGFIPALK--------DNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARM 239
Query: 302 RK 303
R+
Sbjct: 240 RR 241
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 147 LVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLIT 206
+VPTP YP F L + Q + D++ + + +E ++ S +L+
Sbjct: 109 IVPTPAYPPFFHLL---SATQREGIFIDATG--GINLHDVEKGFQAGARS------ILLC 157
Query: 207 NPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVS 254
NP NPLG E L ++ + + ++ DEI+A VF + + +
Sbjct: 158 NPYNPLGXVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAA 205
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 112/281 (39%), Gaps = 43/281 (15%)
Query: 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFD 157
E R+ +A ++ K G +T D + + G+ + + PG L + P +
Sbjct: 70 ELRDELAAYITKQTGVAVTRD--NLWAANGSNEILQQLLQAFGGPGRTAL---GFQPSYS 124
Query: 158 RDLRWRTGVQLVPVVCDSSNDFKVTME-ALEAAYEKAQESNIRIKGVLITNPSNPLGTFL 216
G + DF++ M+ ALE +A++ +I V +T P+NP G
Sbjct: 125 MHPILAKGTHTEFIAVSRGADFRIDMDVALEEI--RAKQPDI----VFVTTPNNPTG--- 175
Query: 217 DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSL 276
D +L D+ IN ++ DE YA F+ S ++ E + +R ++
Sbjct: 176 DVTSLDDVERIINVAPGIVIVDEAYAE--FSPSPSATTLLEKYPTKLVVSR-------TM 226
Query: 277 SKDMGFPGFRVGIIY---SYNDQV--VSCARKMSSFGLVSSQTQHLIATMLSDDQF--VE 329
SK F G R+G ++ D V V +S+ SQ ++A S D VE
Sbjct: 227 SKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSAL----SQAAAIVALRHSADTLGTVE 282
Query: 330 KFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDL 370
K E R+A R L ++G + S + + D
Sbjct: 283 KLSVERV-RVAAR-------LEELGYAVVPSESNFVFFGDF 315
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 112/281 (39%), Gaps = 43/281 (15%)
Query: 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFD 157
E R+ +A ++ K G +T D + + G+ + + PG L + P +
Sbjct: 73 ELRDELAAYITKQTGVAVTRD--NLWAANGSNEILQQLLQAFGGPGRTAL---GFQPSYS 127
Query: 158 RDLRWRTGVQLVPVVCDSSNDFKVTME-ALEAAYEKAQESNIRIKGVLITNPSNPLGTFL 216
G + DF++ M+ ALE +A++ +I V +T P+NP G
Sbjct: 128 MHPILAKGTHTEFIAVSRGADFRIDMDVALEEI--RAKQPDI----VFVTTPNNPTG--- 178
Query: 217 DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSL 276
D +L D+ IN ++ DE YA F+ S ++ E + +R ++
Sbjct: 179 DVTSLDDVERIINVAPGIVIVDEAYAE--FSPSPSATTLLEKYPTKLVVSR-------TM 229
Query: 277 SKDMGFPGFRVGIIY---SYNDQV--VSCARKMSSFGLVSSQTQHLIATMLSDDQF--VE 329
SK F G R+G ++ D V V +S+ SQ ++A S D VE
Sbjct: 230 SKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSAL----SQAAAIVALRHSADTLGTVE 285
Query: 330 KFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDL 370
K E R+A R L ++G + S + + D
Sbjct: 286 KLSVERV-RVAAR-------LEELGYAVVPSESNFVFFGDF 318
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 67/171 (39%), Gaps = 10/171 (5%)
Query: 93 YHGLP-EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTP 151
Y +P E+ AVA + + +R D V + G A PGD LV P
Sbjct: 60 YESVPAEYYKAVADW--EEIEHRARPKEDWCVFASGVVPAISAXVRQFTSPGDQILVQEP 117
Query: 152 YYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNP 211
Y F + + + ++ + V LE EK ++R + NP NP
Sbjct: 118 VYNXFYSVIEGNGRRVISSDLIYENSKYSVNWADLE---EKLATPSVRXX--VFCNPHNP 172
Query: 212 LGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQD 262
+G E +K I + + L+ DEI+ V T E ++ A +D D
Sbjct: 173 IGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDED--ITPAFTVDWD 221
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 141/366 (38%), Gaps = 49/366 (13%)
Query: 95 GLPEFRNAVAKFMGKVRGN-RITFDP-----DRIVMSGGATGAHETVAFCLADPGDAFLV 148
G+PE + + + K+ I + P D V SG G + + +PGD L+
Sbjct: 79 GIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII-NPGDNVLL 137
Query: 149 PTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAY--EKAQESNIRIKGVLIT 206
P Y G + L G ++ V D S ++ + + + E A+ L T
Sbjct: 138 DEPAYSGTLQSLH-PLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYT 196
Query: 207 NPS--NPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIA 264
P+ NP G L E K+I + + ++ D+ Y F K ++ +D +
Sbjct: 197 VPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVI 256
Query: 265 CNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSD 324
+ I+ S G R+G + + + L S L+ + L
Sbjct: 257 RADSFSKIISS--------GLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLH 308
Query: 325 DQFVEKFIAE--------SAKRIAERHKAFTW--GLSQVGIGCLKSNAGLFLWMDLHHL- 373
+ E F+A S ++ A A W GL++ + AG+FLW+ + +
Sbjct: 309 EWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA----AGMFLWIKVKGIN 364
Query: 374 -LKEQTYEAEMALWRVIINEVKLNVSPGSSFH----CPNPGWFRVCFANMDDRTMEIALS 428
+KE E + + +++ PG++F+ P+P + R F++ M++A
Sbjct: 365 DVKELIEEKAVKMGVLML--------PGNAFYVDSSAPSP-YLRASFSSASPEQMDVAFQ 415
Query: 429 RITSFM 434
+ +
Sbjct: 416 VLAQLI 421
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 25/213 (11%)
Query: 78 AEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAF 137
A+G N++ + G+ R A+A+ ++ G + D D I ++ GAT A
Sbjct: 57 AQGANQYAPMT------GVQALREAIAQKTERLYGYQPDADSD-ITVTAGATEALYAAIT 109
Query: 138 CLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197
L GD + P Y + + G+ V + F+V + A +
Sbjct: 110 ALVRNGDEVICFDPSYDSYAPAIALSGGI--VKRMALQPPHFRVDWQEFAALLSE----- 162
Query: 198 IRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE--SSFVSI 255
R + V++ P NP T + + I I ++ DE+Y F+++ +S ++
Sbjct: 163 -RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAH 221
Query: 256 AEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVG 288
++ ++ +A V S K G++VG
Sbjct: 222 PQLRERAVA--------VSSFGKTYHMTGWKVG 246
>pdb|3FKD|A Chain A, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|B Chain B, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|C Chain C, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|D Chain D, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 17/94 (18%)
Query: 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIA--EIID-Q 261
+ NP+NP G L R +I+ +N+ + T F + S+VS E+I
Sbjct: 135 LCNPNNPDGRLLQR---TEILRLLND----------HPDTTFVLDQSYVSFTTEEVIRPA 181
Query: 262 DIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYND 295
DI +NL+ VYS S G PG R+G I + D
Sbjct: 182 DIKGRKNLV-XVYSFSHAYGIPGLRIGYIVANKD 214
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 141/366 (38%), Gaps = 49/366 (13%)
Query: 95 GLPEFRNAVAKFMGKVRGN-RITFDP-----DRIVMSGGATGAHETVAFCLADPGDAFLV 148
G+PE + + + K+ I + P D V SG G + + +PGD L+
Sbjct: 79 GIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII-NPGDNVLL 137
Query: 149 PTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAY--EKAQESNIRIKGVLIT 206
P Y G + L G ++ V D S ++ + + + E A+ L T
Sbjct: 138 DEPAYSGTLQSLH-PLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYT 196
Query: 207 NPS--NPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIA 264
P+ NP G L E K+I + + ++ D+ Y F K ++ +D +
Sbjct: 197 VPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVI 256
Query: 265 CNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSD 324
+ I+ S G R+G + + + L S L+ + L
Sbjct: 257 RADSFSKIISS--------GLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLH 308
Query: 325 DQFVEKFIAE--------SAKRIAERHKAFTW--GLSQVGIGCLKSNAGLFLWMDLHHL- 373
+ E F+A S ++ A A W GL++ + AG+FLW+ + +
Sbjct: 309 EWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA----AGMFLWIKVKGIN 364
Query: 374 -LKEQTYEAEMALWRVIINEVKLNVSPGSSFH----CPNPGWFRVCFANMDDRTMEIALS 428
+KE E + + +++ PG++F+ P+P + R F++ M++A
Sbjct: 365 DVKELIEEKAVKMGVLML--------PGNAFYVDSSAPSP-YLRASFSSASPEQMDVAFQ 415
Query: 429 RITSFM 434
+ +
Sbjct: 416 VLAQLI 421
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 141/366 (38%), Gaps = 49/366 (13%)
Query: 95 GLPEFRNAVAKFMGKVRGN-RITFDP-----DRIVMSGGATGAHETVAFCLADPGDAFLV 148
G+PE + + + K+ I + P D V SG G + + +PGD L+
Sbjct: 79 GIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII-NPGDNVLL 137
Query: 149 PTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAY--EKAQESNIRIKGVLIT 206
P Y G + L G ++ V D S ++ + + + E A+ L T
Sbjct: 138 DEPAYSGTLQSLH-PLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYT 196
Query: 207 NPS--NPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIA 264
P+ NP G L E K+I + + ++ D+ Y F K ++ +D +
Sbjct: 197 VPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVI 256
Query: 265 CNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSD 324
+ I+ S G R+G + + + L S L+ + L
Sbjct: 257 RADSFSKIISS--------GLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLH 308
Query: 325 DQFVEKFIAE--------SAKRIAERHKAFTW--GLSQVGIGCLKSNAGLFLWMDLHHL- 373
+ E F+A S ++ A A W GL++ + AG+FLW+ + +
Sbjct: 309 EWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA----AGMFLWIKVKGIN 364
Query: 374 -LKEQTYEAEMALWRVIINEVKLNVSPGSSFH----CPNPGWFRVCFANMDDRTMEIALS 428
+KE E + + +++ PG++F+ P+P + R F++ M++A
Sbjct: 365 DVKELIEEKAVKMGVLML--------PGNAFYVDSSAPSP-YLRASFSSASPEQMDVAFQ 415
Query: 429 RITSFM 434
+ +
Sbjct: 416 VLAQLI 421
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 141/366 (38%), Gaps = 49/366 (13%)
Query: 95 GLPEFRNAVAKFMGKVRGN-RITFDP-----DRIVMSGGATGAHETVAFCLADPGDAFLV 148
G+PE + + + K+ I + P D V SG G + + +PGD L+
Sbjct: 79 GIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII-NPGDNVLL 137
Query: 149 PTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAY--EKAQESNIRIKGVLIT 206
P Y G + L G ++ V D S ++ + + + E A+ L T
Sbjct: 138 DEPAYSGTLQSLH-PLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYT 196
Query: 207 NPS--NPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIA 264
P+ NP G L E K+I + + ++ D+ Y F K ++ +D +
Sbjct: 197 VPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVI 256
Query: 265 CNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSD 324
+ I+ S G R+G + + + L S L+ + L
Sbjct: 257 RADSFSXIISS--------GLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLH 308
Query: 325 DQFVEKFIAE--------SAKRIAERHKAFTW--GLSQVGIGCLKSNAGLFLWMDLHHL- 373
+ E F+A S ++ A A W GL++ + AG+FLW+ + +
Sbjct: 309 EWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA----AGMFLWIKVKGIN 364
Query: 374 -LKEQTYEAEMALWRVIINEVKLNVSPGSSFH----CPNPGWFRVCFANMDDRTMEIALS 428
+KE E + + +++ PG++F+ P+P + R F++ M++A
Sbjct: 365 DVKELIEEKAVKMGVLML--------PGNAFYVDSSAPSP-YLRASFSSASPEQMDVAFQ 415
Query: 429 RITSFM 434
+ +
Sbjct: 416 VLAQLI 421
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 30/142 (21%)
Query: 163 RTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLK 222
R ++L+P + + V E L E + ++ P+NP G + E L
Sbjct: 155 RPNIELLP---EGQFKYHVDFEHLHIGEETGX--------ICVSRPTNPTGNVITDEELX 203
Query: 223 DIVSFINEKNIHLVCDEIYA----ATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSK 278
+ N+ NI LV D Y +F++ N N+I + SLSK
Sbjct: 204 KLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPL------------WNPNII-LCXSLSK 250
Query: 279 DMGFPGFRVGIIYSYNDQVVSC 300
+G PG R GII + ND+ ++
Sbjct: 251 -LGLPGSRCGIIIA-NDKTITA 270
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 141/366 (38%), Gaps = 49/366 (13%)
Query: 95 GLPEFRNAVAKFMGKVRGN-RITFDP-----DRIVMSGGATGAHETVAFCLADPGDAFLV 148
G+PE + + + K+ I + P D V SG G + + +PGD L+
Sbjct: 81 GIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII-NPGDNVLL 139
Query: 149 PTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAY--EKAQESNIRIKGVLIT 206
P Y G + L G ++ V D S ++ + + + E A+ L T
Sbjct: 140 DEPAYSGTLQSLH-PLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYT 198
Query: 207 NPS--NPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIA 264
P+ NP G L E K+I + + ++ D+ Y F K ++ +D +
Sbjct: 199 VPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVI 258
Query: 265 CNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSD 324
+ I+ S G R+G + + + L S L+ + L
Sbjct: 259 RADSFSXIISS--------GLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLH 310
Query: 325 DQFVEKFIAE--------SAKRIAERHKAFTW--GLSQVGIGCLKSNAGLFLWMDLHHL- 373
+ E F+A S ++ A A W GL++ + AG+FLW+ + +
Sbjct: 311 EWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA----AGMFLWIKVKGIN 366
Query: 374 -LKEQTYEAEMALWRVIINEVKLNVSPGSSFH----CPNPGWFRVCFANMDDRTMEIALS 428
+KE E + + +++ PG++F+ P+P + R F++ M++A
Sbjct: 367 DVKELIEEKAVKMGVLML--------PGNAFYVDSSAPSP-YLRASFSSASPEQMDVAFQ 417
Query: 429 RITSFM 434
+ +
Sbjct: 418 VLAQLI 423
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 94/245 (38%), Gaps = 26/245 (10%)
Query: 199 RIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEI 258
R + +P+NP G R+ L +V F ++ D YAA F ++ S SI E
Sbjct: 212 RTDVIFFCSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYAA--FIEDGSPRSIYE- 268
Query: 259 IDQDIACNRNLIHIVYSLSKDMGFPGFRVG-------IIYSYNDQVVSCARKM--SSFGL 309
I R + V S SK GF G R+G ++YS +++ ++ +SF
Sbjct: 269 ----IPGAREVAIEVSSFSKFAGFTGVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNG 324
Query: 310 VSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMD 369
S+ Q LS E I E K L +G+ +LW+
Sbjct: 325 ASNIAQAGGLACLSSGGLKE--IRSVNNYYKENRKILMDTLVSLGLKVYGGVNAPYLWV- 381
Query: 370 LHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSR 429
H ++++ ++ I+ + PGS F + R+ D +E A R
Sbjct: 382 --HFKGSKSWD----VFNEILENTHIITVPGSGFGPGGEEYLRISGFGRRDHIVE-ASKR 434
Query: 430 ITSFM 434
+ +F
Sbjct: 435 LQNFF 439
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 140/366 (38%), Gaps = 49/366 (13%)
Query: 95 GLPEFRNAVAKFMGKVRGN-RITFDP-----DRIVMSGGATGAHETVAFCLADPGDAFLV 148
G+PE + + + K+ I + P D V SG G + + +PGD L+
Sbjct: 79 GIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLXKVFEMII-NPGDNVLL 137
Query: 149 PTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAY--EKAQESNIRIKGVLIT 206
P Y G + L G ++ V D S ++ + + + E A+ L T
Sbjct: 138 DEPAYSGTLQSLH-PLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYT 196
Query: 207 NPS--NPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIA 264
P+ NP G L E K+I + + ++ D+ Y F ++ +D +
Sbjct: 197 VPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLSMDVDGRVI 256
Query: 265 CNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSD 324
+ I+ S G R+G + + + L S L+ + L
Sbjct: 257 RADSFSKIISS--------GLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLH 308
Query: 325 DQFVEKFIAE--------SAKRIAERHKAFTW--GLSQVGIGCLKSNAGLFLWMDLHHL- 373
+ E F+A S ++ A A W GL++ + AG+FLW+ + +
Sbjct: 309 EWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA----AGMFLWIKVKGIN 364
Query: 374 -LKEQTYEAEMALWRVIINEVKLNVSPGSSFH----CPNPGWFRVCFANMDDRTMEIALS 428
+KE E + + +++ PG++F+ P+P + R F++ M++A
Sbjct: 365 DVKELIEEKAVKMGVLML--------PGNAFYVDSSAPSP-YLRASFSSASPEQMDVAFQ 415
Query: 429 RITSFM 434
+ +
Sbjct: 416 VLAQLI 421
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 200 IKGVLITNPSNPLGTFLDRETLKDIVSFINEKN--IHLVCDEIYAATVFTKESSFVSIAE 257
IK +++ NP+NP D L I + EKN + ++ DE+Y A V +F SI
Sbjct: 245 IKALIVVNPTNPTSKEFDTNALNAIKQAV-EKNPKLXIISDEVYGAFV----PNFKSIYS 299
Query: 258 IIDQDIACNRNLIHIVYSLSKDMGFPGFRVGII 290
++ + +VYS S G G+R+G+I
Sbjct: 300 VVPYNTX-------LVYSYSXLFGCTGWRLGVI 325
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 20/142 (14%)
Query: 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQD 262
V++ NPSNP G L L + ++ L+ DE Y SSF + +
Sbjct: 139 VVLANPSNPTGQALSAGELDQ----LRQRAGKLLIDETY-----VDYSSFRA------RG 183
Query: 263 IACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATML 322
+A N + + S SK G G R+G ++ ++ + + RK F V + H + L
Sbjct: 184 LAYGENEL-VFRSFSKSYGLAGLRLGALFGPSELIAAXKRKQ-WFCNVGTLDLHALEAAL 241
Query: 323 SDDQFVEKFIAESAKRIAERHK 344
+D+ E I AK +A+R +
Sbjct: 242 DNDRAREAHI---AKTLAQRRR 260
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 77/204 (37%), Gaps = 21/204 (10%)
Query: 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMS--GGATGAHETVAFCLADPGD----AFLV 148
GLPE R A A ++ K R + +T D D ++ G V L D A +
Sbjct: 67 GLPELRQACANWL-KRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVS 125
Query: 149 PTPYYPGFDRDLRWRTG-VQLVPVVCDSSN-DFKVTMEALEAAYEKAQESNIRIKGVLIT 206
P P+Y ++ G + S N D++ E E R K V +
Sbjct: 126 PNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISE----------EVWKRTKLVFVC 175
Query: 207 NPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACN 266
+P+NP G+ LD + K++ ++ + DE Y+ F + + +
Sbjct: 176 SPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAA--AQLGRS 233
Query: 267 RNLIHIVYSLSKDMGFPGFRVGII 290
R + SLS PG R G +
Sbjct: 234 RQKLLXFTSLSXRSNVPGLRSGFV 257
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 30/229 (13%)
Query: 119 PDRIVMSGGATGAHETVAFCLADPG-DAFLVPTPYYPGFDRDLRWRTGVQ--LVPVVCDS 175
P+++++S GA E + +PG DA L P Y + GV+ VP + +
Sbjct: 75 PEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYSVSAE-TIGVECRTVPTLDNW 133
Query: 176 SNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHL 235
D + + L+ +K V + +P+NP G ++ + + ++ K I +
Sbjct: 134 QLDLQGISDKLDG-----------VKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAI-V 181
Query: 236 VCDEIYAATVFTKESSFVS-IAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYN 294
V DE Y F ++S +AE + I+ +LSK G R G + N
Sbjct: 182 VADEAYIE--FCPQASLAGWLAEYPH---------LAILRTLSKAFALAGLRCGFTLA-N 229
Query: 295 DQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERH 343
++V++ K+ + +S+ + A LS V A+ IAER
Sbjct: 230 EEVINLLXKVIAPYPLSTPVADIAAQALSPQGIVAXR-ERVAQIIAERE 277
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 140/366 (38%), Gaps = 49/366 (13%)
Query: 95 GLPEFRNAVAKFMGKVRGN-RITFDP-----DRIVMSGGATGAHETVAFCLADPGDAFLV 148
G+PE + + + K+ I + P D V SG G + + +PGD L+
Sbjct: 79 GIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII-NPGDNVLL 137
Query: 149 PTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAY--EKAQESNIRIKGVLIT 206
P Y G + L G ++ V D S ++ + + + E A+ L T
Sbjct: 138 DEPAYSGTLQSLH-PLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYT 196
Query: 207 NPS--NPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIA 264
P+ NP G L E K+I + + ++ D+ Y F ++ +D +
Sbjct: 197 VPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLSMDVDGRVI 256
Query: 265 CNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSD 324
+ I+ S G R+G + + + L S L+ + L
Sbjct: 257 RADSFSKIISS--------GLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLH 308
Query: 325 DQFVEKFIAE--------SAKRIAERHKAFTW--GLSQVGIGCLKSNAGLFLWMDLHHL- 373
+ E F+A S ++ A A W GL++ + AG+FLW+ + +
Sbjct: 309 EWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA----AGMFLWIKVKGIN 364
Query: 374 -LKEQTYEAEMALWRVIINEVKLNVSPGSSFH----CPNPGWFRVCFANMDDRTMEIALS 428
+KE E + + +++ PG++F+ P+P + R F++ M++A
Sbjct: 365 DVKELIEEKAVKMGVLML--------PGNAFYVDSSAPSP-YLRASFSSASPEQMDVAFQ 415
Query: 429 RITSFM 434
+ +
Sbjct: 416 VLAQLI 421
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 30/229 (13%)
Query: 119 PDRIVMSGGATGAHETVAFCLADPG-DAFLVPTPYYPGFDRDLRWRTGVQ--LVPVVCDS 175
P+++++S GA E + +PG DA L P Y + GV+ VP + +
Sbjct: 75 PEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAE-TIGVECRTVPTLDNW 133
Query: 176 SNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHL 235
D + + L+ +K V + +P+NP G ++ + + ++ K I +
Sbjct: 134 QLDLQGISDKLDG-----------VKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAI-V 181
Query: 236 VCDEIYAATVFTKESSFVS-IAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYN 294
V DE Y F ++S +AE + I+ +LSK G R G + N
Sbjct: 182 VADEAYIE--FCPQASLAGWLAEYPH---------LAILRTLSKAFALAGLRCGFTLA-N 229
Query: 295 DQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERH 343
++V++ K+ + +S+ + A LS Q + A+ IAER
Sbjct: 230 EEVINLLMKVIAPYPLSTPVADIAAQALS-PQGIVAMRERVAQIIAERE 277
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 111/281 (39%), Gaps = 43/281 (15%)
Query: 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFD 157
E R+ +A ++ K G +T D + + G+ + + PG L + P +
Sbjct: 73 ELRDELAAYITKQTGVAVTRD--NLWAANGSNEILQQLLQAFGGPGRTAL---GFQPSYS 127
Query: 158 RDLRWRTGVQLVPVVCDSSNDFKVTME-ALEAAYEKAQESNIRIKGVLITNPSNPLGTFL 216
G + DF++ M+ ALE +A++ +I V +T P+NP G
Sbjct: 128 MHPILAKGTHTEFIAVSRGADFRIDMDVALEEI--RAKQPDI----VFVTTPNNPTG--- 178
Query: 217 DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSL 276
D +L D+ IN ++ DE YA F+ S ++ E + +R ++
Sbjct: 179 DVTSLDDVERIINVAPGIVIVDEAYAE--FSPSPSATTLLEKYPTKLVVSR-------TM 229
Query: 277 SKDMGFPGFRVGIIY---SYNDQV--VSCARKMSSFGLVSSQTQHLIATMLSDDQF--VE 329
S F G R+G ++ D V V +S+ SQ ++A S D VE
Sbjct: 230 SXAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSAL----SQAAAIVALRHSADTLGTVE 285
Query: 330 KFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDL 370
K E R+A R L ++G + S + + D
Sbjct: 286 KLSVERV-RVAAR-------LEELGYAVVPSESNFVFFGDF 318
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 16/199 (8%)
Query: 63 VEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFD--PD 120
V D NP I EGL ++ + E++ V K+M +R +D D
Sbjct: 38 VADMEFKNPPELI---EGLKKYLDETVLGYTGPTEEYKKTVKKWMK----DRHQWDIQTD 90
Query: 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFK 180
I+ + G A PGD ++ TP Y F ++ + + + + +
Sbjct: 91 WIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYT 150
Query: 181 VTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEI 240
+ + LE + K +L +P NP+G ++ L+ I + + ++ L DEI
Sbjct: 151 IDFQKLEKLSKDKNN-----KALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEI 205
Query: 241 YAATVFT--KESSFVSIAE 257
+ + + + F SI E
Sbjct: 206 HFDLIMPGYEHTVFQSIDE 224
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/343 (18%), Positives = 133/343 (38%), Gaps = 29/343 (8%)
Query: 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYP 154
G R A+A++M K I I+ G+ A + + +PGD +V P Y
Sbjct: 84 GFTPLRLALARWMEK--RYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYL 141
Query: 155 GFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGT 214
+ ++ + + + D +V + + + Q ++I ++ NP G
Sbjct: 142 AAIQAFKYYDP-EFISIPLDDKG-MRVDLLEEKLEELRKQGKRVKIV-YTVSTFQNPAGV 198
Query: 215 FLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVY 274
+ + K ++ NE + +V D Y+ ++ E + I + ++Y
Sbjct: 199 TMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPT---------PPIKHFDDYGRVIY 249
Query: 275 --SLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFI 332
+ SK + PGFR+G + ++ + S L ++ IA ++ ++++ I
Sbjct: 250 LGTFSKILA-PGFRIGWVAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHI 308
Query: 333 AESAKRIAERHKAFTWGLSQV---GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVI 389
+ + R A L + G+ K G+F+ + L + + ++ + R +
Sbjct: 309 PKIIEFYKPRRDAMLEALEEYMPEGVEWTKPEGGMFVRVTL-----PEGIDTKLMMERAV 363
Query: 390 INEVKLNVSPGSSF--HCPNPGWFRVCFANMDDRTMEIALSRI 430
V PG +F H R+ F + + T+ + R+
Sbjct: 364 AKGVAY--VPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRL 404
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 63/331 (19%), Positives = 127/331 (38%), Gaps = 55/331 (16%)
Query: 122 IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKV 181
++ S G A + L D ++ P Y F+ VV +++ + +
Sbjct: 93 LIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNS------------VVKNNNRELII 140
Query: 182 T-MEALEAA-----YEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHL 235
+ ++ LE YE + +K ++ NP NP+G ++ LK + + N+ +
Sbjct: 141 SPLQKLENGNYIMDYEDIENKIKDVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKI 200
Query: 236 VCDEIYAATVFTKESS--FVSIAEIIDQD-IAC----------NRNLIHIVYSLSKDMGF 282
+ DEI++ + K SI++ +++ I C ++V KD
Sbjct: 201 ISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKL 260
Query: 283 PGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAER 342
I + S +S+ S + + + S+ F K+I E+ ++ R
Sbjct: 261 LDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVR 320
Query: 343 HKAFTWGLSQVGIGCLKSNAGLFLWMDLHHL-LKEQTYEAEMALWRVIINEVKLNVSPGS 401
T+ LW+D L L ++ E+ +++ + K+ ++ G+
Sbjct: 321 KPEGTY----------------LLWVDFSALGLSDEELES------ILVQKGKVALNQGN 358
Query: 402 SFHCPNPGWFRVCFANMDDRTMEIALSRITS 432
SF G+ R+ A +E AL RI +
Sbjct: 359 SFGIGGSGYQRINLA-CPRSMLEEALIRIKN 388
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 43/264 (16%)
Query: 117 FDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD-LRWRTGVQLVPVVCDS 175
+ + ++ + G E + L D + TP + + ++ L V+ +P++ D
Sbjct: 82 LEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQNALIEGAEVREIPLLQDG 141
Query: 176 SNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINE--KNI 233
+D + + A++ +++ I V I NP+NP G +++ L DI +F++ ++
Sbjct: 142 EHDLEGXLNAID------EKTTI----VWICNPNNPTGNYIE---LADIQAFLDRVPSDV 188
Query: 234 HLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVG----- 288
+V DE Y V + E ++ + +NLI I + SK G RVG
Sbjct: 189 LVVLDEAYIEYVTPQ-------PEKHEKLVRTYKNLI-ITRTFSKIYGLASARVGYGIAD 240
Query: 289 --IIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAF 346
II N +V +S G Q L + D F+ + +A I ++++AF
Sbjct: 241 KEIIRQLN--IVRPPFNTTSIG------QKLAIEAIKDQAFIGECRTSNANGI-KQYEAF 291
Query: 347 TWGLSQVGIGCLKSNAGLFLWMDL 370
+V + N F+ +DL
Sbjct: 292 AKRFEKVKLYPANGN---FVLIDL 312
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 113/289 (39%), Gaps = 45/289 (15%)
Query: 140 ADPGDAFLVPTPYYPGFDRDLRWRTGVQ--LVPVVCDSSND-FKVTMEALEAAYEKAQES 196
++ G+ ++ TP Y F + + G Q ++PV + D + M LEA K +
Sbjct: 108 SETGEGVVIHTPAYDAFYKAIE---GNQRTVMPVALEKQADGWFCDMGKLEAVLAKPE-- 162
Query: 197 NIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIA 256
K +L+ +P NP G + L+ + + ++ DEI+ V+ E + +
Sbjct: 163 ---CKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVW-GEQPHIPWS 218
Query: 257 EIIDQDIACNRNLIHIVYSLSKDMGFPGFR--VGIIYSYNDQVVSCARKMSSFGLVSSQT 314
+ D A ++ S SK P GII + + + + GL S
Sbjct: 219 NVARGDWA-------LLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSV 271
Query: 315 QHLIATMLSDDQ------FVEKFIAESAKRIAERHKA----FTWGLSQVGIGCLKSNAGL 364
L A + + Q + ++ ++ IA++ A W + Q +
Sbjct: 272 LALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQ---------STY 322
Query: 365 FLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRV 413
W+DL L + AL + +I + K+ + PG ++ G+ R+
Sbjct: 323 LAWLDLRPLNIDDN-----ALQKALIEQEKVAIMPGYTYGEEGRGFVRL 366
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 16/157 (10%)
Query: 135 VAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194
V F +P A+ P P+Y ++ ++ L+ + NDF ++ E Q
Sbjct: 102 VLFDYQNPTIAY--PNPFYQIYEGAAKFIKAKSLLXPLT-KENDFTPSLNEKEL-----Q 153
Query: 195 ESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV-FTKESSFV 253
E ++ V++ +P+NP G L E L V + + L+ DE Y+ T S +
Sbjct: 154 EVDL----VILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLL 209
Query: 254 SIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGII 290
+ + N + +++SLSK PG R G I
Sbjct: 210 EACXLAGNEAFKN---VLVIHSLSKRSSAPGLRSGFI 243
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 140/356 (39%), Gaps = 30/356 (8%)
Query: 86 GIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDA 145
G+ + +Y G R+ +A + G + D ++++ G GA GD
Sbjct: 70 GVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDAR-DGLIITPGTQGALFLAVAATVARGDK 128
Query: 146 FLVPTPYYPGFDRDLRWRTGVQLVPVVCD--SSNDFKVTMEALEAAYEKAQESNIRIKGV 203
+ P Y + + + G + VPV D S+++ + ++ E+A ++ R+
Sbjct: 129 VAIVQPDYFANRKLVEFFEG-EXVPVQLDYVSADETRAGLDL--TGLEEAFKAGARV--F 183
Query: 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDI 263
L +NP+NP G E + I + ++ D++Y+ + S AE
Sbjct: 184 LFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAE-----A 238
Query: 264 ACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLS 323
A + + + S G+R+G+ + + +++ K+ + +VS + +L
Sbjct: 239 AVDAENVVTIXGPSXTESLSGYRLGVAFG-SRAIIARXEKLQA--IVSLRAAGYSQAVLR 295
Query: 324 DDQFVEKFIAESAKRIAERHKAFTWGLSQV-----GIGCLKSNAGLFLWMDLHHLLKEQT 378
+ ++ RIA RH+A L V G+ AG +L+ L L
Sbjct: 296 G--WFDEAPGWXEDRIA-RHQAIRDELLHVLRGXEGVFARTPQAGSYLFPRLPKLAV--- 349
Query: 379 YEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434
A +++ + + V+PG+ F R+ F + D A RI + +
Sbjct: 350 --APAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNF-SQDHEAAVAAARRIVTLV 402
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 62/159 (38%), Gaps = 19/159 (11%)
Query: 130 GAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAA 189
G+ TVA + DP V T G D + +VC+ N F +
Sbjct: 153 GSKPTVA--VQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLS----- 205
Query: 190 YEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE 249
KA+ ++I + +P+NP G R L ++V+F + LV D YA + +
Sbjct: 206 --KAKRTDI----IFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPD 259
Query: 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVG 288
+I EI D S SK GF G R+G
Sbjct: 260 CP-KTIYEIPGADEVAIETC-----SFSKYAGFTGVRLG 292
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 199 RIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEI 258
R + +P+NP G RE L +V F + +V D YA + + + SI EI
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAX--YXSDDNPRSIFEI 255
Query: 259 IDQDIACNRNLIHIVYSLSKDMGFPGFRVG 288
+ S SK GF G R+G
Sbjct: 256 PGAEEVAXETA-----SFSKYAGFTGVRLG 280
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 199 RIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEI 258
R + +P+NP G RE L +V F + +V D YA ++ + + SI EI
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYA--MYMSDDNPRSIFEI 255
Query: 259 IDQDIACNRNLIHIVYSLSKDMGFPGFRVG 288
+ + S SK GF G R+G
Sbjct: 256 PGAE-----EVAMETASFSKYAGFTGVRLG 280
>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|C Chain C, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|D Chain D, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
Length = 354
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 11/106 (10%)
Query: 183 MEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYA 242
+E L+AA +I V + NP+NP GT + ++ ++ N + DE YA
Sbjct: 129 IEGLKAAVAAYSGPSI----VYLVNPNNPTGTITPADVIEPWIAS-KPANTXFIVDEAYA 183
Query: 243 ATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVG 288
F + F SI+ I Q N+I ++ + SK G RVG
Sbjct: 184 E--FVNDPRFRSISPXITQGA---ENII-LLKTFSKIHAXAGXRVG 223
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 199 RIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEI 258
R + +P+NP G RE L +V F + +V D YA ++ + + SI EI
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYA--MYMSDDNPRSIFEI 255
Query: 259 IDQDIACNRNLIHIVYSLSKDMGFPGFRVG 288
+ + S S+ GF G R+G
Sbjct: 256 PGAE-----EVAMETASFSQYAGFTGVRLG 280
>pdb|3KGX|A Chain A, Crystal Structure Of Putative Aminotransferase
(Aah25799.1) From Mus Musculus At 1.80 A Resolution
pdb|3KGX|B Chain B, Crystal Structure Of Putative Aminotransferase
(Aah25799.1) From Mus Musculus At 1.80 A Resolution
pdb|3KGW|A Chain A, Crystal Structure Of Putative Aminotransferase
(Aah25799.1) From Mus Musculus At 1.65 A Resolution
pdb|3KGW|B Chain B, Crystal Structure Of Putative Aminotransferase
(Aah25799.1) From Mus Musculus At 1.65 A Resolution
Length = 393
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 116 TFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPT 150
T +P +V+SG A ET F L +PGD+FL T
Sbjct: 71 TRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGT 105
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 199 RIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEI 258
R + +P+NP G RE L +V F + +V D YA ++ + + SI EI
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYA--MYMSDDNPRSIFEI 255
Query: 259 IDQDIACNRNLIHIVYSLSKDMGFPGFRVG 288
+ + S S GF G R+G
Sbjct: 256 PGAE-----EVAMETASFSNYAGFTGVRLG 280
>pdb|4FI4|A Chain A, Crystal Structure Of Mannonate Dehydratase Prk15072
(Target Efi- 502214) From Caulobacter Sp. K31
pdb|4FI4|B Chain B, Crystal Structure Of Mannonate Dehydratase Prk15072
(Target Efi- 502214) From Caulobacter Sp. K31
pdb|4FI4|C Chain C, Crystal Structure Of Mannonate Dehydratase Prk15072
(Target Efi- 502214) From Caulobacter Sp. K31
Length = 425
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 59 CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYH 94
C +L+E+ L++ +A++ A G+ + IA F D H
Sbjct: 293 CKQLIEEQLIDYLRATVLHAGGITNLRKIAAFADLH 328
>pdb|1SVV|A Chain A, Initial Stuctural Analysis Of Leishmania Major Threonine
Aldolase
pdb|1SVV|B Chain B, Initial Stuctural Analysis Of Leishmania Major Threonine
Aldolase
Length = 359
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 164 TGVQLVPVVCDSSNDFKVTMEALEAA-YEKAQESNIRIKGVLITNPSNPLGTFLDRETLK 222
TG ++V C D K+ + +E+A +E E + K V I+N + +GT ++ L+
Sbjct: 112 TGHKVVTAPCP---DGKLRVADIESALHENRSEHXVIPKLVYISN-TTEVGTQYTKQELE 167
Query: 223 DIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEI 258
DI + E ++L D A+ + + +++A+I
Sbjct: 168 DISASCKEHGLYLFLDGARLASALSSPVNDLTLADI 203
>pdb|3H4M|A Chain A, Aaa Atpase Domain Of The Proteasome- Activating
Nucleotidase
pdb|3H4M|B Chain B, Aaa Atpase Domain Of The Proteasome- Activating
Nucleotidase
pdb|3H4M|C Chain C, Aaa Atpase Domain Of The Proteasome- Activating
Nucleotidase
Length = 285
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 50 QMGLAENLLCHELVE--DWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFM 107
+M LAE++ E+ + + + +IC+ G+N I +DY + +FR AV K M
Sbjct: 203 KMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMN---AIRELRDYVTMDDFRKAVEKIM 259
>pdb|4EMY|A Chain A, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|B Chain B, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|C Chain C, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|D Chain D, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548
Length = 413
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Query: 123 VMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVT 182
+ + G TGA + F D GD + Y+ + R + G ++DF
Sbjct: 105 IATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPY-RKICEEFGRNFKTFEF-FTDDFAFN 162
Query: 183 MEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFI 228
++ + A ++ + RI ++ + +NP G L E ++++F+
Sbjct: 163 IDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFL 208
>pdb|1Z3H|A Chain A, The Exportin Cse1 In Its Cargo-free, Cytoplasmic State
pdb|1Z3H|B Chain B, The Exportin Cse1 In Its Cargo-free, Cytoplasmic State
Length = 968
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 198 IRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA--TVFTKE 249
I I ++ NPSNP T E++ I+++ +N+ L+ D + TVF+++
Sbjct: 600 IEIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSED 653
>pdb|1WA5|C Chain C, Crystal Structure Of The Exportin Cse1p Complexed With Its
Cargo (Kap60p) And Rangtp
Length = 960
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 198 IRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA--TVFTKE 249
I I ++ NPSNP T E++ I+++ +N+ L+ D + TVF+++
Sbjct: 600 IEIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSED 653
>pdb|2AFB|A Chain A, Crystal Structure Of 2-Dehydro-3- Deoxygluconokinase (Ec
2.7.1.45) (Tm0067) From Thermotoga Maritima At 2.05 A
Resolution
pdb|2AFB|B Chain B, Crystal Structure Of 2-Dehydro-3- Deoxygluconokinase (Ec
2.7.1.45) (Tm0067) From Thermotoga Maritima At 2.05 A
Resolution
Length = 351
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 211 PLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS---FVSIAEIIDQDIACNR 267
PLG L L+D + NEK + + CD Y A ++TKE + + E +D IA
Sbjct: 150 PLGKELPL-ILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVXIPFXEYVDVLIANEE 208
Query: 268 NLIHIV 273
++ ++
Sbjct: 209 DIEKVL 214
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,442,570
Number of Sequences: 62578
Number of extensions: 599462
Number of successful extensions: 1549
Number of sequences better than 100.0: 98
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 1430
Number of HSP's gapped (non-prelim): 101
length of query: 483
length of database: 14,973,337
effective HSP length: 103
effective length of query: 380
effective length of database: 8,527,803
effective search space: 3240565140
effective search space used: 3240565140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)