Query 011570
Match_columns 483
No_of_seqs 260 out of 2706
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 02:50:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011570.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011570hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02376 1-aminocyclopropane-1 100.0 2.3E-74 5E-79 596.1 49.8 479 1-481 1-496 (496)
2 KOG0256 1-aminocyclopropane-1- 100.0 5.7E-72 1.2E-76 527.2 40.2 427 7-435 34-460 (471)
3 PLN02607 1-aminocyclopropane-1 100.0 1.7E-67 3.7E-72 539.2 46.6 441 1-442 2-443 (447)
4 PLN02450 1-aminocyclopropane-1 100.0 4.6E-63 1E-67 510.3 46.1 426 12-438 4-432 (468)
5 COG0436 Aspartate/tyrosine/aro 100.0 2.3E-59 5E-64 470.1 38.4 357 46-437 28-392 (393)
6 PRK07366 succinyldiaminopimela 100.0 9E-54 1.9E-58 434.2 36.4 354 45-434 29-388 (388)
7 PRK07681 aspartate aminotransf 100.0 5.1E-53 1.1E-57 430.0 37.8 350 45-432 31-384 (399)
8 PRK08636 aspartate aminotransf 100.0 3.8E-52 8.2E-57 424.0 41.1 364 45-437 32-401 (403)
9 PTZ00377 alanine aminotransfer 100.0 6.8E-52 1.5E-56 430.4 42.9 348 87-439 108-478 (481)
10 PRK06207 aspartate aminotransf 100.0 3.2E-52 6.9E-57 424.2 39.5 358 44-438 37-404 (405)
11 PRK06855 aminotransferase; Val 100.0 5.6E-52 1.2E-56 425.5 40.3 364 46-436 32-429 (433)
12 PRK08068 transaminase; Reviewe 100.0 3.4E-52 7.3E-57 422.7 36.5 351 46-433 32-386 (389)
13 COG1167 ARO8 Transcriptional r 100.0 4.7E-52 1E-56 426.3 36.4 397 2-438 48-457 (459)
14 PLN02231 alanine transaminase 100.0 4.2E-51 9.1E-56 425.0 43.9 349 87-439 161-530 (534)
15 PLN00175 aminotransferase fami 100.0 1.1E-51 2.3E-56 420.9 38.0 352 46-435 54-412 (413)
16 PRK09148 aminotransferase; Val 100.0 1.5E-51 3.3E-56 419.4 38.9 361 45-439 29-393 (405)
17 PRK09147 succinyldiaminopimela 100.0 1.5E-51 3.3E-56 418.9 38.8 354 45-435 28-395 (396)
18 PLN02187 rooty/superroot1 100.0 2.6E-51 5.6E-56 422.4 39.8 363 45-440 65-442 (462)
19 TIGR03540 DapC_direct LL-diami 100.0 1.4E-51 2.9E-56 417.7 37.1 350 46-432 29-382 (383)
20 PRK13355 bifunctional HTH-doma 100.0 2E-51 4.4E-56 430.3 39.4 331 87-437 178-515 (517)
21 PLN00143 tyrosine/nicotianamin 100.0 4.8E-51 1E-55 416.1 39.3 362 45-439 31-407 (409)
22 PRK09276 LL-diaminopimelate am 100.0 2.9E-51 6.4E-56 415.5 37.2 350 46-432 31-384 (385)
23 PRK06348 aspartate aminotransf 100.0 4.7E-51 1E-55 413.5 38.4 347 47-433 30-382 (384)
24 PRK15481 transcriptional regul 100.0 1.5E-51 3.3E-56 423.2 34.7 376 2-435 49-430 (431)
25 PRK07682 hypothetical protein; 100.0 3.2E-51 6.9E-56 414.2 35.2 353 46-437 20-377 (378)
26 PLN00145 tyrosine/nicotianamin 100.0 1.2E-50 2.6E-55 414.7 39.0 363 45-440 51-428 (430)
27 PLN02656 tyrosine transaminase 100.0 1.5E-50 3.2E-55 412.7 39.5 365 41-438 26-405 (409)
28 PRK05942 aspartate aminotransf 100.0 1E-50 2.3E-55 412.3 38.2 350 46-433 35-389 (394)
29 TIGR03538 DapC_gpp succinyldia 100.0 1.7E-50 3.6E-55 410.9 39.0 353 46-433 28-392 (393)
30 PRK06290 aspartate aminotransf 100.0 1.1E-50 2.4E-55 412.5 37.2 357 44-437 42-406 (410)
31 PTZ00433 tyrosine aminotransfe 100.0 1.9E-50 4.1E-55 412.5 39.0 364 44-438 31-410 (412)
32 PRK12414 putative aminotransfe 100.0 2.6E-50 5.6E-55 407.9 36.9 349 46-432 29-383 (384)
33 KOG0257 Kynurenine aminotransf 100.0 1E-51 2.2E-56 393.9 24.7 354 51-431 36-414 (420)
34 PRK07590 L,L-diaminopimelate a 100.0 1.4E-50 3.1E-55 413.1 34.7 350 45-433 33-408 (409)
35 PRK08960 hypothetical protein; 100.0 3.7E-50 8E-55 407.5 37.5 349 46-435 32-386 (387)
36 PRK08361 aspartate aminotransf 100.0 2.7E-50 5.8E-55 409.0 36.0 353 46-436 33-390 (391)
37 PRK07309 aromatic amino acid a 100.0 1.9E-49 4.1E-54 402.5 40.7 356 46-437 30-389 (391)
38 PRK06108 aspartate aminotransf 100.0 9.9E-50 2.1E-54 404.2 37.1 353 46-435 24-381 (382)
39 PRK06107 aspartate aminotransf 100.0 1.1E-49 2.3E-54 405.8 37.5 359 46-437 33-401 (402)
40 TIGR03537 DapC succinyldiamino 100.0 2.1E-49 4.6E-54 396.5 37.2 341 48-432 2-349 (350)
41 COG1168 MalY Bifunctional PLP- 100.0 3.1E-49 6.8E-54 373.3 35.4 356 46-437 25-387 (388)
42 PRK05839 hypothetical protein; 100.0 2.8E-49 6.1E-54 398.8 37.2 343 46-435 24-373 (374)
43 PRK07683 aminotransferase A; V 100.0 4.1E-49 9E-54 399.5 38.1 353 46-437 28-384 (387)
44 PRK08912 hypothetical protein; 100.0 3.4E-49 7.3E-54 400.6 36.8 354 47-436 27-386 (387)
45 PRK05957 aspartate aminotransf 100.0 6.9E-49 1.5E-53 398.1 38.7 352 47-437 28-386 (389)
46 PRK07337 aminotransferase; Val 100.0 4.5E-49 9.7E-54 399.8 37.0 353 46-434 30-387 (388)
47 TIGR01264 tyr_amTase_E tyrosin 100.0 5.4E-49 1.2E-53 400.8 37.7 357 46-436 31-399 (401)
48 PRK09082 methionine aminotrans 100.0 1.6E-49 3.4E-54 402.6 33.5 350 46-432 30-385 (386)
49 PRK07324 transaminase; Validat 100.0 1.2E-48 2.5E-53 393.9 37.1 344 44-437 24-371 (373)
50 PRK09265 aminotransferase AlaT 100.0 3.5E-48 7.6E-53 395.1 39.9 331 87-437 65-402 (404)
51 PRK08175 aminotransferase; Val 100.0 2.6E-48 5.7E-53 394.8 38.4 357 46-436 29-389 (395)
52 PRK07550 hypothetical protein; 100.0 4.9E-48 1.1E-52 391.9 37.9 351 46-433 29-384 (386)
53 COG0079 HisC Histidinol-phosph 100.0 2.6E-48 5.6E-53 383.5 34.5 330 47-436 23-354 (356)
54 PF00155 Aminotran_1_2: Aminot 100.0 6.4E-49 1.4E-53 395.5 30.6 358 47-430 2-363 (363)
55 PRK08363 alanine aminotransfer 100.0 5.5E-48 1.2E-52 393.0 37.3 356 45-437 29-395 (398)
56 PRK07568 aspartate aminotransf 100.0 9.6E-48 2.1E-52 391.5 39.0 354 46-439 30-395 (397)
57 TIGR01265 tyr_nico_aTase tyros 100.0 1E-47 2.3E-52 391.3 38.5 359 46-437 31-402 (403)
58 PRK09275 aspartate aminotransf 100.0 2.8E-48 6E-53 398.4 33.1 358 46-440 100-521 (527)
59 TIGR03542 DAPAT_plant LL-diami 100.0 4.1E-48 8.9E-53 394.2 34.2 349 45-433 32-401 (402)
60 PRK07777 aminotransferase; Val 100.0 1.3E-47 2.8E-52 389.0 37.4 352 47-434 25-384 (387)
61 KOG0259 Tyrosine aminotransfer 100.0 2.5E-47 5.3E-52 357.3 35.4 362 46-440 61-437 (447)
62 PRK06358 threonine-phosphate d 100.0 1E-47 2.2E-52 384.5 34.7 332 47-434 20-353 (354)
63 PRK05764 aspartate aminotransf 100.0 5.8E-47 1.3E-51 385.3 38.3 358 46-437 31-392 (393)
64 PLN02672 methionine S-methyltr 100.0 4.8E-47 1.1E-51 410.6 38.4 368 39-435 690-1079(1082)
65 PRK01533 histidinol-phosphate 100.0 7.9E-48 1.7E-52 386.3 30.1 328 46-438 29-357 (366)
66 PRK09257 aromatic amino acid a 100.0 3.9E-47 8.4E-52 386.4 35.2 344 47-433 27-395 (396)
67 PTZ00376 aspartate aminotransf 100.0 5.8E-47 1.3E-51 385.8 35.4 346 47-435 30-402 (404)
68 PRK14809 histidinol-phosphate 100.0 9.7E-47 2.1E-51 378.4 34.3 327 45-435 29-356 (357)
69 PRK06425 histidinol-phosphate 100.0 2.8E-46 6.1E-51 371.0 34.3 315 47-434 17-331 (332)
70 PRK07392 threonine-phosphate d 100.0 4.5E-46 9.7E-51 374.0 35.5 333 44-434 20-357 (360)
71 PRK08056 threonine-phosphate d 100.0 3.4E-46 7.4E-51 374.1 34.5 334 45-435 19-354 (356)
72 PLN02368 alanine transaminase 100.0 3.1E-46 6.7E-51 377.6 33.9 282 87-371 100-396 (407)
73 PRK02610 histidinol-phosphate 100.0 4.8E-46 1E-50 375.4 35.0 341 47-437 29-372 (374)
74 PRK07865 N-succinyldiaminopime 100.0 6.2E-46 1.3E-50 373.6 34.9 335 43-431 24-363 (364)
75 TIGR03801 asp_4_decarbox aspar 100.0 4.4E-46 9.6E-51 381.7 34.1 356 46-439 94-519 (521)
76 PLN03026 histidinol-phosphate 100.0 9E-46 2E-50 373.7 35.0 327 45-433 51-379 (380)
77 PRK05166 histidinol-phosphate 100.0 5.7E-46 1.2E-50 374.6 33.5 334 45-434 35-369 (371)
78 TIGR03539 DapC_actino succinyl 100.0 6.5E-46 1.4E-50 372.2 33.0 336 41-430 16-356 (357)
79 PRK09440 avtA valine--pyruvate 100.0 1.3E-45 2.7E-50 378.0 34.7 358 46-440 30-415 (416)
80 PRK04781 histidinol-phosphate 100.0 3E-45 6.4E-50 368.0 35.8 327 47-434 32-361 (364)
81 PRK08637 hypothetical protein; 100.0 7.9E-45 1.7E-49 368.3 39.1 328 86-437 36-387 (388)
82 PRK06836 aspartate aminotransf 100.0 7.3E-45 1.6E-49 369.3 38.3 344 46-437 33-392 (394)
83 PRK03158 histidinol-phosphate 100.0 1.3E-45 2.9E-50 370.7 31.0 328 47-433 30-358 (359)
84 PRK01688 histidinol-phosphate 100.0 8.4E-46 1.8E-50 370.3 29.1 320 47-430 29-350 (351)
85 PRK03317 histidinol-phosphate 100.0 8.6E-45 1.9E-49 365.8 33.8 338 47-437 27-365 (368)
86 PRK08153 histidinol-phosphate 100.0 7.4E-45 1.6E-49 365.9 32.9 333 47-438 33-367 (369)
87 PLN02397 aspartate transaminas 100.0 6.8E-44 1.5E-48 364.4 38.2 316 87-435 84-420 (423)
88 PRK04870 histidinol-phosphate 100.0 1.6E-44 3.6E-49 362.2 32.2 328 45-433 25-355 (356)
89 PRK07908 hypothetical protein; 100.0 3.5E-44 7.6E-49 358.8 33.7 324 46-435 22-346 (349)
90 PRK09105 putative aminotransfe 100.0 4E-44 8.6E-49 360.2 33.5 325 46-434 43-368 (370)
91 PRK05387 histidinol-phosphate 100.0 5.2E-44 1.1E-48 358.4 33.0 325 46-435 24-352 (353)
92 PRK06225 aspartate aminotransf 100.0 2.3E-43 5E-48 357.0 35.5 347 45-439 27-379 (380)
93 PRK02731 histidinol-phosphate 100.0 1.1E-43 2.4E-48 357.8 32.5 334 45-435 31-365 (367)
94 PRK06959 putative threonine-ph 100.0 7.9E-44 1.7E-48 353.9 30.5 314 45-439 23-336 (339)
95 PRK04635 histidinol-phosphate 100.0 1.3E-43 2.8E-48 355.2 30.4 320 46-433 31-352 (354)
96 PRK14807 histidinol-phosphate 100.0 3.2E-42 6.9E-47 344.7 35.8 325 48-434 24-350 (351)
97 PRK14808 histidinol-phosphate 100.0 2E-42 4.3E-47 343.4 33.0 317 44-433 17-334 (335)
98 PRK08354 putative aminotransfe 100.0 4.4E-42 9.5E-47 337.9 33.8 308 40-433 2-309 (311)
99 PRK03321 putative aminotransfe 100.0 1.7E-42 3.7E-47 347.2 30.9 335 39-435 15-350 (352)
100 PRK05664 threonine-phosphate d 100.0 4.3E-42 9.2E-47 340.7 32.4 309 46-436 20-328 (330)
101 PRK00950 histidinol-phosphate 100.0 4.1E-42 8.9E-47 345.7 32.1 326 45-434 33-360 (361)
102 PRK03967 histidinol-phosphate 100.0 8.3E-42 1.8E-46 339.6 31.5 316 47-437 19-335 (337)
103 KOG0634 Aromatic amino acid am 100.0 2E-41 4.4E-46 323.0 32.4 348 85-439 91-469 (472)
104 TIGR01141 hisC histidinol-phos 100.0 1.2E-41 2.7E-46 340.3 30.5 327 45-431 18-346 (346)
105 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1.8E-41 3.9E-46 336.3 30.9 313 45-430 16-329 (330)
106 KOG0258 Alanine aminotransfera 100.0 1E-36 2.2E-41 286.3 30.9 345 86-438 105-471 (475)
107 KOG0633 Histidinol phosphate a 100.0 9.7E-36 2.1E-40 265.8 20.9 305 90-433 66-374 (375)
108 cd00609 AAT_like Aspartate ami 100.0 1E-33 2.2E-38 282.9 36.9 318 87-431 29-349 (350)
109 PRK13238 tnaA tryptophanase/L- 100.0 2E-33 4.2E-38 287.9 30.9 319 88-437 72-434 (460)
110 COG3977 Alanine-alpha-ketoisov 100.0 1.4E-32 3E-37 250.3 26.5 324 85-438 65-413 (417)
111 TIGR03576 pyridox_MJ0158 pyrid 100.0 3.9E-31 8.5E-36 262.4 33.5 282 96-434 56-345 (346)
112 PRK10534 L-threonine aldolase; 100.0 3.9E-31 8.4E-36 263.0 27.9 324 48-435 1-332 (333)
113 cd00617 Tnase_like Tryptophana 100.0 2.2E-29 4.9E-34 254.5 32.8 321 88-439 47-411 (431)
114 PRK06939 2-amino-3-ketobutyrat 100.0 3.8E-29 8.3E-34 254.7 33.0 307 92-437 81-394 (397)
115 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 4.8E-29 1E-33 251.2 31.5 300 96-436 53-368 (370)
116 TIGR01822 2am3keto_CoA 2-amino 100.0 1E-28 2.2E-33 251.4 33.1 297 97-436 86-389 (393)
117 TIGR00858 bioF 8-amino-7-oxono 100.0 6.8E-29 1.5E-33 249.4 30.6 292 96-431 63-360 (360)
118 PLN02483 serine palmitoyltrans 100.0 2.8E-28 6.1E-33 252.5 33.5 309 88-437 140-467 (489)
119 TIGR01825 gly_Cac_T_rel pyrido 100.0 3.1E-28 6.8E-33 247.0 33.2 340 45-436 32-381 (385)
120 PLN02721 threonine aldolase 100.0 3.4E-28 7.3E-33 243.9 33.0 334 46-435 5-351 (353)
121 PF12897 Aminotran_MocR: Alani 100.0 3.9E-28 8.4E-33 230.7 30.1 328 85-440 59-419 (425)
122 PLN02822 serine palmitoyltrans 100.0 6.7E-28 1.5E-32 249.2 34.5 315 89-437 149-478 (481)
123 PRK10874 cysteine sulfinate de 100.0 6.8E-28 1.5E-32 245.8 31.0 295 96-437 65-399 (401)
124 cd06502 TA_like Low-specificit 100.0 8.2E-28 1.8E-32 239.6 30.3 300 89-432 27-337 (338)
125 TIGR03392 FeS_syn_CsdA cystein 100.0 1.3E-27 2.8E-32 243.5 31.5 296 96-437 62-396 (398)
126 cd00378 SHMT Serine-glycine hy 100.0 2.2E-27 4.8E-32 242.2 30.8 347 48-438 21-387 (402)
127 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 3.2E-27 6.9E-32 237.4 31.0 299 96-434 46-360 (361)
128 PRK13392 5-aminolevulinate syn 100.0 2.4E-27 5.2E-32 242.3 30.4 299 95-437 92-398 (410)
129 PRK05958 8-amino-7-oxononanoat 100.0 5.8E-27 1.2E-31 237.7 30.7 338 44-433 37-384 (385)
130 cd06454 KBL_like KBL_like; thi 100.0 1.5E-26 3.4E-31 231.4 31.3 295 96-433 48-348 (349)
131 cd06451 AGAT_like Alanine-glyo 100.0 4E-26 8.6E-31 229.1 31.2 294 97-435 35-356 (356)
132 PRK02948 cysteine desulfurase; 100.0 4.5E-27 9.8E-32 238.2 24.3 296 96-438 45-376 (381)
133 PRK07049 methionine gamma-lyas 100.0 1.1E-25 2.4E-30 229.3 34.1 226 88-355 78-314 (427)
134 PRK02627 acetylornithine amino 100.0 2.6E-26 5.6E-31 233.9 28.7 297 97-436 80-394 (396)
135 COG1448 TyrB Aspartate/tyrosin 100.0 9.8E-26 2.1E-30 214.0 29.7 347 39-433 20-395 (396)
136 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 3.4E-25 7.4E-30 222.2 30.8 293 96-433 33-354 (355)
137 TIGR01979 sufS cysteine desulf 99.9 2.5E-25 5.4E-30 227.1 30.3 293 95-436 63-401 (403)
138 TIGR00707 argD acetylornithine 99.9 2.1E-25 4.5E-30 225.9 29.2 274 120-434 85-379 (379)
139 PRK09295 bifunctional cysteine 99.9 2.4E-25 5.1E-30 227.4 29.6 292 96-435 69-403 (406)
140 PRK09064 5-aminolevulinate syn 99.9 3.3E-25 7.1E-30 226.5 30.5 301 93-437 90-398 (407)
141 PLN02855 Bifunctional selenocy 99.9 2.3E-25 4.9E-30 228.7 28.9 299 96-439 78-421 (424)
142 PRK07179 hypothetical protein; 99.9 2E-24 4.2E-29 220.6 35.2 295 95-438 100-400 (407)
143 TIGR01821 5aminolev_synth 5-am 99.9 8E-25 1.7E-29 223.2 32.1 298 95-436 91-396 (402)
144 PRK13479 2-aminoethylphosphona 99.9 1E-24 2.3E-29 219.8 31.9 301 96-438 39-365 (368)
145 cd06450 DOPA_deC_like DOPA dec 99.9 2.4E-25 5.1E-30 222.5 26.0 298 89-432 29-344 (345)
146 TIGR01976 am_tr_V_VC1184 cyste 99.9 4.6E-25 1E-29 224.7 28.4 289 96-430 62-397 (397)
147 TIGR02326 transamin_PhnW 2-ami 99.9 1.7E-24 3.7E-29 217.9 30.9 295 96-434 37-360 (363)
148 PLN02242 methionine gamma-lyas 99.9 9.2E-25 2E-29 221.7 29.0 218 96-360 78-304 (418)
149 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 2.2E-24 4.7E-29 218.5 30.8 307 94-437 63-382 (387)
150 PRK08247 cystathionine gamma-s 99.9 8E-25 1.7E-29 219.6 27.2 294 88-436 47-364 (366)
151 TIGR03403 nifS_epsilon cystein 99.9 2.2E-24 4.8E-29 218.5 30.7 306 89-438 35-377 (382)
152 PLN02409 serine--glyoxylate am 99.9 4.9E-24 1.1E-28 216.8 32.5 309 94-438 38-374 (401)
153 PRK03244 argD acetylornithine 99.9 1.6E-24 3.4E-29 220.8 27.8 297 89-438 81-396 (398)
154 cd00613 GDC-P Glycine cleavage 99.9 3.4E-24 7.3E-29 218.5 28.3 327 46-430 20-398 (398)
155 cd06453 SufS_like Cysteine des 99.9 2.4E-24 5.2E-29 217.6 26.6 288 96-430 45-373 (373)
156 cd00610 OAT_like Acetyl ornith 99.9 9E-24 2E-28 216.4 29.8 346 44-434 34-413 (413)
157 PRK00011 glyA serine hydroxyme 99.9 2.2E-23 4.7E-28 213.7 30.7 286 117-436 86-389 (416)
158 PRK13393 5-aminolevulinate syn 99.9 9.4E-23 2E-27 208.1 35.0 298 96-437 92-397 (406)
159 PRK01278 argD acetylornithine 99.9 1.9E-23 4.1E-28 212.2 28.8 295 98-436 73-388 (389)
160 TIGR03812 tyr_de_CO2_Arch tyro 99.9 8.5E-23 1.9E-27 206.3 33.3 290 97-432 62-372 (373)
161 PRK13520 L-tyrosine decarboxyl 99.9 3.8E-23 8.3E-28 208.7 30.4 298 96-435 57-370 (371)
162 TIGR03402 FeS_nifS cysteine de 99.9 2.8E-23 6.1E-28 210.2 28.8 294 96-438 44-374 (379)
163 TIGR02080 O_succ_thio_ly O-suc 99.9 6.4E-23 1.4E-27 206.4 30.6 218 87-353 45-268 (382)
164 TIGR01977 am_tr_V_EF2568 cyste 99.9 3.8E-23 8.3E-28 209.1 27.2 296 94-432 44-375 (376)
165 PRK06234 methionine gamma-lyas 99.9 1.6E-22 3.4E-27 205.1 31.5 211 93-353 63-284 (400)
166 PRK06460 hypothetical protein; 99.9 1.4E-22 3.1E-27 203.7 29.4 211 95-353 46-261 (376)
167 PLN03227 serine palmitoyltrans 99.9 8.5E-22 1.9E-26 199.3 34.5 315 89-437 38-383 (392)
168 PRK00451 glycine dehydrogenase 99.9 7.4E-23 1.6E-27 211.6 27.4 291 97-434 108-446 (447)
169 PRK08045 cystathionine gamma-s 99.9 3.6E-22 7.9E-27 201.0 31.6 218 87-353 46-269 (386)
170 PRK06767 methionine gamma-lyas 99.9 4E-22 8.7E-27 201.4 31.3 289 88-435 56-384 (386)
171 PRK08861 cystathionine gamma-s 99.9 8E-22 1.7E-26 198.0 32.3 217 88-353 48-270 (388)
172 PRK05093 argD bifunctional N-s 99.9 3.5E-22 7.7E-27 203.6 30.3 275 119-436 97-400 (403)
173 PRK08133 O-succinylhomoserine 99.9 4.5E-22 9.8E-27 201.1 30.1 210 96-355 63-280 (390)
174 PRK02936 argD acetylornithine 99.9 5.1E-22 1.1E-26 200.9 30.0 295 95-434 68-377 (377)
175 PRK08776 cystathionine gamma-s 99.9 2.2E-21 4.9E-26 196.4 33.3 209 96-353 62-277 (405)
176 PRK08249 cystathionine gamma-s 99.9 1.5E-21 3.1E-26 197.5 31.3 208 96-353 66-280 (398)
177 TIGR01437 selA_rel uncharacter 99.9 6.3E-22 1.4E-26 198.4 28.1 283 95-433 42-362 (363)
178 PRK07504 O-succinylhomoserine 99.9 1E-21 2.3E-26 198.8 29.4 217 88-353 60-282 (398)
179 PRK14012 cysteine desulfurase; 99.9 6.7E-22 1.4E-26 201.8 27.7 294 96-439 51-382 (404)
180 cd00614 CGS_like CGS_like: Cys 99.9 2.2E-21 4.7E-26 195.3 30.6 211 95-354 41-258 (369)
181 PRK07582 cystathionine gamma-l 99.9 3E-21 6.6E-26 193.5 31.2 214 87-353 45-264 (366)
182 COG0520 csdA Selenocysteine ly 99.9 2.3E-21 4.9E-26 195.0 30.2 293 96-435 68-404 (405)
183 TIGR02006 IscS cysteine desulf 99.9 1.7E-21 3.7E-26 198.5 29.1 293 96-439 49-380 (402)
184 COG0156 BioF 7-keto-8-aminopel 99.9 4.9E-21 1.1E-25 189.0 30.1 302 90-433 80-387 (388)
185 TIGR01328 met_gam_lyase methio 99.9 7.5E-21 1.6E-25 192.1 31.8 215 88-353 54-277 (391)
186 PRK07811 cystathionine gamma-s 99.9 7E-21 1.5E-25 192.3 31.5 212 94-353 61-278 (388)
187 PRK07503 methionine gamma-lyas 99.9 5.8E-21 1.3E-25 193.7 30.9 214 89-353 61-283 (403)
188 PLN02994 1-aminocyclopropane-1 99.9 2.2E-23 4.8E-28 180.4 11.0 148 8-155 5-153 (153)
189 PRK04073 rocD ornithine--oxo-a 99.9 2.5E-21 5.5E-26 196.8 27.9 269 119-434 97-395 (396)
190 TIGR00713 hemL glutamate-1-sem 99.9 1.9E-21 4E-26 199.7 27.1 309 92-436 86-422 (423)
191 PRK07810 O-succinylhomoserine 99.9 5.1E-21 1.1E-25 193.8 29.3 216 88-353 65-287 (403)
192 PRK07050 cystathionine beta-ly 99.9 6E-21 1.3E-25 192.9 29.4 215 89-353 61-282 (394)
193 PRK07505 hypothetical protein; 99.9 9.9E-21 2.1E-25 193.0 30.9 293 96-436 93-399 (402)
194 TIGR01325 O_suc_HS_sulf O-succ 99.9 8.1E-21 1.7E-25 191.5 29.7 215 88-353 49-270 (380)
195 PRK08088 4-aminobutyrate amino 99.9 1.2E-20 2.7E-25 193.3 30.6 312 99-437 85-424 (425)
196 TIGR02379 ECA_wecE TDP-4-keto- 99.9 1.1E-20 2.4E-25 189.9 27.3 174 96-306 29-208 (376)
197 PRK12381 bifunctional succinyl 99.9 3.6E-20 7.9E-25 188.8 31.3 287 119-441 96-404 (406)
198 PRK08574 cystathionine gamma-s 99.9 3.9E-20 8.3E-25 186.4 31.1 211 95-353 54-269 (385)
199 TIGR03235 DNA_S_dndA cysteine 99.9 2E-21 4.4E-26 194.8 21.3 281 96-425 44-347 (353)
200 PRK08064 cystathionine beta-ly 99.9 3.4E-20 7.3E-25 187.5 29.9 210 96-353 56-270 (390)
201 PRK05968 hypothetical protein; 99.9 4.8E-20 1E-24 186.3 29.8 281 96-437 65-387 (389)
202 PRK04260 acetylornithine amino 99.9 3.5E-20 7.7E-25 187.2 28.1 289 96-433 68-374 (375)
203 PLN02955 8-amino-7-oxononanoat 99.9 1.1E-19 2.3E-24 183.6 31.1 291 96-437 149-462 (476)
204 PRK07269 cystathionine gamma-s 99.9 3.3E-20 7.2E-25 185.4 27.0 294 88-435 49-363 (364)
205 PRK05937 8-amino-7-oxononanoat 99.9 1.1E-19 2.4E-24 183.2 30.8 291 95-438 57-352 (370)
206 PRK09028 cystathionine beta-ly 99.9 1.6E-19 3.4E-24 181.2 31.0 215 89-353 54-277 (394)
207 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 1.4E-19 3.1E-24 184.5 29.9 164 88-294 52-219 (418)
208 PRK00854 rocD ornithine--oxo-a 99.9 5E-20 1.1E-24 187.9 26.6 286 96-435 85-400 (401)
209 PTZ00125 ornithine aminotransf 99.9 2E-19 4.3E-24 183.5 30.0 285 120-438 89-397 (400)
210 cd00615 Orn_deC_like Ornithine 99.9 1.5E-20 3.2E-25 183.4 19.9 166 96-291 61-231 (294)
211 COG1104 NifS Cysteine sulfinat 99.9 1.5E-19 3.3E-24 175.5 26.3 299 96-440 46-381 (386)
212 PRK08248 O-acetylhomoserine am 99.9 7.2E-19 1.6E-23 179.3 31.7 156 96-293 66-225 (431)
213 PRK04366 glycine dehydrogenase 99.9 4.6E-19 1E-23 183.8 30.7 318 87-441 99-453 (481)
214 PLN02651 cysteine desulfurase 99.9 5.7E-20 1.2E-24 185.0 23.1 281 96-424 45-364 (364)
215 PRK07671 cystathionine beta-ly 99.9 7.4E-19 1.6E-23 176.8 30.6 208 96-353 52-266 (377)
216 TIGR01329 cysta_beta_ly_E cyst 99.9 7.8E-19 1.7E-23 176.8 30.7 289 89-437 40-376 (378)
217 PLN00144 acetylornithine trans 99.9 3.1E-19 6.8E-24 180.0 26.8 296 97-436 56-380 (382)
218 TIGR01324 cysta_beta_ly_B cyst 99.8 1.3E-18 2.8E-23 174.6 30.6 208 97-353 53-266 (377)
219 PRK06702 O-acetylhomoserine am 99.8 7.1E-19 1.5E-23 178.0 28.9 210 96-353 63-310 (432)
220 PRK06084 O-acetylhomoserine am 99.8 2.1E-18 4.5E-23 175.7 32.0 157 96-293 60-219 (425)
221 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 5.7E-19 1.2E-23 178.1 27.4 175 95-305 28-206 (375)
222 PRK05939 hypothetical protein; 99.8 2.2E-18 4.7E-23 174.2 31.5 162 89-293 40-207 (397)
223 cd00616 AHBA_syn 3-amino-5-hyd 99.8 6.9E-19 1.5E-23 176.3 27.4 288 94-431 18-352 (352)
224 PLN02509 cystathionine beta-ly 99.8 1.8E-18 3.8E-23 176.7 30.2 218 88-353 125-349 (464)
225 TIGR03246 arg_catab_astC succi 99.8 2.2E-18 4.7E-23 175.2 30.0 275 119-436 92-395 (397)
226 TIGR02618 tyr_phenol_ly tyrosi 99.8 3.1E-18 6.7E-23 170.8 29.6 324 89-439 66-429 (450)
227 PRK06176 cystathionine gamma-s 99.8 5.6E-18 1.2E-22 170.5 31.2 208 96-353 52-266 (380)
228 PRK11658 UDP-4-amino-4-deoxy-L 99.8 2.4E-18 5.2E-23 173.7 28.0 172 95-305 34-207 (379)
229 TIGR00700 GABAtrnsam 4-aminobu 99.8 5.2E-18 1.1E-22 173.5 30.3 310 99-435 77-419 (420)
230 PRK13034 serine hydroxymethylt 99.8 6.1E-18 1.3E-22 172.5 30.0 344 47-437 29-393 (416)
231 PRK05967 cystathionine beta-ly 99.8 1E-17 2.2E-22 167.9 30.3 212 96-353 62-280 (395)
232 PRK06918 4-aminobutyrate amino 99.8 1.6E-17 3.4E-22 171.3 32.7 314 97-438 96-445 (451)
233 PRK08360 4-aminobutyrate amino 99.8 5.2E-17 1.1E-21 166.5 34.2 316 97-442 83-432 (443)
234 PRK13580 serine hydroxymethylt 99.8 1.5E-17 3.3E-22 168.2 29.6 350 46-437 49-446 (493)
235 PRK09792 4-aminobutyrate trans 99.8 4.7E-17 1E-21 166.3 33.6 310 97-435 82-420 (421)
236 PF00266 Aminotran_5: Aminotra 99.8 9.7E-18 2.1E-22 169.3 27.5 284 96-426 45-371 (371)
237 PTZ00094 serine hydroxymethylt 99.8 4.7E-17 1E-21 168.0 30.3 310 100-451 86-424 (452)
238 TIGR03588 PseC UDP-4-keto-6-de 99.8 4E-17 8.6E-22 165.3 29.3 295 94-434 29-380 (380)
239 PRK13237 tyrosine phenol-lyase 99.8 9.1E-17 2E-21 160.7 31.2 325 89-439 73-436 (460)
240 COG2008 GLY1 Threonine aldolas 99.8 3.4E-17 7.4E-22 155.8 26.1 302 95-434 32-341 (342)
241 KOG1412 Aspartate aminotransfe 99.8 9.7E-17 2.1E-21 147.8 27.9 316 88-438 68-407 (410)
242 TIGR01885 Orn_aminotrans ornit 99.8 6.2E-17 1.3E-21 165.0 29.9 290 96-434 81-400 (401)
243 PF04864 Alliinase_C: Allinase 99.8 2.5E-18 5.4E-23 162.0 17.7 288 96-433 45-362 (363)
244 PLN02624 ornithine-delta-amino 99.8 7.6E-17 1.6E-21 166.9 30.4 287 119-438 132-446 (474)
245 PRK04612 argD acetylornithine 99.8 1.1E-16 2.4E-21 162.5 30.1 301 97-438 81-405 (408)
246 TIGR03531 selenium_SpcS O-phos 99.8 1.2E-16 2.6E-21 161.7 29.6 309 96-433 103-443 (444)
247 TIGR01814 kynureninase kynuren 99.8 3.7E-17 8.1E-22 166.9 26.4 275 117-434 84-405 (406)
248 PRK05994 O-acetylhomoserine am 99.8 2.4E-16 5.3E-21 161.0 31.6 155 96-292 65-223 (427)
249 PRK00062 glutamate-1-semialdeh 99.8 5.3E-17 1.1E-21 166.3 26.5 291 119-437 106-425 (426)
250 PRK06777 4-aminobutyrate amino 99.8 5.8E-16 1.3E-20 158.2 33.0 310 98-435 83-420 (421)
251 PRK07495 4-aminobutyrate amino 99.8 7.6E-16 1.6E-20 157.2 33.3 312 98-438 83-423 (425)
252 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 7E-16 1.5E-20 154.2 32.0 287 88-435 47-386 (386)
253 PRK08134 O-acetylhomoserine am 99.8 3.2E-16 7E-21 159.8 29.7 156 96-292 66-224 (433)
254 KOG1411 Aspartate aminotransfe 99.8 2.6E-17 5.7E-22 153.6 19.1 349 39-434 46-423 (427)
255 PRK07812 O-acetylhomoserine am 99.8 5.8E-16 1.2E-20 157.8 29.9 157 96-292 71-230 (436)
256 KOG1549 Cysteine desulfurase N 99.8 1.4E-16 3.1E-21 155.3 22.9 165 95-294 86-257 (428)
257 COG0075 Serine-pyruvate aminot 99.8 2.3E-15 5.1E-20 147.5 31.3 303 97-439 37-366 (383)
258 KOG1359 Glycine C-acetyltransf 99.8 6.5E-17 1.4E-21 147.8 18.6 298 86-438 106-414 (417)
259 PRK08117 4-aminobutyrate amino 99.8 2.1E-15 4.4E-20 155.1 31.5 295 119-437 103-430 (433)
260 TIGR02407 ectoine_ectB diamino 99.7 2.9E-15 6.2E-20 152.7 31.4 309 97-435 77-411 (412)
261 KOG1368 Threonine aldolase [Am 99.7 1.7E-15 3.7E-20 139.0 26.3 333 48-434 23-366 (384)
262 cd01494 AAT_I Aspartate aminot 99.7 6E-17 1.3E-21 144.1 16.5 167 96-292 2-169 (170)
263 PRK06058 4-aminobutyrate amino 99.7 1E-14 2.2E-19 150.1 33.4 311 96-436 97-442 (443)
264 PLN03226 serine hydroxymethylt 99.7 3.8E-15 8.3E-20 153.4 30.0 348 47-437 35-420 (475)
265 PRK09264 diaminobutyrate--2-ox 99.7 1.1E-14 2.3E-19 149.2 32.3 295 121-443 104-423 (425)
266 PRK08114 cystathionine beta-ly 99.7 8.6E-15 1.9E-19 146.7 30.6 207 97-353 65-280 (395)
267 PRK15407 lipopolysaccharide bi 99.7 3.1E-15 6.6E-20 153.1 27.4 172 96-307 65-248 (438)
268 PRK02769 histidine decarboxyla 99.7 6.6E-15 1.4E-19 147.7 28.7 296 96-442 63-378 (380)
269 COG4992 ArgD Ornithine/acetylo 99.7 4.8E-15 1E-19 144.0 26.5 297 97-438 83-400 (404)
270 PLN02724 Molybdenum cofactor s 99.7 2.3E-15 5E-20 165.2 27.4 310 96-437 80-489 (805)
271 PLN02880 tyrosine decarboxylas 99.7 1.7E-14 3.6E-19 149.4 32.0 328 90-438 114-486 (490)
272 PLN02590 probable tyrosine dec 99.7 4.4E-14 9.5E-19 146.5 34.0 331 89-440 161-536 (539)
273 PLN02271 serine hydroxymethylt 99.7 3.1E-14 6.7E-19 144.8 31.0 309 90-436 186-540 (586)
274 PLN02414 glycine dehydrogenase 99.7 9E-15 1.9E-19 159.9 29.1 319 85-439 552-910 (993)
275 COG0626 MetC Cystathionine bet 99.7 9.9E-14 2.1E-18 137.2 32.6 218 96-360 65-291 (396)
276 COG1103 Archaea-specific pyrid 99.7 1.5E-14 3.2E-19 131.1 24.3 303 96-437 63-381 (382)
277 COG0112 GlyA Glycine/serine hy 99.7 1.3E-14 2.8E-19 139.0 24.9 350 47-438 27-392 (413)
278 COG0399 WecE Predicted pyridox 99.7 1.9E-14 4.1E-19 141.4 26.2 173 96-308 36-212 (374)
279 KOG1360 5-aminolevulinate synt 99.7 9.3E-15 2E-19 139.0 23.1 298 96-438 218-526 (570)
280 PRK05613 O-acetylhomoserine am 99.7 6.9E-14 1.5E-18 142.6 30.7 156 96-292 71-230 (437)
281 PRK05964 adenosylmethionine--8 99.7 7.6E-14 1.6E-18 143.1 30.4 305 97-436 84-422 (423)
282 PRK06434 cystathionine gamma-l 99.7 1.1E-13 2.5E-18 138.7 30.7 206 96-353 66-278 (384)
283 COG0160 GabT 4-aminobutyrate a 99.7 1.5E-13 3.2E-18 137.6 30.8 315 98-437 99-446 (447)
284 PRK03715 argD acetylornithine 99.7 1.2E-13 2.5E-18 140.1 30.1 298 96-437 76-394 (395)
285 PF00464 SHMT: Serine hydroxym 99.7 2.8E-14 6.1E-19 141.6 24.6 337 47-427 21-396 (399)
286 PRK08593 4-aminobutyrate amino 99.7 5.9E-13 1.3E-17 136.8 35.0 314 97-440 84-433 (445)
287 TIGR00709 dat 2,4-diaminobutyr 99.7 2.2E-13 4.8E-18 140.1 31.8 317 97-439 81-438 (442)
288 COG0001 HemL Glutamate-1-semia 99.7 1E-13 2.3E-18 136.2 27.5 336 44-438 51-430 (432)
289 PRK03080 phosphoserine aminotr 99.7 5.2E-14 1.1E-18 142.2 26.0 287 96-439 50-376 (378)
290 PRK06541 hypothetical protein; 99.6 2.4E-13 5.2E-18 140.1 30.8 309 98-437 95-456 (460)
291 PRK05769 4-aminobutyrate amino 99.6 6.5E-13 1.4E-17 136.4 32.9 311 97-436 96-439 (441)
292 TIGR01788 Glu-decarb-GAD gluta 99.6 1.8E-13 3.9E-18 139.3 28.2 313 96-437 78-430 (431)
293 TIGR03372 putres_am_tran putre 99.6 3.8E-13 8.3E-18 137.4 30.3 305 97-434 116-442 (442)
294 PLN03032 serine decarboxylase; 99.6 2.4E-13 5.1E-18 135.5 28.0 286 96-432 64-372 (374)
295 PRK11522 putrescine--2-oxoglut 99.6 4.9E-13 1.1E-17 137.5 31.2 309 97-439 123-454 (459)
296 PRK15029 arginine decarboxylas 99.6 1.4E-13 2.9E-18 146.9 27.6 178 96-292 207-399 (755)
297 TIGR02617 tnaA_trp_ase tryptop 99.6 4.5E-13 9.7E-18 132.7 29.3 351 47-439 42-444 (467)
298 TIGR01364 serC_1 phosphoserine 99.6 1.4E-13 3E-18 137.0 25.9 285 98-436 37-348 (349)
299 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 4.6E-15 9.9E-20 147.8 15.0 178 96-295 68-256 (417)
300 cd00611 PSAT_like Phosphoserin 99.6 5E-14 1.1E-18 141.1 22.7 281 96-433 46-353 (355)
301 KOG0053 Cystathionine beta-lya 99.6 5.6E-13 1.2E-17 130.2 28.9 177 97-314 80-262 (409)
302 PRK05639 4-aminobutyrate amino 99.6 2E-12 4.3E-17 133.1 34.7 315 98-439 96-446 (457)
303 PRK07678 aminotransferase; Val 99.6 2.4E-12 5.2E-17 132.6 31.9 314 99-437 90-450 (451)
304 PF01041 DegT_DnrJ_EryC1: DegT 99.6 1.9E-13 4.1E-18 137.4 23.0 284 96-431 27-363 (363)
305 TIGR03799 NOD_PanD_pyr putativ 99.6 2.5E-12 5.3E-17 133.7 29.6 319 90-429 121-518 (522)
306 PF01212 Beta_elim_lyase: Beta 99.6 5.6E-15 1.2E-19 142.3 8.7 245 89-361 24-278 (290)
307 PRK05355 3-phosphoserine/phosp 99.6 5.4E-13 1.2E-17 133.5 22.7 268 120-437 67-359 (360)
308 PRK13578 ornithine decarboxyla 99.6 1.3E-12 2.7E-17 138.2 26.1 174 96-292 176-368 (720)
309 KOG1357 Serine palmitoyltransf 99.6 9.8E-14 2.1E-18 134.3 16.1 299 94-433 182-499 (519)
310 PRK04311 selenocysteine syntha 99.6 4.3E-12 9.4E-17 130.0 29.2 295 97-435 130-463 (464)
311 PRK05965 hypothetical protein; 99.6 1.1E-11 2.5E-16 127.8 31.9 307 98-438 90-449 (459)
312 PRK15400 lysine decarboxylase 99.6 1.2E-12 2.6E-17 138.2 25.0 167 96-288 197-375 (714)
313 PLN02760 4-aminobutyrate:pyruv 99.5 7.6E-12 1.6E-16 130.0 30.5 310 97-437 132-492 (504)
314 PRK06943 adenosylmethionine--8 99.5 2.5E-11 5.4E-16 124.9 33.2 302 98-437 97-447 (453)
315 COG2873 MET17 O-acetylhomoseri 99.5 3.6E-12 7.8E-17 121.2 24.6 296 96-436 64-425 (426)
316 PRK07482 hypothetical protein; 99.5 1.6E-11 3.4E-16 126.9 31.3 311 97-437 93-455 (461)
317 PLN02482 glutamate-1-semialdeh 99.5 2.1E-11 4.5E-16 125.7 30.9 303 97-436 138-473 (474)
318 PRK13360 omega amino acid--pyr 99.5 4.2E-11 9.1E-16 123.0 33.0 307 97-436 88-440 (442)
319 PLN02263 serine decarboxylase 99.5 1.7E-11 3.7E-16 124.2 28.3 292 95-437 130-444 (470)
320 PRK12389 glutamate-1-semialdeh 99.5 4.8E-11 1E-15 122.4 32.0 300 98-436 93-427 (428)
321 PRK07483 hypothetical protein; 99.5 4.3E-11 9.4E-16 122.9 31.7 312 97-438 72-439 (443)
322 PRK15399 lysine decarboxylase 99.5 9.9E-12 2.1E-16 131.3 27.1 172 96-292 197-380 (713)
323 PRK06917 hypothetical protein; 99.5 7.4E-11 1.6E-15 121.4 33.1 316 97-437 73-438 (447)
324 TIGR01366 serC_3 phosphoserine 99.5 5.5E-12 1.2E-16 126.4 24.2 283 96-436 43-360 (361)
325 PRK06062 hypothetical protein; 99.5 4.2E-11 9E-16 123.3 31.2 310 97-438 94-447 (451)
326 PRK07986 adenosylmethionine--8 99.5 3E-11 6.5E-16 123.3 29.5 301 97-437 85-424 (428)
327 PRK09221 beta alanine--pyruvat 99.5 6.4E-11 1.4E-15 121.7 32.1 306 98-436 92-443 (445)
328 PRK12403 putative aminotransfe 99.5 6.7E-11 1.5E-15 122.1 32.2 311 97-439 97-455 (460)
329 PRK06173 adenosylmethionine--8 99.5 3.2E-11 7E-16 123.3 29.3 301 98-437 87-426 (429)
330 PRK06149 hypothetical protein; 99.5 8.8E-11 1.9E-15 131.6 35.2 311 99-436 625-970 (972)
331 PRK06148 hypothetical protein; 99.5 5.6E-11 1.2E-15 133.3 33.4 312 97-437 662-1011(1013)
332 KOG2862 Alanine-glyoxylate ami 99.5 9E-11 2E-15 108.9 28.8 283 119-438 68-384 (385)
333 PRK08742 adenosylmethionine--8 99.5 9.5E-11 2.1E-15 121.0 32.6 311 98-437 107-468 (472)
334 PRK05367 glycine dehydrogenase 99.5 3.2E-11 6.9E-16 132.9 30.5 310 94-439 538-878 (954)
335 PRK06082 4-aminobutyrate amino 99.5 7.9E-11 1.7E-15 121.5 31.7 308 97-437 112-452 (459)
336 PRK06105 aminotransferase; Pro 99.5 6.7E-11 1.5E-15 122.1 31.0 310 97-438 91-451 (460)
337 PRK00615 glutamate-1-semialdeh 99.5 5.9E-11 1.3E-15 121.3 30.3 306 98-437 93-429 (433)
338 PRK06916 adenosylmethionine--8 99.5 1.2E-10 2.6E-15 120.3 32.6 308 98-438 99-457 (460)
339 PRK07036 hypothetical protein; 99.5 1.3E-10 2.8E-15 120.2 32.8 321 97-451 94-464 (466)
340 PRK07046 aminotransferase; Val 99.5 6.3E-11 1.4E-15 121.9 29.9 301 97-437 114-451 (453)
341 PRK07030 adenosylmethionine--8 99.5 1.4E-10 3E-15 119.9 32.2 308 97-437 89-447 (466)
342 PRK07481 hypothetical protein; 99.5 1.5E-10 3.2E-15 119.3 32.2 312 97-437 85-446 (449)
343 PRK04013 argD acetylornithine/ 99.5 3.4E-11 7.4E-16 120.2 26.5 265 119-437 81-361 (364)
344 PRK12566 glycine dehydrogenase 99.5 2.2E-11 4.9E-16 131.2 25.8 317 85-437 527-877 (954)
345 PRK05630 adenosylmethionine--8 99.5 1.2E-10 2.6E-15 118.9 30.2 294 98-436 83-420 (422)
346 PRK06938 diaminobutyrate--2-ox 99.5 1.8E-10 3.9E-15 118.9 31.6 293 121-437 128-461 (464)
347 TIGR00461 gcvP glycine dehydro 99.5 8E-11 1.7E-15 127.8 30.1 308 94-439 526-870 (939)
348 COG0076 GadB Glutamate decarbo 99.4 2.1E-11 4.6E-16 124.5 24.0 251 95-372 98-381 (460)
349 PRK07480 putative aminotransfe 99.4 1.2E-10 2.6E-15 120.1 29.2 311 97-439 93-451 (456)
350 TIGR00474 selA seryl-tRNA(sec) 99.4 1.8E-10 4E-15 117.7 28.4 291 96-430 124-453 (454)
351 TIGR00508 bioA adenosylmethion 99.4 1.2E-10 2.5E-15 119.4 26.9 282 119-436 105-426 (427)
352 PRK06931 diaminobutyrate--2-ox 99.4 6E-10 1.3E-14 115.0 32.2 317 97-439 100-457 (459)
353 PRK08297 L-lysine aminotransfe 99.3 1.6E-09 3.5E-14 111.4 29.4 280 119-437 110-442 (443)
354 PF00282 Pyridoxal_deC: Pyrido 99.3 6.5E-10 1.4E-14 111.5 25.0 264 90-369 71-371 (373)
355 COG1982 LdcC Arginine/lysine/o 99.3 4.7E-10 1E-14 114.2 23.2 169 96-293 72-246 (557)
356 PRK06209 glutamate-1-semialdeh 99.3 1E-09 2.2E-14 112.7 25.9 274 119-438 104-407 (431)
357 COG3033 TnaA Tryptophanase [Am 99.3 2.3E-09 5E-14 101.5 25.1 326 88-437 73-445 (471)
358 TIGR01365 serC_2 phosphoserine 99.3 1.2E-09 2.6E-14 109.1 24.9 297 96-434 37-371 (374)
359 TIGR00699 GABAtrns_euk 4-amino 99.3 1.8E-09 3.8E-14 110.9 26.0 280 119-434 122-464 (464)
360 PLN02414 glycine dehydrogenase 99.3 1.6E-09 3.4E-14 119.2 26.4 274 98-432 152-465 (993)
361 TIGR03251 LAT_fam L-lysine 6-t 99.2 2.2E-08 4.7E-13 102.9 30.9 277 119-432 103-430 (431)
362 PRK05367 glycine dehydrogenase 99.2 6.3E-09 1.4E-13 115.0 28.5 261 117-431 136-437 (954)
363 COG0161 BioA Adenosylmethionin 99.2 6.9E-09 1.5E-13 103.7 25.3 290 119-439 105-446 (449)
364 TIGR03811 tyr_de_CO2_Ent tyros 99.2 7.2E-08 1.6E-12 101.5 33.8 148 90-244 115-325 (608)
365 PLN02974 adenosylmethionine-8- 99.2 3.2E-08 6.8E-13 107.7 31.1 230 184-434 567-816 (817)
366 PLN02452 phosphoserine transam 99.2 1.7E-08 3.7E-13 100.8 26.0 288 96-436 50-363 (365)
367 KOG1404 Alanine-glyoxylate ami 99.1 4.7E-08 1E-12 94.0 25.2 306 88-430 87-432 (442)
368 KOG1358 Serine palmitoyltransf 99.1 3.7E-09 8.1E-14 101.2 17.7 312 89-435 134-464 (467)
369 PF06838 Met_gamma_lyase: Meth 99.1 4.7E-08 1E-12 93.8 22.4 233 126-392 79-333 (403)
370 KOG1401 Acetylornithine aminot 99.0 1.9E-07 4.1E-12 90.5 25.7 301 97-438 101-432 (433)
371 PF00202 Aminotran_3: Aminotra 99.0 1.3E-08 2.8E-13 101.2 17.6 210 95-323 56-291 (339)
372 COG1003 GcvP Glycine cleavage 99.0 3.9E-07 8.4E-12 89.0 24.7 317 85-440 93-451 (496)
373 KOG1402 Ornithine aminotransfe 98.9 2.4E-07 5.1E-12 87.2 21.2 294 96-435 99-426 (427)
374 PRK12462 phosphoserine aminotr 98.9 1.7E-06 3.7E-11 85.8 27.2 330 48-436 5-362 (364)
375 KOG1403 Predicted alanine-glyo 98.9 5.3E-07 1.1E-11 83.7 20.9 294 119-438 102-439 (452)
376 COG3844 Kynureninase [Amino ac 98.8 1.7E-06 3.6E-11 81.6 21.8 271 117-437 91-403 (407)
377 TIGR00461 gcvP glycine dehydro 98.7 7.6E-06 1.7E-10 89.6 26.3 273 102-431 113-426 (939)
378 PF05889 SLA_LP_auto_ag: Solub 98.6 1.5E-05 3.2E-10 78.3 22.8 299 119-435 74-389 (389)
379 KOG0629 Glutamate decarboxylas 98.6 3E-05 6.5E-10 75.7 23.7 316 95-433 138-506 (510)
380 PF02347 GDC-P: Glycine cleava 98.6 1.6E-05 3.4E-10 80.0 22.4 279 95-430 107-429 (429)
381 KOG2467 Glycine/serine hydroxy 98.6 5E-05 1.1E-09 72.8 24.1 285 117-436 101-426 (477)
382 KOG0628 Aromatic-L-amino-acid/ 98.6 5E-05 1.1E-09 75.0 24.8 319 93-440 108-475 (511)
383 COG1921 SelA Selenocysteine sy 98.5 2.2E-05 4.7E-10 77.2 22.3 177 118-322 82-266 (395)
384 COG4100 Cystathionine beta-lya 98.5 8.7E-06 1.9E-10 75.8 16.9 175 94-299 65-254 (416)
385 KOG1383 Glutamate decarboxylas 98.5 5.8E-05 1.3E-09 74.7 23.2 326 94-460 116-470 (491)
386 KOG1405 4-aminobutyrate aminot 98.3 4.8E-05 1E-09 72.6 17.0 217 182-435 254-482 (484)
387 COG0403 GcvP Glycine cleavage 98.3 0.0014 3E-08 64.7 26.5 271 117-433 135-447 (450)
388 PF03841 SelA: L-seryl-tRNA se 97.9 8.7E-06 1.9E-10 79.3 4.6 212 118-352 61-295 (367)
389 PRK12566 glycine dehydrogenase 97.8 0.0051 1.1E-07 67.7 23.9 259 118-431 140-439 (954)
390 KOG2040 Glycine dehydrogenase 97.6 0.03 6.5E-07 58.0 23.8 316 85-438 566-920 (1001)
391 KOG3843 Predicted serine hydro 97.3 0.015 3.2E-07 53.8 15.8 301 118-440 75-406 (432)
392 COG1932 SerC Phosphoserine ami 97.2 0.07 1.5E-06 52.0 20.4 329 48-436 6-363 (365)
393 PLN02672 methionine S-methyltr 96.9 0.06 1.3E-06 60.7 18.8 205 87-316 419-640 (1082)
394 KOG3846 L-kynurenine hydrolase 96.4 0.32 6.9E-06 46.2 17.1 155 97-281 114-279 (465)
395 KOG2790 Phosphoserine aminotra 92.3 11 0.00023 36.0 15.8 334 45-436 5-368 (370)
396 KOG2040 Glycine dehydrogenase 86.8 48 0.001 35.4 17.2 250 128-431 192-478 (1001)
397 KOG1201 Hydroxysteroid 17-beta 84.4 27 0.00059 33.6 13.0 105 117-228 36-145 (300)
398 COG2102 Predicted ATPases of P 82.9 17 0.00036 33.4 10.4 98 122-235 4-115 (223)
399 PF05368 NmrA: NmrA-like famil 82.4 9.6 0.00021 35.3 9.3 97 122-237 1-99 (233)
400 PRK04296 thymidine kinase; Pro 73.9 41 0.00089 30.2 10.5 121 129-274 17-140 (190)
401 PRK08265 short chain dehydroge 73.8 63 0.0014 30.3 12.3 100 119-225 6-107 (261)
402 PRK12936 3-ketoacyl-(acyl-carr 66.3 1.1E+02 0.0023 28.1 12.1 83 120-208 7-89 (245)
403 PF00106 adh_short: short chai 66.0 79 0.0017 27.0 10.4 100 122-227 3-110 (167)
404 PRK06500 short chain dehydroge 65.5 95 0.0021 28.6 11.5 81 120-206 7-87 (249)
405 COG4221 Short-chain alcohol de 64.4 58 0.0013 30.5 9.2 100 121-227 7-111 (246)
406 COG1105 FruK Fructose-1-phosph 63.6 1.4E+02 0.0031 29.1 12.1 61 178-241 108-168 (310)
407 cd02742 GH20_hexosaminidase Be 63.2 17 0.00037 35.5 6.0 68 158-237 23-90 (303)
408 PRK06483 dihydromonapterin red 63.0 1.2E+02 0.0027 27.7 11.7 77 121-205 4-80 (236)
409 cd06568 GH20_SpHex_like A subg 62.5 13 0.00029 36.7 5.1 69 158-237 25-93 (329)
410 PRK05872 short chain dehydroge 61.8 1.3E+02 0.0028 29.0 11.9 85 118-208 8-93 (296)
411 TIGR01470 cysG_Nterm siroheme 60.8 98 0.0021 28.2 10.2 96 117-240 7-103 (205)
412 PF13460 NAD_binding_10: NADH( 60.7 50 0.0011 28.9 8.2 89 122-232 1-89 (183)
413 TIGR00290 MJ0570_dom MJ0570-re 60.3 93 0.002 28.8 9.9 97 122-234 4-113 (223)
414 PRK07067 sorbitol dehydrogenas 59.9 1.5E+02 0.0032 27.6 11.8 81 120-206 7-87 (257)
415 PRK07063 short chain dehydroge 59.1 1.5E+02 0.0033 27.5 12.3 84 118-206 6-93 (260)
416 smart00642 Aamy Alpha-amylase 58.8 43 0.00092 29.4 7.2 26 217-242 68-93 (166)
417 PRK05678 succinyl-CoA syntheta 58.7 35 0.00075 33.1 7.1 78 147-242 48-126 (291)
418 PRK07231 fabG 3-ketoacyl-(acyl 57.7 1.5E+02 0.0034 27.1 11.8 85 119-208 5-90 (251)
419 cd06562 GH20_HexA_HexB-like Be 57.0 18 0.00038 36.1 5.0 63 159-237 26-88 (348)
420 PF10087 DUF2325: Uncharacteri 57.0 83 0.0018 24.6 7.9 68 154-237 13-80 (97)
421 PRK06182 short chain dehydroge 55.2 1.5E+02 0.0032 27.9 11.0 96 121-225 5-102 (273)
422 PRK06463 fabG 3-ketoacyl-(acyl 54.7 1.8E+02 0.0039 27.0 12.0 80 120-207 8-87 (255)
423 TIGR00289 conserved hypothetic 54.7 1.5E+02 0.0033 27.4 10.3 97 122-234 4-113 (222)
424 PRK12481 2-deoxy-D-gluconate 3 54.7 1.8E+02 0.0039 27.0 11.8 82 120-208 9-91 (251)
425 COG0505 CarA Carbamoylphosphat 54.4 33 0.0007 33.9 6.0 55 142-212 178-234 (368)
426 PRK05717 oxidoreductase; Valid 54.0 1.7E+02 0.0036 27.2 11.0 83 118-206 9-91 (255)
427 COG2984 ABC-type uncharacteriz 53.1 2.1E+02 0.0045 28.0 11.2 128 89-241 66-197 (322)
428 TIGR01019 sucCoAalpha succinyl 51.1 53 0.0011 31.7 7.0 78 147-242 46-124 (286)
429 PRK06139 short chain dehydroge 50.7 2.2E+02 0.0048 28.0 11.6 81 119-206 7-91 (330)
430 cd06563 GH20_chitobiase-like T 50.4 29 0.00063 34.7 5.4 74 159-237 26-104 (357)
431 PRK08862 short chain dehydroge 50.3 1.9E+02 0.004 26.6 10.5 82 120-208 6-91 (227)
432 TIGR02415 23BDH acetoin reduct 49.9 2.1E+02 0.0046 26.3 11.6 86 122-213 3-91 (254)
433 cd06570 GH20_chitobiase-like_1 49.7 24 0.00051 34.6 4.4 56 165-237 31-86 (311)
434 PRK08263 short chain dehydroge 49.0 2.2E+02 0.0048 26.8 11.1 80 121-206 5-84 (275)
435 PRK07825 short chain dehydroge 48.9 2.3E+02 0.005 26.5 11.4 79 120-206 6-85 (273)
436 PF01902 ATP_bind_4: ATP-bindi 48.9 1.2E+02 0.0027 27.9 8.7 98 122-235 4-114 (218)
437 TIGR03573 WbuX N-acetyl sugar 48.6 2.6E+02 0.0056 27.8 11.7 108 119-247 60-175 (343)
438 PRK07523 gluconate 5-dehydroge 48.5 2.2E+02 0.0049 26.3 12.5 82 119-206 10-94 (255)
439 KOG1199 Short-chain alcohol de 48.5 1.2E+02 0.0025 26.9 7.8 98 122-226 12-118 (260)
440 PRK07109 short chain dehydroge 48.2 2.8E+02 0.006 27.2 12.0 81 119-205 8-91 (334)
441 KOG1465 Translation initiation 47.4 2.8E+02 0.006 27.0 11.5 107 118-240 161-272 (353)
442 PRK06194 hypothetical protein; 47.3 2.5E+02 0.0055 26.5 12.3 82 120-206 7-90 (287)
443 PRK06841 short chain dehydroge 47.3 2.3E+02 0.005 26.1 12.0 83 119-207 15-97 (255)
444 PRK06196 oxidoreductase; Provi 47.2 2.1E+02 0.0046 27.7 10.9 81 118-206 25-106 (315)
445 PRK07666 fabG 3-ketoacyl-(acyl 46.9 2.3E+02 0.0049 25.9 12.4 101 120-226 8-113 (239)
446 cd06569 GH20_Sm-chitobiase-lik 46.0 40 0.00087 34.9 5.6 78 159-237 30-115 (445)
447 cd01994 Alpha_ANH_like_IV This 45.8 2.3E+02 0.0049 25.6 10.9 101 122-235 3-117 (194)
448 COG0296 GlgB 1,4-alpha-glucan 45.8 26 0.00055 37.7 4.2 34 211-244 206-239 (628)
449 PRK08589 short chain dehydroge 45.7 2.6E+02 0.0057 26.2 12.2 82 120-208 7-90 (272)
450 PF00728 Glyco_hydro_20: Glyco 45.1 16 0.00035 36.2 2.6 65 160-237 27-91 (351)
451 PF08543 Phos_pyr_kin: Phospho 44.9 64 0.0014 30.3 6.5 55 181-243 43-97 (246)
452 PRK05693 short chain dehydroge 44.2 2.8E+02 0.006 26.0 11.4 77 121-206 3-79 (274)
453 TIGR01832 kduD 2-deoxy-D-gluco 44.0 2.6E+02 0.0056 25.6 12.1 83 118-206 4-87 (248)
454 PRK05867 short chain dehydroge 43.7 2.7E+02 0.0058 25.7 12.2 83 119-206 9-93 (253)
455 KOG2774 NAD dependent epimeras 43.7 98 0.0021 28.8 7.0 53 176-243 110-162 (366)
456 COG4098 comFA Superfamily II D 43.4 2.1E+02 0.0045 28.5 9.4 34 122-155 123-156 (441)
457 PF02662 FlpD: Methyl-viologen 43.3 52 0.0011 27.3 4.9 59 165-233 28-91 (124)
458 COG1088 RfbB dTDP-D-glucose 4, 43.3 2.6E+02 0.0057 27.2 10.0 110 121-247 2-136 (340)
459 PRK06200 2,3-dihydroxy-2,3-dih 43.3 1.5E+02 0.0033 27.7 8.9 83 119-208 6-88 (263)
460 PRK06079 enoyl-(acyl carrier p 43.3 1.6E+02 0.0036 27.3 9.1 84 118-208 6-91 (252)
461 COG2240 PdxK Pyridoxal/pyridox 43.2 2.6E+02 0.0056 26.9 10.0 22 419-440 233-254 (281)
462 PRK07890 short chain dehydroge 42.6 2.3E+02 0.0051 26.1 10.1 82 120-206 6-89 (258)
463 cd06564 GH20_DspB_LnbB-like Gl 42.6 51 0.0011 32.5 5.6 26 211-236 74-99 (326)
464 PF14258 DUF4350: Domain of un 42.4 99 0.0021 22.4 5.9 34 201-238 36-70 (70)
465 PRK08063 enoyl-(acyl carrier p 42.1 2.8E+02 0.006 25.4 10.8 81 121-207 6-90 (250)
466 PRK08277 D-mannonate oxidoredu 41.4 3.1E+02 0.0066 25.8 12.2 83 118-206 9-94 (278)
467 COG1184 GCD2 Translation initi 41.3 3.5E+02 0.0075 26.4 11.6 108 117-242 117-232 (301)
468 COG2870 RfaE ADP-heptose synth 41.0 95 0.0021 31.4 6.9 105 125-240 72-179 (467)
469 PRK06484 short chain dehydroge 40.9 2.8E+02 0.0061 29.0 11.4 79 121-205 7-85 (520)
470 PRK08643 acetoin reductase; Va 40.9 2.9E+02 0.0064 25.4 11.8 81 121-207 4-87 (256)
471 PRK05876 short chain dehydroge 40.9 3.2E+02 0.0069 25.8 12.2 83 120-208 7-91 (275)
472 PRK08176 pdxK pyridoxal-pyrido 40.8 1.9E+02 0.0041 27.7 9.2 56 181-243 68-130 (281)
473 COG1648 CysG Siroheme synthase 40.7 1.5E+02 0.0033 27.1 8.0 90 117-235 10-100 (210)
474 PRK06482 short chain dehydroge 40.6 3.1E+02 0.0068 25.7 11.0 80 121-206 4-83 (276)
475 cd00950 DHDPS Dihydrodipicolin 40.3 1.5E+02 0.0034 28.3 8.5 57 170-231 9-65 (284)
476 PRK09441 cytoplasmic alpha-amy 40.2 58 0.0012 34.1 5.9 27 217-243 79-105 (479)
477 TIGR03325 BphB_TodD cis-2,3-di 39.9 1.9E+02 0.004 27.0 8.9 83 119-208 5-87 (262)
478 TIGR03590 PseG pseudaminic aci 39.9 2.8E+02 0.006 26.5 10.2 88 137-241 25-113 (279)
479 PRK03170 dihydrodipicolinate s 39.9 1.6E+02 0.0034 28.4 8.6 56 171-231 11-66 (292)
480 PRK06935 2-deoxy-D-gluconate 3 39.9 3.1E+02 0.0067 25.4 11.9 82 118-206 14-98 (258)
481 KOG1467 Translation initiation 39.5 2.5E+02 0.0053 29.2 9.6 132 94-242 325-472 (556)
482 TIGR03679 arCOG00187 arCOG0018 39.5 3.1E+02 0.0066 25.2 11.0 99 123-234 2-114 (218)
483 PF02571 CbiJ: Precorrin-6x re 39.0 95 0.0021 29.3 6.5 93 121-236 2-97 (249)
484 PRK06180 short chain dehydroge 38.7 3.4E+02 0.0074 25.5 11.0 80 121-206 6-85 (277)
485 PRK05650 short chain dehydroge 38.6 3.3E+02 0.0072 25.4 11.7 80 121-206 2-84 (270)
486 PRK13394 3-hydroxybutyrate deh 38.6 3.2E+02 0.0069 25.2 11.8 82 120-206 8-91 (262)
487 PRK08220 2,3-dihydroxybenzoate 38.3 3.2E+02 0.0069 25.0 11.7 77 118-206 7-83 (252)
488 PRK12859 3-ketoacyl-(acyl-carr 38.2 2.9E+02 0.0064 25.6 10.0 102 118-226 5-125 (256)
489 COG0816 Predicted endonuclease 38.2 1.2E+02 0.0026 25.8 6.4 56 181-241 40-98 (141)
490 TIGR00196 yjeF_cterm yjeF C-te 37.8 2.4E+02 0.0052 26.7 9.4 100 118-239 23-126 (272)
491 TIGR01963 PHB_DH 3-hydroxybuty 37.7 3.2E+02 0.007 25.0 11.3 81 121-206 3-85 (255)
492 PRK08309 short chain dehydroge 37.2 2.9E+02 0.0064 24.4 10.6 97 122-233 3-100 (177)
493 PRK08278 short chain dehydroge 37.1 3.6E+02 0.0078 25.3 12.2 81 120-206 7-97 (273)
494 PRK07024 short chain dehydroge 37.1 3.4E+02 0.0074 25.1 11.4 80 121-205 4-84 (257)
495 PRK10785 maltodextrin glucosid 37.0 1.1E+02 0.0023 33.1 7.4 61 181-243 176-250 (598)
496 cd00951 KDGDH 5-dehydro-4-deox 36.7 1.7E+02 0.0037 28.2 8.1 56 178-236 15-73 (289)
497 PRK12743 oxidoreductase; Provi 35.9 3.6E+02 0.0077 24.9 10.4 80 121-206 4-87 (256)
498 PRK06114 short chain dehydroge 35.4 3.6E+02 0.0078 24.9 11.7 83 118-206 7-93 (254)
499 COG1587 HemD Uroporphyrinogen- 35.3 2.8E+02 0.0062 25.9 9.3 92 125-232 105-198 (248)
500 PRK08057 cobalt-precorrin-6x r 35.2 1.3E+02 0.0027 28.5 6.7 92 120-236 3-96 (248)
No 1
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.3e-74 Score=596.11 Aligned_cols=479 Identities=62% Similarity=1.122 Sum_probs=410.9
Q ss_pred CccccccchhhhhhhhhcCCCCCCCccchhhhhhhcCCCCCCCCCCCcccccchhhhhcHHHHHHHHhcCCCCccccccc
Q 011570 1 MAFALSNQVQLLSKIAAGNGHGEDSPYFDGWKAFESDPYHPTKNPNGVIQMGLAENLLCHELVEDWLMNNPKASICSAEG 80 (483)
Q Consensus 1 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~ 80 (483)
|.+.--++..++++++.+.++|..++||.+|..|..++|++..||.++|+|+++||+++.+.+.+++.+.+...++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~ 80 (496)
T PLN02376 1 MGLPAKNKGAILSKIATNDQHGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQLCLDLIKDWVKENPEASICTLEG 80 (496)
T ss_pred CCccccchhhhhhhhhcccccCCCCchHHHHHHHhCCCCCcccCCCceEEeecchhhhhHHHHHHHHHhCchhhcccccc
Confidence 44443344789999999999999999999999999999999999999999999999999999999999887765565566
Q ss_pred cccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH
Q 011570 81 LNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL 160 (483)
Q Consensus 81 ~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~ 160 (483)
+..+.+...|+++.|.++||++||+|+++.+|..+++++++|++|+|+++++..++.+|++|||.|++++|+|+.|...+
T Consensus 81 ~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~ 160 (496)
T PLN02376 81 IHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDL 160 (496)
T ss_pred ccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHH
Confidence 66677788899999999999999999998877556789999999999999999999999999999999999999999887
Q ss_pred hhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccc
Q 011570 161 RWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEI 240 (483)
Q Consensus 161 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Dea 240 (483)
....|+++++++++.+++|.+|++.++++++...+.+.++|+|++||||||||.+++.+++++|+++|++++++||+||+
T Consensus 161 ~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEi 240 (496)
T PLN02376 161 RWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEI 240 (496)
T ss_pred HhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcC
Confidence 74349999999998667899999999988765544455899999999999999999999999999999999999999999
Q ss_pred cccCccCCCCCcchHHHhhhhcc--ccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHH
Q 011570 241 YAATVFTKESSFVSIAEIIDQDI--ACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLI 318 (483)
Q Consensus 241 y~~~~~~~~~~~~s~~~l~~~~~--~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~ 318 (483)
|.++.|.+ .++.++.++..... +.+.+++++++||||.||+||+|+||++++++.+.+.......++.+++++|.++
T Consensus 241 Y~~~~f~~-~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~~~~vs~~~Q~a~ 319 (496)
T PLN02376 241 YAATVFAG-GDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSSFGLVSSQTQLML 319 (496)
T ss_pred ccccccCC-CCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHH
Confidence 99988887 66778777643110 0012467889999999999999999999977888777777777777899999999
Q ss_pred HHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhc-cChHHHHHHHHHHHHhcCeEe
Q 011570 319 ATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKE-QTYEAEMALWRVIINEVKLNV 397 (483)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~-~~~~~~~~~~~~Ll~~~gV~v 397 (483)
+.++.++.++++++++.++.++++++.+.+.|++.|+++.+++||+|+|++++..... ..+..+.++++.+++++||.|
T Consensus 320 ~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v 399 (496)
T PLN02376 320 ASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNV 399 (496)
T ss_pred HHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEE
Confidence 9999998887889999999999999999999999999999999999999999865433 334455689999998889999
Q ss_pred eCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhhccC------------ccchhhcc-ccccceeccccccc
Q 011570 398 SPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNVEAKV------------PNKKKLCW-QRSLRLSMSSRRMD 464 (483)
Q Consensus 398 ~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~~~~------------~~~~~~~~-~~~~~~~~~~~~~~ 464 (483)
.||+.|+...++|+||+|+..+++.+++++++|++++.+.++... ..+++.+| ++.|||+. .|+.+
T Consensus 400 ~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 478 (496)
T PLN02376 400 SPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKNAKKLKWRQSNLRLSF-RRLYE 478 (496)
T ss_pred eCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHhhhcccccccccccccchhhcchhhhhccceeecc-chhhh
Confidence 999999877789999999966889999999999999987664422 22345668 45588877 46678
Q ss_pred ccccCCC-CCCCCccccc
Q 011570 465 DFMASPC-MSPQSPLVQA 481 (483)
Q Consensus 465 ~~~~~~~-~~~~~~~~~~ 481 (483)
++|-||. |+|+||||++
T Consensus 479 ~~~~~~~~~~~~~~~~~~ 496 (496)
T PLN02376 479 DGLSSPGIMSPHSPLLRA 496 (496)
T ss_pred ccccCCCCCCCCCcccCC
Confidence 9999985 6789999985
No 2
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-72 Score=527.16 Aligned_cols=427 Identities=60% Similarity=1.066 Sum_probs=407.2
Q ss_pred cchhhhhhhhhcCCCCCCCccchhhhhhhcCCCCCCCCCCCcccccchhhhhcHHHHHHHHhcCCCCccccccccccccc
Q 011570 7 NQVQLLSKIAAGNGHGEDSPYFDGWKAFESDPYHPTKNPNGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKG 86 (483)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (483)
..+..+++++...++|..++||.+|.+|..++|++.+||.|+|+|+.+||.++++++..|+.+.++...+..++.....+
T Consensus 34 ~~~~~lS~~~~~~~~~e~S~yf~g~~~y~~npy~~~~Np~GiIQmGlaENqlc~DL~~~wl~k~~~~~~~~~eg~~~f~~ 113 (471)
T KOG0256|consen 34 ASNNLLSSKAVDDKHGEDSSYFYGWKAYEKNPYDPIKNPLGIIQMGLAENQLCFDLIESWLSKNPEASNCTREGQSSFDE 113 (471)
T ss_pred hhhhhcccccccccccccchHHHHHHhcccCCCCCCCCchHHHHhhhhhhHHHHHHHHHHHHhChhhhhcccccccchhh
Confidence 45678999999999999999999999999999999999999999999999999999999999988888888888888889
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCc
Q 011570 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGV 166 (483)
Q Consensus 87 ~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~ 166 (483)
+..|+++.|.+.+|+++|+|+...+|..+..+|+++++|+|++.++..++..|++|||..++|.|.|+++...+++..|+
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgv 193 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGV 193 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCc
Confidence 99999999999999999999999998888899999999999999999999999999999999999999999999998999
Q ss_pred EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCcc
Q 011570 167 QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVF 246 (483)
Q Consensus 167 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~ 246 (483)
++++|.+...++|+++.++||+++.++++.+.++|.|+++||+||.|++++++++..++++|.++++++|+||+|+..+|
T Consensus 194 eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF 273 (471)
T KOG0256|consen 194 EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVF 273 (471)
T ss_pred eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChh
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQ 326 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~ 326 (483)
+. ..|.|+.++.... +...++|.+++|+||.||+||+|+|.++..++.+..+..++..++.+|++.|..++.+|.+..
T Consensus 274 ~~-~~F~Sv~ev~~~~-~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~vSs~tQ~~la~LLSD~~ 351 (471)
T KOG0256|consen 274 DK-SEFRSVLEVRKDP-HLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASLLSDEE 351 (471)
T ss_pred Cc-cCceEHHHHhhcc-ccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCCcHHHHHHHHHHhchHH
Confidence 98 8999999887632 114678999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC
Q 011570 327 FVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP 406 (483)
Q Consensus 327 ~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~ 406 (483)
+.+.|+.+...+++.+..++.+.|+++||++.+.++|+|+|+++.+.+...+++.+.+++++++.+.++.+.||+.|.+.
T Consensus 352 f~~~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~ 431 (471)
T KOG0256|consen 352 FTREYLRENNKRLRIRHRYIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCH 431 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHhcCCceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred CCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 407 NPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 407 ~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
.+||+|+||++..++.++-+++||+.++.
T Consensus 432 EpGWFRvcFAn~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 432 EPGWFRVCFANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 99999999998788888889999999988
No 3
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.7e-67 Score=539.24 Aligned_cols=441 Identities=59% Similarity=1.016 Sum_probs=384.1
Q ss_pred CccccccchhhhhhhhhcCCCCCCCccchhhhhhhcCCCCCCCCCCCcccccchhhhhcHHHHHHHHhcCCCCccccccc
Q 011570 1 MAFALSNQVQLLSKIAAGNGHGEDSPYFDGWKAFESDPYHPTKNPNGVIQMGLAENLLCHELVEDWLMNNPKASICSAEG 80 (483)
Q Consensus 1 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~ 80 (483)
|+-...|++..+++++++..++..++||..|..+..++|++..||.|+|+|+++||.++.+.+.+++.+.+...++....
T Consensus 2 ~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~g~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~ 81 (447)
T PLN02607 2 MAIEIAQPAVGLSKVAVSETHGEDSPYFAGWKAYDEDPYDESHNPSGVIQMGLAENQVSFDLLEEYLKQHPEASSWGGKG 81 (447)
T ss_pred cchhhccchhhhhhhhhhcccCCCchHHHHHHHhcCCCCCcccCCCceEEEechhhhhhHHHHHHHHHhCchhhcccccc
Confidence 56677899999999999999999999999999999999999999999999999999999999999998876644332222
Q ss_pred cccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH
Q 011570 81 LNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL 160 (483)
Q Consensus 81 ~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~ 160 (483)
......+..|+++.|.++||+++|+|++++++...++++++|++|+|+++++.+++.++++|||.|+++.|+|+.|...+
T Consensus 82 ~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~ 161 (447)
T PLN02607 82 APGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDL 161 (447)
T ss_pred ccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH
Confidence 22234556799999999999999999998877556789999999999999999999999999999999999999998888
Q ss_pred hhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccc
Q 011570 161 RWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEI 240 (483)
Q Consensus 161 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Dea 240 (483)
....|+++++++++++++|.+|++.+++++.+..+.+.++|+|+++|||||||.++|++++++|+++|++++++||+||+
T Consensus 162 ~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEi 241 (447)
T PLN02607 162 RWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEI 241 (447)
T ss_pred HhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEecc
Confidence 75459999999998777899999999999988777788999999999999999999999999999999999999999999
Q ss_pred cccCccCCCCCcchHHHhhhhcccc-CCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHH
Q 011570 241 YAATVFTKESSFVSIAEIIDQDIAC-NRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIA 319 (483)
Q Consensus 241 y~~~~~~~~~~~~s~~~l~~~~~~~-~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~ 319 (483)
|++++|++ .++.|+.++...+... ..++|++++||||.||++|+|+||+++.++.+...+.....+..+++++|.+++
T Consensus 242 Ya~~~f~~-~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~~~~~s~~~q~~~~ 320 (447)
T PLN02607 242 YSGSVFSA-SEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLVSSQTQHLLA 320 (447)
T ss_pred ccccccCC-CCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 99988886 6678887764321100 147899999999999999999999999777777777666666668999999999
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeC
Q 011570 320 TMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSP 399 (483)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~p 399 (483)
.+|.+.++.++++++.+++++++++.+.+.|++.|+++.++++|+|+|++++..........+.+++.++++++||.|.|
T Consensus 321 ~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~p 400 (447)
T PLN02607 321 SMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISP 400 (447)
T ss_pred HHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcC
Confidence 99999888788999999999999999999999999999999999999999986543222334557888899888999999
Q ss_pred CCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhhccC
Q 011570 400 GSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNVEAKV 442 (483)
Q Consensus 400 g~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~~~~ 442 (483)
|+.|+...++|+||+|+..+++.++++++||.+++++.++..-
T Consensus 401 G~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~~~~~~~ 443 (447)
T PLN02607 401 GSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFMDRRKTASS 443 (447)
T ss_pred ccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999877889999999966899999999999999988776633
No 4
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=4.6e-63 Score=510.32 Aligned_cols=426 Identities=58% Similarity=1.048 Sum_probs=357.1
Q ss_pred hhhhhhcCCCCCCCccchhhhhhhcCCCCCCCCCCCcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCC
Q 011570 12 LSKIAAGNGHGEDSPYFDGWKAFESDPYHPTKNPNGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQ 91 (483)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 91 (483)
++.+++..-++...+||..+..+..++|++..||.++|+|+++||+++.+.+.+++...+....+..........+..|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~p~g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~ 83 (468)
T PLN02450 4 LSRKATCNSHGQDSSYFLGWEEYEKNPYDEIKNPSGIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQ 83 (468)
T ss_pred cchhhcccccCCCCchHHHHHHHhcCCCCcccCCCeeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCC
Confidence 34455555566777899999999999999999999999999999999999998988765332111001111123456799
Q ss_pred CCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEe
Q 011570 92 DYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPV 171 (483)
Q Consensus 92 ~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v 171 (483)
++.|.++||++||+|+++.++..+++++++|++|+|+++++..++.++++|||.|++++|+|+.|...+....|++++++
T Consensus 84 ~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v 163 (468)
T PLN02450 84 DYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPI 163 (468)
T ss_pred CCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEE
Confidence 99999999999999999887765668999999999999999999999999999999999999999888774349999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+++++++|.+|++.+++++.+..+.+.++|+|++||||||||.++|.+++++|+++|++++++||+||+|.++.|.+ .+
T Consensus 164 ~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~-~~ 242 (468)
T PLN02450 164 HCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDS-PG 242 (468)
T ss_pred ecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCC-CC
Confidence 99866789999999999998765556689999999999999999999999999999999999999999999988876 55
Q ss_pred cchHHHhhhhc---cccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHH
Q 011570 252 FVSIAEIIDQD---IACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFV 328 (483)
Q Consensus 252 ~~s~~~l~~~~---~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~ 328 (483)
+.++.++.... +....++|++++||||.||++|+|+||++++++.+.+.+.+...++.+++++|.+++.+|.++.+.
T Consensus 243 ~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~ 322 (468)
T PLN02450 243 FVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSALLSDKKFT 322 (468)
T ss_pred cccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhH
Confidence 66665543210 000247899999999999999999999999777666666666656668999999999999998776
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCC
Q 011570 329 EKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNP 408 (483)
Q Consensus 329 ~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~ 408 (483)
++++++.++.++++++.+.+.|+++|+++.+++||+|+|++++...+...+..+.+++..+++++||.|.||+.|+...+
T Consensus 323 ~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~ 402 (468)
T PLN02450 323 KNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEP 402 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCC
Confidence 66888899999999999999999999999999999999999986554444445567889999889999999999987678
Q ss_pred CEEEEEeccCCHHHHHHHHHHHHHHHHHhh
Q 011570 409 GWFRVCFANMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 409 ~~iRis~~~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+|+||+|+..+++++++++++|++++++..
T Consensus 403 g~~Rl~f~~~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 403 GWFRVCFANMSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred CEEEEEecCCCHHHHHHHHHHHHHHHHhcc
Confidence 999999996688999999999999987654
No 5
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-59 Score=470.13 Aligned_cols=357 Identities=28% Similarity=0.514 Sum_probs=308.8
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCc-EE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDR-IV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~-i~ 123 (483)
.++|+|+++++.++ ++.+.+++.+.... ... .|.+..|.++||++||+++.+.+| +.+++++ |+
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~-----------~~~-~Y~~~~G~~~LReaia~~~~~~~~--~~~~~~~eii 93 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEE-----------GGT-HYTPSAGIPELREAIAEKYKRRYG--LDVDPEEEII 93 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhc-----------ccC-CCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCeEE
Confidence 57899999999876 55566555442110 011 677999999999999999999988 6678876 99
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCC-CCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSS-NDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
+|+|+++++..++.++++|||+|++++|.|+.|...+... |++++.++++.+ .+|.+|++.+++++.+ ++|+
T Consensus 94 vt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~-gg~~v~v~l~~~~~~f~~d~~~l~~~i~~------ktk~ 166 (393)
T COG0436 94 VTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLA-GGKPVPVPLDEEENGFKPDLEDLEAAITP------KTKA 166 (393)
T ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhc-CCEEEEEeCCcCccCCcCCHHHHHhhcCc------cceE
Confidence 9999999999999999999999999999999999999986 999999998655 4899999999999975 8999
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
|++++||||||.+++++++++|+++|++||++||+||+|.++.|++ ..+.|+.++.. ..+++|+++||||.|+|
T Consensus 167 i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~-~~~~s~~~~~~-----~~~~~i~i~s~SK~~~m 240 (393)
T COG0436 167 IILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDG-AEHPSILELAG-----ARDRTITINSFSKTYGM 240 (393)
T ss_pred EEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCC-CCcCCHhhcCC-----CcceEEEEecccccccc
Confidence 9999999999999999999999999999999999999999999987 56678887754 35889999999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceeec
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLK 359 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~ 359 (483)
+|||+||++++++.+.+.+.+.... ...+.++|.++..+|+..+. ....+..++.+++||+.+.+.|.+. |+.+..
T Consensus 241 tGwRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~-~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~ 319 (393)
T COG0436 241 TGWRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQS-DEVVEEMREEYRERRDLLVEALNEIGGLSVVK 319 (393)
T ss_pred cccceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccc-hHHHHHHHHHHHHHHHHHHHHHHhcCCeeecc
Confidence 9999999999657777776654433 45788999999999998743 4456777789999999999999988 599888
Q ss_pred -CCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC-CCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 360 -SNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP-NPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 360 -~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~-~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
|+|+||+|++++... ++.+|+.+|++++||.|.||+.|+.. +.++|||+++ .+++++++++++|+++++..
T Consensus 320 ~p~Ga~Y~~~~i~~~~------d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~-~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 320 PPEGAFYLFPKIPELL------DSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLA-TSEETLEEALRRLARFLAEY 392 (393)
T ss_pred CCCeeEEEEeecCCCC------CHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEe-cCHHHHHHHHHHHHHHHHhc
Confidence 889999999999752 24589999999999999999999985 7899999998 46699999999999988764
No 6
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=9e-54 Score=434.23 Aligned_cols=354 Identities=21% Similarity=0.356 Sum_probs=287.4
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RI 122 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i 122 (483)
+.++|+|+.++++++ ++.+.+.+.+.... .....|+++.|.++||++||+|+.+.+| +.++++ +|
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~I 95 (388)
T PRK07366 29 GKELIDLSLGSSDLPAPAHALEAIAQSLHD-----------PSTHGYLLFHGTLDFREAAAQWYEQRFG--LAVDPETEV 95 (388)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhC-----------cccCCCCCCCCCHHHHHHHHHHHHHhhC--CcCCCcCeE
Confidence 456799999999876 45555555431100 1235799889999999999999988777 567898 69
Q ss_pred EEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 123 VMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
++|+|+++++.+++.+++++||.|++++|+|+.|...++.. |+++++++++++++|.+|++++++.+.. ++|+
T Consensus 96 ~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~ 168 (388)
T PRK07366 96 LPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLA-GGQIYPMPLRAENDFLPVFADIPTEVLA------QARL 168 (388)
T ss_pred EECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhc-CCEEEEEECCCccCCCCCHHHHHHhhcc------cceE
Confidence 99999999999999999999999999999999999998886 9999999998777889999999877643 6899
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC-cchHHHhhhhccccCCCeEEEEecCccccC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS-FVSIAEIIDQDIACNRNLIHIVYSLSKDMG 281 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~-~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g 281 (483)
|+++|||||||.++|.+++++|+++|+++|++||+||+|.++.|++ .. ..++.++.. ..+++|+++||||+||
T Consensus 169 i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~-~~~~~~~~~~~~-----~~~~vi~~~SfSK~~g 242 (388)
T PRK07366 169 MVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDG-EVEPPSILQADP-----EKSVSIEFFTLSKSYN 242 (388)
T ss_pred EEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCC-CCCCCChhhCCC-----CcccEEEEeecccccC
Confidence 9999999999999999999999999999999999999999988765 32 455665533 3457899999999999
Q ss_pred CCCceEEEEEecChHHHHHHHHhhhcCCC---ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceee
Q 011570 282 FPGFRVGIIYSYNDQVVSCARKMSSFGLV---SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCL 358 (483)
Q Consensus 282 ~~GlRiG~li~~~~~l~~~~~~~~~~~~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~ 358 (483)
+||+|+||+++ ++.+.+.+......... +.+.|.+++.+..+ ++++++.++.++++++.+.+.|+++|+.+.
T Consensus 243 ~~GlRiG~~v~-~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~----~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~ 317 (388)
T PRK07366 243 MGGFRIGFAIG-NAQLIQALRQVKAVVDFNQYRGILNGAIAALTGP----QATVQQTVQIFRQRRDAFINALHQIGWPVP 317 (388)
T ss_pred CcchhheehcC-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc----HHHHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 99999999998 56666666555443222 22344555554433 345788889999999999999998898888
Q ss_pred cCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 359 KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 359 ~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
.|++|+|+|++++..... +..+++..+++++||.|.||+.|+...++|+||+++ .+++++++++++|++++
T Consensus 318 ~p~~g~f~~~~~~~~~~~----~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~-~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 318 LPEATMYVWAKLPEPWQG----NSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALV-HDPDILEEAVERIAAFL 388 (388)
T ss_pred CCCeeEEEEEECCcccCC----CHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEec-CCHHHHHHHHHHHHHhC
Confidence 899999999999864221 123678888888899999999997655689999998 48999999999998763
No 7
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-53 Score=429.96 Aligned_cols=350 Identities=19% Similarity=0.374 Sum_probs=291.8
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC-CcE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP-DRI 122 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~-~~i 122 (483)
..++++|+.++++++ ++.+.+.+.+.... .....|+ ..|.++||++||+|+++.+| +++++ ++|
T Consensus 31 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~-----------~~~~~y~-~~G~~~lr~aia~~~~~~~g--~~~~~~~~I 96 (399)
T PRK07681 31 GHKMIDLSIGNPDMPPADFVREEMVHTANQ-----------KESYGYT-LSGIQEFHEAVTEYYNNTHN--VILNADKEV 96 (399)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhc-----------cccCCCC-CCCcHHHHHHHHHHHHHHhC--CCCCCCCeE
Confidence 346799999998764 45555555431110 0123455 47999999999999998877 56788 899
Q ss_pred EEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 123 VMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
++|+|+++++..++.+++++||.|++++|+|+.|...++.. |++++++|++++++|.+|++.+++++.+ ++++
T Consensus 97 ~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~-G~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~ 169 (399)
T PRK07681 97 LLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMA-GATSYYMPLKKENDFLPDLELIPEEIAD------KAKM 169 (399)
T ss_pred EECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhc-CCEEEEEecCCCCCCcCCHHHHHHhccc------cceE
Confidence 99999999999999999999999999999999999998876 9999999998777899999999888753 7899
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
|+++|||||||.++|.+++++|+++|+++|++||+||+|.++.|++ ..+.++.++.. ..+++|+++||||.||+
T Consensus 170 v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~-~~~~~~~~~~~-----~~~~~i~~~S~SK~~~~ 243 (399)
T PRK07681 170 MILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDG-NKPISFLSVPG-----AKEVGVEINSLSKSYSL 243 (399)
T ss_pred EEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCC-CCCCChhhCCC-----CcccEEEEeecccccCC
Confidence 9999999999999999999999999999999999999999987775 44456655532 34689999999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecC
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKS 360 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~ 360 (483)
+|+|+||+++ ++.+.+.+..... .+.++.+.|.++..++.+.. .++++.++.++++++.+.+.|++.|+++..|
T Consensus 244 ~GlRiG~~i~-~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p 319 (399)
T PRK07681 244 AGSRIGYMIG-NEEIVRALTQFKSNTDYGVFLPIQKAACAALRNGA---AFCEKNRGIYQERRDTLVDGFRTFGWNVDKP 319 (399)
T ss_pred ccceeEEEec-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 9999999998 5556666655442 34588899999999998753 4577778889999999999999999988888
Q ss_pred CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHH
Q 011570 361 NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITS 432 (483)
Q Consensus 361 ~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~ 432 (483)
.+|+|+|++++...+ ..+++..+++++||.|.||..|+..+++++||+++ .+++++++++++|++
T Consensus 320 ~~g~f~~~~l~~~~~------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~-~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 320 AGSMFVWAEIPKGWT------SLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALV-QDEEVLQQAVENIRN 384 (399)
T ss_pred CeeeEEEEECCCCCC------HHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEec-CCHHHHHHHHHHHHH
Confidence 999999999985322 33788888887899999999997656789999998 578999999999987
No 8
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-52 Score=423.95 Aligned_cols=364 Identities=19% Similarity=0.341 Sum_probs=292.8
Q ss_pred CCCcccccchhhhhc-H-HHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-c
Q 011570 45 PNGVIQMGLAENLLC-H-ELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-R 121 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~ 121 (483)
+.++++|+.+.+... + ..+......... .....|++..|.++||+++|+|+.+.+| +.++++ +
T Consensus 32 ~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lR~~ia~~l~~~~~--~~~~~~~~ 97 (403)
T PRK08636 32 GEDIIDFSMGNPDGPTPQHIIDKLCESAQK------------PKTHGYSVSKGIYKLRLAICNWYKRKYN--VDLDPETE 97 (403)
T ss_pred CCCEEEcCCcCCCCCCCHHHHHHHHHHhcC------------CccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCe
Confidence 456789988865543 2 233333322110 1356899999999999999999988777 567887 7
Q ss_pred EEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc-CCce
Q 011570 122 IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES-NIRI 200 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~-~~~~ 200 (483)
|++|+|+++++.+++.++++|||.|++++|+|+.+...++.. |+++++++++.+++|.+|++.+...+++...+ .+++
T Consensus 98 I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 176 (403)
T PRK08636 98 VVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILA-GGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKP 176 (403)
T ss_pred EEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhc-CCEEEEEeccccccCccChhhhhhHHHHHHhhccCCc
Confidence 999999999999999999999999999999999999998886 99999999865557899988775555443222 3478
Q ss_pred eEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCcccc
Q 011570 201 KGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDM 280 (483)
Q Consensus 201 ~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~ 280 (483)
++++++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++ ..+.++..+.. ..+++|+++||||.|
T Consensus 177 ~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~-~~~~~~~~~~~-----~~~~~i~~~S~SK~~ 250 (403)
T PRK08636 177 KYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDG-YKTPSILEVEG-----AKDVAVESYTLSKSY 250 (403)
T ss_pred eEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCC-CCCCChhcCCC-----ccccEEEEEeccccc
Confidence 999999999999999999999999999999999999999999987765 44456665532 236788899999999
Q ss_pred CCCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceee
Q 011570 281 GFPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCL 358 (483)
Q Consensus 281 g~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~ 358 (483)
|+||+|+||+++ ++.+.+.+...... ..++++.|.++..++... ..++++.++.++++++.+.+.|++.|+.+.
T Consensus 251 ~~~GlRiG~iv~-~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 326 (403)
T PRK08636 251 NMAGWRVGFVVG-NKKLVGALKKIKSWLDYGMFTPIQVAATIALDGD---QSCVEEIRETYRKRRDVLIESFANAGWELQ 326 (403)
T ss_pred CCccceeeeeeC-CHHHHHHHHHHHHHhcccCChHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 999999999998 55566555554432 346778888887776532 456788889999999999999999898888
Q ss_pred cCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 359 KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 359 ~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
.|.+|+|+|++++...... .+.+++..+++++||.|.||..|+..+++|+||+++ .+++++++++++|+++++..
T Consensus 327 ~p~~g~~~~~~l~~~~~~~---~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~-~~~~~l~~~~~rl~~~l~~~ 401 (403)
T PRK08636 327 KPRASMFVWAKIPEPARHL---GSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI-ENENRIRQAARNIKKFLKEL 401 (403)
T ss_pred CCCcceEEEEECCCccCCC---CHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec-CCHHHHHHHHHHHHHHHHhh
Confidence 8999999999998643211 134788888888899999999998666789999998 69999999999999999764
No 9
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=6.8e-52 Score=430.40 Aligned_cols=348 Identities=23% Similarity=0.378 Sum_probs=282.1
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-CCCCeEEEeCCCCcChHHHHhhhcC
Q 011570 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-DPGDAFLVPTPYYPGFDRDLRWRTG 165 (483)
Q Consensus 87 ~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~~~~~~~~~~~G 165 (483)
...|+++.|.++||++||+|+.+.+| +++++++|++|+|+++++..++++++ +|||.|+++.|+|+.|...++.. |
T Consensus 108 ~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~-g 184 (481)
T PTZ00377 108 TGAYTDSAGYPFVRKAVAAFIERRDG--VPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLL-G 184 (481)
T ss_pred ccCcCcccCCHHHHHHHHHHHHHhcC--CCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHc-C
Confidence 46799999999999999999998777 66889999999999999999999998 79999999999999999999886 9
Q ss_pred cEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc
Q 011570 166 VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV 245 (483)
Q Consensus 166 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~ 245 (483)
++++.++++++++|.+|++.|++++.+...++.++|+|+++|||||||.++|.+++++|+++|++||++||+||+|.++.
T Consensus 185 ~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~ 264 (481)
T PTZ00377 185 GKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENI 264 (481)
T ss_pred CEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhc
Confidence 99999999877789999999999997654444578999999999999999999999999999999999999999999988
Q ss_pred cCCCCCcchHHHhhhhccccC---CCeEEEEecCccc-cCCCCceEEEEEe--cChHHHHHHHHhhh-cCCCChHHHHHH
Q 011570 246 FTKESSFVSIAEIIDQDIACN---RNLIHIVYSLSKD-MGFPGFRVGIIYS--YNDQVVSCARKMSS-FGLVSSQTQHLI 318 (483)
Q Consensus 246 ~~~~~~~~s~~~l~~~~~~~~---~~~vi~~~S~SK~-~g~~GlRiG~li~--~~~~l~~~~~~~~~-~~~~s~~~q~~~ 318 (483)
|+++.++.++..+..++.. . ..++|+++||||. ++++|||+||+++ .++.+.+.+.+... .+.+++++|.++
T Consensus 265 ~~~~~~~~s~~~~~~~l~~-~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~~~~~~~~Q~a~ 343 (481)
T PTZ00377 265 YDGEKPFISFRKVLLELPA-EYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASINLCSNVVGQLMT 343 (481)
T ss_pred cCCCCCcccHHHHHHhhcc-cccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhheecCCChHHHHHH
Confidence 8542455666554322210 1 1379999999998 6999999999997 25666666555443 345788999999
Q ss_pred HHhcCCh----hH---HHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecC--chhhc----cChHHHHH
Q 011570 319 ATMLSDD----QF---VEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLH--HLLKE----QTYEAEMA 384 (483)
Q Consensus 319 ~~~l~~~----~~---~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~--~~~~~----~~~~~~~~ 384 (483)
..++.+. .. ..++.++.+..++++++.+.+.|+++ |+.+..|+||||+|++++ ..... .....+..
T Consensus 344 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~ 423 (481)
T PTZ00377 344 GLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVL 423 (481)
T ss_pred HHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHH
Confidence 9998641 11 12334444556899999999999988 899999999999998764 21110 00112335
Q ss_pred HHHHHHHhcCeEeeCCCCCCCC-CCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhh
Q 011570 385 LWRVIINEVKLNVSPGSSFHCP-NPGWFRVCFANMDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 385 ~~~~Ll~~~gV~v~pg~~f~~~-~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
++..+++++||.|.||+.|+.. +++++|||++ .+++++++++++|++++++..+
T Consensus 424 ~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~-~~~e~l~~~l~rl~~~~~~~~~ 478 (481)
T PTZ00377 424 YCLELLESTGIVVVPGSGFGQKPGTYHFRITIL-PPEEQIEEMVKKIKEFHESFMK 478 (481)
T ss_pred HHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 6788888899999999999753 4569999998 7889999999999999987643
No 10
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-52 Score=424.15 Aligned_cols=358 Identities=17% Similarity=0.317 Sum_probs=289.3
Q ss_pred CCCCcccccchhhh-h-cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC-C
Q 011570 44 NPNGVIQMGLAENL-L-CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP-D 120 (483)
Q Consensus 44 ~~~~~i~l~~~~n~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~-~ 120 (483)
-+.+.++|+.+++. . +++.+.+.+.+.... .....|+++.|.++||++||+++.+.+| +++++ +
T Consensus 37 ~~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~LR~aia~~l~~~~g--~~~~~~~ 103 (405)
T PRK06207 37 LPGRPVDFSHGDVDAHEPTPGAFELFSAGVER-----------GGVQAYTEYRGDADIRELLAARLAAFTG--APVDAAD 103 (405)
T ss_pred CCCCceecCCcCCCCCCCCHHHHHHHHHHHhc-----------CCCccCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCC
Confidence 35677899987654 2 334444433321000 1235799999999999999999998877 55788 8
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecC---CCCCcccCHHHHHHHHHHHHhcC
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCD---SSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~---~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
+|++|+|+++++..++.+++++||+|++++|+|+.+...++.. |+++++++++ .+.+|.+|++.|++++.+
T Consensus 104 ~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~----- 177 (405)
T PRK06207 104 ELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFF-EGEMVPVQLDYLSADKRAGLDLDQLEEAFKA----- 177 (405)
T ss_pred CEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHc-CCEEEEEeccccCcccCCCcCHHHHHHhhhh-----
Confidence 9999999999999999999999999999999999999988876 9999999986 234688999999998864
Q ss_pred CceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCc
Q 011570 198 IRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLS 277 (483)
Q Consensus 198 ~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~S 277 (483)
++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++ ..+.++..+.. ..+++|+++|||
T Consensus 178 -~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~~~~~~~~~~-----~~~~vi~i~SfS 250 (405)
T PRK06207 178 -GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDG-TSYTHLRALPI-----DPENVITIMGPS 250 (405)
T ss_pred -cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC-CCCCchhcCCC-----CcCcEEEEecch
Confidence 68899999999999999999999999999999999999999999988876 44455544422 358999999999
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHHHHHHhhhcC-
Q 011570 278 KDMGFPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDD-QFVEKFIAESAKRIAERHKAFTWGLSQV- 353 (483)
Q Consensus 278 K~~g~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~l~~~L~~~- 353 (483)
|+||+||+|+||+++ ++.+.+.+...... ...+.++|.++..++.++ .+ +++..+.++++++.+.+.|+++
T Consensus 251 K~~~lpGlRiG~ii~-~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~----~~~~~~~~~~~r~~l~~~L~~~~ 325 (405)
T PRK06207 251 KTESLSGYRLGVAFG-SPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGW----MKDRIARHQAIRDDLLRVLRGVE 325 (405)
T ss_pred hhccCcccceEEEEc-CHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHH----HHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999998 45566665554433 345778999999999764 33 4445556677888999999887
Q ss_pred CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 354 GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 354 gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
|+++.+|+||+|+|++++... .+..+++..+++++||.|.||+.|+...++++||+++. +++++++++++|+++
T Consensus 326 ~~~~~~p~gg~fl~~~l~~~~-----~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~-~~~~l~~al~rl~~~ 399 (405)
T PRK06207 326 GVFVRAPQAGSYLFPRLPRLA-----VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ-DHAAAVAAAERIAQL 399 (405)
T ss_pred CceecCCCeeEEEEEeCcccC-----CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 888888999999999998521 01336888888778999999999976667899999984 889999999999999
Q ss_pred HHHhh
Q 011570 434 MLKNV 438 (483)
Q Consensus 434 l~~~~ 438 (483)
+++.+
T Consensus 400 l~~~~ 404 (405)
T PRK06207 400 IERYR 404 (405)
T ss_pred HHHhh
Confidence 87653
No 11
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=5.6e-52 Score=425.46 Aligned_cols=364 Identities=20% Similarity=0.302 Sum_probs=290.6
Q ss_pred CCcccccchhh---hh-cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCc
Q 011570 46 NGVIQMGLAEN---LL-CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDR 121 (483)
Q Consensus 46 ~~~i~l~~~~n---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~ 121 (483)
.++++++++++ .+ +++.+.+.+.+.... ....+|++..|.++||+++|+|+.+.+| +.+++++
T Consensus 32 ~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~-----------~~~~~Y~~~~G~~~LReaia~~~~~~~g--~~~~~~~ 98 (433)
T PRK06855 32 VKITWENIGDPIAKGEKIPDWMKEIVAELVMD-----------DKSYGYCPTKGVLETREFLAELNNKRGG--AQITPDD 98 (433)
T ss_pred ccccccccCCCcccCCCCCHHHHHHHHHHhhc-----------CCCCCCCCCCCCHHHHHHHHHHHHhccC--CCCCHhH
Confidence 46788888876 23 345555555432110 1346799999999999999999998776 5688999
Q ss_pred EEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCcee
Q 011570 122 IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIK 201 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 201 (483)
|++|+|+++++..++. +++|||.|++++|+|+.|........|+++++++++++++|.+|+++|++++.+ +++++
T Consensus 99 I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~----~~~~~ 173 (433)
T PRK06855 99 IIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKY----NPSIA 173 (433)
T ss_pred EEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhc----CCCce
Confidence 9999999999999985 789999999999999987654333348899999988767899999999998863 13678
Q ss_pred EEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccC
Q 011570 202 GVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG 281 (483)
Q Consensus 202 ~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g 281 (483)
+++++|||||||.++|.+++++|+++|+++|++||+||+|.++.|.+ ..+.++.++.. ..++|+++||||.|+
T Consensus 174 ~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~-~~~~sl~~~~~------~~~~I~~~S~SK~~~ 246 (433)
T PRK06855 174 GILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNG-KKTVPLSEVIG------DVPGIALKGISKELP 246 (433)
T ss_pred EEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC-CCCCCHHHHcC------cCCeEEEecCccccC
Confidence 99999999999999999999999999999999999999999988876 55567776643 136799999999999
Q ss_pred CCCceEEEEEecC----hHHHHHHHHhh----hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 282 FPGFRVGIIYSYN----DQVVSCARKMS----SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 282 ~~GlRiG~li~~~----~~l~~~~~~~~----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
+||+|+||+++++ +.+...+.... ....+++++|.+++.++.++.+ ++++++.++.++++++.+.+.|++.
T Consensus 247 ~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~-~~~~~~~~~~~~~r~~~~~~~L~~~ 325 (433)
T PRK06855 247 WPGSRCGWIEVYNADKDEVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEY-KNYLKERNKRYEKRSNIAYEKLKDV 325 (433)
T ss_pred CCcceEEEEEEeCCchhhHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCCcH-HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999842 22232222221 1234678999999999987654 6788999999999999999999887
Q ss_pred -CceeecCCceEEEeeecCchhhc------------cC---------hHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEE
Q 011570 354 -GIGCLKSNAGLFLWMDLHHLLKE------------QT---------YEAEMALWRVIINEVKLNVSPGSSFHCPNPGWF 411 (483)
Q Consensus 354 -gi~~~~~~~g~f~~~~l~~~~~~------------~~---------~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~i 411 (483)
|+.+.+|+||||+|+++++.... .. .....+++..+++++||.+.||+.|+.. ..++
T Consensus 326 ~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~-~~~~ 404 (433)
T PRK06855 326 PGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTE-LNGF 404 (433)
T ss_pred CCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCC-CCce
Confidence 88888999999999999864200 00 0013477888888999999999999743 3459
Q ss_pred EEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 412 RVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 412 Ris~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
||+++..+++++++++++|++++++
T Consensus 405 Rls~~~~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 405 RVTLLERDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred EEEECCCcHHHHHHHHHHHHHHHHH
Confidence 9999877899999999999999875
No 12
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=3.4e-52 Score=422.71 Aligned_cols=351 Identities=23% Similarity=0.385 Sum_probs=286.0
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~ 123 (483)
.++|+|+.+.+..+ ++.+.+.+.+.... .....|++..|.++||+++|+|+.+.+| .+++++ +|+
T Consensus 32 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~g~~~lr~aia~~~~~~~g--~~~~~~~~i~ 98 (389)
T PRK08068 32 HDVINLGQGNPDQPTPEHIVEALQEAAEN-----------PANHKYSPFRGYPFLKEAAADFYKREYG--VTLDPETEVA 98 (389)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCccEE
Confidence 46799999976654 34455554431110 1246798889999999999999987776 557888 899
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.+++++||.|++++|+|+.|...++.. |++++.+|++++.+|.+|++++++.+.+ ++++|
T Consensus 99 it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~i~~~~~~~~~~d~~~l~~~~~~------~~~~v 171 (389)
T PRK08068 99 ILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALA-RAQFETMPLIAENNFLPDYTKIPEEVAE------KAKLM 171 (389)
T ss_pred EcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhc-CCEEEEeecccccCCCCCHHHHHHhccc------cceEE
Confidence 9999999999999999999999999999999999988876 9999999998766889999999988753 68999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
+++|||||||.++|.+++++|+++|++++++||+||+|.++.|++ ..+.++..... ..+++++++||||.||+|
T Consensus 172 ~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~-~~~~s~~~~~~-----~~~~~i~~~S~SK~~g~~ 245 (389)
T PRK08068 172 YLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDG-QKPVSFLQTPG-----AKDVGIELYTLSKTFNMA 245 (389)
T ss_pred EEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCC-CCCcChhhCCC-----ccCCEEEEecchhccCCc
Confidence 999999999999999999999999999999999999999877764 33345444322 346889999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhcC--CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSFG--LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
|+|+||+++ ++.+.+.+......+ +.+++.|.+++.++.++. +++++.++.++++++.+.+.|++.|+.+.+|.
T Consensus 246 GlRiG~~~~-~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~~ 321 (389)
T PRK08068 246 GWRVAFAVG-NESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQ---SCVAELVARYESRRNAFISACREIGWEVDAPK 321 (389)
T ss_pred cceeEeEec-CHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Confidence 999999998 556666665544432 234557887777775432 45778888999999999999999999888999
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
||+|+|++++...+ ..++++.+++++||.|+||..|+..+++++||+++ .+++.+.+++++|+++
T Consensus 322 g~~~~~v~~~~~~~------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 322 GSFFAWMPVPKGYT------SEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLL-TDEERLREAVERIGKL 386 (389)
T ss_pred eeEEEEEECCCCCC------HHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEc-CCHHHHHHHHHHHHHh
Confidence 99999999985322 34788888877899999999998666789999998 5778899999888753
No 13
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-52 Score=426.30 Aligned_cols=397 Identities=21% Similarity=0.321 Sum_probs=312.5
Q ss_pred ccccccchhhhhhhhhcCCCCCCCccchhhhhhhcCCCCCCCCCCCcccccchhhhh---cHHHHHHHHhcCCCCccccc
Q 011570 2 AFALSNQVQLLSKIAAGNGHGEDSPYFDGWKAFESDPYHPTKNPNGVIQMGLAENLL---CHELVEDWLMNNPKASICSA 78 (483)
Q Consensus 2 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~---~~~~~~~~~~~~~~~~~~~~ 78 (483)
||..++.+|+|+++..+ +........++................++|+.+.++. +.....+.+......
T Consensus 48 ay~~L~~~G~i~~~~gs---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~----- 119 (459)
T COG1167 48 AYEELEARGYIESRPGS---APPSGRPVRLELLKPSDPELLEDDPSVIDFAGGLPDPSLFPLEALRRALARVLRN----- 119 (459)
T ss_pred HHHHHHhCcceeeccCC---CcccccccccchhhhhhcccccCCCceecCCCCCCCcccCCHHHHHHHHHHHHhh-----
Confidence 79999999999999444 3322222222211111000001124567888776433 333444443321100
Q ss_pred cccccccc-cccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChH
Q 011570 79 EGLNEFKG-IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFD 157 (483)
Q Consensus 79 ~~~~~~~~-~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~ 157 (483)
.... ...|.++.|.++||++|++++....| +.+++++|++|+|+++++++++..+++|||+|++++|+|....
T Consensus 120 ----~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g--~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~ 193 (459)
T COG1167 120 ----YGASLALQYGPTAGLPELREAIAAYLLARRG--ISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGAL 193 (459)
T ss_pred ----cchhhhhcCCCCCCcHHHHHHHHHHHHHhcC--CccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHH
Confidence 0012 46788889999999999999996666 7789999999999999999999999999999999999999999
Q ss_pred HHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEe-CCCCCCcCCCCHHHHHHHHHHHhhcCcEEE
Q 011570 158 RDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLIT-NPSNPLGTFLDRETLKDIVSFINEKNIHLV 236 (483)
Q Consensus 158 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~-~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI 236 (483)
..++.+ |.++++||+|++| +|++.|++.++++ ++|+++++ +-|||||.+||.+++++|+++|++||++||
T Consensus 194 ~~~~~~-g~~~~~vp~d~~G---~~~e~le~~~~~~-----~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~II 264 (459)
T COG1167 194 QALEAL-GARVIPVPVDEDG---IDPEALEEALAQW-----KPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLII 264 (459)
T ss_pred HHHHHc-CCcEEecCCCCCC---CCHHHHHHHHhhc-----CCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEE
Confidence 999987 9999999999776 9999999999864 78877655 338999999999999999999999999999
Q ss_pred EccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--hcCCCChHH
Q 011570 237 CDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--SFGLVSSQT 314 (483)
Q Consensus 237 ~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--~~~~~s~~~ 314 (483)
+||+|+++.|+. .+..++..++ ..++||+++||||++. ||+|+||++++ +.+.+.+.... ....++.+.
T Consensus 265 EDD~y~el~~~~-~p~~~l~~ld------~~~rViy~gSFSK~l~-PglRlG~vv~p-~~~~~~~~~~k~~~~~~~s~~~ 335 (459)
T COG1167 265 EDDYYGELRYDG-PPPPPLKALD------APGRVIYLGSFSKTLA-PGLRLGYVVAP-PELIEKLLRLKQAADLGPSSLS 335 (459)
T ss_pred eeCcchhhhcCC-CCCCChHhhC------CCCCEEEEeeehhhcc-cccceeeeeCC-HHHHHHHHHHHHHhcCCCChHH
Confidence 999999998887 5555677664 3589999999999996 99999999995 45555443332 235588999
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC---CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHH
Q 011570 315 QHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV---GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIIN 391 (483)
Q Consensus 315 q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~---gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~ 391 (483)
|.+++..+.++. +++|+++.+..|+++++.+.+.|.+. ++++..|.||+|+|++++..++. ..+....++
T Consensus 336 Q~~la~~l~~G~-~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~~~------~~l~~~a~~ 408 (459)
T COG1167 336 QAALAAFLLSGH-YDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGIDA------RELLAAALE 408 (459)
T ss_pred HHHHHHHHHcCC-HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCCCH------HHHHHHHHH
Confidence 999999999554 58999999999999999999999997 47888999999999999986543 356666664
Q ss_pred hcCeEeeC-CCCCCCCC--CCEEEEEeccCCHHHHHHHHHHHHHHHHHhh
Q 011570 392 EVKLNVSP-GSSFHCPN--PGWFRVCFANMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 392 ~~gV~v~p-g~~f~~~~--~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+||.+.| |..|.... .+++||+|+..+++++++++++|.+++++..
T Consensus 409 -~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 409 -KGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred -CCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 5999999 98887654 4589999998899999999999999998764
No 14
>PLN02231 alanine transaminase
Probab=100.00 E-value=4.2e-51 Score=425.01 Aligned_cols=349 Identities=23% Similarity=0.374 Sum_probs=281.6
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-CCCCeEEEeCCCCcChHHHHhhhcC
Q 011570 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-DPGDAFLVPTPYYPGFDRDLRWRTG 165 (483)
Q Consensus 87 ~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~~~~~~~~~~~G 165 (483)
...|+++.|.++||++||+|+.+.+| +++++++|++|+|+++++..++.+++ .+||.|+++.|+|+.|...+... |
T Consensus 161 ~~~Y~~s~G~~~lReaIA~~~~~r~g--~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~-g 237 (534)
T PLN02231 161 TGAYSHSQGIKGLRDAIAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALH-G 237 (534)
T ss_pred ccCcCCCCCcHHHHHHHHHHHHhccC--CCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHc-C
Confidence 56799999999999999999998776 66899999999999999999999998 48999999999999999999886 9
Q ss_pred cEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc
Q 011570 166 VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV 245 (483)
Q Consensus 166 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~ 245 (483)
+++++++++++++|.+|+++|++++++...++.++|+|+++|||||||.+++.+++++|+++|+++|++||+||+|.+++
T Consensus 238 ~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~ 317 (534)
T PLN02231 238 GTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENV 317 (534)
T ss_pred CEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcc
Confidence 99999999877789999999999998765555578999999999999999999999999999999999999999999998
Q ss_pred cCCCCCcchHHHhhhhcccc-CCCeEEEEecCcccc-CCCCceEEEEEec--ChHHHHHHHHhhhc-CCCChHHHHHHHH
Q 011570 246 FTKESSFVSIAEIIDQDIAC-NRNLIHIVYSLSKDM-GFPGFRVGIIYSY--NDQVVSCARKMSSF-GLVSSQTQHLIAT 320 (483)
Q Consensus 246 ~~~~~~~~s~~~l~~~~~~~-~~~~vi~~~S~SK~~-g~~GlRiG~li~~--~~~l~~~~~~~~~~-~~~s~~~q~~~~~ 320 (483)
|+++..+.++.++...++.. ...++|+++||||.+ |++|+|+||+++. ++.+.+.+.+.... ...+.+.|.++..
T Consensus 318 y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~ 397 (534)
T PLN02231 318 YVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVASVNLCSNISGQILASL 397 (534)
T ss_pred cCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHhhhcCCChHHHHHHHH
Confidence 86324566776664321100 123689999999975 8999999999874 46666665554433 3345678888888
Q ss_pred hcCCh----hHHHHHH---HHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeec--Cch-hhcc---ChHHHHHHH
Q 011570 321 MLSDD----QFVEKFI---AESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDL--HHL-LKEQ---TYEAEMALW 386 (483)
Q Consensus 321 ~l~~~----~~~~~~~---~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l--~~~-~~~~---~~~~~~~~~ 386 (483)
++... ..++.+. +..++.++++++.+.+.|+++ |+.+.+|+||||+|+++ +.. .+.. ....+..++
T Consensus 398 ~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~ 477 (534)
T PLN02231 398 VMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYC 477 (534)
T ss_pred HhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHH
Confidence 88642 2234443 345788999999999999998 89999999999999655 321 1100 001133567
Q ss_pred HHHHHhcCeEeeCCCCCCCC-CCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhh
Q 011570 387 RVIINEVKLNVSPGSSFHCP-NPGWFRVCFANMDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 387 ~~Ll~~~gV~v~pg~~f~~~-~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
..|++++||.+.||+.|+.. +..++|++++ .++++++++++||++++++..+
T Consensus 478 ~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~-~~~e~l~eal~RL~~~~~~~~~ 530 (534)
T PLN02231 478 KRLLNATGIVVVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVSRLTEFHKSFMD 530 (534)
T ss_pred HHHHHhcCEEEeCCcccCCCCCCCeEEEEeC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 88998899999999999853 3457999996 6899999999999999888643
No 15
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=1.1e-51 Score=420.87 Aligned_cols=352 Identities=23% Similarity=0.415 Sum_probs=292.3
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~ 123 (483)
.++|+|+.+.+.++ ++.+.+.+.+... ....+|++..|.++||+++++++.+.+| +.++++ +|+
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~Lr~aia~~~~~~~g--~~~~~~~~I~ 119 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIR------------DGKNQYARGFGVPELNSAIAERFKKDTG--LVVDPEKEVT 119 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHh------------cCCCCcCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCCEE
Confidence 36899999988765 4555555543110 1235799999999999999999998777 567887 799
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.++++|||.|++++|+|+.|...++.. |++++.++++++ +|.+|++.|++.+.. ++|+|
T Consensus 120 vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~-~~~~~~~~l~~~~~~------~~k~i 191 (413)
T PLN00175 120 VTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMA-GAKIKTVTLRPP-DFAVPEDELKAAFTS------KTRAI 191 (413)
T ss_pred EeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHc-CCEEEEEECCcc-cCCCCHHHHHHhcCc------CceEE
Confidence 9999999999999999999999999999999999988886 999999999754 388999999998853 78999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
+++|||||||.++|.+++++|+++|++|+++||+||+|.++.|.+ . +.++.++.. ..+++|+++||||.||++
T Consensus 192 ~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~-~-~~s~~~~~~-----~~~~vi~i~SfSK~~~~~ 264 (413)
T PLN00175 192 LINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEG-D-HISMASLPG-----MYERTVTMNSLGKTFSLT 264 (413)
T ss_pred EecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCC-c-ccChhhCCC-----CcCcEEEEecchhhccCc
Confidence 999999999999999999999999999999999999999987764 2 346655532 347899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
|+|+||++++ +.+.+.+..... .+.++.+.|.+++.+|.++ +.++++.++.++++++.+.+.|.+.|+.+.+|+
T Consensus 265 G~RiG~~v~~-~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~ 340 (413)
T PLN00175 265 GWKIGWAIAP-PHLTWGVRQAHSFLTFATATPMQWAAVAALRAP---ESYYEELKRDYSAKKDILVEGLKEVGFKVYPSS 340 (413)
T ss_pred chheeeeEeC-HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Confidence 9999999995 555555544432 2558899999999999764 346788889999999999999999999999999
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC---CCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP---NPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~---~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
||+|+|++++... ...+.+++..|++++||.+.||+.|+.. +++++||+++ .+++++++++++|+++++
T Consensus 341 g~~f~~~~~~~~~----~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~-~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 341 GTYFVMVDHTPFG----FENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFC-KDEETLRAAVERMKTKLK 412 (413)
T ss_pred eeEEEEEeccccC----CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEc-CCHHHHHHHHHHHHHHHh
Confidence 9999999985310 1123478899998889999999998642 3579999998 489999999999998875
No 16
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=1.5e-51 Score=419.35 Aligned_cols=361 Identities=20% Similarity=0.378 Sum_probs=290.1
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RI 122 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i 122 (483)
+.++|+|+.++++++ ++.+.+.+...... .....|+++.|.++||+++|+++++.+| +.++++ +|
T Consensus 29 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~I 95 (405)
T PRK09148 29 GADIIDLGMGNPDLPTPQHIVDKLCETAQD-----------PRTHRYSASKGIPGLRRAQAAYYARRFG--VKLNPDTQV 95 (405)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHcC-----------cccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcE
Confidence 356799999988764 33333333321100 1246799999999999999999987777 557787 89
Q ss_pred EEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 123 VMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
++|+|+++++..++.+++++||+|++++|+|+.|...+... |+++++++++.+++|..+ +++.+... .+++++
T Consensus 96 ~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~~~---l~~~~~~~---~~~~~~ 168 (405)
T PRK09148 96 VATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMA-GGVIRSVPAEPDEEFFPA---LERAVRHS---IPKPIA 168 (405)
T ss_pred EEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhc-CCEEEEEeCCCCCCCccC---HHHHHhhc---cccceE
Confidence 99999999999999999999999999999999998888875 999999999766555444 44444321 237899
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
|+++|||||||.++|.+++++|+++|++||++||+||+|.++.|++ ..+.++.++.. ..+++|+++||||.||+
T Consensus 169 v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~-~~~~s~~~~~~-----~~~~~i~~~SfSK~~~~ 242 (405)
T PRK09148 169 LIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDG-NPPPSVLQVPG-----AKDVTVEFTSMSKTFSM 242 (405)
T ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCC-CCCCChhhCCC-----ccCcEEEEeccccccCC
Confidence 9999999999999999999999999999999999999999987765 44455555422 23678899999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecC
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKS 360 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~ 360 (483)
||+|+||+++ ++.+.+.+...... +.+++++|.++..++.+. ++++++.+..++++++.+.+.|+++|+.+..|
T Consensus 243 pGlR~G~~v~-~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~---~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p 318 (405)
T PRK09148 243 AGWRMGFAVG-NERLIAALTRVKSYLDYGAFTPIQVAATAALNGP---QDCIAEMRELYKKRRDVLVESFGRAGWDIPPP 318 (405)
T ss_pred cchheeeeeC-CHHHHHHHHHHHHHhccCCChHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHcCCccCCC
Confidence 9999999998 55666666555442 457889999999999753 34678888899999999999999999888889
Q ss_pred CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhh
Q 011570 361 NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 361 ~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
++|+|+|++++...... .+.+++..+++++||.|.||..|+...++|+||+++ .+++++.+++++|.+++++..+
T Consensus 319 ~~g~f~~~~l~~~~~~~---~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~-~~~~~l~~al~~l~~~l~~~~~ 393 (405)
T PRK09148 319 AASMFAWAPIPEAFRHL---GSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV-ENEQRIRQAARNIKRFLSSADE 393 (405)
T ss_pred CeeEEEEEECCCccCCC---CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998643211 134788888878899999999997655789999998 6899999999999999987654
No 17
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=1.5e-51 Score=418.92 Aligned_cols=354 Identities=21% Similarity=0.349 Sum_probs=285.6
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCC-cCCC-c
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRIT-FDPD-R 121 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~-~~~~-~ 121 (483)
..++|+|+.++++++ ++.+.+.+.+. +.....|+++.|.++||++||+|+.+++| ++ ++++ +
T Consensus 28 ~~~~i~l~~~~p~~~~~~~~~~~~~~~-------------~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~~~ 92 (396)
T PRK09147 28 DLPPISLSIGEPKHPTPAFIKDALAAN-------------LDGLASYPTTAGLPALREAIAAWLERRYG--LPALDPATQ 92 (396)
T ss_pred CCCeEecCCCCCCCCCCHHHHHHHHHH-------------hhhhcCCCCCCCCHHHHHHHHHHHHHHhC--CCcCCccce
Confidence 356799999998875 45555555431 12356799999999999999999988777 55 6775 8
Q ss_pred EEEeCChhHHHHHHHHHhcCC---CCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 122 IVMSGGATGAHETVAFCLADP---GDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~---gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
|++|+|+++++..++.++++| ||.|++++|+|+.|...++.. |++++++|++++++|.+|++.+++.+.+
T Consensus 93 i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~vp~~~~~~~~~d~~~l~~~~~~------ 165 (396)
T PRK09147 93 VLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLA-GAEPYFLNCDPANNFAPDFDAVPAEVWA------ 165 (396)
T ss_pred EEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhc-CCEEEEeccCccccCccCHHHHHHHHhh------
Confidence 999999999999999999999 899999999999999988876 9999999998777899999999887753
Q ss_pred ceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCcc
Q 011570 199 RIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSK 278 (483)
Q Consensus 199 ~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK 278 (483)
+++++++||||||||.++|.+++++|+++|++|+++||+||+|.++.|++.....+.......+.....+++|+++||||
T Consensus 166 ~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 245 (396)
T PRK09147 166 RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSK 245 (396)
T ss_pred ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEecccc
Confidence 78999999999999999999999999999999999999999999987765112222221111000002478999999999
Q ss_pred ccCCCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCce
Q 011570 279 DMGFPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIG 356 (483)
Q Consensus 279 ~~g~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~ 356 (483)
.||++|+|+||++++ +.+.+.+...... +.++++.|.++...+.... ++++.++.++++++.+.+.|.+. +.
T Consensus 246 ~~~~~GlRiG~~~~~-~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~----~~~~~~~~~~~~~~~~~~~L~~~-~~ 319 (396)
T PRK09147 246 RSNVPGLRSGFVAGD-AALLKKFLLYRTYHGCAMPPAVQAASIAAWNDEA----HVRENRALYREKFDAVTPILAPV-LD 319 (396)
T ss_pred ccCCccceeeeecCC-HHHHHHHHHHhhhcccCCCHHHHHHHHHHhcchh----HHHHHHHHHHHHHHHHHHHHHHh-cC
Confidence 999999999999995 5555555444432 4578889988777776543 56778889999999999999875 66
Q ss_pred eecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC------CCCCEEEEEeccCCHHHHHHHHHHH
Q 011570 357 CLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC------PNPGWFRVCFANMDDRTMEIALSRI 430 (483)
Q Consensus 357 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~------~~~~~iRis~~~~~~e~l~~~l~~L 430 (483)
+..|++|+|+|++++. + +.+++..+++++||.+.||+.|+. .+.+++||+++. +++++++++++|
T Consensus 320 ~~~p~~g~f~~~~~~~--~------~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~-~~~~l~~~l~rl 390 (396)
T PRK09147 320 VQLPDAGFYLWAKVPG--D------DTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA-PLAECVEAAERI 390 (396)
T ss_pred CCCCCeeEEEEEECCC--C------HHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC-CHHHHHHHHHHH
Confidence 7788999999999981 1 237888888888999999998863 235799999984 788999999999
Q ss_pred HHHHH
Q 011570 431 TSFML 435 (483)
Q Consensus 431 ~~~l~ 435 (483)
+++++
T Consensus 391 ~~~~~ 395 (396)
T PRK09147 391 VDFCR 395 (396)
T ss_pred HHHhc
Confidence 98774
No 18
>PLN02187 rooty/superroot1
Probab=100.00 E-value=2.6e-51 Score=422.37 Aligned_cols=363 Identities=19% Similarity=0.342 Sum_probs=289.9
Q ss_pred CCCcccccchhhhhc-----HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 45 PNGVIQMGLAENLLC-----HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
..++|+|+.+++.+. ++.+.+.+.+.... .....|++..|.++||++||+|+++.++ +.+++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lR~aiA~~~~~~~~--~~~~~ 131 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRS-----------GKGNSYGPGAGILPARRAVADYMNRDLP--HKLTP 131 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCChHHHHHHHHHHHHHhcC--CCCCc
Confidence 467899999977531 23333433321100 1235798899999999999999997766 56899
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
++|++|+|++++|.+++.++++|||.|++++|+|+.|...+... |++++.+++.++++|.+|++.|++++.+ +
T Consensus 132 ~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~-g~~~~~~~l~~~~~~~~d~~~l~~~~~~------~ 204 (462)
T PLN02187 132 EDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYS-GLEVRKFDLLPEKEWEIDLEGIEAIADE------N 204 (462)
T ss_pred ccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHc-CCEEEEEeCccccCCccCHHHHHHhcCC------C
Confidence 99999999999999999999999999999999999998888875 9999999987666899999999988753 6
Q ss_pred eeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccc
Q 011570 200 IKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKD 279 (483)
Q Consensus 200 ~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~ 279 (483)
+++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.|.+ ..+.++..+.. ..++|+++||||.
T Consensus 205 ~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~-~~~~s~~~~~~------~~~vi~l~SfSK~ 277 (462)
T PLN02187 205 TVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGD-NPFVSMGKFAS------IVPVLTLAGISKG 277 (462)
T ss_pred cEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCC-CCceeHHHhcc------CCcEEEEecchhh
Confidence 7899999999999999999999999999999999999999999988876 55556665532 2579999999999
Q ss_pred cCCCCceEEEEEecC-hHH---HHHHHHhhhcC----CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 011570 280 MGFPGFRVGIIYSYN-DQV---VSCARKMSSFG----LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLS 351 (483)
Q Consensus 280 ~g~~GlRiG~li~~~-~~l---~~~~~~~~~~~----~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~ 351 (483)
|++||+|+||+++++ +.+ .+.+......+ .++.+.|.++++++.+.. .+++++.++.++++++++.+.|+
T Consensus 278 f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~--~~~l~~~~~~l~~~r~~l~~~L~ 355 (462)
T PLN02187 278 WVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKAD--KNFFAKKNKILKHNVDLVCDRLK 355 (462)
T ss_pred cCCccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999843 332 23333333332 247899999999997532 45788889999999999999999
Q ss_pred cCCc-e-eecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHH
Q 011570 352 QVGI-G-CLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSR 429 (483)
Q Consensus 352 ~~gi-~-~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~ 429 (483)
+++. . +..|+||+|+|++++..... ...++.+++..+++++||.|.||+.|+ .++|+||+++ .+++.+++++++
T Consensus 356 ~~~~~~~~~~P~gg~fl~~~l~~~~~~-~~~~~~~~~~~ll~~~gV~v~pG~~fg--~~~~iRis~~-~~~e~l~~al~r 431 (462)
T PLN02187 356 DIPCVVCPKKPESCTYLLTKLELSLMD-NIKDDIDFCVKLAREENLVFLPGDALG--LKNWMRITIG-VEAHMLEDALER 431 (462)
T ss_pred hCCCCcCCCCCCEeEEEEeecChhhCC-CCCCHHHHHHHHHhhCCEEEECccccC--CCCeEEEEeC-CCHHHHHHHHHH
Confidence 8743 3 34688999999988632111 111234677888888999999999996 4689999998 578999999999
Q ss_pred HHHHHHHhhhc
Q 011570 430 ITSFMLKNVEA 440 (483)
Q Consensus 430 L~~~l~~~~~~ 440 (483)
|.+++++..+.
T Consensus 432 L~~~l~~~~~~ 442 (462)
T PLN02187 432 LKGFCTRHAKK 442 (462)
T ss_pred HHHHHHHhhhc
Confidence 99999877643
No 19
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=1.4e-51 Score=417.66 Aligned_cols=350 Identities=23% Similarity=0.379 Sum_probs=288.7
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~ 123 (483)
.++++|+.+++.+. ++.+.+.+.+.... ....+|+++.|.++||+++|+|+++.+| ++++++ +|+
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~~~~~vi 95 (383)
T TIGR03540 29 VDVISLGIGDPDLPTPKHIVEALCKAAEN-----------PENHRYPSYEGMLAYRQAVADWYKRRFG--VELDPETEVL 95 (383)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCCHHHHHHHHHHHHHhhC--CCCCCCCeEE
Confidence 46789999988865 44455544431110 1246799999999999999999997776 456776 699
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.+++++||.|++++|+|+.+...++.. |++++++|++++++|.+|++++++++.+ ++++|
T Consensus 96 ~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-G~~v~~v~~~~~~g~~~d~~~l~~~~~~------~~~~v 168 (383)
T TIGR03540 96 SLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFA-GGEPYEMPLKEENGFLPDFDAIPEDIAK------KAKLM 168 (383)
T ss_pred ECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhc-CCEEEEEecCcccCCccCHHHHHhhccc------cceEE
Confidence 9999999999999999999999999999999999988875 9999999998766788999999988753 78999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
+++|||||||.+++.+++++|+++|++||++||+||+|.++.|.+ ....++..+.. ..+++|+++||||.||++
T Consensus 169 ~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~-~~~~~~~~~~~-----~~~~~i~~~SfSK~~g~~ 242 (383)
T TIGR03540 169 FINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDG-YKAPSFLEVDG-----AKDVGIEFHSLSKTYNMT 242 (383)
T ss_pred EEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCC-CCCcCcccCCC-----cccCEEEEEecccccCCc
Confidence 999999999999999999999999999999999999999987765 44455555432 236789999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
|+|+||+++ ++.+.+.+...... ..++.+.|.++..++.+. .+++++.++.++++++.+.+.|.+.|+.+.+++
T Consensus 243 GlRiG~~i~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~ 318 (383)
T TIGR03540 243 GWRIGMAVG-NADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGP---QDVVKEIRKIYQRRRDLLLEALKKIGIDVEKPK 318 (383)
T ss_pred cceeeEEeC-CHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCC
Confidence 999999998 45565555444332 346778999998988764 355778888999999999999999999999999
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITS 432 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~ 432 (483)
+|+|+|++++...+ ..+++..+++++||.|+||+.|+..+++++||+++ .+++++.+++++|++
T Consensus 319 ~~~~~~~~l~~~~~------~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~-~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 319 ATFYVWVPVPEGYT------SAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLT-VPDERLEEAVARIKK 382 (383)
T ss_pred cceEEEEECCCCCC------HHHHHHHHHHHCCEEEecchhhCccCCCeEEEEec-CCHHHHHHHHHHHhh
Confidence 99999999985432 23788888888899999999997655789999998 588899999999865
No 20
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=2e-51 Score=430.28 Aligned_cols=331 Identities=22% Similarity=0.363 Sum_probs=273.4
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCc
Q 011570 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGV 166 (483)
Q Consensus 87 ~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~ 166 (483)
...|++..|.++||++||+|+.+..+ ..+++++|++|+|+++++.+++.+++++||.|++++|+|+.|...+... |+
T Consensus 178 ~~~Y~~~~G~~~lReaia~~~~~~~~--~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~-g~ 254 (517)
T PRK13355 178 TEGYSDSKGLFSARKAIMQYAQLKGL--PNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLA-GG 254 (517)
T ss_pred CCCCCCCcChHHHHHHHHHHHHhcCC--CCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHC-CC
Confidence 35799999999999999999976543 3478999999999999999999999999999999999999999988876 99
Q ss_pred EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCcc
Q 011570 167 QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVF 246 (483)
Q Consensus 167 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~ 246 (483)
+++.++++++++|.+|++++++++.. ++++|+++|||||||.+++.+++++|+++|++||++||+||+|.++.|
T Consensus 255 ~~v~~~~~~~~~~~~d~~~l~~~~~~------~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~ 328 (517)
T PRK13355 255 TAVHYRCDEQSEWYPDIDDIRSKITS------RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVM 328 (517)
T ss_pred EEEEeecCcccCCCCCHHHHHHhcCc------CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcC
Confidence 99999998777899999999998853 789999999999999999999999999999999999999999999888
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEec-ChH----HHHHHHHhhh-cCCCChHHHHHHHH
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSY-NDQ----VVSCARKMSS-FGLVSSQTQHLIAT 320 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~-~~~----l~~~~~~~~~-~~~~s~~~q~~~~~ 320 (483)
++ ..+.++.++.+ ...+++++||||.|+++|+|+||++++ +.. +.+.+..... ...++.++|.++..
T Consensus 329 ~~-~~~~s~~~~~~------~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~ 401 (517)
T PRK13355 329 DG-LEHTSIASLAP------DLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNMLANMRLCSNVPAQSIVQT 401 (517)
T ss_pred CC-CCcccHHHhCC------CCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHHhcCcCCcChHHHHHHHH
Confidence 76 55567776632 235778899999999999999999964 232 2322322222 24478899999999
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeC
Q 011570 321 MLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSP 399 (483)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~p 399 (483)
+|.......+++.+.++ +.++++++.+.|+++ |+++.+|+|+||+|++++.... ...++.+++..+++++||.|.|
T Consensus 402 aL~~~~~~~~~~~~~~~-~~~~r~~l~~~L~~~~g~~~~~p~g~fy~~~~l~~~~~--~~~~~~~~~~~ll~~~gV~v~p 478 (517)
T PRK13355 402 ALGGHQSVKDYLVPGGR-VYEQRELVYNALNAIPGISAVKPKAAFYIFPKIDVKKF--NIHDDEQFALDLLHDKKVLIVQ 478 (517)
T ss_pred HhcCCccHHHHHHHHHH-HHHHHHHHHHHHhcCCCcccCCCCeeeEEEeecCcccC--CCCCHHHHHHHHHHhCCEEEeC
Confidence 98754333555655443 445679999999988 8999999999999999874210 0112346788888889999999
Q ss_pred CCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 400 GSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 400 g~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
|+.|+...++||||+++ .+++++++++++|++++++.
T Consensus 479 g~~F~~~~~~~~Ris~~-~~~~~l~~a~~rl~~~~~~~ 515 (517)
T PRK13355 479 GTGFNWDKPDHFRVVYL-PRLEDLEDAMDRLADFFSYY 515 (517)
T ss_pred cchhCCCCcCEEEEEeC-CCHHHHHHHHHHHHHHHHHh
Confidence 99997667889999996 68999999999999999765
No 21
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=4.8e-51 Score=416.06 Aligned_cols=362 Identities=21% Similarity=0.346 Sum_probs=287.1
Q ss_pred CCCcccccchhhh----hc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 45 PNGVIQMGLAENL----LC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 45 ~~~~i~l~~~~n~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
..++|+|+.+++. ++ ++.+.+++.+.... .....|++..|.++||++||+|+.+.+| +++++
T Consensus 31 ~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~ 97 (409)
T PLN00143 31 HRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRS-----------AKFNSYAPTGGILPARRAIADYLSNDLP--YQLSP 97 (409)
T ss_pred CCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhC-----------cCCCCCCCCCCCHHHHHHHHHHHHhhcC--CCCCH
Confidence 4578999999886 43 55555554431110 1245798889999999999999988776 56789
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
++|++|+|+++++.+++.+++++||.|++++|+|+.|...+... |++++.++++++.+|.+|++.|++++.. +
T Consensus 98 ~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~ 170 (409)
T PLN00143 98 DDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFH-HLEIRHFDLLPEKGWEVDLDAVEAIADE------N 170 (409)
T ss_pred hhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHc-CCEEEEEeccCCCCCcCCHHHHHHhccc------C
Confidence 99999999999999999999999999999999999999888876 9999999986556799999999987753 6
Q ss_pred eeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccc
Q 011570 200 IKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKD 279 (483)
Q Consensus 200 ~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~ 279 (483)
+++++++|||||||.+++.+++++|+++|++++++||+||+|.++.|++ ..+.++..+. ..+++|+++||||.
T Consensus 171 ~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~-~~~~~~~~~~------~~~~vi~~~SfSK~ 243 (409)
T PLN00143 171 TIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGS-KPFVPMGLFA------SIVPVITLGSISKR 243 (409)
T ss_pred CEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCC-CCCcchhhhc------ccCcEEEEccchhh
Confidence 7899999999999999999999999999999999999999999988865 4444544442 24689999999999
Q ss_pred cCCCCceEEEEEec-ChHHH------HHHHHhhh-cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 011570 280 MGFPGFRVGIIYSY-NDQVV------SCARKMSS-FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLS 351 (483)
Q Consensus 280 ~g~~GlRiG~li~~-~~~l~------~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~ 351 (483)
|++||+|+||++++ ++.+. +.+..... ...++.++|.+++.++.+.. +.++++.++.++++++.+.+.|.
T Consensus 244 f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~L~ 321 (409)
T PLN00143 244 WMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTT--EDFFSKTINILRAALAFCYDKLK 321 (409)
T ss_pred cCCCccceEEEEeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcCh--HHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999994 33332 22222222 22357799999999987531 34567777788888888989998
Q ss_pred cCCc-e-eecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHH
Q 011570 352 QVGI-G-CLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSR 429 (483)
Q Consensus 352 ~~gi-~-~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~ 429 (483)
+++. . +..|+||+|+|++++..... ....+.+++..+++++||.+.||+.|+ .++|+||+++ .++++++++++|
T Consensus 322 ~~~~~~~~~~p~gg~f~w~~l~~~~~~-~~~~~~~~~~~ll~~~gV~v~pg~~f~--~~~~iRi~~~-~~~~~l~~al~r 397 (409)
T PLN00143 322 EIPCIMCPQKAEGAFFALVKLNLLLLE-DIEDDMEFCLKLAKEESLIILPGVTVG--LKNWLRITFA-VEQSSLEDGLGR 397 (409)
T ss_pred cCCCCCCCCCCCeeEEEEEecchhhcC-CCCCHHHHHHHHHHhCCEEEeCccccC--CCCeEEEEEc-CCHHHHHHHHHH
Confidence 8743 3 23688999999999752100 111234677788888899999999996 4689999998 579999999999
Q ss_pred HHHHHHHhhh
Q 011570 430 ITSFMLKNVE 439 (483)
Q Consensus 430 L~~~l~~~~~ 439 (483)
|++++++..+
T Consensus 398 l~~~l~~~~~ 407 (409)
T PLN00143 398 LKSFCGRHAK 407 (409)
T ss_pred HHHHHHHhcc
Confidence 9999987654
No 22
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-51 Score=415.48 Aligned_cols=350 Identities=23% Similarity=0.392 Sum_probs=287.9
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~ 123 (483)
.++++|+.++|++. ++.+.+.+.+.... .....|+++.|.++||+++|+|+++.+| ..++++ +|+
T Consensus 31 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~ii 97 (385)
T PRK09276 31 VDVISLGIGDPDLPTPDHIIEAMCKAVED-----------PENHQYPSYEGMLEFRKAVADWYKRRFG--VELDPETEVI 97 (385)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 45789999988775 44555555431110 1245799999999999999999997776 456777 599
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.+++++||.|++++|+|+.|...++.. |.+++.++++++.+|.+|++++++.+.+ ++++|
T Consensus 98 ~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~-g~~~~~v~~~~~~g~~~d~~~l~~~~~~------~~~~v 170 (385)
T PRK09276 98 SLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFA-GGEPYFMPLKEENGFLPDLDAIPEDVAK------KAKLM 170 (385)
T ss_pred EccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHc-CCEEEEEecCCCCCCcCCHHHHHHhccc------cceEE
Confidence 9999999999999999999999999999999999988876 9999999997666788999999887753 78999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++ ..+.++..+.. ..+++|+++||||.||++
T Consensus 171 ~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~-----~~~~~i~~~S~SK~~g~~ 244 (385)
T PRK09276 171 FINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDG-YKPPSFLEVPG-----AKDVGIEFHSLSKTYNMT 244 (385)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCC-CCCCChhccCC-----CcCCEEEEecchhhcCCc
Confidence 999999999999999999999999999999999999999987765 44456555432 246789999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
|+|+||+++ ++.+.+.+...... ..++.+.|.++..++.+. ..++++.++.++++++++.+.|++.|+++.+|.
T Consensus 245 GlRiG~~i~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 320 (385)
T PRK09276 245 GWRIGFAVG-NADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGP---QEVVEELRKIYQERRDILVEGLRKLGLEVEPPK 320 (385)
T ss_pred chhheeeeC-CHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCc---HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Confidence 999999998 45566655544332 335668888888888652 456778888999999999999999999888899
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITS 432 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~ 432 (483)
+|+|+|++++...+ ..+++..+++++||.|.||..|+..+++++||+++ .+++++.+++++|++
T Consensus 321 ~~~~~~v~~~~~~~------~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~-~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 321 ATFYVWAPVPKGYT------SAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT-VPDERIEEAVERIKK 384 (385)
T ss_pred cceEEEEECCCCCC------HHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC-CCHHHHHHHHHHHhh
Confidence 99999999986432 33788888888899999999997656789999998 588899999999864
No 23
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-51 Score=413.49 Aligned_cols=347 Identities=19% Similarity=0.385 Sum_probs=288.1
Q ss_pred CcccccchhhhhcH-H-HHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 47 GVIQMGLAENLLCH-E-LVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 47 ~~i~l~~~~n~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
++++|+.+++++++ + .+.+.+.... .....|+++.|.++||+++|+|+.+.+| +.+++++|++
T Consensus 30 ~~i~l~~g~p~~~~~~~~~~~~~~~~~-------------~~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~~~~i~i 94 (384)
T PRK06348 30 DIIDLSLGDPDLITDESIINAAFEDAK-------------KGHTRYTDSGGDVELIEEIIKYYSKNYD--LSFKRNEIMA 94 (384)
T ss_pred CcEEcCCCCCCCCCCHHHHHHHHHHHh-------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCChhhEEE
Confidence 57899999888753 2 2333332210 1346799999999999999999987776 5578999999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++.+++.+++++||+|++++|+|+.+...+... |.++++++++++++|.+|++.+++++++ ++++|+
T Consensus 95 t~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~ 167 (384)
T PRK06348 95 TVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMV-GGKPIILETYEEDGFQINVKKLEALITS------KTKAII 167 (384)
T ss_pred cCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHc-CCEEEEecCCcCcCCcCCHHHHHHhhCc------CccEEE
Confidence 999999999999999999999999999999999999886 9999999986566789999999998753 689999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
+++||||||.++|.+++++|+++|++++++||+||+|.++.|+. .+.++.++.. ..+++|+++||||++|+||
T Consensus 168 l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~-----~~~~vi~~~SfSK~~~l~G 240 (384)
T PRK06348 168 LNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE--DFVPMATLAG-----MPERTITFGSFSKDFAMTG 240 (384)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCC--CccchhhcCC-----CcCcEEEEecchhccCCcc
Confidence 99999999999999999999999999999999999999987764 2345555432 2478999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCC
Q 011570 285 FRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSN 361 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~ 361 (483)
+|+||+++ ++.+.+.+..... .+++++++|.+++.++... ++++++.++.++++++++.+.|... ++.+.+|+
T Consensus 241 lRiG~~v~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~ 316 (384)
T PRK06348 241 WRIGYVIA-PDYIIETAKIINEGICFSAPTISQRAAIYALKHR---DTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPK 316 (384)
T ss_pred ccceeeec-CHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCC
Confidence 99999999 4666666555443 2457889999999888753 4557778888999999999999887 78888999
Q ss_pred ceEEEeeecCc-hhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHH-LLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 362 ~g~f~~~~l~~-~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
||+|+|++++. ..+ ..+++..+++++||.|.||+.|+..+++++||+++ .+++++++++++|+++
T Consensus 317 gg~~~~~~~~~~~~~------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~-~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 317 GSIYAFINIKKTGLS------SVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT-VGIEVLEEAFNRIEKM 382 (384)
T ss_pred eeEEEEEecccCCCC------HHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec-CCHHHHHHHHHHHHhh
Confidence 99999999974 222 33788888888899999999998656789999998 5899999999999753
No 24
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=1.5e-51 Score=423.19 Aligned_cols=376 Identities=18% Similarity=0.221 Sum_probs=297.6
Q ss_pred ccccccchhhhhhhhhcCCCCCCCccchhhhhhhcCCCCCCCCCCCcccccchhhhhc-HHHHHHHHhcCCCCccccccc
Q 011570 2 AFALSNQVQLLSKIAAGNGHGEDSPYFDGWKAFESDPYHPTKNPNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEG 80 (483)
Q Consensus 2 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~ 80 (483)
||..|+++|+|..+ .|+|+ |+....... ..........+++|+.+.+..+ ++.+.+.+.+..
T Consensus 49 a~~~L~~~g~i~~~---~~~G~----~v~~~~~~~-~~~~~~~~~~~i~L~~g~p~~~~~p~~~~~~~~~~--------- 111 (431)
T PRK15481 49 AYKRLVTAGLAQSQ---GRNGT----VIRGSPSPV-ALEGGDPGTPLHDLAGGNPDPQRLPDLSRYFARLS--------- 111 (431)
T ss_pred HHHHHHHCCCEEEe---CCCce----EEccCcchh-hhcccCCcchhhhhhcCCCChhHhHHHHHHHHHhh---------
Confidence 79999999999988 77888 543211000 0000111235688988865544 244445444311
Q ss_pred cccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH
Q 011570 81 LNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL 160 (483)
Q Consensus 81 ~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~ 160 (483)
.....|+++.|.++||+++++|++...+ .+++|++|+|+++++.+++.++++|||.|++++|+|+.|...+
T Consensus 112 ----~~~~~Y~~~~g~~~lr~~ia~~~~~~~~-----~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~~ 182 (431)
T PRK15481 112 ----RTPRLYGDAPVSPELHAWAARWLRDDCP-----VAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINML 182 (431)
T ss_pred ----hhhhhcCCcCCCHHHHHHHHHHHhhccC-----CcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHH
Confidence 1235799999999999999999985322 3569999999999999999999999999999999999999999
Q ss_pred hhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEe-CCCCCCcCCCCHHHHHHHHHHHhhc-CcEEEEc
Q 011570 161 RWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLIT-NPSNPLGTFLDRETLKDIVSFINEK-NIHLVCD 238 (483)
Q Consensus 161 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~-~P~NPtG~~~~~~~l~~i~~~a~~~-~~~iI~D 238 (483)
+.. |++++++|+++++ +|++.|++++++ ++|+++++ |||||||.+++.+++++|+++|+++ +++||+|
T Consensus 183 ~~~-g~~~~~v~~~~~g---~~~~~l~~~~~~------~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~D 252 (431)
T PRK15481 183 RYA-GFSASPVSVDAEG---MQPEKLERALAQ------GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIID 252 (431)
T ss_pred HHc-CCeEEeeccCCCC---CCHHHHHHHHhc------CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEec
Confidence 986 9999999997543 889999998864 67888887 9999999999999999999999999 9999999
Q ss_pred cccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHH
Q 011570 239 EIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQH 316 (483)
Q Consensus 239 eay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~ 316 (483)
|+|.++.+.. . .+.... ..+++|+++||||+|| ||+|+||++++ +.+.+.+...... ..++.++|.
T Consensus 253 e~Y~~~~~~~-~--~~~~~~-------~~~~vi~~~SfSK~~~-~GlRiG~~i~~-~~~~~~~~~~~~~~~~~~s~~~q~ 320 (431)
T PRK15481 253 DHFALLSSSP-Y--HSVIPQ-------TTQRWALIRSVSKALG-PDLRLAFVASD-SATSARLRLRLNSGTQWVSHLLQD 320 (431)
T ss_pred CchhhhccCC-C--CCCCcC-------CCCCEEEEeeeccccC-CCceeEEEeCC-HHHHHHHHHHHhccccCCCHHHHH
Confidence 9999875533 1 222211 2368999999999999 99999999994 5555555443332 347899999
Q ss_pred HHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeE
Q 011570 317 LIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLN 396 (483)
Q Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~ 396 (483)
+++.+|.++.+ .+++++.++.++++++.+.+.|.+.|+.+..|+||+|+|++++.. ..+++..+. ++||.
T Consensus 321 a~~~~l~~~~~-~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p~gg~f~~~~l~~~--------~~~~~~~l~-~~gV~ 390 (431)
T PRK15481 321 LVYACLTDPEY-QARLAQARLFYAQRRQKLARALQQYGIAIPSPGDGLNLWLPLDTD--------SQATALTLA-KSGWL 390 (431)
T ss_pred HHHHHHhCccH-HHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCeEEEEEECCCC--------HHHHHHHHH-HCCcE
Confidence 99999998765 677889999999999999999999998887899999999999741 236677766 57999
Q ss_pred eeCCCCCCCC-CCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 397 VSPGSSFHCP-NPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 397 v~pg~~f~~~-~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
|.||+.|+.. ..+++||+++..+++++++++++|++++.
T Consensus 391 v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 391 VREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred EecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 9999999653 24689999997789999999999998874
No 25
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=3.2e-51 Score=414.22 Aligned_cols=353 Identities=23% Similarity=0.424 Sum_probs=291.3
Q ss_pred CCcccccchhhhhcH-HHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cEE
Q 011570 46 NGVIQMGLAENLLCH-ELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~ 123 (483)
.++|+|+.++|++++ +.+.+.+.+... .....|++..|.++||+++|+|+++.+| +.++++ +|+
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~~i~ 85 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLE------------QGYTSYTANAGLLELRQEIAKYLKKRFA--VSYDPNDEII 85 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 467999999988753 334444332100 1245798889999999999999998777 556776 799
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++.+++.++++|||.|++++|+|+.|...++.. |.++++++++.+++|.+|++.+++++.+ ++++|
T Consensus 86 ~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v 158 (378)
T PRK07682 86 VTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLA-GGVPVPVATTLENEFKVQPAQIEAAITA------KTKAI 158 (378)
T ss_pred EeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHHc-CCEEEEeecCCccCCCCCHHHHHhhcCc------ccEEE
Confidence 9999999999999999999999999999999999888876 9999999987656789999999998754 78999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
+++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++ . +.++..+.. ..+++++++||||.||+|
T Consensus 159 ~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~-~~~~~~~~~-----~~~~~i~~~S~SK~~~~~ 231 (378)
T PRK07682 159 LLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDE-A-YTSFASIKG-----MRERTILISGFSKGFAMT 231 (378)
T ss_pred EEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCC-C-CCChhhccc-----ccCCEEEEecCcccccCh
Confidence 999999999999999999999999999999999999999987764 2 345544432 246899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
|+|+||+++ ++.+.+.+..... .+.+++++|.++..+|++.. .++++.++.++++++.+.+.|+++|+++..|+
T Consensus 232 GlR~G~~~~-~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~ 307 (378)
T PRK07682 232 GWRLGFIAA-PVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGN---DDVIRMRDSYRKRRNFFVTSFNEIGLTCHVPG 307 (378)
T ss_pred hhhhhhhhc-CHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Confidence 999999999 4556665544332 24578899999999997643 24677888899999999999999999989999
Q ss_pred ceEEEeeecCc-hhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 362 AGLFLWMDLHH-LLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 362 ~g~f~~~~l~~-~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
||+|+|++++. ..+ ..+++..+++++||.|.||..|+...++++||+++. +++++++++++|++++++.
T Consensus 308 g~~~~~~~~~~~~~~------~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 308 GAFYAFPSISSTGLS------SEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred eeEEEEEeccCCCCC------HHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHhhc
Confidence 99999998853 111 347888888778999999999976567899999984 7899999999999988653
No 26
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.2e-50 Score=414.75 Aligned_cols=363 Identities=22% Similarity=0.383 Sum_probs=292.9
Q ss_pred CCCcccccchhhh----hc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 45 PNGVIQMGLAENL----LC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 45 ~~~~i~l~~~~n~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
..++|+|+.+++. +. ++.+.+++.+... ....+.|++..|.++||+++|+++++.++ .++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~-----------~~~~~~Y~~~~G~~~lr~aia~~~~~~~~--~~~~~ 117 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALR-----------SGKYNSYSTCVGLLPARRAIAEYLSRDLP--YELST 117 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHH-----------cCcCCCCCCCccCHHHHHHHHHHHhhccC--CCCCh
Confidence 4578999999874 22 3444444433100 01245799999999999999999987766 56789
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
++|++|+|+++++.+++.++++|||+|+++.|+|+.|...+... |++++.+++.++.+|.+|++.+++.+.+ +
T Consensus 118 ~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~ 190 (430)
T PLN00145 118 DDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFS-GLEVRHFDLLPERGWEVDLEGVEALADE------N 190 (430)
T ss_pred hhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHc-CCEEEEeeCCcccCCcCCHHHHHHHhCc------C
Confidence 99999999999999999999999999999999999998887775 9999999987667899999999988754 7
Q ss_pred eeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccc
Q 011570 200 IKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKD 279 (483)
Q Consensus 200 ~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~ 279 (483)
+++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++ ..+.++..+. ...++|+++||||.
T Consensus 191 ~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~-~~~~~~~~~~------~~~~vi~~~S~SK~ 263 (430)
T PLN00145 191 TVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGS-KPFVPMGVFG------EVAPVLTLGSISKR 263 (430)
T ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCC-CCccchhhhc------ccCcEEEEeccccc
Confidence 8999999999999999999999999999999999999999999988876 5556665553 24689999999999
Q ss_pred cCCCCceEEEEEec-ChHHHH------HHHHhhhc-CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 011570 280 MGFPGFRVGIIYSY-NDQVVS------CARKMSSF-GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLS 351 (483)
Q Consensus 280 ~g~~GlRiG~li~~-~~~l~~------~~~~~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~ 351 (483)
|++||||+||++++ ++.+.+ .+...... ..++++.|.++..+|.... +.+.++.++.++++++.+.+.|.
T Consensus 264 ~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~L~ 341 (430)
T PLN00145 264 WVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANTK--EEFFTKTLGLLKETADICYEKIK 341 (430)
T ss_pred cCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999983 333322 22223222 2357789999999997632 45678888899999999999999
Q ss_pred cC-Ccee-ecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHH
Q 011570 352 QV-GIGC-LKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSR 429 (483)
Q Consensus 352 ~~-gi~~-~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~ 429 (483)
++ |+.+ ..|+|++|+|++++..... ...++.+++..|++++||.+.||+.|+. ++|+||+|+ .+++.+++++++
T Consensus 342 ~~~g~~~~~~P~ga~y~~v~l~~~~~~-~~~~~~~~~~~ll~~~gV~v~pG~~fg~--~~~lRis~~-~~~~~l~~al~r 417 (430)
T PLN00145 342 EIKCITCPHKPEGSMFVMVKLDLSCLS-GIKDDMDFCCKLAKEESVVVLPGSALGM--KNWLRITFA-IDPPSLEDGLER 417 (430)
T ss_pred cCCCCCCCcCCCeeeEEEeccChhhcC-CCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEEeC-CCHHHHHHHHHH
Confidence 87 7775 4799999999999742100 0112447888999999999999999974 689999998 588999999999
Q ss_pred HHHHHHHhhhc
Q 011570 430 ITSFMLKNVEA 440 (483)
Q Consensus 430 L~~~l~~~~~~ 440 (483)
|++++.+..+.
T Consensus 418 l~~~~~~~~~~ 428 (430)
T PLN00145 418 LKSFCLRHAKL 428 (430)
T ss_pred HHHHHHHhccc
Confidence 99999887643
No 27
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=1.5e-50 Score=412.71 Aligned_cols=365 Identities=22% Similarity=0.379 Sum_probs=294.4
Q ss_pred CCCCCCCcccccchhhh----h-cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCC
Q 011570 41 PTKNPNGVIQMGLAENL----L-CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRI 115 (483)
Q Consensus 41 ~~~~~~~~i~l~~~~n~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~ 115 (483)
...++.++|+|+++++. + +++.+.+++.+.... .....|++..|.++||+++++|++..+| +
T Consensus 26 ~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~ 92 (409)
T PLN02656 26 DEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQS-----------NKFNGYAPTVGLPQARRAIAEYLSRDLP--Y 92 (409)
T ss_pred ccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCCCCHHHHHHHHHHHHHhcC--C
Confidence 34567889999999986 3 345555554431110 1346799989999999999999998766 5
Q ss_pred CcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 116 TFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 116 ~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
.+++++|++|+|+++++..++.+++++||+|++++|+|+.|....... |++++.++++++.+|.+|++.+++++.+
T Consensus 93 ~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~i~~~~~~~~~~d~~~l~~~~~~--- 168 (409)
T PLN02656 93 KLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFR-HLEVRYVDLLPEKGWEVDLDAVEALADQ--- 168 (409)
T ss_pred CCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHc-CCEEEEEeCCCcCCCCCCHHHHHHHhcc---
Confidence 578999999999999999999999999999999999999998877775 9999999987656789999999988753
Q ss_pred cCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEec
Q 011570 196 SNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYS 275 (483)
Q Consensus 196 ~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S 275 (483)
++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++ ..+.++..+. ...++|+++|
T Consensus 169 ---~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~------~~~~vi~~~S 238 (409)
T PLN02656 169 ---NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGS-NPFVPMGVFG------SIVPVLTLGS 238 (409)
T ss_pred ---CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCC-CCcccHHHhc------ccCcEEEEcc
Confidence 67899999999999999999999999999999999999999999988876 4445555542 2468999999
Q ss_pred CccccCCCCceEEEEEecC-------hHHHHHHHHhhh-cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHH
Q 011570 276 LSKDMGFPGFRVGIIYSYN-------DQVVSCARKMSS-FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFT 347 (483)
Q Consensus 276 ~SK~~g~~GlRiG~li~~~-------~~l~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~ 347 (483)
|||.|++||+|+||+++++ ..+.+.+..... ...++.++|.+++.++.+.. +.++++.++.++++++.+.
T Consensus 239 fSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~--~~~~~~~~~~~~~~r~~~~ 316 (409)
T PLN02656 239 LSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTD--ESFFKKTINILKQSSDICC 316 (409)
T ss_pred cchhccCcceeEEEEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999952 356655554433 34578899999999997532 4567888889999999999
Q ss_pred HhhhcC-Cce-eecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHH
Q 011570 348 WGLSQV-GIG-CLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEI 425 (483)
Q Consensus 348 ~~L~~~-gi~-~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~ 425 (483)
+.|+++ ++. +..|+||+|+|++++..... ....+.+++..+++++||.|.||+.|+ .++|+||+++ .+++++++
T Consensus 317 ~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~-~~~~~~~~~~~~l~~~gV~v~pg~~fg--~~~~iRi~~~-~~~e~l~e 392 (409)
T PLN02656 317 DRIKEIPCITCPHKPEGSMAVMVKLNLSLLE-DISDDIDFCFKLAREESVIILPGTAVG--LKNWLRITFA-ADPSSLEE 392 (409)
T ss_pred HHHhhCCCCcCCcCCCeEEEEEEecchhhcC-CCCCHHHHHHHHHHhCCEEEecchhcC--CCCeEEEEeC-CCHHHHHH
Confidence 999887 333 35789999999999742110 001123566677778899999999996 3689999999 48999999
Q ss_pred HHHHHHHHHHHhh
Q 011570 426 ALSRITSFMLKNV 438 (483)
Q Consensus 426 ~l~~L~~~l~~~~ 438 (483)
++++|++++.+..
T Consensus 393 al~rl~~~~~~~~ 405 (409)
T PLN02656 393 ALGRIKSFYLRHS 405 (409)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988664
No 28
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-50 Score=412.31 Aligned_cols=350 Identities=23% Similarity=0.379 Sum_probs=284.8
Q ss_pred CCcccccchhhhhcH-H-HHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cE
Q 011570 46 NGVIQMGLAENLLCH-E-LVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RI 122 (483)
Q Consensus 46 ~~~i~l~~~~n~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i 122 (483)
.++++|+.+.+..++ . ..+........ .....|+++.|.++||+++|+|+++.+| ++++++ +|
T Consensus 35 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~aia~~~~~~~~--~~~~~~~~i 100 (394)
T PRK05942 35 LDLIDLGMGNPDGAAPQPVIEAAIAALAD------------PQNHGYPPFEGTASFRQAITDWYHRRYG--VELDPDSEA 100 (394)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhC------------CCCccCCCCCCCHHHHHHHHHHHHHHHC--CCcCCCCeE
Confidence 457899987554432 2 33333322100 1246799999999999999999998766 557888 49
Q ss_pred EEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 123 VMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
++|+|+++++..++.++++|||+|++++|+|+.+...+... |+++++++++.+++|.+|++++++.+.+ ++|+
T Consensus 101 ~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~ 173 (394)
T PRK05942 101 LPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIA-GAQIYPIILKPENDWLIDLSSIPEEVAQ------QAKI 173 (394)
T ss_pred EEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHc-CCEEEEeecCCccCCccCHHHHHHhccc------cceE
Confidence 99999999999999999999999999999999998888775 9999999998777899999999988753 7899
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
|+++|||||||.++|.+++++|+++|+++|++||+||+|.++.+++ ..+.++.++.. ..+.+|+++||||.||+
T Consensus 174 i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~-~~~~~~~~~~~-----~~~~~i~~~SfSK~~~~ 247 (394)
T PRK05942 174 LYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDG-YQPTSLLEIPG-----AKDIGVEFHTLSKTYNM 247 (394)
T ss_pred EEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCC-CCCCChhhCCC-----ccccEEEEecchhccCC
Confidence 9999999999999999999999999999999999999999987765 44455555422 23567889999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecC
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKS 360 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~ 360 (483)
+|+|+||+++ ++.+.+.+..... .+.+++++|.++..+++.. ++++++.++.++++++++.+.|.+.|+.+.++
T Consensus 248 ~GlRiG~i~~-~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~ 323 (394)
T PRK05942 248 AGWRVGFVVG-NRHIIQGLRTLKTNLDYGIFSALQKAAETALQLP---DSYLQQVQERYRTRRDFLIQGLGELGWNIPPT 323 (394)
T ss_pred hhhheeeeec-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC
Confidence 9999999998 5566666655443 2457788999999998642 45678888999999999999999889988899
Q ss_pred CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 361 NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 361 ~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
++|+|+|++++...+ ..+++.++++++||.|.||+.|+..+++|+||+++ .+.+.+.+++++|.++
T Consensus 324 ~~~~f~~~~~~~~~~------~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~-~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 324 KATMYLWVPCPVGMG------STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI-ADCDRLGEALDRLKQA 389 (394)
T ss_pred CeeeEEEEECCCCCC------HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec-CCHHHHHHHHHHHHHh
Confidence 999999999985332 23667778888899999999997656789999998 4778888888888653
No 29
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.7e-50 Score=410.87 Aligned_cols=353 Identities=22% Similarity=0.354 Sum_probs=282.8
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~ 123 (483)
.++++|+.|+|++. ++.+.+++... ......|+++.|.++||+++|+|+.+.+|....++++ +|+
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~-------------~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~ 94 (393)
T TIGR03538 28 KPPIALSIGEPKHPTPAFVLEALREN-------------LHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVL 94 (393)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHH-------------hhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEE
Confidence 56799999998875 45566665542 1234679999999999999999998877732226785 899
Q ss_pred EeCChhHHHHHHHHHhcCCCCe--EEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCcee
Q 011570 124 MSGGATGAHETVAFCLADPGDA--FLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIK 201 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~--Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 201 (483)
+|+|+++++..++.++++|||. |++++|+|+.|...++.. |++++.++++++++|.+|++++++++.+ ++|
T Consensus 95 it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k 167 (393)
T TIGR03538 95 PVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLA-GAEPYFLNCTAENGFLPDFDAVPESVWR------RCQ 167 (393)
T ss_pred ECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhc-CCeEEEeeccccCCCCCCHHHHHHHHhh------cce
Confidence 9999999999999999999986 999999999999888875 9999999998777899999999988764 789
Q ss_pred EEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccC
Q 011570 202 GVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG 281 (483)
Q Consensus 202 ~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g 281 (483)
+|+++|||||||.+++.+++++|+++|++||++||+||+|.++.+.+...+.+.............+++|+++||||.|+
T Consensus 168 ~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 247 (393)
T TIGR03538 168 LLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSN 247 (393)
T ss_pred EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcC
Confidence 99999999999999999999999999999999999999999877653112233322111010013478999999999999
Q ss_pred CCCceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeec
Q 011570 282 FPGFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLK 359 (483)
Q Consensus 282 ~~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~ 359 (483)
++|+|+||++++ +.+.+.+..... ...++++.|.++...+.+. +++++.++.++++++.+.+.|++. +.+..
T Consensus 248 ~~GlRvG~~i~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~ 321 (393)
T TIGR03538 248 LPGLRSGFVAGD-AEILKAFLRYRTYHGCAMPIPTQLASIAAWNDE----QHVRENRALYREKFAAVLEILGQV-LDLEL 321 (393)
T ss_pred CcccceEEEecC-HHHHHHHHHHHHhhccCcCHHHHHHHHHHhcCh----HHHHHHHHHHHHHHHHHHHHHHhh-CcccC
Confidence 999999999995 555555544443 2347888999887777653 346778888999999999999875 56678
Q ss_pred CCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC------CCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 360 SNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC------PNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 360 ~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~------~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
|.||+|+|++++. + ..+++..+++++||.|.||+.|+. .+.+++||+++. +++++++++++|+++
T Consensus 322 p~gg~f~~~~~~~--~------~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 322 PDAGFYLWPKVPG--D------DEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA-PLEECVEAAERIRSF 392 (393)
T ss_pred CCeeEEEEEECCC--C------HHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC-CHHHHHHHHHHHHHh
Confidence 9999999999981 1 236888888888999999998862 235799999984 789999999999875
No 30
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-50 Score=412.47 Aligned_cols=357 Identities=21% Similarity=0.318 Sum_probs=289.8
Q ss_pred CCCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCC-cCCC-
Q 011570 44 NPNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRIT-FDPD- 120 (483)
Q Consensus 44 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~-~~~~- 120 (483)
.+.++++|+.++|++. ++.+.+.+.+.... .....|++ .|.++||+++|+|+.+.+| +. ++++
T Consensus 42 ~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~-----------~~~~~Y~~-~G~~~lr~aia~~~~~~~g--~~~~~~~~ 107 (410)
T PRK06290 42 PDMELIDMGVGEPDEMADESVVEVLCEEAKK-----------PENRGYAD-NGIQEFKEAAARYMEKVFG--VKDIDPVT 107 (410)
T ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCC-CCcHHHHHHHHHHHHHHcC--CCcCCCcc
Confidence 3456899999999875 44455544431100 12346875 7999999999999988766 55 7786
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
+|++|+|+++++..++.+++++||.|+++.|+|+.|...++.. |+++++++++++++|.+|++.+++++.+ ++
T Consensus 108 ~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~~d~~~l~~~~~~------~~ 180 (410)
T PRK06290 108 EVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYY-GGEVYNLPLLEENNFLPDLDSIPKDIKE------KA 180 (410)
T ss_pred eEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHc-CCEEEEEecCCCcCCcCCHHHHHHhhcc------cc
Confidence 7999999999999999999999999999999999999988886 9999999998877899999999988753 78
Q ss_pred eEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCcccc
Q 011570 201 KGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDM 280 (483)
Q Consensus 201 ~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~ 280 (483)
++|+++|||||||.++|.+++++|+++|++||++||+||+|.++.|++ . +.++.++.. ..+++|+++||||.|
T Consensus 181 k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~-~-~~s~~~~~~-----~~~~~I~i~SfSK~~ 253 (410)
T PRK06290 181 KLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDG-K-PLSFLSVPG-----AKEVGVEIHSLSKAY 253 (410)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCC-C-CcChhcCCC-----ccccEEEEeechhhc
Confidence 999999999999999999999999999999999999999999987754 2 245554432 246789999999999
Q ss_pred CCCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceee
Q 011570 281 GFPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCL 358 (483)
Q Consensus 281 g~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~ 358 (483)
|+||+|+||+++ ++.+.+.+...... .+++.++|.++..++.+..+ +++.++.++++++.+.+.|++.|+.+.
T Consensus 254 g~~GlRiG~ii~-~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~ 328 (410)
T PRK06290 254 NMTGWRLAFVVG-NELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEI----TEKIREKYSRRLDKLVKILNEVGFKAE 328 (410)
T ss_pred CCchhheEeEEe-CHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcHH----HHHHHHHHHHHHHHHHHHHHhCCCeec
Confidence 999999999999 55566665554433 33456899999999987544 567788889999999999999999999
Q ss_pred cCCceEEEeeecCchhhc-cChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc--CCHHHHHHHHHHHHHHHH
Q 011570 359 KSNAGLFLWMDLHHLLKE-QTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN--MDDRTMEIALSRITSFML 435 (483)
Q Consensus 359 ~~~~g~f~~~~l~~~~~~-~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~--~~~e~l~~~l~~L~~~l~ 435 (483)
+|+||+|+|++++..... ....+..++++.|+++.+|.+.||+.|+ +|+||+++. .++++.++++++|++.+.
T Consensus 329 ~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~----~~lRi~~~~~~~~~~~~~~~~~~l~~~~~ 404 (410)
T PRK06290 329 MPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAG----HFLRFSVTFEAKDEEEEDRILEEIKRRLS 404 (410)
T ss_pred CCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCcccc----CeEEEEEEcccccccchhHHHHHHHHHHh
Confidence 999999999999864311 0011245789999988788888988663 699999985 378899999999999887
Q ss_pred Hh
Q 011570 436 KN 437 (483)
Q Consensus 436 ~~ 437 (483)
+.
T Consensus 405 ~~ 406 (410)
T PRK06290 405 DV 406 (410)
T ss_pred hc
Confidence 64
No 31
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=1.9e-50 Score=412.48 Aligned_cols=364 Identities=22% Similarity=0.392 Sum_probs=295.1
Q ss_pred CCCCcccccchhhh-----hcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhC----CC
Q 011570 44 NPNGVIQMGLAENL-----LCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRG----NR 114 (483)
Q Consensus 44 ~~~~~i~l~~~~n~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g----~~ 114 (483)
+..++|+|+.+.+. .+++.+.+++.+.... .....|+++.|.++||++||+|+++.++ .+
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~-----------~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~ 99 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDS-----------QECNGYPPTVGSPEAREAVATYWRNSFVHKESLK 99 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhc-----------CCCCCCCCCCCcHHHHHHHHHHHHhhcccccccc
Confidence 55688999999875 3456666665442110 1346799999999999999999987542 12
Q ss_pred CCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 115 ITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 115 ~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
..+++++|++|+|+++++.+++.+++++||+|+++.|+|..+...++.. |++++.++++++.+|.+|++.+++++.+
T Consensus 100 ~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~i~~~~~~~~~~d~~~l~~~~~~-- 176 (412)
T PTZ00433 100 STIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAY-GIEMRFYNCRPEKDWEADLDEIRRLVDD-- 176 (412)
T ss_pred CCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHc-CCEEEEEecCccccCcCCHHHHHHHhcc--
Confidence 4578999999999999999999999999999999999999999988886 9999999997666789999999988754
Q ss_pred hcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEe
Q 011570 195 ESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVY 274 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~ 274 (483)
++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|.+ ..+.++..+.. ..++|+++
T Consensus 177 ----~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~------~~~~i~~~ 245 (412)
T PTZ00433 177 ----RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNG-ATFTSVADFDT------TVPRVILG 245 (412)
T ss_pred ----CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCC-CCccchhhccC------CCceEEEc
Confidence 68999999999999999999999999999999999999999999987765 44456655532 23578999
Q ss_pred cCccccCCCCceEEEEEec-C----hHHHHHHHHhhh-cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHH
Q 011570 275 SLSKDMGFPGFRVGIIYSY-N----DQVVSCARKMSS-FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTW 348 (483)
Q Consensus 275 S~SK~~g~~GlRiG~li~~-~----~~l~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~ 348 (483)
||||.||+||+|+||+++. + +.+.+.+..... .+.+++++|.+++.++.+. .+.++++.++.++++++.+.+
T Consensus 246 SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~r~~l~~ 323 (412)
T PTZ00433 246 GTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLVCGPCSVVQAALGEALLNT--PQEHLEQIVAKLEEGAMVLYN 323 (412)
T ss_pred cchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhccCCCChHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999972 2 345555544433 3468999999999888763 155688888899999999999
Q ss_pred hhhcC-CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHH
Q 011570 349 GLSQV-GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIAL 427 (483)
Q Consensus 349 ~L~~~-gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l 427 (483)
.|++. |+.+.+|+||+|+|++++...-. ......++++.+++++||.|.||+.|+. ++++||+++ ..++++++++
T Consensus 324 ~L~~~~~~~~~~p~gg~f~~~~l~~~~~~-~~~~~~~~~~~ll~~~gV~v~pg~~f~~--~~~iRis~~-~~~e~l~~al 399 (412)
T PTZ00433 324 HIGECIGLSPTMPRGSMFLMSRLDLEKFR-DIKSDVEFYEKLLEEENVQVLPGEIFHM--PGFTRLTIS-RPVEVLREAV 399 (412)
T ss_pred HHhcCCCCcccCCCeeEEEEEEechhhcC-CCCCHHHHHHHHHHhcCEEEeCccccCC--CCeEEEEec-CCHHHHHHHH
Confidence 99886 78888999999999998742100 0011347888888778999999999963 679999998 4788999999
Q ss_pred HHHHHHHHHhh
Q 011570 428 SRITSFMLKNV 438 (483)
Q Consensus 428 ~~L~~~l~~~~ 438 (483)
++|.+++++.+
T Consensus 400 ~~l~~~~~~~~ 410 (412)
T PTZ00433 400 ERIKAFCERHK 410 (412)
T ss_pred HHHHHHHHHhc
Confidence 99999998654
No 32
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=2.6e-50 Score=407.87 Aligned_cols=349 Identities=19% Similarity=0.333 Sum_probs=284.2
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC-CcEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP-DRIV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~-~~i~ 123 (483)
.++|+|+.++++++ ++.+.+++.+... .....|++..|.++||+++++++.+.+| +++++ ++|+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~~i~ 94 (384)
T PRK12414 29 HDALNLSQGAPNFAPDPALVEGVARAMR------------DGHNQYAPMAGIAALREALAEKTERLYG--ARYDPASEVT 94 (384)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHH------------hCCCCcCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 36799999998875 4555555543110 1235799999999999999999998877 44555 6899
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.+++++||+|++++|+|..+...++.. |++++.+++++ ++|.+|++.|++++.. ++++|
T Consensus 95 it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~-~~~~~d~~~l~~~l~~------~~~~v 166 (384)
T PRK12414 95 VIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQ-GATPVAIKLSP-EDFRVNWDEVAAAITP------RTRMI 166 (384)
T ss_pred EECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHc-CCEEEEEecCc-cccccCHHHHHhhcCc------ccEEE
Confidence 9999999999999999999999999999999998888876 99999999875 3588999999998753 78999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
+++|||||||.+++.+++++|+++|++||++||+||+|.++.|++ ..+.++..+.. ..+++|+++||||.||+|
T Consensus 167 ~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~-~~~~~~~~~~~-----~~~~~i~~~SfSK~~~~p 240 (384)
T PRK12414 167 IVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDG-ARHHSMARHRE-----LAERSVIVSSFGKSYHVT 240 (384)
T ss_pred EEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCC-CCccCcccCcC-----ccCcEEEEecccccccCc
Confidence 999999999999999999999999999999999999999988875 44344443321 246899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
|+|+||++++ +.+.+.+..... .+.++.++|.++..++.++.+ ..+.++.++++++.+.+.|++.|+.+.++.
T Consensus 241 GlRiG~~v~~-~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~ 315 (384)
T PRK12414 241 GWRVGYCLAP-AELMDEIRKVHQFMVFSADTPMQHAFAEALAEPAS----YLGLGAFYQRKRDLLARELAGSRFELLPSE 315 (384)
T ss_pred cceEEEEecC-HHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChH----HHHHHHHHHHHHHHHHHHHHhCCCeecCCC
Confidence 9999999995 555555555442 345788999999999987554 234667889999999999999999999999
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCC--CCEEEEEeccCCHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPN--PGWFRVCFANMDDRTMEIALSRITS 432 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~--~~~iRis~~~~~~e~l~~~l~~L~~ 432 (483)
||+|+|++++..... .+.+++..+++++||.|.||+.|+..+ .+++||+++. +++++++++++|.+
T Consensus 316 gg~~~~~~~~~~~~~----~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~~~rl~~ 383 (384)
T PRK12414 316 GSFFMLARFRHFSDE----SDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK-DDATLVEGARRLCS 383 (384)
T ss_pred cceEEEEcccccCCC----CHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 999999998752211 123677777878899999999986432 5799999995 89999999999974
No 33
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-51 Score=393.91 Aligned_cols=354 Identities=23% Similarity=0.357 Sum_probs=293.4
Q ss_pred ccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChh
Q 011570 51 MGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGAT 129 (483)
Q Consensus 51 l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~ 129 (483)
|+.+.+..+ |+.+.+++.+.... ...++|.+..|+++|+++|++.+...+|. .-...++|+||+|+.
T Consensus 36 LgqGfp~~~~P~fv~ea~~~~~~~-----------~~~~qYt~~~G~p~L~~aL~k~~se~~~~-~~~~~~eVlVT~GA~ 103 (420)
T KOG0257|consen 36 LGQGFPDFPPPKFVTEAAKNAAKE-----------PSTNQYTRGYGLPQLRKALAKAYSEFYGG-LLDPDDEVLVTAGAN 103 (420)
T ss_pred ccCCCCCCCCcHHHHHHHHHHhcc-----------chhccccccCCchHHHHHHHHHHHHHhcc-ccCCcccEEEecCch
Confidence 888888776 56777766653322 13578999999999999999999987772 223445799999999
Q ss_pred HHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecC------CCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 130 GAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCD------SSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 130 ~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~------~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+++..++++++++||+|++.+|.|..|...++.. |.+.+.+++. ...+|.+|.+.|+.++.+ ++|+|
T Consensus 104 ~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~ma-G~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~------kTk~I 176 (420)
T KOG0257|consen 104 EAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMA-GGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE------KTKAI 176 (420)
T ss_pred HHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhc-CCcceeeccccccccccCccccCChHHHHhhccC------CccEE
Confidence 9999999999999999999999999999999986 9999999987 556899999999999975 89999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++|+||||||.++|+++|++|+++|++||++||+||+|..++|++ ..+.+++++ ++ .++++|.++|+||+||+.
T Consensus 177 i~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~-~~h~r~asl-Pg----m~ertitvgS~gKtf~~T 250 (420)
T KOG0257|consen 177 ILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDG-NKHIRIASL-PG----MYERTITVGSFGKTFGVT 250 (420)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCC-CcceeeecC-Cc----hhheEEEeccccceeeee
Confidence 999999999999999999999999999999999999999999998 777888887 43 579999999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHH-----HHHHHHHHHHHHHHHHHHHHhhhcCCce
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFV-----EKFIAESAKRIAERHKAFTWGLSQVGIG 356 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~-----~~~~~~~~~~l~~~~~~l~~~L~~~gi~ 356 (483)
|||+||+++ ++.+.......... ..++++.|.|.++++..+.-+ ..+.+++.+.|+++|+.|.+.|.++|++
T Consensus 251 GWrlGW~ig-p~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~ 329 (420)
T KOG0257|consen 251 GWRLGWAIG-PKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELGLK 329 (420)
T ss_pred eeeeeeeec-hHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999 67666665554432 457888998888777653311 1345668899999999999999999999
Q ss_pred eecCCceEEEeeecCchhhc---c---ChHHHHHHHHHHHHhcCeEeeCCCCCCCCC-----CCEEEEEeccCCHHHHHH
Q 011570 357 CLKSNAGLFLWMDLHHLLKE---Q---TYEAEMALWRVIINEVKLNVSPGSSFHCPN-----PGWFRVCFANMDDRTMEI 425 (483)
Q Consensus 357 ~~~~~~g~f~~~~l~~~~~~---~---~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~-----~~~iRis~~~~~~e~l~~ 425 (483)
+..|+|++|+|++++...+. . ....+..++..++++.|+.+.|++.|+... .+++|+++. .+++.++.
T Consensus 330 v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~-k~~~~L~~ 408 (420)
T KOG0257|consen 330 VTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFC-KADETLRK 408 (420)
T ss_pred cccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHH-hhHHHHHH
Confidence 99999999999999821110 0 011244688999999999999999998653 246888886 47788888
Q ss_pred HHHHHH
Q 011570 426 ALSRIT 431 (483)
Q Consensus 426 ~l~~L~ 431 (483)
++++|+
T Consensus 409 a~e~l~ 414 (420)
T KOG0257|consen 409 AIERLK 414 (420)
T ss_pred HHHHHh
Confidence 888887
No 34
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=1.4e-50 Score=413.13 Aligned_cols=350 Identities=21% Similarity=0.292 Sum_probs=278.0
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
..++++|+.++++++ ++.+.+.+.+..... ........|++..|.++||+++|+|+.+.+| +++++++|+
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~I~ 103 (409)
T PRK07590 33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEM-------GTAETFRGYGPEQGYDFLREKIAENDYQARG--CDISADEIF 103 (409)
T ss_pred CCceEEecCcCCCCCCCHHHHHHHHHHHhcc-------cccCCccCCCCCCCCHHHHHHHHHHHHHhcC--CcCChhhEE
Confidence 346899999998875 344445444311100 0001346798889999999999999987766 568999999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcE-----------EEEeecCCCCCcccCHHHHHHHHHH
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQ-----------LVPVVCDSSNDFKVTMEALEAAYEK 192 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~-----------~~~v~~~~~~~~~~d~~~l~~~i~~ 192 (483)
+|+|+++++.++. .+++|||+|++++|+|+.|...++.. |.+ +++++++.+++|.+|.+.
T Consensus 104 it~Ga~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~-g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------- 174 (409)
T PRK07590 104 ISDGAKCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVMA-GRTGEANEDGRYSGIVYLPCTAENNFVPELPE------- 174 (409)
T ss_pred ECCCHHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHc-CCcccccccccccceeEeecccccCCcccCcc-------
Confidence 9999999999875 56689999999999999999998886 886 899998766667666432
Q ss_pred HHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEE
Q 011570 193 AQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHI 272 (483)
Q Consensus 193 ~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~ 272 (483)
.++|+|++||||||||.++|.+++++|+++|++||++||+||+|.++.+.+ ..+.++.++.. ..+++|+
T Consensus 175 -----~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~~~~~~~~~~-----~~~~vi~ 243 (409)
T PRK07590 175 -----EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDP-SLPHSIYEIEG-----ARECAIE 243 (409)
T ss_pred -----cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCC-CCCcchhhCCC-----cccceEE
Confidence 278999999999999999999999999999999999999999999877655 33345555422 2357999
Q ss_pred EecCccccCCCCceEEEEEecChHHHH------------HHHHh--hhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHH
Q 011570 273 VYSLSKDMGFPGFRVGIIYSYNDQVVS------------CARKM--SSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKR 338 (483)
Q Consensus 273 ~~S~SK~~g~~GlRiG~li~~~~~l~~------------~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 338 (483)
++||||+||+||+|+||++++++ +.+ ..... ..+..++.++|.+++.++.+.. .+++++.++.
T Consensus 244 ~~SfSK~~~~pGlRiG~~i~~~~-li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~--~~~~~~~~~~ 320 (409)
T PRK07590 244 FRSFSKTAGFTGTRCAYTVVPKE-LKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEG--KAQIKELIDY 320 (409)
T ss_pred EecCccccCCcCceeEEEEcCHH-HhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCc--HHHHHHHHHH
Confidence 99999999999999999999544 443 11111 1234578899999988887543 3567888899
Q ss_pred HHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccC
Q 011570 339 IAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANM 418 (483)
Q Consensus 339 l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~ 418 (483)
++++++.+.+.|.+.|+.+.++.+|+|+|++++...+ +.+++..+++++||.+.||+.|+..+.+++||+++ .
T Consensus 321 ~~~~r~~l~~~L~~~~~~~~~~~g~~f~wi~~~~~~~------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~-~ 393 (409)
T PRK07590 321 YMENAKIIREGLESAGFEVYGGVNAPYIWVKTPDGMS------SWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAF-G 393 (409)
T ss_pred HHHHHHHHHHHHHhcCCceecCCcceEEEEECCCCCC------HHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEcc-C
Confidence 9999999999999999888888899999999986422 23678888888899999999997666789999975 4
Q ss_pred CHHHHHHHHHHHHHH
Q 011570 419 DDRTMEIALSRITSF 433 (483)
Q Consensus 419 ~~e~l~~~l~~L~~~ 433 (483)
+++++++++++|+++
T Consensus 394 ~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 394 SRENVLEAMERIKKA 408 (409)
T ss_pred CHHHHHHHHHHHHhh
Confidence 889999999999875
No 35
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=3.7e-50 Score=407.49 Aligned_cols=349 Identities=23% Similarity=0.384 Sum_probs=288.6
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++++|+.++++++ ++.+.+++.+... .....|++..|.++||+++|+++++.+| +.+++++|++
T Consensus 32 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~i 97 (387)
T PRK08960 32 HDVIHLEIGEPDFTTAEPIVAAGQAALA------------AGHTRYTAARGLPALREAIAGFYAQRYG--VDVDPERILV 97 (387)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHh------------cCCCccCCCCCCHHHHHHHHHHHHHHhC--CCCChhhEEE
Confidence 36789999998864 5555555544211 1224688889999999999999998777 5678999999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++.++++|||+|++++|+|+.+...+... |.+++.++++.+++|.+|++.+++++++ ++++++
T Consensus 98 t~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~~~i~ 170 (387)
T PRK08960 98 TPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLV-EGAAQLVPVGPDSRYQLTPALVERHWNA------DTVGAL 170 (387)
T ss_pred ccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhc-CCeEEEEecCcccCCCCCHHHHHHHhCc------cceEEE
Confidence 999999999999999999999999999999999888876 9999999998777899999999998764 678899
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
+++||||||.+++.+++++|+++|+++|++||+||+|.++.|+. . ..++... .+++++++||||.||++|
T Consensus 171 i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~-~-~~~~~~~--------~~~vi~~~S~SK~~g~~G 240 (387)
T PRK08960 171 VASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGV-D-AASVLEV--------DDDAFVLNSFSKYFGMTG 240 (387)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCC-C-CCChhhc--------cCCEEEEeecccccCCcc
Confidence 99999999999999999999999999999999999999877754 2 2344332 368999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcee-ecCC
Q 011570 285 FRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGC-LKSN 361 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~-~~~~ 361 (483)
+|+||++++ +.+.+.+..... ...++.+.|.++.+++.+. ..+++.+.++.++++++.+.+.|+++|+.+ ..|.
T Consensus 241 lRiG~~~~~-~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~ 317 (387)
T PRK08960 241 WRLGWLVAP-PAAVPELEKLAQNLYISASTPAQHAALACFEPE--TLAILEARRAEFARRRDFLLPALRELGFGIAVEPQ 317 (387)
T ss_pred cEEEEEEcC-HHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcC--cHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCC
Confidence 999999995 555555555443 2446889999988888653 246788888999999999999999988765 4688
Q ss_pred ceEEEeeecCch-hhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC-CCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHHL-LKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP-NPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 362 ~g~f~~~~l~~~-~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~-~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
||+|+|++++.. .+ ..+++..+++++||.|.||+.|+.. .++|+||+++. +.+.+.+++++|+++++
T Consensus 318 g~~f~~~~~~~~~~~------~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~-~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 318 GAFYLYADISAFGGD------AFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ-SLPRLQEAVERIARGLR 386 (387)
T ss_pred eeEEEEEeccccCCC------HHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 999999999852 11 2478888888889999999999753 35699999994 78999999999988775
No 36
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-50 Score=409.05 Aligned_cols=353 Identities=21% Similarity=0.371 Sum_probs=294.3
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|+|+.++++++ ++.+.+.+.+... .....|++..|.++||+++|+++++.+| ..+++++|++
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~~ 98 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALD------------EGWTHYTPNAGIPELREAIAEYYKKFYG--VDVDVDNVIV 98 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCcccEEE
Confidence 46799999998875 4455555443110 1234688888999999999999987776 4578999999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++.+++++||.|++++|+|..+...+... |.+++.++++.+++|.+|++.+++.+.+ ++++|+
T Consensus 99 t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~i~~------~~~~v~ 171 (391)
T PRK08361 99 TAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIA-EAKPIRIPLREENEFQPDPDELLELITK------RTRMIV 171 (391)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHc-CCEEEEEecCCccCCCCCHHHHHHhccc------ccEEEE
Confidence 999999999999999999999999999999999988875 9999999998777889999999998864 688999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
++|||||||.+++.+++++|+++|++++++||+||+|.++.|.+ ....++.++ ..+++++++||||.||++|
T Consensus 172 i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~-------~~~~~i~~~s~SK~~~~~G 243 (391)
T PRK08361 172 INYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEG-AKHYPMIKY-------APDNTILANSFSKTFAMTG 243 (391)
T ss_pred EeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCC-CCCCCHhhc-------CCCCEEEEecCchhcCCcH
Confidence 99999999999999999999999999999999999999887765 444455444 2468999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCC
Q 011570 285 FRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSN 361 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~ 361 (483)
+|+||++++ +.+.+.+..... .+.++++.|.++..++.+..+ .+++++.++.++++++.+.+.|++. |+.+.+|+
T Consensus 244 lRiG~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~ 321 (391)
T PRK08361 244 WRLGFVIAP-EQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKES-WKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPK 321 (391)
T ss_pred hhhhhhccC-HHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcc-cHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCC
Confidence 999999995 455555444433 356788999999999987653 3567888899999999999999987 88899999
Q ss_pred ceEEEeeecCc-hhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHH-LLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 362 ~g~f~~~~l~~-~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
||+|+|++++. ..+ ..+++..+++++||.|.||..|+..+++++||+++ .+++++++++++|++++++
T Consensus 322 g~~~~~~~l~~~~~~------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~-~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 322 GAFYVFANIDETGMS------SEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYA-TSKEKLIEAMERMEKALEE 390 (391)
T ss_pred EEEEEEEECCCCCCC------HHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEec-CCHHHHHHHHHHHHHHHhc
Confidence 99999999974 222 33678888877899999999998666789999998 4788999999999998864
No 37
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.9e-49 Score=402.51 Aligned_cols=356 Identities=22% Similarity=0.414 Sum_probs=290.9
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC-CcEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP-DRIV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~-~~i~ 123 (483)
.++|+|+.+++++. ++.+.+.+.+... .....|++..|.++||++++++++..++ +.+++ ++|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~~i~ 95 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAID------------ANQSHYTGMAGLLELRQAAADFVKEKYN--LDYAPENEIL 95 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 46899999998875 4555555543110 1234698889999999999999998776 44554 7899
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++.+++.+++++||.|++++|+|..+...++.. |.+++.++.++ .+|.+|++.+++++.+. ..++++|
T Consensus 96 it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~~~~~---~~~~~~i 170 (391)
T PRK07309 96 VTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLV-GAEIVEIDTTE-NDFVLTPEMLEKAILEQ---GDKLKAV 170 (391)
T ss_pred EeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHc-CCEEEEEecCC-cCCcCCHHHHHHHhhcc---CCCeEEE
Confidence 9999999999999999999999999999999999888876 99999999764 45789999999988642 2258999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++||||||.+++.+++++|+++|++||++||+||+|.++.|++ ..+.++.++. .+++|+++||||.||++
T Consensus 171 ~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~-~~~~~~~~~~-------~~~~i~~~S~SK~~g~~ 242 (391)
T PRK07309 171 ILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTG-EPHVSIAEYL-------PDQTILINGLSKSHAMT 242 (391)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCC-CCCCCHHHhc-------cCCEEEEecChhhccCc
Confidence 999999999999999999999999999999999999999988765 4445665552 37899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
|+|+||++++ +.+.+.+..... ...+++++|.++..++.+..+ +....++.++++++++.+.|++.|+.+.+|+
T Consensus 243 GlRvG~~v~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~ 318 (391)
T PRK07309 243 GWRIGLIFAP-AEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKD---DALPMKKEYIKRRDYIIEKMTDLGFKIIKPD 318 (391)
T ss_pred cceeEEEEeC-HHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChh---HHHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Confidence 9999999995 445555444332 245788999999999987532 1345667888899999999999999999999
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
||+|+|++++..... ++.+++.++++++||.|.||..|+..+++++||+++. +.+++++++++|++++++.
T Consensus 319 gg~~~~~~l~~~~~~----~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 319 GAFYIFAKIPAGYNQ----DSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA-SMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred eeEEEEEECCCCCCC----CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 999999999864321 1346788888788999999999987667899999984 7899999999999988654
No 38
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.9e-50 Score=404.16 Aligned_cols=353 Identities=24% Similarity=0.446 Sum_probs=291.9
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++++|+.|+++++ ++.+.+.+.+... .....|++..|.++||+++|+++.+.+| ..+++++|++
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~la~~~~~~~~--~~~~~~~i~~ 89 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALA------------DGETFYTHNLGIPELREALARYVSRLHG--VATPPERIAV 89 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCcCcceEEE
Confidence 36799999999886 5566666554211 1124599999999999999999998776 5578999999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCC-CCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSS-NDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
|+|+++++..++.+++++||.|++++|+|+.+...++.. |++++.+|++.+ ++|.+|++.+++.+.+ ++++|
T Consensus 90 t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~d~~~l~~~~~~------~~~~i 162 (382)
T PRK06108 90 TSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKIL-GARVVCVPLDFGGGGWTLDLDRLLAAITP------RTRAL 162 (382)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHC-CCEEEEeeCCCCCCCccCCHHHHHHhcCc------cceEE
Confidence 999999999999999999999999999999999888876 999999998753 4688999999988753 68899
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++||||||.+++.+++++|+++|+++|++||+||+|.++.+.......++.++.. ..+++++++||||.||++
T Consensus 163 ~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~S~SK~~g~~ 237 (382)
T PRK06108 163 FINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAE-----PDDRIIFVNSFSKNWAMT 237 (382)
T ss_pred EEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCC-----CcCCEEEEeechhhccCc
Confidence 999999999999999999999999999999999999999987762133345555432 346899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKS 360 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~ 360 (483)
|+|+||++++ +.+.+.+..... ...++.+.|.++..++.+. .+++++.+++++++++.+.+.|++. |+++.+|
T Consensus 238 G~RiG~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p 313 (382)
T PRK06108 238 GWRLGWLVAP-PALGQVLEKLIEYNTSCVAQFVQRAAVAALDEG---EDFVAELVARLRRSRDHLVDALRALPGVEVAKP 313 (382)
T ss_pred ccceeeeeCC-HHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCC
Confidence 9999999994 555555544332 2446888999998888764 2356777888899999999999887 8888889
Q ss_pred CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 361 NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 361 ~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
++|+|+|++++...+ ..+++..|++++||.+.||+.|+...++++||+++. +++++++++++|+++++
T Consensus 314 ~~g~~~~~~l~~~~~------~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 314 DGAMYAFFRIPGVTD------SLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DPARLDEAVERLRRFLA 381 (382)
T ss_pred CeeEEEEEeCCCCCC------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 999999999975322 337888888888999999999976567899999996 99999999999998875
No 39
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-49 Score=405.80 Aligned_cols=359 Identities=21% Similarity=0.379 Sum_probs=294.6
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++++|+.+.++++ ++.+.+.+.+... ....+|+++.|.++||+++++++.+.+| +.+++++|++
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~i~~ 98 (402)
T PRK06107 33 RSIVDLTVGEPDFDTPDHIKQAAVAAIE------------RGETKYTLVNGTPALRKAIIAKLERRNG--LHYADNEITV 98 (402)
T ss_pred CCEEEcCCCCCCCCCCHHHHHHHHHHHH------------cCCCCCCCCCCCHHHHHHHHHHHHHhcC--CCCChhhEEE
Confidence 46789999988775 3445555443111 1235799999999999999999988777 5578999999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++.+++++||+|++++|+|..|...+... |.+++.++++.+++|.+|++.+++++.. ++++|+
T Consensus 99 t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~~------~~~~v~ 171 (402)
T PRK06107 99 GGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLAN-DGTPVIVACPEEQGFKLTPEALEAAITP------RTRWLI 171 (402)
T ss_pred eCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHc-CCEEEEecCCcccCCCCCHHHHHhhcCc------CceEEE
Confidence 999999999999999999999999999999998887765 8888888887666788999999988753 788999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhc-CcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEK-NIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~-~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++|||||||.+++.+++++|+++|+++ +++||+||+|.++.|.+ ..+.++.++..+ ..+++++++||||.||+|
T Consensus 172 l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~-~~~~~~~~~~~~----~~~~vi~~~S~SK~~~~p 246 (402)
T PRK06107 172 LNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDD-EPTPHLLAAAPE----LRDRVLVTNGVSKTYAMT 246 (402)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCC-CCCCCHHHhCcC----ccCCEEEEeccchhhcCc
Confidence 999999999999999999999999998 99999999999988876 555666665431 236899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKS 360 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~ 360 (483)
|+|+||++++ +.+.+.+..... .+.++.++|.++..++.++ ..++++.++.++++++.+.+.|+++ |+++.+|
T Consensus 247 GlRiG~~~~~-~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p 322 (402)
T PRK06107 247 GWRIGYAAGP-ADLIAAINKLQSQSSSCPSSISQAAAAAALNGD---QSFVTESVAVYKQRRDYALALLNAIPGLSCLVP 322 (402)
T ss_pred ccceeeeecC-HHHHHHHHHHHHhcccCCChHHHHHHHHHhcCC---hHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC
Confidence 9999999994 556666655443 2458899999999999753 3467888889999999999999887 8888899
Q ss_pred CceEEEeeecCchhh-----ccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 361 NAGLFLWMDLHHLLK-----EQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 361 ~~g~f~~~~l~~~~~-----~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
+||+|+|++++...+ .....+..+++..+++++||.++||+.|+. ++|+||+|+ .+++++++++++|+++++
T Consensus 323 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~--~~~iRis~~-~~~e~l~~~l~~l~~~l~ 399 (402)
T PRK06107 323 DGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGL--SPYFRLSIA-TSLETLEEACARIERAVA 399 (402)
T ss_pred CcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEEeC-CCHHHHHHHHHHHHHHHH
Confidence 999999999853211 000112347788888889999999999964 579999999 489999999999999886
Q ss_pred Hh
Q 011570 436 KN 437 (483)
Q Consensus 436 ~~ 437 (483)
+.
T Consensus 400 ~~ 401 (402)
T PRK06107 400 AL 401 (402)
T ss_pred hc
Confidence 54
No 40
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=2.1e-49 Score=396.52 Aligned_cols=341 Identities=23% Similarity=0.358 Sum_probs=280.6
Q ss_pred cccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cEEEe
Q 011570 48 VIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIVMS 125 (483)
Q Consensus 48 ~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~it 125 (483)
+++|+.+.+.++ ++.+.+++.+.. .....|+++.|.++||+++++|+.+.+| ++++++ +|++|
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~-------------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~Iiit 66 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAV-------------PEVSQYPSALGTKALREAISGWFERRFG--VKLDPDAQVLPS 66 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHH-------------hccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcEEEc
Confidence 467787777665 555666665421 1345799999999999999999988777 667888 99999
Q ss_pred CChhHHHHHHHHHhcCCC---CeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 126 GGATGAHETVAFCLADPG---DAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 126 ~G~~~al~~~~~~l~~~g---d~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
+|+++++..++.+++++| |.|+++.|+|+.|...++.. |+++++++++.+++|.+|++.+++++.+ ++++
T Consensus 67 ~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~~~ 139 (350)
T TIGR03537 67 AGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERGALFA-GGEPTAVKLKKEDGFLLRLEKVEKSILE------ETKI 139 (350)
T ss_pred CChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHHHHHhc-CCEEEEcccCcccCCccCHHHHHHhhhh------ccEE
Confidence 999999999999999887 69999999999999999886 9999999997666789999999998865 7899
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
+++++||||||.+++.+++++|+++|+++|++||+||+|.++.++. ...++..+ ..+++|+++||||.+|+
T Consensus 140 i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~-------~~~~~i~~~s~SK~~g~ 210 (350)
T TIGR03537 140 VWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGE--PPHSALEV-------GIENVLAFHSLSKRSGM 210 (350)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCC--CCCchhhc-------CcCCEEEEeecccccCC
Confidence 9999999999999999999999999999999999999999875543 33444443 34789999999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhhhcC--CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecC
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSSFG--LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKS 360 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~ 360 (483)
+|+|+||+++ ++.+.+.+......+ ..+++.|.++..++.+..+ +++.++.++++++.+.+.|.+.|+++.+|
T Consensus 211 ~GlRiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~r~~l~~~~~~~~~~l~~~g~~~~~~ 285 (350)
T TIGR03537 211 TGYRSGFVAG-DEKLISFLRKLRANFGVASPDFVQAAAKAAWSDDNH----VLERRKIFKRKRDLFIEFFNKVGLEYLYP 285 (350)
T ss_pred ccccceeeec-CHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcHH----HHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 9999999998 555666555544332 2344678877777765443 56677888999999999999999998999
Q ss_pred CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHH
Q 011570 361 NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITS 432 (483)
Q Consensus 361 ~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~ 432 (483)
.||+|+|++++...+ ..++++.|++ +||.|.||..|+...++++||+++ .+++++++++++|++
T Consensus 286 ~g~~~~~~~~~~~~~------~~~l~~~L~~-~gv~v~~g~~f~~~~~~~~Ri~~~-~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 286 DATFYLWVKVPSGID------AKDYALRLLE-NGIVVAPGENFGSGEEGYVRVALV-PTLEECEEALRLWER 349 (350)
T ss_pred CeEEEEEEECCCCCC------HHHHHHHHHH-CCEEEcCchhhCCCCCCEEEEEec-CCHHHHHHHHHHHhc
Confidence 999999999986322 2377888875 699999999997655789999997 688999999999875
No 41
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-49 Score=373.30 Aligned_cols=356 Identities=21% Similarity=0.331 Sum_probs=309.2
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.+++.|.+++..++ ++.+.+++++.... ...+|+ .+..++.++|+.|..++++ ..+.++.|++
T Consensus 25 ~DvlPmWVADMDf~~pp~i~~Al~~rvdh------------GvfGY~--~~~~~~~~ai~~w~~~r~~--~~i~~e~i~~ 88 (388)
T COG1168 25 EDVLPMWVADMDFPTPPEIIEALRERVDH------------GVFGYP--YGSDELYAAIAHWFKQRHQ--WEIKPEWIVF 88 (388)
T ss_pred CCcceeeeecccCCCCHHHHHHHHHHHhc------------CCCCCC--CCCHHHHHHHHHHHHHhcC--CCCCcceEEE
Confidence 57899999998876 67777777663221 334665 5678899999999999988 5578999999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecC-CCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCD-SSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
++|...++..++++|++|||.|++..|.|+++...++.. |.++++.|+. +++.|.+|.+.||+++.+ .++|+.
T Consensus 89 ~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n-~R~~i~~pL~~~~~~y~iD~~~LE~~~~~-----~~vkl~ 162 (388)
T COG1168 89 VPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLN-GRKVIENPLVEDDGRYEIDFDALEKAFVD-----ERVKLF 162 (388)
T ss_pred cCcchHhHHHHHHHhCcCCCeeEecCCCchHHHHHHhhc-CcEEEeccccccCCcEEecHHHHHHHHhc-----CCccEE
Confidence 999999999999999999999999999999999999986 9999999986 567899999999999986 368999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++||||||||.+++.++|.+|.++|.+||+.||+||+|+++++.+ ..+.++.++.+. -.++++.+.|.||+|+++
T Consensus 163 iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g-~~h~~~a~ls~~----~a~~~it~~saSKtFNla 237 (388)
T COG1168 163 ILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGG-HKHIPFASLSER----FADNSITLTSASKTFNLA 237 (388)
T ss_pred EEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccC-CCccchhhcChh----hhcceEEEeeccccccch
Confidence 999999999999999999999999999999999999999999998 677888777552 247899999999999999
Q ss_pred CceEEEEEecChHHHHHHHH-hh--hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC--Cceee
Q 011570 284 GFRVGIIYSYNDQVVSCARK-MS--SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV--GIGCL 358 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~-~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--gi~~~ 358 (483)
|+.+++++.+++.+.....+ +. ....+|.++..|..++++.++ .|+.+..+.++.+++++.+.|++. ++++.
T Consensus 238 GL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~---~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~ 314 (388)
T COG1168 238 GLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQGE---PWLDELLEYLKDNRDYVADFLNKHLPGVKVT 314 (388)
T ss_pred hhhheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHHhhCCCcEEe
Confidence 99999999988877554332 22 345688899889888888764 578999999999999999999997 89999
Q ss_pred cCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 359 KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 359 ~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
.|+|.|.+|+++....-. +.++.+.++++.+|.+.+|..||..+.|++|++++ ++.+.++++++||+.++++.
T Consensus 315 ~p~gTYL~WLD~r~l~l~-----d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~a-cpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 315 EPQGTYLAWLDCRELGLD-----DSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFA-CPRAILEEALERLKRALKKR 387 (388)
T ss_pred cCCCceeeeeeccccCCC-----hHHHHHHHHHhhcEeccCCCccCcCCCceEEEecC-CCHHHHHHHHHHHHHHHhcc
Confidence 999999999999874322 23778899999999999999999999999999998 59999999999999988764
No 42
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-49 Score=398.76 Aligned_cols=343 Identities=18% Similarity=0.256 Sum_probs=273.1
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++++|+.|+|+++ ++.+.+++.+.. .....|+++.|.++||+++|+|+.+.+| +++++++|++
T Consensus 24 ~~~i~l~~~~p~~~~~~~~~~a~~~~~-------------~~~~~Y~~~~G~~~lr~aia~~l~~~~g--~~~~~~~I~i 88 (374)
T PRK05839 24 YKGLDLTIGEPQFETPKFIQDALKNNA-------------HLLNKYPKSAGEESLREAQRGFFKRRFK--IELKENELIP 88 (374)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHh-------------hccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCcceEEE
Confidence 37899999998875 455555554321 2346799999999999999999998877 5678999999
Q ss_pred eCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 125 SGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 125 t~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
|+|+++++..++.+++ .+||.|+++.|+|+.|...++.. |+++++++++++++|.+|++..+ + .++|+
T Consensus 89 t~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~~d~~~~~--~-------~~~k~ 158 (374)
T PRK05839 89 TFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIAS-RAKVLLMPLTKENDFTPSLNEKE--L-------QEVDL 158 (374)
T ss_pred ecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhc-CCEEEEeecccccCCcCCcchhh--h-------ccccE
Confidence 9999999999988774 57999999999999999998876 99999999987777888865542 2 16899
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.+. ..+.++............+++|+++||||.||+
T Consensus 159 v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~--~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~ 236 (374)
T PRK05839 159 VILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYEN--TPPPSLLEASILVGNESFKNVLVINSISKRSSA 236 (374)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccC--CCCCCHhhhhcccCccccCcEEEEeccccccCC
Confidence 999999999999999999999999999999999999999986433 333454432110000134799999999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecC
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKS 360 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~ 360 (483)
||+|+||++++ +.+.+.+...... +.++.+.|.++..++.+.. ++++.++.++++++++.+.| ++. .|
T Consensus 237 ~GlRiG~ii~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~l---~~~--~p 306 (374)
T PRK05839 237 PGLRSGFIAGD-ASILKKYKAYRTYLGCASPLPLQKAAAVAWLDDE----HAEFFRNIYAKNLKLAREIL---GIT--IP 306 (374)
T ss_pred ccceeEEEecC-HHHHHHHHHHHhhcCCCCChHHHHHHHHHhccch----HHHHHHHHHHHHHHHHHHhc---CCC--CC
Confidence 99999999994 5566655554432 4578888988887776544 45667788888888888766 443 67
Q ss_pred CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC--CCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 361 NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP--NPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 361 ~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~--~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
.||+|+|++++. ..+++.++++++||.|.||+.|+.. .++|+||+++ .+++++.+++++|+++++
T Consensus 307 ~gg~fi~~~~~~---------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~-~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 307 PATFYVWLPVDN---------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALV-YDTPKLEKALEIIKTYLE 373 (374)
T ss_pred CeeEEEEEeCCC---------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEec-CCHHHHHHHHHHHHHHhh
Confidence 899999999973 2378888887789999999988653 3689999998 489999999999998875
No 43
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=4.1e-49 Score=399.49 Aligned_cols=353 Identities=24% Similarity=0.428 Sum_probs=289.2
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~ 123 (483)
.++++|+.+.+.++ ++.+.+++.+... .....|++..|.++||+++|++++..+| +.++++ +|+
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~~I~ 93 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAIT------------ENYTSYTHNAGLLELRKAACNFVKDKYD--LHYSPESEII 93 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 45689999987654 3455555544211 1235798889999999999999987776 557888 999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++.+++.+++++||.|+++.|+|+.+...++.. |++++.++.++ .+|.+|.+.+++.+.+ ++++|
T Consensus 94 ~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~~~~~l~~~~~~------~~~~i 165 (387)
T PRK07683 94 VTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLC-GAKPVFIDTRS-TGFRLTAEALENAITE------KTRCV 165 (387)
T ss_pred EeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHc-CCEEEEeecCc-ccCCCCHHHHHHhcCc------CceEE
Confidence 9999999999999999999999999999999999988876 99999999875 4688899999988753 68999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|.+ . ..++.++.+ ..+++|+++||||.||+|
T Consensus 166 ~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~-~~~~~~~~~-----~~~~vi~~~s~SK~~~~p 238 (387)
T PRK07683 166 VLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQ-P-HTSIAHFPE-----MREKTIVINGLSKSHSMT 238 (387)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCC-C-cCChhhccC-----CcCCeEEEeeccccccCc
Confidence 999999999999999999999999999999999999999987754 3 345555422 346899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
|+|+||++++ +.+.+.+.....+ ..+++++|.++..++.++. .+.++.++.++++++.+.+.|.+.|+.+.+++
T Consensus 239 GlRiG~i~~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 314 (387)
T PRK07683 239 GWRIGFLFAP-SYLAKHILKVHQYNVTCASSISQYAALEALTAGK---DDAKMMRHQYKKRRDYVYNRLISMGLDVEKPT 314 (387)
T ss_pred cceeEEEEcC-HHHHHHHHHHHHhccCCCChHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Confidence 9999999995 5555555443332 3467789999999997643 24677788899999999999998899989999
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
||+|+|+.++... ..+.+++..+++++||.|.||+.|+..+++++||+++. +++++.+++++|.+++++.
T Consensus 315 ~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~-~~~~~~~al~~l~~~l~~~ 384 (387)
T PRK07683 315 GAFYLFPSIGHFT-----MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY-SIETLKEGLDRLEAFLQQK 384 (387)
T ss_pred eeEEEEEecccCC-----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 9999999987521 01336777888888999999999976667899999985 8999999999999988654
No 44
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=3.4e-49 Score=400.59 Aligned_cols=354 Identities=25% Similarity=0.398 Sum_probs=285.1
Q ss_pred Ccccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cEEE
Q 011570 47 GVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIVM 124 (483)
Q Consensus 47 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~i 124 (483)
++++|+.+.++.+ ++.+.+.+.+... .....|+++.|.++||+++++++++.+| +.++++ +|++
T Consensus 27 ~~i~l~~g~p~~~~p~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~~i~~ 92 (387)
T PRK08912 27 GAINLGQGFPDDPGPEDVRRAAADALL------------DGSNQYPPMMGLPELRQAVAAHYARFQG--LDLDPETEVMV 92 (387)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCcccEEE
Confidence 5689998876654 2223332222100 1245799999999999999999998777 567888 9999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++.+++++||+|++++|+|+.+...++.. |++++.+++++ .+|.+|++.+++.+.+ ++++|+
T Consensus 93 t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~~~~~l~~~~~~------~~~~v~ 164 (387)
T PRK08912 93 TSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRA-GGVPRLVRLEP-PHWRLPRAALAAAFSP------RTKAVL 164 (387)
T ss_pred eCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHc-CCEEEEEecCc-ccCcCCHHHHHHHhCc------cceEEE
Confidence 999999999999999999999999999999999988876 99999999864 3578999999998753 789999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
++|||||||.++|.+++++|+++|++++++||+||+|.++.|++ ..+.++.++.. ..+++++++||||.||++|
T Consensus 165 l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~-----~~~~~i~~~S~SK~~g~~G 238 (387)
T PRK08912 165 LNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDG-RRHIPLMTLPG-----MRERTVKIGSAGKIFSLTG 238 (387)
T ss_pred EeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCC-CCCcChhhCCC-----ccCceEEEeechhhccCcC
Confidence 99999999999999999999999999999999999999887765 44455554422 2468999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCc
Q 011570 285 FRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNA 362 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~ 362 (483)
+|+||++++ +.+.+.+...... +.+++..|.+++.++... .+++++.++.++++++.+.+.|+..|+++.+++|
T Consensus 239 lRiG~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~g 314 (387)
T PRK08912 239 WKVGFVCAA-PPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKP---DDYFEGMRADLARSRDRLAAGLRRIGFPVLPSQG 314 (387)
T ss_pred ceeEEEecC-HHHHHHHHHHHhhccccCChHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc
Confidence 999999995 5555555444332 446667788887777532 3346778888999999999999999999999999
Q ss_pred eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC--CCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 363 GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP--NPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 363 g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~--~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
|+|+|++++..... .+..+++..+++++||.|.||..|+.. ..+|+||+++. +++.+++++++|++++++
T Consensus 315 ~~~l~~~l~~~~~~---~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~-~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 315 TYFLTVDLAPLGLA---EDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK-RDATLDEAVERLAAARRR 386 (387)
T ss_pred ceEEEecccccCCC---CCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHHhc
Confidence 99999999752100 123478888888889999999998643 35799999995 789999999999988764
No 45
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.9e-49 Score=398.13 Aligned_cols=352 Identities=21% Similarity=0.344 Sum_probs=287.5
Q ss_pred Ccccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcC-CCcEEE
Q 011570 47 GVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFD-PDRIVM 124 (483)
Q Consensus 47 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~-~~~i~i 124 (483)
++++|+.++++++ ++.+.+++.+.... .....|++..|.+++|+++++++.+.+| +.++ +++|++
T Consensus 28 ~~~~l~~g~~~~~~~~~~~~a~~~~~~~-----------~~~~~Y~~~~G~~~lr~~~~~~l~~~~g--~~~~~~~~i~~ 94 (389)
T PRK05957 28 GTISLGQGVVSYPPPPEAIEALNNFLAN-----------PENHKYQAVQGIPPLLEAITQKLQQDNG--IELNNEQAIVV 94 (389)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCeEEE
Confidence 5689999998764 45566665442110 1235799999999999999999988777 4455 678999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++.+++++||.|++++|+|..+...++.. |++++.++.+ .+|.+|++++++++++ ++|+|+
T Consensus 95 t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~--~~~~~d~~~l~~~i~~------~~klv~ 165 (389)
T PRK05957 95 TAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMA-GCQPILVPTD--DNYQLQPEAIEQAITP------KTRAIV 165 (389)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhc-CCEEEEeecC--CCCCcCHHHHHHhcCc------CceEEE
Confidence 999999999999999999999999999999998877765 9999999975 3678999999998863 789999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
++|||||||.++|.+++++|+++|+++|++||+||+|.++.|++ ....+...+.. ...++|+++||||.||++|
T Consensus 166 ~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~-~~~~~~~~~~~-----~~~~~i~~~S~SK~~g~~G 239 (389)
T PRK05957 166 TISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDG-VKHFSPGSIPG-----SGNHTISLYSLSKAYGFAS 239 (389)
T ss_pred EeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCC-CCccChhhCCC-----ccCcEEEEecchhhccCcc
Confidence 99999999999999999999999999999999999999987765 33344444422 3468999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHHHHHHhhhcC-C-ceeec
Q 011570 285 FRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDD-QFVEKFIAESAKRIAERHKAFTWGLSQV-G-IGCLK 359 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g-i~~~~ 359 (483)
+|+||++++ +.+.+.+...... ..++.++|.++..++.++ ++ +++.++.++++++.+.+.|.+. + +.+.+
T Consensus 240 lRiG~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~ 314 (389)
T PRK05957 240 WRIGYMVIP-IHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSY----CQQHLPEIAQVRQILLKSLGQLQDRCTLHP 314 (389)
T ss_pred ceeEEEecC-HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHH----HHHHHHHHHHHHHHHHHHHHhcCCCccccC
Confidence 999999994 5566666554432 346778999998888763 34 4555566889999999999887 5 37778
Q ss_pred CCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 360 SNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 360 ~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
++||+|+|++++...+ +.++++.+++++||.|.||+.|+...++|+||+++..+++++++++++|.+.+++.
T Consensus 315 ~~gg~~~~~~~~~~~~------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~ 386 (389)
T PRK05957 315 ANGAFYCFLKVNTDLN------DFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTI 386 (389)
T ss_pred CCeeEEEEEeCCCCCC------hHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 9999999999975432 34788888887899999999997666679999998678999999999999988764
No 46
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=4.5e-49 Score=399.80 Aligned_cols=353 Identities=23% Similarity=0.400 Sum_probs=285.8
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++++|+.++++++ ++.+.+++.+... .....|++..|.++||+++|+|++..+| +.+++++|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~~ 95 (388)
T PRK07337 30 RDIIHMGIGEPDFTAPEPVVEAAARALR------------RGVTQYTSALGLAPLREAIAAWYARRFG--LDVAPERIVV 95 (388)
T ss_pred CCEEEeCCcCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCChHhEEE
Confidence 46799999988764 4444555543111 1245699888999999999999988777 5578999999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++.+++++||+|++++|+|+.+...++.. |++++.++++.+++|.+|++++++.+.+ ++++|+
T Consensus 96 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~ 168 (388)
T PRK07337 96 TAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAA-EGRPVLVPSGPAERFQLTAADVEAAWGE------RTRGVL 168 (388)
T ss_pred ecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHc-CCEEEEeecCCccCCcCCHHHHHhhcCc------cceEEE
Confidence 999999999999999999999999999999998888875 9999999998666789999999988753 789999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
++|||||||.+++.+++++|+++|++++++||+||+|.++.|.+ . +.+...+ .+++|+++||||.||++|
T Consensus 169 l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~-~~~~~~~--------~~~vi~~~S~SK~~~~~G 238 (388)
T PRK07337 169 LASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDA-A-PVSALSL--------GDDVITINSFSKYFNMTG 238 (388)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCC-C-CcChhhc--------cCCEEEEEechhhcCCch
Confidence 99999999999999999999999999999999999999876654 3 2343332 267899999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcee-ecCC
Q 011570 285 FRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGC-LKSN 361 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~-~~~~ 361 (483)
+|+||++++ +.+.+.+..... ...+++++|.++..++.+..+ . ++++.++.++++++.+.+.|++.|+.+ ..|+
T Consensus 239 ~RiG~~~~~-~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~-~-~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~ 315 (388)
T PRK07337 239 WRLGWLVVP-EALVGTFEKLAQNLFICASALAQHAALACFEPDTL-A-IYERRRAEFKRRRDFIVPALESLGFKVPVMPD 315 (388)
T ss_pred hheeeeecC-HHHHHHHHHHHHHhccCCChHHHHHHHHHhccCch-H-HHHHHHHHHHHHHHHHHHHHHhcCCccccCCC
Confidence 999999995 555555544432 235788999999888875432 2 356778899999999999999888765 4688
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC-CCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP-NPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~-~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
+|+|+|++++...... ..++.+++..+++++||.|.||+.|+.. .++|+||+++. +++.+.+++++|.+++
T Consensus 316 ~g~f~~~~~~~~~~~~-~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~-~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 316 GAFYVYADCRGVAHPA-AGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT-SMSRLEEAVARLGKLF 387 (388)
T ss_pred eeEEEEEecccccCCC-CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC-CHHHHHHHHHHHHHHh
Confidence 9999999997531101 0123478888888889999999999753 35799999985 7899999999998765
No 47
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=5.4e-49 Score=400.84 Aligned_cols=357 Identities=20% Similarity=0.348 Sum_probs=287.4
Q ss_pred CCcccccchhhh----h-cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 46 NGVIQMGLAENL----L-CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 46 ~~~i~l~~~~n~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
.++++|+.+++. + +++.+.+.+.+.... .....|++..|.++||+++|++++.. + ..++++
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~g~~~lr~aia~~~~~~-~--~~~~~~ 96 (401)
T TIGR01264 31 KPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDS-----------GKYNGYAPTVGALSAREAIASYYHNP-D--GPIEAD 96 (401)
T ss_pred CCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhc-----------cCCCCCCCCCCCHHHHHHHHHHHhhc-C--CCCCHH
Confidence 467899998763 3 345555555431110 12356988899999999999999863 3 347899
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
+|++|+|+++++.+++.+++++||+|++++|+|..|...++.. |+++++++++.+++|.+|++.+++++.+ ++
T Consensus 97 ~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~-g~~v~~~~~~~~~~~~~d~~~l~~~~~~------~~ 169 (401)
T TIGR01264 97 DVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESM-GIEVKLYNLLPDKSWEIDLKQLESLIDE------KT 169 (401)
T ss_pred HEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHc-CCEEEEeecCCccCCCCCHHHHHHHhcc------Cc
Confidence 9999999999999999999999999999999999999888876 9999999987666789999999988753 67
Q ss_pred eEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCcccc
Q 011570 201 KGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDM 280 (483)
Q Consensus 201 ~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~ 280 (483)
++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|.+ ..+.++..+.. ..++|+++||||+|
T Consensus 170 ~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~------~~~vi~~~SfSK~~ 242 (401)
T TIGR01264 170 AALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSG-ATFEPLASLSS------TVPILSCGGLAKRW 242 (401)
T ss_pred eEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCC-cccccHHHcCC------CCcEEEEccCcccC
Confidence 899999999999999999999999999999999999999999987765 45566666532 23689999999999
Q ss_pred CCCCceEEEEEecCh-----HHHHHHHHhhh-cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-
Q 011570 281 GFPGFRVGIIYSYND-----QVVSCARKMSS-FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV- 353 (483)
Q Consensus 281 g~~GlRiG~li~~~~-----~l~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~- 353 (483)
+++|+|+||+++++. .+.+.+..... .+.+++++|.++..++.+. .++++++.++.++++++.+.+.|+++
T Consensus 243 ~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~l~~~~~~~~~~r~~l~~~L~~~~ 320 (401)
T TIGR01264 243 LVPGWRLGWIIIHDRRGILRDIRDGLVKLSQRILGPCTIVQGALPSILLRT--PQEYFDGTLSVLESNAMLCYGALAAVP 320 (401)
T ss_pred CCccceEEEEEecCcchhHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999642 23333333332 3457889999999998752 24668888889999999999999988
Q ss_pred CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 354 GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 354 gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
|+.+..|++|+|+|++++..... ....+.+++..+++++||.|.||+.|+ .++++||+++ .+++++++++++|+++
T Consensus 321 ~~~~~~p~~g~f~~~~~~~~~~~-~~~~~~~~~~~l~~~~gI~v~pg~~f~--~~~~iRis~~-~~~~~l~~~l~rl~~~ 396 (401)
T TIGR01264 321 GLRPVMPSGAMYMMVGIEMEHFP-EFKNDVEFTERLVAEQSVFCLPGSCFE--YPGFFRVVLT-VPVVMMEEACSRIQEF 396 (401)
T ss_pred CCcccCCCeeeEEEEEecccccC-CCCCHHHHHHHHHHhCCEEEeCchhcC--CCCeEEEEEc-CCHHHHHHHHHHHHHH
Confidence 78877899999999998642000 011234788888878899999999886 3689999998 4789999999999998
Q ss_pred HHH
Q 011570 434 MLK 436 (483)
Q Consensus 434 l~~ 436 (483)
+++
T Consensus 397 ~~~ 399 (401)
T TIGR01264 397 CER 399 (401)
T ss_pred Hhc
Confidence 864
No 48
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1.6e-49 Score=402.57 Aligned_cols=350 Identities=21% Similarity=0.332 Sum_probs=287.7
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~ 123 (483)
.++|+|+.++++++ ++.+.+.+.+... .....|++..|.++||+++++++.+.++ +..+++ +|+
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~~a~~l~~~~~--~~~~~~~~i~ 95 (386)
T PRK09082 30 HGAINLSQGFPDFDGPPYLVEALAYAMA------------AGHNQYPPMTGVAALREAIAAKTARLYG--RQYDADSEIT 95 (386)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHH------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 35789999887765 3445555443110 1235798889999999999999998777 445665 899
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.+++++||+|++++|+|+.+...++.. |++++.++++++ +|.+|++.+++.+.+ ++++|
T Consensus 96 ~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~-g~~~~~~~~~~~-~~~~d~~~l~~~~~~------~~~~v 167 (386)
T PRK09082 96 VTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELA-GGRAVRVALQPP-DFRVDWQRFAAAISP------RTRLI 167 (386)
T ss_pred EeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHc-CCEEEEEecCcc-cccCCHHHHHHhcCc------cceEE
Confidence 9999999999999999999999999999999999988886 999999999753 589999999998853 78999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++||||||.+++.+++++|+++|++||++||+||+|.++.|++ ..+.++.++.. ..+++++++||||.||++
T Consensus 168 ~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~-~~~~s~~~~~~-----~~~~~i~~~S~SK~~~~~ 241 (386)
T PRK09082 168 ILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDG-AGHASVLRHPE-----LRERAFVVSSFGKTYHVT 241 (386)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCC-CCCCChhhCcC-----ccCcEEEEeechhhccch
Confidence 999999999999999999999999999999999999999988865 44566665532 357899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
|+|+||++++ +.+.+.+.+... .+.++.+.|.+++.++... ++++++.++.++++++++.+.|++.|+++.+++
T Consensus 242 G~RiG~iv~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~ 317 (386)
T PRK09082 242 GWKVGYCVAP-AALSAEFRKVHQYNTFTVNTPAQLALADYLRAE---PEHYLELPAFYQAKRDRFRAALANSRFKLLPCE 317 (386)
T ss_pred hhhhhhhhCC-HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Confidence 9999999995 566665555432 2458889999999998632 344677788999999999999999899999999
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC--CCCCEEEEEeccCCHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC--PNPGWFRVCFANMDDRTMEIALSRITS 432 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~--~~~~~iRis~~~~~~e~l~~~l~~L~~ 432 (483)
||+|+|+++++..+ .+..+++..|++++||.+.||+.|+. .+.+++||+++. +++.+++++++|++
T Consensus 318 g~~~~~~~~~~~~~----~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~-~~~~l~~~~~rl~~ 385 (386)
T PRK09082 318 GTYFQLVDYSAISD----LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK-QEETLDAAAERLCQ 385 (386)
T ss_pred eeEEEEEeccccCC----CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 99999999985211 12347888888889999999998863 245799999985 88999999999975
No 49
>PRK07324 transaminase; Validated
Probab=100.00 E-value=1.2e-48 Score=393.94 Aligned_cols=344 Identities=22% Similarity=0.311 Sum_probs=284.8
Q ss_pred CCCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcE
Q 011570 44 NPNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRI 122 (483)
Q Consensus 44 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i 122 (483)
...++++|+++|+... ++.+..+..... .....|++..|.++||++||++++. +++++|
T Consensus 24 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~-------------~~~~~Y~~~~G~~~lr~~ia~~~~~-------~~~~~v 83 (373)
T PRK07324 24 AESCIDSLTLEELLALAGKNPEAFYQELG-------------QKKLTYGWIEGSPEFKEAVASLYQN-------VKPENI 83 (373)
T ss_pred ccCCCCCCcHHHHHhccCcchHHHHHHHh-------------cCCccCCCCCCCHHHHHHHHHHhcC-------CChhhE
Confidence 3467899999998754 333322222210 1235799999999999999999862 578999
Q ss_pred EEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 123 VMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
++|+|+++++.+++.+++++||+|+++.|+|..+...++.. |++++.++++.+++|.+|++.+++.+.+ ++|+
T Consensus 84 i~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~~d~~~l~~~~~~------~~kl 156 (373)
T PRK07324 84 LQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYDIPESL-GAEVDYWQLKEENGWLPDLDELRRLVRP------NTKL 156 (373)
T ss_pred EEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHc-CCEEEEEecccccCCCCCHHHHHHhCCC------CCcE
Confidence 99999999999999999999999999999999999888876 9999999998777899999999887753 7899
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
|++++||||||.+++.+++++|+++|++||++||+||+|.++.+.. .+.++.+. .+++|+++||||.||+
T Consensus 157 i~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~--~~~s~~~~--------~~~~I~~~s~SK~~~~ 226 (373)
T PRK07324 157 ICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG--STPSIADL--------YEKGISTNSMSKTYSL 226 (373)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC--CCCChhhc--------cCCEEEEecchhhcCC
Confidence 9999999999999999999999999999999999999999876654 23454443 3678999999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceeec
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLK 359 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~ 359 (483)
+|+|+||+++ ++.+.+.+.+.... ..++.++|.++..++... ++++++.++.++++++.+.+.|.+. ++.+..
T Consensus 227 ~G~RiG~i~~-~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~---~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 302 (373)
T PRK07324 227 PGIRVGWIAA-NEEVIDILRKYRDYTMICAGVFDDMLASLALEHR---DAILERNRKIVRTNLAILDEWVAKEPRVSYVK 302 (373)
T ss_pred ccceeEEEec-CHHHHHHHHHHhCcEEecCChHHHHHHHHHHcCH---HHHHHHHHHHHHHHHHHHHHHHhcCCCceEEC
Confidence 9999999999 56677766665543 346778898888888753 4567888888999999999999887 788888
Q ss_pred CCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 360 SNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 360 ~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
|.+|+|+|+.++... +..+++.++++++||.|.||+.|+. ++++||+++. +++.+++++++|++++++.
T Consensus 303 p~gg~~~~i~~~~~~------~~~~~~~~ll~~~gv~v~pg~~F~~--~~~iRis~~~-~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 303 PKAVSTSFVKLDVDM------PSEDFCLKLLKETGVLLVPGNRFDL--EGHVRIGYCC-DTETLKKGLKKLSEFLREF 371 (373)
T ss_pred CCceEEEEEEeCCCC------CHHHHHHHHHHhcCEEEECccccCC--CCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence 999999999887532 2347889999889999999999963 5799999984 7899999999999998753
No 50
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=3.5e-48 Score=395.09 Aligned_cols=331 Identities=24% Similarity=0.370 Sum_probs=268.3
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCc
Q 011570 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGV 166 (483)
Q Consensus 87 ~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~ 166 (483)
...|+++.|.++||+++|+++..... ..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++.. |+
T Consensus 65 ~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g~ 141 (404)
T PRK09265 65 AQGYSDSKGLFSARKAIMQYYQQKGI--PDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLS-GG 141 (404)
T ss_pred CCCCCCCCCcHHHHHHHHHHHhccCC--CCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHc-CC
Confidence 45799999999999999999975432 2478999999999999999999999999999999999999999988875 99
Q ss_pred EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCcc
Q 011570 167 QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVF 246 (483)
Q Consensus 167 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~ 246 (483)
+++.++++.+++|.+|++.+++++.. ++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|
T Consensus 142 ~~v~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~ 215 (404)
T PRK09265 142 KPVHYLCDEEAGWFPDLDDIRSKITP------RTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILY 215 (404)
T ss_pred EEEEEecccccCCCCCHHHHHHhccc------cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccC
Confidence 99999887666788999999988753 789999999999999999999999999999999999999999999877
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEec-ChH----HHHHHHHhh-hcCCCChHHHHHHHH
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSY-NDQ----VVSCARKMS-SFGLVSSQTQHLIAT 320 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~-~~~----l~~~~~~~~-~~~~~s~~~q~~~~~ 320 (483)
++ ..+.++..+.. ..++|+++||||+||+||+|+||++++ +.. +.+.+.... ....++.++|.++..
T Consensus 216 ~~-~~~~~~~~~~~------~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 288 (404)
T PRK09265 216 DG-AVHISIASLAP------DLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDMLASMRLCANVPAQHAIQT 288 (404)
T ss_pred CC-CCcCCHHHcCC------CceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHHhccccCCCcHHHHHHHH
Confidence 65 44566665532 247899999999999999999999973 332 222222221 124578899999999
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeC
Q 011570 321 MLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSP 399 (483)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~p 399 (483)
++.+.++..++++. .+.+.++++.+.+.|+++ |+++.+|+||+|+|++++..... ...+.+++..++.++||.|.|
T Consensus 289 ~l~~~~~~~~~~~~-~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~~--~~~~~~~~~~~l~~~gv~v~p 365 (404)
T PRK09265 289 ALGGYQSINELILP-GGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPKVYP--IHDDEQFVLDLLLQEKVLLVQ 365 (404)
T ss_pred HhcCchhHHHHHHH-HHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEecccccC--CCCHHHHHHHHHHhCCEEEEC
Confidence 99765443444333 345677789999999887 88889999999999999753210 011234566677788999999
Q ss_pred CCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 400 GSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 400 g~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
|+.|+...++|+||+++ .+++++++++++|++++++.
T Consensus 366 g~~F~~~~~~~~Ri~~~-~~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 366 GTGFNWPEPDHFRIVTL-PRVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred chhhCCCCCCeEEEEeC-CCHHHHHHHHHHHHHHHHHh
Confidence 99997656789999996 68999999999999998754
No 51
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=2.6e-48 Score=394.84 Aligned_cols=357 Identities=20% Similarity=0.320 Sum_probs=285.2
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~ 123 (483)
.++++|+.+.+... ++.+.+.+.+... ......|+++.|.++||+++++|+++.+| +.++++ +|+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~-----------~~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~i~ 95 (395)
T PRK08175 29 EDIIDFSMGNPDGPTPPHIVEKLCEVAQ-----------RPDTHGYSTSRGIPRLRRAISRWYQDRYD--VDIDPESEAI 95 (395)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHh-----------CCCcCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 46788888765543 2222222222100 01346799999999999999999998777 557777 899
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++.+++..+++|||+|++++|+|+.+...++.. |++++.++++++++ +.+.++++++.. ..++++|
T Consensus 96 ~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~---~~~~l~~~l~~~---~~~~~~v 168 (395)
T PRK08175 96 VTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIA-GAQVRSVPLVEGVD---FFNELERAIRES---YPKPKMM 168 (395)
T ss_pred EccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHc-CCeEEEEecccCCC---cHHHHHHHHhhc---cCCceEE
Confidence 9999999999999999999999999999999988888775 99999999976553 467788777531 2368999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++ ....++..+.. ..+++++++||||.||+|
T Consensus 169 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~-~~~~~~~~~~~-----~~~~~i~~~S~SK~~g~p 242 (395)
T PRK08175 169 ILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDG-WKAPSIMQVPG-----AKDVAVEFFTLSKSYNMA 242 (395)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCC-CCCcchhcCCC-----cccCEEEEeeccccccCc
Confidence 999999999999999999999999999999999999999987765 44455544421 236788999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
|+|+||+++ ++.+.+.+.+.... +++++++|.++..++... ++++++.++.++++++++.+.|.+.|+.+.+|.
T Consensus 243 GlRiG~~~~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~ 318 (395)
T PRK08175 243 GWRIGFMVG-NPELVSALARIKSYHDYGTFTPLQVAAIAALEGD---QQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPK 318 (395)
T ss_pred chhheeeeC-CHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Confidence 999999998 55666666554432 446778888888888653 456788889999999999999999999888889
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
+|+|+|++++..... .++.+++..+++++||.|.||+.|+..+++++||+++ .+++.+.+++++|.+++++
T Consensus 319 ~g~~i~i~l~~~~~~---~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~-~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 319 ASMYVWAKIPEPYAA---MGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI-ENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred EEEEEEEECCcccCC---CCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC-CCHHHHHHHHHHHHHHHHh
Confidence 999999999864321 1234788888888899999999997666789999998 5889999999999998863
No 52
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=4.9e-48 Score=391.91 Aligned_cols=351 Identities=21% Similarity=0.301 Sum_probs=284.2
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.+.++|+.+++++. +..+.+.+.+... -.....|++..|.++||+++++++++.+| ..+++++|++
T Consensus 29 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~i~~ 95 (386)
T PRK07550 29 GPLIDLSQAVPGYPPPPELLRALAEAAA-----------DPAAHLYGPVEGLPELREAYAAHYSRLYG--AAISPEQVHI 95 (386)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHh-----------CcCCcCCCCCCCCHHHHHHHHHHHHHHhC--CCCCcceEEE
Confidence 45799999998765 4445555443110 01345798889999999999999998877 5578999999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++.+++++||+|+++.|+|..+...++.. |+++++++++++.++.+|++.+++++++ ++++|+
T Consensus 96 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~~~~l~~~~~~------~~~~v~ 168 (386)
T PRK07550 96 TSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDML-GIRPVYLPCDEGPGLLPDPAAAEALITP------RTRAIA 168 (386)
T ss_pred ecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhc-CCEEEEEecCCCcCCCCCHHHHHHHhcc------cCcEEE
Confidence 999999999999999999999999999999998888876 9999999998666788999999998864 688999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
+++||||||.++|.+++++|+++|+++|++||+||+|.++.+.. ....+...... ..+++++++||||.+|++|
T Consensus 169 ~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~-~~~~~~~~~~~-----~~~~~i~~~S~SK~~g~~G 242 (386)
T PRK07550 169 LVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGG-GAPHDLFADPD-----WDDTLVHLYSFSKSYALTG 242 (386)
T ss_pred EeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCC-CCCcchhhCCC-----ccccEEEEecchhhccCcc
Confidence 99999999999999999999999999999999999999875543 22223332211 2468999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhh-c-CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCC
Q 011570 285 FRVGIIYSYNDQVVSCARKMSS-F-GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSN 361 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~-~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~ 361 (483)
+|+||++++ +.+.+.+..... . ..++.++|.+++.++.+ ++++.++.++.++++++.+.+.|.+. ++.+ .+.
T Consensus 243 ~RiG~i~~~-~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~ 317 (386)
T PRK07550 243 HRVGAVVAS-PARIAEIEKFMDTVAICAPRIGQIAVAWGLPN---LADWRAGNRAEIARRRDAFRAVFARLPGWEL-LAS 317 (386)
T ss_pred cceEeeecC-HHHHHHHHHHHhhcccCCCcHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHHhCCCcee-CCC
Confidence 999999995 445544444332 2 34678899999999875 35667788889999999999999886 6654 466
Q ss_pred ceEEEeeecCc-hhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHH-LLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 362 ~g~f~~~~l~~-~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
+|+|+|++++. ..+ ..+++..|++++||.|.||..|+...++++||+++..+++++++++++|+++
T Consensus 318 g~~~~~~~~~~~~~~------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 318 GAYFAYVRHPFPDRP------SREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred ceEEEEecCCCCCCC------HHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 88999999975 222 3378888888889999999999755567999999877899999999999875
No 53
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-48 Score=383.49 Aligned_cols=330 Identities=25% Similarity=0.405 Sum_probs=279.9
Q ss_pred CcccccchhhhhcH-HHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEe
Q 011570 47 GVIQMGLAENLLCH-ELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMS 125 (483)
Q Consensus 47 ~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it 125 (483)
++++|+.||||+++ +.+.+.+... ...++.||++ ...+|+++++++++. +++++|+++
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~-------------~~~~~rYPd~-~~~~l~~a~a~~~~~-------~~~~~V~~g 81 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAA-------------LDKLNRYPDP-DYRELRAALAEYYGV-------VDPENVLVG 81 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHH-------------HHhhccCCCC-cHHHHHHHHHHHhCC-------CCcceEEEc
Confidence 67999999999985 4455554431 1246789988 579999999999872 578999999
Q ss_pred CChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 011570 126 GGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLI 205 (483)
Q Consensus 126 ~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l 205 (483)
+|+++.|..++++++.+||.|+++.|+|+.|...++.. |++++.++..+ |.+|++.+.+++.+ ++++|++
T Consensus 82 nGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~-g~~~~~v~~~~---~~~d~~~~~~~~~~------~~~lv~i 151 (356)
T COG0079 82 NGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLA-GAEVVKVPLKE---FRLDLDAILAAIRD------KTKLVFL 151 (356)
T ss_pred CChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHhc-CCeEEEecccc---cccCHHHHHHhhhc------CCCEEEE
Confidence 99999999999999999999999999999999999886 99999999875 88999999998874 6899999
Q ss_pred eCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCc
Q 011570 206 TNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGF 285 (483)
Q Consensus 206 ~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~Gl 285 (483)
||||||||..++.++++++++.+.+ +.+||+||+|.+ |.+ .+...+.. .++|+++++||||+||++|+
T Consensus 152 ~nPNNPTG~~~~~~~l~~l~~~~~~-~~~vVvDEAY~e--F~~----~~~~~l~~-----~~~nlivlRTfSKa~gLAGl 219 (356)
T COG0079 152 CNPNNPTGTLLPREELRALLEALPE-GGLVVIDEAYIE--FSP----ESSLELLK-----YPPNLIVLRTFSKAFGLAGL 219 (356)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEeCchhh--cCC----chhhhhcc-----CCCCEEEEEecHHhhhcchh
Confidence 9999999999999999999999988 899999999998 554 23333332 35889999999999999999
Q ss_pred eEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCce-eecCCceE
Q 011570 286 RVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIG-CLKSNAGL 364 (483)
Q Consensus 286 RiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~-~~~~~~g~ 364 (483)
|+||+++ ++.+++.+++....|+++.+++.++.+++.+.++ +++..+.+.+.|+++.+.|+.+|+. +.++. ++
T Consensus 220 RlGy~ia-~~~~i~~l~~vr~p~~v~~~a~~aa~aal~~~~~----~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~-aN 293 (356)
T COG0079 220 RVGYAIA-NPELIAALNKVRPPFNVSSPALAAAIAALRDADY----LEESVERIREERERLYAALKALGLFGVFPSQ-AN 293 (356)
T ss_pred ceeeccC-CHHHHHHHHHhcCCCCCCHHHHHHHHHHcccHHH----HHHHHHHHHHHHHHHHHHHHhCCCCeecCCC-Cc
Confidence 9999998 6788888989988888999999999999998654 6778888899999999999999855 66666 56
Q ss_pred EEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 365 FLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 365 f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
|++++++.. . ...+.+.|++ +||.|+.+.. .+..++|+||+++ ++++.+.++++|+++++.
T Consensus 294 Fvlv~~~~~------~-~~~l~~~L~~-~giivR~~~~-~~~~~~~lRitvg--t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 294 FVLVRVPDA------E-AAALAEALLK-KGILVRDCSS-VGLLPGYLRITVG--TPEENDRLLAALREVLKG 354 (356)
T ss_pred EEEEECCCc------c-HHHHHHHHHH-CCEEEEeCCC-CCCCCCeEEEEeC--CHHHHHHHHHHHHHHHhc
Confidence 999999851 1 2256777775 5999999876 4445779999999 888889999999988765
No 54
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=6.4e-49 Score=395.51 Aligned_cols=358 Identities=34% Similarity=0.572 Sum_probs=297.6
Q ss_pred Ccccccchhhhhc--HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cEE
Q 011570 47 GVIQMGLAENLLC--HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIV 123 (483)
Q Consensus 47 ~~i~l~~~~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~ 123 (483)
++|+|+.|++... .+.+++++.+... +.........|+++.|.++||+++|+|+++..+ ++++++ +|+
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~~i~ 72 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIR-------GAATSSSFLGYPPPQGYPELREAIADFLGRRYG--VPVDPEANIL 72 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHH-------HHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHT--HHTTGGEGEE
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHH-------HhhcccccccCCCchhhHHHHHHHHHHhhhccC--cccccceEEE
Confidence 4689999887764 2223333322100 001124567899999999999999999997666 667899 999
Q ss_pred EeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 124 MSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 124 it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
+|+|+++++..++..+ .++||.|++++|+|+.+...++.. |.++++++++.+++|.+|++.|++.+++...++.++++
T Consensus 73 ~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 151 (363)
T PF00155_consen 73 VTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIEAARLL-GAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKA 151 (363)
T ss_dssp EESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHHHHT-TSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEE
T ss_pred EecccccchhhhhhcccccccccceecCCcccccccccccc-Cceeeeccccccccccccccccccccccccccccccce
Confidence 9999999999999999 899999999999999999999986 99999999887788999999999999875554435789
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
|++++||||||.+++.+++++|+++|+++|++||+||+|.++.+.. ..+.+...... ...++++++||||.||+
T Consensus 152 v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~-----~~~~vi~~~S~SK~~g~ 225 (363)
T PF00155_consen 152 VLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGD-PDFGPIRSLLD-----EDDNVIVVGSLSKSFGL 225 (363)
T ss_dssp EEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSS-SHTHHHHGHHT-----TTSTEEEEEESTTTTTS
T ss_pred eeecccccccccccccccccchhhhhcccccceeeeeceeccccCC-CccCccccccc-----ccccceeeeeccccccc
Confidence 9999999999999999999999999999999999999999987775 43333222222 34569999999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCc
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNA 362 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~ 362 (483)
+|+|+||+++ ++.+.+.+......+..+++.|.+++.++.+.....+++++.++.++++++++.+.|.+.|+.+.++.+
T Consensus 226 ~GlRvG~i~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~ 304 (363)
T PF00155_consen 226 PGLRVGYIVA-PPELIERLRRFQRSGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLPPEA 304 (363)
T ss_dssp GGGTEEEEEE-EHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHHSB
T ss_pred cccccccccc-hhhhhhhhhhccccccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhheeeccC
Confidence 9999999999 677777777766665568899999999988876555688999999999999999999999999999999
Q ss_pred eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHH
Q 011570 363 GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRI 430 (483)
Q Consensus 363 g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L 430 (483)
|+|+|+.++.. ++.+++++|++++||.+.||..|+. ++++||+++..+++++++++++|
T Consensus 305 ~~~~~~~~~~~-------~~~~l~~~L~~~~gi~v~pg~~~~~--~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 305 GFFLWVRLDPN-------DAEELAQELLEEYGILVRPGSYFGV--PGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp SSEEEEEESHH-------HHHHHHHHHHHHHTEEEEEGGGGTS--TTEEEEEGGCSCHHHHHHHHHHH
T ss_pred ccEEEEEcccc-------hHHHHHHHHHHhCCEEEEecCCCCC--CCEEEEEeccCCHHHHHHHHhhC
Confidence 99999998853 3458899999888999999999986 78999999557999999999986
No 55
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=5.5e-48 Score=393.04 Aligned_cols=356 Identities=22% Similarity=0.366 Sum_probs=284.6
Q ss_pred CCCcccccchhh---hh-cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 45 PNGVIQMGLAEN---LL-CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 45 ~~~~i~l~~~~n---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
+.++|+|+.+.+ ++ +++.+.+++.+... .....|++..|.++||+++|+|++..+| +.++++
T Consensus 29 ~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~ 94 (398)
T PRK08363 29 GIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIK------------EGHNYYGPSEGLPELREAIVKREKRKNG--VDITPD 94 (398)
T ss_pred CCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHH------------cCCCCCCCCCCcHHHHHHHHHHHHHhcC--CCCChh
Confidence 357899999987 34 34555555543110 1134698889999999999999988766 568899
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
+|++|+|+++++..++.+++++||.|++++|+|+.+...++.. |.+++.++..++.+|.+|++.+++++.+ ++
T Consensus 95 ~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~v~~~~~~~~~~~~d~~~l~~~~~~------~~ 167 (398)
T PRK08363 95 DVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFY-GGVPVEYRTIEEEGWQPDIDDIRKKITE------KT 167 (398)
T ss_pred hEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHc-CCEEEEeccccccCCcCCHHHHHhhCCc------ce
Confidence 9999999999999999999999999999999999999888875 9998888432334688999999988753 68
Q ss_pred eEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCcccc
Q 011570 201 KGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDM 280 (483)
Q Consensus 201 ~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~ 280 (483)
++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|.+ .+.++.++. ...++++++||||.|
T Consensus 168 ~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~--~~~~~~~~~------~~~~vi~~~SfSK~~ 239 (398)
T PRK08363 168 KAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEG--KHVSPGSLT------KDVPVIVMNGLSKVY 239 (398)
T ss_pred EEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCC--cccCHHHcC------cCCcEEEEecchhcc
Confidence 999999999999999999999999999999999999999999887754 334555553 235799999999999
Q ss_pred CCCCceEEEEEe-cChHHHHHHH-Hhh----hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-
Q 011570 281 GFPGFRVGIIYS-YNDQVVSCAR-KMS----SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV- 353 (483)
Q Consensus 281 g~~GlRiG~li~-~~~~l~~~~~-~~~----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~- 353 (483)
++||+|+||+++ .++.+.+.+. ... ..+.++.++|.+++.++.+. .+++++.++.++++++.+.+.|.++
T Consensus 240 ~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~l~~~~~~~~~~~~~l~~~L~~~~ 316 (398)
T PRK08363 240 FATGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGP---MDYLEEYMKKLKERRDYIYKRLNEIP 316 (398)
T ss_pred CCccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999998 3443333322 211 12457889999999888652 3457777888999999999999887
Q ss_pred CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 354 GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 354 gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
|+.+..|.||+|+|++++.... ..+.+++..+++++||.|+||+.|+..+++|+||+++ .+++++++++++|+++
T Consensus 317 ~~~~~~p~g~~~~~~~l~~~~~----~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~-~~~~~l~~~l~~l~~~ 391 (398)
T PRK08363 317 GISTTKPQGAFYIFPRIEEGPW----KDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFL-PPVEILEEAMDRFEEF 391 (398)
T ss_pred CCEecCCCeEEEEEEEeccCCC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-CCHHHHHHHHHHHHHH
Confidence 8888889999999999875210 0123666777778899999999997656789999997 5889999999999998
Q ss_pred HHHh
Q 011570 434 MLKN 437 (483)
Q Consensus 434 l~~~ 437 (483)
+++.
T Consensus 392 ~~~~ 395 (398)
T PRK08363 392 MRER 395 (398)
T ss_pred HHHh
Confidence 8763
No 56
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.6e-48 Score=391.51 Aligned_cols=354 Identities=22% Similarity=0.408 Sum_probs=288.8
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++++|+.++++++ ++.+.+++.+.. .....|++..|.+++|+++++++. .+| +.+++++|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~Y~~~~g~~~lr~~ia~~~~-~~~--~~~~~~~i~~ 93 (397)
T PRK07568 30 IKVYHLNIGQPDIKTPEVFFEAIKNYD-------------EEVLAYSHSQGIPELREAFAKYYK-KWG--IDVEPDEILI 93 (397)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHh-------------cCCcCcCCCCCCHHHHHHHHHHHH-HhC--CCCCcceEEE
Confidence 35789999988764 455555554311 124579999999999999999998 445 5578999999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCccc-CHHHHHHHHHHHHhcCCceeEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKV-TMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~-d~~~l~~~i~~~~~~~~~~~~i 203 (483)
|+|+++++..++.+++++||+|++++|+|+.+...++.. |.++++++++.+.+|.+ +++.+++++.+ ++++|
T Consensus 94 t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~g~~~~~~~~l~~~~~~------~~~~v 166 (397)
T PRK07568 94 TNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSA-GVKIVPVTTKIEEGFHLPSKEEIEKLITP------KTKAI 166 (397)
T ss_pred cCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHc-CCEEEEeecCcccCCCCCCHHHHHHhcCc------cceEE
Confidence 999999999999999999999999999999998877775 99999999875555654 67889888753 78999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|.+ ..+.++.++.. ..+++++++||||.||++
T Consensus 167 ~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~-~~~~s~~~~~~-----~~~~~i~~~S~SK~~~~~ 240 (397)
T PRK07568 167 LISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDG-LKYTSALSLEG-----LEDRVIIIDSVSKRYSAC 240 (397)
T ss_pred EEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCC-CCccChhhcCC-----CcCCEEEEecchhhccCC
Confidence 999999999999999999999999999999999999999987765 44556665532 357899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhh-hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMS-SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~ 361 (483)
|+|+||++++++.+.+.+.... ..+.++.+.|.+++.++... +.++++.++.++++++.+.+.|+++ |+.+..|.
T Consensus 241 G~R~G~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~ 317 (397)
T PRK07568 241 GARIGCLISKNKELIAAAMKLCQARLSPPTLEQIGAAALLDTP---ESYFDEVREEYKKRRDILYEELNKIPGVVCEKPK 317 (397)
T ss_pred CcceEEEecCCHHHHHHHHHHhhccCCCCcHHHHHHHHHhhCC---HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCC
Confidence 9999999996666665544332 23457889999999999753 3457788889999999999999887 78888899
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHh-----cCeEeeCCCCCCCC---CCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINE-----VKLNVSPGSSFHCP---NPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~-----~gV~v~pg~~f~~~---~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
||+|+|++++.. ...+++..++++ +||.+.||..|+.. +++++||+|+ .+++++++++++|+++
T Consensus 318 g~~~~~~~l~~~-------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~-~~~~~~~~~~~~l~~~ 389 (397)
T PRK07568 318 GAFYIIAKLPVD-------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV-LNEEDLKRAMEILKEA 389 (397)
T ss_pred cceEEEEecCCC-------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe-CCHHHHHHHHHHHHHH
Confidence 999999999742 123677777764 69999999988532 3469999998 5789999999999999
Q ss_pred HHHhhh
Q 011570 434 MLKNVE 439 (483)
Q Consensus 434 l~~~~~ 439 (483)
+++...
T Consensus 390 l~~~~~ 395 (397)
T PRK07568 390 LEKYNK 395 (397)
T ss_pred HHHhhc
Confidence 987653
No 57
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=1e-47 Score=391.34 Aligned_cols=359 Identities=22% Similarity=0.385 Sum_probs=288.5
Q ss_pred CCcccccchhhh----h-cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 46 NGVIQMGLAENL----L-CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 46 ~~~i~l~~~~n~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
.++++|+.+++. + +++.+.+.+.+.... .....|++..|.+++|+++|++++...+ +.++++
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~~ 97 (403)
T TIGR01265 31 KPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRS-----------GKFNGYAPSVGALAAREAVAEYLSSDLP--GKLTAD 97 (403)
T ss_pred CCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCCCCHHHHHHHHHHHHhhcC--CCCCHH
Confidence 567999999763 2 344455544431110 1234798889999999999999997655 556889
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
+|++|+|+++++.+++.+++++||+|+++.|+|+.+...+... |.+++.++++.+++|.+|++.+++++.+ ++
T Consensus 98 ~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 170 (403)
T TIGR01265 98 DVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFS-GLEVRLYDLLPEKDWEIDLDGLEALADE------KT 170 (403)
T ss_pred HEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHc-CCEEEEecCCcccCCccCHHHHHHHhCc------Cc
Confidence 9999999999999999999999999999999999998888775 9999999987666789999999988753 68
Q ss_pred eEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCcccc
Q 011570 201 KGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDM 280 (483)
Q Consensus 201 ~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~ 280 (483)
+++++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++ ..+.++.++.. ..++|+++||||.|
T Consensus 171 ~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~------~~~vi~~~S~SK~~ 243 (403)
T TIGR01265 171 VAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGD-APFIPMASFAS------IVPVLSLGGISKRW 243 (403)
T ss_pred cEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC-CCccchhhhcc------CCcEEEEeeccccc
Confidence 899999999999999999999999999999999999999999987776 55566666642 35799999999999
Q ss_pred CCCCceEEEEEecC--hH----HHHHHHHhhh-cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 281 GFPGFRVGIIYSYN--DQ----VVSCARKMSS-FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 281 g~~GlRiG~li~~~--~~----l~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
++||+|+||+++++ .. +.+.+..... ...++.++|.+++.++.+.. +.++++.++.++++++.+.+.|+.+
T Consensus 244 ~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (403)
T TIGR01265 244 VVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQRILGPATIVQGALPDILENTP--QEFFDGKISVLKSNAELCYEELKDI 321 (403)
T ss_pred CCCcceEEEEEEeCchhhhHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999843 22 2333333332 34578899999999987522 4567888889999999999999987
Q ss_pred -CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHH
Q 011570 354 -GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITS 432 (483)
Q Consensus 354 -gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~ 432 (483)
|+.+..|.+|+|+|++++..... ...+..+++..+++++||.|.||+.|+ .++|+||+++ .+++.+++++++|++
T Consensus 322 ~~~~~~~p~~g~f~~~~~~~~~~~-~~~~~~~~~~~l~~~~gv~v~pg~~f~--~~~~iRis~~-~~~~~l~~~l~~l~~ 397 (403)
T TIGR01265 322 PGLVCPKPEGAMYLMVKLELELFP-EIKDDVDFCEKLVREESVICLPGSAFG--LPNWVRITIT-VPESMLEEACSRIKE 397 (403)
T ss_pred CCceecCCCceeEEEEeccccccC-CCCCHHHHHHHHHHhCCEEEeCccccC--CCCeEEEEec-CCHHHHHHHHHHHHH
Confidence 78877899999999999753110 011234788888888899999999996 3689999998 478899999999999
Q ss_pred HHHHh
Q 011570 433 FMLKN 437 (483)
Q Consensus 433 ~l~~~ 437 (483)
++++.
T Consensus 398 ~~~~~ 402 (403)
T TIGR01265 398 FCERH 402 (403)
T ss_pred HHHhc
Confidence 88654
No 58
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.8e-48 Score=398.43 Aligned_cols=358 Identities=20% Similarity=0.255 Sum_probs=273.9
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhh-hCCCCCcC-CCcE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKV-RGNRITFD-PDRI 122 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~-~g~~~~~~-~~~i 122 (483)
.++|+|+.+++.++ ++.+.++.... .. .+|+++.|.++||++|++++.+. .+...... .++|
T Consensus 100 ~~~i~l~~g~p~~~~~~~v~e~~~~~--------------~~-~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I 164 (527)
T PRK09275 100 RDAVSYVRDQLGFDADEFVYELVDGI--------------IG-DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDL 164 (527)
T ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHH--------------hc-CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeE
Confidence 34689999988876 44555544331 01 35999999999999999966543 22111112 3499
Q ss_pred EEeCChhHHHHHHHHH-----hcCCCCeEEEeCCCCcChHHHHhhh-cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 123 VMSGGATGAHETVAFC-----LADPGDAFLVPTPYYPGFDRDLRWR-TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 123 ~it~G~~~al~~~~~~-----l~~~gd~Vlv~~P~y~~~~~~~~~~-~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
++|+|+++++..++.+ +++|||+|++++|+|+.|...+... .|.++++++.+++++|.+|++.+++++.
T Consensus 165 ~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~----- 239 (527)
T PRK09275 165 FAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD----- 239 (527)
T ss_pred EEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC-----
Confidence 9999999999999886 6899999999999999999887764 2456677776666789999999998764
Q ss_pred CCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhh--cCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEe
Q 011570 197 NIRIKGVLITNPSNPLGTFLDRETLKDIVSFINE--KNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVY 274 (483)
Q Consensus 197 ~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~--~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~ 274 (483)
+++|+|+++|||||||.+++.+++++|+++|++ ++++||+||+|.++.+ .+.++.... ++++|+++
T Consensus 240 -~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~----~~~s~~~~~-------~~~~I~v~ 307 (527)
T PRK09275 240 -PSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD----DFRSLFAVL-------PYNTILVY 307 (527)
T ss_pred -CCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc----cccCHHHhC-------CCCEEEEe
Confidence 389999999999999999999999999999954 5999999999998543 234554442 37899999
Q ss_pred cCccccCCCCceEEEEEecChHHHHH----H--------------------------------HHhhh--cCCCChHHHH
Q 011570 275 SLSKDMGFPGFRVGIIYSYNDQVVSC----A--------------------------------RKMSS--FGLVSSQTQH 316 (483)
Q Consensus 275 S~SK~~g~~GlRiG~li~~~~~l~~~----~--------------------------------~~~~~--~~~~s~~~q~ 316 (483)
||||.||++|||+||++++++.+.+. + ++... ...++++.|.
T Consensus 308 SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~ 387 (527)
T PRK09275 308 SFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQV 387 (527)
T ss_pred ehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHH
Confidence 99999999999999999976532211 1 12221 2346777887
Q ss_pred H-----HHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhh---ccCh-------HH
Q 011570 317 L-----IATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLK---EQTY-------EA 381 (483)
Q Consensus 317 ~-----~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~---~~~~-------~~ 381 (483)
+ +.+++... +.+.+++++.+++|++.+.+.|. .++...+|+|+||+|++++.... +..+ .+
T Consensus 388 a~al~~~~all~~~---~~~~~~~~~~~~~Rr~~l~~~Lg-~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~ 463 (527)
T PRK09275 388 QMALFSLFALLDEE---DAYKKAMKDIIRRRYKALYEGLG-LPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYS 463 (527)
T ss_pred HHHHHHHHHHHhCc---hHHHHHHHHHHHHHHHHHHHHcC-CCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCC
Confidence 6 23445432 34678888999999999998883 24444679999999999975321 1101 13
Q ss_pred HHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhhc
Q 011570 382 EMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 382 ~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
..+|+.+|++++||.+.||+.|+. .++++|||++..+++++.++.++|++++.+..++
T Consensus 464 ~~~f~~~Ll~e~gV~v~PG~~Fg~-~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y~~~ 521 (527)
T PRK09275 464 PVDLLFRLAEETGVVLLPGGGFGG-PEWSVRVSLANLNEEDYAKIGKAIRKLLDEYYEE 521 (527)
T ss_pred HHHHHHHHHhcCCEEEeCchhhCC-CCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 568999999999999999999975 4678999998778999999999999999988766
No 59
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=4.1e-48 Score=394.18 Aligned_cols=349 Identities=21% Similarity=0.303 Sum_probs=270.8
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
..++++|+.++++++ ++.+.+.+....... ........|++..|.++||+++|+++.+. .+++++|+
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~-------~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-----~~~~d~I~ 99 (402)
T TIGR03542 32 SADIIRLGIGDTTQPLPASVIEAFHNAVDEL-------ASEETFRGYGPEQGYPFLREAIAENDYRG-----RIDPEEIF 99 (402)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhcc-------cccccccCCCCCCCCHHHHHHHHHHHHhc-----CCCHHHEE
Confidence 357799999998865 444444443311100 00012356988889999999999986421 26899999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCc-----------EEEEeecCCCCCcccCHHHHHHHHHH
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGV-----------QLVPVVCDSSNDFKVTMEALEAAYEK 192 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~-----------~~~~v~~~~~~~~~~d~~~l~~~i~~ 192 (483)
+|+|+++++.+++ .++.+||.|++++|+|..|...++.. |+ ++++++++++++|.+|++..
T Consensus 100 it~Ga~~al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~------ 171 (402)
T TIGR03542 100 ISDGAKCDVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNVMA-GRAGVLDDDGRYSKITYLPCTKENNFIPDLPEE------ 171 (402)
T ss_pred ECCCcHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHc-CCccccccccccceEEEeecchhhCCCCCcccc------
Confidence 9999999999875 56689999999999999999988875 99 99999987666676664321
Q ss_pred HHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEE
Q 011570 193 AQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHI 272 (483)
Q Consensus 193 ~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~ 272 (483)
.++++|+++|||||||.++|.+++++|+++|++++++||+||+|.++.+++ ....++..+.. ..+++|+
T Consensus 172 -----~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~-~~~~~~~~~~~-----~~~~vi~ 240 (402)
T TIGR03542 172 -----PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDP-SLPHSIFEIPG-----AKECAIE 240 (402)
T ss_pred -----CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCC-CCCcchhhCCC-----CcccEEE
Confidence 268999999999999999999999999999999999999999999976654 33344444422 2368999
Q ss_pred EecCccccCCCCceEEEEEecChHH-------HHHHH-Hh-hhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHH
Q 011570 273 VYSLSKDMGFPGFRVGIIYSYNDQV-------VSCAR-KM-SSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERH 343 (483)
Q Consensus 273 ~~S~SK~~g~~GlRiG~li~~~~~l-------~~~~~-~~-~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~ 343 (483)
++||||.||+||+|+||++++++.+ ..... .. ...+.++.++|.++..++.+..+ .+..+.++.+++++
T Consensus 241 ~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~--~~~~~~~~~~~~~~ 318 (402)
T TIGR03542 241 FRSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGL--QPILEAISYYMENA 318 (402)
T ss_pred EecCccccCCCCcceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcch--hHHHHHHHHHHHHH
Confidence 9999999999999999999965433 12221 12 22345788999998888876543 23556678889999
Q ss_pred HHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHH
Q 011570 344 KAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTM 423 (483)
Q Consensus 344 ~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l 423 (483)
+.+.+.|++.|+++.++.+|+|+|++++...+ +.+++..+++++||.|+||+.|+..+++|+||+++. +++++
T Consensus 319 ~~~~~~L~~~~~~~~~~~~~~f~~v~l~~~~~------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l 391 (402)
T TIGR03542 319 RILRKALEAAGFKVYGGEHAPYLWVKTPEGIS------SWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG-KRENI 391 (402)
T ss_pred HHHHHHHHhcCceecCCCceeEEEEECCCCCC------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHH
Confidence 99999999889888888899999999986332 237888889888999999999976567899999864 88999
Q ss_pred HHHHHHHHHH
Q 011570 424 EIALSRITSF 433 (483)
Q Consensus 424 ~~~l~~L~~~ 433 (483)
++++++|+++
T Consensus 392 ~~~l~~l~~~ 401 (402)
T TIGR03542 392 VEACERIKEA 401 (402)
T ss_pred HHHHHHHHhh
Confidence 9999999875
No 60
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=1.3e-47 Score=388.98 Aligned_cols=352 Identities=23% Similarity=0.382 Sum_probs=282.8
Q ss_pred Ccccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cEEE
Q 011570 47 GVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIVM 124 (483)
Q Consensus 47 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~i 124 (483)
++++|+.+.+... ++.+.+.+.+... .....|++..|.++||+++++++.+.+| ++++++ +|++
T Consensus 25 ~~i~l~~g~p~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~~i~~ 90 (387)
T PRK07777 25 GAVNLGQGFPDEDGPPEMLEAAQEAIA------------GGVNQYPPGPGIPELRAAIAAQRRRRYG--LEYDPDTEVLV 90 (387)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcEEE
Confidence 5689998875543 2222232222100 1235799999999999999999988777 456676 7999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCC-CCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSS-NDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
|+|+++++..++.+++++||+|+++.|+|+.+...++.. |.+++.++++++ .+|.+|++.+++++.+ ++++|
T Consensus 91 t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v 163 (387)
T PRK07777 91 TVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMA-GAHRVPVPLVPDGRGFALDLDALRAAVTP------RTRAL 163 (387)
T ss_pred eCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHC-CCEEEEeecCCccCCCcCCHHHHHHhcCc------ccEEE
Confidence 999999999999999999999999999999999888876 999999998765 4788999999998753 68999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
+++|||||||.+++.+++++|+++|++++++||+||+|.++.|.+ ..+.++..+.. ..+++++++||||.||++
T Consensus 164 ~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~-~~~~~~~~~~~-----~~~~~i~~~S~SK~~g~~ 237 (387)
T PRK07777 164 IVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDG-ARHLPLATLPG-----MRERTVTISSAAKTFNVT 237 (387)
T ss_pred EEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCC-CCcccHhhCCC-----CcCcEEEEeechhhccCc
Confidence 999999999999999999999999999999999999999887765 44455554422 246899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
|+|+||++++ +.+.+.+..... .+.++++.|.+++.++... ++++++.++.++++++.+.+.|.+.|+++.+++
T Consensus 238 GlRiG~~~~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 313 (387)
T PRK07777 238 GWKIGWACGP-APLIAAVRAAKQYLTYVGGAPFQPAVAHALDHE---DAWVAALRDSLQAKRDRLAAGLAEAGFEVHDSA 313 (387)
T ss_pred CceeEEEecC-HHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHHhCCCCccCCC
Confidence 9999999984 555555544433 2346778888888888653 345777888999999999999999999999999
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC---CCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP---NPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~---~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
||+|+|++++.... ....++++.|++++||.|.||+.|+.. .++++||+++. +++++++++++|+++.
T Consensus 314 g~~~~~~~~~~~~~----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~-~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 314 GTYFLCADPRPLGY----DDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK-RDDTLDEAIRRLRALR 384 (387)
T ss_pred cceEEEecccccCC----CCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence 99999999863111 123478999988889999999988642 24689999984 8999999999998765
No 61
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-47 Score=357.27 Aligned_cols=362 Identities=20% Similarity=0.352 Sum_probs=302.7
Q ss_pred CCcccccchhhhhc-----HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 46 NGVIQMGLAENLLC-----HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
..+|.++.+++..- .+...+++.+.. ..+..+.|++..|....|+++|+|+.+... -.++++
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al-----------~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~--~kl~a~ 127 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDAL-----------RSGKGNGYAPSVGILPARRAVAEYLNRDLP--NKLTAD 127 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHH-----------hcCCCCCcCCccccHHHHHHHHHHhhcCCC--CccCcC
Confidence 36788888876541 122333332210 014568899999999999999999876543 457999
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
+|++|+|+++||.+++.+|.+||..||+|.|+|+.|...+... |.++..+.+-++.+|.+|++.+|+.+.+ +|
T Consensus 128 DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~-~lEVR~ydlLPe~~weIDL~~veal~DE------NT 200 (447)
T KOG0259|consen 128 DVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYS-GLEVRYYDLLPEKDWEIDLDGVEALADE------NT 200 (447)
T ss_pred ceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhc-CceeEeecccCcccceechHHHHHhhcc------Ce
Confidence 9999999999999999999999999999999999998888775 9999999998888999999999999876 89
Q ss_pred eEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCcccc
Q 011570 201 KGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDM 280 (483)
Q Consensus 201 ~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~ 280 (483)
.++++.|||||+|.+++.+.|++|++.|++++++||.||+|.+++|++ .+|.++.++.. .-.||.++|.||.|
T Consensus 201 ~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~-~pfvpmg~fss------iVPVitlggisKrW 273 (447)
T KOG0259|consen 201 VAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGD-KPFVPMGKFSS------IVPVITLGGISKRW 273 (447)
T ss_pred eEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCC-CCccchhhccc------cCceEeeccccccc
Confidence 999999999999999999999999999999999999999999999998 99999888854 35789999999999
Q ss_pred CCCCceEEEEEecCh-------HHHHHHHHhhh-cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 011570 281 GFPGFRVGIIYSYND-------QVVSCARKMSS-FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ 352 (483)
Q Consensus 281 g~~GlRiG~li~~~~-------~l~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~ 352 (483)
=.||||+||++..+. .+.+.+..+.. ....+++.|.|+-.+|.... +++.......++.+.+...+.|.+
T Consensus 274 ~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp--~efF~k~~~~lk~na~l~y~~Lk~ 351 (447)
T KOG0259|consen 274 IVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTP--EEFFDKKLSFLKSNADLCYSRLKD 351 (447)
T ss_pred ccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhCh--HHHHHHHHHHHHhhHHHHHHHHhc
Confidence 999999999998432 12222333322 24477899999999998654 567888889999999999999999
Q ss_pred C-Cce-eecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHH
Q 011570 353 V-GIG-CLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRI 430 (483)
Q Consensus 353 ~-gi~-~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L 430 (483)
+ ++. ...|+|.+|+|+.+.-.. -..++++.+|+..|.+|..+.+.||..|+ .++|+|++++ .+.+.++++..||
T Consensus 352 IP~l~cp~kPeg~mylmv~l~~s~-~~~~~dD~dFc~kL~~Eesv~~LPG~af~--~~nw~Ri~i~-~~~~~leea~~Ri 427 (447)
T KOG0259|consen 352 IPCLTCPVKPEGCMYLMVKLNLSL-FPDIEDDVDFCQKLAREESVICLPGQAFG--LKNWLRIVIT-VEEEMLEEAFSRI 427 (447)
T ss_pred CCCcccCcCCCcceEEEeccchhh-hccccccHHHHHHHhhhcceEEecccccc--CCCeEEEEEc-cChHHHHHHHHHH
Confidence 8 787 568999999999987431 12345677999999999999999999997 4789999998 6889999999999
Q ss_pred HHHHHHhhhc
Q 011570 431 TSFMLKNVEA 440 (483)
Q Consensus 431 ~~~l~~~~~~ 440 (483)
+.+..+.-++
T Consensus 428 k~Fc~RH~~~ 437 (447)
T KOG0259|consen 428 KEFCDRHSKE 437 (447)
T ss_pred HHHHHhhhhc
Confidence 9999887633
No 62
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1e-47 Score=384.50 Aligned_cols=332 Identities=19% Similarity=0.343 Sum_probs=271.5
Q ss_pred Ccccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEe
Q 011570 47 GVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMS 125 (483)
Q Consensus 47 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it 125 (483)
++++|+.++|+.+ ++.+.+.+.+.. .....|+++ +.++||+++|+|++ +++++|++|
T Consensus 20 ~~~~l~~~~~~~~~p~~~~~a~~~~~-------------~~~~~Y~~~-~~~~lr~~ia~~~~--------~~~~~i~it 77 (354)
T PRK06358 20 MILDFSANINPLGVPESLKQAITENL-------------DKLVEYPDP-DYLELRKRIASFEQ--------LDLENVILG 77 (354)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHH-------------HhhhcCCCc-cHHHHHHHHHHHhC--------CChhhEEEC
Confidence 4689999998875 445555554311 234578765 68999999999985 689999999
Q ss_pred CChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 011570 126 GGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLI 205 (483)
Q Consensus 126 ~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l 205 (483)
+|+++++..++.++ .+ +.|++++|+|+.|...++.. |.+++.++++++++|.+| +.+.+.+.. ++++|++
T Consensus 78 ~Ga~~~l~~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d-~~~~~~~~~------~~~~v~~ 147 (354)
T PRK06358 78 NGATELIFNIVKVT-KP-KKVLILAPTFAEYERALKAF-DAEIEYAELTEETNFAAN-EIVLEEIKE------EIDLVFL 147 (354)
T ss_pred CCHHHHHHHHHHHh-CC-CcEEEecCChHHHHHHHHHc-CCeeEEEeCccccCCCcc-HHHHHhhcc------CCCEEEE
Confidence 99999999999986 44 68999999999999988875 999999999877788899 666555532 6899999
Q ss_pred eCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCc
Q 011570 206 TNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGF 285 (483)
Q Consensus 206 ~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~Gl 285 (483)
+|||||||.+++.+++++|+++|++++++||+||+|.++.+++ .. .+...... ..+++|+++||||.||+||+
T Consensus 148 ~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~-~~-~~~~~~~~-----~~~~vi~~~S~SK~~gl~G~ 220 (354)
T PRK06358 148 CNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEEN-ET-ISMINYLE-----NFKNLIIIRAFTKFFAIPGL 220 (354)
T ss_pred eCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCc-cc-hhHHHhcc-----CCCCEEEEEechhhccCcch
Confidence 9999999999999999999999999999999999999887654 32 34333332 35789999999999999999
Q ss_pred eEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceE
Q 011570 286 RVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGL 364 (483)
Q Consensus 286 RiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~ 364 (483)
|+||++++++.+.+.+......+.++.++|.++..++.+..+ +++.++.++++++.+.+.|.+. |+.+.+++|+
T Consensus 221 RiG~lv~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~- 295 (354)
T PRK06358 221 RLGYGLTSNKNLAEKLLQMREPWSINTFADLAGQTLLDDKEY----IKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVN- 295 (354)
T ss_pred hheeeecCCHHHHHHHHHhCCCCcchHHHHHHHHHHhccHHH----HHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcce-
Confidence 999999866677766666665667899999999999976543 5677778899999999999887 7888888765
Q ss_pred EEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 365 FLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 365 f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
|+|++++.. .++++.+++ +||.|+||+.|+..+++++||+++ +++++++++++|++++
T Consensus 296 f~~~~~~~~---------~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRls~~--~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 296 FIFFKLEKP---------IDLRKELLK-KGILIRSCSNYRGLDENYYRVAVK--SREDNKKLLKALEVIL 353 (354)
T ss_pred EEEEEcCch---------HHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence 899999741 267777775 699999999996445689999998 8899999999998765
No 63
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.8e-47 Score=385.27 Aligned_cols=358 Identities=26% Similarity=0.472 Sum_probs=292.8
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++++|+.+++.++ ++.+.+.+.+... .....|++..|.++||+++|+++++.+| ..+++++|++
T Consensus 31 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~~ 96 (393)
T PRK05764 31 RDVISLGAGEPDFDTPEHIKEAAIEALD------------DGKTKYTPAAGIPELREAIAAKLKRDNG--LDYDPSQVIV 96 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHh------------cCCCCcCCCCChHHHHHHHHHHHHHHhC--CCCCHHHEEE
Confidence 45789999988776 3445554443110 1234698889999999999999988776 4578899999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++.+++++||.|++++|+|..+...++.. |.++++++++++++|.+|++.+++++.+ ++++|+
T Consensus 97 ~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~ 169 (393)
T PRK05764 97 TTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLA-GGVPVFVPTGEENGFKLTVEQLEAAITP------KTKALI 169 (393)
T ss_pred eCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHc-CCEEEEEecCcccCCcCCHHHHHHhhCc------cceEEE
Confidence 999999999999999999999999999999998888875 9999999998667889999999998853 688999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
++|||||||.++|.+++++|+++|++||+++|+||+|.++.|.+ ..+.++.++..+ ..+++++++||||.+|++|
T Consensus 170 ~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~----~~~~~i~~~s~SK~~~~~G 244 (393)
T PRK05764 170 LNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDG-AEFTSIASLSPE----LRDRTITVNGFSKAYAMTG 244 (393)
T ss_pred EECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCC-CCcccHHHcCCC----CcCCEEEEecCcccccCcc
Confidence 99999999999999999999999999999999999999887765 444565555221 3468999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCC
Q 011570 285 FRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSN 361 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~ 361 (483)
+|+||+++ ++.+.+.+..... .+.+++++|.++..++... .+++++.++.++++++.+.+.|+++ |+.+..|+
T Consensus 245 ~RiG~i~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 320 (393)
T PRK05764 245 WRLGYAAG-PKELIKAMSKLQSHSTSNPTSIAQYAAVAALNGP---QDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPE 320 (393)
T ss_pred ceeEEEec-CHHHHHHHHHHHhhcccCCChHHHHHHHHHHcCC---hHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCC
Confidence 99999998 4556665554432 3457889999998888731 3557778888899999999999998 99989999
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
||+|+|++++........ ...++...+++++||.+.||..|+. ++++||+++. +++++++++++|.+++++.
T Consensus 321 g~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~gi~v~~g~~f~~--~~~vRis~~~-~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 321 GAFYVFPNVSKLLGKSIT-DSLEFAEALLEEAGVAVVPGIAFGA--PGYVRLSYAT-SLEDLEEGLERIERFLESL 392 (393)
T ss_pred cceEEEEecccccccccC-CHHHHHHHHHHhCCEEEccccccCC--CCEEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 999999999864321110 1347788888888999999998864 6899999984 8999999999999988753
No 64
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=4.8e-47 Score=410.63 Aligned_cols=368 Identities=16% Similarity=0.255 Sum_probs=284.3
Q ss_pred CCCCCCCCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCc
Q 011570 39 YHPTKNPNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITF 117 (483)
Q Consensus 39 ~~~~~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~ 117 (483)
+.+...+.++|+|+.|+|+++ ++.+.+++.+... . ..| +.|+++++++|++|+.+++| ++.
T Consensus 690 ~~~~~~g~~vI~LsinE~d~ppPp~V~eAi~eal~-------------~-~~~--s~g~pdlr~aLa~~la~~~G--v~~ 751 (1082)
T PLN02672 690 SVSGSQESSLIHMDVDESFLPVPSAVKASIFESFV-------------R-QNI--SESETDPRPSILQFIKSNYG--FPT 751 (1082)
T ss_pred CCcccCCCCEEEEeCCCCCCCCCHHHHHHHHHHHh-------------h-cCC--CCCChHHHHHHHHHHHHHhC--cCC
Confidence 344555568899999999987 4566666543110 0 112 34578899999999998887 445
Q ss_pred CC-CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 118 DP-DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 118 ~~-~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
++ ++|++|+|+++++..++.++++|||.|+++.|+|+.|...++.. |++++.+|++++++|.+|++.|++++.+
T Consensus 752 d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~-Ga~vv~Vpl~~e~gf~lD~d~Le~al~~---- 826 (1082)
T PLN02672 752 DSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFL-KANFRRIPTKSSDGFKLTAKTLASTLET---- 826 (1082)
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHc-CCEEEEEecccccCCCCCHHHHHHHhcc----
Confidence 54 58999999999999999999999999999999999999999986 9999999998767899999999998853
Q ss_pred CCceeEEEEeCCC-CCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc--chHHHhhhhcccc-CCCeEEE
Q 011570 197 NIRIKGVLITNPS-NPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF--VSIAEIIDQDIAC-NRNLIHI 272 (483)
Q Consensus 197 ~~~~~~i~l~~P~-NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~--~s~~~l~~~~~~~-~~~~vi~ 272 (483)
.+.++|+++||| ||||.+++.+++++|+++|++||++||+||+|.++.|++ ... .++.+........ ...+|++
T Consensus 827 -~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~-~~~s~~sl~s~l~~~~~~sks~nVIv 904 (1082)
T PLN02672 827 -VKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDT-SGWGGWDLKSILSRLKSSNPSFAVAL 904 (1082)
T ss_pred -CCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCC-CCCcccchhhHHHHhccccCCceEEE
Confidence 134579999997 999999999999999999999999999999999888875 321 1222211110000 0137999
Q ss_pred EecCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHh---cC--ChhHHHHHHHHHHHHHHHHHHHHH
Q 011570 273 VYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATM---LS--DDQFVEKFIAESAKRIAERHKAFT 347 (483)
Q Consensus 273 ~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~---l~--~~~~~~~~~~~~~~~l~~~~~~l~ 347 (483)
++||||.|+++|+|+||++++++.+.+.+..........+..|.++..+ +. ++.| .+++.+.++.++++++++.
T Consensus 905 L~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~-~~~l~e~r~~Lk~rRd~L~ 983 (1082)
T PLN02672 905 LGGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDL-LDGVAEQKKILKSRAERLK 983 (1082)
T ss_pred EeCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHH-HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999976667776655433332333444444333 32 3344 5678888899999999999
Q ss_pred HhhhcCCceeecCCceEEEeeecCchhh------cc----C-hHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEec
Q 011570 348 WGLSQVGIGCLKSNAGLFLWMDLHHLLK------EQ----T-YEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFA 416 (483)
Q Consensus 348 ~~L~~~gi~~~~~~~g~f~~~~l~~~~~------~~----~-~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~ 416 (483)
+.|++.|+.+.+|+||||+|++++.... .. . -.++.++++.|++++||.|.||+.|+. ++|+||+++
T Consensus 984 e~L~~~Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~--~g~~RIsfa 1061 (1082)
T PLN02672 984 ETLEACGWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGI--PGYCRFSFA 1061 (1082)
T ss_pred HHHHHCCCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCC--CCeEEEEec
Confidence 9999999999999999999998753211 00 0 012458999999888999999988763 689999998
Q ss_pred cCCHHHHHHHHHHHHHHHH
Q 011570 417 NMDDRTMEIALSRITSFML 435 (483)
Q Consensus 417 ~~~~e~l~~~l~~L~~~l~ 435 (483)
.+++++++++++|+++.+
T Consensus 1062 -~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1062 -LEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred -CCHHHHHHHHHHHHHHHH
Confidence 588899999999998654
No 65
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=7.9e-48 Score=386.26 Aligned_cols=328 Identities=19% Similarity=0.298 Sum_probs=265.8
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|+|+.|+|+++ ++.+.+++.+.. .....|+ ..|.++||++||++++ +++++|++
T Consensus 29 ~~~i~l~~nen~~~~~~~v~~a~~~~~-------------~~~~~Yp-~~g~~~Lr~aia~~~~--------~~~~~I~v 86 (366)
T PRK01533 29 HSFVKLASNENPFGCSPRVLDELQKSW-------------LDHALYP-DGGATTLRQTIANKLH--------VKMEQVLC 86 (366)
T ss_pred CceEEeCCCCCCCCCCHHHHHHHHHHH-------------HhcCcCC-CCCHHHHHHHHHHHhC--------CCcceEEE
Confidence 46799999999986 455666554311 1234575 4688999999999985 68999999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++.+++.+++++||.|++++|+|+.|...+... |++++.+++++ +.+|++.+++++.+ ++++|+
T Consensus 87 t~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~-g~~v~~v~~~~---~~~d~~~l~~~~~~------~~~~v~ 156 (366)
T PRK01533 87 GSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIE-GCEVKEVALNN---GVYDLDEISSVVDN------DTKIVW 156 (366)
T ss_pred CCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHc-CCEEEEeecCC---CCcCHHHHHHHhCc------CCcEEE
Confidence 999999999999999999999999999999999998876 99999999853 46899999988753 689999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
+||||||||.+++.+++++|+++|++++ ++|+||+|.++.+.+ . ..+...... ..+++|+++||||.||++|
T Consensus 157 i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~-~-~~~~~~~~~-----~~~~vi~~~SfSK~~~l~G 228 (366)
T PRK01533 157 ICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAK-D-FPETLPLLE-----KHKNILVLRTFSKAYGLAS 228 (366)
T ss_pred EeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccc-c-CcchhHHhc-----cCCCEEEEeCchHHhcChH
Confidence 9999999999999999999999998876 577899998765443 2 223333322 3578999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceE
Q 011570 285 FRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGL 364 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~ 364 (483)
+|+||+++ ++.+.+.+.+....+.++.++|.++..+|.+.++ .++.++.++++++++.+.++.+|+++.+++| +
T Consensus 229 lRiG~~i~-~~~~~~~l~~~~~~~~~~~~~q~aa~~~l~~~~~----~~~~~~~~~~~r~~~~~~l~~~g~~~~~~~~-n 302 (366)
T PRK01533 229 FRVGYAVG-HEELIEKLNVVRLPFNVSSLAQKAATIAFGDDEF----IEEIVRVNTEGLRQYESFCKENEIPFYQSQT-N 302 (366)
T ss_pred HHHhHHhC-CHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHHHHHhCCCccCCCcC-c
Confidence 99999999 4666666666655577999999999999987655 4555666777788888888888998888865 5
Q ss_pred EEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhh
Q 011570 365 FLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 365 f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
|+|++++. ..++.+.|+ ++||.|++ | ++++||+++ +.++++.++++|+++++..+
T Consensus 303 f~~~~~~~---------~~~~~~~l~-~~GI~Vr~---~----~~~iRis~~--~~~~~~~l~~al~~~~~~~~ 357 (366)
T PRK01533 303 FIFLPVEN---------GGEIYEACA-HAGFIIRP---F----PNGVRITVG--TREQNEGVISVLQQHFENKK 357 (366)
T ss_pred EEEEeCCC---------HHHHHHHHH-HCCcEEcc---C----CCceEEeCC--CHHHHHHHHHHHHHHHHhcc
Confidence 99999863 125666666 57999997 3 368999998 88999999999998876554
No 66
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=3.9e-47 Score=386.41 Aligned_cols=344 Identities=18% Similarity=0.223 Sum_probs=268.8
Q ss_pred Ccccccchhh---h--hc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 47 GVIQMGLAEN---L--LC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 47 ~~i~l~~~~n---~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
++|+|+.+.+ . .+ .+.+.+++.+.... .....|+++.|.++||+++++|+....+ ..++++
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~-----------~~~~~Y~~~~G~~~lR~aia~~~~~~~~--~~~~~~ 93 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLET-----------ETTKNYLPIEGLAAYRQAVQELLFGADS--PALAAG 93 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhccc-----------ccCCCcCCCCCCHHHHHHHHHHhcCCCC--cccccC
Confidence 6799999852 1 12 24555555442111 1345799999999999999999975433 235788
Q ss_pred cE--EEeCChhHHHHHHHHHh--cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 121 RI--VMSGGATGAHETVAFCL--ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 121 ~i--~it~G~~~al~~~~~~l--~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
+| ++|+|+++++.++++++ ++|||+|++++|+|+.|...++.. |++++++|+.++++|.+|++.+++++.+.
T Consensus 94 ~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~-g~~~v~v~~~~~~~~~~d~~~l~~~~~~~--- 169 (396)
T PRK09257 94 RVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAA-GLEVKTYPYYDAATKGLDFDAMLADLSQA--- 169 (396)
T ss_pred eEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHc-CCcEEEEeccccccCccCHHHHHHHHHhC---
Confidence 87 99999999999998766 589999999999999999999986 99999999843445889999999988642
Q ss_pred CCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecC
Q 011570 197 NIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSL 276 (483)
Q Consensus 197 ~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~ 276 (483)
..+.++++++|||||||.++|.+++++|+++|++||++||+||+|.++.++.+..+.++..+.. ..+++|+++||
T Consensus 170 ~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~-----~~~~vi~i~Sf 244 (396)
T PRK09257 170 PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAA-----AGLELLVASSF 244 (396)
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHh-----cCCcEEEEEEc
Confidence 1234566779999999999999999999999999999999999999976542122345544433 34689999999
Q ss_pred ccccCCCCceEEEEEe--cChH-HH---HHHHHh--hhcCCCChHHHHHHHHhcCChhH---HHHHHHHHHHHHHHHHHH
Q 011570 277 SKDMGFPGFRVGIIYS--YNDQ-VV---SCARKM--SSFGLVSSQTQHLIATMLSDDQF---VEKFIAESAKRIAERHKA 345 (483)
Q Consensus 277 SK~~g~~GlRiG~li~--~~~~-l~---~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~---~~~~~~~~~~~l~~~~~~ 345 (483)
||.|+++|+|+||+++ ++.. +. ..+... ..++.++.+.|.+++.++.++.+ ..+++++.++.++++++.
T Consensus 245 SK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~ 324 (396)
T PRK09257 245 SKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQL 324 (396)
T ss_pred CCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999989999999984 3332 22 222222 23344688899999999988643 367788899999999999
Q ss_pred HHHhhhcCC----ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHH
Q 011570 346 FTWGLSQVG----IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDR 421 (483)
Q Consensus 346 l~~~L~~~g----i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e 421 (483)
+.+.|++.+ +.+..|+||+|+|++++. +++.++++++||.+.|. + ||+|+..+++
T Consensus 325 l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~~-----------~~~~~l~~~~~V~~~p~--------~--ri~~~~~~~~ 383 (396)
T PRK09257 325 LVEALKAKGPSRDFDFIARQRGMFSYSGLTP-----------EQVDRLREEFGVYAVGS--------G--RINVAGLNES 383 (396)
T ss_pred HHHHHHhcCCCCCcccccccceEEEecCCCH-----------HHHHHHHHcCCEEEcCC--------C--eEEEeeCCHH
Confidence 999999874 667889999999998862 45677888999998862 2 9999878999
Q ss_pred HHHHHHHHHHHH
Q 011570 422 TMEIALSRITSF 433 (483)
Q Consensus 422 ~l~~~l~~L~~~ 433 (483)
++++++++|+++
T Consensus 384 ~i~~~~~~i~~~ 395 (396)
T PRK09257 384 NIDYVAEAIAAV 395 (396)
T ss_pred HHHHHHHHHHhh
Confidence 999999999875
No 67
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.8e-47 Score=385.79 Aligned_cols=346 Identities=16% Similarity=0.186 Sum_probs=268.5
Q ss_pred Ccccccchhhh-hc-----HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 47 GVIQMGLAENL-LC-----HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 47 ~~i~l~~~~n~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
++++|+.+.++ .. .+.+.+++..... .....+|+++.|.++||+++|+|+....+ ..++++
T Consensus 30 ~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~-----------~~~~~~Y~~~~G~~~lR~aia~~~~~~~~--~~~~~~ 96 (404)
T PTZ00376 30 SKVNLGIGAYRDENGKPYVLESVRKAEKIIAE-----------KNLDKEYLPIEGLQSFIEAAQKLLFGEAS--YALAEK 96 (404)
T ss_pred ccEecccceeECCCCCEehhhHHHHHHHHhcc-----------ccCCCCCCCCCCCHHHHHHHHHHhcCCCc--cccccC
Confidence 66899998742 22 2234444332110 12346899999999999999999865433 346889
Q ss_pred cEE--EeCChhHHHHHHHH---HhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 121 RIV--MSGGATGAHETVAF---CLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 121 ~i~--it~G~~~al~~~~~---~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
+|+ .|.|+++++..++. ++++|||+|++++|+|+.|...++.. |++++++|+.++++|.+|++.+++++++.
T Consensus 97 ~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~-G~~~~~v~l~~~~~~~~d~~~l~~~~~~~-- 173 (404)
T PTZ00376 97 RIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSA-GLNVKEYRYYDPKTKGLDFDGMLEDLRTA-- 173 (404)
T ss_pred eEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHc-CCceeeccccCcccCCcCHHHHHHHHHhC--
Confidence 998 59999999988875 67899999999999999999999986 99999999955556899999999998642
Q ss_pred cCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC-CCcchHHHhhhhccccCCCeEEEEe
Q 011570 196 SNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE-SSFVSIAEIIDQDIACNRNLIHIVY 274 (483)
Q Consensus 196 ~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~-~~~~s~~~l~~~~~~~~~~~vi~~~ 274 (483)
.+++++++++|||||||.+++.+++++|+++|++|+++||+||+|.++.|.+. ..+.++..+.. ..+++|+++
T Consensus 174 -~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~-----~~~~vi~i~ 247 (404)
T PTZ00376 174 -PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAE-----RGVEFLVAQ 247 (404)
T ss_pred -CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHh-----cCCcEEEEE
Confidence 12456778899999999999999999999999999999999999999877430 12234444432 346899999
Q ss_pred cCccccCCCCceEEEEE--ecChHHHH----HHHHh-hh-cCCCChHHHHHHHHhcCChhHHHH---HHHHHHHHHHHHH
Q 011570 275 SLSKDMGFPGFRVGIIY--SYNDQVVS----CARKM-SS-FGLVSSQTQHLIATMLSDDQFVEK---FIAESAKRIAERH 343 (483)
Q Consensus 275 S~SK~~g~~GlRiG~li--~~~~~l~~----~~~~~-~~-~~~~s~~~q~~~~~~l~~~~~~~~---~~~~~~~~l~~~~ 343 (483)
||||.||++|+|+||++ ..++.+.+ .+.+. .. ++.+++++|.+++.++.++++.+. ++++.++.+++++
T Consensus 248 SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r 327 (404)
T PTZ00376 248 SFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMR 327 (404)
T ss_pred eCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999984 22444332 22222 22 334567899999999988654333 3556678899999
Q ss_pred HHHHHhhhcCC----ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCC
Q 011570 344 KAFTWGLSQVG----IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMD 419 (483)
Q Consensus 344 ~~l~~~L~~~g----i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~ 419 (483)
+.+.+.|++.+ +.+..|+||+|+|++++. +++.+|++++||.+.|| + |++++..+
T Consensus 328 ~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~~-----------~~~~~L~~~~~v~v~p~--------~--Ris~~~~~ 386 (404)
T PTZ00376 328 QLLYDELKALGSPGDWEHIINQIGMFSFTGLTK-----------EQVERLIEKYHIYLLDN--------G--RISVAGLT 386 (404)
T ss_pred HHHHHHHHhcCCCCcccccccCceEEEecCCCH-----------HHHHHHHHhCCEeecCC--------C--eEEEeccC
Confidence 99999999875 456678999999998852 67889999999999987 1 99997679
Q ss_pred HHHHHHHHHHHHHHHH
Q 011570 420 DRTMEIALSRITSFML 435 (483)
Q Consensus 420 ~e~l~~~l~~L~~~l~ 435 (483)
.++++.++++|++++.
T Consensus 387 ~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 387 SKNVDYVAEAIHDVVR 402 (404)
T ss_pred HHhHHHHHHHHHHHHh
Confidence 9999999999998865
No 68
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.7e-47 Score=378.44 Aligned_cols=327 Identities=18% Similarity=0.299 Sum_probs=261.8
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
+.++++|+.|+|++. ++.+.+.+.+.. .....|++ .|.++||+++|++++ +++++|+
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~-------------~~~~~Y~~-~~~~~lr~~ia~~~~--------~~~~~I~ 86 (357)
T PRK14809 29 PDDLVKLSSNENPHGPSPAAVEAIREAA-------------ERVHSYPK-ASHADLTAALADRWD--------VSPEQVW 86 (357)
T ss_pred ccceeEecCCCCCCCCCHHHHHHHHHHH-------------hhhhcCCC-CCHHHHHHHHHHHhC--------CCcceEE
Confidence 457899999999985 444555554311 12357875 678999999999985 6899999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++.+++.++++|||.|++++|+|+.|....... |.+++.++++.+++|.++++.+++... ++++|
T Consensus 87 it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~-g~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~k~i 158 (357)
T PRK14809 87 LANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYH-HGEVREYPVSKADDFEQTADTVLDAYD-------GERIV 158 (357)
T ss_pred ECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHc-CCeEEEEecccCcCCCcCHHHHHHhhc-------CCcEE
Confidence 9999999999999999999999999999999887777765 999999998766678888887766542 57899
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++||||||||.++|.+++++|+++|++ +++||+||+|.++.+.. +...... ..+++++++||||.||++
T Consensus 159 ~l~~p~NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~-----~~~~~~~-----~~~~vi~~~SfSK~~~~~ 227 (357)
T PRK14809 159 YLTSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERP-----SAVALVE-----ERDDVAVLRTFSKAYGLA 227 (357)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCc-----hhHHHHh-----hCCCEEEEecchhHhcCc
Confidence 999999999999999999999999875 78999999999865432 2222222 347899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCce
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAG 363 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g 363 (483)
|+|+||++++ +.+.+.+.+....+.+++++|.++..++.+.+ ++++.++.++++++++.+.|...++ +.+|
T Consensus 228 GlRiG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~----~~~~~~~~~~~~r~~l~~~L~~~~~----~~~g 298 (357)
T PRK14809 228 GLRLGYAVVP-EEWADAYARVNTPFAASELACRAGLAALDDDE----HVERTVETARWAREYIREELDAPTW----ESAG 298 (357)
T ss_pred chhheeeecC-HHHHHHHHHhCCCCCCCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHhcCccC----CCCC
Confidence 9999999994 55666665555556688899999888887644 4666777888899999999875432 4667
Q ss_pred EEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 364 LFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 364 ~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
+|+|++++. ..++++.+ +++||.|+||+.|+. ++++||+++ +++++++++++|+++++
T Consensus 299 ~f~~~~~~~---------~~~~~~~l-~~~gv~v~~g~~f~~--~~~iRls~~--~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 299 NFVLAEVGD---------ASAVAEAA-QERGVIVRDCTSFGL--PECIRITCG--TREETERAVEVLNEVLA 356 (357)
T ss_pred CEEEEECCC---------HHHHHHHH-HHCCEEEEECccCCC--CCeEEEecC--CHHHHHHHHHHHHHHhc
Confidence 899998852 23666665 567999999999863 579999997 67899999999998875
No 69
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.8e-46 Score=371.01 Aligned_cols=315 Identities=15% Similarity=0.247 Sum_probs=251.0
Q ss_pred CcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeC
Q 011570 47 GVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSG 126 (483)
Q Consensus 47 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~ 126 (483)
.+|+|+.|||++.. ......||++. ..+||+++|++++ +++++|++|+
T Consensus 17 ~~i~l~~Nenp~~~-----------------------~~~~~~Yp~~~-~~~lr~~ia~~~~--------~~~~~I~it~ 64 (332)
T PRK06425 17 RIIDFSANINDFMD-----------------------IGDISIYPEIS-YTDIEDQIKIYTQ--------GLKIKVLIGP 64 (332)
T ss_pred CEEEeccccCCCcC-----------------------hhhcccCcCcC-HHHHHHHHHHHhC--------CCcceEEECC
Confidence 56899999999841 01346798764 7999999999987 5799999999
Q ss_pred ChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEe
Q 011570 127 GATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLIT 206 (483)
Q Consensus 127 G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~ 206 (483)
|+++++..++. ++++|+ |++++|+|+.|...++.. |++++.+|+++ +.+|.+.+++ .++++|++|
T Consensus 65 Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~~~~~~~-G~~v~~vp~~~---~~~~~~~l~~---------~~~k~v~l~ 129 (332)
T PRK06425 65 GLTHFIYRLLS-YINVGN-IIIVEPNFNEYKGYAFTH-GIRISALPFNL---INNNPEILNN---------YNFDLIFIV 129 (332)
T ss_pred CHHHHHHHHHH-HhCCCc-EEEeCCChHHHHHHHHHc-CCeEEEEeCCc---ccCcHHHHhh---------cCCCEEEEe
Confidence 99999999997 467775 667799999999999986 99999999864 3456544432 278999999
Q ss_pred CCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCce
Q 011570 207 NPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFR 286 (483)
Q Consensus 207 ~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlR 286 (483)
|||||||.+++.+++++|+++|++++++||+||+|.++.+.. . .+...+.. ..+++|+++||||+||+||+|
T Consensus 130 nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~-~--~~~~~~~~-----~~~~vi~~~SfSK~~~l~GlR 201 (332)
T PRK06425 130 SPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR-A--EEDVLLNR-----SYGNVIIGRSLTKILGIPSLR 201 (332)
T ss_pred CCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccccc-c--hhHHHHhc-----cCCCEEEEeecHHhcCCchhh
Confidence 999999999999999999999999999999999999876543 2 34444443 457999999999999999999
Q ss_pred EEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEE
Q 011570 287 VGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFL 366 (483)
Q Consensus 287 iG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~ 366 (483)
+||+++ ++.+.+.+.+....+.++.+++.++. ... .+.++++.++.++++++++.+.|+++|+.+..+.+|+|+
T Consensus 202 iGy~v~-~~~li~~l~~~~~~~~~~~~~~~~l~----~~~-~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~g~f~ 275 (332)
T PRK06425 202 IGYIAT-DDYNMKISRKITEPWSVCDPAIDFIR----SID-LDYVAKHSLDIMENERSYLINNLEAMGFRAAGDPSANFI 275 (332)
T ss_pred heeeec-CHHHHHHHHHcCCCCccCHHHHHHHH----Hhh-hHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCceEE
Confidence 999999 55666666665555555555443322 222 244567778899999999999999999887654566799
Q ss_pred eeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 367 WMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 367 ~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
|++++. ..++++.+++ +||.|+||+.|+..+++|+||+++ ++++++.++++|++++
T Consensus 276 ~~~~~~---------~~~~~~~l~~-~gi~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 276 TFMIPD---------AHDFYSYLLK-NGILVRLLDDYECLGEQYIRIAIR--RRSFNIKLVNALRNFL 331 (332)
T ss_pred EEEcCC---------HHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence 999862 2367777775 599999999997555689999998 7889999999998765
No 70
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=4.5e-46 Score=373.97 Aligned_cols=333 Identities=19% Similarity=0.271 Sum_probs=255.9
Q ss_pred CCCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcE
Q 011570 44 NPNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRI 122 (483)
Q Consensus 44 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i 122 (483)
.+.++++|+.++|+++ ++.+.+.+.+. ......|+++ +..+||++||+|++ +++++|
T Consensus 20 ~~~~~i~l~~~~n~~~~~~~~~~a~~~~-------------~~~~~~Y~~~-~~~~Lr~aia~~~~--------v~~~~I 77 (360)
T PRK07392 20 PPDAILDFSASINPLGPPESVIAAIQSA-------------LSALRHYPDP-DYRELRLALAQHHQ--------LPPEWI 77 (360)
T ss_pred CcccEEEeCCcCCCCCCCHHHHHHHHHH-------------HHHhhcCCCc-CHHHHHHHHHHHhC--------cChhhE
Confidence 3457899999999986 45555555431 1124579876 46899999999984 689999
Q ss_pred EEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCc---ccCHHHHHHHHHHHHhcCCc
Q 011570 123 VMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDF---KVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~---~~d~~~l~~~i~~~~~~~~~ 199 (483)
++|+|+++++.+++.++. +||.|++++|+|+.|...++.. |++++++++++++++ ..+++.+++.. .+
T Consensus 78 ~it~G~~~~i~~~~~~l~-~g~~vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-------~~ 148 (360)
T PRK07392 78 LPGNGAAELLTWAGRELA-QLRAVYLITPAFGDYRRALRAF-GATVKELPLPLDQPSPGLTLRLQTLPPQL-------TP 148 (360)
T ss_pred EECCCHHHHHHHHHHHhC-CCCeEEEECCCcHHHHHHHHHc-CCeEEEEecccccCCcccccCHHHHHHhc-------cC
Confidence 999999999999998865 6899999999999999999986 999999999866654 24555554332 26
Q ss_pred eeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccc
Q 011570 200 IKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKD 279 (483)
Q Consensus 200 ~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~ 279 (483)
+++++++|||||||.+++++++.+++ +++++ +|+||+|.++.+++ . ..+...... ..+++|+++||||.
T Consensus 149 ~~~~~l~nP~NPTG~~~~~~~l~~l~---~~~~~-~IiDE~y~~~~~~~-~-~~s~~~~~~-----~~~~vi~i~S~SK~ 217 (360)
T PRK07392 149 NDGLLLNNPHNPTGKLWSREAILPLL---EQFAL-VVVDEAFMDFLPPD-A-EQSLIPCLA-----EYPNLIILRSLTKF 217 (360)
T ss_pred CCEEEEeCCCCCCCCCcCHHHHHHHH---HHCCE-EEEECchhhhccCc-c-ccchHHHhh-----cCCCEEEEEechhh
Confidence 78999999999999999977665554 56775 66799999976654 2 234443333 35789999999999
Q ss_pred cCCCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceee
Q 011570 280 MGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCL 358 (483)
Q Consensus 280 ~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~ 358 (483)
||++|+|+||++++ +.+.+.+......+.++.++|.++..++.+..+ .++.++.++++++.+.+.|+++ |+.+.
T Consensus 218 ~~l~GlRiG~~v~~-~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 292 (360)
T PRK07392 218 YSLPGLRLGYAIAH-PDRLQRWQQWRDPWPVNGLAAAAAIAALADRDF----QQQTWAWLPPAREALFQGLASLPGLTPL 292 (360)
T ss_pred hcCCchheeeeeCC-HHHHHHHHhhCCCCCCCHHHHHHHHHHhccHHH----HHHHHHHHHHHHHHHHHHHHhCCCcEEC
Confidence 99999999999995 555555655555567899999999999987654 4445567888899999999887 77766
Q ss_pred cCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 359 KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 359 ~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
+ .+++|+|++++. +..+++..+++++||.|.||..|+..+++|+||+++ +.++.+.+.+.|++++
T Consensus 293 ~-~~~~fl~~~~~~--------~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~~~l~~al~~~~ 357 (360)
T PRK07392 293 P-SAANFLLVQSQG--------SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVR--TEAENQRLLEALAAIL 357 (360)
T ss_pred C-CCCCEEEEEcCC--------CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence 5 677899998863 134778888888899999999997656789999998 4444555555555544
No 71
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=3.4e-46 Score=374.11 Aligned_cols=334 Identities=17% Similarity=0.295 Sum_probs=265.9
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
+.++++|+.|+|+++ ++.+.+++.+.. .....|++. +..+||++||++++ +++++|+
T Consensus 19 ~~~~i~l~~~~~~~~~p~~~~~a~~~~~-------------~~~~~y~~~-~~~~lr~~ia~~~~--------~~~~~i~ 76 (356)
T PRK08056 19 PDQLLDFSANINPLGMPVSLKRAIIDNL-------------DCAERYPDV-EYRHLHQALARHHQ--------VPASWIL 76 (356)
T ss_pred hhhEEEeccccCCCCCCHHHHHHHHHHH-------------HhcccCcCc-cHHHHHHHHHHHhC--------cChhhEE
Confidence 456799999999986 455555554311 123468764 68999999999985 6899999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.++ .+|+ +++++|+|..|...++.. |++++.+|++++++|.+| +.+++.+. +++|+|
T Consensus 77 it~Ga~~~l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~-~~~~~~~~------~~~k~v 146 (356)
T PRK08056 77 AGNGETESIFAVVSGL-KPRR-AMIVTPGFAEYRRALQQV-GCEIRRYSLREADGWQLT-DAILEALT------PDLDCL 146 (356)
T ss_pred ECCCHHHHHHHHHHHh-CCCC-EEEeCCCcHHHHHHHHHc-CCeEEEEecccccCCCcc-HHHHHhcc------CCCCEE
Confidence 9999999999999887 6776 788899999998888876 999999999766677777 34445443 378999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
+++|||||||.+++.+++++|+++|++++++||+||+|.++.+.. ..+.+ ... ..+++++++||||.||++
T Consensus 147 ~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~~~~~---~~~-----~~~~~i~~~S~SK~~~~~ 217 (356)
T PRK08056 147 FLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDE-TGFIP---QLA-----DNPHLWVLRSLTKFYAIP 217 (356)
T ss_pred EEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcc-hHHHH---Hhc-----cCCCEEEEEechhhccCc
Confidence 999999999999999999999999999999999999999875543 22222 222 246899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCc
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNA 362 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~ 362 (483)
|+|+||++++++.+.+.+.+....+.++.++|.++..++.+..+ .++.++.++++++++.+.|+++ |+.+.++ +
T Consensus 218 G~RiG~~v~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~ 292 (356)
T PRK08056 218 GLRLGYLVNSDDAAVARMRRQQMPWSINAFAALAGEVILQDRAY----QQATWQWLAEEGARFYQALCALPLLTVWPG-R 292 (356)
T ss_pred chhheeeecCCHHHHHHHHHhCCCCchhHHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-C
Confidence 99999999865566666655555566888899998888876554 5677788899999999999887 7777666 5
Q ss_pred eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 363 GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 363 g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
|+|+|++++.. ..++++.|++ +||.|++|..|....++|+||+++ ++++.+.++++|+++++
T Consensus 293 ~~~~~~~~~~~--------~~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 293 ANYLFLRCERP--------DIDLQRALLT-QRILIRSCANYPGLDSRYYRVAIR--SAAENERLLAALRNVLT 354 (356)
T ss_pred CcEEEEEcCCC--------hHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEEc--CHHHHHHHHHHHHHHHc
Confidence 68999998731 2367777774 699999999996555679999998 77889999999987654
No 72
>PLN02368 alanine transaminase
Probab=100.00 E-value=3.1e-46 Score=377.61 Aligned_cols=282 Identities=21% Similarity=0.375 Sum_probs=234.2
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-CCCCeEEEeCCCCcChHHHHhhhcC
Q 011570 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-DPGDAFLVPTPYYPGFDRDLRWRTG 165 (483)
Q Consensus 87 ~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~~~~~~~~~~~G 165 (483)
...|++..|.++||++||+|+.+.+| +.+++++|++|+|+++++..++.+++ +|||.|++++|+|+.|...+... |
T Consensus 100 ~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~-g 176 (407)
T PLN02368 100 LGAYSDSRGLPGVRKEVAEFIERRDG--YPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLL-G 176 (407)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcC--CCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHc-C
Confidence 56799999999999999999988766 56789999999999999999999987 79999999999999999999886 9
Q ss_pred cEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc
Q 011570 166 VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV 245 (483)
Q Consensus 166 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~ 245 (483)
+++++++++++.+|.+|++.|++++++...++.++|+++++|||||||.+++.+++++|+++|++||++||+||+|.++.
T Consensus 177 ~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~ 256 (407)
T PLN02368 177 GTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNI 256 (407)
T ss_pred CEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 99999999877789999999999997543344478999999999999999999999999999999999999999999988
Q ss_pred cCCCCCcchHHHhhhhccc--cCCCeEEEEecCcccc-CCCCceEEEEEe--cChHHHHHHHHhh-hcCCCChHHHHHHH
Q 011570 246 FTKESSFVSIAEIIDQDIA--CNRNLIHIVYSLSKDM-GFPGFRVGIIYS--YNDQVVSCARKMS-SFGLVSSQTQHLIA 319 (483)
Q Consensus 246 ~~~~~~~~s~~~l~~~~~~--~~~~~vi~~~S~SK~~-g~~GlRiG~li~--~~~~l~~~~~~~~-~~~~~s~~~q~~~~ 319 (483)
|++...+.|+.++...+.. ...+++|+++||||+| |++|||+||+++ .++.+.+.+.+.. ..+.++.++|.++.
T Consensus 257 y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~~~~~~~~~Q~aa~ 336 (407)
T PLN02368 257 YQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVASIALSPNVSGQIFMG 336 (407)
T ss_pred cCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhcccCCCCcHHHHHHH
Confidence 8752245676654321100 0135899999999998 899999999995 2555655555543 33557889999999
Q ss_pred HhcCChh----HH---HHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecC
Q 011570 320 TMLSDDQ----FV---EKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLH 371 (483)
Q Consensus 320 ~~l~~~~----~~---~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~ 371 (483)
+++.... .+ .+..++..+.+++|++.+.+.|.++ |+.+..|+|+||+|++++
T Consensus 337 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~ 396 (407)
T PLN02368 337 LMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK 396 (407)
T ss_pred HHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence 9997531 11 2223456789999999999999998 999999999999998665
No 73
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.8e-46 Score=375.37 Aligned_cols=341 Identities=18% Similarity=0.230 Sum_probs=263.9
Q ss_pred Ccccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEe
Q 011570 47 GVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMS 125 (483)
Q Consensus 47 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it 125 (483)
.+++|+.|+|+++ ++.+.+++.+.... ......|++ .|.++||++||+|+++.++.++.+++++|++|
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it 97 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQ----------GIESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVG 97 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhh----------cccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEc
Confidence 4789999999986 45566655431100 001346865 69999999999999977643466899999999
Q ss_pred CChhHHHHHHHHHhcCCCC-eEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 126 GGATGAHETVAFCLADPGD-AFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 126 ~G~~~al~~~~~~l~~~gd-~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
+|+++++..++.+++.+|| .|++++|+|+.|...++.. |++++.+++++ ++|.+|+++|++++.+.. ..++|+|+
T Consensus 98 ~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~--~~~~k~i~ 173 (374)
T PRK02610 98 NGSDELIRSLLIATCLGGEGSILVAEPTFSMYGILAQTL-GIPVVRVGRDP-ETFEIDLAAAQSAIEQTQ--NPPVRVVF 173 (374)
T ss_pred CChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHc-CCEEEEecCCc-ccCCCCHHHHHHHHHhhc--CCCceEEE
Confidence 9999999988888888886 8999999999999998886 99999999864 458999999999886421 13789999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
+||||||||.+++.++++++++++ ++++||+||+|.++.+ . ..+..+. ..+++|+++||||+||+||
T Consensus 174 l~~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~---~--~~~~~~~------~~~~~ivi~SfSK~~g~~G 240 (374)
T PRK02610 174 VVHPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQ---T--TLVGELA------QHPNWVILRTFSKAFRLAA 240 (374)
T ss_pred EeCCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCc---c--chHHHHh------cCCCEEEEEecchhccCcc
Confidence 999999999999999999999876 4899999999988532 1 1222232 2367889999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCce
Q 011570 285 FRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAG 363 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g 363 (483)
+|+||+++ ++.+.+.+......+.+++++|.++..++.+.+ .+.+..+..+++ ++.+.+.|+.+ ++.+. |++|
T Consensus 241 lRiG~~v~-~~~l~~~l~~~~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~~-r~~l~~~L~~~~~~~~~-p~~g 314 (374)
T PRK02610 241 HRVGYAIG-HPELIAVLEKVRLPYNLPSFSQLAAQLALEHRQ---ELLAAIPEILQE-RDRLYQALQELPQLRVW-PSAA 314 (374)
T ss_pred cceeeeec-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHH---HHHHHHHHHHHH-HHHHHHHHHhCCCcEeC-CCcc
Confidence 99999998 566666666655556689999999999988643 344555545444 67788888876 67654 6778
Q ss_pred EEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 364 LFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 364 ~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
+|+|++++...+ ..+++..+ .++||.|+++ ++++||+++ +++++++++++|++++++.
T Consensus 315 ~f~~~~l~~~~~------~~~~~~~l-~~~gi~v~~~-------~~~lRls~~--~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 315 NFLYLRLSQDAA------LAALHQAL-KAQGTLVRHT-------GGGLRITIG--TPEENQRTLERLQAALTQL 372 (374)
T ss_pred eEEEEeCCCCCC------HHHHHHHH-HHCCEEEEeC-------CCeEEEeCC--CHHHHHHHHHHHHHHHhhc
Confidence 999999985322 23666665 4679999864 368999998 4678999999999988654
No 74
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=6.2e-46 Score=373.61 Aligned_cols=335 Identities=23% Similarity=0.374 Sum_probs=263.4
Q ss_pred CCCCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCC-cCCC
Q 011570 43 KNPNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRIT-FDPD 120 (483)
Q Consensus 43 ~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~-~~~~ 120 (483)
.++.++++|+.+++..+ ++.+.+.+.... ....|+++.|.++||+++|+|+.+.+| ++ ++++
T Consensus 24 ~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~--------------~~~~Y~~~~G~~~lr~~ia~~l~~~~~--~~~~~~~ 87 (364)
T PRK07865 24 AHPDGIVDLSVGTPVDPVPPVIQEALAAAA--------------DAPGYPTTAGTPELREAIVGWLARRRG--VTGLDPA 87 (364)
T ss_pred hcCCCEEEcCCCCCCCCCCHHHHHHHHHHH--------------hhCCCCCccCCHHHHHHHHHHHHHHcC--CCCCCcc
Confidence 34456799999976544 355555554311 124799999999999999999998776 54 7899
Q ss_pred cEEEeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 121 RIVMSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
+|++|+|+++++..++.++ +++||.|++++|+|+.|...++.. |++++.++. +++++. .+
T Consensus 88 ~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~---------~~~l~~---------~~ 148 (364)
T PRK07865 88 AVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLA-GATVVRADS---------LTELGP---------QR 148 (364)
T ss_pred cEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhc-CCEEEecCC---------hhhCCc---------cc
Confidence 9999999999999998888 799999999999999999888876 999888741 222221 26
Q ss_pred eeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccc
Q 011570 200 IKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKD 279 (483)
Q Consensus 200 ~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~ 279 (483)
+++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.+.+ .. .+..... ......+++|+++||||.
T Consensus 149 ~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~~-~~~~~~~--~~~~~~~~~i~~~S~SK~ 224 (364)
T PRK07865 149 PALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDA-EP-VSILDPR--VCGGDHTGLLAVHSLSKQ 224 (364)
T ss_pred ceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCC-CC-Ccccccc--ccCCccceEEEEeechhc
Confidence 7999999999999999999999999999999999999999999876654 22 2221110 000024789999999999
Q ss_pred cCCCCceEEEEEecChHHHHHHHHhh--hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcee
Q 011570 280 MGFPGFRVGIIYSYNDQVVSCARKMS--SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGC 357 (483)
Q Consensus 280 ~g~~GlRiG~li~~~~~l~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~ 357 (483)
||++|+|+||++++ +.+.+.+.... ..+.++++.|.++..++.+.. ++++.++.++++++.+.+.|++.|+.+
T Consensus 225 ~~~~GlRiG~i~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~g~~~ 299 (364)
T PRK07865 225 SNLAGYRAGFVAGD-PALVAELLEVRKHAGMMVPAPVQAAMVAALGDDA----HVREQRERYARRRAVLRPALEAAGFRV 299 (364)
T ss_pred cCCCceeeEEEecC-HHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 99999999999984 55555554433 234578899999999998744 356777888999999999999999988
Q ss_pred ecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHH
Q 011570 358 LKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRIT 431 (483)
Q Consensus 358 ~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~ 431 (483)
..++||+|+|++++.. ..+++..+ .++||.|.||..|+...++++||+++. +++++++++++|+
T Consensus 300 ~~~~~~~~~~~~~~~~--------~~~~~~~l-~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~~~~~~~~l~ 363 (364)
T PRK07865 300 DHSEAGLYLWATRGED--------CWDTVAWL-AERGILVAPGDFYGPAGAQHVRVALTA-TDERIAAAVERLA 363 (364)
T ss_pred cCCCccEEEEEeCCCC--------HHHHHHHH-HHCCEEEeCccccCcCCCCEEEEEecC-CHHHHHHHHHHhh
Confidence 8899999999987421 12455555 467999999998875567899999984 7899999999985
No 75
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=4.4e-46 Score=381.66 Aligned_cols=356 Identities=17% Similarity=0.247 Sum_probs=267.2
Q ss_pred CCcccccchhhhhcHH-HHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHH-HHHhhhCCCCCcCCC--c
Q 011570 46 NGVIQMGLAENLLCHE-LVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAK-FMGKVRGNRITFDPD--R 121 (483)
Q Consensus 46 ~~~i~l~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~-~~~~~~g~~~~~~~~--~ 121 (483)
.++|+++.+++.++++ .+.++.... . ..+|+++.|..++++++++ |+.+.++. ....++ +
T Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~-------------~--~~~Y~~p~g~~~~~e~iv~~y~~~~~~~-~~~~~~~~~ 157 (521)
T TIGR03801 94 RDIISYVIDQLGFDPDAFLYEMCDGI-------------I--GDNYPVPDRMLPHSEKIVHQYLIQEMCG-NKPPPGEFD 157 (521)
T ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHh-------------h--cCCCCCCCCCHHHHHHHHHHHHHhhccC-CCCCCCcCe
Confidence 3468888888777643 343333321 0 1258877788888888874 65654431 112334 8
Q ss_pred EEEeCChhHHHHHHHHH-----hcCCCCeEEEeCCCCcChHHHHhhh-cCcEEEEeecCCCCC-----cccCHHHHHHHH
Q 011570 122 IVMSGGATGAHETVAFC-----LADPGDAFLVPTPYYPGFDRDLRWR-TGVQLVPVVCDSSND-----FKVTMEALEAAY 190 (483)
Q Consensus 122 i~it~G~~~al~~~~~~-----l~~~gd~Vlv~~P~y~~~~~~~~~~-~G~~~~~v~~~~~~~-----~~~d~~~l~~~i 190 (483)
|++|+|+++++..++.+ +++|||+|++++|+|+.|...+... .|.++++++.+++.+ |.+|++++++++
T Consensus 158 V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~ 237 (521)
T TIGR03801 158 LFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLR 237 (521)
T ss_pred EEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhc
Confidence 99999999999999887 7899999999999999999886653 378888888765433 999999998865
Q ss_pred HHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc--CcEEEEccccccCccCCCCCcchHHHhhhhccccCCC
Q 011570 191 EKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK--NIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRN 268 (483)
Q Consensus 191 ~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~--~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~ 268 (483)
. +++|+|+++|||||||.+++.+++++|+++|++| +++||+||+|.++.+ .+.|+.... .+
T Consensus 238 ~------~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~----~~~sl~~~~-------~~ 300 (521)
T TIGR03801 238 D------PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD----DFRSLFAEL-------PY 300 (521)
T ss_pred C------CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc----cccchhhhC-------CC
Confidence 4 3899999999999999999999999999999986 999999999998543 234554442 36
Q ss_pred eEEEEecCccccCCCCceEEEEEecChHHHH------------HH------------------------HHhhh--cCCC
Q 011570 269 LIHIVYSLSKDMGFPGFRVGIIYSYNDQVVS------------CA------------------------RKMSS--FGLV 310 (483)
Q Consensus 269 ~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~------------~~------------------------~~~~~--~~~~ 310 (483)
++|+++||||.||++|||+||++++++.+.+ .+ ++... ...+
T Consensus 301 ~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~ 380 (521)
T TIGR03801 301 NTIGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGL 380 (521)
T ss_pred CEEEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCC
Confidence 8999999999999999999999997553211 11 11111 1335
Q ss_pred ChHHHH-----HHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhh---ccCh---
Q 011570 311 SSQTQH-----LIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLK---EQTY--- 379 (483)
Q Consensus 311 s~~~q~-----~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~---~~~~--- 379 (483)
+++.|. ++.+++... +.+.++.++.+++|++.+.+.|. ..+...++.|+||+|++++.... +..+
T Consensus 381 s~p~Q~q~al~a~~all~~~---~~y~~~~~~~~~~R~~~l~~~Lg-~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~ 456 (521)
T TIGR03801 381 STPQQVQMALFSLFALMDKE---NAYKAETKDICRRREKLLFRGLG-LPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSY 456 (521)
T ss_pred CcHHHHHHHHHHHHHHhccc---hhHHHHHHHHHHHHHHHHHHhcC-CCCcCCCCCeEEEEEeehHHHHHHhcchHHHHH
Confidence 667665 344555432 45678888999999999999882 23334678999999999985321 0000
Q ss_pred ----HHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhh
Q 011570 380 ----EAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 380 ----~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
.++.+++.+|++++||.+.||..|+.. .+++|||++..+++++.++.++|++++++..+
T Consensus 457 l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~-~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 457 LKKNYSPVDVLFRLAEETGIVLLPGGGFGGP-EWSVRVSLANLNEYDYAEIGRAIRKILDEYYE 519 (521)
T ss_pred HhccCCHHHHHHHHHHhCCEEEeCchhcCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHHHH
Confidence 125689999999999999999999853 56899999867899999999999999987654
No 76
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9e-46 Score=373.66 Aligned_cols=327 Identities=19% Similarity=0.260 Sum_probs=261.2
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
+.++|+|+.|+|+++ ++.+.+.+... .....|+++ +..+||++||++++ +++++|+
T Consensus 51 ~~~~i~l~~n~~p~~~~~~v~~a~~~~--------------~~~~~Yp~~-~~~~lr~~ia~~~~--------~~~~~I~ 107 (380)
T PLN03026 51 PEDIVKLDANENPYGPPPEVLEALGNM--------------KFPYVYPDP-ESRRLRAALAEDSG--------LESENIL 107 (380)
T ss_pred ccceEEccCCCCCCCCCHHHHHHHHhh--------------HhhccCCCC-CHHHHHHHHHHHhC--------cChhhEE
Confidence 457899999999985 45555555431 123458765 68999999999986 5789999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.+++++||+|++++|+|+.|...++.. |++++.+++++ +|.+|++.+++++.. .++++|
T Consensus 108 ~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~~~~-----~~~~~v 179 (380)
T PLN03026 108 VGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVN-GAEVIKVPRTP--DFSLDVPRIVEAVET-----HKPKLL 179 (380)
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHc-CCEEEEeecCC--CCCcCHHHHHHHHhc-----cCCcEE
Confidence 9999999999999999999999999999999888877775 99999999853 578999999998842 278999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
+++|||||||.+++.+++.+|++.+ ++||+||+|.++.+.. +...... ..+++|+++||||.||++
T Consensus 180 ~l~~P~NPTG~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~-----~~~~~~~-----~~~~viv~~SfSK~~gla 245 (380)
T PLN03026 180 FLTSPNNPDGSIISDDDLLKILELP----ILVVLDEAYIEFSTQE-----SRMKWVK-----KYDNLIVLRTFSKRAGLA 245 (380)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHhcC----CEEEEECcchhhcCCc-----chHHHHH-----hCCCEEEEecchHhhcCc
Confidence 9999999999999999999998753 8999999999864432 1122222 358899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-ceeecCCc
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVG-IGCLKSNA 362 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~~~~~~ 362 (483)
|+|+||++++ +.+.+.+.+....+.++.++|.++.++|.+.++ +++.++.++++++++.+.|++++ +.+ .+.+
T Consensus 246 GlRiGy~~~~-~~~i~~l~~~~~~~~~~~~~q~aa~~aL~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~ 319 (380)
T PLN03026 246 GLRVGYGAFP-LSIIEYLWRAKQPYNVSVAAEVAACAALSNPKY----LEDVKNALVEERERLFGLLKEVPFLEP-YPSD 319 (380)
T ss_pred cccceeeecC-HHHHHHHHHhcCCCCCCHHHHHHHHHHhhCHHH----HHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCC
Confidence 9999999994 556666666665667899999999999987544 56777888999999999999885 444 5667
Q ss_pred eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 363 GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 363 g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
++|+|++++...+ ..++++.|+ ++||.|++|..++ .++++|||++ ++++++.++++|+++
T Consensus 320 ~~f~~~~~~~~~~------~~~~~~~l~-~~gI~v~~~~~~~--~~~~lRis~~--~~~~~~~l~~al~~~ 379 (380)
T PLN03026 320 ANFILCRVTSGRD------AKKLKEDLA-KMGVMVRHYNSKE--LKGYIRVSVG--KPEHTDALMEALKQL 379 (380)
T ss_pred CeEEEEECCCCCC------HHHHHHHHH-HCCeEEEECCCCC--CCCEEEEecC--CHHHHHHHHHHHHHh
Confidence 7899999874221 236777777 6799999987632 4679999998 677888888887653
No 77
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.7e-46 Score=374.61 Aligned_cols=334 Identities=19% Similarity=0.297 Sum_probs=268.0
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
+.++|+|+.|+|++. ++.+.+++.+.. .....|++..| .+||+++|++++ +++++|+
T Consensus 35 ~~~~i~l~~~~~~~~~~~~~~~al~~~~-------------~~~~~Y~~~~g-~~lr~~ia~~~~--------~~~~~i~ 92 (371)
T PRK05166 35 VPRIAKLGSNENPLGPSPAVRRAFADIA-------------ELLRLYPDPQG-RALREAIAARTG--------VPADRII 92 (371)
T ss_pred CcceEEcCCCCCCCCCCHHHHHHHHHHH-------------HHhhcCCCCcH-HHHHHHHHHHhC--------cCHHHEE
Confidence 347899999999874 455666554311 13457999888 599999999875 5789999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.+++++||.|+++.|+|+.+...++.. |.+++.++++. ++.+|++++++++.+ ++++|
T Consensus 93 ~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~-g~~~~~v~~~~--~~~~~~~~l~~~~~~------~~~~v 163 (371)
T PRK05166 93 LGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMM-GARVERVTVTP--DLGFDLDALCAAVAR------APRML 163 (371)
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHc-CCeEEEeecCC--CCCCCHHHHHHhhhc------CCCEE
Confidence 9999999999999999999999999999999998888876 99999999864 467999999998864 67899
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
+++|||||||.+++.+++++|+++|++ +++||+||+|.++.++. .+.+....... ..+++|+++||||.||++
T Consensus 164 ~l~~p~NPtG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~--~~~~~~~~~~~----~~~~vi~i~SfSK~~~l~ 236 (371)
T PRK05166 164 MFSNPSNPVGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGD--DYPSALTLLKA----RGLPWIVLRTFSKAYGLA 236 (371)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCc--CcccHHHHHhh----cCCCEEEEeechHhhhcc
Confidence 999999999999999999999999874 88999999999876543 23344433221 236899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCce
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAG 363 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g 363 (483)
|+|+||++++++.+.+.+.+....+.++.++|.++.+++.+.++ +++.++.++++++.+.+.|++.|+.+.+ .+|
T Consensus 237 GlRiG~~i~~~~~l~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~g~~~~p-~~g 311 (371)
T PRK05166 237 GLRVGYGLVSDPELVGLLDRVRTPFNVNGAAQAAALAALDDEEH----LAKGVALALAERERLKKELAEMGYRIAP-SRA 311 (371)
T ss_pred hhheeeeecCCHHHHHHHHHhccCCCCCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHCcCeeCC-CcC
Confidence 99999998767777777766665666899999888888876554 5666677888889999999988887654 556
Q ss_pred EEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 364 LFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 364 ~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
+|+|++++.. ..++++.+++ +||.|+||..++ .++++||+++ +.++.+.+++.|+.++
T Consensus 312 ~fl~~~~~~~--------~~~l~~~l~~-~gi~v~p~~~~~--~~~~iRi~~~--~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 312 NFLFFDARRP--------ASAVAEALLR-QGVIVKPWKQPG--FETFIRVSIG--SPEENDHFVAALDKVL 369 (371)
T ss_pred CEEEEeCCCC--------HHHHHHHHHH-CCeEEecCCCCC--CCCeEEEEcC--CHHHHHHHHHHHHHHh
Confidence 8999997631 2367777775 599999997654 4689999998 5667777777776654
No 78
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=6.5e-46 Score=372.24 Aligned_cols=336 Identities=22% Similarity=0.368 Sum_probs=263.3
Q ss_pred CCCCCCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCC-cC
Q 011570 41 PTKNPNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRIT-FD 118 (483)
Q Consensus 41 ~~~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~-~~ 118 (483)
..+++.++++|+.+++..+ ++.+.+.+.+. .....|+++.|.++||+++++|+.+++| ++ ++
T Consensus 16 ~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~--------------~~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~~ 79 (357)
T TIGR03539 16 AASHPDGIVDLSVGTPVDPVPPLIRAALAAA--------------ADAPGYPQTWGTPELREAIVDWLERRRG--VPGLD 79 (357)
T ss_pred hhhCCCCeEEccCCCCCCCCCHHHHHHHHHH--------------HhhCCCCcccCCHHHHHHHHHHHHHhcC--CCCCC
Confidence 3455677899999876554 34455554431 1235799999999999999999988776 54 78
Q ss_pred CCcEEEeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 119 PDRIVMSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
+++|++|+|+++++..++.++ +++||.|++++|+|+.+...++.. |++++.++ +++.+..
T Consensus 80 ~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~v~---------~~~~l~~--------- 140 (357)
T TIGR03539 80 PTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLA-GATPVAAD---------DPTELDP--------- 140 (357)
T ss_pred cCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhc-CCEEeccC---------ChhhcCc---------
Confidence 999999999999999999888 799999999999999998888775 99988764 2222221
Q ss_pred CceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCc
Q 011570 198 IRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLS 277 (483)
Q Consensus 198 ~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~S 277 (483)
.++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|.+ .. .+... ........+++|+++|||
T Consensus 141 ~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~~-~~~~~--~~~~~~~~~~vi~~~S~S 216 (357)
T TIGR03539 141 VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEG-RP-VSILD--PRVCGGDHTGLLAVHSLS 216 (357)
T ss_pred cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCC-CC-cccee--cccCCCccccEEEEeccc
Confidence 267999999999999999999999999999999999999999998876654 32 22111 100000246899999999
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 011570 278 KDMGFPGFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGI 355 (483)
Q Consensus 278 K~~g~~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi 355 (483)
|.||++|+|+||++++ +.+.+.+..... .+.++++.|.++..++.+..+ +++.+..++++++++.+.|.+.|+
T Consensus 217 K~~~~~G~R~G~~i~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~L~~~g~ 291 (357)
T TIGR03539 217 KRSNLAGYRAGFVAGD-PALVAELLTVRKHAGLMVPAPVQAAMVAALGDDGH----VAEQKARYAARRAQLKPALEKAGF 291 (357)
T ss_pred cccCCCceeEEEEecC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHcCCHHH----HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999984 555555544332 245788999999999976443 566778889999999999998899
Q ss_pred eeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHH
Q 011570 356 GCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRI 430 (483)
Q Consensus 356 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L 430 (483)
.+.+|.||+|+|++++.. ..++...| .++||.|.||..|+...++++||+++. +++++++++++|
T Consensus 292 ~~~~p~~~~~~~~~~~~~--------~~~~~~~l-~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~~i~~~~~~l 356 (357)
T TIGR03539 292 RIDHSEAGLYLWATRGED--------AWDTVDRL-AELGILVAPGDFYGPAGSQHVRVALTA-TDERIAAAVARL 356 (357)
T ss_pred CCcCCCccEEEEEECCCC--------HHHHHHHH-HhCCEEECCccccCCCCCCeEEEEecC-CHHHHHHHHHhh
Confidence 989999999999998631 22566555 467999999998876557899999985 789999999887
No 79
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.3e-45 Score=377.97 Aligned_cols=358 Identities=18% Similarity=0.274 Sum_probs=264.8
Q ss_pred CCcccccchhhhh-c--HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcE
Q 011570 46 NGVIQMGLAENLL-C--HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRI 122 (483)
Q Consensus 46 ~~~i~l~~~~n~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i 122 (483)
.++|+|+.+.+.. + .+.+.+++....... ........|+++.|.++||++||+|+.+.+| +.+++++|
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g--~~v~~~~I 100 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASG-------KLTEALGNYDGPQGKDELIEALAALLNERYG--WNISPQNI 100 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCc-------ccccccccCCCCCCCHHHHHHHHHHHHHHhC--CCCChhhE
Confidence 4679999887643 2 234445443311100 0002346799999999999999999988777 56899999
Q ss_pred EEeCChhHHHHHHHHHhcC-----CCCeEEE-eCCCCcChHHHHhhh---cCcEEEEeecCCC-CCcccCHHHHHHHHHH
Q 011570 123 VMSGGATGAHETVAFCLAD-----PGDAFLV-PTPYYPGFDRDLRWR---TGVQLVPVVCDSS-NDFKVTMEALEAAYEK 192 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~-----~gd~Vlv-~~P~y~~~~~~~~~~---~G~~~~~v~~~~~-~~~~~d~~~l~~~i~~ 192 (483)
++|+|+++++.+++.++++ +||.|++ ++|+|+.|...+... .+.....++++.+ .+|.+|++.|+ +.
T Consensus 101 ~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~- 177 (416)
T PRK09440 101 ALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID- 177 (416)
T ss_pred EEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cC-
Confidence 9999999999999999985 6899999 799999998755422 0122222233322 14789999887 22
Q ss_pred HHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEE
Q 011570 193 AQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHI 272 (483)
Q Consensus 193 ~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~ 272 (483)
.++++++++|||||||.+++.+++++|+++|++++++||+||+|.+. +.. ..+.+ .... ..+++|+
T Consensus 178 -----~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~-~~~-~~~~~---~~~~----~~~~vI~ 243 (416)
T PRK09440 178 -----EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPP-FPG-IIFSE---ATPL----WNPNIIL 243 (416)
T ss_pred -----CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCcccc-CCC-cchhh---cCcc----ccCCeEE
Confidence 36799999999999999999999999999999999999999999753 211 11111 1110 1478999
Q ss_pred EecCccccCCCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHH-HHHHHHHHHHHHHHh
Q 011570 273 VYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAE-SAKRIAERHKAFTWG 349 (483)
Q Consensus 273 ~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~-~~~~l~~~~~~l~~~ 349 (483)
++||||. ++||+|+||+++ ++.+.+.+...... ..++.+.|.+++.++.++++ .++..+ .+..++++++.+.+.
T Consensus 244 ~~SfSK~-~~pGlRiG~~i~-~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~r~~~~~~~ 320 (416)
T PRK09440 244 CMSLSKL-GLPGVRCGIVIA-DEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDL-LRLSETVIRPFYRQKVQLAIAL 320 (416)
T ss_pred Eeccccc-CCCcceEEEEeC-CHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999996 899999999999 45566655554432 45788999999999998776 344433 577788888888888
Q ss_pred hhcC----CceeecCCceEEEeeecCch-hhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCC-------CCEEEEEecc
Q 011570 350 LSQV----GIGCLKSNAGLFLWMDLHHL-LKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPN-------PGWFRVCFAN 417 (483)
Q Consensus 350 L~~~----gi~~~~~~~g~f~~~~l~~~-~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~-------~~~iRis~~~ 417 (483)
|.+. ++.+..|+||+|+|++++.. .+ +.++...+ +++||.|.||+.|+... .+++||+++.
T Consensus 321 L~~~l~~~~~~~~~p~gg~fiw~~~~~~~~~------~~~~~~~l-~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~ 393 (416)
T PRK09440 321 LRRYLPDEPCLIHKPEGAIFLWLWFKDLPIT------TEELYQRL-KARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ 393 (416)
T ss_pred HHHhcccCCeEEecCCCceEEEEECCCCCCC------HHHHHHHH-HHCCEEEechHhhCCCCccccCCcCceEEEEecC
Confidence 8653 46677899999999999852 21 23666665 46799999999985421 3589999984
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhc
Q 011570 418 MDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 418 ~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
+++++++++++|++++++..++
T Consensus 394 -~~~~l~~~i~~l~~~~~~~~~~ 415 (416)
T PRK09440 394 -DDEEIEKGIAILAEEVEKAYAE 415 (416)
T ss_pred -CHHHHHHHHHHHHHHHHHHhhc
Confidence 8899999999999999876554
No 80
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3e-45 Score=367.97 Aligned_cols=327 Identities=19% Similarity=0.282 Sum_probs=259.9
Q ss_pred CcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeC
Q 011570 47 GVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSG 126 (483)
Q Consensus 47 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~ 126 (483)
+.++++.|+|+++++.. . ...+..|+++. ..+||++||++++ +++++|++|+
T Consensus 32 ~~~~~~~ne~~~~~~~~-----~--------------~~~~~~Y~~~~-~~~lr~~ia~~~~--------~~~~~I~~t~ 83 (364)
T PRK04781 32 GDVWLNANESAWANPAD-----P--------------DASTRRYPDPQ-PPGLRSALAALYG--------CAPEQLLIGR 83 (364)
T ss_pred CCEEeeCCCCCCCCChh-----h--------------cchhccCCCCC-HHHHHHHHHHHhC--------cChHHEEEeC
Confidence 56899999999875321 0 01346788765 6999999999985 6889999999
Q ss_pred ChhHHHHHHHHHhcCCC-CeEEEeCCCCcChHHHHhhhcCcEEEEeecC-CCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 127 GATGAHETVAFCLADPG-DAFLVPTPYYPGFDRDLRWRTGVQLVPVVCD-SSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 127 G~~~al~~~~~~l~~~g-d~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+++++..++.+++.+| |.|++++|+|+.|...++.. |.+++++|++ ++++|.+|++++++.+.. .++++|+
T Consensus 84 G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~d~~~l~~~~~~-----~~~~lv~ 157 (364)
T PRK04781 84 GSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQ-NAPLVEVPLVDGADGFHADVPAIVAAALA-----SNAKLVF 157 (364)
T ss_pred CHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHc-CCEEEEEecCCCccCCCcCHHHHHHHHhc-----cCCeEEE
Confidence 99999999999999999 79999999999888877775 9999999985 345688899988765532 3789999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
++|||||||.+++.++++++++.|+ ++++||+||+|.++.+. . +...+.. ..+++|+++||||+||+||
T Consensus 158 l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~--~---~~~~~~~-----~~~~vi~~~SfSK~~gl~G 226 (364)
T PRK04781 158 LCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDV--P---SAVGLLA-----RYDNLAVLRTLSKAHALAA 226 (364)
T ss_pred EcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCC--c---chHHHHh-----hCCCEEEEecChhhccccc
Confidence 9999999999999999999999986 47899999999986532 2 2223323 3578999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCce
Q 011570 285 FRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAG 363 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g 363 (483)
+|+||+++ ++.+.+.+.+....+.+++++|.++..++.++.+ . +..+..+.++++++.+.+.|+++ |+....|.+|
T Consensus 227 lRvGy~v~-~~~l~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~-~-~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g 303 (364)
T PRK04781 227 ARIGSLIA-NAELIAVLRRCQAPYPVPTPCAALAEQALSAPAL-A-VTARRVAEVRAERERLHAALAQLPGVRRVYPSQG 303 (364)
T ss_pred ceeeeeeC-CHHHHHHHHhccCCCCCCHHHHHHHHHHHhcccH-H-HHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCC
Confidence 99999998 5667777777766677899999999889987542 2 23445557788999999999888 6653456667
Q ss_pred EEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 364 LFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 364 ~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
+|+|++++. ..++.+.+. ++||.|+||..|.. .++|+||+++ ++++++.++++|+++.
T Consensus 304 ~f~~~~~~~---------~~~~~~~l~-~~gI~v~~~~~~~~-~~~~~Ris~~--~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 304 NFLLVRFDD---------AEAAFQALL-AAGVVVRDQRAAPR-LSDALRITLG--TPEQNDRVLAALQRTQ 361 (364)
T ss_pred cEEEEEcCC---------HHHHHHHHH-HCCeEEeeCCCCCC-CCCeEEEeCC--CHHHHHHHHHHHHHHH
Confidence 999999873 124555554 67999999987753 4679999998 6788899888887643
No 81
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=7.9e-45 Score=368.33 Aligned_cols=328 Identities=20% Similarity=0.218 Sum_probs=258.5
Q ss_pred ccccCCCCCCcHHHHHHHHHHHHhhhCCCCC-cCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhc
Q 011570 86 GIAIFQDYHGLPEFRNAVAKFMGKVRGNRIT-FDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRT 164 (483)
Q Consensus 86 ~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~-~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~ 164 (483)
...+|+++.|.++||+++++++.+..+ ... .+.++|++|+|+++++.+++.++++|||.|++++|+|+.|...+....
T Consensus 36 ~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~ 114 (388)
T PRK08637 36 EIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRR 114 (388)
T ss_pred cccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhc
Confidence 456899999999999999999876432 111 123689999999999999999999999999999999999998765324
Q ss_pred CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhh-----cCcEEEEcc
Q 011570 165 GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINE-----KNIHLVCDE 239 (483)
Q Consensus 165 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~-----~~~~iI~De 239 (483)
|.+++++|+..+ ++++|++.++++++.. ..+..++++++|||||||.+++.+++++|+++|++ |+++||+||
T Consensus 115 g~~vv~v~~~~~-~~~~d~~~l~~~~~~~--~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De 191 (388)
T PRK08637 115 GAEIVTYPIFDE-DGGFDTDALKEALQAA--YNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDD 191 (388)
T ss_pred CCEEEEecccCC-CCcCCHHHHHHHHHhh--ccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecc
Confidence 999999998422 3468999999988621 11244567888999999999999999999998875 899999999
Q ss_pred ccccCccCCCCCcchHH-HhhhhccccCCCeE--EEEecCccccCCCCceEEEEEecC-----hHHHHHHHH-h-----h
Q 011570 240 IYAATVFTKESSFVSIA-EIIDQDIACNRNLI--HIVYSLSKDMGFPGFRVGIIYSYN-----DQVVSCARK-M-----S 305 (483)
Q Consensus 240 ay~~~~~~~~~~~~s~~-~l~~~~~~~~~~~v--i~~~S~SK~~g~~GlRiG~li~~~-----~~l~~~~~~-~-----~ 305 (483)
+|.++.|++ ....++. .+.. ..+++ ++++||||.|++||+|+||+++++ +.+.+.+.. . .
T Consensus 192 ~Y~~l~~~~-~~~~~~~~~~~~-----~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 265 (388)
T PRK08637 192 AYFGLFYED-SYKESLFAALAN-----LHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRS 265 (388)
T ss_pred cchhcccCC-ccchhhHHHhhc-----ccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhc
Confidence 999988876 4434432 2322 23564 455799999999999999999743 555555432 1 1
Q ss_pred hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC----CceeecCCceEEEeeecCchhhccChHH
Q 011570 306 SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV----GIGCLKSNAGLFLWMDLHHLLKEQTYEA 381 (483)
Q Consensus 306 ~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----gi~~~~~~~g~f~~~~l~~~~~~~~~~~ 381 (483)
..+.++.++|.++..++.++.+ .+++++.+..++++++.+.+.|.+. ++.+.+|++|+|+|++++. . +
T Consensus 266 ~~~~~s~~~q~a~~~~l~~~~~-~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~-~------~ 337 (388)
T PRK08637 266 NISNGPHPSQSAVLRALNSPEF-DKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKG-V------D 337 (388)
T ss_pred ccCCCCcHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCCh-H------H
Confidence 2346889999999999988765 5667777888999999999888765 5788899999999999973 1 2
Q ss_pred HHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 382 EMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 382 ~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
..++++.+++++||.+.+. +++++||+++..+++++++++++|++++++.
T Consensus 338 ~~~l~~~l~~~~gv~~~~~------~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 338 AEELRVHLLEKYGIGTIAL------NETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred HHHHHHHHhhhcceEEEec------cCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 3478888887889988742 3568999998778999999999999999764
No 82
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.3e-45 Score=369.32 Aligned_cols=344 Identities=27% Similarity=0.458 Sum_probs=275.4
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++++|+.+.+.++ ++.+.+.+...... .......|++..|.+++|++++++++..++ ..+++++|++
T Consensus 33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~---------~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~--~~~~~~~i~~ 101 (394)
T PRK06836 33 DNVFDFSLGNPSVPPPAAVKEALRELAEE---------EDPGLHGYMPNAGYPEVREAIAESLNRRFG--TPLTADHIVM 101 (394)
T ss_pred CCeEEecCcCCCCCCCHHHHHHHHHHHhc---------CCcCcccCCCCCCCHHHHHHHHHHHHHHhC--CCCCcCcEEE
Confidence 35688888866543 45555555432110 001246798889999999999999998776 4578999999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++.+++++||.|++++|+|..+...++.. |++++.++++++ +|.+|++++++++.+ ++++|+
T Consensus 102 t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~-g~~v~~v~~~~~-~~~~d~~~l~~~~~~------~~~~v~ 173 (394)
T PRK06836 102 TCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNH-GGKLVVVPTDTD-TFQPDLDALEAAITP------KTKAVI 173 (394)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHc-CCEEEEEecCCc-cCcCCHHHHHhhcCc------CceEEE
Confidence 999999999999999999999999999999999888875 999999998754 478999999998854 789999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhh------cCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCcc
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINE------KNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSK 278 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~------~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK 278 (483)
+++||||||.++|.+++++|+++|++ ||++||+||+|.++.|.+ ....++.+ ..+++++++||||
T Consensus 174 ~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~--------~~~~~i~~~S~SK 244 (394)
T PRK06836 174 INSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDG-AEVPYIFK--------YYDNSIVVYSFSK 244 (394)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCC-CCCCChHH--------ccCcEEEEecchh
Confidence 99999999999999999999999998 899999999999987765 33333332 2368999999999
Q ss_pred ccCCCCceEEEEEecChHHHHH---HHH---hh---hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHh
Q 011570 279 DMGFPGFRVGIIYSYNDQVVSC---ARK---MS---SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWG 349 (483)
Q Consensus 279 ~~g~~GlRiG~li~~~~~l~~~---~~~---~~---~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~ 349 (483)
.||+||+|+||++++++ +.+. ... .. ..+.++++.|.++..++.+.. .+..++++++.+.+.
T Consensus 245 ~~~~pGlRiG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~--------~~~~~~~~r~~l~~~ 315 (394)
T PRK06836 245 SLSLPGERIGYIAVNPE-MEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDATV--------DVSIYKRNRDLLYDG 315 (394)
T ss_pred hccCcceeeEEEecCHH-HhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCChH--------HHHHHHHHHHHHHHH
Confidence 99999999999999543 3221 111 11 123577889999999987632 134577788999999
Q ss_pred hhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHH
Q 011570 350 LSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSR 429 (483)
Q Consensus 350 L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~ 429 (483)
|+++|+.+.++.||+|+|++++.. + ..+++..+ +++||.|.||..|+. ++++||+++ .+++++++++++
T Consensus 316 L~~~g~~~~~~~gg~~~~~~~~~~-~------~~~~~~~l-~~~gv~v~~g~~f~~--~~~iRi~~~-~~~~~~~~~i~~ 384 (394)
T PRK06836 316 LTELGFECVKPQGAFYLFPKSPEE-D------DVAFCEKA-KKHNLLLVPGSGFGC--PGYFRLSYC-VDTETIERSLPA 384 (394)
T ss_pred HHhCCCEeecCCceEEEEEeCCCC-C------HHHHHHHH-HhCCEEEECchhcCC--CCeEEEEec-CCHHHHHHHHHH
Confidence 998899999999999999998752 1 23566554 567999999999863 579999998 699999999999
Q ss_pred HHHHHHHh
Q 011570 430 ITSFMLKN 437 (483)
Q Consensus 430 L~~~l~~~ 437 (483)
|+++++++
T Consensus 385 l~~~l~~~ 392 (394)
T PRK06836 385 FEKLAKEY 392 (394)
T ss_pred HHHHHHHh
Confidence 99999765
No 83
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-45 Score=370.66 Aligned_cols=328 Identities=18% Similarity=0.288 Sum_probs=264.7
Q ss_pred Ccccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEe
Q 011570 47 GVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMS 125 (483)
Q Consensus 47 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it 125 (483)
++++|+.|+|+++ ++.+.+++.+.. ... .|.+..|.++||+++|++++ +++++|++|
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~-------------~~~-~~~p~~g~~~lr~~ia~~~~--------~~~~~i~~t 87 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHL-------------DEL-ALYPDGYAPELRTKVAKHLG--------VDEEQLLFG 87 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHH-------------HHh-hcCCCCcHHHHHHHHHHHhC--------CCHHHEEEC
Confidence 6789999999884 455666554311 122 34455689999999999985 578999999
Q ss_pred CChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 011570 126 GGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLI 205 (483)
Q Consensus 126 ~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l 205 (483)
+|+++++..++.+++++||.|++++|+|+.+...+... |.+++.+|++ ++.+|++.+++++.+ +++++++
T Consensus 88 ~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~-g~~~~~~~~~---~~~~d~~~l~~~~~~------~~~~v~i 157 (359)
T PRK03158 88 AGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAIIE-GAEVREVPLK---DGGHDLEAMLKAIDE------QTKIVWI 157 (359)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHc-CCeEEEEecC---CCCcCHHHHHHhcCC------CCCEEEE
Confidence 99999999999999999999999999999998888775 9999999986 356899999887753 7889999
Q ss_pred eCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCc
Q 011570 206 TNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGF 285 (483)
Q Consensus 206 ~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~Gl 285 (483)
+|||||||.+++.+++.++++.++ +|++||+||+|.++.+.+ .. .+...+.. ..+++++++||||.||++|+
T Consensus 158 ~~p~NPtG~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~-~~-~~~~~~~~-----~~~~vi~~~S~SK~~g~~Gl 229 (359)
T PRK03158 158 CNPNNPTGTYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAE-DY-PDTLPLLE-----KYENLIVLRTFSKAYGLAAL 229 (359)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCc-cc-ccHHHHHH-----hcCCEEEEEechHhhcCcch
Confidence 999999999999999999998875 699999999999876654 22 23223322 34789999999999999999
Q ss_pred eEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEE
Q 011570 286 RVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLF 365 (483)
Q Consensus 286 RiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f 365 (483)
|+||+++ ++.+.+.+......+.+++++|.++..++.+.++ .++.++.++++++.+.+.|.+.|+.+.++. |+|
T Consensus 230 RiG~~v~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-g~~ 303 (359)
T PRK03158 230 RVGYGIA-SEELIEKLNIARPPFNTTRIAQYAAIAALEDQAF----LKECVEKNAEGLEQYYAFCKEYGLFYYPSQ-TNF 303 (359)
T ss_pred hhehhcC-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHCCCeeCCCc-CcE
Confidence 9999999 4566666666555566899999999999987655 455566677888889999988888876554 579
Q ss_pred EeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 366 LWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
+|++++. + ..++++.|++ +||.|+||+.|+ .++++||+++ +.++++.++++|+++
T Consensus 304 i~~~~~~--~------~~~~~~~l~~-~gv~v~~g~~f~--~~~~iRi~~~--~~~~~~~l~~al~~~ 358 (359)
T PRK03158 304 IFVDTGR--D------ANELFEALLK-KGYIVRSGAALG--FPTGVRITIG--LKEQNDKIIELLKEL 358 (359)
T ss_pred EEEECCC--C------HHHHHHHHHH-CCeEEeeCCCCC--CCCeEEEecC--CHHHHHHHHHHHHHh
Confidence 9998852 1 2367777774 699999999986 3679999998 789999999999875
No 84
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.4e-46 Score=370.28 Aligned_cols=320 Identities=17% Similarity=0.290 Sum_probs=258.7
Q ss_pred CcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeC
Q 011570 47 GVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSG 126 (483)
Q Consensus 47 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~ 126 (483)
+.++|+.|||+++++.. +.. .....||+.. ..+|++.+|++++ +++++|++|+
T Consensus 29 ~~~~l~~Nenp~~~~~~---~~~---------------~~~~~Yp~~~-~~~l~~~~a~~~g--------~~~~~I~~~~ 81 (351)
T PRK01688 29 GDVWLNANEYPTAVEFQ---LTQ---------------QTLNRYPECQ-PKAVIENYAAYAG--------VKPEQVLVSR 81 (351)
T ss_pred CceEecCCCCCCCCChh---hcc---------------cccccCCCCC-hHHHHHHHHHHhC--------CCHHHEEEcC
Confidence 45899999999975431 110 2356798765 4899999999876 6899999999
Q ss_pred ChhHHHHHHHHHhcCCC-CeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 011570 127 GATGAHETVAFCLADPG-DAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLI 205 (483)
Q Consensus 127 G~~~al~~~~~~l~~~g-d~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l 205 (483)
|+++++.+++.+++++| |.|+++.|+|+.|...++.. |++++.+|+++ +|.+|++.+++++. ++++|++
T Consensus 82 Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~-G~~~~~v~~~~--~~~~d~~~l~~~~~-------~~~lv~l 151 (351)
T PRK01688 82 GADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETI-GVEIRTVPTLD--NWQLDLPAIADNLD-------GVKVVYV 151 (351)
T ss_pred CHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHc-CCEEEEeecCC--CCCCCHHHHHHhcc-------CCcEEEE
Confidence 99999999999999997 99999999999999888876 99999999864 58899999988762 6899999
Q ss_pred eCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCc
Q 011570 206 TNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGF 285 (483)
Q Consensus 206 ~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~Gl 285 (483)
||||||||.+++.+++++|++.|++ +.+||+||+|.++ .. . .+...+.. .++++++++||||.||++|+
T Consensus 152 ~nPnNPTG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f--~~-~--~s~~~~~~-----~~~n~iv~rSfSK~~glaGl 220 (351)
T PRK01688 152 CSPNNPTGNLINPQDLRTLLELTRG-KAIVVADEAYIEF--CP-Q--ASLAGWLA-----EYPHLVILRTLSKAFALAGL 220 (351)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECchhhc--CC-C--CChHHHHh-----hCCCEEEEecchHhhcCHHH
Confidence 9999999999999999999999986 6789999999885 33 2 23344433 45799999999999999999
Q ss_pred eEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceE
Q 011570 286 RVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGL 364 (483)
Q Consensus 286 RiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~ 364 (483)
|+||+++ ++.+.+.+.+....+.++.++|.++..+|.+.. .+++++.++.++++++++.+.|+++ |+....|.+++
T Consensus 221 RiGy~i~-~~~~i~~l~~~~~~~~v~~~~~~~a~~~L~~~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~n 297 (351)
T PRK01688 221 RCGFTLA-NEEVINLLLKVIAPYPLSTPVADIAAQALSPQG--IAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETN 297 (351)
T ss_pred HHhHHhC-CHHHHHHHHhccCCCCCCHHHHHHHHHHHhcch--HHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCc
Confidence 9999998 566667677766667788888888888887642 2346667778888899999999988 66534455677
Q ss_pred EEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHH
Q 011570 365 FLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRI 430 (483)
Q Consensus 365 f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L 430 (483)
|+|++++. ..++++.|+ ++||.|+++..|.. .++|+||+++ ++++++.++++|
T Consensus 298 fi~~~~~~---------~~~l~~~L~-~~gi~vr~~~~~~~-~~~~iRis~~--~~~e~~~l~~al 350 (351)
T PRK01688 298 YILARFTA---------SSAVFKSLW-DQGIILRDQNKQPG-LSNCLRITIG--TREECQRVIDAL 350 (351)
T ss_pred EEEEEcCC---------HHHHHHHHH-HCCeEEEECCCcCC-CCCeEEEeCC--CHHHHHHHHHhh
Confidence 99998862 236777777 56999998776532 3679999998 789999999887
No 85
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.6e-45 Score=365.83 Aligned_cols=338 Identities=19% Similarity=0.252 Sum_probs=268.2
Q ss_pred Ccccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEe
Q 011570 47 GVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMS 125 (483)
Q Consensus 47 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it 125 (483)
..++|+.|+|+++ ++.+.+++.+.... .......|++ .|.++||++||+|+.+.+| +++++++|++|
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~---------~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~--~~~~~~~I~it 94 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAE---------AAAGLNRYPD-RDAVALRADLAAYLTAQTG--VGLTVENVWAA 94 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhh---------hhhhhccCCC-CchHHHHHHHHHHhhhhcc--CCCChhhEEEC
Confidence 4589999999986 45566666542110 0013467876 4889999999999988776 56789999999
Q ss_pred CChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 011570 126 GGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLI 205 (483)
Q Consensus 126 ~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l 205 (483)
+|+++++.+++.+++++||.|+++.|+|+.|...+... |.++++++.+ .+|.+|++.+++++.+ .++++|++
T Consensus 95 ~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~-g~~~~~~~~~--~~~~~d~~~l~~~~~~-----~~~~~i~l 166 (368)
T PRK03317 95 NGSNEILQQLLQAFGGPGRTALGFVPSYSMHPIIARGT-HTEWVEGPRA--ADFTLDVDAAVAAIAE-----HRPDVVFL 166 (368)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHhc-CCeeEEcccC--CCCCCCHHHHHHHHhc-----cCCCEEEE
Confidence 99999999999999999999999999999999888875 9999988864 3678999999998864 26789999
Q ss_pred eCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCc
Q 011570 206 TNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGF 285 (483)
Q Consensus 206 ~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~Gl 285 (483)
+|||||||.+++.+++++|++.| +++||+||+|.++.+.+ . .+...+.. ..+++++++||||.||++|+
T Consensus 167 ~~p~NPtG~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~-~--~~~~~~~~-----~~~~~i~~~SfSK~~g~~Gl 235 (368)
T PRK03317 167 TSPNNPTGTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSG-T--PSALTLLP-----EYPRLVVSRTMSKAFAFAGG 235 (368)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHC---CceEEEeCCchhhcccC-C--cCHHHHHH-----hCCCEEEEEechhhhccchh
Confidence 99999999999999999998877 68999999999865543 2 23333333 24689999999999999999
Q ss_pred eEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEE
Q 011570 286 RVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLF 365 (483)
Q Consensus 286 RiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f 365 (483)
|+||+++ ++.+.+.+......+.+++++|.++.+++.+.+. ..+.++.+.++++.+.+.|++.|+.+.++.++++
T Consensus 236 RiG~~~~-~~~~~~~l~~~~~~~~~s~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 310 (368)
T PRK03317 236 RLGYLAA-APAVVDALRLVRLPYHLSAVTQAAARAALRHADE----LLASVAALRAERDRVVAWLRELGLRVAPSDANFV 310 (368)
T ss_pred hhhhhhC-CHHHHHHHHhcCCCCCCCHHHHHHHHHHhhCHHH----HHHHHHHHHHHHHHHHHHHHHCCCEeCCCCCcEE
Confidence 9999999 5666666665554556899999999899876432 2344456788889999999989999888999988
Q ss_pred EeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 366 LWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
+|.+++. ...+.+.++ ++||.|+++. .++++||+++ +.++++.++++|+++++..
T Consensus 311 ~~~~~~~---------~~~~~~~l~-~~Gv~v~~~~-----~~~~iRi~~~--~~~~~~~~~~~l~~~~~~~ 365 (368)
T PRK03317 311 LFGRFAD---------RHAVWQGLL-DRGVLIRDVG-----IPGWLRVTIG--TPEENDAFLAALAEVLATE 365 (368)
T ss_pred EEeccCC---------HHHHHHHHH-HCCEEEEeCC-----CCCeEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 8876642 235666666 5699998742 2579999997 7788999999999887654
No 86
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.4e-45 Score=365.92 Aligned_cols=333 Identities=20% Similarity=0.251 Sum_probs=264.4
Q ss_pred Ccccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEe
Q 011570 47 GVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMS 125 (483)
Q Consensus 47 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it 125 (483)
.+++|+.|+|+++ ++.+.+++.+.. .....|+++ +.++||++||++++ +++++|++|
T Consensus 33 ~~~~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~Y~~~-~~~~Lr~~ia~~~~--------~~~~~I~it 90 (369)
T PRK08153 33 FRARIGANESGFGPSPSVIAAMREAA-------------AEIWKYGDP-ENHDLRHALAAHHG--------VAPENIMVG 90 (369)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHH-------------HHhhcCCCC-ccHHHHHHHHHHhC--------CCHHHEEEc
Confidence 4579999999986 445555554311 123568876 47999999999985 688999999
Q ss_pred CChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 011570 126 GGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLI 205 (483)
Q Consensus 126 ~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l 205 (483)
+|+++++..++.++++|||.|+++.|+|+.+...+... |.+++.+|++.+ .+|++.+++.+.+ .++++|++
T Consensus 91 ~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~-g~~~~~vp~~~~---~~~~~~l~~~~~~-----~~~~~i~l 161 (369)
T PRK08153 91 EGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFNYHVAGF-GGRLVTVPYRDD---REDLDALLDAARR-----ENAPLVYL 161 (369)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEECCCcchHHHHHHHHc-CCeEEEeeCCCC---CCCHHHHHHHhcc-----cCCcEEEE
Confidence 99999999999999999999999999999999888875 999999998643 3788888776643 37889999
Q ss_pred eCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCc
Q 011570 206 TNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGF 285 (483)
Q Consensus 206 ~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~Gl 285 (483)
+|||||||.+++.+++.+|++.|+ ++++||+||+|.++.+.+ .+.+ +.. ..+++++++||||.||++|+
T Consensus 162 ~~P~NPtG~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~--~~~~---~~~-----~~~~~i~~~SfSK~~g~~Gl 230 (369)
T PRK08153 162 ANPDNPMGSWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAG--AAPP---IDT-----DDPNVIRMRTFSKAYGLAGA 230 (369)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCcc--cchh---hhh-----cCCCEEEEecchHhccCcch
Confidence 999999999999999999999887 489999999999865543 2222 222 24689999999999999999
Q ss_pred eEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEE
Q 011570 286 RVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLF 365 (483)
Q Consensus 286 RiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f 365 (483)
|+||+++ ++.+.+.+......+.+++++|.++..++.+..+ +++.++.++++++.+.+.|++.|+.+. |.+++|
T Consensus 231 RiG~~v~-~~~~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~~~~~L~~~g~~~~-p~~~~f 304 (369)
T PRK08153 231 RVGYAIG-APGTIKAFDKVRNHFGMNRIAQAAALAALKDQAY----LAEVVGKIAAARDRIAAIARANGLTPL-PSATNF 304 (369)
T ss_pred heeeeec-CHHHHHHHHHhhcCCCCCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHCCCccC-CCcCcE
Confidence 9999999 4556666655555566899999999999986544 566778888999999999998888755 567789
Q ss_pred EeeecCchhhccChHHHHHHHHHHHHhcCeEee-CCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhh
Q 011570 366 LWMDLHHLLKEQTYEAEMALWRVIINEVKLNVS-PGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~-pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+|++++... .....+.+.+++ +||.++ ||.. ..++++||+++ ++++++.++++|++++...+
T Consensus 305 ~~~~~~~~~-----~~a~~l~~~l~~-~Gi~v~~p~~~---~~~~~iRis~~--~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 305 VAIDCGRDG-----AFARAVLDGLIA-RDIFVRMPGVA---PLDRCIRVSCG--PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred EEEECCCCc-----ccHHHHHHHHHH-CCeEEeeCCCC---CCCCeEEEecC--CHHHHHHHHHHHHHHHHHhh
Confidence 999986310 112366777664 699995 6542 23569999998 78999999999999887554
No 87
>PLN02397 aspartate transaminase
Probab=100.00 E-value=6.8e-44 Score=364.39 Aligned_cols=316 Identities=18% Similarity=0.242 Sum_probs=245.9
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCc-----EEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHh
Q 011570 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDR-----IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLR 161 (483)
Q Consensus 87 ~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~-----i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~ 161 (483)
..+|++..|.++||+++++|+..... ...++++ +++|+|+.+ +...+..++.|||+|++++|+|+.|...++
T Consensus 84 ~~~Y~~~~G~~~LR~aia~~~~~~~~--~~~~~~~i~~~~i~~g~Ga~~-l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~ 160 (423)
T PLN02397 84 NKEYLPIEGLAEFNKLSAKLAYGADS--PAIKENRVATVQCLSGTGSLR-LGAEFLARFYPGSTIYIPNPTWGNHHNIFR 160 (423)
T ss_pred CCCCCCcCCCHHHHHHHHHHHcCCCC--chhhcCeeEeeecccchHHHH-HHHHHHHHhCCCCEEEEeCCCchhHHHHHH
Confidence 45799999999999999999864432 1122333 334444443 344444555799999999999999999999
Q ss_pred hhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccc
Q 011570 162 WRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIY 241 (483)
Q Consensus 162 ~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay 241 (483)
.. |++++++++.+.++|.+|++.+++.+.+. ..+++++++++||||||.+++.+++++|+++|++||++||+||+|
T Consensus 161 ~~-g~~~~~v~l~~~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y 236 (423)
T PLN02397 161 DA-GVPVRTYRYYDPKTRGLDFDGLLEDLKAA---PDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAY 236 (423)
T ss_pred Hc-CCeEEEeecccCcCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccc
Confidence 86 99999999843345889999999887643 236788899999999999999999999999999999999999999
Q ss_pred ccCccCCC-CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEE--ecChHHHH----HHHHhhh--cCCCCh
Q 011570 242 AATVFTKE-SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIY--SYNDQVVS----CARKMSS--FGLVSS 312 (483)
Q Consensus 242 ~~~~~~~~-~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li--~~~~~l~~----~~~~~~~--~~~~s~ 312 (483)
.++.|++. ..+.++..+.. ..+++|+++||||+|+++|||+||++ +++..+.. .+..... ..+++.
T Consensus 237 ~~l~~~~~~~~~~~~~~~~~-----~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (423)
T PLN02397 237 QGFASGDLDADAQSVRMFVE-----DGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPI 311 (423)
T ss_pred CCccCCchhhhhHHHHHHHh-----cCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcH
Confidence 99877431 12334444432 23579999999999999999999995 44444332 2222222 234677
Q ss_pred HHHHHHHHhcCChhHHHHH---HHHHHHHHHHHHHHHHHhhhcCC----ceeecCCceEEEeeecCchhhccChHHHHHH
Q 011570 313 QTQHLIATMLSDDQFVEKF---IAESAKRIAERHKAFTWGLSQVG----IGCLKSNAGLFLWMDLHHLLKEQTYEAEMAL 385 (483)
Q Consensus 313 ~~q~~~~~~l~~~~~~~~~---~~~~~~~l~~~~~~l~~~L~~~g----i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~ 385 (483)
+.|.+++.+|.++++.+.+ +++.++.++++++.+.+.|+++| +.+..|+||||+|++++. ++
T Consensus 312 ~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~~-----------~~ 380 (423)
T PLN02397 312 HGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGLNK-----------EQ 380 (423)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCCCH-----------HH
Confidence 8999999999887544344 67788999999999999999987 788889999999998852 58
Q ss_pred HHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 386 WRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 386 ~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
+.+|++++||.|.+ .+ |++++..+.+.+++++++|+++++
T Consensus 381 ~~~Ll~~~~V~v~~--------~~--Ri~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 381 VDRMTKEYHIYMTR--------DG--RISMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred HHHHHHhCCEEECC--------CC--eEEEeeCCHHHHHHHHHHHHHHHh
Confidence 89999999999862 22 999976899999999999999985
No 88
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-44 Score=362.25 Aligned_cols=328 Identities=18% Similarity=0.274 Sum_probs=261.6
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC-CcE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP-DRI 122 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~-~~i 122 (483)
+.++++|+.|+|+++ ++.+.+.+.+.... .....|++ .|.++||+++|+|++ +++ ++|
T Consensus 25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~-~~~~~lr~~ia~~~~--------~~~~~~I 84 (356)
T PRK04870 25 ATGMVKLDAMENPYRLPAELRAELGERLAE-----------VALNRYPD-PRAAALKAALRAAMG--------VPAGADV 84 (356)
T ss_pred CCCceeCcCCCCCCCCCHHHHHHHHHHhhc-----------cccccCCC-CCHHHHHHHHHHHhC--------cCCCCcE
Confidence 457899999999986 55566665542110 12467887 578999999999986 233 589
Q ss_pred EEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 123 VMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
++|+|+++++..++.+++++||+|++++|+|..|...++.. |++++++++++ +|.+|++.+++++.+ .++++
T Consensus 85 ~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~i~~~~--~~~~d~~~l~~~~~~-----~~~~~ 156 (356)
T PRK04870 85 LLGNGSDELIQLLALACAKPGATVLAPEPGFVMYRMSAKLA-GLEFVGVPLTA--DFTLDLPAMLAAIAE-----HRPAL 156 (356)
T ss_pred EEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHHHHHHHc-CCEEEEecCCC--CCCCCHHHHHHHhhc-----CCCCE
Confidence 99999999999999999999999999999999998888876 99999999874 578999999998864 27899
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
|+++|||||||.+++.+++++|+++| +.++|+||+|.++. . ..+.+ .+ . ..+++++++|||| +|+
T Consensus 157 v~l~~p~NPtG~~~~~~~~~~i~~~~---~~~ii~De~y~~~~--~-~~~~~--~~-~-----~~~~vi~~~S~SK-~~~ 221 (356)
T PRK04870 157 VFLAYPNNPTGNLFDDADVERIIEAA---PGLVVVDEAYQPFA--G-DSWLP--RL-A-----RFPNLLVMRTVSK-LGL 221 (356)
T ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHC---CCEEEEECCchhhc--C-cchHH--HH-h-----hCCCEEEEecchh-hhh
Confidence 99999999999999999999999988 67899999998743 2 22111 12 2 3468999999999 899
Q ss_pred CCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCC
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSN 361 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~ 361 (483)
+|+|+||++++ +.+.+.+......+.++.++|.++..++.+.++ +++.++.++++++.+.+.|+++ |+.+.+ .
T Consensus 222 ~GlRiG~~i~~-~~~i~~~~~~~~~~~~~~~~q~~a~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~ 295 (356)
T PRK04870 222 AGLRLGYLAGH-PAWIAELDKVRPPYNVNVLTQATALFALEHVDV----LDAQAAQLRAERTRLAAALAALPGVTVFP-S 295 (356)
T ss_pred HHHhhhhhhCC-HHHHHHHHHccCCCcCCHHHHHHHHHHHhCHHH----HHHHHHHHHHHHHHHHHHHHhCCCcEECC-C
Confidence 99999999994 556565655555566888999998888876443 5666777889999999999887 887654 5
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
+|+|+|++++. ..++...+ +++||.|++|..|+...++++||+++ +.++++.++++|+++
T Consensus 296 ~~~~~~~~~~~---------~~~~~~~l-~~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~ 355 (356)
T PRK04870 296 AANFILVRVPD---------AAAVFDGL-KTRGVLVKNLSGMHPLLANCLRVTVG--TPEENAQFLAALKAA 355 (356)
T ss_pred CCeEEEEECCC---------HHHHHHHH-HHCCEEEEECCCCCCCCCCeEEEeCC--CHHHHHHHHHHHHHh
Confidence 56799999872 12455554 57799999999986555789999998 788899999999765
No 89
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=3.5e-44 Score=358.82 Aligned_cols=324 Identities=21% Similarity=0.273 Sum_probs=255.8
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.+++||+.|+|+++ ++.+.+++.+.. .....|+++.|.++||+++|++++ +++++|++
T Consensus 22 ~~~~~l~~~~~~~~~~~~~~~~~~~~~-------------~~~~~Y~~~~g~~~lr~aia~~~~--------~~~~~I~i 80 (349)
T PRK07908 22 PGLLDFAVNVRHDTPPEWLRERLAARL-------------GDLAAYPSTEDERRARAAVAARHG--------RTPDEVLL 80 (349)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHh-------------hHhhcCCCccchHHHHHHHHHHhC--------cChhhEEE
Confidence 57899999999875 555666665421 234579988899999999999985 57999999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++.+++. +.+| .++++.|+|..+...++.. |++++.++++++ |.+|++.++ .++++++
T Consensus 81 t~Ga~~al~~~~~--l~~~-~viv~~P~y~~~~~~~~~~-G~~i~~v~~~~~--~~~d~~~l~----------~~~~~i~ 144 (349)
T PRK07908 81 LAGAAEGFALLAR--LRPR-RAAVVHPSFTEPEAALRAA-GIPVHRVVLDPP--FRLDPAAVP----------DDADLVV 144 (349)
T ss_pred CCCHHHHHHHHHh--cCCC-eEEEeCCCChHHHHHHHHc-CCEEEeeccCcc--cCcChhHhc----------cCCCEEE
Confidence 9999999999988 4665 5677899999998888875 999999998753 778887542 2678999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
++|||||||.++|.+++.++ |+ ++.++|+||+|.++.. + . ..++.+. ..+++++++||||.||++|
T Consensus 145 l~np~NPTG~~~~~~~l~~l---~~-~~~~iIvDe~y~~~~~-~-~-~~~l~~~-------~~~~~i~i~S~SK~~~l~G 210 (349)
T PRK07908 145 IGNPTNPTSVLHPAEQLLAL---RR-PGRILVVDEAFADAVP-G-E-PESLAGD-------DLPGVLVLRSLTKTWSLAG 210 (349)
T ss_pred EcCCCCCCCCCcCHHHHHHH---Hh-cCCEEEEECcchhhcc-C-C-ccccccc-------cCCCEEEEeecccccCCcc
Confidence 99999999999997766555 44 4778999999988633 2 2 2444332 3468999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceE
Q 011570 285 FRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGL 364 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~ 364 (483)
+|+||+++ ++.+.+.+......+.++++.+.++..++.+.. .+++++.++.++++++++.+.|.++|+++.+|.+|+
T Consensus 211 lRiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~ 287 (349)
T PRK07908 211 LRVGYALG-APDVLARLTRGRAHWPVGTLQLEAIAACCAPRA--VAEAAADAARLAADRAEMVAGLRAVGARVVDPAAAP 287 (349)
T ss_pred ceeeeeec-CHHHHHHHHhcCCCCCccHHHHHHHHHHhcccc--hHHHHHHHHHHHHHHHHHHHHHHhCCcEeccCCCce
Confidence 99999998 455666665555556678888888888877432 345777888999999999999998899888888899
Q ss_pred EEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 365 FLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 365 f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
|+|++++. ...+.. +++++||.|+||..|+..++++|||+++ +++++++++++|++++.
T Consensus 288 ~~~~~~~~---------~~~~~~-~l~~~gI~v~~g~~f~~~~~~~vRis~~--~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 288 FVLVRVPD---------AELLRK-RLRERGIAVRRGDTFPGLDPDYLRLAVR--PRAEVPVLVQALAEILK 346 (349)
T ss_pred EEEEECCc---------HHHHHH-HHHhCCEEEEECCCCCCCCCCeEEEEeC--CCccHHHHHHHHHHHHh
Confidence 99999974 113344 4567799999999986545789999997 77889999999987654
No 90
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=4e-44 Score=360.21 Aligned_cols=325 Identities=18% Similarity=0.253 Sum_probs=259.7
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++++|+.|+|+++ ++.+.+++.+.. .....|++.. .++||++|+++++ +++++|++
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~Y~~~~-~~~Lr~aia~~~~--------v~~e~I~i 100 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSA-------------ALSGRYDLEL-EDDLRTLFAAQEG--------LPADHVMA 100 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHH-------------HHhcCCCCch-HHHHHHHHHHHhC--------cChhhEEE
Confidence 57799999999886 555555554310 1224687654 8999999999875 68999999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++.+++++||.|++++|+|+.|...++.. |++++.+++++ +|.+|++.+++.. .++++|+
T Consensus 101 t~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~~-------~~~~~v~ 170 (370)
T PRK09105 101 YAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRAADAQ-GAPVAKVPLRA--DGAHDVKAMLAAD-------PNAGLIY 170 (370)
T ss_pred cCChHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHc-CCeEEEecCCC--CCCCCHHHHHhcC-------CCCCEEE
Confidence 999999999999999999999999999999999988876 99999999864 5788999987652 2678999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
+||||||||.+++.++++++++.++ ++++||+||+|.++ .. . .+..++.. ..+++++++||||.||++|
T Consensus 171 l~nP~NPTG~~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f--~~-~--~s~~~~~~-----~~~~vi~~~SfSK~~g~~G 239 (370)
T PRK09105 171 ICNPNNPTGTVTPRADIEWLLANKP-AGSVLLVDEAYIHF--SD-A--PSVVDLVA-----QRKDLIVLRTFSKLYGMAG 239 (370)
T ss_pred EeCCCCCCCcCcCHHHHHHHHHhCC-CCcEEEEECchHHh--cc-C--cchHHHHh-----hCCCEEEEecccHhhcCCc
Confidence 9999999999999999999998764 58999999999763 33 2 24444433 3578999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceE
Q 011570 285 FRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGL 364 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~ 364 (483)
+|+||+++ ++.+.+.+... ..+.++.++|.++..++.+.+ ++++.++.++++++++.+.|++.|+++.++++++
T Consensus 240 lRiG~~v~-~~~~i~~l~~~-~~~~~~~~~~~aa~~~L~~~~----~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~~f 313 (370)
T PRK09105 240 MRLGLAAA-RPDLLAKLARF-GHNPLPVPAAAAGLASLRDPK----LVPQRRAENAAVREDTIAWLKKKGYKCTPSQANC 313 (370)
T ss_pred cceeeeec-CHHHHHHHHhc-CCCCcCHHHHHHHHHHHhCHH----HHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCcE
Confidence 99999999 45566666555 344578888888888887644 4677778889999999999999999888888876
Q ss_pred EEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 365 FLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 365 f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
| |++++. + ..++++.|+++ ||.| |..|. ..++|+||+++ ++++++.++++|++++
T Consensus 314 ~-~~~~~~--~------~~~l~~~L~~~-gI~v--~~~~~-~~~~~~Ris~~--~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 314 F-MVDVKR--P------AKAVADAMAKQ-GVFI--GRSWP-IWPNWVRVTVG--SEEEMAAFRSAFAKVM 368 (370)
T ss_pred E-EEeCCC--C------HHHHHHHHHHC-CcEE--ecCCC-CCCCeEEEEcC--CHHHHHHHHHHHHHHh
Confidence 5 577752 1 23778888855 9998 34453 34689999998 6788999999888765
No 91
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-44 Score=358.37 Aligned_cols=325 Identities=17% Similarity=0.286 Sum_probs=256.9
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|+|+.++|+++ ++.+.+++.+... .....|++. |.++||++||++++ +++++|++
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~------------~~~~~y~~~-~~~~lr~aia~~~~--------~~~~~I~i 82 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALG------------DDLRLYPDP-NADALRQAIAAYYG--------LDPEQVFV 82 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhh------------hhhhcCCCC-cHHHHHHHHHHHhC--------CCHHHEEE
Confidence 56799999999986 5566666654211 124578766 56999999999986 68999999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++++++++||.|++++|+|+.|...++.. |++++.+++++ +|.+|++.+++ ++++|+
T Consensus 83 t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~----------~~~~v~ 149 (353)
T PRK05387 83 GNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYPVYAGLY-GIPYEEIPLDD--DFSIDVEDYLR----------PNGGII 149 (353)
T ss_pred cCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHHHHHHc-CCEEEEeecCC--CCCCCHHHHHh----------cCCEEE
Confidence 999999999999999999999999999999888877775 99999999864 57899998863 347899
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
++|||||||.+++.+++.+|++.++ +++||+||+|.+ |.+ ....+ +.. ..+++++++||||.||++|
T Consensus 150 ~~~P~NPtG~~~~~~~~~~l~~~~~--~~~livDe~y~~--~~~-~~~~~---~~~-----~~~~~i~~~S~SK~~~~~G 216 (353)
T PRK05387 150 FPNPNAPTGIALPLAEIERILAANP--DSVVVIDEAYVD--FGG-ESAIP---LID-----RYPNLLVVQTFSKSRSLAG 216 (353)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCC--CcEEEEeCcccc--cCC-cchHH---HHh-----hCCCEEEEEehhHhhcchh
Confidence 9999999999999999999998654 899999999976 444 22222 222 2467999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhh---cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 285 FRVGIIYSYNDQVVSCARKMSS---FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
+|+||+++ ++.+.+.+..... .+.++.++|.++..++.+.++ .++.++++.++++.+.+.|.+.|+++.+ .
T Consensus 217 lR~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~ 290 (353)
T PRK05387 217 LRVGFAIG-HPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAY----FEETRAKVIATRERLVEELEALGFEVLP-S 290 (353)
T ss_pred hhceeeec-CHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHCCCeECC-C
Confidence 99999998 5666666655442 245788999999899876554 4566777888999999999998987654 5
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
+++|+|++++.. +..++++.|. ++||.|++.... ..++++||+++ +++++++++++|+++++
T Consensus 291 ~~~~~~~~~~~~-------~~~~~~~~l~-~~gi~v~~~~~~--~~~~~iRis~~--~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 291 KANFVFARHPSH-------DAAELAAKLR-ERGIIVRHFNKP--RIDQFLRITIG--TDEEMEALVDALKEILA 352 (353)
T ss_pred cCcEEEEECCCC-------CHHHHHHHHH-HCCEEEEECCCC--CCCCeEEEEeC--CHHHHHHHHHHHHHHhh
Confidence 667999998731 1236777775 569999853221 23579999998 67999999999998765
No 92
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-43 Score=357.01 Aligned_cols=347 Identities=20% Similarity=0.288 Sum_probs=270.1
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
+.++|+|+.++|+++ ++.+.+++.+.... .....|+++.|.++||+++|++++ +++++|+
T Consensus 27 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~~ia~~l~--------~~~~~v~ 87 (380)
T PRK06225 27 DKEMIWMGQNTNHLGPHEEVREAMIRCIEE-----------GEYCKYPPPEGFPELRELILKDLG--------LDDDEAL 87 (380)
T ss_pred cCCeEEccCCCCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCcchHHHHHHHHHhcC--------CCCCcEE
Confidence 457899999999886 45555555442110 123568888899999999999976 5788999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecC-CCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCD-SSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
+|+|+++++..++.+++.+||+|++++|+|..+...+... |.++++++++ ++++|.+|++.+++.+.+ ++++
T Consensus 88 ~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~d~~~l~~~~~~------~~~~ 160 (380)
T PRK06225 88 ITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRF-GAEVIEVPIYSEECNYKLTPELVKENMDE------NTRL 160 (380)
T ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHHh-CceEEeeccccccCCccCCHHHHHhhcCC------CceE
Confidence 9999999999999999999999999999999888877775 9999999974 344688999999998753 6889
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
|+++|||||||.+++.+++++|+++|+++|+++|+||+|.++... . .+...+ ..++++++.||||.+|+
T Consensus 161 v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~--~--~~~~~~-------~~~~~i~~~s~SK~~g~ 229 (380)
T PRK06225 161 IYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFARE--H--TLAAEY-------APEHTVTSYSFSKIFGM 229 (380)
T ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhcc--C--Cchhhc-------CCCCEEEEeechhhcCC
Confidence 999999999999999999999999999999999999999875322 1 222222 24788999999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhh-hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Ccee-ec
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMS-SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGC-LK 359 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~-~~ 359 (483)
+|+|+||++++ +.+.+.+.... ...+++.++|.++..++... .++.++.++.++++++.+.+.|+++ |+.+ ..
T Consensus 230 ~G~RiG~i~~~-~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 305 (380)
T PRK06225 230 AGLRIGAVVAT-PDLIEVVKSIVINDLGTNVIAQEAAIAGLKVK---DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVY 305 (380)
T ss_pred ccceeEEEecC-HHHHHHHHHHHhcccCCCHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccC
Confidence 99999999995 55665554433 23457888998887777642 2345556666777788888888875 5432 23
Q ss_pred CCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC-CCCEEEEEeccCCHHHHHHHHHHHHHHHHHhh
Q 011570 360 SNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP-NPGWFRVCFANMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 360 ~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~-~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+.+|+|+|++++... .+..++...|. ++||.++||..|+.. +++++|++++ .+++++++++++|++++++.+
T Consensus 306 ~~~g~~~~~~~~~~~-----~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~-~~~e~l~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 306 PSHGNMMVIDISEAG-----IDPEDLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFS-IPREQVEVFCEEFPDVVETLR 378 (380)
T ss_pred CCCCeEEEEEccccc-----CCHHHHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeC-CCHHHHHHHHHHHHHHHHHhh
Confidence 456678999986421 11336777777 569999999876532 4579999998 488999999999999998765
Q ss_pred h
Q 011570 439 E 439 (483)
Q Consensus 439 ~ 439 (483)
+
T Consensus 379 ~ 379 (380)
T PRK06225 379 T 379 (380)
T ss_pred c
Confidence 3
No 93
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.1e-43 Score=357.80 Aligned_cols=334 Identities=22% Similarity=0.323 Sum_probs=267.8
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
+.++++|+.++|+++ ++.+.+.+.+.. .....|++.. ..+||+++|++++ +++++|+
T Consensus 31 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~y~~~~-~~~lr~~ia~~~~--------~~~~~i~ 88 (367)
T PRK02731 31 IADIIKLASNENPLGPSPKAIEAIRAAA-------------DELHRYPDGS-GFELKAALAEKFG--------VDPERII 88 (367)
T ss_pred CCceEEecCCCCCCCCCHHHHHHHHHHH-------------HhhcCCCCCc-HHHHHHHHHHHhC--------cCHHHEE
Confidence 456899999998876 344555554321 1245788765 4799999999985 5789999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.+++++||.|++++|+|..+...+... |.+++.++++ ++.+|++.+++++.+ ++++|
T Consensus 89 ~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~~---~~~~~~~~l~~~~~~------~~~~v 158 (367)
T PRK02731 89 LGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQAV-GAKPVEVPAK---DYGHDLDAMLAAVTP------RTRLV 158 (367)
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHHHc-CCeEEEeccc---CCCCCHHHHHHHhCC------CCcEE
Confidence 9999999999999999999999999999999888777765 9999999874 467999999998853 78999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
+++|||||||.+++.+++.++++.++ +|++||+||+|.++.+.+ ....++ .... ..+++++++||||.||++
T Consensus 159 ~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~-~~~~~~-~~~~-----~~~~~i~~~S~SK~~g~~ 230 (367)
T PRK02731 159 FIANPNNPTGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRK-DYEDGL-ELVA-----KFPNVVVTRTFSKAYGLA 230 (367)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCc-CcccHH-HHHh-----hcCCEEEEeeehHhhcCc
Confidence 99999999999999999999999875 699999999998876654 322333 2222 347899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCce
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAG 363 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g 363 (483)
|+|+||+++ ++.+.+.+......+.+++++|.++..++.+..+ .++.++.++++++.+.+.|++.|+.+.+ .+|
T Consensus 231 G~RiG~l~~-~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~g 304 (367)
T PRK02731 231 GLRVGYGIA-PPEIIDALNRVRQPFNVNSLALAAAVAALDDDAF----VEKSRALNAEGMAWLTEFLAELGLEYIP-SVG 304 (367)
T ss_pred ccceeeeeC-CHHHHHHHHHccCCCCCCHHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHHHHHHCCCccCC-CCc
Confidence 999999999 4566666666555556789999999999987544 5667778888899999999988988775 456
Q ss_pred EEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 364 LFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 364 ~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
+|+|++++...+ ..++++.|. ++||.|+++..|+ .++++||+++ +.++++.++++|+++++
T Consensus 305 ~~~~i~~~~~~~------~~~~~~~L~-~~gI~v~~~~~~~--~~~~iRis~~--~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 305 NFILVDFDDGKD------AAEAYQALL-KRGVIVRPVAGYG--LPNALRITIG--TEEENRRFLAALKEFLA 365 (367)
T ss_pred eEEEEECCCCCC------HHHHHHHHH-HCCEEEEeCCCCC--CCCeEEEecC--CHHHHHHHHHHHHHHHh
Confidence 899999964322 336777776 5699999998875 3579999997 77899999999998764
No 94
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=7.9e-44 Score=353.85 Aligned_cols=314 Identities=17% Similarity=0.233 Sum_probs=246.1
Q ss_pred CCCcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 45 PNGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
+.++++|+.|+|+++++.... . ...+..||+.. .+||+++|++++ + .++++|++
T Consensus 23 ~~~~i~ls~Nenp~~~~~~~~--~---------------~~~~~~Yp~~~--~~L~~~ia~~~~------~-~~~~~I~i 76 (339)
T PRK06959 23 YDAWLDLSTGINPHGYPVPPV--P---------------ADAWRRLPEDD--DGLAACAARYYG------A-PDAAHVLP 76 (339)
T ss_pred hhhhceeccCCCCCCCCCCCC--C---------------HHHHHhCCCch--HHHHHHHHHHhC------C-CCcccEEE
Confidence 456799999999987541000 0 01245698753 899999999987 2 14689999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..+.. ++++|| |+++.|+|+.|...++.. |++++++++++ +.+.+ .+++++
T Consensus 77 ~~Gs~e~i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~-g~~~~~v~~~~--------~~~~~----------~~~~v~ 135 (339)
T PRK06959 77 VAGSQAAIRALPA-LLPRGR-VGIAPLAYSEYAPAFARH-GHRVVPLDEAA--------DTLPA----------ALTHLI 135 (339)
T ss_pred CcCHHHHHHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHC-CCEEEeecccc--------hhccc----------cCCEEE
Confidence 9999999997765 568887 889999999999999886 99999988642 11211 457899
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
+||||||||.+++.+++++|++.|.+++.+||+||+|.++.+. .++..+. ..+++|+++||||.||+||
T Consensus 136 l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~-----~s~~~~~------~~~~vi~l~SfSK~~gl~G 204 (339)
T PRK06959 136 VVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA-----ASLAAHT------DRPGLVVLRSVGKFFGLAG 204 (339)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc-----ccchhcc------CCCCEEEEecChhhcCCcc
Confidence 9999999999999999999999998889999999999985321 2333332 2367999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceE
Q 011570 285 FRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGL 364 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~ 364 (483)
+|+||+++ ++.+.+.+.+....+.++.++|.++.++|.+.++ .++.++.++++++++.+.|+++|+++. .+++
T Consensus 205 lRiGy~v~-~~~li~~l~~~~~~~~vs~~~q~a~~~~L~~~~~----~~~~~~~~~~~r~~l~~~L~~~g~~~~--~~~~ 277 (339)
T PRK06959 205 VRAGFVLA-APALLAALRDALGAWTVSGPARHAVRAAFADAAW----QAAMRERLAADGARLAALLRAHGFAVH--ATPL 277 (339)
T ss_pred hheEEEec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCcHHH----HHHHHHHHHHHHHHHHHHHHHCCCCcc--Ccce
Confidence 99999999 5667777777666677899999999999987655 456778899999999999999988765 3568
Q ss_pred EEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhh
Q 011570 365 FLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 365 f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
|+|++++. ..++...|. ++||.|++ |+ ..+++||+++ .++++++.++++|+++++....
T Consensus 278 f~~~~~~~---------~~~l~~~l~-~~GI~vr~---~~--~~~~lRisi~-~~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 278 FSWTDDPR---------AAALHAALA-RRGIWTRY---FA--PPPSVRFGLP-ADEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred EEEEeCCC---------HHHHHHHHH-hCCeEEEE---CC--CCCeEEEECC-CCHHHHHHHHHHHHHHHHHHhh
Confidence 99998762 125667666 45999985 32 3469999994 2778999999999988776543
No 95
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-43 Score=355.18 Aligned_cols=320 Identities=19% Similarity=0.301 Sum_probs=253.4
Q ss_pred CCcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEe
Q 011570 46 NGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMS 125 (483)
Q Consensus 46 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it 125 (483)
.+.++|+.|+|+++++.. +. ......|++. +.++||+++|++++ +++++|++|
T Consensus 31 ~~~~~l~~ne~~~~~~~~---~~---------------~~~~~~Yp~~-~~~~Lr~aia~~~~--------~~~~~I~it 83 (354)
T PRK04635 31 RGDIWINANESPFNNEYK---LD---------------LARLNRYPEC-QPPELINAYSAYAG--------VAPEQILTS 83 (354)
T ss_pred CCcEEeeCCCCCCCCChh---hh---------------hHHhccCCCC-CHHHHHHHHHHHhC--------cCHHHEEEe
Confidence 356899999999875421 10 1234679876 47999999999875 689999999
Q ss_pred CChhHHHHHHHHHhcCCC-CeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 126 GGATGAHETVAFCLADPG-DAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 126 ~G~~~al~~~~~~l~~~g-d~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
+|++++|.+++.+++++| |.|+++.|+|+.|...++.. |++++.+|+++ +|.+|++.++. + .++++|+
T Consensus 84 ~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~-g~~v~~v~~~~--~~~~~~~~l~~-~-------~~~~li~ 152 (354)
T PRK04635 84 RGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETF-NVGVKALPLTA--DYQLPLDYIEQ-L-------DGAKLVF 152 (354)
T ss_pred CCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHc-CCEEEEEecCC--CCCCCHHHHHh-c-------cCCCEEE
Confidence 999999999999999999 99999999999998888775 99999999864 47789888862 2 2789999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
+||||||||.+++.+++++|++.|+ +++||+||+|.++. . . .+..++.. ..+++++++||||.||++|
T Consensus 153 i~nP~NPTG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~--~-~--~s~~~~~~-----~~~~~iv~~S~SK~~~l~G 220 (354)
T PRK04635 153 ICNPNNPTGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFC--P-E--YSVADLLA-----SYPNLVVLRTLSKAFALAG 220 (354)
T ss_pred EeCCCCCCCccCCHHHHHHHHHhCC--CcEEEEeCchHhhc--c-C--cchHHHHh-----hCCCEEEEechHHHhhhhH
Confidence 9999999999999999999999876 48999999998753 2 1 23333333 3578999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-ceeecCCce
Q 011570 285 FRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVG-IGCLKSNAG 363 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~~~~~~g 363 (483)
+|+||+++ ++.+.+.+......+.++.+.|.++..++.+... +++++.++.++++++.+.+.|++++ +++.+++|
T Consensus 221 lRlG~~i~-~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g- 296 (354)
T PRK04635 221 ARCGFTLA-NEELIEILMRVIAPYPVPLPVSEIATQALSEAGL--ARMKFQVLDLNAQGARLQAALSMYGGAKVLEGNG- 296 (354)
T ss_pred HHHhhhhC-CHHHHHHHHhhcCCCCCCHHHHHHHHHHHhcccH--HHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCC-
Confidence 99999999 5556666655555566788888888888876432 3356667788999999999999885 78777765
Q ss_pred EEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 364 LFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 364 ~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
+|+|++++. ..++.+. ++++||.|+++..+ ..++++|||++ ++++++.++++|++.
T Consensus 297 ~f~~~~~~~---------~~~~~~~-l~~~gv~v~~~~~~--~~~~~lRis~~--~~e~~~~l~~al~~~ 352 (354)
T PRK04635 297 NYVLAKFDD---------VDAVFKA-LWDAGIVARAYKDP--RLANCIRFSFS--NRAETDKLIGLIRNQ 352 (354)
T ss_pred cEEEEECCC---------HHHHHHH-HHHCCEEEEECCCC--CCCCeEEEEeC--CHHHHHHHHHHHHHh
Confidence 699998863 1245554 45779999876533 23579999998 789999999998753
No 96
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-42 Score=344.73 Aligned_cols=325 Identities=20% Similarity=0.327 Sum_probs=251.9
Q ss_pred cccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeC
Q 011570 48 VIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSG 126 (483)
Q Consensus 48 ~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~ 126 (483)
.++|+.|+|+++ ++.+.+++.+.... .....|++. +..+||+++|++++ +++++|++|+
T Consensus 24 ~~~l~~~~~~~~~p~~~~~a~~~~~~~-----------~~~~~y~~~-~~~~lr~~ia~~~~--------~~~~~i~it~ 83 (351)
T PRK14807 24 KYKMDANETPFELPEEVIKNIQEIVKS-----------SQVNIYPDP-TAEKLREELARYCS--------VVPTNIFVGN 83 (351)
T ss_pred eeEccCCCCCCCCCHHHHHHHHHHhhc-----------CcccCCCCc-cHHHHHHHHHHHhC--------CCcccEEEec
Confidence 479999999875 45555555431110 124568765 46999999999975 6789999999
Q ss_pred ChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEe
Q 011570 127 GATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLIT 206 (483)
Q Consensus 127 G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~ 206 (483)
|+++++..++.+++++||+|++++|+|+.+...++.. |.+++.+++++ +|.+|++.+++++.+ .++|+|+++
T Consensus 84 G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~~~~-----~~~k~v~l~ 155 (351)
T PRK14807 84 GSDEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIA-GAVEIPVKLKE--DYTYDVGSFIKVIEK-----YQPKLVFLC 155 (351)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHc-CCeEEEeecCC--CCCCCHHHHHHHhhc-----cCCCEEEEe
Confidence 9999999999999999999999999999988877775 99999999864 478999999998864 278999999
Q ss_pred CCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCce
Q 011570 207 NPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFR 286 (483)
Q Consensus 207 ~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlR 286 (483)
|||||||.+++.+++.++++ +++.++|+||+|.++ + + ....+. .. ..+++|+++||||.||+||+|
T Consensus 156 ~p~NPtG~~~~~~~l~~l~~---~~~~~~ivDe~y~~~-~-~-~~~~~~---~~-----~~~~vi~~~S~SK~~~~~GlR 221 (351)
T PRK14807 156 NPNNPTGSVIEREDIIKIIE---KSRGIVVVDEAYFEF-Y-G-NTIVDV---IN-----EFENLIVLRTLSKAFGLAGLR 221 (351)
T ss_pred CCCCCCCCCCCHHHHHHHHH---hCCCEEEEeCcchhh-c-c-cchHHH---hh-----hCCCEEEEecchHhcccchhc
Confidence 99999999999888777765 456789999999875 3 3 222222 22 347899999999999999999
Q ss_pred EEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEE
Q 011570 287 VGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLF 365 (483)
Q Consensus 287 iG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f 365 (483)
+||+++ ++.+.+.+......+.+++++|.++..++.+. + +++..+.+.++++.+.+.|.+. |+.+.++ +|+|
T Consensus 222 iG~~v~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~----~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~-~~~~ 294 (351)
T PRK14807 222 VGYAVA-NENILKYLNLVKSPYNINSLSQVIALKVLRTG-V----LKERVNYILNERERLIKELSKIPGIKVYPS-KTNF 294 (351)
T ss_pred eeeeec-CHHHHHHHHHccCCCCcCHHHHHHHHHHHhHH-H----HHHHHHHHHHHHHHHHHHHHhCCCcEECcC-CccE
Confidence 999999 56676766666555668899999999999753 3 3444556778888899999876 8877655 4679
Q ss_pred EeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 366 LWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
+|++++. ...+++.++ ++||.|+++..+. ..++++||+++ +.++.+.+++.|++++
T Consensus 295 ~~i~~~~---------~~~~~~~l~-~~gV~v~~~~~~~-~~~~~iRis~~--~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 295 ILVKFKD---------ADYVYQGLL-ERGILVRDFSKVE-GLEGALRITVS--SCEANDYLINGLKELL 350 (351)
T ss_pred EEEEcCC---------HHHHHHHHH-HCCEEEEECCCCC-CCCCeEEEEcC--CHHHHHHHHHHHHHhh
Confidence 9999873 225566666 5699999865322 24679999998 6777888888887653
No 97
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2e-42 Score=343.40 Aligned_cols=317 Identities=17% Similarity=0.254 Sum_probs=244.0
Q ss_pred CCCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcE
Q 011570 44 NPNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRI 122 (483)
Q Consensus 44 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i 122 (483)
.+.++|+|+.|+|+++ ++.+.+.+.+.... .....|+++ |.++||+++|+|+++. + +++++|
T Consensus 17 ~~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~-----------~~~~~Y~~~-~~~~Lr~aia~~~~~~-~----~~~~~i 79 (335)
T PRK14808 17 EKRDRTYLALNENPFPFPEDLVDEVFRRLNS-----------DTLRIYYDS-PDEELIEKILSYLDTD-F----LSKNNV 79 (335)
T ss_pred CCCceeEecCCCCCCCCCHHHHHHHHHHhhh-----------hhhhcCCCC-ChHHHHHHHHHHhCCC-C----CCcceE
Confidence 3467899999999997 44455554431110 123457765 7999999999999853 1 589999
Q ss_pred EEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 123 VMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
++|+|+++++..++.++ |.|++++|+|+.|...++.. |++++.+|++++ |.++... + .++++
T Consensus 80 ~it~Ga~~~i~~~~~~~----d~v~v~~P~y~~~~~~~~~~-g~~~~~v~~~~~--~~~~~~~----~-------~~~~~ 141 (335)
T PRK14808 80 SVGNGADEIIYVMMLMF----DRSVFFPPTYSCYRIFAKAV-GAKFLEVPLTKD--LRIPEVN----V-------GEGDV 141 (335)
T ss_pred EEcCCHHHHHHHHHHHh----CcEEECCCCHHHHHHHHHHc-CCeEEEecCCCc--CCCChhH----c-------cCCCE
Confidence 99999999999999888 67999999999999999986 999999998753 4444321 1 14689
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
++++|||||||.+++.+++++|+ +++++||+||+|.++ .+ ..+.+ +.. ..+++++++||||+||+
T Consensus 142 i~i~nP~NPTG~~~s~~~l~~l~----~~~~~ii~DE~Y~~f--~~-~~~~~---~~~-----~~~~vi~~~S~SK~~~l 206 (335)
T PRK14808 142 VFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAYYEF--HG-ESYVD---LLK-----KYENLAVIRTFSKAFSL 206 (335)
T ss_pred EEEeCCCCCCCCCcCHHHHHHHH----hcCCEEEEECchhhh--cC-CchHH---HHH-----hCCCEEEEEechhhccC
Confidence 99999999999999999988886 479999999999984 33 22222 222 34789999999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCc
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNA 362 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~ 362 (483)
+|+|+||++++ +.+.+.+......+.++.++|.++..++.+.++ ..+..+.+.++++.+.+.|++.|+++.+++|
T Consensus 207 ~GlRvG~~v~~-~~~~~~l~~~~~~~~~~~~~q~a~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~g 281 (335)
T PRK14808 207 AAQRIGYVVSS-EKFIDAYNRVRLPFNVSYVSQMFAKVALDHREI----FEERTKFIVEERERMKSALREMGYRITDSRG 281 (335)
T ss_pred cccceEEEEeC-HHHHHHHHHhcCCCCCCHHHHHHHHHHHhCHHH----HHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
Confidence 99999999994 566666666655566889999998888875433 4555667777789999999999998888866
Q ss_pred eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 363 GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 363 g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
.|+|++++.. ...++.+.+. ++||.|+. | .+++||+++ +.++++.+++.|+.+
T Consensus 282 -~f~~~~l~~~-------~~~~~~~~l~-~~Gi~V~~---~----~~~~Risi~--~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 282 -NFVFIFMEKE-------EKERLLEHLR-AKNIAVRS---F----REGVRITIG--KREENDMILKELEVF 334 (335)
T ss_pred -eEEEEeCCCc-------cHHHHHHHHH-HCCeEEEE---C----CCCeEEecC--CHHHHHHHHHHHHhh
Confidence 5889999731 1235666655 56999994 3 257999998 788999999988753
No 98
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=4.4e-42 Score=337.86 Aligned_cols=308 Identities=21% Similarity=0.309 Sum_probs=235.2
Q ss_pred CCCCCCCCcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 40 HPTKNPNGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 40 ~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
+-+.++.++|+|+.|+|+++++.+.+++.+. ......|+. ...||+++|++++
T Consensus 2 ~~~~~~~~~i~l~~~~np~~p~~~~~a~~~~-------------~~~~~~yp~---~~~l~~~ia~~~~----------- 54 (311)
T PRK08354 2 HGGIREEGLIDFSASVNPYPPEWLDEMFERA-------------KEISGRYTY---YEWLEEEFSKLFG----------- 54 (311)
T ss_pred CCCCCccceeEecCCCCCCCCHHHHHHHHHH-------------HHHhhcCCC---hHHHHHHHHHHHC-----------
Confidence 4455677899999999999877666666541 112346764 4779999998875
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
++|++|+|+++++.+++..+ .+||.|++++|+|+.|...++.. |++++.++ +|++.+++.+. +
T Consensus 55 ~~I~vt~G~~~al~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~~~--------~d~~~l~~~~~-------~ 117 (311)
T PRK08354 55 EPIVITAGITEALYLIGILA-LRDRKVIIPRHTYGEYERVARFF-AARIIKGP--------NDPEKLEELVE-------R 117 (311)
T ss_pred CCEEECCCHHHHHHHHHHhh-CCCCeEEEeCCCcHHHHHHHHHc-CCEEeecC--------CCHHHHHHhhc-------C
Confidence 47999999999999888554 48999999999999999999886 99997754 57888877764 4
Q ss_pred eeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccc
Q 011570 200 IKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKD 279 (483)
Q Consensus 200 ~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~ 279 (483)
+++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.++. .. . .++++++++||||+
T Consensus 118 ~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~-~~------~-------~~~~vi~~~S~SK~ 183 (311)
T PRK08354 118 NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKP-ES------P-------EGENIIKLRTFTKS 183 (311)
T ss_pred CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccc-cc------c-------CCCcEEEEeccHhh
Confidence 5789999999999999999999999999999999999999999876653 21 1 23789999999999
Q ss_pred cCCCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeec
Q 011570 280 MGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLK 359 (483)
Q Consensus 280 ~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~ 359 (483)
||+||+|+||+++ +.+.++.....+.++.+.+.++..++.+ .+ +++.+.++.+.++++.+.+.+ ..+
T Consensus 184 ~~l~GlRiG~~v~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~l~~~l------~~~ 250 (311)
T PRK08354 184 YGLPGIRVGYVKG----FEEAFRSVRMPWSIGSTGYAFLEFLIED-DF--EHLRKTMPLIWREKERFEKAL------YVK 250 (311)
T ss_pred cCCccceeeeeee----hHHHHHHcCCCccCCHHHHHHHHHHHHh-HH--HHHHHHHHHHHHHHHHHHHhc------CCC
Confidence 9999999999998 3445555556666788888888777764 22 234455555666666655544 235
Q ss_pred CCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 360 SNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 360 ~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
+++++| |++++. ..++++.+. ++||.|+||+.|+ .++|+||+++ .+++.+.++++|+++
T Consensus 251 ~~~~~~-~~~~~~---------~~~~~~~l~-~~gv~v~~g~~f~--~~~~iRi~~~--~~~~~~~l~~al~~~ 309 (311)
T PRK08354 251 SDANFF-IKDVGD---------AEKFVEFLK-RNGILVRDCTSFG--LPGYIRFSVR--DREENEKLIRALREW 309 (311)
T ss_pred CCCcEE-EEECCC---------HHHHHHHHH-HCCeEEEecccCC--CCCeEEEEeC--CHHHHHHHHHHHHHh
Confidence 666644 466642 236777665 5699999999996 3589999998 566677777777653
No 99
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=1.7e-42 Score=347.18 Aligned_cols=335 Identities=20% Similarity=0.311 Sum_probs=261.3
Q ss_pred CCCCCCCCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCc
Q 011570 39 YHPTKNPNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITF 117 (483)
Q Consensus 39 ~~~~~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~ 117 (483)
|.+..++.++|+|+.++++++ ++.+.+++.+.. .....|++ .|..++|+++|++++ +
T Consensus 15 ~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~y~~-~g~~~lr~~ia~~~~--------~ 72 (352)
T PRK03321 15 YVPGKTVPGAIKLSSNETPFGPLPSVRAAIARAA-------------AGVNRYPD-MGAVELRAALAEHLG--------V 72 (352)
T ss_pred CCCCCCcccceeccCCCCCCCCCHHHHHHHHHHH-------------HhcCcCCC-CcHHHHHHHHHHHhC--------c
Confidence 555555567899999999884 556666655411 12356864 689999999999986 5
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
++++|++|+|+++++..++.++++|||.|+++.|+|..|...++.. |.+++.++++++ +.+|++.+++++.+
T Consensus 73 ~~~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~-g~~~~~v~~~~~--~~~~~~~l~~~~~~----- 144 (352)
T PRK03321 73 PPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPILVQVA-GATPVQVPLTPD--HTHDLDAMAAAITD----- 144 (352)
T ss_pred CHHHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHHc-CCEEEEccCCCC--CCCCHHHHHHhhcc-----
Confidence 7899999999999999999999999999999999999887777775 999999998743 57899999988853
Q ss_pred CceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCc
Q 011570 198 IRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLS 277 (483)
Q Consensus 198 ~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~S 277 (483)
++++|+++|||||||.+++.+++.++++.+ +++++||+||+|.++.+.+ ....++..+ . ..+++++++|||
T Consensus 145 -~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~-~~~~~~~~~-~-----~~~~vi~~~S~S 215 (352)
T PRK03321 145 -RTRLIFVCNPNNPTGTVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDD-DVPDGLELV-R-----DHPNVVVLRTFS 215 (352)
T ss_pred -CCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCc-CCCcHHHHH-h-----hCCCEEEEecch
Confidence 789999999999999999999999888876 4799999999999887654 322333322 2 347899999999
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcee
Q 011570 278 KDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGC 357 (483)
Q Consensus 278 K~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~ 357 (483)
|.||++|+|+||+++ ++.+.+.+.+....+.+++++|.++.+++...+. +.+ ..+.+.++++.+.+.|.+.|+.+
T Consensus 216 K~~g~~GlRiG~~v~-~~~~~~~~~~~~~~~~~s~~~q~~a~~~l~~~~~---~~~-~~~~~~~~r~~~~~~L~~~~~~~ 290 (352)
T PRK03321 216 KAYGLAGLRVGYAVG-HPEVIAALRKVAVPFSVNSLAQAAAIASLAAEDE---LLE-RVDAVVAERDRVRAALRAAGWTV 290 (352)
T ss_pred HHhhhHHHhhhhhcC-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHHH---HHH-HHHHHHHHHHHHHHHHHHCCCcc
Confidence 999999999999999 4666666666555566899999988888865433 223 33344455678889998888876
Q ss_pred ecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 358 LKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 358 ~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
.++ +|+|+|++++.. ..++.+.|. ++||.|++ |+ +.++||+++ +.+++++++++|++++.
T Consensus 291 ~~~-~g~~i~i~l~~~--------~~~~~~~l~-~~gI~v~~---~~---~~~iRi~~~--~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 291 PPS-QANFVWLPLGER--------TADFAAAAA-EAGVVVRP---FA---GEGVRVTIG--APEENDAFLRAARAWRA 350 (352)
T ss_pred CCC-CCCEEEEeCCCC--------HHHHHHHHH-HCCEEEEc---cC---CCcEEEeeC--CHHHHHHHHHHHHHHhc
Confidence 554 568999998531 236777764 67999987 43 346999997 88999999999988653
No 100
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=4.3e-42 Score=340.65 Aligned_cols=309 Identities=17% Similarity=0.241 Sum_probs=237.8
Q ss_pred CCcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEe
Q 011570 46 NGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMS 125 (483)
Q Consensus 46 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it 125 (483)
.++|+|+.|+|+++++.. . +.. .....||+. ..+||++||++++ +++|++|
T Consensus 20 ~~~i~l~~ne~p~~~~~~-~-~~~---------------~~~~~yp~~--~~~Lr~~ia~~~~----------~~~I~it 70 (330)
T PRK05664 20 ADWLDLSTGIAPWPWPVP-A-IPA---------------DAWARLPET--DDGLEAAARAYYG----------APQLLPV 70 (330)
T ss_pred HHheeecCCcCCCCCCCc-c-cCH---------------HHHHhCCCC--hHHHHHHHHHHhC----------CCCEEEC
Confidence 467999999999764321 0 000 113458754 4899999999975 4799999
Q ss_pred CChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 011570 126 GGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLI 205 (483)
Q Consensus 126 ~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l 205 (483)
+|++++|.+++ .+.+||+|++++|+|+.|...++.. |++++.++++ .+++++. +++++++
T Consensus 71 ~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~~~~~~~-g~~~~~v~~~----------~~~~~~~-------~~~~v~l 130 (330)
T PRK05664 71 AGSQAAIQALP--RLRAPGRVGVLSPCYAEHAHAWRRA-GHQVRELDEA----------EVEAALD-------SLDVLVV 130 (330)
T ss_pred cCHHHHHHHHH--HccCCCEEEEcCCChHHHHHHHHHc-CCeEEEechh----------hHhhhhc-------CCCEEEE
Confidence 99999999885 3579999999999999999999986 9999998753 3444442 5678999
Q ss_pred eCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCc
Q 011570 206 TNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGF 285 (483)
Q Consensus 206 ~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~Gl 285 (483)
+|||||||.+++.+++++|+++|++++++||+||+|.++ .. . .++..+. ..+++++++||||+||+||+
T Consensus 131 ~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~--~~-~--~s~~~~~------~~~~vi~~~SfSK~~gl~Gl 199 (330)
T PRK05664 131 VNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDN--TP-Q--HSLAACA------HRPGLIVLRSFGKFFGLAGA 199 (330)
T ss_pred eCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccC--CC-c--ccccccc------cCCCEEEEeeccccccCCCc
Confidence 999999999999999999999999999999999999763 22 1 2444442 24789999999999999999
Q ss_pred eEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEE
Q 011570 286 RVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLF 365 (483)
Q Consensus 286 RiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f 365 (483)
|+||+++ ++.+.+.+......+.+++++|.++..+|.+..+ .++.++.++++++++.+.|.+.|++.. +..++|
T Consensus 200 RiG~~v~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~-~~~~~f 273 (330)
T PRK05664 200 RLGFVLA-EPALLRALAELLGPWTVSGPTRWLAQAALADTPW----QRRQRERLLAASQRLAALLRRHGLTPA-GGCALF 273 (330)
T ss_pred ceEEEEe-CHHHHHHHHHhcCCCCCCHHHHHHHHHHHhChHH----HHHHHHHHHHHHHHHHHHHHHCCCccc-CCcceE
Confidence 9999999 4566666666555556889999999999987554 456678889999999999998886532 222389
Q ss_pred EeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 366 LWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
+|++++. ..++++.|. ++||.|++ |+ .++++||+++. ++++++++++.|+.+.++
T Consensus 274 ~~~~~~~---------~~~~~~~l~-~~gi~v~~---f~--~~~~iRis~~~-~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 274 QWVRTED---------AAALHEFLA-RRGILTRL---FE--QPASLRFGLPA-DEADWARLDQALLAYRKE 328 (330)
T ss_pred EEEecCC---------HHHHHHHHH-HCCeEEEE---CC--CCCeEEEECCC-CHHHHHHHHHHHHHHHhh
Confidence 9998752 225666655 66999984 43 35799999984 667788888888765443
No 101
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=4.1e-42 Score=345.71 Aligned_cols=326 Identities=19% Similarity=0.340 Sum_probs=255.1
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
+.++|+|+.|+|+++ ++.+.+.+.+. ......|+++.+ ++||+++|++++ +++++|+
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~-------------~~~~~~y~~~~~-~~lr~~ia~~~~--------~~~~~i~ 90 (361)
T PRK00950 33 PESIIKLGSNENPLGPSPKAVEAIEKE-------------LSKIHRYPEPDA-PELREALSKYTG--------VPVENII 90 (361)
T ss_pred ccceEEccCCCCCCCCCHHHHHHHHHH-------------HHhhcCCCCCCH-HHHHHHHHHHhC--------CCHHHEE
Confidence 457899999999876 34444444331 112356877654 999999999986 5789999
Q ss_pred E-eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 124 M-SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 124 i-t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
+ |+|+++++..++.+++++||.|+++.|+|+.+...++.. |++++.++.+ .+|.+|++.+++.+.+ ++++
T Consensus 91 ~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~-g~~~~~~~~~--~~~~~~~~~l~~~~~~------~~~~ 161 (361)
T PRK00950 91 VGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAH-GAKPVYAKRE--EDFSLDVDSVLNAITE------KTKV 161 (361)
T ss_pred EeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHc-CCEEEEeecC--CCCCcCHHHHHHHhcc------CCCE
Confidence 9 799999999999999999999999999999988877775 9999999854 3578999999988753 6889
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
|++++||||||.+++.+++.+++ +++|+++|+||+|.++. + ....+ +.. ..+++++++||||.||+
T Consensus 162 v~~~~p~nptG~~~~~~~l~~l~---~~~~~~li~De~y~~~~--~-~~~~~---~~~-----~~~~vi~~~S~SK~~g~ 227 (361)
T PRK00950 162 IFLCTPNNPTGNLIPEEDIRKIL---ESTDALVFVDEAYVEFA--E-YDYTP---LAL-----EYDNLIIGRTFSKVFGL 227 (361)
T ss_pred EEEeCCCCCCCCCcCHHHHHHHH---HHCCcEEEEECchhhhC--c-cchHH---HHH-----hcCCEEEEEeehHhhcC
Confidence 99999999999999977666654 57799999999998753 3 22222 222 34789999999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCc
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNA 362 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~ 362 (483)
+|+|+||+++ ++.+.+.+......+.+++++|.++..++.+.++ +++.++.++++++.+.+.|. +.+. +.+
T Consensus 228 ~GlRiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~----~~~~~~~~~~~r~~l~~~l~---~~~~-~~~ 298 (361)
T PRK00950 228 AGLRIGYGFV-PEWLIDYYMRAKTPFSLTRLSQAAAIAALSDKEY----IEKSIEHGIKSREYLYNELP---FKVY-PSE 298 (361)
T ss_pred chhhcchhcC-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHhhcC---eeEC-CCc
Confidence 9999999999 5556666655555556888999998888887554 45566677888888888775 5554 456
Q ss_pred eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 363 GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 363 g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
++|+|++++. .+ ..++++.|.+ +||.|+||..|+..+++++||+++ +.+++++++++|++++
T Consensus 299 ~~~i~~~~~~-~~------~~~~~~~l~~-~gv~v~~~~~f~~~~~~~lRis~~--~~~~~~~l~~~L~~il 360 (361)
T PRK00950 299 ANFVLVDVTP-MT------AKEFCEELLK-RGVIVRDCTSFRGLGDYYIRVSIG--TFEENERFLEILKEIV 360 (361)
T ss_pred ceEEEEECCC-CC------HHHHHHHHHH-CCEEEeeCCccCCCCCCeEEEECC--CHHHHHHHHHHHHHHh
Confidence 7899999942 11 3377888775 599999999886555679999998 7789999999998875
No 102
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.3e-42 Score=339.56 Aligned_cols=316 Identities=18% Similarity=0.290 Sum_probs=242.3
Q ss_pred Ccccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEe
Q 011570 47 GVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMS 125 (483)
Q Consensus 47 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it 125 (483)
++|+|+.|+|+++ ++.+.+.+.+.... .....|++ .|.++||+++|+|++ +++++|++|
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~-~g~~~lr~~ia~~~~--------~~~~~I~~t 78 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKR-----------VPFNRYPH-ITSDPLREAIAEFYG--------LDAENIAVG 78 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhc-----------CccccCCC-CCHHHHHHHHHHHhC--------cCcceEEEc
Confidence 5699999999875 34444444321100 12457875 689999999999986 688999999
Q ss_pred CChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 011570 126 GGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLI 205 (483)
Q Consensus 126 ~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l 205 (483)
+|+++++..++.++ +||+|+++.|+|+.|...++.. |.+++++++++ +|.+|++.+++.+ .+++++++
T Consensus 79 ~G~~~~l~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~~-------~~~~~v~~ 146 (337)
T PRK03967 79 NGSDELISYLVKLF--EGKHIVITPPTFGMYSFYAKLN-GIPVIDVPLKE--DFTIDGERIAEKA-------KNASAVFI 146 (337)
T ss_pred CCHHHHHHHHHHHh--CCCeEEEeCCChHHHHHHHHHc-CCeEEEeecCC--CCCcCHHHHHHhc-------cCCCEEEE
Confidence 99999999998876 7999999999999888877765 99999999864 4789999998754 26789999
Q ss_pred eCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCc
Q 011570 206 TNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGF 285 (483)
Q Consensus 206 ~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~Gl 285 (483)
+|||||||.+++.+++.+++ +++++||+||+|.++ .. ..+.+ ... ..+++|+++||||.||++|+
T Consensus 147 ~~P~NPtG~~~~~~~l~~i~----~~~~~ii~De~y~~~--~~-~~~~~---~~~-----~~~~vi~l~S~SK~~~l~Gl 211 (337)
T PRK03967 147 CSPNNPTGNLQPEEEILKVL----ETGKPVVLDEAYAEF--SG-KSLIG---LID-----EYPNLILLRTFSKAFGLAGI 211 (337)
T ss_pred eCCCCCCCCCCCHHHHHHHH----hcCCEEEEECchhhh--cc-cchHH---HHh-----hCCCEEEEecchHhhcchhh
Confidence 99999999999987777665 369999999999884 33 22222 222 24689999999999999999
Q ss_pred eEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEE
Q 011570 286 RVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLF 365 (483)
Q Consensus 286 RiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f 365 (483)
|+||+++ ++.+.+.+......+.++.++|.++..++.+.++ ..+.++.+.++++.+.+.|.+. ..+.+++|
T Consensus 212 RiG~iv~-~~~~i~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~----~~~~~~~~ 282 (337)
T PRK03967 212 RAGYAIA-NEEIIDALYRIKPPFSLNILTMKIVRLALDHYDL----IEERIDYIIKERERVRRELGEY----AYPSDANF 282 (337)
T ss_pred hheeeec-CHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCHHH----HHHHHHHHHHHHHHHHHHhccC----cCCCCCcE
Confidence 9999999 5666666666655667889999999999986544 3344445566778888888764 23577899
Q ss_pred EeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 366 LWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
+|++++ +.+.|+ ++||.|+++.. ..++++||+++ +.++.++++++|+++.+..
T Consensus 283 ~~~~~~-------------~~~~l~-~~gi~v~~~~~---~~~~~~Ri~~~--~~~~~~~l~~~l~~~~~~~ 335 (337)
T PRK03967 283 LLLKLD-------------AYDYLL-ENGIVVRKLSG---RLEGHIRVTVG--KREENDEFIKALKEIKEGY 335 (337)
T ss_pred EEEhHH-------------HHHHHH-HCCEEEEeCCC---CCCCeEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence 998763 345555 46999998653 23569999998 6777888888888776654
No 103
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-41 Score=322.98 Aligned_cols=348 Identities=19% Similarity=0.227 Sum_probs=271.3
Q ss_pred cccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhc
Q 011570 85 KGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRT 164 (483)
Q Consensus 85 ~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~ 164 (483)
....+|++..|.++|+.-|.++.+..... ......+|++|+|.+.+++.+++.++++||.|+++.++|+.....++..
T Consensus 91 s~alQYg~s~G~peLl~fik~h~~~~ih~-p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~- 168 (472)
T KOG0634|consen 91 SRALQYGQSSGIPELLLFIKDHNRPTIHA-PPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEAL- 168 (472)
T ss_pred hhhhccccccCcHHHHHHHHHhccccccC-CCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhcccc-
Confidence 34579999999999999999966522221 2345569999999999999999999999999999999999999988886
Q ss_pred CcEEEEeecCCCCCcccCHHHHHHHHHHHHhc---CCceeEEEEeCC--CCCCcCCCCHHHHHHHHHHHhhcCcEEEEcc
Q 011570 165 GVQLVPVVCDSSNDFKVTMEALEAAYEKAQES---NIRIKGVLITNP--SNPLGTFLDRETLKDIVSFINEKNIHLVCDE 239 (483)
Q Consensus 165 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~---~~~~~~i~l~~P--~NPtG~~~~~~~l~~i~~~a~~~~~~iI~De 239 (483)
|+++++|+++++| +++|.|++.+..+... .+++ .|++|-| +||||..++.+++++|.++|++|+++||+||
T Consensus 169 gv~~ipv~md~~G---i~pE~l~~il~~w~~~~~k~~~p-~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDd 244 (472)
T KOG0634|consen 169 GVKIIPVKMDQDG---IDPESLEEILSNWKPGSYKKPKP-HVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDD 244 (472)
T ss_pred CceEEeccccCCC---CCHHHHHHHHhcCCcccccCCCC-eEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecC
Confidence 9999999998776 9999999999887654 2344 4777877 8999999999999999999999999999999
Q ss_pred ccccCccCC-------CCCcchHHHhhh----h-ccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc
Q 011570 240 IYAATVFTK-------ESSFVSIAEIID----Q-DIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF 307 (483)
Q Consensus 240 ay~~~~~~~-------~~~~~s~~~l~~----~-~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~ 307 (483)
+|..+.|.. +.+..+...+.. . ++.....+||.+.||||.++ ||+|+||+.+++..+...+.....-
T Consensus 245 pYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~~~~~l~ril~~ae~~ 323 (472)
T KOG0634|consen 245 PYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITGNSLFLKRILDLAEVA 323 (472)
T ss_pred ccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeecCHHHHHHHhhhccee
Confidence 998777662 011112111111 0 01113579999999999997 9999999999665665555443221
Q ss_pred -CCCChHHHHHHHHhcCChhH--HHHHHHHHHHHHHHHHHHHHHhhhcC---C-ceeecCCceEEEeeecCc--hhhccC
Q 011570 308 -GLVSSQTQHLIATMLSDDQF--VEKFIAESAKRIAERHKAFTWGLSQV---G-IGCLKSNAGLFLWMDLHH--LLKEQT 378 (483)
Q Consensus 308 -~~~s~~~q~~~~~~l~~~~~--~~~~~~~~~~~l~~~~~~l~~~L~~~---g-i~~~~~~~g~f~~~~l~~--~~~~~~ 378 (483)
...|..+|.++-++|...+. ..+|+.+.+..|..|++.+..+|.+. + .++.+|.+|+|+|++++- ....+.
T Consensus 324 t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~ 403 (472)
T KOG0634|consen 324 TSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKS 403 (472)
T ss_pred ecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccc
Confidence 23677888888888765321 14789999999999999999999886 5 688999999999999971 111122
Q ss_pred hHHHHHHHHHHHHhcCeEeeCCCCCCCC-CC----CEEEEEeccCCHHHHHHHHHHHHHHHHHhhh
Q 011570 379 YEAEMALWRVIINEVKLNVSPGSSFHCP-NP----GWFRVCFANMDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 379 ~~~~~~~~~~Ll~~~gV~v~pg~~f~~~-~~----~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
+.+..++....+.+.||.+.+|++|... +. -++|++++..+.|+++++++|+..++++...
T Consensus 404 i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~f~ 469 (472)
T KOG0634|consen 404 INQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEHFI 469 (472)
T ss_pred hHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHHhh
Confidence 2323455555666789999999999876 22 2899999988999999999999999988753
No 104
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=1.2e-41 Score=340.25 Aligned_cols=327 Identities=22% Similarity=0.375 Sum_probs=262.5
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
++++|+|++++|+++ ++.+.+++.+.. .....|+++.+ +++|+++|++++ +++++|+
T Consensus 18 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~y~~~~~-~~lr~~ia~~~~--------~~~~~i~ 75 (346)
T TIGR01141 18 GKEVIKLNSNENPFGPPPKAKEALRAEA-------------DKLHRYPDPDP-AELKQALADYYG--------VDPEQIL 75 (346)
T ss_pred CCceEEccCCCCCCCCCHHHHHHHHHhH-------------HHhhcCCCCCH-HHHHHHHHHHhC--------cChHHEE
Confidence 357899999999886 444555554421 12357887766 999999999987 5789999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.+++++||+|++++|+|+.+...++.. |.+++.++++++ +.+|++.+++++. +++++|
T Consensus 76 ~~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~-g~~~~~~~~~~~--~~~d~~~l~~~~~------~~~~~v 146 (346)
T TIGR01141 76 LGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYEISAKIH-GAEVVKVPLDED--GQLDLEDILVAID------DKPKLV 146 (346)
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHHc-CCeEEEeccCCC--CCCCHHHHHHhcC------CCCCEE
Confidence 9999999999999999999999999999999888777775 999999998753 6789999998764 378999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++||||||.+++.+++.++++.++ +++++|+||+|.++.+.. .+.+.. . ..+++++++|+||.||++
T Consensus 147 ~l~~p~NptG~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~--~~~~~~---~-----~~~~~i~~~S~sK~~g~~ 215 (346)
T TIGR01141 147 FLCSPNNPTGNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEP--STLPLL---A-----EYPNLIVLRTLSKAFGLA 215 (346)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCc--cHHHHH---h-----hCCCEEEEehhhHhhhch
Confidence 99999999999999999999999887 799999999998753321 212221 1 235789999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCc
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNA 362 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~ 362 (483)
|+|+||+++ ++.+.+.+......+.+++++|.++..++.... +.++.+++++++++.+.+.|.++ |+++.+ .+
T Consensus 216 G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~ 289 (346)
T TIGR01141 216 GLRIGYAIA-NAEIIDALNKVRAPFNLSRLAQAAAIAALRDDD----FIEKTVEEINAERERLYDGLKKLPGLEVYP-SD 289 (346)
T ss_pred hhhceeeec-CHHHHHHHHhccCCCCCCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHHhcCCCEECC-Cc
Confidence 999999999 566666666555556678999999989988754 35677788899999999999887 888654 45
Q ss_pred eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHH
Q 011570 363 GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRIT 431 (483)
Q Consensus 363 g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~ 431 (483)
|+|+|++++. + ..++++.|. ++||.+.||..|+.. ++++|++++ ++++++++++.|+
T Consensus 290 g~~~~~~~~~--~------~~~~~~~L~-~~gI~v~~g~~f~~~-~~~iRls~~--~~~~i~~~~~~l~ 346 (346)
T TIGR01141 290 ANFVLIRFPR--D------ADALFEALL-EKGIIVRDLNSYPGL-PNCLRITVG--TREENDRFLAALR 346 (346)
T ss_pred CCEEEEecCC--C------HHHHHHHHH-HCCeEEEeCCCcCCC-CCeEEEecC--CHHHHHHHHHHhC
Confidence 6899999874 1 236777776 469999999988644 789999997 7889999988763
No 105
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=1.8e-41 Score=336.33 Aligned_cols=313 Identities=21% Similarity=0.300 Sum_probs=250.2
Q ss_pred CCCcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 45 PNGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
..++++|+.++|+++++..+.. .....+|+++.+ ++||+.+|++++ +++++|++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~y~~~~~-~~lr~~la~~~~--------~~~~~i~~ 69 (330)
T TIGR01140 16 PEDWLDFSTGINPLGPPVPPIP-----------------ASAWARYPDPEY-DELRAAAAAYYG--------LPAASVLP 69 (330)
T ss_pred hhheeEccccCCCCCCChhhcc-----------------hHHHhhCCCccH-HHHHHHHHHHhC--------CChhhEEE
Confidence 3467999999998876521110 124567988776 999999999986 57899999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..+..+ +.+| .|++++|+|..+...++.. |.+++.++ |++.+++.+. ++++|+
T Consensus 70 t~G~~~~i~~~~~~-l~~g-~vl~~~p~y~~~~~~~~~~-g~~~~~~~---------d~~~l~~~~~-------~~~~v~ 130 (330)
T TIGR01140 70 VNGAQEAIYLLPRL-LAPG-RVLVLAPTYSEYARAWRAA-GHEVVELP---------DLDRLPAALE-------ELDVLV 130 (330)
T ss_pred CCCHHHHHHHHHHH-hCCC-eEEEeCCCcHHHHHHHHHc-CCEEEEeC---------CHHHHHhhcc-------cCCEEE
Confidence 99999999998766 5677 6999999999999988876 99998887 6788888763 567899
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
+++||||||.+++.+++++|+++|+++|++||+||+|.++.+. .++..+.. ..+++|+++||||.||++|
T Consensus 131 i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~~-----~~~~~i~~~S~SK~~g~~G 200 (330)
T TIGR01140 131 LCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD-----ASLAPQAA-----RFPGLVVLRSLTKFFGLAG 200 (330)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc-----cchhhHhc-----cCCCEEEEEecchhhcCch
Confidence 9999999999999999999999999999999999999875432 13333322 3478999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-ceeecCCce
Q 011570 285 FRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVG-IGCLKSNAG 363 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~~~~~~g 363 (483)
+|+||++++ +.+.+.+......+.+++++|.++..++.+.++ .++.+++++++++.+.+.|++++ +++. +.+|
T Consensus 201 ~R~G~i~~~-~~~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~ 274 (330)
T TIGR01140 201 LRLGFVVAH-PALLARLREALGPWTVNGPARAAGRAALADTAW----QAATRARLAAERARLAALLARLGGLEVV-GGTA 274 (330)
T ss_pred hhhhheeCC-HHHHHHHHhcCCCCCchHHHHHHHHHHHhchHH----HHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCC
Confidence 999999994 556666666655566889999999999987665 45567888999999999999987 5554 4567
Q ss_pred EEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHH
Q 011570 364 LFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRI 430 (483)
Q Consensus 364 ~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L 430 (483)
+|+|++++. ..+++++|++ +||.+.||..|.....+++||+++. +.++ +.++++|
T Consensus 275 ~f~~~~~~~---------~~~l~~~l~~-~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~-~~~~~~l 329 (330)
T TIGR01140 275 LFLLVRTPD---------AAALHEALAR-RGILIRDFDNFPGLDPRYLRFALPT-DEEN-DRLEEAL 329 (330)
T ss_pred eEEEEEcCC---------HHHHHHHHHH-CCEEEEECCCCCCCCCCEEEEEecC-HHHH-HHHHHhh
Confidence 999998873 2377888876 5999999999964456799999983 3333 7777665
No 106
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-36 Score=286.35 Aligned_cols=345 Identities=22% Similarity=0.376 Sum_probs=273.1
Q ss_pred ccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-CCCCeEEEeCCCCcChHHHHhhhc
Q 011570 86 GIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-DPGDAFLVPTPYYPGFDRDLRWRT 164 (483)
Q Consensus 86 ~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~~~~~~~~~~~ 164 (483)
.+..|+...|.+-+|+.+|+|+.++.| ++.+|++|++|.|++.++..++..++ ++.+-|++|.|.|+.|...+..+
T Consensus 105 s~GaYS~SqGv~~vR~~VA~~I~rRDG--~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~- 181 (475)
T KOG0258|consen 105 SLGAYSDSQGVPGVRKHVAEFIERRDG--IPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLL- 181 (475)
T ss_pred cccccccccCChhHHHHHHHHHHhccC--CCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHh-
Confidence 456899999999999999999999988 78899999999999999999998876 56789999999999999999987
Q ss_pred CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC
Q 011570 165 GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT 244 (483)
Q Consensus 165 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~ 244 (483)
|...+++.++++.+|.+|.++|++.+.++. ++.+++++++.||.||||.+++++.+++|+.+|.+++++++.||+|.+.
T Consensus 182 ~~~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~N 260 (475)
T KOG0258|consen 182 GGTQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDN 260 (475)
T ss_pred CCcccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhh
Confidence 999999999999999999999999999887 6789999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcchHHHhhhhccccCCCe--EEEEecCccc-cCCCCceEEEEEec--ChHHHHHHHHhhhc-CCCChHHHHHH
Q 011570 245 VFTKESSFVSIAEIIDQDIACNRNL--IHIVYSLSKD-MGFPGFRVGIIYSY--NDQVVSCARKMSSF-GLVSSQTQHLI 318 (483)
Q Consensus 245 ~~~~~~~~~s~~~l~~~~~~~~~~~--vi~~~S~SK~-~g~~GlRiG~li~~--~~~l~~~~~~~~~~-~~~s~~~q~~~ 318 (483)
+|..+.+|.|+.....+|+....++ ++.++|.||. +|-.|.|-||+-.- +..+.+.+.++.+. ...+...|..+
T Consensus 261 vy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~v 340 (475)
T KOG0258|consen 261 VYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLV 340 (475)
T ss_pred ccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhh
Confidence 9988668999988777775333334 4567899999 56689999998652 33444444443332 22333445555
Q ss_pred HHhcCC-----hhH--HHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecCchhhc------cChHHHHH
Q 011570 319 ATMLSD-----DQF--VEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLHHLLKE------QTYEAEMA 384 (483)
Q Consensus 319 ~~~l~~-----~~~--~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~~~~~~------~~~~~~~~ 384 (483)
-.++.. ..+ ...........++++...+.+.++.+ |+.+.+++|.||++.++.-..+. ....-+.-
T Consensus 341 dl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~F 420 (475)
T KOG0258|consen 341 DLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEF 420 (475)
T ss_pred ceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHHHHHHHHHhCCCCcHH
Confidence 445443 111 12223445677788888899999998 99999999999998776422111 11111345
Q ss_pred HHHHHHHhcCeEeeCCCCCCCCC-CCEEEEEeccCCHHHHHHHHHHHHHHHHHhh
Q 011570 385 LWRVIINEVKLNVSPGSSFHCPN-PGWFRVCFANMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 385 ~~~~Ll~~~gV~v~pg~~f~~~~-~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
.|.+||+..||.+.||+.|+... .-++|.+|- +.. + +.+++++++-.+..
T Consensus 421 Yc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiL--p~~-~-~~i~~~~~fH~~f~ 471 (475)
T KOG0258|consen 421 YCLKLLEATGICVVPGSGFGQKEGTYHFRTTIL--PPG-L-EIIEKFKKFHAEFM 471 (475)
T ss_pred HHHHHHHhcCeEEecCCCCCCCCceeEEEEeec--Cch-h-HHHHHHHHHHHHHH
Confidence 78899999999999999998542 236999996 333 5 88888888776654
No 107
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.7e-36 Score=265.76 Aligned_cols=305 Identities=19% Similarity=0.301 Sum_probs=242.2
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCC-CeEEEeCCCCcChHHHHhhhcCcEE
Q 011570 90 FQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPG-DAFLVPTPYYPGFDRDLRWRTGVQL 168 (483)
Q Consensus 90 Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~g-d~Vlv~~P~y~~~~~~~~~~~G~~~ 168 (483)
|+++. ...++.++++- -++++|+|+++-|+.+.|..+++..+.|| ++|+...|+|+.|...+... ++++
T Consensus 66 ~~d~r-nk~ls~a~~~d--------kpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iN-d~eV 135 (375)
T KOG0633|consen 66 YPDPR-NKRLSDALAQD--------KPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAIN-DAEV 135 (375)
T ss_pred cCCcc-cchhhhhcccC--------CCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecC-CceE
Confidence 45443 35555555543 35799999999999999999999999999 99999999999998777764 9999
Q ss_pred EEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCC
Q 011570 169 VPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTK 248 (483)
Q Consensus 169 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~ 248 (483)
+.+|++. +|.+|.+++.+.+.. ...+|.+++|+|+||||..+..+++.+|++... |.+|++||+|.+ |.+
T Consensus 136 vkvpl~p--dF~lnvdai~evl~~----ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYid--Fsg 205 (375)
T KOG0633|consen 136 VKVPLNP--DFSLNVDAIAEVLEL----DSKIKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYID--FSG 205 (375)
T ss_pred EEecCCC--CccccHHHHHHHHhc----cccceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEe--ecc
Confidence 9999986 799999999988764 357899999999999999999999999998654 789999999988 554
Q ss_pred CCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHH
Q 011570 249 ESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFV 328 (483)
Q Consensus 249 ~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~ 328 (483)
. .|...+.. .++|++++.+|||.||++|+|+||... +..+++.+..+..++++|.++..++.+++++..
T Consensus 206 -~--~S~~~lV~-----kYpNLivlqTlSKsfGLAGiRvG~~~~-~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n-- 274 (375)
T KOG0633|consen 206 -V--ESRMKLVK-----KYPNLIVLQTLSKSFGLAGIRVGYGAF-PLSIAEILNRAKAPYNISVAGSVAALAALSDSN-- 274 (375)
T ss_pred -c--cccchHhH-----hCCceeehhhhhhhcCcceeEeecccc-cHHHHHHHHhccCCccccchhHHHHHHhcCccc--
Confidence 2 35555666 689999999999999999999999998 677888888888777788888888888888543
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcC-Cce-eecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeC-CCCCCC
Q 011570 329 EKFIAESAKRIAERHKAFTWGLSQV-GIG-CLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSP-GSSFHC 405 (483)
Q Consensus 329 ~~~~~~~~~~l~~~~~~l~~~L~~~-gi~-~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~p-g~~f~~ 405 (483)
-+.++..++.+.+.|.++.+.|.+. ++. +..+...+|+.+++....+. .+..+..+++.++||.|+- |+.-
T Consensus 275 ~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n~----~akkly~q~at~~gVvVRfrgse~-- 348 (375)
T KOG0633|consen 275 GKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDNG----MAKKLYKQDATKMGVVVRFRGSEE-- 348 (375)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCcH----HHHHHHHHHHHhcceEEEEcCCcc--
Confidence 2346677788888889999999987 333 22333346899998754221 2336677778889999983 1111
Q ss_pred CCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 406 PNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 406 ~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
...|++||+++ ++|+...+++-|+++
T Consensus 349 ~c~G~lRitvG--t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 349 GCKGYLRITVG--TPEENTVLMKCLKQF 374 (375)
T ss_pred ccceeEEEEcC--CcccchHHHHHHHhh
Confidence 13579999999 778888888888875
No 108
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=1e-33 Score=282.87 Aligned_cols=318 Identities=30% Similarity=0.544 Sum_probs=253.2
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCc
Q 011570 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGV 166 (483)
Q Consensus 87 ~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~ 166 (483)
...|++..|..++++.++++++..++ .+..++++++++|+++++..++.++.++||+|+++.|+|..+...++.. |.
T Consensus 29 ~~~~~~~~~~~~l~~~l~~~l~~~~~--~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~-~~ 105 (350)
T cd00609 29 LLGYYPDPGLPELREAIAEWLGRRGG--VDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAARLA-GA 105 (350)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCcceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHC-CC
Confidence 35678888999999999999997665 3456789999999999999999999999999999999999999999886 99
Q ss_pred EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCcc
Q 011570 167 QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVF 246 (483)
Q Consensus 167 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~ 246 (483)
+++.++.++.+.+..+.+.++..+ ++++++|++++|+||||.+++.+++.+|+++|+++|+++|+|++|+.+.+
T Consensus 106 ~~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~ 179 (350)
T cd00609 106 EVVPVPLDEEGGFLLDLELLEAAK------TPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVY 179 (350)
T ss_pred EEEEEecccccCCccCHHHHHhhc------CccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhcee
Confidence 999999876554433324444433 24789999999999999999999999999999999999999999988765
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCC
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSD 324 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~ 324 (483)
.. ... +...... ..+.+++++|+||.++++|+|+||++++++.+.+.+.....+ +..+...+.++..++..
T Consensus 180 ~~-~~~-~~~~~~~-----~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 252 (350)
T cd00609 180 DG-EPP-PALALLD-----AYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDD 252 (350)
T ss_pred CC-ccc-ccccCcC-----ccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhC
Confidence 54 221 1111111 346789999999999989999999999654666666555444 45777888888888876
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcee-ecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCC
Q 011570 325 DQFVEKFIAESAKRIAERHKAFTWGLSQVGIGC-LKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSF 403 (483)
Q Consensus 325 ~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~-~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f 403 (483)
.. +..++.++.+.++++++.+.|.+.+... ..+.+|+++|++++... ..+...+++.++||.+.++..|
T Consensus 253 ~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~l~~~gi~i~~~~~~ 322 (350)
T cd00609 253 GE---EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGD-------DEEFLERLLLEAGVVVRPGSAF 322 (350)
T ss_pred cH---HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCCC-------hHHHHHHHHHhCCEEEeccccc
Confidence 52 4467778888999999999999886543 56778899999987531 1245666777889999999887
Q ss_pred CCCCCCEEEEEeccCCHHHHHHHHHHHH
Q 011570 404 HCPNPGWFRVCFANMDDRTMEIALSRIT 431 (483)
Q Consensus 404 ~~~~~~~iRis~~~~~~e~l~~~l~~L~ 431 (483)
....+.++|++++.. .++++.++++|+
T Consensus 323 ~~~~~~~iRi~~~~~-~~~i~~~~~al~ 349 (350)
T cd00609 323 GEGGEGFVRLSFATP-EEELEEALERLA 349 (350)
T ss_pred ccCCCCeEEEEeeCC-HHHHHHHHHHhh
Confidence 654567999999865 999999999885
No 109
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=2e-33 Score=287.89 Aligned_cols=319 Identities=16% Similarity=0.228 Sum_probs=237.9
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcE
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQ 167 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~ 167 (483)
..|++..|.++||++++++++ .+++++|+|+++++.+++.++++||| |++++|.|..|...+... |++
T Consensus 72 ~~Y~~~~g~~~Lreaia~~~~----------~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~-G~~ 139 (460)
T PRK13238 72 EAYAGSRSYYRLEDAVKDIFG----------YPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELN-GAT 139 (460)
T ss_pred cccCCCCCHHHHHHHHHHHhC----------CCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHc-CCE
Confidence 579999999999999999986 35799999999999999999999999 999999999998888875 999
Q ss_pred EEEeecCCC------CCcc--cCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCc-CCCCHHHHHHHHHHHhhcCcEEEEc
Q 011570 168 LVPVVCDSS------NDFK--VTMEALEAAYEKAQESNIRIKGVLITNPSNPLG-TFLDRETLKDIVSFINEKNIHLVCD 238 (483)
Q Consensus 168 ~~~v~~~~~------~~~~--~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG-~~~~~~~l~~i~~~a~~~~~~iI~D 238 (483)
++.+++++. ++|. +|++.|++.+.+... .++++|++++|||||| .+++.+++++|.++|++||++||+|
T Consensus 140 ~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~--~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~D 217 (460)
T PRK13238 140 AVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA--ENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVID 217 (460)
T ss_pred EEEEeccccccccccccccCCcCHHHHHHHHhhcCC--CceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 999998642 3565 999999999974211 2689999999999998 9999999999999999999999999
Q ss_pred cccc--cCccCCC----CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceE------EEEEecChHHHHHHHHhh-
Q 011570 239 EIYA--ATVFTKE----SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRV------GIIYSYNDQVVSCARKMS- 305 (483)
Q Consensus 239 eay~--~~~~~~~----~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRi------G~li~~~~~l~~~~~~~~- 305 (483)
+++. ..+|... ....++.++. +.++|++|.+.++|+|+ |+++++++.+.+.++...
T Consensus 218 aa~~~e~a~f~~~~e~g~~~~si~~i~-----------~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~~~~~ 286 (460)
T PRK13238 218 AARFAENAYFIKQREPGYKDKSIKEIA-----------REMFSYADGLTMSAKKDAMVNIGGLLCFRDEDLFTECRTLCI 286 (460)
T ss_pred CcchhhhhhhhhhccccccCCCHHHHh-----------hhhcccCcEEEEecccCCCCcceeEEEcChHHHHHHhhhccc
Confidence 9663 2334210 1223443332 22456666666666664 355654456666665542
Q ss_pred ------hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhh---c
Q 011570 306 ------SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLK---E 376 (483)
Q Consensus 306 ------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~---~ 376 (483)
.++..+...|.+++..+.+.- -+.++..+ .+++++|.+.|.+.|+++..|.||+|+++++..... .
T Consensus 287 ~~~g~~t~~g~~~~~~~Ala~~l~e~~-~~~~~~~~----~~~~~~l~~~L~~~G~~~~~p~Gg~~v~~d~~~~~~~~~~ 361 (460)
T PRK13238 287 LYEGFPTYGGLAGRDMEALAVGLYEGM-DEDYLAYR----IGQVEYLGEGLEEAGVPIQTPAGGHAVFVDAGKFLPHIPA 361 (460)
T ss_pred ccCCcccccCcHHHHHHHHHhhHHHhh-ChHHHHHH----HHHHHHHHHHHHHCCCCeEccCCceEEEEEchhcCCCCCC
Confidence 122234455777776554310 01223332 335689999999999999999999999999975421 1
Q ss_pred cChHHHHHHHHHHHHhcCeEeeCCCCCCCCC-----------CCEEEEEecc--CCHHHHHHHHHHHHHHHHHh
Q 011570 377 QTYEAEMALWRVIINEVKLNVSPGSSFHCPN-----------PGWFRVCFAN--MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 377 ~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~-----------~~~iRis~~~--~~~e~l~~~l~~L~~~l~~~ 437 (483)
..+. ..+|+.+|+++.||.+.|+..|..+. ...+||++.. .+.++++.+.++|+++.++.
T Consensus 362 ~~~~-~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~~ 434 (460)
T PRK13238 362 EQFP-AQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKENR 434 (460)
T ss_pred CCCc-hHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHhH
Confidence 1111 35899999999999999988776432 3679999974 29999999999999866443
No 110
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-32 Score=250.32 Aligned_cols=324 Identities=19% Similarity=0.286 Sum_probs=242.4
Q ss_pred cccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC---CCC--eEEEe-CCCCcChHH
Q 011570 85 KGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD---PGD--AFLVP-TPYYPGFDR 158 (483)
Q Consensus 85 ~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~---~gd--~Vlv~-~P~y~~~~~ 158 (483)
..+.+|..++|...|.+++++++++.+| +.+++.||.+|+|++.+.+-++..|.. .|+ .|+.| .|.|-+|.+
T Consensus 65 e~~cnY~~pQG~~~li~ala~~l~~~yg--wnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d 142 (417)
T COG3977 65 EALCNYDGPQGKAVLIDALAKMLRREYG--WNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYAD 142 (417)
T ss_pred HHHhcCCCCcchhHHHHHHHHHHHHHhC--CCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccc
Confidence 3567999999999999999999999999 557999999999999999999988853 243 46555 799988876
Q ss_pred HHhhhcCcEEEEee----cCCCC--CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcC
Q 011570 159 DLRWRTGVQLVPVV----CDSSN--DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKN 232 (483)
Q Consensus 159 ~~~~~~G~~~~~v~----~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~ 232 (483)
+.-. +--+|.+. +.+++ .|.+|.++|.-. .++.+|+++-|.||||.|++.+|+.+|-++|++||
T Consensus 143 ~~l~--~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~--------e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~g 212 (417)
T COG3977 143 AGLE--EDLFVSAKPNIELLPAGQFKYHVDFEHLHIG--------ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHG 212 (417)
T ss_pred cccC--ccceeeccCCcccccccceeeccCHHHcccc--------cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcC
Confidence 5321 11122211 22233 356787777542 37889999999999999999999999999999999
Q ss_pred cEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc--CCC
Q 011570 233 IHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF--GLV 310 (483)
Q Consensus 233 ~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~--~~~ 310 (483)
+.+|+|.+|+.- |.+ --|..+.-+. .+|+|.+.|+||. |+||.|+|.+++ ++.++..+..+... ...
T Consensus 213 iPliIDnAYg~P-FP~-iifsd~~~~w-------~~NiilC~SLSK~-GLPG~R~GIiIa-ne~viqaitnmn~iisLap 281 (417)
T COG3977 213 IPLIIDNAYGVP-FPG-IIFSDATPLW-------NENIILCMSLSKL-GLPGSRCGIIIA-NEKVIQAITNMNGIISLAP 281 (417)
T ss_pred CcEEEecccCCC-CCc-eecccccccC-------CCCEEEEeehhhc-CCCCcceeEEEc-cHHHHHHHHhccceeeecC
Confidence 999999999743 443 2222222232 3789999999995 899999999999 67777777665443 235
Q ss_pred ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc----CCceeecCCceEEEeeecCchhhccChHHHHHHH
Q 011570 311 SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ----VGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALW 386 (483)
Q Consensus 311 s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~ 386 (483)
+.+.+++++.+++.++.++-.-+..+--|+.+.+.....|++ ..+.++.|+|..|+|+-+.+..- .+.+++
T Consensus 282 ~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPI-----tt~~LY 356 (417)
T COG3977 282 GRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPI-----TTEELY 356 (417)
T ss_pred CCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCC-----CHHHHH
Confidence 667889999999988764332233445556665555555544 46788899999999997765321 244778
Q ss_pred HHHHHhcCeEeeCCCCCCCCC-------CCEEEEEeccCCHHHHHHHHHHHHHHHHHhh
Q 011570 387 RVIINEVKLNVSPGSSFHCPN-------PGWFRVCFANMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 387 ~~Ll~~~gV~v~pg~~f~~~~-------~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
++|.+ .||++.||+.|.+.- ..++|+++. .+++.++.++++|++.+++.-
T Consensus 357 q~LKa-~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~-~~~~~ie~Gva~lae~ve~~y 413 (417)
T COG3977 357 QRLKA-RGVLMVPGHYFFPGLDKEWPHTHQCMRMNYV-PEPEKIEKGVAILAEEVERAY 413 (417)
T ss_pred HHHHh-CeEEEecccccCCCCCCCCCCccceEEEecC-CCHHHHHHHHHHHHHHHHHHH
Confidence 87765 599999999987642 247999997 488999999999999988764
No 111
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=3.9e-31 Score=262.36 Aligned_cols=282 Identities=12% Similarity=0.133 Sum_probs=206.4
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEe---CCCCcChHHHHhhhcCcEEEEee
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVP---TPYYPGFDRDLRWRTGVQLVPVV 172 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~---~P~y~~~~~~~~~~~G~~~~~v~ 172 (483)
+.+|++.+|+|++ ++++++++++|+++++..++.++++|||.|+++ .|+|..|...++.. |++++.+
T Consensus 56 ~~~Le~~lA~~~g--------~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~~~~~l~-ga~~~~~- 125 (346)
T TIGR03576 56 EEKVQELGREHLG--------GPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLA-GAEYFES- 125 (346)
T ss_pred HHHHHHHHHHHcC--------CCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHc-CCEEecc-
Confidence 4566666666655 578999999999999999999999999999975 57999998888875 8876432
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
.+++.++. ..++++|+++ ++||+|.+++.+++++|+++|+++|++||+||+|+.++... ...
T Consensus 126 --------~~l~~l~~--------~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~-~~~ 187 (346)
T TIGR03576 126 --------DELSELKK--------IDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRL-YGQ 187 (346)
T ss_pred --------CCHHHHhh--------CcCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCcccccccc-CCC
Confidence 13444321 1256777774 57999999999999999999999999999999998754321 111
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcC--CCChHHHHHHHHhcCChhHHHH
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFG--LVSSQTQHLIATMLSDDQFVEK 330 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~ 330 (483)
.+.... ...+++.|||| +++|+|+||++++ +.+++.+.+....+ .+++++|.++.++|+...
T Consensus 188 ~~~~~~---------~~divv~s~SK--alaG~r~G~v~~~-~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~---- 251 (346)
T TIGR03576 188 PPALDL---------GADLVVTSTDK--LMDGPRGGLLAGR-KELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFE---- 251 (346)
T ss_pred CCHHHc---------CCcEEEeccch--hccccceEEEEeC-HHHHHHHHHhhcCcccCccHHHHHHHHHHHhhcc----
Confidence 122222 12356779999 5699999999994 56666666554332 257888888888886422
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCE
Q 011570 331 FIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGW 410 (483)
Q Consensus 331 ~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~ 410 (483)
.+..++.++++++++.+.+.. +.+.++.+| |+|++++.. +..+++..+++++||.|+||+.|. ..++|
T Consensus 252 -~~~~~~~l~~r~~~~~~~l~~--~~~~~~~~~-f~~~~~~~~-------~~~~~~~~ll~~~gV~v~~~~~f~-~~~~~ 319 (346)
T TIGR03576 252 -LSRIRDAFKRKEEVYLRLFDK--LNVERTPTG-FVIKGVEEE-------KLIEIGLDLLRNYGIITITAVGMP-GASKT 319 (346)
T ss_pred -HHHHHHHHHHHHHHHHHHHHh--CCCCcCCCe-EEEEeCCCC-------CHHHHHHHHHHhCCEEEeCCcccC-CCCCe
Confidence 245567788888888888873 555565665 899998741 123677788889999999998884 34679
Q ss_pred EEEEeccCCHH---HHHHHHHHHHHHH
Q 011570 411 FRVCFANMDDR---TMEIALSRITSFM 434 (483)
Q Consensus 411 iRis~~~~~~e---~l~~~l~~L~~~l 434 (483)
+||+++. +++ +++.++++|++-+
T Consensus 320 vRis~~~-~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 320 LRFDLAA-KDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred EEEEEec-ChHHhcCHHHHHHHHHhcc
Confidence 9999983 333 6888888887643
No 112
>PRK10534 L-threonine aldolase; Provisional
Probab=100.00 E-value=3.9e-31 Score=263.00 Aligned_cols=324 Identities=15% Similarity=0.191 Sum_probs=222.1
Q ss_pred cccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCC
Q 011570 48 VIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGG 127 (483)
Q Consensus 48 ~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G 127 (483)
+|||+.|+|+.+++.+.+++.... .....|++..+..+|+++||++++ + +.+++++|
T Consensus 1 ~~~~~~~~~~~p~~~~~~a~~~~~-------------~~~~~Y~~~~~~~~L~~~la~~~g--------~--~~~~v~~~ 57 (333)
T PRK10534 1 MIDLRSDTVTRPSRAMLEAMMAAP-------------VGDDVYGDDPTVNALQDYAAELSG--------K--EAALFLPT 57 (333)
T ss_pred CcccccccCCCCCHHHHHHHHhcc-------------CCCcccCCCHHHHHHHHHHHHHhC--------C--CeEEEeCc
Confidence 489999999998777777665421 123568655678999999999976 2 34467788
Q ss_pred hhHHHHHHHHHhcCCCCeEEEeCCCCcC-hHHH-HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 011570 128 ATGAHETVAFCLADPGDAFLVPTPYYPG-FDRD-LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLI 205 (483)
Q Consensus 128 ~~~al~~~~~~l~~~gd~Vlv~~P~y~~-~~~~-~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l 205 (483)
+++++.+++.+++.+||+|+++.|+|.. |... .....+++++.++.++ +|.+|+++|++++.+...+..++++|++
T Consensus 58 g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~lv~l 135 (333)
T PRK10534 58 GTQANLVALLSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAA--DGTLPLDKVAAKIKPDDIHFARTRLLSL 135 (333)
T ss_pred hHHHHHHHHHHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCCC--CCCCCHHHHHHhhcccCcCcccceEEEE
Confidence 8888888888889999999999988853 3221 2333236777777653 6889999999988531111115789999
Q ss_pred eCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCc
Q 011570 206 TNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGF 285 (483)
Q Consensus 206 ~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~Gl 285 (483)
|||+ ||.+++.+++++|+++|++++++||+||+|....... .. .+...+.. ..++++ .||||.||++
T Consensus 136 ~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~-~~-~~~~~~~~-----~~~~~~--~s~SK~~~~~-- 202 (333)
T PRK10534 136 ENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVA-YG-CELKEITQ-----YCDSFT--ICLSKGLGTP-- 202 (333)
T ss_pred ecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHH-cC-CCHHHHHh-----cCCEEE--EEeEcCCCCc--
Confidence 9876 4999999999999999999999999999986211100 01 12222221 124444 3899998864
Q ss_pred eEE-EEEecChHHHHHHHHhhhcCC----CChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecC
Q 011570 286 RVG-IIYSYNDQVVSCARKMSSFGL----VSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKS 360 (483)
Q Consensus 286 RiG-~li~~~~~l~~~~~~~~~~~~----~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~ 360 (483)
+| |+++ ++++.+.+++....+. .+.++|.++...+.+ .. +..+...+.++++.+.|+++|+++.+|
T Consensus 203 -~G~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~------~~-~~~~~~~~~r~~l~~~L~~~g~~~~~~ 273 (333)
T PRK10534 203 -VGSLLVG-NRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKH------NV-ARLQEDHDNAAWLAEQLREAGADVMRQ 273 (333)
T ss_pred -ccceEEc-CHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHh------hH-HHHHHHHHHHHHHHHHHHhCCCccCCC
Confidence 68 6777 6667777666554322 223445554444432 11 222233456689999999999998877
Q ss_pred CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHH
Q 011570 361 NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFML 435 (483)
Q Consensus 361 ~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~ 435 (483)
+ ++|+|++++.. ...++. ++++++||.|+||. ++|++... .+++++++++++|++++.
T Consensus 274 ~-~nfv~~~~~~~-------~~~~~~-~~l~~~gi~v~~~~--------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 274 D-TNMLFVRVGEE-------QAAALG-EYMRERNVLINASP--------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred C-ceEEEEECCch-------hHHHHH-HHHHHcCeeecCCc--------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 5 67999998731 122454 45556799999873 48887743 599999999999997764
No 113
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.97 E-value=2.2e-29 Score=254.45 Aligned_cols=321 Identities=17% Similarity=0.258 Sum_probs=232.9
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcE
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQ 167 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~ 167 (483)
..|++..|.++|+++++++++ .+++++|+|+++++.+++.++++|||.| +++|+|..+...+... |++
T Consensus 47 ~~Y~~~~g~~~Leeaia~~~g----------~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~-Ga~ 114 (431)
T cd00617 47 EAYAGSKSFYDLEDAVQDLFG----------FKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHIEAN-GAV 114 (431)
T ss_pred CccCCCCCHHHHHHHHHHHHC----------CCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhC-CCE
Confidence 359999999999999999986 3589999999999999999999999987 6899999998888875 999
Q ss_pred EEEeecCCCCC------cc--cCHHHHHHHHHHHHhcCCceeEEEEeCCCCCC-cCCCCHHHHHHHHHHHhhcCcEEEEc
Q 011570 168 LVPVVCDSSND------FK--VTMEALEAAYEKAQESNIRIKGVLITNPSNPL-GTFLDRETLKDIVSFINEKNIHLVCD 238 (483)
Q Consensus 168 ~~~v~~~~~~~------~~--~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPt-G~~~~~~~l~~i~~~a~~~~~~iI~D 238 (483)
++.++++++.+ |. +|++.|+++|.+.. ..++++|++++||||+ |.+++.+++++|.++|++||++||+|
T Consensus 115 pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~--~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~D 192 (431)
T cd00617 115 PVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVG--AENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLD 192 (431)
T ss_pred eEEEecccccccccccCCCCCcCHHHHHHHhCccc--CCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 99999875432 44 99999999997410 1247899999999998 99999999999999999999999999
Q ss_pred ccccc--CccC----CCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCce------EEEEEecChHHHHHHHHhh-
Q 011570 239 EIYAA--TVFT----KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFR------VGIIYSYNDQVVSCARKMS- 305 (483)
Q Consensus 239 eay~~--~~~~----~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlR------iG~li~~~~~l~~~~~~~~- 305 (483)
++... ..|. +.....++.++ ++.+.|+||.+.+.|+| .||++++++++.+.++...
T Consensus 193 aAr~~~na~~i~~r~~g~~~~si~ei-----------~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~~~~ 261 (431)
T cd00617 193 AARFAENAYFIKEREEGYRDKSIAEI-----------AREMFSYADGCTMSAKKDGLVNIGGFLALRDDELYEEARQRVV 261 (431)
T ss_pred chhhHhhhhhhhcccccccCCCHHHH-----------HHHhhccCCEEEEEeecCCCCccceEEEeCcHHHHHHHHHhcc
Confidence 99532 1221 00122344433 23356778887777777 5699997666776665322
Q ss_pred ---h---cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhh---c
Q 011570 306 ---S---FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLK---E 376 (483)
Q Consensus 306 ---~---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~---~ 376 (483)
. ++..+.-...+++..|.+... .++++ +++ ++++++.+.|.+.|+++..|.||+++|++++.... .
T Consensus 262 ~~~~~~~~gG~~~r~~~A~A~gL~e~~~-~~~l~---~~~-~~r~~l~~~L~~~G~~v~~P~Ggh~v~~d~~~~~~~~~~ 336 (431)
T cd00617 262 LYEGFVTYGGMAGRDMEALAQGLREAVE-EDYLR---HRV-EQVRYLGDRLDEAGVPIVEPAGGHAVFIDAREFLPHIPQ 336 (431)
T ss_pred ccCCccccccccHHHHHHHHHHHHhccc-HHHHH---HHH-HHHHHHHHHHHHCCCCccCCCcceEEEEEhHHhcCCCCc
Confidence 1 122232222333334433110 12222 223 35588999999999999999999999999986432 1
Q ss_pred cChHHHHHHHHHHHHhcCeEee-CCCCC-C--CC-------CCCEEEEEecc--CCHHHHHHHHHHHHHHHHHhhh
Q 011570 377 QTYEAEMALWRVIINEVKLNVS-PGSSF-H--CP-------NPGWFRVCFAN--MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 377 ~~~~~~~~~~~~Ll~~~gV~v~-pg~~f-~--~~-------~~~~iRis~~~--~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
..+ ...+|+.+|+++.||.+. -|+.. + +. .-..+||++.. .+.++++.+.++|..++++...
T Consensus 337 ~~~-~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~~~ 411 (431)
T cd00617 337 EQF-PAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYERRED 411 (431)
T ss_pred ccC-cHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhhHhh
Confidence 111 345889999999999854 35521 1 11 12469999965 3999999999999998877543
No 114
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.97 E-value=3.8e-29 Score=254.73 Aligned_cols=307 Identities=16% Similarity=0.132 Sum_probs=216.5
Q ss_pred CCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEe
Q 011570 92 DYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPV 171 (483)
Q Consensus 92 ~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v 171 (483)
...|.+++++++++++.+.+| .+++|++|+| ++++..++.++++|||.|++++|+|+.+...+... |.+++.+
T Consensus 81 ~~~G~~~l~~~l~~~la~~~g-----~~~~i~~tsG-~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~-~~~~~~~ 153 (397)
T PRK06939 81 FICGTQDLHKELEEKLAKFLG-----TEDAILYSSC-FDANGGLFETLLGKEDAIISDALNHASIIDGVRLC-KAKRYRY 153 (397)
T ss_pred cccCCcHHHHHHHHHHHHHhC-----CCcEEEEcCh-HHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhc-CCceEEe
Confidence 346888999999999998776 2478888888 67888889999999999999999999998888775 8888877
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+. .|++.+++.+++....+.++++|+..+.+||||.+.+ +++|+++|+++|++||+||+|....+.. ..
T Consensus 154 ~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~---~~~l~~la~~~~~~li~De~~~~g~~~~-~~ 222 (397)
T PRK06939 154 AN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP---LPEICDLADKYDALVMVDDSHAVGFVGE-NG 222 (397)
T ss_pred CC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC---HHHHHHHHHHhCCEEEEECcccccCcCC-CC
Confidence 63 4788898888754333346777776677899998766 8889999999999999999996322222 11
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh-hc--CC-CChHHHHHHHHhcCChhH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS-SF--GL-VSSQTQHLIATMLSDDQF 327 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~-~~--~~-~s~~~q~~~~~~l~~~~~ 327 (483)
.+...... + ..+.+++++||||+++ |+|+||++++ +.+.+.+.... .+ .. .++..+.++.+.++.
T Consensus 223 -~~~~~~~~-~---~~~~~i~~~S~sK~~~--g~r~G~v~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~--- 291 (397)
T PRK06939 223 -RGTVEHFG-V---MDRVDIITGTLGKALG--GASGGYTAGR-KEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLEL--- 291 (397)
T ss_pred -CCHHHHcC-C---CCCCcEEEEECHHHhC--ccCceEEEeC-HHHHHHHHHhCccccccCCCCHHHHHHHHHHHHH---
Confidence 11111111 0 2245788999999984 5699999995 55555554432 22 11 223333333333321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC--
Q 011570 328 VEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC-- 405 (483)
Q Consensus 328 ~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~-- 405 (483)
+. ...+.+++++++++++.+.|++.|+++.++.++++ ++.++... ...++++.|+++ ||.+.++. |..
T Consensus 292 ~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~L~~~-gI~v~~~~-~~~~~ 361 (397)
T PRK06939 292 LE-ESDELRDRLWENARYFREGMTAAGFTLGPGEHPII-PVMLGDAK------LAQEFADRLLEE-GVYVIGFS-FPVVP 361 (397)
T ss_pred Hh-cCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCCCEE-EEEECCHH------HHHHHHHHHHHC-CceEeeeC-CCCCC
Confidence 11 12456678889999999999988887776666654 44454321 234788888876 99998654 432
Q ss_pred CCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 406 PNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 406 ~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
.+.+++|++++. .+++++++++++|++++++.
T Consensus 362 ~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 362 KGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred CCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 234689999976 69999999999999988654
No 115
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.97 E-value=4.8e-29 Score=251.18 Aligned_cols=300 Identities=16% Similarity=0.202 Sum_probs=210.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS 175 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~ 175 (483)
+.++++.+|++++ .+.+++++|+++++..++.+++++||.|+++.+.|......++.. |++++.++.++
T Consensus 53 ~~~~~e~lA~~~g----------~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~-g~~~~~~~~~~ 121 (370)
T TIGR02539 53 IHDFLEDLAEFLG----------MDEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERA-GLNVKEVPHTG 121 (370)
T ss_pred HHHHHHHHHHHhC----------CCceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHc-CCEEEEEecCC
Confidence 4678888999876 246777999999999999999999999999988866666666665 99999999876
Q ss_pred CCCcccCHHHHHHHHHHHHhc-CCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcch
Q 011570 176 SNDFKVTMEALEAAYEKAQES-NIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVS 254 (483)
Q Consensus 176 ~~~~~~d~~~l~~~i~~~~~~-~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s 254 (483)
+.+|.+|++.|++++.+...+ ..++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|...... .+
T Consensus 122 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~~-----~~ 193 (370)
T TIGR02539 122 HPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRMP-----VS 193 (370)
T ss_pred cccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCcC-----CC
Confidence 557889999999998653221 136789999999999999888 777888899999999999999853111 12
Q ss_pred HHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCChH----------HHHHHHHhcCC
Q 011570 255 IAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQ----------TQHLIATMLSD 324 (483)
Q Consensus 255 ~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~----------~q~~~~~~l~~ 324 (483)
.... +..++++|+||+++ +|.|+||++++ +.+++.+.....++..+.+ ++.++...+..
T Consensus 194 ~~~~---------~~di~v~s~sK~~~-~~g~~G~l~~~-~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 262 (370)
T TIGR02539 194 AKEI---------GADFIVGSGHKSMA-ASGPCGVLGMS-EEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPH 262 (370)
T ss_pred HHHc---------CCCEEEeeCccccc-CCCCEEEEEEC-HHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHH
Confidence 2211 33466799999998 67789999995 5555555444332222211 33333343432
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceee--cCCceEEEeeecCchhh--ccChHHHHHHHHHHHHhcCeE-eeC
Q 011570 325 DQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCL--KSNAGLFLWMDLHHLLK--EQTYEAEMALWRVIINEVKLN-VSP 399 (483)
Q Consensus 325 ~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~--~~~~g~f~~~~l~~~~~--~~~~~~~~~~~~~Ll~~~gV~-v~p 399 (483)
..++++...+.++.. +++.+.|.++|+++. .+..++|++++++.... .........+.+.|. ++||. +++
T Consensus 263 ---~~~~l~~~~~~~~~~-~~l~~~L~~~g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~-e~GI~~ir~ 337 (370)
T TIGR02539 263 ---VVERVKRWDEEVKKT-RWFVAELEDIGFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELK-KRGIHGIRS 337 (370)
T ss_pred ---HHHHHHHHHHHHHHH-HHHHHHHHhCCcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHH-hCCCccccC
Confidence 133344444444444 589999999998763 24556789898863210 000011224566665 55996 654
Q ss_pred CCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 400 GSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 400 g~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
| .++++|+++...+++++++++++|++++++
T Consensus 338 ~------~~~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 338 G------QTKYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred C------cceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 3 246899998335999999999999988764
No 116
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=1e-28 Score=251.36 Aligned_cols=297 Identities=15% Similarity=0.166 Sum_probs=210.8
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCC
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSS 176 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~ 176 (483)
.+|++++|++++ .+++++++|+++++..++.+++++||.|+++.|+|+.+...++.. +.+.+.++
T Consensus 86 ~~le~~ia~~~g----------~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~-~~~~~~~~---- 150 (393)
T TIGR01822 86 KELEAKIAAFLG----------TEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLC-KAKRYRYA---- 150 (393)
T ss_pred HHHHHHHHHHhC----------CCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhc-CCceEEeC----
Confidence 788999999876 256788889999999999999999999999999999998887765 76665443
Q ss_pred CCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHH
Q 011570 177 NDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIA 256 (483)
Q Consensus 177 ~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~ 256 (483)
.+|++++++++++....+.++++|++.+++||||.+.+ +++|+++|++||+++|+||+|....+.. ...+..
T Consensus 151 ---~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~--~~~~~~ 222 (393)
T TIGR01822 151 ---NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGP--TGRGSH 222 (393)
T ss_pred ---CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCC--CCCchH
Confidence 26899999999764333336788888889999999988 8888999999999999999996433322 112222
Q ss_pred HhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh-hhc--C-CCChHHHHHHHHhcCChhHHHHHH
Q 011570 257 EIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM-SSF--G-LVSSQTQHLIATMLSDDQFVEKFI 332 (483)
Q Consensus 257 ~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~-~~~--~-~~s~~~q~~~~~~l~~~~~~~~~~ 332 (483)
.... + ..+.+++++|+||.+ +|+|+||+++ ++.+.+.+... ..+ . ..++..+.++.+++. .++ ..
T Consensus 223 ~~~~-~---~~~~di~~~s~sK~l--~g~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~---~~~-~~ 291 (393)
T TIGR01822 223 ELCG-V---MGRVDIITGTLGKAL--GGASGGFTTA-RKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLE---MLE-AS 291 (393)
T ss_pred HhcC-C---CCCCeEEEEEChHHh--hCCCcEEEEe-CHHHHHHHHHhCccceecCCCCHHHHHHHHHHHH---HHh-cC
Confidence 2211 0 124568899999987 4789999998 45566655442 222 1 123333333334432 111 23
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC--CCCCE
Q 011570 333 AESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC--PNPGW 410 (483)
Q Consensus 333 ~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~--~~~~~ 410 (483)
++.+++++++++++.+.|++.|+++.++.+. ++.+.++... ...+++..|+++ ||.+. +..|.. .+..+
T Consensus 292 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~i~~~~~~------~~~~l~~~L~~~-gI~v~-~~~~~~~~~~~~~ 362 (393)
T TIGR01822 292 NELRDRLWANTRYFRERMEAAGFDIKPADHP-IIPVMLYDAV------LAQRFARRLLEE-GIYVT-GFFYPVVPKGQAR 362 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-EEEEEeCCHH------HHHHHHHHHHHC-CeeEe-eeCCCCCCCCCce
Confidence 5567788899999999998888877655554 5555554321 234788888765 99987 554532 13347
Q ss_pred EEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 411 FRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 411 iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
+|++++. .+++++++++++|++++++
T Consensus 363 iRis~~~~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 363 IRVQISAAHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 9999976 4899999999999988664
No 117
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=6.8e-29 Score=249.42 Aligned_cols=292 Identities=14% Similarity=0.116 Sum_probs=208.2
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS 175 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~ 175 (483)
..+++++++++++ .+++|++++|+.+.+ .++.+++++||+|+++.|+|+.+...++.. |.+++.++.
T Consensus 63 ~~~l~~~la~~~~---------~~~~i~~~~G~~~~~-~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~-g~~~~~~~~-- 129 (360)
T TIGR00858 63 HEELEEELAEWKG---------TEAALLFSSGYLANV-GVISALVGKGDLILSDALNHASLIDGCRLS-GARVRRYRH-- 129 (360)
T ss_pred HHHHHHHHHHHhC---------CCCEEEECchHHHHH-HHHHHhCCCCCEEEEEccccHHHHHHHHhc-CCceEEecC--
Confidence 4567788888765 357888888865555 567788999999999999999998888875 999887763
Q ss_pred CCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchH
Q 011570 176 SNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSI 255 (483)
Q Consensus 176 ~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~ 255 (483)
+|++.+++.+++.. +.++++|++++++||||...+ +++|.++|+++|++||+||+|..+.+.. .. .+.
T Consensus 130 -----~d~~~l~~~~~~~~--~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~-~~-~~~ 197 (360)
T TIGR00858 130 -----NDVEHLERLLEKNR--GERRKLIVTDGVFSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGE-DG-RGT 197 (360)
T ss_pred -----CCHHHHHHHHHHcc--cCCCeEEEEeCCccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCC-CC-Cch
Confidence 57889998886421 124678888899999999888 7888888999999999999998654543 21 222
Q ss_pred HHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh-hhc---CCCChHHHHHHHHhcCChhHHHHH
Q 011570 256 AEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM-SSF---GLVSSQTQHLIATMLSDDQFVEKF 331 (483)
Q Consensus 256 ~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~-~~~---~~~s~~~q~~~~~~l~~~~~~~~~ 331 (483)
..... + ...+++|+++||||+||++| ||+++ ++.+.+.+... ..+ ...++..+.++.++++.. . .
T Consensus 198 ~~~~~-~--~~~~~~i~i~s~sK~~~~~g---G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~-~ 266 (360)
T TIGR00858 198 LEHFG-L--KPEPVDIQVGTLSKALGSYG---AYVAG-SQALIDYLINRARTLIFSTALPPAVAAAALAALELI---Q-E 266 (360)
T ss_pred HHhcC-C--CccCCcEEEEechhhhhccC---cEEEc-CHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH---h-h
Confidence 22211 0 02367899999999999777 99998 45555554332 222 123344444444555321 1 2
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC-CCCCE
Q 011570 332 IAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC-PNPGW 410 (483)
Q Consensus 332 ~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~-~~~~~ 410 (483)
.+..+++++++++++.+.|+++++++.++ +++|+|+.++... ...++.+.|+ ++||.+.++..+.. .+.++
T Consensus 267 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~l~-~~gI~v~~~~~~~~~~~~~~ 338 (360)
T TIGR00858 267 EPWRREKLLALIARLRAGLEALGFTLMPS-CTPIVPVIIGDNA------SALALAEELQ-QQGIFVGAIRPPTVPAGTSR 338 (360)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCccCCC-CCCEEEEEeCCHH------HHHHHHHHHH-HCCeeEeeeCCCCCCCCCce
Confidence 34567788999999999999888877654 4568999886421 2336777776 46999998766543 23468
Q ss_pred EEEEecc-CCHHHHHHHHHHHH
Q 011570 411 FRVCFAN-MDDRTMEIALSRIT 431 (483)
Q Consensus 411 iRis~~~-~~~e~l~~~l~~L~ 431 (483)
+||+++. .+++++++++++|+
T Consensus 339 iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 339 LRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred EEEEEcCCCCHHHHHHHHHhhC
Confidence 9999975 59999999999874
No 118
>PLN02483 serine palmitoyltransferase
Probab=99.97 E-value=2.8e-28 Score=252.51 Aligned_cols=309 Identities=18% Similarity=0.180 Sum_probs=218.0
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcE
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQ 167 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~ 167 (483)
..|+...++.+|++++|++++ .++.|++++|.... ..++.+++++||.|++++|+|..+...++.. |++
T Consensus 140 ~~~g~~~~~~ele~~lA~~~g---------~~~ai~~~~G~~an-~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~-Ga~ 208 (489)
T PLN02483 140 VDGGTTKLHRELEELVARFVG---------KPAAIVFGMGYATN-STIIPALIGKGGLIISDSLNHNSIVNGARGS-GAT 208 (489)
T ss_pred cccCCcHHHHHHHHHHHHHhC---------CCcEEEECCHHHHH-HHHHHHhCCCCCEEEEcchhhHHHHHHHHHc-CCe
Confidence 457777789999999999997 46788888875554 4677889999999999999999999988876 999
Q ss_pred EEEeecCCCCCcccCHHHHHHHHHHHHhc------CCceeEEEEeCC-CCCCcCCCCHHHHHHHHHHHhhcCcEEEEccc
Q 011570 168 LVPVVCDSSNDFKVTMEALEAAYEKAQES------NIRIKGVLITNP-SNPLGTFLDRETLKDIVSFINEKNIHLVCDEI 240 (483)
Q Consensus 168 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~------~~~~~~i~l~~P-~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Dea 240 (483)
++.++.+ |++++++.+++.... .+..++++++++ .|++|.+.+ +++|+++|+++|++||+||+
T Consensus 209 v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa 278 (489)
T PLN02483 209 IRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEA 278 (489)
T ss_pred EEEEeCC-------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECc
Confidence 9998853 467777776643211 112356666666 699999988 88889999999999999999
Q ss_pred cccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh---cC-CCCh-HHH
Q 011570 241 YAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS---FG-LVSS-QTQ 315 (483)
Q Consensus 241 y~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~---~~-~~s~-~~q 315 (483)
|+...++. . ......+..-. ..+.+|+++||||+||++| ||+++ ++.+.+.+..... +. ..++ ..|
T Consensus 279 ~s~g~~G~-~-G~g~~~~~~v~---~~~~dI~~~SfSKs~g~~G---G~i~~-~~~li~~l~~~~~~~~~~~~~~p~~~~ 349 (489)
T PLN02483 279 HSIGAVGK-T-GRGVCELLGVD---PADVDIMMGTFTKSFGSCG---GYIAG-SKELIQYLKRTCPAHLYATSMSPPAVQ 349 (489)
T ss_pred CccCccCC-C-CCchHHhcCCC---cccCcEEEEecchhcccCc---eEEEc-CHHHHHHHHHhCccccccCCcCHHHHH
Confidence 97443332 1 12222222100 1356789999999999887 99998 5666666655422 22 2233 333
Q ss_pred HHHHHhc---C-ChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHH
Q 011570 316 HLIATML---S-DDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIIN 391 (483)
Q Consensus 316 ~~~~~~l---~-~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~ 391 (483)
.+ .+.+ . .+. .++..+++++++++++++.+.|.++|+.+..+.+++.+|+.+....+ ..++++.|++
T Consensus 350 ~~-~aaL~~l~~~~g--~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~~~~sp~~~l~l~~~~~------~~~~~~~Ll~ 420 (489)
T PLN02483 350 QV-ISAIKVILGEDG--TNRGAQKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAK------IPAFSRECLK 420 (489)
T ss_pred HH-HHHHHHHHhCcc--ccchHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCEEEEEECCHHH------HHHHHHHHHH
Confidence 33 3323 1 211 12234556789999999999999999887766666677776643211 2367888885
Q ss_pred hcCeEeeCCCCCC--CCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 392 EVKLNVSPGSSFH--CPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 392 ~~gV~v~pg~~f~--~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
+||.+.+ ..|. +...+++||+++. .++|++++++++|+++++..
T Consensus 421 -~GI~v~~-~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 421 -QNVAVVV-VGFPATPLLLARARICISASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred -CCcEEee-eCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 5999997 4452 2234689999976 69999999999999987654
No 119
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.97 E-value=3.1e-28 Score=247.02 Aligned_cols=340 Identities=14% Similarity=0.148 Sum_probs=233.8
Q ss_pred CCCcccccchhh-hh-cHHHHHHHHhcCCCCcccccccccccc-ccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCc
Q 011570 45 PNGVIQMGLAEN-LL-CHELVEDWLMNNPKASICSAEGLNEFK-GIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDR 121 (483)
Q Consensus 45 ~~~~i~l~~~~n-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~ 121 (483)
.+++|||+.+.. .+ +++.+.+++.+.. .... ....|....|..++++++++++.+..| .++.
T Consensus 32 g~~~id~~~~~~~g~~~~~~~~~a~~~~~----------~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g-----~~~~ 96 (385)
T TIGR01825 32 GKEVINLSSNNYLGFADHPRLKEAAAQAI----------QQYGVGAGAVRTIAGTLRLHEELEEKLAKFKK-----TEAA 96 (385)
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHH----------HHcCCCCCccCcccCCcHHHHHHHHHHHHHhC-----CCcE
Confidence 356789988752 33 3444444443310 0011 123577778999999999999998766 3467
Q ss_pred EEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCcee
Q 011570 122 IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIK 201 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 201 (483)
|++++|+ +++..++.+++++||.|+++.|+|+.+...+... |.+++.++ .+|++++++.+.+.. .++++
T Consensus 97 i~~~sG~-~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~-g~~~~~~~-------~~d~~~l~~~l~~~~--~~~~~ 165 (385)
T TIGR01825 97 LVFQSGF-NTNQGVLSALLRKGDIVLSDELNHASIIDGLRLT-KATKKIYK-------HADMDDLDRVLRENP--SYGKK 165 (385)
T ss_pred EEECcHH-HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhc-CCceEEeC-------CCCHHHHHHHHHhhc--cCCCe
Confidence 8888885 5566788888999999999999999888777764 88876654 368888988886532 13578
Q ss_pred EEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccC
Q 011570 202 GVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG 281 (483)
Q Consensus 202 ~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g 281 (483)
+|++++++||||.+.+ +++|.++|++||+++|+||+|..+.+.. ........+.- ..++++++.||||.+|
T Consensus 166 ~v~~~~v~~~tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~-----~~~~~i~~~s~sK~~~ 236 (385)
T TIGR01825 166 LIVTDGVFSMDGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGE-AGRGTVHHFGL-----EDKVDIQVGTLSKAIG 236 (385)
T ss_pred EEEEecCCcCCCCccC---HHHHHHHHHHhCCEEEEECcccccCcCC-CCCccHhhcCC-----CcCCcEEEEeccHHhh
Confidence 8888888999999998 7888999999999999999997665542 11111111111 2467899999999998
Q ss_pred CCCceEEEEEecChHHHHHHHHhh-hc--C-CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcee
Q 011570 282 FPGFRVGIIYSYNDQVVSCARKMS-SF--G-LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGC 357 (483)
Q Consensus 282 ~~GlRiG~li~~~~~l~~~~~~~~-~~--~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~ 357 (483)
++| ||+++ ++.+.+.+.... .+ + ..+++.+.++.+.+... .+. .+..+++.++++++.+.|.+.|+++
T Consensus 237 ~~g---G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~-~~~~~~~~~~~~~l~~~L~~~g~~~ 308 (385)
T TIGR01825 237 VVG---GYAAG-HKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDEL---QRS-PELMERLWDNTRFFKAGLGKLGYDT 308 (385)
T ss_pred cCC---CEEec-CHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHH---hcC-HHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 776 99988 455555554432 22 2 23445566665555321 111 2344556778899999998889888
Q ss_pred ecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC--CCCCEEEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 358 LKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC--PNPGWFRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 358 ~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~--~~~~~iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
..+.++ ++++.++.. ....+++..|+++ ||.+. +..|+. .+.+++|++++. .+++++++++++|++++
T Consensus 309 ~~~~~~-~~~~~~~~~------~~~~~~~~~L~~~-gi~v~-~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~ 379 (385)
T TIGR01825 309 GGSETP-ITPVVIGDE------KAAQEFSRRLFDE-GIFAQ-SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVG 379 (385)
T ss_pred CCCCCC-EEEEEECCH------HHHHHHHHHHHHC-CcEEc-ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 877765 555555431 1134688888876 99985 444432 234689999854 69999999999999988
Q ss_pred HH
Q 011570 435 LK 436 (483)
Q Consensus 435 ~~ 436 (483)
++
T Consensus 380 ~~ 381 (385)
T TIGR01825 380 KE 381 (385)
T ss_pred HH
Confidence 54
No 120
>PLN02721 threonine aldolase
Probab=99.97 E-value=3.4e-28 Score=243.86 Aligned_cols=334 Identities=15% Similarity=0.182 Sum_probs=219.4
Q ss_pred CCcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEe
Q 011570 46 NGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMS 125 (483)
Q Consensus 46 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it 125 (483)
..+++|+.|+++.+.+.+.+++...... .....|++. ..+|++++|++++. +.++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~-----------~~~~~~~~~--~~~l~~~la~~~~~----------~~~~~~ 61 (353)
T PLN02721 5 SRVVDLRSDTVTKPTDAMRAAMANAEVD-----------DDVLGYDPT--ALRLEEEMAKIFGK----------EAALFV 61 (353)
T ss_pred hhhhhhhcccccCCCHHHHHHHHhccCC-----------CcccCCCHH--HHHHHHHHHHHhCC----------ceeEEe
Confidence 3468999999998877777776542000 112234332 68999999999872 234555
Q ss_pred CChhHHHHHHHHHhcC-CCCeEEEeCCCCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC-Cce
Q 011570 126 GGATGAHETVAFCLAD-PGDAFLVPTPYYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN-IRI 200 (483)
Q Consensus 126 ~G~~~al~~~~~~l~~-~gd~Vlv~~P~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~-~~~ 200 (483)
+++++++..++.++++ +||.|++++|+|..... .+.. .|++++.++.++ ++.+|++.+++++++....+ +++
T Consensus 62 ~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~-~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~~ 138 (353)
T PLN02721 62 PSGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENGGISTL-GGVHPRTVKNNE--DGTMDLDAIEAAIRPKGDDHFPTT 138 (353)
T ss_pred cCccHHHHHHHHHHccCCCCeEEEcCccceehhcccchhhh-cCceeEecCCCc--CCCcCHHHHHHHHHhccCCCCCcc
Confidence 5556566677777777 99999999999865444 3454 499999988754 46789999999997421111 378
Q ss_pred eEEEEeCC-CCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccc
Q 011570 201 KGVLITNP-SNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKD 279 (483)
Q Consensus 201 ~~i~l~~P-~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~ 279 (483)
++|+++++ |||||.+++.+++++|+++|+++|+++|+||+|....+.. .. .+...+.. ..+.+ +.|+||.
T Consensus 139 ~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~-~~-~~~~~~~~-----~~d~~--~~s~sK~ 209 (353)
T PLN02721 139 RLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVA-LG-VPVHRLVK-----AADSV--SVCLSKG 209 (353)
T ss_pred eEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhh-hC-CCHHHHhh-----hCCEE--EEecccc
Confidence 89999875 7899999999999999999999999999999985321110 01 12222222 22433 4479999
Q ss_pred cCCCCceEEE-EEecChHHHHHHHHhhhcC--CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cc
Q 011570 280 MGFPGFRVGI-IYSYNDQVVSCARKMSSFG--LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GI 355 (483)
Q Consensus 280 ~g~~GlRiG~-li~~~~~l~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi 355 (483)
++. ++|| +++ ++++.+.+....... ..+...+.+++.+.. ++.+.++.+ +..++++.+.+.|+++ ++
T Consensus 210 l~~---~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~-~~~~~~~~l~~~L~~~~~~ 280 (353)
T PLN02721 210 LGA---PVGSVIVG-SKSFIRKAKRLRKTLGGGMRQVGVLAAAALVA----LQENVPKLE-DDHKKAKLLAEGLNQIKGL 280 (353)
T ss_pred cCC---ceeeEEec-CHHHHHhHHHHHHhcCCCeehhHHHHHHHHHH----HHHHHHHHH-HHHHHHHHHHHHHHhCCCc
Confidence 863 3676 455 566665554443321 122222222222211 122233332 3355678899999887 67
Q ss_pred ee--ecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHH
Q 011570 356 GC--LKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITS 432 (483)
Q Consensus 356 ~~--~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~ 432 (483)
.+ .++.+ +|+|++++.... .....+++.|. ++||.++|+. ++++|++++. .+++++++++++|++
T Consensus 281 ~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~L~-~~gi~v~~~~------~~~lR~~~~~~~~~~~i~~~~~~l~~ 348 (353)
T PLN02721 281 RVNVAAVET-NIVYFDITDGSR----ITAEKLCKSLE-EHGVLLMPGN------SSRIRVVTHHQISDSDVQYTLSCFQQ 348 (353)
T ss_pred EEecCCccc-eEEEEEccCCcc----ccHHHHHHHHH-hCCcEEecCC------CceEEEEecCcCCHHHHHHHHHHHHH
Confidence 54 34444 579999875210 01336777777 6799999873 4589999974 699999999999998
Q ss_pred HHH
Q 011570 433 FML 435 (483)
Q Consensus 433 ~l~ 435 (483)
++.
T Consensus 349 ~~~ 351 (353)
T PLN02721 349 AAL 351 (353)
T ss_pred Hhh
Confidence 765
No 121
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.97 E-value=3.9e-28 Score=230.66 Aligned_cols=328 Identities=18% Similarity=0.265 Sum_probs=218.7
Q ss_pred cccccC-CCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChh-HHHHHHHH-Hh----cC--------CCCeEEEe
Q 011570 85 KGIAIF-QDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGAT-GAHETVAF-CL----AD--------PGDAFLVP 149 (483)
Q Consensus 85 ~~~~~Y-~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~-~al~~~~~-~l----~~--------~gd~Vlv~ 149 (483)
.+..+| +...|++++|+.+|+.++ +++++|++...++ +.|+-++. ++ .+ +.-+.|||
T Consensus 59 ~D~RNY~G~l~Gipe~r~l~a~llg--------v~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCP 130 (425)
T PF12897_consen 59 TDCRNYPGGLDGIPEARELFAELLG--------VPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCP 130 (425)
T ss_dssp EBTTSS-S-SS--HHHHHHHHHHHT--------S-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEE
T ss_pred ccccCCCCccCChHHHHHHHHHHhC--------CCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEec
Confidence 356789 889999999999999998 7899998876555 55554442 22 11 12378999
Q ss_pred CCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCC--CCCCcCCCCHHHHHHHHHH
Q 011570 150 TPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNP--SNPLGTFLDRETLKDIVSF 227 (483)
Q Consensus 150 ~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P--~NPtG~~~~~~~l~~i~~~ 227 (483)
.|+|..+..+++.. |++.++||+.++| +|++.+++.+.+ ++.+|.|+ |.| +||||.++|.|..++++++
T Consensus 131 vPGYDRHFai~E~~-Giemi~VpM~~dG---PDmD~Ve~LV~~----D~svKGiW-cVP~ySNPtG~tySde~vrrlA~m 201 (425)
T PF12897_consen 131 VPGYDRHFAITEHF-GIEMIPVPMTEDG---PDMDMVEELVAE----DPSVKGIW-CVPKYSNPTGITYSDEVVRRLAAM 201 (425)
T ss_dssp ES--HHHHHHHHHC-T-EEEEEEEETTE---E-HHHHHHHTHT----STTEEEEE-E-SSS-TTT-----HHHHHHHHHS
T ss_pred CCCchHHHHHHHhh-CcEEEecCCCCCC---CCHHHHHHHHhc----CCccceEE-eCCCccCCCCccCCHHHHHHHhcC
Confidence 99999999999886 9999999999877 999999998864 46888875 445 8999999999999999997
Q ss_pred -HhhcCcEEEEccccccCccCCCCCc---chHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH
Q 011570 228 -INEKNIHLVCDEIYAATVFTKESSF---VSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK 303 (483)
Q Consensus 228 -a~~~~~~iI~Deay~~~~~~~~~~~---~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~ 303 (483)
....+..|+-|++|.-..+..+.+. ..+.....+. +++++++++.|+||.. +||-.++++.++.+.+....+.
T Consensus 202 ~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~A--Gnpdrv~~F~STSKIT-f~GaGva~~aaS~~Nl~~~~~~ 278 (425)
T PF12897_consen 202 KTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKA--GNPDRVYVFASTSKIT-FPGAGVAFFAASEANLAWIKKH 278 (425)
T ss_dssp --SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHT--T-TTSEEEEEESTTTS--TTSS-EEEEE-HHHHHHHHHH
T ss_pred CcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHc--CCCCeEEEEecccccc-cCCcceeeeecCHHHHHHHHHH
Confidence 3457999999999987766321221 2455544432 3678999999999986 6999999999976666665544
Q ss_pred hhhc-CCCChHHHHHHHHhcCChh-HHHHHHHHHHHHHHHHHHHHHHhhhcC-----C-ceeecCCceEEEeeecCchhh
Q 011570 304 MSSF-GLVSSQTQHLIATMLSDDQ-FVEKFIAESAKRIAERHKAFTWGLSQV-----G-IGCLKSNAGLFLWMDLHHLLK 375 (483)
Q Consensus 304 ~~~~-~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~l~~~~~~l~~~L~~~-----g-i~~~~~~~g~f~~~~l~~~~~ 375 (483)
+... .+..-+.|..-..++.+.+ -++.|.+++++.++-+.+.+.+.|++. | .+|..|.||||++++...+-.
T Consensus 279 ~~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G~A 358 (425)
T PF12897_consen 279 LSVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDGTA 358 (425)
T ss_dssp HHHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT-H
T ss_pred hcCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCChH
Confidence 4332 3356788999999999876 678899999999998888887777653 3 489999999999999986421
Q ss_pred ccChHHHHHHHHHHHHhcCeEeeC-CCCCCCC---CCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhhc
Q 011570 376 EQTYEAEMALWRVIINEVKLNVSP-GSSFHCP---NPGWFRVCFANMDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 376 ~~~~~~~~~~~~~Ll~~~gV~v~p-g~~f~~~---~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
.-.-.|.++.||.+.| |..|... .+..|||+.++.+.|+++.+++.+.-+++-..-|
T Consensus 359 --------krvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~la~~e 419 (425)
T PF12897_consen 359 --------KRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVKLAAVE 419 (425)
T ss_dssp --------HHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3344567789999988 7777543 2457999999889999999999998776554433
No 122
>PLN02822 serine palmitoyltransferase
Probab=99.97 E-value=6.7e-28 Score=249.19 Aligned_cols=315 Identities=17% Similarity=0.195 Sum_probs=227.7
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEE
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQL 168 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~ 168 (483)
.|++..++.+|+++||++++ .++.|++++|.+ ++..++.+++++||.|++...+|..+...+... |.++
T Consensus 149 ~yg~~~~~~~Lee~La~~~~---------~~~~i~~s~G~~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls-~~~~ 217 (481)
T PLN02822 149 FYGTIDVHLDCETKIAKFLG---------TPDSILYSYGLS-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLS-RSTI 217 (481)
T ss_pred cccCHHHHHHHHHHHHHHhC---------CCCEEEECCHHH-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHc-CCeE
Confidence 46667778999999999987 467899999888 578888999999999999988887777777765 8899
Q ss_pred EEeecCCCCCcccCHHHHHHHHHHHHhc---CCce-eEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC
Q 011570 169 VPVVCDSSNDFKVTMEALEAAYEKAQES---NIRI-KGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT 244 (483)
Q Consensus 169 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~---~~~~-~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~ 244 (483)
+.++.+ |.+.++..+++...+ .+++ ++|++..++|+||.+.+ +++|+++|++||+++|+||+|+..
T Consensus 218 ~~~~~n-------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~g 287 (481)
T PLN02822 218 VYFKHN-------DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFG 287 (481)
T ss_pred EEECCC-------CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCcccc
Confidence 888765 345555555443222 1234 68888888999999999 888999999999999999999866
Q ss_pred ccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh---cC-CCChHHHHHHHH
Q 011570 245 VFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS---FG-LVSSQTQHLIAT 320 (483)
Q Consensus 245 ~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~---~~-~~s~~~q~~~~~ 320 (483)
+++. .. ..+..... . ...+..++++||||++|++| ||+++ ++.+.+.++.... ++ ..+++.+.++.+
T Consensus 288 vlG~-~G-~G~~e~~~-v--~~~~~dii~~s~sKalg~~G---G~i~g-~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~ 358 (481)
T PLN02822 288 VLGK-SG-RGLSEHFG-V--PIEKIDIITAAMGHALATEG---GFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAIT 358 (481)
T ss_pred ccCC-CC-CChHHHcC-C--CCCCCeEEEecchhhhhhCC---eEEEc-CHHHHHHHHhcCCceeeccccCHHHHHHHHH
Confidence 6653 21 22222211 0 01245688999999999999 99998 5556666553322 22 123555666655
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecCchhhc--cChHHHHHHHHHHHHhcCeEe
Q 011570 321 MLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLHHLLKE--QTYEAEMALWRVIINEVKLNV 397 (483)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~~~~~~--~~~~~~~~~~~~Ll~~~gV~v 397 (483)
+|+. ++. ..+.+++++++++++.+.|.+. |+++..+.+++++++.++..... .+.....+++++|++++||.+
T Consensus 359 aL~~---l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v 434 (481)
T PLN02822 359 AIDV---LED-NPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLV 434 (481)
T ss_pred HHHH---HHh-CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEE
Confidence 6532 222 2456788999999999999987 88887778889999999642110 111123478999997789999
Q ss_pred eCCC--CCCCC-CCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 398 SPGS--SFHCP-NPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 398 ~pg~--~f~~~-~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
.|+. .|+.. .+.++|++++. .+++++++++++|++++.+.
T Consensus 435 ~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~ 478 (481)
T PLN02822 435 VVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASV 478 (481)
T ss_pred EeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence 9773 33211 24579999865 69999999999999988764
No 123
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=6.8e-28 Score=245.80 Aligned_cols=295 Identities=16% Similarity=0.214 Sum_probs=212.5
Q ss_pred cHHHHHHHHHHHHhhhCCCCCc-CCCcEEEeCChhHHHHHHHHHh----cCCCCeEEEeCCCCcC----hHHHHhhhcCc
Q 011570 96 LPEFRNAVAKFMGKVRGNRITF-DPDRIVMSGGATGAHETVAFCL----ADPGDAFLVPTPYYPG----FDRDLRWRTGV 166 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~-~~~~i~it~G~~~al~~~~~~l----~~~gd~Vlv~~P~y~~----~~~~~~~~~G~ 166 (483)
..++|+.+|++++ + ++++|++|+|++++++.++.++ +++||+|++++|.|++ +...++.. |+
T Consensus 65 ~~~~r~~la~~~g--------~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~-g~ 135 (401)
T PRK10874 65 YEAAREQVAQLLN--------APDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQT-GA 135 (401)
T ss_pred HHHHHHHHHHHcC--------CCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHh-CC
Confidence 5688888998876 4 6889999999999999999998 4799999999999865 33444554 99
Q ss_pred EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCcc
Q 011570 167 QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVF 246 (483)
Q Consensus 167 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~ 246 (483)
+++.++.+. ++.+|++.+++++.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+...+
T Consensus 136 ~v~~v~~~~--~~~~d~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~ 204 (401)
T PRK10874 136 KVVKLPLGA--DRLPDVDLLPELITP------RTRILALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHF 204 (401)
T ss_pred EEEEEecCC--CCcCCHHHHHHhcCc------CcEEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCcccccc
Confidence 999999864 467899999998854 7899999999999999998 77888889999999999999963212
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh---------------------
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--------------------- 305 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--------------------- 305 (483)
. .++..+ +..+++.|++|.+|.+| +||+++++ .+.+.+....
T Consensus 205 ~-----~~~~~~---------~~d~~~~s~~K~~gp~G--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (401)
T PRK10874 205 P-----ADVQAL---------DIDFYAFSGHKLYGPTG--IGVLYGKS-ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPW 267 (401)
T ss_pred c-----CCchhc---------CCCEEEEecccccCCCc--cEEEEEch-HHHhcCCCeecCCcceEeeccCccCCCCChh
Confidence 1 222211 34567789999998777 59999854 4433322110
Q ss_pred hc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecCchhhccChHHH
Q 011570 306 SF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLHHLLKEQTYEAE 382 (483)
Q Consensus 306 ~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~~~~~~~~~~~~ 382 (483)
.+ ++.+.+.+.++.+++.... +.-..+.+++.++.++++.+.|+++ |+++..+..+.++++.++.. . .
T Consensus 268 ~~e~Gt~~~~~~~al~~al~~l~--~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~-~------~ 338 (401)
T PRK10874 268 RFEAGTPNVAGVIGLSAALEWLA--DIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLLAFDFAGV-H------H 338 (401)
T ss_pred hccCCCcCHHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCc-C------H
Confidence 01 2234345555554442111 1112335566777788899999887 88877555555777776531 1 2
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCC------CCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 383 MALWRVIINEVKLNVSPGSSFHC------PNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 383 ~~~~~~Ll~~~gV~v~pg~~f~~------~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
.++...| .++||.+++|..|.. ...+++|+|++. .++++++.+++.|+++++..
T Consensus 339 ~~~~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 339 SDLVTLL-AEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred HHHHHHH-HHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 2566555 467999999986642 125789999986 59999999999999987653
No 124
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.97 E-value=8.2e-28 Score=239.58 Aligned_cols=300 Identities=18% Similarity=0.167 Sum_probs=207.5
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH---HHhhhcC
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR---DLRWRTG 165 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---~~~~~~G 165 (483)
.|++.....++++.++++++ ++++++++|+++++..++.+++++||.|+++.|+|..+.. .... .|
T Consensus 27 ~~~~~~~~~~l~~~~a~~~g----------~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~~~~~~~~~~~~~-~g 95 (338)
T cd06502 27 VYGEDPTTAKLEARAAELFG----------KEAALFVPSGTAANQLALAAHTQPGGSVICHETAHIYTDEAGAPEFL-SG 95 (338)
T ss_pred ccCCCHHHHHHHHHHHHHhC----------CCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcceeeecCCcHHHH-cC
Confidence 46555567788888888764 4577788888899999999999999999999999876443 2333 49
Q ss_pred cEEEEeecCCCCCcccCHHHHHHHHHHHHh-cCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC
Q 011570 166 VQLVPVVCDSSNDFKVTMEALEAAYEKAQE-SNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT 244 (483)
Q Consensus 166 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~-~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~ 244 (483)
++++.++.+. +.+|++++++++.+... ..+++++|+++||||| |.+++.+++++|+++|+++|+++|+||+|...
T Consensus 96 ~~~~~v~~~~---~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~~~livDea~~~~ 171 (338)
T cd06502 96 VKLLPVPGEN---GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENGLPLHLDGARLAN 171 (338)
T ss_pred ceEEeecCCC---CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcCCeEeechHHHHH
Confidence 9999998742 57999999999864210 0126789999999997 67779999999999999999999999998643
Q ss_pred ccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh-c---CCCChHHHHHHHH
Q 011570 245 VFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS-F---GLVSSQTQHLIAT 320 (483)
Q Consensus 245 ~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~-~---~~~s~~~q~~~~~ 320 (483)
.... .. .++..+.. ..+ +++.|+||+||++| |+++..++.+.+.+..... + ..++++.+.++..
T Consensus 172 ~~~~-~~-~~~~~~~~-----~~d--~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 239 (338)
T cd06502 172 AAAA-LG-VALKTYKS-----GVD--SVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLA 239 (338)
T ss_pred HHHh-cC-CCHHHHHh-----cCC--EEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHH
Confidence 2111 11 13333321 123 45779999999887 5544335666666554432 1 2245567777777
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHH--HhcCeEee
Q 011570 321 MLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVII--NEVKLNVS 398 (483)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll--~~~gV~v~ 398 (483)
.|....+ .+..+++.++++++.+.|+++|+.+.++.++ |+.++++.. . .....+.+.+. .++||.+.
T Consensus 240 ~L~~~~~-----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~v~~~~~---~--~~~~~l~~~l~~~~~~gi~~~ 308 (338)
T cd06502 240 ALENDLW-----LRRLRHDHEMARRLAEALEELGGLESEVQTN-IVLLDPVEA---N--AVFVELSKEAIERRGEGVLFY 308 (338)
T ss_pred HhcCchH-----HHHHHHHHHHHHHHHHHHHhcCCCcccccCC-eEEEecCCc---c--HHHHHHHHHHHHhhhCCEEEE
Confidence 7776443 2333556667788999999888876666665 666666531 1 01113333333 14699887
Q ss_pred CCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHH
Q 011570 399 PGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITS 432 (483)
Q Consensus 399 pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~ 432 (483)
+.. .+++|++++. .+++++++++++|++
T Consensus 309 ~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 309 AWG------EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred ecC------CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 642 2689999976 499999999998864
No 125
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.96 E-value=1.3e-27 Score=243.46 Aligned_cols=296 Identities=17% Similarity=0.201 Sum_probs=209.4
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh----cCCCCeEEEeCCCCcC----hHHHHhhhcCcE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL----ADPGDAFLVPTPYYPG----FDRDLRWRTGVQ 167 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l----~~~gd~Vlv~~P~y~~----~~~~~~~~~G~~ 167 (483)
..++|+.+|++++. -++++|++|+|++++++.++.++ +++||+|++++|.|++ +...++.. |++
T Consensus 62 ~~~~r~~la~~~g~-------~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~-g~~ 133 (398)
T TIGR03392 62 YELARQQVARFLNA-------PDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQT-GAK 133 (398)
T ss_pred HHHHHHHHHHHhCC-------CCCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHc-CcE
Confidence 46789999998872 14789999999999999999887 5889999999999876 33444554 999
Q ss_pred EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccC
Q 011570 168 LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFT 247 (483)
Q Consensus 168 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~ 247 (483)
++.++++. ++.+|++.+++++.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+...+
T Consensus 134 v~~v~~~~--~~~~~~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~- 201 (398)
T TIGR03392 134 VVKLPIGA--DLLPDIRQLPELLTP------RTRILALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHG- 201 (398)
T ss_pred EEEEecCC--CCCcCHHHHHHHhcc------CceEEEEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCC-
Confidence 99999864 357899999998864 7899999999999999998 77788899999999999999964211
Q ss_pred CCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh---------------------h
Q 011570 248 KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS---------------------S 306 (483)
Q Consensus 248 ~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~---------------------~ 306 (483)
+ .++..+ +..+++.|++|.+|.+| +||++++ +.+.+.+.... .
T Consensus 202 ---~-~~~~~~---------~~d~~~~s~~K~~gp~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (398)
T TIGR03392 202 ---P-PDVQAL---------DIDFYAFSGHKLYGPTG--IGVLYGK-TELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHR 265 (398)
T ss_pred ---C-CChhhc---------CCCEEEEecccccCCCc--eEEEEEc-HHHHhhCCCeecCCceEeeccccccccCCChhh
Confidence 1 222222 33466788899998666 8999985 44433321110 0
Q ss_pred c--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecCchhhccChHHHH
Q 011570 307 F--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLHHLLKEQTYEAEM 383 (483)
Q Consensus 307 ~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~ 383 (483)
+ ++.+.+...++.+++.--. +.-.++..++..+.++++.+.|.++ |+++..+..+.++++.++.. . ..
T Consensus 266 ~e~GT~~~~~~~a~~~al~~l~--~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~-~------~~ 336 (398)
T TIGR03392 266 FEAGTPNIAGVIGLSAALEWLT--DIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLAFDFAGV-H------HS 336 (398)
T ss_pred ccCCCCCHHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCc-C------HH
Confidence 1 2223333333333332100 1112344566677778888888877 78776544455777776531 1 22
Q ss_pred HHHHHHHHhcCeEeeCCCCCCC------CCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 384 ALWRVIINEVKLNVSPGSSFHC------PNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 384 ~~~~~Ll~~~gV~v~pg~~f~~------~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
++...|. ++||.|++|..|.. ..++++|+|++. .++++++.+++.|++++++.
T Consensus 337 ~l~~~L~-~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 337 DLAALLA-ESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred HHHHHHH-hCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 5666654 67999999986632 125799999976 59999999999999987753
No 126
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.96 E-value=2.2e-27 Score=242.18 Aligned_cols=347 Identities=16% Similarity=0.129 Sum_probs=228.9
Q ss_pred cccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCC
Q 011570 48 VIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGG 127 (483)
Q Consensus 48 ~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G 127 (483)
.++|..+++.+++. +.+++...... ..+.. ......|+...+.+.+++.+++++.+.+| .+..+|++++
T Consensus 21 ~~~~~~~~~~~~~~-v~~a~~~~~~~----~~~~g-~~~~~~~~~~~~~~~l~~~~~~~~~~~~g----~~~~~v~~~s- 89 (402)
T cd00378 21 TLELIASENFTSPA-VMEAMGSDLTN----KYAEG-YPGKRYYGGCEYVDEIEDLAIERAKKLFG----AEYANVQPHS- 89 (402)
T ss_pred CeeeeccCCcCCHH-HHHHhcccccc----cccCC-CCCCcccCCchHHHHHHHHHHHHHHHHhC----CCceeeecCC-
Confidence 57888887777544 44444332100 00000 01123465666678888877777777666 3445566665
Q ss_pred hhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH-----HhhhcCcEEEEeecCCC-CCcccCHHHHHHHHHHHHhcCCcee
Q 011570 128 ATGAHETVAFCLADPGDAFLVPTPYYPGFDRD-----LRWRTGVQLVPVVCDSS-NDFKVTMEALEAAYEKAQESNIRIK 201 (483)
Q Consensus 128 ~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~-----~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~ 201 (483)
+++++..++.++++|||+|+++.|+|+.+... ++.. |.++..++++.+ .++.+|++.+++++.+ .+++
T Consensus 90 gt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~id~~~l~~~i~~-----~~~~ 163 (402)
T cd00378 90 GSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSAS-GKLFESVPYGVDPETGLIDYDALEKMALE-----FKPK 163 (402)
T ss_pred cHHHHHHHHHHhcCCCCEEEEecCccCcccccccccccccc-ceeEEEecCCcCcccCCcCHHHHHHHHHh-----CCCC
Confidence 57999999999999999999999999876443 4444 887777776543 2678999999999864 2688
Q ss_pred EEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccc-ccCccCCCCCcchHHHhhhhccccCCCeEEEEecCcccc
Q 011570 202 GVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIY-AATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDM 280 (483)
Q Consensus 202 ~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay-~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~ 280 (483)
+|++++|+||+ ..+ +++|+++|+++|++||+|++| .++.+.+ ....++. ...++++|+||++
T Consensus 164 ~v~~~~~~~~~--~~~---~~~I~~l~~~~~~~li~D~a~~~g~~~~g-~~~~~~~-----------~~dv~~~s~sK~l 226 (402)
T cd00378 164 LIVAGASAYPR--PID---FKRFREIADEVGAYLLVDMAHVAGLVAGG-VFPNPLP-----------GADVVTTTTHKTL 226 (402)
T ss_pred EEEecCcccCC--CcC---HHHHHHHHHhcCCEEEEEccchhhhhhcc-cCCCccc-----------CCcEEEeccccCC
Confidence 99999998874 334 888999999999999999996 4333332 1111111 1126789999977
Q ss_pred CCCCceEEEEEecChHHHHHHHHhhhcCC--CCh-HHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcee
Q 011570 281 GFPGFRVGIIYSYNDQVVSCARKMSSFGL--VSS-QTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGC 357 (483)
Q Consensus 281 g~~GlRiG~li~~~~~l~~~~~~~~~~~~--~s~-~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~ 357 (483)
+|+|.||++++++.+.+.+......+. .+. ..+.+++.++.. .......+.+++++++++++.+.|.+.|+++
T Consensus 227 --~G~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 302 (402)
T cd00378 227 --RGPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKE--ALEPEFKAYAKQVVENAKALAEALKERGFKV 302 (402)
T ss_pred --CCCCceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 889999999966466666544332211 121 222222222221 1111345666778999999999999999887
Q ss_pred e-cCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC----CCCCEEEEEeccC-----CHHHHHHHH
Q 011570 358 L-KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC----PNPGWFRVCFANM-----DDRTMEIAL 427 (483)
Q Consensus 358 ~-~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~----~~~~~iRis~~~~-----~~e~l~~~l 427 (483)
. .+.+++++|++++..... . ..+..+++++||.+.++..... ..+.++|+++... ++++++.++
T Consensus 303 ~~~~~~~~~v~v~~~~~~~~-----~-~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~ 376 (402)
T cd00378 303 VSGGTDNHLVLVDLRPKGIT-----G-KAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIA 376 (402)
T ss_pred eecCCCCeEEEEeCCccCCC-----H-HHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHH
Confidence 6 456789999999742111 1 2334456788999986432221 1346899999642 489999999
Q ss_pred HHHHHHHHHhh
Q 011570 428 SRITSFMLKNV 438 (483)
Q Consensus 428 ~~L~~~l~~~~ 438 (483)
+.|++++++..
T Consensus 377 ~~l~~~~~~~~ 387 (402)
T cd00378 377 DFIARALKDAE 387 (402)
T ss_pred HHHHHHHhccc
Confidence 99999886654
No 127
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.96 E-value=3.2e-27 Score=237.44 Aligned_cols=299 Identities=15% Similarity=0.193 Sum_probs=205.6
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS 175 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~ 175 (483)
..++++.+|++++ + +++++|+|+++++..++.+++++||+|+++.++|......++.. |++++.++.+.
T Consensus 46 ~~~l~~~la~~~g--------~--~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~ 114 (361)
T cd06452 46 IKDFHHDLAEFLG--------M--DEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSYVAAERA-GLNVREVPNTG 114 (361)
T ss_pred HHHHHHHHHHHcC--------C--ceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHHHHHHhc-CCEEEEEecCC
Confidence 5789999999876 3 78999999999999999999999999999999887776666665 99999999886
Q ss_pred CCCcccCHHHHHHHHHHHHhc-CCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcch
Q 011570 176 SNDFKVTMEALEAAYEKAQES-NIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVS 254 (483)
Q Consensus 176 ~~~~~~d~~~l~~~i~~~~~~-~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s 254 (483)
+++|.+|++.+++++++...+ ++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.. .. .+ .+
T Consensus 115 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~---g~-~~-~~ 186 (361)
T cd06452 115 HPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---AKKIAKVCHEYGVPLLLNGAYTV---GR-MP-VS 186 (361)
T ss_pred CCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---HHHHHHHHHHcCCeEEEECCccc---CC-cC-CC
Confidence 656889999999998753211 236899999999999999876 78888889999999999999973 22 12 22
Q ss_pred HHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCCh----------HHHHHHHHhcCC
Q 011570 255 IAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSS----------QTQHLIATMLSD 324 (483)
Q Consensus 255 ~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~----------~~q~~~~~~l~~ 324 (483)
...+ +..++++|+||.++ ++.|+||++++ +.+.+.+......+.++. ....++.+.+.
T Consensus 187 ~~~~---------~~d~~~~s~~K~l~-~~~~~G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~- 254 (361)
T cd06452 187 GKEL---------GADFIVGSGHKSMA-ASAPIGVLATT-EEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFP- 254 (361)
T ss_pred HHHc---------CCCEEEecCCcccc-CCCCeEEEEEC-HHHHHHHhccccccccceeeeeccccCchHHHHHHHHHH-
Confidence 2222 45688999999998 66699999995 555555544332211111 11222222221
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceeec--CCceEEEeeecCchhhcc--ChHHHHHHHHHHHHhcCeEeeC
Q 011570 325 DQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLK--SNAGLFLWMDLHHLLKEQ--TYEAEMALWRVIINEVKLNVSP 399 (483)
Q Consensus 325 ~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~--~~~g~f~~~~l~~~~~~~--~~~~~~~~~~~Ll~~~gV~v~p 399 (483)
+..++++...+. .++++++.+.|+++ |++++. +....|+.++.+...... ......++.+.|++ +||.+..
T Consensus 255 --~~~~~~~~~~~~-~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~gI~~~~ 330 (361)
T cd06452 255 --HVKERVKRWDEE-VEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKK-RGIHGIK 330 (361)
T ss_pred --HHHHHHHHHHHH-HHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHH-cCceEEc
Confidence 122233333323 33447888999998 888762 223446667765211100 00011246777765 5998531
Q ss_pred CCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 400 GSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 400 g~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
....+++|++....++++++.++++|+++.
T Consensus 331 -----~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 331 -----PGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred -----CCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 123458999994358999999999998654
No 128
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=2.4e-27 Score=242.26 Aligned_cols=299 Identities=14% Similarity=0.144 Sum_probs=208.7
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCcEEEEee
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVV 172 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~ 172 (483)
.+.+|++.+|++++ .++.|++++|+ +++..++.++. .+||.|+++.+.|..+...++.. |.++..++
T Consensus 92 ~~~~Le~~la~~~g---------~~~~i~~~sG~-~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~-g~~~~~~~ 160 (410)
T PRK13392 92 PHVLLERELADLHG---------KESALLFTSGY-VSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRS-GAEKQVFR 160 (410)
T ss_pred HHHHHHHHHHHHhC---------CCCEEEECcHH-HHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHc-CCeEEEEe
Confidence 36789999999876 35678888875 56666666664 38998888887888777777664 88877665
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
.+ |.+.+++.++... ..++++|++++|+||||.+++ +++|.++|+++|+++|+||+|....++. ..
T Consensus 161 ~~-------d~~~l~~~l~~~~--~~~t~~v~i~~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~-~g- 226 (410)
T PRK13392 161 HN-------DLADLEEQLASVD--PDRPKLIAFESVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGA-RG- 226 (410)
T ss_pred CC-------CHHHHHHHHHhcc--CCCCEEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCC-CC-
Confidence 32 4556666665321 236889999999999999999 7788888889999999999998544543 21
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc----CCCChHHHHHHHHhcCChhHH
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF----GLVSSQTQHLIATMLSDDQFV 328 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~----~~~s~~~q~~~~~~l~~~~~~ 328 (483)
..+..... + .....++++||||.||++| ||+++ ++.+.+.++..... ...+++.+.++.++|+....
T Consensus 227 ~g~~~~~~-~---~~~~div~~tlsK~~g~~G---G~~~~-~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~- 297 (410)
T PRK13392 227 GGIAERDG-L---MDRIDMIQGTLAKAFGCLG---GYIAA-SADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKT- 297 (410)
T ss_pred Cchhhhcc-C---CCCCcEEEEEChHhhhccc---chhhc-CHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhc-
Confidence 22222111 0 1122378899999999988 99998 55666655554422 12344667777676653221
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC-C
Q 011570 329 EKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP-N 407 (483)
Q Consensus 329 ~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~-~ 407 (483)
....++.+.++++++.+.|++.|+++.++.+++ +.+.++.. ....+++++|++++||.++++.....+ +
T Consensus 298 ---~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~~i~~~~~------~~~~~~~~~L~~~~GI~v~~~~~p~~~~~ 367 (410)
T PRK13392 298 ---SQTERDAHQDRVAALKAKLNANGIPVMPSPSHI-VPVMVGDP------TLCKAISDRLMSEHGIYIQPINYPTVPRG 367 (410)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCE-EEEEeCCH------HHHHHHHHHHHHhCCEEEeeeCCCCCCCC
Confidence 234456778888999999999899887777764 44444321 123478888887789999987544332 3
Q ss_pred CCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 408 PGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 408 ~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
..++||++.. .++++++.++++|++++++.
T Consensus 368 ~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 368 TERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred CceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 4689999954 49999999999999886543
No 129
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.96 E-value=5.8e-27 Score=237.71 Aligned_cols=338 Identities=14% Similarity=0.150 Sum_probs=218.5
Q ss_pred CCCCcccccchhhh-h-cHHHHHHHHhcCCCCcccccccccccc-ccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 44 NPNGVIQMGLAENL-L-CHELVEDWLMNNPKASICSAEGLNEFK-GIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 44 ~~~~~i~l~~~~n~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
....+|||+.+++. + +++.+.+++.+.... +. ....|....|..++++.+++.+.+.++ .++
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~----------~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-----~~~ 101 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARR----------YGAGSGGSRLVTGNSPAHEALEEELAEWFG-----AER 101 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHh----------cCCCCCCcCcccCCcHHHHHHHHHHHHHhC-----CCc
Confidence 34678999988752 2 334455544331100 00 011122223434444444444444333 245
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
.|++++ +++++..++..++++||.|+++.|+|+.+...+... |.+++.++. .|++.+++.+++. .+++
T Consensus 102 ~i~~~~-g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~-g~~~~~~~~-------~d~~~l~~~i~~~---~~~~ 169 (385)
T PRK05958 102 ALLFSS-GYAANLAVLTALAGKGDLIVSDKLNHASLIDGARLS-RARVRRYPH-------NDVDALEALLAKW---RAGR 169 (385)
T ss_pred EEEECc-HHHHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhc-CCceEEeCC-------CCHHHHHHHHHhc---cCCC
Confidence 555555 455666677888999999999999999998887765 999888764 3788898888641 1134
Q ss_pred eEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC-CCcchHHHhhhhccccCCCeEEEEecCccc
Q 011570 201 KGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE-SSFVSIAEIIDQDIACNRNLIHIVYSLSKD 279 (483)
Q Consensus 201 ~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~-~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~ 279 (483)
.++++.+++||||...+ +++|+++|++||+++|+||+|....+... ..+.....+. ..++++++.|+||.
T Consensus 170 ~lvi~~~~~~~~G~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~------~~~~~i~~~s~sK~ 240 (385)
T PRK05958 170 ALIVTESVFSMDGDLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLA------GEPDVILVGTLGKA 240 (385)
T ss_pred eEEEEEecccCCCCcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCC------CCCceEEEEechhh
Confidence 55566678999999877 88889999999999999999976544421 1111111121 23678999999999
Q ss_pred cCCCCceEEEEEecChHHHHHHHHhh-hc---CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 011570 280 MGFPGFRVGIIYSYNDQVVSCARKMS-SF---GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGI 355 (483)
Q Consensus 280 ~g~~GlRiG~li~~~~~l~~~~~~~~-~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi 355 (483)
+|++| ||+++ ++.+.+.+.... .+ ...++....++.++++... .. ....+++.++++++.+.|++.|+
T Consensus 241 ~~~~G---g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~---~~-~~~~~~~~~~~~~l~~~L~~~~~ 312 (385)
T PRK05958 241 LGSSG---AAVLG-SETLIDYLINRARPFIFTTALPPAQAAAARAALRILR---RE-PERRERLAALIARLRAGLRALGF 312 (385)
T ss_pred cccCC---cEEEc-CHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh---cC-HHHHHHHHHHHHHHHHHHHHcCC
Confidence 99777 99988 455555543322 22 1233444444444443221 11 34566788888999999998888
Q ss_pred eeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC-CCCEEEEEecc-CCHHHHHHHHHHHHHH
Q 011570 356 GCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP-NPGWFRVCFAN-MDDRTMEIALSRITSF 433 (483)
Q Consensus 356 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~-~~~~iRis~~~-~~~e~l~~~l~~L~~~ 433 (483)
++.++.++ |+|+.++... ...++.+.|.+ +||.+.++..+... +++++||+++. .+++++++++++|+++
T Consensus 313 ~~~~~~~~-~~~~~~~~~~------~~~~~~~~l~~-~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 313 QLMDSQSA-IQPLIVGDNE------RALALAAALQE-QGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred CcCCCCCC-EEEEEeCCHH------HHHHHHHHHHH-CCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 87776654 7788876421 23367788764 59999986544322 34689999974 5999999999999875
No 130
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.96 E-value=1.5e-26 Score=231.40 Aligned_cols=295 Identities=16% Similarity=0.173 Sum_probs=202.5
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS 175 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~ 175 (483)
..++++.++++++ . ++. ++++++++++..++.+++++||.|+++.|+|+.+...+... |++++.++.
T Consensus 48 ~~~l~~~la~~~~--------~-~~~-iv~~sg~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~~~~-- 114 (349)
T cd06454 48 HEELEEELAEFHG--------K-EAA-LVFSSGYAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLS-GAKKRIFKH-- 114 (349)
T ss_pred HHHHHHHHHHHhC--------C-CCE-EEeccHHHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHc-CCceEEecC--
Confidence 4566666666654 1 234 55555567888888888999999999999999988877775 999887752
Q ss_pred CCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchH
Q 011570 176 SNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSI 255 (483)
Q Consensus 176 ~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~ 255 (483)
+|++.+++.+++.. ...++++|++++|+||||...+ +++|+++|+++|+++|+||+|+...+.. .. ...
T Consensus 115 -----~~~~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~-~~-~~~ 183 (349)
T cd06454 115 -----NDMEDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGP-HG-RGV 183 (349)
T ss_pred -----CCHHHHHHHHHHhh-ccCCCeEEEEeccccCCCCccC---HHHHHHHHHHcCCEEEEEccccccccCC-CC-CCh
Confidence 47788888887532 1135678888899999999987 7888899999999999999997433322 11 111
Q ss_pred HHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh-hhc---CCCChHHHHHHHHhcCChhHHHHH
Q 011570 256 AEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM-SSF---GLVSSQTQHLIATMLSDDQFVEKF 331 (483)
Q Consensus 256 ~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~-~~~---~~~s~~~q~~~~~~l~~~~~~~~~ 331 (483)
..... ...+.+++++|+||.+|.+| ||++++ +.+.+.+... ..+ +..+++.+.++.+.+... .+
T Consensus 184 ~~~~~----~~~~~~i~~~s~sK~~~~~g---G~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~- 251 (349)
T cd06454 184 EEFGG----LTDDVDIIMGTLGKAFGAVG---GYIAGS-KELIDYLRSYARGFIFSTSLPPAVAAAALAALEVL---QG- 251 (349)
T ss_pred hhhcc----ccccCcEEEeechhhhcccC---CEEECC-HHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHH---hc-
Confidence 11110 02356788999999998655 999984 4554444332 222 234555555555554321 11
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC-CCCCE
Q 011570 332 IAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC-PNPGW 410 (483)
Q Consensus 332 ~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~-~~~~~ 410 (483)
....+++++++++.+.+.|.+.|+++..+.++++.++.++.. ....++.+.|+++ ||.+.++..... ...++
T Consensus 252 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~------~~~~~~~~~L~~~-gI~~~~~~~~~~~~~~~~ 324 (349)
T cd06454 252 GPERRERLQENVRYLRRGLKELGFPVGGSPSHIIPPLIGDDP------AKAVAFSDALLER-GIYVQAIRYPTVPRGTAR 324 (349)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcEEEEeCCCh------HHHHHHHHHHHhC-CceEEEecCCccCCCCCe
Confidence 345567888888999999988888877665665555544421 1234778888766 999988642211 12468
Q ss_pred EEEEecc-CCHHHHHHHHHHHHHH
Q 011570 411 FRVCFAN-MDDRTMEIALSRITSF 433 (483)
Q Consensus 411 iRis~~~-~~~e~l~~~l~~L~~~ 433 (483)
+|++++. .+++++++++++|+++
T Consensus 325 iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 325 LRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHh
Confidence 9999976 5999999999999764
No 131
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.96 E-value=4e-26 Score=229.14 Aligned_cols=294 Identities=18% Similarity=0.172 Sum_probs=205.5
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCC-CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC--hHHHHhhhcCcEEEEeec
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDP-DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPG--FDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~-~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~--~~~~~~~~~G~~~~~v~~ 173 (483)
.++++.++++++ +++ +.+++|+|+++++..++.+++.+||.|+++.++|.. +...++.. |.+++.++.
T Consensus 35 ~~~~~~la~~~g--------~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~-g~~~~~v~~ 105 (356)
T cd06451 35 DEILEGLRYVFQ--------TENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERY-GADVDVVEK 105 (356)
T ss_pred HHHHHHHHHHhc--------CCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHh-CCCeEEeec
Confidence 456666666665 334 457888889999999999999999999999988765 44555665 999999998
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcc
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFV 253 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~ 253 (483)
++ ++.+|++.+++.+++ .++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|. ++. .+ .
T Consensus 106 ~~--~~~~~~~~l~~~i~~-----~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~~~~li~D~~~~---~g~-~~-~ 170 (356)
T cd06451 106 PW--GEAVSPEEIAEALEQ-----HDIKAVTLTHNETSTGVLNP---LEGIGALAKKHDALLIVDAVSS---LGG-EP-F 170 (356)
T ss_pred CC--CCCCCHHHHHHHHhc-----cCCCEEEEeccCCCcccccC---HHHHHHHHHhcCCEEEEeeehh---ccC-cc-c
Confidence 65 357899999999864 26889999999999999999 6678888889999999999986 332 11 2
Q ss_pred hHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH----hh----------------hc-CCCCh
Q 011570 254 SIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK----MS----------------SF-GLVSS 312 (483)
Q Consensus 254 s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~----~~----------------~~-~~~s~ 312 (483)
++... +..+++.|++|.++.| .++||++.++ .+.+.+.. .. .. +..+.
T Consensus 171 ~~~~~---------~~d~~~~s~~K~l~~p-~g~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 239 (356)
T cd06451 171 RMDEW---------GVDVAYTGSQKALGAP-PGLGPIAFSE-RALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPV 239 (356)
T ss_pred ccccc---------CccEEEecCchhccCC-CCcceeEECH-HHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChH
Confidence 22111 2235577899999843 4689999954 44444332 00 01 11223
Q ss_pred HHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC---ceEEEeeecCchhhccChHHHHHHHHHH
Q 011570 313 QTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN---AGLFLWMDLHHLLKEQTYEAEMALWRVI 389 (483)
Q Consensus 313 ~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~---~g~f~~~~l~~~~~~~~~~~~~~~~~~L 389 (483)
..+.++.+++.. ......+...++.+++++++.+.|.+.|+++..+. ++.++|+.++...+ ..++++.|
T Consensus 240 ~~~~a~~aal~~--l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~L 311 (356)
T cd06451 240 NLLYALREALDL--ILEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVPEGVD------GDEVVRRL 311 (356)
T ss_pred HHHHHHHHHHHH--HHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECCCCCC------HHHHHHHH
Confidence 333444444322 11222455667778888999999988888776422 34566777764322 23677777
Q ss_pred HHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHH
Q 011570 390 INEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFML 435 (483)
Q Consensus 390 l~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~ 435 (483)
.+++||.+.+|..+. .++++|++++. .+++++++++++|+++++
T Consensus 312 ~~~~gI~~~~g~~~~--~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 312 MKRYNIEIAGGLGPT--AGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred HHhCCEEEecccccc--cCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 765699999987432 34699999965 489999999999988763
No 132
>PRK02948 cysteine desulfurase; Provisional
Probab=99.95 E-value=4.5e-27 Score=238.15 Aligned_cols=296 Identities=15% Similarity=0.157 Sum_probs=211.6
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc----CCCCeEEEeCCCCcChHH---HHhhhcCcEE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA----DPGDAFLVPTPYYPGFDR---DLRWRTGVQL 168 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~----~~gd~Vlv~~P~y~~~~~---~~~~~~G~~~ 168 (483)
..++|+.+|++++ .++++|++|+|+++++..++.+++ ++||.|+++.+.|+.+.. .++.. |+++
T Consensus 45 ~~~~r~~la~~~g--------~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~-g~~v 115 (381)
T PRK02948 45 LQVCRKTFAEMIG--------GEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQ-GYTV 115 (381)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhC-CCEE
Confidence 4567777887776 478899999999999999888875 578999999877665544 34544 9999
Q ss_pred EEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCC
Q 011570 169 VPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTK 248 (483)
Q Consensus 169 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~ 248 (483)
+.+++++ ++.+|++.+++++.+ ++++|++++|+||||.+++ +++|.++|+++|+++|+|+++. ++.
T Consensus 116 ~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~---~g~ 181 (381)
T PRK02948 116 TEIPVDK--SGLIRLVDLERAITP------DTVLASIQHANSEIGTIQP---IAEIGALLKKYNVLFHSDCVQT---FGK 181 (381)
T ss_pred EEEeeCC--CCCCCHHHHHHhcCC------CCEEEEEECCcCCcEeehh---HHHHHHHHHHcCCEEEEEChhh---ccc
Confidence 9999874 357899999988753 6789999999999999999 6778888889999999998765 332
Q ss_pred CCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChH-HHHHHH-----HhhhcCCCChHHHHHHHHhc
Q 011570 249 ESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQ-VVSCAR-----KMSSFGLVSSQTQHLIATML 322 (483)
Q Consensus 249 ~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~-l~~~~~-----~~~~~~~~s~~~q~~~~~~l 322 (483)
.+ ..+. ..+..+++.|+||.+|.+| +|+++++++. +..... .....++++.+++.++.+++
T Consensus 182 -~~-~~~~---------~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al 248 (381)
T PRK02948 182 -LP-IDVF---------EMGIDSLSVSAHKIYGPKG--VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAA 248 (381)
T ss_pred -cc-cCcc---------cCCCCEEEecHHhcCCCCc--EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHH
Confidence 21 1211 2356677899999999888 7998885442 111100 00023557778888777777
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEe-----eecCchhhccChHHHHHHHHHHHHhcCeEe
Q 011570 323 SDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLW-----MDLHHLLKEQTYEAEMALWRVIINEVKLNV 397 (483)
Q Consensus 323 ~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~-----~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v 397 (483)
... .++.++.++++++.++++.+.|+++|+++.+.....++. +.++. . . ..++...| +++||.|
T Consensus 249 ~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~~-~-----~-~~~~~~~l-~~~gI~v 317 (381)
T PRK02948 249 ENI---LKNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKG-I-----E-GQYTMLEC-NRRGIAI 317 (381)
T ss_pred HHH---HHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeCC-C-----C-HHHHHHhc-ccCCEEE
Confidence 542 234677788899999999999999887665432122221 12221 1 1 22455555 5679999
Q ss_pred eCCCCCCC-----------------CCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 398 SPGSSFHC-----------------PNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 398 ~pg~~f~~-----------------~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
++|..|.. ...+++|+|++. .++++++.+++.|++++++.-
T Consensus 318 ~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 376 (381)
T PRK02948 318 STGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFY 376 (381)
T ss_pred EchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 99875321 014689999986 599999999999999877553
No 133
>PRK07049 methionine gamma-lyase; Validated
Probab=99.95 E-value=1.1e-25 Score=229.28 Aligned_cols=226 Identities=21% Similarity=0.318 Sum_probs=170.7
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH----hhh
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----RWR 163 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----~~~ 163 (483)
.+|+.+. ...|++.||++.+ .+++++++|+++++..++.+++++||+|+++.|+|+.+...+ +.
T Consensus 78 ~R~~~Pt-~~~Le~~lA~leg----------~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~- 145 (427)
T PRK07049 78 SRFNHPN-SEIVEDRLAVYEG----------AESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRN- 145 (427)
T ss_pred cCCCCcC-HHHHHHHHHHHhC----------CCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHh-
Confidence 5676654 6899999999875 357888889899999999999999999999999999997764 33
Q ss_pred cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhh---cCcEEEEccc
Q 011570 164 TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINE---KNIHLVCDEI 240 (483)
Q Consensus 164 ~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~---~~~~iI~Dea 240 (483)
.|++++.++.. .|++.+++++.+... ..++++|++++|+||||.+++.+++.+|++.|.. ++++||+||+
T Consensus 146 ~Gi~~v~~~~~------~d~~~l~~~l~~~~~-~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDet 218 (427)
T PRK07049 146 FGVGAVGFADG------LSEAAIGAAAEAAAA-KGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNT 218 (427)
T ss_pred cCcEEEEEeCC------CCHHHHHHHHHhhcc-CCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECC
Confidence 48888777621 467788877754321 1368999999999999999999999999988654 6899999999
Q ss_pred cccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccC-CCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHH
Q 011570 241 YAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG-FPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHL 317 (483)
Q Consensus 241 y~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~ 317 (483)
|....+. . ++ ..+..|+++||||.+| .+|+|+||++++ +.+.+.+...... ..++++.+.+
T Consensus 219 y~~~~~~--~---pl----------~~g~divv~S~SK~~gG~~glr~G~vv~~-~~l~~~l~~~~~~~g~~ls~~~a~l 282 (427)
T PRK07049 219 LLGPVFQ--K---PL----------EHGADLSVYSLTKYVGGHSDLVAGAVLGR-KALIRQVRALRSAIGTQLDPHSCWM 282 (427)
T ss_pred ccccccC--C---cc----------ccCCCEEEEcCceeecCCCCcEEEEEECC-HHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 8653221 1 11 1244688899999999 699999999984 5566655554443 3377788888
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cc
Q 011570 318 IATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GI 355 (483)
Q Consensus 318 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi 355 (483)
+...++. +..+.++..++++.+.+.|+++ ++
T Consensus 283 ~~r~L~t-------l~~R~~~~~~~a~~la~~L~~~p~V 314 (427)
T PRK07049 283 LGRSLET-------LVLRMERANRNARAVAEFLRDHPKV 314 (427)
T ss_pred HHcCCCh-------HHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 7777753 2333455588889999999887 44
No 134
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.95 E-value=2.6e-26 Score=233.88 Aligned_cols=297 Identities=15% Similarity=0.130 Sum_probs=200.6
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCC-------CeEEEeCCCCcChHHHHhhhcCcEEE
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPG-------DAFLVPTPYYPGFDRDLRWRTGVQLV 169 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~g-------d~Vlv~~P~y~~~~~~~~~~~G~~~~ 169 (483)
.++++++++++.+..+ .+++++|+|+++++..+++++...+ ++|++..++|.++........+....
T Consensus 80 ~~~~~~la~~l~~~~~------~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~ 153 (396)
T PRK02627 80 IEPQEELAEKLVELSG------MDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKY 153 (396)
T ss_pred CHHHHHHHHHHHhhcC------CCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccc
Confidence 6788888888886533 4899999999999999998765433 67999999998776544433222211
Q ss_pred E---eecCCCCCc----ccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCc-CCCCHHHHHHHHHHHhhcCcEEEEcccc
Q 011570 170 P---VVCDSSNDF----KVTMEALEAAYEKAQESNIRIKGVLITNPSNPLG-TFLDRETLKDIVSFINEKNIHLVCDEIY 241 (483)
Q Consensus 170 ~---v~~~~~~~~----~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG-~~~~~~~l~~i~~~a~~~~~~iI~Deay 241 (483)
. .++.. ++ ..|++.+++++. +++++|++++++||+| .+++.+.+++|.++|++||+++|+||+|
T Consensus 154 ~~~~~~~~~--~~~~~~~~d~~~l~~~i~------~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~ 225 (396)
T PRK02627 154 QEGFEPLVE--GFIYVPFNDIEALKAAIT------DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQ 225 (396)
T ss_pred cccCCCCCC--CceEeCCCCHHHHHHhcC------CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 1 11111 11 128899998874 3789999998899999 6889999999999999999999999999
Q ss_pred ccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh--hhcCCCChHHHHHHH
Q 011570 242 AATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM--SSFGLVSSQTQHLIA 319 (483)
Q Consensus 242 ~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~--~~~~~~s~~~q~~~~ 319 (483)
.++.+.+ . +.+.... . ..++ +.||||.++ +|+|+||++++ +.+.+.+... ...+..++++|.++.
T Consensus 226 ~g~g~~g-~-~~~~~~~-~-----~~pd---i~t~sK~~~-~G~rig~~~~~-~~~~~~~~~~~~~~t~~~~~~~~~aa~ 292 (396)
T PRK02627 226 TGMGRTG-K-LFAYQHY-G-----IEPD---IMTLAKGLG-GGVPIGAVLAK-EKVADVFTPGDHGSTFGGNPLACAAAL 292 (396)
T ss_pred cCCCccC-c-eeeehhc-C-----CCCC---EEEEcchhh-CCcccEEEEEc-HHHHhccCCCCCCCCCCCCHHHHHHHH
Confidence 9764443 2 2222111 1 1122 237999999 99999999995 5565555431 222447888999888
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeC
Q 011570 320 TMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSP 399 (483)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~p 399 (483)
++++.... .++.++.++.....++.+.+.+.+.+........|+++|++++. ...+++..++++ ||.+.|
T Consensus 293 ~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~--------~~~~~~~~l~~~-Gv~v~~ 362 (396)
T PRK02627 293 AVIEIIEE-EGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELDR--------PAAEIVKKALEK-GLLINV 362 (396)
T ss_pred HHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEecC--------cHHHHHHHHHHC-CeEEee
Confidence 88763221 12223222222333333433333332222223356789998832 123788888865 999998
Q ss_pred CCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 400 GSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 400 g~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
+. .+++|++++. .+++++++++++|++++++
T Consensus 363 ~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 363 TG------DNVLRLLPPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred cC------CCEEEEECCcccCHHHHHHHHHHHHHHHHh
Confidence 63 3679999863 5999999999999998865
No 135
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=9.8e-26 Score=214.04 Aligned_cols=347 Identities=18% Similarity=0.269 Sum_probs=250.9
Q ss_pred CCCCCCCCCcccccchh--hhh----cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhC
Q 011570 39 YHPTKNPNGVIQMGLAE--NLL----CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRG 112 (483)
Q Consensus 39 ~~~~~~~~~~i~l~~~~--n~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g 112 (483)
|.....+. .|||+++. +.. .++.++++-...... .....|-+..|.+++++++++++-..
T Consensus 20 f~~D~R~~-KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~-----------~~~k~Yl~i~G~~~f~~~~~~llFG~-- 85 (396)
T COG1448 20 FKADPRPN-KVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQ-----------EKTKNYLPIEGLPEFLEAVQKLLFGA-- 85 (396)
T ss_pred HhcCCCcC-eeeeeeeeeeCCCCCcchhHHHHHHHHHhhcc-----------ccccccCCcCCcHHHHHHHHHHhcCC--
Confidence 44445554 48999883 222 145555544432221 13457888999999999999997521
Q ss_pred CCCC-cCCCc--EEEeCChhHHHHHHHHHh--cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHH
Q 011570 113 NRIT-FDPDR--IVMSGGATGAHETVAFCL--ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALE 187 (483)
Q Consensus 113 ~~~~-~~~~~--i~it~G~~~al~~~~~~l--~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~ 187 (483)
..+ ++.+. -+=|.|+|.|+.+....+ ..|...|.+++|+|+.+..++... |.++..+|.-+..+-.+|.+.+.
T Consensus 86 -d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~a-Gl~v~~Y~Yyd~~~~~~df~~ml 163 (396)
T COG1448 86 -DSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAA-GLEVETYPYYDAETKGLDFDGML 163 (396)
T ss_pred -CcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhc-CCceeeeeccccccccccHHHHH
Confidence 111 23333 344899999999988766 346677999999999999999986 99999999866556669999999
Q ss_pred HHHHHHHhcCCceeEEEEeCC-CCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC--CCcchHHHhhhhccc
Q 011570 188 AAYEKAQESNIRIKGVLITNP-SNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE--SSFVSIAEIIDQDIA 264 (483)
Q Consensus 188 ~~i~~~~~~~~~~~~i~l~~P-~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~--~~~~s~~~l~~~~~~ 264 (483)
+.+++. +.-.+|++--+ |||||.-++.+++++|+++.++.+.+.+.|-+|.+ |+.. .....+..+..
T Consensus 164 a~L~~a----~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQG--F~~GleeDa~~lR~~a~---- 233 (396)
T COG1448 164 ADLKTA----PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQG--FADGLEEDAYALRLFAE---- 233 (396)
T ss_pred HHHHhC----CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhh--hccchHHHHHHHHHHHH----
Confidence 998875 22334444433 99999999999999999999999999999999998 4441 12123333433
Q ss_pred cCCCeEEEEecCccccCCCCceEEEEE--ecChHHHHHHH-H-----hhhcCCCChHHHHHHHHhcCChhHHHH---HHH
Q 011570 265 CNRNLIHIVYSLSKDMGFPGFRVGIIY--SYNDQVVSCAR-K-----MSSFGLVSSQTQHLIATMLSDDQFVEK---FIA 333 (483)
Q Consensus 265 ~~~~~vi~~~S~SK~~g~~GlRiG~li--~~~~~l~~~~~-~-----~~~~~~~s~~~q~~~~~~l~~~~~~~~---~~~ 333 (483)
....+++..||||.||+-|-|+|.+. +.+++....+. . ...+.+++.-...+++.+|++++.-.+ .+.
T Consensus 234 -~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~ 312 (396)
T COG1448 234 -VGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELE 312 (396)
T ss_pred -hCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHH
Confidence 23448889999999999999999554 44444443322 1 223444555667788889998764333 356
Q ss_pred HHHHHHHHHHHHHHHhhhcC----CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCC
Q 011570 334 ESAKRIAERHKAFTWGLSQV----GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPG 409 (483)
Q Consensus 334 ~~~~~l~~~~~~l~~~L~~~----gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~ 409 (483)
.+++++.++|..|.+.|++. .+.+...+.|||.+.-+.. +-..+|.+++||++... |
T Consensus 313 ~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gls~-----------~QV~rLree~~IY~v~s--------G 373 (396)
T COG1448 313 EMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGLSP-----------EQVDRLREEFGIYLVAS--------G 373 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCCCH-----------HHHHHHHHhccEEEecC--------C
Confidence 67899999999999999984 4788889999999875543 34677889999987632 2
Q ss_pred EEEEEeccCCHHHHHHHHHHHHHH
Q 011570 410 WFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 410 ~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
|||++..++..++.+.+++.++
T Consensus 374 --Ri~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 374 --RINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred --eeeeccCChhhHHHHHHHHHhh
Confidence 9999889999999999998765
No 136
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.95 E-value=3.4e-25 Score=222.17 Aligned_cols=293 Identities=16% Similarity=0.182 Sum_probs=205.6
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCC--cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCC-CcC-hHHHHhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPD--RIVMSGGATGAHETVAFCLADPGDAFLVPTPY-YPG-FDRDLRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~--~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~-y~~-~~~~~~~~~G~~~~~v 171 (483)
..++|+.++++++ ++++ .|++++|+++++..++..++.+||.|++..+. |+. +...++.. |.+++.+
T Consensus 33 ~~~~~~~la~~~~--------~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~~~~~a~~~-g~~~~~i 103 (355)
T TIGR03301 33 TDQVRDRLLALAG--------GDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGERLAKICEYL-GIPHTDL 103 (355)
T ss_pred HHHHHHHHHHHhc--------CCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhHHHHHHHHc-CCceEEE
Confidence 4677888888776 3333 68889999999999999999888887766655 443 34455554 9999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+.++ ++.+|++.+++++++ +++++.|++++|+||||.+.+ +++|+++|+++|+++|+|++++ ++. .+
T Consensus 104 ~~~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~~livD~~~s---~g~-~~ 170 (355)
T TIGR03301 104 NFSE--YEPPDLNRIEEALAA----DPDITHVATVHHETTTGILNP---LEAIAKVARSHGAVLIVDAMSS---FGA-IP 170 (355)
T ss_pred ecCC--CCCCCHHHHHHHHHh----CCCceEEEEEecCCcccchhH---HHHHHHHHHHcCCEEEEEeccc---cCC-cc
Confidence 8764 457899999999864 235678888999999999988 7888999999999999999875 333 22
Q ss_pred cchHHHhhhhccccCCCeEEEEecCcccc-CCCCceEEEEEecChHHHHHHHHh-------------------hhcCCCC
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDM-GFPGFRVGIIYSYNDQVVSCARKM-------------------SSFGLVS 311 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~li~~~~~l~~~~~~~-------------------~~~~~~s 311 (483)
.++.. .+..++++|++|.+ |++| +||+++++ .+.+.+... ...+..+
T Consensus 171 -~~~~~---------~~~d~~~~s~~K~l~~~~G--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 237 (355)
T TIGR03301 171 -IDIEE---------LDVDALIASANKCLEGVPG--FGFVIARR-DLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPP 237 (355)
T ss_pred -cchhh---------cCccEEEecCCcccccCCc--eeEEEECH-HHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCc
Confidence 22222 24557789999986 5556 69999954 444443310 0112355
Q ss_pred hHHHHHHHHhcCChhHHHH-HHHHHHHHHHHHHHHHHHhhhcCCceeecC---CceEEEeeecCchhhccChHHHHHHHH
Q 011570 312 SQTQHLIATMLSDDQFVEK-FIAESAKRIAERHKAFTWGLSQVGIGCLKS---NAGLFLWMDLHHLLKEQTYEAEMALWR 387 (483)
Q Consensus 312 ~~~q~~~~~~l~~~~~~~~-~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~---~~g~f~~~~l~~~~~~~~~~~~~~~~~ 387 (483)
.+.+.++..++.... +. +.++..++++++++++.+.|++.|+++..+ .++.++|+.++..... +..++.+
T Consensus 238 ~~~~~a~~~al~~~~--~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 311 (355)
T TIGR03301 238 THTVYAFAQALEELE--AEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDPDF----DFDDFYQ 311 (355)
T ss_pred HHHHHHHHHHHHHHH--HcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCCcc----hHHHHHH
Confidence 566555555543211 11 145666678888999999999888876533 3456788888752110 1225666
Q ss_pred HHHHhcCeEeeCCCCCCCCCCCEEEEEe-ccCCHHHHHHHHHHHHHH
Q 011570 388 VIINEVKLNVSPGSSFHCPNPGWFRVCF-ANMDDRTMEIALSRITSF 433 (483)
Q Consensus 388 ~Ll~~~gV~v~pg~~f~~~~~~~iRis~-~~~~~e~l~~~l~~L~~~ 433 (483)
.|. ++||.+.+|..+. .+++||++ ++.++++++++++.|+++
T Consensus 312 ~l~-~~gi~i~~~~~~~---~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 312 ELK-ERGFVIYPGKLTL---ADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred HHH-HCCEEEECCcccc---ccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 665 5699999986543 26899998 446999999999999875
No 137
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.95 E-value=2.5e-25 Score=227.13 Aligned_cols=293 Identities=18% Similarity=0.226 Sum_probs=206.7
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcC-CCcEEEeCChhHHHHHHHHHh----cCCCCeEEEeCCCCcChH----HHHhhhcC
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFD-PDRIVMSGGATGAHETVAFCL----ADPGDAFLVPTPYYPGFD----RDLRWRTG 165 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~-~~~i~it~G~~~al~~~~~~l----~~~gd~Vlv~~P~y~~~~----~~~~~~~G 165 (483)
...++|+.++++++ .+ +++|++|+|+++++.+++.++ +++||+|+++++.|+... ..... .|
T Consensus 63 ~~~~~r~~ia~~~~--------~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~-~g 133 (403)
T TIGR01979 63 AYEAVREKVAKFIN--------AASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAER-TG 133 (403)
T ss_pred HHHHHHHHHHHHhC--------cCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHh-cC
Confidence 35688999999887 34 679999999999999998875 578999999999887643 33344 49
Q ss_pred cEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc
Q 011570 166 VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV 245 (483)
Q Consensus 166 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~ 245 (483)
.+++.++.++ ++.+|++.+++++.+ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+..
T Consensus 134 ~~~~~v~~~~--~~~~~~~~l~~~i~~------~~~lv~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g- 201 (403)
T TIGR01979 134 ATLKFIPLDD--DGTLDLDDLEKLLTE------KTKLVAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVP- 201 (403)
T ss_pred cEEEEEecCC--CCCCCHHHHHHHhcc------CCeEEEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcC-
Confidence 9999999874 457899999998864 7899999999999999999 778888899999999999999632
Q ss_pred cCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--------------------
Q 011570 246 FTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS-------------------- 305 (483)
Q Consensus 246 ~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~-------------------- 305 (483)
. .+ .++.. .+..+++.|++|.+|.+| +|++++++ .+.+.+....
T Consensus 202 --~-~~-~~~~~---------~~~d~~~~s~~K~~gp~G--~g~l~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 265 (403)
T TIGR01979 202 --H-MP-VDVQA---------LDCDFYVFSGHKMYGPTG--IGVLYGKE-ELLEQMPPFLGGGEMIAEVSFEETTYNEAP 265 (403)
T ss_pred --c-cc-cCccc---------cCCCEEEEecccccCCCC--ceEEEEch-HHHhcCCCeecCCCceeecccCccccCCCh
Confidence 1 11 22211 245578899999998667 89999854 3433321100
Q ss_pred -hc--CCCChHHHHHHHHhcCChhHHHH-HHHHHHHHHHHHHHHHHHhhhcC-CceeecCC-----ceEEEeeecCchhh
Q 011570 306 -SF--GLVSSQTQHLIATMLSDDQFVEK-FIAESAKRIAERHKAFTWGLSQV-GIGCLKSN-----AGLFLWMDLHHLLK 375 (483)
Q Consensus 306 -~~--~~~s~~~q~~~~~~l~~~~~~~~-~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~-----~g~f~~~~l~~~~~ 375 (483)
.+ ++.+.....++..+++. +.+ -.+..+++..+.++++.+.|+++ |+++..+. ++ ++.+.++.. .
T Consensus 266 ~~~~~gt~~~~~~~al~~al~~---~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~-~v~~~~~~~-~ 340 (403)
T TIGR01979 266 HKFEAGTPNIAGVIGLGAAIDY---LEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGG-IISFNVEGV-H 340 (403)
T ss_pred hhcCCCCccHHHHHHHHHHHHH---HHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCc-eEEEEeCCc-C
Confidence 01 12233344444444321 111 13455667777888888888877 78887553 44 555666531 1
Q ss_pred ccChHHHHHHHHHHHHhcCeEeeCCCCCCC------CCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 376 EQTYEAEMALWRVIINEVKLNVSPGSSFHC------PNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 376 ~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~------~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
..++.+ .++++||.+++|..+.. ..++++|||++. .++++++.+++.|+++++.
T Consensus 341 ------~~~~~~-~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~ 401 (403)
T TIGR01979 341 ------PHDVGT-ILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKF 401 (403)
T ss_pred ------HHHHHH-HHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 124444 45577999998864321 125789999986 5899999999999887664
No 138
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.95 E-value=2.1e-25 Score=225.87 Aligned_cols=274 Identities=16% Similarity=0.134 Sum_probs=184.9
Q ss_pred CcEEEeCChhHHHHHHHHHh---cC----CCCeEEEeCCCCcChHHHHhhhcCcEEE----EeecCCCCCccc--CHHHH
Q 011570 120 DRIVMSGGATGAHETVAFCL---AD----PGDAFLVPTPYYPGFDRDLRWRTGVQLV----PVVCDSSNDFKV--TMEAL 186 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l---~~----~gd~Vlv~~P~y~~~~~~~~~~~G~~~~----~v~~~~~~~~~~--d~~~l 186 (483)
+++++++|+++++..++.++ .. +||+|++++|+|+.+....... +.... ..++..+..+.. |++.+
T Consensus 85 ~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~l 163 (379)
T TIGR00707 85 DRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSA-TGQPKYQKGFEPLVPGFSYAPYNDIESL 163 (379)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHh-cCChhhhccCCCCCCCceeeCCCCHHHH
Confidence 49999999999999998765 23 3799999999998877665544 33321 122222111111 78999
Q ss_pred HHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhcccc
Q 011570 187 EAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIAC 265 (483)
Q Consensus 187 ~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~ 265 (483)
++.+.+ ++++|+++.++||+|.. ++.+++++|.++|+++|+++|+||+|.++.+.+ . +.+.... .
T Consensus 164 ~~~~~~------~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g-~-~~~~~~~-~----- 229 (379)
T TIGR00707 164 KKAIDD------ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTG-K-FFAYEHY-G----- 229 (379)
T ss_pred HHHhhh------CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-h-hhhHHhc-C-----
Confidence 988864 68888886556777764 699999999999999999999999998754433 2 1222111 1
Q ss_pred CCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHH
Q 011570 266 NRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERH 343 (483)
Q Consensus 266 ~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~ 343 (483)
..++++ ||||.++ +|+|+||++++ +.+.+.+.... ..+..++++|.++.++|+... . ....+++++++
T Consensus 230 ~~~d~~---t~sK~~~-~G~riG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~---~--~~~~~~~~~~~ 299 (379)
T TIGR00707 230 IEPDII---TLAKGLG-GGVPIGATLAK-EEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIE---K--ERLLENVKEKG 299 (379)
T ss_pred CCCCEE---EEccccc-CCcccEEEEEc-HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH---h--hhHHHHHHHHH
Confidence 113332 7899999 99999999994 55666554321 223467888888887764211 0 12334455555
Q ss_pred HHHHHhhhcC----CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-C
Q 011570 344 KAFTWGLSQV----GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-M 418 (483)
Q Consensus 344 ~~l~~~L~~~----gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~ 418 (483)
+.+.+.|.+. ++... +..|+|+|++++.. ..++.+.|. +.||.+.|+. .+++||+++. .
T Consensus 300 ~~~~~~l~~~~~~~~~~~~-~~~g~~~~~~~~~~--------~~~~~~~l~-~~Gv~v~~~~------~~~lRi~~~~~~ 363 (379)
T TIGR00707 300 DYFKERLEELGKNYPNKEV-RGKGLMLGIELEAP--------CKDIVKKAL-EKGLLVNCAG------PKVLRFLPPLII 363 (379)
T ss_pred HHHHHHHHHHHhhCCCCcc-ccCceEEEEEecCc--------HHHHHHHHH-HCCcEEeeCC------CCEEEEECCCcC
Confidence 6666655543 33222 23567899988641 236666665 5699999852 3689999865 5
Q ss_pred CHHHHHHHHHHHHHHH
Q 011570 419 DDRTMEIALSRITSFM 434 (483)
Q Consensus 419 ~~e~l~~~l~~L~~~l 434 (483)
+++++++++++|++++
T Consensus 364 t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 364 TKEEIDEAVSALEEAI 379 (379)
T ss_pred CHHHHHHHHHHHHHhC
Confidence 9999999999998753
No 139
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.95 E-value=2.4e-25 Score=227.37 Aligned_cols=292 Identities=17% Similarity=0.196 Sum_probs=204.5
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHH----hcCCCCeEEEeCCCCcCh----HHHHhhhcCcE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFC----LADPGDAFLVPTPYYPGF----DRDLRWRTGVQ 167 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~----l~~~gd~Vlv~~P~y~~~----~~~~~~~~G~~ 167 (483)
..++|+++|++++. .++++|++|+|++++++.++.+ ++++||+|+++++.|++. ...++.. |++
T Consensus 69 ~~~~r~~la~~~~~-------~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~-g~~ 140 (406)
T PRK09295 69 MENVRKQAALFINA-------RSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARV-GAE 140 (406)
T ss_pred HHHHHHHHHHHcCc-------CCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHc-CcE
Confidence 46888999998862 1578999999999999999876 468999999999888643 3344444 999
Q ss_pred EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccC
Q 011570 168 LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFT 247 (483)
Q Consensus 168 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~ 247 (483)
++.++++. ++.+|+++|++++.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...
T Consensus 141 v~~v~~~~--~~~~d~~~l~~~i~~------~t~lv~l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g--- 206 (406)
T PRK09295 141 LRVIPLNP--DGTLQLETLPALFDE------RTRLLAITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVM--- 206 (406)
T ss_pred EEEEecCC--CCCCCHHHHHHhcCC------CcEEEEEecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccC---
Confidence 99999864 456899999998853 7899999999999999999 777888899999999999999642
Q ss_pred CCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh----------------------h
Q 011570 248 KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM----------------------S 305 (483)
Q Consensus 248 ~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~----------------------~ 305 (483)
. .+ .++.. .+..+++.|++|.+|.+| +||++++++ +.+.+... .
T Consensus 207 ~-~~-~~~~~---------~~~D~~~~s~~K~~gp~G--~G~l~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 272 (406)
T PRK09295 207 H-HP-VDVQA---------LDCDFYVFSGHKLYGPTG--IGILYVKEA-LLQEMPPWEGGGSMIATVSLTEGTTWAKAPW 272 (406)
T ss_pred c-cc-cCchh---------cCCCEEEeehhhccCCCC--cEEEEEchH-hHhhCCCcccCCceeeeeecCCccccCCchh
Confidence 2 11 22222 234577899999988666 799999544 33322100 0
Q ss_pred --hcCCCChHHHHHHHHhcCChhHHHH-HHHHHHHHHHHHHHHHHHhhhcC-CceeecCC--ceEEEeeecCchhhccCh
Q 011570 306 --SFGLVSSQTQHLIATMLSDDQFVEK-FIAESAKRIAERHKAFTWGLSQV-GIGCLKSN--AGLFLWMDLHHLLKEQTY 379 (483)
Q Consensus 306 --~~~~~s~~~q~~~~~~l~~~~~~~~-~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~--~g~f~~~~l~~~~~~~~~ 379 (483)
..++.+.....++.+++.. +.+ -.+...++.++.++++.+.|.++ |+++..+. .+ .+.+.++.. .
T Consensus 273 r~e~GT~~~~~~~~l~~al~~---~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~-iv~~~~~~~-~---- 343 (406)
T PRK09295 273 RFEAGTPNTGGIIGLGAALDY---VSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLG-VIAFNLGKH-H---- 343 (406)
T ss_pred hcCCCCccHHHHHHHHHHHHH---HHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCce-EEEEEECCc-C----
Confidence 0122344444444444422 111 13445566777778888888877 77776542 44 444555531 1
Q ss_pred HHHHHHHHHHHHhcCeEeeCCCCCCCC------CCCEEEEEecc-CCHHHHHHHHHHHHHHHH
Q 011570 380 EAEMALWRVIINEVKLNVSPGSSFHCP------NPGWFRVCFAN-MDDRTMEIALSRITSFML 435 (483)
Q Consensus 380 ~~~~~~~~~Ll~~~gV~v~pg~~f~~~------~~~~iRis~~~-~~~e~l~~~l~~L~~~l~ 435 (483)
..++... ++++||.++.|..+... .++++|+|++. .++++++.++++|+++..
T Consensus 344 --~~~~~~~-L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 344 --AYDVGSF-LDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred --HHHHHHH-HHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 1244444 56789999998865421 24689999987 599999999999987643
No 140
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.95 E-value=3.3e-25 Score=226.46 Aligned_cols=301 Identities=16% Similarity=0.159 Sum_probs=204.4
Q ss_pred CCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC--CCCeEEEeCCCCcChHHHHhhhcCcEEEE
Q 011570 93 YHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD--PGDAFLVPTPYYPGFDRDLRWRTGVQLVP 170 (483)
Q Consensus 93 ~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~ 170 (483)
.....+|++.+|++++ .++.+++++|+ ++...++..+.. +++.|+.....|......+... |.++..
T Consensus 90 ~~~~~~l~~~la~~~g---------~~~~~~~~sG~-~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~-~~~~~~ 158 (407)
T PRK09064 90 NHYHVELERELADLHG---------KEAALVFTSGY-VSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRS-RCEKHI 158 (407)
T ss_pred HHHHHHHHHHHHHHhC---------CCcEEEECcHH-HHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHc-CCcEEE
Confidence 3346788888888765 34566666664 565666666544 7777777777777666666654 777665
Q ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCC
Q 011570 171 VVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKES 250 (483)
Q Consensus 171 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~ 250 (483)
++. .|++.+++.++.. ...++++|++++|+||+|.+.+ +++|.++|+++|+++|+||+|....|+. .
T Consensus 159 ~~~-------~d~~~le~~l~~~--~~~~~~~v~~~~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~-~ 225 (407)
T PRK09064 159 FRH-------NDVAHLEELLAAA--DPDRPKLIAFESVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGP-R 225 (407)
T ss_pred ECC-------CCHHHHHHHHHhc--cCCCCeEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCC-C
Confidence 553 3678888887632 1136789999999999999998 7888888899999999999997444543 2
Q ss_pred CcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh-hc---CCCChHHHHHHHHhcCChh
Q 011570 251 SFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS-SF---GLVSSQTQHLIATMLSDDQ 326 (483)
Q Consensus 251 ~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~-~~---~~~s~~~q~~~~~~l~~~~ 326 (483)
. ..+..... + ..+.+++++||||+||++| ||+++ ++.+.+.+.... .+ ...++..+.++.+.++
T Consensus 226 g-~g~~~~~~-~---~~~~div~~t~sKa~g~~G---G~~~~-~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~--- 293 (407)
T PRK09064 226 G-GGIAERDG-L---MDRIDIIEGTLAKAFGVMG---GYIAG-SAALVDAVRSYAPGFIFTTSLPPAIAAAALASIR--- 293 (407)
T ss_pred C-CChHHhcC-C---CCCCeEEEEecchhhhccC---ceEec-CHHHHHHHHHhCccccccCcCCHHHHHHHHHHHH---
Confidence 1 22222211 0 1234788999999999888 99998 555666554432 22 1234444444444442
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC
Q 011570 327 FVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP 406 (483)
Q Consensus 327 ~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~ 406 (483)
++++. ...++++.++++++.+.|.+.|+++.++.++ ++++.++.. ....++.+.|++++||.|++...+..+
T Consensus 294 ~~~~~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-iv~i~~~~~------~~~~~l~~~L~~~~gi~v~~~~~p~~~ 365 (407)
T PRK09064 294 HLKES-NEERERHQERAAKLKAALDAAGIPVMPNESH-IVPVMVGDP------EKCKKASDMLLEEHGIYVQPINYPTVP 365 (407)
T ss_pred HHhcC-HHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-EEEEEeCCH------HHHHHHHHHHHHhCCEEEeeECCCCCC
Confidence 22221 2335677888899999999989887766654 667766531 123467888887779999987544332
Q ss_pred -CCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 407 -NPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 407 -~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
+.+++||+++. .+++++++++++|++++++.
T Consensus 366 ~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 366 RGTERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred CCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 34689999976 59999999999999987643
No 141
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.95 E-value=2.3e-25 Score=228.75 Aligned_cols=299 Identities=16% Similarity=0.149 Sum_probs=208.9
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHH----hcCCCCeEEEeCCCCcCh----HHHHhhhcCcE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFC----LADPGDAFLVPTPYYPGF----DRDLRWRTGVQ 167 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~----l~~~gd~Vlv~~P~y~~~----~~~~~~~~G~~ 167 (483)
..++|+.+|++++. -++++|++|+|+++++..++.. .+++||+|+++.+.|++. ...++.. |++
T Consensus 78 ~~~~r~~la~~~~~-------~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~-g~~ 149 (424)
T PLN02855 78 YELARKKVAAFINA-------STSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKT-GAV 149 (424)
T ss_pred HHHHHHHHHHHcCC-------CCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHc-CCE
Confidence 46889999999872 1357999999999999999876 368999999999988753 3334444 999
Q ss_pred EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccC
Q 011570 168 LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFT 247 (483)
Q Consensus 168 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~ 247 (483)
++.++++.+ ..+|++.+++++.+ ++++|++++|+||||.+++ +++|+++|+++|++||+|++|.. .
T Consensus 150 v~~v~~~~~--~~~~~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~---g 215 (424)
T PLN02855 150 LKFVGLTPD--EVLDVEQLKELLSE------KTKLVATHHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSV---P 215 (424)
T ss_pred EEEEecCCC--CCcCHHHHHHHhcc------CceEEEEeCccccccccCC---HHHHHHHHHHcCCEEEEEhhhhc---C
Confidence 999998653 35899999998864 7899999999999999999 67888889999999999999952 2
Q ss_pred CCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh---------------------h
Q 011570 248 KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS---------------------S 306 (483)
Q Consensus 248 ~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~---------------------~ 306 (483)
. .+ .++.. .+..+++.|++|.+|.+| +||++++++ +.+.+.... .
T Consensus 216 ~-~~-~~~~~---------~~~d~~~~s~~K~~gp~G--~G~l~~~~~-~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r 281 (424)
T PLN02855 216 H-MP-VDVQT---------LGADFLVASSHKMCGPTG--IGFLWGKSD-LLESMPPFLGGGEMISDVFLDHSTYAPPPSR 281 (424)
T ss_pred C-cC-CCchh---------cCCCEEEeecccccCCCc--cEEEEEchh-hhhcCCCEecCCCceeeeecCccccCCChhh
Confidence 2 21 22222 234577899999887556 899999544 333221110 0
Q ss_pred c--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCC------ceEEEeeecCchhhcc
Q 011570 307 F--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSN------AGLFLWMDLHHLLKEQ 377 (483)
Q Consensus 307 ~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~------~g~f~~~~l~~~~~~~ 377 (483)
+ ++.+.....++..++... .+...++.+++..+.++++.+.|.++ |++++.+. .+.++.+.++.. .
T Consensus 282 ~e~GT~~~~~~~~l~~al~~~--~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~-~-- 356 (424)
T PLN02855 282 FEAGTPAIGEAIGLGAAIDYL--SEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGI-H-- 356 (424)
T ss_pred ccCCChHHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCc-C--
Confidence 1 112222333333443211 01124555667777788888888877 78777432 123666777631 1
Q ss_pred ChHHHHHHHHHHHHhcCeEeeCCCCCCC------CCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 378 TYEAEMALWRVIINEVKLNVSPGSSFHC------PNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 378 ~~~~~~~~~~~Ll~~~gV~v~pg~~f~~------~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
..++...|.+++||.++.|..+.. ..++++|+|++. .++++++.+++.|+++++..+.
T Consensus 357 ----~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~~ 421 (424)
T PLN02855 357 ----PTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFFSS 421 (424)
T ss_pred ----HHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 225666666556999998875532 124689999976 5999999999999999887644
No 142
>PRK07179 hypothetical protein; Provisional
Probab=99.95 E-value=2e-24 Score=220.62 Aligned_cols=295 Identities=16% Similarity=0.151 Sum_probs=202.2
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecC
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCD 174 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~ 174 (483)
...+|++.+|++++ .+.+++++|+++++..++.++..+||.|+++.+.|..+...+... |+++++++.
T Consensus 100 ~~~~le~~la~~~g----------~~~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~-g~~~~~~~~- 167 (407)
T PRK07179 100 PKPQFEKKLAAFTG----------FESCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAA-GAQAHPFRH- 167 (407)
T ss_pred HHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHC-CCeEEEecC-
Confidence 35788888888875 246688999999999999999999999999999998887777665 888776542
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcch
Q 011570 175 SSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVS 254 (483)
Q Consensus 175 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s 254 (483)
.|++.|++++++. ++++|++++|+||||.+.+ +++|.++|+++|+++|+||+|....++. .. .+
T Consensus 168 ------~d~~~l~~~l~~~-----~~~lV~v~~v~n~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~-~g-~g 231 (407)
T PRK07179 168 ------NDVDHLRRQIERH-----GPGIIVVDSVYSTTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGP-QG-AG 231 (407)
T ss_pred ------CCHHHHHHHHHhc-----CCeEEEECCCCCCCCcccc---HHHHHHHHHHcCCEEEEECcccccCcCC-CC-Cc
Confidence 4889999988641 4678889999999999999 7788888999999999999997543332 11 12
Q ss_pred HHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh---cCCC-ChHHHHHHHHhcCChhHHHH
Q 011570 255 IAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS---FGLV-SSQTQHLIATMLSDDQFVEK 330 (483)
Q Consensus 255 ~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~---~~~~-s~~~q~~~~~~l~~~~~~~~ 330 (483)
...... + .....+++.|+||++| + |+||+++ ++.+.+.+..... +... ++....++.+++.. + .
T Consensus 232 ~~~~~~-~---~~~vdi~~~S~sK~~g-~--~~G~l~~-~~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~---~-~ 299 (407)
T PRK07179 232 LVAELG-L---TSRVHFITASLAKAFA-G--RAGIITC-PRELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEV---I-E 299 (407)
T ss_pred hHHhcC-C---CCCCCEEEeechHhhh-c--cCeEEEe-CHHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHH---H-h
Confidence 221111 0 1123578899999986 2 6899998 4556555543322 1211 22222222233321 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCC-CCCCC
Q 011570 331 FIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFH-CPNPG 409 (483)
Q Consensus 331 ~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~-~~~~~ 409 (483)
.....+++++++++++.+.|.++|+++. +.+ .++++.++... ....+...|. ++||.+..-.... ....+
T Consensus 300 ~~~~~~~~l~~~~~~l~~~L~~~g~~v~-~~~-~i~~l~~~~~~------~~~~~~~~L~-~~GI~~~~~~~p~~~~~~~ 370 (407)
T PRK07179 300 SADDRRARLHANARFLREGLSELGYNIR-SES-QIIALETGSER------NTEVLRDALE-ERNVFGAVFCAPATPKNRN 370 (407)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHcCCCCC-CCC-CEEEEEeCCHH------HHHHHHHHHH-HCCceEeeecCCCCCCCCc
Confidence 1244567788899999999998888766 343 57777765321 1224445554 5699743211111 11356
Q ss_pred EEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 410 WFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 410 ~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
++||+++. .+++++++++++|++++++..
T Consensus 371 ~lRis~~~~~t~edi~~~~~~l~~~~~~~~ 400 (407)
T PRK07179 371 LIRLSLNADLTASDLDRVLEVCREARDEVD 400 (407)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHHHhhC
Confidence 89999976 599999999999999877653
No 143
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.95 E-value=8e-25 Score=223.17 Aligned_cols=298 Identities=14% Similarity=0.141 Sum_probs=202.8
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC--CCCeEEEeCCCCcChHHHHhhhcCcEEEEee
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD--PGDAFLVPTPYYPGFDRDLRWRTGVQLVPVV 172 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~ 172 (483)
...+|++.+|++++ .++.++ ++++++++..++..+.. +++.|++....|......+... |.++..++
T Consensus 91 ~~~~Le~~la~~~g---------~~~~l~-~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~-g~~~~~~~ 159 (402)
T TIGR01821 91 PHVELEAELADLHG---------KESALV-FTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHS-GAEKFIFR 159 (402)
T ss_pred HHHHHHHHHHHHhC---------CCeEEE-ECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHc-CCeEEEEC
Confidence 35778888888875 234444 45557788888877765 6777777766776666666654 87776554
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
. .|++++++.++... ..++++|++++|+||||.+.+ +++|.++|+++|+++|+||+|....++. ..
T Consensus 160 ~-------~d~~~l~~~l~~~~--~~~~~~v~~e~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~-~g- 225 (402)
T TIGR01821 160 H-------NDVAHLEKLLQSVD--PNRPKIIAFESVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGP-RG- 225 (402)
T ss_pred C-------CCHHHHHHHHHhcc--CCCCeEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCC-CC-
Confidence 2 36778888776321 125789999999999999999 7888888999999999999998444443 11
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh-c---CCCChHHHHHHHHhcCChhHH
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS-F---GLVSSQTQHLIATMLSDDQFV 328 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~-~---~~~s~~~q~~~~~~l~~~~~~ 328 (483)
..+..... . ..+.+++++||||+||++| ||+++ ++.+.+.+..... + ...++..+.++.+.++..
T Consensus 226 ~g~~~~~~-~---~~~~div~~t~sKa~g~~G---G~i~~-~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~--- 294 (402)
T TIGR01821 226 GGIAERDG-L---MHRIDIIEGTLAKAFGVVG---GYIAA-SRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHL--- 294 (402)
T ss_pred Cccchhcc-C---CCCCeEEEEechhhhccCC---ceeec-CHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHh---
Confidence 12111111 0 1134678899999999888 99988 5556666554332 1 224555666665555431
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC-C
Q 011570 329 EKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP-N 407 (483)
Q Consensus 329 ~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~-~ 407 (483)
++. ...++.+.++++++.+.|+++|+++.++.++ ++.+.++.. ....++++.|++++||.+++...+..+ +
T Consensus 295 ~~~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-i~~i~~~~~------~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g 366 (402)
T TIGR01821 295 KES-QDLRRAHQENVKRLKNLLEALGIPVIPNPSH-IVPVIIGDA------ALCKKVSDLLLNKHGIYVQPINYPTVPRG 366 (402)
T ss_pred hcC-HHHHHHHHHHHHHHHHHHHHcCCCcCCCCCC-EEEEEeCCH------HHHHHHHHHHHhcCCEEEEeECCCCCCCC
Confidence 111 3334455677888999999889887777665 566666431 123467888887779999986544332 3
Q ss_pred CCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 408 PGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 408 ~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
..++||++.. .+++++++++++|++++++
T Consensus 367 ~~~lRis~~~~~t~edi~~~~~~l~~~~~~ 396 (402)
T TIGR01821 367 TERLRITPTPAHTDKMIDDLVEALLLVWDR 396 (402)
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 4689999965 5999999999999998764
No 144
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.94 E-value=1e-24 Score=219.84 Aligned_cols=301 Identities=16% Similarity=0.179 Sum_probs=204.1
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChH--HHHhhhcCcEEEEeec
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFD--RDLRWRTGVQLVPVVC 173 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~--~~~~~~~G~~~~~v~~ 173 (483)
..++|+.++++++ .+-+.+.|++|+|+++++..++.++..+||.|+++.++|.+.. ..++.. |++++.++.
T Consensus 39 ~~~~~~~l~~l~~------~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~-g~~~~~i~~ 111 (368)
T PRK13479 39 TASVRAKLVAIAT------GEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAEYL-GIAHVVLDT 111 (368)
T ss_pred HHHHHHHHHHHhC------CCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHHHc-CCcEEEEEC
Confidence 5677777777776 1112356889999999999999999999999999988876542 555654 999999998
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcc
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFV 253 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~ 253 (483)
++ ++.+|++++++++.+ ..++++|++++|+||||...+ +++|.++|+++|+++|+|+++. ++. .+ .
T Consensus 112 ~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~~~livDa~~~---~g~-~~-~ 177 (368)
T PRK13479 112 GE--DEPPDAAEVEAALAA----DPRITHVALVHCETTTGILNP---LDEIAAVAKRHGKRLIVDAMSS---FGA-IP-I 177 (368)
T ss_pred CC--CCCCCHHHHHHHHHh----CCCCcEEEEEcccCccccccC---HHHHHHHHHHcCCEEEEEcccc---cCC-cc-c
Confidence 64 356899999998864 235678999999999999999 6788888899999999996653 443 22 2
Q ss_pred hHHHhhhhccccCCCeEEEEecCcccc-CCCCceEEEEEecChHHHHHHHHhhhc-------------------CCCChH
Q 011570 254 SIAEIIDQDIACNRNLIHIVYSLSKDM-GFPGFRVGIIYSYNDQVVSCARKMSSF-------------------GLVSSQ 313 (483)
Q Consensus 254 s~~~l~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~li~~~~~l~~~~~~~~~~-------------------~~~s~~ 313 (483)
++... +..+++.|++|.+ |.+| +||+++++ .+.+.+...... .+.+.+
T Consensus 178 ~~~~~---------~~d~~v~s~~K~l~g~~G--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 245 (368)
T PRK13479 178 DIAEL---------GIDALISSANKCIEGVPG--FGFVIARR-SELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTH 245 (368)
T ss_pred ccccc---------CceEEEecCccccccCCC--ceEEEECH-HHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHH
Confidence 22222 2336678999975 6677 69999954 444433221100 123444
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC---ceEEEeeecCchhhccChHHHHHHHHHHH
Q 011570 314 TQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN---AGLFLWMDLHHLLKEQTYEAEMALWRVII 390 (483)
Q Consensus 314 ~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~---~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll 390 (483)
.+.++.+++..... ..+.++..+++.++++++.+.|.++|+++..+. .+..+.+.++.... . +..++.+.|.
T Consensus 246 ~~~~l~~al~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~l~~~L~ 320 (368)
T PRK13479 246 VVAAFYQALLELEE-EGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPADPA---Y-DFKEFYERLK 320 (368)
T ss_pred HHHHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCCCC---c-CHHHHHHHHH
Confidence 44444333322100 112455567888899999999999898765332 11122233332100 0 1226677766
Q ss_pred HhcCeEeeCCCCCCCCCCCEEEEEe-ccCCHHHHHHHHHHHHHHHHHhh
Q 011570 391 NEVKLNVSPGSSFHCPNPGWFRVCF-ANMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 391 ~~~gV~v~pg~~f~~~~~~~iRis~-~~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+ +||.|++|..+ ..+++|+++ ++.++++++.++++|++++++..
T Consensus 321 ~-~gi~v~~g~~~---~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 321 E-QGFVIYPGKLT---QVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred H-CCEEEecCCCC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 4 59999998644 246899986 66799999999999999987653
No 145
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.94 E-value=2.4e-25 Score=222.54 Aligned_cols=298 Identities=15% Similarity=0.144 Sum_probs=213.0
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC------------C--CCeEEEeCCCCc
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD------------P--GDAFLVPTPYYP 154 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~------------~--gd~Vlv~~P~y~ 154 (483)
.|+...+..++++++++++.+.+| .+.+++++++|+|+++++..++.++.. + ++.|+++.++|.
T Consensus 29 ~y~~~~~~~~le~~~~~~~~~~~g--~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~ 106 (345)
T cd06450 29 TWDESPAATEMEAEVVNWLAKLFG--LPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHV 106 (345)
T ss_pred ccccCchhHHHHHHHHHHHHHHhC--CCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchh
Confidence 487777889999999999998877 222456899999999999999988742 2 348889999999
Q ss_pred ChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcE
Q 011570 155 GFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIH 234 (483)
Q Consensus 155 ~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~ 234 (483)
.+...+... |.+++.++++++ +.+|++.|++++.+...++.++++|++++|+||||.+.+ +++|+++|+++|++
T Consensus 107 ~~~~~~~~~-g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~ 180 (345)
T cd06450 107 SVEKAAAYL-DVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP---LEEIADLAEKYDLW 180 (345)
T ss_pred HHHHHHHHH-hcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC---HHHHHHHHHHhCCe
Confidence 988888876 999999998754 479999999999875555557888999999999999876 88889999999999
Q ss_pred EEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCChHH
Q 011570 235 LVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQT 314 (483)
Q Consensus 235 iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~ 314 (483)
+++|++|+.+.+.. ...... ... ..+...+..|++|.++ ++.++|+++.+ ...
T Consensus 181 l~vD~a~~~~~~~~-~~~~~~---~~~----~~~~d~~~~s~~K~l~-~p~g~g~~~~~------------------~~~ 233 (345)
T cd06450 181 LHVDAAYGGFLLPF-PEPRHL---DFG----IERVDSISVDPHKYGL-VPLGCSAVLVR------------------ALK 233 (345)
T ss_pred EEEechhhHHHhhC-hhhHHH---hcC----ccccCEEEEchhHhhC-CCcchHHHHHH------------------HHH
Confidence 99999998754322 111111 110 1123345679999775 77788887763 333
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceeec-CCceEEEeeecCchhhccChHHHHHHHHHHHHh
Q 011570 315 QHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLK-SNAGLFLWMDLHHLLKEQTYEAEMALWRVIINE 392 (483)
Q Consensus 315 q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~-~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~ 392 (483)
+.++...+.... +++..+++.+.++++.+.|.++ ++++.. +.++ ++.+.++.... .. ....++.+.|.+
T Consensus 234 ~~~~l~~l~~~g-----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-iv~f~~~~~~~-~~-~~~~~i~~~L~~- 304 (345)
T cd06450 234 LWATLRRFGRDG-----YGEHIDRIVDLAKYLAELIRADPGFELLGEPNLS-LVCFRLKPSVK-LD-ELNYDLSDRLNE- 304 (345)
T ss_pred HHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcee-EEEEEECCcch-hh-HHHHHHHHHHHh-
Confidence 444444444332 4555667777888899999887 677654 4555 55555553100 00 112366777764
Q ss_pred cCeEeeCCCCCCCCCCCEEEEEecc-C-CHHHHHHHHHHHHH
Q 011570 393 VKLNVSPGSSFHCPNPGWFRVCFAN-M-DDRTMEIALSRITS 432 (483)
Q Consensus 393 ~gV~v~pg~~f~~~~~~~iRis~~~-~-~~e~l~~~l~~L~~ 432 (483)
+|+.+.++..+. .++++|++++. . +.++++++++.|++
T Consensus 305 ~g~~~~~~~~~~--~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 305 RGGWHVPATTLG--GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred cCCEEEEeeEEC--CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 466555554443 45689999975 3 89999999999875
No 146
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.94 E-value=4.6e-25 Score=224.73 Aligned_cols=289 Identities=17% Similarity=0.186 Sum_probs=197.1
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh---cCCCCeEEEeCCCCcChHH----HHhhhcCcEE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL---ADPGDAFLVPTPYYPGFDR----DLRWRTGVQL 168 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l---~~~gd~Vlv~~P~y~~~~~----~~~~~~G~~~ 168 (483)
..++|+.++++++ .++++|++++|+++++..++.++ ++|||+|+++.|.|.+... .++.. |+++
T Consensus 62 ~~~l~~~ia~~~~--------~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~-g~~~ 132 (397)
T TIGR01976 62 VDDAREAVADLLN--------ADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERA-GAKV 132 (397)
T ss_pred HHHHHHHHHHHcC--------CCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhc-CCEE
Confidence 3577888888776 45668999999999998887775 6899999999999876543 33444 9999
Q ss_pred EEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCC
Q 011570 169 VPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTK 248 (483)
Q Consensus 169 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~ 248 (483)
+.++++++ ++.+|++.+++++.+ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|+++.. ..
T Consensus 133 ~~~~~~~~-~~~~~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~---~~ 199 (397)
T TIGR01976 133 KWARVDEA-TGELHPDDLASLLSP------RTRLVAVTAASNTLGSIVD---LAAITELVHAAGALVVVDAVHYA---PH 199 (397)
T ss_pred EEEecccc-CCCcCHHHHHHhcCC------CceEEEEeCCCCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc---cc
Confidence 99988653 367899999998853 6899999999999999998 88888889999999999999842 21
Q ss_pred CCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc------------CCCChHH--
Q 011570 249 ESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF------------GLVSSQT-- 314 (483)
Q Consensus 249 ~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~------------~~~s~~~-- 314 (483)
....+..+ +..+++.|++|.+| .|+||+++++ .+.+.+...... ++.+...
T Consensus 200 --~~~~~~~~---------~~d~~~~s~~K~~g---~~~G~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~ 264 (397)
T TIGR01976 200 --GLIDVQAT---------GADFLTCSAYKFFG---PHMGILWGRP-ELLMNLPPYKLTFSYDTGPERFELGTPQYELLA 264 (397)
T ss_pred --cCCCHHHc---------CCCEEEEechhhcC---CceEEEEEcH-HHHhhCCCccccCccCCCcchhcCCCCCHHHHH
Confidence 11232222 34466789999875 4689999954 444333221110 1112122
Q ss_pred -HHHHHHhcCChh---------HHHHHHHHHHHHHHHHHHHHHHhhhcCC-ceeecC-----CceEEEeeecCchhhccC
Q 011570 315 -QHLIATMLSDDQ---------FVEKFIAESAKRIAERHKAFTWGLSQVG-IGCLKS-----NAGLFLWMDLHHLLKEQT 378 (483)
Q Consensus 315 -q~~~~~~l~~~~---------~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~~~~-----~~g~f~~~~l~~~~~~~~ 378 (483)
..++..++.+.+ .+.++.++..++..+.++++.+.|.+++ +++..+ .++ ++.+.++.. +
T Consensus 265 ~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~--- 339 (397)
T TIGR01976 265 GVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVP-TVSFTVHGL-P--- 339 (397)
T ss_pred HHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCc-eEEEEeCCc-C---
Confidence 222222222111 0011245566677778888999998874 887654 343 666666531 1
Q ss_pred hHHHHHHHHHHHHhcCeEeeCCCCCC--------C-CCCCEEEEEecc-CCHHHHHHHHHHH
Q 011570 379 YEAEMALWRVIINEVKLNVSPGSSFH--------C-PNPGWFRVCFAN-MDDRTMEIALSRI 430 (483)
Q Consensus 379 ~~~~~~~~~~Ll~~~gV~v~pg~~f~--------~-~~~~~iRis~~~-~~~e~l~~~l~~L 430 (483)
..++.++|. ++||.++.|..|. . ...+++|||+.. .++++++.++++|
T Consensus 340 ---~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 340 ---PQRVVRRLA-DQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred ---HHHHHHHHH-HCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 225666665 5699999886653 1 134689999966 5899999998764
No 147
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.94 E-value=1.7e-24 Score=217.87 Aligned_cols=295 Identities=16% Similarity=0.202 Sum_probs=206.7
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCC--CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcCh--HHHHhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDP--DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGF--DRDLRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~--~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~--~~~~~~~~G~~~~~v 171 (483)
..++|+.++++++ .++ ++|++|+|+++++..++.++..+||.+++..+++.+. ...++.. |.+++.+
T Consensus 37 ~~~~r~~la~l~~--------~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~-g~~~~~v 107 (363)
T TIGR02326 37 VEQIRQQLLALAT--------AEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYL-GIPHHVV 107 (363)
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHc-CCceEEE
Confidence 3566777777766 344 4799999999999999999999998888776665443 3445554 9999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
++++ +..+|++.+++++.+ ..++++|.+++++||||.+++ +++|.++|+++|+++|+|++++ ++. .+
T Consensus 108 ~~~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~---~g~-~~ 174 (363)
T TIGR02326 108 DTGE--VEPPDVVEVEAILAA----DPAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSS---FGG-IP 174 (363)
T ss_pred eCCC--CCCCCHHHHHHHHhh----CCCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEcccc---ccC-cc
Confidence 9864 446899999998874 235678889999999999999 7899999999999999999876 443 22
Q ss_pred cchHHHhhhhccccCCCeEEEEecCcccc-CCCCceEEEEEecChHHHHHHHH--------------hh-----hcCCCC
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDM-GFPGFRVGIIYSYNDQVVSCARK--------------MS-----SFGLVS 311 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~li~~~~~l~~~~~~--------------~~-----~~~~~s 311 (483)
.++..+ +..+++.|++|.+ |.+| +||++++++.+...... .. ..+..+
T Consensus 175 -~~~~~~---------~~D~~~~s~~K~l~~p~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~ 242 (363)
T TIGR02326 175 -IDIAEL---------HIDYLISSANKCIQGVPG--FGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSP 242 (363)
T ss_pred -cchhhc---------CccEEEecCccccccCCc--ceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCc
Confidence 333322 3447789999987 4455 79999955443321100 00 012345
Q ss_pred hHHHHHHHHhcCChhHHHH-HHHHHHHHHHHHHHHHHHhhhcCCceeecC---CceEEEeeecCchhhccChHHHHHHHH
Q 011570 312 SQTQHLIATMLSDDQFVEK-FIAESAKRIAERHKAFTWGLSQVGIGCLKS---NAGLFLWMDLHHLLKEQTYEAEMALWR 387 (483)
Q Consensus 312 ~~~q~~~~~~l~~~~~~~~-~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~---~~g~f~~~~l~~~~~~~~~~~~~~~~~ 387 (483)
.+.+.++.+++..- ... ..++..++++++++++.+.|+++|++...+ .++..+|+.++.... . +..++.+
T Consensus 243 ~~~~~al~~al~~l--~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~v~~ 316 (363)
T TIGR02326 243 THVVHAFAQALLEL--EKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDPD---Y-RFADFYQ 316 (363)
T ss_pred HHHHHHHHHHHHHH--HHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCCC---C-CHHHHHH
Confidence 55666655444321 111 245567888999999999999888876543 345567787764210 0 1225566
Q ss_pred HHHHhcCeEeeCCCCCCCCCCCEEEEEe-ccCCHHHHHHHHHHHHHHH
Q 011570 388 VIINEVKLNVSPGSSFHCPNPGWFRVCF-ANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 388 ~Ll~~~gV~v~pg~~f~~~~~~~iRis~-~~~~~e~l~~~l~~L~~~l 434 (483)
.|. ++||.+++|..+. .+++||++ +..+.++++.++++|++++
T Consensus 317 ~L~-~~gi~v~~g~~~~---~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 317 RLK-EQGFVIYPGKVSQ---VDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred HHH-HCCEEEECCcCCC---CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 665 5699999997652 46899996 6579999999999998875
No 148
>PLN02242 methionine gamma-lyase
Probab=99.94 E-value=9.2e-25 Score=221.73 Aligned_cols=218 Identities=16% Similarity=0.187 Sum_probs=163.0
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHh----hhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLR----WRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~----~~~G~~~~~v 171 (483)
..+|++.+|++++ .+.+++++|+++++..++.+++++||+|+++.|.|+.+...+. ...|++++.+
T Consensus 78 ~~~LE~~lA~l~g----------~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~ 147 (418)
T PLN02242 78 VLNLGRQMAALEG----------TEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFV 147 (418)
T ss_pred HHHHHHHHHHHhC----------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEc
Confidence 5788888888865 3567899999999999999999999999999999988866552 1138777766
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+. .|++.+++++++ .++++|++++|+||||.+.+ +++|+++|+++|++||+|++|..+.+..
T Consensus 148 d~-------~d~e~l~~~i~~-----~~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~~--- 209 (418)
T PLN02242 148 DI-------TDLEAVKKAVVP-----GKTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLSP--- 209 (418)
T ss_pred CC-------CCHHHHHHhcCc-----CCCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCCH---
Confidence 53 278899888853 14899999999999999987 8888999999999999999997543211
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCce-EEEEEecChHHHHHHHHhhh----cCCCChHHHHHHHHhcCChh
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFR-VGIIYSYNDQVVSCARKMSS----FGLVSSQTQHLIATMLSDDQ 326 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlR-iG~li~~~~~l~~~~~~~~~----~~~~s~~~q~~~~~~l~~~~ 326 (483)
..+ +.+++++||||.++.+|.+ .||++++ +.+.+.+..... ........|.+...++...
T Consensus 210 ----~~~---------g~divv~S~SK~l~g~g~~~gG~iv~~-~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l~- 274 (418)
T PLN02242 210 ----ARL---------GADVVVHSISKFISGGADIIAGAVCGP-AELVNSMMDLHHGALMLLGPTMNPKVAFELSERLP- 274 (418)
T ss_pred ----HHc---------CCcEEEEeCccccCCCCCceEEEEEcC-HHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCCC-
Confidence 111 3458899999999988987 5899984 555555543322 2223444566665555433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecC
Q 011570 327 FVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKS 360 (483)
Q Consensus 327 ~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~ 360 (483)
. +..+.+++.++++++.+.|+++++++..|
T Consensus 275 t----l~~r~~~~~~~a~~la~~L~~~~~~V~yP 304 (418)
T PLN02242 275 H----LSLRMKEHCRRAMEYAKRMKELGLKVIYP 304 (418)
T ss_pred c----HHHHHHHHHHHHHHHHHHHHhCCCEEECC
Confidence 2 34456678899999999999988777644
No 149
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.94 E-value=2.2e-24 Score=218.55 Aligned_cols=307 Identities=15% Similarity=0.166 Sum_probs=206.7
Q ss_pred CCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeec
Q 011570 94 HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 94 ~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~ 173 (483)
....++|+.+|++++ .+++++++|+++++..++.+++++||+|+++.++|......++.. |++++.++.
T Consensus 63 ~~~~~l~~~lA~~~g----------~~~~~~~~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~-G~~~~~v~~ 131 (387)
T PRK09331 63 PPIADFHEDLAEFLG----------MDEARVTHGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERA-GLNVREVPK 131 (387)
T ss_pred hHHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHc-CCEEEEEeC
Confidence 347899999999986 246889999999999999999999999999999988777777765 999999998
Q ss_pred CCCCCcccCHHHHHHHHHHHHh-cCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 174 DSSNDFKVTMEALEAAYEKAQE-SNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~-~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
+.+.++.+|++.+++++++... .++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+. +. -+
T Consensus 132 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~---l~~I~~la~~~g~~livD~a~~~---g~-~~- 203 (387)
T PRK09331 132 TGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD---AKKVAKVAHEYGIPFLLNGAYTV---GR-MP- 203 (387)
T ss_pred ccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCccc---CC-cC-
Confidence 4333678999999999975311 2246899999999999999888 88889999999999999999973 21 11
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh-hhcC------CCChHHHHHHHHhcCCh
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM-SSFG------LVSSQTQHLIATMLSDD 325 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~-~~~~------~~s~~~q~~~~~~l~~~ 325 (483)
.+...+ +..+++.|++|+++ ++.++||++++ +.+.+.+... ..+. ...+..+..+..++..-
T Consensus 204 ~~~~~~---------g~D~~~~s~~K~l~-~~~~~G~l~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal 272 (387)
T PRK09331 204 VDGKKL---------GADFIVGSGHKSMA-ASAPSGVLATT-EEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASF 272 (387)
T ss_pred CCHHHc---------CCCEEEeeCccccc-CCCCEEEEEEC-HHHHhhcccccCCCcccceeeeceecCchHHHHHHHHH
Confidence 222222 34577899999997 66699999995 4444443222 1110 00111111111111111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceeec--CCceEEEeeecCchhhc--cChHHHHHHHHHHHHhcCeEeeCC
Q 011570 326 QFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLK--SNAGLFLWMDLHHLLKE--QTYEAEMALWRVIINEVKLNVSPG 400 (483)
Q Consensus 326 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~--~~~g~f~~~~l~~~~~~--~~~~~~~~~~~~Ll~~~gV~v~pg 400 (483)
+.+.+... ..++..++.+++.+.|.++ |+++.. +....++.++.+..... ........+.+.|. ++||...+.
T Consensus 273 ~~~~~~~~-~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~gI~~~~~ 350 (387)
T PRK09331 273 PHVVERVK-RWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELK-KRGIHGIKP 350 (387)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHH-HcCceEEcc
Confidence 22223332 2344456667889999999 998873 22334666666621110 00011235667775 569974321
Q ss_pred CCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 401 SSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 401 ~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
.....+|++....++++++.++++|++++++.
T Consensus 351 -----~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 351 -----GATKEFKLSTYGLTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred -----CCceEEEEEeccCCHHHHHHHHHHHHHHHHhc
Confidence 12345777774479999999999999887753
No 150
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.94 E-value=8e-25 Score=219.63 Aligned_cols=294 Identities=16% Similarity=0.217 Sum_probs=198.5
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH----Hhhh
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD----LRWR 163 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~ 163 (483)
.+|+.+. ..+|++.+|++.+ . +..++++|+++++..++ .++++||+|+++.|+|+..... ++..
T Consensus 47 ~r~~~pt-~~~le~~la~l~g--------~--~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~ 114 (366)
T PRK08247 47 SRTGNPT-RGVLEQAIADLEG--------G--DQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKW 114 (366)
T ss_pred cCCCCch-HHHHHHHHHHHhC--------C--CcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhcc
Confidence 4555543 6889999999876 2 23477788889999876 5789999999999999875433 3344
Q ss_pred cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 164 TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 164 ~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
|++++.++. .|++.+++++.+ ++++|++++|+||+|. ..++++|+++|+++|+++|+|++|..
T Consensus 115 -G~~v~~vd~-------~d~~~l~~~i~~------~tklv~le~P~NP~~~---~~dl~~I~~la~~~g~~lIvD~t~~~ 177 (366)
T PRK08247 115 -NVRFVYVNT-------ASLKAIEQAITP------NTKAIFIETPTNPLMQ---ETDIAAIAKIAKKHGLLLIVDNTFYT 177 (366)
T ss_pred -CceEEEECC-------CCHHHHHHhccc------CceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCcc
Confidence 999888774 378899988864 7899999999999865 55699999999999999999999954
Q ss_pred CccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC-CCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHH
Q 011570 244 TVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF-PGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIAT 320 (483)
Q Consensus 244 ~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~-~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~ 320 (483)
..+. . ++ .....++++|+||.++- ++++.||++++++.+.+.+...... ..++++.+.++..
T Consensus 178 ~~~~--~---p~----------~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~ 242 (366)
T PRK08247 178 PVLQ--R---PL----------EEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIR 242 (366)
T ss_pred cccc--C---ch----------hcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHh
Confidence 3221 1 11 12456889999999863 3579999998656666555443332 3356667766666
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cce-e-ecCCceEEEeeecCchhhccChHHHH---HHHHHHHHhcC
Q 011570 321 MLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIG-C-LKSNAGLFLWMDLHHLLKEQTYEAEM---ALWRVIINEVK 394 (483)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~-~-~~~~~g~f~~~~l~~~~~~~~~~~~~---~~~~~Ll~~~g 394 (483)
.++. +..+.++.+++++.+.+.|+++ ++. + +++.||+|.| ++........+.+.. .++..|.....
T Consensus 243 ~l~t-------l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~~~~~~~~~~~l~~~~~~~slg~~~s 314 (366)
T PRK08247 243 GMKT-------LALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQDEEWVNPFLKSLKLITFAESLGGVES 314 (366)
T ss_pred ccCc-------HHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECCHHHHHHHHHcCCcceEccCCCCCce
Confidence 5553 2334445688889999999987 665 3 4447888877 664210000000000 11222223345
Q ss_pred eEeeCCCCCCCC-----------CCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 395 LNVSPGSSFHCP-----------NPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 395 V~v~pg~~f~~~-----------~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
+.+.|++.+... .++.+||++|. |+.+.+++.|.+++++
T Consensus 315 l~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl---E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 315 FITYPATQTHADIPEEIRIANGVCNRLLRFSVGI---ENVEDLIADLKQAFKQ 364 (366)
T ss_pred EEECCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 677788655321 24579999984 5577777777777764
No 151
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.94 E-value=2.2e-24 Score=218.53 Aligned_cols=306 Identities=14% Similarity=0.169 Sum_probs=214.1
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-----CC-CCeEEEeCCCCcChHHH---
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-----DP-GDAFLVPTPYYPGFDRD--- 159 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-----~~-gd~Vlv~~P~y~~~~~~--- 159 (483)
.|+. .+...+++++++++... + . .++++|++|+|+++++..++.++. ++ +++|+++.+.|+.+...
T Consensus 35 ~~~~-~~~~~l~~a~~~~~~~~-~--~-~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~ 109 (382)
T TIGR03403 35 QFGT-ATHPAIAEALDKLYKGI-N--A-RDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAF 109 (382)
T ss_pred HHHH-HHHHHHHHHHHHHHHHc-C--c-CCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHH
Confidence 4543 35678999999888632 2 1 267899999999999999998762 45 47899998777665544
Q ss_pred HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcc
Q 011570 160 LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDE 239 (483)
Q Consensus 160 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~De 239 (483)
++. .|++++.+|++++ +.+|++.+++++.+ +++++++++|+||||.+++ +++|.++|+++|+++++|+
T Consensus 110 ~~~-~G~~v~~v~~~~~--g~~d~~~l~~~i~~------~t~lv~~~~~~n~tG~~~~---~~~I~~la~~~g~~~ivD~ 177 (382)
T TIGR03403 110 LES-LGVEVTYLPINEQ--GTITAEQVREAITE------KTALVSVMWANNETGMIFP---IKEIGEICKERGVLFHTDA 177 (382)
T ss_pred HHH-CCCEEEEEecCCC--CCCCHHHHHHhccc------CCeEEEEEcccCCCccccC---HHHHHHHHHHcCCEEEEec
Confidence 334 4999999998753 57899999998864 6789999999999999999 6678888889999999999
Q ss_pred ccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChH-HHHHHH-----HhhhcCCCChH
Q 011570 240 IYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQ-VVSCAR-----KMSSFGLVSSQ 313 (483)
Q Consensus 240 ay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~-l~~~~~-----~~~~~~~~s~~ 313 (483)
++.. .. .+ .++.. ....+++.|++|.+|.+| +|+++..+.. +...+. .....++++.+
T Consensus 178 a~~~---g~-~~-~~~~~---------~~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~ 241 (382)
T TIGR03403 178 VQAI---GK-IP-VDVQK---------AGVDFLSFSAHKFHGPKG--VGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVP 241 (382)
T ss_pred hhhc---CC-Cc-cCccc---------cCCCEEEEcchhhCCCCc--eEEEEECCCCCCCCcccCCCCCCCcccCCcChH
Confidence 9862 22 11 12211 123367789999988778 5888764332 111110 00113556777
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCc---eEEEeeecCchhhccChHHHHHHHHHH
Q 011570 314 TQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNA---GLFLWMDLHHLLKEQTYEAEMALWRVI 389 (483)
Q Consensus 314 ~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~---g~f~~~~l~~~~~~~~~~~~~~~~~~L 389 (483)
.+.++...+.. ..++++...+++++.++++.+.|.++ |+.+..+.. ..++.+.++. .+ ...+...|
T Consensus 242 ~~~al~~al~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~L 311 (382)
T TIGR03403 242 YIVAMGEAMRL---ANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKG-VE------GEAMLWDL 311 (382)
T ss_pred HHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCC-CC------HHHHHHhh
Confidence 77666666642 23345666788888999999999876 788776531 2355566642 11 12455554
Q ss_pred HHhcCeEeeCCCCCCCC-----------------CCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 390 INEVKLNVSPGSSFHCP-----------------NPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 390 l~~~gV~v~pg~~f~~~-----------------~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
.++||.++.|+.|... ..+.+|+|++. .+++++++++++|++++++.+
T Consensus 312 -~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 312 -NKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred -ccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5679999988765311 12579999987 699999999999999887754
No 152
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.94 E-value=4.9e-24 Score=216.84 Aligned_cols=309 Identities=12% Similarity=0.100 Sum_probs=220.4
Q ss_pred CCcHHHHHHHHHHHHhhhCCCCCcCC-CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcCh--HHHHhhhcCcEEEE
Q 011570 94 HGLPEFRNAVAKFMGKVRGNRITFDP-DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGF--DRDLRWRTGVQLVP 170 (483)
Q Consensus 94 ~g~~~Lr~~ia~~~~~~~g~~~~~~~-~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~--~~~~~~~~G~~~~~ 170 (483)
.+..++++.+.+.+.+.+| .++ +.+++++|+++++..++..++++||+|++.++.|... ...++.. |++++.
T Consensus 38 ~~~~~~~~~~~~~l~~~~g----~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~-g~~v~~ 112 (401)
T PLN02409 38 PAFPALTKELLEDVKYIFK----TKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRL-NFDVDV 112 (401)
T ss_pred HHHHHHHHHHHHHHHHHhC----CCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHc-CCceEE
Confidence 3567888888888887766 344 4688899999999999999999999999999988654 3555654 999999
Q ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCC
Q 011570 171 VVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKES 250 (483)
Q Consensus 171 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~ 250 (483)
++.+.+ ..+|++.+++++++. .++++++|++++++||||.+++.+++.++++ |+++|+++|+|++++. .. .
T Consensus 113 v~~~~~--~~~~~~~l~~~l~~~--~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~g~~~vvD~v~s~---g~-~ 183 (401)
T PLN02409 113 VESPWG--QGADLDILKSKLRQD--TNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQHPALLLVDGVSSI---GA-L 183 (401)
T ss_pred EECCCC--CCCCHHHHHHHHhhC--cCCCccEEEEEeecccccccCCHHHHHHHHh-hhccCcEEEEEccccc---CC-c
Confidence 998753 347899999998741 0026899999999999999999766666666 9999999999999862 22 1
Q ss_pred CcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh------------------h--cCCC
Q 011570 251 SFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS------------------S--FGLV 310 (483)
Q Consensus 251 ~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~------------------~--~~~~ 310 (483)
+ .++. ..+..+++.|.+|+++.| .++||++.+++ +.+.+.... . .++.
T Consensus 184 ~-id~~---------~~~~D~~~~s~~K~l~~P-~G~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp 251 (401)
T PLN02409 184 D-FRMD---------EWGVDVALTGSQKALSLP-TGLGIVCASPK-ALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTP 251 (401)
T ss_pred c-cccc---------ccCccEEEEcCccccCcC-CCcceeEECHH-HHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCc
Confidence 1 1211 124447777889998643 37999999544 444332210 0 1123
Q ss_pred ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC----ceEEEeeecCchhhccChHHHHHHH
Q 011570 311 SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN----AGLFLWMDLHHLLKEQTYEAEMALW 386 (483)
Q Consensus 311 s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~----~g~f~~~~l~~~~~~~~~~~~~~~~ 386 (483)
+...+.++..++..- .+.-.++.++++++.++++.+.|++.|+++..+. .+..+++.+|...+. .++.
T Consensus 252 ~~~~~~al~~al~~~--~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p~~~~~------~~l~ 323 (401)
T PLN02409 252 SIQLLYGLRAALDLI--FEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVPEGIDS------AEIV 323 (401)
T ss_pred cHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCCCCCCH------HHHH
Confidence 333444554444321 1223566778888889999999988898876542 223456777754332 2677
Q ss_pred HHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 387 RVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 387 ~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
..+++++||.+.+|..- ...+.|||+... .+++++..++.+|++++.+..
T Consensus 324 ~~l~~~~~i~i~~G~~~--~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 324 KNAWKKYNLSLGLGLNK--VAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred HHHHHhCCEEEEcCCCc--ccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 78888999999998642 245789999955 699999999999999988754
No 153
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=1.6e-24 Score=220.81 Aligned_cols=297 Identities=13% Similarity=0.110 Sum_probs=199.6
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCC-CeEEEeCCCCcChHHHHhhhcCcE
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPG-DAFLVPTPYYPGFDRDLRWRTGVQ 167 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~g-d~Vlv~~P~y~~~~~~~~~~~G~~ 167 (483)
.|+...+ .+|.+.++++++ . .+++++++++|+++++..++..+..+| +.|+..+++|+++........|..
T Consensus 81 ~~~~~~~-~~la~~l~~~~~------~-~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~ 152 (398)
T PRK03244 81 LFATEPQ-IALAERLVELLG------A-PEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQP 152 (398)
T ss_pred ccCCHHH-HHHHHHHHHhCC------C-CCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCc
Confidence 4554332 455555555433 1 135799999999999999998776666 567777889987754433222321
Q ss_pred ------------EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHH-HHHHHHHHhhcCcE
Q 011570 168 ------------LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRET-LKDIVSFINEKNIH 234 (483)
Q Consensus 168 ------------~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~-l~~i~~~a~~~~~~ 234 (483)
++.+|. .|++.+++.+. .++++|+++.++||||.+++.++ +++|.++|++||++
T Consensus 153 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~------~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~l 219 (398)
T PRK03244 153 AKRAPFEPLPGGVEHVPY-------GDVDALAAAVD------DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGAL 219 (398)
T ss_pred ccccCCCCCCCCceEeCC-------CCHHHHHHhhc------CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 222221 27888888774 27889999988999999997655 99999999999999
Q ss_pred EEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH--hhhcCCCCh
Q 011570 235 LVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK--MSSFGLVSS 312 (483)
Q Consensus 235 iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~--~~~~~~~s~ 312 (483)
+|+||+|.++...+ . .... .... ..+++ .||||++| +|+|+||++++ +.+.+.+.. ....+..++
T Consensus 220 lI~DEv~~g~gr~g-~-~~~~-~~~~-----~~pDi---~t~sK~l~-~G~~ig~~~~~-~~~~~~~~~~~~~~t~~~~~ 286 (398)
T PRK03244 220 LVLDEVQTGIGRTG-A-WFAH-QHDG-----VTPDV---VTLAKGLG-GGLPIGACLAF-GPAADLLTPGLHGSTFGGNP 286 (398)
T ss_pred EEEeccccCCcccc-h-HHhh-hhhC-----CCCCE---EEEchhhh-CCcccEEEEEc-HHHHhhccCCCCcCCCCCCH
Confidence 99999998743333 2 1111 1111 11222 38899999 99999999995 446655543 122245788
Q ss_pred HHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcee--ecCCceEEEeeecCchhhccChHHHHHHHHHHH
Q 011570 313 QTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGC--LKSNAGLFLWMDLHHLLKEQTYEAEMALWRVII 390 (483)
Q Consensus 313 ~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~--~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll 390 (483)
+++.++.++|+.-. .....++++++.+++.+.|++++... .....|+++|+.++.. ....+...++
T Consensus 287 ~~~aaa~a~l~~~~-----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~i~~~~~-------~~~~~~~~l~ 354 (398)
T PRK03244 287 VACAAALAVLDTIA-----SEGLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLGIVLTAP-------VAKAVEAAAR 354 (398)
T ss_pred HHHHHHHHHHHHHH-----hccHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEEEEEecc-------HHHHHHHHHH
Confidence 88888888764211 01223445556677888887754421 2234678999998631 1235677776
Q ss_pred HhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 391 NEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 391 ~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+ +||.+.+. ..+.+|++++. .+++++++++++|++++++.+
T Consensus 355 ~-~Gv~~~~~------~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 355 E-AGFLVNAV------APDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred H-CCeEEeec------CCCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 5 69999874 13689999876 699999999999999997643
No 154
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.93 E-value=3.4e-24 Score=218.49 Aligned_cols=327 Identities=16% Similarity=0.147 Sum_probs=216.7
Q ss_pred CCcccccchhhhhcH-HHHHHHHhcCCCCccccccccccccccccCCC-----CCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 46 NGVIQMGLAENLLCH-ELVEDWLMNNPKASICSAEGLNEFKGIAIFQD-----YHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 46 ~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-----~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
.++++++.+++.+++ +.+.+...+. . ....|.+ ..|.+++++++++++.+.+| .+.
T Consensus 20 ~~~~~l~~g~~~~~~p~~~~~~~~~~--~------------~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g----~~~ 81 (398)
T cd00613 20 QSMSFLGSGTYKHNPPAVIKRNILEN--E------------FYTAYTPYQPEISQGRLQALFELQTMLCELTG----MDV 81 (398)
T ss_pred cCcccccccccCCcCcHHHHHHhccc--c------------CcccCCCCChhhhhhHHHHHHHHHHHHHHHHC----CCc
Confidence 345888988877764 4444444332 0 1123544 67899999999999998877 455
Q ss_pred CcEEEeCC-hhHHHHHHHHHhcCC--CCeEEEeCCCCcChHHHHhhhcC----cEEEEeecCCCCCcccCHHHHHHHHHH
Q 011570 120 DRIVMSGG-ATGAHETVAFCLADP--GDAFLVPTPYYPGFDRDLRWRTG----VQLVPVVCDSSNDFKVTMEALEAAYEK 192 (483)
Q Consensus 120 ~~i~it~G-~~~al~~~~~~l~~~--gd~Vlv~~P~y~~~~~~~~~~~G----~~~~~v~~~~~~~~~~d~~~l~~~i~~ 192 (483)
++++++++ ++++...+..+++.+ ||+|++++|.|+.+...+... | .+++.++.++ ++.+|++.+++++.+
T Consensus 82 ~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~-~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~ 158 (398)
T cd00613 82 ANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTR-GEPLGIEVVEVPSDE--GGTVDLEALKEEVSE 158 (398)
T ss_pred cceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHh-cccCCcEEEEeccCC--CCCcCHHHHHHhcCC
Confidence 57777764 445555666666676 999999999999998887765 6 8998888754 357899999988853
Q ss_pred HHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEE
Q 011570 193 AQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHI 272 (483)
Q Consensus 193 ~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~ 272 (483)
++++|++++|+ |||.+. +.+++|.++|+++|+++|+|+++....... ... ..+..++
T Consensus 159 ------~t~~viv~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~~~-----~~~---------~~~~d~~ 215 (398)
T cd00613 159 ------EVAALMVQYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTGLK-----PPG---------EYGADIV 215 (398)
T ss_pred ------CeEEEEEECCC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccCCC-----ChH---------HcCCCEE
Confidence 78999999985 899994 446999999999999999999875321111 111 1245688
Q ss_pred EecCccccCCC----CceEEEEEecChHHHHHHHH------------------------------hhhc-CCCC-hHHHH
Q 011570 273 VYSLSKDMGFP----GFRVGIIYSYNDQVVSCARK------------------------------MSSF-GLVS-SQTQH 316 (483)
Q Consensus 273 ~~S~SK~~g~~----GlRiG~li~~~~~l~~~~~~------------------------------~~~~-~~~s-~~~q~ 316 (483)
+.|+||.+ +| |+|+||++.++ .+.+.+.. .... ...+ ...+.
T Consensus 216 ~~s~~K~~-~p~g~Ggp~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~ 293 (398)
T cd00613 216 VGNLQKTG-VPHGGGGPGAGFFAVKK-ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALM 293 (398)
T ss_pred EeeccccC-CCCCCCCCceeEEEEhh-hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHH
Confidence 89999998 56 79999999954 34333200 0000 1011 12233
Q ss_pred HHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEE--EeeecCchhhccChHHHHHHHHHHHHhcC
Q 011570 317 LIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLF--LWMDLHHLLKEQTYEAEMALWRVIINEVK 394 (483)
Q Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f--~~~~l~~~~~~~~~~~~~~~~~~Ll~~~g 394 (483)
+.+.+.... +...++.+++++++++++.+.|.+++... .+.+.++ ++++++... . ....+++..|++ +|
T Consensus 294 a~~~l~~~~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~v~~~~~~~~---~-~~~~~~~~~L~~-~g 364 (398)
T cd00613 294 AAMYIVYLG---PEGLKEIAERAHLNANYLAKRLKEVGGVL-PFNGPFFHEFVLRLPPLY---G-IRAEDLAKALID-GG 364 (398)
T ss_pred HHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCCeeEEEEEEcCCcc---h-HHHHHHHHhhhh-cC
Confidence 332222111 22346667788899999999998875433 2333333 567766310 0 123467888775 58
Q ss_pred eEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHH
Q 011570 395 LNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRI 430 (483)
Q Consensus 395 V~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L 430 (483)
|.+.... ....+.+|+++.. .++++++++++.|
T Consensus 365 i~~~~~~---~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 365 FHAPTMY---LPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred ccccccc---cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 8764321 1235689999976 5999999998764
No 155
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.93 E-value=2.4e-24 Score=217.62 Aligned_cols=288 Identities=20% Similarity=0.249 Sum_probs=199.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcC-CCcEEEeCChhHHHHHHHHHhcC---CCCeEEEeCCCCcChHH----HHhhhcCcE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFD-PDRIVMSGGATGAHETVAFCLAD---PGDAFLVPTPYYPGFDR----DLRWRTGVQ 167 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~-~~~i~it~G~~~al~~~~~~l~~---~gd~Vlv~~P~y~~~~~----~~~~~~G~~ 167 (483)
..++|+.++++++ .+ +++|++|+|+++++..++.++.. +||+|+++.++|+.... ..+. .|++
T Consensus 45 ~~~~~~~la~~~~--------~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~-~g~~ 115 (373)
T cd06453 45 YEAAREKVARFIN--------APSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAER-TGAK 115 (373)
T ss_pred HHHHHHHHHHHhC--------CCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhh-cCcE
Confidence 5678888888886 34 78999999999999999999987 89999999999987532 2334 4999
Q ss_pred EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccC
Q 011570 168 LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFT 247 (483)
Q Consensus 168 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~ 247 (483)
++.++.++ ++.+|++.+++.+.+ ++++|++++|+||||.+.+ +++|+++|+++|++||+|++|...
T Consensus 116 ~~~v~~~~--~~~~d~~~l~~~l~~------~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~li~D~a~~~~--- 181 (373)
T cd06453 116 LKVVPVDD--DGQLDLEALEKLLTE------RTKLVAVTHVSNVLGTINP---VKEIGEIAHEAGVPVLVDGAQSAG--- 181 (373)
T ss_pred EEEeecCC--CCCcCHHHHHHHhcC------CceEEEEeCcccccCCcCC---HHHHHHHHHHcCCEEEEEhhhhcC---
Confidence 99999864 457999999998864 7899999999999999999 678888888999999999998632
Q ss_pred CCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh---------------------
Q 011570 248 KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS--------------------- 306 (483)
Q Consensus 248 ~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~--------------------- 306 (483)
. .+ .++.. ....+++.|++|.++. .++||++++ +.+.+.+.....
T Consensus 182 ~-~~-~~~~~---------~~~d~~~~s~~K~~~~--~g~g~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 247 (373)
T cd06453 182 H-MP-VDVQD---------LGCDFLAFSGHKMLGP--TGIGVLYGK-EELLEEMPPYGGGGEMIEEVSFEETTYADLPHK 247 (373)
T ss_pred c-ee-eeccc---------cCCCEEEeccccccCC--CCcEEEEEc-hHHhhcCCCeecCCCccccccccccccCCCccc
Confidence 1 11 11111 1234566788999974 568999995 444433322110
Q ss_pred c--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCC--ceEEEeeecCchhhccChHH
Q 011570 307 F--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSN--AGLFLWMDLHHLLKEQTYEA 381 (483)
Q Consensus 307 ~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~--~g~f~~~~l~~~~~~~~~~~ 381 (483)
+ ++.+.....++...+.... +.-.++..++..+.++++.+.|.++ |+++..+. .+.++++.++.. +
T Consensus 248 ~~~~t~~~~~~~al~~al~~l~--~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~------ 318 (373)
T cd06453 248 FEAGTPNIAGAIGLGAAIDYLE--KIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGI-H------ 318 (373)
T ss_pred cCCCCCCHHHHHHHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCc-C------
Confidence 1 1122223333333332110 1113455566677788888989887 67766321 234667777531 1
Q ss_pred HHHHHHHHHHhcCeEeeCCCCCCC------CCCCEEEEEecc-CCHHHHHHHHHHH
Q 011570 382 EMALWRVIINEVKLNVSPGSSFHC------PNPGWFRVCFAN-MDDRTMEIALSRI 430 (483)
Q Consensus 382 ~~~~~~~Ll~~~gV~v~pg~~f~~------~~~~~iRis~~~-~~~e~l~~~l~~L 430 (483)
..++.+.|. ++||.+.+|..+.. ..++++|++++. .++++++++++.|
T Consensus 319 ~~~i~~~l~-~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 319 PHDVATILD-QYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred HHHHHHHHH-HCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 225666665 46999988865431 135789999986 5999999998764
No 156
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.93 E-value=9e-24 Score=216.39 Aligned_cols=346 Identities=15% Similarity=0.103 Sum_probs=213.6
Q ss_pred CCCCcccccchh--hhhc--HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 44 NPNGVIQMGLAE--NLLC--HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 44 ~~~~~i~l~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
....+||+..+. +.++ ++.+.+++.+.. .....|+...+..++...+++.+.+.++ .+.
T Consensus 34 dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~ 96 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGHNHPEVVEALKEQL-------------AKLTHFSLGFFYNEPAVELAELLLALTP----EGL 96 (413)
T ss_pred CCCEEEEcCccHHhhccCCCCHHHHHHHHHHH-------------HhCcCccCcccCCHHHHHHHHHHHHhCC----CCC
Confidence 345678888763 2333 344444443311 1123444433345566666666665544 367
Q ss_pred CcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcC------------cEEEEeecCCC----CCccc
Q 011570 120 DRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTG------------VQLVPVVCDSS----NDFKV 181 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G------------~~~~~v~~~~~----~~~~~ 181 (483)
+++++++|+++++..++.++. .+++.|++.+++|++.........+ .+++.+|.++. ..+..
T Consensus 97 ~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (413)
T cd00610 97 DKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELAD 176 (413)
T ss_pred CEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHH
Confidence 899999999999999998773 6789999999999886554433212 23556665421 12455
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhh
Q 011570 182 TMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIID 260 (483)
Q Consensus 182 d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~ 260 (483)
|++.|++.+.++ ..++++|++...+|++|.++ +.+++++|.++|++||+++|+||+|.++...+ .. .. .....
T Consensus 177 d~~~l~~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g-~~-~~-~~~~~ 250 (413)
T cd00610 177 DLEALEEALEEH---PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTG-KM-FA-FEHFG 250 (413)
T ss_pred HHHHHHHHHhcC---CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc-ch-hh-HhhcC
Confidence 888998888642 12455444443467779876 67789999999999999999999998642222 11 11 11111
Q ss_pred hccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHH--HHhh--hcCCCChHHHHHHHHhcCChhHHHHHHHHHH
Q 011570 261 QDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCA--RKMS--SFGLVSSQTQHLIATMLSDDQFVEKFIAESA 336 (483)
Q Consensus 261 ~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~--~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 336 (483)
.... +.|+||.++ .|+|+||+++ ++.+.+.+ .... ..+..+++++.++.+.++. +.+ ....
T Consensus 251 -----~~~d---~~t~sK~l~-~g~~~g~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~---l~~--~~~~ 315 (413)
T cd00610 251 -----VEPD---IVTLGKGLG-GGLPLGAVLG-REEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEV---LEE--EGLL 315 (413)
T ss_pred -----CCCC---eEEEccccc-CccccEEEEE-cHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHH---HHh--ccHH
Confidence 1112 348999998 5899999998 56666654 2222 1234566777766655532 111 1233
Q ss_pred HHHHHHHHHHHHhhhcC----CceeecCCceEEEeeecCchhhc--cChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCE
Q 011570 337 KRIAERHKAFTWGLSQV----GIGCLKSNAGLFLWMDLHHLLKE--QTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGW 410 (483)
Q Consensus 337 ~~l~~~~~~l~~~L~~~----gi~~~~~~~g~f~~~~l~~~~~~--~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~ 410 (483)
++++++.+++.+.|++. ++.......|.++|+.++..... ........+++.|++ +||.+.|+. .++
T Consensus 316 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gv~v~~~~------~~~ 388 (413)
T cd00610 316 ENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALE-RGLLLRPSG------GNV 388 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHH-CCeEEeecC------CCE
Confidence 44555555565555543 22222234467888888642100 001123467777664 599999874 457
Q ss_pred EEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 411 FRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 411 iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
+|++++. .+++++++++++|++++
T Consensus 389 lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 389 IRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHhC
Confidence 9999876 48999999999998753
No 157
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.93 E-value=2.2e-23 Score=213.68 Aligned_cols=286 Identities=15% Similarity=0.144 Sum_probs=187.6
Q ss_pred cCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH-----HhhhcCcEEEEeecCCCCCcccCHHHHHHHHH
Q 011570 117 FDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD-----LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYE 191 (483)
Q Consensus 117 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~-----~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~ 191 (483)
.+..+|++++| ++++..++.++++|||+|+++.|+|+.+... +.. .|.+++.++++.+ ++.+|+++++++++
T Consensus 86 ~~~~~i~~~sg-t~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~-~~~~d~~~l~~~i~ 162 (416)
T PRK00011 86 AEYANVQPHSG-SQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSG-KLYNVVSYGVDEE-TGLIDYDEVEKLAL 162 (416)
T ss_pred CCceeeecCCc-hHHHHHHHHHhcCCCCEEEEeccccCCcccccccccccc-ceeeEeecCcCcc-cCCcCHHHHHHHHH
Confidence 45556776665 6789999999999999999999999765321 122 2678888887632 47899999999986
Q ss_pred HHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEE
Q 011570 192 KAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIH 271 (483)
Q Consensus 192 ~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi 271 (483)
+ .++++|++++++|| ...+ +++|.++|+++|+++|+|++|....... ...... + . ...+
T Consensus 163 ~-----~~~k~v~~~~~~~~--~~~~---~~~I~~la~~~~~~livD~a~~~g~~~~-g~~~~~--~-------~-~~di 221 (416)
T PRK00011 163 E-----HKPKLIIAGASAYS--RPID---FKRFREIADEVGAYLMVDMAHIAGLVAA-GVHPSP--V-------P-HADV 221 (416)
T ss_pred h-----cCCCEEEECCCcCC--CccC---HHHHHHHHHHcCCEEEEECcchhccccc-CccCCC--C-------C-CCcE
Confidence 4 26788888776654 4445 7888999999999999999985321111 111110 0 1 2246
Q ss_pred EEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCC---hHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHH
Q 011570 272 IVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVS---SQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTW 348 (483)
Q Consensus 272 ~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s---~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~ 348 (483)
++.|+||++ +|.|.||++++++.+.+.++.....+..+ ...+.++...+. ....+.+++..++++++++++.+
T Consensus 222 ~~~S~~K~l--~g~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~--~~~~~~~~~~~~~~~~~~~~l~~ 297 (416)
T PRK00011 222 VTTTTHKTL--RGPRGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFK--EALEPEFKEYAQQVVKNAKALAE 297 (416)
T ss_pred EEecCCcCC--CCCCceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHH--HHHhhhHHHHHHHHHHHHHHHHH
Confidence 789999976 78999999996666776665544332221 112222111211 11223356677788899999999
Q ss_pred hhhcCCceeec-CCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCC-CC---CCCCCEEEEEec-----cC
Q 011570 349 GLSQVGIGCLK-SNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSS-FH---CPNPGWFRVCFA-----NM 418 (483)
Q Consensus 349 ~L~~~gi~~~~-~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~-f~---~~~~~~iRis~~-----~~ 418 (483)
.|.+.|+++.+ ...++++|+.++... . ...++.+.| +++||.+..+.. +. +..+..+|++.. ..
T Consensus 298 ~L~~~g~~~~~~~~~~~~~~i~~~~~~----~-~~~~~~~~L-~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~ 371 (416)
T PRK00011 298 ALAERGFRVVSGGTDNHLVLVDLRSKG----L-TGKEAEAAL-EEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGF 371 (416)
T ss_pred HHHhCCCeeeecCCCCeEEEEeCcccC----C-CHHHHHHHH-HHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCc
Confidence 99988987754 122478999886321 0 112445544 567999974321 11 112456999652 24
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 011570 419 DDRTMEIALSRITSFMLK 436 (483)
Q Consensus 419 ~~e~l~~~l~~L~~~l~~ 436 (483)
++++++.+++.|++++..
T Consensus 372 t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 372 KEAEMKEIAELIADVLDN 389 (416)
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 689999999999998775
No 158
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.93 E-value=9.4e-23 Score=208.09 Aligned_cols=298 Identities=15% Similarity=0.125 Sum_probs=203.0
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC--CCCeEEEeCCCCcChHHHHhhhcCcEEEEeec
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD--PGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~ 173 (483)
+.+|++.+|++++ .+..+++++| ++++..++.++.. +||.|++....|......+... |.+++.++.
T Consensus 92 ~~~le~~la~~~g---------~~~~~~~~SG-~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~-g~~~~~~~~ 160 (406)
T PRK13393 92 HVLLEAELADLHG---------KEAALLFTSG-YVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHS-RAEKRIFRH 160 (406)
T ss_pred HHHHHHHHHHHhC---------CCcEEEeCCc-HHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHc-CCeEEEeCC
Confidence 4667777777764 2334555555 5688888887665 7888777777888777777764 887766653
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcc
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFV 253 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~ 253 (483)
.|++.+++.+.... ..++++|++++++||+|.+.+ +++|.++|+++|+++|+||+|+...++. .. .
T Consensus 161 -------~d~~~l~~~l~~~~--~~~~~~v~~~~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~-~G-~ 226 (406)
T PRK13393 161 -------NDPADLERKLSDLD--PHRPKLVAFESVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGP-RG-G 226 (406)
T ss_pred -------CCHHHHHHHHHhcc--CCCCEEEEEcCCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCC-CC-C
Confidence 36777887775321 125788999999999999999 8888888999999999999997544543 21 2
Q ss_pred hHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh-c---CCCChHHHHHHHHhcCChhHHH
Q 011570 254 SIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS-F---GLVSSQTQHLIATMLSDDQFVE 329 (483)
Q Consensus 254 s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~-~---~~~s~~~q~~~~~~l~~~~~~~ 329 (483)
.+..... . ..+.+|+++||||.+|++| ||+++ ++.+.+.+..... + ...++..+.++.+.++.. +
T Consensus 227 g~~~~~~-~---~~~~~i~~~tlsKa~g~~G---G~~~~-~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~---~ 295 (406)
T PRK13393 227 GIAEREG-L---ADRLTIIEGTLAKAFGVMG---GYITG-SAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHL---K 295 (406)
T ss_pred chhhhcC-C---CCCCeEEEEeCchhhcccC---ceeeC-CHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHH---h
Confidence 2222111 0 1234677899999999888 99988 5566666554332 1 223455566665555421 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC-CC
Q 011570 330 KFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP-NP 408 (483)
Q Consensus 330 ~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~-~~ 408 (483)
+.. ..+.++.++++++.+.|++.|+++.++.++ ++.+.++.. ....++.+.|++++||.++++.....+ +.
T Consensus 296 ~~~-~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-i~~v~~~~~------~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~ 367 (406)
T PRK13393 296 ASS-AERERHQDRVARLRARLDKAGIPHLPNPSH-IVPVMVGDP------VLCKQISDELLDRYGIYVQPINYPTVPRGT 367 (406)
T ss_pred hCH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCCC-eEEEEeCCH------HHHHHHHHHHHHhCCEEEEeECCCCCCCCC
Confidence 111 223556778889999998888877766665 555554321 123467888887679999987644332 34
Q ss_pred CEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 409 GWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 409 ~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
+++||++.. .+++++++++++|++++++.
T Consensus 368 ~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 368 ERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 689999976 59999999999999987654
No 159
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.93 E-value=1.9e-23 Score=212.17 Aligned_cols=295 Identities=15% Similarity=0.125 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh----cCCCC----eEEEeCCCCcChHHHHhhhcCcEEE
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL----ADPGD----AFLVPTPYYPGFDRDLRWRTGVQLV 169 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l----~~~gd----~Vlv~~P~y~~~~~~~~~~~G~~~~ 169 (483)
+....+++.+.+.. ..+++++++|+++++..++.++ ..+|| +|++.+++|+++....... +....
T Consensus 73 ~~~~~la~~l~~~~------~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~-~~~~~ 145 (389)
T PRK01278 73 PEQERLAERLVENS------FADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAA-GGQEK 145 (389)
T ss_pred hHHHHHHHHHHhhC------CCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhc-cCChh
Confidence 33445555554321 2469999999999999998876 45676 8999999999887665543 32211
Q ss_pred Eee-c-CCCCCcc----cCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCc-CCCCHHHHHHHHHHHhhcCcEEEEccccc
Q 011570 170 PVV-C-DSSNDFK----VTMEALEAAYEKAQESNIRIKGVLITNPSNPLG-TFLDRETLKDIVSFINEKNIHLVCDEIYA 242 (483)
Q Consensus 170 ~v~-~-~~~~~~~----~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG-~~~~~~~l~~i~~~a~~~~~~iI~Deay~ 242 (483)
... . ....++. .|++.+++++.+ ++++|+++.++||+| .+++.+.+++|.++|++||+++|+||+|.
T Consensus 146 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~ 219 (389)
T PRK01278 146 YLEGFGPLVPGFDQVPFGDIEALKAAITP------NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC 219 (389)
T ss_pred hcccCCCCCCCceEeCCCCHHHHHHhhCC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 111 0 0011222 588999988853 788888887788998 78899999999999999999999999998
Q ss_pred cCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHH
Q 011570 243 ATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIAT 320 (483)
Q Consensus 243 ~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~ 320 (483)
++.+.+ ..+ ..... . . .++ +.||||.++ +|+|+||++++ +.+.+.+..... .+..++++|.++.+
T Consensus 220 g~g~~g-~~~-~~~~~-~-~---~pd----i~t~sK~l~-~G~~ig~~~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a 286 (389)
T PRK01278 220 GMGRTG-KLF-AHEWA-G-V---TPD----IMAVAKGIG-GGFPLGACLAT-EEAAKGMTPGTHGSTYGGNPLAMAVGNA 286 (389)
T ss_pred CCCcCC-cce-eeccc-C-C---CCC----EEEEehhcc-CCcceEEEEEc-HHHHhccCCCCCCCCCCccHHHHHHHHH
Confidence 754443 221 21111 1 0 122 348999998 99999999994 555554433221 13467888888766
Q ss_pred hcCC---hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEe
Q 011570 321 MLSD---DQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNV 397 (483)
Q Consensus 321 ~l~~---~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v 397 (483)
.++. .++ .++++++.+.++++.+.+.+.+.+. +....+ .|+++|++++. + ..+++..|+++ ||.+
T Consensus 287 ~l~~l~~~~~-~~~~~~~~~~l~~~l~~l~~~~~~~-~~~v~g-~G~~~~i~~~~--~------~~~~~~~l~~~-GV~~ 354 (389)
T PRK01278 287 VLDVILAPGF-LDNVQRMGLYLKQKLEGLVDRFPDV-IEEVRG-KGLLLGLKCVV--P------NRDLVQALRDE-GLLT 354 (389)
T ss_pred HHHHHhhhHH-HHHHHHHHHHHHHHHHHHHhhCCCc-eeeEec-ccEEEEEEEec--C------HHHHHHHHHHC-CeEE
Confidence 5542 222 3445555555555554443322111 222333 56788887753 1 23788888866 9999
Q ss_pred eCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 398 SPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 398 ~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
.|+. .+++||+++. .+++++++++++|++++++
T Consensus 355 ~p~~------~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 355 VGAG------DNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred eecC------CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 9873 4689999864 6999999999999998864
No 160
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.93 E-value=8.5e-23 Score=206.30 Aligned_cols=290 Identities=13% Similarity=0.145 Sum_probs=195.5
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc------CCCCeEEEeCCCCcChHHHHhhhcCcEEEE
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA------DPGDAFLVPTPYYPGFDRDLRWRTGVQLVP 170 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~------~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~ 170 (483)
.++++.+|++++ ++++++++++|+++++..++.++. .+||+|++++++|..+...++.. |++++.
T Consensus 62 ~~~~~~la~~~g--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~-G~~~~~ 132 (373)
T TIGR03812 62 EEVVGSLGNLLH--------LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEML-GLELRY 132 (373)
T ss_pred HHHHHHHHHHhC--------CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHc-CCeEEE
Confidence 445555555554 567789999999999988876654 47799999999999998888876 999999
Q ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC-
Q 011570 171 VVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE- 249 (483)
Q Consensus 171 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~- 249 (483)
++.++ ++.+|++++++++.+ ++..++++.|+||||.+.+ +++|.++|+++|+++|+|++|+.+...-.
T Consensus 133 v~~~~--~~~~d~~~l~~~l~~------~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~~~ 201 (373)
T TIGR03812 133 APLDE--DYTVDVKDVEDLIDD------NTIGIVGIAGTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPFLK 201 (373)
T ss_pred EeeCC--CCCcCHHHHHHHHhh------CcEEEEEECCCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHHHh
Confidence 99864 568999999999865 4445555568999999988 77888888899999999999975421100
Q ss_pred C--CcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcC----------CCChHHHHH
Q 011570 250 S--SFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFG----------LVSSQTQHL 317 (483)
Q Consensus 250 ~--~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~----------~~s~~~q~~ 317 (483)
. ....+ .+. ...-..+..|.+| |++++.|+|+++..++.+.+.+....++. ..+.....+
T Consensus 202 ~~~~~~~~-d~~------~~~~d~~~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~ 273 (373)
T TIGR03812 202 KGYNPPPF-DFS------LPGVQSITIDPHK-MGLSPIPAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAA 273 (373)
T ss_pred cCCCCCCc-ccc------CCCCCEEEECccc-cCCCcCCceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHH
Confidence 0 00000 000 0011233457789 66788899877654555555443222221 112233333
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCce-eecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeE
Q 011570 318 IATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIG-CLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLN 396 (483)
Q Consensus 318 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~-~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~ 396 (483)
+...+.... +...++..+++.+.++++.+.|+++|+. +.++.. .++.++++.. .++.+.|.+ +||.
T Consensus 274 ~~~~l~~l~--~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~v~~~~~~~---------~~v~~~L~~-~gi~ 340 (373)
T TIGR03812 274 TYAVIKYLG--REGYRKIVAECMENTRYLVEELKKIGFEPVIEPVL-NIVAFEVDDP---------EEVRKKLRD-RGWY 340 (373)
T ss_pred HHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCCCc-eEEEEEeCCH---------HHHHHHHHH-CCce
Confidence 334443211 2334566778888899999999988865 444444 4676776531 256666664 5999
Q ss_pred eeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHH
Q 011570 397 VSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITS 432 (483)
Q Consensus 397 v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~ 432 (483)
++++. .++++|++++. .++++++.++++|++
T Consensus 341 v~~~~-----~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 341 VSVTR-----CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred eccCC-----CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 97653 25689999976 599999999999975
No 161
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.93 E-value=3.8e-23 Score=208.68 Aligned_cols=298 Identities=14% Similarity=0.146 Sum_probs=202.7
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC----CCCeEEEeCCCCcChHHHHhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD----PGDAFLVPTPYYPGFDRDLRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~----~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v 171 (483)
..++.+.+.+.+.+..| .+++++++++|+++++..++.++.+ +||+|++.++.|..+...++.. |.+++.+
T Consensus 57 ~~~~~~~~~~~la~~~g----~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~-g~~~~~v 131 (371)
T PRK13520 57 TAKLEEEAVEMLGELLH----LPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADML-GVELRRA 131 (371)
T ss_pred HHHHHHHHHHHHHHHhC----CCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHc-CceEEEe
Confidence 34433444444444433 4566889999999999998877654 5799999999999988888775 9999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
|.++ ++.+|++.|++++.+ +++.|++++++||||.+.+ +++|.++|+++|+++++|++|+.+...-...
T Consensus 132 ~~~~--~~~~d~~~l~~~i~~------~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~g~~livD~a~~~~~~~~~~~ 200 (371)
T PRK13520 132 PLDD--DYRVDVKAVEDLIDD------NTIGIVGIAGTTELGQVDP---IPELSKIALENGIFLHVDAAFGGFVIPFLDD 200 (371)
T ss_pred cCCC--CCcCCHHHHHHHHhh------CCEEEEEEcCCcCCcccCC---HHHHHHHHHHcCCCEEEEecchhHHHHhhcC
Confidence 8764 457899999999975 5677888889999999999 7888888899999999999998643211011
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcC----------CCChHHHHHHHHh
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFG----------LVSSQTQHLIATM 321 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~----------~~s~~~q~~~~~~ 321 (483)
. ...... ......+..|.+| |+++|.++|+++..++.+.+.+....++. +.+.....++...
T Consensus 201 ~-~~~~~~------~~~vd~~~~s~~K-~~~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a 272 (371)
T PRK13520 201 P-PNFDFS------LPGVDSITIDPHK-MGLAPIPAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAV 272 (371)
T ss_pred C-CCcccc------CCCCceEEECCcc-ccCccCCceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHH
Confidence 0 000110 0122334457788 55688999988876665555443222221 1122333334344
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCce-eecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCC
Q 011570 322 LSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIG-CLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPG 400 (483)
Q Consensus 322 l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~-~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg 400 (483)
+..-. ....++..++..++++++.+.|.+.|++ +..+..+ ++.++++. ..++...|.+ +||.+.++
T Consensus 273 l~~l~--~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~v~~~~~~---------~~~v~~~L~~-~gi~v~~~ 339 (371)
T PRK13520 273 MKYLG--REGYRKVVERCMENTRWLAEELKERGFEPVIEPVLN-IVAFDDPN---------PDEVREKLRE-RGWRVSVT 339 (371)
T ss_pred Hhhhc--HhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCCCce-EEEEecCC---------HHHHHHHHHH-CCceeccC
Confidence 43211 1224556677788889999999888987 5555554 66677652 2266677765 59998875
Q ss_pred CCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHH
Q 011570 401 SSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFML 435 (483)
Q Consensus 401 ~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~ 435 (483)
. .++++|++++. .++++++.+++.|+++++
T Consensus 340 ~-----~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 340 R-----CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred C-----CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 3 24679999865 599999999999998764
No 162
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.93 E-value=2.8e-23 Score=210.25 Aligned_cols=294 Identities=17% Similarity=0.212 Sum_probs=202.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc---CCCCeEEEeCCCCcChHHH---HhhhcCcEEE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA---DPGDAFLVPTPYYPGFDRD---LRWRTGVQLV 169 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~---~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~ 169 (483)
..++|+.++++++ +++++|++|+|+++++..++.++. .+||+|++....|+.+... ++. .|.+++
T Consensus 44 ~~~~r~~la~~~g--------~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~-~G~~v~ 114 (379)
T TIGR03402 44 VEEAREQVAKLLG--------AEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEK-QGYKVT 114 (379)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHH-cCCEEE
Confidence 3566777777765 568899999999999999988764 4578999999888766543 333 499999
Q ss_pred EeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC
Q 011570 170 PVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE 249 (483)
Q Consensus 170 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~ 249 (483)
.++.++ ++.+|++.+++++.+ +++++++++++||||.+++ +++|.++|+++|+++++|+++.. +.
T Consensus 115 ~v~~~~--~g~~~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~~~~~---g~- 179 (379)
T TIGR03402 115 YLPVDE--EGRLDLEELRAAITD------DTALVSVMWANNETGTIFP---IEEIGEIAKERGALFHTDAVQAV---GK- 179 (379)
T ss_pred EEccCC--CCcCCHHHHHHhcCC------CcEEEEEEcccCCeeeccc---HHHHHHHHHHcCCEEEEECcccc---cc-
Confidence 998864 347899999998863 7899999999999999999 56788899999999999999963 22
Q ss_pred CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHH-HH-----HHhhhcCCCChHHHHHHHHhcC
Q 011570 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVS-CA-----RKMSSFGLVSSQTQHLIATMLS 323 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~-~~-----~~~~~~~~~s~~~q~~~~~~l~ 323 (483)
.+ .++.. .+..+++.|.+|.+|.+| +|+++..++.... .. ......+..+.+...++.++++
T Consensus 180 ~~-~~~~~---------~~~D~~~~s~~K~~gp~G--~g~l~v~~~~~~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~ 247 (379)
T TIGR03402 180 IP-IDLKE---------MNIDMLSLSGHKLHGPKG--VGALYIRKGTRFRPLLRGGHQERGRRAGTENVPGIVGLGKAAE 247 (379)
T ss_pred cc-cCccc---------CCCCEEEEcHHHcCCCCc--eEEEEECCCCCCCCcccCCccCCCcCCCCccHHHHHHHHHHHH
Confidence 11 22221 133466778889777666 7888775432100 00 0001123334444444444442
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhhc-C-CceeecCC-----ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeE
Q 011570 324 DDQFVEKFIAESAKRIAERHKAFTWGLSQ-V-GIGCLKSN-----AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLN 396 (483)
Q Consensus 324 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~-gi~~~~~~-----~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~ 396 (483)
+..+++++..+++++.++++.+.|.+ + ++.+..+. +...+|++... ..++...| +++||.
T Consensus 248 ---~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l-~~~gI~ 314 (379)
T TIGR03402 248 ---LATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIE---------GEAILLLL-DMEGIC 314 (379)
T ss_pred ---HHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCC---------HHHHHHhh-ccCCEE
Confidence 23344566667778888888888875 4 66665432 23444543321 12555544 567999
Q ss_pred eeCCCCCCCCC-----------------CCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 397 VSPGSSFHCPN-----------------PGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 397 v~pg~~f~~~~-----------------~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+++|..|.... .+.+|+|++. .++++++++++.|++++++.+
T Consensus 315 v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 315 ASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred EEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99998775431 3689999987 699999999999999887754
No 163
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.92 E-value=6.4e-23 Score=206.38 Aligned_cols=218 Identities=19% Similarity=0.185 Sum_probs=156.2
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh---
Q 011570 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR--- 163 (483)
Q Consensus 87 ~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--- 163 (483)
..+|+.+. ..+|++++|++.+ .+++++|+|+++++..++.+++++||+|+++.|+|+.....+...
T Consensus 45 Y~R~~~p~-~~~le~~lA~l~g----------~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~ 113 (382)
T TIGR02080 45 YSRSGNPT-RDLLQQALAELEG----------GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKK 113 (382)
T ss_pred ccCCCCch-HHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhh
Confidence 34565543 5788888988764 368999999999999999999999999999999998765544332
Q ss_pred cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 164 TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 164 ~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
.|.++..++ . .|++.+++++++ ++|+|++++|+||||.+++ +++|+++|+++|++||+|++|..
T Consensus 114 ~~~~v~~~d---~----~d~~~l~~ai~~------~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~ 177 (382)
T TIGR02080 114 GCFRVLFVD---Q----GDEQALRAALAQ------KPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLS 177 (382)
T ss_pred cCeEEEEEC---C----CCHHHHHHhcCc------CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcc
Confidence 134554442 1 378889988864 7899999999999999999 67788888899999999999975
Q ss_pred CccCCCCCcchHHHhhhhccccCCCeEEEEecCccccC-CCCceEEEEEecChHHHHHHHHhhhc-C-CCChHHHHHHHH
Q 011570 244 TVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG-FPGFRVGIIYSYNDQVVSCARKMSSF-G-LVSSQTQHLIAT 320 (483)
Q Consensus 244 ~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~li~~~~~l~~~~~~~~~~-~-~~s~~~q~~~~~ 320 (483)
..+. . ++ .+ ...++++|+||.++ .++++.|++++.++.+.+.+...... + .++++....+..
T Consensus 178 ~~~~--~---pl-~~---------gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr 242 (382)
T TIGR02080 178 PALQ--N---PL-AL---------GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLR 242 (382)
T ss_pred cccC--C---ch-hh---------CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHc
Confidence 4221 1 11 11 22378899999885 57899999988667676666554444 2 345554443322
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 321 MLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
-++ . +..+.++..++...+.+.|+.+
T Consensus 243 ~l~---t----l~~R~~~~~~na~~~a~~L~~~ 268 (382)
T TIGR02080 243 GLR---T----LVARMRLQQRNAQAIVEYLQTQ 268 (382)
T ss_pred ccc---h----HHHHHHHHHHHHHHHHHHHHhC
Confidence 222 2 3333555567777788888776
No 164
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.92 E-value=3.8e-23 Score=209.08 Aligned_cols=296 Identities=16% Similarity=0.184 Sum_probs=202.0
Q ss_pred CCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH----HhhhcCcEEE
Q 011570 94 HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD----LRWRTGVQLV 169 (483)
Q Consensus 94 ~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~~G~~~~ 169 (483)
.+..++|+.++++++. -.+++|++|+|+++++..++.+++++||+|+++.++|+.+... ++. .|.+++
T Consensus 44 ~~~~~~~~~la~~~~~-------~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~-~g~~~~ 115 (376)
T TIGR01977 44 REVEETRQLLAKLFNA-------PSSAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQ-IGVEIT 115 (376)
T ss_pred HHHHHHHHHHHHHhCc-------CCCCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHH-cCcEEE
Confidence 3467889999998862 1345899999999999999999999999999999999876543 333 399999
Q ss_pred EeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC
Q 011570 170 PVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE 249 (483)
Q Consensus 170 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~ 249 (483)
.++.++ ++.+|++.+++++.+ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++++.. .
T Consensus 116 ~v~~~~--~~~~d~~~l~~~~~~------~~~~v~~~~~~n~tG~~~~---~~~i~~l~~~~~~~livD~a~~~g---~- 180 (376)
T TIGR01977 116 IVKCDN--EGLISPERIKRAIKT------NTKLIVVSHASNVTGTILP---IEEIGELAQENGIFFILDAAQTAG---V- 180 (376)
T ss_pred EEecCC--CCCcCHHHHHHhcCC------CCeEEEEECCCCCccccCC---HHHHHHHHHHcCCEEEEEhhhccC---c-
Confidence 998764 457899999998853 7899999999999999999 667888899999999999999732 2
Q ss_pred CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH----h-h-------------hcCCCC
Q 011570 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK----M-S-------------SFGLVS 311 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~----~-~-------------~~~~~s 311 (483)
.+ ..+. .....+++.|++|.++.|. .+|.++..++.....+.. . . ..+..+
T Consensus 181 ~~-~~~~---------~~~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~ 249 (376)
T TIGR01977 181 IP-IDMT---------ELAIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLN 249 (376)
T ss_pred cC-CCch---------hcCCCEEEecccccccCCC-CceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCC
Confidence 11 1211 1234577889999875332 367666644431111000 0 0 012223
Q ss_pred hHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCC----ceEEEeeecCchhhccChHHHHHHH
Q 011570 312 SQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSN----AGLFLWMDLHHLLKEQTYEAEMALW 386 (483)
Q Consensus 312 ~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~----~g~f~~~~l~~~~~~~~~~~~~~~~ 386 (483)
.+...++.+.++. +.+.-.+..+++.++..+++.+.|.+. |+++..+. .+..+++.++.. + ..++.
T Consensus 250 ~~~~~a~~~al~~--~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~------~~~~~ 320 (376)
T TIGR01977 250 TPGIAGLNAGIKF--IEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGI-D------SEEVA 320 (376)
T ss_pred HHHHHHHHHHHHH--HHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCC-C------HHHHH
Confidence 3333333333321 111112445566777778888888865 67766431 234677777532 1 22566
Q ss_pred HHHHHhcCeEeeCCCCCCC--------CCCCEEEEEecc-CCHHHHHHHHHHHHH
Q 011570 387 RVIINEVKLNVSPGSSFHC--------PNPGWFRVCFAN-MDDRTMEIALSRITS 432 (483)
Q Consensus 387 ~~Ll~~~gV~v~pg~~f~~--------~~~~~iRis~~~-~~~e~l~~~l~~L~~ 432 (483)
..|.+++||.+..|..+.. ...+.+|++++. .++++++.++++|++
T Consensus 321 ~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 321 DILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred HHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 7777666999999876542 245789999976 599999999999975
No 165
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.92 E-value=1.6e-22 Score=205.11 Aligned_cols=211 Identities=16% Similarity=0.206 Sum_probs=152.7
Q ss_pred CCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH----hhhcCcEE
Q 011570 93 YHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----RWRTGVQL 168 (483)
Q Consensus 93 ~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----~~~~G~~~ 168 (483)
..+..+|++++|++++ .+++++++|+++++..++.+++++||+|+++.|.|+.+.... +. .|+++
T Consensus 63 ~p~~~~Le~~iA~~~g----------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~-~G~~v 131 (400)
T PRK06234 63 NPTSTEVENKLALLEG----------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTR-YGVEV 131 (400)
T ss_pred CccHHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhh-CCeEE
Confidence 3468999999999986 246788888899999999999999999999999998765543 44 49998
Q ss_pred EEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc--CcEEEEccccccCcc
Q 011570 169 VPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK--NIHLVCDEIYAATVF 246 (483)
Q Consensus 169 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~--~~~iI~Deay~~~~~ 246 (483)
+.++.. |++++++++.+ ++++|++++|+||||.+.+ +++|.++|+++ |+++|+||+|....+
T Consensus 132 ~~vd~~-------d~e~l~~~i~~------~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~ 195 (400)
T PRK06234 132 TFVDTS-------NLEEVRNALKA------NTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYI 195 (400)
T ss_pred EEECCC-------CHHHHHHHhcc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhc
Confidence 888742 78899998864 7899999999999999999 77778888886 999999999976433
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceE-EEEEecChHHHHHHHHh--hh-c-CCCChHHHHHHHHh
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRV-GIIYSYNDQVVSCARKM--SS-F-GLVSSQTQHLIATM 321 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRi-G~li~~~~~l~~~~~~~--~~-~-~~~s~~~q~~~~~~ 321 (483)
.. ++ . .+..+++.|+||.++.+|.|+ ||++++ +.+.+.++.. .. + ..+++.....+..-
T Consensus 196 ~~-----~l-~---------~g~Divv~S~sK~l~g~g~~~gG~v~~~-~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~ 259 (400)
T PRK06234 196 QR-----PL-Q---------LGADVVVHSATKYLNGHGDVIAGFVVGK-EEFINQVKLFGIKDMTGSVIGPFEAFLIIRG 259 (400)
T ss_pred CC-----ch-h---------hCCcEEEeeccccccCCCCceeEEEEec-HHHHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Confidence 21 11 1 134588999999999889775 899985 4555554432 21 2 22444444444344
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 322 LSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 322 l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
++. +..+.++..++...+.+.|+++
T Consensus 260 l~t-------l~~r~~~~~~na~~~a~~L~~~ 284 (400)
T PRK06234 260 MKT-------LQIRMEKHCKNAMKVAKFLESH 284 (400)
T ss_pred cCc-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 433 2233344456666777777765
No 166
>PRK06460 hypothetical protein; Provisional
Probab=99.92 E-value=1.4e-22 Score=203.73 Aligned_cols=211 Identities=19% Similarity=0.201 Sum_probs=146.6
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCc----ChHHHHhhhcCcEEEE
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYP----GFDRDLRWRTGVQLVP 170 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~----~~~~~~~~~~G~~~~~ 170 (483)
...+|++++|++.+ . ...+++++| ++++..++.+++++||+|+++.|.|+ .+...++.. |+++..
T Consensus 46 ~~~~L~~~lA~l~g--------~-~~~v~~~sG-~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~-G~~v~~ 114 (376)
T PRK06460 46 TVLELTKKIVELEN--------A-EMGVAFSSG-MGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNW-GVNVDA 114 (376)
T ss_pred cHHHHHHHHHHHhC--------C-CcEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhh-CcEEEE
Confidence 57899999999986 2 235555554 68999999999999999999987654 344555654 999888
Q ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCC
Q 011570 171 VVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKES 250 (483)
Q Consensus 171 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~ 250 (483)
++.++ .+.+++.+. +++++|++++||||||.+++ +++|+++|+++|++||+||+|... +..
T Consensus 115 ~~~~~-------~~~l~~~~~------~~tklV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~-~~~-- 175 (376)
T PRK06460 115 SNPGS-------DNIIEKAKS------KRYDVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTP-INQ-- 175 (376)
T ss_pred ECCCC-------HHHHHHhcC------CCceEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCcc-ccC--
Confidence 77542 223333322 37899999999999999999 456788888999999999999742 111
Q ss_pred CcchHHHhhhhccccCCCeEEEEecCccccC-CCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHH
Q 011570 251 SFVSIAEIIDQDIACNRNLIHIVYSLSKDMG-FPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVE 329 (483)
Q Consensus 251 ~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~ 329 (483)
.+ + ..+.+++++|+||.++ ..+.|+||+++ ++.+.+.+......+..+... ..+..++...++
T Consensus 176 --~~---l-------~~~~divv~S~sK~l~G~~~~~~G~~~~-~~~l~~~l~~~~~~~g~~~~~-~~a~~~l~~~~~-- 239 (376)
T PRK06460 176 --KP---L-------ELGADIVVHSASKFLAGHNDVIAGLAAG-YGKLLNVIDQMRRTLGTSLDP-HAAYLTLRGIKT-- 239 (376)
T ss_pred --Ch---h-------hcCCCEEEeecceeccCCCCceEEEEec-CHHHHHHHHHHHHhcCCCCCH-HHHHHHHhchhh--
Confidence 11 1 1245688999999985 22478999998 455666665544333232221 233333444333
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 330 KFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 330 ~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
++.+.+++.++++++.+.|+++
T Consensus 240 --l~~r~~~~~~n~~~l~~~L~~~ 261 (376)
T PRK06460 240 --LKIRMDVINRNAEQIAEFLEGH 261 (376)
T ss_pred --HHHHHHHHHHHHHHHHHHHHcC
Confidence 5666777888999999999876
No 167
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.92 E-value=8.5e-22 Score=199.33 Aligned_cols=315 Identities=14% Similarity=0.147 Sum_probs=201.6
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEE
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQL 168 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~ 168 (483)
.|+...++.+|++++|++++ ..+.+++++|.++.+ .++.+++++||.|+++++.|..+...+... +.++
T Consensus 38 ~yg~~~~~~~LE~~lA~~~g---------~e~al~~~sG~~a~~-~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~-~~~~ 106 (392)
T PLN03227 38 FYGTIDAHLELEQCMAEFLG---------TESAILYSDGASTTS-STVAAFAKRGDLLVVDRGVNEALLVGVSLS-RANV 106 (392)
T ss_pred ccCChHHHHHHHHHHHHHhC---------CCcEEEecCcHHHHH-HHHHHhCCCCCEEEEeccccHHHHHHHHHc-CCeE
Confidence 47777788999999999987 347788888877777 666778999999999999999988877654 7777
Q ss_pred EEeecCCCCCcccCHHHHHHHHHHHHh--------cCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccc
Q 011570 169 VPVVCDSSNDFKVTMEALEAAYEKAQE--------SNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEI 240 (483)
Q Consensus 169 ~~v~~~~~~~~~~d~~~l~~~i~~~~~--------~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Dea 240 (483)
+.++.. |++.+++.++.... ..+++++|++.+|.||+|.+.+ +++|.++|++||+++|+||+
T Consensus 107 ~~~~~~-------d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~ 176 (392)
T PLN03227 107 RWFRHN-------DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP---LKELVALKEEFHYRLILDES 176 (392)
T ss_pred EEeCCC-------CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC---HHHHHHHHHHcCCEEEEECc
Confidence 777643 34445444433221 1236788899999999999999 77889999999999999999
Q ss_pred cccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh---hcCC-CChHHHH
Q 011570 241 YAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS---SFGL-VSSQTQH 316 (483)
Q Consensus 241 y~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~---~~~~-~s~~~q~ 316 (483)
|....++. .. ........ .. +..+..+++.|+||.+|.. .|++++ ++.+.+.++... .++. .++..+.
T Consensus 177 ~~~g~~g~-~G-~g~~~~~g-~~-p~~~~Div~~slsk~~g~~---gg~v~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~ 248 (392)
T PLN03227 177 FSFGTLGK-SG-RGSLEHAG-LK-PMVHAEIVTFSLENAFGSV---GGMTVG-SEEVVDHQRLSGSGYCFSASAPPFLAK 248 (392)
T ss_pred ccccccCC-CC-CcHHHHcC-CC-CCCCceEEEeechhhhhcc---CcEEec-CHHHHHHHHHhCcCccccCCCCHHHHH
Confidence 97322332 11 12333211 00 0124478888999987634 488887 455555443322 2322 2344444
Q ss_pred HHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcee----------ecCCceEEEeeecCchhhccCh---HHHH
Q 011570 317 LIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGC----------LKSNAGLFLWMDLHHLLKEQTY---EAEM 383 (483)
Q Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~----------~~~~~g~f~~~~l~~~~~~~~~---~~~~ 383 (483)
++...+.... + .++..++++++.+++.+.|++.+++. .....++++.+.+.+....... ....
T Consensus 249 aa~~al~~~~--~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~ 324 (392)
T PLN03227 249 ADATATAGEL--A--GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILD 324 (392)
T ss_pred HHHHHHHHHh--c--CHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHH
Confidence 4443332210 1 23445667778888888887544321 1112345666777542111100 0112
Q ss_pred HHHHHHHHhcCeEeeCCCC-----CCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 384 ALWRVIINEVKLNVSPGSS-----FHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 384 ~~~~~Ll~~~gV~v~pg~~-----f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
++++.+++ +||.+.+... +..-.+..+|+++.. .++|++++++++|++++++.
T Consensus 325 ~~~~~~~~-~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 325 QIAHHSLS-EGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred HHHHHHHH-CCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 56666664 5998865211 111124679999966 69999999999999998764
No 168
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.92 E-value=7.4e-23 Score=211.57 Aligned_cols=291 Identities=16% Similarity=0.216 Sum_probs=198.9
Q ss_pred HHHHHHHHHHH---HhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-CCCCeEEEeCCCCcChHHHHhhh---cCcEEE
Q 011570 97 PEFRNAVAKFM---GKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-DPGDAFLVPTPYYPGFDRDLRWR---TGVQLV 169 (483)
Q Consensus 97 ~~Lr~~ia~~~---~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~~~~~~~~~~---~G~~~~ 169 (483)
+.++++++++. .+.+| ++++++.+|+|+++++..++.++. .+||+|+++.|.|+.+...+... .|.+++
T Consensus 108 ~g~~~~~~e~~~~la~l~g----~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~ 183 (447)
T PRK00451 108 QGTLQAIFEYQTMICELTG----MDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVV 183 (447)
T ss_pred hHHHHHHHHHHHHHHHHhC----CCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEE
Confidence 44666666443 66666 567799999999999999988874 79999999999999888776541 489999
Q ss_pred EeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEE--ccccccCccC
Q 011570 170 PVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVC--DEIYAATVFT 247 (483)
Q Consensus 170 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~--Deay~~~~~~ 247 (483)
.+++++ + .+|++++++++.+ ++++|++++| ||||.+.+ +++|.++|+++|+++|+ |.+.... +.
T Consensus 184 ~v~~~~--~-~~d~~~l~~~i~~------~t~~v~l~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~-~~ 249 (447)
T PRK00451 184 EVPYED--G-VTDLEALEAAVDD------DTAAVVVQYP-NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGL-LK 249 (447)
T ss_pred EecCCC--C-CCCHHHHHHhcCC------CeEEEEEECC-CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhcc-CC
Confidence 999865 3 7899999998853 7899999999 89999987 88889999999999988 4432211 11
Q ss_pred CCCCcchHHHhhhhccccCCCeEEEEe---cCccccCCCCceEEEEEecChHHHHHH-----------------------
Q 011570 248 KESSFVSIAEIIDQDIACNRNLIHIVY---SLSKDMGFPGFRVGIIYSYNDQVVSCA----------------------- 301 (483)
Q Consensus 248 ~~~~~~s~~~l~~~~~~~~~~~vi~~~---S~SK~~g~~GlRiG~li~~~~~l~~~~----------------------- 301 (483)
... ..+..+++. +|||.+++.|+++||+++++ .+.+.+
T Consensus 250 ------~~~---------~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 313 (447)
T PRK00451 250 ------PPG---------EYGADIVVGEGQPLGIPLSFGGPYLGFFATRK-KLVRQMPGRLVGETVDADGKRGFVLTLQA 313 (447)
T ss_pred ------Ccc---------cCCCCEEEECCCcCCCCCCCCCCCchHHHhhH-HHHhhCCCCEeeeecccCCCeeeEeeccc
Confidence 000 123334444 78888888999999999854 443331
Q ss_pred -----HHhhhcCCCC--hHHH-HHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEe--eec
Q 011570 302 -----RKMSSFGLVS--SQTQ-HLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLW--MDL 370 (483)
Q Consensus 302 -----~~~~~~~~~s--~~~q-~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~--~~l 370 (483)
+........+ ...+ .+++..+... .+..+++..+++.++++++.+.|.++ |+++. .+++|.+ +++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~--~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~~~~~~~v~~ 389 (447)
T PRK00451 314 REQHIRREKATSNICTNQALNALAAAIYMSLL--GPEGLRELAEQNHQKAHYLAERLAEIGGVELF--DGPFFNEFVVRL 389 (447)
T ss_pred cccccccccccccccccHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec--CCCeEEEEEEec
Confidence 0011111111 1222 2222122110 12335777788999999999999988 67775 3445544 454
Q ss_pred CchhhccChHHHHHHHHHHHHhcCeE-eeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 371 HHLLKEQTYEAEMALWRVIINEVKLN-VSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~Ll~~~gV~-v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
+. ...+++++|+++ ||. ..++..|+....+++|+++.. .++++++++++.|++++
T Consensus 390 ~~--------~~~~~~~~L~~~-gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 390 PK--------PAEEVNEALLEK-GILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred CC--------CHHHHHHHHHhc-CCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 31 123788888865 665 345555554445789999975 59999999999998754
No 169
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=3.6e-22 Score=201.02 Aligned_cols=218 Identities=18% Similarity=0.184 Sum_probs=161.0
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh---
Q 011570 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR--- 163 (483)
Q Consensus 87 ~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--- 163 (483)
..+|+++ ....|++++|++.+ .+++++++|+++++..++.++++|||+|+++.|+|+.....+...
T Consensus 46 Y~R~~~p-t~~~L~~~lA~l~g----------~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~ 114 (386)
T PRK08045 46 YSRRGNP-TRDVVQRALAELEG----------GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKR 114 (386)
T ss_pred eeCCCCc-cHHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhh
Confidence 3466655 36889999999865 246999999999999999999999999999999998655443322
Q ss_pred cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 164 TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 164 ~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
.|.++..++ ..|++.+++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|..
T Consensus 115 ~gi~v~~vd-------~~d~e~l~~~l~~------~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~ 178 (386)
T PRK08045 115 GCYRVLFVD-------QGDEQALRAALAE------KPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLS 178 (386)
T ss_pred CCeEEEEeC-------CCCHHHHHHhccc------CCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCc
Confidence 244655543 1578889888753 7899999999999999999 67778888899999999999975
Q ss_pred CccCCCCCcchHHHhhhhccccCCCeEEEEecCccccC-CCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHH
Q 011570 244 TVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG-FPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIAT 320 (483)
Q Consensus 244 ~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~ 320 (483)
.... .++ .+ ...++++|+||.++ .++++.|++++.++.+.+.+...... ...+++.+..+..
T Consensus 179 ~~~~-----~pl-~~---------gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~r 243 (386)
T PRK08045 179 PALQ-----NPL-AL---------GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLR 243 (386)
T ss_pred cccC-----Cch-hh---------CCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 3221 121 12 22378999999985 56788999988666665555433322 3367777777777
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 321 MLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
.++. +..++++..+++..+.+.|+++
T Consensus 244 gl~t-------l~~R~~~~~~na~~la~~L~~~ 269 (386)
T PRK08045 244 GLRT-------LVPRMELAQRNAQAIVKYLQTQ 269 (386)
T ss_pred hhcc-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 7664 4555666777888888888876
No 170
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.91 E-value=4e-22 Score=201.45 Aligned_cols=289 Identities=15% Similarity=0.177 Sum_probs=189.8
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh---c
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR---T 164 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~---~ 164 (483)
.+|+++. ..+|++.+|++++ ..+.|++ ++++.++..++.+++++||+|+++.|.|+.....+... .
T Consensus 56 ~r~~~pt-~~~Le~~lA~l~G---------~~~al~~-~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~ 124 (386)
T PRK06767 56 SRLGNPT-VKLFEERMAVLEG---------GEEALAF-GSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKF 124 (386)
T ss_pred cCCCCcc-hHHHHHHHHHHhC---------CCcEEEE-CCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhc
Confidence 4565543 6899999999976 2344555 45567899999999999999999999998766554332 2
Q ss_pred CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC
Q 011570 165 GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT 244 (483)
Q Consensus 165 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~ 244 (483)
|+++..++. .|++.+++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...
T Consensus 125 gi~~~~~~~-------~d~~~l~~~i~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~ 188 (386)
T PRK06767 125 MITHSFCDM-------ETEADIENKIRP------NTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSP 188 (386)
T ss_pred CeEEEEeCC-------CCHHHHHHhhCc------CceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCccc
Confidence 555544432 378888888753 7899999999999999999 778888888999999999999643
Q ss_pred ccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceE-EEEEecChHHHHHHHHhhh-c-CCCChHHHHHHHHh
Q 011570 245 VFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRV-GIIYSYNDQVVSCARKMSS-F-GLVSSQTQHLIATM 321 (483)
Q Consensus 245 ~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRi-G~li~~~~~l~~~~~~~~~-~-~~~s~~~q~~~~~~ 321 (483)
.+. . ++ . ....+++.|+||.++.+|.|+ ||++++++.+.+....... . ...+++.+.++...
T Consensus 189 ~~~--~---pl-~---------~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~ 253 (386)
T PRK06767 189 YLQ--R---PL-E---------LGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRG 253 (386)
T ss_pred ccC--C---ch-h---------cCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcC
Confidence 222 1 11 1 123477889999998889886 8999865555444333322 2 22455544444333
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Ccee-ec-----------CCceEEEeeecCchhhccChHHHHHHHHH
Q 011570 322 LSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGC-LK-----------SNAGLFLWMDLHHLLKEQTYEAEMALWRV 388 (483)
Q Consensus 322 l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~-~~-----------~~~g~f~~~~l~~~~~~~~~~~~~~~~~~ 388 (483)
+.. +..+.++.+++...+.+.|+++ +++. .. ..|| .+.++++.. .++...|.+.
T Consensus 254 L~t-------l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg-~vsf~l~~~-----~~~~~~f~~~ 320 (386)
T PRK06767 254 LKT-------LAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGG-VISFSIKGG-----KEETQAFIND 320 (386)
T ss_pred CCc-------HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCc-eEEEEEcCC-----HHHHHHHHHh
Confidence 432 2344556678888899999987 6653 32 2234 555666531 1223356665
Q ss_pred HHHhcCeEeeCCCCCCC---------------------CCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 389 IINEVKLNVSPGSSFHC---------------------PNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 389 Ll~~~gV~v~pg~~f~~---------------------~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
|- ..++.+.-|..... -.++.||||+|. |+.+.+++.|.+++.
T Consensus 321 l~-~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~ 384 (386)
T PRK06767 321 LH-FITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL---ESWEDIVSDLEQALK 384 (386)
T ss_pred CC-ccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHh
Confidence 53 45666555532110 014679999984 456777777777665
No 171
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=8e-22 Score=197.97 Aligned_cols=217 Identities=16% Similarity=0.162 Sum_probs=157.5
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhh---hc
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRW---RT 164 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~---~~ 164 (483)
.+|+.+ ....|++++|++.+ .+++++|+|+++++..++.+++++||+|+++.|+|+.....+.. ..
T Consensus 48 ~R~~np-t~~~Le~~lA~leg----------~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~ 116 (388)
T PRK08861 48 TRSGNP-NRGLLEQTLSELES----------GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKG 116 (388)
T ss_pred cCCCCc-hHHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcC
Confidence 345544 36889999999865 48999999999999999999999999999999999864443321 13
Q ss_pred CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC
Q 011570 165 GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT 244 (483)
Q Consensus 165 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~ 244 (483)
|++++.++. .|++.+++++.+ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...
T Consensus 117 gi~v~~vd~-------~d~e~l~~~i~~------~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~ 180 (388)
T PRK08861 117 DFKVQFVDQ-------SDAAALDAALAK------KPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTP 180 (388)
T ss_pred CeEEEEECC-------CCHHHHHHhcCc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcccc
Confidence 677777652 478889888753 7899999999999999999 667788888999999999999754
Q ss_pred ccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC-CCceEEEEEecChHHHHHHHHhhhc-C-CCChHHHHHHHHh
Q 011570 245 VFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF-PGFRVGIIYSYNDQVVSCARKMSSF-G-LVSSQTQHLIATM 321 (483)
Q Consensus 245 ~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~-~GlRiG~li~~~~~l~~~~~~~~~~-~-~~s~~~q~~~~~~ 321 (483)
.+.. +. .+ +..+++.|++|.++- .++..|++++.++.+.+.+...... + .++++....+..-
T Consensus 181 ~~~~--pl----~~---------GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rg 245 (388)
T PRK08861 181 VLQK--PL----EL---------GADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRG 245 (388)
T ss_pred ccCC--Cc----cc---------CCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhc
Confidence 3322 11 11 334788999999864 3578899988666666655544433 2 3455555545444
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 322 LSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 322 l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
++. +.-+.++..++...+.+.|+.+
T Consensus 246 l~T-------l~lR~~~~~~~a~~~a~~L~~~ 270 (388)
T PRK08861 246 IRT-------LGARMRVHEESAQQILAYLQTQ 270 (388)
T ss_pred CCC-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 544 2334445566667778888776
No 172
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.91 E-value=3.5e-22 Score=203.59 Aligned_cols=275 Identities=15% Similarity=0.174 Sum_probs=186.8
Q ss_pred CCcEEEeCChhHHHHHHHHHhc--------CCCCeEEEeCCCCcChHHHHhhhcCc------------EEEEeecCCCCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLA--------DPGDAFLVPTPYYPGFDRDLRWRTGV------------QLVPVVCDSSND 178 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~--------~~gd~Vlv~~P~y~~~~~~~~~~~G~------------~~~~v~~~~~~~ 178 (483)
.+.+++++++++++..++.... ...+.|+..+-+|.+.........|. +++.++.
T Consensus 97 ~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 171 (403)
T PRK05093 97 AERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF----- 171 (403)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-----
Confidence 3699999999999999987641 12356888887776643322111111 1222221
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC--CHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHH
Q 011570 179 FKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL--DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIA 256 (483)
Q Consensus 179 ~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~--~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~ 256 (483)
-|++.+++.+.+ ++++|+++ |.||+|.++ +.+.+++|+++|++||+++|+||+|.++.+.+ . +.+..
T Consensus 172 --~d~~~l~~~l~~------~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g-~-~~~~~ 240 (403)
T PRK05093 172 --NDLAAVKAVIDD------HTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTG-D-LFAYM 240 (403)
T ss_pred --CCHHHHHHHhcC------CeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc-c-chhhh
Confidence 178888887752 67776666 888888775 88999999999999999999999999865554 3 22221
Q ss_pred HhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh-h-hcCCCChHHHHHHHHhcCChhHHHHHHHH
Q 011570 257 EIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM-S-SFGLVSSQTQHLIATMLSDDQFVEKFIAE 334 (483)
Q Consensus 257 ~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~-~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 334 (483)
.... .++ +.||||+++ +|+|+||++++ +.+.+.+... . .....+++.|.++.+.|+.. . ..+
T Consensus 241 ~~~~-----~pd----i~s~sK~l~-~G~rig~vv~~-~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~---~--~~~ 304 (403)
T PRK05093 241 HYGV-----TPD----ILTSAKALG-GGFPIGAMLTT-AEIASHFKVGTHGSTYGGNPLACAVAEAVFDII---N--TPE 304 (403)
T ss_pred hcCC-----CCC----EEEeccccc-CCcceEEEEEc-HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH---h--hcc
Confidence 1110 122 459999999 99999999994 5555554331 1 12346788888887765321 1 123
Q ss_pred HHHHHHHHHHHHHHhhhcCC----ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCE
Q 011570 335 SAKRIAERHKAFTWGLSQVG----IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGW 410 (483)
Q Consensus 335 ~~~~l~~~~~~l~~~L~~~g----i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~ 410 (483)
..+.++++++++.+.|++++ +....+.+|+++|+.++.... ....+++..+++ .||.+.|+ +.++
T Consensus 305 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~----~~~~~~~~~l~~-~Gv~v~~~------g~~~ 373 (403)
T PRK05093 305 VLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYK----GRARDFLNAAAE-EGVMVLVA------GPDV 373 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcch----hHHHHHHHHHHH-CCeEEecC------CCCE
Confidence 34667778888888887753 223445668999999864211 123478888886 49999874 2468
Q ss_pred EEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 411 FRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 411 iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
+|++++. .+++++++++++|++++.+
T Consensus 374 lRl~~~~~~~~~~i~~~~~~l~~~l~~ 400 (403)
T PRK05093 374 LRFAPSLVIEEADIDEGLARFEKAVAK 400 (403)
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 9998776 4999999999999998864
No 173
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.91 E-value=4.5e-22 Score=201.07 Aligned_cols=210 Identities=16% Similarity=0.222 Sum_probs=150.4
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH----HhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD----LRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~~G~~~~~v 171 (483)
..+|++.+|++++ .+++++|+|+++++..++.+++++||+|+++.+.|++.... +... |++++.+
T Consensus 63 ~~~le~~la~l~g----------~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~-G~~v~~v 131 (390)
T PRK08133 63 VTMFQERLAALEG----------AEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARF-GIETTFV 131 (390)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHc-CcEEEEE
Confidence 5688888888865 35789999999999999999999999999999999775543 3444 9999888
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+.+ |++.+++++++ ++++|++++|+||||.+.+ +++|+++|+++|++||+|++|....+. .
T Consensus 132 d~~-------d~~~l~~~i~~------~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~--~- 192 (390)
T PRK08133 132 DLT-------DLDAWRAAVRP------NTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQ--Q- 192 (390)
T ss_pred CCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccC--C-
Confidence 753 67888888753 7899999999999999998 788899999999999999998643221 1
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEE-EEEecChHHHHHHH-HhhhcC-CCChHHHHHHHHhcCChhHH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVG-IIYSYNDQVVSCAR-KMSSFG-LVSSQTQHLIATMLSDDQFV 328 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG-~li~~~~~l~~~~~-~~~~~~-~~s~~~q~~~~~~l~~~~~~ 328 (483)
++ .+ ...+++.|+||.++.+|.++| |++++ +.+.+.+. .....+ .+++..+.. ++...+.
T Consensus 193 --pl-~~---------g~Divv~S~sK~~~g~g~~~GG~vv~~-~~~~~~~~~~~~~~g~~~~~~~a~~---~l~gl~t- 255 (390)
T PRK08133 193 --PL-KL---------GADVVIHSATKYLDGQGRVLGGAVVGS-KELMEEVFGFLRTAGPTLSPFNAWV---FLKGLET- 255 (390)
T ss_pred --ch-hh---------CCcEEEeecceeecCCcceEeEEEEcC-HHHHHHHHHHHHHhCCCCCHHHHHH---HHcccch-
Confidence 11 11 234778999999988899985 56664 44433332 233332 233333322 3332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcC-Cc
Q 011570 329 EKFIAESAKRIAERHKAFTWGLSQV-GI 355 (483)
Q Consensus 329 ~~~~~~~~~~l~~~~~~l~~~L~~~-gi 355 (483)
+..+.++..+++..+.+.|+++ ++
T Consensus 256 ---l~~R~~~~~~~a~~la~~L~~~p~v 280 (390)
T PRK08133 256 ---LSLRMEAHSANALALAEWLEAHPGV 280 (390)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 3444555567778888888876 44
No 174
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=5.1e-22 Score=200.86 Aligned_cols=295 Identities=14% Similarity=0.148 Sum_probs=193.3
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-CCC-CeEEEeCCCCcChHHHHhhhcCcEEE---
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-DPG-DAFLVPTPYYPGFDRDLRWRTGVQLV--- 169 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-~~g-d~Vlv~~P~y~~~~~~~~~~~G~~~~--- 169 (483)
...++++++++++.+..+ .+.+++++++++++..++.... .+| +.|++.+++|++.........+....
T Consensus 68 ~~~~~~~~la~~l~~~~~------~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~ 141 (377)
T PRK02936 68 FTNSLQEEVASLLAENSA------GDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEG 141 (377)
T ss_pred cCCHHHHHHHHHHHhcCC------CCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCcccccc
Confidence 357899999999986432 3589999999999999998542 244 67999999887543222111132110
Q ss_pred EeecCCCCCcc--cCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHHHHHHhhcCcEEEEccccccCcc
Q 011570 170 PVVCDSSNDFK--VTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDIVSFINEKNIHLVCDEIYAATVF 246 (483)
Q Consensus 170 ~v~~~~~~~~~--~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~ 246 (483)
..|+..+..+. -|++.+++.+.+ ++++|++..+++++|.+ .+.+.+++|.++|++||+++|+||+|.++.+
T Consensus 142 ~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~ 215 (377)
T PRK02936 142 FGPLLPGFTHVPFNDIKALKEVMNE------EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGR 215 (377)
T ss_pred CCCCCCCceEeCCCCHHHHHHhccC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 01111100000 168888887753 68888888889999987 5789999999999999999999999987544
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--hcCCCChHHHHHHHHhcCC
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--SFGLVSSQTQHLIATMLSD 324 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--~~~~~s~~~q~~~~~~l~~ 324 (483)
.+ . +.+.... . + .++ + .||||.++ +|+|+||+++ ++.+.+.+.... ..+..++++|.++.++++.
T Consensus 216 ~g-~-~~~~~~~-~-~---~~d-i---~t~sK~l~-~G~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~ 282 (377)
T PRK02936 216 TG-T-LFAYEQF-G-L---DPD-I---VTVAKGLG-NGIPVGAMIG-KKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQV 282 (377)
T ss_pred Cc-h-hhHHHhh-C-C---CCc-E---EEEccccc-CCCccEEEEE-cHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 43 2 2222222 1 0 122 2 37999999 9999999999 466666553322 1234688899888888754
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcC--Cceee--cCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCC
Q 011570 325 DQFVEKFIAESAKRIAERHKAFTWGLSQV--GIGCL--KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPG 400 (483)
Q Consensus 325 ~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--gi~~~--~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg 400 (483)
... ....+.++++.+++.+.|.+. ++... ....|+++|++++.. ...+...+ .++||.+.|+
T Consensus 283 ~~~-----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~--------~~~~~~~l-~~~gv~v~~~ 348 (377)
T PRK02936 283 IKQ-----PSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTEE--------VAPVIEQL-REEGLLVLSA 348 (377)
T ss_pred HHh-----ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecch--------HHHHHHHH-HHCCeEEecC
Confidence 311 122344555566666666542 22211 123468999998742 22455555 4679999874
Q ss_pred CCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 401 SSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 401 ~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
. .+++||++.. .+++++++++++|++++
T Consensus 349 g------~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 349 G------PNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred C------CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 2 4689999733 69999999999998753
No 175
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=2.2e-21 Score=196.39 Aligned_cols=209 Identities=19% Similarity=0.170 Sum_probs=150.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcCh----HHHHhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGF----DRDLRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~----~~~~~~~~G~~~~~v 171 (483)
...|++.+|++.+ .++++++++ +++++.+++.+++++||+|+++.|+|+.. ...+.. .|.+++.+
T Consensus 62 ~~~Le~~lA~l~g---------~~~~v~~~s-G~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~-~g~~v~~v 130 (405)
T PRK08776 62 RDLLGEALAELEG---------GAGGVITAT-GMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKK-GHFALITA 130 (405)
T ss_pred HHHHHHHHHHHhC---------CCceEEEcC-HHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHh-cCcEEEEE
Confidence 4677788887754 234555555 57999999999999999999999999873 333343 38888887
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+. .|++.+++++++ ++|+|++++|+||||.+.+ +++|+++|+++|++||+|++|.....
T Consensus 131 ~~-------~d~~~l~~~i~~------~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~~----- 189 (405)
T PRK08776 131 DL-------TDPRSLADALAQ------SPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPAL----- 189 (405)
T ss_pred CC-------CCHHHHHHhcCc------CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCccccc-----
Confidence 64 368888888753 7899999999999999976 88889999999999999999974211
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCC-CceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP-GFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFV 328 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~-GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~ 328 (483)
+.++ .+ ...+++.|.+|.++.+ ++..|++++.++.+.+.+...... ..++++.+.++..-++
T Consensus 190 ~~pl-~~---------gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~----- 254 (405)
T PRK08776 190 QKPL-EF---------GADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGLR----- 254 (405)
T ss_pred CCcc-cc---------cCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhC-----
Confidence 1121 12 2237788999999755 588999988667676655443322 2345555555543332
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 329 EKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 329 ~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
+++.+.++..++...+.+.|+++
T Consensus 255 --tl~~r~~~~~~na~~la~~L~~~ 277 (405)
T PRK08776 255 --TLDARLRVHQENADAIAALLDGH 277 (405)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHcC
Confidence 24556667778888888888876
No 176
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=1.5e-21 Score=197.47 Aligned_cols=208 Identities=15% Similarity=0.216 Sum_probs=149.2
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH----HhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD----LRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~~G~~~~~v 171 (483)
..+|++.+|++.+ .+..++++++++++..++.+++++||+|+++.|+|+..... +.. .|++++.+
T Consensus 66 ~~~le~~lA~l~g----------~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~-~Gi~v~~v 134 (398)
T PRK08249 66 VQAFEEKVRILEG----------AEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPR-MGVDVTLC 134 (398)
T ss_pred HHHHHHHHHHHhC----------CCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhh-CCeEEEEc
Confidence 5788999999876 24567777778999999999999999999999999875443 334 38887766
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+. .|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+.... . .
T Consensus 135 d~-------~d~e~l~~~i~~------~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~-~-~- 195 (398)
T PRK08249 135 ET-------GDHEQIEAEIAK------GCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPIN-Q-N- 195 (398)
T ss_pred CC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCcccc-C-C-
Confidence 52 578999988864 7899999999999999999 77788889999999999999985422 1 1
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceE-EEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRV-GIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFV 328 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRi-G~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~ 328 (483)
+. .+ ...++++|+||.+|.+|.++ ||+++ ++.+.+.+...... ..+++..+..+..-+..
T Consensus 196 --~l-~~---------~~Divv~S~sK~l~g~~~~~gG~vv~-~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t---- 258 (398)
T PRK08249 196 --PL-AL---------GADLVIHSATKFLSGHADALGGVVCG-SKELMEQVYHYREINGATMDPMSAYLILRGMKT---- 258 (398)
T ss_pred --ch-hh---------CCCEEeccCceecCCCCCceEEEEEC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcch----
Confidence 11 11 22367799999998677776 56665 56666655544433 23444444444333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 329 EKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 329 ~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
+..+.++..+++..+.+.|+++
T Consensus 259 ---L~~R~~~~~~na~~la~~L~~~ 280 (398)
T PRK08249 259 ---LKLRVRQQQESAMALAKYLQTH 280 (398)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHcC
Confidence 2344455567777788888875
No 177
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.91 E-value=6.3e-22 Score=198.37 Aligned_cols=283 Identities=15% Similarity=0.200 Sum_probs=189.0
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCC---------------eEEEeCCCCcCh---
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGD---------------AFLVPTPYYPGF--- 156 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd---------------~Vlv~~P~y~~~--- 156 (483)
+.+++++++++++.+.+| .+++++|+|+++++.+++.+++++|| .|+++.|.|..|
T Consensus 42 ~~~~~~~~~~~~~a~~~g------~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~ 115 (363)
T TIGR01437 42 EIKELVNKTGEYIANLLG------VEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAP 115 (363)
T ss_pred CHHHHHHHHHHHHHHhhC------CCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCc
Confidence 457888888888887765 45889999999999999999999998 999999888755
Q ss_pred -HHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE-EeCCCCCCcCCCCHHHHHHHHHHHhhcCcE
Q 011570 157 -DRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL-ITNPSNPLGTFLDRETLKDIVSFINEKNIH 234 (483)
Q Consensus 157 -~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~-l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~ 234 (483)
...+... |++++.++.+ +.+|++++++++.+ ++++++ +++|+||+|.+.+ +++|+++|+++|++
T Consensus 116 ~~~~~~~~-g~~~v~v~~~----~~~d~~~le~ai~~------~t~ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~ 181 (363)
T TIGR01437 116 VETMVRLG-GGKVVEAGYA----NECSAEQLEAAITE------KTAAILYIKSHHCVQKSMLS---VEDAAQVAQEHNLP 181 (363)
T ss_pred hHHHHHhc-CCeEEEEcCC----CCCCHHHHHHhcCh------hceEEEEEecCCCCcCCcCC---HHHHHHHHHHcCCe
Confidence 3455554 9999888753 35899999999975 678765 6788999999999 67789999999999
Q ss_pred EEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc----CCC
Q 011570 235 LVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF----GLV 310 (483)
Q Consensus 235 iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~----~~~ 310 (483)
+|+|++|+. .- .+...+ +..+++.|++|.+ .|++.|+++++ +.+.+........ ...
T Consensus 182 vivD~a~~~---~~----~~~~~~---------g~D~~~~S~~K~l--~gp~~G~l~~~-~~~i~~~~~~~~~~~~~~~~ 242 (363)
T TIGR01437 182 LIVDAAAEE---DL----QKYYRL---------GADLVIYSGAKAI--EGPTSGLVLGK-KKYIEWVKLQSKGIGRAMKV 242 (363)
T ss_pred EEEECCCCC---ch----HHHHHc---------CCCEEEEeCCccc--CCCceEEEEEc-HHHHHHHHhccCCCcceecc
Confidence 999999961 11 111122 2346678999976 68889999984 4444443221111 001
Q ss_pred Ch---HHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecC--CceE-----EEeeecCc-hhhccC
Q 011570 311 SS---QTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKS--NAGL-----FLWMDLHH-LLKEQT 378 (483)
Q Consensus 311 s~---~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~--~~g~-----f~~~~l~~-~~~~~~ 378 (483)
.. .+..++...+.+ +..+..+.+.++++.+.+.|.++ |+.+..+ ..+. -+.++... ..
T Consensus 243 ~~~~~~gl~aAl~~~~~------~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~---- 312 (363)
T TIGR01437 243 GKENILGLTAALEQYLS------TGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELGM---- 312 (363)
T ss_pred CHHHHHHHHHHHHHHHc------cCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCCC----
Confidence 11 122222222211 11222333445667788999887 8877632 1111 11122211 11
Q ss_pred hHHHHHHHHHHHHhcC--eEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 379 YEAEMALWRVIINEVK--LNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 379 ~~~~~~~~~~Ll~~~g--V~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
...++.+.|. +++ |.+++ .|. ..+.+|+++...+++|++.++++|+++
T Consensus 313 --~~~~l~~~L~-~~~~~I~~r~--~~~--~~~~~~l~~~~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 313 --TAADVVQALR-QGEPAIYTRG--YKA--NEGIIEIDPRSVTGGQLDIIVERIREI 362 (363)
T ss_pred --CHHHHHHHHh-cCCCCEEEee--eee--cCCeEEEEeecCCHHHHHHHHHHHHHh
Confidence 1236666664 446 66665 232 456799999877899999999999875
No 178
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.91 E-value=1e-21 Score=198.81 Aligned_cols=217 Identities=17% Similarity=0.269 Sum_probs=149.7
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhh---hc
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRW---RT 164 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~---~~ 164 (483)
.+|+.+. ..+|++.+|++++ .+ ..+++++++.++..++.+++++||+|+++.|.|+.+...+.. ..
T Consensus 60 ~r~~~p~-~~~Le~~lA~l~G--------~~--~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~ 128 (398)
T PRK07504 60 SRYSNPT-VDMFEKRMCALEG--------AE--DARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRY 128 (398)
T ss_pred ecCCCch-HHHHHHHHHHHhC--------CC--eeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhc
Confidence 4565543 6899999999876 22 334566778888888888899999999999999876544321 23
Q ss_pred CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC
Q 011570 165 GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT 244 (483)
Q Consensus 165 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~ 244 (483)
|++++.++ .+|++.+++++++ ++|+|++++|+||||.+++ +++|.++|+++|+++|+|++|...
T Consensus 129 G~~v~~vd-------~~d~e~l~~ai~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~ 192 (398)
T PRK07504 129 GIESTLVD-------GLDLDNWEKAVRP------NTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATP 192 (398)
T ss_pred CeEEEEEC-------CCCHHHHHHhcCc------CceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCcccc
Confidence 88888775 2689999998863 7899999999999999999 778888888999999999999753
Q ss_pred ccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEE-EEEecChHHHHHHHH-hhhcC-CCChHHHHHHHHh
Q 011570 245 VFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVG-IIYSYNDQVVSCARK-MSSFG-LVSSQTQHLIATM 321 (483)
Q Consensus 245 ~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG-~li~~~~~l~~~~~~-~~~~~-~~s~~~q~~~~~~ 321 (483)
.+.. + ..+ +..+++.|+||.++.+|.|+| +++++++.+.+.++. ....+ .++++....+..-
T Consensus 193 ~~~~-----~-~~~---------gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~ 257 (398)
T PRK07504 193 LFQK-----P-LEL---------GAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKG 257 (398)
T ss_pred ccCC-----c-hhh---------CCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhc
Confidence 2221 1 112 345788999999988999997 555644444433332 22222 2333333333333
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 322 LSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 322 l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
++. +..+.++..++...+.+.|+++
T Consensus 258 L~t-------l~~R~~~~~~na~~la~~L~~~ 282 (398)
T PRK07504 258 LET-------LPVRVRQQTESAAAIADFLAGH 282 (398)
T ss_pred cch-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 332 2334444456667777778765
No 179
>PRK14012 cysteine desulfurase; Provisional
Probab=99.90 E-value=6.7e-22 Score=201.77 Aligned_cols=294 Identities=19% Similarity=0.220 Sum_probs=197.6
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc----CCCCeEEEeCCCCcChHHHHhhh--cCcEEE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA----DPGDAFLVPTPYYPGFDRDLRWR--TGVQLV 169 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~----~~gd~Vlv~~P~y~~~~~~~~~~--~G~~~~ 169 (483)
..++|+.+|++++ .++++|++|+|+++++.+++.++. ++||.|+++.++|+.+...+... .|.+++
T Consensus 51 ~~~~r~~ia~~~g--------~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~ 122 (404)
T PRK14012 51 VDIARNQIADLIG--------ADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVT 122 (404)
T ss_pred HHHHHHHHHHHcC--------cCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEE
Confidence 5677888888876 567899999999999999887763 78999999999998775544321 399999
Q ss_pred EeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC
Q 011570 170 PVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE 249 (483)
Q Consensus 170 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~ 249 (483)
.++.++ ++.+|++.+++++.+ ++++|++++++||||.+.+ +++|.++|+++|+++|+|++++. +.
T Consensus 123 ~v~~~~--~g~~d~~~l~~~i~~------~t~lv~~~~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~---g~- 187 (404)
T PRK14012 123 YLDPQS--NGIIDLEKLEAAMRD------DTILVSIMHVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQSV---GK- 187 (404)
T ss_pred EEccCC--CCcCCHHHHHHhcCC------CCEEEEEECcCCCccchhh---HHHHHHHHHHcCCEEEEEcchhc---CC-
Confidence 998774 457899999999864 7889999999999999998 77888899999999999999963 22
Q ss_pred CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--------hcCCCChHHHHHHHHh
Q 011570 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--------SFGLVSSQTQHLIATM 321 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--------~~~~~s~~~q~~~~~~ 321 (483)
.+ .++... +..+++.|++|.+| |+ ++|+++++++.......... ..+..+......+.++
T Consensus 188 ~~-~~~~~~---------~~D~~~~s~~K~~g-p~-g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~a 255 (404)
T PRK14012 188 VP-IDLSKL---------KVDLMSFSAHKIYG-PK-GIGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEA 255 (404)
T ss_pred cc-cCcccC---------CCCEEEEehhhccC-CC-ceEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHH
Confidence 11 122111 33456679999887 54 68999886543221111000 0111222222222222
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecC-----CceEEEeeecCchhhccChHHHHHHHHHHHHhcCe
Q 011570 322 LSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKS-----NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKL 395 (483)
Q Consensus 322 l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~-----~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV 395 (483)
+.. .+.......++.++.++++.+.|+++ ++.+... ...+++|+.+... .++...| .++
T Consensus 256 l~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l---~~~ 320 (404)
T PRK14012 256 ARI---AKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVEG---------ESLIMAL---KDL 320 (404)
T ss_pred HHH---HHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcCH---------HHHHHhC---CCe
Confidence 221 12223445566677777888888765 5554321 2234566655321 1333333 378
Q ss_pred EeeCCCCCCCC-----------------CCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 396 NVSPGSSFHCP-----------------NPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 396 ~v~pg~~f~~~-----------------~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
.|..|..|... ..+.||++++. .++++++.+++.|++++++.++
T Consensus 321 ~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~~ 382 (404)
T PRK14012 321 AVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLRE 382 (404)
T ss_pred EEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 88887666432 13679999987 6999999999999998887643
No 180
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.90 E-value=2.2e-21 Score=195.26 Aligned_cols=211 Identities=21% Similarity=0.253 Sum_probs=156.5
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH----hhhcCcEEEE
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----RWRTGVQLVP 170 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----~~~~G~~~~~ 170 (483)
-..+|++.+|++.+ .+..++++++++++..++.+++++||+|+++.++|......+ +. .|+++..
T Consensus 41 ~~~~le~~la~l~g----------~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~-~g~~~~~ 109 (369)
T cd00614 41 TVDALEKKLAALEG----------GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPK-LGIEVTF 109 (369)
T ss_pred hHHHHHHHHHHHHC----------CCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhh-cCeEEEE
Confidence 36788888888865 246677788899999999999999999999999998866443 33 4888888
Q ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCC
Q 011570 171 VVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKES 250 (483)
Q Consensus 171 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~ 250 (483)
++.+ |++.+++++++ ++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|++|+...+..
T Consensus 110 v~~~-------d~~~l~~~i~~------~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~~-- 171 (369)
T cd00614 110 VDPD-------DPEALEAAIKP------ETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQR-- 171 (369)
T ss_pred eCCC-------CHHHHHHhcCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcCC--
Confidence 7643 57888888753 7899999999999999998 7788999999999999999997543211
Q ss_pred CcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHhhh-c-CCCChHHHHHHHHhcCChhH
Q 011570 251 SFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKMSS-F-GLVSSQTQHLIATMLSDDQF 327 (483)
Q Consensus 251 ~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~~~-~-~~~s~~~q~~~~~~l~~~~~ 327 (483)
+ .. ....+++.|+||.+|.+| ++.||++++++.+.+.+..... + +.++++...++...++.
T Consensus 172 ---~-~~---------~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t--- 235 (369)
T cd00614 172 ---P-LE---------LGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKT--- 235 (369)
T ss_pred ---h-hh---------hCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC---
Confidence 1 11 244578899999998665 8999999966466665554433 2 33555555554444433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 011570 328 VEKFIAESAKRIAERHKAFTWGLSQVG 354 (483)
Q Consensus 328 ~~~~~~~~~~~l~~~~~~l~~~L~~~g 354 (483)
+..+.++..++...+.+.|++++
T Consensus 236 ----l~~r~~~~~~na~~la~~L~~~~ 258 (369)
T cd00614 236 ----LPLRMERHSENALKVAEFLEKHP 258 (369)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHcCC
Confidence 23345566777888888888873
No 181
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.90 E-value=3e-21 Score=193.52 Aligned_cols=214 Identities=18% Similarity=0.149 Sum_probs=150.8
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhh---h
Q 011570 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRW---R 163 (483)
Q Consensus 87 ~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~---~ 163 (483)
..+|+.+ ...+|++++|++.. ++.++++++++++..++.+++++||+|+++.|+|+.+...+.. .
T Consensus 45 y~ry~~p-~~~~Le~~lA~l~~-----------~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~ 112 (366)
T PRK07582 45 YGRASNP-TWRALEAALGELEG-----------AEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAP 112 (366)
T ss_pred eECCCCc-cHHHHHHHHHHHcC-----------CCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhc
Confidence 4567654 57999999999851 3445555556799999999999999999999999887665432 1
Q ss_pred cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 164 TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 164 ~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
.|++++.++.++.. + .+. +++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..
T Consensus 113 ~G~~v~~v~~~~~~------~----~~~------~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~ 173 (366)
T PRK07582 113 LGVTVREAPTAGMA------E----AAL------AGADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTAT 173 (366)
T ss_pred CeEEEEEECCCChH------H----Hhc------cCceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCC
Confidence 49999998865321 1 111 27899999999999998887 88889999999999999999963
Q ss_pred CccCCCCCcchHHHhhhhccccCCCeEEEEecCccccC-CCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHH
Q 011570 244 TVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG-FPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIAT 320 (483)
Q Consensus 244 ~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~ 320 (483)
. +.. . ++ ++ ...++++|+||.++ .+|+|+||+++.++.+.+.+...... ...+++....+..
T Consensus 174 ~-~~~-~---p~-~~---------g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r 238 (366)
T PRK07582 174 P-LGQ-R---PL-EL---------GADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHR 238 (366)
T ss_pred c-ccc-C---ch-hc---------CCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHh
Confidence 2 221 1 11 12 22367899999984 46799999998666676666544433 2345566555555
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 321 MLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
.+... ..+.++..++...+.+.|+++
T Consensus 239 ~l~tl-------~~R~~~~~~na~~la~~L~~~ 264 (366)
T PRK07582 239 SLGTL-------GLRFARQCANALAVAELLAGH 264 (366)
T ss_pred ccccH-------HHHHHHHHHHHHHHHHHHHhC
Confidence 55542 333345567777788888876
No 182
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=2.3e-21 Score=194.97 Aligned_cols=293 Identities=20% Similarity=0.255 Sum_probs=209.8
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcC-CCcEEEeCChhHHHHHHHHHh---cCCCCeEEEeCCCCcChHHH----HhhhcCcE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFD-PDRIVMSGGATGAHETVAFCL---ADPGDAFLVPTPYYPGFDRD----LRWRTGVQ 167 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~-~~~i~it~G~~~al~~~~~~l---~~~gd~Vlv~~P~y~~~~~~----~~~~~G~~ 167 (483)
+++.|+.+|++++ .+ .++|++|.|+|++++.+..++ ..+||+|++..-.|+..... .+. .|++
T Consensus 68 ~e~aRe~va~~~~--------a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~-~Ga~ 138 (405)
T COG0520 68 YEAAREAVARFLN--------ADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKR-TGAK 138 (405)
T ss_pred HHHHHHHHHHHhC--------CCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHh-cCcE
Confidence 5788999999987 45 489999999999999999998 69999999999888654433 333 3999
Q ss_pred EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccC
Q 011570 168 LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFT 247 (483)
Q Consensus 168 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~ 247 (483)
++.+|+++ +..++++.++..+.+ +||+|.++.-+|.||.+.+ +++|+++|+++|+++++|.+++.
T Consensus 139 v~~i~~~~--~g~~~~~~~~~~i~~------~Tklvais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~---- 203 (405)
T COG0520 139 VRVIPLDD--DGLLDLDALEKLITP------KTKLVALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAA---- 203 (405)
T ss_pred EEEEecCC--CCCcCHHHHHHhcCC------CceEEEEECccccccccch---HHHHHHHHHHcCCEEEEECcccc----
Confidence 99999884 457899999997763 8999999999999999999 99999999999999999999863
Q ss_pred CCCCcchHHHhhhhccccCCCeEEEEecCcc-ccCCCCceEEEEEecChHHHHHHHHh---------------------h
Q 011570 248 KESSFVSIAEIIDQDIACNRNLIHIVYSLSK-DMGFPGFRVGIIYSYNDQVVSCARKM---------------------S 305 (483)
Q Consensus 248 ~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK-~~g~~GlRiG~li~~~~~l~~~~~~~---------------------~ 305 (483)
+ ....++..+ +..+++.|..| .+|-.| +|.+++.++.+.+..... .
T Consensus 204 ~-h~~idv~~l---------~~Df~afsgHKwl~gP~G--iGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~ 271 (405)
T COG0520 204 G-HLPIDVQEL---------GCDFLAFSGHKWLLGPTG--IGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPL 271 (405)
T ss_pred C-ccCCCchhc---------CCCEEEEcccccccCCCc--eEEEEEchHHHhhcCCcccCCCceeeecccccccccCcch
Confidence 2 222344333 66788899999 565336 899999544443320000 0
Q ss_pred hc--CCCChHHHHHHHHhcCChhHHHHH-HHHHHHHHHHHHHHHHHhhhcC-CceeecCC---ceEEEeeecCchhhccC
Q 011570 306 SF--GLVSSQTQHLIATMLSDDQFVEKF-IAESAKRIAERHKAFTWGLSQV-GIGCLKSN---AGLFLWMDLHHLLKEQT 378 (483)
Q Consensus 306 ~~--~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~---~g~f~~~~l~~~~~~~~ 378 (483)
.+ +..+......+.++++ ++.+. .++..++.++..+++.+.|.++ +++++.+. .+-.+.+.++..
T Consensus 272 rfe~gTpn~~~~i~l~aAl~---~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~----- 343 (405)
T COG0520 272 RFEAGTPNIAGAIGLAAALD---YLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGI----- 343 (405)
T ss_pred hhccCCchHHHHHhHHHHHH---HHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCC-----
Confidence 00 1112122222233332 11211 3455666777788899999988 78887653 344566666642
Q ss_pred hHHHHHHHHHHHHhcCeEeeCCCCCCCC------CCCEEEEEecc-CCHHHHHHHHHHHHHHHH
Q 011570 379 YEAEMALWRVIINEVKLNVSPGSSFHCP------NPGWFRVCFAN-MDDRTMEIALSRITSFML 435 (483)
Q Consensus 379 ~~~~~~~~~~Ll~~~gV~v~pg~~f~~~------~~~~iRis~~~-~~~e~l~~~l~~L~~~l~ 435 (483)
...+++..|-+ .||.++.|..|... -++.+|+|++. .|+|+++.+++.|+++.+
T Consensus 344 --~~~dv~~~L~~-~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 344 --HPHDVATLLDE-KGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred --CHHHHHHHHHh-CCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 12366666664 58999999877532 13459999987 599999999999998764
No 183
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.90 E-value=1.7e-21 Score=198.54 Aligned_cols=293 Identities=17% Similarity=0.211 Sum_probs=200.8
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh----cCCCCeEEEeCCCCcChHHHH---hhhcCcEE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL----ADPGDAFLVPTPYYPGFDRDL---RWRTGVQL 168 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l----~~~gd~Vlv~~P~y~~~~~~~---~~~~G~~~ 168 (483)
..++|+.++++++ +++++|++|+|+++++..++.++ .++||+|+++.+.|+.+...+ +. .|.++
T Consensus 49 ~~~~r~~la~~~g--------~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~-~g~~v 119 (402)
T TIGR02006 49 VENARNQVAELIG--------ADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLER-EGFEV 119 (402)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHh-cCCEE
Confidence 5677888888876 57889999999999999988765 368999999999998766554 33 39999
Q ss_pred EEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCC
Q 011570 169 VPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTK 248 (483)
Q Consensus 169 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~ 248 (483)
+.+++++ ++.+|++.+++++.+ ++++|++++|+||||.+.+ +++|.++|+++|+++++|++++. ..
T Consensus 120 ~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~v~~~~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~---g~ 185 (402)
T TIGR02006 120 TYLPPKS--NGLIDLEELKAAIRD------DTILVSIMHVNNEIGVIQD---IAAIGEICRERKVFFHVDAAQSV---GK 185 (402)
T ss_pred EEEccCC--CCcCCHHHHHHhcCC------CCEEEEEECCCcCceeccc---HHHHHHHHHHcCCEEEEEcchhc---CC
Confidence 9998874 457899999998853 6889999999999999998 77888899999999999999963 22
Q ss_pred CCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh------h--hcCCCChHHHHHHHH
Q 011570 249 ESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM------S--SFGLVSSQTQHLIAT 320 (483)
Q Consensus 249 ~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~------~--~~~~~s~~~q~~~~~ 320 (483)
.+ .++.. ....+++.|.+|.+|.+| +|+++..++......... . ..+..+.....++..
T Consensus 186 -~~-~~~~~---------~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~ 252 (402)
T TIGR02006 186 -IP-INVNE---------LKVDLMSISGHKIYGPKG--IGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGE 252 (402)
T ss_pred -cc-cCccc---------cCCCEEEEehhhhcCCCc--eEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHH
Confidence 11 12211 234467778899887556 898888544322110000 0 113334444444444
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCC-----ceEEEeeecCchhhccChHHHHHHHHHHHHhcC
Q 011570 321 MLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSN-----AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVK 394 (483)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~-----~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~g 394 (483)
.++ ++++..+...+++++.++++.+.|.++ ++.+..+. ..+. +.++. .. ..++...+ .+
T Consensus 253 al~---~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~--v~f~~-~~------~~~~~~~l---~~ 317 (402)
T TIGR02006 253 AFR---IAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLN--VSFNY-VE------GESLIMAL---KD 317 (402)
T ss_pred HHH---HHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEE--EEEeC-cC------HHHHHHhc---CC
Confidence 443 223345666677888889999998876 56554211 1112 22221 11 11333322 48
Q ss_pred eEeeCCCCCCCC-----------------CCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 395 LNVSPGSSFHCP-----------------NPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 395 V~v~pg~~f~~~-----------------~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
|.++.|..|... ..+++|+|++. .|+++++++++.|+++++..+.
T Consensus 318 i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~~ 380 (402)
T TIGR02006 318 LAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLRE 380 (402)
T ss_pred EEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999888776531 13689999987 5999999999999998877643
No 184
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.90 E-value=4.9e-21 Score=189.02 Aligned_cols=302 Identities=19% Similarity=0.202 Sum_probs=214.6
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEE
Q 011570 90 FQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLV 169 (483)
Q Consensus 90 Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~ 169 (483)
++...-+.+|.+.+|+|++ .++.+++++|- .++..++.+|++++|.|+...-.|.+..+.++.. +.+++
T Consensus 80 ~G~~~~h~~LE~~lA~f~g---------~e~al~f~SGy-~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls-~a~~~ 148 (388)
T COG0156 80 SGTSDLHVELEEELADFLG---------AEAALLFSSGF-VANLGLLSALLKKGDLIFSDELNHASIIDGIRLS-RAEVR 148 (388)
T ss_pred cCCcHHHHHHHHHHHHHhC---------CCcEEEEcccc-hhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhC-CCcEE
Confidence 4444457899999999987 34556666555 4666777899999999999999999999999975 99998
Q ss_pred EeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC
Q 011570 170 PVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE 249 (483)
Q Consensus 170 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~ 249 (483)
.+.. .|++.||+.++++...+.+.++|+....-...|.+-| +.+|++++++|+.++++||+|+-.+++.
T Consensus 149 ~f~H-------nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~- 217 (388)
T COG0156 149 RFKH-------NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGP- 217 (388)
T ss_pred EecC-------CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCC---HHHHHHHHHHhCcEEEEEccccccccCC-
Confidence 8874 4789999999886533323466666677788999999 8888999999999999999999888875
Q ss_pred CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH-hhhc--C-CCChHHHHHHHHhcCCh
Q 011570 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK-MSSF--G-LVSSQTQHLIATMLSDD 325 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~-~~~~--~-~~s~~~q~~~~~~l~~~ 325 (483)
.. ..+..... + ...+.+|+++||||+||..| ||+.+ +..+.+.+.. .+++ . ..++....++...++.
T Consensus 218 ~G-rG~~e~~g-~--~~~~vdi~~gTlsKAlGs~G---g~v~g-~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~- 288 (388)
T COG0156 218 NG-RGLAEHFG-L--EPEEVDIIVGTLGKALGSSG---GYIAG-SAALIDYLRNRARPFIFSTALPPAVAAAALAALRI- 288 (388)
T ss_pred CC-ccHHHHhC-C--CCccceEEEEEchhhhcccC---ceeeC-cHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHH-
Confidence 22 23333221 0 02356889999999999888 99999 5666666554 3444 2 2233222233333332
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC
Q 011570 326 QFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC 405 (483)
Q Consensus 326 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~ 405 (483)
++ .....++++.++..++...+...|+.+.++.. ..+.+.+.+. .....+...|+++ ||.+.+......
T Consensus 289 --l~-~~~~~r~~L~~~~~~~~~~~~~~~~~~~~s~s-~I~pv~~gd~------~~a~~~s~~l~~~-Gi~v~~i~~PTV 357 (388)
T COG0156 289 --LE-EGPERRERLQELAAFFRSLLKALGLVLLPSES-PIIPVILGDE------ERALEASRALLEE-GIYVSAIRPPTV 357 (388)
T ss_pred --HH-hCHHHHHHHHHHHHHHHHHHHhcCCccCCCCC-CeeeeEeCCH------HHHHHHHHHHHHC-CeeEeeecCCCC
Confidence 11 13455667777878888777766877655544 4666666542 2244777888877 999988766555
Q ss_pred C-CCCEEEEEecc-CCHHHHHHHHHHHHHH
Q 011570 406 P-NPGWFRVCFAN-MDDRTMEIALSRITSF 433 (483)
Q Consensus 406 ~-~~~~iRis~~~-~~~e~l~~~l~~L~~~ 433 (483)
+ +...+|+++.. .++++++.+++.|.++
T Consensus 358 p~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 358 PKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 4 34579999966 6999999999998764
No 185
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.90 E-value=7.5e-21 Score=192.15 Aligned_cols=215 Identities=19% Similarity=0.255 Sum_probs=149.9
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH----Hhhh
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD----LRWR 163 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~ 163 (483)
.+|+.+ -..+|++.+|++.+ .+..+++++++.++..++.+++.+||+|+++.|.|+..... +..
T Consensus 54 ~r~~~p-~~~~le~~lA~l~g----------~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~- 121 (391)
T TIGR01328 54 SRLGNP-TVSNLEGRIAFLEG----------TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTK- 121 (391)
T ss_pred eCCCCc-hHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhc-
Confidence 345544 25789999999986 23467777778899999999999999999999988754433 333
Q ss_pred cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 164 TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 164 ~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
.|+++..++++ |++.+++++.+ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..
T Consensus 122 ~G~~~~~vd~~-------d~e~l~~~i~~------~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~ 185 (391)
T TIGR01328 122 FGIQVDFINMA-------IPEEVKAHIKD------NTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFAT 185 (391)
T ss_pred CCeEEEEECCC-------CHHHHHHhhcc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCch
Confidence 48888888753 68888888864 7899999999999999998 77888888999999999999975
Q ss_pred CccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceE-EEEEecChHHHHHHHHh--hhc-C-CCChHHHHHH
Q 011570 244 TVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRV-GIIYSYNDQVVSCARKM--SSF-G-LVSSQTQHLI 318 (483)
Q Consensus 244 ~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRi-G~li~~~~~l~~~~~~~--~~~-~-~~s~~~q~~~ 318 (483)
..+. . ++ .. ...+++.|+||.+|.+|.++ |++++ ++.+.+.++.. ... + .+++.....+
T Consensus 186 ~~~~--~---~~-~~---------g~Divv~S~sK~lgg~g~~~gG~v~~-~~~li~~l~~~~~~~~~g~~l~~~~a~l~ 249 (391)
T TIGR01328 186 PMLT--N---PV-AL---------GVDVVVHSATKYIGGHGDVVAGLICG-KAELLQQIRMVGIKDMTGSVISPFDAWLI 249 (391)
T ss_pred hccC--C---ch-hc---------CCCEEEccccccccCCCCceEEEEEc-CHHHHHHHHHHHHHhCCCCCCCcHHHHHH
Confidence 3222 1 11 11 23377899999999889875 56666 55555554432 112 2 2344333333
Q ss_pred HHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 319 ATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
..-++. +..+.++..++...+.+.|+++
T Consensus 250 l~~L~t-------l~~r~~~~~~na~~la~~L~~~ 277 (391)
T TIGR01328 250 LRGLKT-------LNIRMKRHSENAMKVAEYLKSH 277 (391)
T ss_pred HhCcCc-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 333332 2333445566677777777765
No 186
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=7e-21 Score=192.28 Aligned_cols=212 Identities=19% Similarity=0.234 Sum_probs=149.8
Q ss_pred CCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh---cCcEEEE
Q 011570 94 HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR---TGVQLVP 170 (483)
Q Consensus 94 ~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~---~G~~~~~ 170 (483)
....+|++++|++++. ...++ ++++++++..++.+++++||+|+++.|+|+.....+... .|+++..
T Consensus 61 p~~~~Le~~lA~~~g~---------~~~i~-~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~ 130 (388)
T PRK07811 61 PTRTALEEQLAALEGG---------AYGRA-FSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTP 130 (388)
T ss_pred ccHHHHHHHHHHHhCC---------CceEE-eCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEE
Confidence 3578999999999862 22344 455689999999999999999999999998654443321 2777766
Q ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCC
Q 011570 171 VVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKES 250 (483)
Q Consensus 171 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~ 250 (483)
++. .|++.+++++.+ ++|+|++++|+||||.+.+ +++|+++|+++|++||+|++|+..... .
T Consensus 131 ~d~-------~d~e~l~~~i~~------~tklV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~--~ 192 (388)
T PRK07811 131 VDL-------SDLDAVRAAITP------RTKLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQ--Q 192 (388)
T ss_pred eCC-------CCHHHHHHhcCc------CCeEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccC--C
Confidence 653 378999988864 7899999999999999877 888888999999999999999753221 1
Q ss_pred CcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHhhhc-CC-CChHHHHHHHHhcCChhH
Q 011570 251 SFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKMSSF-GL-VSSQTQHLIATMLSDDQF 327 (483)
Q Consensus 251 ~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~~~~-~~-~s~~~q~~~~~~l~~~~~ 327 (483)
++ .+ ...+++.|+||.++.+| .+.||++++++.+.+.+...... +. .++.....+...++.
T Consensus 193 ---p~-~~---------gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t--- 256 (388)
T PRK07811 193 ---PL-AL---------GADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT--- 256 (388)
T ss_pred ---ch-hh---------CCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc---
Confidence 11 11 23478899999998644 67899998777776665554433 22 333333333333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 328 VEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 328 ~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
+..+.++..++...+.+.|+++
T Consensus 257 ----l~~R~~~~~~na~~la~~L~~~ 278 (388)
T PRK07811 257 ----LAVRMDRHSENAEAVAEFLAGH 278 (388)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhC
Confidence 3344444566777788888776
No 187
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.90 E-value=5.8e-21 Score=193.72 Aligned_cols=214 Identities=20% Similarity=0.260 Sum_probs=148.8
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH----HHhhhc
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR----DLRWRT 164 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~----~~~~~~ 164 (483)
+|+.+ -...|++.+|++++ .+..+++++++.++..++.+++++||+|+++.|+|..... .+.. .
T Consensus 61 r~~~p-~~~~le~~lA~l~g----------~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~-~ 128 (403)
T PRK07503 61 RISNP-TLALLEQRMASLEG----------GEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGE-F 128 (403)
T ss_pred CCCCc-hHHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhh-C
Confidence 44443 36889999999876 1234666677889999999999999999999999976433 2334 4
Q ss_pred CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC
Q 011570 165 GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT 244 (483)
Q Consensus 165 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~ 244 (483)
|++++.++.+ |++.+++++.+ ++++|++++|+||||.+.+ +++|.++|+++|++||+|++|...
T Consensus 129 G~~v~~vd~~-------d~~~l~~~i~~------~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~ 192 (403)
T PRK07503 129 GVTVRHVDLT-------DPAALKAAISD------KTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTP 192 (403)
T ss_pred CEEEEEeCCC-------CHHHHHHhcCc------cCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccc
Confidence 8988888753 68889888864 7899999999999999998 788888889999999999999754
Q ss_pred ccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh--hhc--CCCChHHHHHHH
Q 011570 245 VFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM--SSF--GLVSSQTQHLIA 319 (483)
Q Consensus 245 ~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~--~~~--~~~s~~~q~~~~ 319 (483)
.. . . ++ .+ ...++++|+||.+|.+| +|.|+++. ++.+.+.++.. ... ..++++.+..+.
T Consensus 193 ~~-~-~---~l-~~---------g~Di~v~S~tK~l~g~gd~~gG~v~~-~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l 256 (403)
T PRK07503 193 YL-Q-R---PL-EL---------GADLVVHSATKYLGGHGDITAGLVVG-GKALADRIRLEGLKDMTGAVMSPFDAFLLM 256 (403)
T ss_pred cc-C-C---ch-hh---------CCCEEEccccccccCCCceeEEEEEc-CHHHHHHHHhhhHHhCcCCCCCHHHHHHHH
Confidence 22 2 2 11 12 33478899999998765 78899886 55565555422 222 234555444443
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 320 TMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
.-++. +..+.++..++...+.+.|+++
T Consensus 257 ~~L~t-------l~~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 257 RGLKT-------LALRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred cCcch-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 33332 2233333345666677777765
No 188
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.90 E-value=2.2e-23 Score=180.41 Aligned_cols=148 Identities=60% Similarity=1.158 Sum_probs=129.9
Q ss_pred chhhhhhhhhcCCCCCCCccchhhhhhhcCCCCCCCCCCCcccccchhhhhcHHHHHHHHhcCCCCccccccc-cccccc
Q 011570 8 QVQLLSKIAAGNGHGEDSPYFDGWKAFESDPYHPTKNPNGVIQMGLAENLLCHELVEDWLMNNPKASICSAEG-LNEFKG 86 (483)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 86 (483)
.+..+++++.+.++|..+|||.+|+.+..++|++..||.++|+|+++||.++.+.+..++.+.+.+.+..+++ .....+
T Consensus 5 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~ 84 (153)
T PLN02994 5 ENQLLSKLALADKHGEASPYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKD 84 (153)
T ss_pred chhhhhhhcccccCCCCchHHHHHHHHhcCCCCcccCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHH
Confidence 3568899999999999999999999999999999999999999999999999999999998866544444333 222334
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC
Q 011570 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPG 155 (483)
Q Consensus 87 ~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~ 155 (483)
+..|+++.|.++||+++|+|+.+.+|..+++++++|++|+|+++++..++.+|++|||.|++++|+|+.
T Consensus 85 ~a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 85 IALFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred HhcCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 466999999999999999999998885566889999999999999999999999999999999999973
No 189
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.90 E-value=2.5e-21 Score=196.84 Aligned_cols=269 Identities=17% Similarity=0.166 Sum_probs=179.6
Q ss_pred CCcEEEeCChhHHHHHHHHHhcC---------CC-CeEEEeCCCCcChH-HHHhhhcCcE------------EEEeecCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLAD---------PG-DAFLVPTPYYPGFD-RDLRWRTGVQ------------LVPVVCDS 175 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~---------~g-d~Vlv~~P~y~~~~-~~~~~~~G~~------------~~~v~~~~ 175 (483)
.+.+++++++++++..++..... +| ++|+...-+|.+.. ..+.. .+.. +..++.
T Consensus 97 ~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-- 173 (396)
T PRK04073 97 KDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSL-SSEEEYKRGFGPMLPGIKKIPY-- 173 (396)
T ss_pred CCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhh-cCCcccccCCCCCCCCceEeCC--
Confidence 36899999999999998876531 34 67888877776543 33222 1211 111211
Q ss_pred CCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHH-HHHHHHHHHhhcCcEEEEccccccCccCCCCCcch
Q 011570 176 SNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRE-TLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVS 254 (483)
Q Consensus 176 ~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~-~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s 254 (483)
.|++.+++.+.+ ++++|++++|+||||.+++.+ .+++|.++|+++|+++|+||+|.++...+ .. ..
T Consensus 174 -----~d~~~l~~~i~~------~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g-~~-~~ 240 (396)
T PRK04073 174 -----GDLEALKAAITP------NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTG-KL-FA 240 (396)
T ss_pred -----CCHHHHHHhccc------CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCc-HH-HH
Confidence 168888887753 678888888899999998764 69999999999999999999998753332 11 11
Q ss_pred HHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--hcCCCChHHHHHHHHhcCChhHHHHHH
Q 011570 255 IAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--SFGLVSSQTQHLIATMLSDDQFVEKFI 332 (483)
Q Consensus 255 ~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~ 332 (483)
.+... .... +.+|||.+|.+|+|+||+++ ++++.+.+.... ..+..+++++.++.+.|+... +
T Consensus 241 -~~~~~-----~~pd---i~~~sK~lg~gg~~ig~~~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~--~--- 305 (396)
T PRK04073 241 -CDWDN-----VTPD---MYILGKALGGGVFPISCVAA-NRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLE--E--- 305 (396)
T ss_pred -hhhcC-----CCCC---EEEecccccCCCCcceEEEE-cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH--h---
Confidence 11211 1122 23689999988899999999 455665553321 223467888888777775211 1
Q ss_pred HHHHHHHHHHHHHHHHhhhcCC---ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCC
Q 011570 333 AESAKRIAERHKAFTWGLSQVG---IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPG 409 (483)
Q Consensus 333 ~~~~~~l~~~~~~l~~~L~~~g---i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~ 409 (483)
....++.+++++++.+.|++++ +....+. |+|++++++.. ..++++.|++ +||.+.+. +++
T Consensus 306 ~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~-g~~~~~~~~~~--------~~~~~~~l~~-~Gv~~~~~------~~~ 369 (396)
T PRK04073 306 EKLPERSLELGEYFKEQLKEIDNPMIKEVRGR-GLFIGVELNEP--------ARPYCEALKE-EGLLCKET------HET 369 (396)
T ss_pred cCHHHHHHHHHHHHHHHHHhhcCCcccceecc-eEEEEEEecch--------HHHHHHHHHH-CCeEEecC------CCC
Confidence 1122344556677777777653 3333444 56788888631 2367777765 69998763 246
Q ss_pred EEEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 410 WFRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 410 ~iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
+|||++.. .+++++++++++|++++
T Consensus 370 ~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 370 VIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred EEEEECCcccCHHHHHHHHHHHHHHh
Confidence 89999754 59999999999998875
No 190
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.90 E-value=1.9e-21 Score=199.65 Aligned_cols=309 Identities=14% Similarity=0.135 Sum_probs=195.4
Q ss_pred CCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhc--CcE
Q 011570 92 DYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRT--GVQ 167 (483)
Q Consensus 92 ~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~--G~~ 167 (483)
+..+..+|+++|++++. ..++|++++|+++++..+++... ...++|+...++|.++...+.... +..
T Consensus 86 ~~~~~~~lae~l~~~~~---------~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~ 156 (423)
T TIGR00713 86 PTEAEILLAKEIISRVP---------SVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAA 156 (423)
T ss_pred CCHHHHHHHHHHHHhCC---------cccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCccc
Confidence 44567899999998764 23689999999999999887532 245899999999998754333210 111
Q ss_pred EEEeecCCC-------CCcc---cCHHHHHHHHHHHHhcCCceeEEEEe-CCCCCCcCCCC-HHHHHHHHHHHhhcCcEE
Q 011570 168 LVPVVCDSS-------NDFK---VTMEALEAAYEKAQESNIRIKGVLIT-NPSNPLGTFLD-RETLKDIVSFINEKNIHL 235 (483)
Q Consensus 168 ~~~v~~~~~-------~~~~---~d~~~l~~~i~~~~~~~~~~~~i~l~-~P~NPtG~~~~-~~~l~~i~~~a~~~~~~i 235 (483)
....+..+. ..+. .|++.+++.+.+. +.++++|++. +|+| +|.+.+ .+.+++|.++|++||+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~---~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~ll 232 (423)
T TIGR00713 157 TLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEY---GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLL 232 (423)
T ss_pred ccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHc---CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEE
Confidence 111110000 0000 2789999888642 2367788775 7888 798887 688999999999999999
Q ss_pred EEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh-----hcCCC
Q 011570 236 VCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS-----SFGLV 310 (483)
Q Consensus 236 I~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~-----~~~~~ 310 (483)
|+||+|.++.++ ..+ . ..... . .++ +.||||.+| +|+|+||+++ ++.+.+.+.... ..+..
T Consensus 233 I~DEv~~g~r~g--~~~-~-~~~~~-~---~pD----i~t~sK~l~-~G~pig~v~~-~~~i~~~~~~~~~~~~~~T~~~ 298 (423)
T TIGR00713 233 IFDEVMTGFRVA--LGG-A-QEYFG-V---EPD----LTTLGKIIG-GGLPVGAFGG-RREIMERLAPEGPVYQAGTLSG 298 (423)
T ss_pred EEEccccccccC--cch-h-HHHhC-C---Ccc----hhhhhhhhc-CCCceeeeeE-HHHHHHhhCcCCCeeeccCCCC
Confidence 999999876332 221 1 11111 0 223 238999999 9999999999 456666554211 11346
Q ss_pred ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeec-CCceEE-EeeecCchhh-----ccChHHHH
Q 011570 311 SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLK-SNAGLF-LWMDLHHLLK-----EQTYEAEM 383 (483)
Q Consensus 311 s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~-~~~g~f-~~~~l~~~~~-----~~~~~~~~ 383 (483)
+++++.++.+.|+.... ..+.++.++.....++.+.+.+.++++.... ..|+++ +++..+...+ ..+.....
T Consensus 299 ~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~ 377 (423)
T TIGR00713 299 NPLAMAAGLATLKLLDE-EGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFA 377 (423)
T ss_pred CHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHH
Confidence 78888877666652110 1134455555666667777777777765532 334332 2233221100 00111122
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 384 ALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 384 ~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
.++..+++ +||.+.++ .| +.+|+++. .+++++++++++|.+++++
T Consensus 378 ~~~~~l~~-~Gv~v~~~-~~-----~~~~l~~~-~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 378 KFFHEMLD-KGVFLPPS-QF-----EACFLSAA-HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred HHHHHHHH-CCeEEecC-Cc-----cceeeECC-CCHHHHHHHHHHHHHHHhh
Confidence 56777775 69998754 22 35888886 6999999999999998864
No 191
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.89 E-value=5.1e-21 Score=193.84 Aligned_cols=216 Identities=16% Similarity=0.221 Sum_probs=155.1
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcCh----HHHHhhh
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGF----DRDLRWR 163 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~----~~~~~~~ 163 (483)
.+|+.+. ..+|++.+|++.+ .++.+++++++.++..++.+++++||+|+++...|++. ...++..
T Consensus 65 ~r~~~p~-~~~le~~lA~l~g----------~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~ 133 (403)
T PRK07810 65 SRYGNPT-VSMFEERLRLIEG----------AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRW 133 (403)
T ss_pred eCCCCch-HHHHHHHHHHHhC----------CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHc
Confidence 4566553 6789999999875 34777888888899999989999999999988666443 3445554
Q ss_pred cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 164 TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 164 ~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
|++++.++. .|++.+++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.
T Consensus 134 -G~~v~~vd~-------~d~~~l~~ai~~------~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~ 196 (403)
T PRK07810 134 -GVETVFVDG-------EDLSQWEEALSV------PTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFAT 196 (403)
T ss_pred -CcEEEEECC-------CCHHHHHHhcCc------CceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCc
Confidence 999988863 378899998864 7899999999999999998 88888999999999999999975
Q ss_pred CccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceE-EEEEecChHHHHHHHHh-hhc-CCCChHHHHHHHH
Q 011570 244 TVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRV-GIIYSYNDQVVSCARKM-SSF-GLVSSQTQHLIAT 320 (483)
Q Consensus 244 ~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRi-G~li~~~~~l~~~~~~~-~~~-~~~s~~~q~~~~~ 320 (483)
..+.. ++ .+ +..+++.|++|.++..|.++ |+++++++.+.+.++.. ... ..++++.+.++..
T Consensus 197 ~~~~~-----~~-~~---------gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~ 261 (403)
T PRK07810 197 PLLQR-----GL-PL---------GADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLK 261 (403)
T ss_pred cccCC-----hh-hc---------CCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHh
Confidence 43221 11 11 34577899999998789887 78887555454434332 222 2356666655555
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 321 MLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
-|+. +..+.++..++...+.+.|+++
T Consensus 262 ~L~t-------l~~R~~~~~~~a~~~a~~L~~~ 287 (403)
T PRK07810 262 GLET-------LALRVRHSNASALRIAEFLEGH 287 (403)
T ss_pred ccCc-------HHHHHHHHHHHHHHHHHHHhcC
Confidence 5543 3344444566666777778776
No 192
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=6e-21 Score=192.86 Aligned_cols=215 Identities=13% Similarity=0.074 Sum_probs=151.2
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH----Hhhhc
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD----LRWRT 164 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~~ 164 (483)
+|+.+ ...+|++.+|++.+ .+++++++|+++++..++.++++|||+|+++.|+|+.+... +.. .
T Consensus 61 r~~~p-t~~~Le~~lA~l~g----------~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~-~ 128 (394)
T PRK07050 61 LHATP-TSLALAQRLAEIEG----------GRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARD-F 128 (394)
T ss_pred CCCCH-HHHHHHHHHHHHhC----------CCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHh-c
Confidence 44433 25677777777654 46899999999999999999999999999999999987643 344 4
Q ss_pred CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC
Q 011570 165 GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT 244 (483)
Q Consensus 165 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~ 244 (483)
|++++.++.. +.+.+++++++ ++|+|++++|+||+|.+ .++++|+++|+++|++||+|++|...
T Consensus 129 Gi~v~~vd~~-------~~~~l~~~i~~------~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~a~~ 192 (394)
T PRK07050 129 GITVRFYDPL-------IGAGIADLIQP------NTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTYSAG 192 (394)
T ss_pred CeEEEEECCC-------CHHHHHHhcCC------CCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCcccc
Confidence 8988887632 34667777653 78999999999999754 55999999999999999999999743
Q ss_pred ccCCCCCcchHHHhhhhccccCCCeEEEEecCccccC-CCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHh
Q 011570 245 VFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG-FPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATM 321 (483)
Q Consensus 245 ~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~ 321 (483)
.+.. + + ..+..+++.|+||.++ ..+++.|++++.++.+.+.++..+.. ..+++.....+..-
T Consensus 193 ~~~~-----~---l-------~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~ 257 (394)
T PRK07050 193 LAFK-----P---F-------EHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRG 257 (394)
T ss_pred cccC-----H---H-------HcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcC
Confidence 2211 1 1 1244688999999986 34467899888777776666544443 23455444434333
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 322 LSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 322 l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
+.. +..+.++..++...+.+.|+++
T Consensus 258 l~t-------l~~Rl~~~~~~a~~la~~L~~~ 282 (394)
T PRK07050 258 LPS-------LQVRLAAHDRSALEVAEWLKAR 282 (394)
T ss_pred CCc-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 333 2223444455556677777765
No 193
>PRK07505 hypothetical protein; Provisional
Probab=99.89 E-value=9.9e-21 Score=192.97 Aligned_cols=293 Identities=12% Similarity=0.134 Sum_probs=172.9
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc----CCCC-eEEEeCCCCcC-hH--HHHhhhcCcE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA----DPGD-AFLVPTPYYPG-FD--RDLRWRTGVQ 167 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~----~~gd-~Vlv~~P~y~~-~~--~~~~~~~G~~ 167 (483)
..++++.++++++ . +.++.++| +++...++..+. .+|+ .|++.+..|.+ +. ...... +.+
T Consensus 93 ~~~l~~~la~~~~--------~--~~~~~~sG-~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~-~~~ 160 (402)
T PRK07505 93 LKDLEEALSELFG--------A--SVLTFTSC-SAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICAD-ETE 160 (402)
T ss_pred HHHHHHHHHHHhC--------C--CEEEECCh-HHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhc-CCe
Confidence 3556666666543 2 44555554 556665654432 2232 36666655543 21 112222 566
Q ss_pred EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccC
Q 011570 168 LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFT 247 (483)
Q Consensus 168 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~ 247 (483)
++.+|. .|++.+++++.+ +++++++++|+||||.+++ +++|.++|+++|+++|+||+|+...|+
T Consensus 161 v~~~~~-------~d~~~l~~~~~~------~~~~~vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g 224 (402)
T PRK07505 161 VETIDH-------NDLDALEDICKT------NKTVAYVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYG 224 (402)
T ss_pred EEEeCC-------CCHHHHHHHHhc------CCCEEEEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcC
Confidence 777664 378889888753 5678999999999999999 677788888999999999999654444
Q ss_pred CCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcC----CCChHHHHHHHHhcC
Q 011570 248 KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFG----LVSSQTQHLIATMLS 323 (483)
Q Consensus 248 ~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~----~~s~~~q~~~~~~l~ 323 (483)
..........+ .. ..++++++++||||.+|.+| ||+++.++.+.+.+......+ ++++++..++.+.+.
T Consensus 225 ~~g~~~~~~~~-~~---~~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~ 297 (402)
T PRK07505 225 KNGEGYVRSEL-DY---RLNERTIIAASLGKAFGASG---GVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAE 297 (402)
T ss_pred CCCCchHHHHc-CC---CCCCCeEEEEechhhhhccC---eEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHH
Confidence 31111111111 10 02477899999999999776 888765666776665543321 234455555545443
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCC
Q 011570 324 DDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSF 403 (483)
Q Consensus 324 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f 403 (483)
-. .++++.+..+.++++...+...+... ....+.++.++.++.. ....++.+.|+ ++||.++++..+
T Consensus 298 ~~--~~~~~~~~~~~l~~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~------~~~~~~~~~l~-~~Gi~v~~~~~p 364 (402)
T PRK07505 298 IH--LSEELDQLQQKLQNNIALFDSLIPTE----QSGSFLPIRLIYIGDE------DTAIKAAKQLL-DRGFYTSPVFFP 364 (402)
T ss_pred HH--hccCcHHHHHHHHHHHHHHHHHHHhc----CCCCCCCEEEEEeCCH------HHHHHHHHHHH-HCCCeEeeecCC
Confidence 10 01122333444555544433322110 0111212223333321 11336777777 459999998543
Q ss_pred CCC-CCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 404 HCP-NPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 404 ~~~-~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
... +++++||+++. .+++++++++++|++++++
T Consensus 365 ~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 365 VVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred CCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 322 33689999976 5999999999999998754
No 194
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.89 E-value=8.1e-21 Score=191.55 Aligned_cols=215 Identities=20% Similarity=0.283 Sum_probs=152.7
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH----HHhhh
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR----DLRWR 163 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~----~~~~~ 163 (483)
.+|+.+. ..+|++.+|++.+ .+.+++++++++++..++.+++++||+|+++.+.|+.... .+...
T Consensus 49 ~r~~~p~-~~~le~~la~l~g----------~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~ 117 (380)
T TIGR01325 49 SRYANPT-VAAFEERIAALEG----------AERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRF 117 (380)
T ss_pred ecCCCch-HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHh
Confidence 3555443 6889999998865 2577889999999999999999999999999998875432 34444
Q ss_pred cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 164 TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 164 ~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
|++++.++.+ |++.+++++.+ ++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|..
T Consensus 118 -g~~v~~v~~~-------d~~~l~~~i~~------~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~ 180 (380)
T TIGR01325 118 -GIEVSFVDPT-------DLNAWEAAVKP------NTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFAT 180 (380)
T ss_pred -CCEEEEECCC-------CHHHHHHhcCC------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcc
Confidence 9998888753 67888887753 7899999999999999998 78888888999999999999975
Q ss_pred CccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceE-EEEEecChHHHHHHHHh-hhcCC-CChHHHHHHHH
Q 011570 244 TVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRV-GIIYSYNDQVVSCARKM-SSFGL-VSSQTQHLIAT 320 (483)
Q Consensus 244 ~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRi-G~li~~~~~l~~~~~~~-~~~~~-~s~~~q~~~~~ 320 (483)
..+. . ++ .+ ...+++.|+||.++.+|.++ |+++++ +.+.+.+... ...+. .++... ..
T Consensus 181 ~~~~--~---pl-~~---------g~Divv~S~sK~l~g~g~~~gG~vv~~-~~~~~~l~~~~~~~g~~~~p~~a---~~ 241 (380)
T TIGR01325 181 PVLQ--Q---PL-KL---------GADVVVYSATKHIDGQGRVMGGVIAGS-EELMAEVAVYLRHTGPAMSPFNA---WV 241 (380)
T ss_pred cccC--C---ch-hh---------CCCEEEeeccceecCCCCeEEEEEEeC-HHHHHHHHHHHHhhCCCCCHHHH---HH
Confidence 4222 1 11 11 33477889999998788887 677764 4455544433 23332 233332 23
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 321 MLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
++..... +..+.++..+++..+.+.|+++
T Consensus 242 ~l~~l~t----l~~r~~~~~~~a~~la~~L~~~ 270 (380)
T TIGR01325 242 LLKGLET----LSLRMQKQFDSALAIAEWLQAQ 270 (380)
T ss_pred HHhccCc----HHHHHHHHHHHHHHHHHHHHcC
Confidence 3333332 3344555667778888888876
No 195
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.89 E-value=1.2e-20 Score=193.27 Aligned_cols=312 Identities=10% Similarity=0.071 Sum_probs=191.7
Q ss_pred HHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHH---hcCCCCeEEEeCCCCcChHHHHhhhcCcEE-------
Q 011570 99 FRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFC---LADPGDAFLVPTPYYPGFDRDLRWRTGVQL------- 168 (483)
Q Consensus 99 Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~---l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~------- 168 (483)
...++|+++....+ .+.. +.+++++++++++..++.. +.++ ..|+...++|.+....+... +...
T Consensus 85 ~~~~la~~l~~~~~--~~~~-~~~~f~~sGsea~e~Alklar~~~~r-~~iv~~~~~yHG~~~~~~~~-~~~~~~~~~~~ 159 (425)
T PRK08088 85 PYLELCEKMNQKVP--GDFA-KKTLLVTTGSEAVENAVKIARAATKR-SGVIAFTGAYHGRTHYTLAL-TGKVNPYSAGM 159 (425)
T ss_pred HHHHHHHHHHHhCC--CCCC-CEEEEeCCcHHHHHHHHHHHHHHhCC-CeEEEECCccCCccHHHHHh-hCCCCccccCC
Confidence 34477777776543 1111 4666666666766655544 3344 45677799998876554443 2211
Q ss_pred ---------EEeecCCCCCccc--CHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcCCCCHHHHHHHHHHHhhcCcEEE
Q 011570 169 ---------VPVVCDSSNDFKV--TMEALEAAYEKAQESNIRIKGVLITNP-SNPLGTFLDRETLKDIVSFINEKNIHLV 236 (483)
Q Consensus 169 ---------~~v~~~~~~~~~~--d~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~~~~~~~l~~i~~~a~~~~~~iI 236 (483)
+++|.+.. +... +++.|++.+.+. ....++.+|++... +|+++...+.+.+++|+++|+++|+++|
T Consensus 160 ~~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~~l~~~-~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI 237 (425)
T PRK08088 160 GLMPGHVYRALYPCPLH-GVSEDDAIASIERIFKND-AAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLI 237 (425)
T ss_pred CCCCCCcEEcCCCcccc-CccHHHHHHHHHHHHHhc-cCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 11222111 1111 145577766421 11235655554422 6887788899999999999999999999
Q ss_pred EccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--hcCCCChHH
Q 011570 237 CDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--SFGLVSSQT 314 (483)
Q Consensus 237 ~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--~~~~~s~~~ 314 (483)
+||+|.++.+.+ .+.++... +.+..+.||||.++ +|+|+||+++ ++.+.+.+.... ..+..++++
T Consensus 238 ~Dev~~g~g~~g--~~~~~~~~---------~~~pdi~s~sK~l~-~G~rig~v~~-~~~~~~~~~~~~~~~t~~~~~~~ 304 (425)
T PRK08088 238 ADEVQTGAGRTG--TLFAMEQM---------GVAADLTTFAKSIA-GGFPLAGVTG-RAEVMDAIAPGGLGGTYAGNPIA 304 (425)
T ss_pred EeccccCCCcCc--chhHHhhc---------CCCCCEEEEecccc-CCCcceeeEe-cHHHHhhcCCCCCCCCCCcCHHH
Confidence 999998753332 22222111 22233689999998 9999999999 555655543222 123468899
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc-eeecCCceEEEeeecCchhhc--cChHHHHHHHHHHHH
Q 011570 315 QHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGI-GCLKSNAGLFLWMDLHHLLKE--QTYEAEMALWRVIIN 391 (483)
Q Consensus 315 q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi-~~~~~~~g~f~~~~l~~~~~~--~~~~~~~~~~~~Ll~ 391 (483)
|.++..+|+.... .+++++.++..+.+++.+.+.+.+.+. ....+. |+++|+.+....+. ........+...+++
T Consensus 305 ~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~ 382 (425)
T PRK08088 305 CAAALAVLKVFEQ-ENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGDHSKPNAKLTAQIVARARD 382 (425)
T ss_pred HHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceEEEEEEecCCCCCCCCHHHHHHHHHHHHh
Confidence 9999988876533 445555555544444555544444443 222223 78999999532110 011223466777765
Q ss_pred hcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 392 EVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 392 ~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
.||.+.|+..| .+.+||+++. .+++++++++++|++++++.
T Consensus 383 -~Gv~~~~~~~~----~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 383 -KGLILLSCGPY----YNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred -CCCEEecCCCC----CCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 59998876544 3679999985 58999999999999998754
No 196
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.88 E-value=1.1e-20 Score=189.92 Aligned_cols=174 Identities=18% Similarity=0.301 Sum_probs=136.7
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCD 174 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~ 174 (483)
..++++++++++.+.+| .+++++|+|+++++.+++.++ ++|||+|+++.|+|..+...+... |++++.++++
T Consensus 29 ~g~~~~~~e~~la~~~g------~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~~~~-G~~~v~vd~d 101 (376)
T TIGR02379 29 DGPFSRRCETWLENRTG------TKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLR-GAKIVFVDIR 101 (376)
T ss_pred CcHHHHHHHHHHHHHhC------CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHc-CCEEEEEecC
Confidence 34577777777776544 578999999999999999887 899999999999999988888775 9999999998
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc-cCCCCCcc
Q 011570 175 SSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV-FTKESSFV 253 (483)
Q Consensus 175 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~-~~~~~~~~ 253 (483)
++ +|.+|++.+++++.+ ++++|+ |+||+|...+ +.+|.++|+++|++||+|++|+... +.+ .+..
T Consensus 102 ~~-~~~~d~~~le~~i~~------~tk~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeDaa~~~g~~~~~-~~~g 167 (376)
T TIGR02379 102 PD-TMNIDETLIESAITH------RTKAIV---PVHYAGVACD---MDTIMALANKHQLFVIEDAAQGVMSTYKG-RALG 167 (376)
T ss_pred CC-cCCCCHHHHHHhcCc------CceEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEECccccCCccCC-cccC
Confidence 54 588999999998864 788876 6788999988 7788999999999999999998643 333 2211
Q ss_pred hHHHhhhhccccCCCeEEEEecCc----cccCCCCceEEEEEecChHHHHHHHHhhh
Q 011570 254 SIAEIIDQDIACNRNLIHIVYSLS----KDMGFPGFRVGIIYSYNDQVVSCARKMSS 306 (483)
Q Consensus 254 s~~~l~~~~~~~~~~~vi~~~S~S----K~~g~~GlRiG~li~~~~~l~~~~~~~~~ 306 (483)
....+++|| |.+. +|.+.|+++++++++.+.++.++.
T Consensus 168 ---------------~~~~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~~ 208 (376)
T TIGR02379 168 ---------------SIGHLGTFSFHETKNYT-SGGEGGALLINDQAFIERAEIIRE 208 (376)
T ss_pred ---------------CCCCEEEEeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHHH
Confidence 111233444 8885 788999999987888877766544
No 197
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.88 E-value=3.6e-20 Score=188.76 Aligned_cols=287 Identities=14% Similarity=0.142 Sum_probs=189.5
Q ss_pred CCcEEEeCChhHHHHHHHHHhc--------CCCCeEEEeCCCCcChHHHHhhhcCcEEEE---eecCCC--CCcccCHHH
Q 011570 119 PDRIVMSGGATGAHETVAFCLA--------DPGDAFLVPTPYYPGFDRDLRWRTGVQLVP---VVCDSS--NDFKVTMEA 185 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~--------~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~---v~~~~~--~~~~~d~~~ 185 (483)
.+.+++++++++++..++.... .+...|+..+.+|++.........+..... .++... .-...|++.
T Consensus 96 ~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 175 (406)
T PRK12381 96 ADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNS 175 (406)
T ss_pred CCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHH
Confidence 4699999999999999997742 234689999999987765433322321100 011000 001237888
Q ss_pred HHHHHHHHHhcCCceeEEEEeCCCCCCcCCC--CHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhcc
Q 011570 186 LEAAYEKAQESNIRIKGVLITNPSNPLGTFL--DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDI 263 (483)
Q Consensus 186 l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~--~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~ 263 (483)
+++.+.+ ++++|++ +|.||+|-++ +.+.+++|.++|++||+++|+||+|.++.+.+ . +.+.....-
T Consensus 176 l~~~l~~------~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G-~-~~~~~~~~v--- 243 (406)
T PRK12381 176 ASALIDD------QTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTG-E-LYAYMHYGV--- 243 (406)
T ss_pred HHHhccC------CeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCc-c-hhhhHhhCC---
Confidence 8887752 6666666 7999998765 78999999999999999999999997754443 2 222111110
Q ss_pred ccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHH
Q 011570 264 ACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAE 341 (483)
Q Consensus 264 ~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~ 341 (483)
.++ +.||||.+| +|+|+||+++ ++.+.+.+.... ..+..+++.+.++.+.++. +. ....++.+++
T Consensus 244 --~pD----i~t~sK~l~-gG~~ig~~~~-~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~---l~--~~~~~~~~~~ 310 (406)
T PRK12381 244 --TPD----VLTTAKALG-GGFPIGAMLT-TEKCASVMTVGTHGTTYGGNPLASAVAGKVLEL---IN--TPEMLNGVKQ 310 (406)
T ss_pred --CCC----EEEehhhhh-CCCceEEEEE-cHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHH---Hh--hccHHHHHHH
Confidence 222 249999998 9999999999 466666553321 1234577888877776532 11 1234566677
Q ss_pred HHHHHHHhhhcCC--c--eeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc
Q 011570 342 RHKAFTWGLSQVG--I--GCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN 417 (483)
Q Consensus 342 ~~~~l~~~L~~~g--i--~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~ 417 (483)
+.+++.+.|++++ . .......|++++++++.... .....+...++ ++||.+.++ +++++||+++.
T Consensus 311 ~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~----~~~~~~~~~l~-~~Gv~v~~~------g~~~lRl~p~~ 379 (406)
T PRK12381 311 RHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYA----GKAKQISQEAA-KAGVMVLIA------GPNVVRFAPAL 379 (406)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchh----hHHHHHHHHHH-HCCcEEeeC------CCCEEEEeCCc
Confidence 7777877777653 2 12233457888998865211 11235555555 569999753 23589999976
Q ss_pred -CCHHHHHHHHHHHHHHHHHhhhcc
Q 011570 418 -MDDRTMEIALSRITSFMLKNVEAK 441 (483)
Q Consensus 418 -~~~e~l~~~l~~L~~~l~~~~~~~ 441 (483)
.+++++++++++|.+++++..+++
T Consensus 380 ~~t~~~i~~~~~~l~~~l~~~~~~~ 404 (406)
T PRK12381 380 NISEEEITTGLDRFARACERFVSRG 404 (406)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 699999999999999998776553
No 198
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=3.9e-20 Score=186.45 Aligned_cols=211 Identities=21% Similarity=0.217 Sum_probs=149.1
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh--cCcEEEEee
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR--TGVQLVPVV 172 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~G~~~~~v~ 172 (483)
...+|++.+|++++ .+++++++|+++++..++.+++++||+|+++.|+|..+...++.. .|+++..+.
T Consensus 54 ~~~~lE~~lA~l~g----------~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~ 123 (385)
T PRK08574 54 TLRPLEEALAKLEG----------GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY 123 (385)
T ss_pred cHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC
Confidence 46899999999976 357788899999999999999999999999999999877665321 377776543
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
+|++.+++++++ .++++|++++|+||||.+++ +++|+++|+++|++||+|++|+... .. .
T Consensus 124 --------~d~~~l~~~i~~-----~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~-~~-~-- 183 (385)
T PRK08574 124 --------PSTEDIIEAIKE-----GRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPL-LY-R-- 183 (385)
T ss_pred --------CCHHHHHHhcCc-----cCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccc-cC-C--
Confidence 467888888753 26899999999999999999 7788999999999999999996321 11 1
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCCCCce-EEEEEecChHHHHHHHHhhh-cC-CCChHHHHHHHHhcCChhHHH
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFR-VGIIYSYNDQVVSCARKMSS-FG-LVSSQTQHLIATMLSDDQFVE 329 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlR-iG~li~~~~~l~~~~~~~~~-~~-~~s~~~q~~~~~~l~~~~~~~ 329 (483)
++ . .+..+++.|+||.++.+|-. .|++++.++.+.+.+..... ++ .++++....+..-++.
T Consensus 184 -~l-~---------~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t----- 247 (385)
T PRK08574 184 -PL-R---------HGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT----- 247 (385)
T ss_pred -hh-h---------hCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc-----
Confidence 11 1 13458889999999766655 47777766666665544433 33 2344333333333332
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 330 KFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 330 ~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
+..+.++..++...+.+.|+++
T Consensus 248 --L~~R~~~~~~na~~la~~L~~~ 269 (385)
T PRK08574 248 --LEVRFERQCRNAMAIAEFLSEH 269 (385)
T ss_pred --HHHHHHHHHHHHHHHHHHHHcC
Confidence 2333444455667777777765
No 199
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.88 E-value=2e-21 Score=194.79 Aligned_cols=281 Identities=16% Similarity=0.187 Sum_probs=190.0
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC----CC-CeEEEeCCCCcChHHH---HhhhcCcE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD----PG-DAFLVPTPYYPGFDRD---LRWRTGVQ 167 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~----~g-d~Vlv~~P~y~~~~~~---~~~~~G~~ 167 (483)
..++|+.++++++ +++++|++|+|+++++..++.++.. +| +.|++....|+.+... ++.. |++
T Consensus 44 ~~~~r~~la~~~g--------~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~-G~~ 114 (353)
T TIGR03235 44 VERARKQVAEALG--------ADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERN-GFT 114 (353)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhc-CCE
Confidence 4577888888776 5788999999999999999888753 56 7888887777665443 3343 999
Q ss_pred EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccC
Q 011570 168 LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFT 247 (483)
Q Consensus 168 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~ 247 (483)
++.++.++ ++.+|++.+++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++++. +
T Consensus 115 v~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~~ivD~a~~~---g 180 (353)
T TIGR03235 115 VTYLPVDE--SGRIDVDELADAIRP------DTLLVSIMHVNNETGSIQP---IREIAEVLEAHEAFFHVDAAQVV---G 180 (353)
T ss_pred EEEEccCC--CCcCCHHHHHHhCCC------CCEEEEEEcccCCceeccC---HHHHHHHHHHcCCEEEEEchhhc---C
Confidence 99999874 457899999998753 6899999999999999999 78888899999999999999863 2
Q ss_pred CCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHH-HHHh---------hhcCCCChHHHHH
Q 011570 248 KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSC-ARKM---------SSFGLVSSQTQHL 317 (483)
Q Consensus 248 ~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~-~~~~---------~~~~~~s~~~q~~ 317 (483)
. .+ .++. ..+..+++.|.+|.+|.+| +|+++..++.+... .... ...+..+.....+
T Consensus 181 ~-~~-~~~~---------~~~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a 247 (353)
T TIGR03235 181 K-IT-VDLS---------ADRIDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVG 247 (353)
T ss_pred C-cc-cccc---------ccCCCEEEeehhhcCCCCc--eEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHH
Confidence 2 11 1211 1234567779999887566 89998865432111 1100 0112233344444
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCce---EEEeeecCchhhccChHHHHHHHHHHHHhcC
Q 011570 318 IATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAG---LFLWMDLHHLLKEQTYEAEMALWRVIINEVK 394 (483)
Q Consensus 318 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g---~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~g 394 (483)
+.+++.. +.+..+...++++++++++.+.|.+.|+++..+... ..+.+.++. .+ ..++...| ++ +
T Consensus 248 l~~al~~---~~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~-~~------~~~v~~~L-~~-~ 315 (353)
T TIGR03235 248 MGEAAEI---ARRNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILNFSIDG-VN------SEALIVNL-RA-D 315 (353)
T ss_pred HHHHHHH---HHhhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEEEEeCC-cC------HHHHHHHH-hC-C
Confidence 4444432 223456677888999999999998889887643221 133344442 11 12445555 55 8
Q ss_pred eEeeCCCCCCCCC--CCEEEEEeccCCHHHHHH
Q 011570 395 LNVSPGSSFHCPN--PGWFRVCFANMDDRTMEI 425 (483)
Q Consensus 395 V~v~pg~~f~~~~--~~~iRis~~~~~~e~l~~ 425 (483)
|.|.+|..|.... +.++|.+++ .+++++..
T Consensus 316 i~v~~g~~~~~~~~~~~~~l~~~g-~~~~~~~~ 347 (353)
T TIGR03235 316 AAVSTGSACSSSKYEPSHVLQAMG-LDTDRARG 347 (353)
T ss_pred eEEEchhhcCCCCCCCCHHHHHcC-CCHHHhCc
Confidence 9999999987543 346888887 45555443
No 200
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.88 E-value=3.4e-20 Score=187.45 Aligned_cols=210 Identities=15% Similarity=0.184 Sum_probs=144.1
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH----HHhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR----DLRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~----~~~~~~G~~~~~v 171 (483)
..+|++.+|++.+ .. +.+++++| +.++..++. ++++||+|+++.|.|+.... .++. .|++++.+
T Consensus 56 ~~~le~~lA~l~g--------~~-~~v~~~sG-~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~-~G~~v~~v 123 (390)
T PRK08064 56 REALEDIIAELEG--------GT-KGFAFASG-MAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSR-FGIEHTFV 123 (390)
T ss_pred HHHHHHHHHHHhC--------CC-CeEEECCH-HHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHH-cCCEEEEE
Confidence 5688888888876 22 45666666 567887775 78999999999999985443 3344 49999988
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+.+ |++.+++++.+ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .
T Consensus 124 ~~~-------d~~~l~~~l~~------~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~--~- 184 (390)
T PRK08064 124 DMT-------NLEEVAQNIKP------NTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQ--K- 184 (390)
T ss_pred CCC-------CHHHHHHhcCC------CceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCccccc--C-
Confidence 753 67888887753 7899999999999999988 778888888999999999999753211 1
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccC-CCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMG-FPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEK 330 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~ 330 (483)
++ .+ +..+++.|+||.++ -+|...|++++.++.+.+.++.....+......+.+.. ++.....
T Consensus 185 --~~-~~---------g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l-~~~gl~t--- 248 (390)
T PRK08064 185 --PL-DL---------GADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWL-VLRGLKT--- 248 (390)
T ss_pred --ch-hh---------CCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHH-HHcccCc---
Confidence 11 12 34578899999985 34466788877666777766665544323222222222 2232222
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcC
Q 011570 331 FIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 331 ~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
+..+.++..++...+.+.|+++
T Consensus 249 -l~~R~~~~~~~a~~la~~L~~~ 270 (390)
T PRK08064 249 -LHVRLEHSSETANKIALYLQEH 270 (390)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcC
Confidence 3444455566667777777765
No 201
>PRK05968 hypothetical protein; Provisional
Probab=99.88 E-value=4.8e-20 Score=186.27 Aligned_cols=281 Identities=15% Similarity=0.157 Sum_probs=181.9
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChH----HHHhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFD----RDLRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~----~~~~~~~G~~~~~v 171 (483)
..+|++.+|++.+ ....+ ++++++.++..++.++++|||+|+++.++|.... ..+... |++++.+
T Consensus 65 ~~~le~~lA~l~g---------~~~av-~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~-G~~v~~v 133 (389)
T PRK05968 65 VRAFEEMLAKLEG---------AEDAR-GFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRM-GVEVDYV 133 (389)
T ss_pred HHHHHHHHHHHhC---------CCcEE-EECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHc-CceEEEe
Confidence 5789999999876 12344 4556668999999889999999999999998643 334444 9998887
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+.+ |++.+++++. ++++|++++|+||++. ..++++|+++|+++|+++|+|++|....+..
T Consensus 134 d~~-------d~~~l~~~i~-------~tklV~ie~pt~~~~~---~~dl~~i~~la~~~gi~vivD~a~a~~~~~~--- 193 (389)
T PRK05968 134 DGR-------DEEAVAKALP-------GAKLLYLESPTSWVFE---LQDVAALAALAKRHGVVTMIDNSWASPVFQR--- 193 (389)
T ss_pred CCC-------CHHHHHHhcc-------cCCEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCcchhccC---
Confidence 632 7888888762 6789999987777654 4669999999999999999999997543221
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHhhh--c-CCCChHHHHHHHHhcCChhH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKMSS--F-GLVSSQTQHLIATMLSDDQF 327 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~~~--~-~~~s~~~q~~~~~~l~~~~~ 327 (483)
++ .+ ...+++.|+||.++.+| ++.|+++++ +.+.+.++.... . +.++++.+..+...|+.
T Consensus 194 --p~-~~---------g~Divv~S~tK~l~g~~~~~gG~i~~~-~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t--- 257 (389)
T PRK05968 194 --PI-TL---------GVDLVIHSASKYLGGHSDTVAGVVAGS-KEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT--- 257 (389)
T ss_pred --ch-hc---------CCcEEEeeccccccCCCCeEEEEEEEC-HHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc---
Confidence 11 11 23477889999998655 688998874 455544443221 2 23555555555444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcC-Ccee-ecC-----------CceEEEeeecCchhhccChHHHHHHHHHHHHhcC
Q 011570 328 VEKFIAESAKRIAERHKAFTWGLSQV-GIGC-LKS-----------NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVK 394 (483)
Q Consensus 328 ~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~-~~~-----------~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~g 394 (483)
+..+.++..++...+.+.|+++ ++.. ..| ..|-.+.+++.... ...+|+..|- ..+
T Consensus 258 ----l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~------~~~~f~~~L~-~~~ 326 (389)
T PRK05968 258 ----LPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGI------DVRAFADALK-LFR 326 (389)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHH------HHHHHHHhCC-ccE
Confidence 2233333455567777888776 5533 322 11225556665321 2336666664 346
Q ss_pred eEeeCCCCCC------------C---------CCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 395 LNVSPGSSFH------------C---------PNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 395 V~v~pg~~f~------------~---------~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
+.++-|..+. . -.++.+|+|++. |+.+.+++.|++++++.
T Consensus 327 ~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGl---E~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 327 LGVSWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGL---EGTEALWADLEQALAAA 387 (389)
T ss_pred EecCCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHHh
Confidence 6666555443 0 014689999995 44566667777776654
No 202
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.88 E-value=3.5e-20 Score=187.19 Aligned_cols=289 Identities=13% Similarity=0.128 Sum_probs=195.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCC-cEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChH-HHHhhhcCcEEE--
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPD-RIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFD-RDLRWRTGVQLV-- 169 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~-~~~~~~~G~~~~-- 169 (483)
..++++++|+.+.. .++ .+++++++++++..++.... .++++|++.+++|.+.. ..+.. .|.+..
T Consensus 68 ~~~~~~~la~~l~~--------~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~-~~~~~~~~ 138 (375)
T PRK04260 68 LNSLQEEVAQKLIG--------DKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSA-TGQDKIKD 138 (375)
T ss_pred CCHHHHHHHHHHhc--------CcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhc-cCCcccCC
Confidence 57788999987752 233 46889999999998887652 34578899888887532 33322 122111
Q ss_pred -------EeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHhhcCcEEEEcccc
Q 011570 170 -------PVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIY 241 (483)
Q Consensus 170 -------~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay 241 (483)
.++.. . ..|++.+++.+.+ ++.+|++.+++|++|.+. +.+.++++.++|+++|+++|+||+|
T Consensus 139 ~~~~~~~~~~~~---~-~~dl~~l~~~l~~------~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~ 208 (375)
T PRK04260 139 GFGDGVPHFSYA---I-FNDLNSVKALVNK------NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQ 208 (375)
T ss_pred CCCCCCCCeEEe---C-CCCHHHHHHhcCC------CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 01100 0 1378888887742 678889999999999975 4677999999999999999999999
Q ss_pred ccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--hcCCCChHHHHHHH
Q 011570 242 AATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--SFGLVSSQTQHLIA 319 (483)
Q Consensus 242 ~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--~~~~~s~~~q~~~~ 319 (483)
.++...+ .+.+...... .++ +.||||+++ +|+|+||++++ +.+.+.+.... ..+..+++++.++.
T Consensus 209 ~g~g~~g--~~~~~~~~~~-----~pd----i~t~sK~l~-~G~~ig~~~~~-~~~~~~~~~~~~~~t~~~~~~~~~aa~ 275 (375)
T PRK04260 209 TGMGRTG--KLYAFEHYGI-----EPD----IFTLAKGLA-NGVPVGAMLAK-SSLGGAFGYGSHGSTFGGNKLSMAAAS 275 (375)
T ss_pred hCCCccc--chhhhHhhCC-----CCC----EEEeccccc-CCcceEEEEEc-HHHHhhcCCCCCCCCCCcCHHHHHHHH
Confidence 8743322 2222111111 223 338999998 89999999995 55555543211 12345788888888
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEee
Q 011570 320 TMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVG-IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVS 398 (483)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 398 (483)
+++..... .++.++.++..+..++.+.+.+.+.+ +.... ..|+++|++++.. ...+.+.+. ++||.+.
T Consensus 276 a~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~~--------~~~~~~~l~-~~Gi~v~ 344 (375)
T PRK04260 276 ATLDIMLT-AGFLEQALENGNYLQEQLQKALQDKETVTTVR-GLGYMIGIETTAD--------LSQLVEAAR-DKGLIVL 344 (375)
T ss_pred HHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEe-ccceEEEEEecCc--------HHHHHHHHH-hCCCEEe
Confidence 88865432 34566666777777777877777664 33233 3678999998431 225666666 4699998
Q ss_pred CCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHH
Q 011570 399 PGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSF 433 (483)
Q Consensus 399 pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~ 433 (483)
|+ +.+.+|+++.. .+++++++++++|+++
T Consensus 345 ~~------~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 345 TA------GTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred cC------CCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 65 23679999944 6999999999999875
No 203
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.87 E-value=1.1e-19 Score=183.59 Aligned_cols=291 Identities=15% Similarity=0.155 Sum_probs=189.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh--------------cCCCCeEEEeCCCCcChHHHHh
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL--------------ADPGDAFLVPTPYYPGFDRDLR 161 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l--------------~~~gd~Vlv~~P~y~~~~~~~~ 161 (483)
+.+|.+++|+|++ .+..++.+.+..+...++.+| .+++|.|++..-+|......++
T Consensus 149 h~~LE~~LA~f~g----------~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ 218 (476)
T PLN02955 149 HRLLESSLADLKK----------KEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVR 218 (476)
T ss_pred HHHHHHHHHHHHC----------CCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHH
Confidence 5789999999986 344455555555555555555 3567788888889998888877
Q ss_pred hhc---CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEc
Q 011570 162 WRT---GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCD 238 (483)
Q Consensus 162 ~~~---G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~D 238 (483)
... +++++.++. -|++.|++.++... .+.+.|++..--++.|.+.+ +.+|.++|++||.++|+|
T Consensus 219 ls~~~~~a~~~~f~H-------ND~~~Le~~L~~~~---~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVD 285 (476)
T PLN02955 219 LAERQGNVEVFVYRH-------CDMYHLNSLLSSCK---MKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVID 285 (476)
T ss_pred hccccCCceEEEeCC-------CCHHHHHHHHHhCC---CCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEc
Confidence 531 466666663 37899999987642 12344444444789999999 777788888999999999
Q ss_pred cccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh-c--CCCChHHH
Q 011570 239 EIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS-F--GLVSSQTQ 315 (483)
Q Consensus 239 eay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~-~--~~~s~~~q 315 (483)
|+|+.++++. .. ........ ...+.+|+++||||++|..| ||+++ ++.+.+.++.... + ....++..
T Consensus 286 EAH~~Gv~G~-~G-~G~~e~~g----~~~di~ii~~TLsKA~G~~G---Gfi~g-s~~~~~~l~~~~~~~ifStalpp~~ 355 (476)
T PLN02955 286 DAHGTFVCGE-NG-GGVAEEFN----CEADVDLCVGTLSKAAGCHG---GFIAC-SKKWKQLIQSRGRSFIFSTAIPVPM 355 (476)
T ss_pred ccccCceecC-CC-CcHHHHhC----CCCCCcEEEEeCccchhccC---ceeec-HHHHHHHHHHhCCCCeecccccHHH
Confidence 9999776664 22 23333221 02467899999999998777 99998 4556666654332 2 22222222
Q ss_pred H-HHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcC
Q 011570 316 H-LIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVK 394 (483)
Q Consensus 316 ~-~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~g 394 (483)
. ++.+.+. .++. ...+++++.++.+++.+. .|+.+ +...+.+.+... .....+++.|++ .|
T Consensus 356 aaa~laal~---l~~~-~~~~r~~L~~n~~~fr~~---~G~~~----~sPI~pI~ig~~------~~a~~~~~~L~~-~G 417 (476)
T PLN02955 356 AAAAYAAVV---VARK-EKWRRKAIWERVKEFKAL---SGVDI----SSPIISLVVGNQ------EKALKASRYLLK-SG 417 (476)
T ss_pred HHHHHHHHH---HHhc-CHHHHHHHHHHHHHHHHh---cCCCC----CCCEEEEEeCCH------HHHHHHHHHHHH-CC
Confidence 2 2222221 1111 123456677777777763 36553 134555555432 224467777775 59
Q ss_pred eEeeCCCCCCCC-CCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 395 LNVSPGSSFHCP-NPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 395 V~v~pg~~f~~~-~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
|.+.+......+ +...+||++.. .++++++.+++.|.+++...
T Consensus 418 i~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~ 462 (476)
T PLN02955 418 FHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFD 462 (476)
T ss_pred CEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhh
Confidence 999887665543 33579999966 69999999999998875544
No 204
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.87 E-value=3.3e-20 Score=185.36 Aligned_cols=294 Identities=13% Similarity=0.151 Sum_probs=187.2
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh-cCc
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR-TGV 166 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-~G~ 166 (483)
.+|+.+ ...+|++++|++.+ .+++++++|+++++.+++. ++++||+|+++.+.|+.....+... ...
T Consensus 49 ~R~~~p-~~~~le~~lA~leg----------~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~ 116 (364)
T PRK07269 49 TRTKNP-TRAKLEETLAAIES----------ADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEG 116 (364)
T ss_pred eCCCCc-cHHHHHHHHHHHhC----------CCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcC
Confidence 345544 36899999999964 5799999999999999984 6799999999999998765543322 011
Q ss_pred EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCcc
Q 011570 167 QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVF 246 (483)
Q Consensus 167 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~ 246 (483)
.+ .+ .|..|++.+++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+
T Consensus 117 ~~-~~------~~~~d~~~l~~~i~~------~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~ 180 (364)
T PRK07269 117 RF-HF------TYANTEEELIAAIEE------DTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIY 180 (364)
T ss_pred cE-EE------EecCCHHHHHHhcCc------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc
Confidence 11 11 234688999998864 7899999999999999987 88889999999999999999854322
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHhhhc-C-CCChHHHHHHHHhcC
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKMSSF-G-LVSSQTQHLIATMLS 323 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~~~~-~-~~s~~~q~~~~~~l~ 323 (483)
. . ++ .. ...+++.|++|.++-.| .=.|+++++++.+.+.+...... + .++++....+..-|+
T Consensus 181 ~--~---pl-~~---------gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~ 245 (364)
T PRK07269 181 Q--R---PI-EL---------GADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLK 245 (364)
T ss_pred C--C---ch-hh---------CCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC
Confidence 1 1 11 11 33478899999986323 23578888666666655443332 2 345555555545554
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cc-eee-cCCceEEEeeecCchhhccChHHHH---HHHHHHHHhcCeEe
Q 011570 324 DDQFVEKFIAESAKRIAERHKAFTWGLSQV-GI-GCL-KSNAGLFLWMDLHHLLKEQTYEAEM---ALWRVIINEVKLNV 397 (483)
Q Consensus 324 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi-~~~-~~~~g~f~~~~l~~~~~~~~~~~~~---~~~~~Ll~~~gV~v 397 (483)
. +..+.++..++...+.+.|+++ ++ .+. |+.||++. +.+........+.+.. .++..|.....+.+
T Consensus 246 t-------L~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~s-f~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~~ 317 (364)
T PRK07269 246 T-------LSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMIS-FKVADETRIPHILNSLKVFTFAESLGGVESLIT 317 (364)
T ss_pred c-------HHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEE-EEECCHHHHHHHHHhCCcceEccCCCCcCeEee
Confidence 4 3444555567777788888876 33 344 67777554 4443210000000000 11222222335556
Q ss_pred eCCCCCCCC-----------CCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 398 SPGSSFHCP-----------NPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 398 ~pg~~f~~~-----------~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
.|++.+... .++.||||+|. |+.+.+++.|.++++
T Consensus 318 ~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGl---E~~~dli~dl~~al~ 363 (364)
T PRK07269 318 YPTTQTHADIPAEVRHSYGLTDDLLRLSIGI---EDARDLIADLKQALE 363 (364)
T ss_pred CCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHhc
Confidence 665443221 24679999984 456667777776653
No 205
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.87 E-value=1.1e-19 Score=183.19 Aligned_cols=291 Identities=16% Similarity=0.184 Sum_probs=179.1
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecC
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCD 174 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~ 174 (483)
-+.++++.+|++++ .++.+++++|+. ++..+...+.++||.|++..-.|......++.. ....+.++
T Consensus 57 ~~~~~e~~la~~~~---------~~~~l~~~sG~~-a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~-~~~~~~~~-- 123 (370)
T PRK05937 57 LLDDLEHKIAHFHG---------APEAFIVPSGYM-ANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVI-SGWHQSFR-- 123 (370)
T ss_pred HHHHHHHHHHHHhC---------CCeEEEECChHH-HHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHc-CCceEEec--
Confidence 36788999999886 234477777765 444555666778898888888888888877765 33333343
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcch
Q 011570 175 SSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVS 254 (483)
Q Consensus 175 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s 254 (483)
..|+++|++.++.....++++++|++++++|+||.+.| +++|.++|+++|+++++||+|+...+.. . ...
T Consensus 124 -----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~-~-g~g 193 (370)
T PRK05937 124 -----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGD-D-GKG 193 (370)
T ss_pred -----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCC-C-CCc
Confidence 25899999998754322234567788999999999999 7788888999999999999998544433 1 111
Q ss_pred HHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHH-Hhhhc---CCCChHHHHHHHHhcCChhHHHH
Q 011570 255 IAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCAR-KMSSF---GLVSSQTQHLIATMLSDDQFVEK 330 (483)
Q Consensus 255 ~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~-~~~~~---~~~s~~~q~~~~~~l~~~~~~~~ 330 (483)
...... ..+..+++.||||.+|..|. | +++. +.+...+. ...++ ...+++...++.+++. ++.+
T Consensus 194 ~~~~~~-----~~~~~~~~~tlsK~~g~~G~--~-vl~~-~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~---~l~~ 261 (370)
T PRK05937 194 FCHSLG-----YENFYAVLVTYSKALGSMGA--A-LLSS-SEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYD---FLSQ 261 (370)
T ss_pred hHHhhC-----CCCCcEEEEechhhhhcCce--E-EEcC-HHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHH---HHHh
Confidence 111111 11223568899999997773 3 4443 33333322 22222 2244444443333332 1111
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCE
Q 011570 331 FIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGW 410 (483)
Q Consensus 331 ~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~ 410 (483)
.....++++.+.++++.+.|...+. + ....+.++.. . ...+.+.| .++||.+.... .+..++
T Consensus 262 ~~~~~~~~l~~l~~~l~~~l~~~~~------~-~~~~i~~~~~------~-~~~~~~~L-~~~gi~v~~~~---~~~~~~ 323 (370)
T PRK05937 262 EGELARKQLFRLKEYFAQKFSSAAP------G-CVQPIFLPGI------S-EQELYSKL-VETGIRVGVVC---FPTGPF 323 (370)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCCC------C-CEEEEEeCCh------h-HHHHHHHH-HHCCeeEEeeC---CCCCCE
Confidence 1223445667777777777754321 1 1112233321 1 22455555 45699887422 123468
Q ss_pred EEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 411 FRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 411 iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+|++++. .++++++.+++.|++++++..
T Consensus 324 iRis~~~~~t~edid~l~~~L~~~~~~~~ 352 (370)
T PRK05937 324 LRVNLHAFNTEDEVDILVSVLATYLEKYQ 352 (370)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 9999976 599999999999999887654
No 206
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=1.6e-19 Score=181.23 Aligned_cols=215 Identities=13% Similarity=0.139 Sum_probs=154.0
Q ss_pred cCCCC--CCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH----hh
Q 011570 89 IFQDY--HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----RW 162 (483)
Q Consensus 89 ~Y~~~--~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----~~ 162 (483)
.|+.. ++...|+++||++.+ .+++++++|+++|+..++.+++++||+|++++|.|+++...+ ..
T Consensus 54 ~Y~r~~npt~~~Le~~iA~le~----------~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~ 123 (394)
T PRK09028 54 FYGRRGTPTHFAFQAAIVELEG----------GAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKG 123 (394)
T ss_pred eecCCCCchHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhh
Confidence 46553 235699999998854 357899999999999999999999999999999998776543 33
Q ss_pred hcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccc
Q 011570 163 RTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYA 242 (483)
Q Consensus 163 ~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~ 242 (483)
.|+++..++.+ +.+.+++++.+ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|+
T Consensus 124 -~Gi~v~~v~~~-------~~e~l~~~l~~------~TklV~lespsNPtg~v~d---l~~I~~la~~~g~~lvvD~t~a 186 (394)
T PRK09028 124 -FGIETTYYDPM-------IGEGIRELIRP------NTKVLFLESPGSITMEVQD---VPTLSRIAHEHDIVVMLDNTWA 186 (394)
T ss_pred -cceEEEEECCC-------CHHHHHHhcCc------CceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCcc
Confidence 38887766532 45677777753 7999999999999988755 8999999999999999999997
Q ss_pred cCccCCCCCcchHHHhhhhccccCCCeEEEEecCcccc-CCCCceEEEEEecChHHHHHHHHhh-hcC-CCChHHHHHHH
Q 011570 243 ATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDM-GFPGFRVGIIYSYNDQVVSCARKMS-SFG-LVSSQTQHLIA 319 (483)
Q Consensus 243 ~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~li~~~~~l~~~~~~~~-~~~-~~s~~~q~~~~ 319 (483)
... .. . ++ ..+..+++.|.+|.+ |-.++..|+++. ++.+.+.+.... ..+ .+++.....+.
T Consensus 187 ~p~-~~-~---Pl----------~~GaDivv~S~tK~l~Gh~d~~~G~~~~-~~~~~~~l~~~~~~~G~~~~p~~a~l~~ 250 (394)
T PRK09028 187 SPI-NS-R---PF----------EMGVDISIQAATKYIVGHSDVMLGTATA-NEKHWDQLREHSYLMGQCTSPDDVYLAM 250 (394)
T ss_pred ccc-cC-C---cc----------ccCceEEEEeCCeEecCCCCEEEEEEEC-CHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 432 11 1 11 225568899999998 445578888776 444444333222 222 34555544444
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 320 TMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
.-++. +.-+.++..++...+.+.|+++
T Consensus 251 rgl~T-------L~lR~~~~~~na~~la~~L~~~ 277 (394)
T PRK09028 251 RGLRT-------LGVRLAQHEKNALKVANWLATR 277 (394)
T ss_pred cccCc-------HHHHHHHHHHHHHHHHHHHhcC
Confidence 44443 3445556677778888888887
No 207
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.87 E-value=1.4e-19 Score=184.52 Aligned_cols=164 Identities=20% Similarity=0.225 Sum_probs=130.1
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH----Hhhh
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD----LRWR 163 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~ 163 (483)
.+|+.+. ..+|++.+|++++ .+..++++++++++..++.+++++||+|+++.|.|++.... +...
T Consensus 52 sr~~~p~-~~~le~~lA~l~g----------~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~ 120 (418)
T TIGR01326 52 SRLMNPT-TDVLEQRIAALEG----------GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRL 120 (418)
T ss_pred ECCCChh-HHHHHHHHHHHhC----------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHc
Confidence 3454433 5788889988875 24678899999999999999999999999999999654433 3444
Q ss_pred cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 164 TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 164 ~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
|++++.++.+ |++.+++++.+ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.
T Consensus 121 -G~~v~~v~~~-------d~~~l~~~l~~------~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~ 183 (418)
T TIGR01326 121 -GIEVRFVDPD-------DPEEFEKAIDE------NTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFAT 183 (418)
T ss_pred -CcEEEEECCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCch
Confidence 9999888742 78889888854 7899999999999999998 77888889999999999999964
Q ss_pred CccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecC
Q 011570 244 TVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYN 294 (483)
Q Consensus 244 ~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~ 294 (483)
.. .. . + + ..+.++++.|+||.+|.+|+|+||+++++
T Consensus 184 ~~-~~-~---~---l-------~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 184 PY-LC-R---P---I-------DHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred hh-cC-C---c---h-------hcCCeEEEECccccccCCccceEEEEEec
Confidence 21 11 1 1 1 12467899999999998999999999854
No 208
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.87 E-value=5e-20 Score=187.89 Aligned_cols=286 Identities=15% Similarity=0.115 Sum_probs=184.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC---------CC-CeEEEeCCCCcChHHHHhhhcC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD---------PG-DAFLVPTPYYPGFDRDLRWRTG 165 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~---------~g-d~Vlv~~P~y~~~~~~~~~~~G 165 (483)
..+|.+.++++.+ .+.+++++++++|+..++.++.. +| +.|++..-+|.+....+... +
T Consensus 85 ~~~l~~~l~~~~~----------~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~-~ 153 (401)
T PRK00854 85 LAPLYEELAALTG----------SHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGF-S 153 (401)
T ss_pred HHHHHHHHHhhCC----------CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhc-c
Confidence 3455555555432 35899999999999999988742 23 67888877776543322221 1
Q ss_pred c-------------EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCH-HHHHHHHHHHhhc
Q 011570 166 V-------------QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDR-ETLKDIVSFINEK 231 (483)
Q Consensus 166 ~-------------~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~-~~l~~i~~~a~~~ 231 (483)
. .+..++. .|++.+++++.+ ++++|++++|+||+|.+++. +.+++|.++|++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~i~~------~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~ 220 (401)
T PRK00854 154 TDPDARGGFGPFTPGFRVVPF-------GDAEALEAAITP------NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTAN 220 (401)
T ss_pred CCccccccCCCCCCCeEEeCC-------CCHHHHHHHhCC------CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 1 1222221 378999988853 78999999999999999974 4699999999999
Q ss_pred CcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh--cCC
Q 011570 232 NIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS--FGL 309 (483)
Q Consensus 232 ~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~--~~~ 309 (483)
|+++|+||+|.++.+.+ . +... .... . .++.+ .+||.++...+|+||++++ +++.+.+..... .+.
T Consensus 221 gi~lI~DEv~~g~g~~g-~-~~~~-~~~g-~---~~D~~----~~~K~l~gg~~~ig~v~~~-~~~~~~l~~~~~~~t~~ 288 (401)
T PRK00854 221 NVTLILDEIQTGLGRTG-K-LLAE-EHEG-I---EADVT----LIGKALSGGFYPVSAVLSN-SEVLGVLKPGQHGSTFG 288 (401)
T ss_pred CCEEEEechhhCCCCCc-h-HhHH-hhcC-C---CCCEE----EecccccCCccCeEEEEEc-HHHHhcccCCCCCCCCC
Confidence 99999999998643332 1 1111 1111 0 12322 2479997333799999994 555554432211 123
Q ss_pred CChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCce---eecCCceEEEeeecCchhhccChHHHHHHH
Q 011570 310 VSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIG---CLKSNAGLFLWMDLHHLLKEQTYEAEMALW 386 (483)
Q Consensus 310 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~---~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~ 386 (483)
.+++.+.++.+.|+.. ++ ....+.++++.+++.+.|++++.. ...+.|. ++.+.+... . ....+++
T Consensus 289 ~~~~~~aa~~a~L~~l---~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~-~~~i~~~~~--~---~~~~~~~ 357 (401)
T PRK00854 289 GNPLACAVARAALKVL---TE--EGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGL-MLAVELEPE--A---GGARQYC 357 (401)
T ss_pred cCHHHHHHHHHHHHHH---HH--cCHHHHHHHHHHHHHHHHHhhccCceEEEeccce-EEEEEEecC--c---hhHHHHH
Confidence 5777887777776431 11 224566677778888888876432 2234454 444444221 0 1234778
Q ss_pred HHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHH
Q 011570 387 RVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFML 435 (483)
Q Consensus 387 ~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~ 435 (483)
+.|++ +||.+.+. ..+++|+++.. .+++++++++++|++++.
T Consensus 358 ~~L~~-~GV~v~~~------~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 358 EALKE-RGLLAKDT------HDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred HHHHH-CCeEEecC------CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 88876 59998653 23689999854 599999999999998764
No 209
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.86 E-value=2e-19 Score=183.48 Aligned_cols=285 Identities=14% Similarity=0.072 Sum_probs=176.1
Q ss_pred CcEEEeCChhHHHHHHHHHhc----------CCCCeEEEeCCCCcChHHHHhhhcCcEEEE---eecCCC--CCcccCHH
Q 011570 120 DRIVMSGGATGAHETVAFCLA----------DPGDAFLVPTPYYPGFDRDLRWRTGVQLVP---VVCDSS--NDFKVTME 184 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~----------~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~---v~~~~~--~~~~~d~~ 184 (483)
+.+++++++++++..++..+. ..++.|++.+-+|.+.........+..... .+.... .-...|++
T Consensus 89 ~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 168 (400)
T PTZ00125 89 DKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVE 168 (400)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHH
Confidence 688999999999999998763 134778888888766543322221211100 010000 00013789
Q ss_pred HHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCC-HHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhcc
Q 011570 185 ALEAAYEKAQESNIRIKGVLITNPSNPLGTFLD-RETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDI 263 (483)
Q Consensus 185 ~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~-~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~ 263 (483)
.+++.++. .++++|++..++||||.+++ .+.+++|.++|++||+++|+||+|.++.+.+ .. ... .... .
T Consensus 169 ~le~~l~~-----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G-~~-~~~-~~~~-~- 238 (400)
T PTZ00125 169 ALEKLLQD-----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTG-KL-LAH-DHEG-V- 238 (400)
T ss_pred HHHHHhCC-----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-hh-hHH-HhcC-C-
Confidence 99988852 37889988888999999986 5569999999999999999999997643333 21 111 1111 0
Q ss_pred ccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHH
Q 011570 264 ACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAE 341 (483)
Q Consensus 264 ~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~ 341 (483)
.++ ++ ++||.++.+++|+||++++ +.+.+.+.... .....+++++.++.+.++.-. +. ...+++++
T Consensus 239 --~pd-~~---~~sK~l~~g~~~ig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~--~~---~~~~~~~~ 306 (400)
T PTZ00125 239 --KPD-IV---LLGKALSGGLYPISAVLAN-DDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLK--EE---KLAENAQR 306 (400)
T ss_pred --CCC-EE---EEcccccCCCcCcEEEEEc-HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH--hc---CHHHHHHH
Confidence 122 22 5789998433599999994 55555543221 123356777777665543210 00 11122233
Q ss_pred HHHHHHHhhhc----CCc-eeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEec
Q 011570 342 RHKAFTWGLSQ----VGI-GCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFA 416 (483)
Q Consensus 342 ~~~~l~~~L~~----~gi-~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~ 416 (483)
+.+++.+.|.+ .++ ....+ .|.++|+.++... . ....+++..|+ ++||.+.|+. .+++||++.
T Consensus 307 ~~~~l~~~l~~l~~~~~~~~~~~~-~g~~~~v~~~~~~---~-~~~~~~~~~l~-~~Gv~v~~~~------~~~lRi~~~ 374 (400)
T PTZ00125 307 LGEVFRDGLKELLKKSPWVKEIRG-KGLLNAIVFDHSD---G-VNAWDLCLKLK-ENGLLAKPTH------DNIIRFAPP 374 (400)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEec-ccEEEEEEEccCc---c-hHHHHHHHHHH-HCCeEEeecC------CCEEEEECC
Confidence 33444444433 333 22333 4678888876311 1 12346778877 5699998752 468999975
Q ss_pred c-CCHHHHHHHHHHHHHHHHHhh
Q 011570 417 N-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 417 ~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
. .+++++++++++|.+++++..
T Consensus 375 ~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 375 LVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHh
Confidence 4 699999999999999988764
No 210
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.86 E-value=1.5e-20 Score=183.41 Aligned_cols=166 Identities=20% Similarity=0.265 Sum_probs=131.7
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS 175 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~ 175 (483)
+.++++.+|++++ ..+.+++|+|+++++..++.++++|||+|+++.|+|..+...+... |++++.++.+.
T Consensus 61 i~~~~~~~A~~~g---------a~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~-g~~~~~v~~~~ 130 (294)
T cd00615 61 IKEAQELAARAFG---------AKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLS-GAVPVYLKPER 130 (294)
T ss_pred HHHHHHHHHHHhC---------CCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHC-CCEEEEecCcc
Confidence 6788999999876 2345666999999999999999999999999999999988888875 99999887754
Q ss_pred CCC----cccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC-ccCCCC
Q 011570 176 SND----FKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT-VFTKES 250 (483)
Q Consensus 176 ~~~----~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~-~~~~~~ 250 (483)
+.+ ..+|++.+++++++ ++++++|++++| ||||.+++ +++|+++|+++|+++|+||+|+.. .|.+ .
T Consensus 131 ~~~~~~~~~i~~~~l~~~l~~----~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~-~ 201 (294)
T cd00615 131 NPYYGIAGGIPPETFKKALIE----HPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHP-I 201 (294)
T ss_pred CcccCcCCCCCHHHHHHHHHh----CCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCc-c
Confidence 433 36899999999864 246899999999 79999998 788999999999999999999753 2332 1
Q ss_pred CcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEE
Q 011570 251 SFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIY 291 (483)
Q Consensus 251 ~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li 291 (483)
...+.. ..+.++++.|++|++ +|++.|+++
T Consensus 202 ~~~~~~---------~~~~div~~S~hK~l--~g~~~~~~l 231 (294)
T cd00615 202 LPSSAA---------MAGADIVVQSTHKTL--PALTQGSMI 231 (294)
T ss_pred cCcchh---------hcCCcEEEEchhccc--chHhHHHHH
Confidence 111211 236678899999975 788876544
No 211
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.86 E-value=1.5e-19 Score=175.46 Aligned_cols=299 Identities=19% Similarity=0.230 Sum_probs=214.2
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHH--hcC----CCCeEEEeCCCCcChHHHHhhh--cCcE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFC--LAD----PGDAFLVPTPYYPGFDRDLRWR--TGVQ 167 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~--l~~----~gd~Vlv~~P~y~~~~~~~~~~--~G~~ 167 (483)
..+.|+.||+.++ +++++|++|+|++|+.++++.. ... .|.+|+++.--|+...+.++.+ .|.+
T Consensus 46 ve~AR~~iA~llg--------a~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~ 117 (386)
T COG1104 46 VEEAREQIAKLLG--------ADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFE 117 (386)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCe
Confidence 5677888888877 6789999999999999999876 222 4789999999999998888765 4999
Q ss_pred EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccC
Q 011570 168 LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFT 247 (483)
Q Consensus 168 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~ 247 (483)
+.++|++.+| .+|+++|+++|++ ++.+|-+...||-||++-| +++|.++|+++++++++|-+.+ ++
T Consensus 118 Vtyl~V~~~G--~v~~e~L~~al~~------~T~LVSim~aNnE~G~IQp---I~ei~~i~k~~~i~fHvDAvQa---~G 183 (386)
T COG1104 118 VTYLPVDSNG--LVDLEQLEEALRP------DTILVSIMHANNETGTIQP---IAEIGEICKERGILFHVDAVQA---VG 183 (386)
T ss_pred EEEeCCCCCC--eEcHHHHHHhcCC------CceEEEEEecccCeeeccc---HHHHHHHHHHcCCeEEEehhhh---cC
Confidence 9999998754 8999999999985 7889999999999999999 8888899999999999999987 44
Q ss_pred CCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHH-HHH-----HhhhcCCCChHHHHHHHHh
Q 011570 248 KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVS-CAR-----KMSSFGLVSSQTQHLIATM 321 (483)
Q Consensus 248 ~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~-~~~-----~~~~~~~~s~~~q~~~~~~ 321 (483)
. -+ ..+..+ ...+...|-+|..|..| +|.++..+..-.. .+. .-...++.+.+...+.+.+
T Consensus 184 k-ip-i~~~~~---------~vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A 250 (386)
T COG1104 184 K-IP-IDLEEL---------GVDLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKA 250 (386)
T ss_pred c-ee-cccccc---------CcceEEeehhhccCCCc--eEEEEECCCCccCceeccCcCCCCCCCCCccHHHHHHHHHH
Confidence 3 22 222221 23345568899999888 8988874322111 110 0011234455555555555
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC--CceeecC---CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeE
Q 011570 322 LSDDQFVEKFIAESAKRIAERHKAFTWGLSQV--GIGCLKS---NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLN 396 (483)
Q Consensus 322 l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--gi~~~~~---~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~ 396 (483)
++.. .+.++....++...|+++.+.|.+. ++.+... .-...+.+.++.. . .+.....|+.+||.
T Consensus 251 ~~~a---~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv-~-------gE~ll~~L~~~gI~ 319 (386)
T COG1104 251 AEIA---VEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGV-E-------GESLLLALDLAGIA 319 (386)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCC-c-------HHHHHHhccccCeE
Confidence 4321 2334556677788889999999865 3333321 1222344445531 1 13344456677999
Q ss_pred eeCCCCCCCCC-----------------CCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhhc
Q 011570 397 VSPGSSFHCPN-----------------PGWFRVCFAN-MDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 397 v~pg~~f~~~~-----------------~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
+..|+.|.... .+.+||||+. .++++++.+++.|++++++.++.
T Consensus 320 vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~ 381 (386)
T COG1104 320 VSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLREL 381 (386)
T ss_pred EeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 99999987531 2569999987 59999999999999999998765
No 212
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=7.2e-19 Score=179.26 Aligned_cols=156 Identities=22% Similarity=0.282 Sum_probs=124.9
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH----HhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD----LRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~~G~~~~~v 171 (483)
...|.+.+|++.+ .+..++++|+++++..++.+++++||+|+++.+.|+..... ++. .|++++.+
T Consensus 66 ~~~Le~~lA~leg----------~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~-~Gv~v~~v 134 (431)
T PRK08248 66 TDVFEKRIAALEG----------GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPK-LGITVKFV 134 (431)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHh-CCEEEEEE
Confidence 4678888888764 35778899999999999999999999999999999764433 344 49999888
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+. .|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|++||+|++|+.. +..
T Consensus 135 d~-------~d~e~l~~ai~~------~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~-~~~--- 194 (431)
T PRK08248 135 DP-------SDPENFEAAITD------KTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASP-YLL--- 194 (431)
T ss_pred CC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCcc-ccC---
Confidence 75 278889888853 7899999999999999999 678888899999999999998631 111
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEec
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSY 293 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~ 293 (483)
.++ . .+..+++.|++|.+|.+|.++|++++.
T Consensus 195 -~pl-~---------~gaDivv~S~tK~lgg~g~~~Gg~v~~ 225 (431)
T PRK08248 195 -RPI-E---------HGADIVVHSATKFIGGHGTSIGGVIVD 225 (431)
T ss_pred -Chh-H---------cCCCEEEEcCccccCCCCCceEEEEEe
Confidence 121 1 255688899999999999999988773
No 213
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.86 E-value=4.6e-19 Score=183.78 Aligned_cols=318 Identities=14% Similarity=0.169 Sum_probs=200.1
Q ss_pred cccC---CCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHH--HH-HhcCCCC----eEEEeCCCCcCh
Q 011570 87 IAIF---QDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETV--AF-CLADPGD----AFLVPTPYYPGF 156 (483)
Q Consensus 87 ~~~Y---~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~--~~-~l~~~gd----~Vlv~~P~y~~~ 156 (483)
.+.| +...|..++++++++++.+.+| ++...+..++|+++.+..+ +. .+.++|| +|+++.|+|+.+
T Consensus 99 ~tpYq~e~~sqG~lel~~~~~~~la~l~G----~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~ 174 (481)
T PRK04366 99 LHPLQPEETVQGALELMYELQEWLKEITG----MDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTN 174 (481)
T ss_pred CCCCCChhhhhHHHHHHHHHHHHHHHHhC----CCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhH
Confidence 3456 3456888999999999999887 4445566667766665533 22 3467776 999999999999
Q ss_pred HHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEE
Q 011570 157 DRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLV 236 (483)
Q Consensus 157 ~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI 236 (483)
...+... |++++.++++. ++.+|++.|++++.+ ++++|++++|| |||.+ .+++++|+++|+++|++++
T Consensus 175 ~~~~~~~-G~~vv~v~~~~--~~~~D~e~L~~~i~~------~t~~V~v~~Pn-~tG~~--~~dl~eI~~~a~~~gal~i 242 (481)
T PRK04366 175 PASAAMA-GFKVVEIPSNE--DGLVDLEALKAAVGE------DTAALMLTNPN-TLGLF--ERNILEIAEIVHEAGGLLY 242 (481)
T ss_pred HHHHHHc-CCEEEEeecCC--CCCcCHHHHHhhccc------CCeEEEEeCCC-Ccccc--chHHHHHHHHHHHcCCEEE
Confidence 9888775 99999999863 568999999998854 78999999998 99964 3469999999999999999
Q ss_pred EccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC----CceEEEEEecChHHHHHHHHh------hh
Q 011570 237 CDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP----GFRVGIIYSYNDQVVSCARKM------SS 306 (483)
Q Consensus 237 ~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~----GlRiG~li~~~~~l~~~~~~~------~~ 306 (483)
+|.++....... .+.. ..+..++++|.+|.+|.| |--+|++.+. +.+.+.+... ..
T Consensus 243 VD~a~~~~~~g~----~~~~---------~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~-~~~~~~lp~~~v~~~g~~ 308 (481)
T PRK04366 243 YDGANLNAILGK----ARPG---------DMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVK-EELAPFLPVPVVEKDGDR 308 (481)
T ss_pred EEecChhhhccc----CCcc---------ccCCCEEEEechhhcCCCCCCCCCCeeeeeeh-hhhHhhCCCCeeeccCCc
Confidence 999985211111 1111 224567888999998644 4557888874 3333322100 00
Q ss_pred c---------------CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeec
Q 011570 307 F---------------GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDL 370 (483)
Q Consensus 307 ~---------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l 370 (483)
+ +..+.....++..++...+ .+-+++..++...+.+++.+.|.++ .+.+..+...- +.++.
T Consensus 309 ~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G--~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-~~~~~ 385 (481)
T PRK04366 309 YRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLG--AEGLREVSEDAVLNANYLKARLKDIYDLPYDRPCMHE-FVLSG 385 (481)
T ss_pred eeecccccccCCCcccccCchHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhHhhCcccCCCCeeEE-EEEEC
Confidence 0 0000111111111111111 1223444455566678888888875 33221111111 22333
Q ss_pred CchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhhcc
Q 011570 371 HHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVEAK 441 (483)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~~~ 441 (483)
+.. ..... ...++.++|.+ +||.+. +..|.....+.+|+++.. .++++++.+++.|+++.++..++.
T Consensus 386 ~~~-~~~g~-~~~~v~~~L~~-~Gi~~~-~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~~~ 453 (481)
T PRK04366 386 KKL-KETGV-RTLDIAKRLLD-YGFHPP-TIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEEAKENP 453 (481)
T ss_pred ccc-cccCC-CHHHHHHHHHH-CCccCC-ccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHhCc
Confidence 211 00011 13467777775 598755 222221125689999976 599999999999999988776653
No 214
>PLN02651 cysteine desulfurase
Probab=99.86 E-value=5.7e-20 Score=184.99 Aligned_cols=281 Identities=19% Similarity=0.190 Sum_probs=187.5
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh----cCCCCeEEEeCCCCcChHHHHhh--hcCcEEE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL----ADPGDAFLVPTPYYPGFDRDLRW--RTGVQLV 169 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l----~~~gd~Vlv~~P~y~~~~~~~~~--~~G~~~~ 169 (483)
..++|+.++++++ .++++|++|+|++++++.++..+ .++||+|++....|+.+...+.. ..|++++
T Consensus 45 ~~~~r~~la~~~g--------~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~ 116 (364)
T PLN02651 45 VEKARAQVAALIG--------ADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVT 116 (364)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEE
Confidence 3566777777765 56789999999999988776554 47899999999888765443322 2489999
Q ss_pred EeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC
Q 011570 170 PVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE 249 (483)
Q Consensus 170 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~ 249 (483)
.++.++ ++.+|++.+++++++ +++++++++++||||.+.+ +++|.++|+++|+++++|.+++. +.
T Consensus 117 ~v~~~~--~~~~d~~~l~~~i~~------~t~lv~v~~~~n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~---g~- 181 (364)
T PLN02651 117 YLPVKS--DGLVDLDELAAAIRP------DTALVSVMAVNNEIGVIQP---VEEIGELCREKKVLFHTDAAQAV---GK- 181 (364)
T ss_pred EEccCC--CCcCCHHHHHHhcCC------CcEEEEEECCCCCceeccc---HHHHHHHHHHcCCEEEEEcchhh---CC-
Confidence 998864 457899999999864 7899999999999999999 77888999999999999999973 22
Q ss_pred CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh--------hhcCCCChHHHHHHHHh
Q 011570 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM--------SSFGLVSSQTQHLIATM 321 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~--------~~~~~~s~~~q~~~~~~ 321 (483)
-+ ..+. ..+..+++.|..|.+|. ..+|+++..++.+....... ...++.+.....++.++
T Consensus 182 ~~-~~~~---------~~~~D~~~~s~hK~~gp--~G~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~a 249 (364)
T PLN02651 182 IP-VDVD---------DLGVDLMSISGHKIYGP--KGVGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAA 249 (364)
T ss_pred cc-cCcc---------cCCCCEEEechhhhCCC--CceEEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHH
Confidence 11 2221 12446778899996543 34899988553222110000 01233444444444444
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHhhhc-C-CceeecCCc-----eEEEeeecCchhhccChHHHHHHHHHHHHhcC
Q 011570 322 LSDDQFVEKFIAESAKRIAERHKAFTWGLSQ-V-GIGCLKSNA-----GLFLWMDLHHLLKEQTYEAEMALWRVIINEVK 394 (483)
Q Consensus 322 l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~-gi~~~~~~~-----g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~g 394 (483)
++- +.+..+..+++.++.++++.+.|.+ + |+++..+.. ...+.+.++. .+ ..++...|. +
T Consensus 250 l~~---~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~-~~------~~~~~~~L~-~-- 316 (364)
T PLN02651 250 CEL---AMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAY-VE------GESLLMGLK-E-- 316 (364)
T ss_pred HHH---HHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCC-CC------HHHHHHHhC-C--
Confidence 432 2223455567777788888888875 3 787775411 1244455542 11 225566553 3
Q ss_pred eEeeCCCCCCCC-----------------CCCEEEEEecc-CCHHHHH
Q 011570 395 LNVSPGSSFHCP-----------------NPGWFRVCFAN-MDDRTME 424 (483)
Q Consensus 395 V~v~pg~~f~~~-----------------~~~~iRis~~~-~~~e~l~ 424 (483)
|.++.|+.|... ..+.+|+|++. .|+++++
T Consensus 317 i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 317 VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 999999876443 13689999987 4777764
No 215
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=7.4e-19 Score=176.79 Aligned_cols=208 Identities=19% Similarity=0.268 Sum_probs=144.4
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH----HhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD----LRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~~G~~~~~v 171 (483)
...|++.+|++.+ ....+++++| +.++..++ .++++||+|+++.|+|+..... +.. .|++++.+
T Consensus 52 ~~~Le~~lA~l~g---------~~~~~~~~sG-~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~-~G~~v~~v 119 (377)
T PRK07671 52 RAALEELIAVLEG---------GHAGFAFGSG-MAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNR-FGIEHTFV 119 (377)
T ss_pred HHHHHHHHHHHhC---------CCceEEeCCH-HHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhc-CCeEEEEE
Confidence 5788888888876 2345666666 56777665 5789999999999999854432 233 38888887
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+. .|++.+++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....+..
T Consensus 120 ~~-------~d~~~l~~ai~~------~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~~--- 180 (377)
T PRK07671 120 DT-------SNLEEVEEAIRP------NTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQS--- 180 (377)
T ss_pred CC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccCC---
Confidence 63 378899988863 7899999999999999987 7788888899999999999997532221
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFV 328 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~ 328 (483)
++ .+ ...+++.|+||.+|-++ .-.|++++.++.+.+.+...+.. ...++.....+..-+. .
T Consensus 181 --p~-~~---------g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~---t- 244 (377)
T PRK07671 181 --PI-SL---------GADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGLK---T- 244 (377)
T ss_pred --hh-hh---------CCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCcC---h-
Confidence 11 12 33588999999997443 45677777666676666555544 2234433332222222 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 329 EKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 329 ~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
+..+.++..++...+.+.|+++
T Consensus 245 ---l~~R~~~~~~na~~la~~L~~~ 266 (377)
T PRK07671 245 ---LGIRMEEHETNSRAIAEFLNNH 266 (377)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHcC
Confidence 3445566677778888888876
No 216
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.85 E-value=7.8e-19 Score=176.80 Aligned_cols=289 Identities=18% Similarity=0.208 Sum_probs=183.9
Q ss_pred cCCCCCC--cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH----hh
Q 011570 89 IFQDYHG--LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----RW 162 (483)
Q Consensus 89 ~Y~~~~g--~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----~~ 162 (483)
.|....+ ..+|++.++++++ .++++++++++.++..++. ++++||+|+++.+.|+.+...+ ..
T Consensus 40 ~Y~r~~~p~~~~le~~la~l~g----------~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~ 108 (378)
T TIGR01329 40 DYTRSGNPTRTALESLLAKLDK----------ADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPR 108 (378)
T ss_pred ccCCCCChHHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHH
Confidence 4655421 3455555555543 2566777777789988776 7899999999999998776533 33
Q ss_pred hcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccc
Q 011570 163 RTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYA 242 (483)
Q Consensus 163 ~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~ 242 (483)
.|++++.++.. |++.+++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|.
T Consensus 109 -~G~~v~~vd~~-------d~~~le~~i~~------~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~ 171 (378)
T TIGR01329 109 -SGVVVVHVDTT-------DLDKVKAALGP------KTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMM 171 (378)
T ss_pred -cCcEEEEeCCC-------CHHHHHHhcCc------CceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCc
Confidence 49999988752 78889888853 7899999999999999998 8889999999999999999985
Q ss_pred cCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC-CCceEEEEEecChHHHHHHHHhhh-cC-CCChHHHHHHH
Q 011570 243 ATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF-PGFRVGIIYSYNDQVVSCARKMSS-FG-LVSSQTQHLIA 319 (483)
Q Consensus 243 ~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~-~GlRiG~li~~~~~l~~~~~~~~~-~~-~~s~~~q~~~~ 319 (483)
.. +.. .++ .+ ...+++.|++|.++- .+++.|++++.++.+.+.+..... .+ ..++.....+.
T Consensus 172 ~~-~~~----~~l-~~---------g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~ 236 (378)
T TIGR01329 172 SP-LLC----NPL-EL---------GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLL 236 (378)
T ss_pred cc-ccC----Chh-hc---------CCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHH
Confidence 32 111 122 11 234788999998753 358899999866666555554443 22 23443332222
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cc-eeec----------------CCceEEEeeecCchhhccChHH
Q 011570 320 TMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GI-GCLK----------------SNAGLFLWMDLHHLLKEQTYEA 381 (483)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi-~~~~----------------~~~g~f~~~~l~~~~~~~~~~~ 381 (483)
.-++. +..+.++..++...+.+.|+++ .+ .+.. ...|-.+.+++.. ...
T Consensus 237 ~~l~t-------l~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~------~~~ 303 (378)
T TIGR01329 237 RGIKT-------LAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS------VAL 303 (378)
T ss_pred ccCCC-------HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC------HHH
Confidence 22222 2333334455555566666554 22 1111 1122345566621 122
Q ss_pred HHHHHHHHHHhcCeEeeCCCCCCC---------------------CCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 382 EMALWRVIINEVKLNVSPGSSFHC---------------------PNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 382 ~~~~~~~Ll~~~gV~v~pg~~f~~---------------------~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
..+|+..| +..++.++-|..... -.++.||||+|. |+.+.+++.|++++++.
T Consensus 304 ~~~~~~~L-~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 304 SKRLVEAT-KLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI---EDVDDLISDLDIAFVTA 376 (378)
T ss_pred HHHHHHhC-cCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhc
Confidence 33666666 556777776654321 014689999984 45777777887777643
No 217
>PLN00144 acetylornithine transaminase
Probab=99.85 E-value=3.1e-19 Score=180.03 Aligned_cols=296 Identities=15% Similarity=0.109 Sum_probs=186.7
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc---CC------------CCeEEEeCCCCcChHHHHh
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA---DP------------GDAFLVPTPYYPGFDRDLR 161 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~---~~------------gd~Vlv~~P~y~~~~~~~~ 161 (483)
.+....+|+.+.+.. ..+.|++++++++++..++.... .. ..+|+....+|.+......
T Consensus 56 ~~~~~~la~~l~~~~------~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~ 129 (382)
T PLN00144 56 TIPQVELAKRLVASS------FADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGAL 129 (382)
T ss_pred CHHHHHHHHHHHhcC------CCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHH
Confidence 344556666665421 24689999999999998887542 10 2468999988877654433
Q ss_pred hhcCcEEEE---eecCCCC---CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCC--HHHHHHHHHHHhhcCc
Q 011570 162 WRTGVQLVP---VVCDSSN---DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLD--RETLKDIVSFINEKNI 233 (483)
Q Consensus 162 ~~~G~~~~~---v~~~~~~---~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~--~~~l~~i~~~a~~~~~ 233 (483)
...+-.... .|..... .| -|++.+++.+.. .++++|++..-+|| |.+++ .+.+++|.++|++||+
T Consensus 130 s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~~~~-----~~~aavi~eP~q~~-gg~~~~~~~~~~~l~~l~~~~g~ 202 (382)
T PLN00144 130 ALTSKEQYRTPFEPLMPGVTFVEY-GNLEAARKLIQK-----GKTAAVFVEPVQGE-GGIYPATKEFLQGLRALCDEAGA 202 (382)
T ss_pred hcCCCccccccCCCCCCCeEEeCC-CCHHHHHHhcCC-----CCeEEEEEccccCC-CCCccCCHHHHHHHHHHHHHcCC
Confidence 321211000 0100000 01 268888887742 35766665544889 44444 4559999999999999
Q ss_pred EEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH--hhhcCCCC
Q 011570 234 HLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK--MSSFGLVS 311 (483)
Q Consensus 234 ~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~--~~~~~~~s 311 (483)
++|+||+|.++...+ . +.+ ..+.. + .++ +.||||.++ +|+|+||++++ +.+.+.+.. ....+..+
T Consensus 203 llI~DEv~tg~gr~g-~-~~~-~~~~~-~---~PD----i~t~sK~l~-~G~pig~v~~~-~~~~~~~~~~~~~~T~~~~ 269 (382)
T PLN00144 203 LLVFDEVQCGLGRTG-Y-LWA-HEAYG-V---EPD----IMTLAKPLA-GGLPIGAVLVT-EKVASAINPGDHGSTFAGG 269 (382)
T ss_pred EEEEechhhCCCccc-h-Hhh-hhhcC-C---CCC----EEEeccccc-CCcceEEEEEc-HHHHhccCCCCCCCCCCCC
Confidence 999999998754443 2 222 11111 1 233 569999998 99999999994 555555432 11223467
Q ss_pred hHHHHHHH---HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHH
Q 011570 312 SQTQHLIA---TMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRV 388 (483)
Q Consensus 312 ~~~q~~~~---~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~ 388 (483)
++++.++. .++.++++ .+++++..+.++ +.+.+.+.+.+........|+++|+++.. . ...++..
T Consensus 270 pl~~aaa~a~l~~i~~~~~-~~~~~~~g~~l~---~~l~~~~~~~~~~~~vrg~G~~~~l~l~~--~------~~~~~~~ 337 (382)
T PLN00144 270 PLVCNAALAVLDKISKPGF-LASVAKKGEYLR---ELLRRKLGGNPHVKEVRGVGLLVGIQLDV--P------AGPLVDA 337 (382)
T ss_pred HHHHHHHHHHHHHHhhchH-HHHHHHHHHHHH---HHHHHHHhhCCCceeeecCceEEEEEecC--c------cHHHHHH
Confidence 88888777 55555443 445555555553 34444455543222222378999999831 1 1256666
Q ss_pred HHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 389 IINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 389 Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
++ ++||.+.|+. ..+.+|++++. .+++++++++++|.+++.+
T Consensus 338 ~~-~~Gv~i~~~~-----~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 338 CR-DSGLLVLTAG-----KGDVVRLVPPLVISEAELEQAVEILADCLPA 380 (382)
T ss_pred HH-HCCeEEeecC-----CCCEEEEeCCCccCHHHHHHHHHHHHHHHHh
Confidence 66 5699998872 13689999988 6999999999999999865
No 218
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.85 E-value=1.3e-18 Score=174.64 Aligned_cols=208 Identities=14% Similarity=0.103 Sum_probs=145.5
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH----hhhcCcEEEEee
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----RWRTGVQLVPVV 172 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----~~~~G~~~~~v~ 172 (483)
..|++.+|++.+ .+++++++|+++|+..++.+++++||+|++++|.|+.....+ .. .|+++..++
T Consensus 53 ~~lE~~lA~l~g----------~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~-~gi~v~~~d 121 (377)
T TIGR01324 53 FALQDAMCELEG----------GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKR-MGVDITYYD 121 (377)
T ss_pred HHHHHHHHHHhC----------CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHh-cCcEEEEEC
Confidence 589999998865 468999999999999999999999999999999998765432 33 388877664
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
.. +.+.+++++++ ++|+|++++|+||+|.+.+ +++|+++|+++|+++|+|++|+...+. .
T Consensus 122 ~~-------~~e~l~~~i~~------~tklV~lesp~Np~g~~~d---l~~I~~la~~~g~~livD~t~a~g~~~--~-- 181 (377)
T TIGR01324 122 PL-------IGEDIATLIQP------NTKVLFLEAPSSITFEIQD---IPAIAKAARNPGIVIMIDNTWAAGLLF--K-- 181 (377)
T ss_pred CC-------CHHHHHHhcCC------CceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCcccccc--C--
Confidence 32 22677777753 7899999999999988765 999999999999999999999743221 1
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCC-CCceEEEEEecChHHHHHHHHhhhcCC-CChHHHHHHHHhcCChhHHHH
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGF-PGFRVGIIYSYNDQVVSCARKMSSFGL-VSSQTQHLIATMLSDDQFVEK 330 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~-~GlRiG~li~~~~~l~~~~~~~~~~~~-~s~~~q~~~~~~l~~~~~~~~ 330 (483)
+ + ..+..++++|++|.+|- ++...|+++++++.+.........++. .++.....+..-++.
T Consensus 182 -p---l-------~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~t------ 244 (377)
T TIGR01324 182 -P---L-------EHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLRT------ 244 (377)
T ss_pred -c---c-------ccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhh------
Confidence 1 1 22456889999999863 347789998854433323223333332 344333333332222
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcC
Q 011570 331 FIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 331 ~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
+..+.++..++...+.+.|+++
T Consensus 245 -l~~R~~~~~~~a~~la~~L~~~ 266 (377)
T TIGR01324 245 -LGVRLKQHQESSLAIAKWLSEQ 266 (377)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhC
Confidence 3344555566666677777765
No 219
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=7.1e-19 Score=178.05 Aligned_cols=210 Identities=18% Similarity=0.191 Sum_probs=152.9
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH----HhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD----LRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~~G~~~~~v 171 (483)
...|.+.+|++.+ .+..+++++++.|+.+++.+++++||+|+++.++|.+.... +... |+++..+
T Consensus 63 v~~lE~~la~leg----------~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~-Gi~v~~v 131 (432)
T PRK06702 63 LAAFEQKLAELEG----------GVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKL-GIDVTFF 131 (432)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHC-CCEEEEE
Confidence 5778888888765 34578899999999999999999999999999999866554 4554 9998888
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
.. .+|++.++++|++ ++|+|++.+|+||++.+.+ +++|+++|+++|+++|+|++|+.- +.
T Consensus 132 d~------~~d~~~l~~~I~~------~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP-~~---- 191 (432)
T PRK06702 132 NP------NLTADEIVALAND------KTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATP-YL---- 191 (432)
T ss_pred CC------CCCHHHHHHhCCc------CCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCch-hh----
Confidence 53 3688999999874 8999999999999999999 889999999999999999998521 11
Q ss_pred cchHHHhhhhccccCCCeEEEEecCcc-----ccCCCCceE-----EEEEecChHHHH----------------------
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSK-----DMGFPGFRV-----GIIYSYNDQVVS---------------------- 299 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK-----~~g~~GlRi-----G~li~~~~~l~~---------------------- 299 (483)
... + ...-.|+++|+|| ..+++|+++ +|..+++..+..
T Consensus 192 -~~p--l-------~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 261 (432)
T PRK06702 192 -CQA--F-------EHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVK 261 (432)
T ss_pred -CCh--h-------hcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHH
Confidence 111 1 1244588999999 778899887 576553222221
Q ss_pred -HHHHhhhc-CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 300 -CARKMSSF-GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 300 -~~~~~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
.......+ ..++++....+..-|+.. ..+.++..++...+.+.|+++
T Consensus 262 ~~~~~~~~~g~~~sp~~a~l~~rgL~Tl-------~lR~~r~~~Na~~la~~L~~~ 310 (432)
T PRK06702 262 ARVQLLRDYGNCMSPFNAYISNIGLETL-------HLRMERHSENALAVAKWLADH 310 (432)
T ss_pred HHHHHHHHccCCCCHHHHHHHHhccCcH-------HHHHHHHHHHHHHHHHHHHhC
Confidence 11122333 335666666666666542 233334457777888888876
No 220
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=2.1e-18 Score=175.75 Aligned_cols=157 Identities=22% Similarity=0.263 Sum_probs=122.4
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh---cCcEEEEee
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR---TGVQLVPVV 172 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~---~G~~~~~v~ 172 (483)
..+|++.||++.+ .+..++++++++++..++.+++++||+|+++.+.|+.....+... .|+++..++
T Consensus 60 ~~~Le~~lA~l~g----------~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d 129 (425)
T PRK06084 60 NDVLEQRVAALEG----------GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAA 129 (425)
T ss_pred HHHHHHHHHHHhC----------CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEEC
Confidence 4688888888865 235567778889999999999999999999999998655554421 266665554
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
. .|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|++||+|++|+.... .
T Consensus 130 ~-------~d~e~le~ai~~------~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~-~---- 188 (425)
T PRK06084 130 H-------DDIAALEALIDE------RTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL-C---- 188 (425)
T ss_pred C-------CCHHHHHHHhcc------CCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-C----
Confidence 2 378999998864 7899999999999999999 78888999999999999999974311 1
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEec
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSY 293 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~ 293 (483)
.++ . ....+++.|+||.+|.+|.++|.+++.
T Consensus 189 ~p~-~---------~gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 189 RPF-E---------HGADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred Chh-h---------cCCCEEEECchhcccccccceeEEEEe
Confidence 111 1 134488899999999899999977764
No 221
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.85 E-value=5.7e-19 Score=178.14 Aligned_cols=175 Identities=17% Similarity=0.305 Sum_probs=131.4
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeec
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~ 173 (483)
|..++++++++++.+.+| .+++++|+|+++++.+++.++ +++||+|+++.|+|..+...+... |++++.+++
T Consensus 28 g~~~~~~~~e~~la~~~g------~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~-G~~~v~~d~ 100 (375)
T PRK11706 28 GDGGFTRRCQQWLEQRFG------SAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLR-GAKIVFVDI 100 (375)
T ss_pred CCCHHHHHHHHHHHHHhC------CCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHc-CCEEEEEec
Confidence 345677777777776544 469999999999999887765 799999999999999999988876 999999998
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc-cCCCCCc
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV-FTKESSF 252 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~-~~~~~~~ 252 (483)
+++ +|.+|++++++++.+ ++++|+++ |+||...+ +.+|.++|+++|++||+|++|+.+. +.+ .+
T Consensus 101 d~~-~~~~d~~~le~~i~~------~tk~i~~~---~~~G~~~~---~~~i~~la~~~~i~vIeD~a~a~g~~~~~-~~- 165 (375)
T PRK11706 101 RPD-TMNIDETLIEAAITP------KTRAIVPV---HYAGVACE---MDTIMALAKKHNLFVVEDAAQGVMSTYKG-RA- 165 (375)
T ss_pred CCC-cCCcCHHHHHHhcCC------CCeEEEEe---CCCCCccC---HHHHHHHHHHcCCEEEEECccccccccCC-ee-
Confidence 754 588999999998863 68888876 46998877 7788888999999999999998653 222 11
Q ss_pred chHHHhhhhccccCCCeEEEEecCc--cccCCCCceEEEEEecChHHHHHHHHhh
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLS--KDMGFPGFRVGIIYSYNDQVVSCARKMS 305 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~S--K~~g~~GlRiG~li~~~~~l~~~~~~~~ 305 (483)
+..+ . .+.+.||+ |.++ +|.+.++++. ++.+.+.++.++
T Consensus 166 --~g~~---------~-~~~~~Sf~~~K~l~-~g~gG~~~~~-~~~~~~~~~~~~ 206 (375)
T PRK11706 166 --LGTI---------G-HIGCFSFHETKNYT-AGEGGALLIN-DPALIERAEIIR 206 (375)
T ss_pred --eecC---------c-CEEEEeCCCCcccc-ccCCeEEEEC-CHHHHHHHHHHH
Confidence 1111 1 12233443 9997 6887777765 566666554433
No 222
>PRK05939 hypothetical protein; Provisional
Probab=99.85 E-value=2.2e-18 Score=174.20 Aligned_cols=162 Identities=20% Similarity=0.237 Sum_probs=124.7
Q ss_pred cCCCCCCcH---HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH---HHhh
Q 011570 89 IFQDYHGLP---EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR---DLRW 162 (483)
Q Consensus 89 ~Y~~~~g~~---~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---~~~~ 162 (483)
.|+.. |.+ .|++.+|++.+ .+..+++++++.++..++.+++++||+|+++++.|+.... .+..
T Consensus 40 ~Y~r~-g~p~~~~lE~~la~leg----------~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~ 108 (397)
T PRK05939 40 TYARQ-GTPTTAALEAKITKMEG----------GVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRG 108 (397)
T ss_pred CcCCC-CCHHHHHHHHHHHHHhC----------CCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHh
Confidence 35543 434 88888888765 2234455555899999999999999999999999976543 3444
Q ss_pred hcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccc
Q 011570 163 RTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYA 242 (483)
Q Consensus 163 ~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~ 242 (483)
. |++++.++. .|++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.
T Consensus 109 ~-G~~v~~v~~-------~d~e~l~~~l~~------~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~t~a 171 (397)
T PRK05939 109 L-GVEVTMVDA-------TDVQNVAAAIRP------NTRMVFVETIANPGTQVAD---LAGIGALCRERGLLYVVDNTMT 171 (397)
T ss_pred c-CCEEEEECC-------CCHHHHHHhCCC------CCeEEEEECCCCCCCCHHh---HHHHHHHHHHcCCEEEEECCcc
Confidence 4 999988875 278889988853 7899999999999999855 9999999999999999999985
Q ss_pred cCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEec
Q 011570 243 ATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSY 293 (483)
Q Consensus 243 ~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~ 293 (483)
....-. + . ..+..+++.|+||.++..|.++|+++..
T Consensus 172 ~~~~~~-----~---~-------~~gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 172 SPWLFR-----P---K-------DVGASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred cccccC-----c---c-------ccCCEEEEecCeecccCCCCeEEEEEec
Confidence 321100 0 0 1246688999999999889999998874
No 223
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.85 E-value=6.9e-19 Score=176.31 Aligned_cols=288 Identities=17% Similarity=0.181 Sum_probs=188.3
Q ss_pred CCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEee
Q 011570 94 HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVV 172 (483)
Q Consensus 94 ~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~ 172 (483)
....++++.++++++ .+++++++|+++++..++.++ ..+||+|+++.++|..+...+... |.+++.++
T Consensus 18 ~~~~~~~~~la~~~~----------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~ 86 (352)
T cd00616 18 PKVREFEKAFAEYLG----------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLL-GATPVFVD 86 (352)
T ss_pred HHHHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHc-CCeEEEEe
Confidence 347899999999976 246888889999999999998 689999999999999988888875 99999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
+++ .++.+|++.+++.+.+ ++++|++++ |+|.+.+ +++|.++|+++|+++|+|+++....... .
T Consensus 87 ~~~-~~~~~d~~~l~~~i~~------~~~~v~~~~---~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~g~~~~-~-- 150 (352)
T cd00616 87 IDP-DTYNIDPELIEAAITP------RTKAIIPVH---LYGNPAD---MDAIMAIAKRHGLPVIEDAAQALGATYK-G-- 150 (352)
T ss_pred cCC-CcCCcCHHHHHHhcCc------CCeEEEEEC---CCCCcCC---HHHHHHHHHHcCCeEEEECCCCCCCeEC-C--
Confidence 864 3678999999988743 788888764 6899887 7777888889999999999997321111 1
Q ss_pred chHHHhhhhccccCCCeEEEEecCc--cccCCCCceEEEEEecChHHHHHHHHhhhcCC--------------CChHHHH
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLS--KDMGFPGFRVGIIYSYNDQVVSCARKMSSFGL--------------VSSQTQH 316 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~S--K~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~--------------~s~~~q~ 316 (483)
.. +. . ...+.+.|++ |.++ +-+.|++++.++.+.+.++.....+. ...+...
T Consensus 151 ~~---~~------~-~~d~~~~S~~~~K~~~--~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (352)
T cd00616 151 RK---VG------T-FGDAGAFSFHPTKNLT--TGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEI 218 (352)
T ss_pred EE---cc------c-CcceeEEcCCCCCCCc--ccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHH
Confidence 00 10 0 1224556766 8774 33568888866666655544322110 0011111
Q ss_pred HHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCc-----eEEEeeecCchhhccChHHHHHHHHHHH
Q 011570 317 LIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNA-----GLFLWMDLHHLLKEQTYEAEMALWRVII 390 (483)
Q Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~-----g~f~~~~l~~~~~~~~~~~~~~~~~~Ll 390 (483)
.++..+.. ...+++..++.+++.+++.+.|.++ |+++..+.. ...+.+.++.. .. ....++.+.|.
T Consensus 219 ~aa~~~~~----l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~v~~~L~ 290 (352)
T cd00616 219 QAAIGLAQ----LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPE-AG---ESRDELIEALK 290 (352)
T ss_pred HHHHHHHH----HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCc-CC---CCHHHHHHHHH
Confidence 11111111 1123445555677778888889886 777654321 23444455421 00 11235666665
Q ss_pred HhcCeEeeCCCCCCCC----------------C-------CCEEEEEecc-CCHHHHHHHHHHHH
Q 011570 391 NEVKLNVSPGSSFHCP----------------N-------PGWFRVCFAN-MDDRTMEIALSRIT 431 (483)
Q Consensus 391 ~~~gV~v~pg~~f~~~----------------~-------~~~iRis~~~-~~~e~l~~~l~~L~ 431 (483)
+.||.+... |.+. . .+.+||++.. .++++++.++++|+
T Consensus 291 -~~gI~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 291 -EAGIETRVH--YPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred -HCCCCeeee--cCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 559965422 2110 0 2579999976 59999999988873
No 224
>PLN02509 cystathionine beta-lyase
Probab=99.84 E-value=1.8e-18 Score=176.71 Aligned_cols=218 Identities=18% Similarity=0.209 Sum_probs=149.6
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH----hhh
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----RWR 163 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----~~~ 163 (483)
..|+.. |. +.++++.+++.+..+ .++.++++|+++++..++ .++++||+|+++.|.|+.+...+ ..
T Consensus 125 ~~Y~r~-gn-pt~~aLE~~lA~leg------~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~- 194 (464)
T PLN02509 125 YDYTRS-GN-PTRDALESLLAKLDK------ADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPR- 194 (464)
T ss_pred CccCCC-CC-HHHHHHHHHHHHHhC------CCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHH-
Confidence 457655 54 468888888876543 567777788888987665 57899999999999999876433 34
Q ss_pred cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 164 TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 164 ~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
.|++++.++. .|++++++++.+ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.
T Consensus 195 ~G~~v~~vd~-------~d~e~l~~ai~~------~TklV~lesPsNPtG~i~D---l~~I~~lAk~~g~~lIVD~A~a~ 258 (464)
T PLN02509 195 SGVVVKRVNT-------TNLDEVAAAIGP------QTKLVWLESPTNPRQQISD---IRKIAEMAHAQGALVLVDNSIMS 258 (464)
T ss_pred CCeEEEEeCC-------CCHHHHHHhCCc------CCeEEEEECCCCCCCCHHH---HHHHHHHHHHcCCEEEEECCccc
Confidence 4888887753 367888888753 7899999999999999744 99999999999999999999864
Q ss_pred CccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHhhhc-C-CCChHHHHHHHH
Q 011570 244 TVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKMSSF-G-LVSSQTQHLIAT 320 (483)
Q Consensus 244 ~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~~~~-~-~~s~~~q~~~~~ 320 (483)
..+ . . ++ . ....+++.|++|.++-+| +=.|.+++.++.+...+...... + ..++.. +..
T Consensus 259 ~~~-~-~---pl-~---------~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~---A~l 320 (464)
T PLN02509 259 PVL-S-R---PL-E---------LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFD---CWL 320 (464)
T ss_pred ccc-C-C---hh-h---------cCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHH---HHH
Confidence 322 1 1 11 1 134578899999986433 44678887555554443333222 2 133333 222
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 321 MLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
.+..-+. +..+.++..++...+.+.|+++
T Consensus 321 ~lr~L~t----L~~R~~r~~~nA~~la~~L~~~ 349 (464)
T PLN02509 321 CLRGIKT----MALRIEKQQENARKIAMYLSSH 349 (464)
T ss_pred HHhhhhh----HHHHHHHHHHHHHHHHHHHhcC
Confidence 3332222 4555666677788888888876
No 225
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.84 E-value=2.2e-18 Score=175.21 Aligned_cols=275 Identities=13% Similarity=0.145 Sum_probs=176.4
Q ss_pred CCcEEEeCChhHHHHHHHHHhc-------C-CCCeEEEeCCCCcChHHHHhhhcCcE------------EEEeecCCCCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLA-------D-PGDAFLVPTPYYPGFDRDLRWRTGVQ------------LVPVVCDSSND 178 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~-------~-~gd~Vlv~~P~y~~~~~~~~~~~G~~------------~~~v~~~~~~~ 178 (483)
.+.+++++++++++..++.... + ..+.|+..+-+|.+.........+.. +..++.
T Consensus 92 ~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 166 (397)
T TIGR03246 92 ADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY----- 166 (397)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-----
Confidence 4699999999999999998751 1 23567777777766543222221321 112221
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHH
Q 011570 179 FKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAE 257 (483)
Q Consensus 179 ~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~ 257 (483)
.|++.+++.+.+ ++++|++..++++.|.+. +.+.+++|.++|++||+++|+||+|.++...+ . +.+...
T Consensus 167 --~d~~~l~~~l~~------~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G-~-~~a~~~ 236 (397)
T TIGR03246 167 --NDLAAAKALISD------KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTG-E-LYAYMH 236 (397)
T ss_pred --CCHHHHHHHhcc------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccc-c-chhhhh
Confidence 278899888853 677777775455666554 88999999999999999999999997653333 2 222111
Q ss_pred hhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHH
Q 011570 258 IIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAES 335 (483)
Q Consensus 258 l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 335 (483)
+.- .++ + -|+||.+| +|+|+||+++ ++.+.+.+..... .+..+++++.++.+.++... ..+.
T Consensus 237 ~gv-----~pD--i--~t~~K~lg-gG~pigav~~-~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~-----~~~l 300 (397)
T TIGR03246 237 YGV-----TPD--I--LTSAKALG-GGFPIGAMLT-TTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN-----TPEL 300 (397)
T ss_pred cCC-----CCC--E--EEeehhhh-CCcceeEEEE-cHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh-----hccH
Confidence 110 122 2 28899998 8999999999 5666665543211 12356777777766664321 1234
Q ss_pred HHHHHHHHHHHHHhhhcCC-----ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCE
Q 011570 336 AKRIAERHKAFTWGLSQVG-----IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGW 410 (483)
Q Consensus 336 ~~~l~~~~~~l~~~L~~~g-----i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~ 410 (483)
.+.++++.+++.+.|++++ +....+. |.++.+.+..... .....++..|++ +||.+.+. ++++
T Consensus 301 ~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~-G~~~~i~~~~~~~----~~~~~~~~~l~~-~Gv~~~~~------g~~~ 368 (397)
T TIGR03246 301 LAGVKQRHDLFVDGLEKINARYNVFSEIRGK-GLLIGAVLTEAYQ----GKAKQFVNAAAE-EGVIALIA------GPNV 368 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEeeecC-ceEEEEEEcCchh----hHHHHHHHHHHH-CCeEEeec------CCCE
Confidence 5566777777777777653 1222233 4555565543111 123467777775 59998763 2368
Q ss_pred EEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 411 FRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 411 iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
+|++++. .+++++++++++|.+++.+
T Consensus 369 lR~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 369 VRFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 9997765 5999999999999998865
No 226
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.84 E-value=3.1e-18 Score=170.76 Aligned_cols=324 Identities=16% Similarity=0.230 Sum_probs=216.4
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH-HhhhcCcE
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD-LRWRTGVQ 167 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~-~~~~~G~~ 167 (483)
.|.....+.+|.++++++++ .+.++.|++++.|+++++.+.++|||.| +.|+|...... +... |+.
T Consensus 66 ~yag~~s~~~lE~~va~~~G----------~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~-Gav 132 (450)
T TIGR02618 66 AYAGSRNFYHLERTVRELYG----------FKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKN-GAT 132 (450)
T ss_pred hhcCCCcHHHHHHHHHHHHC----------CCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhC-CeE
Confidence 48777788999999999986 4589999999999998887789999977 66777443343 5554 887
Q ss_pred EEEeecC--------CCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCC-CCcCCCCHHHHHHHHHHHhhcCcEEEEc
Q 011570 168 LVPVVCD--------SSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSN-PLGTFLDRETLKDIVSFINEKNIHLVCD 238 (483)
Q Consensus 168 ~~~v~~~--------~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~N-PtG~~~~~~~l~~i~~~a~~~~~~iI~D 238 (483)
++.++.+ ...++.+|++.++++|++.. ..++++|.+.+++| ..|.++|.++++++.++|++||+.||+|
T Consensus 133 ~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~--~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~D 210 (450)
T TIGR02618 133 FVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVG--ADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYD 210 (450)
T ss_pred EEeeecccccccccCCCCCCCcCHHHHHHHhcccc--CcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEE
Confidence 7766544 13357889999999997421 12456888899988 4589999999999999999999999999
Q ss_pred cccccC--ccC---C-CCCcchHHHhhhhccccCCCeEEEEecCccccCCC-CceEEEEEecChHHHHHHHHhhh-c---
Q 011570 239 EIYAAT--VFT---K-ESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP-GFRVGIIYSYNDQVVSCARKMSS-F--- 307 (483)
Q Consensus 239 eay~~~--~~~---~-~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~-GlRiG~li~~~~~l~~~~~~~~~-~--- 307 (483)
.+.... .|- . .-.-.++..+..++- . -...++.|..|.++.+ | |+++..++++.+..+.... +
T Consensus 211 aAR~~gNA~~I~~re~g~~~~~i~ei~~e~~--~-~aD~~~~S~~Kd~~~~~G---G~l~~~d~~l~~k~r~~~~~~eG~ 284 (450)
T TIGR02618 211 ATRCVENAYFIKEREQGYEDKSIAEILKEMM--S-YADGCTMSGKKDCLVNIG---GFLCMNDDEMFQSAKELVVVFEGM 284 (450)
T ss_pred ccchhhChhhhhcccccccCCCHHHHHHHHh--c-cCcEEEEeeccCCCCCCc---eEEEeCCHHHHHHHHHHhhhcCCc
Confidence 998641 110 0 011134533333221 1 1223677999998766 4 6777677777777655422 1
Q ss_pred ---CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCch---hhccChHH
Q 011570 308 ---GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHL---LKEQTYEA 381 (483)
Q Consensus 308 ---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~---~~~~~~~~ 381 (483)
+..+.-...+++..|.+.- -..+++. -....++|.+.|.+.|+++..|.+|.-++++.... +....+..
T Consensus 285 ~tyGgla~r~~~ala~gL~e~~-~~~y~~~----r~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~lph~~~~~~p~ 359 (450)
T TIGR02618 285 PSYGGLAGRDMEAMAIGIREAV-DYEYIEH----RVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFLPHIPQDQFPA 359 (450)
T ss_pred cccCchhhhhHHHHHHHHHHhh-hHHHHHH----HHHHHHHHHHHHHHCCCcccCCCCcceEEEEhHHhCCCCChhhChH
Confidence 2222223333333333210 0122222 23345788899999999998888888999987543 22233333
Q ss_pred HHHHHHHHHHhcCeE-eeCCCCCCCCC--------C--CEEEEEecc--CCHHHHHHHHHHHHHHHHHhhh
Q 011570 382 EMALWRVIINEVKLN-VSPGSSFHCPN--------P--GWFRVCFAN--MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 382 ~~~~~~~Ll~~~gV~-v~pg~~f~~~~--------~--~~iRis~~~--~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
..++..|..+.||. +.-|+...... + ..+|+++.. .|.++++...++|..+.++...
T Consensus 360 -~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~ 429 (450)
T TIGR02618 360 -QSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHRDD 429 (450)
T ss_pred -HHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhHhh
Confidence 37788888899985 44454322111 1 359999965 3999999999999987776543
No 227
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.84 E-value=5.6e-18 Score=170.48 Aligned_cols=208 Identities=17% Similarity=0.225 Sum_probs=138.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH----HhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD----LRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~~G~~~~~v 171 (483)
...|++.+|++.+ ....+++++| +.++..++ .+++|||+|++++|.|+..... +.. .|++++.+
T Consensus 52 ~~~Le~~la~l~g---------~~~al~~~SG-~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~-~gi~v~~v 119 (380)
T PRK06176 52 RFALEELIADLEG---------GVKGFAFASG-LAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVK-NGLSCTII 119 (380)
T ss_pred HHHHHHHHHHHhC---------CCCEEEECCH-HHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHh-cCeEEEEc
Confidence 5788888888865 2334666555 56887666 5679999999999999765433 333 38888777
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+. .|++.+++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+...+. .+
T Consensus 120 d~-------~d~e~l~~ai~~------~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~--~p 181 (380)
T PRK06176 120 DT-------SDLSQIKKAIKP------NTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ--NP 181 (380)
T ss_pred CC-------CCHHHHHHhcCc------CceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC--Cc
Confidence 63 378889888753 7899999999999999998 778888899999999999999754322 11
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHhhhc-C-CCChHHHHHHHHhcCChhHH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKMSSF-G-LVSSQTQHLIATMLSDDQFV 328 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~~~~-~-~~s~~~q~~~~~~l~~~~~~ 328 (483)
+ .+ ...+++.|++|.++.+| .-.|++++.++.+.+.+...... + ..++.....+..-+..
T Consensus 182 ---~-~~---------gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~t---- 244 (380)
T PRK06176 182 ---L-LL---------GADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIKT---- 244 (380)
T ss_pred ---c-cc---------CCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccCc----
Confidence 1 11 33478899999997555 45677887556666555444433 2 1344333333322322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 329 EKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 329 ~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
+..+.++..++...+.+.|+++
T Consensus 245 ---l~~R~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 245 ---LGLRMEAHQKNALCVAEFLEKH 266 (380)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhC
Confidence 1222333344455566666654
No 228
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.83 E-value=2.4e-18 Score=173.73 Aligned_cols=172 Identities=20% Similarity=0.279 Sum_probs=134.1
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeec
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~ 173 (483)
...+|++++|++++ .+++++++|+++++.+++.++ +++||+|+++.|+|..+...+... |++++.+++
T Consensus 34 ~~~~le~~la~~~g----------~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~~~~-G~~~v~vd~ 102 (379)
T PRK11658 34 KNQALEQAFCQLTG----------NQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMIVLL-GATPVMVDV 102 (379)
T ss_pred hHHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHHHHc-CCEEEEEec
Confidence 36899999999986 246888999999999999999 899999999999999998888775 999999998
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC-ccCCCCCc
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT-VFTKESSF 252 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~-~~~~~~~~ 252 (483)
+. ++|.+|++.+++++.+ ++|+|+ |+||+|...+ +++|.++|+++|++||+|++|+.. .+.+ ..
T Consensus 103 ~~-~~~~~d~~~l~~~i~~------~tkav~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D~a~a~g~~~~~-~~- 167 (379)
T PRK11658 103 DR-DTLMVTPEAIEAAITP------RTKAII---PVHYAGAPAD---LDAIRAIGERYGIPVIEDAAHAVGTYYKG-RH- 167 (379)
T ss_pred CC-CcCCcCHHHHHHhccc------CCeEEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEECCCccCCeECC-ee-
Confidence 75 3578999999998864 788876 6677999887 778889999999999999999732 2222 11
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS 305 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~ 305 (483)
.. .... .+.||++...+++.+.|+++++++++.+.++...
T Consensus 168 ~g-----------~~g~--~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~ 207 (379)
T PRK11658 168 IG-----------ARGT--AIFSFHAIKNITCAEGGLVVTDDDELADRLRSLK 207 (379)
T ss_pred cC-----------CCCC--EEEeCCCCCcCcccCceEEEECCHHHHHHHHHHH
Confidence 11 1122 3457776655677788999987677766655443
No 229
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.83 E-value=5.2e-18 Score=173.52 Aligned_cols=310 Identities=10% Similarity=0.069 Sum_probs=181.2
Q ss_pred HHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCc----------
Q 011570 99 FRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGV---------- 166 (483)
Q Consensus 99 Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~---------- 166 (483)
.+..+|+.+.+... ....+.+++++++++++..++.... ....+|+....+|.+.........|.
T Consensus 77 ~~~~la~~l~~~~p---~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~ 153 (420)
T TIGR00700 77 GYVALAEKLNRIAP---GSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGP 153 (420)
T ss_pred HHHHHHHHHHHhCC---CCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCC
Confidence 34455555544321 0123589999999999998886542 22356888888887754332221111
Q ss_pred ---EEEEeecCCC---------CCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCC-HHHHHHHHHHHhhcCc
Q 011570 167 ---QLVPVVCDSS---------NDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLD-RETLKDIVSFINEKNI 233 (483)
Q Consensus 167 ---~~~~v~~~~~---------~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~-~~~l~~i~~~a~~~~~ 233 (483)
.+..++.... ..+.-+++.+++.+... ....++.+|++..-..-+|.+++ .+.+++|.++|++||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gi 232 (420)
T TIGR00700 154 FAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVID-VGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGI 232 (420)
T ss_pred CCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhh-cCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 1122222110 00111244565555311 12235666666544666788664 5559999999999999
Q ss_pred EEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH--hhhcCCCC
Q 011570 234 HLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK--MSSFGLVS 311 (483)
Q Consensus 234 ~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~--~~~~~~~s 311 (483)
++|+||+|.++.+.+ . +.+...... .++ +.+|||.++ +|+|+||+++ ++.+.+.+.. ....+..+
T Consensus 233 llI~DEV~tg~gr~g-~-~~a~~~~~~-----~pD----i~~lsK~l~-~G~pig~v~~-~~~i~~~~~~~~~~~T~~~~ 299 (420)
T TIGR00700 233 VFIADEVQTGFARTG-A-MFACEHEGP-----EPD----LITTAKSLA-DGLPLSGVTG-RAEIMDAPAPGGLGGTYAGN 299 (420)
T ss_pred EEEEEecccCCcccc-h-hHHHhhcCC-----CCC----EEEeecccc-CCcceEEEEe-cHHHHhhcCCCCcCCCCCcC
Confidence 999999999865544 2 223222211 122 336999998 9999999999 4556555432 11223467
Q ss_pred hHHHHHHHHhc---CChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-ceeecCCceEEEeeecCchhh-ccChHHHHHHH
Q 011570 312 SQTQHLIATML---SDDQFVEKFIAESAKRIAERHKAFTWGLSQVG-IGCLKSNAGLFLWMDLHHLLK-EQTYEAEMALW 386 (483)
Q Consensus 312 ~~~q~~~~~~l---~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~~~~~~g~f~~~~l~~~~~-~~~~~~~~~~~ 386 (483)
+++|.++.+.+ .++.+ .++..+..+.++++.+.+.+ .++ +....+. |+++|+++.+... .........+.
T Consensus 300 pl~~aaa~a~l~~l~~~~~-~~~~~~~g~~l~~~L~~l~~---~~~~~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~ 374 (420)
T TIGR00700 300 PLACAAALAVLAIIESEGL-IERARQIGRLVTDRLTTLKA---VDPRIGDVRGL-GAMIAVELVDPGTTEPDAGLAERIA 374 (420)
T ss_pred HHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHh---hCCCEEEeecc-ceEEEEEEecCCCCCccHHHHHHHH
Confidence 88888875555 33332 33344444444433333322 233 3334445 6788887742100 00111122444
Q ss_pred HHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHH
Q 011570 387 RVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFML 435 (483)
Q Consensus 387 ~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~ 435 (483)
..++ ++||.+.|+..|+ +++||+++. .+++++++++++|.+++.
T Consensus 375 ~~~~-~~Gv~i~p~~~f~----~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 375 TAAH-AAGLLLLTCGMFG----NIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred HHHH-HCCeEEeccCCCC----CEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 4444 5699999987763 589999975 599999999999999874
No 230
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.83 E-value=6.1e-18 Score=172.52 Aligned_cols=344 Identities=13% Similarity=0.072 Sum_probs=199.5
Q ss_pred CcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHH----HHHHHHHhhhCCCCCcCCCcE
Q 011570 47 GVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRN----AVAKFMGKVRGNRITFDPDRI 122 (483)
Q Consensus 47 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~----~ia~~~~~~~g~~~~~~~~~i 122 (483)
..|+|-.++|.+.+............. .+.. .....-|+......+|.+ .++++++ ...-+
T Consensus 29 ~~~~l~~sen~~~p~v~~a~~~~~~~~-----~~~g-~~gsr~~~G~~~~~~lE~~~~~~la~l~g---------~~~al 93 (416)
T PRK13034 29 DHLELIASENFTSPAVMEAQGSVLTNK-----YAEG-YPGKRYYGGCEFVDEVEALAIERAKQLFG---------CDYAN 93 (416)
T ss_pred cCeeecccccCCCHHHHHHhcchhhcC-----CCCC-CCCCcccCCChHHHHHHHHHHHHHHHHhC---------CCceE
Confidence 458888888887554443332221010 0000 000001111223456666 6666654 22333
Q ss_pred EEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcCh-HHHHhhh-cCcEE--EEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 123 VMSGGATGAHETVAFCLADPGDAFLVPTPYYPGF-DRDLRWR-TGVQL--VPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~-~~~~~~~-~G~~~--~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
+.+++++.|+..++.++++|||+|+++..+|.+. ...++.. .+... +.++.+. .++.+|++++++.+...
T Consensus 94 v~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~d~~~le~~l~~~----- 167 (416)
T PRK13034 94 VQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDR-LTGLIDYDEVEELAKEH----- 167 (416)
T ss_pred EecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEccccc-ccCCcCHHHHHHHHhhc-----
Confidence 4567889999999999999999999999998762 2111110 02211 2333332 24568999999988642
Q ss_pred ceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCcc
Q 011570 199 RIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSK 278 (483)
Q Consensus 199 ~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK 278 (483)
++++|+++.+.+ |...+ +.+|.++|+++|+++|+|++++...+.. ..... .+ ....++++|++|
T Consensus 168 ~~klVi~~~~~~--g~~~d---l~~l~~la~~~g~~livD~Aha~G~~~~-g~~~~--~~--------~~~Di~~~s~~K 231 (416)
T PRK13034 168 KPKLIIAGFSAY--PRELD---FARFREIADEVGALLMVDMAHIAGLVAA-GEHPN--PF--------PHAHVVTTTTHK 231 (416)
T ss_pred CCeEEEECCCcc--ccccC---HHHHHHHHHHcCCEEEEeCcccccCccc-CCCCC--CC--------CCceEEEEeCcc
Confidence 568887766654 56666 7777888999999999999987554433 11110 01 134578899999
Q ss_pred ccCCCCceEEEEEecChHHHHHHHHhhhcC--C-CChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 011570 279 DMGFPGFRVGIIYSYNDQVVSCARKMSSFG--L-VSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGI 355 (483)
Q Consensus 279 ~~g~~GlRiG~li~~~~~l~~~~~~~~~~~--~-~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi 355 (483)
.++.+. -|++++.++.+...++.....+ . ..++...+++..+. ..+.....+.++++.++.+++.+.|.+.|+
T Consensus 232 ~l~g~~--GG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~--~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~ 307 (416)
T PRK13034 232 TLRGPR--GGMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFG--EALQPEFKTYAKQVIANAQALAEVLKERGY 307 (416)
T ss_pred cCCCCC--CeEEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHH--HHhChhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 983232 3788886666655554432221 1 11222222221111 111111234567888899999999998899
Q ss_pred eeecC-CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCC----CCCCCEEEEEecc-----CCHHHHHH
Q 011570 356 GCLKS-NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFH----CPNPGWFRVCFAN-----MDDRTMEI 425 (483)
Q Consensus 356 ~~~~~-~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~----~~~~~~iRis~~~-----~~~e~l~~ 425 (483)
++..+ .....+++.+..... ....+...|++.||.+.+-.... +..+..+|+++.. .+++++++
T Consensus 308 ~~~~~~~~t~i~~v~~~~~~~------~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~ 381 (416)
T PRK13034 308 DLVSGGTDNHLLLVDLRPKGL------SGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFRE 381 (416)
T ss_pred EeccCCCCCcEEEEEcCCCCC------CHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHH
Confidence 87642 233466666653211 11334344556799987521111 1124569999743 35899999
Q ss_pred HHHHHHHHHHHh
Q 011570 426 ALSRITSFMLKN 437 (483)
Q Consensus 426 ~l~~L~~~l~~~ 437 (483)
+++.|++++.+.
T Consensus 382 l~~~l~~~~~~~ 393 (416)
T PRK13034 382 IANWILDVLDDL 393 (416)
T ss_pred HHHHHHHHHhcC
Confidence 999999998854
No 231
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=1e-17 Score=167.94 Aligned_cols=212 Identities=12% Similarity=0.106 Sum_probs=142.1
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH----HhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD----LRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~~G~~~~~v 171 (483)
..+.++++++.+....+ .++.+ +++++++|+..++.+++++||+|+++.|.|+++... ++. .|+++..+
T Consensus 62 gnPt~~~Le~~la~le~-----~~~~v-~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~-~Gi~v~~v 134 (395)
T PRK05967 62 GTPTTDALCKAIDALEG-----SAGTI-LVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKR-LGVEVEYY 134 (395)
T ss_pred CChHHHHHHHHHHHHhC-----CCCEE-EECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHh-cCeEEEEe
Confidence 36666666666654432 34455 445578999999999999999999999999987653 344 49988887
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+.+ +.+.+++++++ ++|+|++++|+||++.+ .++++|+++|+++|+++|+|++|....+-.
T Consensus 135 d~~-------~~e~l~~al~~------~TklV~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~~~~--- 195 (395)
T PRK05967 135 DPE-------IGAGIAKLMRP------NTKVVHTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPLYFR--- 195 (395)
T ss_pred CCC-------CHHHHHHhcCc------CceEEEEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCceecC---
Confidence 532 34678887754 78999999999998654 559999999999999999999997532221
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccC-CCCceEEEEEecChHHHHHHHH-hhhcC-CCChHHHHHHHHhcCChhHH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMG-FPGFRVGIIYSYNDQVVSCARK-MSSFG-LVSSQTQHLIATMLSDDQFV 328 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~li~~~~~l~~~~~~-~~~~~-~~s~~~q~~~~~~l~~~~~~ 328 (483)
+ . ..+..|++.|.+|.++ -.++..|+++.+ +.+.+.+.. ....+ .+++.....+..-++.
T Consensus 196 --p-l---------~~GaDivv~S~tKy~~Gh~d~~~G~v~~~-~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~T---- 258 (395)
T PRK05967 196 --P-L---------DFGVDISIHAATKYPSGHSDILLGTVSAN-EKCWPQLLEAHGTLGLCAGPDDTYQILRGLRT---- 258 (395)
T ss_pred --h-h---------HcCCCEEEEecccccCCCCCeeEEEEEcC-HHHHHHHHHHHHHcCCCCCHHHHHHHHcCccc----
Confidence 1 1 1244588999999864 345778877764 444333332 22233 2344433333222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 329 EKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 329 ~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
+.-+.++..++...+.+.|+++
T Consensus 259 ---l~lR~~~~~~na~~lA~~L~~h 280 (395)
T PRK05967 259 ---MGIRLEHHRKSALEIARWLEGR 280 (395)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhC
Confidence 3344455566677778888876
No 232
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.83 E-value=1.6e-17 Score=171.33 Aligned_cols=314 Identities=12% Similarity=0.113 Sum_probs=182.8
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCC-CcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCc-------
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDP-DRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGV------- 166 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~-~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~------- 166 (483)
.+....+|+.+....+ -.. +.+++++++++++..++.... .....|+....+|.+.........|.
T Consensus 96 ~~~~~~la~~L~~~~p----~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~ 171 (451)
T PRK06918 96 YEPYIELAEKLAALAP----GSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFG 171 (451)
T ss_pred cHHHHHHHHHHHHhCC----CCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCcccccc
Confidence 3455666666654422 112 589999999999998886542 22356888888887765433222121
Q ss_pred ------EEEEeecCCC--CCcccC--------HHHHHHHHHHHHhcCCceeEEEEeCCCCCC-cCCC-CHHHHHHHHHHH
Q 011570 167 ------QLVPVVCDSS--NDFKVT--------MEALEAAYEKAQESNIRIKGVLITNPSNPL-GTFL-DRETLKDIVSFI 228 (483)
Q Consensus 167 ------~~~~v~~~~~--~~~~~d--------~~~l~~~i~~~~~~~~~~~~i~l~~P~NPt-G~~~-~~~~l~~i~~~a 228 (483)
.+..+|.... ....+. ++.+++.+.+.. ...++ +.++..|-... |.++ +.+.+++|.++|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i-Aavi~EPi~g~gG~~~~~~~~l~~l~~l~ 249 (451)
T PRK06918 172 FGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEV-APETI-AAVVMEPVQGEGGFIVPSKKFVQEVRNIC 249 (451)
T ss_pred CCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhc-CCCce-EEEEECcccCCCCCccCCHHHHHHHHHHH
Confidence 1122222110 001111 122333332110 11244 44556675444 6545 556699999999
Q ss_pred hhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh--
Q 011570 229 NEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS-- 306 (483)
Q Consensus 229 ~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~-- 306 (483)
++||+++|+||+|.++.+.+ . +.+...+.. .++ +.||||.++ +|+|+||+++ ++.+.+.+.....
T Consensus 250 ~~~gillI~DEV~tg~gr~g-~-~~a~~~~~v-----~pD----i~t~sK~l~-~G~pig~v~~-~~~i~~~~~~~~~~~ 316 (451)
T PRK06918 250 SEHGILFVADEIQTGFARTG-K-YFAIEHFDV-----VPD----LITVSKSLG-AGVPISGVIG-RKEIMDESAPGELGG 316 (451)
T ss_pred HHcCCEEEEeccccCcCccC-c-eehhHhcCC-----CCC----EEeeehhhc-CCCccEEEEE-cHHHHhccCCCCcCc
Confidence 99999999999999875554 3 334333321 123 348999998 9999999999 4555555432211
Q ss_pred cCCCChHHHHHHHHhcC---ChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-ceeecCCceEEEeeecCchh-hccChHH
Q 011570 307 FGLVSSQTQHLIATMLS---DDQFVEKFIAESAKRIAERHKAFTWGLSQVG-IGCLKSNAGLFLWMDLHHLL-KEQTYEA 381 (483)
Q Consensus 307 ~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~~~~~~g~f~~~~l~~~~-~~~~~~~ 381 (483)
.+..+++++.++.++++ ++. +.++.++..+.+.++.+.+.+ +++ +....+.|+++.|....+.. .......
T Consensus 317 T~~g~~l~~aaa~a~l~~i~~~~-~~~~~~~~g~~l~~~l~~l~~---~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~ 392 (451)
T PRK06918 317 TYAGSPLGCAAALAVLDIIEKEN-LNDRAIELGKVVMNRFEEMKN---KYNCIGDVRGLGAMCAFELVQDRKTKEPDKTL 392 (451)
T ss_pred CCCcCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHh---hCCCceeeccceeEEEEEEccCCCcCCCcHHH
Confidence 23467888888555553 322 234444444444444333332 222 23345667777665542110 0011111
Q ss_pred HHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 382 EMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 382 ~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
...+...++ ++||.+.|+..|+ +++||+++. ++++++++++++|.+++++..
T Consensus 393 ~~~l~~~~~-~~Gvlv~~~~~~~----~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~ 445 (451)
T PRK06918 393 TANICKEAN-KRGLLLLSAGTYG----NVIRVLMPLVITDEQLEEGLTIIEESLQACY 445 (451)
T ss_pred HHHHHHHHH-HCCeEEeecCCCC----CEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 234555555 5699999986653 589999976 699999999999999998764
No 233
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=5.2e-17 Score=166.53 Aligned_cols=316 Identities=15% Similarity=0.120 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCc--------
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGV-------- 166 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~-------- 166 (483)
.+.+..+|+.+.+..+ ..-+.+++++++++++..++.... .....|+....+|.+.........|.
T Consensus 83 ~~~~~~la~~L~~~~p----~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~ 158 (443)
T PRK08360 83 PVEPLLLAEKLIEIAP----GDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALV 158 (443)
T ss_pred cHHHHHHHHHHHHhCC----CCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCC
Confidence 4455666666665422 123689999999999999886542 22357888887776653222111121
Q ss_pred ----EEEEeecCCCC--Ccc--------cCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCC-HHHHHHHHHHHhhc
Q 011570 167 ----QLVPVVCDSSN--DFK--------VTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLD-RETLKDIVSFINEK 231 (483)
Q Consensus 167 ----~~~~v~~~~~~--~~~--------~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~-~~~l~~i~~~a~~~ 231 (483)
.+..+|.+... .|. -+++.+++.+... ..+.++++|++..-+||+|.+++ .+.+++|.++|++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~ 237 (443)
T PRK08360 159 GELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGE-VYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEH 237 (443)
T ss_pred CCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhc-cCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 12222222110 011 1234455555321 11246777777643799999887 55799999999999
Q ss_pred CcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh--cCC
Q 011570 232 NIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS--FGL 309 (483)
Q Consensus 232 ~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~--~~~ 309 (483)
|+++|+||+|.++.+.+ . +.+...+.- . +.++ ++||++| +|+|+||+++ ++.+.+.+..... .+.
T Consensus 238 g~llI~DEv~~g~gr~G-~-~~a~~~~~~-----~-pDii---tlsK~l~-~G~pigav~~-~~~i~~~~~~~~~~~T~~ 304 (443)
T PRK08360 238 GILLVVDEVQSGLGRTG-K-WFAIEHFGV-----E-PDII---TLGKPLG-GGLPISATIG-RAEIMDSLPPLAHAFTLS 304 (443)
T ss_pred CCEEEEeccccCCCcCc-c-chhhhhcCC-----C-CCEE---Eeccccc-CCceeEEEEE-cHHHHhhhcCCCCCCCCC
Confidence 99999999999864444 2 222222211 2 2232 7799999 9999999999 4666665543221 233
Q ss_pred CChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc----CCceeecCCceEEEeeecCchhh--ccChHHHH
Q 011570 310 VSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ----VGIGCLKSNAGLFLWMDLHHLLK--EQTYEAEM 383 (483)
Q Consensus 310 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~gi~~~~~~~g~f~~~~l~~~~~--~~~~~~~~ 383 (483)
.+++++.++.++++.-. + ....++++++-+++.+.|++ .++......-|+++-+++..... ........
T Consensus 305 ~~p~~~aaa~a~l~~l~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~ 379 (443)
T PRK08360 305 GNPVASAAALAVIEEIE--E---KNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAA 379 (443)
T ss_pred cCHHHHHHHHHHHHHHH--H---cCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHH
Confidence 56777777766664311 0 01222333333334443332 33222223345677676642110 01111223
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhhccC
Q 011570 384 ALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVEAKV 442 (483)
Q Consensus 384 ~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~~~~ 442 (483)
.+...++ ++||.+.+.. .+.+|++... ++++++++++++|.++++...+.+.
T Consensus 380 ~~~~~l~-~~Gi~~~~~~------~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~~~~~ 432 (443)
T PRK08360 380 KVVWRAW-ELGLIVTFFS------GNVLRIQPPLTIEKEVLDEGLDILEEAIEDVEEGKV 432 (443)
T ss_pred HHHHHHH-HCCeEEeecC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhccC
Confidence 5666666 5699986431 3579998766 5999999999999999988765543
No 234
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.82 E-value=1.5e-17 Score=168.25 Aligned_cols=350 Identities=11% Similarity=0.069 Sum_probs=217.4
Q ss_pred CCcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEe
Q 011570 46 NGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMS 125 (483)
Q Consensus 46 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it 125 (483)
...|+|-.+||..++... +++...-.. .....+.....|+......++.....+...+.+| .+..+|-..
T Consensus 49 ~~~l~LiasEN~~s~~v~-~a~~s~l~n-----kyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~----a~~anvqp~ 118 (493)
T PRK13580 49 RSSLKLIASENYSSLAVQ-LAMGNLLTD-----KYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFG----AEHAYVQPH 118 (493)
T ss_pred hcCceEecccccCCHHHH-HHhcccccc-----cCcCCCCCccccCCCchHHHHHHHHHHHHHHHhC----CCcccccCC
Confidence 345788888887765433 222211000 0001112223455555566777777777777776 455677777
Q ss_pred CChhHHHHHHHHHhcCC-------------------------------CCeEEEeCCCCcChHHH-----HhhhcCcEEE
Q 011570 126 GGATGAHETVAFCLADP-------------------------------GDAFLVPTPYYPGFDRD-----LRWRTGVQLV 169 (483)
Q Consensus 126 ~G~~~al~~~~~~l~~~-------------------------------gd~Vlv~~P~y~~~~~~-----~~~~~G~~~~ 169 (483)
+|+. ++..++.++++| ||+|+..++..+++... +... ..+++
T Consensus 119 Sg~~-An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~-~~~~~ 196 (493)
T PRK13580 119 SGAD-ANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGK-MFHQR 196 (493)
T ss_pred CcHH-HHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhh-eeeeE
Confidence 7755 666777888876 89999887766544221 1111 25566
Q ss_pred EeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC
Q 011570 170 PVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE 249 (483)
Q Consensus 170 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~ 249 (483)
.++++++ ...+|.+.+++.+.+ +++.|+++..+|- |...+ +++|.++|+++|+++++|+++...++..
T Consensus 197 ~y~vd~~-~g~iD~d~l~~~~~~------~~plvii~g~S~~-~~~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg- 264 (493)
T PRK13580 197 SYGVDPD-TGLLDYDEIAALARE------FKPLILVAGYSAY-PRRVN---FAKLREIADEVGAVLMVDMAHFAGLVAG- 264 (493)
T ss_pred ecccCcc-cCccCHHHHHHHHhh------cCCEEEEeCcccc-CCCcC---HHHHHHHHHHcCCEEEEECchhhceecc-
Confidence 6777643 357999999999876 5677888888776 44667 7788888889999999999998665553
Q ss_pred CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhH
Q 011570 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQF 327 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~ 327 (483)
..+.. .... .....++++|++|++ .|-+.|++++ ++.+.+.+....++ ++..++...+++..+.. .
T Consensus 265 ~~~~~--~~~~-----~~~~D~vtgT~hKaL--~GP~GG~I~~-~~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e--~ 332 (493)
T PRK13580 265 KVFTG--DEDP-----VPHADIVTTTTHKTL--RGPRGGLVLA-KKEYADAVDKGCPLVLGGPLPHVMAAKAVALAE--A 332 (493)
T ss_pred ccchh--hcCC-----CCCCcEEEeCChhhc--cCCCeEEEEe-cHHHHHHHhhCCCcccCCCccHHHHHHHHHHHH--H
Confidence 21110 0000 113457899999988 3344589998 45566666444443 22222333322222221 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCceeecC-CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC
Q 011570 328 VEKFIAESAKRIAERHKAFTWGLSQVGIGCLKS-NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP 406 (483)
Q Consensus 328 ~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~-~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~ 406 (483)
.....++.++++.++.++|.+.|.+.|+++... ..+-.+++++.+.. .....+...|++.||.+.+-.....+
T Consensus 333 ~~~ef~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~------~~g~~a~~~L~e~GI~vn~i~~Ptvp 406 (493)
T PRK13580 333 RTPEFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFG------LTGRQAESALLDAGIVTNRNSIPSDP 406 (493)
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHH------HHHHHHHHHHHHCCeEEccccCCCCC
Confidence 111124457788899999999999999987531 22357788886421 12234555566789998765544432
Q ss_pred -C---CCEEEEEecc-----CCHHHHHHHHHHHHHHHHHh
Q 011570 407 -N---PGWFRVCFAN-----MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 407 -~---~~~iRis~~~-----~~~e~l~~~l~~L~~~l~~~ 437 (483)
+ +..|||+... .++++++++++.|.++++..
T Consensus 407 ~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 407 NGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred CCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 2 4579999864 25899999999999988764
No 235
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.82 E-value=4.7e-17 Score=166.28 Aligned_cols=310 Identities=10% Similarity=0.118 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCc--------
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGV-------- 166 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~-------- 166 (483)
.+....+|+.+.+... . ...+.+++++++++++..++.... ....+|+....+|.+.........|.
T Consensus 82 ~~~~~~la~~l~~~~p--~-~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~ 158 (421)
T PRK09792 82 YESYVTLAEKINALAP--V-SGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGF 158 (421)
T ss_pred CHHHHHHHHHHHHhCC--C-CCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCC
Confidence 3444555555554321 0 122589999999999998886642 22357888888887754322221121
Q ss_pred -----EEEEeecCCCCCccc----CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHhhcCcEEE
Q 011570 167 -----QLVPVVCDSSNDFKV----TMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFINEKNIHLV 236 (483)
Q Consensus 167 -----~~~~v~~~~~~~~~~----d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~~~~~~iI 236 (483)
.++.+|.+.+.. .+ +++.+++.+++.. ...++++|++...++|+|.++ +.+.+++|.++|++||+++|
T Consensus 159 ~~~~~~~~~v~~p~~~~-~~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI 236 (421)
T PRK09792 159 GPFPGSVYHVPYPSDLH-GISTQDSLDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMI 236 (421)
T ss_pred CCCCCCcEEcCCCcccc-cccHHHHHHHHHHHHHhcc-CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 122223221110 12 2466666664310 123677777765589999866 89999999999999999999
Q ss_pred EccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH--hhhcCCCChHH
Q 011570 237 CDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK--MSSFGLVSSQT 314 (483)
Q Consensus 237 ~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~--~~~~~~~s~~~ 314 (483)
+||++.++.+.+ . +.+...+.. .++ +.||||.++ +|+|+||+++ ++++.+.+.. ....+..++++
T Consensus 237 ~DEv~tg~gr~G-~-~~a~~~~~~-----~pD----i~t~gK~l~-~G~pigav~~-~~~i~~~~~~~~~~~T~~gnpl~ 303 (421)
T PRK09792 237 ADEVQSGFARTG-K-LFAMDHYAD-----KPD----LMTMAKSLA-GGMPLSGVVG-NANIMDAPAPGGLGGTYAGNPLA 303 (421)
T ss_pred EeccccCCCCCC-c-hhHHHhcCC-----CCc----EEEeehhhc-CCCceEEEEE-cHHHHhccCCCCcCCCCCCCHHH
Confidence 999999865544 2 233333311 223 459999998 9999999999 5656554422 11123467788
Q ss_pred HHHHHHh---cCChhHHHHHHHHHHHHHHHHHHHHHHhhh-cCCceeecCCc-eEEEeeecCchhhcc-ChHHHHHHHHH
Q 011570 315 QHLIATM---LSDDQFVEKFIAESAKRIAERHKAFTWGLS-QVGIGCLKSNA-GLFLWMDLHHLLKEQ-TYEAEMALWRV 388 (483)
Q Consensus 315 q~~~~~~---l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~-~~gi~~~~~~~-g~f~~~~l~~~~~~~-~~~~~~~~~~~ 388 (483)
++++.+. +.++++ +++.+ .+.++.....+.|. +.+. +....| |+++|+++++..... .......+...
T Consensus 304 ~aaa~a~l~~l~~~~~----~~~~~-~~g~~l~~~l~~l~~~~p~-v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~ 377 (421)
T PRK09792 304 VAAAHAVLNIIDKESL----CERAN-QLGQRLKNTLIDAKESVPA-IAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQR 377 (421)
T ss_pred HHHHHHHHHHHHhhhH----HHHHH-HHHHHHHHHHHHHHHhCCC-cceecccceEEEEEecCCccCCcchHHHHHHHHH
Confidence 8754444 433332 22222 22222222222332 2343 234455 899999997421100 01123356666
Q ss_pred HHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHH
Q 011570 389 IINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFML 435 (483)
Q Consensus 389 Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~ 435 (483)
+++ +||.+.+.. ...+.+||.++. ++++++++++++|.++++
T Consensus 378 ~~~-~Gv~i~~~g----~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 378 ALA-QGLLLLTCG----AYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred HHH-CCcEEeecC----CCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 775 699986421 124689999987 699999999999999875
No 236
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.81 E-value=9.7e-18 Score=169.29 Aligned_cols=284 Identities=23% Similarity=0.282 Sum_probs=193.1
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCC-CcEEEeCChhHHHHHHHHHh---cCCCCeEEEeCCCCcChHHH----HhhhcCcE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDP-DRIVMSGGATGAHETVAFCL---ADPGDAFLVPTPYYPGFDRD----LRWRTGVQ 167 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~-~~i~it~G~~~al~~~~~~l---~~~gd~Vlv~~P~y~~~~~~----~~~~~G~~ 167 (483)
..+.|+.++++++ .++ ++|++++|++++++.++.++ +++||+|++..-.|++.... .+. .|.+
T Consensus 45 ~~~~r~~la~~lg--------~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~-~g~~ 115 (371)
T PF00266_consen 45 LEEAREALAKLLG--------APPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKR-KGAE 115 (371)
T ss_dssp HHHHHHHHHHHHT--------SSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHH-TTEE
T ss_pred HHHHHHHHHHhcC--------Cccccccccccccchhhhhhhhcccccccccccccccccccccccccccccccc-chhh
Confidence 3577788888877 456 79999999999999999999 79999999999998776622 223 4999
Q ss_pred EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccC
Q 011570 168 LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFT 247 (483)
Q Consensus 168 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~ 247 (483)
+..++.+.++ .+|++.++++|.. ++++|+++..+|-||...+ +++|.++|+++|+++++|-+++. +
T Consensus 116 v~~i~~~~~~--~~~~~~~~~~l~~------~~~lv~~~~~~~~tG~~~p---i~~I~~~~~~~~~~~~vD~~~~~---g 181 (371)
T PF00266_consen 116 VRVIPADPGG--SLDLEDLEEALNP------DTRLVSISHVENSTGVRNP---IEEIAKLAHEYGALLVVDAAQSA---G 181 (371)
T ss_dssp EEEEEEGTTS--SCSHHHHHHHHHT------TESEEEEESBETTTTBBSS---HHHHHHHHHHTTSEEEEE-TTTT---T
T ss_pred hccccccccc--hhhhhhhhhhhcc------ccceEEeecccccccEEee---eceehhhhhccCCceeEechhcc---c
Confidence 9999886543 6889999999963 8999999999999999999 88889999999999999999973 3
Q ss_pred CCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh---------------------
Q 011570 248 KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS--------------------- 306 (483)
Q Consensus 248 ~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~--------------------- 306 (483)
. .+ ..+. ..+..+++.|..|.+|.+| +|+++.++ ...+.++....
T Consensus 182 ~-~~-id~~---------~~~~D~~~~s~~Kl~gp~G--~g~l~v~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 247 (371)
T PF00266_consen 182 C-VP-IDLD---------ELGADFLVFSSHKLGGPPG--LGFLYVRP-EAIERLRPAKPGGGYLDFPSLQEYGLADDARR 247 (371)
T ss_dssp T-SS---TT---------TTTESEEEEESTSTTSSST--EEEEEEEH-HHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTG
T ss_pred c-cc-cccc---------ccccceeeecccccCCCCc--hhhheehh-hhhhccccccccccccccccchhccccccccc
Confidence 2 11 2221 2355678899999555555 79999954 44444421110
Q ss_pred c--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceeec----CCceEEEeeecCchhhccCh
Q 011570 307 F--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLK----SNAGLFLWMDLHHLLKEQTY 379 (483)
Q Consensus 307 ~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~----~~~g~f~~~~l~~~~~~~~~ 379 (483)
+ ++.+.+...++..+++.- .+.-+++..++..+..+++.+.|.+. ++.+.. ...+..+.+.++.. +
T Consensus 248 ~~~GT~~~~~~~~l~~al~~~--~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~---- 320 (371)
T PF00266_consen 248 FEGGTPNVPAIYALNEALKLL--EEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGS-D---- 320 (371)
T ss_dssp SSSSS--HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTS-S----
T ss_pred ccccceeeehhhhHHHHHhhh--hccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCC-C----
Confidence 1 123333333333333221 12224555667778888888888887 455532 22233455555431 1
Q ss_pred HHHHHHHHHHHHhcCeEeeCCCCCCC------CCCCEEEEEecc-CCHHHHHHH
Q 011570 380 EAEMALWRVIINEVKLNVSPGSSFHC------PNPGWFRVCFAN-MDDRTMEIA 426 (483)
Q Consensus 380 ~~~~~~~~~Ll~~~gV~v~pg~~f~~------~~~~~iRis~~~-~~~e~l~~~ 426 (483)
..++...|.++ ||.+..|..+.. ...+.+|+|++. .++++++++
T Consensus 321 --~~~~~~~L~~~-~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 321 --ADDVVKYLEER-GIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp --HHHHHHHHHHH-TEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred --HHHHHHHHhhc-CEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 22566666655 999999876641 113789999987 589998864
No 237
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.80 E-value=4.7e-17 Score=167.96 Aligned_cols=310 Identities=16% Similarity=0.156 Sum_probs=188.0
Q ss_pred HHHHHHHHHhhhCCCCCcCCCcEEEe---CChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh---------cCcE
Q 011570 100 RNAVAKFMGKVRGNRITFDPDRIVMS---GGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR---------TGVQ 167 (483)
Q Consensus 100 r~~ia~~~~~~~g~~~~~~~~~i~it---~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~---------~G~~ 167 (483)
|+.++++++ .+++++.++ +|+++++..++.+++++||+|++....|+......... .+.+
T Consensus 86 r~~~a~lf~--------a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~ 157 (452)
T PTZ00094 86 QKRALEAFG--------LDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFE 157 (452)
T ss_pred HHHHHHHhC--------CCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeee
Confidence 345555554 466777677 78899999999999999999999887776654432110 0234
Q ss_pred EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccC
Q 011570 168 LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFT 247 (483)
Q Consensus 168 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~ 247 (483)
++.++++.+ ..+|+++|++.+++. ++++|++. ++.+|...+ +.+|.++|+++|+++++|++++.....
T Consensus 158 ~~~~~~~~~--g~id~~~L~~~l~~~-----~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~ 225 (452)
T PTZ00094 158 SLPYQVNEK--GLIDYDKLEELAKAF-----RPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVA 225 (452)
T ss_pred eeecccCCC--CCcCHHHHHHHHHHh-----CCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhcccc
Confidence 445555543 579999999998642 56666654 334999999 677778888999999999999754333
Q ss_pred CCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHH-HHhh----h-c-CCCChHHHHHHHH
Q 011570 248 KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCA-RKMS----S-F-GLVSSQTQHLIAT 320 (483)
Q Consensus 248 ~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~-~~~~----~-~-~~~s~~~q~~~~~ 320 (483)
. ..... .+ ....+++.|++|+++ |.+.|++++.++ +.+.+ .... + + +..+.....+++.
T Consensus 226 ~-~~~~~--~~--------~~~D~l~~S~hK~l~--GP~Gg~l~~~~~-~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~ 291 (452)
T PTZ00094 226 A-GVLPS--PF--------PYADVVTTTTHKSLR--GPRSGLIFYRKK-VKPDIENKINEAVFPGLQGGPHNHQIAAIAV 291 (452)
T ss_pred C-CCCCC--CC--------CCCcEEEcCCccCCC--CCCceEEEEecc-cchHHHHhhccccCCCCCCCchHHHHHHHHH
Confidence 2 11000 01 134477899999873 333488887443 22211 1111 1 1 1222233333333
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCc-eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEe-e
Q 011570 321 MLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNA-GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNV-S 398 (483)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~-g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v-~ 398 (483)
.+..-. ....++.++++.++++++.+.|.+.|+++..+.. .-.+.+.+... .. .. .....+|+++||.+ .
T Consensus 292 al~~~~--~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~~~~~~~v~~~~~--~~---~~-~~~~~~L~~~gI~vs~ 363 (452)
T PTZ00094 292 QLKEVQ--SPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGTDNHLVLVDLRPF--GI---TG-SKMEKLLDAVNISVNK 363 (452)
T ss_pred HHHHHh--ChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCCCceEeecCCcC--CC---CH-HHHHHHHHHCCcEEec
Confidence 332210 1123456677888889999999888887764221 22344444321 10 11 23444557789999 4
Q ss_pred CCCCCCC--CCCCEEEEEeccC-C----HHHHHHHHHHHHHHHHHhhh-ccCccchhhccc
Q 011570 399 PGSSFHC--PNPGWFRVCFANM-D----DRTMEIALSRITSFMLKNVE-AKVPNKKKLCWQ 451 (483)
Q Consensus 399 pg~~f~~--~~~~~iRis~~~~-~----~e~l~~~l~~L~~~l~~~~~-~~~~~~~~~~~~ 451 (483)
++..+.. ..++++|+++... + +++++.+++.|.++++.... .+...++..+|+
T Consensus 364 ~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 424 (452)
T PTZ00094 364 NTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLAQEIQKQVGKKLVDFK 424 (452)
T ss_pred ccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHHhhhhhhcccchhhhh
Confidence 4443321 1347899999653 3 89999999999998886432 333355555554
No 238
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.80 E-value=4e-17 Score=165.28 Aligned_cols=295 Identities=15% Similarity=0.166 Sum_probs=186.2
Q ss_pred CCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEee
Q 011570 94 HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVV 172 (483)
Q Consensus 94 ~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~ 172 (483)
....+++++++++++. ++.++++|+++++..++.++ +++||+|+++.|+|..+...+... |++++.++
T Consensus 29 ~~~~~le~~la~~~g~----------~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~~~-G~~~~~~~ 97 (380)
T TIGR03588 29 PTVPAFEEALAEYVGA----------KYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCALYC-GAKVDFVD 97 (380)
T ss_pred hhHHHHHHHHHHHHCC----------CeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHc-CCEEEEEe
Confidence 3468999999999871 34566778899999999998 799999999999999988888775 99999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc-cCCCCC
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV-FTKESS 251 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~-~~~~~~ 251 (483)
++++ ++.+|++.+++++.+. ..+++++|+++ |++|...+ +++|.++|+++|++||+|++++... +.+ .+
T Consensus 98 ~~~~-~~~~d~~~l~~~i~~~--~~~~t~~v~~~---~~~G~~~~---~~~i~~l~~~~~~~lI~D~a~a~g~~~~~-~~ 167 (380)
T TIGR03588 98 IDPD-TGNIDEDALEKKLAAA--KGKLPKAIVPV---DFAGKSVD---MQAIAALAKKHGLKIIEDASHALGAEYGG-KP 167 (380)
T ss_pred cCCC-cCCcCHHHHHHHhhcc--cCCCceEEEEe---CCCCccCC---HHHHHHHHHHcCCEEEEECCCcccCccCC-Ee
Confidence 8653 5789999999998632 01267888754 56898877 7888899999999999999997531 322 11
Q ss_pred cchHHHhhhhccccCCCeEEEEecCc--cccCCCCceEEEEEecChHHHHHHHHhhhcCCC-------------------
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLS--KDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLV------------------- 310 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~S--K~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~------------------- 310 (483)
..+ .. -..+.+.||+ |.++.+ ..|+++..++.+.+.++.....+..
T Consensus 168 ~g~-~~----------~~d~~~~S~~~~K~~~~~--~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 234 (380)
T TIGR03588 168 VGN-CR----------YADATVFSFHPVKIITTA--EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQ 234 (380)
T ss_pred CCC-cc----------ccceEEEecCCCCccccc--CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeee
Confidence 111 00 1135566765 887633 4688888777777665543221100
Q ss_pred --------ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecC-C---ceEEE-eeecCchhhc
Q 011570 311 --------SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKS-N---AGLFL-WMDLHHLLKE 376 (483)
Q Consensus 311 --------s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~-~---~g~f~-~~~l~~~~~~ 376 (483)
+.+ ++++. +. . +++ +++..++-++..+++.+.|.++ ++....+ . .++++ .+.++.. .
T Consensus 235 ~~g~n~~m~~l-~aa~g--~~--q-L~~-l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~- 305 (380)
T TIGR03588 235 ELGFNYRMTDI-QAALG--LS--Q-LKK-LDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQE-F- 305 (380)
T ss_pred ccccccCccHH-HHHHH--HH--H-HHH-HHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCc-C-
Confidence 111 11111 00 0 111 3344444456667777888776 3443322 1 12222 2333311 0
Q ss_pred cChHHHHHHHHHHHHhcCeEeeCCCCC-------C---CCC---------CCEEEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 377 QTYEAEMALWRVIINEVKLNVSPGSSF-------H---CPN---------PGWFRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 377 ~~~~~~~~~~~~Ll~~~gV~v~pg~~f-------~---~~~---------~~~iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
. ....++.+.|. +.||.++..-.. . ... ...+++.+.. .++++++..++.|++++
T Consensus 306 -~-~~r~~l~~~L~-~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 306 -G-CTRKEVFEALR-AAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred -C-CCHHHHHHHHH-HCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 0 11236666664 669987643211 0 000 1458887754 58999999999998764
No 239
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.80 E-value=9.1e-17 Score=160.74 Aligned_cols=325 Identities=14% Similarity=0.189 Sum_probs=214.5
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCc-ChHHHHhhhcCcE
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYP-GFDRDLRWRTGVQ 167 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~-~~~~~~~~~~G~~ 167 (483)
.|.......+|.++++++++ .+.++.++.++.++++++...++|||.| +..+|. .....+... |+.
T Consensus 73 ~Yagd~s~~~LE~~vAe~lG----------~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~-Ga~ 139 (460)
T PRK13237 73 AYAGSRNFYHLEETVQEYYG----------FKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELN-GGI 139 (460)
T ss_pred hhcCCCcHHHHHHHHHHHHC----------CCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhC-CcE
Confidence 48777788999999999987 3579999999999998877778999965 444333 333335554 876
Q ss_pred EEEeecC--------CCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCC-cCCCCHHHHHHHHHHHhhcCcEEEEc
Q 011570 168 LVPVVCD--------SSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPL-GTFLDRETLKDIVSFINEKNIHLVCD 238 (483)
Q Consensus 168 ~~~v~~~--------~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPt-G~~~~~~~l~~i~~~a~~~~~~iI~D 238 (483)
.+-+..+ ...++.+|++.++++|++.. ..++++|.+.+++|.. |..+|.+++++|.++|++||+.||+|
T Consensus 140 fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~--~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~D 217 (460)
T PRK13237 140 FVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG--AENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFD 217 (460)
T ss_pred EEeeecccccccccCCCCCCCcCHHHHHHHhcccc--CCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEE
Confidence 6555322 22357899999999997521 1355678888899988 79999999999999999999999999
Q ss_pred cccccC--ccC----CCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh------
Q 011570 239 EIYAAT--VFT----KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS------ 306 (483)
Q Consensus 239 eay~~~--~~~----~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~------ 306 (483)
.+.... +|- ..-.-.++..+..++. .+ ...++.|++|.++.+- -|++++.++++.+.++....
T Consensus 218 aAra~gna~fI~~re~~y~~~~i~ei~~e~~--s~-aD~~t~S~~K~~~~~~--GG~i~t~D~eL~~~~r~~~~~~eG~~ 292 (460)
T PRK13237 218 ATRCVENAYFIKEREEGYQDKSIKEIVHEMF--SY-ADGCTMSGKKDCLVNI--GGFLAMNDEELFDEAKELVVVYEGMP 292 (460)
T ss_pred CcchhcChhhhcccccccCCCcHhHHhhhcc--Cc-CcEEEEeCCCCCCCCC--ceEEEECCHHHHHHHHHhccccCCCc
Confidence 998632 010 0001123333322221 12 2345668999987551 38999988888887766532
Q ss_pred -cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCch---hhccChHHH
Q 011570 307 -FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHL---LKEQTYEAE 382 (483)
Q Consensus 307 -~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~---~~~~~~~~~ 382 (483)
++..+.-...+++.-+.+.-. .+|+..+ .+..++|.+.|.+.|+++..|.||--++++.... +....+..
T Consensus 293 tygg~~grd~~alAvgl~E~~~-~~y~~~r----i~~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~- 366 (460)
T PRK13237 293 SYGGMAGRDMEAMAIGIEESVQ-YEYIEHR----VGQVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLPQDQFPA- 366 (460)
T ss_pred CCCChhhhHHHHHHhHHHhhch-HHHHHHH----HHHHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCCcccChH-
Confidence 122222233344433332111 1334333 3345788999999999999999998888876442 22233333
Q ss_pred HHHHHHHHHhcCeE-eeCCCCCCCC-----C-----CCEEEEEecc--CCHHHHHHHHHHHHHHHHHhhh
Q 011570 383 MALWRVIINEVKLN-VSPGSSFHCP-----N-----PGWFRVCFAN--MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 383 ~~~~~~Ll~~~gV~-v~pg~~f~~~-----~-----~~~iRis~~~--~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
..++..|..+.||. +--|+..... . -..+|+++.. .|.++++...++|..+.++...
T Consensus 367 ~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~ 436 (460)
T PRK13237 367 QALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHRED 436 (460)
T ss_pred HHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhHhh
Confidence 37888888898985 3334432111 0 1359999965 3999999999999987776543
No 240
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.80 E-value=3.4e-17 Score=155.82 Aligned_cols=302 Identities=17% Similarity=0.152 Sum_probs=193.3
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH--HhhhcCcEEEEee
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD--LRWRTGVQLVPVV 172 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~--~~~~~G~~~~~v~ 172 (483)
|..+..+++.+++.+.++ .+.++++.++|++..+++.+.++||+.|++..-.|-...++ +....++. +++
T Consensus 32 G~D~~~~~~e~~~ae~~g------~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~aHi~~~E~Ga~~~~~~~~--~~~ 103 (342)
T COG2008 32 GEDPTTNALEQRIAELFG------KEAALFVPSGTQANQLALAAHCQPGESVICHETAHIYTDECGAPEFFGGGQ--KLP 103 (342)
T ss_pred CCCHHHHHHHHHHHHHhC------CceEEEecCccHHHHHHHHHhcCCCCeEEEeccccceecccCcHHHHcCCc--eec
Confidence 445666666666666554 28999999999999999999999999999998877544332 22222222 333
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
..+..+..++++.+++.|+...-+...++++++.|++|-.|+++|.+++++|.++|+++|+.+..|.+-....... ..
T Consensus 104 ~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~va-lg- 181 (342)
T COG2008 104 IVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVA-LG- 181 (342)
T ss_pred cCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHH-cC-
Confidence 3333456899999999987622134456677777777788999999999999999999999999999874322111 11
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh-hcCCC---ChHHHHHHHHhcCChhHH
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS-SFGLV---SSQTQHLIATMLSDDQFV 328 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~-~~~~~---s~~~q~~~~~~l~~~~~~ 328 (483)
++...+.. ...++.-++||..+.| +|.|+..+..+.+.++.++ ..+.. +.+..+....+|+++-|.
T Consensus 182 ~~~~~~~~-------~~D~v~~~~tK~g~~~---~gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~~ 251 (342)
T COG2008 182 VALKTIKS-------YVDSVSFCLTKGGGAP---VGAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALEDDVWR 251 (342)
T ss_pred CCHHHHHh-------hCCEEEEecccCCcce---eeeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHHH
Confidence 34444432 2223445889987655 4877776666665544333 22221 222223333445554331
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCC
Q 011570 329 EKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPN 407 (483)
Q Consensus 329 ~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~ 407 (483)
...++-.+...+|.+.|+.. |+++..|.-.+.++++++...- +...+... +.+.|+.+.++.
T Consensus 252 -----~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~i-----~~l~~~~~-~~~~~~~~~~~~------ 314 (342)
T COG2008 252 -----LAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESAI-----EALRLAGA-LFYRGVLIGAHG------ 314 (342)
T ss_pred -----HHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChHHH-----HHHHhhch-hheeeeeccCCC------
Confidence 11222233467788888854 9988775555688999985211 11122222 223455544332
Q ss_pred CCEEEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 408 PGWFRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 408 ~~~iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
..+|+..++ ++++++++++..++.++
T Consensus 315 -~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 315 -EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred -ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 359999987 69999999999988764
No 241
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.80 E-value=9.7e-17 Score=147.79 Aligned_cols=316 Identities=19% Similarity=0.260 Sum_probs=220.0
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcE--EEeCChhHHHHHHHHHh---cCCCCeEEEeCCCCcChHHHHhh
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRI--VMSGGATGAHETVAFCL---ADPGDAFLVPTPYYPGFDRDLRW 162 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i--~it~G~~~al~~~~~~l---~~~gd~Vlv~~P~y~~~~~~~~~ 162 (483)
+.|-+.-|++.++.+.++.+-.... ..+..+.+ +=+-+++.++.+....| +. ...|.+..|+|......++.
T Consensus 68 HEYLpi~Gl~~F~~~A~el~lg~~s--~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if~~ 144 (410)
T KOG1412|consen 68 HEYLPILGLPTFTKAATELLLGADS--PAIKEDRVFGVQSLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAIFEK 144 (410)
T ss_pred chhccccCchhhhhhhHHHhcCCCc--hhhhhccccceeeccccchhhhhHHHHHHhcc-cceeEecCCchhHHHHHHHH
Confidence 5688888999999999888643211 11233332 22455666776665443 33 45799999999999999988
Q ss_pred hcC-cEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE-EEeCC-CCCCcCCCCHHHHHHHHHHHhhcCcEEEEcc
Q 011570 163 RTG-VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV-LITNP-SNPLGTFLDRETLKDIVSFINEKNIHLVCDE 239 (483)
Q Consensus 163 ~~G-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i-~l~~P-~NPtG~~~~~~~l~~i~~~a~~~~~~iI~De 239 (483)
. | .++..++.-+.+.-.+|++.+.+.|+.+ ..+.| ++..+ |||||.-.+.|++..|++..+..+.+.+.|-
T Consensus 145 a-Gf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~A-----Pe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDi 218 (410)
T KOG1412|consen 145 A-GFTTVATYPYWDAENKCVDLEGFLSDLESA-----PEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDI 218 (410)
T ss_pred c-CCceeeeeeeecCCCceecHHHHHHHHhhC-----CCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeeh
Confidence 6 8 5566666655556679999999998864 33444 44444 9999999999999999999999999999999
Q ss_pred ccccCccCC-CCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEE--EecChHHHHHHH-H---h--hhcCCC
Q 011570 240 IYAATVFTK-ESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGII--YSYNDQVVSCAR-K---M--SSFGLV 310 (483)
Q Consensus 240 ay~~~~~~~-~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~l--i~~~~~l~~~~~-~---~--~~~~~~ 310 (483)
+|.++.-++ +.....+....+ ....++++.||+|.||+-+-|+|.+ +..+...+..+. . . ..+..+
T Consensus 219 AYQGfASGD~~~DawAiR~fV~-----~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNP 293 (410)
T KOG1412|consen 219 AYQGFASGDLDADAWAIRYFVE-----QGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNP 293 (410)
T ss_pred hhcccccCCccccHHHHHHHHh-----cCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCC
Confidence 999853332 111233333443 3356889999999999999999944 334444333222 1 1 122334
Q ss_pred ChHHHHHHHHhcCChhHHHHHH---HHHHHHHHHHHHHHHHhhhcCC----ceeecCCceEEEeeecCchhhccChHHHH
Q 011570 311 SSQTQHLIATMLSDDQFVEKFI---AESAKRIAERHKAFTWGLSQVG----IGCLKSNAGLFLWMDLHHLLKEQTYEAEM 383 (483)
Q Consensus 311 s~~~q~~~~~~l~~~~~~~~~~---~~~~~~l~~~~~~l~~~L~~~g----i~~~~~~~g~f~~~~l~~~~~~~~~~~~~ 383 (483)
+.....+++.+|..++..++|. +.+..++++.|..|++.|..++ |.-...+-|||-+--+..
T Consensus 294 PAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLtp----------- 362 (410)
T KOG1412|consen 294 PAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLTP----------- 362 (410)
T ss_pred cchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCCH-----------
Confidence 4456677899999877655554 4455678888888888888773 555567778888755542
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhh
Q 011570 384 ALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 384 ~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
.-.+.|.+++.|.+.+ +| ||+++..+...++...++|.++++...
T Consensus 363 ~qV~~li~~h~vyLl~--------~G--RInisGLN~~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 363 AQVDHLIENHKVYLLS--------DG--RINISGLNMKNVEYVAKAIDETVRAIK 407 (410)
T ss_pred HHHHHHHHhceEEEec--------CC--cEeeeccccccHHHHHHHHHHHHHhhc
Confidence 3356788888998764 23 899988888889999999988887654
No 242
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.80 E-value=6.2e-17 Score=165.03 Aligned_cols=290 Identities=15% Similarity=0.130 Sum_probs=184.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc----------CCCCeEEEeCCCCcCh-HHHHhhhc
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA----------DPGDAFLVPTPYYPGF-DRDLRWRT 164 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~----------~~gd~Vlv~~P~y~~~-~~~~~~~~ 164 (483)
..+|.+.+++++ + .+.+++++++++++..++..+. ...+.|+...-+|.+. ...+...
T Consensus 81 ~~~l~~~l~~~~----~------~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~- 149 (401)
T TIGR01885 81 FGEFAEYVTKLF----G------YDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMS- 149 (401)
T ss_pred HHHHHHHHHhhc----C------CCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCc-
Confidence 345555555553 2 3689999999999999998752 2246788888887653 3433321
Q ss_pred Cc------------EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCH-HHHHHHHHHHhhc
Q 011570 165 GV------------QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDR-ETLKDIVSFINEK 231 (483)
Q Consensus 165 G~------------~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~-~~l~~i~~~a~~~ 231 (483)
|. .++.++. .|++.|++.+++. +.++.+|++..+++++|.+.+. +.+++|.++|++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~ 219 (401)
T TIGR01885 150 TDPDSRTNFGPYVPGFKKIPY-------NNLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKH 219 (401)
T ss_pred CCcccccccCCCCCCceEeCC-------CCHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc
Confidence 21 1222221 2688999888642 2467778877789999998864 4699999999999
Q ss_pred CcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH-hh-hcCC
Q 011570 232 NIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK-MS-SFGL 309 (483)
Q Consensus 232 ~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~-~~-~~~~ 309 (483)
|+++|+||+|.++.+.+ . +.+. .... ..+.++ ++||.++..|+|+|+++++ +++.+.+.. .. ....
T Consensus 220 ~~lli~DEv~~g~g~~G-~-~~~~-~~~~-----~~~di~---~~gK~l~~g~~~ig~v~~~-~~i~~~~~~~~~~~t~~ 287 (401)
T TIGR01885 220 NVLLIADEIQTGLGRTG-K-LLCV-DHEN-----VKPDIV---LLGKALSGGVYPVSAVLAD-DDVMLTIKPGEHGSTYG 287 (401)
T ss_pred CCEEEEechhhCCCccc-h-hhHH-hhcC-----CCCCEE---EeeccccCCCCCcEEEEEc-HHHHhhccCCCCCCCCC
Confidence 99999999997643333 2 1121 1111 112232 5789998666999999994 556555432 11 1123
Q ss_pred CChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcee---ecCCceEEEeeecCchhhccChHHHHHHH
Q 011570 310 VSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGC---LKSNAGLFLWMDLHHLLKEQTYEAEMALW 386 (483)
Q Consensus 310 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~---~~~~~g~f~~~~l~~~~~~~~~~~~~~~~ 386 (483)
.+++++.++.+.|+.. ++ ....+++++..+++.+.|++++..+ ..+.|. +..+.++.... . ....+++
T Consensus 288 ~~p~~~~aa~a~L~~i---~~--~~l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~g~-~~~i~~~~~~~--~-~~~~~l~ 358 (401)
T TIGR01885 288 GNPLACAVAVAALEVL---EE--EKLAENAEKLGEIFRDQLKKLPKPIITEVRGRGL-LNAIVIDESKT--G-RTAWDLC 358 (401)
T ss_pred CCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHhccCCceeEEeecCe-eEEEEeccCcc--h-hHHHHHH
Confidence 4677777776666432 11 1223445556688888888774332 234554 44444432110 0 1234677
Q ss_pred HHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 387 RVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 387 ~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
..|. ++||.+.|+. ++.+||+... ++++++++++++|++++
T Consensus 359 ~~l~-~~Gv~v~~~~------~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 359 LKLK-EKGLLAKPTH------GNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred HHHH-hCCEEEEecC------CCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 7776 5699998742 4689999854 69999999999998875
No 243
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.80 E-value=2.5e-18 Score=162.05 Aligned_cols=288 Identities=19% Similarity=0.294 Sum_probs=174.2
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCC------CCeEEEeCCCCcChHHHHhhhcCcEEE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADP------GDAFLVPTPYYPGFDRDLRWRTGVQLV 169 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~------gd~Vlv~~P~y~~~~~~~~~~~G~~~~ 169 (483)
.++|.+.|-+++.. -|. ...+...|++++|+++.++.++.+|... --.|+...|.|+.|....... .-...
T Consensus 45 s~eL~~~Ir~LH~~-VGN-Avt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f-~s~~y 121 (363)
T PF04864_consen 45 SPELERQIRRLHRV-VGN-AVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFF-DSRLY 121 (363)
T ss_dssp -HHHHHHHHHHHHH-H-S-B--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT--BTTE
T ss_pred cHHHHHHHHHHHHH-hcc-ccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhc-cccCc
Confidence 57888888887764 342 2245557999999999999999998533 137999999999998876544 22222
Q ss_pred EeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE-EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCC
Q 011570 170 PVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV-LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTK 248 (483)
Q Consensus 170 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i-~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~ 248 (483)
...-|. ..|. +- +..-..| ++|+||||.|.+ .+.++ +..+..+|.|-||-+-.|+.
T Consensus 122 ~w~Gda-~~~~-~~-------------~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyTp 178 (363)
T PF04864_consen 122 KWAGDA-SNFK-NS-------------DNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYTP 178 (363)
T ss_dssp EEEEEC-CCGT-T--------------S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS-
T ss_pred cccccH-Hhhc-cC-------------CCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeecccccc
Confidence 222111 1221 10 0122345 999999999997 44455 34556789999997544443
Q ss_pred CCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCC--
Q 011570 249 ESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSD-- 324 (483)
Q Consensus 249 ~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~-- 324 (483)
+..- .+..|.+.|+||.-|-+|.|+||.+..++.+.+.+..+... .++|.=+|.-++.+|..
T Consensus 179 ------I~~~--------aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~ 244 (363)
T PF04864_consen 179 ------ITAP--------ADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVL 244 (363)
T ss_dssp --------S---------B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHH
T ss_pred ------cCCC--------CCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHH
Confidence 2221 14557889999999999999999999888887776554333 34777777766655542
Q ss_pred --hhHH---HHHHHHHHHHHHHHHHHHHHhhhcCC-cee--ecC-----------CceEEEeeecCchhhccChHHHHHH
Q 011570 325 --DQFV---EKFIAESAKRIAERHKAFTWGLSQVG-IGC--LKS-----------NAGLFLWMDLHHLLKEQTYEAEMAL 385 (483)
Q Consensus 325 --~~~~---~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~--~~~-----------~~g~f~~~~l~~~~~~~~~~~~~~~ 385 (483)
.+.. .++..--++.+++|...|.+.+..-+ +.. ..| ...-|.|+++....+. +
T Consensus 245 ~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~-------D- 316 (363)
T PF04864_consen 245 DGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDE-------D- 316 (363)
T ss_dssp HHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGGS-------S-
T ss_pred hcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcccc-------c-
Confidence 0000 02345556778888889998887642 111 111 1234999999853211 2
Q ss_pred HHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 386 WRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 386 ~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
|...|+++||..+.|..|+. ++.++|||+- .++++++.+++||..+
T Consensus 317 C~~~l~~~~I~tr~G~~fga-~~ryVRlSml-~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 317 CYAVLREAKIITRSGVLFGA-DSRYVRLSML-KRDDDFDQLLERLSKL 362 (363)
T ss_dssp HHHHHHCTTEEEEEGGGGTS--TTEEEEESS-S-HHHHHHHHHHHHCC
T ss_pred HHHHHHhCCcccCCCCccCC-CCCeEEEecc-CCHHHHHHHHHHHHhh
Confidence 55567789999999999986 5779999996 4899999999999754
No 244
>PLN02624 ornithine-delta-aminotransferase
Probab=99.80 E-value=7.6e-17 Score=166.85 Aligned_cols=287 Identities=13% Similarity=0.108 Sum_probs=173.5
Q ss_pred CCcEEEeCChhHHHHHHHHHhcC---------CCC-eEEEeCCCCcChHHHHhhhcCcE------------EEEeecCCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLAD---------PGD-AFLVPTPYYPGFDRDLRWRTGVQ------------LVPVVCDSS 176 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~---------~gd-~Vlv~~P~y~~~~~~~~~~~G~~------------~~~v~~~~~ 176 (483)
.+.+++++++++++..++..... ++. .|+...-+|.+.........+-. +..++
T Consensus 132 ~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~---- 207 (474)
T PLN02624 132 YDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVD---- 207 (474)
T ss_pred CCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeC----
Confidence 36899999999999988865432 133 57777777766533222111111 11121
Q ss_pred CCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHH-HHHHHHHHHhhcCcEEEEccccccCccCCCCCcchH
Q 011570 177 NDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRE-TLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSI 255 (483)
Q Consensus 177 ~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~-~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~ 255 (483)
| -|++.+++.++. .+.++.+|++..++|++|.+++.+ .+++|.++|++||+++|+||+|.++...+ . ....
T Consensus 208 --~-~d~~~l~~~l~~---~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG-~-~~a~ 279 (474)
T PLN02624 208 --F-GDLDALEKIFEE---DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTG-K-MLAC 279 (474)
T ss_pred --C-CCHHHHHHHHHh---CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCc-c-hhhH
Confidence 1 268888888864 234688889999999999988776 59999999999999999999998743333 2 1121
Q ss_pred HHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChh--HHHHH
Q 011570 256 AEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQ--FVEKF 331 (483)
Q Consensus 256 ~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~--~~~~~ 331 (483)
.... ....++ ++||.+|.+++++|+++++ +++...+..... ....+++++.++.+.|+... .+.++
T Consensus 280 -~~~~-----i~pDiv---~lsK~lggG~~pigav~~~-~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~l~~~ 349 (474)
T PLN02624 280 -DWEE-----VRPDVV---ILGKALGGGVIPVSAVLAD-KDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEKLAER 349 (474)
T ss_pred -HhcC-----CCCCEE---EecccccCCCCcceeeeec-HHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHH
Confidence 1111 112222 4689999666999999994 455544432221 12357777777766664211 11222
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEE
Q 011570 332 IAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWF 411 (483)
Q Consensus 332 ~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~i 411 (483)
..++.+.++++.+.+.+.+.. .+....+.| .++.+.+..... ......+++..|. ++||.+.|+. .+++
T Consensus 350 ~~~~~~~l~~~L~~l~~~~~~-~i~~vrg~G-~~~~i~l~~~~~--~~~~a~~~~~~L~-e~GV~v~p~~------~~~l 418 (474)
T PLN02624 350 SAKLGQELRDQLQKIQKQFPK-LIKEVRGRG-LLNAVVLNSPKL--GPVSAYDVCLKLK-ERGLLAKPTH------DTII 418 (474)
T ss_pred HHHHHHHHHHHHHHHHHhCCC-ceEEEEeeE-EEEEEEecCCCc--ChHHHHHHHHHHH-hCCeEEecCC------CCEE
Confidence 233333333333333222221 133334454 455555542110 0112346777765 5699998752 4689
Q ss_pred EEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 412 RVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 412 Ris~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
||++.. ++++++++++++|++++++..
T Consensus 419 R~~p~l~~t~e~id~~l~~L~~~l~~~~ 446 (474)
T PLN02624 419 RLAPPLSISEDELQECSKALSDVLEHDL 446 (474)
T ss_pred EEECCccCCHHHHHHHHHHHHHHHHHHH
Confidence 999754 699999999999999886643
No 245
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.79 E-value=1.1e-16 Score=162.47 Aligned_cols=301 Identities=17% Similarity=0.146 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc------C--C-CCeEEEeCCCCcChHHHHhhhcCcE
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA------D--P-GDAFLVPTPYYPGFDRDLRWRTGVQ 167 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~------~--~-gd~Vlv~~P~y~~~~~~~~~~~G~~ 167 (483)
.+....+++.+.+..+ ..+.+++++++++++..++.... + + ..+|+....+|.+.........|..
T Consensus 81 ~~~~~~la~~L~~~~~-----~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~ 155 (408)
T PRK04612 81 SAPPLKLAEELVTASR-----FAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQP 155 (408)
T ss_pred CHHHHHHHHHHHhhCC-----CCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCc
Confidence 3445566666654321 13689999999999999886543 1 1 2468999998877644332221221
Q ss_pred EEE---eecCCC---CCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCC--HHHHHHHHHHHhhcCcEEEEcc
Q 011570 168 LVP---VVCDSS---NDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLD--RETLKDIVSFINEKNIHLVCDE 239 (483)
Q Consensus 168 ~~~---v~~~~~---~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~--~~~l~~i~~~a~~~~~~iI~De 239 (483)
... -+.... -.| .|++.+++.+.. +..+.++..|.+++|.+++ .+.+++|.++|++||+++|+||
T Consensus 156 ~~~~~~~~~~~~~~~~~~-~d~~~l~~~~~~------~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DE 228 (408)
T PRK04612 156 KYQEGYEPLPGGFRYVDF-NDVEALEAAMAG------GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDE 228 (408)
T ss_pred ccccCCCCCCCCceEcCC-CCHHHHHHhhCC------CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 110 011100 011 267888877742 3456778889888887766 6789999999999999999999
Q ss_pred ccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--hcCCCChHHHHH
Q 011570 240 IYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--SFGLVSSQTQHL 317 (483)
Q Consensus 240 ay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--~~~~~s~~~q~~ 317 (483)
+|.++...+ . + .... ..+.+..+.||||.+| +|+|+||++++ +.+.+.+.... ..+..+++++.+
T Consensus 229 v~tg~gr~G-~-~--~a~~-------~~~~~pdi~t~~K~l~-~G~piga~~~~-~~~~~~~~~~~~~~t~~~~p~~~aa 295 (408)
T PRK04612 229 IQCGMGRTG-T-L--FAHW-------QEQVTPDIVTLAKALG-GGFPIGAMLAG-PKVAETMQFGAHGTTFGGNPLAAAV 295 (408)
T ss_pred cccCCCcCC-c-h--hhhh-------hcCCCCCEEEEcchhc-CCCceEEEEEC-HHHHhhhcCCCcCCCCCCCHHHHHH
Confidence 998753433 2 1 1111 1233455679999998 99999999985 45555543211 123467888888
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC----CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhc
Q 011570 318 IATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV----GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEV 393 (483)
Q Consensus 318 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~ 393 (483)
+.+.|+.-. + ....++++++-+++.+.|+++ ++......-|+++.+.+..... .....+...+. ++
T Consensus 296 a~a~L~~~~---~--~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~----~~a~~i~~~l~-~~ 365 (408)
T PRK04612 296 ARVALRKLA---S--PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHA----GQAGAILDLAA-EH 365 (408)
T ss_pred HHHHHHHHH---h--ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchh----hHHHHHHHHHH-HC
Confidence 777774321 1 123334444445555555443 3222223335677777642110 11235555555 56
Q ss_pred CeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 394 KLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 394 gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
||.+.+. +.+.+|++... ++++++++++++|++++++..
T Consensus 366 Gvlv~~~------g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~~ 405 (408)
T PRK04612 366 GLLLLQA------GPDVLRFVPALNLTDAELADGLARLRLALADYV 405 (408)
T ss_pred CeEEeeC------CCCEEEEcCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 9998763 23679999865 599999999999999997754
No 246
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.79 E-value=1.2e-16 Score=161.65 Aligned_cols=309 Identities=17% Similarity=0.137 Sum_probs=195.7
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcC-CCcEEEeCChh-HHHHHHHHHhcC---CCCeEEEeCCCCcChHHHHhhhcCcEEEE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFD-PDRIVMSGGAT-GAHETVAFCLAD---PGDAFLVPTPYYPGFDRDLRWRTGVQLVP 170 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~-~~~i~it~G~~-~al~~~~~~l~~---~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~ 170 (483)
...+.+.+.+.+.+..| +. .+..++++|++ .++.+++.++-. +||.|+++.-+|.....++... |++++.
T Consensus 103 ~~~l~~~~e~~~~~~~G----~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~-G~~pv~ 177 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLG----LRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTA-GFEPRV 177 (444)
T ss_pred HHHHHHHHHHHHHHHcC----CCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHc-CCeEEE
Confidence 34555566665555555 22 24688888888 577777776642 5899999999999988888886 999999
Q ss_pred eec-CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC
Q 011570 171 VVC-DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE 249 (483)
Q Consensus 171 v~~-~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~ 249 (483)
++. .++++|.+|++.|+++|.+. +.+.+++++++|+ |+.....+++++|.++|++||+++|+|++|+.. .
T Consensus 178 Vd~~~d~~~~~iD~e~Le~aIt~~---~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~---~- 248 (444)
T TIGR03531 178 IETVLDGDELTTDVEDIERAIEEI---GPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQ---S- 248 (444)
T ss_pred eeeeecCcCCCcCHHHHHHHHHhc---cCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCc---C-
Confidence 995 23457999999999999742 1245667777776 555556677999999999999999999999842 1
Q ss_pred CCcchHHHhh-hhccccCCC-eEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhH
Q 011570 250 SSFVSIAEII-DQDIACNRN-LIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQF 327 (483)
Q Consensus 250 ~~~~s~~~l~-~~~~~~~~~-~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~ 327 (483)
. ....+. ... ..+ -.+++.|++|.+.++|. .|.+++.++.+.+.+.........+++.|.+.+.++..+
T Consensus 249 ~---~~~~~~~~g~---~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G-- 319 (444)
T TIGR03531 249 N---KYMELINKAI---KVGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLG-- 319 (444)
T ss_pred h---hhhhhhhccc---cccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhC--
Confidence 1 111111 000 111 24667799999988776 334446567777666554333334456777666665432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcC----CceeecC-CceEEEeeecCchhhccChHHHHHHHHHHHHhcCe----Eee
Q 011570 328 VEKFIAESAKRIAERHKAFTWGLSQV----GIGCLKS-NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKL----NVS 398 (483)
Q Consensus 328 ~~~~~~~~~~~l~~~~~~l~~~L~~~----gi~~~~~-~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV----~v~ 398 (483)
.+.+++..++..++++++.+.|.++ |.++... .....+-+.+.... +. +...+-..|. ..+| .|.
T Consensus 320 -~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~-~~---~~~~~g~~l~-~~~v~g~r~v~ 393 (444)
T TIGR03531 320 -SKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK-GK---DPTMLGSMLY-SRRVTGPRVVT 393 (444)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc-cc---CHHHHHHHHH-hCCCCCceeec
Confidence 2345666666777777777777664 6666644 33344445554321 11 1223444444 3355 245
Q ss_pred CCC-------C---CCCCCC----CEEEEEecc-CCHHHHHHHHHHHHHH
Q 011570 399 PGS-------S---FHCPNP----GWFRVCFAN-MDDRTMEIALSRITSF 433 (483)
Q Consensus 399 pg~-------~---f~~~~~----~~iRis~~~-~~~e~l~~~l~~L~~~ 433 (483)
||. . |+...+ .|+=++.+- ++.++++.++++|.+.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 394 NGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred CCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 666 2 221111 133333321 6899999999999875
No 247
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.79 E-value=3.7e-17 Score=166.91 Aligned_cols=275 Identities=12% Similarity=0.103 Sum_probs=175.4
Q ss_pred cCCCcEEEeCChhHHHHHHHHHhcCCC---CeEEEeCCCCcChHHH----HhhhcCcEE----EEeecCCCCCcccCHHH
Q 011570 117 FDPDRIVMSGGATGAHETVAFCLADPG---DAFLVPTPYYPGFDRD----LRWRTGVQL----VPVVCDSSNDFKVTMEA 185 (483)
Q Consensus 117 ~~~~~i~it~G~~~al~~~~~~l~~~g---d~Vlv~~P~y~~~~~~----~~~~~G~~~----~~v~~~~~~~~~~d~~~ 185 (483)
.++++|++|+|++++++.++.++++++ +.|++....|+..... ++.. |+++ +.++.++ ++.+|++.
T Consensus 84 ~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~-g~~~~~~~~~~~~~~--~g~~~~~~ 160 (406)
T TIGR01814 84 AKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLH-GLTVEESMVQIEPRE--EETLRLED 160 (406)
T ss_pred CCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhc-CCCcccceEEeccCC--CCccCHHH
Confidence 578999999999999999999887664 3688888899874332 3343 8776 4555443 44678999
Q ss_pred HHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhcccc
Q 011570 186 LEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIAC 265 (483)
Q Consensus 186 l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~ 265 (483)
+++.++.. ++++++|++++++|.||.+.+ +++|.++|+++|+++++|++++. +. .+ .++.
T Consensus 161 l~~~~~~~---~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~---G~-~~-id~~--------- 220 (406)
T TIGR01814 161 ILDTIEKN---GDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAV---GN-VP-LDLH--------- 220 (406)
T ss_pred HHHHHHhc---CCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEccccc---CC-cc-cccc---------
Confidence 98887531 347899999999999999999 88888999999999999999973 32 11 2222
Q ss_pred CCCeEEEEecCccccC-CCCceEEEEEecChHHHHHHHHhhh------------------------cCCCChHHHHHHHH
Q 011570 266 NRNLIHIVYSLSKDMG-FPGFRVGIIYSYNDQVVSCARKMSS------------------------FGLVSSQTQHLIAT 320 (483)
Q Consensus 266 ~~~~vi~~~S~SK~~g-~~GlRiG~li~~~~~l~~~~~~~~~------------------------~~~~s~~~q~~~~~ 320 (483)
..+..+++.|.+|.++ -|| .|..+. ++.+......... .++.+.+...++.+
T Consensus 221 ~~gvD~~~~s~hK~l~g~pG--~~l~v~-~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~ 297 (406)
T TIGR01814 221 DWGVDFACWCTYKYLNAGPG--AGAFVH-EKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRG 297 (406)
T ss_pred cCCCCEEEEcCccccCCCCC--eEEEEe-hhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHH
Confidence 1245678899999863 345 443333 3322211100000 12223333333333
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CceeecCCc----eEEEeeecCchhhccChHHHHHHHHHHHH
Q 011570 321 MLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-----GIGCLKSNA----GLFLWMDLHHLLKEQTYEAEMALWRVIIN 391 (483)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-----gi~~~~~~~----g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~ 391 (483)
+++-.. +.-.++.+++..+..+++.+.|.+. |+++..+.. +..+.+.++ .+ ..++.+.|.
T Consensus 298 al~~~~--~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~--~~------~~~~~~~L~- 366 (406)
T TIGR01814 298 SLDIFD--QAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP--VP------GKAVFQALI- 366 (406)
T ss_pred HHHHHH--hcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec--CC------HHHHHHHHH-
Confidence 332110 1113445566666777777777653 366654421 224455555 11 125666665
Q ss_pred hcCeEeeCCCCCCCCCCCEEEEEec--cCCHHHHHHHHHHHHHHH
Q 011570 392 EVKLNVSPGSSFHCPNPGWFRVCFA--NMDDRTMEIALSRITSFM 434 (483)
Q Consensus 392 ~~gV~v~pg~~f~~~~~~~iRis~~--~~~~e~l~~~l~~L~~~l 434 (483)
++||.+... .++.+|+|++ +.++++++.++++|++++
T Consensus 367 ~~gi~v~~~------~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 367 KRGVIGDKR------EPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred HCCEEEecc------CCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 569987532 2358999994 469999999999998764
No 248
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=2.4e-16 Score=160.95 Aligned_cols=155 Identities=25% Similarity=0.298 Sum_probs=120.4
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH----HhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD----LRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~~G~~~~~v 171 (483)
...|++.+|++.+ .+..++++++++++..++.++++|||+|+++.++|...... +... |++++.+
T Consensus 65 ~~~le~~lA~l~g----------~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~-G~~v~~v 133 (427)
T PRK05994 65 NAVLEERVAALEG----------GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSF-GWQVRWA 133 (427)
T ss_pred HHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhc-CcEEEEE
Confidence 4678888888865 23577888889999999999999999999999999864433 4444 9998887
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+.+ |++.+++++.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|... +.. .
T Consensus 134 d~~-------d~~~l~~ai~~------~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~-~~~-~- 194 (427)
T PRK05994 134 DAD-------DPASFERAITP------RTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASP-YLI-R- 194 (427)
T ss_pred CCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCcccc-ccC-C-
Confidence 642 68889888853 7899999999999999998 788889999999999999999642 111 1
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEe
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYS 292 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~ 292 (483)
++ .....+++.|++|.+|-+|-.+|.+++
T Consensus 195 --pl----------~~gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 195 --PI----------EHGADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred --cc----------ccCCcEEEEcCccccCCCCCcEEEEEE
Confidence 11 113447889999999866666675554
No 249
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.78 E-value=5.3e-17 Score=166.33 Aligned_cols=291 Identities=14% Similarity=0.118 Sum_probs=175.3
Q ss_pred CCcEEEeCChhHHHHHHHHHhcC--CCCeEEEeCCCCcChHHHHhhhcCcEE----------EEeecCCCCCc---ccCH
Q 011570 119 PDRIVMSGGATGAHETVAFCLAD--PGDAFLVPTPYYPGFDRDLRWRTGVQL----------VPVVCDSSNDF---KVTM 183 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~~G~~~----------~~v~~~~~~~~---~~d~ 183 (483)
.+.+++++++++++..++..... .++.|+..+++|+++...+....|... .+.+.. ...+ ..|+
T Consensus 106 ~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~ 184 (426)
T PRK00062 106 IEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFA-KHTLTAPYNDL 184 (426)
T ss_pred CCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccc-cceEEcCCCCH
Confidence 56899999999999999987432 357899999999987633322111100 000000 0001 1378
Q ss_pred HHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCC-HHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhc
Q 011570 184 EALEAAYEKAQESNIRIKGVLITNPSNPLGTFLD-RETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQD 262 (483)
Q Consensus 184 ~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~-~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~ 262 (483)
+.+++.+... ..++.+|++..-...+|.+.+ .+.+++|.++|++||+++|+||+|.++ ..+ .. .. .+... .
T Consensus 185 ~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~-r~g-~~-~~-~~~~~-~ 256 (426)
T PRK00062 185 EAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGF-RVA-LG-GA-QGYYG-V 256 (426)
T ss_pred HHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcc-ccC-Cc-cH-HHHhC-C
Confidence 8888888642 235666666633344888876 888999999999999999999999875 222 21 12 12211 0
Q ss_pred cccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh---h--cCCCChHHHHHHHHhcCChhHHHHHHHHHHH
Q 011570 263 IACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS---S--FGLVSSQTQHLIATMLSDDQFVEKFIAESAK 337 (483)
Q Consensus 263 ~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~---~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~ 337 (483)
.++ +.+|||.+| .|+++|++++ ++.+.+.+.... . .+..+++.++++.+.|+-... .+..++.++
T Consensus 257 ---~pD----i~~~gK~l~-~G~p~ga~~~-~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~-~~~~~~~~~ 326 (426)
T PRK00062 257 ---TPD----LTTLGKIIG-GGLPVGAFGG-RREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKE-PGFYEELEA 326 (426)
T ss_pred ---Ccc----hHhhhhHhh-CCCcceeeeE-HHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhc-chHHHHHHH
Confidence 122 358999998 9999999988 566666653211 1 123577777776666542110 112333333
Q ss_pred HHHHHHHHHHHhhhcCCceee-cCCceEEEeeecCch-hh------ccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCC
Q 011570 338 RIAERHKAFTWGLSQVGIGCL-KSNAGLFLWMDLHHL-LK------EQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPG 409 (483)
Q Consensus 338 ~l~~~~~~l~~~L~~~gi~~~-~~~~g~f~~~~l~~~-~~------~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~ 409 (483)
.....++.+.+.+.+.++... .+.| .++-+.+... .. .........+...++ ++||.+.|.. + +
T Consensus 327 ~~~~~~~~l~~~~~~~~~~~~vrg~G-~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~-~~Gv~v~~~~-~-----~ 398 (426)
T PRK00062 327 LTKRLAEGLKEAAKKAGIPLTVNRVG-SMFGLFFTDEPVTNYADAKKSDTERFARFFHAML-DEGVYLAPSQ-F-----E 398 (426)
T ss_pred HHHHHHHHHHHHHHHcCCceEEEEec-ceEEEEEecCCCcchhhhccccHHHHHHHHHHHH-HCCeEeecCC-c-----C
Confidence 344444445554555565543 3444 4555555321 00 000011235666666 4699998742 2 2
Q ss_pred EEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 410 WFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 410 ~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
.+++++. ++++++++++++|++++.+.
T Consensus 399 ~~~~~~~-~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 399 AGFVSAA-HTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred ceeeecc-CCHHHHHHHHHHHHHHHHhh
Confidence 4677754 69999999999999988653
No 250
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.78 E-value=5.8e-16 Score=158.24 Aligned_cols=310 Identities=12% Similarity=0.094 Sum_probs=186.9
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCcE--------
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGVQ-------- 167 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~~-------- 167 (483)
+....+|+.+.+... . -..+.+++++++++++..++.... ....+|+....+|.+.........|..
T Consensus 83 ~~~~~la~~l~~~~p--~-~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~ 159 (421)
T PRK06777 83 ASYVTLAERINALAP--I-DGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFG 159 (421)
T ss_pred hHHHHHHHHHHHhCC--C-CCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCC
Confidence 344555555554321 0 124689999999999998886542 223568888888877654333221210
Q ss_pred -----EEEeecCCCC-C--cccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcC-CCCHHHHHHHHHHHhhcCcEEEEc
Q 011570 168 -----LVPVVCDSSN-D--FKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGT-FLDRETLKDIVSFINEKNIHLVCD 238 (483)
Q Consensus 168 -----~~~v~~~~~~-~--~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~-~~~~~~l~~i~~~a~~~~~~iI~D 238 (483)
+..++.++.. + ..-+++.+++.+.+. ....++.+|++....++.|. +.+.+.+++|.++|++||+++|+|
T Consensus 160 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~-~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~D 238 (421)
T PRK06777 160 PFPGSIFHALYPNELHGVSVEEALSSVERLFKAD-IAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIAD 238 (421)
T ss_pred CCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhc-cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 1111211100 0 011355666666421 01235666666544777885 678999999999999999999999
Q ss_pred cccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--hcCCCChHHHH
Q 011570 239 EIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--SFGLVSSQTQH 316 (483)
Q Consensus 239 eay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--~~~~~s~~~q~ 316 (483)
|+|.++.+.+ . +.+...+.. .++ ++ ++||.+| +|+|+||+++ ++.+.+.+.... ..+..+++++.
T Consensus 239 Ev~tg~gr~g-~-~~~~~~~~~-----~pD--iv--~~sK~l~-~G~pigav~~-~~~i~~~~~~~~~~~T~~~~p~~~a 305 (421)
T PRK06777 239 EVQTGFARTG-K-LFAMEYYDV-----KPD--LI--TMAKSLG-GGMPISAVVG-RAEVMDAPAPGGLGGTYAGNPLAVA 305 (421)
T ss_pred chhhCCccCC-c-hhhhhhcCC-----CCC--EE--eeehhhc-CCCceEEEEE-cHHHHhccCCCCCCCCCCcCHHHHH
Confidence 9999864444 2 223222211 123 22 7999999 9999999999 466665543221 12346888888
Q ss_pred HHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC----C-ceeecCCceEEEeeecCchh-hccChHHHHHHHHHHH
Q 011570 317 LIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV----G-IGCLKSNAGLFLWMDLHHLL-KEQTYEAEMALWRVII 390 (483)
Q Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----g-i~~~~~~~g~f~~~~l~~~~-~~~~~~~~~~~~~~Ll 390 (483)
++.+.|+.. ++ ....++++++.+++.+.|+++ + +....+.|.+|. +.+.... ......-...+...++
T Consensus 306 aa~a~L~~~---~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~-i~~~~~~~~~~~~~~~~~l~~~~~ 379 (421)
T PRK06777 306 AALAVLDVI---AE--EKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVA-VEFNDPQTGKPSPEFTRQYQRQAL 379 (421)
T ss_pred HHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEE-EEEecCccCCccHHHHHHHHHHHH
Confidence 888877521 11 234445556666666666553 2 334566776554 4442210 0011111223444445
Q ss_pred HhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHH
Q 011570 391 NEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFML 435 (483)
Q Consensus 391 ~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~ 435 (483)
++||.+.|+..|+ +++||++.. .+++++++++++|.+++.
T Consensus 380 -~~Gv~i~~~~~~g----~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 380 -EEGLLLLSCGVHG----NVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred -hCCeEEeecCCCC----CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 4699999987663 589999965 599999999999998874
No 251
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.78 E-value=7.6e-16 Score=157.25 Aligned_cols=312 Identities=12% Similarity=0.078 Sum_probs=181.4
Q ss_pred HHHHHHHHHHHhhhCCCCCcC-CCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCc--------
Q 011570 98 EFRNAVAKFMGKVRGNRITFD-PDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGV-------- 166 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~-~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~-------- 166 (483)
+....+|+.+.+..+ -. .+.+++++++++++..++.... ....+|+....+|.+.........|.
T Consensus 83 ~~~~~la~~l~~~~p----~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~ 158 (425)
T PRK07495 83 ENYVRLAERLNALVP----GDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGF 158 (425)
T ss_pred HHHHHHHHHHHHhCC----CCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCC
Confidence 344556666554322 11 2589999999999999886542 22357888888887654222111110
Q ss_pred -----EEEEeecCCCCCcccC----HHHHHHHHHHHHhcCCceeEEEEeCC-CCCCc-CCCCHHHHHHHHHHHhhcCcEE
Q 011570 167 -----QLVPVVCDSSNDFKVT----MEALEAAYEKAQESNIRIKGVLITNP-SNPLG-TFLDRETLKDIVSFINEKNIHL 235 (483)
Q Consensus 167 -----~~~~v~~~~~~~~~~d----~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG-~~~~~~~l~~i~~~a~~~~~~i 235 (483)
.++.+|.+... ...+ ++.+++.+.+. ..+.++.+|++... +| +| .++|.+.+++|.++|++||+++
T Consensus 159 ~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~~~~-~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~ll 235 (425)
T PRK07495 159 GAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLFKAD-VDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILL 235 (425)
T ss_pred CCCCCCeEEecCCccc-ccccHHHHHHHHHHHHHhc-cCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEE
Confidence 12333332111 1122 33445554321 11235666655533 45 78 4579999999999999999999
Q ss_pred EEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh--hhcCCCChH
Q 011570 236 VCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM--SSFGLVSSQ 313 (483)
Q Consensus 236 I~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~--~~~~~~s~~ 313 (483)
|+||+|.++...+ . +...... +.+.-+.||||.++ +|+|+|++++ ++++.+.+... ...+..+++
T Consensus 236 I~DEv~tG~gr~G-~-~~a~~~~---------gv~pDi~tlsK~l~-~G~pigav~~-~~~i~~~~~~~~~~~T~~~~pl 302 (425)
T PRK07495 236 IADEVQTGFARTG-K-LFAMEHH---------EVAADLTTMAKGLA-GGFPLAAVTG-RAEIMDAPGPGGLGGTYGGNPL 302 (425)
T ss_pred EEechhhcCCcCC-C-ceeeccc---------CCCCCEEeehhhhc-CCccceEEEE-cHHHHhccCCCCcCCCCCCCHH
Confidence 9999998753433 2 2121111 22223569999998 9999999999 55665544321 122346778
Q ss_pred HHHHHHHhc---CChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhh-ccChHHHHHHHHHH
Q 011570 314 TQHLIATML---SDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLK-EQTYEAEMALWRVI 389 (483)
Q Consensus 314 ~q~~~~~~l---~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~-~~~~~~~~~~~~~L 389 (483)
+++++.+.+ .+++ +.++.+++.++++++.+.+.+.+ +.......-|+++|+++..... .........+...+
T Consensus 303 ~~aaa~a~l~~l~~~~-l~~~~~~~g~~l~~~L~~l~~~~---~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~ 378 (425)
T PRK07495 303 GIAAAHAVLDVIEEED-LCERANQLGNRLKQRLASLRETV---PEIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKA 378 (425)
T ss_pred HHHHHHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHhhC---CCeeeeecCceEEEEEEecCCCCCccHHHHHHHHHHH
Confidence 877544443 3333 23344444444444433333322 2111122337899999853211 00111123455556
Q ss_pred HHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 390 INEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 390 l~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+ ++||++.+... ..+.+||.... ++++++++++++|.+++++.+
T Consensus 379 ~-~~Gvl~~~~g~----~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 379 L-EKGLILLTCGV----HGNVIRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred H-HCCeEEeecCC----CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 6 56999875321 13679999876 599999999999999997654
No 252
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.78 E-value=7e-16 Score=154.21 Aligned_cols=287 Identities=21% Similarity=0.238 Sum_probs=179.8
Q ss_pred ccCCCCC--CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh--
Q 011570 88 AIFQDYH--GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR-- 163 (483)
Q Consensus 88 ~~Y~~~~--g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-- 163 (483)
..|+... -...|.+.||+..+ .+.+++++++..|+..++.+++++||+|+++...|.+....++..
T Consensus 47 ~~Y~R~gnPt~~~le~~la~Le~----------g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~ 116 (386)
T PF01053_consen 47 YIYSRYGNPTVRALEQRLAALEG----------GEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLP 116 (386)
T ss_dssp CSBTTTC-HHHHHHHHHHHHHHT-----------SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHH
T ss_pred cceeccccccHHHHHHHHHHhhc----------ccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhc
Confidence 3565542 12355555555543 478999999999999999999999999999999998877666542
Q ss_pred -cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcC-cEEEEcccc
Q 011570 164 -TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKN-IHLVCDEIY 241 (483)
Q Consensus 164 -~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~-~~iI~Deay 241 (483)
.|+++..++. -|++++++++++ ++++|++.+|.||+..+.+ +++|+++|+++| +++|+|..+
T Consensus 117 ~~gv~v~~~d~-------~d~~~l~~~l~~------~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~ 180 (386)
T PF01053_consen 117 RFGVEVTFVDP-------TDLEALEAALRP------NTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTF 180 (386)
T ss_dssp HTTSEEEEEST-------TSHHHHHHHHCT------TEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTT
T ss_pred ccCcEEEEeCc-------hhHHHHHhhccc------cceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccc
Confidence 4899888753 378999999874 8999999999999988888 899999999998 999999999
Q ss_pred ccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccC-CCCceEEEEEecC-hHHHHHHHHhh-hcC-CCChHHHHH
Q 011570 242 AATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG-FPGFRVGIIYSYN-DQVVSCARKMS-SFG-LVSSQTQHL 317 (483)
Q Consensus 242 ~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~li~~~-~~l~~~~~~~~-~~~-~~s~~~q~~ 317 (483)
+...+- . + + ..+..|++.|.+|.++ -...=.|.+++.+ +.+.+.++... ..+ .+++.....
T Consensus 181 atp~~~--~---p---L-------~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~l 245 (386)
T PF01053_consen 181 ATPYNQ--N---P---L-------ELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWL 245 (386)
T ss_dssp THTTTC------G---G-------GGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHH
T ss_pred cceeee--c---c---C-------cCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHH
Confidence 653221 1 1 1 1244578899999885 2334477888765 46665554433 233 234444344
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cce-eecC----------------CceEEEeeecCchhhccCh
Q 011570 318 IATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIG-CLKS----------------NAGLFLWMDLHHLLKEQTY 379 (483)
Q Consensus 318 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~-~~~~----------------~~g~f~~~~l~~~~~~~~~ 379 (483)
+..-++. +..+.++..++...+.+.|+++ .+. ++.| .+|-.+.+++....
T Consensus 246 l~rgl~T-------l~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~----- 313 (386)
T PF01053_consen 246 LLRGLRT-------LPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGE----- 313 (386)
T ss_dssp HHHHHTT-------HHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHH-----
T ss_pred HhcCCCc-------HHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccch-----
Confidence 4444443 3445566677888899999887 342 3333 22236677777532
Q ss_pred HHHHHHHHHHHHhcCeEeeCCCCCCC-------------------------CCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 380 EAEMALWRVIINEVKLNVSPGSSFHC-------------------------PNPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 380 ~~~~~~~~~Ll~~~gV~v~pg~~f~~-------------------------~~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
+-+..+++.-.+. ..|..+|. -.++.||||+|. |+.+.+++.|++++
T Consensus 314 ----~~~~~f~~~l~l~-~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl---Ed~~dLi~Dl~~AL 385 (386)
T PF01053_consen 314 ----EAARRFLDALKLF-SIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL---EDPDDLIADLEQAL 385 (386)
T ss_dssp ----HHHHHHHHH-SSS-EESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S---S-HHHHHHHHHHHH
T ss_pred ----hhhHhHHhhhhhH-hhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc---CCHHHHHHHHHHhc
Confidence 1122333332321 11212221 124679999994 56777888887776
Q ss_pred H
Q 011570 435 L 435 (483)
Q Consensus 435 ~ 435 (483)
+
T Consensus 386 ~ 386 (386)
T PF01053_consen 386 E 386 (386)
T ss_dssp H
T ss_pred C
Confidence 4
No 253
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=3.2e-16 Score=159.80 Aligned_cols=156 Identities=17% Similarity=0.222 Sum_probs=123.6
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhh---hcCcEEEEee
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRW---RTGVQLVPVV 172 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~---~~G~~~~~v~ 172 (483)
..+|++.+|++.+ .+..++|+++++|+.+++.+++++||+|+++...|......+.. ..|++++.++
T Consensus 66 ~~~le~~lA~l~g----------~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd 135 (433)
T PRK08134 66 VAVLEERVAALEG----------GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVK 135 (433)
T ss_pred HHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEEC
Confidence 5788888888876 23468899999999999999999999999999999866554432 1399988887
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
.+ |++.++++|++ ++++|++.+|+||||.+.+ +++|+++|+++|+++|+|.++..... .
T Consensus 136 ~~-------d~~~l~~~i~~------~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~-~---- 194 (433)
T PRK08134 136 PG-------DIDGWRAAIRP------NTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL-L---- 194 (433)
T ss_pred CC-------CHHHHHHhcCC------CCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc-C----
Confidence 53 68899998864 8999999999999999999 88889999999999999999864221 1
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEe
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYS 292 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~ 292 (483)
.++ .+ ...+++.|.+|.+|-+|-.+|.++.
T Consensus 195 ~pl-~~---------GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 195 RPF-EH---------GADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred Cch-hc---------CCCEEEeccccccCCCCCceEEEEE
Confidence 121 12 4457888999999877776776654
No 254
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.77 E-value=2.6e-17 Score=153.56 Aligned_cols=349 Identities=18% Similarity=0.241 Sum_probs=235.7
Q ss_pred CCCCCCCCCcccccchh------hhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhC
Q 011570 39 YHPTKNPNGVIQMGLAE------NLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRG 112 (483)
Q Consensus 39 ~~~~~~~~~~i~l~~~~------n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g 112 (483)
|..+.||.. |||+.+. .++.++.++++-.+... .+..-.|-+..|.+++.+..+++.-..
T Consensus 46 fk~D~n~~K-iNLgvGaYRdd~gKp~vL~~VrkAE~ql~~-----------~~ldKEYlpI~Gl~eF~k~sakLa~G~-- 111 (427)
T KOG1411|consen 46 FKKDPNPKK-INLGVGAYRDDNGKPYVLPSVRKAEQQLAS-----------LSLDKEYLPITGLAEFNKLSAKLALGD-- 111 (427)
T ss_pred HhcCCCcce-eeecccceecCCCCeeeeHHHHHHHHHHhh-----------hcccchhccccchHHHHHHHHHHhhcC--
Confidence 345566655 7888873 23345666655443211 112236889999999999999986422
Q ss_pred CCCC-cCCCcEEE--eCChhHHHHHHHHHh--cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHH
Q 011570 113 NRIT-FDPDRIVM--SGGATGAHETVAFCL--ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALE 187 (483)
Q Consensus 113 ~~~~-~~~~~i~i--t~G~~~al~~~~~~l--~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~ 187 (483)
..+ +....|+. |-++|.++.+....+ .-++..|.+++|+|+.....++.. |+.+..+..-+...-.+|.+.+.
T Consensus 112 -~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~a-g~~~~~yrYyd~~t~gld~~g~l 189 (427)
T KOG1411|consen 112 -NSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDA-GLPVKFYRYYDPKTRGLDFKGML 189 (427)
T ss_pred -CchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCcccccc-CcceeeeeeccccccccchHHHH
Confidence 122 23334444 344566666554333 457889999999999999988886 99987777655556678988888
Q ss_pred HHHHHHHhcCCceeEEEEeCC--CCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCC-CCCcchHHHhhhhccc
Q 011570 188 AAYEKAQESNIRIKGVLITNP--SNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTK-ESSFVSIAEIIDQDIA 264 (483)
Q Consensus 188 ~~i~~~~~~~~~~~~i~l~~P--~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~-~~~~~s~~~l~~~~~~ 264 (483)
+.+.+. ....+++++. |||||.-.+.|++++|.++.++.+.+-+.|-+|.++.-+. +....++.-+.+
T Consensus 190 edl~~~-----p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~---- 260 (427)
T KOG1411|consen 190 EDLGEA-----PEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVE---- 260 (427)
T ss_pred HHHhcC-----CCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHH----
Confidence 877653 2234555554 9999999999999999999999999999999999853222 111123333433
Q ss_pred cCCCeEEEEecCccccCCCCceEEEE--EecChHHHHHHH----H-hhhc-CCCChHHHHHHHHhcCChhHHHHHHHH--
Q 011570 265 CNRNLIHIVYSLSKDMGFPGFRVGII--YSYNDQVVSCAR----K-MSSF-GLVSSQTQHLIATMLSDDQFVEKFIAE-- 334 (483)
Q Consensus 265 ~~~~~vi~~~S~SK~~g~~GlRiG~l--i~~~~~l~~~~~----~-~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~-- 334 (483)
+..++++..||.|.+|+-|=|+|.+ ++.+++....+. . .++. .+++.-...+++.+|.+.+...+|..+
T Consensus 261 -~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk 339 (427)
T KOG1411|consen 261 -DGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVK 339 (427)
T ss_pred -cCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHH
Confidence 4577888999999999999999944 555544443322 2 2222 223333556778888887665555544
Q ss_pred -HHHHHHHHHHHHHHhhhcCC----ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCC
Q 011570 335 -SAKRIAERHKAFTWGLSQVG----IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPG 409 (483)
Q Consensus 335 -~~~~l~~~~~~l~~~L~~~g----i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~ 409 (483)
+.+++...|+.|.+.|+..| |..+..+-|+|.+--+.. +-.+.|.+++.|++. .+
T Consensus 340 ~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~p-----------eQv~~l~ke~~iYmT--------~d- 399 (427)
T KOG1411|consen 340 GMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLNP-----------EQVDWLTKEYHIYLT--------KD- 399 (427)
T ss_pred HHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCCH-----------HHHHHHHhhheeeec--------cC-
Confidence 56788888899999998764 444556678898765543 345677788888865 23
Q ss_pred EEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 410 WFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 410 ~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
=|||++..+...+..+.++|.++.
T Consensus 400 -GRiS~aG~ss~nV~yLa~aih~vt 423 (427)
T KOG1411|consen 400 -GRISMAGLSSSNVPYLADAIHAVT 423 (427)
T ss_pred -ceEeeccccccCCcccchhhHhHh
Confidence 389998777677777777766543
No 255
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=5.8e-16 Score=157.79 Aligned_cols=157 Identities=20% Similarity=0.252 Sum_probs=118.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhh---hcCcEEEEee
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRW---RTGVQLVPVV 172 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~---~~G~~~~~v~ 172 (483)
...|++.+|++.+ .+..+++++++.|+..++.+++++||+|+++...|......+.. ..|++++.++
T Consensus 71 ~~~Le~~lA~l~g----------~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd 140 (436)
T PRK07812 71 QDVVEQRIAALEG----------GVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE 140 (436)
T ss_pred HHHHHHHHHHHhC----------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC
Confidence 4677888887765 24567777888899999999999999999999888776543322 1377777774
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
+. .|++.+++++++ ++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|++++.... .
T Consensus 141 -d~-----~d~e~l~~ai~~------~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~-~---- 200 (436)
T PRK07812 141 -DP-----DDLDAWRAAVRP------NTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL-I---- 200 (436)
T ss_pred -CC-----CCHHHHHHhCCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-C----
Confidence 21 278889888753 7899999999999999999 78888899999999999999863211 1
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEe
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYS 292 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~ 292 (483)
.++ . ....+++.|++|.+|-.|--+|.++.
T Consensus 201 ~pl-~---------~GaDivv~S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 201 RPL-E---------HGADIVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred Cch-h---------cCCCEEEEecccccCCCCCeEEEEEE
Confidence 111 1 13446779999999877766776666
No 256
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.76 E-value=1.4e-16 Score=155.31 Aligned_cols=165 Identities=25% Similarity=0.318 Sum_probs=136.9
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-CCCC----eEEEeCCCCcChHHHHhhh--cCcE
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-DPGD----AFLVPTPYYPGFDRDLRWR--TGVQ 167 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-~~gd----~Vlv~~P~y~~~~~~~~~~--~G~~ 167 (483)
+..+.|+.+|++++ .++.+|++|+|+|+++++++..+. ..+| +|++..-.|+.....++.+ .|.+
T Consensus 86 ~~E~aR~~VAklIn--------Ad~~dIiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~ 157 (428)
T KOG1549|consen 86 AVEAAREQVAKLIN--------ADPSDIVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLE 157 (428)
T ss_pred HHHHHHHHHHHHhC--------CCCCcEEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeE
Confidence 46789999999988 578889999999999999998863 3566 8999988888776655433 3899
Q ss_pred EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccC
Q 011570 168 LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFT 247 (483)
Q Consensus 168 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~ 247 (483)
++.+|++. +..+|++.+++.|+. +|++|.+...||-+|.+.| +++|.++|+++++.+++|.+++ .+
T Consensus 158 Vt~lpv~~--~~~~d~~~~~~~i~~------~T~lv~I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQa---vG 223 (428)
T KOG1549|consen 158 VTYLPVED--SGLVDISKLREAIRS------KTRLVSIMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQA---VG 223 (428)
T ss_pred EEEeccCc--cccccHHHHHHhcCC------CceEEEEEecccCcccccc---HHHHHHHhCcCCcEEEeehhhh---cC
Confidence 99999884 457899999999975 9999999999999999999 8889999999999999999997 33
Q ss_pred CCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecC
Q 011570 248 KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYN 294 (483)
Q Consensus 248 ~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~ 294 (483)
.-..++.++ +..++..|.+|.||.+| +|++++.+
T Consensus 224 --~i~vDV~el---------n~D~~s~s~HK~ygp~~--iGaLYvr~ 257 (428)
T KOG1549|consen 224 --KIPVDVQEL---------NADFLSISAHKIYGPPG--IGALYVRR 257 (428)
T ss_pred --CccccHHHc---------CchheeeecccccCCCc--ceEEEEcc
Confidence 333565555 34456679999999999 99999964
No 257
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.76 E-value=2.3e-15 Score=147.51 Aligned_cols=303 Identities=18% Similarity=0.213 Sum_probs=210.7
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCC-CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC--hHHHHhhhcCcEEEEeec
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDP-DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPG--FDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~-~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~--~~~~~~~~~G~~~~~v~~ 173 (483)
..+-+.+.+.+...++ .+. +-++++.+++.++...+..+++|||+|++...+..+ +.+.++.+ |.+++.+..
T Consensus 37 ~~~~~~~~~~L~~v~~----t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R~~~ia~~~-g~~v~~~~~ 111 (383)
T COG0075 37 VGIMKEVLEKLRKVFG----TENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGERFAEIAERY-GAEVVVLEV 111 (383)
T ss_pred HHHHHHHHHHHHHHhc----CCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHHHHHHHHHh-CCceEEEeC
Confidence 4444444444544444 233 456677889999999999999999999999887533 34555654 999998887
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcc
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFV 253 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~ 253 (483)
++ +-.+|+++++++|++ ++++++|.+++.-.+||...+ +++|+++|++||.++|+|.+-+ +++ .+ .
T Consensus 112 ~w--g~~v~p~~v~~~L~~----~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~g~l~iVDaVsS---~Gg-~~-~ 177 (383)
T COG0075 112 EW--GEAVDPEEVEEALDK----DPDIKAVAVVHNETSTGVLNP---LKEIAKAAKEHGALLIVDAVSS---LGG-EP-L 177 (383)
T ss_pred CC--CCCCCHHHHHHHHhc----CCCccEEEEEeccCcccccCc---HHHHHHHHHHcCCEEEEEeccc---CCC-cc-c
Confidence 65 346899999999984 457889999999999999998 8889999999999999999976 555 33 2
Q ss_pred hHHHhhhhccccCCCeEEEEecCccccCC-CCceEEEEEecChHHHHHHH---------------Hhhh---c-CCCChH
Q 011570 254 SIAEIIDQDIACNRNLIHIVYSLSKDMGF-PGFRVGIIYSYNDQVVSCAR---------------KMSS---F-GLVSSQ 313 (483)
Q Consensus 254 s~~~l~~~~~~~~~~~vi~~~S~SK~~g~-~GlRiG~li~~~~~l~~~~~---------------~~~~---~-~~~s~~ 313 (483)
.+. ++...+++.+--|.++. || .|.+..+++.+..... .+.. + .+.+..
T Consensus 178 ~vd---------~wgiDv~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~ 246 (383)
T COG0075 178 KVD---------EWGIDVAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVN 246 (383)
T ss_pred chh---------hcCccEEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHH
Confidence 222 34566778899999874 55 6788775443332211 1111 1 222223
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC---ceEEEeeecCchhhccChHHHHHHHHHHH
Q 011570 314 TQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN---AGLFLWMDLHHLLKEQTYEAEMALWRVII 390 (483)
Q Consensus 314 ~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~---~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll 390 (483)
...++..+|+.- .++-++.+.+++++..+.+++.++++|++.+... ..-...+.+|.+.+.. +....++
T Consensus 247 ~i~aL~~al~~i--~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~g~~~~------~~~~~~~ 318 (383)
T COG0075 247 LIYALREALDLI--LEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAIKVPEGVDDK------KVRRALL 318 (383)
T ss_pred HHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEECCCCCCcH------HHHHHHH
Confidence 333444444321 1222566777888889999999999999877622 2224455666654422 3334788
Q ss_pred HhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 391 NEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 391 ~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
+++||.+.+|.. ......+||+... .+..++..++.+|..++.+...
T Consensus 319 ~~~g~~i~gg~~--~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 319 KEYGVEIAGGQG--PLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGV 366 (383)
T ss_pred HhCCEEeccccc--ccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCC
Confidence 889999988753 3345689999955 6999999999999999988754
No 258
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.75 E-value=6.5e-17 Score=147.81 Aligned_cols=298 Identities=15% Similarity=0.118 Sum_probs=198.0
Q ss_pred ccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcC
Q 011570 86 GIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTG 165 (483)
Q Consensus 86 ~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G 165 (483)
-+.+|.+. +..|...||+|.+ .|+.++-+.+-.+...++-+++.|.|.|+..+-.+.+..+.++.. .
T Consensus 106 fIcGtq~i--Hk~LE~kiAqfh~----------rED~ilypscfdANag~feail~pedAvfSDeLNhASIIdGirLc-k 172 (417)
T KOG1359|consen 106 FICGTQDI--HKLLESKIAQFHG----------REDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLC-K 172 (417)
T ss_pred EEecchHH--HHHHHHHHHHHhC----------CCceEEeccccccchHHHHHhcChhhhhhccccccchhhhhhHHH-h
Confidence 34566654 5889999999876 345555566667777888889999999999999998887776653 2
Q ss_pred cEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc
Q 011570 166 VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV 245 (483)
Q Consensus 166 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~ 245 (483)
+ --.+|+-.++..+.+... .+-|+|+....-...|.+.| +++|..++++||.++++||+|+-.+
T Consensus 173 -r----------y~h~dv~~l~~~l~~a~k--~r~klv~TDg~FSMDGdiaP---l~ei~~La~kYgaLlfiDecHaTgf 236 (417)
T KOG1359|consen 173 -R----------YRHVDVFDLEHCLISACK--MRLKLVVTDGVFSMDGDIAP---LEEISQLAKKYGALLFIDECHATGF 236 (417)
T ss_pred -h----------hccchhHHHHHHHHHhhh--heEEEEEecceeccCCCccc---HHHHHHHHHhcCcEEEEeeccccee
Confidence 0 113567777766654322 25666655556788999999 8888888999999999999999887
Q ss_pred cCCCCCcchHHHhhhhccccCCCeEEEEecCccccC-CCCceEEEEEecChHHHHHHHHh-hhcCCCCh--H-----HHH
Q 011570 246 FTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG-FPGFRVGIIYSYNDQVVSCARKM-SSFGLVSS--Q-----TQH 316 (483)
Q Consensus 246 ~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~li~~~~~l~~~~~~~-~~~~~~s~--~-----~q~ 316 (483)
++. .. ....+... +..+..|+.++++|++| +.| ||..+ +..++..++.. ++|...++ + +..
T Consensus 237 ~G~-tG-rGt~E~~~----vm~~vdiinsTLgKAlGga~G---Gyttg-p~~li~llrqr~RpylFSnslppavV~~a~k 306 (417)
T KOG1359|consen 237 FGE-TG-RGTAEEFG----VMGDVDIINSTLGKALGGASG---GYTTG-PKPLISLLRQRSRPYLFSNSLPPAVVGMAAK 306 (417)
T ss_pred ecC-CC-CChHHHhC----CCCcceehhhhhhhhhcCCCC---CCccC-ChhHHHHHHhcCCceeecCCCChhhhhhhHH
Confidence 765 22 23333332 13466788899999987 555 99999 56666666543 34422222 1 112
Q ss_pred HHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeE
Q 011570 317 LIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLN 396 (483)
Q Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~ 396 (483)
+...++.+. ......+.+.+++++.++..|+++..... ..+-+-+.+. .....++.+||+. ||.
T Consensus 307 a~dllm~s~--------~~i~~~~a~~qrfr~~me~aGftIsg~~h-PI~pv~lGda------~lA~~~ad~lLk~-Gi~ 370 (417)
T KOG1359|consen 307 AYDLLMVSS--------KEIQSRQANTQRFREFMEAAGFTISGASH-PICPVMLGDA------RLASKMADELLKR-GIY 370 (417)
T ss_pred HHHHHHhhH--------HHHHHHHHHHHHHHHHHHhcCceecCCCC-CccceecccH------HHHHHHHHHHHhc-Cce
Confidence 222222221 22234466677888888888988765332 2333333321 2244778889965 999
Q ss_pred eeCCCCCCCC-CCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 397 VSPGSSFHCP-NPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 397 v~pg~~f~~~-~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
|..-+..-.+ +.-.+|+.++. .++|+++++++++.++.+..+
T Consensus 371 Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 371 VIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred EEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhc
Confidence 8765544333 33469999976 599999999999998877654
No 259
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.75 E-value=2.1e-15 Score=155.12 Aligned_cols=295 Identities=12% Similarity=0.032 Sum_probs=170.9
Q ss_pred CCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCc-------------EEEEeecCCCC--Ccc-
Q 011570 119 PDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGV-------------QLVPVVCDSSN--DFK- 180 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~-------------~~~~v~~~~~~--~~~- 180 (483)
.+.+++++++++++..++.... .....|+...-+|.+.........+. .+..+|.+... .+.
T Consensus 103 ~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (433)
T PRK08117 103 LDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGE 182 (433)
T ss_pred CCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccC
Confidence 4689999999999999887531 12356888888776644322111010 11222222100 000
Q ss_pred -------cCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 181 -------VTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 181 -------~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
-+++.+++.+++.. .+.++.+|++.......|.+. +.+.++++.++|++||+++|+||+|.++...+ ..
T Consensus 183 ~~~~~~~~~~~~l~~~~~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G-~~- 259 (433)
T PRK08117 183 DPEVCFLECLRDLESLFKHQV-TPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTG-EW- 259 (433)
T ss_pred chhHHHHHHHHHHHHHHHhcc-CCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccc-cc-
Confidence 14555666654311 123565555554455567764 78889999999999999999999999753433 22
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHH
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEK 330 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~ 330 (483)
.....+ +...-+.||||.+| +|+++|++++ ++.+.+.+..... ....+++++.++.+.|+... .
T Consensus 260 ~~~~~~---------gv~pDi~t~sK~lg-~G~pigav~~-~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~--~- 325 (433)
T PRK08117 260 FAAQTF---------GVVPDIMTIAKGIA-SGLPLSAVVA-SKELMEQWPLGSHGTTFGGNPVACAAALATLEVIK--E- 325 (433)
T ss_pred hhHhhc---------CCCCCEeehhhhcc-CCCcceeEEE-cHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH--h-
Confidence 111111 11111359999999 9999999999 4555554432111 12357778777777765311 0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc----CCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC
Q 011570 331 FIAESAKRIAERHKAFTWGLSQ----VGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP 406 (483)
Q Consensus 331 ~~~~~~~~l~~~~~~l~~~L~~----~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~ 406 (483)
....+.+++..+++.+.|++ +++....+..|+++++++..............+...++ ++||.+.+.. .
T Consensus 326 --~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g----~ 398 (433)
T PRK08117 326 --EKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCL-EKGLLFYLCG----N 398 (433)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHH-HCCCEEeecC----C
Confidence 11222233333444444433 33333344556788888753211111112234555555 5699887632 1
Q ss_pred CCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 407 NPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 407 ~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
..+++|+++.. ++++++++++++|.+++++.
T Consensus 399 ~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 399 AGNVLRMIPPLTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 24689999754 69999999999999998764
No 260
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.75 E-value=2.9e-15 Score=152.71 Aligned_cols=309 Identities=15% Similarity=0.087 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHHhhhCCCCCc-CCCcEEE-eCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCc------
Q 011570 97 PEFRNAVAKFMGKVRGNRITF-DPDRIVM-SGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGV------ 166 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~-~~~~i~i-t~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~------ 166 (483)
.+.+..+|+.+.+... .+. ..+.+++ ++++++++..++.... ....+|+....+|++.........|.
T Consensus 77 ~~~~~~lae~l~~~~~--~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~ 154 (412)
T TIGR02407 77 TEAKREFLETFNEIIL--KPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQG 154 (412)
T ss_pred cHHHHHHHHHHHHhcc--CccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccC
Confidence 4455566666554310 000 1125666 4899999998887642 22367999898887765433222121
Q ss_pred ------EEEEeecCCCCCc-ccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcC-CCCHHHHHHHHHHHhhcCcEEEEc
Q 011570 167 ------QLVPVVCDSSNDF-KVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGT-FLDRETLKDIVSFINEKNIHLVCD 238 (483)
Q Consensus 167 ------~~~~v~~~~~~~~-~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~-~~~~~~l~~i~~~a~~~~~~iI~D 238 (483)
.++.+|.++.... .-+++.+++.+.+......++.+|++....++.|. +.+.+.+++|.++|++||+++|+|
T Consensus 155 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D 234 (412)
T TIGR02407 155 AGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVD 234 (412)
T ss_pred CCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 2233332210000 02366677777542111124666665544788898 578999999999999999999999
Q ss_pred cccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC-CceEEEEEecChHHHHHHHHh--hhcCCCChHHH
Q 011570 239 EIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP-GFRVGIIYSYNDQVVSCARKM--SSFGLVSSQTQ 315 (483)
Q Consensus 239 eay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~-GlRiG~li~~~~~l~~~~~~~--~~~~~~s~~~q 315 (483)
|++.++...+ . +...... . . .+| +.++||.+| + |+|+|+++++++ + ..+... ...+..++++.
T Consensus 235 EV~tG~GRtG-~-~~a~~~~-~-v---~PD----i~~~~K~lg-~~G~pigav~~~~~-~-~~~~~~~~~~T~~gnpl~~ 300 (412)
T TIGR02407 235 DIQAGCGRTG-T-FFSFEPA-G-I---EPD----IVCLSKSIS-GYGLPLALTLIKPE-L-DVWKPGEHNGTFRGNNLAF 300 (412)
T ss_pred chhhCCCccc-h-hHHhccc-C-C---CCC----EEEechhcc-CCccceeEEEEchh-h-hccCCCccCCCCCccHHHH
Confidence 9998642222 1 1111111 1 0 223 236899998 7 999999999543 4 322211 11122455533
Q ss_pred HH---HHH-hcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHH
Q 011570 316 HL---IAT-MLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIIN 391 (483)
Q Consensus 316 ~~---~~~-~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~ 391 (483)
.+ +.. ++.+++. .++.++..+.++++.+.+.+.+.. +.......|+++|++++... ....+...++
T Consensus 301 aaa~a~l~~~i~~~~l-~~~~~~~g~~l~~~l~~l~~~~~~--~~~~vrg~Gl~~~l~l~~~~------~~~~~~~~~~- 370 (412)
T TIGR02407 301 VTATAALEYYWSDDAF-EKAVQRKSEIIQERLDRIVAEYPE--LIKQVRGRGLMQGIECGDGD------LAGKIAKAAF- 370 (412)
T ss_pred HHHHHHHHHHhcccHH-HHHHHHHHHHHHHHHHHHHhhCCC--ceEeeecceeEEEEEecChH------HHHHHHHHHH-
Confidence 33 223 3444443 455556566666555544444321 33445567899999997521 1235666666
Q ss_pred hcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHH
Q 011570 392 EVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFML 435 (483)
Q Consensus 392 ~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~ 435 (483)
++||.+.+... ..+.+|++... .+++++++++++|+++++
T Consensus 371 ~~Gv~v~~~~~----~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 371 ENGLIIETSGP----NDEVIKLLPPLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred HCCCEEeccCC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 46999987432 23579999976 599999999999999875
No 261
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.74 E-value=1.7e-15 Score=138.99 Aligned_cols=333 Identities=16% Similarity=0.181 Sum_probs=213.8
Q ss_pred cccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCC
Q 011570 48 VIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGG 127 (483)
Q Consensus 48 ~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G 127 (483)
.+||-...-..|.+..++++.+... .-.-|+...-...|.+.+|+..+ ....+++++|
T Consensus 23 ~vDLRSDTvT~PTdeMr~am~eA~v-------------gDdVyGeD~tt~rLE~~vA~l~G---------KEAgLFv~SG 80 (384)
T KOG1368|consen 23 SVDLRSDTVTVPTDEMRRAMAEASV-------------GDDVYGEDPTTNRLEQRVAELFG---------KEAGLFVPSG 80 (384)
T ss_pred ccccccccccCChHHHHHHHhhccc-------------CcccccCCccHHHHHHHHHHHhC---------ccceeeeccc
Confidence 3566666555666777777655211 11236555557899999999987 3456888888
Q ss_pred hhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH--HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH--hcCCceeEE
Q 011570 128 ATGAHETVAFCLADPGDAFLVPTPYYPGFDRD--LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ--ESNIRIKGV 203 (483)
Q Consensus 128 ~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~--~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~--~~~~~~~~i 203 (483)
+...+-.++..+-+||..||+.+-+|-...+. +..+.|+.+.++...+ +..+++++++++++... -+.+.+++|
T Consensus 81 TmgNllaIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~--dgtm~ledIe~~ir~~~GD~H~p~T~LI 158 (384)
T KOG1368|consen 81 TMGNLLAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNEN--DGTMDLEDIEAAIRVPKGDCHMPPTKLI 158 (384)
T ss_pred ccccHHHHHHHhcCCCceEEeccchheeehhccChhhhccceeEeeeeCC--CCeeeHHHHHHhhcCCCCCccCCCceEE
Confidence 88777777777778999999998876433322 2223477777776544 45789999999998432 134678999
Q ss_pred EEeCCCCCCc-CCCCHHHHHHHHHHHhhcCcEEEEccccccCccCC-CCCcchHHHhhhhccccCCCeEEEEecCccccC
Q 011570 204 LITNPSNPLG-TFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTK-ESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG 281 (483)
Q Consensus 204 ~l~~P~NPtG-~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~-~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g 281 (483)
.+.|-+|-+| .++|.|++.++.++|++||+.+.+|.+-. |+. -..-.++..+.. ..|.|-+ .+||.+|
T Consensus 159 clENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi---~NAavasgV~vk~i~~-----~fDSVsi--CLSKglg 228 (384)
T KOG1368|consen 159 CLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARI---FNAAVASGVPVKKICS-----AFDSVSI--CLSKGLG 228 (384)
T ss_pred EeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhh---hhHHHHcCCCHHHHHH-----hhhhhhh--hhhccCC
Confidence 9999987776 99999999999999999999999999975 332 012255655554 2344433 7899998
Q ss_pred CCCceEEEEEecChHHHHHHHHhh-hcCCC-ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-ceee
Q 011570 282 FPGFRVGIIYSYNDQVVSCARKMS-SFGLV-SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVG-IGCL 358 (483)
Q Consensus 282 ~~GlRiG~li~~~~~l~~~~~~~~-~~~~~-s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~~ 358 (483)
.| +|-++..+..+++..+.++ .++.. -.....++++++.-.+- .. ..+.-.++...+.+.++..+ +++.
T Consensus 229 AP---VGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~~----~~-~L~~dHk~A~~lAe~~~~~~~i~v~ 300 (384)
T KOG1368|consen 229 AP---VGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDEN----VP-LLRADHKRAKELAEYINTPEEIRVE 300 (384)
T ss_pred CC---cccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhcc----hH-HHHHHHHHHHHHHHHhccccceeee
Confidence 55 7966665666655544433 33221 11111222222221111 12 12222445566677777664 7666
Q ss_pred cC-CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 359 KS-NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 359 ~~-~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
.+ -..+++.+.+... .+ ....+++.+. ++||.+.+|..+ .+|+.+-+ .++++++..+..+.+.+
T Consensus 301 v~a~etNiv~~~l~q~----~~-~~~~l~~~~~-k~gi~lm~~~s~------r~Rivlh~Qvt~~~ve~~~~~~~k~~ 366 (384)
T KOG1368|consen 301 VPAVETNIVNMVLCQA----RL-TAEELCKFLE-KNGILLMGGASR------RIRIVLHHQVTDEDVEYVKSVLSKKF 366 (384)
T ss_pred cchhhcceeeeecccc----cC-CHHHHHHHHH-HCCeEEeecccc------ceEEEEEEecCHHHHHHHHHHHHHHH
Confidence 54 3345777666321 11 1236666665 679999987543 49999976 69999999999995433
No 262
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.74 E-value=6e-17 Score=144.15 Aligned_cols=167 Identities=23% Similarity=0.269 Sum_probs=128.2
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChH-HHHhhhcCcEEEEeecC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFD-RDLRWRTGVQLVPVVCD 174 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~-~~~~~~~G~~~~~v~~~ 174 (483)
+.++++.++++++ .+++++++++|+++++..++.++.+++++|+++.|+|++.. ..+... |.++..++.+
T Consensus 2 ~~~~~~~l~~~~~--------~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-g~~~~~v~~~ 72 (170)
T cd01494 2 LEELEEKLARLLQ--------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELA-GAKPVPVPVD 72 (170)
T ss_pred HHHHHHHHHHHcC--------CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhc-CCEEEEeccC
Confidence 3678899998875 35789999999999999999999988999999999998888 666664 9999999987
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcch
Q 011570 175 SSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVS 254 (483)
Q Consensus 175 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s 254 (483)
..+....+.+.+++... +.+++++++++|+||+|...+ .++|.++|+++|+++|+|++|..+.... ..
T Consensus 73 ~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~-~~--- 140 (170)
T cd01494 73 DAGYGGLDVAILEELKA-----KPNVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPA-PG--- 140 (170)
T ss_pred CCCccchhhhhhhhccc-----cCceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccc-cc---
Confidence 54433333334443322 347899999999999999998 4778888889999999999998754332 11
Q ss_pred HHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEe
Q 011570 255 IAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYS 292 (483)
Q Consensus 255 ~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~ 292 (483)
.... ....++++.|++|.+|. .++|++++
T Consensus 141 -~~~~------~~~~d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 141 -VLIP------EGGADVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred -cccc------cccCCEEEEEcccccCC--CceEEEEe
Confidence 1111 22456778899999974 77999986
No 263
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.73 E-value=1e-14 Score=150.11 Aligned_cols=311 Identities=13% Similarity=0.071 Sum_probs=178.9
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcC-CCcEEEeCChhHHHHHHHHH---hcCCCCeEEEeCCCCcChHHHHhhhcCc-----
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFD-PDRIVMSGGATGAHETVAFC---LADPGDAFLVPTPYYPGFDRDLRWRTGV----- 166 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~-~~~i~it~G~~~al~~~~~~---l~~~gd~Vlv~~P~y~~~~~~~~~~~G~----- 166 (483)
..+.+..+|+.+.+..+ .. .+.+++++++++++..++.. ..+ .++|+...++|++.........+.
T Consensus 97 ~~~~~~~la~~l~~~~p----~~~~~~v~f~~sGseA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~~al~~~~~~~~~~ 171 (443)
T PRK06058 97 PYEGYVAVAEQLNRLTP----GDHEKRSALFNSGAEAVENAVKIARSYTG-RQAVVVFDHAYHGRTNLTMALTAKSMPYK 171 (443)
T ss_pred CCHHHHHHHHHHHHhCC----CCCCCEEEEeCCcHHHHHHHHHHHHHhhC-CCeEEEECCCcCcChHHHHhhcCCCcccc
Confidence 35666677777765432 11 25789999999999998874 333 378999999998876443322111
Q ss_pred --------EEEEeecCCC--C--CcccCH-HHHHHHHHHHHh--cCCceeEEEEeCCCCCCc-CC-CCHHHHHHHHHHHh
Q 011570 167 --------QLVPVVCDSS--N--DFKVTM-EALEAAYEKAQE--SNIRIKGVLITNPSNPLG-TF-LDRETLKDIVSFIN 229 (483)
Q Consensus 167 --------~~~~v~~~~~--~--~~~~d~-~~l~~~i~~~~~--~~~~~~~i~l~~P~NPtG-~~-~~~~~l~~i~~~a~ 229 (483)
.+..+|.... . ++..+. +.+++.++.... ...++.+|+ ..|-+..| .+ .+.+.+++|.++|+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~ 250 (443)
T PRK06058 172 SGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCR 250 (443)
T ss_pred cccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHH
Confidence 1122221110 0 000111 222222221111 123565554 66765554 43 35888999999999
Q ss_pred hcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--hc
Q 011570 230 EKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--SF 307 (483)
Q Consensus 230 ~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--~~ 307 (483)
+||+++|.||++.++...+ .. ... .... . .+| ++ +++|.+| .|+++|++++ ++++.+.+.... ..
T Consensus 251 ~~gillI~DEV~tGfgRtG-~~-fa~-~~~g-v---~PD-iv---~~gK~l~-~G~Pi~av~~-~~~i~~~~~~~~~~~T 317 (443)
T PRK06058 251 ENGVVFIADEVQTGFARTG-AW-FAC-EHEG-I---VPD-LI---TTAKGIA-GGLPLSAVTG-RAEIMDAPHPGGLGGT 317 (443)
T ss_pred HcCCEEEEeccccCCCcCh-hh-hHH-HhcC-C---CCC-EE---EEccccc-CCCccEEEEE-cHHHHhhccCCCCCCC
Confidence 9999999999998754333 22 221 1111 0 223 22 5689999 9999999999 556665543221 12
Q ss_pred CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC----Ccee-ecCCceEEEeeecCchh-hccChHH
Q 011570 308 GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV----GIGC-LKSNAGLFLWMDLHHLL-KEQTYEA 381 (483)
Q Consensus 308 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----gi~~-~~~~~g~f~~~~l~~~~-~~~~~~~ 381 (483)
+..++++++++.+.|+.-. + ....+.++++.+++.+.|+++ ++.. ..+.| .++.+.+.... .......
T Consensus 318 ~~gnpl~~aaa~a~L~~~~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G-~~~~i~~~~~~~~~~~~~~ 391 (443)
T PRK06058 318 YGGNPVACAAALAAIETIE--E---DDLVARARQIEALMTDRLRALAAEDDRIGDVRGRG-AMIAIELVKPGTTEPDAEL 391 (443)
T ss_pred CCCCHHHHHHHHHHHHHHH--H---cCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccc-eEEEEEEecCCCCCCcHHH
Confidence 3467888888777764311 1 122333444445555555442 3221 34444 45556653210 0011111
Q ss_pred HHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 382 EMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 382 ~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
...+...++ ++||.+.++..|+ +++|+..+. ++++++++++++|.+++++
T Consensus 392 ~~~l~~~~~-~~Gv~~~~~~~~~----~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 392 TKALAAAAH-AAGVIVLTCGTYG----NVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred HHHHHHHHH-HCCeEEeccCCCC----CEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 234555555 4699999875443 589998765 5999999999999998864
No 264
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.73 E-value=3.8e-15 Score=153.43 Aligned_cols=348 Identities=14% Similarity=0.098 Sum_probs=194.7
Q ss_pred CcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE--
Q 011570 47 GVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM-- 124 (483)
Q Consensus 47 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i-- 124 (483)
..|+|-.+||...+...+......... . .++ +.....|+...-+.++.+...+...+.++ ...+.+++
T Consensus 35 ~~l~liasen~~s~~v~~a~~s~~~~k--y-~~G---~~g~r~~~G~~~~d~lE~~~~~~~~~~f~----~~~~~~~~nv 104 (475)
T PLN03226 35 KGLELIASENFTSRAVMEALGSCLTNK--Y-SEG---LPGARYYGGNEYIDQIETLCQKRALEAFR----LDPEKWGVNV 104 (475)
T ss_pred cCeeEecCCccCCHHHHHHHhhHHhcc--c-cCC---CCCCcCcCCChhHHHHHHHHHHHHHHHhC----CCcceeEEec
Confidence 457888888887755444332221000 0 001 11112243333344554433333333333 34444444
Q ss_pred -eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH-HHhh----hcCcE----EEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 125 -SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR-DLRW----RTGVQ----LVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 125 -t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~-~~~~----~~G~~----~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
.++++.++..++.+|++|||+|+..+....++.. .... ..+.. ++++..+. .+..+|+++|++.+.+.
T Consensus 105 ~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~- 182 (475)
T PLN03226 105 QPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLF- 182 (475)
T ss_pred CcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhc-
Confidence 3566778888999999999999985532222211 1111 00121 22444443 34579999999998652
Q ss_pred hcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEe
Q 011570 195 ESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVY 274 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~ 274 (483)
++++|++ ..++ +|...+ +.+|.++|+++|+++++|+++....... ....+. + ....++++
T Consensus 183 ----~pklIv~-~~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~-~~~~~p--~--------~~~Div~~ 242 (475)
T PLN03226 183 ----RPKLIIA-GASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAA-QEAASP--F--------EYCDVVTT 242 (475)
T ss_pred ----CCeEEEE-ecCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccC-CCCCCC--C--------CCCeEEEe
Confidence 5676554 3444 677777 6678888999999999999997654443 211111 1 12347789
Q ss_pred cCccccCCCCceEEEEEecChH-------------HHHHHHHhhh--c-CCCChHHHHHHHHhcCChhHHHHHHHHHHHH
Q 011570 275 SLSKDMGFPGFRVGIIYSYNDQ-------------VVSCARKMSS--F-GLVSSQTQHLIATMLSDDQFVEKFIAESAKR 338 (483)
Q Consensus 275 S~SK~~g~~GlRiG~li~~~~~-------------l~~~~~~~~~--~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 338 (483)
|++|++ .|.+-|+++++++. +...+..... + +..+.....+++..+..- ...-.++.+++
T Consensus 243 t~hK~L--~GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i--~~~~~~~~~~~ 318 (475)
T PLN03226 243 TTHKSL--RGPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQA--MTPEFKAYQKQ 318 (475)
T ss_pred cCcccc--cCCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHH--hCcCHHHHHHH
Confidence 999998 33344888885432 1112221111 1 212222222223323211 01112445677
Q ss_pred HHHHHHHHHHhhhcCCceeecCC-ceEEEeeecC-chhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC---CCCCEEEE
Q 011570 339 IAERHKAFTWGLSQVGIGCLKSN-AGLFLWMDLH-HLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC---PNPGWFRV 413 (483)
Q Consensus 339 l~~~~~~l~~~L~~~gi~~~~~~-~g~f~~~~l~-~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~---~~~~~iRi 413 (483)
+.++.++|.+.|.+.|+++..+. .+..+++++. ..++. .-....|++.||.+..+..++. -.+..+|+
T Consensus 319 ~~~na~~L~~~L~~~G~~l~~~~t~~hi~lv~~~~~gi~~-------~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRi 391 (475)
T PLN03226 319 VKANAAALANRLMSKGYKLVTGGTDNHLVLWDLRPLGLTG-------SRVEKVLDLAHITLNKNAVPGDSSALVPGGVRI 391 (475)
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCCCCCEEEEEccCCCCCH-------HHHHHHHHHCCCEECCCCCCCCcccCCCCCccc
Confidence 88888999999998999887632 2346677773 22222 2244556678999987653322 12345888
Q ss_pred Ee-----ccCCHHHHHHHHHHHHHHHHHh
Q 011570 414 CF-----ANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 414 s~-----~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
+. ...++++++++.+.|.++++..
T Consensus 392 Gt~~lt~~g~~~~d~~~ia~~i~~~~~~~ 420 (475)
T PLN03226 392 GTPAMTSRGLVEKDFEKVAEFLHRAVTIA 420 (475)
T ss_pred CcHHHHHCCCCHHHHHHHHHHHHHHHHHh
Confidence 43 2257899999999999998854
No 265
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.73 E-value=1.1e-14 Score=149.22 Aligned_cols=295 Identities=15% Similarity=0.107 Sum_probs=170.3
Q ss_pred cEEE-eCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcC------------cEEEEeecCCCCCc-ccCHH
Q 011570 121 RIVM-SGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTG------------VQLVPVVCDSSNDF-KVTME 184 (483)
Q Consensus 121 ~i~i-t~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G------------~~~~~v~~~~~~~~-~~d~~ 184 (483)
.+++ ++++++++..++.... ....+|+....+|++.........| ..+..+|.+..... .-|++
T Consensus 104 ~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 183 (425)
T PRK09264 104 KVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLA 183 (425)
T ss_pred eEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHH
Confidence 5666 5899999998886642 2236788888888775432221111 02333333210000 02677
Q ss_pred HHHHHHHHHHhcCCceeEEEEeCCCCCCcC-CCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhcc
Q 011570 185 ALEAAYEKAQESNIRIKGVLITNPSNPLGT-FLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDI 263 (483)
Q Consensus 185 ~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~-~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~ 263 (483)
.+++.+.+......++.+|++.......|. +.+.+.+++|.++|++||+++|+||++.++...+ . +.......-
T Consensus 184 ~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG-~-~~~~~~~~v--- 258 (425)
T PRK09264 184 YLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTG-T-FFSFERAGI--- 258 (425)
T ss_pred HHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCcccc-H-HHHHhhcCC---
Confidence 888877643211124556655544555676 5688999999999999999999999998743322 1 112111110
Q ss_pred ccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH-h-hhcCCCChHHHHHHHHhc----CChhHHHHHHHHHHH
Q 011570 264 ACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK-M-SSFGLVSSQTQHLIATML----SDDQFVEKFIAESAK 337 (483)
Q Consensus 264 ~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~-~-~~~~~~s~~~q~~~~~~l----~~~~~~~~~~~~~~~ 337 (483)
.++ +-++||.+|..|+++|+++++ +.+. .+.. . ...+..++++..++.+.+ .+++ +.++++++.+
T Consensus 259 --~PD----i~t~~K~l~~~G~pigav~~~-~~i~-~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~-l~~~~~~~g~ 329 (425)
T PRK09264 259 --TPD----IVTLSKSISGYGLPMALVLIK-PELD-VWKPGEHNGTFRGNNLAFVTATAALEEYWSDDA-FEKEVKAKGE 329 (425)
T ss_pred --CCC----EEEeccccCCCccceEEEEEc-hhhh-ccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhH-HHHHHHHHHH
Confidence 223 237799999449999999995 4443 2211 1 111224555554443444 2222 2233333333
Q ss_pred HHHHHHHHHHHhhhcCC-ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEec
Q 011570 338 RIAERHKAFTWGLSQVG-IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFA 416 (483)
Q Consensus 338 ~l~~~~~~l~~~L~~~g-i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~ 416 (483)
.++++.+.+.+ +.+ +.......|+++|+.++.. .....+...++ ++||.+.++..+ ...||++..
T Consensus 330 ~l~~~l~~l~~---~~~~~~~~vrg~Gl~~~i~l~~~------~~~~~l~~~~~-~~Gv~~~~~~~~----~~~lr~~p~ 395 (425)
T PRK09264 330 LVRERLEEIAA---KYPGLGAEVRGRGMMQGIDFGDG------ELAGKIAAEAF-ENGLIIETSGPE----DEVVKLLPP 395 (425)
T ss_pred HHHHHHHHHHH---hCCCceecceecccEEEEEecCh------HHHHHHHHHHH-HCCCEEeccCCC----CCEEEEeCC
Confidence 33333222222 222 2122344578889998642 11235666666 459999875432 357899876
Q ss_pred c-CCHHHHHHHHHHHHHHHHHhhhccCc
Q 011570 417 N-MDDRTMEIALSRITSFMLKNVEAKVP 443 (483)
Q Consensus 417 ~-~~~e~l~~~l~~L~~~l~~~~~~~~~ 443 (483)
. .+++++++++++|.+++++..+++.+
T Consensus 396 l~~t~~ei~~~~~~l~~~l~~~~~~~~~ 423 (425)
T PRK09264 396 LTIDEEELEEGLDILEEAVAEVLAEEES 423 (425)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhcccc
Confidence 5 59999999999999999886554433
No 266
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=8.6e-15 Score=146.71 Aligned_cols=207 Identities=14% Similarity=0.116 Sum_probs=145.7
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH----hhhcCcEEEEee
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----RWRTGVQLVPVV 172 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----~~~~G~~~~~v~ 172 (483)
..|.+.||++-+ .+..+++++++.|+..++.+++++||+|+++...|.+....+ +. .|+++..++
T Consensus 65 ~~le~~la~LEg----------~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~-~Gi~v~~vd 133 (395)
T PRK08114 65 FSLQEAMCELEG----------GAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSK-LGVTTTWFD 133 (395)
T ss_pred HHHHHHHHHHhC----------CCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHh-cCcEEEEEC
Confidence 456666666432 567888888999999999999999999999999997776655 33 499988876
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc--CcEEEEccccccCccCCCC
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK--NIHLVCDEIYAATVFTKES 250 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~--~~~iI~Deay~~~~~~~~~ 250 (483)
. .|.+.+++++++ ++|+|++.+|+||||.+.+ +++|+++|+++ |+++|+|.+++...+
T Consensus 134 ~-------~d~~~l~~~l~~------~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~---- 193 (395)
T PRK08114 134 P-------LIGADIAKLIQP------NTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL---- 193 (395)
T ss_pred C-------CCHHHHHHhcCC------CceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc----
Confidence 3 367888888863 7899999999999999999 88888999897 499999999864221
Q ss_pred CcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh-hhcC-CCChHHHHHHHHhcCChhH
Q 011570 251 SFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM-SSFG-LVSSQTQHLIATMLSDDQF 327 (483)
Q Consensus 251 ~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~-~~~~-~~s~~~q~~~~~~l~~~~~ 327 (483)
.... ..+..+++.|.+|.++-+| +-.|.++. ++.+.+.+... ...+ ..++.....+..-++.
T Consensus 194 --~~pl---------~~GaDivv~S~tKyl~Ghsdv~~G~v~~-~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T--- 258 (395)
T PRK08114 194 --FKAL---------DFGIDISIQAGTKYLVGHSDAMIGTAVA-NARCWEQLRENSYLMGQMVDADTAYMTSRGLRT--- 258 (395)
T ss_pred --cCHH---------HcCCcEEEEcCcccccCCCcceeEEEEc-CHHHHHHHHHHHHhccCCCCHHHHHHHHcCCCc---
Confidence 1112 2255688999999875454 67787766 44443333322 2223 2444444433343433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 328 VEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 328 ~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
+.-+.++..++...+.+.|+++
T Consensus 259 ----L~lR~~~~~~na~~va~~L~~h 280 (395)
T PRK08114 259 ----LGVRLRQHEESSLKVAEWLAEH 280 (395)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHcC
Confidence 3344555677778888888876
No 267
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.72 E-value=3.1e-15 Score=153.14 Aligned_cols=172 Identities=17% Similarity=0.271 Sum_probs=129.8
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh---------cCCCCeEEEeCCCCcChHHHHhhhcCc
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL---------ADPGDAFLVPTPYYPGFDRDLRWRTGV 166 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l---------~~~gd~Vlv~~P~y~~~~~~~~~~~G~ 166 (483)
..+|++++|++++ .+++++++|+++++..++.++ ++|||+|+++.|+|..+...+... |+
T Consensus 65 ~~~fe~~lA~~~g----------~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~-G~ 133 (438)
T PRK15407 65 NDAFEKKLAEFLG----------VRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQN-GL 133 (438)
T ss_pred HHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHc-CC
Confidence 4789999999986 247999999999999988876 488999999999999998888875 99
Q ss_pred EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc-
Q 011570 167 QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV- 245 (483)
Q Consensus 167 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~- 245 (483)
+++.++++. .+|.+|++.+++++.+ ++++|+++++ +|... ++++|.++|+++|++||+|++++...
T Consensus 134 ~pv~vdvd~-~~~~id~~~le~~i~~------~tkaVi~~~~---~G~p~---dl~~I~~la~~~gi~vIeDaa~a~G~~ 200 (438)
T PRK15407 134 VPVFVDVEL-PTYNIDASLLEAAVSP------KTKAIMIAHT---LGNPF---DLAAVKAFCDKHNLWLIEDNCDALGST 200 (438)
T ss_pred EEEEEecCC-CcCCcCHHHHHHHcCc------CCeEEEEeCC---CCChh---hHHHHHHHHHHCCCEEEEECccchhhh
Confidence 999998864 3688999999998853 7899998875 45444 48889999999999999999997432
Q ss_pred cCCCCCcchHHHhhhhccccCCCeEEEEecC--ccccCCCCceEEEEEecChHHHHHHHHhhhc
Q 011570 246 FTKESSFVSIAEIIDQDIACNRNLIHIVYSL--SKDMGFPGFRVGIIYSYNDQVVSCARKMSSF 307 (483)
Q Consensus 246 ~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~--SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~ 307 (483)
+.+ ....+ + . .+.+.|| +|.+. .|= -|+++++++.+.+.++.+..+
T Consensus 201 ~~g-~~~G~---~---------g-d~~~fSf~~~k~~~-~ge-GG~l~t~d~~l~~~~~~~~~~ 248 (438)
T PRK15407 201 YDG-RMTGT---F---------G-DIATLSFYPAHHIT-MGE-GGAVFTNDPLLKKIIESFRDW 248 (438)
T ss_pred cCC-eeeec---c---------C-ceEEEeCCCCCCcc-ccC-ceEEEECCHHHHHHHHHHHHh
Confidence 222 11111 1 1 2345566 46564 332 499999888888776655443
No 268
>PRK02769 histidine decarboxylase; Provisional
Probab=99.72 E-value=6.6e-15 Score=147.68 Aligned_cols=296 Identities=9% Similarity=0.082 Sum_probs=195.9
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcE--EEeCChhHHHHHHHHHh--cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRI--VMSGGATGAHETVAFCL--ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i--~it~G~~~al~~~~~~l--~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v 171 (483)
..++.+.+.+++.+.+| .+++++ ++|+|+|+++...+.+. ..++++|++++-.|++....++.+ |.+...+
T Consensus 63 ~~~~e~~~~~~~a~l~g----~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~l-g~~~~~V 137 (380)
T PRK02769 63 SFDFERDVMNFFAELFK----IPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLL-RIKSRVI 137 (380)
T ss_pred hHHHHHHHHHHHHHHhC----CCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHc-CCCCcee
Confidence 35666666666666665 444554 88999999987665443 257889999999999998888876 8888888
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcC---cEEEEccccccCccCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKN---IHLVCDEIYAATVFTK 248 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~---~~iI~Deay~~~~~~~ 248 (483)
+.++ ++.+|+++|++++.+. +.++.+|+++.++|+||.+-+ +++|.++|+++| +++++|.+++.....-
T Consensus 138 ~~~~--~g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~ 209 (380)
T PRK02769 138 TSLP--NGEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPF 209 (380)
T ss_pred ccCC--CCcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeecc
Confidence 8764 4579999999999763 345889999999999999999 777788888998 7999999998743221
Q ss_pred CCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc---------CCCChHH---HH
Q 011570 249 ESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF---------GLVSSQT---QH 316 (483)
Q Consensus 249 ~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~---------~~~s~~~---q~ 316 (483)
... ....+. ......+..|.+|.++ ....+|.++..++.+. .+.....+ ++-+... ..
T Consensus 210 ~~~-~~~~d~-------~~~vDsis~s~HK~~~-~P~g~G~l~~r~~~~~-~~~~~~~yl~~~d~t~~GSR~g~~~l~lw 279 (380)
T PRK02769 210 VNN-PPPFSF-------ADGIDSIAISGHKFIG-SPMPCGIVLAKKKYVE-RISVDVDYIGSRDQTISGSRNGHTALLLW 279 (380)
T ss_pred cCc-cccCCc-------cCCCCEEEECCcccCC-CCCCcEEEEEehhhhh-hcccCccccCCCCCCccCCCCcHHHHHHH
Confidence 000 000111 1123445679999876 4566899988654332 22111111 1112222 22
Q ss_pred HHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeE
Q 011570 317 LIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLN 396 (483)
Q Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~ 396 (483)
++...+...+ .++..++..+..+++.+.|++.|++.......+.+.++.+. + ++ .+ |..
T Consensus 280 ~aL~~lg~~G-----~~~~~~~~~~la~~l~~~L~~~g~~~~~~p~~~~v~f~~~~---------~-~~----~~--~w~ 338 (380)
T PRK02769 280 AAIRSLGSKG-----LRQRVQHCLDMAQYAVDRLQANGIPAWRNPNSITVVFPCPS---------E-RI----WK--KWH 338 (380)
T ss_pred HHHHHHCHHH-----HHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCceEEEEcCCC---------H-HH----Hh--Cee
Confidence 2333333333 35556677788888999998888876654444566555442 0 11 22 444
Q ss_pred eeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhhccC
Q 011570 397 VSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVEAKV 442 (483)
Q Consensus 397 v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~~~~ 442 (483)
+.+- .+++|+++.. .+.+.++++++.|...+...++.+.
T Consensus 339 l~~~-------~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~~~~~~~ 378 (380)
T PRK02769 339 LATS-------GNQAHIITMPHHNKQQIDSLIDELIFDLKNPNKIDF 378 (380)
T ss_pred Eccc-------CCEEEEEECCCCCHHHHHHHHHHHHHHHhccccccc
Confidence 4322 2479999965 5888999999999988886665543
No 269
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.72 E-value=4.8e-15 Score=144.02 Aligned_cols=297 Identities=17% Similarity=0.176 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh---cC-CC-CeEEEeCCCCcChHHHHhhhcCcEE--E
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL---AD-PG-DAFLVPTPYYPGFDRDLRWRTGVQL--V 169 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l---~~-~g-d~Vlv~~P~y~~~~~~~~~~~G~~~--~ 169 (483)
.+.+.++|+.+.+.. + ..+.|+++|+++||+..++... .. ++ .+|+....+|++-.-..-.. +.+. .
T Consensus 83 ~~~~~~la~~L~~~s----~-~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~-t~~~ky~ 156 (404)
T COG4992 83 NEPQAELAEKLVELS----P-FADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSA-TGQPKYR 156 (404)
T ss_pred ChHHHHHHHHHHhhC----c-cccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeec-cCChhhc
Confidence 556777777776531 1 3789999999999999998664 22 22 36787777775422111111 1111 0
Q ss_pred --EeecCCC---CCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 170 --PVVCDSS---NDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 170 --~v~~~~~---~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
.-|+.+. -.|+ |+++++++|.+ ++.+|++...+--.|.+. +.+.++++.++|++||+++|.||+..+
T Consensus 157 ~~F~Pl~~g~~~vpfn-Di~al~~ai~~------~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG 229 (404)
T COG4992 157 KGFGPLLPGFRHVPFN-DIEALEAAIDE------DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTG 229 (404)
T ss_pred cCCCCCCCCceecCCC-CHHHHHHHhcc------CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccC
Confidence 0011110 0122 89999999975 788888876688888866 556699999999999999999999988
Q ss_pred CccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH---hhhcCCCChHHHHHHHH
Q 011570 244 TVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK---MSSFGLVSSQTQHLIAT 320 (483)
Q Consensus 244 ~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~---~~~~~~~s~~~q~~~~~ 320 (483)
+-.++ .+.....+.- .+| |+ ++.|.+| .|+.+|.+++. +.+...+.. -+.|+ .|+++.+++.+
T Consensus 230 ~GRTG--k~fA~e~~gV-----~PD--I~--tlaK~Lg-GG~PigA~la~-~~~~~~~~~G~HgSTfG-GNpLacAv~~a 295 (404)
T COG4992 230 LGRTG--KLFAYEHYGV-----EPD--IL--TLAKALG-GGFPIGAMLAT-EEIASAFTPGDHGSTFG-GNPLACAVALA 295 (404)
T ss_pred CCccc--hHHHHHHhCC-----CCC--EE--Eeecccc-CCccceeeEEc-hhhhhcCCCCcccCCCC-cCHHHHHHHHH
Confidence 54333 3333332211 222 32 7789999 99999999995 544444322 12233 67777776655
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC----CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeE
Q 011570 321 MLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV----GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLN 396 (483)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~ 396 (483)
.++--. -+...+..++.-++|.+.|+++ ++-.....-|+++-+++..... ..++...+. +.||+
T Consensus 296 ~l~~l~-----~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~~------a~~~~~~~~-~~gvL 363 (404)
T COG4992 296 VLEVLL-----EEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPYR------ARDIVRALR-EEGVL 363 (404)
T ss_pred HHHHHc-----chhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCccc------HHHHHHHHH-HCCeE
Confidence 553211 0122233344555666666654 2111223446888888875321 225666666 55999
Q ss_pred eeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 397 VSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 397 v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+.+. +++.+|+.... ++++++++++++|++++++..
T Consensus 364 ~~~a------~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~ 400 (404)
T COG4992 364 VLPA------GPNVIRFLPPLVITEEEIDEALDALERALAAAS 400 (404)
T ss_pred EecC------CCCeEEecCCccCCHHHHHHHHHHHHHHHHHhh
Confidence 8754 34589999987 599999999999999998764
No 270
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.72 E-value=2.3e-15 Score=165.24 Aligned_cols=310 Identities=14% Similarity=0.082 Sum_probs=192.7
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCC--cEEEeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHH---hhhcCcEEE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPD--RIVMSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDL---RWRTGVQLV 169 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~--~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~---~~~~G~~~~ 169 (483)
+.+.|+.+|++++ ++++ +|++|+|+|+++++++..+ +++||+|++..-.|+...... +. .|+++.
T Consensus 80 ~e~aR~~ia~~lg--------a~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~-~G~~v~ 150 (805)
T PLN02724 80 IESARQQVLEYFN--------APPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALE-KGAAAI 150 (805)
T ss_pred HHHHHHHHHHHhC--------CCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHH-cCCeEE
Confidence 5688888998887 3444 5899999999999999887 688999999877776655332 23 388998
Q ss_pred EeecCCCC------CcccCH--HHHHHHHHH----HHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc-----C
Q 011570 170 PVVCDSSN------DFKVTM--EALEAAYEK----AQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK-----N 232 (483)
Q Consensus 170 ~v~~~~~~------~~~~d~--~~l~~~i~~----~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~-----~ 232 (483)
.++++.+. ...+++ +.|++.++. ....+.++++|.++.-+|-||.+.|.+.+..+.+.++.+ +
T Consensus 151 ~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~ 230 (805)
T PLN02724 151 AVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGR 230 (805)
T ss_pred eccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcc
Confidence 88876211 112332 556655321 011123568999999999999999976554444433322 3
Q ss_pred cEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccC-CCCceEEEEEecChHHHHHHHHhhh-----
Q 011570 233 IHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG-FPGFRVGIIYSYNDQVVSCARKMSS----- 306 (483)
Q Consensus 233 ~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~li~~~~~l~~~~~~~~~----- 306 (483)
+++++|.+... + ....++..+ +..+++.|+.|.+| -.| +|++++.++ +.+.+.....
T Consensus 231 ~~v~vDaaQ~~---g--~~piDv~~~---------~~Dfl~~S~HK~~GgP~G--~G~L~vr~~-~~~~l~p~~~GGg~~ 293 (805)
T PLN02724 231 WMVLLDAAKGC---G--TSPPDLSRY---------PADFVVVSFYKIFGYPTG--LGALLVRRD-AAKLLKKKYFGGGTV 293 (805)
T ss_pred eEEEeehhhhc---C--CCCCChhhc---------CCCEEEEecceeccCCCC--ceEEEEehh-hhhhhcCCccCCCce
Confidence 68999999852 2 222344333 45577889999987 334 899998544 3322221100
Q ss_pred ---------------------cCCCChHHHHHHHHhcCChhHHHH-HHHHHHHHHHHHHHHHHHhhhcC-------Ccee
Q 011570 307 ---------------------FGLVSSQTQHLIATMLSDDQFVEK-FIAESAKRIAERHKAFTWGLSQV-------GIGC 357 (483)
Q Consensus 307 ---------------------~~~~s~~~q~~~~~~l~~~~~~~~-~~~~~~~~l~~~~~~l~~~L~~~-------gi~~ 357 (483)
.++.+.+...++.+++. ++.+ -.+...++..+..+++.+.|.++ ++.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~---~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~i 370 (805)
T PLN02724 294 AASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFK---LLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVL 370 (805)
T ss_pred EEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHH---HHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEE
Confidence 02223233333333332 2222 13445566677778888888766 3666
Q ss_pred ecCC--------ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC-----------------------
Q 011570 358 LKSN--------AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP----------------------- 406 (483)
Q Consensus 358 ~~~~--------~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~----------------------- 406 (483)
+.+. -+..+.+.+... ++..+. . .....|+.++||.++.|..|.+.
T Consensus 371 yg~~~~~~~~~~r~~ivsFnv~~~-~~~~v~-~-~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c 447 (805)
T PLN02724 371 YGNHTFKLEFHIQGPIVTFNLKRA-DGSWVG-H-REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVC 447 (805)
T ss_pred cCCCCCCCCcccccCEEEEEEEcC-CCCEeC-H-HHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCcc
Confidence 6432 123444455431 111111 1 23456677889999999877531
Q ss_pred ----------CCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 407 ----------NPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 407 ----------~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
..|++|+|++. .+.++++.+++.|++.+...
T Consensus 448 ~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~~~ 489 (805)
T PLN02724 448 WDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFVST 489 (805)
T ss_pred CchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhhcC
Confidence 12789999988 59999999999999966444
No 271
>PLN02880 tyrosine decarboxylase
Probab=99.71 E-value=1.7e-14 Score=149.43 Aligned_cols=328 Identities=13% Similarity=0.087 Sum_probs=207.5
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhCCCCCcC---CCcEEEeCChhHHHHHHHHHhcC-----------CCCeEEEeCCCCcC
Q 011570 90 FQDYHGLPEFRNAVAKFMGKVRGNRITFD---PDRIVMSGGATGAHETVAFCLAD-----------PGDAFLVPTPYYPG 155 (483)
Q Consensus 90 Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~---~~~i~it~G~~~al~~~~~~l~~-----------~gd~Vlv~~P~y~~ 155 (483)
|...++..++.+.+.+|+.+.+|.+-... ...-++|+|+++++..++.+..+ +.-.|++.+-+|.+
T Consensus 114 ~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~S 193 (490)
T PLN02880 114 WITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSA 193 (490)
T ss_pred cccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHH
Confidence 33344678999999999999987210000 12467889999988776644321 11256677888988
Q ss_pred hHHHHhhhcCcE---EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcC
Q 011570 156 FDRDLRWRTGVQ---LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKN 232 (483)
Q Consensus 156 ~~~~~~~~~G~~---~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~ 232 (483)
+..++..+ |.. ++.||.+..+++.+|++.|+++|++..++|..+-+|+.+-...+||.+-| +++|+++|+++|
T Consensus 194 v~Kaa~~l-Glg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~~~~~ 269 (490)
T PLN02880 194 LQKACQIA-GIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIAKSNG 269 (490)
T ss_pred HHHHHHHc-CCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHHHHcC
Confidence 98888886 874 78888876667899999999999887666666666677777889999999 888899999999
Q ss_pred cEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChH-HHHHHHHhhhcCC--
Q 011570 233 IHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQ-VVSCARKMSSFGL-- 309 (483)
Q Consensus 233 ~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~-l~~~~~~~~~~~~-- 309 (483)
+|+++|.+|+...... +. ......++ ....-+..+++|.++ ...-+|.++..+.. +...+.....+..
T Consensus 270 iwlHVDaA~gg~~~~~-~~---~~~~l~gi----e~aDSit~d~HKwl~-~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~ 340 (490)
T PLN02880 270 MWFHVDAAYAGSACIC-PE---YRHYIDGV----EEADSFNMNAHKWFL-TNFDCSLLWVKDRNALIQSLSTNPEFLKNK 340 (490)
T ss_pred CEEEEehhhHHHHHhC-HH---HHHHhcCc----hhcCEEEECchhhcC-CCccEEEEEEeCHHHHHHHHccCHHHhcCc
Confidence 9999999998754332 21 11121110 122345679999985 77889988885432 2222211111100
Q ss_pred -------CC-------------hHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEee
Q 011570 310 -------VS-------------SQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWM 368 (483)
Q Consensus 310 -------~s-------------~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~ 368 (483)
.+ .+...+....+... -+.+..+...+..+++.+.+++. ++++..+.....+.+
T Consensus 341 ~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~-----g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~F 415 (490)
T PLN02880 341 ASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVE-----NLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCF 415 (490)
T ss_pred cccccCCCChhccCcCCCCcccHHHHHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEE
Confidence 00 01111112222222 23344444446777788888776 788775544345666
Q ss_pred ecCch-hhccCh-HHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc--CCHHHHHHHHHHHHHHHHHhh
Q 011570 369 DLHHL-LKEQTY-EAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN--MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 369 ~l~~~-~~~~~~-~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~--~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+++.. ...... .-...+.++|.++..+.+.+... .+..++|+++.. +++++++.+++.|.+..++..
T Consensus 416 r~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~---~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~ 486 (490)
T PLN02880 416 RLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVL---SGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLL 486 (490)
T ss_pred EEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEE---CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 76531 111000 11124666666666666654332 245689999976 367999999999998877654
No 272
>PLN02590 probable tyrosine decarboxylase
Probab=99.71 E-value=4.4e-14 Score=146.47 Aligned_cols=331 Identities=13% Similarity=0.096 Sum_probs=210.0
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCc---CCCcEEEeCChhHHHHHHHHHhcC-----------CCCeEEEeCCCCc
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITF---DPDRIVMSGGATGAHETVAFCLAD-----------PGDAFLVPTPYYP 154 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~---~~~~i~it~G~~~al~~~~~~l~~-----------~gd~Vlv~~P~y~ 154 (483)
.|...++..++.+.+.+|+.+.+|.+-.. ....-++|+|+++++..++.+..+ +.-.|++.+-+|.
T Consensus 161 ~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~ 240 (539)
T PLN02590 161 TWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHS 240 (539)
T ss_pred CcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchH
Confidence 34445567899999999999998821100 013467789999888776655321 1225667788888
Q ss_pred ChHHHHhhhcCc---EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc
Q 011570 155 GFDRDLRWRTGV---QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK 231 (483)
Q Consensus 155 ~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~ 231 (483)
++..++..+ |. +++.||++..+++.+|++.|+++|++..+.+..+-+|+.+-..-+||.+=+ +.+|.++|++|
T Consensus 241 Sv~KAa~il-Glg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp---l~~Ia~i~~~~ 316 (539)
T PLN02590 241 SFRKACLIG-GIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP---LVPLGNIAKKY 316 (539)
T ss_pred HHHHHHHHc-CCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHh
Confidence 888888876 87 588899886667899999999999887666666666677777889999977 88889999999
Q ss_pred CcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecCh-HHHHHHHHhhhc---
Q 011570 232 NIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYND-QVVSCARKMSSF--- 307 (483)
Q Consensus 232 ~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~-~l~~~~~~~~~~--- 307 (483)
|+|+.+|.+|++..... +. ...+...+ ..-.-+...++|.+. ...-+|.++..+. .+.+.+.....+
T Consensus 317 g~WlHVDaA~GG~al~~-~~---~r~~~~Gi----e~ADSit~D~HK~l~-~p~~cg~llvr~~~~l~~a~~~~~~YL~~ 387 (539)
T PLN02590 317 GIWLHVDAAYAGNACIC-PE---YRKFIDGI----ENADSFNMNAHKWLF-ANQTCSPLWVKDRYSLIDALKTNPEYLEF 387 (539)
T ss_pred CCeEEEecchhhhhhcC-hh---hHHHhcCC----ccCCEEEECchhhcC-cCcCEEEEEecCHHHHHHHhhcCHHHhCC
Confidence 99999999998864333 22 22222211 111223458999885 7788998888554 233322110000
Q ss_pred ---------------CCCCh----HHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEe
Q 011570 308 ---------------GLVSS----QTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLW 367 (483)
Q Consensus 308 ---------------~~~s~----~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~ 367 (483)
...+. +...++...+... -+++..++..+..+++.+.+++. ++++..+..-..+.
T Consensus 388 ~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~-----G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVc 462 (539)
T PLN02590 388 KVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSE-----NLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVC 462 (539)
T ss_pred cccccccCCCccccCCCCCCchHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEE
Confidence 00111 1111222222222 24555556667778888888776 78876554434555
Q ss_pred eecCch-hhccC-hHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc--CCHHHHHHHHHHHHHHHHHhhhc
Q 011570 368 MDLHHL-LKEQT-YEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN--MDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 368 ~~l~~~-~~~~~-~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~--~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
+++... ..... -.....+.+++.+...+.+.+.. . .+..++|+++++ +++++++.+++.|.+...+..+.
T Consensus 463 Fr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~-~--~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~~~ 536 (539)
T PLN02590 463 FRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTA-L--SGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTRN 536 (539)
T ss_pred EEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeE-E--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhccc
Confidence 665421 11110 01123566666655445555433 2 234589999976 48899999999999887666543
No 273
>PLN02271 serine hydroxymethyltransferase
Probab=99.70 E-value=3.1e-14 Score=144.82 Aligned_cols=309 Identities=14% Similarity=0.089 Sum_probs=194.5
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhCCCCCcCC----CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH-----
Q 011570 90 FQDYHGLPEFRNAVAKFMGKVRGNRITFDP----DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----- 160 (483)
Q Consensus 90 Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~----~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----- 160 (483)
|+......++.....+...+.++ .+. .||-.. +++.|+..++.+|++|||+|+..+..|+++....
T Consensus 186 y~G~~~iD~iE~la~era~~lF~----~~~~~~gaNVQp~-SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~ 260 (586)
T PLN02271 186 YTGNQYIDQIERLCCERALAAFG----LDSEKWGVNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPG 260 (586)
T ss_pred CCCChhHHHHHHHHHHHHHHHhC----Ccccccccceeec-cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhccccccc
Confidence 33333345565555566666665 344 466666 5566778888999999999999988877665432
Q ss_pred ----hhhcCcE--EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcE
Q 011570 161 ----RWRTGVQ--LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIH 234 (483)
Q Consensus 161 ----~~~~G~~--~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~ 234 (483)
.. .|.. ++++++++ .+..+|.+++++.+.. .++|+|++..-.|| ..++ ++++.++|+++|++
T Consensus 261 g~~vs~-sG~~~~~vpY~~d~-~~g~IDyd~lek~a~~-----~rPKLII~g~Sayp--r~~D---~~~i~eIAdevGA~ 328 (586)
T PLN02271 261 GKKVSG-ASIFFESLPYKVNP-QTGYIDYDKLEEKALD-----FRPKILICGGSSYP--REWD---YARFRQIADKCGAV 328 (586)
T ss_pred cccccc-ccceEEEEEccccc-ccCccCHHHHHHHhhh-----cCCeEEEECchhcc--CcCC---HHHHHHHHHHcCCE
Confidence 11 2544 44444543 2457999999985544 38998888776787 5566 67778888899999
Q ss_pred EEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecCh-------------------
Q 011570 235 LVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYND------------------- 295 (483)
Q Consensus 235 iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~------------------- 295 (483)
+++|.++....... ..+.+.. ....++.+|.+|++ .|-|-|.++..++
T Consensus 329 LmvD~AH~aGLIa~-g~~~sP~----------~~aDvvt~TTHKtL--rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~ 395 (586)
T PLN02271 329 LMCDMAHISGLVAA-KECVNPF----------DYCDIVTSTTHKSL--RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHY 395 (586)
T ss_pred EEEECccccccccc-CcCCCCC----------cCCcEEEeCCcccC--CCCCceEEEecccccccccCCccccccccccH
Confidence 99999997554443 2222211 12447889999987 6777798887432
Q ss_pred HHHHHHHHhhhcCC-CCh--HHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC-ceEEEeeecC
Q 011570 296 QVVSCARKMSSFGL-VSS--QTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN-AGLFLWMDLH 371 (483)
Q Consensus 296 ~l~~~~~~~~~~~~-~s~--~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~-~g~f~~~~l~ 371 (483)
++.+.+.....++. .++ ...++++..+..-.. .++ +...+++.++.+.|.+.|.+.|+++.... .+-.+++++.
T Consensus 396 d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~-~ef-k~Ya~QVv~NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~ 473 (586)
T PLN02271 396 DFEEKINFAVFPSLQGGPHNNHIAALAIALKQVAT-PEY-KAYMQQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLT 473 (586)
T ss_pred HHHHHhhcccCCccccChhHHHHHHHHHHHHHHhC-hHH-HHHHHHHHHHHHHHHHHHHHCCCeEeeCCCCcceeeecCc
Confidence 23333333222221 121 122333333332110 122 45566778899999999999999876422 2446788885
Q ss_pred chhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC---CCCEEEEEecc-----CCHHHHHHHHHHHHHHHHH
Q 011570 372 HLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP---NPGWFRVCFAN-----MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 372 ~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~---~~~~iRis~~~-----~~~e~l~~~l~~L~~~l~~ 436 (483)
...- ....++++|++.||.+..-..++.. .++.+||+... ..++++++..+-|.++++-
T Consensus 474 ~~g~------~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~~ 540 (586)
T PLN02271 474 TLGL------TGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQI 540 (586)
T ss_pred ccCC------CHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHhh
Confidence 4210 1245777888999988554433321 24569998743 3568888888888888773
No 274
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.70 E-value=9e-15 Score=159.91 Aligned_cols=319 Identities=14% Similarity=0.113 Sum_probs=206.9
Q ss_pred cccccCCCC---CCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChh----HHHHHHHHHhcCC-CC----eEEEeCCC
Q 011570 85 KGIAIFQDY---HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGAT----GAHETVAFCLADP-GD----AFLVPTPY 152 (483)
Q Consensus 85 ~~~~~Y~~~---~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~----~al~~~~~~l~~~-gd----~Vlv~~P~ 152 (483)
..++.|.|. +|+.++.+.+.+++.+..| .++|.++.+++ +++.+++.++.++ || +|+++...
T Consensus 552 ~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g------~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~a 625 (993)
T PLN02414 552 ANIHPFAPVDQAQGYQEMFEDLGDLLCEITG------FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSA 625 (993)
T ss_pred hhcCCCCCHHHHHHHHHHHHHHHHHHHHHhC------CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCc
Confidence 344555443 3555554444455544443 38999999999 8999999999866 88 89999999
Q ss_pred CcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcC
Q 011570 153 YPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKN 232 (483)
Q Consensus 153 y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~ 232 (483)
|+.....+... |++++.++.++++ .+|+++|++++.+. ..++++|++++|||-+|...+ +++|+++|+++|
T Consensus 626 H~sn~a~a~~~-G~~vv~v~~d~~G--~vDle~L~~~i~~~---~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~G 696 (993)
T PLN02414 626 HGTNPASAAMC-GMKIVVVGTDAKG--NINIEELRKAAEAH---KDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNG 696 (993)
T ss_pred CccCHHHHHHC-CCEEEEeccCCCC--CcCHHHHHHHHhcc---CCCeEEEEEECCCccccccch---HHHHHHHHHHcC
Confidence 99888888775 9999999987543 79999999999741 126899999999999999877 888999999999
Q ss_pred cEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccC----CCCceEEEEEecChHHHHHHHHh----
Q 011570 233 IHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG----FPGFRVGIIYSYNDQVVSCARKM---- 304 (483)
Q Consensus 233 ~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g----~~GlRiG~li~~~~~l~~~~~~~---- 304 (483)
+++++|.+...-...- .... ..+..+++.|.+|+|+ ..|--+|++.+. +.+...+...
T Consensus 697 alv~vDgAq~~a~~~l----~~p~---------~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~-~~L~p~lPg~~v~~ 762 (993)
T PLN02414 697 GQVYMDGANMNAQVGL----TSPG---------FIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVP 762 (993)
T ss_pred CEEEEEecCHHhccCc----CCcc---------ccCCCEEEecCCccCCcCcccCCCCeeeEEEc-hhhcccCCCCcccc
Confidence 9999999984321111 1111 2355677889999765 334558998874 3333222100
Q ss_pred --------h--hcCCCCh--HHHH----HHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEE--
Q 011570 305 --------S--SFGLVSS--QTQH----LIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLF-- 365 (483)
Q Consensus 305 --------~--~~~~~s~--~~q~----~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f-- 365 (483)
. ..+.++. ..|. ++..++...+ .+-+++..++...+.+++.+.|.+. ++.+..+.+.+|
T Consensus 763 ~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG--~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hE 840 (993)
T PLN02414 763 TGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMG--SEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHE 840 (993)
T ss_pred CCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHC--HhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeee
Confidence 0 0122221 1111 1122222211 2235555666777888999988763 444443333211
Q ss_pred EeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 366 LWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
+.++++...+... ....+++++|+ ++||..-- ..| +..+++|++... .+.+++++++++|..+..+..+
T Consensus 841 fv~~~~~l~~~~g-~~~~di~krL~-d~Gihapt-~~~--pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 841 FIIDLRPFKNTAG-IEPEDVAKRLM-DYGFHAPT-MSW--PVPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred EEEeccccccccC-CCHHHHHHHHH-HcCcEEee-ecc--ccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 1134442111111 11347899998 67987433 224 247789999976 5999999999999988877654
No 275
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.69 E-value=9.9e-14 Score=137.17 Aligned_cols=218 Identities=22% Similarity=0.240 Sum_probs=153.1
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh---cCcEEEEee
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR---TGVQLVPVV 172 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~---~G~~~~~v~ 172 (483)
...|.++++.+-+ .++.+.++++..||..++.+|+++||+|+++...|++....+... .|+++..++
T Consensus 65 ~~~lE~~~a~LEg----------~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d 134 (396)
T COG0626 65 RDALEEALAELEG----------GEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVD 134 (396)
T ss_pred HHHHHHHHHHhhC----------CCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEEC
Confidence 4567777776642 578899999999999999999999999999999998876654432 488887766
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
.. +.+.+++++.+ +++|+|++.+|+|||-.+.+ +.+|+++|+++|+++|+|+.|+..++..
T Consensus 135 ~~-------~~~~~~~~~~~-----~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q~---- 195 (396)
T COG0626 135 PG-------DDEALEAAIKE-----PNTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQR---- 195 (396)
T ss_pred CC-------ChHHHHHHhcc-----cCceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCcccccccC----
Confidence 32 44556666542 37999999999999988888 8899999999999999999997544332
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCCC-CceEEEEEecChHHHHHHH-Hhh-hcC-CCChHHHHHHHHhcCChhHH
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGFP-GFRVGIIYSYNDQVVSCAR-KMS-SFG-LVSSQTQHLIATMLSDDQFV 328 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~-GlRiG~li~~~~~l~~~~~-~~~-~~~-~~s~~~q~~~~~~l~~~~~~ 328 (483)
+ + ..+..|++.|.+|.+|-- -+=.|.++++++.+.+.+. ... ..+ .+++.....+.+-++.
T Consensus 196 -P---L-------~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkT---- 260 (396)
T COG0626 196 -P---L-------ELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLRT---- 260 (396)
T ss_pred -h---h-------hcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccch----
Confidence 1 1 125568899999998622 2445767766667766642 222 233 3455544444444433
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcC-Cc-eeecC
Q 011570 329 EKFIAESAKRIAERHKAFTWGLSQV-GI-GCLKS 360 (483)
Q Consensus 329 ~~~~~~~~~~l~~~~~~l~~~L~~~-gi-~~~~~ 360 (483)
+.-+.++..++...+.+.|+++ .+ +++.|
T Consensus 261 ---L~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yP 291 (396)
T COG0626 261 ---LALRMERHNENALKIAEFLADHPKVKKVYYP 291 (396)
T ss_pred ---HHHHHHHHHHHHHHHHHHHhcCCCeEEEECC
Confidence 3445556677788888888886 34 34444
No 276
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.69 E-value=1.5e-14 Score=131.11 Aligned_cols=303 Identities=17% Similarity=0.226 Sum_probs=208.6
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS 175 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~ 175 (483)
+.++.+.+++|++ -|.+-+|+|+.++-+.++.+++++||.|++...++...+-++... |.++..+|-..
T Consensus 63 I~~F~~dlaeFlg----------~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAEra-gl~v~eVp~tg 131 (382)
T COG1103 63 IKDFLEDLAEFLG----------MDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERA-GLNVAEVPNTG 131 (382)
T ss_pred HHHHHHHHHHHhC----------CceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhc-CCeEEecCCCC
Confidence 5778888999986 578999999999999999999999999999999876666667765 99999999766
Q ss_pred CCCcccCHHHHHHHHHHHHhcC-CceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcch
Q 011570 176 SNDFKVTMEALEAAYEKAQESN-IRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVS 254 (483)
Q Consensus 176 ~~~~~~d~~~l~~~i~~~~~~~-~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s 254 (483)
...|.++++...+.|.+...++ ..+.+.++++|..--|.+.+ .++++++|+++|++++...+|.. + .-..|
T Consensus 132 ~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D---akkva~ic~e~gvPlllN~AYt~---G--rmpvs 203 (382)
T COG1103 132 YPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD---AKKVAKICREYGVPLLLNCAYTV---G--RMPVS 203 (382)
T ss_pred CCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh---hHHHHHHHHHcCCceEeecceee---c--ccccc
Confidence 6679999999999998877765 45778899999877888766 88999999999999999999963 2 22234
Q ss_pred HHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh-h-c-------CCCChHHHHHHHHhcCCh
Q 011570 255 IAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS-S-F-------GLVSSQTQHLIATMLSDD 325 (483)
Q Consensus 255 ~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~-~-~-------~~~s~~~q~~~~~~l~~~ 325 (483)
..+. ...++++|-+|+++ +.-.+|.+.. ..+..+..-+.+ . + ..++.... -+..++.+-
T Consensus 204 ~ke~---------g~DFiVgSGHKsmA-As~PiGvl~~-~eE~ae~V~r~Sg~~~~~KEvellGCT~rGa-pivTlmASf 271 (382)
T COG1103 204 GKEI---------GADFIVGSGHKSMA-ASAPIGVLAM-SEEWAEIVLRRSGRAFPKKEVELLGCTVRGA-PIVTLMASF 271 (382)
T ss_pred cccc---------CCCEEEecCccchh-ccCCeeEEee-hhHHHHHHHhhcccccccceeeeecccccCc-hHHHHHhcC
Confidence 3333 45688999999997 6668999988 455555432222 1 1 11222111 222333333
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcCC-ceee--cCCceEEEeeecCchhhc--cChHHHHHHHHHHHHhcCeE-eeC
Q 011570 326 QFVEKFIAESAKRIAERHKAFTWGLSQVG-IGCL--KSNAGLFLWMDLHHLLKE--QTYEAEMALWRVIINEVKLN-VSP 399 (483)
Q Consensus 326 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~~--~~~~g~f~~~~l~~~~~~--~~~~~~~~~~~~Ll~~~gV~-v~p 399 (483)
.++.+..++.-+. -+...++...|+++| +.-. .|...-.+.+..|.+..- +......-+++.|- +.||. |.|
T Consensus 272 P~V~eRVkrWdeE-v~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK-~RgI~GI~~ 349 (382)
T COG1103 272 PHVVERVKRWDEE-VEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELK-KRGIHGIQP 349 (382)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHH-hcCcccccc
Confidence 3433333332222 344577888888874 5432 344444555665543110 00000011334444 55774 666
Q ss_pred CCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 400 GSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 400 g~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
|. ..++.+|+=..+.|+++..++++++++++.
T Consensus 350 G~------Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 350 GQ------TKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred Cc------eeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 64 468999995589999999999999998875
No 277
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.69 E-value=1.3e-14 Score=139.02 Aligned_cols=350 Identities=15% Similarity=0.138 Sum_probs=221.4
Q ss_pred CcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeC
Q 011570 47 GVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSG 126 (483)
Q Consensus 47 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~ 126 (483)
..|+|-..||...+...+..-..... .....++....|+...-..++.+...+...+.+| .+-.||-..+
T Consensus 27 ~~ieLIASEN~~S~aV~~A~gS~ltn------KYAEGyPgkRyYgGce~VD~vE~laierak~LFg----a~~anVQPhS 96 (413)
T COG0112 27 EHIELIASENFTSPAVMEAQGSDLTN------KYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFG----AEYANVQPHS 96 (413)
T ss_pred hceeeeeccccCCHHHHHHHhhhhhh------ccccCCCCccccCCCeeHHHHHHHHHHHHHHHhC----CCccccCCCC
Confidence 44788888887665443332211100 0011123334455555456666666677777877 5667888888
Q ss_pred ChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh--cC--cEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 127 GATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR--TG--VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 127 G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~G--~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
|++ |...++.+|++|||+|+-.+-.++++...-... .| .++++++++.+ +..+|.|++++.+.++ ++|+
T Consensus 97 Gs~-AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~e-t~~IDyD~~~k~a~e~-----kPK~ 169 (413)
T COG0112 97 GSQ-ANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPE-TGLIDYDEVEKLAKEV-----KPKL 169 (413)
T ss_pred chH-HHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccc-cCccCHHHHHHHHHHh-----CCCE
Confidence 865 566777899999999999888777665432110 12 46677777743 5689999999998875 8898
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
|+.-.-..| ..++ .+++.++|.+.|.++++|-+|-.....+ ..+++... ...++.+|.+|+|
T Consensus 170 ii~G~SaY~--r~id---~~~~reIad~VGA~L~~DmAHiaGLVA~-G~~p~P~~----------~AdvVTtTTHKTl-- 231 (413)
T COG0112 170 IIAGGSAYS--RPID---FKRFREIADEVGAYLMVDMAHVAGLIAG-GVHPNPLP----------HADVVTTTTHKTL-- 231 (413)
T ss_pred EEECccccc--cccC---HHHHHHHHHHhCceEEehHHHHHHHHhc-ccCCCCCC----------ccceEeCCcccCC--
Confidence 776422222 1233 7788888889999999999995433333 33333221 2447789999997
Q ss_pred CCceEEEEEecChHHHHHHHHhhhcCCCChHHHH-HHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQH-LIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~-~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
+|-|-|.+.+..+++.+.+++...++..+.+-.. +++.++.-.+.++.-.++..+++.++.+.|.+.|.+.|+++....
T Consensus 232 rGPrGG~Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGg 311 (413)
T COG0112 232 RGPRGGIILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGG 311 (413)
T ss_pred CCCCceEEEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCC
Confidence 8999999999766787777665444433333222 222222211111112355566678888999999999999887532
Q ss_pred c-eEEEeeecCc-hhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC-C---CCCEEEEEecc-----CCHHHHHHHHHHH
Q 011570 362 A-GLFLWMDLHH-LLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC-P---NPGWFRVCFAN-----MDDRTMEIALSRI 430 (483)
Q Consensus 362 ~-g~f~~~~l~~-~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~-~---~~~~iRis~~~-----~~~e~l~~~l~~L 430 (483)
. +-.+.+++.. ... ...++.+|++.||.+.--..... . .+..|||+... ..++++++..+-|
T Consensus 312 TdnHl~lVDl~~~~~~-------Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I 384 (413)
T COG0112 312 TDNHLVLVDLRSKGLT-------GKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLI 384 (413)
T ss_pred ccceEEEEEcccCCCC-------HHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHH
Confidence 2 2345577762 112 24466778889998854332221 1 23459998743 3678899999999
Q ss_pred HHHHHHhh
Q 011570 431 TSFMLKNV 438 (483)
Q Consensus 431 ~~~l~~~~ 438 (483)
.+++....
T Consensus 385 ~~vl~~~~ 392 (413)
T COG0112 385 ADVLDGLK 392 (413)
T ss_pred HHHHhccc
Confidence 88887654
No 278
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.68 E-value=1.9e-14 Score=141.41 Aligned_cols=173 Identities=20% Similarity=0.329 Sum_probs=135.2
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCD 174 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~ 174 (483)
..++.+++|+|++ ....+.++++|.|+.+++.+| ++|||.|+++.-+|....+.+... |++++.+++|
T Consensus 36 v~~FE~~~ae~~G----------~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i~~~-Ga~PVFvDid 104 (374)
T COG0399 36 VRRFEQAFAEYLG----------VKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAVLLV-GAKPVFVDID 104 (374)
T ss_pred HHHHHHHHHHHhC----------CCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHHHHc-CCeEEEEecC
Confidence 5789999999976 568888889999999999866 599999999999999988888875 9999999998
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc-cCCCCCcc
Q 011570 175 SSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV-FTKESSFV 253 (483)
Q Consensus 175 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~-~~~~~~~~ 253 (483)
.+ .|.+|++.+|++|.+ ++|+|+..+- -|...+ +++|.++|++||++||+|.+++... |.+ +...
T Consensus 105 ~~-T~nid~~~ie~aIt~------~tKAIipVhl---~G~~~d---m~~i~~la~~~~l~vIEDaAqa~Ga~y~g-k~vG 170 (374)
T COG0399 105 PD-TLNIDPDLIEAAITP------RTKAIIPVHL---AGQPCD---MDAIMALAKRHGLPVIEDAAQAHGATYKG-KKVG 170 (374)
T ss_pred Cc-ccCCCHHHHHHHccc------CCeEEEEehh---ccCCCC---HHHHHHHHHHcCCeEEEEcchhccCeecC-cccc
Confidence 64 689999999999985 6999986643 355455 8888999999999999999987432 222 2211
Q ss_pred hHHHhhhhccccCCCeEEEEecC--ccccCCCCceEEEEEecChHHHHHHHHhhhcC
Q 011570 254 SIAEIIDQDIACNRNLIHIVYSL--SKDMGFPGFRVGIIYSYNDQVVSCARKMSSFG 308 (483)
Q Consensus 254 s~~~l~~~~~~~~~~~vi~~~S~--SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~ 308 (483)
+ + + .+.+.|| +|.++ .| --|.++++++++.+..+.++..+
T Consensus 171 t---~---------G-d~~~fSF~~~K~it-tg-EGGav~tnd~ela~k~~~lr~hG 212 (374)
T COG0399 171 S---F---------G-DIGAFSFHATKNLT-TG-EGGAVVTNDEELAEKARSLRNHG 212 (374)
T ss_pred c---c---------c-ceEEEEecCCCCcc-cc-CceEEEeCCHHHHHHHHHHHHhC
Confidence 1 1 1 2334566 78887 44 56899998888888877655443
No 279
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.68 E-value=9.3e-15 Score=138.96 Aligned_cols=298 Identities=13% Similarity=0.119 Sum_probs=200.7
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCcEEEEeec
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~ 173 (483)
..+|.+.+|++..+ +.-++.+++--+....+..|. -||-.|+...-.+.+....++.. ++.-.-+..
T Consensus 218 hv~LE~eLA~LHqK----------~aALlFsSCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrns-~v~K~IFrH 286 (570)
T KOG1360|consen 218 HVRLEAELADLHQK----------EAALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNS-RVPKHIFRH 286 (570)
T ss_pred hhhHHHHHHHHhcC----------cceeeeeeeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhc-CCcceeecc
Confidence 56888899988752 233333333333333333332 37877887777887777777764 655444432
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcc
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFV 253 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~ 253 (483)
-|++.|++.+++... ..+|.|-+.+.+..+|.+.| +++|++++++||.+-++||+++-..|+. .. .
T Consensus 287 -------ND~~hL~~lL~~~~~--svPKivAFEtVhSM~Gavcp---leelcDvah~yGAiTFlDEVHAVGlYG~-rG-a 352 (570)
T KOG1360|consen 287 -------NDLDHLEQLLQSSPK--SVPKIVAFETVHSMDGAVCP---LEELCDVAHKYGAITFLDEVHAVGLYGP-RG-A 352 (570)
T ss_pred -------CCHHHHHHHHHhCCC--CCCceEEEeeeeccCCCcCC---HHHHHHHHHHhCceeeeehhhhhccccC-CC-C
Confidence 378999999986433 25788888999999999999 8888999999999999999998777765 21 1
Q ss_pred hHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh-c---CCCChHHHHHH---HHhcCChh
Q 011570 254 SIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS-F---GLVSSQTQHLI---ATMLSDDQ 326 (483)
Q Consensus 254 s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~-~---~~~s~~~q~~~---~~~l~~~~ 326 (483)
.+.+-.. ......|+-+++.|+||+-| ||+.+ ...+.+.++.+.. | ...++.....+ ...|...+
T Consensus 353 GvgerdG----vm~kvDiIsGTLgKafGcVG---GYIAa-t~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~e 424 (570)
T KOG1360|consen 353 GVGERDG----VMHKVDIISGTLGKAFGCVG---GYIAA-TRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEE 424 (570)
T ss_pred CccccCC----cchhhhhcccchhhhccccc---ceehh-hhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhh
Confidence 2221110 02234577899999999988 99998 4567777665442 2 11222222212 12232221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC
Q 011570 327 FVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP 406 (483)
Q Consensus 327 ~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~ 406 (483)
....+++.+++..++++.|.+.|+++.+.... .+-+.+.+... ..+.+..|+.++||+|-.-.+....
T Consensus 425 -----g~~lR~~hqrnv~~~kq~l~~~GiPVi~~pSH-IiPv~vgda~l------~~~~sd~Li~~h~iYvQaINyPTV~ 492 (570)
T KOG1360|consen 425 -----GRVLRRQHQRNVKYVKQLLMELGIPVIPNPSH-IIPVRVGDAAL------AKQASDILISKHNIYVQAINYPTVA 492 (570)
T ss_pred -----hHHHHHHHHHHHHHHHHHHHHcCCcccCCCcc-eeeeeccCHHH------HHHHHHHHHHhcCeEEEeccCCccc
Confidence 23445566777889999999999999887764 66666654322 2267888999999999766544432
Q ss_pred -CCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 407 -NPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 407 -~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+...+||+..- .+++-++.+++.|..++++..
T Consensus 493 rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~ 526 (570)
T KOG1360|consen 493 RGTERLRIAPTPHHTPQMMNILVNALLDVWNEVG 526 (570)
T ss_pred ccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 34569998853 488889999999999998865
No 280
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.68 E-value=6.9e-14 Score=142.63 Aligned_cols=156 Identities=21% Similarity=0.305 Sum_probs=113.5
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH----HHhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR----DLRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~----~~~~~~G~~~~~v 171 (483)
...+++.+|++.+ ....|++++|. .++..++.+++++||+|+++...|++... .+... |++++.+
T Consensus 71 ~~~le~~la~l~g---------~~~~v~fsSG~-~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~-Gi~v~~v 139 (437)
T PRK05613 71 VEALENRIASLEG---------GVHAVAFASGQ-AAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRL-GIEVTFV 139 (437)
T ss_pred HHHHHHHHHHHhC---------CCeEEEeCCHH-HHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhc-CeEEEEE
Confidence 4566777777655 23455555555 78888888889999999999999987643 33444 9999888
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+ +. .|++.+++++++ ++++|++.+|.||+|.+.+ +++|.++|+++|+++|+|.+++....
T Consensus 140 d-~~-----~d~e~l~~~l~~------~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~----- 199 (437)
T PRK05613 140 E-NP-----DDPESWQAAVQP------NTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL----- 199 (437)
T ss_pred C-CC-----CCHHHHHHhCCc------cCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc-----
Confidence 7 22 278999998864 7899999999999999999 88888889999999999999863211
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEe
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYS 292 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~ 292 (483)
..+. .+ ...+++.|++|.++-.|--+|-+++
T Consensus 200 ~~p~-~~---------GaDivv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 200 VRPL-EL---------GADVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred cChH-Hh---------CCCEEEeeccceecCCCcceeEEEE
Confidence 1111 12 3457888999998755544454333
No 281
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.67 E-value=7.6e-14 Score=143.08 Aligned_cols=305 Identities=15% Similarity=0.071 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc------C-CC-CeEEEeCCCCcChHHHHhhhcCc--
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA------D-PG-DAFLVPTPYYPGFDRDLRWRTGV-- 166 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~------~-~g-d~Vlv~~P~y~~~~~~~~~~~G~-- 166 (483)
.+.+..+|+.+.+... -..+.+++++++++++..++.... . +| .+|+...-+|++.........+-
T Consensus 84 ~~~~~~la~~l~~~~p----~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~ 159 (423)
T PRK05964 84 HEPAERLAQRLVALTP----GGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGG 159 (423)
T ss_pred CHHHHHHHHHHHHhCC----CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCcc
Confidence 3455666666665421 124689999999999999887642 1 23 57888888887754332221111
Q ss_pred ----------EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeC-CCCCCcCCC-CHHHHHHHHHHHhhcCcE
Q 011570 167 ----------QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITN-PSNPLGTFL-DRETLKDIVSFINEKNIH 234 (483)
Q Consensus 167 ----------~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~-P~NPtG~~~-~~~~l~~i~~~a~~~~~~ 234 (483)
.+..++.+..+....+++.+++.+.+. +.++.+|++.. .++..|..+ +.+.+++|.++|++||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~---~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~l 236 (423)
T PRK05964 160 MHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKH---AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVL 236 (423)
T ss_pred ccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC---CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 112222221110112267777777532 23566666653 367778766 899999999999999999
Q ss_pred EEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh---h-----h
Q 011570 235 LVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM---S-----S 306 (483)
Q Consensus 235 iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~---~-----~ 306 (483)
+|+||++.++...+ .. ... .... -...+ -++||.++.+++++|++++ ++++.+.+... . .
T Consensus 237 lI~DEv~tg~gr~G-~~-~a~-~~~~------v~pDi--~~~~K~l~gG~~p~~av~~-~~~i~~~~~~~~~~~~~~~~~ 304 (423)
T PRK05964 237 LIFDEIATGFGRTG-TL-FAC-EQAG------VSPDI--MCLSKGLTGGYLPLAATLC-TAEIFEAFYSDDRAKAFMHSP 304 (423)
T ss_pred EEEechhhCCCcCc-ch-hHH-HhcC------CCCCe--eeeehhhhcCcccceEEEE-cHHHHHhhhcCCcccccccCC
Confidence 99999997743332 21 111 1111 11122 3789999733389999888 56666655321 0 1
Q ss_pred cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceee--cCCceEEEeeecCchhhccChHHHH
Q 011570 307 FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCL--KSNAGLFLWMDLHHLLKEQTYEAEM 383 (483)
Q Consensus 307 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~--~~~~g~f~~~~l~~~~~~~~~~~~~ 383 (483)
.+..++++..++.+.++--.. . ...+++.+.-+++.+.|+++ +.+.. ...-|+++.+.+..... . ....
T Consensus 305 T~~~np~~~aaa~a~l~~l~~-~----~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~--~-~~~~ 376 (423)
T PRK05964 305 SYTANPLACAAANASLDLFED-E----PVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVL--E-RDGP 376 (423)
T ss_pred CCCcCHHHHHHHHHHHHHHHh-c----CHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcc--h-hHHH
Confidence 122466666665555541110 1 11222333334444444433 22211 12234566677753210 0 1123
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 384 ALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 384 ~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
.+...|+ ++||.+.+.. +.+|++... .+++++++++++|++++++
T Consensus 377 ~l~~~l~-~~Gv~v~~~~-------~~lR~~p~l~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 377 ALRAFAL-ERGVLLRPLG-------NTIYLMPPYIITAEELDRITDAIVEVADE 422 (423)
T ss_pred HHHHHHH-HCCeEEEecC-------CEEEEeCCcccCHHHHHHHHHHHHHHHhh
Confidence 5666666 4699997631 369999875 5999999999999998865
No 282
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.67 E-value=1.1e-13 Score=138.69 Aligned_cols=206 Identities=14% Similarity=0.179 Sum_probs=136.6
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH----HHhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR----DLRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~----~~~~~~G~~~~~v 171 (483)
..+|.+.++++.+ .+..+++++++.||.+++.+++++||+|+++.+.|+.... .+.. .|++++.+
T Consensus 66 ~~~lE~~la~leg----------~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~-~Gi~v~fv 134 (384)
T PRK06434 66 VQAFEEKYAVLEN----------AEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKT-LGIHVDYI 134 (384)
T ss_pred HHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHh-cCcEEEEE
Confidence 4567777777754 3567888888899999999999999999999887766553 3444 49999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+.++.+.+.++. .++++|++..|+|||+.+.+ +++|+++|++++ +++|.+++.. +.. .
T Consensus 135 d~~~~~~~~l~~--------------~~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~-~~~-~- 192 (384)
T PRK06434 135 DTDRLNSLDFDP--------------SNYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASP-YNQ-N- 192 (384)
T ss_pred CCCChhheeecC--------------CCeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCc-ccC-C-
Confidence 876433333221 26899999999999999877 888888888988 4569997532 222 1
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHhh-hcCCC-ChHHHHHHHHhcCChhHH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKMS-SFGLV-SSQTQHLIATMLSDDQFV 328 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~~-~~~~~-s~~~q~~~~~~l~~~~~~ 328 (483)
++ . ....+++.|.+|.++-+| .=.|.+++.++.+.+.+.... ..+.. ++.....+..-|+.
T Consensus 193 --pl-~---------~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~t---- 256 (384)
T PRK06434 193 --PL-D---------LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKT---- 256 (384)
T ss_pred --ch-h---------cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCc----
Confidence 11 1 134577889999996434 446777776666655554332 33332 33322222222332
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 329 EKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 329 ~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
+..+.++..++...+.+.|+.+
T Consensus 257 ---L~~R~~r~~~~a~~~a~~L~~~ 278 (384)
T PRK06434 257 ---LGLRMEKHNKNGMELARFLRDS 278 (384)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHcC
Confidence 3344444566667778888876
No 283
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.67 E-value=1.5e-13 Score=137.62 Aligned_cols=315 Identities=12% Similarity=0.067 Sum_probs=187.2
Q ss_pred HHHHHHHHHHHhhhCCCCCc-CCCcEEEeCChhHHHHHHHHHh--cCCCCeEEEeCCCCcChHHHHhhhcC---------
Q 011570 98 EFRNAVAKFMGKVRGNRITF-DPDRIVMSGGATGAHETVAFCL--ADPGDAFLVPTPYYPGFDRDLRWRTG--------- 165 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~-~~~~i~it~G~~~al~~~~~~l--~~~gd~Vlv~~P~y~~~~~~~~~~~G--------- 165 (483)
+-..++|+.+.+.. +- ....+++++++++++..++... ......|+...-.|++.....-.+.|
T Consensus 99 e~~v~~ae~L~~~~----p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~ 174 (447)
T COG0160 99 EPYVELAEKLTALA----PGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGF 174 (447)
T ss_pred hhHHHHHHHHHHhC----CcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCC
Confidence 44555555555432 12 3567999999999999998664 12345688888887654332211111
Q ss_pred ----cEEEEeecC--CCCCccc--------CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHhh
Q 011570 166 ----VQLVPVVCD--SSNDFKV--------TMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFINE 230 (483)
Q Consensus 166 ----~~~~~v~~~--~~~~~~~--------d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~~ 230 (483)
..+..+|.+ ..+.|.. ..+.++..+........++.++++...+.-.|.+. |.+.++++.++|++
T Consensus 175 ~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~ 254 (447)
T COG0160 175 GPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCRE 254 (447)
T ss_pred CCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHH
Confidence 123444433 2222222 23445555544433444677777776677778755 66679999999999
Q ss_pred cCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH-hhhcCC
Q 011570 231 KNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK-MSSFGL 309 (483)
Q Consensus 231 ~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~-~~~~~~ 309 (483)
||+++|+||+..++..+ ..+.++....- ...|+ ++||.+| .|+.+|.++. .+++.+.... ....+.
T Consensus 255 ~gillI~DEVQtG~GRT--G~~fa~E~~gv-------~PDiv--t~aK~ig-~G~Pl~avv~-r~ei~~~~~g~~~~Tf~ 321 (447)
T COG0160 255 HGILLIADEVQTGFGRT--GKMFAFEHFGV-------EPDIV--TLAKSLG-GGLPLSAVVG-RAEIMDWPPGGHGGTFG 321 (447)
T ss_pred cCCEEEEeccccCCCcc--ccchhhhhcCC-------CCCEE--Eeccccc-CCCceeEEec-cHHhcccCCcccCCCCC
Confidence 99999999999985333 34445443321 22233 7899999 7999999999 4555442211 222244
Q ss_pred CChHHHHHHHHhcCChh--HHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhc--cChHHHHHH
Q 011570 310 VSSQTQHLIATMLSDDQ--FVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKE--QTYEAEMAL 385 (483)
Q Consensus 310 ~s~~~q~~~~~~l~~~~--~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~--~~~~~~~~~ 385 (483)
.|+.+.+++.+.|+.-+ -+.++..+.-++++++...+.+.. ..--....-|+++-+++-+.-+. ........+
T Consensus 322 GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~---~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i 398 (447)
T COG0160 322 GNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKH---PLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKI 398 (447)
T ss_pred cCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhc---CceecccccceEEEEEEecCCCCCCCCHHHHHHH
Confidence 67777777666665211 122223333333333333333322 21112234468888888643211 222334466
Q ss_pred HHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 386 WRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 386 ~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
..++++ +|+.+..+..+ .+.+||.... +++++++++++.|.++++..
T Consensus 399 ~~~~~~-~Glil~~~G~~----~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 399 VARAFE-RGLLLLTCGPH----GNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred HHHHHH-cCCEEeccCCC----CcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 777775 59988765433 4689999976 49999999999999998764
No 284
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.66 E-value=1.2e-13 Score=140.07 Aligned_cols=298 Identities=12% Similarity=0.098 Sum_probs=176.5
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc------CCC-CeEEEeCCCCcChHHHHhhhcCcEE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA------DPG-DAFLVPTPYYPGFDRDLRWRTGVQL 168 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~------~~g-d~Vlv~~P~y~~~~~~~~~~~G~~~ 168 (483)
..++...+|+++.+.. ..+.+++++++++++..++..+. ++| ..|+..+.+|++.........|...
T Consensus 76 ~~~~~~~la~~l~~~~------~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~ 149 (395)
T PRK03715 76 YNEPMAKLAGLLTQHS------CFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPG 149 (395)
T ss_pred cCHHHHHHHHHHhhcc------CCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcc
Confidence 4677888899887531 24689999999999999998764 123 5788888888765433322223221
Q ss_pred E---EeecCCCCCc----ccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccc
Q 011570 169 V---PVVCDSSNDF----KVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFINEKNIHLVCDEI 240 (483)
Q Consensus 169 ~---~v~~~~~~~~----~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Dea 240 (483)
. ..|.. .++ ..|++.+++.+.+ ++.+|++...++..|.+. +.+.+++|.++|++||+++|+||+
T Consensus 150 ~~~~~~~~~--~~~~~~~~~d~~~l~~~l~~------~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv 221 (395)
T PRK03715 150 WDTIFAPQV--PGFPKAELNDIASVEKLITD------KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEV 221 (395)
T ss_pred cccCCCCCC--CCceeeCCchHHHHHHHcCC------CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 1 11111 111 1367888887742 566666665566667764 688999999999999999999999
Q ss_pred cccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh-hhcCCCChHHHHHHH
Q 011570 241 YAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM-SSFGLVSSQTQHLIA 319 (483)
Q Consensus 241 y~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~-~~~~~~s~~~q~~~~ 319 (483)
+.+ |+..........+.- .+| +.++||.+| .|+.+|.+++.+ ++....... ...+..++++.+++.
T Consensus 222 ~tG--~GRtG~~~a~~~~gv-----~PD----i~t~gK~lg-~G~p~~av~~~~-~i~~~~~~~~~~T~~g~pl~~aaal 288 (395)
T PRK03715 222 QTG--CGRTGTLFAYELSGI-----EPD----IMTLGKGIG-GGVPLAALLAKA-EVAVFEAGDQGGTYNGNPLMTAVGV 288 (395)
T ss_pred ccC--CCCCcchhhHhhcCC-----CCc----eeeehhhhh-CCcceEEEEEcc-ccccccCCCcCCCCCCCHHHHHHHH
Confidence 987 433122111111110 222 248899998 789999998854 443211111 111224555555444
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc----CCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCe
Q 011570 320 TMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ----VGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKL 395 (483)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV 395 (483)
+.|+- +++ ....+.+++.-+++.+.|++ .++..... -|+++-+.+..... ..-...+..++ +.||
T Consensus 289 a~L~~---l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~i~~vrG-~Glm~~i~l~~~~~----~~~~~~~~~~~-~~Gi 357 (395)
T PRK03715 289 AVISQ---LLA--PGFLEGVRARGEYLKEKLLELSEERGLEGERG-EGLLRALLLGKDIG----PQIVEKARDMQ-PDGL 357 (395)
T ss_pred HHHHH---HHh--ccHHHHHHHHHHHHHHHHHHHhhcCCcCeEEc-ceeEEEEEecCchH----HHHHHHHHhcc-CCCE
Confidence 44432 110 12233444444555555543 35433333 35677777753100 01112222222 2399
Q ss_pred EeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 396 NVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 396 ~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
.+.+.. ...+||+... ++++++++++++|++++++.
T Consensus 358 ~~~~~~------~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 358 LLNAPR------PNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred EEeecC------CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 886431 3579999976 59999999999999988753
No 285
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.66 E-value=2.8e-14 Score=141.57 Aligned_cols=337 Identities=17% Similarity=0.164 Sum_probs=185.3
Q ss_pred CcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE--
Q 011570 47 GVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM-- 124 (483)
Q Consensus 47 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i-- 124 (483)
..|+|-..||...+. +.+++...... ...++ +.....|+...-..++.+...+...+.++ +++++..+
T Consensus 21 ~~l~LiaSEN~~Sp~-v~~al~S~l~n--kyaeg---~pg~ryy~G~~~id~iE~la~~ra~~lF~----~~~~~w~anv 90 (399)
T PF00464_consen 21 STLNLIASENYMSPA-VREALGSDLTN--KYAEG---YPGKRYYGGCEYIDEIEELAIERAKELFG----AEPKEWYANV 90 (399)
T ss_dssp HSEE-CTT-----HH-HHHHHTSGGGG--S-TTE---ETTEESSSSTHHHHHHHHHHHHHHHHHHT-----STTTEEEE-
T ss_pred cCccccCcccccCHH-HHHHhCCccee--ecccc---CCCcccccCcchhhHHHHHHHHHHHHHhC----CCcccceEEe
Confidence 347888888876643 33433221000 00011 11112333333345666666677777776 45443222
Q ss_pred -eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH-----H-----hhhcCcEEEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 125 -SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD-----L-----RWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 125 -t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~-----~-----~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
..+++.|+..++.+|++|||+|+..++..+++... . .-. ..+.++++++++ +..+|.+++++.+++.
T Consensus 91 qp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~-~~~~~~y~~d~~-~~~ID~d~l~~~a~~~ 168 (399)
T PF00464_consen 91 QPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGL-YFESVPYPVDPD-TGLIDYDELEKLAKEH 168 (399)
T ss_dssp --SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHH-HSEEEEEEB-TT-TSSB-HHHHHHHHHHH
T ss_pred ecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccc-eEEEEeeeeecC-CCeECHHHHHHHHhhc
Confidence 24566788999999999999999998877655321 1 112 468888998853 5789999999999875
Q ss_pred HhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEE
Q 011570 194 QESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIV 273 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~ 273 (483)
++|+|++..-+.|- .-+.+++.++|.+.|.+++.|-+|......+ ..+++.... ..|+.
T Consensus 169 -----kPklIi~G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~~GLIa~-g~~~~P~~~----------ADvvt 227 (399)
T PF00464_consen 169 -----KPKLIICGASSYPR-----PIDFKRFREIADEVGAYLMADISHIAGLIAG-GLFPNPFPY----------ADVVT 227 (399)
T ss_dssp -------SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHT-TSS--GCCT----------SSEEE
T ss_pred -----CCCEEEECchhccC-----ccCHHHHHHHHHhcCcEEEecccccccceeh-heecCcccc----------ceEEE
Confidence 88987776433332 2237888888889999999999995443333 333332222 33778
Q ss_pred ecCccccCCCCceEEEEEec-------------ChHHHHHHHHhhhcCCCChH---HHHHHHHhcCChhHHHHHHHHHHH
Q 011570 274 YSLSKDMGFPGFRVGIIYSY-------------NDQVVSCARKMSSFGLVSSQ---TQHLIATMLSDDQFVEKFIAESAK 337 (483)
Q Consensus 274 ~S~SK~~g~~GlRiG~li~~-------------~~~l~~~~~~~~~~~~~s~~---~q~~~~~~l~~~~~~~~~~~~~~~ 337 (483)
+|..|+| +|-|-|.+++. .+.+.+.+.....++..+.+ ..++.+..+.. ......++..+
T Consensus 228 ~sThKtl--~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~e--a~~~~fk~Ya~ 303 (399)
T PF00464_consen 228 GSTHKTL--RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKE--ALSPEFKEYAK 303 (399)
T ss_dssp EESSGGG---SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHH--HTSHHHHHHHH
T ss_pred eeccccc--cccCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhc--ccCHHHHHHHH
Confidence 9999998 89999999996 36777777665444332222 11222222221 11122356667
Q ss_pred HHHHHHHHHHHhhhcCCceeec-CCceEEEeeecCch-hhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC---CCCEEE
Q 011570 338 RIAERHKAFTWGLSQVGIGCLK-SNAGLFLWMDLHHL-LKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP---NPGWFR 412 (483)
Q Consensus 338 ~l~~~~~~l~~~L~~~gi~~~~-~~~g~f~~~~l~~~-~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~---~~~~iR 412 (483)
++.++.+.|.+.|.+.|+++.. ...+-.+|+++... .+ ...+...|++.||.+..-...+.. .+..+|
T Consensus 304 qVv~NAk~La~~L~~~G~~v~~ggTd~H~vlvd~~~~~~~-------g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlR 376 (399)
T PF00464_consen 304 QVVKNAKALAEALQERGFKVVTGGTDNHQVLVDLRSFGID-------GKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLR 376 (399)
T ss_dssp HHHHHHHHHHHHHHHTT-EEGGGS-SSSEEEEEGGGGTS--------HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEE
T ss_pred HHHHHHHHHHHHHhhCCcEEEECCCCCCeEEEEecccccc-------hHHHHHHHHhcCeeecccccCCCCCCCCCCEEE
Confidence 7788999999999999998874 22345778888642 12 134667788999998543222211 235699
Q ss_pred EEecc-----CCHHHHHHHH
Q 011570 413 VCFAN-----MDDRTMEIAL 427 (483)
Q Consensus 413 is~~~-----~~~e~l~~~l 427 (483)
|+... ..++++++..
T Consensus 377 lGT~~lT~rG~~e~dm~~iA 396 (399)
T PF00464_consen 377 LGTPALTRRGMKEEDMKEIA 396 (399)
T ss_dssp EESHHHHHTT--HHHHHHHH
T ss_pred ECCHHHHhCCCCHHHHHHHH
Confidence 99843 2445555443
No 286
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.66 E-value=5.9e-13 Score=136.84 Aligned_cols=314 Identities=14% Similarity=0.098 Sum_probs=176.7
Q ss_pred HHHHHHHHHHHHhhhCCCCCcC-CCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCc-------
Q 011570 97 PEFRNAVAKFMGKVRGNRITFD-PDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGV------- 166 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~-~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~------- 166 (483)
.+....+|+.+.+... -. .+.|++++++++++..++.... .....|+...-+|.+.........+.
T Consensus 84 ~~~~~~lae~L~~~~p----~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~ 159 (445)
T PRK08593 84 HEPLVRLAKKLCELAP----GDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRK 159 (445)
T ss_pred CHHHHHHHHHHHHhCC----CCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccC
Confidence 3444555665554321 12 2589999999999999987531 12356888888887654322211121
Q ss_pred ------EEEEeecCCCC--Ccc-cCH-------HHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHHHHHHh
Q 011570 167 ------QLVPVVCDSSN--DFK-VTM-------EALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDIVSFIN 229 (483)
Q Consensus 167 ------~~~~v~~~~~~--~~~-~d~-------~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~~~a~ 229 (483)
.++.+|.++.. .+. .+. +.+++.+.+.. ...++.+|++....+..|.+ .+.+.+++|.++|+
T Consensus 160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~ 238 (445)
T PRK08593 160 YGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYL-PADEVACIVIETIQGDGGLLEPVPGYFEALYKFCR 238 (445)
T ss_pred CCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhc-CCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH
Confidence 12223322110 010 111 23333332210 12357666666657777886 68889999999999
Q ss_pred hcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh-c-
Q 011570 230 EKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS-F- 307 (483)
Q Consensus 230 ~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~-~- 307 (483)
+||+++|.||++.++...+ .+.....+.- .++ + -++||.+| .|+++|++++ ++.+.+.+..... +
T Consensus 239 ~~g~llI~DEv~tg~GrtG--~~~a~~~~gv-----~pD--i--~t~gK~l~-~G~p~gav~~-~~~i~~~~~~~~~~~T 305 (445)
T PRK08593 239 EHGILFAVDDIQQGLGRTG--KWSSISHFNI-----TPD--L--MSFGKSLA-GGMPMSAIVG-RKEIMESLEAPAHLFT 305 (445)
T ss_pred HcCCEEEEechhhCCCcCc--hHHHHHhcCC-----CCC--E--eeeccccc-CCcccEEEEE-cHHHHhhhccCCCCCC
Confidence 9999999999997643222 1111121210 223 2 38899998 8899999999 5666665532111 1
Q ss_pred CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc----CCceeecCCceEEEeeecCchh--hccChHH
Q 011570 308 GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ----VGIGCLKSNAGLFLWMDLHHLL--KEQTYEA 381 (483)
Q Consensus 308 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~gi~~~~~~~g~f~~~~l~~~~--~~~~~~~ 381 (483)
...++++.+++.+.|+.-. + ....++.++.-+++.+.|++ +++......-|+++.+.+.... .......
T Consensus 306 ~~~~pl~~aaa~a~l~~l~---~--~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~ 380 (445)
T PRK08593 306 TGANPVSCAAALATIDMIE---D--ESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEA 380 (445)
T ss_pred CCCCHHHHHHHHHHHHHHH---h--ccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHH
Confidence 2356666666555553211 0 11222233333344444433 3333333344566666664211 0011112
Q ss_pred HHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhhc
Q 011570 382 EMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 382 ~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
...+...+++ +||.+.+.. .+.+|++... ++++++++++++|.+++++..+.
T Consensus 381 ~~~~~~~~~~-~Gv~~~~~~------~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~~ 433 (445)
T PRK08593 381 ALKICNYCFE-HGVVIIAVA------GNVLRFQPPLVITYEQLDTALNTIEQAFTALEAG 433 (445)
T ss_pred HHHHHHHHHH-CCeEEeccC------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHhcc
Confidence 3356677764 699986531 2579999976 59999999999999999876544
No 287
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.66 E-value=2.2e-13 Score=140.08 Aligned_cols=317 Identities=13% Similarity=0.061 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCc-EEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCc-------
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDR-IVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGV------- 166 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~-i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~------- 166 (483)
.+.+..+|+.+.+.... ...... +++++++++++..++.... ....+|+...-+|.+.........|.
T Consensus 81 ~~~~~~lae~L~~~~p~--~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~ 158 (442)
T TIGR00709 81 TPLKDAFIEALLNIIPK--RKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAV 158 (442)
T ss_pred cHHHHHHHHHHHHhCCC--cCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccC
Confidence 45666677776654320 001134 4556899999998886542 22357898898888766443332221
Q ss_pred -----EEEEeecCCCC--Ccc----cCHHH----HHHHHHHHHhcCCceeEEEEeCC-CCCCcCCCCHHHHHHHHHHHhh
Q 011570 167 -----QLVPVVCDSSN--DFK----VTMEA----LEAAYEKAQESNIRIKGVLITNP-SNPLGTFLDRETLKDIVSFINE 230 (483)
Q Consensus 167 -----~~~~v~~~~~~--~~~----~d~~~----l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~~~~~~~l~~i~~~a~~ 230 (483)
.+..++.+... .|. .+.+. +++.+........++.+|++... +|+...+.+.+.++++.++|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~ 238 (442)
T TIGR00709 159 GMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRK 238 (442)
T ss_pred CCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 12222222110 011 01222 23333211111135666666654 4554456899999999999999
Q ss_pred cCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH--hhhcC
Q 011570 231 KNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK--MSSFG 308 (483)
Q Consensus 231 ~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~--~~~~~ 308 (483)
||+++|.||++.++...+ .+.+...+.- .+| ++ ++||.+| .|+++|+++++++ + +.+.. ....+
T Consensus 239 ~g~llI~DEV~tGfGRtG--~~~a~~~~gv-----~PD--iv--~~gK~l~-~G~Pigav~~~~~-~-~~~~~~~~~~T~ 304 (442)
T TIGR00709 239 HDIKLILDEVQAGFGRSG--TMFAFEHAGI-----EPD--FV--VMSKAVG-GGLPLAVLLIAPE-F-DAWQPAGHTGTF 304 (442)
T ss_pred cCCEEEEeccccCCCCCC--chhHHHHcCC-----CCc--EE--EEccccc-CCcccEEEEEchH-H-hccCCCcCCCCC
Confidence 999999999998854443 2333333211 223 33 3799999 5999999999544 4 22211 11123
Q ss_pred CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc----CCceeecCCceEEEeeecCchhhcc-------
Q 011570 309 LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ----VGIGCLKSNAGLFLWMDLHHLLKEQ------- 377 (483)
Q Consensus 309 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~gi~~~~~~~g~f~~~~l~~~~~~~------- 377 (483)
..++++++++.+.|+.-. + ....+.++++.+++.+.|++ +++......-|+++.+++.......
T Consensus 305 ~gnpla~aaa~a~L~~i~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~ 379 (442)
T TIGR00709 305 RGNQLAMVTGTEALNYWK--D---DNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYP 379 (442)
T ss_pred CcCHHHHHHHHHHHHHHH--h---cCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCC
Confidence 367888887777764311 1 11222334444445554443 2332233344677778774321000
Q ss_pred -ChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 378 -TYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 378 -~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
.......+...++ ++||++.+... ..+.+|+..+. ++++++++++++|.+++++..+
T Consensus 380 ~~~~~~~~~~~~~~-~~Gvl~~~~~~----~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~~ 438 (442)
T TIGR00709 380 RDCELAAAIQGACF-ENGLLLETGGR----EGEVFRLLCPITIDQEECEEGISRFKQAVEEALA 438 (442)
T ss_pred cchHHHHHHHHHHH-HCCeEEeecCC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0111234555555 56999876432 23579999876 5999999999999999987643
No 288
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.65 E-value=1e-13 Score=136.16 Aligned_cols=336 Identities=14% Similarity=0.156 Sum_probs=202.1
Q ss_pred CCCCcccccchhhhhc----HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 44 NPNGVIQMGLAENLLC----HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 44 ~~~~~i~l~~~~n~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
..+.+||+..+.-++. ++.+.+++.+.. ..-..|+.+ .++.-.+|+.+.++.+ +.
T Consensus 51 DGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l-------------~~G~~fg~P---te~Ei~~Aell~~~~p-----~~ 109 (432)
T COG0001 51 DGNEYIDYVLGWGPLILGHAHPAVVEAVQEQL-------------ERGLSFGAP---TELEVELAELLIERVP-----SI 109 (432)
T ss_pred CCCEeeehhccCcccccCCCCHHHHHHHHHHH-------------HhcCCCCCC---CHHHHHHHHHHHHhcC-----cc
Confidence 3455788887765542 455666665421 122456544 4566677777776543 45
Q ss_pred CcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcC--c-----------------EEEEeecCCCCC
Q 011570 120 DRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTG--V-----------------QLVPVVCDSSND 178 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G--~-----------------~~~~v~~~~~~~ 178 (483)
+.|-++|++|||...+++... ..-|+|+..+-||.+..+.+....| . .++.+|
T Consensus 110 e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~------ 183 (432)
T COG0001 110 EKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLP------ 183 (432)
T ss_pred cEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEec------
Confidence 899999999999998886641 2237899999999887776543222 1 122222
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEeCC--CCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchH
Q 011570 179 FKVTMEALEAAYEKAQESNIRIKGVLITNP--SNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSI 255 (483)
Q Consensus 179 ~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P--~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~ 255 (483)
|+ |++.+++++++. +.++.+|++ .| .| .|.+. .++.+++|.++|++||+++|.||+...+...- ......
T Consensus 184 yN-D~~al~~~~~~~---g~~IAaVIv-EPv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~-gGaq~~ 256 (432)
T COG0001 184 YN-DLEALEEAFEEY---GDDIAAVIV-EPVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVAL-GGAQGY 256 (432)
T ss_pred CC-CHHHHHHHHHHc---CCcEEEEEe-ccccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCC-cccccc
Confidence 22 899999998763 345655554 45 56 46655 55669999999999999999999998764442 222233
Q ss_pred HHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc-----CCCChHHHHHHHHhcCChhHHHH
Q 011570 256 AEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF-----GLVSSQTQHLIATMLSDDQFVEK 330 (483)
Q Consensus 256 ~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~-----~~~s~~~q~~~~~~l~~~~~~~~ 330 (483)
..+. +| +.+|+|..| .|+.+|.+-+ .+++.+.+...... .+.++++..|..+.+..-. +
T Consensus 257 ~gi~-------PD----lttlGKiIG-GGlP~ga~gG-r~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~---~ 320 (432)
T COG0001 257 YGVE-------PD----LTTLGKIIG-GGLPIGAFGG-RAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELM---T 320 (432)
T ss_pred cCcC-------cc----hhhhhhhhc-CCcceeeecc-HHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHH---h
Confidence 3332 22 458999999 9999999888 56676654332221 2245555555444443211 0
Q ss_pred HHHHHHHHHHHHHHHHH----HhhhcCCceeec-CCceEEEeeecCc-h--h-h--ccChHHHHHHHHHHHHhcCeEeeC
Q 011570 331 FIAESAKRIAERHKAFT----WGLSQVGIGCLK-SNAGLFLWMDLHH-L--L-K--EQTYEAEMALWRVIINEVKLNVSP 399 (483)
Q Consensus 331 ~~~~~~~~l~~~~~~l~----~~L~~~gi~~~~-~~~g~f~~~~l~~-~--~-~--~~~~~~~~~~~~~Ll~~~gV~v~p 399 (483)
.+...+++.+..++|. +.+.++|+++.. ..|++|-..-.+. . . + ....+.-..++..|++ .||.+.|
T Consensus 321 -~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~-~GV~l~p 398 (432)
T COG0001 321 -EEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLN-RGVYLAP 398 (432)
T ss_pred -cccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHh-CCcccCC
Confidence 0002233333334444 444455776653 2333333221111 1 0 0 0111223456777775 4999988
Q ss_pred CCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhh
Q 011570 400 GSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 400 g~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+. | .. .=+|.+ .++++++..++++.++++...
T Consensus 399 s~-~----ea-~flS~a-hte~di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 399 SQ-F----EA-GFLSTA-HTEEDIDRTLEAADEAFKELA 430 (432)
T ss_pred cc-c----cc-eeeecc-cCHHHHHHHHHHHHHHHHHhh
Confidence 75 2 12 236666 599999999999998887764
No 289
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.65 E-value=5.2e-14 Score=142.15 Aligned_cols=287 Identities=12% Similarity=0.079 Sum_probs=177.5
Q ss_pred cHHHHHHHHHHHHhhhCCCCCc-CCCcEEEeC-ChhHHHHHHHHHhcCC-CCeEEEeCCCCcChHHH-H-hhhcCc-EEE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITF-DPDRIVMSG-GATGAHETVAFCLADP-GDAFLVPTPYYPGFDRD-L-RWRTGV-QLV 169 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~-~~~~i~it~-G~~~al~~~~~~l~~~-gd~Vlv~~P~y~~~~~~-~-~~~~G~-~~~ 169 (483)
+.+.|+.++++++ . ++++|+++. ++|.+++.++..++++ ++.|++ .-.|+.-... + +.. |. ++.
T Consensus 50 ~~~~r~~l~~l~~--------~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~-g~~~v~ 119 (378)
T PRK03080 50 LKRVIEGTRELLS--------LPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSKWATDVVKQL-KLEDPR 119 (378)
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhc-CCCCce
Confidence 3566777777765 3 345799886 8999999999999875 445554 3345442222 2 343 88 888
Q ss_pred EeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC
Q 011570 170 PVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE 249 (483)
Q Consensus 170 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~ 249 (483)
.++.++ +..+|+++++ .++.|.+++.+|.||...+ +++|++ +++|+++|+|-+.+ ++.
T Consensus 120 ~~~~~~--g~~~d~~~i~-----------~~~~V~~~h~~t~tG~~~p---i~~I~~--~~~g~~~vVDa~qs---~G~- 177 (378)
T PRK03080 120 VLEADY--GSLPDLSAVD-----------FDRDVVFTWNGTTTGVRVP---VARWIG--ADREGLTICDATSA---AFA- 177 (378)
T ss_pred EeccCC--CCCCCHhhcC-----------CCCCEEEEecCCccceecc---chhhcc--ccCCCeEEEecccc---ccc-
Confidence 887653 3356766532 2456899999999999999 666666 67899999999986 333
Q ss_pred CCcchHHHhhhhccccCCCeEEEEecCccccCC-CCceEEEEEecChHHHHHHHHhh--------------------h--
Q 011570 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF-PGFRVGIIYSYNDQVVSCARKMS--------------------S-- 306 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~-~GlRiG~li~~~~~l~~~~~~~~--------------------~-- 306 (483)
.+ .++.. ..+++.|..|.++. +| +|+++.+++.+ +.+.... .
T Consensus 178 ~p-idv~~-----------iD~~~~s~~K~l~~P~G--~g~l~v~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (378)
T PRK03080 178 LP-LDWSK-----------LDVYTFSWQKVLGGEGG--HGMAILSPRAV-ERLESYTPARPIPKFFRLTKGGKAIENSFK 242 (378)
T ss_pred CC-CCHHH-----------CcEEEEehhhhCCCCCc--eEEEEECHHHH-HhhhcccCCCCCchhheeccchHHhhhhhc
Confidence 22 33322 23778899999853 55 89999854433 3222110 0
Q ss_pred cCCCChHH---HHHHHHhcCChhHHHHH--HHHHHHHHHHHHHHHHHhhhcCC-ceeecC----CceEEEeeecCchhhc
Q 011570 307 FGLVSSQT---QHLIATMLSDDQFVEKF--IAESAKRIAERHKAFTWGLSQVG-IGCLKS----NAGLFLWMDLHHLLKE 376 (483)
Q Consensus 307 ~~~~s~~~---q~~~~~~l~~~~~~~~~--~~~~~~~l~~~~~~l~~~L~~~g-i~~~~~----~~g~f~~~~l~~~~~~ 376 (483)
.+..+++. ..++.++++ ++.+. ++...++.++..+++.+.|++.+ +.+..+ .++..+.+.++.. +
T Consensus 243 ~~t~~tp~i~~i~~l~~al~---~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~-~- 317 (378)
T PRK03080 243 GQTINTPSMLTVEDYLDQLD---WANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDA-Q- 317 (378)
T ss_pred CCcccCchHHHHHHHHHHHH---HHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCc-h-
Confidence 01111222 222222222 22221 45556677777888888888875 555421 2223455566640 0
Q ss_pred cChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 377 QTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 377 ~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
.. ...++...++++ ||.++.|... ...+.+|+|+.. .++++++.+++.|++++++.+.
T Consensus 318 ~~--~~~~~~~~l~~~-~i~v~~g~~~--~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 318 AA--VDAAAVAKLLRE-NGAVDIEPYR--DAPNGLRIWCGPTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred HH--HHHHHHHHHHHc-CCeecccccc--CCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 00 112455666655 8888876532 134689999976 6999999999999998876653
No 290
>PRK06541 hypothetical protein; Provisional
Probab=99.65 E-value=2.4e-13 Score=140.11 Aligned_cols=309 Identities=15% Similarity=0.117 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc------C-C-CCeEEEeCCCCcChHHHHhhhcCc---
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA------D-P-GDAFLVPTPYYPGFDRDLRWRTGV--- 166 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~------~-~-gd~Vlv~~P~y~~~~~~~~~~~G~--- 166 (483)
+....+|+.+.+... -..+.+++++++++++..++.... . + ..+|+...-+|.+.........|.
T Consensus 95 ~~~~~la~~l~~~~p----~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~ 170 (460)
T PRK06541 95 PPAIELAERLAALAP----GDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAF 170 (460)
T ss_pred HHHHHHHHHHHHhCC----CCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhh
Confidence 444555655554321 124689999999999998886542 1 1 367888888887654332211121
Q ss_pred ---------EEEEeecCCCCC---cccC--------HHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcCCCC-HHHHHHH
Q 011570 167 ---------QLVPVVCDSSND---FKVT--------MEALEAAYEKAQESNIRIKGVLITNP-SNPLGTFLD-RETLKDI 224 (483)
Q Consensus 167 ---------~~~~v~~~~~~~---~~~d--------~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~~~~-~~~l~~i 224 (483)
.+..+|.+.... |.-+ ++.+++.+.. .+++..+.++..| ++++|.+.+ .+.+++|
T Consensus 171 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l 247 (460)
T PRK06541 171 KAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEF---EGPDTVAAVFLEPVQNAGGCFPPPPGYFERV 247 (460)
T ss_pred ccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHh---cCCCCEEEEEECCccCCCCCccCCHHHHHHH
Confidence 112222211000 1112 2455555542 1223345556667 889999765 8889999
Q ss_pred HHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCc-eEEEEEecChHHHHHHHH
Q 011570 225 VSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGF-RVGIIYSYNDQVVSCARK 303 (483)
Q Consensus 225 ~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~li~~~~~l~~~~~~ 303 (483)
.++|++||+++|.||++.++...+ .......+.- .+| ++ +|||.+| .|+ ++|+++++ +.+.+.+..
T Consensus 248 ~~lc~~~g~llI~DEV~tGfGR~G--~~~a~~~~gv-----~PD--iv--t~gK~l~-~G~~pigav~~~-~~i~~~~~~ 314 (460)
T PRK06541 248 REICDRYDVLLVSDEVICAFGRLG--EMFGCERFGY-----VPD--II--TCAKGIT-SGYSPLGAMIAS-DRLFEPFLD 314 (460)
T ss_pred HHHHHHcCCEEEEechhhCCCcCc--hhhhhhhcCC-----CCC--EE--Eeccccc-CCccceeEEEEc-HHHHHHhhc
Confidence 999999999999999997642222 1112211110 223 22 6899998 887 99999994 555554432
Q ss_pred h-hhc-----CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC---Cc-eeecCCceEEEeeecCch
Q 011570 304 M-SSF-----GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV---GI-GCLKSNAGLFLWMDLHHL 373 (483)
Q Consensus 304 ~-~~~-----~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~---gi-~~~~~~~g~f~~~~l~~~ 373 (483)
. ..+ ...++++.+++.+.++. ++ .....+.++++.+++.+.|+++ ++ ...... |.++-+++...
T Consensus 315 ~~~~~~~~~T~~gnp~~~aaala~l~~---l~--~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~-Gl~~~ie~~~~ 388 (460)
T PRK06541 315 GPTMFLHGYTFGGHPVSAAVALANLDI---FE--REGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGD-GYFYGIELVKD 388 (460)
T ss_pred CCCccccCCCCCCCHHHHHHHHHHHHH---HH--hccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec-ceEEEEEEecC
Confidence 1 111 22355555544444332 11 1123345566666676666654 22 123344 45666776421
Q ss_pred hhc-----cCh-H--HHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 374 LKE-----QTY-E--AEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 374 ~~~-----~~~-~--~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
... ... . ....+...++ ++||.+.+.. .+...+||+... ++++++++++++|.+++++.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~----~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06541 389 KATKETFTDDESERLLRGFLSPALF-EAGLYCRADD----RGDPVVQLAPPLISGQEEFDEIEQILRSVLTEA 456 (460)
T ss_pred cccccCCcchhhhhhHHHHHHHHHH-hCCeEEEecC----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 100 000 0 0124556666 4699998631 124579999976 59999999999999998753
No 291
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.64 E-value=6.5e-13 Score=136.39 Aligned_cols=311 Identities=11% Similarity=0.069 Sum_probs=175.9
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCc--------
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGV-------- 166 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~-------- 166 (483)
.+....+|+.+.+..+. -..+.+++++++++++..++.... ....+|+...-+|.+.........|.
T Consensus 96 ~~~~~~lAe~L~~~~p~---~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~ 172 (441)
T PRK05769 96 YEPAVELAERLVEIAPG---GFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGF 172 (441)
T ss_pred CHHHHHHHHHHHHhCCC---CCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCC
Confidence 34556677776654210 013689999999999999886532 22367888888887765432221121
Q ss_pred -----EEEEeecCCC--CCcc-cC--------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHh
Q 011570 167 -----QLVPVVCDSS--NDFK-VT--------MEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFIN 229 (483)
Q Consensus 167 -----~~~~v~~~~~--~~~~-~d--------~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~ 229 (483)
.+..++.+.. ..|. -+ ++.+++.+.+......++.+|++.......|.+. +.+.+++|.++|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~ 252 (441)
T PRK05769 173 FPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLAD 252 (441)
T ss_pred CCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHH
Confidence 1223332210 0011 01 2234442221101123566655554455567754 6788999999999
Q ss_pred hcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh-hcC
Q 011570 230 EKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS-SFG 308 (483)
Q Consensus 230 ~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~-~~~ 308 (483)
+||+++|+||++.++...+ .+.....+.- .+| ++ +|||.+| .|+++|+++++ +.+........ ..+
T Consensus 253 ~~g~lli~DEv~tG~gr~G--~~~a~~~~gv-----~pD-iv---t~~K~l~-~G~p~gav~~~-~~i~~~~~~~~~~T~ 319 (441)
T PRK05769 253 KYGILLIDDEVQTGMGRTG--KMFAIEHFGV-----EPD-II---TLAKAIA-GGLPLGAVIGR-AELMFLPPGSHANTF 319 (441)
T ss_pred HcCCEEEEechhhCCCccc--ceehhhccCC-----CCC-EE---EEccccc-CCcccEEEEEe-hhhhhcCCCCCCCCC
Confidence 9999999999998743332 2222222211 222 22 6899998 89999999984 44444322111 112
Q ss_pred CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC----CceeecCCceEEEeeecCchhhccChHHHHH
Q 011570 309 LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV----GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMA 384 (483)
Q Consensus 309 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~ 384 (483)
..+++++.++.+.|+- +++ ...+++++.-+++.+.|+++ ++......-|+++-+.+..............
T Consensus 320 ~g~p~~~aaa~a~L~~---l~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~ 393 (441)
T PRK05769 320 GGNPVAAAAALATLEE---LEE---GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDK 393 (441)
T ss_pred CcCHHHHHHHHHHHHH---HHH---HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHH
Confidence 3467777666666542 221 23344445555555555443 3322233335677777743211111112235
Q ss_pred HHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 385 LWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 385 ~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
+...++ ++||.+.+. +...+|++... ++++++++++++|.+++.+
T Consensus 394 ~~~~~~-~~Gil~~~~------~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 394 VLYEAF-KRGLLLLGA------GKSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred HHHHHH-hCCcEEecC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 566666 469998753 23579999876 5999999999999998865
No 292
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.64 E-value=1.8e-13 Score=139.26 Aligned_cols=313 Identities=12% Similarity=0.086 Sum_probs=195.7
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcC-C-CcEEE--eCChhHHHHHHHHHhc--------CCC-----CeEEEeCCCCcChHH
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFD-P-DRIVM--SGGATGAHETVAFCLA--------DPG-----DAFLVPTPYYPGFDR 158 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~-~-~~i~i--t~G~~~al~~~~~~l~--------~~g-----d~Vlv~~P~y~~~~~ 158 (483)
..++.+.+-+|+.+..| ++ + +++.. |+|+|+++..++.+.. ..| ..|+++.-.|.++..
T Consensus 78 ~~~le~~~~~~la~llg----~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~k 153 (431)
T TIGR01788 78 TAEIENRCVNMLADLWH----APAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEK 153 (431)
T ss_pred HHHHHHHHHHHHHHHhC----CCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHH
Confidence 34777777777777766 34 2 45544 8999999998876542 111 368889999999999
Q ss_pred HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc------C
Q 011570 159 DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK------N 232 (483)
Q Consensus 159 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~------~ 232 (483)
.++.+ |+++..+|+++ +++.+|++.|+++|.+ ++.+|+++..||.||.+-| +++|+++|+++ |
T Consensus 154 a~~~l-g~~v~~i~~d~-~~~~vd~~~L~~~i~~------~t~lV~~t~g~t~tG~idp---i~~I~~i~~~~~~~~~~~ 222 (431)
T TIGR01788 154 FARYF-DVELREVPMDP-GRYVIDPEQVVEAVDE------NTIGVVCILGTTYTGEYED---VKALNDALDEYNAKTGWD 222 (431)
T ss_pred HHHHc-CceeEEEecCC-CceeeCHHHHHHHHhh------CCeEEEEEeCCCCCcccCC---HHHHHHHHHHHHhhhCCC
Confidence 88876 99999999876 3468999999999975 6788999999999999999 77788888888 9
Q ss_pred cEEEEccccccCc--cCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChH-HHHHHHHhhhcC-
Q 011570 233 IHLVCDEIYAATV--FTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQ-VVSCARKMSSFG- 308 (483)
Q Consensus 233 ~~iI~Deay~~~~--~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~-l~~~~~~~~~~~- 308 (483)
+++++|.+|+... |........+. . .....+.-|.+|.+ +....+|.++..++. +...+.....+.
T Consensus 223 ~~~HvDaaq~g~~~p~~~~~~~~~~~-~--------~~~DSis~s~HK~~-~~P~g~G~l~~r~~~~l~~~~~~~~~yl~ 292 (431)
T TIGR01788 223 IPIHVDAASGGFIAPFVYPDLEWDFR-L--------PRVKSINVSGHKYG-LVYPGVGWVIWRDEEALPEELIFHVNYLG 292 (431)
T ss_pred ceEEEecccHHHHHHHhCCCchhhcC-C--------CCceEEEECchhcc-CCCCCcEEEEEeChHHcchhheecccccC
Confidence 9999999998542 11101101111 1 12233456999975 233448988885542 222221110110
Q ss_pred --------CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecC--CceEEEeeecCchhhcc
Q 011570 309 --------LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKS--NAGLFLWMDLHHLLKEQ 377 (483)
Q Consensus 309 --------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~--~~g~f~~~~l~~~~~~~ 377 (483)
..+...-.++..++.-..+-..-+++..++..+..+++.+.|++. ++++..+ ..+ .+.++++...+ .
T Consensus 293 ~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~-iV~Fr~~~~~~-~ 370 (431)
T TIGR01788 293 GDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIP-LVAFKLKDDAD-P 370 (431)
T ss_pred CCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCce-EEEEEeCCCCC-C
Confidence 011111112222221000001223555666777888899999887 5887754 444 55566653110 0
Q ss_pred ChHHHHHHHHHHHHhcCeEeeCCCCCC-CCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 378 TYEAEMALWRVIINEVKLNVSPGSSFH-CPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 378 ~~~~~~~~~~~Ll~~~gV~v~pg~~f~-~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
.. +..++.+.|. +.|+.+....... ..+.-++|+++.. .+.+.++.+++.|++++...
T Consensus 371 ~~-~~~~l~~~L~-~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 371 GY-TLYDLSHRLR-ERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred Cc-CHHHHHHHHH-HCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 11 1235666665 5698653322111 1122369999953 58899999999999888654
No 293
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.63 E-value=3.8e-13 Score=137.41 Aligned_cols=305 Identities=11% Similarity=0.075 Sum_probs=175.0
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC-----CCCeEEEeCCCCcChHHHHhhhcCcEEE--
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD-----PGDAFLVPTPYYPGFDRDLRWRTGVQLV-- 169 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~-----~gd~Vlv~~P~y~~~~~~~~~~~G~~~~-- 169 (483)
.+.+..+|+.+.+... -..+.+++++++++++..++..... ....|+....+|.+.........+-...
T Consensus 116 ~~~~~~lAe~L~~~~p----~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~ 191 (442)
T TIGR03372 116 DPLRALLAKTLAALTP----GKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRK 191 (442)
T ss_pred CHHHHHHHHHHHHhCC----CCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCC
Confidence 3455556666554322 1236799999999999999875421 2367899998887765433322121100
Q ss_pred -EeecCCCCC--cccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccccccCc
Q 011570 170 -PVVCDSSND--FKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYAATV 245 (483)
Q Consensus 170 -~v~~~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~~~ 245 (483)
..|+.+.-. -..|.+.+++.+++....+.++.+|++..-..-.|.+. +++.++++.++|++||+++|.||++.+
T Consensus 192 ~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG-- 269 (442)
T TIGR03372 192 PFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTG-- 269 (442)
T ss_pred CCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccC--
Confidence 011110000 01257778777754333334566666654455567755 678899999999999999999999976
Q ss_pred cCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh----hhcCCCChHHHHHHHH
Q 011570 246 FTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM----SSFGLVSSQTQHLIAT 320 (483)
Q Consensus 246 ~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~----~~~~~~s~~~q~~~~~ 320 (483)
|+....+.....+.- .+| |+ +++|.+| .| +.+|.+++. +++.+.+... .+.+..++++.+++.+
T Consensus 270 ~GRtG~~~a~e~~gv-----~PD--iv--t~gK~lg-~G~~Pigavv~~-~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a 338 (442)
T TIGR03372 270 MGRTGKMFACEHEGV-----QPD--IL--CLAKALG-GGVMPIGATIAT-EAVFSVLFDNPFLHTTTFGGNPLACAAALA 338 (442)
T ss_pred CCccccchhhhhcCC-----CCC--ee--eehhhhc-CCcccceEEEec-HHHHHhhhccCccccCCCCCCHHHHHHHHH
Confidence 433122222222211 223 32 5899998 88 699999984 5565554211 1112246666666555
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC----C-ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCe
Q 011570 321 MLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV----G-IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKL 395 (483)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----g-i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV 395 (483)
.|+-- ++ +...++.++.-+++.+.|+++ + .-.....-|+++.+.+... .....+...+++ +||
T Consensus 339 ~L~~i---~~--~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~------~~~~~i~~~l~~-~Gv 406 (442)
T TIGR03372 339 TINEL---LE--KNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDN------EIGYAFAKELFQ-QNI 406 (442)
T ss_pred HHHHH---Hh--ccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCCh------HHHHHHHHHHHH-CCc
Confidence 55321 10 011122233333344444332 2 1112224467888888642 112356777775 699
Q ss_pred EeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 396 NVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 396 ~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
++.+.. + ..+.+||.... ++++++++++++|.+++
T Consensus 407 l~~~~~-~---~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 407 LVAGTL-N---NAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred EEeecC-C---CCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 987532 1 23579999976 59999999999998753
No 294
>PLN03032 serine decarboxylase; Provisional
Probab=99.63 E-value=2.4e-13 Score=135.53 Aligned_cols=286 Identities=12% Similarity=0.088 Sum_probs=185.5
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcE--EEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRI--VMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i--~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v 171 (483)
..++.+.+.+++.+.+| .+++++ ++|+|+|+++...+.+.. .++..|+++.-.|.++..+++.+ |.++..+
T Consensus 64 a~~~e~~v~~~ia~llg----~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~l-g~~~~~V 138 (374)
T PLN03032 64 SRQFEVGVLDWFARLWE----LEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMY-RMEAVKV 138 (374)
T ss_pred HHHHHHHHHHHHHHHhC----CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHc-CCCCeEe
Confidence 47777777777777766 567776 999999999988876643 24568899999999999888876 8888888
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcC-----cEEEEccccccCcc
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKN-----IHLVCDEIYAATVF 246 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~-----~~iI~Deay~~~~~ 246 (483)
|++. ++.+|+++|+++|++. ..++.+|+++..+|+||.+-+ +++|+++|+++| +|+++|.+|+....
T Consensus 139 ~~d~--~g~id~~~L~~~i~~~---~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~ 210 (374)
T PLN03032 139 PTLP--SGEIDYDDLERALAKN---RDKPAILNVNIGTTVKGAVDD---LDRILRILKELGYTEDRFYIHCDGALFGLMM 210 (374)
T ss_pred eeCC--CCcCcHHHHHHHHHHc---CCCCEEEEEEecCcCCccCCC---HHHHHHHHHHhCCCCCCeeEEEEccchhhhh
Confidence 8875 4589999999999752 124667888889999999988 777788888886 59999999976421
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc-------CCCCh-----HH
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF-------GLVSS-----QT 314 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~-------~~~s~-----~~ 314 (483)
.-... .+...+. ..-..+.-|.+|..| ....+|.++..++.+ ..+.....+ ...+. +.
T Consensus 211 p~~~~-~~~~~~~-------~~vDSis~s~HK~~g-~P~g~G~ll~r~~~~-~~~~~~~~Yl~~~d~ti~gSR~g~~~l~ 280 (374)
T PLN03032 211 PFVSR-APEVTFR-------KPIGSVSVSGHKFLG-CPMPCGVALTRKKHV-KALSQNVEYLNSRDATIMGSRNGHAPLY 280 (374)
T ss_pred hccCC-CcccCCC-------cCCcEEEECcccccC-CCcCeEEEEEEchhh-HhhccCCcccCCCCCcccCCCchHHHHH
Confidence 10000 0001111 112234569999876 456689999865433 322211111 01121 12
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceee-cCCceEEEeeecCchhhccChHHHHHHHHHHHHhc
Q 011570 315 QHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCL-KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEV 393 (483)
Q Consensus 315 q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~-~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~ 393 (483)
..+....+...+ +.+..+...+..+++.+.|++.++++. .|.. +.+.++-+.. + .+.+
T Consensus 281 ~w~~l~~~G~~g-----~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~~-~~V~f~~~~~----------~---~~~~-- 339 (374)
T PLN03032 281 LWYTLRRKGYRG-----IKRDVQHCMRNAHYLKDRLTEAGLTCRLNELS-STVVFERPMD----------E---AFIK-- 339 (374)
T ss_pred HHHHHHHhCHHH-----HHHHHHHHHHHHHHHHHHHHhCCCcEEECCCc-eEEEEcCCCc----------H---hHhh--
Confidence 222223333332 355566677788889999988888754 4554 4555554420 1 1222
Q ss_pred CeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHH
Q 011570 394 KLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITS 432 (483)
Q Consensus 394 gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~ 432 (483)
|..+.+- .+++|+++.. .+.+.++++++.|++
T Consensus 340 ~w~l~~~-------~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 340 KWQLACE-------GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred eeeeccc-------CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 4444421 2479999975 577888988888764
No 295
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.63 E-value=4.9e-13 Score=137.54 Aligned_cols=309 Identities=12% Similarity=0.090 Sum_probs=180.5
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc---C-CC-CeEEEeCCCCcChHHHHhhhcCcEEEE-
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA---D-PG-DAFLVPTPYYPGFDRDLRWRTGVQLVP- 170 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~---~-~g-d~Vlv~~P~y~~~~~~~~~~~G~~~~~- 170 (483)
.+.+..+|+.+.+... -..+.+++++++++++..++.... . +| ..|+....+|.+.........|.....
T Consensus 123 ~~~~~~lae~L~~~~p----~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~ 198 (459)
T PRK11522 123 DPLRAMLAKTLAALTP----GKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRK 198 (459)
T ss_pred CHHHHHHHHHHHHhCC----CCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCccccc
Confidence 4555666666654321 234689999999999999987542 1 23 468888888877654332221211111
Q ss_pred --eecCCC---CCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccccccC
Q 011570 171 --VVCDSS---NDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYAAT 244 (483)
Q Consensus 171 --v~~~~~---~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~~ 244 (483)
.|..+. -.| .|.+.+++.++.....+.++.+|++.....-.|.+. |.+.++++.++|++||+++|.||++.+
T Consensus 199 ~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG- 276 (459)
T PRK11522 199 PFMPLLPGFRHVPF-GNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTG- 276 (459)
T ss_pred CCCCCCCCCcccCC-CCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceec-
Confidence 111000 011 167888888865433334566666654455667754 677899999999999999999999976
Q ss_pred ccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh----hhcCCCChHHHHHHH
Q 011570 245 VFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM----SSFGLVSSQTQHLIA 319 (483)
Q Consensus 245 ~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~----~~~~~~s~~~q~~~~ 319 (483)
|+....+.....+.- .+| ++ +++|.+| .| +.+|.+++. +++.+.+... ...+..++++.+++.
T Consensus 277 -~GRtG~~~a~e~~gv-----~PD--iv--t~gK~lg-gG~~Pigav~~~-~~i~~~~~~~~~~~~~T~~gnp~~~Aaal 344 (459)
T PRK11522 277 -MGRTGKMFACEHENV-----QPD--IL--CLAKALG-GGVMPIGATIAT-EEVFSVLFDNPFLHTTTFGGNPLACAAAL 344 (459)
T ss_pred -CCccchhhhhhccCC-----CCC--EE--Eechhhh-CCCccceeEEEc-HHHHHHhccCCcccCCCCCCCHHHHHHHH
Confidence 332122212211110 223 33 8899998 78 699999984 5555543211 111223666655554
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC----C-ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcC
Q 011570 320 TMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV----G-IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVK 394 (483)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----g-i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~g 394 (483)
+.|+--. + +...+++++.-+++.+.|+++ + +......-|.++.+.+... .....+...+++ +|
T Consensus 345 a~L~~i~---~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~------~~~~~i~~~l~~-~G 412 (459)
T PRK11522 345 ATINVLL---E--QNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN------EIGYNFASEMFR-QR 412 (459)
T ss_pred HHHHHHh---c--chHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc------hHHHHHHHHHHH-CC
Confidence 4443211 0 112233334444455544443 2 1111223467888887642 112356677775 69
Q ss_pred eEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 395 LNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 395 V~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
|.+.+.. .....+|+..+. ++++++++++++|.+++++..+
T Consensus 413 vl~~~~~----~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 413 VLVAGTL----NNAKTIRIEPPLTLTIEQCEQVLKAARKALAAMRV 454 (459)
T ss_pred eEEEecC----CCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHH
Confidence 9987542 134689999976 5999999999999999977653
No 296
>PRK15029 arginine decarboxylase; Provisional
Probab=99.63 E-value=1.4e-13 Score=146.87 Aligned_cols=178 Identities=15% Similarity=0.172 Sum_probs=128.1
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS 175 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~ 175 (483)
..+..+..|+.++ .....+++||+|.++.+++.+++.+||+|+++..||-+....+... |++.+.++..-
T Consensus 207 I~eAq~~aA~~fg---------A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~-ga~Pvyl~P~~ 276 (755)
T PRK15029 207 FGESEKYAARVFG---------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILT-GAKPVYMVPSR 276 (755)
T ss_pred HHHHHHHHHHHhC---------CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHc-CCeEEEecccc
Confidence 4566666666665 4567999999999999999999999999999999999999988875 99999886432
Q ss_pred CCCc----ccC-----HHHHHHHHHHHHh----cCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccc
Q 011570 176 SNDF----KVT-----MEALEAAYEKAQE----SNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYA 242 (483)
Q Consensus 176 ~~~~----~~d-----~~~l~~~i~~~~~----~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~ 242 (483)
..+ .++ ++.++++++++.. .+++++++++++|+. -|.+.+ +++|++.|+++++.|++||||+
T Consensus 277 -~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhG 351 (755)
T PRK15029 277 -NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLHFDEAWY 351 (755)
T ss_pred -cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEEEECccc
Confidence 122 233 8899999976421 223556999999987 699988 8888999999999999999997
Q ss_pred cCc-cCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEE-EEEe
Q 011570 243 ATV-FTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVG-IIYS 292 (483)
Q Consensus 243 ~~~-~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG-~li~ 292 (483)
... |. +.++....+...........++++.|.+|++ +++.-| ++..
T Consensus 352 ah~~F~--~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv 399 (755)
T PRK15029 352 GYARFN--PIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHV 399 (755)
T ss_pred cccccC--ccccccccccccccccCCCceEEEEchhhcc--cchhhhhhhee
Confidence 652 22 2222111110000000112348899999997 677777 5555
No 297
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.63 E-value=4.5e-13 Score=132.73 Aligned_cols=351 Identities=16% Similarity=0.203 Sum_probs=217.7
Q ss_pred Ccccccchhhhh-cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEe
Q 011570 47 GVIQMGLAENLL-CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMS 125 (483)
Q Consensus 47 ~~i~l~~~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it 125 (483)
-+|||=+..-.- +.+...+++... --.|...+....|.+.+++.++ .+.+++|
T Consensus 42 V~IDLrSDTgT~apS~~m~aAM~~G----------------DD~Y~gdpSv~~Lee~vael~G----------~E~alpt 95 (467)
T TIGR02617 42 VFIDLLTDSGTGAVTQSMQAAMMRG----------------DEAYSGSRSYYALAESVKNIFG----------YQYTIPT 95 (467)
T ss_pred eEEECccCCCCCCCCHHHHHHHHcC----------------CcccccCchHHHHHHHHHHHhC----------CceEEEC
Confidence 356777665442 444455555431 1247777778999999999987 3467888
Q ss_pred CChhHHHHHHHHHhcC-CCCeEEEeCC-------C-CcChHHHHhhhcCcEEEEeecC--------CCCCcccCHHHHHH
Q 011570 126 GGATGAHETVAFCLAD-PGDAFLVPTP-------Y-YPGFDRDLRWRTGVQLVPVVCD--------SSNDFKVTMEALEA 188 (483)
Q Consensus 126 ~G~~~al~~~~~~l~~-~gd~Vlv~~P-------~-y~~~~~~~~~~~G~~~~~v~~~--------~~~~~~~d~~~l~~ 188 (483)
..+..+-.+++..+++ |||.+++..+ . |......+.. .|+.++.++.+ ...+..+|++.|++
T Consensus 96 hqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l-~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~ 174 (467)
T TIGR02617 96 HQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQI-NGCTARNVYTKEAFDTGVRYDFKGNFDLEGLER 174 (467)
T ss_pred CCCchHHHHHHHhhcccccccccccccccccceEEEEecchHHHHH-cCceeecccchhhcccccCCCCCCCcCHHHHHH
Confidence 8889999999999998 7887776554 1 2212233444 48888776432 12234789999999
Q ss_pred HHHHHHhcCCceeEEEEeCCCC-CCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC-c-cC--CC--CCcchHHHhhhh
Q 011570 189 AYEKAQESNIRIKGVLITNPSN-PLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT-V-FT--KE--SSFVSIAEIIDQ 261 (483)
Q Consensus 189 ~i~~~~~~~~~~~~i~l~~P~N-PtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~-~-~~--~~--~~~~s~~~l~~~ 261 (483)
+|++...+ ++..+..+--+| --|+++|.+.++++.++|++||+.++.|.+-... . |- .+ ..-.++..+..+
T Consensus 175 ~I~~~g~~--~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE 252 (467)
T TIGR02617 175 GIEEVGPN--NVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRE 252 (467)
T ss_pred HHhhcCCC--CceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHH
Confidence 99863211 222222221123 3588999999999999999999999999876321 1 10 00 111455555422
Q ss_pred ccccCCCeEEEEecCccccCCC-CceEEEEEecChHHH---HHHHH-------hhhcCCCChHHHHHHHHhcCChhHHHH
Q 011570 262 DIACNRNLIHIVYSLSKDMGFP-GFRVGIIYSYNDQVV---SCARK-------MSSFGLVSSQTQHLIATMLSDDQFVEK 330 (483)
Q Consensus 262 ~~~~~~~~vi~~~S~SK~~g~~-GlRiG~li~~~~~l~---~~~~~-------~~~~~~~s~~~q~~~~~~l~~~~~~~~ 330 (483)
+-. ..| .+.-|+||.+|+| | |+++++++.+. +..+. +.+++..+.-...+++.-|.+. .-.+
T Consensus 253 ~~~-~aD--svt~slsKglgApvG---g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~-~~~~ 325 (467)
T TIGR02617 253 TYK-YAD--MLAMSAKKDAMVPMG---GLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDG-MNLD 325 (467)
T ss_pred hhc-cCC--EEEEEcCCCCCCccc---ceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhc-ccHH
Confidence 200 123 3345999998866 4 57777666333 33322 2233455555555665445442 1133
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCch---hhccChHHHHHHHHHHHHhcCeE-eeCCCCCCCC
Q 011570 331 FIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHL---LKEQTYEAEMALWRVIINEVKLN-VSPGSSFHCP 406 (483)
Q Consensus 331 ~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~---~~~~~~~~~~~~~~~Ll~~~gV~-v~pg~~f~~~ 406 (483)
++..+. ...++|.+.|.+.|+++.. .||-=++++.... +....+.. ..++..|..+.||. +--|+.....
T Consensus 326 yl~~ri----~qv~yl~~~L~~~Gvpi~~-~Gghav~iDa~~~lphip~~~fpa-~al~~~ly~~~GiR~~e~G~~~~~r 399 (467)
T TIGR02617 326 WLAYRI----NQVQYLVNGLEEIGVVCQQ-AGGHAAFVDAGKLLPHIPADQFPA-HALACELYKVAGIRAVEIGSLLLGR 399 (467)
T ss_pred HHHHHH----HHHHHHHHHHHhCCCcEEe-cCccEEEEehhhhCCCCChhhCcH-HHHHHHHHHHcCcceEeecceeccc
Confidence 444443 3347888999999999988 7777777765432 22233333 37788888899985 4445432111
Q ss_pred C----------CCEEEEEecc--CCHHHHHHHHHHHHHHHHHhhh
Q 011570 407 N----------PGWFRVCFAN--MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 407 ~----------~~~iRis~~~--~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
. -..+|+++.. .|.++++...++|..+.++...
T Consensus 400 d~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~~~~ 444 (467)
T TIGR02617 400 DPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAPN 444 (467)
T ss_pred CCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhhhhh
Confidence 0 1359999965 3999999999999987766543
No 298
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.63 E-value=1.4e-13 Score=137.05 Aligned_cols=285 Identities=14% Similarity=0.130 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHhhhCCCCCc-CCCcEEEeCC-hhHHHHHHHHHhcCCCCeEEEeCCCCcC--hHHHHhhhcCcEEEEeec
Q 011570 98 EFRNAVAKFMGKVRGNRITF-DPDRIVMSGG-ATGAHETVAFCLADPGDAFLVPTPYYPG--FDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~-~~~~i~it~G-~~~al~~~~~~l~~~gd~Vlv~~P~y~~--~~~~~~~~~G~~~~~v~~ 173 (483)
++-+.+.+.+...++ . +..+|+++.| +|.+++.++..++.+||++++...+..+ +...++.. |. +..+..
T Consensus 37 ~~~~~~~~~l~~l~~----~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r~~~~a~~~-g~-~~~~~~ 110 (349)
T TIGR01364 37 AVANEAESDLRELLN----IPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKKAAKEAKKY-GV-VNVVAS 110 (349)
T ss_pred HHHHHHHHHHHHHhC----CCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHh-CC-cEEEec
Confidence 444444444444443 2 2356888877 9999999999999999998888766533 23445554 88 666665
Q ss_pred CCCCCc--ccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 174 DSSNDF--KVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 174 ~~~~~~--~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
++..+| .++++.++. .+++++|.+++-.|.||...+ ++++.+++++++|.+.+ ++. .+
T Consensus 111 ~~~~~~~~~~~~~~~~~--------~~~~~~v~~th~ETstGv~~~--------~l~~~~~~l~iVDavss---~g~-~~ 170 (349)
T TIGR01364 111 GKEGNYTKIPDPSTWEI--------SEDAAYVHYCANETIHGVEFR--------ELPDVKNAPLVADMSSN---ILS-RP 170 (349)
T ss_pred cccCCCCCCCCHHhcCC--------CCCCCEEEEcCCCCcccEecc--------eecccCCCeEEEEcccc---ccC-cc
Confidence 432222 345555442 137899999999999999875 45556799999999986 333 22
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHH---------HH----hhhcCCCChHHHHHH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCA---------RK----MSSFGLVSSQTQHLI 318 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~---------~~----~~~~~~~s~~~q~~~ 318 (483)
..+..+ + +++.|..|.+|.+| +|+++.+++.+.... .. ...+++.+.....++
T Consensus 171 -id~~~~---------d--~~~~ssqK~lgP~G--lg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al 236 (349)
T TIGR01364 171 -IDVSKF---------G--LIYAGAQKNIGPAG--LTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVS 236 (349)
T ss_pred -CCHHHc---------c--EEEEecccccCCCc--eEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHH
Confidence 333322 3 77889999999777 788888544432210 00 111233344444444
Q ss_pred HHhcCChhHHHHH--HHHHHHHHHHHHHHHHHhhhcC-Cceeec--C--CceEEEeeecCchhhccChHHHHHHHHHHHH
Q 011570 319 ATMLSDDQFVEKF--IAESAKRIAERHKAFTWGLSQV-GIGCLK--S--NAGLFLWMDLHHLLKEQTYEAEMALWRVIIN 391 (483)
Q Consensus 319 ~~~l~~~~~~~~~--~~~~~~~l~~~~~~l~~~L~~~-gi~~~~--~--~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~ 391 (483)
.++|+ ++.+. ++...++.++..+++.+.|+++ |+.... + ..+..+.+.++.. .+ ..++...+ .
T Consensus 237 ~~al~---~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~----~~--~~~~~~~~-~ 306 (349)
T TIGR01364 237 GLVFK---WLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE----EL--EKRFLKEA-E 306 (349)
T ss_pred HHHHH---HHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh----hH--hHHHHHHH-H
Confidence 44443 22222 5677777888889999999998 563331 1 2223455566532 11 12444444 4
Q ss_pred hcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 392 EVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 392 ~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
+.|+.+.+|.. ..+.+|+|+.. .+.++++.++++|++++++
T Consensus 307 ~~Gi~~~~~~~----~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 307 ERGLVSLKGHR----SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred HCCCcccCCcc----ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 57998777754 23689999966 5999999999999987765
No 299
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.63 E-value=4.6e-15 Score=147.76 Aligned_cols=178 Identities=22% Similarity=0.312 Sum_probs=123.6
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS 175 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~ 175 (483)
..+..+..|+.++ .....+++||+|.++.+++.++++|||.|+++..||-+....+... |+++++++..
T Consensus 68 I~eAe~~aA~~fG---------Ad~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~-ga~Pvyi~p~- 136 (417)
T PF01276_consen 68 IKEAEELAARAFG---------ADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILS-GAIPVYIPPE- 136 (417)
T ss_dssp HHHHHHHHHHHHT---------ESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHH-TEEEEEEEEE-
T ss_pred HHHHHHHHHHhcC---------CCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHc-CCeEEEecCC-
Confidence 5677777777776 3457899999999999999999999999999999999999988886 9999988865
Q ss_pred CCCc----ccCH-----HHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc-
Q 011570 176 SNDF----KVTM-----EALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV- 245 (483)
Q Consensus 176 ~~~~----~~d~-----~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~- 245 (483)
...+ .+++ +.++++|++.... +.+++|++++|+. -|.+++ +++|+++|+++++.|++||||+...
T Consensus 137 ~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~-k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~ 211 (417)
T PF01276_consen 137 DNEYGIIGGISPDEFNEEDIEEALKEHPDA-KAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAHGAHFG 211 (417)
T ss_dssp E-TTS-BEEB-GGGGSHHHHHHHHHHCTTC-HCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT-TTGG
T ss_pred ccccCCccCCChhhhhHHHHHHHHHhCccc-cCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEcccccccc
Confidence 2222 3455 8999998874221 1145599999987 699988 8999999999999999999997652
Q ss_pred cCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEE-EEEecCh
Q 011570 246 FTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVG-IIYSYND 295 (483)
Q Consensus 246 ~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG-~li~~~~ 295 (483)
|.. -+.+...+..+ ......++++.|.+|++ +++.-+ ++....+
T Consensus 212 F~~--lp~~a~~~gad--~~~~~~~~vvqS~HKtL--~altQts~lh~~~~ 256 (417)
T PF01276_consen 212 FHP--LPRSALALGAD--RPNDPGIIVVQSTHKTL--PALTQTSMLHVKGD 256 (417)
T ss_dssp CSG--GGTTCSSTTSS---CTSBEEEEEEEHHHHS--SS-TT-EEEEEETC
T ss_pred CCC--CccchhhccCc--cccccceeeeechhhcc--cccccceEEEecCC
Confidence 221 11111111110 11334678999999997 666655 6666444
No 300
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.63 E-value=5e-14 Score=141.09 Aligned_cols=281 Identities=14% Similarity=0.172 Sum_probs=174.0
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCC-hhHHHHHHHHHhcC---CCCeEEEeCCCCcChHHHHhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGG-ATGAHETVAFCLAD---PGDAFLVPTPYYPGFDRDLRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G-~~~al~~~~~~l~~---~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v 171 (483)
+.+.|+.++++++. -++++|++|+| +|++++.++..++. +||.|++ .|........++.. |.++..+
T Consensus 46 ~~~~r~~l~~l~~~-------~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~-g~~~~~~~~~a~~~-g~~~~~~ 116 (355)
T cd00611 46 VNEAESDLRELLNI-------PDNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVT-GAWSAKAAKEAKRY-GGVVVIV 116 (355)
T ss_pred HHHHHHHHHHHhCC-------CCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEEC-CHHHHHHHHHHHhc-CCCcEEE
Confidence 45778888888761 14678999988 99999999999987 5555544 22222222245654 9888888
Q ss_pred ecCCCCCcccC-HHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCC
Q 011570 172 VCDSSNDFKVT-MEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKES 250 (483)
Q Consensus 172 ~~~~~~~~~~d-~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~ 250 (483)
+.++++++. + ++..+..+. +++++|.+++-+|.||..++ ++++.+|+++++|.+.. ++. .
T Consensus 117 ~~~~~g~~~-~~~~~~~~~~~------~~~~lV~~~h~~t~tG~~~~--------~i~~~~g~~~~VDa~qs---~g~-~ 177 (355)
T cd00611 117 AAKEEGKYT-KIPDVETWDLA------PDAAYVHYCSNETIHGVEFD--------EVPDTGGVPLVADMSSN---ILS-R 177 (355)
T ss_pred ecccccCCC-CCCCHhhcCCC------CCCCEEEEeCCcccccEEcc--------eecccCCCeEEEEcccc---ccC-C
Confidence 876443331 2 222222222 47899999999999999754 23345899999999986 333 2
Q ss_pred CcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH--------h------hhcCCCChHHHH
Q 011570 251 SFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK--------M------SSFGLVSSQTQH 316 (483)
Q Consensus 251 ~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~--------~------~~~~~~s~~~q~ 316 (483)
+ .++..+ + +.+.|..|.+|.+| +|+++++++.+.+ +.. . ..+++.+.....
T Consensus 178 ~-idv~~~---------~--~~~ss~~K~lGP~G--~g~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~ 242 (355)
T cd00611 178 P-IDVSKF---------G--VIYAGAQKNLGPAG--VTVVIVRKDLLGK-ARKITPSMLNYKTHADNNSLYNTPPTFAIY 242 (355)
T ss_pred C-CCHHHh---------C--EEEeecccccCCCc--eEEEEECHHHHhh-cccCCCCcccHHHHHhcCCCCCCChHHHHH
Confidence 2 343332 3 34566899999777 7888885443322 111 0 012333333444
Q ss_pred HHHHhcCChhHHHHH--HHHHHHHHHHHHHHHHHhhhcC-Cce-ee-c--CCceEEEeeecCchhhccChHHHHHHHHHH
Q 011570 317 LIATMLSDDQFVEKF--IAESAKRIAERHKAFTWGLSQV-GIG-CL-K--SNAGLFLWMDLHHLLKEQTYEAEMALWRVI 389 (483)
Q Consensus 317 ~~~~~l~~~~~~~~~--~~~~~~~l~~~~~~l~~~L~~~-gi~-~~-~--~~~g~f~~~~l~~~~~~~~~~~~~~~~~~L 389 (483)
++.++++ ++.+. ++...++.++..+++.+.|+++ |+. .. . ...+..+.+.++.. ....++...+
T Consensus 243 ~L~aal~---~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~------~l~~~~~~~~ 313 (355)
T cd00611 243 MMGLVLK---WLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKE------ELEKEFLKEA 313 (355)
T ss_pred HHHHHHH---HHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCCh------hhhHHHHHHH
Confidence 4444443 23322 5666777888889999999988 752 21 1 12323455566542 0011333333
Q ss_pred HHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHH
Q 011570 390 INEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSF 433 (483)
Q Consensus 390 l~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~ 433 (483)
.+.|+.+.+|.. ..+.+|+|+.. .+.++++.+++.|+++
T Consensus 314 -~r~G~~~~~~~~----~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 314 -EAAGMIGLKGHR----SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred -HHCCCcccCCCc----ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 356997665543 23689999976 5999999999999874
No 301
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.63 E-value=5.6e-13 Score=130.16 Aligned_cols=177 Identities=18% Similarity=0.191 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh---cCcEEEEeec
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR---TGVQLVPVVC 173 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~---~G~~~~~v~~ 173 (483)
..|.+.+++..+ ..++++++++..|+..++..|+.+|++|++...+|.+....++.. +|++...+.+
T Consensus 80 ~~le~~iaal~g----------a~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~ 149 (409)
T KOG0053|consen 80 DVLESGIAALEG----------AAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV 149 (409)
T ss_pred HHHHHHHHHHhC----------CceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech
Confidence 455555555543 456888999999999999999999999999999999877765543 4777777664
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcc
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFV 253 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~ 253 (483)
+ +++.+++++.+ ++++|++.+|.||+..+.+ +++|.++|+++|++||+|+.++...+..
T Consensus 150 ~-------~~~~~~~~i~~------~t~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~~----- 208 (409)
T KOG0053|consen 150 D-------DLKKILKAIKE------NTKAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQD----- 208 (409)
T ss_pred h-------hHHHHHHhhcc------CceEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCcccccC-----
Confidence 3 56777777764 7999999999999999998 7788888889999999999987642222
Q ss_pred hHHHhhhhccccCCCeEEEEecCccccCCC-CceEEEEEecChHHHHHHHHhhh-c-CCCChHH
Q 011570 254 SIAEIIDQDIACNRNLIHIVYSLSKDMGFP-GFRVGIIYSYNDQVVSCARKMSS-F-GLVSSQT 314 (483)
Q Consensus 254 s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~-GlRiG~li~~~~~l~~~~~~~~~-~-~~~s~~~ 314 (483)
...+ +..|++.|.+|.+|-. -+=.|.++....++...+..... . +..+++.
T Consensus 209 -pL~l---------GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~ 262 (409)
T KOG0053|consen 209 -PLPL---------GADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFD 262 (409)
T ss_pred -hhhc---------CCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHH
Confidence 2222 4558899999998632 24456777754666555544332 2 3345443
No 302
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=2e-12 Score=133.10 Aligned_cols=315 Identities=10% Similarity=0.048 Sum_probs=173.9
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCc---------
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGV--------- 166 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~--------- 166 (483)
+....+|+.+.+..+ ...+.+++++++++|+..++.... ....+|+....+|.+.........|.
T Consensus 96 ~~~~~lae~L~~~~p----~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 171 (457)
T PRK05639 96 ERAIRVAEKLAEISP----IENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFS 171 (457)
T ss_pred HHHHHHHHHHHhhCC----CCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCC
Confidence 344455555554321 223689999999999999887642 23357888888887754332221121
Q ss_pred ----EEEEeecCCCC--Ccc----cCHHH--------HHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHHHHH
Q 011570 167 ----QLVPVVCDSSN--DFK----VTMEA--------LEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDIVSF 227 (483)
Q Consensus 167 ----~~~~v~~~~~~--~~~----~d~~~--------l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~~~ 227 (483)
.++.+|.+... .|. -+.+. +++.+......+.++.+|++.-.....|.+ .+.+.+++|.++
T Consensus 172 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~l 251 (457)
T PRK05639 172 PLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKL 251 (457)
T ss_pred CCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 12333332110 010 02222 333322111112467666665445556774 468889999999
Q ss_pred HhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh-hh
Q 011570 228 INEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM-SS 306 (483)
Q Consensus 228 a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~-~~ 306 (483)
|++||+++|.||++.+ |+....+.....+.- .+| ++ +|+|.+| .|+.+|.+++ .+.+.+..... ..
T Consensus 252 c~~~g~llI~DEv~tG--~GrtG~~~a~~~~gv-----~PD--iv--~~gK~l~-gG~pi~av~~-~~~i~~~~~~~~~~ 318 (457)
T PRK05639 252 LDEHGILLVMDEVQTG--IGRTGKWFASEWFEV-----KPD--LI--IFGKGVA-SGMGLSGVIG-RKELMDLTSGSALL 318 (457)
T ss_pred HHHcCCEEEEechhhc--cCcCchHHHHHhcCC-----CCC--EE--Eechhhc-CCCcceeEEe-hHHHHhhcCCCccc
Confidence 9999999999999986 432122112111111 223 33 3799998 8999999999 45555532111 11
Q ss_pred cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc----CCceeecCCceEEEeeecCchhhccChHHH
Q 011570 307 FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ----VGIGCLKSNAGLFLWMDLHHLLKEQTYEAE 382 (483)
Q Consensus 307 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~ 382 (483)
....++++.+++.+.|+--. + +...+..++.-++|.+.|++ .++......-|+++.+.+............
T Consensus 319 T~~g~p~~~aaa~a~l~~l~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~ 393 (457)
T PRK05639 319 TPAANPVISAAAEATLEIIE--E---ENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELT 393 (457)
T ss_pred CCCcCHHHHHHHHHHHHHHH--H---ccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHH
Confidence 12245555555444443211 0 11122223333444444443 343333344467777776321111111122
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 383 MALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 383 ~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
..+...+++ +||.+.+.. ...+.+|+.... ++++++++++++|.+++++..+
T Consensus 394 ~~~~~~~~~-~Gv~~~~~g----~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~~ 446 (457)
T PRK05639 394 GKICWRAFE-LGLILPSYG----MFGNVIRITPPLVITKEIAEKGLEIMERAIKDALA 446 (457)
T ss_pred HHHHHHHHh-CCeEEeecC----CCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 356666664 699987642 124689999977 5999999999999999987644
No 303
>PRK07678 aminotransferase; Validated
Probab=99.60 E-value=2.4e-12 Score=132.57 Aligned_cols=314 Identities=11% Similarity=0.049 Sum_probs=172.4
Q ss_pred HHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-------CCC-CeEEEeCCCCcChHHHHhhhcCc----
Q 011570 99 FRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-------DPG-DAFLVPTPYYPGFDRDLRWRTGV---- 166 (483)
Q Consensus 99 Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-------~~g-d~Vlv~~P~y~~~~~~~~~~~G~---- 166 (483)
....+|+.+.+..+ ..+.+++++++++++..++.... .+| .+|+....+|.+.........|.
T Consensus 90 ~~~~lae~l~~~~~-----~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~ 164 (451)
T PRK07678 90 PAIKLAEKLNEWLG-----GEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRK 164 (451)
T ss_pred HHHHHHHHHHHhCC-----CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccc
Confidence 34455555554322 23589999999999998886642 123 57888888887754433221121
Q ss_pred --------EEEEeecCCCCC--cc-----cC---HHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHHHHH
Q 011570 167 --------QLVPVVCDSSND--FK-----VT---MEALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDIVSF 227 (483)
Q Consensus 167 --------~~~~v~~~~~~~--~~-----~d---~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~~~ 227 (483)
.+..+|.++... |. -+ ++.+++.+.. ....++.+|++.....-.|.+ .+.+.++++.++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~l 242 (451)
T PRK07678 165 YKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTW--ELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEI 242 (451)
T ss_pred cccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHh--cCCCceEEEEEccccCCCCcccCCHHHHHHHHHH
Confidence 112222111000 10 01 1224444532 112356666665444445665 477789999999
Q ss_pred HhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh--
Q 011570 228 INEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM-- 304 (483)
Q Consensus 228 a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~-- 304 (483)
|++||+++|.||+..++...+ . +.....+.- .+| ++ +++|.+| .| +.+|.+++ .+++.+.+...
T Consensus 243 c~~~g~llI~DEV~tGfGRtG-~-~~~~~~~gv-----~PD--iv--t~gK~lg-gG~~Pi~av~~-~~~i~~~~~~~~~ 309 (451)
T PRK07678 243 CQKHGALLISDEVICGFGRTG-K-AFGFMNYGV-----KPD--II--TMAKGIT-SAYLPLSATAV-KKEIYEAFKGKGE 309 (451)
T ss_pred HHHcCCEEEEeehhhcCCcCc-h-hHHHHhcCC-----CCC--EE--Eeecccc-cCCcceeEEEE-cHHHHHHHhccCc
Confidence 999999999999997743332 2 222222211 223 33 7799998 77 79999999 56666655321
Q ss_pred ------hhcCCCChHHHHHHHHhcCC---hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhh
Q 011570 305 ------SSFGLVSSQTQHLIATMLSD---DQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLK 375 (483)
Q Consensus 305 ------~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~ 375 (483)
...+..++++.+++.+.|+- ++. .++..+.-+.+ ++.+.+.+.++++......-|.++.+.+.....
T Consensus 310 ~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~-~~~~~~~g~~l---~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~ 385 (451)
T PRK07678 310 YEHFRHVNTFGGNPAACALALKNLEIMENENL-IERSAQLGELL---LEQLKEELGEHPLVGDIRGKGLLVGIELVNDKE 385 (451)
T ss_pred ccccccCCCCCcCHHHHHHHHHHHHHHHhCCH-HHHHHHHHHHH---HHHHHHHHhcCCCEEEEEeeceEEEEEEecCCc
Confidence 11123466666665555532 221 11122221222 222333334445433333445666677642111
Q ss_pred cc---ChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 376 EQ---TYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 376 ~~---~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
.. .......+...+++ +||.+.+.....+...+.+||+... ++++++++++++|.+++++.
T Consensus 386 ~~~~~~~~~a~~i~~~l~~-~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 386 TKEPADNDKVASVVAACKE-KGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred ccCcCchHHHHHHHHHHHH-CCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 00 01112356666664 6999876321111223679999875 59999999999999998754
No 304
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.59 E-value=1.9e-13 Score=137.38 Aligned_cols=284 Identities=19% Similarity=0.254 Sum_probs=175.7
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCD 174 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~ 174 (483)
..++.++++++++ ..+++.+++++.||.+++.++ +++||+|+++.-+|......+... |.+++.++++
T Consensus 27 ~~~fE~~~a~~~g----------~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~-G~~pv~~Di~ 95 (363)
T PF01041_consen 27 VEEFEKEFAEYFG----------VKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWA-GAEPVFVDID 95 (363)
T ss_dssp HHHHHHHHHHHHT----------SSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHT-T-EEEEE-BE
T ss_pred HHHHHHHHHHHhC----------CCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHh-ccEEEEEecc
Confidence 5788999999876 578999999999999999997 478999999999999999998886 9999999998
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcch
Q 011570 175 SSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVS 254 (483)
Q Consensus 175 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s 254 (483)
+ .++.+|++.+++++.+ ++|+|++++. -|...+ +.+|.++|+++|++||+|.+++....-. .. .
T Consensus 96 ~-~~~~id~~~~~~~i~~------~t~ai~~~h~---~G~~~d---~~~i~~~~~~~~i~lIeD~a~a~g~~~~-g~--~ 159 (363)
T PF01041_consen 96 P-ETLNIDPEALEKAITP------KTKAILVVHL---FGNPAD---MDAIRAIARKHGIPLIEDAAQAFGARYK-GR--P 159 (363)
T ss_dssp T-TTSSB-HHHHHHHHHT------TEEEEEEE-G---GGB------HHHHHHHHHHTT-EEEEE-TTTTT-EET-TE--E
T ss_pred C-CcCCcCHHHHHHHhcc------CccEEEEecC---CCCccc---HHHHHHHHHHcCCcEEEccccccCceeC-CE--e
Confidence 5 4789999999999985 8899998765 344444 8999999999999999999997532111 11 1
Q ss_pred HHHhhhhccccCCCeEEEEecC--ccccCCCCceEEEEEecChHHHHHHHHhhhcCC-------------------CChH
Q 011570 255 IAEIIDQDIACNRNLIHIVYSL--SKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGL-------------------VSSQ 313 (483)
Q Consensus 255 ~~~l~~~~~~~~~~~vi~~~S~--SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~-------------------~s~~ 313 (483)
+- ... .+.+.|| +|.+... --|.++++++.+.+.++.++..+. ++.
T Consensus 160 ~G---------~~g-d~~~fSf~~~K~i~~g--eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~- 226 (363)
T PF01041_consen 160 VG---------SFG-DIAIFSFHPTKIITTG--EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSE- 226 (363)
T ss_dssp TT---------SSS-SEEEEESSTTSSS-SS--S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BH-
T ss_pred cc---------CCC-CceEecCCCCCCCcCC--CCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHH-
Confidence 11 112 3456677 6887422 358999988888888776544321 121
Q ss_pred HHHHHH-HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceeec--CCc---eE-EEeeecCchhhccChHHHHHH
Q 011570 314 TQHLIA-TMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLK--SNA---GL-FLWMDLHHLLKEQTYEAEMAL 385 (483)
Q Consensus 314 ~q~~~~-~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~--~~~---g~-f~~~~l~~~~~~~~~~~~~~~ 385 (483)
.|+++. .-|.. +++..+.-+++.+++.+.|... ++...+ +.. .+ .+.+.++.... ....++
T Consensus 227 ~~AAigl~QL~~-------L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~----~~rd~l 295 (363)
T PF01041_consen 227 LQAAIGLAQLKR-------LDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEAL----ADRDEL 295 (363)
T ss_dssp HHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGC----STHHHH
T ss_pred HHHHHHHHHHHH-------hhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccc----chHHHH
Confidence 222221 21221 2333333355667777788776 443322 221 11 22333332110 112366
Q ss_pred HHHHHHhcCeEeeCCCC-CCC------C-----C----------CCEEEEEecc-CCHHHHHHHHHHHH
Q 011570 386 WRVIINEVKLNVSPGSS-FHC------P-----N----------PGWFRVCFAN-MDDRTMEIALSRIT 431 (483)
Q Consensus 386 ~~~Ll~~~gV~v~pg~~-f~~------~-----~----------~~~iRis~~~-~~~e~l~~~l~~L~ 431 (483)
.+.|.+ .||.+.+... .-. . . ...+-|-+.. .++++++..++.|+
T Consensus 296 ~~~L~~-~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 296 VEALRA-RGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp HHHHHH-TTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred HHHHHH-CCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 666665 5999887541 000 0 0 0135555533 58888888887764
No 305
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.57 E-value=2.5e-12 Score=133.67 Aligned_cols=319 Identities=13% Similarity=0.126 Sum_probs=190.4
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhCCCC--------Cc-CCCcEEEeCChhHHHHHHHHHh----cC---------------
Q 011570 90 FQDYHGLPEFRNAVAKFMGKVRGNRI--------TF-DPDRIVMSGGATGAHETVAFCL----AD--------------- 141 (483)
Q Consensus 90 Y~~~~g~~~Lr~~ia~~~~~~~g~~~--------~~-~~~~i~it~G~~~al~~~~~~l----~~--------------- 141 (483)
|...+...++.+.+.+|+.+..+..- .. +...-++|+|+|+++..++.+. +.
T Consensus 121 ~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~ 200 (522)
T TIGR03799 121 IETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFA 200 (522)
T ss_pred eecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchh
Confidence 33445578999999999988753100 00 1123577899998888776542 11
Q ss_pred -------CCCeEEEeCCCCcChHHHHhhhcCc---EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCC
Q 011570 142 -------PGDAFLVPTPYYPGFDRDLRWRTGV---QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNP 211 (483)
Q Consensus 142 -------~gd~Vlv~~P~y~~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NP 211 (483)
++..|++..-.|.+...++..+ |. +++.+|+++ ++.+|++.|+++|++..+++.++-+|+-+..++.
T Consensus 201 ~~~~~~~~~~~v~~S~~~H~S~~kaa~~l-glg~~~v~~vp~d~--~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~ 277 (522)
T TIGR03799 201 ALKHYGYDGLAILVSERGHYSLGKAADVL-GIGRDNLIAIKTDA--NNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTE 277 (522)
T ss_pred hhhhccCCceEEEECCCchHHHHHHHHHc-CCCcccEEEEEeCC--CCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcC
Confidence 2346888888899888888776 87 788999875 4689999999999876555444444444456779
Q ss_pred CcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEE
Q 011570 212 LGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIY 291 (483)
Q Consensus 212 tG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li 291 (483)
||.+-+ +++|+++|+++|+|+++|.+|+....-. . ....+...+ .....+..+.+|.++ ...-+|.++
T Consensus 278 tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~-~---~~r~~l~gl----e~aDSit~d~HK~l~-~P~g~G~ll 345 (522)
T TIGR03799 278 TGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLS-N---TYRHLLKGI----ERADSVTIDAHKQLY-VPMGAGMVL 345 (522)
T ss_pred CCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhC-H---HHHHHhcCc----hhCCEEEEChhhcCC-cCcccEEEE
Confidence 999999 8888899999999999999998543222 1 112222210 122345679999764 446689988
Q ss_pred ecChHHHHHHHHhhhc-------------CCCChH----HHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-
Q 011570 292 SYNDQVVSCARKMSSF-------------GLVSSQ----TQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV- 353 (483)
Q Consensus 292 ~~~~~l~~~~~~~~~~-------------~~~s~~----~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~- 353 (483)
..+..+.+.+.....+ ...+.. ...++...+...+ +++..++..+..+++.+.|++.
T Consensus 346 vr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G-----~~~ii~~~~~la~~l~~~L~~~~ 420 (522)
T TIGR03799 346 FKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKG-----YELLIDQSIEKAKYFADLIQQQP 420 (522)
T ss_pred EeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHhhCC
Confidence 8655544333221011 001111 1122223333222 4555666677788899989877
Q ss_pred CceeecCCceEEEeeec-Cchhhcc----------C----hH-HHHHHHHHHHHhcCeE-eeCCC----CCCCCCCCEEE
Q 011570 354 GIGCLKSNAGLFLWMDL-HHLLKEQ----------T----YE-AEMALWRVIINEVKLN-VSPGS----SFHCPNPGWFR 412 (483)
Q Consensus 354 gi~~~~~~~g~f~~~~l-~~~~~~~----------~----~~-~~~~~~~~Ll~~~gV~-v~pg~----~f~~~~~~~iR 412 (483)
++++..+..-..+.+++ |...... . .. -...+.+++.++ |.. |.+-. .+...+.-.+|
T Consensus 421 ~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~-G~~~vs~t~l~~~~~~g~~~~~lR 499 (522)
T TIGR03799 421 DFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREA-GKSFVSRTRLTPAQYDHQPTVVFR 499 (522)
T ss_pred CeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhc-CCEEEEEEEecccccCCCCcEEEE
Confidence 88877543323444554 3221100 0 00 012344444444 544 44221 12111224699
Q ss_pred EEecc--CCHHHHHHHHHH
Q 011570 413 VCFAN--MDDRTMEIALSR 429 (483)
Q Consensus 413 is~~~--~~~e~l~~~l~~ 429 (483)
+++++ +++++++.+++.
T Consensus 500 ~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 500 VVLANPLTTHEILQDILDE 518 (522)
T ss_pred EEecCCCCCHHHHHHHHHH
Confidence 99977 477888876653
No 306
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.57 E-value=5.6e-15 Score=142.33 Aligned_cols=245 Identities=20% Similarity=0.238 Sum_probs=153.4
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChH--HHHhhhcCc
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFD--RDLRWRTGV 166 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~--~~~~~~~G~ 166 (483)
.|+...-..+|++.+++.++ .+..+++.+++.+..+++++++.|++.|++..++|.... .......|.
T Consensus 24 ~Yg~D~~~~~l~~~i~~l~g----------~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~ga~~~~~G~ 93 (290)
T PF01212_consen 24 AYGEDPTTARLEERIAELFG----------KEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDETGAIEELSGA 93 (290)
T ss_dssp CTTSSHHHHHHHHHHHHHHT----------SSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSSTTHHHHHTTC
T ss_pred ccCCChhHHHHHHHHHHHcC----------CCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeeccchhhHhcCc
Confidence 47665556777777777765 356678999999999999999999999999999764222 223233599
Q ss_pred EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCC-CcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc
Q 011570 167 QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNP-LGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV 245 (483)
Q Consensus 167 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NP-tG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~ 245 (483)
++++++.++. ..+|+++|++.+.....+..++++|++++|+|- -|+++|.+++++|.++|++||+.++.|.+-....
T Consensus 94 ~~~~l~~~~~--G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a 171 (290)
T PF01212_consen 94 KLIPLPSDDD--GKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANA 171 (290)
T ss_dssp EEEEEBECTG--TBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHH
T ss_pred EEEECCCccc--CCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHh
Confidence 9999997652 479999999999886444467999999999996 3899999999999999999999999999974211
Q ss_pred cCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCC----CChHHH---HHH
Q 011570 246 FTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGL----VSSQTQ---HLI 318 (483)
Q Consensus 246 ~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~----~s~~~q---~~~ 318 (483)
.. ....++.++.. .-.++.-|++|..|+++ -+.++++++.+.+.....+..+. ...++. ...
T Consensus 172 ~~--~~~~~~~e~~~-------~~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~~~a~~~~~~ 240 (290)
T PF01212_consen 172 AA--ALGVSLAEIAA-------GADSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQRKRLGGGMRQAGVLAAAELYQF 240 (290)
T ss_dssp HC--HHHHHHHHHHT-------TSSEEEEETTSTT-SSS--EEEEEESHHHHHHHHHHHHHHTHHHHHTTHHHHHHHHHH
T ss_pred hh--cccccHHHHhh-------hCCEEEEEEEccccccc--ceEEEechHHHHHHHHHHHHhccCeeecceeeeechhhH
Confidence 11 11134444443 22244459999988776 24555543434443333222210 111111 000
Q ss_pred HHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 319 ATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
..+...+.+ .....+-.++.+.+.+.|+..|..+..+.
T Consensus 241 ~~l~~l~~~-----~~~~~~~~~~A~~La~~l~~~~~~~~~~~ 278 (290)
T PF01212_consen 241 AALRALELW-----LERARHANAMAKRLAAGLEALGGVLPRPV 278 (290)
T ss_dssp HHHCHEECS-----HHHHHCHHHHHHCHHHCHHEECEEEETTS
T ss_pred HHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHCCCcccCCC
Confidence 111111111 12233345566778888887776554433
No 307
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.56 E-value=5.4e-13 Score=133.53 Aligned_cols=268 Identities=15% Similarity=0.102 Sum_probs=169.3
Q ss_pred CcEEEe-CChhHHHHHHHHHhcCCCCeEEEeCCCCcC--hHHHHhhhcCcEEEEeecCCCCCcccCHHHHHH-HHHHHHh
Q 011570 120 DRIVMS-GGATGAHETVAFCLADPGDAFLVPTPYYPG--FDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEA-AYEKAQE 195 (483)
Q Consensus 120 ~~i~it-~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~--~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~-~i~~~~~ 195 (483)
.+|+++ ++++.++..++..++.+||++++...+..+ +.+.++.. |.. ..+..++..++ .+..++++ .++
T Consensus 67 ~~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~-g~~-~~~~~~~~~g~-~~~~~~~~~~l~---- 139 (360)
T PRK05355 67 YKVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKKAIKEAKKY-GEV-NVAASSEDDGF-TYIPPLDEWQLS---- 139 (360)
T ss_pred cEEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHh-CCc-eEEecccccCC-CCCCChhhccCC----
Confidence 456665 667788999999999999998887766433 23345554 754 45554431222 33333433 443
Q ss_pred cCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEec
Q 011570 196 SNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYS 275 (483)
Q Consensus 196 ~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S 275 (483)
+++++|.+++-.+.||...+ .+.+| +|+++|+|.+.+ ++. .+ .++..+ + +++.|
T Consensus 140 --~~~~~V~~th~eTstGv~~~--~i~~i------~g~l~vVDavss---~g~-~~-idv~~~---------d--~~~~s 193 (360)
T PRK05355 140 --DDAAYVHYTSNETIDGTEFH--ELPDT------GDVPLVADMSSD---ILS-RP-IDVSKF---------G--LIYAG 193 (360)
T ss_pred --CCCCEEEEccCCCcceEecC--ccccc------CCCcEEEEcCcc---ccC-cc-CCHHHc---------c--EEEEe
Confidence 26899999999999999984 25554 799999999986 333 22 333322 3 67889
Q ss_pred CccccCCCCceEEEEEecChHHHHHHHH-----------h---hhcCCCChHHHHHHHHhcCChhHHHH--HHHHHHHHH
Q 011570 276 LSKDMGFPGFRVGIIYSYNDQVVSCARK-----------M---SSFGLVSSQTQHLIATMLSDDQFVEK--FIAESAKRI 339 (483)
Q Consensus 276 ~SK~~g~~GlRiG~li~~~~~l~~~~~~-----------~---~~~~~~s~~~q~~~~~~l~~~~~~~~--~~~~~~~~l 339 (483)
..|.+|.+| +|+++.+++.+.+ +.. . ..+++.+.....++.++|+. +.+ -++...++.
T Consensus 194 sqK~lgP~G--lg~l~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~---i~~~gG~e~i~~r~ 267 (360)
T PRK05355 194 AQKNIGPAG--LTIVIVREDLLGR-ALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKW---LKEQGGVAAMEKRN 267 (360)
T ss_pred ccccccCCc--eEEEEECHHHHhh-cccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHH---HHHccCHHHHHHHH
Confidence 999999777 7888885444322 211 0 11233444444444444432 222 256667778
Q ss_pred HHHHHHHHHhhhcCCce-eecC---CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEe
Q 011570 340 AERHKAFTWGLSQVGIG-CLKS---NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCF 415 (483)
Q Consensus 340 ~~~~~~l~~~L~~~gi~-~~~~---~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~ 415 (483)
++..+++.+.|+++|+- ...+ ..+..+.+.++... ...++...+. ++|+.+.+|.. ..+.+|+|+
T Consensus 268 ~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~------~~~~~~~~~~-~~Gi~~~~~~~----~~g~vRiS~ 336 (360)
T PRK05355 268 QEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEE------LDKKFLAEAK-AAGLVGLKGHR----SVGGMRASI 336 (360)
T ss_pred HHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChH------HHHHHHHHHH-HCCCcccCCCC----ccCcEEEEC
Confidence 88889999999988742 2111 23234556666531 1124444444 56998866652 246899999
Q ss_pred cc-CCHHHHHHHHHHHHHHHHHh
Q 011570 416 AN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 416 ~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
.. .+.++++.+++.|+++++++
T Consensus 337 ~~~nt~eei~~l~~~l~~~~~~~ 359 (360)
T PRK05355 337 YNAMPLEGVQALVDFMKEFERRH 359 (360)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhc
Confidence 76 58999999999999987754
No 308
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.56 E-value=1.3e-12 Score=138.19 Aligned_cols=174 Identities=17% Similarity=0.192 Sum_probs=122.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH-HhhhcCcEEEEeecC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD-LRWRTGVQLVPVVCD 174 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~-~~~~~G~~~~~v~~~ 174 (483)
..+..+..|+.++ .....+++||+|.++.+++.+++.+||.||++..||-+.... +.+. |++.+.+...
T Consensus 176 i~eAq~~AA~~fg---------Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLs-Ga~PVYl~P~ 245 (720)
T PRK13578 176 AKDAQKHAAKVFN---------ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQA-GATPVYLETA 245 (720)
T ss_pred HHHHHHHHHHHhC---------CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHc-CCeEEEeecc
Confidence 4566666666665 345789999999999999999999999999999999998875 6664 9999988754
Q ss_pred CCCCcc----cCH-----HHHHHHHHHHHhc----CCceeEEEEeCCCCCCcCCCCHHHHHHHHHH-HhhcCcEEEEccc
Q 011570 175 SSNDFK----VTM-----EALEAAYEKAQES----NIRIKGVLITNPSNPLGTFLDRETLKDIVSF-INEKNIHLVCDEI 240 (483)
Q Consensus 175 ~~~~~~----~d~-----~~l~~~i~~~~~~----~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~-a~~~~~~iI~Dea 240 (483)
- +.|+ ++. +.++++|++...+ .+..+++++++|+. -|.+++ +++|++. ++.++ .|++|||
T Consensus 246 ~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~llvDEA 319 (720)
T PRK13578 246 R-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YILFDSA 319 (720)
T ss_pred c-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cEEEeCc
Confidence 3 2233 354 4488888764111 12258999999987 699998 7777777 56777 9999999
Q ss_pred cccCc-cCCC-CCcc-hHHHhhhhccccCCCeEEEEecCccccCCCCceEE-EEEe
Q 011570 241 YAATV-FTKE-SSFV-SIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVG-IIYS 292 (483)
Q Consensus 241 y~~~~-~~~~-~~~~-s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG-~li~ 292 (483)
|+... |... +.++ +...+.. +...++++.|.+|.+ +++--+ ++..
T Consensus 320 hgah~~F~p~~~~~p~~al~~Ga-----D~p~i~v~QStHKtL--~alTQaS~LHv 368 (720)
T PRK13578 320 WVGYEQFIPMMADCSPLLLELNE-----NDPGIFVTQSVHKQQ--AGFSQTSQIHK 368 (720)
T ss_pred chhhhccCcccccCChhhhhcCC-----CCCCeEEEEChhhcc--hhhhhHhhhhc
Confidence 97652 3220 0121 2122221 234578899999997 666666 5555
No 309
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.56 E-value=9.8e-14 Score=134.32 Aligned_cols=299 Identities=19% Similarity=0.238 Sum_probs=199.8
Q ss_pred CCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeec
Q 011570 94 HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 94 ~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~ 173 (483)
.-+.++.+.+|+|++ .++.+++..| -......+.+|+.||.-|+-.+-.+..+...++.. |+.+..+..
T Consensus 182 ~~hkelE~l~A~f~g---------~e~a~vF~mG-f~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLS-gAtiRVfkH 250 (519)
T KOG1357|consen 182 EEHKELEELVARFLG---------VEDAIVFSMG-FATNSMNIPSLLGKGSLIISDELNHASLITGARLS-GATTRVFRH 250 (519)
T ss_pred HHHHHHHHHHHHhcC---------CcceEEEecc-ccccccCcceeecCCcceeeccccchheecccccc-CceEEEEec
Confidence 346788889999987 5778888888 33455667789999999999999999888878775 888877775
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCc-----eeEEEE--eCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCcc
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIR-----IKGVLI--TNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVF 246 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~-----~~~i~l--~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~ 246 (483)
+ |.+.||+.|++.-..++. -|-|++ -.-...-|.+.. +.+++++++++..+++.||+++....
T Consensus 251 N-------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vvalkkkykayl~lDEAHSiGA~ 320 (519)
T KOG1357|consen 251 N-------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVALKKKYKAYLYLDEAHSIGAM 320 (519)
T ss_pred C-------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHHhhccccEEEEeecccccccc
Confidence 4 678888888876554321 122333 344567777777 88899999999999999999976544
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc-----CCCChHHHHHHHHh
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF-----GLVSSQTQHLIATM 321 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~-----~~~s~~~q~~~~~~ 321 (483)
+. .......+..-. ..+..|.+++|.|.||.+| ||+.+ ++.+++.++..... ...++.+|.....+
T Consensus 321 g~--tGrgvce~~g~d---~~dvDImMGtftKSfga~G---Gyiag-sk~lid~lrt~s~~~~yat~~sppvaqq~~ssl 391 (519)
T KOG1357|consen 321 GA--TGRGVCEYFGVD---PEDVDIMMGTFTKSFGAAG---GYIAG-SKELIDYLRTPSPSALYATSLSPPVAQQILTSV 391 (519)
T ss_pred CC--CCcceeeccCCC---chhheeecceehhhccccc---ceecC-cHHHHhhhccCCCceeecccCChHHHHHHHHHH
Confidence 32 112222222100 2456788999999999887 88888 67777776554332 22334455554333
Q ss_pred ---cCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeec--CchhhccChHHHHHHHHHHHHhcCeE
Q 011570 322 ---LSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDL--HHLLKEQTYEAEMALWRVIINEVKLN 396 (483)
Q Consensus 322 ---l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l--~~~~~~~~~~~~~~~~~~Ll~~~gV~ 396 (483)
...+. ....++..+++.++..+++..|...|+.++.......+.+-+ +.. -..+.+.++++ +|.
T Consensus 392 ~~i~G~dg--t~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~~dSpVvplll~~~~k--------~~~f~r~~l~~-nig 460 (519)
T KOG1357|consen 392 KHIMGEDG--TNRGRQKIERLAENSRYFRWELQKMGFIVYGNNDSPVVPLLLYGPAK--------IVAFSREMLER-NIG 460 (519)
T ss_pred HhhcCCCc--ccHHHHHHHHHHhhhHHHHHhhhcCcEEEecCCCCCcceeeecCccc--------ccHHHHHHHhc-Cce
Confidence 22222 344677788899999999999999998888666553332222 211 11455567754 665
Q ss_pred eeCCCCCC-CCCCCEEEEEecc-CCHHHHHHHHHHHHHH
Q 011570 397 VSPGSSFH-CPNPGWFRVCFAN-MDDRTMEIALSRITSF 433 (483)
Q Consensus 397 v~pg~~f~-~~~~~~iRis~~~-~~~e~l~~~l~~L~~~ 433 (483)
+.-+.... +.-.+.+|+|.+. .+.|+++.+++.+.+.
T Consensus 461 vVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~ 499 (519)
T KOG1357|consen 461 VVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRV 499 (519)
T ss_pred EEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhh
Confidence 54332222 2234568999976 5889999888877653
No 310
>PRK04311 selenocysteine synthase; Provisional
Probab=99.56 E-value=4.3e-12 Score=129.96 Aligned_cols=295 Identities=15% Similarity=0.172 Sum_probs=175.0
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC------hHHHHhhhcCcEEEE
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPG------FDRDLRWRTGVQLVP 170 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~------~~~~~~~~~G~~~~~ 170 (483)
..+++.+|++.+ .+..+++++++.++..++.+ +.+||+|+++...+.. +...+... |++++.
T Consensus 130 ~~~e~~lA~l~G----------ae~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~-G~~l~~ 197 (464)
T PRK04311 130 RALAALLCALTG----------AEDALVVNNNAAAVLLALNA-LAAGKEVIVSRGELVEIGGAFRIPDVMRQA-GARLVE 197 (464)
T ss_pred HHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHH-hCCCCEEEEcchhhhhcCcchhhHHHHHHC-CcEEEE
Confidence 577788888765 34677788888999988866 5799999998764431 22344554 999998
Q ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCC--Cc--CCCCHHHHHHHHHHHhhcCcEEEEccccccCc-
Q 011570 171 VVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNP--LG--TFLDRETLKDIVSFINEKNIHLVCDEIYAATV- 245 (483)
Q Consensus 171 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NP--tG--~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~- 245 (483)
++.+. ..++++++++|.+ ++++|++.+++|| +| ...+ +++|+++|++||+++|+|.+.+.+.
T Consensus 198 v~~~~----~t~~~dle~aI~~------~TklV~~vh~sN~~i~G~~~~~d---l~eI~~lak~~gi~vivD~gsG~l~~ 264 (464)
T PRK04311 198 VGTTN----RTHLRDYEQAINE------NTALLLKVHTSNYRIEGFTKEVS---LAELAALGKEHGLPVVYDLGSGSLVD 264 (464)
T ss_pred ECCCC----CCCHHHHHHhcCc------cCeEEEEEcCCCccccccCCcCC---HHHHHHHHHHcCCeEEEECCCccccc
Confidence 87643 2478899998864 7899999999998 34 4556 8899999999999999999654320
Q ss_pred ---cCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH--hhhcCCCChHHHHHHHH
Q 011570 246 ---FTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK--MSSFGLVSSQTQHLIAT 320 (483)
Q Consensus 246 ---~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~--~~~~~~~s~~~q~~~~~ 320 (483)
|.- ...+.+.... ..+..+++.|.+|.+|-| ..|++++ ++.+.+.++. +.....+......++.+
T Consensus 265 ~~~~gl-~~~p~~~~~l------~~GaDiv~fSg~K~LgGp--~~G~i~g-~~~li~~l~~~~~~r~lr~dk~~l~~l~~ 334 (464)
T PRK04311 265 LSQYGL-PDEPTVQELL------AAGVDLVTFSGDKLLGGP--QAGIIVG-KKELIARLKKHPLKRALRVDKLTLAALEA 334 (464)
T ss_pred chhccC-CCCCchhhHH------hcCCcEEEecCcccccCC--ceEEEEE-cHHHHHHHhhchhHHHHhcchHHHHHHHH
Confidence 110 0112222221 235568889999998633 5899998 4555554432 11111123333333322
Q ss_pred hc----CChh-HH----HHHHHHHHHHHHHHHHHHHHhhhcC---C--ceeecC----CceEEEeeecCch---hhccCh
Q 011570 321 ML----SDDQ-FV----EKFIAESAKRIAERHKAFTWGLSQV---G--IGCLKS----NAGLFLWMDLHHL---LKEQTY 379 (483)
Q Consensus 321 ~l----~~~~-~~----~~~~~~~~~~l~~~~~~l~~~L~~~---g--i~~~~~----~~g~f~~~~l~~~---~~~~~~ 379 (483)
.+ ...+ +. .+.+....+.+.++.+.+.+.|..+ + +++.+. .||-.--..+|.. +.....
T Consensus 335 ~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~ 414 (464)
T PRK04311 335 TLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDR 414 (464)
T ss_pred HHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCC
Confidence 22 2211 10 0123333466667778888888765 2 233322 1121111111111 000000
Q ss_pred HHHHHHHHHHHHhc--CeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 380 EAEMALWRVIINEV--KLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 380 ~~~~~~~~~Ll~~~--gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
...++..+ |++. .|..+ -.++.+.+-+....+++++.++++|++++.
T Consensus 415 -~~~~l~~~-lr~~~~~i~~r-------~~~~~~~ld~r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 415 -SLEALAAR-LRLLPPPVIGR-------IEDGRLLLDLRTLEEEDEERLAAALLEALN 463 (464)
T ss_pred -CHHHHHHH-HhcCCCCEEEE-------EECCEEEEEeCcCCHHHHHHHHHHHHHHhh
Confidence 12244444 3343 34443 245678899876788999999999988754
No 311
>PRK05965 hypothetical protein; Provisional
Probab=99.55 E-value=1.1e-11 Score=127.78 Aligned_cols=307 Identities=13% Similarity=0.061 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc------C-C-CCeEEEeCCCCcChHHHHhhhcCc---
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA------D-P-GDAFLVPTPYYPGFDRDLRWRTGV--- 166 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~------~-~-gd~Vlv~~P~y~~~~~~~~~~~G~--- 166 (483)
+.+..+|+.+.+... -+.+.+++++++++++..++.... + + ..+|+....+|.+.........|.
T Consensus 90 ~~~~~lae~L~~~~p----~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~ 165 (459)
T PRK05965 90 EPAIRLAAKLAERAP----GSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAF 165 (459)
T ss_pred HHHHHHHHHHHhhCC----CCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchh
Confidence 444456666554321 234689999999999999987642 1 2 257898999987764321111111
Q ss_pred ---------EEEEeecC--CCCCcccC--------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHHHH
Q 011570 167 ---------QLVPVVCD--SSNDFKVT--------MEALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDIVS 226 (483)
Q Consensus 167 ---------~~~~v~~~--~~~~~~~d--------~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~~ 226 (483)
.+..++.+ ....+.-| ++.+++.+... ...++.+|++...+...|.+ .+.+.++++.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~ 243 (459)
T PRK05965 166 HRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL--GADNVAAFFCEPIQGSGGVIVPPKGWLKAMRE 243 (459)
T ss_pred hcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCCCCccCCHHHHHHHHH
Confidence 01122211 11111123 24566666431 11356666666546556764 57788999999
Q ss_pred HHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh-
Q 011570 227 FINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM- 304 (483)
Q Consensus 227 ~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~- 304 (483)
+|++||+++|.||+..++...+ .+.....+.- .+| |+ +++|.+| .| +.+|.+++ .+++.+.+...
T Consensus 244 lc~~~gillI~DEV~tGfGRtG--~~~a~~~~gv-----~PD--iv--~~gKgl~-gG~~Pi~av~~-~~~i~~~~~~~~ 310 (459)
T PRK05965 244 ACRELGILFVADEVITGFGRTG--PLFACEAEGV-----VPD--LM--TVAKGLT-SGYVPMGAVLM-SDHVYQGIADGA 310 (459)
T ss_pred HHHHcCCEEEEechhccCccCc--hhhhHhhcCC-----CCC--eE--Eechhhc-cCCcceeEEEE-cHHHHHHHhccc
Confidence 9999999999999998743232 2222222211 222 22 6799998 89 59999999 55565554311
Q ss_pred -------h-hcCCCChHHHHHHHHhcC---ChhHHHHHHHHHHHHHHHHHHHHHHhhhc---CCceeecCCceEEEeeec
Q 011570 305 -------S-SFGLVSSQTQHLIATMLS---DDQFVEKFIAESAKRIAERHKAFTWGLSQ---VGIGCLKSNAGLFLWMDL 370 (483)
Q Consensus 305 -------~-~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~l~~~~~~l~~~L~~---~gi~~~~~~~g~f~~~~l 370 (483)
. ..+..++++.+++.+.|+ +++. .+..++.-+++.+.|++ .++......-|+++-+++
T Consensus 311 ~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l--------~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~ 382 (459)
T PRK05965 311 GAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGL--------LANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALEL 382 (459)
T ss_pred cccccccccCCCCCCHHHHHHHHHHHHHHHhccH--------HHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEE
Confidence 1 112356666665555543 2221 22223333444444443 232222334456777777
Q ss_pred CchhhccC-----hHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 371 HHLLKEQT-----YEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 371 ~~~~~~~~-----~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
........ ......+...++ ++||++.+. +.+.+|+.... ++++++++++++|.+++++..
T Consensus 383 ~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gll~~~~------g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~ 449 (459)
T PRK05965 383 VADKATKTPFDAALDPADRIFDRAY-ANGLVFRAF------GDGVLGFAPALCCTEGEFDLIFERTRKTLDDVL 449 (459)
T ss_pred eccccccCCCCchhHHHHHHHHHHH-hCCeEEEec------CCcEEEEECCCcCCHHHHHHHHHHHHHHHHHHh
Confidence 43111000 011234555566 469998753 24579999765 599999999999999998763
No 312
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.55 E-value=1.2e-12 Score=138.22 Aligned_cols=167 Identities=13% Similarity=0.145 Sum_probs=119.0
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS 175 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~ 175 (483)
..+..+.+|+.++ .....+++||+|.++.+++.+++.+||.|+++..||-+....+... |++.+.++...
T Consensus 197 i~eAe~~AA~~fg---------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLils-ga~PVYl~P~r 266 (714)
T PRK15400 197 HKEAEEYIARVFN---------ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMS-DVTPIYFRPTR 266 (714)
T ss_pred HHHHHHHHHHHhC---------CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHc-CCeEEEecccc
Confidence 3456666666655 3457899999999999999999999999999999999988888775 99999887543
Q ss_pred CCCcc----cC-----HHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc-
Q 011570 176 SNDFK----VT-----MEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV- 245 (483)
Q Consensus 176 ~~~~~----~d-----~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~- 245 (483)
..|+ ++ .+.++++|++.... +++.++++++|+. -|.+++ ++.|++.|+.++ |++||||+...
T Consensus 267 -n~~Gi~g~I~~~~~~~e~i~~~i~~~p~a-k~p~~~vit~pTY-dG~~yd---~~~I~~~~~~~~--ilvDEAwgah~~ 338 (714)
T PRK15400 267 -NAYGILGGIPQSEFQHATIAKRVKETPNA-TWPVHAVITNSTY-DGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTN 338 (714)
T ss_pred -cccCCccCCCccccCHHHHHHHHHhCccc-cCccEEEEECCCC-ccEecC---HHHHHHHhCCCC--EEEEccchhhhc
Confidence 2332 34 78899888764321 2334799999954 799999 677777777776 78999997652
Q ss_pred cCCCCCcc--hHHHhhhhccccCCCeEEEEecCccccCCCCceEE
Q 011570 246 FTKESSFV--SIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVG 288 (483)
Q Consensus 246 ~~~~~~~~--s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG 288 (483)
|.. .+. +...... ...+.++++.|.+|.+ +|+.-+
T Consensus 339 F~p--~~~~~sam~~ga----~~~~~i~vtQStHKtL--~alTQa 375 (714)
T PRK15400 339 FSP--IYEGKCGMSGGR----VEGKVIYETQSTHKLL--AAFSQA 375 (714)
T ss_pred cCc--ccCCcChhhcCC----CCCCceEEEEchhhcc--cchhHH
Confidence 322 121 2221111 0225578899999997 666555
No 313
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.55 E-value=7.6e-12 Score=130.04 Aligned_cols=310 Identities=11% Similarity=0.076 Sum_probs=171.7
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-------CCC-CeEEEeCCCCcChHHHHhhhcCcE-
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-------DPG-DAFLVPTPYYPGFDRDLRWRTGVQ- 167 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-------~~g-d~Vlv~~P~y~~~~~~~~~~~G~~- 167 (483)
.+....+|+.+.+.+. +...+.+++++++++|+..++.... .++ ..|+..+-+|.+.........|..
T Consensus 132 ~~~~~~lae~L~~~~~---~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~ 208 (504)
T PLN02760 132 TKPSLDLAKELLEMFT---ARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPA 208 (504)
T ss_pred cHHHHHHHHHHHhhcC---CCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChh
Confidence 4555666666554321 1123579999999999999998762 123 578888888876543221111221
Q ss_pred -----------EEEeecCCCCCc-----------ccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHH
Q 011570 168 -----------LVPVVCDSSNDF-----------KVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDI 224 (483)
Q Consensus 168 -----------~~~v~~~~~~~~-----------~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i 224 (483)
+..++.+....+ ....+.|++.+... ...++.+|++.....-.|.+. +.+.+++|
T Consensus 209 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g~gG~~~p~~~yl~~l 286 (504)
T PLN02760 209 LHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKE--GPETIAAFIAEPVMGAGGVIPPPATYFEKI 286 (504)
T ss_pred hccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhc--CCCceEEEEECCccCCCCCcCCCHHHHHHH
Confidence 111121100000 00123456555321 112455555543355557654 67889999
Q ss_pred HHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHH
Q 011570 225 VSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARK 303 (483)
Q Consensus 225 ~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~ 303 (483)
.++|++||+++|.||++.++...+ . ......+.- .+| +-+|+|.+| .| +.+|.+++ ++++.+.+..
T Consensus 287 r~lc~~~g~lLI~DEV~TGfGRtG-~-~~a~e~~gv-----~PD----ivtlgK~lg-gG~~PigAv~~-~~~i~d~~~~ 353 (504)
T PLN02760 287 QAVLKKYDILFIADEVICAFGRLG-T-MFGCDKYNI-----KPD----LVSLAKALS-SAYMPIGAVLV-SPEISDVIHS 353 (504)
T ss_pred HHHHHHcCCEEEecchhhCCcccc-h-hhHHHhcCC-----CCc----EEEeccccc-CCccccceEee-cHHHHhhhhc
Confidence 999999999999999997642233 2 222211110 223 348899998 66 58999888 5666666532
Q ss_pred h--------hh-cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhh---cCCceeecCCceEEEeeecC
Q 011570 304 M--------SS-FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLS---QVGIGCLKSNAGLFLWMDLH 371 (483)
Q Consensus 304 ~--------~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~---~~gi~~~~~~~g~f~~~~l~ 371 (483)
. .. .+..++++.+++.+.|+-- ++ +...++++++-+++.+.|+ +.++......-|+++-+++.
T Consensus 354 ~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i---~~--~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~ 428 (504)
T PLN02760 354 QSNKLGSFAHGFTYSGHPVSCAVALEALKIY---KE--RNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFV 428 (504)
T ss_pred ccccccCcccCCCCCCCHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEe
Confidence 1 11 1234666666655555321 10 1122233333334444333 33433223334567777774
Q ss_pred chhhccC-h----HHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 372 HLLKEQT-Y----EAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 372 ~~~~~~~-~----~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
....... . .....+...++ ++||.+.+.. ..+|++... ++++++++++++|.+++++.
T Consensus 429 ~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~g-------~~lrl~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 429 DNKSPNDPFPAEWGVGAYFGAECK-KRGMLVRVAG-------DNIMMSPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred cCCcccccccchhHHHHHHHHHHH-hCCcEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3211110 0 11224556666 4699987631 358999765 59999999999999998765
No 314
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.54 E-value=2.5e-11 Score=124.94 Aligned_cols=302 Identities=14% Similarity=0.129 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-------CC-CCeEEEeCCCCcChHHHHhhhcCc---
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-------DP-GDAFLVPTPYYPGFDRDLRWRTGV--- 166 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-------~~-gd~Vlv~~P~y~~~~~~~~~~~G~--- 166 (483)
+....+|+.+.+..+ ..-+.+++++++++++..++.... .+ ..+|+...-+|.+.........|.
T Consensus 97 ~~~~~lAe~L~~~~p----~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~ 172 (453)
T PRK06943 97 EPAIELAERLAALTG----GTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALF 172 (453)
T ss_pred HHHHHHHHHHHHhCC----CCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhh
Confidence 445556666654322 123589999999999999987652 12 367999999887754222111111
Q ss_pred ---------EEEEeecCCCCC--cc--------cCHHHHHHHHHHHHhcCCceeEEEEeC-CCCCCcC-CCCHHHHHHHH
Q 011570 167 ---------QLVPVVCDSSND--FK--------VTMEALEAAYEKAQESNIRIKGVLITN-PSNPLGT-FLDRETLKDIV 225 (483)
Q Consensus 167 ---------~~~~v~~~~~~~--~~--------~d~~~l~~~i~~~~~~~~~~~~i~l~~-P~NPtG~-~~~~~~l~~i~ 225 (483)
.+..++.+...+ +. -+++.+++.+.+ .+.++.+|++.- ...-.|. +.+.+.++++.
T Consensus 173 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr 249 (453)
T PRK06943 173 KDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAE---RAGKIAALIVEPLVQCAAGMAMHDPSYLRGLR 249 (453)
T ss_pred hcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEeccccccCCcccCCHHHHHHHH
Confidence 111222211100 01 124666666653 234677776664 2555676 45788899999
Q ss_pred HHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHH-
Q 011570 226 SFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARK- 303 (483)
Q Consensus 226 ~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~- 303 (483)
++|++||+++|.||+..++...+ .+.....+.- .+| ++ +++|.+| .| +.+|.+++ .+++.+.+..
T Consensus 250 ~lc~~~gillI~DEV~TG~GRtG--~~fa~~~~gv-----~PD-iv---t~gKgl~-gG~~Pi~av~~-~~ei~~~~~~~ 316 (453)
T PRK06943 250 ALCDRYGVHLIADEIAVGCGRTG--TFFACEQAGV-----WPD-FL---CLSKGIS-GGYLPLSLVLS-RDAIFAAFYDD 316 (453)
T ss_pred HHHHHcCCEEEeechhhCCCCCc--chhHHHhCCC-----CCC-eE---eeehhhc-cCcccceEEEE-cHHHHHhhccc
Confidence 99999999999999998743232 2222222211 223 22 5699998 88 59999999 5566665532
Q ss_pred -------hhhcCCCChHHHHHHHHhcC---ChhHHHHHHHHHHHHHHHHHHHHHHhhhcC----CceeecCCceEEEeee
Q 011570 304 -------MSSFGLVSSQTQHLIATMLS---DDQFVEKFIAESAKRIAERHKAFTWGLSQV----GIGCLKSNAGLFLWMD 369 (483)
Q Consensus 304 -------~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----gi~~~~~~~g~f~~~~ 369 (483)
....+..++++.+++.+.|+ +++. .++.++.-+++.+.|+++ ++.-.. .-|+++-++
T Consensus 317 ~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l--------~~~~~~~G~~l~~~L~~l~~~~~v~~vr-G~Gl~~gve 387 (453)
T PRK06943 317 DVTRGFLHSHSYTGNPLACRAALATLDLFAEDDV--------LARNARKSARLRAALAPLAAHPQVRHLR-QRGTIFAFD 387 (453)
T ss_pred CccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCH--------HHHHHHHHHHHHHHHHHHhcCCCEEeEe-ccccEEEEE
Confidence 11112246666666555543 2222 122223333344434332 333222 345677777
Q ss_pred cCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 370 LHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 370 l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
+...... .......+...++ ++||++.+.. +.+||+... ++++++++++++|.+++++.
T Consensus 388 l~~~~~~-~~~~~~~i~~~~~-~~Gll~~~~g-------~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 388 VALDGDA-ARTFSRRFFEAAL-ERELLLRPIG-------TTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred EccCCCc-chHHHHHHHHHHH-HCCcEEEecC-------CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 7521111 1111235666666 4699987631 359999655 59999999999999999875
No 315
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.54 E-value=3.6e-12 Score=121.17 Aligned_cols=296 Identities=17% Similarity=0.213 Sum_probs=185.7
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH----HhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD----LRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~~G~~~~~v 171 (483)
...|.+.||..-+. -.-+.+++++.++..++..++++||+|+...--|++.... ++.+ |+++..+
T Consensus 64 ~~vlE~RiAaLEGG----------~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~-Gi~v~fv 132 (426)
T COG2873 64 TDVLEERIAALEGG----------VAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRL-GIEVRFV 132 (426)
T ss_pred HHHHHHHHHHhhcc----------hhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhc-CcEEEEe
Confidence 46788888877552 2345567778899999999999999999888777665544 4554 9999888
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
.. .|++.++++|++ ++|+|++..-.||-+.+.+ +++|+++|+++|+++|+|..++.-++-.
T Consensus 133 d~-------~d~~~~~~aI~~------nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpyl~r--- 193 (426)
T COG2873 133 DP-------DDPENFEAAIDE------NTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPYLCR--- 193 (426)
T ss_pred CC-------CCHHHHHHHhCc------ccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcceecc---
Confidence 63 368999999986 8999999999999999999 8999999999999999999986432221
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHH-HHHhhh-------cCC--------CChHHH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSC-ARKMSS-------FGL--------VSSQTQ 315 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~-~~~~~~-------~~~--------~s~~~q 315 (483)
+ + ++.-.|+++|+||..|-.|--+|-++.+...+... -.++.. +.. ...+..
T Consensus 194 --P---~-------~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~ 261 (426)
T COG2873 194 --P---I-------EHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFII 261 (426)
T ss_pred --h---h-------hcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHH
Confidence 1 1 23556889999999988888888776642211111 000000 000 001111
Q ss_pred HHHHHhcCCh--------hHH----HHHHHHHHHHHHHHHHHHHHhhhcC-Ccee------------------ecCCceE
Q 011570 316 HLIATMLSDD--------QFV----EKFIAESAKRIAERHKAFTWGLSQV-GIGC------------------LKSNAGL 364 (483)
Q Consensus 316 ~~~~~~l~~~--------~~~----~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~------------------~~~~~g~ 364 (483)
.+-...|++- .|+ -+.+.-+.++..++...+.+.|+.+ .+.+ .+...|-
T Consensus 262 ~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~ 341 (426)
T COG2873 262 KARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGA 341 (426)
T ss_pred HHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCce
Confidence 1112222221 000 0123334555667777888888876 2222 1222344
Q ss_pred EEeeecCchhh-ccChHHHHHHHHHHHHh---cCeEeeCCCCCCCC-----------CCCEEEEEeccCCHHHHHHHHHH
Q 011570 365 FLWMDLHHLLK-EQTYEAEMALWRVIINE---VKLNVSPGSSFHCP-----------NPGWFRVCFANMDDRTMEIALSR 429 (483)
Q Consensus 365 f~~~~l~~~~~-~~~~~~~~~~~~~Ll~~---~gV~v~pg~~f~~~-----------~~~~iRis~~~~~~e~l~~~l~~ 429 (483)
.+.+.+..+.. ...+.+..+++..+..- .-+.+-|.+....+ .++.||+|++ + |+++.++.-
T Consensus 342 vltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVG-I--Ed~~DiiaD 418 (426)
T COG2873 342 VLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVG-I--EDIDDIIAD 418 (426)
T ss_pred EEEEEecChHHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEec-c--CCHHHHHHH
Confidence 66677765422 22233444555444321 12455665543321 2568999998 3 567777778
Q ss_pred HHHHHHH
Q 011570 430 ITSFMLK 436 (483)
Q Consensus 430 L~~~l~~ 436 (483)
|++++++
T Consensus 419 l~qAl~~ 425 (426)
T COG2873 419 LEQALEA 425 (426)
T ss_pred HHHHHhc
Confidence 8777654
No 316
>PRK07482 hypothetical protein; Provisional
Probab=99.53 E-value=1.6e-11 Score=126.85 Aligned_cols=311 Identities=10% Similarity=0.003 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc------C-C-CCeEEEeCCCCcChHHHHhhhcCc--
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA------D-P-GDAFLVPTPYYPGFDRDLRWRTGV-- 166 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~------~-~-gd~Vlv~~P~y~~~~~~~~~~~G~-- 166 (483)
.+.+..+|+.+.+... -..+.+++++++++++..++.... . + ..+|+....+|.+.........|.
T Consensus 93 ~~~~~~lAe~L~~~~p----~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~ 168 (461)
T PRK07482 93 TEASITLSKRIIDRAP----AGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSL 168 (461)
T ss_pred CHHHHHHHHHHHHhCC----CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCch
Confidence 4566667776665421 234689999999999999987652 1 2 257888888887753321111110
Q ss_pred ----------EEEEeecCCCCC----------c-ccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHH
Q 011570 167 ----------QLVPVVCDSSND----------F-KVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDI 224 (483)
Q Consensus 167 ----------~~~~v~~~~~~~----------~-~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i 224 (483)
.+..++.+.... + .-+++.+++.+.+. ...++.+|++.....-.|.+ .+.+.+++|
T Consensus 169 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~~~yl~~l 246 (461)
T PRK07482 169 FHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPPAGYWPAI 246 (461)
T ss_pred hhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCCHHHHHHH
Confidence 111121111000 0 01356666666421 12356666655445555766 577789999
Q ss_pred HHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCc-eEEEEEecChHHHHHHHH
Q 011570 225 VSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGF-RVGIIYSYNDQVVSCARK 303 (483)
Q Consensus 225 ~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~li~~~~~l~~~~~~ 303 (483)
.++|++||+++|.||+..++...+ . +.....+.- .+| ++ +++|.+| .|. .+|.+++ .+.+.+.+..
T Consensus 247 r~lc~~~giLlI~DEV~tGfGRtG-~-~~a~~~~gv-----~PD--iv--~~gKgl~-gG~~Pi~av~~-~~~i~~~~~~ 313 (461)
T PRK07482 247 QAVLKKYDILLIADEVVTGFGRLG-S-MFGSDHYGI-----EPD--LI--TVAKGLT-SAYAPLSGSIV-GEKVWDVLEQ 313 (461)
T ss_pred HHHHHHhCCEEEEeccccCCCcCc-c-hhhHHhcCC-----CCC--EE--EEccccc-cCccccceeee-cHHHHHHHhc
Confidence 999999999999999998743333 2 222222211 223 22 5699998 785 8998888 4556555432
Q ss_pred h---------hhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhh----hcCCceeecCCceEEEeeec
Q 011570 304 M---------SSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGL----SQVGIGCLKSNAGLFLWMDL 370 (483)
Q Consensus 304 ~---------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L----~~~gi~~~~~~~g~f~~~~l 370 (483)
. ...+..++++.+++.+.|+--. + ....+..++.-+++.+.| .++++......-|+++.+++
T Consensus 314 ~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel 388 (461)
T PRK07482 314 GSDEHGAIGHGWTYSGHPICAAAALANLDILE--R---ENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEF 388 (461)
T ss_pred ccccCCccccCCCCCcCHHHHHHHHHHHHHHH--h---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEe
Confidence 1 0112356677666655553211 0 011122233333344433 33444333444567777887
Q ss_pred CchhhccC-h----HHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 371 HHLLKEQT-Y----EAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 371 ~~~~~~~~-~----~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
........ + .....++..++ ++||++.++. ..+.+|+..+. ++++++++++++|.+++++.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~~-----~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 389 VADRDDRTPFDPALKIGPQVSAAAL-ERGVIARAMP-----HGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred ccCCCcCCCCChhhHHHHHHHHHHH-HCCcEEecCC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 53211000 0 11235666666 4699986532 12469998765 59999999999999999875
No 317
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.52 E-value=2.1e-11 Score=125.72 Aligned_cols=303 Identities=14% Similarity=0.162 Sum_probs=168.8
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhc--CcEEEE--
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRT--GVQLVP-- 170 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~--G~~~~~-- 170 (483)
.++...+|+.+.+... ..+.+.++++++++...+++... ...++|+...-+|.+....+.... |.....
T Consensus 138 ~~~~~~lAe~l~~~~p-----~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~ 212 (474)
T PLN02482 138 CLLENVLAEMVIDAVP-----SVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLP 212 (474)
T ss_pred CHHHHHHHHHHHHhCC-----CCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCC
Confidence 3556667777765422 25799999999999998886642 223678888888888653221100 110000
Q ss_pred ----eecCC-C----CCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCC-HHHHHHHHHHHhhcCcEEEEccc
Q 011570 171 ----VVCDS-S----NDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLD-RETLKDIVSFINEKNIHLVCDEI 240 (483)
Q Consensus 171 ----v~~~~-~----~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~-~~~l~~i~~~a~~~~~~iI~Dea 240 (483)
+|... . -.|+ |++.+++.+.+. +.++.+|++.......|.+.+ .+.+++|.++|++||+++|.||+
T Consensus 213 ~~~g~~~~~~~~~~~~~~n-d~~~l~~~l~~~---~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV 288 (474)
T PLN02482 213 DSPGVPKAATSATLTAPYN-DLEAVKKLFEAN---KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEV 288 (474)
T ss_pred CCCCCCCCCCCCeEEecCC-ChHHHHHHHHhC---CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 00000 0 0111 688898888642 234555555443555677665 77899999999999999999999
Q ss_pred cccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc-----CCCChHHH
Q 011570 241 YAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF-----GLVSSQTQ 315 (483)
Q Consensus 241 y~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~-----~~~s~~~q 315 (483)
+.++ ..+ . ........ . .+| + .+|+|.+| .|+.+|.+++ .+++.+.+.....+ ...++++.
T Consensus 289 ~tGf-R~g-~--~ga~~~~g-v---~PD--i--~t~gK~lg-gG~Pigav~g-~~ei~~~~~~~~~~~~~~T~~gnpl~~ 354 (474)
T PLN02482 289 MTGF-RIA-Y--GGAQEYFG-I---TPD--L--TTLGKVIG-GGLPVGAYGG-RREIMEMVAPAGPMYQAGTLSGNPLAM 354 (474)
T ss_pred ccCe-ecC-c--chHhHHhC-C---CCC--E--EEecchhh-CCCceEEEEE-cHHHHHhhccCCCcccccCcchhHHHH
Confidence 9764 332 2 12222211 0 223 2 38899998 8999999988 56676665321111 11355555
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc----CCceee-cCCceEEEeeecCc-hh----h--ccChHHHH
Q 011570 316 HLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ----VGIGCL-KSNAGLFLWMDLHH-LL----K--EQTYEAEM 383 (483)
Q Consensus 316 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~gi~~~-~~~~g~f~~~~l~~-~~----~--~~~~~~~~ 383 (483)
.++.+.|+.- ++ ....+++.++-+++.+.|++ .|+++. ..-++++ .+.+.. .. + ........
T Consensus 355 aAala~L~~l---~~--~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~-gi~f~~~~~~~~~~~~~~d~~~~~ 428 (474)
T PLN02482 355 TAGIHTLKRL---QQ--PGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMF-GFFFTEGPVYNFADAKKSDTAKFA 428 (474)
T ss_pred HHHHHHHHHH---hc--cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEE-EEEEecCCccChhhhccCCHHHHH
Confidence 5444443211 10 11223333334444444433 345543 2334433 222211 00 0 01111223
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 384 ALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 384 ~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
.+...+++ +||.+.|... . .++ +++. +++++++++++++.+++.+
T Consensus 429 ~~~~~l~~-~Gv~~~~~~~-~---~~~--psl~-ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 429 RFHRGMLE-EGVYLAPSQF-E---AGF--TSLA-HTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred HHHHHHHH-CCeEEeccCC-C---CCc--CCCC-CCHHHHHHHHHHHHHHHHh
Confidence 56677775 6999987421 1 111 3443 5999999999999998864
No 318
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.52 E-value=4.2e-11 Score=123.02 Aligned_cols=307 Identities=10% Similarity=0.055 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC-------C-CCeEEEeCCCCcChHHHHhhhcCc--
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD-------P-GDAFLVPTPYYPGFDRDLRWRTGV-- 166 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~-------~-gd~Vlv~~P~y~~~~~~~~~~~G~-- 166 (483)
.+....+|+.+.+... -..+.|++++++++++..++..... + ..+|+....+|.+.........|.
T Consensus 88 ~~~~~~la~~l~~~~p----~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~ 163 (442)
T PRK13360 88 HPKAFELANRIAEIAP----GGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVP 163 (442)
T ss_pred CHHHHHHHHHHHHhCC----CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChh
Confidence 3445566666654321 1236899999999999998865321 2 257999999887754321111111
Q ss_pred ----------EEEEeecCC---CCCccc--------CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHH
Q 011570 167 ----------QLVPVVCDS---SNDFKV--------TMEALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDI 224 (483)
Q Consensus 167 ----------~~~~v~~~~---~~~~~~--------d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i 224 (483)
.+..+|... ...|.. .++.+++.+... ...++.+|++.......|.+ .+.+.+++|
T Consensus 164 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~fl~~l 241 (442)
T PRK13360 164 NRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGYLQRL 241 (442)
T ss_pred hhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHHHHHH
Confidence 112222211 001111 145666666431 11345555555445556775 467789999
Q ss_pred HHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHH
Q 011570 225 VSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARK 303 (483)
Q Consensus 225 ~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~ 303 (483)
.++|++||+++|+||++.++...+ . ....... . . .+| ++ +|||.+| .| +.+|.+++ ++++.+.+..
T Consensus 242 r~lc~~~g~llI~DEv~tG~GrtG-~-~~a~~~~-g-v---~PD--iv--t~gK~l~-gG~~P~gav~~-~~~i~~~~~~ 308 (442)
T PRK13360 242 REICDKHGILLIFDEVITGFGRLG-A-PFAAQYF-G-V---TPD--LL--TCAKGLT-NGAIPMGAVFV-SSEIHDAFMQ 308 (442)
T ss_pred HHHHHHcCCEEEEechhhCCCCCc-c-chhhhhc-C-C---CCc--ee--eeeeccc-cCccceEEEEE-cHHHHHHhhc
Confidence 999999999999999997642222 2 1121111 1 0 223 32 8899997 66 78999888 5556555432
Q ss_pred h--------hh-cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-cee--ecCCceEEEeeecC
Q 011570 304 M--------SS-FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVG-IGC--LKSNAGLFLWMDLH 371 (483)
Q Consensus 304 ~--------~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~--~~~~~g~f~~~~l~ 371 (483)
. .. .+..++++.+++.+.|+- +++ ....++.++.-+++.+.|++++ ... ....-|++.-+.+.
T Consensus 309 ~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~---l~~--~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~ 383 (442)
T PRK13360 309 GPEAGIEFFHGYTYSGHPLACAAALATLDL---YER--EGLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELA 383 (442)
T ss_pred CCccccccccCCCCCCCHHHHHHHHHHHHH---HHh--CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEe
Confidence 1 11 122456665555555432 111 1122333444445555554431 111 11223445555553
Q ss_pred chhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 372 HLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 372 ~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
....... ....++...++ ++||.+.++ .+.+||+... ++++++++++++|.+++++
T Consensus 384 ~~~~~~~-~~~~~~~~~l~-~~Gvl~~~~-------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~ 440 (442)
T PRK13360 384 PRDGKPG-KRAYEVFLKCF-EKGLMIRYT-------GDILALSPPLIIEEAQIDELFDILAQALKE 440 (442)
T ss_pred cCCCCcc-hhHHHHHHHHH-HCCcEEEec-------CCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 2111111 12235666666 469998753 2469999765 5999999999999998865
No 319
>PLN02263 serine decarboxylase
Probab=99.51 E-value=1.7e-11 Score=124.23 Aligned_cols=292 Identities=8% Similarity=0.023 Sum_probs=190.5
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCC--cEEEeCChhHHHHHHHHHhcC--CCCeEEEeCCCCcChHHHHhhhcCcEEEE
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPD--RIVMSGGATGAHETVAFCLAD--PGDAFLVPTPYYPGFDRDLRWRTGVQLVP 170 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~--~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~ 170 (483)
+..++.+.+-+|+.+.+| .+++ .-++|+|+|+++...+.+..+ +...|++++-+|.++..++..+ |.+++.
T Consensus 130 ~s~~~E~~Vi~wla~L~g----~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~ll-gi~~~~ 204 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWE----IEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMY-RMECVK 204 (470)
T ss_pred hHHHHHHHHHHHHHHHhC----CCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhc-CCcceE
Confidence 468999999999999887 3332 368899999999888766533 3347888999999999998886 999999
Q ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCc-----EEEEccccccCc
Q 011570 171 VVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNI-----HLVCDEIYAATV 245 (483)
Q Consensus 171 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~-----~iI~Deay~~~~ 245 (483)
||.++ ++.+|+++|+++|.+. ..++-+|+.+-++.++|.+=+ +++|.++|+++|+ |+.+|.+|+++.
T Consensus 205 Vp~d~--~g~mD~~aL~~aI~~d---~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~ 276 (470)
T PLN02263 205 VDTLV--SGEIDCADFKAKLLAN---KDKPAIINVNIGTTVKGAVDD---LDLVIKTLEECGFSQDRFYIHCDGALFGLM 276 (470)
T ss_pred eccCC--CCcCcHHHHHHHHHhC---CCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHcCCccCCeeEEEeccchhhH
Confidence 99864 5689999999999752 123445566777889999988 7788888888886 999999998764
Q ss_pred cCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc-------CCCCh-----H
Q 011570 246 FTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF-------GLVSS-----Q 313 (483)
Q Consensus 246 ~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~-------~~~s~-----~ 313 (483)
... ........... .-.-+..+.+|.++ ....+|.++...+.+ ..+.....| ...+. +
T Consensus 277 lPf-~~~~~~~df~~-------~vDSIsvD~HK~l~-~P~~cgvll~R~~~~-~~~~~~~~Yl~~~d~ti~gSR~g~~al 346 (470)
T PLN02263 277 MPF-VKRAPKVTFKK-------PIGSVSVSGHKFVG-CPMPCGVQITRMEHI-NVLSSNVEYLASRDATIMGSRNGHAPI 346 (470)
T ss_pred hhh-cccccccCCCc-------CccEEEECCccccC-CCcCEEEEEEehhhH-hhhccChHhhCCCCCCcCCCCCcHHHH
Confidence 311 00011111111 12223458999876 778899998864332 222111111 01111 1
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceee-cCCceEEEeeecCchhhccChHHHHHHHHHHHHh
Q 011570 314 TQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCL-KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINE 392 (483)
Q Consensus 314 ~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~-~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~ 392 (483)
...++...+...+ +++..+...+..+++.+.|++.|+... .|.. +.+.+.-|.. +. . .
T Consensus 347 ~lW~~L~~~G~~G-----~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s-~~V~f~~p~~----------~~----~-~ 405 (470)
T PLN02263 347 FLWYTLNRKGYRG-----FQKEVQKCLRNAHYLKDRLREAGISAMLNELS-STVVFERPKD----------EE----F-V 405 (470)
T ss_pred HHHHHHHHhCHHH-----HHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCc-eEEEEecCch----------HH----h-h
Confidence 2222223333222 355555666777889999988887654 4554 4555544320 10 1 2
Q ss_pred cCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 393 VKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 393 ~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
.|..+.. .++.++|++.. .+.+.++++++.|++.....
T Consensus 406 ~gW~L~~-------~~~~~Hivvmphv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 406 RRWQLAC-------QGNIAHVVVMPSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred cceEEcc-------CCCcEEEEEcCCCCHHHHHHHHHHHHHHHhhh
Confidence 3555543 12469999975 48899999999998876644
No 320
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.51 E-value=4.8e-11 Score=122.38 Aligned_cols=300 Identities=13% Similarity=0.127 Sum_probs=169.1
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCcEEEE-----
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGVQLVP----- 170 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~----- 170 (483)
+....+|+.+.+... ..+.+++++++++++..++.... ....+|+...-+|.+....+....|.....
T Consensus 93 ~~~~~la~~l~~~~p-----~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~ 167 (428)
T PRK12389 93 ELEIEFAKMLKEAIP-----SLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPD 167 (428)
T ss_pred HHHHHHHHHHHHhCC-----CCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCC
Confidence 445556666654321 24689999999999999887542 223678888888887654333221211100
Q ss_pred ---eecCC-CCCc---ccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccccc
Q 011570 171 ---VVCDS-SNDF---KVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYA 242 (483)
Q Consensus 171 ---v~~~~-~~~~---~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~ 242 (483)
++... .+-. ..|++.+++.+.+. +.++.+|++.....-.|.+. +.+.+++|.++|++||+++|.||++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~t 244 (428)
T PRK12389 168 SAGVPKSIAQEVITVPFNDIEALKEALDKW---GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVIT 244 (428)
T ss_pred CCCCCCcccCceEEcCCCCHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 00000 0000 12688888888642 23566666654466667655 67789999999999999999999998
Q ss_pred cCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh-----hcCCCChHHHHH
Q 011570 243 ATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS-----SFGLVSSQTQHL 317 (483)
Q Consensus 243 ~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~-----~~~~~s~~~q~~ 317 (483)
++ -.. . ........ . .+| + -+++|.+| .|+.+|.+++ ++++.+.+.... ..+..++++.++
T Consensus 245 G~-Rt~-~--~~a~~~~g-v---~PD--i--vt~gK~lg-gG~Pi~av~~-~~~i~~~~~~~~~~~~~~T~~gnpl~~Aa 310 (428)
T PRK12389 245 AF-RFM-Y--GGAQDLLG-V---EPD--L--TALGKIIG-GGLPIGAYGG-RKDIMEQVAPLGPAYQAGTMAGNPASMAA 310 (428)
T ss_pred cc-ccC-c--chhhHHhC-C---CCC--e--eeechhhc-CCCceeEEeE-HHHHHhhhccCCCcccccCCccCHHHHHH
Confidence 74 221 1 11111111 0 223 2 28899998 8999999988 566666553211 112356666555
Q ss_pred HHHhcC---ChhHHHHHHHHHHHHHHHHHHHHHHhhhc----CCceeec-CCceEEEeeecCch-hh---c---cChHHH
Q 011570 318 IATMLS---DDQFVEKFIAESAKRIAERHKAFTWGLSQ----VGIGCLK-SNAGLFLWMDLHHL-LK---E---QTYEAE 382 (483)
Q Consensus 318 ~~~~l~---~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~gi~~~~-~~~g~f~~~~l~~~-~~---~---~~~~~~ 382 (483)
+.+.|+ +.+ ..+++++.-+++.+.|++ +++.... ..+|++ -+.+... .. . ......
T Consensus 311 ala~L~~l~~~~--------l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g~~-gi~~~~~~~~~~~~~~~~~~~~~ 381 (428)
T PRK12389 311 GIACLEVLQQEG--------VYEKLDRLGAMLEEGILEAAEKHGITITINRLKGAL-TVYFTDEKVTNYDQAERSDGEAF 381 (428)
T ss_pred HHHHHHHHhccc--------HHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCcEE-EEEEeCCCCCChhhhcccCHHHH
Confidence 555443 222 122233333444444433 4432222 233433 3444211 00 0 001112
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 383 MALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 383 ~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
..+...++ ++||.+.+.. .+.+.+++. +++++++++++++.+++++
T Consensus 382 ~~~~~~l~-~~Gv~~~~~~------~~~~~~~l~-~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 382 GKFFKLML-NQGINLAPSK------YEAWFLTTA-HTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred HHHHHHHH-HCCcEeecCC------CCCeeecCC-CCHHHHHHHHHHHHHHHHh
Confidence 35566666 4699998752 112455554 6999999999999998864
No 321
>PRK07483 hypothetical protein; Provisional
Probab=99.51 E-value=4.3e-11 Score=122.95 Aligned_cols=312 Identities=13% Similarity=0.107 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC-------CC-CeEEEeCCCCcChHHHHhhhcCcE-
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD-------PG-DAFLVPTPYYPGFDRDLRWRTGVQ- 167 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~P~y~~~~~~~~~~~G~~- 167 (483)
.+....+|+.+.+... -..+.+++++++++++..++..... +| .+|+...-+|++.........|..
T Consensus 72 ~~~~~~lae~L~~~~p----~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~ 147 (443)
T PRK07483 72 TEPAEALADRLVAAAP----AGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAW 147 (443)
T ss_pred CHHHHHHHHHHHHhCC----CCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcc
Confidence 3455566666654321 1346899999999999988865421 33 568888888876543222211211
Q ss_pred -----------EEEeecCCCCCccc-----C--------HHHHHHHHHHHHhcCCceeEEEEeCCCC-CCcC-CCCHHHH
Q 011570 168 -----------LVPVVCDSSNDFKV-----T--------MEALEAAYEKAQESNIRIKGVLITNPSN-PLGT-FLDRETL 221 (483)
Q Consensus 168 -----------~~~v~~~~~~~~~~-----d--------~~~l~~~i~~~~~~~~~~~~i~l~~P~N-PtG~-~~~~~~l 221 (483)
+..++... .|.- + ++.+++.+... ...++.+|++..... -.|. ..+.+.+
T Consensus 148 ~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvivEPiqg~~gG~~~~~~~fl 223 (443)
T PRK07483 148 RREPFAPLLIEAHHVSPCY--AYREQRAGESDEAYGQRLADELEAKILEL--GPDTVAAFVAETVVGATAGAVPPVPGYF 223 (443)
T ss_pred cccccCCCCCCCEEeCCCc--cccccccCCCHHHHHHHHHHHHHHHHHhc--CCCceEEEEEeCcccCcCCeEeCCHHHH
Confidence 11122110 0110 0 24455544321 123566666653342 2354 5578899
Q ss_pred HHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCc-eEEEEEecChHHHHH
Q 011570 222 KDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGF-RVGIIYSYNDQVVSC 300 (483)
Q Consensus 222 ~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~li~~~~~l~~~ 300 (483)
+++.++|++||+++|.||+..++...+ .+.....+.- .+| |+ +++|.+| .|+ .+|.+++ .+++.+.
T Consensus 224 ~~lr~lc~~~gillI~DEV~tGfGRtG--~~~a~~~~gv-----~PD--iv--~~gK~l~-gG~~Pi~av~~-~~~i~~~ 290 (443)
T PRK07483 224 KRIREVCDRYGVLLILDEVMCGMGRTG--TLFACEEDGV-----APD--LV--TIAKGLG-AGYQPIGAVLA-SDRIYDA 290 (443)
T ss_pred HHHHHHHHHhCCEEEEecceeCcccCc--HHHHHhhcCC-----CCC--ee--eehhhhc-cCccccEEEEE-cHHHHHH
Confidence 999999999999999999998742222 2222222211 223 22 6799998 896 9999999 5556555
Q ss_pred HHHh------hhcCCCChHHHHHHHHhcC---ChhHHHHHHHHHHHHHHHHHHHHHHhhh----cCCceeecCCceEEEe
Q 011570 301 ARKM------SSFGLVSSQTQHLIATMLS---DDQFVEKFIAESAKRIAERHKAFTWGLS----QVGIGCLKSNAGLFLW 367 (483)
Q Consensus 301 ~~~~------~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~l~~~~~~l~~~L~----~~gi~~~~~~~g~f~~ 367 (483)
+... ...+..++++.+++.+.|+ +++. .+..++.-+++.+.|+ ++++......-|+++-
T Consensus 291 ~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l--------~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~g 362 (443)
T PRK07483 291 IADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGL--------LANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVG 362 (443)
T ss_pred HhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCH--------HHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEE
Confidence 5321 1112356666666555553 2222 2222233333333333 3332222334456777
Q ss_pred eecCchhhcc-----ChHHHHHHHHHHHHhcCeEeeCCCC-CCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 368 MDLHHLLKEQ-----TYEAEMALWRVIINEVKLNVSPGSS-FHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 368 ~~l~~~~~~~-----~~~~~~~~~~~Ll~~~gV~v~pg~~-f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+++....... .......+...+++ +||++.+... ......+.+||.... ++++++++++++|.+++.+..
T Consensus 363 ie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~ 439 (443)
T PRK07483 363 VELVADRATKAPFDPALKLHARIKREAMA-RGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAAL 439 (443)
T ss_pred EEEeecccccCCCCchhhHHHHHHHHHHH-CCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7764211000 00112356666664 6999986421 101113579998876 599999999999999997654
No 322
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.50 E-value=9.9e-12 Score=131.33 Aligned_cols=172 Identities=14% Similarity=0.176 Sum_probs=118.0
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS 175 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~ 175 (483)
..+..+..|+.++ .....+++||+|.++.+++.+++.+||.|+++..||-+....+... |++.+.++...
T Consensus 197 i~eAe~~aA~~fg---------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLils-ga~PVYl~P~~ 266 (713)
T PRK15399 197 HLEAEEYIARTFG---------AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMS-DVVPIWLKPTR 266 (713)
T ss_pred HHHHHHHHHHHhC---------CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHc-CCeeEEecccc
Confidence 3455666666655 3457899999999999999999999999999999999988888775 99999887432
Q ss_pred CCCcc----cCH-----HHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEE-EEccccccCc
Q 011570 176 SNDFK----VTM-----EALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHL-VCDEIYAATV 245 (483)
Q Consensus 176 ~~~~~----~d~-----~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~i-I~Deay~~~~ 245 (483)
..|+ ++. +.++++|++.... ++++++++++|+. -|.+++ +++|++.| |+.+ ++||||+...
T Consensus 267 -n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~-~~p~~vvit~pTY-dGi~yd---~~~I~~~~---g~~~ilvDEAhgah~ 337 (713)
T PRK15399 267 -NALGILGGIPRREFTRDSIEEKVAATTQA-QWPVHAVITNSTY-DGLLYN---TDWIKQTL---DVPSIHFDSAWVPYT 337 (713)
T ss_pred -cccCCcCCCChhhccHHHHHHHHHhCCCc-CCceEEEEECCCC-CceeeC---HHHHHHHh---CCCEEEEeccchhhh
Confidence 2232 344 8888888764321 3457899999954 799999 55566666 4545 6999997642
Q ss_pred -cCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEE-EEEe
Q 011570 246 -FTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVG-IIYS 292 (483)
Q Consensus 246 -~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG-~li~ 292 (483)
|.. .+.+...+... ......++++.|.+|.+ +|+.-+ ++..
T Consensus 338 ~F~p--~~~~~sam~~~--~~aD~~i~~tQStHKtL--~alTQaS~iHv 380 (713)
T PRK15399 338 HFHP--IYQGKSGMSGE--RVPGKVIFETQSTHKML--AAFSQASLIHI 380 (713)
T ss_pred hcCc--ccCCcChhhCC--CCCCeeeeeeeehhccc--cccchheeeee
Confidence 222 12211111110 00123456689999997 677666 5555
No 323
>PRK06917 hypothetical protein; Provisional
Probab=99.50 E-value=7.4e-11 Score=121.35 Aligned_cols=316 Identities=15% Similarity=0.093 Sum_probs=176.3
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-------CCC-CeEEEeCCCCcChHHHHhhhcCcE-
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-------DPG-DAFLVPTPYYPGFDRDLRWRTGVQ- 167 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-------~~g-d~Vlv~~P~y~~~~~~~~~~~G~~- 167 (483)
.+.+..+|+.+.+... -..+.+++++++++++..++.... .+| .+|+...-+|.+.........|..
T Consensus 73 ~~~~~~lae~L~~~~p----~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~ 148 (447)
T PRK06917 73 SEPAEKLAKKLSDLSP----GDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPL 148 (447)
T ss_pred CHHHHHHHHHHHHhCC----CCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcc
Confidence 3455566666654421 123579999999999999987652 123 679998988877654332221211
Q ss_pred -----------EEEeecCCCC--Cccc--------CHHHHHHHHHHHHhcCCceeEEEEeCCC-CCCcC-CCCHHHHHHH
Q 011570 168 -----------LVPVVCDSSN--DFKV--------TMEALEAAYEKAQESNIRIKGVLITNPS-NPLGT-FLDRETLKDI 224 (483)
Q Consensus 168 -----------~~~v~~~~~~--~~~~--------d~~~l~~~i~~~~~~~~~~~~i~l~~P~-NPtG~-~~~~~~l~~i 224 (483)
+..++.+... .+.- +++.+++.+... ...++.+|++.... |--|. +.+.+.++++
T Consensus 149 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~l 226 (447)
T PRK06917 149 RRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERI--GAEHIAAFIAEPIIGAAGAAVVPPKGYYKVI 226 (447)
T ss_pred ccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCcCceecCCHHHHHHH
Confidence 1112211100 0001 234556655431 01256666665333 33444 5578899999
Q ss_pred HHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCc-eEEEEEecChHHHHHHHH
Q 011570 225 VSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGF-RVGIIYSYNDQVVSCARK 303 (483)
Q Consensus 225 ~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~li~~~~~l~~~~~~ 303 (483)
.++|++||+++|.||+..++.-.+ .......+.- .+| + -+++|.+| .|+ .+|.+++ .+++.+.+..
T Consensus 227 r~lc~~~g~llI~DEv~tGfGRtG--~~~a~~~~gv-----~PD--i--~~~gK~l~-~G~~Pi~a~~~-~~~i~~~~~~ 293 (447)
T PRK06917 227 KEICDHYDILFIADEVMTGLGRTG--AMFAMEHWGV-----EPD--I--MTLGKGLG-AGYTPIAATVV-SDRVMEPILR 293 (447)
T ss_pred HHHHHHcCCEEEEechhhCcCccc--chhhHHhcCC-----CCC--E--EEeeehhc-cCCcceEEEEE-cHHHHHHHhc
Confidence 999999999999999998632222 2122221211 223 2 37799998 885 9999999 4566665532
Q ss_pred hh------hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc----CCceeecCCceEEEeeecCch
Q 011570 304 MS------SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ----VGIGCLKSNAGLFLWMDLHHL 373 (483)
Q Consensus 304 ~~------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~gi~~~~~~~g~f~~~~l~~~ 373 (483)
.. ..+..++++.+++.+.|+--. + ....+.+.+.-+++.+.|++ .++......-|+++.+++...
T Consensus 294 ~~~~~~~~~T~~gnpl~~aaa~a~l~~l~---~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~ 368 (447)
T PRK06917 294 GSRSIMSGHTLSANPLSAATALAVLEYME---K--HNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVAD 368 (447)
T ss_pred cCcccccccCCCCCHHHHHHHHHHHHHHH---H--CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEecc
Confidence 11 112356666666655553211 0 11222333333444444433 343333334456777776321
Q ss_pred hhc-----cChHHHHHHHHHHHHhcCeEeeCCCC-CCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 374 LKE-----QTYEAEMALWRVIINEVKLNVSPGSS-FHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 374 ~~~-----~~~~~~~~~~~~Ll~~~gV~v~pg~~-f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
... ........+...++ ++||++.++.. ......+.+|++... ++++++++++++|.+++++.
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 369 KKTKQPFSKSQAVASELISVAA-KNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred CCcCCCCcchhHHHHHHHHHHH-hCCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 100 00011235666666 46999987421 111123579999865 59999999999999999876
No 324
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.50 E-value=5.5e-12 Score=126.42 Aligned_cols=283 Identities=10% Similarity=0.081 Sum_probs=165.7
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcC-CCcEEEe-CChhHHHHHHHHHhcCCCCeEEEeCCCCcChH-HHHhhh-cCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFD-PDRIVMS-GGATGAHETVAFCLADPGDAFLVPTPYYPGFD-RDLRWR-TGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~-~~~i~it-~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~-~~~~~~-~G~~~~~v 171 (483)
+.+.|+.++++++ ++ ..+|+++ +++|.+++.++..++.+ +.+.+..=.|+.-. ..+... .+.++..+
T Consensus 43 ~~~~r~~l~~l~~--------~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~ 113 (361)
T TIGR01366 43 VGRVREGLAELFS--------LPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIV 113 (361)
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhccCCceEE
Confidence 4567777888776 33 3478886 55999999999998743 33333333343222 222221 02245555
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+.++.. .++.+ + ++++++|.+++-+|.||.+.+.+ +| ++++|+++|+|.+.+ +.. .+
T Consensus 114 ~~~~~~--~~~~~-----~------~~~~~lV~~~h~et~tG~~~pi~---~I---~~~~g~~~iVDavqs---~g~-~~ 170 (361)
T TIGR01366 114 TADPGS--APEPQ-----A------DPGVDVIAWAHNETSTGVAVPVR---RP---EGSDDALVVIDATSG---AGG-LP 170 (361)
T ss_pred ecCCCC--CCCCc-----c------CCCCCEEEEcccCCccceecccc---cc---cccCCCeEEEEcCcc---ccC-CC
Confidence 544321 23321 1 24789999999999999999954 44 478999999999986 333 22
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh-----------------hh---cCCCC
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM-----------------SS---FGLVS 311 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~-----------------~~---~~~~s 311 (483)
.++.. ..+++.|..|.+|.+|- ++.++.+++.+.+ +... .. ....+
T Consensus 171 -idv~~-----------~D~~~~s~~K~lg~~~G-l~~~~~s~~~~~~-~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~ 236 (361)
T TIGR01366 171 -VDIAE-----------TDVYYFAPQKNFASDGG-LWLAIMSPAALER-IEAIAASGRWVPEFLSLPTAVDNSLKNQTYN 236 (361)
T ss_pred -CCHHH-----------CCEEEEEchhhcCCCCc-eEEEEECHHHHhh-hhcccCCCCCCchhhhHHHHHhccccCCCCC
Confidence 33332 23577899999997752 5555664443322 2210 00 01122
Q ss_pred hHHHH---HHHHhcCChhHHHHH--HHHHHHHHHHHHHHHHHhhhcCC-ceeecC-C---ceEEEeeecCchhhccChHH
Q 011570 312 SQTQH---LIATMLSDDQFVEKF--IAESAKRIAERHKAFTWGLSQVG-IGCLKS-N---AGLFLWMDLHHLLKEQTYEA 381 (483)
Q Consensus 312 ~~~q~---~~~~~l~~~~~~~~~--~~~~~~~l~~~~~~l~~~L~~~g-i~~~~~-~---~g~f~~~~l~~~~~~~~~~~ 381 (483)
++... ++.++++ ++.+. ++...++.++..+++.+.|.+.+ ++.+.. . ......+.+++..+
T Consensus 237 tp~i~~i~~l~~al~---~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~~------ 307 (361)
T TIGR01366 237 TPAIATLALLAEQID---WMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDID------ 307 (361)
T ss_pred CchHHHHHHHHHHHH---HHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCccC------
Confidence 22222 2233332 22221 34555677788888888888886 454421 1 11112233333222
Q ss_pred HHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 382 EMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 382 ~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
..++...| +++||.+.++.. ..+.+.+|+++.. .+.++++.++++|++++++
T Consensus 308 ~~~v~~~L-~~~gI~i~~~~~--~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 308 AATVAKIL-RANGIVDTEPYR--KLGRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred HHHHHHHH-HHCCCeeccCcc--ccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 22566666 456999987642 2235689999976 6999999999999998765
No 325
>PRK06062 hypothetical protein; Provisional
Probab=99.50 E-value=4.2e-11 Score=123.34 Aligned_cols=310 Identities=14% Similarity=0.128 Sum_probs=172.0
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCcE-------
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGVQ------- 167 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~~------- 167 (483)
.+.+..+|+.+.+... -..+.|+++++++++...++.... ....+|+...-+|.+.........|..
T Consensus 94 ~~~~~~lae~L~~~~p----~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~ 169 (451)
T PRK06062 94 NDARSEAARLIAERAP----GDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDT 169 (451)
T ss_pred CHHHHHHHHHHHHhCC----CCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCC
Confidence 4455666666654421 124689999999999999987642 223678888888877654332221211
Q ss_pred ----EEEeecCC--CCCcc--cC-------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHhhc
Q 011570 168 ----LVPVVCDS--SNDFK--VT-------MEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFINEK 231 (483)
Q Consensus 168 ----~~~v~~~~--~~~~~--~d-------~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~~~ 231 (483)
+..++.+. ...|. -| ++.+++.++.. ...++.+|++..-..-.|.+. +.+.+++|.++|++|
T Consensus 170 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~ 247 (451)
T PRK06062 170 GRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELE--GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRH 247 (451)
T ss_pred CCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc
Confidence 11222111 00110 12 56666666421 113566666554455557664 788899999999999
Q ss_pred CcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCc-eEEEEEecChHHHHHHHHh---hh-
Q 011570 232 NIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGF-RVGIIYSYNDQVVSCARKM---SS- 306 (483)
Q Consensus 232 ~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~li~~~~~l~~~~~~~---~~- 306 (483)
|+++|.||++.+ |+..........+.- .+| +-+|+|.+| .|+ .+|.+++. +++.+.+... ..
T Consensus 248 g~lLI~DEV~tG--fGRtG~~~a~~~~gv-----~PD----i~t~gK~lg-gG~~Pigav~~~-~~i~~~~~~~~~~~~~ 314 (451)
T PRK06062 248 GIVLIADEVMAG--FGRTGKWFAIEHFGV-----VPD----LITFAKGVN-SGYVPLGGVAIS-EAIAATFADRPYPGGL 314 (451)
T ss_pred CCEEEeeccccC--CCcCcHHHHHHhcCC-----CCC----eeeechhhh-cCCcCcEEEEEc-HHHHHHhccCCCCCCC
Confidence 999999999987 433111111111111 223 337899998 784 99999984 5666665321 11
Q ss_pred cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHH-HHHHHhhhc----CCceeecCCceEEEeeecCchhhcc----
Q 011570 307 FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERH-KAFTWGLSQ----VGIGCLKSNAGLFLWMDLHHLLKEQ---- 377 (483)
Q Consensus 307 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~-~~l~~~L~~----~gi~~~~~~~g~f~~~~l~~~~~~~---- 377 (483)
.+..++++.+++.+.|+-- ++ ....++.++.- +++.+.|++ .++......-|+++-+++.......
T Consensus 315 T~~gnpl~~Aaa~a~L~~l---~~--~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~ 389 (451)
T PRK06062 315 TYSGHPLACAAAVATINAM---EE--EGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLA 389 (451)
T ss_pred CCCCCHHHHHHHHHHHHHH---Hh--cCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCc
Confidence 1234566665555554321 10 01111122221 223333322 3332222233566666664210000
Q ss_pred C----hHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 378 T----YEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 378 ~----~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
. ......+...++ ++||.+.+. .+.+||+... ++++++++++++|.++++...
T Consensus 390 ~~~~~~~~~~~~~~~l~-~~Gvl~~~~-------~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 390 PYGASSAAMAAVKAACK-ERGLLPFVN-------GNRIHVVPPCTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred ccchhhHHHHHHHHHHH-HCCcEEeec-------CCEEEEECCccCCHHHHHHHHHHHHHHHHHhh
Confidence 0 011235666666 569987642 2469998865 599999999999999997654
No 326
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.50 E-value=3e-11 Score=123.35 Aligned_cols=301 Identities=12% Similarity=0.069 Sum_probs=172.3
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-------CCCCeEEEeCCCCcChHHHHhhhcCc---
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-------DPGDAFLVPTPYYPGFDRDLRWRTGV--- 166 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-------~~gd~Vlv~~P~y~~~~~~~~~~~G~--- 166 (483)
.+....+|+.+.+..+ ...+.+++++++++++..++.... .+..+|+....+|.+.........+.
T Consensus 85 ~~~~~~la~~L~~~~p----~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~ 160 (428)
T PRK07986 85 HPPAIELCRKLVAMTP----QPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNS 160 (428)
T ss_pred CHHHHHHHHHHHhhCC----CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchh
Confidence 3455666666654422 234689999999999999887543 12367999999887643222111121
Q ss_pred ----------EEEEeecCCCC---Cc-ccCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcC-CCCHHHHHHHHHHHhh
Q 011570 167 ----------QLVPVVCDSSN---DF-KVTMEALEAAYEKAQESNIRIKGVLITNP-SNPLGT-FLDRETLKDIVSFINE 230 (483)
Q Consensus 167 ----------~~~~v~~~~~~---~~-~~d~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~-~~~~~~l~~i~~~a~~ 230 (483)
.++.++..... .| .-|++.+++.++. .+.++.+|++... +.-.|. +.+.+.+++|.++|++
T Consensus 161 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~---~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~ 237 (428)
T PRK07986 161 MHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAA---HRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDR 237 (428)
T ss_pred hhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHh---CCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHH
Confidence 01122211100 01 1256677777753 2235555555542 444565 4467899999999999
Q ss_pred cCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh-----
Q 011570 231 KNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM----- 304 (483)
Q Consensus 231 ~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~----- 304 (483)
||+++|+||++.++...+ . ........- .+| |+ +++|.+| .| +.+|.+++ ++++.+.+...
T Consensus 238 ~g~lLI~DEv~tG~GrtG-~-~fa~~~~gv-----~PD--i~--t~gK~l~-gG~~p~~av~~-~~~i~~~~~~~~~~~~ 304 (428)
T PRK07986 238 EGILLIADEIATGFGRTG-K-LFACEHAGI-----APD--IL--CLGKALT-GGTMTLSATLT-TREVAETISNGEAGCF 304 (428)
T ss_pred cCCEEEEeccccCCccCC-C-eeeecccCC-----CCC--EE--Eechhhh-CCcccCcchhc-hHHHHHHhhcCCCCcc
Confidence 999999999997642222 2 111111110 222 33 6899997 78 58888888 56666665431
Q ss_pred --hhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC----CceeecCCceEEEeeecCchhhccC
Q 011570 305 --SSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV----GIGCLKSNAGLFLWMDLHHLLKEQT 378 (483)
Q Consensus 305 --~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----gi~~~~~~~g~f~~~~l~~~~~~~~ 378 (483)
...+..++++.+++.+.|+.- ++ ....++++++-+++.+.|+++ .+.-. ..-|+++-+.+....
T Consensus 305 ~~~~T~~g~p~~~aaa~a~L~~i---~~--~~~~~~~~~~g~~l~~~l~~l~~~~~i~~v-Rg~Gl~~~ve~~~~~---- 374 (428)
T PRK07986 305 MHGPTFMGNPLACAVANASLSLL---ES--GDWQQQVAAIEAQLREELAPLRDAPMVADV-RVLGAIGVVETTRPV---- 374 (428)
T ss_pred ccCCCCCcCHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHHHHHHHHHHhcCCCEEeE-eccceEEEEEeCCcc----
Confidence 111224566655555544321 10 012233344444455545443 12112 223567777775321
Q ss_pred hHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 379 YEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 379 ~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
....+...++ ++||.+.+. .+.+|+.... ++++++++++++|.+++++.
T Consensus 375 --~~~~~~~~l~-~~Gl~~~~~-------g~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 424 (428)
T PRK07986 375 --NMAALQRFFV-EQGVWIRPF-------GKLIYLMPPYIILPEQLQRLTAAVNRAVQDE 424 (428)
T ss_pred --cHHHHHHHHH-HCCcEEEec-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhc
Confidence 1225666666 569999763 1479998766 59999999999999998653
No 327
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.50 E-value=6.4e-11 Score=121.75 Aligned_cols=306 Identities=11% Similarity=0.082 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc------C-C-CCeEEEeCCCCcChHHHHhhhcCc---
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA------D-P-GDAFLVPTPYYPGFDRDLRWRTGV--- 166 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~------~-~-gd~Vlv~~P~y~~~~~~~~~~~G~--- 166 (483)
+....+|+.+.+... ...+.|++++++++++..++.... . + ..+|+....+|.+.........|.
T Consensus 92 ~~~~~la~~L~~~~p----~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~ 167 (445)
T PRK09221 92 PLAFELAERLAELAP----GGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNN 167 (445)
T ss_pred HHHHHHHHHHHHhCC----CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhh
Confidence 344456666654321 124689999999999999886542 1 1 257898898887654322111111
Q ss_pred ---------EEEEeecCC---CCCccc--------CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHH
Q 011570 167 ---------QLVPVVCDS---SNDFKV--------TMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIV 225 (483)
Q Consensus 167 ---------~~~~v~~~~---~~~~~~--------d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~ 225 (483)
.+..+|.+. ...+.. ..+.+++.++.. ...++.+|++.......|.+. +.+.+++|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~ 245 (445)
T PRK09221 168 RKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALH--DASTIAAVIVEPMAGSAGVLVPPKGYLQRLR 245 (445)
T ss_pred hhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCCCcccCCHHHHHHHH
Confidence 112222211 000111 134566666431 113566666654466677754 677899999
Q ss_pred HHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHH-
Q 011570 226 SFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARK- 303 (483)
Q Consensus 226 ~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~- 303 (483)
++|++||+++|.||++.++...+ . ......+.- .+| + -++||.++ .| +.+|.+++ ++++.+.+..
T Consensus 246 ~lc~~~g~llI~DEV~tG~GRtG-~-~~~~~~~gv-----~PD--i--~~~gK~l~-gG~~Pi~av~~-~~~i~~~~~~~ 312 (445)
T PRK09221 246 EICDKHGILLIFDEVITGFGRLG-A-AFAAERFGV-----TPD--I--ITFAKGLT-NGAIPMGAVIA-SDEIYDAFMQG 312 (445)
T ss_pred HHHHHcCCEEEEeehhhCCCcCc-h-hhHHHhcCC-----CCC--E--EEeccccc-cCcccceeeEE-cHHHHHhhccC
Confidence 99999999999999997632222 2 112211110 223 2 38899997 66 78999888 4556555421
Q ss_pred -------hhh-cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cce--eecCCceEEEeeecCc
Q 011570 304 -------MSS-FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIG--CLKSNAGLFLWMDLHH 372 (483)
Q Consensus 304 -------~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~--~~~~~~g~f~~~~l~~ 372 (483)
... .+..++++.+++.+.|+.- ++ ....++.++.-+++.+.|+++ +.. .....-|++.-+++..
T Consensus 313 ~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i---~~--~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~ 387 (445)
T PRK09221 313 PEYAIEFFHGYTYSAHPVACAAGLATLDIY---RE--EDLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAP 387 (445)
T ss_pred cccccccccccCCCcCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEec
Confidence 011 1224555555544444321 11 112334444555555555543 211 1112234566666643
Q ss_pred hhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 373 LLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 373 ~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
...... .....+.+.++ ++||.+.++ .+.+||+... ++++++++++++|++++++
T Consensus 388 ~~~~~~-~~~~~~~~~~~-~~Gv~~~~~-------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~ 443 (445)
T PRK09221 388 RPGAPG-ARGYEAFMKCF-EKGLLVRYT-------GDTIALSPPLIIEKAQIDELVDALGDALRA 443 (445)
T ss_pred cccccc-chHHHHHHHHH-HCCeEEeec-------CCEEEEECCccCCHHHHHHHHHHHHHHHHh
Confidence 111111 11235666666 459998753 2479999865 5999999999999999865
No 328
>PRK12403 putative aminotransferase; Provisional
Probab=99.50 E-value=6.7e-11 Score=122.13 Aligned_cols=311 Identities=9% Similarity=0.069 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-------CCCC-eEEEeCCCCcChHH-HHhhhcCcE
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-------DPGD-AFLVPTPYYPGFDR-DLRWRTGVQ 167 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-------~~gd-~Vlv~~P~y~~~~~-~~~~~~G~~ 167 (483)
.+....+++.+.+..+ -..+.+++++++++|+..++.... +++. .|+....+|.+... .+.. .|.+
T Consensus 97 ~~~~~~lae~L~~~~p----~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~-s~~~ 171 (460)
T PRK12403 97 HPAVIELSELLFSLLP----GHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATAL-GGMK 171 (460)
T ss_pred CHHHHHHHHHHHHhCC----CCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhc-CCCc
Confidence 3445555555544322 123689999999999999987763 2333 35555666765432 2221 1221
Q ss_pred -----------EEEeecCC--CCCccc--------CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHHH
Q 011570 168 -----------LVPVVCDS--SNDFKV--------TMEALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDIV 225 (483)
Q Consensus 168 -----------~~~v~~~~--~~~~~~--------d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~ 225 (483)
+..+|.+. ..++.+ +.+.+++.+.+. ...++.+|++.....-.|.+ .+.+.+++|.
T Consensus 172 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr 249 (460)
T PRK12403 172 FMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILEL--GAENVAGFVAEPFQGAGGMIFPPESYWPEIQ 249 (460)
T ss_pred cccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHh--CCCceEEEEEccccCCCCCccCCHHHHHHHH
Confidence 12222110 000111 124455554321 11245555554335555765 4678899999
Q ss_pred HHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCc-eEEEEEecChHHHHHHHHh
Q 011570 226 SFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGF-RVGIIYSYNDQVVSCARKM 304 (483)
Q Consensus 226 ~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~li~~~~~l~~~~~~~ 304 (483)
++|++||+++|.||++.++ +..........+.- .+| |+ +++|.+| .|. .+|.+++ .+.+.+.+...
T Consensus 250 ~lc~~~g~lLI~DEV~tGf--GRtG~~~a~e~~gv-----~PD--iv--~~gK~lg-gG~~Piga~v~-~~~i~~~~~~~ 316 (460)
T PRK12403 250 RICRQYDVLLCADEVIGGF--GRTGEWFAHEHFGF-----EPD--TL--SIAKGLT-SGYVPMGGLVL-SKRIAEALVEQ 316 (460)
T ss_pred HHHHHcCCEEEEeccccCC--CcCchhhhhhhcCC-----CCC--eE--EEccccc-ccccceEEEEE-CHHHHHHHhcC
Confidence 9999999999999999764 33122122122211 222 33 5899998 784 9998888 46666655321
Q ss_pred ------hhcCCCChHHHHHHHHhcC---ChhHHHHHHH-HHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchh
Q 011570 305 ------SSFGLVSSQTQHLIATMLS---DDQFVEKFIA-ESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLL 374 (483)
Q Consensus 305 ------~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~-~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~ 374 (483)
...+..++++.+++.+.|+ +++. .+... +.-+++ ++.+.+...+.++......-|+++.+++....
T Consensus 317 ~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l-~~~~~~~~g~~l---~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~ 392 (460)
T PRK12403 317 GGVFAHGLTYSGHPVAAAVAIANLKALRDEGV-VTRVKDDTGPYL---QRCLREVFGDHPLVGEVQGAGLVAALQFAEDK 392 (460)
T ss_pred CCccccCCCCCCCHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHH---HHHHHHHHhcCCCEEeEeecceEEEEEEccCc
Confidence 1112245666665555543 2221 11111 111122 22233333334443334445677777774311
Q ss_pred hc-cChH----HHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 375 KE-QTYE----AEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 375 ~~-~~~~----~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
.. .... ....+...++ +.||.+.+. .+.+|++... ++++++++++++|.+++++..+
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~-------~~~~~l~Ppl~it~~eid~~~~~l~~al~~~~~ 455 (460)
T PRK12403 393 ATRKRFANENDLAWRCRTIGF-EEGVIIRST-------LGRMIMAPALVAGRAEIDELVDKTRIAVDRTAR 455 (460)
T ss_pred cccccccchhHHHHHHHHHHH-hCCEEEEec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 10 0000 0112334445 569998742 1358999876 4999999999999999988754
No 329
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.49 E-value=3.2e-11 Score=123.28 Aligned_cols=301 Identities=10% Similarity=0.083 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-------CCC-CeEEEeCCCCcChHHHHhhhcCc---
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-------DPG-DAFLVPTPYYPGFDRDLRWRTGV--- 166 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-------~~g-d~Vlv~~P~y~~~~~~~~~~~G~--- 166 (483)
+....+|+.+..... ...+.|++++++++++..++.... ++| .+|+....+|.+.........|.
T Consensus 87 ~~~~~lae~L~~~~p----~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~ 162 (429)
T PRK06173 87 EPAVELAQKLLEILP----PSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTG 162 (429)
T ss_pred HHHHHHHHHHHhhCC----CCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchh
Confidence 334445555543321 234689999999999999886643 133 57888888887742111111010
Q ss_pred ----------EEEEeecCCC---CCcc-cCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcCC-CCHHHHHHHHHHHhh
Q 011570 167 ----------QLVPVVCDSS---NDFK-VTMEALEAAYEKAQESNIRIKGVLITNP-SNPLGTF-LDRETLKDIVSFINE 230 (483)
Q Consensus 167 ----------~~~~v~~~~~---~~~~-~d~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~~-~~~~~l~~i~~~a~~ 230 (483)
.+..+|.+.. ..+. -+++.+++.+.. .+.++.+|++... ..-.|.+ .+.+.++++.++|++
T Consensus 163 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~---~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~ 239 (429)
T PRK06173 163 MHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQ---KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQ 239 (429)
T ss_pred hhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHh---CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHH
Confidence 0112221110 0000 135666666653 2346777666642 5656765 688899999999999
Q ss_pred cCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHH------
Q 011570 231 KNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARK------ 303 (483)
Q Consensus 231 ~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~------ 303 (483)
||+++|.||++.+ |+..........+.- .+| |+ +|+|.++ .| +.+|-+++ .+++.+.+..
T Consensus 240 ~g~llI~DEv~tG--~GrtG~~~a~~~~gv-----~PD--iv--~~gK~l~-gG~~p~~a~~~-~~~i~~~~~~~~~~~~ 306 (429)
T PRK06173 240 YGVLLIFDEIATG--FGRTGKLFALEHAGV-----VPD--IM--CIGKALT-GGYLTLSATIT-TEAIAQTICSGEAKCF 306 (429)
T ss_pred cCCeEEecchhcC--CCcCCcchHHHhcCC-----CCC--EE--Eeehhhh-CCccccceEEe-cHHHHHHHhcCCCCcc
Confidence 9999999999966 433122112221110 223 33 4899997 78 47888888 4556555431
Q ss_pred -hhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceee--cCCceEEEeeecCchhhccCh
Q 011570 304 -MSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCL--KSNAGLFLWMDLHHLLKEQTY 379 (483)
Q Consensus 304 -~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~--~~~~g~f~~~~l~~~~~~~~~ 379 (483)
....+..++++.+++.+.|+- +++ ....+.++++-+++.+.|++. +.... ...-|+++-+.+....
T Consensus 307 ~~~~T~~g~p~~~aaa~a~l~~---i~~--~~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~----- 376 (429)
T PRK06173 307 MHGPTFMANPLACAIAAESIRL---LLE--SPWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPV----- 376 (429)
T ss_pred ccCCCCCcCHHHHHHHHHHHHH---HHh--CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcc-----
Confidence 111122455555555554432 111 112334445555566666543 33222 1133567777775321
Q ss_pred HHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 380 EAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 380 ~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
....+...++ +.||.+.+.. +.+||.... ++++++++++++|.+++.+.
T Consensus 377 -~~~~i~~~l~-e~Gi~v~~~g-------~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 377 -NMATLQPRFV-EHGIWVRPFG-------KLVYIMPPFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred -cHHHHHHHHH-HCCeEEEecC-------CEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 1235666666 4699997631 379999977 59999999999999999764
No 330
>PRK06149 hypothetical protein; Provisional
Probab=99.49 E-value=8.8e-11 Score=131.62 Aligned_cols=311 Identities=12% Similarity=0.118 Sum_probs=173.0
Q ss_pred HHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHH---hcCCCCeEEEeCCCCcChHHHHhhhcC-----c----
Q 011570 99 FRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFC---LADPGDAFLVPTPYYPGFDRDLRWRTG-----V---- 166 (483)
Q Consensus 99 Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~---l~~~gd~Vlv~~P~y~~~~~~~~~~~G-----~---- 166 (483)
....+++.+.+... -..+.+++++++++++..+++. +.+ ...|+...-+|.+.........+ .
T Consensus 625 ~~~elae~L~~~~p----~~~~~v~f~~SGsEA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~ 699 (972)
T PRK06149 625 AVAEFSERLAALAP----DGLDTVFLVNSGSEANDLAIRLAWAASG-RRDVVSVLEAYHGWTVATDAVSTSIADNPQALE 699 (972)
T ss_pred HHHHHHHHHHHhCC----CCcCEEEEeCCchHHHHHHHHHHHHhcC-CCeEEEEeCCCCCcChhHhhhcCCccccccccC
Confidence 44445555543321 1246899999999999999873 433 35677777777654322110000 0
Q ss_pred ----EEEEeecCC--CCCcc-cC-----HHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcCCCCHHHHHHHHHHHhhcCc
Q 011570 167 ----QLVPVVCDS--SNDFK-VT-----MEALEAAYEKAQESNIRIKGVLITNP-SNPLGTFLDRETLKDIVSFINEKNI 233 (483)
Q Consensus 167 ----~~~~v~~~~--~~~~~-~d-----~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~~~~~~~l~~i~~~a~~~~~ 233 (483)
.+..++... ...|. .+ .+.+++.++.....+.++.+|++... ++-...+.+.+.++++.++|++||+
T Consensus 700 ~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~ 779 (972)
T PRK06149 700 TRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGG 779 (972)
T ss_pred CCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCC
Confidence 112222211 11121 11 24555555443333345655555433 4443455678889999999999999
Q ss_pred EEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh---hcCCC
Q 011570 234 HLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS---SFGLV 310 (483)
Q Consensus 234 ~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~---~~~~~ 310 (483)
++|.||++.++...+ ..+.......- .+| |+ +++|.+| .|+.+|.+++ .+++.+.+.... +....
T Consensus 780 llI~DEV~tGfGRtG-~~~~a~e~~gv-----~PD--iv--t~gK~lg-~G~Pl~av~~-~~~i~~~~~~~~~~~sT~~g 847 (972)
T PRK06149 780 VCIADEVQVGYGRLG-HYFWGFEQQGV-----VPD--II--TMAKGMG-NGHPLGAVIT-RREIAEALEAEGYFFSSTGG 847 (972)
T ss_pred EEEEEeehhcCCccC-ccchhhhhcCC-----CCC--EE--Eeccccc-CCeeeEEEEE-cHHHHhhhccCCcccCCCCC
Confidence 999999997642232 22223222211 222 32 8899998 8999999999 566666554211 11235
Q ss_pred ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc----CCceeecCCceEEEeeecCchhhc--cChHHHHH
Q 011570 311 SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ----VGIGCLKSNAGLFLWMDLHHLLKE--QTYEAEMA 384 (483)
Q Consensus 311 s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~gi~~~~~~~g~f~~~~l~~~~~~--~~~~~~~~ 384 (483)
++++.+++.+.|+--. + +...+..++.-+++.+.|++ .++......-|+++-+++...... ........
T Consensus 848 nP~~~aaala~L~~i~--~---e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~ 922 (972)
T PRK06149 848 SPVSCRIGMAVLDVLR--E---EKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAA 922 (972)
T ss_pred CHHHHHHHHHHHHHHH--h---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHH
Confidence 6666666555553211 0 01122222222334443433 343323334467777877421100 11112335
Q ss_pred HHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 385 LWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 385 ~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
++..+++ +||.+.+.. ...+.+||.... ++++++++++++|.+++.+
T Consensus 923 i~~~l~~-~Gvl~~~~g----~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 923 ICDRLLE-LGVIMQPTG----DHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred HHHHHHh-CCeEEeecC----CCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 6777775 599998742 124679998865 5999999999999999864
No 331
>PRK06148 hypothetical protein; Provisional
Probab=99.49 E-value=5.6e-11 Score=133.31 Aligned_cols=312 Identities=11% Similarity=0.042 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcC---------
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTG--------- 165 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G--------- 165 (483)
.+....+|+.+.+... -..+.+++++++++|+..+++... .....|+....+|.+.........+
T Consensus 662 ~~~~~~lAe~L~~~~p----~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~ 737 (1013)
T PRK06148 662 HDAIVAYAERLTATLP----DGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGK 737 (1013)
T ss_pred CHHHHHHHHHHHHhCC----CCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCC
Confidence 3445556665554321 123679999999999999986642 2235788888888765432111111
Q ss_pred -----cEEEEeecCCCCCccc-C-------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCcC-CCCHHHHHHHHHHHhhc
Q 011570 166 -----VQLVPVVCDSSNDFKV-T-------MEALEAAYEKAQESNIRIKGVLITNPSNPLGT-FLDRETLKDIVSFINEK 231 (483)
Q Consensus 166 -----~~~~~v~~~~~~~~~~-d-------~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~-~~~~~~l~~i~~~a~~~ 231 (483)
...++.|......|.. + .+.+++.+......+.++.+|++.....-.|. +.+.+.++++.++|+++
T Consensus 738 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~ 817 (1013)
T PRK06148 738 GRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAA 817 (1013)
T ss_pred CCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHh
Confidence 1111111001111221 1 23455555432223345666655533333454 55788899999999999
Q ss_pred CcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh---hhcC
Q 011570 232 NIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM---SSFG 308 (483)
Q Consensus 232 ~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~---~~~~ 308 (483)
|+++|.||+..++...+ ..+.....+.- .+| | -+++|.+| .|+.+|.+++ .+++.+.+..- ...+
T Consensus 818 g~llI~DEVqtGfGRtG-~~~~a~e~~gv-----~PD--i--vt~gK~lg-gG~Plgav~~-~~ei~~~~~~g~~~~~Tf 885 (1013)
T PRK06148 818 GGVCIADEVQVGFGRVG-SHWWAFETQGV-----VPD--I--VTMGKPIG-NGHPMGAVVT-TREIADSFDNGMEYFNTF 885 (1013)
T ss_pred CCEEEEEecccCCCCCC-CcchhhhhcCC-----Ccc--e--eeeccccc-CCcceEEEEE-cHHHHhhccCCCccccCC
Confidence 99999999997742232 21222222211 222 2 27799998 8999999999 56666654321 1112
Q ss_pred CCChHHHHHHHHhcC---ChhHHHHHHHHHHHHHHHHHHHHHHhhhc----CCceeecCCceEEEeeecCchhhcc--Ch
Q 011570 309 LVSSQTQHLIATMLS---DDQFVEKFIAESAKRIAERHKAFTWGLSQ----VGIGCLKSNAGLFLWMDLHHLLKEQ--TY 379 (483)
Q Consensus 309 ~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~gi~~~~~~~g~f~~~~l~~~~~~~--~~ 379 (483)
..++++.+++.+.|+ +++. .+.. ++.-+++.+.|++ +++......-|+++-+++....... ..
T Consensus 886 ~gnpla~aaa~a~L~~i~~e~l-~~~~-------~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~ 957 (1013)
T PRK06148 886 GGNPVSCAIGLAVLDIIEDEDL-QRNA-------LEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPAT 957 (1013)
T ss_pred CCCHHHHHHHHHHHHHHhhccH-HHHH-------HHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccH
Confidence 256666666555543 2221 2222 3333333333333 3332233344677778775321111 11
Q ss_pred HHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 380 EAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 380 ~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
.....+...++ ++||++.+... ..+.+||.... ++++++++++++|.+++.+.
T Consensus 958 ~~~~~i~~~~~-~~Gvl~~~~g~----~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 958 AIARYVKNGAR-ERGILIGTEGP----HDNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred HHHHHHHHHHH-hCCeEEeccCC----CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 11235666666 46999976421 24679999876 59999999999999998753
No 332
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.49 E-value=9e-11 Score=108.92 Aligned_cols=283 Identities=16% Similarity=0.181 Sum_probs=186.7
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCC-CcChH-HHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPY-YPGFD-RDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~-y~~~~-~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
+--.++...++.++.+++..+++|||.|++...+ |+.-. +..+. .|+++..++.+. +-.++++.+.+++.++
T Consensus 68 ~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r-~ga~V~~v~~~~--G~~~~le~i~~~lsqh--- 141 (385)
T KOG2862|consen 68 AQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARR-YGAEVDVVEADI--GQAVPLEEITEKLSQH--- 141 (385)
T ss_pred CceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHh-hCceeeEEecCc--ccCccHHHHHHHHHhc---
Confidence 3456666777899999999999999999987654 54433 44455 499999997765 4468899999999874
Q ss_pred CCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecC
Q 011570 197 NIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSL 276 (483)
Q Consensus 197 ~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~ 276 (483)
++++|++++-...||..-+. +..+-++|++|++++++|.+-+ .++ .+|.- . ++...+....-
T Consensus 142 --~p~~vfv~hgdsSTgV~q~~--~~~~g~lc~k~~~lllVD~VaS---lgg-t~F~m-D---------ewgVDvaytgS 203 (385)
T KOG2862|consen 142 --KPKAVFVTHGDSSTGVLQDL--LAISGELCHKHEALLLVDTVAS---LGG-TEFEM-D---------EWGVDVAYTGS 203 (385)
T ss_pred --CCceEEEEecCccccccchH--HHHHHHHhhcCCeEEEEechhh---cCC-cccee-h---------hhcccEEEecc
Confidence 89999999999999998662 3445567889999999999976 444 33321 1 23444555666
Q ss_pred ccccCCC-CceEEEEEecChHHHHHHHHh--------------hhcCCC-----------ChHHHHHHHHhcCChhHHHH
Q 011570 277 SKDMGFP-GFRVGIIYSYNDQVVSCARKM--------------SSFGLV-----------SSQTQHLIATMLSDDQFVEK 330 (483)
Q Consensus 277 SK~~g~~-GlRiG~li~~~~~l~~~~~~~--------------~~~~~~-----------s~~~q~~~~~~l~~~~~~~~ 330 (483)
-|++|.| |+ +-+.. ++...+.++.. ..+|.+ +....+.+.++|.. ..++
T Consensus 204 QKaL~aP~GL--siisf-S~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~--I~ee 278 (385)
T KOG2862|consen 204 QKALGAPAGL--SIISF-SDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALAL--IAEE 278 (385)
T ss_pred hhhcCCCCCc--ceeec-CHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHH--HHHH
Confidence 8999854 43 34555 34333333321 112222 22222333333332 2234
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCceeecCC----ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC
Q 011570 331 FIAESAKRIAERHKAFTWGLSQVGIGCLKSN----AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP 406 (483)
Q Consensus 331 ~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~----~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~ 406 (483)
-+++..++.++..+++...|+++|++..... ..-.-.+.+|...+.+ ++..++..+++|.+.-|- ++.
T Consensus 279 GL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gvDw~------dVv~~~~~~~~vei~ggl--g~~ 350 (385)
T KOG2862|consen 279 GLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGVDWK------DVVAYAMSHYVVEIGGGL--GPT 350 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCCCHH------HHHHHHHHhcCEEecccc--CCC
Confidence 4667777788888999999999887644211 1112345566554433 677888877777776554 333
Q ss_pred CCCEEEEEecc--CCHHHHHHHHHHHHHHHHHhh
Q 011570 407 NPGWFRVCFAN--MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 407 ~~~~iRis~~~--~~~e~l~~~l~~L~~~l~~~~ 438 (483)
.+..+||++.. .+-+.++..++.|+.++.+..
T Consensus 351 ~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~~ 384 (385)
T KOG2862|consen 351 VGKVFRIGLLGCNANVEYIDNVVELLKLALQRKK 384 (385)
T ss_pred cccEEEEEEeeccCCcHHHHHHHHHHHHHHhhcc
Confidence 45689999833 378899999999988887653
No 333
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.49 E-value=9.5e-11 Score=121.02 Aligned_cols=311 Identities=12% Similarity=0.064 Sum_probs=175.0
Q ss_pred HHHHHHHHHHHhhhCCCC-CcCCCcEEEeCChhHHHHHHHHHhcC-------C-CCeEEEeCCCCcChHHHHhhhcCc--
Q 011570 98 EFRNAVAKFMGKVRGNRI-TFDPDRIVMSGGATGAHETVAFCLAD-------P-GDAFLVPTPYYPGFDRDLRWRTGV-- 166 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~-~~~~~~i~it~G~~~al~~~~~~l~~-------~-gd~Vlv~~P~y~~~~~~~~~~~G~-- 166 (483)
+.+..+|+.+.+...... .-+.+.|++++++++++..++..... + ..+|+...-+|.+.........|.
T Consensus 107 ~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~ 186 (472)
T PRK08742 107 EPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPL 186 (472)
T ss_pred HHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcc
Confidence 445666666654321000 00235899999999999998876421 2 267999998887765333222121
Q ss_pred ----------EEEEeecCCCC--Cccc--------CHHHHHHHHHHHHhcCCceeEEEEeC-CCCCCcC-CCCHHHHHHH
Q 011570 167 ----------QLVPVVCDSSN--DFKV--------TMEALEAAYEKAQESNIRIKGVLITN-PSNPLGT-FLDRETLKDI 224 (483)
Q Consensus 167 ----------~~~~v~~~~~~--~~~~--------d~~~l~~~i~~~~~~~~~~~~i~l~~-P~NPtG~-~~~~~~l~~i 224 (483)
.+..+|..+.. .+.. +++.+++.+.. ...++.+|++.. ..+-.|. +.+.+.++++
T Consensus 187 ~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~iAAvI~EPviqg~gG~~~~p~~fl~~l 263 (472)
T PRK08742 187 YRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQ---SPGEICALILEPRLQCAGGMRMHHPAYLRRA 263 (472)
T ss_pred cccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEccccccCCCcccCCHHHHHHH
Confidence 11222221100 0111 24555665542 223566666553 2555676 5578889999
Q ss_pred HHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHH
Q 011570 225 VSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARK 303 (483)
Q Consensus 225 ~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~ 303 (483)
.++|++||+++|.||+..++...+ . +.....+.- .+| ++ +++|.+| .| +.+|.+++ .+++.+.+..
T Consensus 264 r~lc~~~gillI~DEV~TGfGRtG-~-~~a~e~~gv-----~PD-iv---~~gKgl~-gG~~Plaav~~-~~ei~~~~~~ 330 (472)
T PRK08742 264 RELCDAHGAFLIADEIATGFGRTG-T-LFACEQAGV-----MPD-LL---CLSKGLT-GGFLPLSAVLA-TQQLYDAFLD 330 (472)
T ss_pred HHHHHHcCCEEEEechhhCCCCCc-c-chHHHhcCC-----CCC-EE---EEccccc-CCCCCcceeec-cHHHHHHhhc
Confidence 999999999999999998753333 2 222222211 223 22 5699998 88 49999998 5666555431
Q ss_pred h--------hhcCCCChHHHHHHHHhcC---ChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCc
Q 011570 304 M--------SSFGLVSSQTQHLIATMLS---DDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHH 372 (483)
Q Consensus 304 ~--------~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~ 372 (483)
. ...+..++++.+++.+.|+ +++. .+..++.-++++ .+.+.+.++.+......-|+++-+++..
T Consensus 331 ~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l-~~~~~~~g~~l~----~~~~~~~~~~~i~dvRG~Gl~~giel~~ 405 (472)
T PRK08742 331 DSRERAFLHSHSYTGNPLACAAALATLDIFADDDV-IARNQPTAARMT----QLAAQIGEHPHVADVRQAGMVVAFELTR 405 (472)
T ss_pred cCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHH----HHHHHHhcCCCeeeEeccceEEEEEecc
Confidence 0 1112246666665555543 2221 122222222222 2333344444322233446777787753
Q ss_pred hhhccCh-----HHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 373 LLKEQTY-----EAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 373 ~~~~~~~-----~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
.....+. .....+...++ +.||.+.+. .+.|||.... ++++++++++++|.+++++.
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~-------g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 406 GGNKRTPFPPAARVGLHAYRAAL-ARGVVLRPL-------GDVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred CccccccCCchhHHHHHHHHHHH-HCCeEEEec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2111100 01124555666 469999763 1479999977 59999999999999999764
No 334
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.49 E-value=3.2e-11 Score=132.91 Aligned_cols=310 Identities=14% Similarity=0.133 Sum_probs=185.3
Q ss_pred CCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEe-CChhHHHHHHHHHh----cCCCC----eEEEeCCCCcChHHHHhhhc
Q 011570 94 HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMS-GGATGAHETVAFCL----ADPGD----AFLVPTPYYPGFDRDLRWRT 164 (483)
Q Consensus 94 ~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it-~G~~~al~~~~~~l----~~~gd----~Vlv~~P~y~~~~~~~~~~~ 164 (483)
+|..++...+.+|+.+.+| . +++.+. +|++++....+.++ .++|| +|++++..|+.....+...
T Consensus 538 qG~l~~i~e~q~~l~eltG----~--d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~- 610 (954)
T PRK05367 538 AGYRELIDQLEAWLAEITG----Y--DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMA- 610 (954)
T ss_pred HHHHHHHHHHHHHHHHHHC----C--CCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHC-
Confidence 4567888888899988877 2 345554 45555554433333 35665 5999999998877777775
Q ss_pred CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC
Q 011570 165 GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT 244 (483)
Q Consensus 165 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~ 244 (483)
|.+++.++.+.+ ..+|+++|++++.+. +.++.+|++++|++-.+...+ +++|+++|+++|+++++|.++...
T Consensus 611 G~~vv~v~~d~~--G~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e~~---I~eI~~i~h~~G~~v~VDgA~~~a 682 (954)
T PRK05367 611 GMKVVVVACDEN--GNIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFEET---IREICEIVHEHGGQVYLDGANMNA 682 (954)
T ss_pred CCEEEEECCCCC--CCcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeecCC---HHHHHHHHHHcCCEEEEECcChhh
Confidence 999999998754 479999999998642 235788899999876443456 889999999999999999999532
Q ss_pred ccCCCCCcchHHHhhhhccccCCCeEEEEecCccccC----CCCceEEEEEecChHHHHHHHHhh--------hcCCCC-
Q 011570 245 VFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG----FPGFRVGIIYSYNDQVVSCARKMS--------SFGLVS- 311 (483)
Q Consensus 245 ~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g----~~GlRiG~li~~~~~l~~~~~~~~--------~~~~~s- 311 (483)
...- .+.. ..+-.++..|.+|+|+ ..|--+|++.+. +.+...+.... ..+.++
T Consensus 683 l~~l----~~pg---------~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr-~~l~p~lpg~~v~~~~~~~~~g~v~t 748 (954)
T PRK05367 683 QVGL----ARPG---------DIGADVSHLNLHKTFCIPHGGGGPGVGPIGVK-AHLAPFLPGHPVQIAGGETGIGAVSA 748 (954)
T ss_pred ccCC----CChh---------hcCCCEEEecCcccCCCCcCCCCCceEEEeec-ccccccCCCCccCcCCCCCCcCcchh
Confidence 1111 1111 1234467789999974 234447888873 33322211100 011122
Q ss_pred -hHHHHHHH----HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceE--EEeeecCchhhccChHHHH
Q 011570 312 -SQTQHLIA----TMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGL--FLWMDLHHLLKEQTYEAEM 383 (483)
Q Consensus 312 -~~~q~~~~----~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~--f~~~~l~~~~~~~~~~~~~ 383 (483)
+..|..++ .++...+ .+-+++..+....+.+++.+.|.+. .+.+..+.+.. =+.++++........ ...
T Consensus 749 a~~g~al~~~~a~~yi~~~G--~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~-~~~ 825 (954)
T PRK05367 749 APFGSASILPISWMYIRMMG--AEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKESTGI-TVD 825 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccccCCC-CHH
Confidence 22221111 1111111 1223444444446778888888664 33332221110 012233211111011 134
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 384 ALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 384 ~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
+++++|. ++|+....- .|. .++.+||++.. .+.++++.++++|..+..+..+
T Consensus 826 di~krL~-d~G~~~~t~-~~p--v~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 826 DIAKRLI-DYGFHAPTM-SFP--VAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred HHHHHHH-HCCCeEeec-CCc--cCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 7888886 569875442 243 36789998865 5899999999999988777655
No 335
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.48 E-value=7.9e-11 Score=121.49 Aligned_cols=308 Identities=13% Similarity=0.081 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCcE-------
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGVQ------- 167 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~~------- 167 (483)
.+....+++.+.+..+ -..+.+++++++++++..++.... ....+|+....+|.+.........|..
T Consensus 112 ~~~~~~lae~L~~~~p----~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~ 187 (459)
T PRK06082 112 NETAIECAEKLTEIAG----GELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMG 187 (459)
T ss_pred CHHHHHHHHHHHHhCC----CCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCC
Confidence 3455566666654432 123689999999999999886542 223678888888876543222111211
Q ss_pred -----EEEeecCCC--CCcc-c------CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCc
Q 011570 168 -----LVPVVCDSS--NDFK-V------TMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNI 233 (483)
Q Consensus 168 -----~~~v~~~~~--~~~~-~------d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~ 233 (483)
+..+|.... ..|. . +++.+++.+.+ ..++.+|++....+..+.+.+.+.++++.++|++||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~----~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~ 263 (459)
T PRK06082 188 PLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK----EGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNV 263 (459)
T ss_pred CCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc----CCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 112221110 0011 0 12446665542 1256555555445544557788899999999999999
Q ss_pred EEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHH--hhhcCCC
Q 011570 234 HLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARK--MSSFGLV 310 (483)
Q Consensus 234 ~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~--~~~~~~~ 310 (483)
++|.||+..++ +....+.....+.- .+| ++ +++|.+| .| +.+|.+++. +.+...... ....+..
T Consensus 264 llI~DEV~tG~--GRtG~~fa~e~~gv-----~PD--iv--~~gKgl~-gG~~P~~av~~~-~~i~~~~~~~~~~~T~~g 330 (459)
T PRK06082 264 LLIIDEIPNGM--GRTGEWFTHQAYGI-----EPD--IL--CIGKGLG-GGLVPIAAMITK-DKYNTAAQISLGHYTHEK 330 (459)
T ss_pred EEEEechhhCC--CccchhhHhHhhCC-----CCC--EE--Eeccccc-CCCCcceEEEEc-HHHHhhccCCCCCCCCCc
Confidence 99999999874 32122112122211 223 32 4899998 77 599999984 444433211 1111235
Q ss_pred ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc----CCceeecCCceEEEeeecCchhhc--cChHHHHH
Q 011570 311 SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ----VGIGCLKSNAGLFLWMDLHHLLKE--QTYEAEMA 384 (483)
Q Consensus 311 s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~gi~~~~~~~g~f~~~~l~~~~~~--~~~~~~~~ 384 (483)
++++.+++.+.|+-- ++ ....+++.++-+++.+.|++ +++......-|+++.+++...... ........
T Consensus 331 npl~~aaa~a~L~~l---~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~ 405 (459)
T PRK06082 331 SPLGCAAALATIEVI---EQ--EGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEA 405 (459)
T ss_pred CHHHHHHHHHHHHHH---Hh--cCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHH
Confidence 666655555554321 10 11222333333444444433 343333334456777777531111 11111234
Q ss_pred HHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 385 LWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 385 ~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
+...++ ++||.+.+. ..+.+|++... +++++++++++++.+++.+.
T Consensus 406 ~~~~~~-~~Gvl~~~~------~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~ 452 (459)
T PRK06082 406 VLYRCL-NNGLSFKVS------QGNVIQLSPPLIITREELTQALAILEEAIAKI 452 (459)
T ss_pred HHHHHH-hCCCEEEec------CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 556666 569998763 13579999865 59999999999999999775
No 336
>PRK06105 aminotransferase; Provisional
Probab=99.48 E-value=6.7e-11 Score=122.13 Aligned_cols=310 Identities=13% Similarity=0.053 Sum_probs=172.6
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc------C-CC-CeEEEeCCCCcChHHHHhhhcCcE-
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA------D-PG-DAFLVPTPYYPGFDRDLRWRTGVQ- 167 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~------~-~g-d~Vlv~~P~y~~~~~~~~~~~G~~- 167 (483)
.+.+..+|+.+.+... -..+.+++++++++++..++.... . +| .+|+...-+|.+.........|..
T Consensus 91 ~~~~~~lae~L~~~~p----~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~ 166 (460)
T PRK06105 91 HGPVIDLAEKLVAMAP----VPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPN 166 (460)
T ss_pred CHHHHHHHHHHHHhCC----CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcc
Confidence 3444556666654422 234689999999999999987742 1 22 578888888866543221111111
Q ss_pred -----------EEEeecCCCCCcc-----------cCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHH
Q 011570 168 -----------LVPVVCDSSNDFK-----------VTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDI 224 (483)
Q Consensus 168 -----------~~~v~~~~~~~~~-----------~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i 224 (483)
+..++.+....+. ...+++++.+... ...++.+|++.....-.|.+ .+.+.++++
T Consensus 167 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG~~~~~~~yl~~l 244 (460)
T PRK06105 167 NHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAE--GPDTIAAFIGEPVMGAGGVIVPPKTYWEKI 244 (460)
T ss_pred cccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccCCCCCccCCHHHHHHH
Confidence 1112211100000 0134566665421 11356666555445555765 588889999
Q ss_pred HHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHH
Q 011570 225 VSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARK 303 (483)
Q Consensus 225 ~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~ 303 (483)
.++|++||+++|.||++.++...+ . +.....+.- .+| | -++||.+| .| +.+|.+++ ++.+.+.+..
T Consensus 245 r~lc~~~~~llI~DEv~tG~GRtG-~-~f~~~~~~v-----~PD--i--~~~gK~lg-gG~~P~~av~~-~~~i~~~~~~ 311 (460)
T PRK06105 245 QAVLRKYDILLVADEVICGFGRTG-N-MFGCETFGI-----KPD--I--LVMSKQLS-SSYQPLSAVLM-NEKVYDPIAD 311 (460)
T ss_pred HHHHHHcCCeEEEeccccCCCcCc-h-hhhHHhcCC-----CCC--e--eeeecccc-cCcccceEEEE-cHHHHHHHhc
Confidence 999999999999999997642232 2 222222211 223 2 27899998 66 69999999 5666665532
Q ss_pred h---------hhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc---CCceeecCCceEEEeeecC
Q 011570 304 M---------SSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ---VGIGCLKSNAGLFLWMDLH 371 (483)
Q Consensus 304 ~---------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~---~gi~~~~~~~g~f~~~~l~ 371 (483)
. ...+..++++.+++.+.|+-- ++ ....+..++.-+++.+.|++ +++......-|++.-+++.
T Consensus 312 ~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i---~~--~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~ 386 (460)
T PRK06105 312 ESGKIGTFGHGFTASGHPVAAAVALENLAII---EE--RDLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELV 386 (460)
T ss_pred ccccCcccccCCCCCCCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEe
Confidence 1 111235666666555544321 10 11122233333334443433 3332223334567667763
Q ss_pred chhhcc-C----hHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 372 HLLKEQ-T----YEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 372 ~~~~~~-~----~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
...... . ......+...++ ++||.+.+. .+.+|++... ++++++++++++|.+++++..
T Consensus 387 ~~~~~~~~~~~~~~~a~~i~~~~~-~~Gvl~~~~-------g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (460)
T PRK06105 387 ADKATKTPFEPPGKVGARANAAAH-EHGVISRAM-------GDTLAFCPPLIITAAQVDEMVDRFGRALDDVA 451 (460)
T ss_pred cCcccCCCCCchhHHHHHHHHHHH-HCCeEEEec-------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 211100 0 011235566666 569999763 1379999876 599999999999999997653
No 337
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.48 E-value=5.9e-11 Score=121.32 Aligned_cols=306 Identities=11% Similarity=0.079 Sum_probs=170.1
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHH---HhhhcCcEEEEee
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVV 172 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~ 172 (483)
+.+..+|+.+.+..+ ...+.+.+++++++++..++.... ....+|+...-+|.+.... .....+......+
T Consensus 93 ~~~~~la~~L~~~~~----~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~ 168 (433)
T PRK00615 93 EQEILFAEELFSYLG----LEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLT 168 (433)
T ss_pred HHHHHHHHHHHHhCC----CCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCC
Confidence 345556666654422 223689999999999999887642 1235788888888775421 0001011000000
Q ss_pred ----cCC--CC----CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHhhcCcEEEEcccc
Q 011570 173 ----CDS--SN----DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIY 241 (483)
Q Consensus 173 ----~~~--~~----~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay 241 (483)
... .. .| -|++.+++.+.+. +.++.+|++.......|.+. +.+.+++|.++|++||+++|.||++
T Consensus 169 ~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~---~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~ 244 (433)
T PRK00615 169 HLVDTDLAHPLTLSLPY-NDFQIFQTVMNSL---GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVV 244 (433)
T ss_pred CCCCCCCCCCCeEeCCC-CCHHHHHHHHHhc---CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 000 00 01 2678888888642 23455555544355567755 5778999999999999999999999
Q ss_pred ccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh-----cCCCChHHHH
Q 011570 242 AATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS-----FGLVSSQTQH 316 (483)
Q Consensus 242 ~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~-----~~~~s~~~q~ 316 (483)
.++ ..+ .. .. ..... . .+| ++ +|+|.+| .|+.+|++++ ++++.+.+..... .+..++++.+
T Consensus 245 tG~-R~G-~~-ga-~~~~g-v---~PD--i~--~~gK~lg-gG~p~~av~~-~~~i~~~~~~~~~~~~~~T~~g~p~~~a 310 (433)
T PRK00615 245 TGF-RVA-QG-GA-AAIYH-V---KPD--IT--VYGKILG-GGLPAAAVVA-HKSIMDHLAPEGTIFQAGTLSGNPLAMA 310 (433)
T ss_pred ccc-ccc-Hh-HH-HHhcC-C---CCC--eE--EEccccc-CCcceeeeee-cHHHHhhhcCCCCcccCCCCcccHHHHH
Confidence 764 233 21 11 12111 0 222 32 5899998 7899999999 5666665532111 1123555555
Q ss_pred HHHHhcC---ChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchh----hc---cChHHHHHHH
Q 011570 317 LIATMLS---DDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLL----KE---QTYEAEMALW 386 (483)
Q Consensus 317 ~~~~~l~---~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~----~~---~~~~~~~~~~ 386 (483)
++.+.|+ +++. .+.+.++-+.+ ++.+.+.+.+.|+.+.....|.++.+.+.... .. ........+.
T Consensus 311 a~la~L~~i~~~~~-~~~~~~~g~~l---~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (433)
T PRK00615 311 AGKASINLCREQGF-YTQLSTLEQNF---LSPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFY 386 (433)
T ss_pred HHHHHHHHHhcccH-HHHHHHHHHHH---HHHHHHHHHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHH
Confidence 5444443 2221 12222222222 22234444444554332224567777774321 00 0112234677
Q ss_pred HHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 387 RVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 387 ~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
..+++ +||.+.|... . .+ =++.. .++++++++++++.+++++.
T Consensus 387 ~~l~~-~Gv~~~~~~~-~----~~-~ls~~-ht~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 387 QSAFS-KGVYLSPSPF-E----AS-FLSSA-HSMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred HHHHH-CCeeecCccc-c----cc-ceecC-CCHHHHHHHHHHHHHHHHHH
Confidence 77775 5999887542 1 11 14444 59999999999999999874
No 338
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.48 E-value=1.2e-10 Score=120.31 Aligned_cols=308 Identities=12% Similarity=0.075 Sum_probs=173.4
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-------CCC-CeEEEeCCCCcChHHHHhhhcCc---
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-------DPG-DAFLVPTPYYPGFDRDLRWRTGV--- 166 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-------~~g-d~Vlv~~P~y~~~~~~~~~~~G~--- 166 (483)
+....+|+.+.+... ...+.+++++++++++..++.... .+| .+|+....+|.+.........|.
T Consensus 99 ~~~~~lae~L~~~~p----~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~ 174 (460)
T PRK06916 99 VPSILLAEKLIEVVP----EGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLF 174 (460)
T ss_pred HHHHHHHHHHHHhCC----CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCccc
Confidence 344555555554321 123689999999999999887643 133 67899999887754332221121
Q ss_pred ---------EEEEeecCCC--CCcc--------cCHHHHHHHHHHHHhcCCceeEEEEeC-CCCCCcCC-CCHHHHHHHH
Q 011570 167 ---------QLVPVVCDSS--NDFK--------VTMEALEAAYEKAQESNIRIKGVLITN-PSNPLGTF-LDRETLKDIV 225 (483)
Q Consensus 167 ---------~~~~v~~~~~--~~~~--------~d~~~l~~~i~~~~~~~~~~~~i~l~~-P~NPtG~~-~~~~~l~~i~ 225 (483)
.+..+|.... ..+. -+++.+++.++. .+.++.+|++.- ...-.|.+ .+.+.++++.
T Consensus 175 ~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr 251 (460)
T PRK06916 175 HQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLR 251 (460)
T ss_pred ccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHHHHHHHH
Confidence 1122222110 0011 134556666542 234676666664 35556765 5888999999
Q ss_pred HHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHH-
Q 011570 226 SFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARK- 303 (483)
Q Consensus 226 ~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~- 303 (483)
++|+++|+++|.||+..++...+ .+.....+.- .+| |+ +++|.+| .| +.+|.+++ .+++.+.+..
T Consensus 252 ~lc~~~g~llI~DEV~TG~GRtG--~~~a~~~~gv-----~PD--iv--~~gK~l~-gG~~Pi~av~~-~~ei~~~~~~~ 318 (460)
T PRK06916 252 NLCTKYNVLFITDEVATGFGRTG--KMFACEHENV-----TPD--IM--TAGKGLT-GGYLPIAITVT-TDEIYNAFYGD 318 (460)
T ss_pred HHHHHcCCEEEeechhhCCCcCc--hhhHHHhcCC-----CCC--ee--eeehhhh-cCccccceeee-cHHHHHHhhcc
Confidence 99999999999999997742222 2222222211 223 22 6799998 88 59999999 4556554421
Q ss_pred -------hhh-cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC---CceeecCCceEEEeeecCc
Q 011570 304 -------MSS-FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV---GIGCLKSNAGLFLWMDLHH 372 (483)
Q Consensus 304 -------~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~---gi~~~~~~~g~f~~~~l~~ 372 (483)
... .+..++++.+++.+.|+- +++ ....+++++.-+++.+.|+++ .+......-|+++-+++..
T Consensus 319 ~~~~~~~~~~~T~~gnpl~~aaa~a~l~~---l~~--~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~ 393 (460)
T PRK06916 319 YEEQKTFFHGHSYTGNPLGCAVALANLEL---YEK--TNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVK 393 (460)
T ss_pred ccccCccccCCCCCCCHHHHHHHHHHHHH---HHh--ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeec
Confidence 011 122466666555555432 110 112223333334444444432 2211222335666676642
Q ss_pred hhhcc-----ChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 373 LLKEQ-----TYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 373 ~~~~~-----~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
..... .......+...++ ++||++.+.. +.+|+.... ++++++++++++|.+++++..
T Consensus 394 ~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~g-------~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 394 NKETKEPFEWTERVGVQVCKRSR-ELGMLTRPLG-------NTIVFMPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred ccccccCCCchhhHHHHHHHHHH-HCCeEEEecC-------CEEEEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 11100 0011235566666 4699997631 368988665 599999999999999997653
No 339
>PRK07036 hypothetical protein; Provisional
Probab=99.48 E-value=1.3e-10 Score=120.16 Aligned_cols=321 Identities=10% Similarity=0.044 Sum_probs=179.0
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc------C-C-CCeEEEeCCCCcChHHHHhhhcCc--
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA------D-P-GDAFLVPTPYYPGFDRDLRWRTGV-- 166 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~------~-~-gd~Vlv~~P~y~~~~~~~~~~~G~-- 166 (483)
.+.+..+|+.+..... -..+.|++++++++++..++.... . + ..+|+...-+|.+....+....|.
T Consensus 94 ~~~~~~lae~L~~~~p----~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~ 169 (466)
T PRK07036 94 NAPAAELAAKLAELAP----GDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAA 169 (466)
T ss_pred CHHHHHHHHHHHHhCC----CCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCc
Confidence 4556667776665421 224689999999999999887641 1 2 267888888887754332211111
Q ss_pred ----------EEEEeecCCC--CCcccC--------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHHH
Q 011570 167 ----------QLVPVVCDSS--NDFKVT--------MEALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDIV 225 (483)
Q Consensus 167 ----------~~~~v~~~~~--~~~~~d--------~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~ 225 (483)
.+..++.+.. ..+..+ ++.+++.+.. ....++.+|++.....-.|.+ .+.+.++++.
T Consensus 170 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr 247 (466)
T PRK07036 170 DRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGSGGVIVPPPGYHARMR 247 (466)
T ss_pred ccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCCCCCccCCHHHHHHHH
Confidence 1222222110 011111 2334444432 112356666666445556764 5778899999
Q ss_pred HHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh
Q 011570 226 SFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM 304 (483)
Q Consensus 226 ~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~ 304 (483)
++|++||+++|.||+..++...+ .+........ . .+| |+ +++|.+| .| +.+|.+++ .+++.+.+...
T Consensus 248 ~lc~~~g~llI~DEV~tGfGRtG--~~~~~~~~~g-v---~PD--iv--t~gK~l~-gG~~Pi~av~~-~~~i~~~~~~~ 315 (466)
T PRK07036 248 EICRRYDILYISDEVVTGFGRLG--HFFASEAVFG-I---QPD--II--TFAKGLT-SGYQPLGAVII-SERLLDVISGP 315 (466)
T ss_pred HHHHHcCCEEEEeechhCCCcCc--hhhhhhhhcC-C---CCC--EE--EEccccc-cCccccEEEEE-cHHHHHHHhcc
Confidence 99999999999999997742222 1222221111 0 223 22 7799998 88 59999998 56666655321
Q ss_pred --------h-hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhh---hcCCceeecCCceEEEeeecCc
Q 011570 305 --------S-SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGL---SQVGIGCLKSNAGLFLWMDLHH 372 (483)
Q Consensus 305 --------~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L---~~~gi~~~~~~~g~f~~~~l~~ 372 (483)
. ..+..++++.+++.+.|+.- ++ ....+..++.-+++.+.| .++++......-|+++.+++..
T Consensus 316 ~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i---~~--~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~ 390 (466)
T PRK07036 316 NAKGNVFTHGFTYSGHPVACAAALKNIEIM---ER--EGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVA 390 (466)
T ss_pred cCcCcccccCCCCCCCHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEcc
Confidence 1 01224666666655554321 10 111222233333333333 3334333333446777787743
Q ss_pred hhhcc-----ChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhhccCccch
Q 011570 373 LLKEQ-----TYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVEAKVPNKK 446 (483)
Q Consensus 373 ~~~~~-----~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~~~~~~~~ 446 (483)
..... .......+...++ ++||++.+.. +.+|++... ++++++++++++|.+++++..+ ..++
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~-------~~~~l~Ppl~it~~~id~~~~~l~~al~~~~~---~~~~ 459 (466)
T PRK07036 391 DKGSKALLPEDIAIGQRIDRHCQ-ERGLLVRPLE-------HLCVLSPPLIITRAQIDEIVAILRAAIEETAD---ELAA 459 (466)
T ss_pred CccccCCCCchhHHHHHHHHHHH-HCCcEEeecC-------CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHH---HHHh
Confidence 21111 0011234566666 5699987631 368898765 5999999999999999987633 3455
Q ss_pred hhccc
Q 011570 447 KLCWQ 451 (483)
Q Consensus 447 ~~~~~ 451 (483)
++-|.
T Consensus 460 ~~~~~ 464 (466)
T PRK07036 460 HGLWR 464 (466)
T ss_pred ccccC
Confidence 55564
No 340
>PRK07046 aminotransferase; Validated
Probab=99.47 E-value=6.3e-11 Score=121.87 Aligned_cols=301 Identities=14% Similarity=0.090 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhh-cCcEEE----
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWR-TGVQLV---- 169 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~-~G~~~~---- 169 (483)
.+....+|+.+.+.. ..+.+.++++++++...+++... ...++|+...-+|.+........ .+.+..
T Consensus 114 ~~~~~~lAe~l~~~~------~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~ 187 (453)
T PRK07046 114 SEDAAWVGEELARRF------GLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPG 187 (453)
T ss_pred CHHHHHHHHHHHHHh------CCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCC
Confidence 345555666665432 25789999999999998886642 23467898888888864322110 010000
Q ss_pred --Eee--cCC---CCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHHHHHHhhcCcEEEEcccc
Q 011570 170 --PVV--CDS---SNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDIVSFINEKNIHLVCDEIY 241 (483)
Q Consensus 170 --~v~--~~~---~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~~~a~~~~~~iI~Deay 241 (483)
.++ ... .-.|. |++.+++.+.. .++.+|++.-...-.|.+ .+.+.++++.++|++||+++|.||+.
T Consensus 188 ~~g~~~~~~~~~~~~~~n-d~~~l~~~l~~-----~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~ 261 (453)
T PRK07046 188 LLGQVHDLTATTRVVEFN-DLAALEAALAD-----GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETH 261 (453)
T ss_pred CCCCCccccCceEeeCCC-CHHHHHHHhCC-----CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccc
Confidence 000 000 00121 78888887731 256655554334334544 45678999999999999999999998
Q ss_pred ccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh------h-----hcCCC
Q 011570 242 AATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM------S-----SFGLV 310 (483)
Q Consensus 242 ~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~------~-----~~~~~ 310 (483)
. +-.+- .. ...... . .+| ++ +++|.+| .|+.+|.+++ ++++.+.+... . .-+..
T Consensus 262 t-fr~g~-Gg---~~~~~g-v---~PD--i~--t~gK~lg-gG~Pi~av~g-~~~i~~~~~~~~~~~~~~~~~~~~T~~g 326 (453)
T PRK07046 262 T-ISSGP-GG---YTRAHG-L---EPD--FL--VVGKPIA-GGVPCAVYGF-SAELAERAQAAKASAPPGHSGIGTTLSA 326 (453)
T ss_pred c-CccCC-cc---hhHHhC-C---Ccc--ce--eehhhhc-CCCcceeeee-hHHHHHHHhhccccCCCCCceeCCCCcc
Confidence 6 22211 11 111111 0 222 22 6899998 8999999998 56666665421 0 01224
Q ss_pred ChHHHHHHHHhcC---ChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCc-hh-hc------cCh
Q 011570 311 SSQTQHLIATMLS---DDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHH-LL-KE------QTY 379 (483)
Q Consensus 311 s~~~q~~~~~~l~---~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~-~~-~~------~~~ 379 (483)
++++.+++.+.|+ +++. .+...+.-+.+ ++.+.+.+.+.++.+....-|..+.+.+.. .. +. ...
T Consensus 327 npl~~aa~~a~L~~l~~~~~-~~~~~~~g~~l---~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~ 402 (453)
T PRK07046 327 NALAMAAMRATLAEVMTEAA-YAHMLALAARL---AAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDP 402 (453)
T ss_pred cHHHHHHHHHHHHHHhcccH-HHHHHHHHHHH---HHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCH
Confidence 5666555544443 3222 12222222222 233333334456543322222333444321 10 00 011
Q ss_pred HHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 380 EAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 380 ~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
.....++..+++ +||.+.|.. +.++++.. +++++++++++++.+++++.
T Consensus 403 ~~~~~~~~~~~~-~Gv~~~~~~-------~~~~~~p~-~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 403 ELEAALHLYLLN-RGVLITPFH-------NMMLVCPA-TTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred HHHHHHHHHHHH-CCCEEeccc-------CcEEEeCC-CCHHHHHHHHHHHHHHHHHH
Confidence 112345666665 599987621 34788876 79999999999999998754
No 341
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.47 E-value=1.4e-10 Score=119.85 Aligned_cols=308 Identities=12% Similarity=0.038 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc------C-C-CCeEEEeCCCCcChHHHHhhhcCc--
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA------D-P-GDAFLVPTPYYPGFDRDLRWRTGV-- 166 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~------~-~-gd~Vlv~~P~y~~~~~~~~~~~G~-- 166 (483)
.+.+..+|+.+.+... ...+.+++++++++++..++.... . + ..+|+...-+|.+.........|.
T Consensus 89 ~~~~~~lae~L~~~~p----~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~ 164 (466)
T PRK07030 89 HEPVIELSERLVKITP----PGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVAL 164 (466)
T ss_pred CHHHHHHHHHHHHhCC----CCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCcc
Confidence 3455556666654321 234689999999999999987652 1 2 357888888887754332221121
Q ss_pred ----------EEEEeecCCCC--Cccc--------CHHHHHHHHHHHHhcCCceeEEEEeC-CCCCCcC-CCCHHHHHHH
Q 011570 167 ----------QLVPVVCDSSN--DFKV--------TMEALEAAYEKAQESNIRIKGVLITN-PSNPLGT-FLDRETLKDI 224 (483)
Q Consensus 167 ----------~~~~v~~~~~~--~~~~--------d~~~l~~~i~~~~~~~~~~~~i~l~~-P~NPtG~-~~~~~~l~~i 224 (483)
.+..+|..... .+.. +++.+++.+.+ .+.++.+|++.- ...-.|. +.+.+.++++
T Consensus 165 ~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~---~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~l 241 (466)
T PRK07030 165 FTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAE---HHDEIAAVIVEPLIQGAGGMRMYHPVYLKLL 241 (466)
T ss_pred ccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEecccccCCCcccCCHHHHHHH
Confidence 11222221100 0111 24556666642 234666666654 2444566 4577889999
Q ss_pred HHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHH
Q 011570 225 VSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARK 303 (483)
Q Consensus 225 ~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~ 303 (483)
.++|++||+++|.||+..++...+ . +.....+.- .+| ++ +++|.+| .| +.+|.+++ ++++.+.+..
T Consensus 242 r~lc~~~g~llI~DEV~TGfGRtG-~-~~a~~~~gv-----~PD-iv---~~gKgl~-gG~~Pi~av~~-~~ei~~~~~~ 308 (466)
T PRK07030 242 REACDRYGVHLIHDEIAVGFGRTG-T-MFACEQAGI-----RPD-FL---CLSKALT-GGYLPLAAVLT-TDTVYQAFYD 308 (466)
T ss_pred HHHHHHcCCEEEEeehhhCcCccc-c-chHHHhcCC-----CCC-EE---eeehhcc-CCcccceEEEe-cHHHHHHHhc
Confidence 999999999999999998743333 2 222222211 223 22 5699998 89 59999999 5666655421
Q ss_pred ---------hhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc---CCceeecCCceEEEeeecC
Q 011570 304 ---------MSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ---VGIGCLKSNAGLFLWMDLH 371 (483)
Q Consensus 304 ---------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~---~gi~~~~~~~g~f~~~~l~ 371 (483)
....+..++++.+++.+.|+--. + +...++.++.-+++.+.|++ .........-|+++-+++.
T Consensus 309 ~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~--~---~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~ 383 (466)
T PRK07030 309 DYPTLRAFLHSHSYTGNPLACAAALATLDIFE--Q---DNVIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMV 383 (466)
T ss_pred ccccccccccCCCCCCCHHHHHHHHHHHHHHH--h---cCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEec
Confidence 01112356676666655543211 0 01112222233333333333 3221222334577777774
Q ss_pred chhhc-----cChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 372 HLLKE-----QTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 372 ~~~~~-----~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
..... ........+...++ ++||.+.+. .+.+|+.... ++++++++++++|.+++++.
T Consensus 384 ~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~-------g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 384 QDKASKTPYPWQERRGLKVYQHAL-ERGALLRPL-------GSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred cCccccccCcchhHHHHHHHHHHH-HCCeEEEec-------CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 31110 00011125666666 469998763 1369998765 59999999999999999887
No 342
>PRK07481 hypothetical protein; Provisional
Probab=99.47 E-value=1.5e-10 Score=119.34 Aligned_cols=312 Identities=14% Similarity=0.047 Sum_probs=172.1
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC-------CC-CeEEEeCCCCcChHHHHhhhcCc--
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD-------PG-DAFLVPTPYYPGFDRDLRWRTGV-- 166 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~P~y~~~~~~~~~~~G~-- 166 (483)
.+.+..+|+.+.+..+ +-..+.+++++++++++..++..... +| .+|+...-+|.+.........|.
T Consensus 85 ~~~~~~lae~L~~~~~---~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~ 161 (449)
T PRK07481 85 HPRAIELSYELIDMFA---PEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTV 161 (449)
T ss_pred CHHHHHHHHHHHHhcC---CCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcc
Confidence 3455566666654431 01246899999999999998876421 23 57888888887754322211111
Q ss_pred ----------EEEEeecCC--CCCcc-cCHHHHHHHHHHH----H--hcCCceeEEEEeCCCCCCcCC-CCHHHHHHHHH
Q 011570 167 ----------QLVPVVCDS--SNDFK-VTMEALEAAYEKA----Q--ESNIRIKGVLITNPSNPLGTF-LDRETLKDIVS 226 (483)
Q Consensus 167 ----------~~~~v~~~~--~~~~~-~d~~~l~~~i~~~----~--~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~~ 226 (483)
.+..++.+. ...|. -|++.+++.+.+. - ....++.+|++.....-.|.+ .+.+.++++.+
T Consensus 162 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~ 241 (449)
T PRK07481 162 FRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVRE 241 (449)
T ss_pred cccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHH
Confidence 112222111 01122 2444443332211 0 112356666665445555764 57778999999
Q ss_pred HHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh-
Q 011570 227 FINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM- 304 (483)
Q Consensus 227 ~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~- 304 (483)
+|++||+++|.||+..++...+ . ......+.- .+| |+ +++|.+| .| +.+|.+++ .+++.+.+...
T Consensus 242 lc~~~g~llI~DEV~tGfGRtG-~-~~a~~~~gv-----~PD--iv--~~gKgl~-gG~~Pi~av~~-~~~i~~~~~~~~ 308 (449)
T PRK07481 242 VCDRHGILLIADEVVTGFGRTG-S-WFGSRGWGV-----KPD--IM--CLAKGIT-SGYVPLGATMV-NARIADAFEANA 308 (449)
T ss_pred HHHHcCCEEEEeehhhCcCcCc-h-hhHhhhcCC-----CCC--EE--EEeeccc-CCCcCceEEEE-cHHHHHHHhccC
Confidence 9999999999999998742222 2 112111110 223 22 6699998 78 59999999 55666655321
Q ss_pred -------h-hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc----CCceeecCCceEEEeeecCc
Q 011570 305 -------S-SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ----VGIGCLKSNAGLFLWMDLHH 372 (483)
Q Consensus 305 -------~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~gi~~~~~~~g~f~~~~l~~ 372 (483)
. ..+..++++.+++.+.|+--. + ....++.++.-+++.+.|++ +++......-|+++.+++..
T Consensus 309 ~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~ 383 (449)
T PRK07481 309 DFGGAIMHGYTYSGHPVACAAALATLDIVV--R---EDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVA 383 (449)
T ss_pred ccccccccCCCCCCCHHHHHHHHHHHHHHH--h---hhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecc
Confidence 1 112246666666555543211 0 11122223333334444433 34333333445777777743
Q ss_pred hhhcc---C--hHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 373 LLKEQ---T--YEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 373 ~~~~~---~--~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
..... . ......+...++ +.||++.+.. +.+||+... ++++++++++++|.+++++.
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~g-------~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 384 DKATREPIDPSKGYANAVADVAR-ENGVLVRPSG-------TKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred cccccCCCCchhHHHHHHHHHHH-hCCeEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 11000 0 111234556666 4699997641 258999765 59999999999999998754
No 343
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.47 E-value=3.4e-11 Score=120.24 Aligned_cols=265 Identities=18% Similarity=0.145 Sum_probs=161.5
Q ss_pred CCcEEEeCChhHHHHHHHHHhc-CCC-CeEEEeCCCCcChHHHHhhhcC-------cE-----EEEeecCCCCCcccCHH
Q 011570 119 PDRIVMSGGATGAHETVAFCLA-DPG-DAFLVPTPYYPGFDRDLRWRTG-------VQ-----LVPVVCDSSNDFKVTME 184 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~-~~g-d~Vlv~~P~y~~~~~~~~~~~G-------~~-----~~~v~~~~~~~~~~d~~ 184 (483)
.+.+++++++++++..++.... .+| ++|+....+|.+.........+ .. +..+| |. |++
T Consensus 81 ~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~------~~-d~~ 153 (364)
T PRK04013 81 YEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIP------FN-DVE 153 (364)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEec------CC-CHH
Confidence 3689999999999999987652 245 8899999988775433322111 11 11122 11 577
Q ss_pred HHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhcc
Q 011570 185 ALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDI 263 (483)
Q Consensus 185 ~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~ 263 (483)
.+++.+.+ ++++|++.......|.. .+.+.++++.++|++||+++|.||+..++ ..+ .+.....+.-
T Consensus 154 ~l~~~i~~------~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG--~~~a~~~~gv--- 221 (364)
T PRK04013 154 AAKEAITK------ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTG--KFLAIEHYKV--- 221 (364)
T ss_pred HHHHHhcC------CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCC--chhHHHhcCC---
Confidence 78877742 67777776555555654 46788999999999999999999999875 333 2223222211
Q ss_pred ccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHH
Q 011570 264 ACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERH 343 (483)
Q Consensus 264 ~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~ 343 (483)
. +.++ +++|.+| .|+.+|.++...+ +.. . .....+..++.+.+++.+.|+--.. ++.+++.++.
T Consensus 222 --~-PDiv---~~gK~lg-gG~P~~a~~~~~~-~~~-~-~~~~T~~gnp~~~aaa~a~l~~i~~-~~l~~~~~~~----- 285 (364)
T PRK04013 222 --E-PDIV---TMGKGIG-NGVPVSLTLTNFD-VER-G-KHGSTFGGNPLACKAVAVTLRILRR-ERLVEKAGEK----- 285 (364)
T ss_pred --C-CCEE---Eeccccc-CCceeEEEEeccc-ccC-C-CcCCCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHH-----
Confidence 2 2222 6699998 7899999988543 311 1 1111123566666665555432110 0111221111
Q ss_pred HHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHH
Q 011570 344 KAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRT 422 (483)
Q Consensus 344 ~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~ 422 (483)
+ ..+.. .+-.....-|+++-+++... ...+...++ ++||.+.+. +.+.+|+.... +++++
T Consensus 286 --l-~~l~~-~~v~~vRG~Gl~~gve~~~~--------~~~i~~~~~-~~Gll~~~~------g~~vlr~~Ppl~it~~~ 346 (364)
T PRK04013 286 --F-IEIKG-ERVVTTRGRGLMIGIVLKKP--------VGKYVEELQ-NRGYLVHTA------GQRVIRLLPPLIISKDT 346 (364)
T ss_pred --H-HHhcc-CcceeeeeCcEEEEEEeCCc--------HHHHHHHHH-hCCcEEeeC------CCCEEEEeCCcccCHHH
Confidence 1 12221 11111223467888888531 124566666 469998753 23679999976 59999
Q ss_pred HHHHHHHHHHHHHHh
Q 011570 423 MEIALSRITSFMLKN 437 (483)
Q Consensus 423 l~~~l~~L~~~l~~~ 437 (483)
+++++++|.+++++.
T Consensus 347 i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 347 MEEAKSAIEGVINDI 361 (364)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998753
No 344
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.45 E-value=2.2e-11 Score=131.16 Aligned_cols=317 Identities=16% Similarity=0.170 Sum_probs=189.0
Q ss_pred cccccCCC---CCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh----cCCC----CeEEEeCCCC
Q 011570 85 KGIAIFQD---YHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL----ADPG----DAFLVPTPYY 153 (483)
Q Consensus 85 ~~~~~Y~~---~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l----~~~g----d~Vlv~~P~y 153 (483)
.+.+.|.+ .+|+.++...+.+++.+..| .+.-.+...+|+ ++....+.++ ..+| ++|+++.-.|
T Consensus 527 ~t~hPyqp~e~sQG~lq~i~elq~~l~eLtG----md~~Sl~p~sGA-~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saH 601 (954)
T PRK12566 527 AQLHPFAPREQAEGYRAMIDELEAWLCAITG----FDAICMQPNSGA-QGEYAGLLAIRRYHRSRGQSQRDICLIPSSAH 601 (954)
T ss_pred hcCCCCCchhhhcCHHHHHHHHHHHHHHHHC----CCeEeecCCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEeccccc
Confidence 34567877 77888888888888888877 233344444443 4443343333 2222 5778888777
Q ss_pred cChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCc
Q 011570 154 PGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNI 233 (483)
Q Consensus 154 ~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~ 233 (483)
+.....+... |.+++.++.++++ .+|+++|++++.+. +.++.+|++++|++-++. .+.+++|+++|+++|.
T Consensus 602 gtNpasa~~~-GieVv~Vp~D~~G--~iDle~L~a~I~~~---~~~laaVmiT~Pnt~Gv~---e~~V~eI~~iah~~Ga 672 (954)
T PRK12566 602 GTNPASAQMA-GMRVVIVECDPDG--NVDLDDLKAKAAAA---GDRLSCLMITYPSTHGVY---EEGIREICEVVHQHGG 672 (954)
T ss_pred ccCHHHHHHC-CCEEEEeccCCCC--CcCHHHHHHHhhcc---CCCEEEEEEEecCcCcee---cchHHHHHHHHHHcCC
Confidence 5544555554 9999999997544 79999999998632 237788888888875433 3559999999999999
Q ss_pred EEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccC----CCCceEEEEEecChHHHHHHHHhh--h-
Q 011570 234 HLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG----FPGFRVGIIYSYNDQVVSCARKMS--S- 306 (483)
Q Consensus 234 ~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g----~~GlRiG~li~~~~~l~~~~~~~~--~- 306 (483)
++++|.+... .. ....... ..+..++++++.|+|+ ..|.-+|.+.+ .+.+...+..+. .
T Consensus 673 lv~vDgA~~~---a~-~~l~~Pg---------~~GADi~~~s~HKtf~~P~G~GGP~vG~iav-~~~L~pfLp~~P~~d~ 738 (954)
T PRK12566 673 QVYMDGANLN---AQ-VGLARPA---------DIGADVSHMNLHKTFCIPHGGGGPGMGPIGV-RAHLAPFVANHPVVPV 738 (954)
T ss_pred EEEEEeeChh---hc-cCCCChh---------hcCCCEEEecCCcccCcCccCCCCccchhhh-hhhhhhhccCCCCcCC
Confidence 9999999852 11 1112122 2355688899999885 22444565544 233333332211 0
Q ss_pred ------cCCCCh------HHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEE--EeeecC
Q 011570 307 ------FGLVSS------QTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLF--LWMDLH 371 (483)
Q Consensus 307 ------~~~~s~------~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f--~~~~l~ 371 (483)
.+.++. ....++..++...+. + +.+.......+.+++.+.|.+. ++.+.++.+-+| +.++++
T Consensus 739 ~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~--e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~~hEfii~~~ 815 (954)
T PRK12566 739 EGPDPNNGAVSAAPWGSASILPISWMYIAMMGP--Q-LADASEVAILSANYLANQLGGAFPVLYRGRNERVAHECILDLR 815 (954)
T ss_pred CCCCCCCCceeecccchHHHHHHHHHHHHHHCH--H-HHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeEEEEEcc
Confidence 011111 111122222332221 2 3444444455778888888763 444432222211 122333
Q ss_pred chhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 372 HLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 372 ~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
...+... .+..+++++|+ ++||..-- ..|. ..+++|++... .+++++++++++|+.+.++.
T Consensus 816 ~l~~~~g-~~~~dvakRL~-d~Gihapt-~~fP--v~~~LmIepTE~eskeEIDrf~eAL~~I~~e~ 877 (954)
T PRK12566 816 PLKAQTG-ISEEDVAKRLM-DYGFHAPT-MSFP--VPGTLMVEPTESESKAELDRFVEAMLSIRAEI 877 (954)
T ss_pred ccccccC-CCHHHHHHHHH-HCCcEEeE-Eeec--cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHH
Confidence 2111111 12347899998 67987433 2342 47789999966 59999999999999888774
No 345
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.45 E-value=1.2e-10 Score=118.88 Aligned_cols=294 Identities=11% Similarity=0.073 Sum_probs=165.3
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC-------CC-CeEEEeCCCCcChHHHHhhhcCc---
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD-------PG-DAFLVPTPYYPGFDRDLRWRTGV--- 166 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~P~y~~~~~~~~~~~G~--- 166 (483)
+....+|+.+.+..+ -..+.+++++++++++..++..... ++ .+|+....+|++....+....+.
T Consensus 83 ~~~~~lae~L~~~~p----~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~ 158 (422)
T PRK05630 83 EPAIKLTRKLLNLTD----NGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGG 158 (422)
T ss_pred HHHHHHHHHHHhhCC----CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCccc
Confidence 344555655554321 1246899999999999988865421 23 57899998887743322211121
Q ss_pred ----------EEEEeecCCCCCcccCH-------HHHHHHHHHHHhcCCceeEEEEeC-CCCCCcCC-CCHHHHHHHHHH
Q 011570 167 ----------QLVPVVCDSSNDFKVTM-------EALEAAYEKAQESNIRIKGVLITN-PSNPLGTF-LDRETLKDIVSF 227 (483)
Q Consensus 167 ----------~~~~v~~~~~~~~~~d~-------~~l~~~i~~~~~~~~~~~~i~l~~-P~NPtG~~-~~~~~l~~i~~~ 227 (483)
.+..+|.... ...+. +.+++.+. .++.+|++.- +..-.|.+ .+.+.++++.++
T Consensus 159 ~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~------~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~l 230 (422)
T PRK05630 159 MHSLWKGTLPEQIFAPAPPV--RGSSPQEISEYLRSLELLID------ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTL 230 (422)
T ss_pred ccccccccCCCCeEcCCCcc--cCCChHHHHHHHHHHHHHHh------hceEEEEEechhcCcCCcccCCHHHHHHHHHH
Confidence 1122222210 01111 23333332 2676766664 25666774 467789999999
Q ss_pred HhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh--
Q 011570 228 INEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM-- 304 (483)
Q Consensus 228 a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~-- 304 (483)
|++||+++|.||++.++...+ .+...... . . .+| |+ +++|.++ .| ..+|.+++ ++.+.+.+...
T Consensus 231 c~~~g~llI~DEv~tG~GrtG--~~~a~~~~-g-v---~PD--i~--t~gK~l~-gG~~p~~av~~-~~~i~~~~~~~~~ 297 (422)
T PRK05630 231 CDKHDILLIADEIATGFGRTG--ELFATLAA-G-V---TPD--IM--CVGKALT-GGFMSFAATLC-TDKVAQLISTPNG 297 (422)
T ss_pred HHHcCCEEEEecceeCCCcCc--hhhHHHhc-C-C---CCC--ee--eeechhh-cCccccceeec-cHHHHHHHhccCC
Confidence 999999999999997642222 22221111 1 0 222 33 7899986 67 58999998 56666655321
Q ss_pred ------hhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC----CceeecCCceEEEeeecCchh
Q 011570 305 ------SSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV----GIGCLKSNAGLFLWMDLHHLL 374 (483)
Q Consensus 305 ------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----gi~~~~~~~g~f~~~~l~~~~ 374 (483)
...+..++.+.+++.+.|+-- ++ ....+++.+.-+++.+.|+++ .+.-.. .-|+++-+++....
T Consensus 298 ~~~~~h~~T~~g~Pla~aaa~aaL~~l---~~--~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vR-g~Gl~~~ie~~~~~ 371 (422)
T PRK05630 298 GGALMHGPTFMANPLACAVAHASLEII---ET--GMWRKQVKRIEAELIAGLSPLAHLPGVADVR-VLGAIGVVEMEQPV 371 (422)
T ss_pred CCccccCCCCcCCHHHHHHHHHHHHHH---Hh--CcHHHHHHHHHHHHHHHHHHhhcCCCeeeee-ccccEEEEEECCcc
Confidence 111224555555555444321 10 011222333333444434322 122122 23567778775321
Q ss_pred hccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 375 KEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 375 ~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
. ...+...++ ++||.+.+. + +.+||.... ++++++++++++|.++++.
T Consensus 372 ~------~~~~~~~~~-~~Gl~~~~~------g-~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 372 D------MEEATQAAV-DHGVWLRPF------G-RLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred c------HHHHHHHHH-HCCeEEEec------C-CEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 1 125556666 569998753 1 479999976 5999999999999999865
No 346
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.45 E-value=1.8e-10 Score=118.94 Aligned_cols=293 Identities=14% Similarity=0.059 Sum_probs=163.2
Q ss_pred cEEEe-CChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCc------------EEEEeecCCC--CCcc---
Q 011570 121 RIVMS-GGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGV------------QLVPVVCDSS--NDFK--- 180 (483)
Q Consensus 121 ~i~it-~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~------------~~~~v~~~~~--~~~~--- 180 (483)
.++++ +++++++..++.... ....+|+...-+|.+.........|. .+..+|.+.. ..+.
T Consensus 128 ~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 207 (464)
T PRK06938 128 KIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGG 207 (464)
T ss_pred eEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCch
Confidence 56665 789999998887642 22367888888887754332221111 1222332211 0111
Q ss_pred -----cCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcch
Q 011570 181 -----VTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVS 254 (483)
Q Consensus 181 -----~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s 254 (483)
.+++.+++.+.+......++.+|++.....-.|.+ .+.+.++++.++|++||+++|.||+..++...+ .+..
T Consensus 208 ~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG--~~~a 285 (464)
T PRK06938 208 EAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTG--KMFA 285 (464)
T ss_pred hhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc--HHHH
Confidence 13566777775321111246665554334444665 468899999999999999999999998742222 2222
Q ss_pred HHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH--hhhcCCCChHHHHHHHHhcCChhHHHHHH
Q 011570 255 IAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK--MSSFGLVSSQTQHLIATMLSDDQFVEKFI 332 (483)
Q Consensus 255 ~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~ 332 (483)
...+.- .+| |+ +++|.+| .|+.+|.+++. +++ +.+.. ....+..++++.+++.+.|+--. +
T Consensus 286 ~e~~gv-----~PD--iv--~~gKglg-gG~PlsAv~~~-~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~--~--- 348 (464)
T PRK06938 286 FEHAGI-----IPD--VV--VLSKAIG-GSLPLAVVVYR-EWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIK--E--- 348 (464)
T ss_pred HHhcCC-----CCC--EE--Eeecccc-CCCceEEEeeh-hHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHH--H---
Confidence 221211 222 22 6699998 89999999985 434 33221 11112356676666655553211 1
Q ss_pred HHHHHHHHHHHHHHHHhhhc----CCceeecCCceEEEeeecCchhhcc--------ChHHHHHHHHHHHHhcCeEeeCC
Q 011570 333 AESAKRIAERHKAFTWGLSQ----VGIGCLKSNAGLFLWMDLHHLLKEQ--------TYEAEMALWRVIINEVKLNVSPG 400 (483)
Q Consensus 333 ~~~~~~l~~~~~~l~~~L~~----~gi~~~~~~~g~f~~~~l~~~~~~~--------~~~~~~~~~~~Ll~~~gV~v~pg 400 (483)
+...++.++.-+++.+.|++ +++......-|+++.+++....... .......+...++ ++||++.++
T Consensus 349 ~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~ 427 (464)
T PRK06938 349 HRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECL-RRGLILELG 427 (464)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHH-HCCeEEeec
Confidence 01112222222333333332 3433333444677778774311100 0011234566666 469999875
Q ss_pred CCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 401 SSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 401 ~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
..+ .+.+|+.... +++++++++++++.+++.+.
T Consensus 428 g~~----~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 428 GRH----GSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred CCC----CCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 322 3579998765 59999999999999998763
No 347
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.45 E-value=8e-11 Score=127.75 Aligned_cols=308 Identities=15% Similarity=0.153 Sum_probs=185.4
Q ss_pred CCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--------CCCCeEEEeCCCCcChHHHHhhhcC
Q 011570 94 HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--------DPGDAFLVPTPYYPGFDRDLRWRTG 165 (483)
Q Consensus 94 ~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--------~~gd~Vlv~~P~y~~~~~~~~~~~G 165 (483)
+|..++...+..|+.+..| .+...+.. +|+.++-...+.++. ...++|+++.-.|+.....+... |
T Consensus 526 qG~lq~i~elq~~l~eltG----md~~Sl~p-~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~-G 599 (939)
T TIGR00461 526 EGYQELIAQLEKWLCSITG----FDAISLQP-NSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMA-G 599 (939)
T ss_pred HHHHHHHHHHHHHHHHHHC----CCCcccCC-chHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHC-C
Confidence 4677888888888888877 34333333 444444443332221 12357999999887766667765 9
Q ss_pred cEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc
Q 011570 166 VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV 245 (483)
Q Consensus 166 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~ 245 (483)
.+++.++.++ +..+|+++|++++.+ ++.++++|++++|+| +|.+-+ .+++|+++|+++|.++++|.++..-.
T Consensus 600 ~~Vv~V~~d~--~G~iDle~L~~~i~~---~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VDgAq~~al 671 (939)
T TIGR00461 600 MQVVPVNCDQ--DGNIDLVDLKNKAEQ---HGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLDGANMNAQ 671 (939)
T ss_pred CEEEEeccCC--CCCcCHHHHHHHHhh---cCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEEecChhhC
Confidence 9999999875 347999999999974 234789999999999 788754 38888999999999999999985311
Q ss_pred cCCCCCcchHHHhhhhccccCCCeEEEEecCccccC----CCCceEEEEEecChHHHHHHHH--h----------hhcCC
Q 011570 246 FTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG----FPGFRVGIIYSYNDQVVSCARK--M----------SSFGL 309 (483)
Q Consensus 246 ~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g----~~GlRiG~li~~~~~l~~~~~~--~----------~~~~~ 309 (483)
..- .+.. ..+-.+++.|.+|+|+ ..|--+|++.+. +.+...+.. . ...+.
T Consensus 672 ~~l----~~Pg---------~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr-~~L~~~lPg~~v~~t~d~~greq~Iga 737 (939)
T TIGR00461 672 VGL----TSPG---------DLGADVCHLNLHKTFCIPHGGGGPGMGPIGVK-SHLIPFLPKHDVVSMITGIGGSKSIGS 737 (939)
T ss_pred CCC----CCcc---------ccCCCEEEecCCccCCCCCCCCCCCeEEEEEh-hhchhhcCCCcccccccCCCCcccccc
Confidence 111 1111 2355677889999764 345558999884 323322110 0 00011
Q ss_pred CCh---------HHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC-ceE-E--EeeecCchhhc
Q 011570 310 VSS---------QTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN-AGL-F--LWMDLHHLLKE 376 (483)
Q Consensus 310 ~s~---------~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~-~g~-f--~~~~l~~~~~~ 376 (483)
+++ +...+-..++...+ +++..+.--.+.+++.+.|.+ ++++..+. .+. | +.++++.....
T Consensus 738 ~s~~~~g~a~~~l~a~~yi~~lG~~G-----L~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~ 811 (939)
T TIGR00461 738 VSAAPYGSASILPISWMYIKMMGNEG-----LPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAK 811 (939)
T ss_pred ccccccCcHHHHHHHHHHHHHHCHHH-----HHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhh
Confidence 111 11111112223222 344445555677888888876 55544332 222 1 23455532111
Q ss_pred cChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhh
Q 011570 377 QTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 377 ~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
.. ....+++++|++ +|+.--. ..|...+.=.++.+-. .+.++||+++++|.++-++..+
T Consensus 812 ~g-~~~~dIakrL~d-~G~hapt-~~~pv~g~lmiepTE~-eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 812 TG-IEAIDVAKRLQD-YGFHAPT-LSFPVPGTLMVEPTES-ESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred cC-CCHHHHHHHHHh-CCeeccc-cCCccCCeEEEEeecc-CCHHHHHHHHHHHHHHHHHHHH
Confidence 11 124588999986 5986322 2243323224666654 5899999999999887766554
No 348
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.45 E-value=2.1e-11 Score=124.49 Aligned_cols=251 Identities=14% Similarity=0.149 Sum_probs=175.4
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCC--------C------CeEEEeCCCCcChHHHH
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADP--------G------DAFLVPTPYYPGFDRDL 160 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~--------g------d~Vlv~~P~y~~~~~~~ 160 (483)
+..++.+.+..++.+.++. + ....-.+|.|+|+++.+.+.+..+. + -.|+++.-.|.++..++
T Consensus 98 ~a~~~E~~~v~~l~~l~~~--~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa 174 (460)
T COG0076 98 AAAELEERVVNMLSDLLGA--P-EEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAA 174 (460)
T ss_pred hHHHHHHHHHHHHHHHhCC--C-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHH
Confidence 6789999999999998772 1 3446789999999998777664211 1 16999999999999999
Q ss_pred hhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccc
Q 011570 161 RWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEI 240 (483)
Q Consensus 161 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Dea 240 (483)
..+ |+++..++++.. ++.+|+++++++|.+....+ +|+.+-++.+||.+=+ +++|.++|+++++++++|.|
T Consensus 175 ~~l-G~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~iDd---i~~ia~ia~~~~i~lHVDAA 245 (460)
T COG0076 175 RYL-GLGLRRVPTVPT-DYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSIDD---IEELADIAEEYGIWLHVDAA 245 (460)
T ss_pred HHh-CCCceeEEeccC-ccccCHHHHHHHHHhhccCc----eEEEEecCCCCCccCC---HHHHHHHHHHcCCcEEEEcc
Confidence 887 999999998765 78999999999998742211 3777778999999877 88889999999999999999
Q ss_pred cccCcc--CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecCh-HHHHHHHHhhhcCC--------
Q 011570 241 YAATVF--TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYND-QVVSCARKMSSFGL-------- 309 (483)
Q Consensus 241 y~~~~~--~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~-~l~~~~~~~~~~~~-------- 309 (483)
|+++.. .. ....-...+ ....-+.-+++|.. +.-..+||++..++ .+.+.......++.
T Consensus 246 ~GG~~~pf~~-~~~~~~f~l--------~~vdSIt~d~HK~g-~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~t 315 (460)
T COG0076 246 FGGFLLPFLE-PDGRWDFGL--------EGVDSITVDGHKYG-LAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFT 315 (460)
T ss_pred ccceeecccC-ccchhhcCC--------CCceEEEECccccc-CCCCCceEEEEECHHHhhhhhhcccccCCCCCcCcee
Confidence 998753 22 221101111 12223356999965 68888999999776 45554432222211
Q ss_pred --CCh-----HHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-ceeecCCceEEEeeecCc
Q 011570 310 --VSS-----QTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVG-IGCLKSNAGLFLWMDLHH 372 (483)
Q Consensus 310 --~s~-----~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~~~~~~g~f~~~~l~~ 372 (483)
.+. +.+.+....+..++ +++..++..+..+++.+.|++.| +++..+.....+.+++++
T Consensus 316 i~~sr~~~~~~~~~~~l~~lG~eG-----y~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~ 381 (460)
T COG0076 316 ILGSRPGRQALALYANLRRLGREG-----YRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKD 381 (460)
T ss_pred EeeccchHHHHHHHHHHHHhCHhH-----HHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCC
Confidence 111 22233333333333 35666667788899999999986 887764455677788854
No 349
>PRK07480 putative aminotransferase; Validated
Probab=99.44 E-value=1.2e-10 Score=120.05 Aligned_cols=311 Identities=11% Similarity=0.055 Sum_probs=170.9
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC-------CC-CeEEEeCCCCcChHHHHhhhcCcE-
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD-------PG-DAFLVPTPYYPGFDRDLRWRTGVQ- 167 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~P~y~~~~~~~~~~~G~~- 167 (483)
.+.+..+|+.+.+..+ -..+.+++++++++++..++..... +| .+|+...-+|.+.........|..
T Consensus 93 ~~~~~~lae~L~~~~p----~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~ 168 (456)
T PRK07480 93 HPPAIELAAKLAEVAP----PGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKY 168 (456)
T ss_pred CHHHHHHHHHHHHhCC----CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChh
Confidence 4555666666654422 2346899999999999998865421 33 468888888876432211111111
Q ss_pred -----------EEEeecCC--CCCcccC--------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHHH
Q 011570 168 -----------LVPVVCDS--SNDFKVT--------MEALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDIV 225 (483)
Q Consensus 168 -----------~~~v~~~~--~~~~~~d--------~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~ 225 (483)
+..++.+. ...+..+ ++.+++.+.+. ...++.+|++.....-.|.+ .+.+.+++|.
T Consensus 169 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr 246 (456)
T PRK07480 169 MHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL--GADNVAAFIGEPIQGAGGVIIPPATYWPEIQ 246 (456)
T ss_pred hhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHHHHHHH
Confidence 11111110 0000011 24454444321 12356666666445556774 5677899999
Q ss_pred HHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCc-eEEEEEecChHHHHHHHH-
Q 011570 226 SFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGF-RVGIIYSYNDQVVSCARK- 303 (483)
Q Consensus 226 ~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~li~~~~~l~~~~~~- 303 (483)
++|++||+++|.||++.++.-.+ .+.....+.- .+| + -+|+|.+| .|+ .+|.+++ .+++.+.+..
T Consensus 247 ~lc~~~g~llI~DEV~tGfGRtG--~~~a~~~~gv-----~PD--i--v~~gK~l~-gG~~Pi~av~~-~~~i~~~~~~~ 313 (456)
T PRK07480 247 RICRKYDILLVADEVICGFGRTG--EWFGSQHFGI-----KPD--L--MTIAKGLT-SGYIPMGAVGV-GDRVAEVLIEE 313 (456)
T ss_pred HHHHHcCCEEEEechhhCCCcCc--chhhhhhcCC-----CCC--e--eeeehhhc-cCCccceEEEE-cHHHHHHHhcC
Confidence 99999999999999997742222 2222222211 223 2 27799998 784 8999999 4566665521
Q ss_pred ---h--hhcCCCChHHHHHHHHhcCC---hhHHHHHH-HHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchh
Q 011570 304 ---M--SSFGLVSSQTQHLIATMLSD---DQFVEKFI-AESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLL 374 (483)
Q Consensus 304 ---~--~~~~~~s~~~q~~~~~~l~~---~~~~~~~~-~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~ 374 (483)
. ...+..++++.+++.+.|+- ++. .+.. ++.-+.+.+ .+.+ +.++++......-|+++-+++....
T Consensus 314 ~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l-~~~~~~~~g~~l~~---~l~~-l~~~~~i~~vrG~Glm~gie~~~~~ 388 (456)
T PRK07480 314 GGEFNHGFTYSGHPVAAAVALANLRILRDEGI-VERVRDDTGPYLQK---RLRE-LADHPLVGEVRGVGLVGAIELVKDK 388 (456)
T ss_pred CCCcccCCCCCcCHHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHH---HHHH-hhcCCCeeeEEeecceEEEEEeccc
Confidence 1 11133566776666655532 221 1112 122222222 2222 3334432222334567777773211
Q ss_pred hc-cCh----HHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 375 KE-QTY----EAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 375 ~~-~~~----~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
.. ..+ .....+...++ ++||.+.+. .+.+||+... ++++++++++++|.+++.+..+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~-------~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 389 ATRERFEAGGGVGTICRDHCF-ANGLIMRAV-------GDRMIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred cccccCcchhhHHHHHHHHHH-HCCcEEeec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 10 000 01124455555 569998652 1469999976 4999999999999999987644
No 350
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.42 E-value=1.8e-10 Score=117.72 Aligned_cols=291 Identities=14% Similarity=0.173 Sum_probs=166.7
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC------hHHHHhhhcCcEEE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPG------FDRDLRWRTGVQLV 169 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~------~~~~~~~~~G~~~~ 169 (483)
+..+++.+|++.+ .+..+++++++.++..++.+ +.+||+|++....|.. +...++.. |++++
T Consensus 124 ~~~le~~lA~l~g----------ae~alvv~sg~aAi~l~l~~-l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~-G~~~~ 191 (454)
T TIGR00474 124 YSHVEGLLCELTG----------AEDALVVNNNAAAVLLALNT-LAKGKEVIVSRGELVEIGGSFRIPDVMEQS-GAKLV 191 (454)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHH-hCCcCEEEECCChhhhhcchhhHHHHHHHc-CCEEE
Confidence 4678888888875 23355677777888888855 6899999999866422 22334554 99999
Q ss_pred EeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCC--c--CCCCHHHHHHHHHHHhhcCcEEEEccccccCc
Q 011570 170 PVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPL--G--TFLDRETLKDIVSFINEKNIHLVCDEIYAATV 245 (483)
Q Consensus 170 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPt--G--~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~ 245 (483)
.++.+. ..+++++++++.+ ++++|++.+++|++ | .+.+ +++|+++|+++|+++|+|...+.+.
T Consensus 192 ~v~~~~----~~~l~dle~aI~~------~T~lv~~~h~sN~~~~G~~~~~d---l~~I~~la~~~g~~vivD~~sG~l~ 258 (454)
T TIGR00474 192 EVGTTN----RTHLKDYEDAITE------NTALLLKVHTSNYRIVGFTEEVS---IAELVALGREHGLPVMEDLGSGSLV 258 (454)
T ss_pred EeCCCC----CCCHHHHHHhcCc------CCEEEEEEccCcccccCCCCCCC---HHHHHHHHHHcCCeEEEECCCcccc
Confidence 887642 2478999998864 79999999999995 6 4667 8889999999999999998643210
Q ss_pred ----cCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc--CCCChHHH----
Q 011570 246 ----FTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQ---- 315 (483)
Q Consensus 246 ----~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q---- 315 (483)
|+- ...+.+.... ..+..+++.|.+|.+|-| ..|++++. +.+.+.++..... ..+.-...
T Consensus 259 ~~~~~gl-~~~p~~~~~~------~~GaDiv~fSg~K~LgGp--~~G~i~g~-~~~i~~l~~~~l~r~lr~~k~~la~l~ 328 (454)
T TIGR00474 259 DLSRYGL-PDEPTVQEVI------AAGVDLVTFSGDKLLGGP--QAGIIVGK-KELIERLKKNPLTRALRVDKLTLAALE 328 (454)
T ss_pred cchhccC-CCCcccccHh------HcCCCEEEecCccccCCC--eEEEEEEC-HHHHHhhhhchhHHHHhhChHHHHHHH
Confidence 100 0001111111 124458888999998534 48999985 4444433221100 11222221
Q ss_pred HHHHHhcCChh-HHH----HHHHHHHHHHHHHHHHHHHhhhcC---Cc--eeecCC----ceEEEeeecCch---hhccC
Q 011570 316 HLIATMLSDDQ-FVE----KFIAESAKRIAERHKAFTWGLSQV---GI--GCLKSN----AGLFLWMDLHHL---LKEQT 378 (483)
Q Consensus 316 ~~~~~~l~~~~-~~~----~~~~~~~~~l~~~~~~l~~~L~~~---gi--~~~~~~----~g~f~~~~l~~~---~~~~~ 378 (483)
..+..++...+ +.. +.+....+.+.++...+.+.|+.. ++ ++.+.. ||-+--..+|.. +....
T Consensus 329 ~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~ 408 (454)
T TIGR00474 329 ATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPDG 408 (454)
T ss_pred HHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecCC
Confidence 22223333221 111 223334456666777777878653 22 333322 221111112211 00000
Q ss_pred hHHHHHHHHHHHHhcC--eEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHH
Q 011570 379 YEAEMALWRVIINEVK--LNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRI 430 (483)
Q Consensus 379 ~~~~~~~~~~Ll~~~g--V~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L 430 (483)
. ...++.++ |++.. |..+ -.++.+.+-+....+++++.++++|
T Consensus 409 ~-~~~~l~~~-lr~~~~~ii~r-------~~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 409 L-SAEKLEAR-LRELPPPIIGR-------IEDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred C-CHHHHHHH-HhcCCCCEEEE-------EECCEEEEEeCcCCHHHHHHHHHHh
Confidence 0 12244444 34444 4433 2356788888767888888888776
No 351
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.41 E-value=1.2e-10 Score=119.39 Aligned_cols=282 Identities=13% Similarity=0.096 Sum_probs=163.3
Q ss_pred CCcEEEeCChhHHHHHHHHHhcC-------CC-CeEEEeCCCCcChHHHHhhhcCcE-------------EEEeecCCCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLAD-------PG-DAFLVPTPYYPGFDRDLRWRTGVQ-------------LVPVVCDSSN 177 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~P~y~~~~~~~~~~~G~~-------------~~~v~~~~~~ 177 (483)
-+.+++++++++++..++..... +| .+|+...-+|.+....+....|.. +..++... .
T Consensus 105 ~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~-~ 183 (427)
T TIGR00508 105 LDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQ-N 183 (427)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCC-c
Confidence 36899999999999988865431 23 578999988877543322211211 01111110 0
Q ss_pred Ccc-----cCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcC-CCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCC
Q 011570 178 DFK-----VTMEALEAAYEKAQESNIRIKGVLITNP-SNPLGT-FLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKES 250 (483)
Q Consensus 178 ~~~-----~d~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~-~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~ 250 (483)
.+. -|++++++.+... +.++.+|++... ++-.|. +.+.+.+++|.++|++||+++|+||++.++...+ .
T Consensus 184 ~~~~~~~~~~~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G-~ 259 (427)
T TIGR00508 184 RFDEEWNEEAITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTG-K 259 (427)
T ss_pred cccchhHHHHHHHHHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC-c
Confidence 111 1456666666532 235655555532 555565 4578999999999999999999999997643332 2
Q ss_pred CcchHHHhhhhccccCCCeEEEEecCccccCCCCc-eEEEEEecChHHHHHHHHh-------hhcCCCChHHHHHHHHhc
Q 011570 251 SFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGF-RVGIIYSYNDQVVSCARKM-------SSFGLVSSQTQHLIATML 322 (483)
Q Consensus 251 ~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~li~~~~~l~~~~~~~-------~~~~~~s~~~q~~~~~~l 322 (483)
. .....+.- .++ |+ ++||.++ .|+ .++.++. ++.+.+.+... ...+..++++.+++.+.|
T Consensus 260 ~-~~~~~~~v-----~pD--i~--~~gK~l~-gG~~p~~a~~~-~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l 327 (427)
T TIGR00508 260 L-FACEHAGV-----VPD--IL--CVGKALT-GGYMTLSATVT-TDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASL 327 (427)
T ss_pred c-chhhhcCC-----CCC--EE--Eechhhh-cCcccceEEEE-cHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHH
Confidence 2 12211110 223 33 4799997 885 6787787 56666665431 111224666666655555
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc-eee--cCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeC
Q 011570 323 SDDQFVEKFIAESAKRIAERHKAFTWGLSQVGI-GCL--KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSP 399 (483)
Q Consensus 323 ~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi-~~~--~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~p 399 (483)
+- +++ ....++++++-+++.+.|++++. ... ...-|.++.+.+.... ....+...+++ +||.+.+
T Consensus 328 ~~---l~~--~~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~------~~~~~~~~l~~-~Gv~~~~ 395 (427)
T TIGR00508 328 AI---LLE--GEWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPV------NVEELQKKFVE-QGVWIRP 395 (427)
T ss_pred HH---HHh--CCHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCcc------CHHHHHHHHHH-CCeEEEe
Confidence 42 111 11233444555556666655421 111 1112456666664311 12356777765 5999875
Q ss_pred CCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 400 GSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 400 g~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
.. ..+|++... ++++++++++++|.+++.+
T Consensus 396 ~~-------~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 396 FG-------KLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred cC-------CEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 31 369998875 5999999999999998854
No 352
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.41 E-value=6e-10 Score=114.98 Aligned_cols=317 Identities=14% Similarity=0.078 Sum_probs=171.9
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCC--CcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcC-------
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDP--DRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTG------- 165 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~--~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G------- 165 (483)
.+.+..+|+.+.+..+ . ... ..+++++++++++..++.... .....|+...-+|.+.........|
T Consensus 100 ~~~~~~lAe~L~~~~p--~-~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~ 176 (459)
T PRK06931 100 TPLKDAFSEYLLSLLP--G-QGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNA 176 (459)
T ss_pred CHHHHHHHHHHHHhCC--C-ccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccC
Confidence 4566667777654421 0 011 134556899999998886542 2346788888888776544332111
Q ss_pred -----cEEEEeecCCCC--Ccc----cCHHHHHHHHHHHHh----cCCceeEEEEeCCCCCCcCC-CCHHHHHHHHHHHh
Q 011570 166 -----VQLVPVVCDSSN--DFK----VTMEALEAAYEKAQE----SNIRIKGVLITNPSNPLGTF-LDRETLKDIVSFIN 229 (483)
Q Consensus 166 -----~~~~~v~~~~~~--~~~----~d~~~l~~~i~~~~~----~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~~~a~ 229 (483)
..+..+|.+... .|. -+.+.++..+.+... ...++.+|++.....-.|.+ .+.+.++++.++|+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~ 256 (459)
T PRK06931 177 VNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQ 256 (459)
T ss_pred CCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH
Confidence 012223322110 011 123344333332221 12346666554334444654 57888999999999
Q ss_pred hcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh--hhc
Q 011570 230 EKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM--SSF 307 (483)
Q Consensus 230 ~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~--~~~ 307 (483)
+||+++|.||+..++...+ .+.....+.- .+| |+ +++|.+| .|+.+|.+++. +.+ +.+... ...
T Consensus 257 ~~g~LlI~DEV~tGfGRtG--~~~a~~~~gv-----~PD--iv--t~gK~l~-gG~Pi~av~~~-~~~-~~~~~~~~~~T 322 (459)
T PRK06931 257 KHGILLIVDEVQAGFARTG--KMFAFEHAGI-----EPD--II--VMSKAVG-GGLPLAVLGIK-KEF-DAWQPGGHTGT 322 (459)
T ss_pred HcCCEEEEecchhcCCcCc--hHHHhhhcCC-----CCC--EE--Eeccccc-CCcceeeeeeH-HHH-hhccCCCCCCC
Confidence 9999999999998743222 2222222211 223 22 6799998 89999988874 443 333211 111
Q ss_pred CCCChHHHHHHHHhcC---ChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhc-------c
Q 011570 308 GLVSSQTQHLIATMLS---DDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKE-------Q 377 (483)
Q Consensus 308 ~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~-------~ 377 (483)
+..++++.+++.+.|+ +.+. .++.++.-+++.+. |.+...++++......-|+++.+++...... .
T Consensus 323 ~~gnpla~aaala~L~~l~~~~l-~~~~~~~G~~l~~~---L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~ 398 (459)
T PRK06931 323 FRGNQLAMATGLTTLKILKEENL-AQNAAERGEWLKAQ---LAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYP 398 (459)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHH---HHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCC
Confidence 2356777666555553 2221 22233333333222 2222223344333344467777777431100 0
Q ss_pred -ChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 378 -TYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 378 -~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
.......+...++ ++||++.++.. ..+.+|+..+. ++++++++++++|.+++.+..+
T Consensus 399 ~~~~~~~~~~~~~~-~~Gvl~~~~~~----~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 399 ADGELAAAIQKACF-ENGLLLERGGR----NGNVVRLLPPLLITQAECEEFIDRFEQALLAAVK 457 (459)
T ss_pred ccHHHHHHHHHHHH-HCCcEEeecCC----CCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 0111234556666 46999976432 23579998876 5999999999999999987543
No 353
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.33 E-value=1.6e-09 Score=111.39 Aligned_cols=280 Identities=14% Similarity=0.092 Sum_probs=153.4
Q ss_pred CCcEEEeCChhHHHHHHHHHhc--------CC------CCeEEEeCCCCcChHHHHhhhcCcEEE-----------Eeec
Q 011570 119 PDRIVMSGGATGAHETVAFCLA--------DP------GDAFLVPTPYYPGFDRDLRWRTGVQLV-----------PVVC 173 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~--------~~------gd~Vlv~~P~y~~~~~~~~~~~G~~~~-----------~v~~ 173 (483)
.+.|++++++++++..++.... .. ..+|+...-+|.+....+....|.... .++.
T Consensus 110 ~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~ 189 (443)
T PRK08297 110 LPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDN 189 (443)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCC
Confidence 4689999999999999987652 11 257999999987765433322221100 0110
Q ss_pred CCCCCcc--------------cCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcC-CCCHHHHHHHHHHHhhcCcEEEEc
Q 011570 174 DSSNDFK--------------VTMEALEAAYEKAQESNIRIKGVLITNPSNPLGT-FLDRETLKDIVSFINEKNIHLVCD 238 (483)
Q Consensus 174 ~~~~~~~--------------~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~-~~~~~~l~~i~~~a~~~~~~iI~D 238 (483)
.. ..+. -+++.+++.+.+ ...++.+|++.....-.|. +.+.+.+++|.++|++||+++|.|
T Consensus 190 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~D 265 (443)
T PRK08297 190 PK-LRFPLPGEDLEEVEALEAEALAQARAAFER---HPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFD 265 (443)
T ss_pred CC-CCCCCcccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 00 0000 023444555543 2345666665533444465 468889999999999999999999
Q ss_pred cccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHH-Hh------hhcCCCC
Q 011570 239 EIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCAR-KM------SSFGLVS 311 (483)
Q Consensus 239 eay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~-~~------~~~~~~s 311 (483)
|++.++...+ .+.....+.- .+| ++ +|+|.+++ | |.+.. ++ +.+... .. ...+..+
T Consensus 266 EV~tGfGRtG--~~~a~~~~gv-----~PD--iv--~~gK~l~~-~---a~l~~-~~-i~~~~~~~~~~~~~~~~T~~gn 328 (443)
T PRK08297 266 EVQTGVGLTG--TAWAYQQLGV-----RPD--IV--AFGKKTQV-C---GIMAG-RR-VDEVEDNVFAVSSRINSTWGGN 328 (443)
T ss_pred chhhccCccc--hHHHHHhcCC-----CCC--EE--Eecccccc-c---ceecc-hH-HHHhhhhhccCccccCCCCCcc
Confidence 9998743332 2222222211 223 22 57998742 1 34433 32 222211 11 1112256
Q ss_pred hHHHHHHHHhcC---ChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-ce-eecCCceEEEeeecCchhhccChHHHHHHH
Q 011570 312 SQTQHLIATMLS---DDQFVEKFIAESAKRIAERHKAFTWGLSQVG-IG-CLKSNAGLFLWMDLHHLLKEQTYEAEMALW 386 (483)
Q Consensus 312 ~~~q~~~~~~l~---~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~-~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~ 386 (483)
+++..++.+.|+ +++. .+...+.-+.+++. +.+...+.+ +. ..... |+++.++++.. .....++
T Consensus 329 pl~~aaa~a~L~~l~~~~l-~~~~~~~g~~l~~~---L~~l~~~~~~~~~~vrg~-G~~~~i~~~~~------~~~~~~~ 397 (443)
T PRK08297 329 LVDMVRARRILEVIEEDGL-VENAARQGEYLLAR---LEELAAEFPAVVSNVRGR-GLMCAFDLPTT------ADRDEVI 397 (443)
T ss_pred HHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHH---HHHHHHHCCCcceeeecc-ceEEEEEecCH------HHHHHHH
Confidence 666666555554 2221 12222222222222 222222222 21 22333 56778888531 1123677
Q ss_pred HHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 387 RVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 387 ~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
..++ ++||++.|+. ...+|++.+. ++++++++++++|.+++++.
T Consensus 398 ~~l~-~~Gvl~~~~~------~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 398 RRLW-EEGVLVLPCG------ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred HHHH-HCCEEEecCC------CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 7777 5699998742 2468997655 59999999999999998753
No 354
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.32 E-value=6.5e-10 Score=111.52 Aligned_cols=264 Identities=16% Similarity=0.167 Sum_probs=162.5
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhCCCCCc---CCCcEEEeCChhHHHHHHHHHhcC--------CC-----C-eEEEeCCC
Q 011570 90 FQDYHGLPEFRNAVAKFMGKVRGNRITF---DPDRIVMSGGATGAHETVAFCLAD--------PG-----D-AFLVPTPY 152 (483)
Q Consensus 90 Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~---~~~~i~it~G~~~al~~~~~~l~~--------~g-----d-~Vlv~~P~ 152 (483)
|...+...++...+.+|+.+.+|..-.. ....=++|+|+++++...+.+..+ .| . .|++.+-+
T Consensus 71 ~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~a 150 (373)
T PF00282_consen 71 WEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQA 150 (373)
T ss_dssp TTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS
T ss_pred cccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccc
Confidence 3333457899999999999998832110 124678999999999877755421 12 2 56677778
Q ss_pred CcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcC
Q 011570 153 YPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKN 232 (483)
Q Consensus 153 y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~ 232 (483)
|..+..++..+ |..++.||+++ ++.+|+++|+++|.+..++|..+-+|+.+-.+..||.+=+ +.+|+++|++++
T Consensus 151 H~S~~Kaa~~l-Glg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~---l~~i~~i~~~~~ 224 (373)
T PF00282_consen 151 HYSIEKAARIL-GLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP---LEEIADICEKYN 224 (373)
T ss_dssp -THHHHHHHHT-TSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S---HHHHHHHHHHCT
T ss_pred ccHHHHhccee-eeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccccC---HHHHhhhccccc
Confidence 88888888886 99999999986 5689999999999887776654546667777889999855 888899999999
Q ss_pred cEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHH-HHHHHHhhhc----
Q 011570 233 IHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQV-VSCARKMSSF---- 307 (483)
Q Consensus 233 ~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l-~~~~~~~~~~---- 307 (483)
+|+.+|.+|++..+-. +.+.....-.+ .-+ -+..+++|.++ ....+|+++..++.. .........+
T Consensus 225 ~wlHVDaA~gg~~~~~-~~~~~~~~gi~-----~ad--Sit~d~HK~l~-~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~ 295 (373)
T PF00282_consen 225 IWLHVDAAYGGSALLS-PEYRHLLFGIE-----RAD--SITIDPHKWLG-VPYGCGVLLVRDKSDLRDAFSINADYLGND 295 (373)
T ss_dssp -EEEEEETTGGGGGGH-CTTGGGGTTGG-----GES--EEEEETTTTTS--SSS-EEEEESSGGGHHGGGEEEETCTT-S
T ss_pred eeeeeccccccccccc-ccccccccccc-----ccc--ccccchhhhhc-CCccceeEEeecccchHHHhccChhhhccc
Confidence 9999999998843322 22222111111 112 23458999987 667899999866543 3222100011
Q ss_pred --------------CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeee
Q 011570 308 --------------GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMD 369 (483)
Q Consensus 308 --------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~ 369 (483)
...+. ...++..++.-..+-.+-+++..++..+..+++.+.|++. ++++..+..-..+.++
T Consensus 296 ~~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr 371 (373)
T PF00282_consen 296 DRESDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFR 371 (373)
T ss_dssp -SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEE
T ss_pred ccccccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEE
Confidence 11222 2222222221111112334555666677788899999887 5777643333344444
No 355
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.31 E-value=4.7e-10 Score=114.24 Aligned_cols=169 Identities=20% Similarity=0.243 Sum_probs=127.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS 175 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~ 175 (483)
..+..+..|+.++ .....+++||++.++..++++++.+||.||++.+||-+....+-.. |+..+.+....
T Consensus 72 i~eAqe~aA~~fg---------Ad~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glila-Ga~Pvyl~p~~ 141 (557)
T COG1982 72 IKEAQELAARVFG---------ADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILA-GATPVYLEPSR 141 (557)
T ss_pred HHHHHHHHHHHhC---------CCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHc-CCceEEecCCC
Confidence 5677777777765 3447899999999999999999999999999999999888887665 99888776543
Q ss_pred CCC----cccCHHHHHHHHHHHHhcCCce-eEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCC
Q 011570 176 SND----FKVTMEALEAAYEKAQESNIRI-KGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKES 250 (483)
Q Consensus 176 ~~~----~~~d~~~l~~~i~~~~~~~~~~-~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~ 250 (483)
+.. ..++.+.+++++.++ +.. |+++++||.. -|.++. +++|++.+...++|+.+||++... ++. .
T Consensus 142 np~~gi~ggI~~~~~~~~l~~~----~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~-~~~-~ 211 (557)
T COG1982 142 NPLYGIIGGIPLETFKEALLAH----PDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAH-FDF-S 211 (557)
T ss_pred CccccccCCCCHHHHHHHHHhC----hhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCccc-ccc-c
Confidence 221 257899999988764 344 8899998877 699999 778888888999999999999653 333 2
Q ss_pred CcchHHHhhhhccccCCCeEEEEecCccccCCCCceEE-EEEec
Q 011570 251 SFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVG-IIYSY 293 (483)
Q Consensus 251 ~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG-~li~~ 293 (483)
+..+.... +...++++.|.+|.+ +++..+ ++...
T Consensus 212 ~~l~~~~~-------~~~~~~~tqS~HK~l--~alSQaS~iHv~ 246 (557)
T COG1982 212 PMLPESAL-------NGGADFVTQSTHKLL--AALSQASMIHVK 246 (557)
T ss_pred ccCcchhh-------hcCceEEEechhhhh--hhhhhhHHHhhC
Confidence 21121111 347788999999987 455555 55553
No 356
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.30 E-value=1e-09 Score=112.67 Aligned_cols=274 Identities=12% Similarity=0.132 Sum_probs=143.7
Q ss_pred CCcEEEeCChhHHHHHHHHHhc-CCC-CeEEEe-CCCCcChHHHHh----hhcCcE--EE--EeecCCCCCcccCHHHHH
Q 011570 119 PDRIVMSGGATGAHETVAFCLA-DPG-DAFLVP-TPYYPGFDRDLR----WRTGVQ--LV--PVVCDSSNDFKVTMEALE 187 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~-~~g-d~Vlv~-~P~y~~~~~~~~----~~~G~~--~~--~v~~~~~~~~~~d~~~l~ 187 (483)
.+.+++++++++++..++.... -.| ..|+.. ..+|..+..... ...|.. .. .+... + -|++.++
T Consensus 104 ~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~-~d~~~l~ 178 (431)
T PRK06209 104 ADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR----Y-NDIASLE 178 (431)
T ss_pred cceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC----C-CCHHHHH
Confidence 3689999999999999887532 123 345544 333332111100 000110 00 01111 1 2788999
Q ss_pred HHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCC
Q 011570 188 AAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNR 267 (483)
Q Consensus 188 ~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~ 267 (483)
+.+++. ..++.+|+ ..|- .|...+.+.+++|.++|++||+++|+||++.++.+.. ........ . .+
T Consensus 179 ~~l~~~---~~~~aavi-~Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~----~g~~~~~g-v---~P 244 (431)
T PRK06209 179 ALFEDH---PGRIACVI-LEPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHM----RGAQKLYG-I---VP 244 (431)
T ss_pred HHHHhC---CCCEEEEE-Eccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc----chhhHHhC-C---Cc
Confidence 888642 22455544 4553 2447788899999999999999999999987642211 11221111 0 12
Q ss_pred CeEEEEecCccccCCCCceEEEEEecChHHHHH--HHH---hhh-----cCCCChHHHHHHHHhc---CChhHHHHHHHH
Q 011570 268 NLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSC--ARK---MSS-----FGLVSSQTQHLIATML---SDDQFVEKFIAE 334 (483)
Q Consensus 268 ~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~--~~~---~~~-----~~~~s~~~q~~~~~~l---~~~~~~~~~~~~ 334 (483)
+ +.+++|.+| .|+.+|.+++ ++.+.+. +.. ... ....++++.+++.+.| .+.+.
T Consensus 245 D----i~t~gK~lg-gG~p~~av~~-~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~------- 311 (431)
T PRK06209 245 D----LSCFGKALG-NGFAVSALAG-KREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDV------- 311 (431)
T ss_pred c----eeeehhhhc-CCcccEEEEE-HHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCH-------
Confidence 2 357899998 7899999999 4556554 210 111 1223344444433333 22221
Q ss_pred HHHHHHHHHHHHHHhh----hcCCceeec-CCceEEEeeecCchhh-ccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCC
Q 011570 335 SAKRIAERHKAFTWGL----SQVGIGCLK-SNAGLFLWMDLHHLLK-EQTYEAEMALWRVIINEVKLNVSPGSSFHCPNP 408 (483)
Q Consensus 335 ~~~~l~~~~~~l~~~L----~~~gi~~~~-~~~g~f~~~~l~~~~~-~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~ 408 (483)
.+.+.++-+++.+.| .++++.... ..|.++...-+..... .....-...+...+++ .||.+.|
T Consensus 312 -~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~p~--------- 380 (431)
T PRK06209 312 -IERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIR-RGVLMPS--------- 380 (431)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHH-CCccccc---------
Confidence 222233333333333 334544322 1232222211111000 0111111255666665 5987521
Q ss_pred CEEEEEeccCCHHHHHHHHHHHHHHHHHhh
Q 011570 409 GWFRVCFANMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 409 ~~iRis~~~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
++|+.. .+++++++++++|.++++...
T Consensus 381 --l~is~~-ht~~dId~~l~~l~~~l~~~~ 407 (431)
T PRK06209 381 --LVVSYA-HGDADIERTIDAVHGALGVYR 407 (431)
T ss_pred --cccccc-CCHHHHHHHHHHHHHHHHHHH
Confidence 566643 699999999999999998863
No 357
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.29 E-value=2.3e-09 Score=101.52 Aligned_cols=326 Identities=17% Similarity=0.225 Sum_probs=208.1
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCC-----CeEEEeCCCCcChHH-HHh
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPG-----DAFLVPTPYYPGFDR-DLR 161 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~g-----d~Vlv~~P~y~~~~~-~~~ 161 (483)
..|....++..|.+++-+.++ -+.++.|+-+..|-++++..++++| .+..+++..|....+ ..+
T Consensus 73 EAYagsrs~~~L~~avkdifG----------fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~ 142 (471)
T COG3033 73 EAYAGSRSYYALADAVKDIFG----------FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQ 142 (471)
T ss_pred hhhcccccHHHHHHHHHHhcC----------ceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHH
Confidence 358888888999999998876 2567778888888888887776654 444555565544333 344
Q ss_pred hhcCcEEEEeecCCCCC--------cccCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcCCCCHHHHHHHHHHHhhcC
Q 011570 162 WRTGVQLVPVVCDSSND--------FKVTMEALEAAYEKAQESNIRIKGVLITNP-SNPLGTFLDRETLKDIVSFINEKN 232 (483)
Q Consensus 162 ~~~G~~~~~v~~~~~~~--------~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~~~~~~~l~~i~~~a~~~~ 232 (483)
. .|..++-++.++..+ ..+|++.|++.|.+...+ ++..|+++.- |.-.|+.+|.+.++++.++|++|+
T Consensus 143 ~-ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~--nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ 219 (471)
T COG3033 143 I-NGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGAD--NVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYD 219 (471)
T ss_pred h-cCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcc--cCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcC
Confidence 4 488888887765433 347899999999876433 4566666654 457899999999999999999999
Q ss_pred cEEEEcccccc-Cc-cC--CC--CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChH---HHHHHHH
Q 011570 233 IHLVCDEIYAA-TV-FT--KE--SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQ---VVSCARK 303 (483)
Q Consensus 233 ~~iI~Deay~~-~~-~~--~~--~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~---l~~~~~~ 303 (483)
+.++.|.+-.. .. |- .+ -..+|+..+..++- .+..- ..-|.-|. |+.-+ -|++...++- +....+.
T Consensus 220 ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~--sYaD~-~~mS~KKD-~lvnm-GGfl~~~D~~~fDvy~~~~~ 294 (471)
T COG3033 220 IPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMY--SYADG-CTMSAKKD-GLVNM-GGFLCFKDDSFFDVYEECRT 294 (471)
T ss_pred CcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHH--hhhhh-heeecccc-ceecc-ccEEEecCccHHHHHHHHHh
Confidence 99999987511 10 11 11 12256666655431 11111 12355565 23221 1577775542 3333332
Q ss_pred -------hhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchh--
Q 011570 304 -------MSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLL-- 374 (483)
Q Consensus 304 -------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~-- 374 (483)
+.++++.+.-...+++.-|.+.- -.+|++.+. +..++|.+.|.+.|+++..|.||--++++..+..
T Consensus 295 ~~V~~eG~~tYGgl~GrdmealAvGL~e~~-~~~yl~~Rv----~Qv~YL~~~l~~~GVpi~~paGGHavfvda~~~lph 369 (471)
T COG3033 295 LVVVQEGFPTYGGLAGRDMEALAVGLREGV-NFDYLAHRV----AQVQYLADGLEEAGVPIVQPAGGHAVFVDAGKFLPH 369 (471)
T ss_pred heEeeccccccCcccchhHHHHHHHHHHhc-CcHHHHHHH----HHHHHHHHHHHhcCCeeEecCCCceEEeehhhhcCC
Confidence 23345555555555555554321 133455443 3347899999999999999999888888765432
Q ss_pred -hccChHHHHHHHHHHHHhcCeEeeC-CCC-CCCCC---------CCEEEEEecc--CCHHHHHHHHHHHHHHHHHh
Q 011570 375 -KEQTYEAEMALWRVIINEVKLNVSP-GSS-FHCPN---------PGWFRVCFAN--MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 375 -~~~~~~~~~~~~~~Ll~~~gV~v~p-g~~-f~~~~---------~~~iRis~~~--~~~e~l~~~l~~L~~~l~~~ 437 (483)
....+.. ..|+..|..+.||...- |+. ++.+. -.-+|+++.. .+.+.++..++.++++.++.
T Consensus 370 ip~eqFpa-qala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~ 445 (471)
T COG3033 370 IPAEQFPA-QALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENA 445 (471)
T ss_pred CChhhCcH-HHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhcc
Confidence 2223333 37888899999997543 432 11111 1359999954 38899999999998877665
No 358
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.29 E-value=1.2e-09 Score=109.10 Aligned_cols=297 Identities=12% Similarity=0.087 Sum_probs=177.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-CCCCeEEEeCCCCcCh-H-HHHhhhcCc-EEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-DPGDAFLVPTPYYPGF-D-RDLRWRTGV-QLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~~~-~-~~~~~~~G~-~~~~v 171 (483)
..++-+.+.+.+.+.++ .+-+.+-++++.|++.++..++..++ ++||.|++.. .|+.- . +.++.. |. ++..+
T Consensus 37 F~~i~~e~~~~L~~l~~--~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~-g~~~v~~l 112 (374)
T TIGR01365 37 GKEKLAEAIKKTREMLG--VPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWVTDVTKQL-KLPDVRVL 112 (374)
T ss_pred HHHHHHHHHHHHHHHhC--CCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHHHHHHHhc-CCCCcEEE
Confidence 45555555556665555 11122236668999999999999998 5899998865 55543 3 555554 88 46666
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
..+. +-.+++++++. + +.|++++.-..||...+. .+++... ++.++|+|.+-+ +.. .+
T Consensus 113 ~~~~--g~~~~~~~ve~----------~-~~v~~vhnETSTGv~npv---~~i~~~~--~~~lliVDavSs---~g~-~~ 170 (374)
T TIGR01365 113 EAEY--GKLPDLKKVDF----------K-NDVVFTWNGTTSGVRVPN---GDFIPAD--REGLTICDATSA---AFA-QD 170 (374)
T ss_pred cCCC--CCCCCHHHcCC----------C-CCEEEecCCCchheeccc---ccccccc--CCCcEEEEccch---hcC-CC
Confidence 5443 33578888862 1 236778777899999994 4444322 478999999976 454 33
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHH--------Hh-------------hhcCCC
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCAR--------KM-------------SSFGLV 310 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~--------~~-------------~~~~~~ 310 (483)
+ .+.. -.+++.|..|.+++|+ -+|+++.+++.+..... .+ ......
T Consensus 171 l-~~d~-----------iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~ 237 (374)
T TIGR01365 171 L-DYHK-----------LDVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTI 237 (374)
T ss_pred C-ChhH-----------CcEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCC
Confidence 2 2221 3366789999998654 25677775554433211 00 001112
Q ss_pred ChHHHHHHHHhcCChhHHHH--HHHHHHHHHHHHHHHHHHhhhcCC-ceeecC----CceEEEeeecCch-hh----ccC
Q 011570 311 SSQTQHLIATMLSDDQFVEK--FIAESAKRIAERHKAFTWGLSQVG-IGCLKS----NAGLFLWMDLHHL-LK----EQT 378 (483)
Q Consensus 311 s~~~q~~~~~~l~~~~~~~~--~~~~~~~~l~~~~~~l~~~L~~~g-i~~~~~----~~g~f~~~~l~~~-~~----~~~ 378 (483)
+++...++.+++..-.++.+ -++.+.++.+++.+.+++.++++| +..... .+...+.+.++.. .+ ...
T Consensus 238 ~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~ 317 (374)
T TIGR01365 238 NTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQ 317 (374)
T ss_pred CChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchh
Confidence 23333333222221122222 256777788889999999999998 665542 2333344555432 11 000
Q ss_pred hHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 379 YEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 379 ~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
..-..++...+. ++||.+.+|..- ..+..|||+... ++.++++.+++.|.=+.
T Consensus 318 ~~~~~~~~~~l~-~~gi~i~~G~~~--~~~~~fRIg~~G~i~~~di~~l~~~l~~~~ 371 (374)
T TIGR01365 318 ADFAKELISTLE-KEGVAYDIGSYR--DAPSGLRIWCGATVEKSDLECLCPWLDWAF 371 (374)
T ss_pred hHHHHHHHHHHH-HCCEEEeccccc--cCCCceEEecCCcCCHHHHHHHHHHHHHHH
Confidence 000124555554 569999988643 234679999854 79999999999986443
No 359
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.28 E-value=1.8e-09 Score=110.86 Aligned_cols=280 Identities=13% Similarity=0.123 Sum_probs=152.6
Q ss_pred CCcEEEeCChhHHHHHHHHHhcC--------------------------CC---CeEEEeCCCCcChHHHHhhhcCcE--
Q 011570 119 PDRIVMSGGATGAHETVAFCLAD--------------------------PG---DAFLVPTPYYPGFDRDLRWRTGVQ-- 167 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~--------------------------~g---d~Vlv~~P~y~~~~~~~~~~~G~~-- 167 (483)
-+.+++++++++|+..++..... +| ..|+....+|.+.........|..
T Consensus 122 ~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~ 201 (464)
T TIGR00699 122 QDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPI 201 (464)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccc
Confidence 36899999999999999876520 11 269999999876544332221211
Q ss_pred ---------EEEeecCCC-CCc-----------ccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHH
Q 011570 168 ---------LVPVVCDSS-NDF-----------KVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIV 225 (483)
Q Consensus 168 ---------~~~v~~~~~-~~~-----------~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~ 225 (483)
+..+|.+.. ..+ .-+++.+++.+.+ .+.++.+|++.......|.+. +.+.++++.
T Consensus 202 ~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~---~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr 278 (464)
T TIGR00699 202 HKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKK---WHKPVAAIIVEPIQSEGGDNHASPDFFRKLR 278 (464)
T ss_pred cccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHh---cCCcEEEEEEeCCCCCCCCcCCCHHHHHHHH
Confidence 111221110 000 0135556666643 223576766654466668766 788899999
Q ss_pred HHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHH--HHHH
Q 011570 226 SFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVS--CARK 303 (483)
Q Consensus 226 ~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~--~~~~ 303 (483)
++|++||+++|.||+..++...+ .+.....+.- .....+ -+++|.+|-.| ++++ .+.+.. ....
T Consensus 279 ~lc~~~g~lLI~DEV~tGfGrtG--~~fa~e~~gv-----~~~PDi--~t~gK~lg~gG----~~~~-~~~~~~~~~~~~ 344 (464)
T TIGR00699 279 DITKKHNVAFIVDEVQTGVGATG--KFWAHEHWNL-----DDPPDM--VTFSKKFQTAG----YFFH-DPAFRPNKPYRQ 344 (464)
T ss_pred HHHHHcCCEEEEeeeeeCCCCCc--chhHHHhcCC-----CCCCCE--EEehhhhccCC----cccc-chhccCCCCccc
Confidence 99999999999999997743222 2112221110 101222 37799985234 4444 222110 0001
Q ss_pred hhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc----CC--ceeec-CCceEEEeeecCchhhc
Q 011570 304 MSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ----VG--IGCLK-SNAGLFLWMDLHHLLKE 376 (483)
Q Consensus 304 ~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~g--i~~~~-~~~g~f~~~~l~~~~~~ 376 (483)
...+ ..++.+.+++.+.|..-. + ....+..++.-+++.+.|++ ++ +.... ..-|+++-++++..
T Consensus 345 ~~T~-~gnp~~~aaa~a~L~~l~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~--- 415 (464)
T TIGR00699 345 FNTW-MGDPSRALILREIIQEIK--R---KDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDE--- 415 (464)
T ss_pred ccCC-CCCHHHHHHHHHHHHHHH--h---cCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCH---
Confidence 1122 245555555544442110 0 11112222222333333333 22 11111 13467887887531
Q ss_pred cChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 377 QTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 377 ~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
.....+.+.+++ +||++.+. +.+.+||.... ++++++++++++|.+++
T Consensus 416 ---~~~~~i~~~~~~-~Gvl~~~~------g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 416 ---AKRDKLLKKARN-NGVNIGGC------GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred ---HHHHHHHHHHHH-CCcEEecC------CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 112356777775 59998753 23679999976 59999999999998763
No 360
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.27 E-value=1.6e-09 Score=119.22 Aligned_cols=274 Identities=14% Similarity=0.152 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh-cCCC--CeEEEeCCCCcChHHHHhhh---cCcEEEEe
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL-ADPG--DAFLVPTPYYPGFDRDLRWR---TGVQLVPV 171 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l-~~~g--d~Vlv~~P~y~~~~~~~~~~---~G~~~~~v 171 (483)
+++..||++.+ .+++|+.++.++|.+...++.++ +.+| |+|++++-.|+.+...++.. .|++++.+
T Consensus 152 ~~Qt~ia~LtG--------~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v 223 (993)
T PLN02414 152 NYQTMITDLTG--------LPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVA 223 (993)
T ss_pred HHHHHHHHHhC--------CChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEe
Confidence 44555555544 68999999999999999888776 3444 78999999999887665432 48999988
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+.+.. + .. +..+-.+++.+|++ +|.+.+ +++|++.|+++|+++++ .+... .- ..
T Consensus 224 ~~~~~-----~------~~------~~~v~~vlvq~P~~-~G~v~d---v~~I~~~ah~~GaL~iV-aad~l---al-~~ 277 (993)
T PLN02414 224 DEKDF-----D------YS------SGDVCGVLVQYPAT-DGEVLD---YAEFVKNAHANGVKVVM-ATDLL---AL-TM 277 (993)
T ss_pred cchhh-----c------cc------cCceEEEEEecCCC-CeEEcC---HHHHHHHHHHcCCEEEE-EECHH---Hh-cC
Confidence 86431 1 00 01344555556654 999987 88999999999999999 44321 11 11
Q ss_pred cchHHHhhhhccccCCCeEEEEecCcccc---CCCCceEEEEEecChHHHHHHH-Hhhh---------------------
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDM---GFPGFRVGIIYSYNDQVVSCAR-KMSS--------------------- 306 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~---g~~GlRiG~li~~~~~l~~~~~-~~~~--------------------- 306 (483)
..+... .+..|++++..|.. |..|-+.|++.+.++ +.+.+. .+..
T Consensus 278 l~~pge---------~GADi~vgsgqKwg~P~G~GGP~aGflavr~~-~~r~~PgriVG~s~d~~g~~~~~l~LqtReqh 347 (993)
T PLN02414 278 LKPPGE---------WGADIVVGSAQRFGVPMGYGGPHAAFLATSQE-YKRLMPGRIIGVSVDSSGKPALRMAMQTREQH 347 (993)
T ss_pred CCCHhh---------ccCcEEEECCCccccCCCCCCCCeeEEEECHH-HHhhCCCcccCcccCCCCCcccccccccccch
Confidence 112222 25567788888874 335566999999543 333221 0000
Q ss_pred ----cCCCChHHHHHHHHhcCCh--hH-HHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC-ceEEEeeecCchhhccC
Q 011570 307 ----FGLVSSQTQHLIATMLSDD--QF-VEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN-AGLFLWMDLHHLLKEQT 378 (483)
Q Consensus 307 ----~~~~s~~~q~~~~~~l~~~--~~-~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~-~g~f~~~~l~~~~~~~~ 378 (483)
.++.+.-+..++.+.+... .+ -..-+++..+++.++..++.+.|...|+++..+. .+ -+.++++.
T Consensus 348 iRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~~~f~-~vt~~~~~------ 420 (993)
T PLN02414 348 IRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSLPFFD-TVKVKCSD------ 420 (993)
T ss_pred hhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCcC-eEEEecCC------
Confidence 0111111111222222110 00 0111455566777788888899988887765432 22 22334431
Q ss_pred hHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHH
Q 011570 379 YEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITS 432 (483)
Q Consensus 379 ~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~ 432 (483)
..++.++|. ++||.++... ++.+|+|+.. .++++++.+++.|+.
T Consensus 421 ---~~~v~~~L~-~~gI~l~~~~------~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 421 ---ADAIADAAA-KVGINLRVVD------ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred ---HHHHHHHHH-HCCCeeEEec------CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 135667776 5599776321 3569999977 599999999999963
No 361
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.23 E-value=2.2e-08 Score=102.86 Aligned_cols=277 Identities=12% Similarity=0.052 Sum_probs=149.6
Q ss_pred CCcEEEeCChhHHHHHHHHHhc----------C-C---CCeEEEeCCCCcChHHHHhhhcCcE-EE--Eeec--------
Q 011570 119 PDRIVMSGGATGAHETVAFCLA----------D-P---GDAFLVPTPYYPGFDRDLRWRTGVQ-LV--PVVC-------- 173 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~----------~-~---gd~Vlv~~P~y~~~~~~~~~~~G~~-~~--~v~~-------- 173 (483)
.+.+++++++++|+..++.... + + +.+|+...-+|.+.........|.. .. ..|.
T Consensus 103 ~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~ 182 (431)
T TIGR03251 103 LPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDN 182 (431)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCC
Confidence 4689999999999999887652 1 1 3679999988877554332222311 00 0010
Q ss_pred CCC-CCc-----c-------cCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHHHHHHhhcCcEEEEcc
Q 011570 174 DSS-NDF-----K-------VTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDIVSFINEKNIHLVCDE 239 (483)
Q Consensus 174 ~~~-~~~-----~-------~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~~~a~~~~~~iI~De 239 (483)
... .++ . -+++.+++.+.. .+.++.+|++.-...-.|.+ .+.+.+++|.++|++||+++|+||
T Consensus 183 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 259 (431)
T TIGR03251 183 PKLTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDE 259 (431)
T ss_pred CcccCCccccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 000 000 0 123344444432 23467777766545556765 578889999999999999999999
Q ss_pred ccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHH-H------hhhcCCCCh
Q 011570 240 IYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCAR-K------MSSFGLVSS 312 (483)
Q Consensus 240 ay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~-~------~~~~~~~s~ 312 (483)
++.++...+ .+.....+.- .+| ++ +++|.+ +. .|++.. .+ +.+... . .......++
T Consensus 260 V~tG~GrtG--~~~a~~~~gv-----~PD--i~--~~gK~~--~~--~g~~~~-~~-i~~~~~~~~~~~~~~~~T~~gnp 322 (431)
T TIGR03251 260 VQTGVGLTG--TAWAYQQLGV-----QPD--IV--AFGKKT--QV--CGIMAG-RR-VDEVADNVFAVPSRLNSTWGGNL 322 (431)
T ss_pred chhccCccc--hHHHHHhcCC-----CCC--EE--EecccC--cc--ceEEec-ch-HHHhhhhcccCccccCCCCCCCH
Confidence 998743332 1112111110 222 22 578986 22 356654 32 211111 0 111122456
Q ss_pred HHHHHHHHhcCC---hhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-ceeecCCceEEEeeecCchhhccChHHHHHHHHH
Q 011570 313 QTQHLIATMLSD---DQFVEKFIAESAKRIAERHKAFTWGLSQVG-IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRV 388 (483)
Q Consensus 313 ~~q~~~~~~l~~---~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~ 388 (483)
++..++.+.|+- .+. .+..+++-+++ ++.+.+...+.+ +......-|+++.++++.. .....+...
T Consensus 323 l~~aaa~a~L~~l~~~~l-~~~~~~~g~~l---~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~------~~~~~~~~~ 392 (431)
T TIGR03251 323 VDMVRATRILEIIEEERL-VDNARVQGAHL---LARLHELAAEFPHLVSNPRGRGLMCAFDLPST------ADRDEVIRQ 392 (431)
T ss_pred HHHHHHHHHHHHHHhcCH-HHHHHHHHHHH---HHHHHHHHHhCccceecccccceeEEEEeCCH------HHHHHHHHH
Confidence 665555555432 221 11222222222 222322222232 3222223356777887632 112356777
Q ss_pred HHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHH
Q 011570 389 IINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITS 432 (483)
Q Consensus 389 Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~ 432 (483)
++ ++||.+.|.. .+.+|++... .+++++++++++|.+
T Consensus 393 l~-~~Gvl~~~~g------~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 393 LY-REGVLLLGCG------ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred HH-hCCeEEecCC------CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 77 5699997642 2468988876 599999999999875
No 362
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.23 E-value=6.3e-09 Score=115.01 Aligned_cols=261 Identities=13% Similarity=0.122 Sum_probs=162.7
Q ss_pred cCCCcEEEeCChhHHHHHHHHHh-cCC--CCeEEEeCCCCcChHHHHhh---hcCcEEEEeecCCCCCcccCHHHHHHHH
Q 011570 117 FDPDRIVMSGGATGAHETVAFCL-ADP--GDAFLVPTPYYPGFDRDLRW---RTGVQLVPVVCDSSNDFKVTMEALEAAY 190 (483)
Q Consensus 117 ~~~~~i~it~G~~~al~~~~~~l-~~~--gd~Vlv~~P~y~~~~~~~~~---~~G~~~~~v~~~~~~~~~~d~~~l~~~i 190 (483)
.+++|+.+..+++.+...++.++ ..+ +|+|++++-.|+.....++. ..|++++.++.+++ ++
T Consensus 136 ~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d----~~-------- 203 (954)
T PRK05367 136 LEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA----LD-------- 203 (954)
T ss_pred CChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC----CC--------
Confidence 68899999999999999888776 344 48999999999987765432 24999999986531 11
Q ss_pred HHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeE
Q 011570 191 EKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLI 270 (483)
Q Consensus 191 ~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~v 270 (483)
. .++.++++.+|+ -+|.+.+ +++|++.|+++|+++++|-....+... .+.. ..+..
T Consensus 204 ~------~~~~~vlvq~p~-~~G~i~d---~~~i~~~ah~~Gal~~vda~~~Al~~l-----~~pg---------e~GaD 259 (954)
T PRK05367 204 H------DDVFGVLLQYPG-TSGEVRD---YTALIAAAHARGALVAVAADLLALTLL-----TPPG---------EMGAD 259 (954)
T ss_pred c------ccEEEEEEecCC-CCeeecc---HHHHHHHHHHcCCEEEEEehhhhccCC-----CChh---------hcCCC
Confidence 0 155667777774 5999987 889999999999999998754222111 1111 23556
Q ss_pred EEEecCccc-----cCCCCceEEEEEecChHHHHHHH-Hhh-----------------------hc--CCCCh-HHHHH-
Q 011570 271 HIVYSLSKD-----MGFPGFRVGIIYSYNDQVVSCAR-KMS-----------------------SF--GLVSS-QTQHL- 317 (483)
Q Consensus 271 i~~~S~SK~-----~g~~GlRiG~li~~~~~l~~~~~-~~~-----------------------~~--~~~s~-~~q~~- 317 (483)
|+++|..|. ||-|| .|++.+. +.+.+.+. .+. .+ ++.|. ..|..
T Consensus 260 i~vgs~qkfg~P~g~GGP~--aGflavr-~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~ 336 (954)
T PRK05367 260 IAVGSAQRFGVPMGFGGPH--AAYFAVR-DAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLL 336 (954)
T ss_pred EEEeeCcccCCCCCCCCCC--EEEEEEC-HHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHH
Confidence 788888887 54454 8999985 43433321 000 00 11111 11111
Q ss_pred -HHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeE
Q 011570 318 -IATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLN 396 (483)
Q Consensus 318 -~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~ 396 (483)
+.+.+--.-+-..-+++..++...+..++.+.|.+.|+++..+.-.--+.++++. ...++.++|++ +||.
T Consensus 337 a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~f~~~~~~~~~--------~~~~i~~~l~~-~gi~ 407 (954)
T PRK05367 337 AVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDSFFDTLTVEVGG--------DAAAVLARALA-AGIN 407 (954)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCCeEEEeCCC--------CHHHHHHHHHH-CCce
Confidence 1111000000012245566677778888899998778776533211122233321 13367777775 5998
Q ss_pred eeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHH
Q 011570 397 VSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRIT 431 (483)
Q Consensus 397 v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~ 431 (483)
++. . .++.+|+|+.. .++++++.+++.|.
T Consensus 408 ~~~---~---~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 408 LRR---V---DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred ecc---c---cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 732 1 14579999976 59999999999997
No 363
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.21 E-value=6.9e-09 Score=103.70 Aligned_cols=290 Identities=14% Similarity=0.118 Sum_probs=161.0
Q ss_pred CCcEEEeCChhHHHHHHHHHhc-------CCC-CeEEEeCCCCcChHHHHhhhcC-------------cEEEEeecCCC-
Q 011570 119 PDRIVMSGGATGAHETVAFCLA-------DPG-DAFLVPTPYYPGFDRDLRWRTG-------------VQLVPVVCDSS- 176 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~-------~~g-d~Vlv~~P~y~~~~~~~~~~~G-------------~~~~~v~~~~~- 176 (483)
-+.|++|+|+++++..++.... +|. .+++.-..+|.+-.-..-...| ..+..+|.+..
T Consensus 105 l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y 184 (449)
T COG0161 105 LDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAY 184 (449)
T ss_pred ccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCccc
Confidence 5789999999999999886542 232 3488888888653221111111 01112222110
Q ss_pred -----CCcc----cCHHHHHHHHHHHHhcCCceeEEEEeCC--CCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccccccC
Q 011570 177 -----NDFK----VTMEALEAAYEKAQESNIRIKGVLITNP--SNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYAAT 244 (483)
Q Consensus 177 -----~~~~----~d~~~l~~~i~~~~~~~~~~~~i~l~~P--~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~~ 244 (483)
+.+. -..++|++.|.. +++..-+-++.-| ..-+|.++ ++..++++.++|++||+++|.||+-.++
T Consensus 185 ~~~~~~~~~~~~~~~a~~le~~i~~---~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGF 261 (449)
T COG0161 185 RRGFFGEGDEEFAEAADELEALILE---HGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGF 261 (449)
T ss_pred ccCCCCCChHHHHHHHHHHHHHHHh---cCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCC
Confidence 1111 225566666655 3423334455566 34477765 5557999999999999999999998874
Q ss_pred ccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH--hhhc-----CCCChHHHHH
Q 011570 245 VFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK--MSSF-----GLVSSQTQHL 317 (483)
Q Consensus 245 ~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~--~~~~-----~~~s~~~q~~ 317 (483)
-.++ +.| ......- .+| |+ +++|.++-.=+.+|.+++ .+.+.+.+.. ...+ ++.++++.++
T Consensus 262 GRTG-~~F-A~e~~gi-----~PD--i~--~~aKGLT~GY~Pl~a~l~-~~~I~~~~~~~~~~~f~HG~TYsghPlacAa 329 (449)
T COG0161 262 GRTG-KMF-ACEHAGI-----VPD--IL--CLAKGLTGGYLPLSAVLT-SDRIYEAFSDGDAGAFMHGHTYSGNPLACAA 329 (449)
T ss_pred CcCc-hhh-hhhhcCC-----CCC--ee--eecccccccchhhHhHhh-hHHHHHHHhcccCCeeccCCccccCHHHHHH
Confidence 3333 222 1111110 222 22 678988634467777777 4555555433 2222 3345655554
Q ss_pred HHHhc---CChhHHHHHHHHHHHHHHHHHHHHHHhhhc----CCceeecCCceEEEeeecCchhhccC---hHHHHHHHH
Q 011570 318 IATML---SDDQFVEKFIAESAKRIAERHKAFTWGLSQ----VGIGCLKSNAGLFLWMDLHHLLKEQT---YEAEMALWR 387 (483)
Q Consensus 318 ~~~~l---~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~gi~~~~~~~g~f~~~~l~~~~~~~~---~~~~~~~~~ 387 (483)
+.+.| .++++ + ++.++.-.++.+.|.+ +..--....-|++.-+++......+. ......+..
T Consensus 330 Ala~L~i~e~e~l----~----~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~ 401 (449)
T COG0161 330 ALANLDILEEEDL----L----ERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRA 401 (449)
T ss_pred HHHHHHHHHhcCH----H----HHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHH
Confidence 44333 22332 2 2223333444444443 21222234456777778765433221 111223444
Q ss_pred HHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 388 VIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 388 ~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
..+ ++|+.++|.. ..+=++... +++++++++++++.++++....
T Consensus 402 ~~~-e~Gl~iRp~g-------~~i~~~PPliit~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 402 AAL-ERGLLIRPLG-------DVIYLMPPLIITREEIDELVDALREALDETLA 446 (449)
T ss_pred HHH-HCCeEEeecC-------CEEEEcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 444 5699999862 245566655 4999999999999999987643
No 364
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.20 E-value=7.2e-08 Score=101.51 Aligned_cols=148 Identities=18% Similarity=0.258 Sum_probs=113.5
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC----C-----------------------
Q 011570 90 FQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD----P----------------------- 142 (483)
Q Consensus 90 Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~----~----------------------- 142 (483)
|...++...+.+.+.+|+.+..|. +...=.+|+|+|+++...+.+..+ |
T Consensus 115 ~e~SP~~t~lE~~vi~~la~l~G~----~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~ 190 (608)
T TIGR03811 115 YESSPATSQMEEEVGKEFATLMGY----KNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMP 190 (608)
T ss_pred cccCchHHHHHHHHHHHHHHHhCC----CCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccc
Confidence 334456789999999999999883 334456889999888766544311 0
Q ss_pred -------------------------C------CeEEEeCCCCcChHHHHhhhcCc---EEEEeecCCCCCcccCHHHHHH
Q 011570 143 -------------------------G------DAFLVPTPYYPGFDRDLRWRTGV---QLVPVVCDSSNDFKVTMEALEA 188 (483)
Q Consensus 143 -------------------------g------d~Vlv~~P~y~~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~ 188 (483)
| -+|+++.-.|.++..++..+ |. .++.||+++ ++.+|++.|++
T Consensus 191 ~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~il-GlG~~~vv~VpvD~--~~rmd~~~L~~ 267 (608)
T TIGR03811 191 TKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADII-GIGLDQVIPVPVDS--NYRMDINELEK 267 (608)
T ss_pred cccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHc-CCCcccEEEeecCC--CCcCCHHHHHH
Confidence 0 05788888888888888876 87 589999875 57999999999
Q ss_pred HHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCc--EEEEccccccC
Q 011570 189 AYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNI--HLVCDEIYAAT 244 (483)
Q Consensus 189 ~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~--~iI~Deay~~~ 244 (483)
.|++..+++..+-+|+.+-....+|.+=+.+++.+|++.++++|+ |+.+|.||+++
T Consensus 268 ~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~ 325 (608)
T TIGR03811 268 IIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGY 325 (608)
T ss_pred HHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccch
Confidence 999877777666667777788899999996666666665578887 69999999984
No 365
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.19 E-value=3.2e-08 Score=107.72 Aligned_cols=230 Identities=13% Similarity=0.080 Sum_probs=129.9
Q ss_pred HHHHHHHHHHH--hcCCceeEEEEeCC-CCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhh
Q 011570 184 EALEAAYEKAQ--ESNIRIKGVLITNP-SNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEII 259 (483)
Q Consensus 184 ~~l~~~i~~~~--~~~~~~~~i~l~~P-~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~ 259 (483)
+.+++.|.+.. ..+.++.+|++.-. +.-.|.++ +.+.++++.++|++||+++|.||++.++...+ . +.....+.
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG-~-~fa~e~~g 644 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLG-V-ESAWELLG 644 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCccc-c-hhhHHhcC
Confidence 44555554311 11235666665542 56668765 67889999999999999999999998853333 2 22222221
Q ss_pred hhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHH--------hhhcCCCChHHHHHHHHhcC---ChhH
Q 011570 260 DQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARK--------MSSFGLVSSQTQHLIATMLS---DDQF 327 (483)
Q Consensus 260 ~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~--------~~~~~~~s~~~q~~~~~~l~---~~~~ 327 (483)
- .+| |+ +++|.++ .| +.+|.+++ .+++.+.+.. ....+..++++.+++.+.|+ +.+.
T Consensus 645 v-----~PD--Ii--~~gKgLt-gG~~Plaa~l~-~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~ 713 (817)
T PLN02974 645 C-----KPD--IA--CYAKLLT-GGLVPLAATLA-TEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPST 713 (817)
T ss_pred C-----CCC--EE--eeccccc-CCCCccEEEEE-cHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccH
Confidence 1 222 32 6789998 89 69999999 5666666531 01112356666666544443 3322
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHhhhcCCceeecCCceEEEeeecCchhhccC--hHHHHHHHHHHHHhcCeEeeCCCCCC
Q 011570 328 VEKFIAESAKRIAER-HKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQT--YEAEMALWRVIINEVKLNVSPGSSFH 404 (483)
Q Consensus 328 ~~~~~~~~~~~l~~~-~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~--~~~~~~~~~~Ll~~~gV~v~pg~~f~ 404 (483)
..+ +.+....+.+. .+.+.+.|.++..-.....-|+++-+++........ ......+.+.++.++||.++|..
T Consensus 714 ~~~-l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~G--- 789 (817)
T PLN02974 714 NPN-LIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLG--- 789 (817)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecC---
Confidence 111 22222222211 123333444443211222335677787753211111 11123556666636799998731
Q ss_pred CCCCCEEEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 405 CPNPGWFRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 405 ~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
+.+|+.... ++++++++++++|.+.+
T Consensus 790 ----nvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 790 ----NVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred ----CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 468886654 59999999999998765
No 366
>PLN02452 phosphoserine transaminase
Probab=99.17 E-value=1.7e-08 Score=100.77 Aligned_cols=288 Identities=16% Similarity=0.140 Sum_probs=173.6
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC--hHHHHhhhcCcEEEEeec
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPG--FDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~--~~~~~~~~~G~~~~~v~~ 173 (483)
..++-+.+.+.+.+.++ ++-+.+-+++..|++.++..++..|+.+||++++...++.+ +...++.. |...+....
T Consensus 50 f~~i~~~~~~~L~~l~~--~p~~y~v~~l~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~-g~~~~~~~~ 126 (365)
T PLN02452 50 FLSIIQKAEADLRELLD--IPDNYEVLFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKY-CKTNVIASG 126 (365)
T ss_pred HHHHHHHHHHHHHHHhC--CCCCceEEEEeCccHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHh-CCCcEEEec
Confidence 45555566666666655 21122335666889999999999999999998888766533 22334444 653333321
Q ss_pred CCCCCc--ccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 174 DSSNDF--KVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 174 ~~~~~~--~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+.++| .+++++++. +++++.|.+|+-...||..+. .+.++. ++++|+|.+-. +.. .+
T Consensus 127 -~~~~~~~~~~~~~~~~--------~~~~~~v~~~hnETstGv~~~--~~~~i~------~~~lvVDa~Ss---~g~-~p 185 (365)
T PLN02452 127 -KDEKYTKIPSVSEWEL--------TPDAKFVHICANETIHGVEFK--DYPDVG------NVPLVADMSSN---FLS-KP 185 (365)
T ss_pred -CCCCCCCCCChHHcCC--------CCCCcEEEECCCCCCCcEecC--cccccC------CCeEEEECCcc---ccC-cc
Confidence 12222 355655421 236788888888889999633 133332 27999999976 343 22
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH--------------hhhcCCCChHHHHH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK--------------MSSFGLVSSQTQHL 317 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~--------------~~~~~~~s~~~q~~ 317 (483)
.++..+ + ++ ..|..|.+|.+| +|.+++.++.+.. ... ...+++++.....+
T Consensus 186 -idv~~~---------~-v~-~~saqK~lGP~G--l~~v~vr~~~l~~-~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~ 250 (365)
T PLN02452 186 -VDVSKY---------G-VI-YAGAQKNVGPSG--VTIVIIRKDLIGN-ARPITPGMLDYKIHAENDSLYNTPPCFGIYM 250 (365)
T ss_pred -cCHHHc---------C-EE-EEecccccCCCC--eEEEEEcHHHHhh-cccCCCchhhHHHHHhcCCccCChhHHHHHH
Confidence 343322 3 23 359999999888 7888885444322 111 01112233333344
Q ss_pred HHHhcCChhHHHH--HHHHHHHHHHHHHHHHHHhhhcC-Cc-ee-ecC--CceEEEeeecCchhhccChHHHHHHHHHHH
Q 011570 318 IATMLSDDQFVEK--FIAESAKRIAERHKAFTWGLSQV-GI-GC-LKS--NAGLFLWMDLHHLLKEQTYEAEMALWRVII 390 (483)
Q Consensus 318 ~~~~l~~~~~~~~--~~~~~~~~l~~~~~~l~~~L~~~-gi-~~-~~~--~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll 390 (483)
+..+++ |+.+ -++...++.++..+++.+.|.+. |+ .. ..+ ...+.+.+.++.. ....+|.+.+.
T Consensus 251 l~~aL~---~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~------~~~~~f~~~~~ 321 (365)
T PLN02452 251 CGLVFE---DLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGS------ELEAEFVKEAA 321 (365)
T ss_pred HHHHHH---HHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCc------hhHHHHHHHHH
Confidence 444432 2332 25667778888889999999875 66 11 111 2445666676642 12335666554
Q ss_pred HhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 391 NEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 391 ~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
++|+...+|..-- .+ +|+++=. ++.++++.+++.++++-++
T Consensus 322 -~~g~~~~~G~r~~---gg-~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 322 -KAGMVQLKGHRSV---GG-MRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred -HCCCcccCCcccc---Cc-eEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 6699999987532 23 9999933 7999999999888887655
No 367
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.12 E-value=4.7e-08 Score=93.96 Aligned_cols=306 Identities=14% Similarity=0.125 Sum_probs=170.8
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh---cCCCCeEEEeCCCCcChHHHHhhhc
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL---ADPGDAFLVPTPYYPGFDRDLRWRT 164 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l---~~~gd~Vlv~~P~y~~~~~~~~~~~ 164 (483)
..|..++ ..+|-++++..+- -+-.-++++|+++||..+++... .+. -.|+-...+|.+......-+.
T Consensus 87 ~~~~~~p-i~~~Ae~L~s~~P--------~~l~~vfF~nsGsEANelal~mar~Yt~~-~diIa~r~~YHG~t~~t~glt 156 (442)
T KOG1404|consen 87 SGYLNPP-IHDLAEALVSKLP--------GDLKVVFFVNSGSEANELALKMARLYTGN-LDIIARRNSYHGNTLYTLGLT 156 (442)
T ss_pred ccccCCc-HHHHHHHHHHhCC--------CCceEEEEecCCchHHHHHHHHHHHhcCC-ceEEEeeccccCCchhhcccc
Confidence 3454433 5778888777653 24456999999999999988553 233 356666667765443322222
Q ss_pred CcEEEEeecC--------------CCCCcccC-----H----HHHHHHHHHHHhcCCceeEEEEeCC-CCCCcCC-CCHH
Q 011570 165 GVQLVPVVCD--------------SSNDFKVT-----M----EALEAAYEKAQESNIRIKGVLITNP-SNPLGTF-LDRE 219 (483)
Q Consensus 165 G~~~~~v~~~--------------~~~~~~~d-----~----~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~~-~~~~ 219 (483)
|......+.+ ..+.|.=+ - +.+++.+.. .++..-+-++.-| +.-.|.+ ++.-
T Consensus 157 ~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~---~~~~~vAafiaEtIqGvgG~v~~p~G 233 (442)
T KOG1404|consen 157 GLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILY---DGPETVAAFIAETIQGVGGIVELPPG 233 (442)
T ss_pred cCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHh---cCCCceeEEEeehhccCCccccCCch
Confidence 3222111111 00111111 2 334444432 1223333455544 5544554 4667
Q ss_pred HHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHH
Q 011570 220 TLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVS 299 (483)
Q Consensus 220 ~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~ 299 (483)
.+++..+.|+++|.++|.||+..+ |+....++++.+. +.+==+-|++|.+| .|+.+|.++. .+++.+
T Consensus 234 Ylka~~~~v~k~Ggl~IaDEVqtG--fGRtG~~wgfe~h---------~v~PDIvTmAKgiG-nG~Pl~AVvt-t~EIa~ 300 (442)
T KOG1404|consen 234 YLKAAYKVVRKRGGLFIADEVQTG--FGRTGHMWGFESH---------GVVPDIVTMAKGIG-NGFPLGAVVT-TPEIAD 300 (442)
T ss_pred HHHHHHHHHHHcCCEEEehhhhhc--ccccccccccccc---------CCCccHHHHHhhcc-CCCcceeeec-CHHHHH
Confidence 899999999999999999999988 4442233343322 11111339999999 9999999998 566777
Q ss_pred HHHHhh-hc--CCCChHHHHHHHHhcCC--hhHHHHHHHHHHHHHHHHHHHHHHhhhcC----CceeecCCceEEEeeec
Q 011570 300 CARKMS-SF--GLVSSQTQHLIATMLSD--DQFVEKFIAESAKRIAERHKAFTWGLSQV----GIGCLKSNAGLFLWMDL 370 (483)
Q Consensus 300 ~~~~~~-~~--~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----gi~~~~~~~g~f~~~~l 370 (483)
.+.+.. .+ ...++++.++..++|.- .+.+++...+.- .+|.+.|.++ .+.-....-|+++-+++
T Consensus 301 v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa~vG-------~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~ 373 (442)
T KOG1404|consen 301 VLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENAAEVG-------SYLLEKLAALKDKHPIIGDVRGRGLMLGVEL 373 (442)
T ss_pred HHHhccccccccCCCchhHHHHHHHHHHHHHHhHHHHHHHHH-------HHHHHHHHHHhhcCCceeecccceeEEEEEE
Confidence 765544 22 23566666555555432 111233333333 3344444433 22223345567887777
Q ss_pred Cchh-hccChH-HHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHH
Q 011570 371 HHLL-KEQTYE-AEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRI 430 (483)
Q Consensus 371 ~~~~-~~~~~~-~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L 430 (483)
-+.. +..... ....+..+-.+++|++|--|..++ ..+||+... +|.++++.+++..
T Consensus 374 V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G----~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 374 VSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHG----NVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred ecccCCCCCcchHHHHHHHHHHHHhCeeeecccccc----eEEEecCCeeccHHHHHHHHHHH
Confidence 4322 111111 122333444457799997776654 289999965 5999997666654
No 368
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=3.7e-09 Score=101.21 Aligned_cols=312 Identities=16% Similarity=0.201 Sum_probs=184.7
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEE
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQL 168 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~ 168 (483)
-|+...-+.+|.+.||+|++ ..+.|+...|-+ .+..++.+++.+||.|.+.+-........++.. .-.+
T Consensus 134 FYGt~DvHldlE~~iakF~G---------~E~aivYs~gF~-ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlS-RS~i 202 (467)
T KOG1358|consen 134 FYGTIDVHLDLEKRIAKFMG---------TEDAIVYSYGFS-TIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLS-RSTI 202 (467)
T ss_pred ccccceeecccHHHHHHhhC---------Ccceeeeccccc-hhhhcchhhhccCcEEEEehhhhHHHHHHHhhh-hhee
Confidence 46666557899999999998 567788877755 567788999999999999988777676666654 5556
Q ss_pred EEeecCCCCCcccCHHHHHHHHHHHH---hcCC---ceeE-EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccc
Q 011570 169 VPVVCDSSNDFKVTMEALEAAYEKAQ---ESNI---RIKG-VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIY 241 (483)
Q Consensus 169 ~~v~~~~~~~~~~d~~~l~~~i~~~~---~~~~---~~~~-i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay 241 (483)
+.+.. .|.+.++..+.+.. .+++ .++- |++.----+||.+.+ +.+|+++..+|...||.||.|
T Consensus 203 ~~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~ 272 (467)
T KOG1358|consen 203 SYFKH-------NDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESL 272 (467)
T ss_pred EEecC-------CCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEeccc
Confidence 55553 35677766554321 1111 1232 333344567999999 888888888999999999999
Q ss_pred ccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh-hc-C--CCChHHHHH
Q 011570 242 AATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS-SF-G--LVSSQTQHL 317 (483)
Q Consensus 242 ~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~-~~-~--~~s~~~q~~ 317 (483)
+..+.+.... .+.+... ++ ..+..++++|++-+++..| |++.+ ...+...-+-.. .+ . ..++....+
T Consensus 273 SfG~lg~~Gr--GvteH~~-v~--~~~iDiv~~sm~~alas~G---gFc~G-~~~i~~hQrLSg~~Y~fSAslPp~la~a 343 (467)
T KOG1358|consen 273 SFGVLGKTGR--GVTEHFG-VP--ITDIDIVTASMETALASGG---GFCAG-KSFIADHQRLSGSGYCFSASLPPYLAGA 343 (467)
T ss_pred ccccccccCc--cccccCC-CC--ccceeeeeecccccccccC---ceeec-ceeeEeeeeccccceeeeccCchhhhhh
Confidence 8655443111 1111110 00 1355678899999887666 78887 444333221111 11 1 122222223
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecCchhhccCh--HHHHHHHHHHHHhcC
Q 011570 318 IATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLHHLLKEQTY--EAEMALWRVIINEVK 394 (483)
Q Consensus 318 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~~~~~~~~~--~~~~~~~~~Ll~~~g 394 (483)
+...+.-.++ -.+..+.++.....+...|... ++.+....-...+.+.+......... .--.++....+.+ |
T Consensus 344 a~~ai~i~~~----~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~ 418 (467)
T KOG1358|consen 344 AIKAILIEEW----NPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-G 418 (467)
T ss_pred HHHHHHHHhh----CcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhh-c
Confidence 3333322221 1223344555555566666655 56666554455666666543222211 1112344555555 7
Q ss_pred eEeeCCCCCCC----CCCCEEEEEecc-CCHHHHHHHHHHHHHHHH
Q 011570 395 LNVSPGSSFHC----PNPGWFRVCFAN-MDDRTMEIALSRITSFML 435 (483)
Q Consensus 395 V~v~pg~~f~~----~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~ 435 (483)
+++.....-.. .-+.-+||++.. .++|+++++...|++...
T Consensus 419 ~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~ 464 (467)
T KOG1358|consen 419 VLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVAS 464 (467)
T ss_pred ceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 77654432211 113359999965 699999999999987654
No 369
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.06 E-value=4.7e-08 Score=93.75 Aligned_cols=233 Identities=19% Similarity=0.221 Sum_probs=127.5
Q ss_pred CChhHHHHHHHHHhcCCCCeEEE-eCCCCcChHHHHhhh---------cCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 126 GGATGAHETVAFCLADPGDAFLV-PTPYYPGFDRDLRWR---------TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 126 ~G~~~al~~~~~~l~~~gd~Vlv-~~P~y~~~~~~~~~~---------~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
-++|++|..++..+++|||+++. ...-|......+... .|++...+++.+++ .+|.+.++++++.
T Consensus 79 vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg--~~D~~~i~~~~~~--- 153 (403)
T PF06838_consen 79 VSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDG--TIDWEAIKKALKP--- 153 (403)
T ss_dssp -SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTS--SB-HHHHHHHHHT---
T ss_pred cchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCC--CcCHHHHHHhhcc---
Confidence 46899999999999999999884 445577666665321 37899999998755 7999999999984
Q ss_pred cCCceeEEEEe-CCCCCCcCCCCHHHHHHHHHHHhhc--CcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEE
Q 011570 196 SNIRIKGVLIT-NPSNPLGTFLDRETLKDIVSFINEK--NIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHI 272 (483)
Q Consensus 196 ~~~~~~~i~l~-~P~NPtG~~~~~~~l~~i~~~a~~~--~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~ 272 (483)
++|+|++. +-..-+=..++.++++++++++++. ++++++|.+|+++ .+..++ . ...-.++
T Consensus 154 ---~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEF--vE~~EP-~-----------~vGADl~ 216 (403)
T PF06838_consen 154 ---NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEF--VETQEP-T-----------EVGADLM 216 (403)
T ss_dssp ---TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTT--TSSS-G-G-----------GGT-SEE
T ss_pred ---CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCccee--ccccCc-c-----------ccchhhe
Confidence 89999887 3344455568999999999999774 7899999999995 431221 1 1244578
Q ss_pred EecCccccCCCCce--EEEEEecChHHHHH-HHHhhhcCCCC--hHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHH
Q 011570 273 VYSLSKDMGFPGFR--VGIIYSYNDQVVSC-ARKMSSFGLVS--SQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFT 347 (483)
Q Consensus 273 ~~S~SK~~g~~GlR--iG~li~~~~~l~~~-~~~~~~~~~~s--~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~ 347 (483)
.+|+=|..| .|+- -||+++. +++.+. ..++..++... ..+.-....+++ +-++..+. ...--+-..+..
T Consensus 217 aGSLIKNpG-GgiAptGGYIaGr-~~lVe~~a~RLTaPGiG~e~G~t~~~~R~~~Q-GlFlAP~v---V~eAlKgaif~A 290 (403)
T PF06838_consen 217 AGSLIKNPG-GGIAPTGGYIAGR-KDLVERAAYRLTAPGIGKEVGATLGTNRLMFQ-GLFLAPHV---VGEALKGAIFAA 290 (403)
T ss_dssp EEETTSGGG-TTT-SS-EEEEES-HHHHHHHHHHHS-TTTGGGSS--TTTHHHHHH-HHHHHHHH---HHHHHHHHHHHH
T ss_pred eccceeCCC-CCccCcCCEEech-HHHHHHHHhhhcCCccccccccCcchHHHHHh-HHhhchHH---HHHHHHHHHHHH
Confidence 999999987 5532 4799995 555444 44444332100 000000001111 11211111 111122234455
Q ss_pred HhhhcCCceeecCC----ceEEEeeecCchhhccChHHHHHHHHHHHHh
Q 011570 348 WGLSQVGIGCLKSN----AGLFLWMDLHHLLKEQTYEAEMALWRVIINE 392 (483)
Q Consensus 348 ~~L~~~gi~~~~~~----~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~ 392 (483)
..|+++|+++.|.. .-....+++... +.-..||+.+.+.
T Consensus 291 ~~fe~lG~~v~P~~~~~R~DiIQai~l~~~------e~l~~FC~~iQ~~ 333 (403)
T PF06838_consen 291 ALFEKLGFEVSPKPDDPRSDIIQAIELGSP------EKLIAFCQGIQAA 333 (403)
T ss_dssp HHHHHTT-EEES-TTS--SSS-EEEE-SSH------HHHHHHHHHHHHT
T ss_pred HHHHHcCCcCCCCCCCCCCceEEEEECCCH------HHHHHHHHHHHhc
Confidence 66777899887643 334555555532 2234677766543
No 370
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.04 E-value=1.9e-07 Score=90.47 Aligned_cols=301 Identities=15% Similarity=0.147 Sum_probs=167.8
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC---CC-----CeEEEeCCCCcChHHHHhhhcCcEE
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD---PG-----DAFLVPTPYYPGFDRDLRWRTGVQL 168 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~---~g-----d~Vlv~~P~y~~~~~~~~~~~G~~~ 168 (483)
-++.+.+.+.+++ -+++.|++.|.+++|+..++....+ .+ ..|+....+|.+-...+...++...
T Consensus 101 v~l~~~l~~~~~~-------~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~ 173 (433)
T KOG1401|consen 101 VELEEVLSAVLGK-------GSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSK 173 (433)
T ss_pred HHHHHHHHhcccC-------CCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccc
Confidence 4445555554432 2789999999999999998865421 11 2488888888664333222123322
Q ss_pred EEeecCCC------CCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHhhcCcEEEEcccc
Q 011570 169 VPVVCDSS------NDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIY 241 (483)
Q Consensus 169 ~~v~~~~~------~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay 241 (483)
...|.++- ..+ -|.+.+++.++.+ ...+.+|++.--.--.|... +++.+..|.+.|+++|+++|.||+.
T Consensus 174 y~~~~~p~~p~v~~~~y-nd~t~l~k~~~~h---~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~ 249 (433)
T KOG1401|consen 174 YGLPFDPIAPDVVTAEY-NDSTALEKLFESH---KGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQ 249 (433)
T ss_pred cCCCCCCCCCceeeccc-CCHHHHHHHHHhC---CCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhh
Confidence 22222110 011 2688999988763 12366666654465566644 7788999999999999999999999
Q ss_pred ccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc-----CCCChHHHH
Q 011570 242 AATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF-----GLVSSQTQH 316 (483)
Q Consensus 242 ~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~-----~~~s~~~q~ 316 (483)
-++...+ . .-..++.. ..+| +.++.|.+| .|+.+|..++ .+.+.+.+..-.++ .+.++++..
T Consensus 250 tG~gR~g-~--~~a~e~~~----~~PD----I~t~aK~L~-gGlPigA~~v-~~kV~~~i~~~~~l~hg~Tf~gnpLacs 316 (433)
T KOG1401|consen 250 TGLGRLG-Y--GWAQEYFG----VTPD----ITTVAKPLG-GGLPIGATGV-RDKVAEMISPGDHLYHGGTFSGNPLACS 316 (433)
T ss_pred hCccccc-h--HHHHHHhC----cCCc----ceeehhhcc-CCceeEEEee-hHHHHhhcCCCCccccCcccCCChhhhh
Confidence 8753333 1 22233322 0223 347899998 9999999998 56666665432221 234666665
Q ss_pred HHHHhc---CChhHHHHHHHHHHHHHHHHHHHHHHhhhcC--CceeecCCceEEEeeecCchhhcc--ChHHHHHH----
Q 011570 317 LIATML---SDDQFVEKFIAESAKRIAERHKAFTWGLSQV--GIGCLKSNAGLFLWMDLHHLLKEQ--TYEAEMAL---- 385 (483)
Q Consensus 317 ~~~~~l---~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--gi~~~~~~~g~f~~~~l~~~~~~~--~~~~~~~~---- 385 (483)
++...+ .++++ +++...+-+..++.+.+.+.+. ++.-. -..++++.+.+....... .-.....+
T Consensus 317 a~~~~l~~l~~~e~----~k~vs~~~k~L~~~l~e~~~~~~~~i~g~-~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~ 391 (433)
T KOG1401|consen 317 AGIKVLDELKDPET----LKNVSKIGKELRKLLDEYLKKTPNSICGG-VGRGLVIGFEFEGPVYKFADAAREQGLLILTL 391 (433)
T ss_pred HHHHHHHHHcCHHH----HHHHHHHHHHHHHHHHHHhccCCCceeee-eeeEEEEEEEEeechhhhhhhhhhhhHHHHHH
Confidence 555444 34444 3444444445555566666554 23322 233455554443211110 00001111
Q ss_pred HHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhh
Q 011570 386 WRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 386 ~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
..-+++ .||.++| . ++ +++. .++|.++.+++.+.+.+.+..
T Consensus 392 ~~~~~~-~gv~i~P--~-------~~-l~~~-~~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 392 GKGLLE-EGVRIAP--I-------YL-LTVE-HTPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred hccccc-ceEEEec--c-------cc-cccc-CcHHHHHHHHHHHHHHHHHhc
Confidence 111221 2444444 0 00 2222 358889999999988887653
No 371
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.02 E-value=1.3e-08 Score=101.17 Aligned_cols=210 Identities=16% Similarity=0.111 Sum_probs=122.3
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-------CC-CCeEEEeCCCCcChHHHHhhhcC-
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-------DP-GDAFLVPTPYYPGFDRDLRWRTG- 165 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-------~~-gd~Vlv~~P~y~~~~~~~~~~~G- 165 (483)
...+...++++.+.+..+ -..+.+++++++++++..++.... .+ -.+|+...-+|.+.........+
T Consensus 56 ~~~~~~~~la~~L~~~~p----~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~ 131 (339)
T PF00202_consen 56 FTHPEAAELAEKLAELFP----GGLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGN 131 (339)
T ss_dssp SEEHHHHHHHHHHHHHSS----TTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSS
T ss_pred eeccchhhhhhhhhhccc----cccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCC
Confidence 346677778888776642 245689999999999999997765 22 36899999888764332211101
Q ss_pred -----------cEEEEeecCCCCC---cccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHHHHHHhh
Q 011570 166 -----------VQLVPVVCDSSND---FKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDIVSFINE 230 (483)
Q Consensus 166 -----------~~~~~v~~~~~~~---~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~~~a~~ 230 (483)
..+..+|.++... ..-....+++.+.+.. ..++.+|++..-..-.|.. .+.+.+++|.++|++
T Consensus 132 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~ 209 (339)
T PF00202_consen 132 PPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALN--ADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCRE 209 (339)
T ss_dssp THHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHH--GGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHH
T ss_pred ccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhc--CCcEEEEEEeccccccCccccccchhhehcccccc
Confidence 2345555442110 0001222344433322 2356666655434445654 467789999999999
Q ss_pred cCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--hcC
Q 011570 231 KNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--SFG 308 (483)
Q Consensus 231 ~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--~~~ 308 (483)
||+++|.||++.++...+ . +.....+.- .+| ++ +++|.++ .|+.+|.+++ .+.+.+.+.... ..+
T Consensus 210 ~gillI~DEV~tG~gRtG-~-~~a~~~~gv-----~PD--iv--~~gK~l~-gG~p~sav~~-~~~i~~~~~~~~~~~T~ 276 (339)
T PF00202_consen 210 HGILLIADEVQTGFGRTG-K-FFASEHYGV-----DPD--IV--TFGKGLG-GGLPISAVLG-SEEIMEAFQPGSHGSTF 276 (339)
T ss_dssp TT-EEEEEETTTTTTTTS-S-SSGHHHHTS-----SSS--EE--EEEGGGG-TTSSEEEEEE-EHHHHTTSCTTSSTCTT
T ss_pred cccceecccccccccccC-C-ccceecccc-----cCc--cc--ccccchh-hhhhcccccc-cchhhcccccccccccc
Confidence 999999999998853333 3 333333211 233 33 5579998 8899999999 455555432211 112
Q ss_pred CCChHHHHHHHHhcC
Q 011570 309 LVSSQTQHLIATMLS 323 (483)
Q Consensus 309 ~~s~~~q~~~~~~l~ 323 (483)
..++++..++.+.|+
T Consensus 277 ~g~p~~~aaa~~~l~ 291 (339)
T PF00202_consen 277 GGNPLSCAAALATLE 291 (339)
T ss_dssp TT-HHHHHHHHHHHH
T ss_pred ccchHhhhhhhhHHH
Confidence 345666666555543
No 372
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.97 E-value=3.9e-07 Score=88.96 Aligned_cols=317 Identities=16% Similarity=0.223 Sum_probs=181.4
Q ss_pred cccccCCCC---CCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhH---HHHHHHHHhcCCC----CeEEEeCCCCc
Q 011570 85 KGIAIFQDY---HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATG---AHETVAFCLADPG----DAFLVPTPYYP 154 (483)
Q Consensus 85 ~~~~~Y~~~---~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~---al~~~~~~l~~~g----d~Vlv~~P~y~ 154 (483)
..++.|.+. +|+.++-..+.+|+.+..| .+.=.+-..+|++. ++.++=...-..| +.||+|+-.|+
T Consensus 93 ~~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG----~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHG 168 (496)
T COG1003 93 ANIHPFQPEEQVQGYLELIYELQEWLKEITG----MDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHG 168 (496)
T ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHHhcC----CceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccC
Confidence 345555443 4788899999999998766 33334444566553 3333322233344 58999999998
Q ss_pred ChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcE
Q 011570 155 GFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIH 234 (483)
Q Consensus 155 ~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~ 234 (483)
.--.++... |.+|+.|+.+++| .+|+++|++++.+ ++.++.++|||. .|.. ++.+.+|+++.+++|..
T Consensus 169 TNPASAam~-G~~VV~V~~~~~G--~VDlddLk~k~~~------~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~ 236 (496)
T COG1003 169 TNPASAAMA-GFKVVVVKCDENG--NVDLDDLRAKAED------NLAALMITNPST-LGVF--EEDIREICEIVHEAGGQ 236 (496)
T ss_pred CChhhHhhc-CceEEEEecCCCC--CccHHHHHHHhcc------ceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCE
Confidence 887777765 9999999998765 7999999999874 889999999986 4543 56799999999999999
Q ss_pred EEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC----CCceEEEEEecChHHHHHHHH-------
Q 011570 235 LVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF----PGFRVGIIYSYNDQVVSCARK------- 303 (483)
Q Consensus 235 iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~----~GlRiG~li~~~~~l~~~~~~------- 303 (483)
+..|.+=..-..+- .. +. +..-.|+=--++|+|+. .|-..|=|.. .+.+...+..
T Consensus 237 vY~DGANlNA~vG~-~r-PG-----------d~G~DV~HlNLHKTF~iPHGGGGPG~GPvgV-k~~L~pfLP~p~~~~~~ 302 (496)
T COG1003 237 VYYDGANLNAIVGL-AR-PG-----------DMGFDVVHLNLHKTFCIPHGGGGPGAGPVGV-KAHLAPFLPGPVVYHDV 302 (496)
T ss_pred EEecCcchhhhhcc-cc-cc-----------ccccceEEeecccccccCCCCCCCCCCceeh-HhhccccCCCCcccCCC
Confidence 99999864322222 11 11 11111222256677632 2333454333 1222211110
Q ss_pred ---------------hhhc-CCCChH-HHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecC--Cce
Q 011570 304 ---------------MSSF-GLVSSQ-TQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKS--NAG 363 (483)
Q Consensus 304 ---------------~~~~-~~~s~~-~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~--~~g 363 (483)
...+ ++.+.+ ...+-..++..++ +++.-+.-.-+.+++.+.|+.. .+.+.+. -..
T Consensus 303 ~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~G-----L~~ase~AvLNANYia~rL~~~y~~~y~~~~~~~H 377 (496)
T COG1003 303 GEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADG-----LKQASEVAVLNANYIARRLKGYYPVPYTGENRVAH 377 (496)
T ss_pred ccccccCCCCccceeeccccCcchHHHHHHHHHHHHhHHH-----HHHHHHHHHHhHHHHHHHhhhcCccccCCCCccee
Confidence 0111 111100 0011111222221 2333333344567888888763 2322222 111
Q ss_pred EEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhhc
Q 011570 364 LFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 364 ~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
=|+ ++......... ....+++++|+. +|+. .|--.|...-.+.+-|=... .+.+++|+++++|.++.++.++.
T Consensus 378 E~i-ld~r~l~~~~G-v~~~DvAKrLlD-~GfH-aPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~ 451 (496)
T COG1003 378 ECI-LDARPLKKETG-VRALDVAKRLLD-YGFH-APTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADAV 451 (496)
T ss_pred EEE-eechHhHhhcC-CcHHHHHHHHHh-cCCC-CCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 122 33332222111 235689999995 6886 34334542234556665543 37789999999998877776644
No 373
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.94 E-value=2.4e-07 Score=87.15 Aligned_cols=294 Identities=15% Similarity=0.168 Sum_probs=170.9
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc------C--C-CCe-EEEeCCCCcC-hHHHHhhh-
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA------D--P-GDA-FLVPTPYYPG-FDRDLRWR- 163 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~------~--~-gd~-Vlv~~P~y~~-~~~~~~~~- 163 (483)
+.++-.+.++++...+| -+.|+.+|.+.|+...++.... + | ... |+....+|.+ ...++...
T Consensus 99 Ynd~~~~f~~~vt~lf~------~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~ 172 (427)
T KOG1402|consen 99 YNDVLGEFAEYVTKLFG------YDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLST 172 (427)
T ss_pred hhhhHHHHHHHHHHhcC------cceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecC
Confidence 35566667777776654 4678888888999888876542 1 3 223 3333344432 11111100
Q ss_pred -------cC----cEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCH-HHHHHHHHHHhhc
Q 011570 164 -------TG----VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDR-ETLKDIVSFINEK 231 (483)
Q Consensus 164 -------~G----~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~-~~l~~i~~~a~~~ 231 (483)
+| ..+..+|. -|.++|+.++.+ +++.++++...+--.|.++|. ..+.+..++|.+|
T Consensus 173 d~ds~~~fgp~~P~~~~~v~Y-------~d~eale~~l~~-----~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtky 240 (427)
T KOG1402|consen 173 DPDSWDGFGPFLPGVVDKVPY-------GDAEALEVALKS-----PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKY 240 (427)
T ss_pred CcchhhccCCCCCCcceeecc-------CCHHHHHHHhcC-----CCeeEEEeeccccccceEeCCchhHHHHHHHHHhh
Confidence 01 00111221 178999998875 467666555448888887754 4699999999999
Q ss_pred CcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh--hhcC
Q 011570 232 NIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM--SSFG 308 (483)
Q Consensus 232 ~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~--~~~~ 308 (483)
|+++|.||+..++..++ ++... ++.. . .+|.|+ |.|+++ .| +.+..+++ ++++.-.++.. .+.+
T Consensus 241 nvl~I~DEvQTGl~RTG--k~la~-d~en-v---~PDivi----lgKalS-GG~~Pvsavl~-~~~im~~~~pgeHgsTy 307 (427)
T KOG1402|consen 241 NVLLIADEVQTGLARTG--KLLAC-DYEN-V---RPDIVI----LGKALS-GGVYPVSAVLA-DDDIMLNIKPGEHGSTY 307 (427)
T ss_pred cEEEEehhhhhcccccC--cEEEe-ehhh-c---CCCeEE----Eecccc-CCeeeeEEEEe-cHHHHhccCCCcccccc
Confidence 99999999998865443 22221 1111 0 233333 368887 55 67888888 45444433321 1123
Q ss_pred CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC--c----eeecCCceEEEeeecCchhhccChHHH
Q 011570 309 LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVG--I----GCLKSNAGLFLWMDLHHLLKEQTYEAE 382 (483)
Q Consensus 309 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g--i----~~~~~~~g~f~~~~l~~~~~~~~~~~~ 382 (483)
..+++..+++.++|.- +.+ +...++....-..|...|.++. + .... .-|++..+.+.... ....++
T Consensus 308 ggNpLg~~vaiAalev---i~e--ekL~era~~lG~~l~~~L~~l~~~~p~~v~~VR-GrGl~~ai~i~~~~--~~~~~a 379 (427)
T KOG1402|consen 308 GGNPLGCAVAIAALEV---IVE--EKLVERAAKLGEILRDQLNKLQKKFPHVVKEVR-GRGLLNAIVINPSK--TSGQDA 379 (427)
T ss_pred CCChHHHHHHHHHHHH---HHH--HHHHHHHHHHHHHHHHHHHhccccccchhheee-ccceEEEEEecccc--ccchhH
Confidence 3677777766666532 111 2223333444456666776652 2 2233 33577777664311 111345
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHH
Q 011570 383 MALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFML 435 (483)
Q Consensus 383 ~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~ 435 (483)
.+++-.+- +.|++--|-. .+-||++... +++++++++++.|.+.+.
T Consensus 380 w~~cl~lk-~~g~LAkptH------~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 380 WDVCLALK-ENGLLAKPTH------GNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred HHHHHccc-ccccccCCCC------CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 56666654 5587755432 3479999876 599999999999988763
No 374
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.90 E-value=1.7e-06 Score=85.77 Aligned_cols=330 Identities=11% Similarity=0.108 Sum_probs=177.1
Q ss_pred cccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcE-EEeC
Q 011570 48 VIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRI-VMSG 126 (483)
Q Consensus 48 ~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i-~it~ 126 (483)
.++|+.+.-.+|.+.++++..+... +...++.-+ +..+.+ .-..++-+.+.+.+.+.++ ++ +..+| +++.
T Consensus 5 ~~nF~aGPa~lp~~Vl~~~~~~~~~---~~~~g~si~-eisHRs--~~F~~i~~~~~~~Lr~Ll~--~P-~~y~Vlfl~G 75 (364)
T PRK12462 5 QLNFSGGPGALPDTVLEQVRQAVVE---LPETGLSVL-GMSHRS--SWFSSLLAQAEADLRDLLG--IP-DEYGVVFLQG 75 (364)
T ss_pred cceecCCCcCCCHHHHHHHHHHHhc---ccccCcccc-cccccc--HHHHHHHHHHHHHHHHHhC--CC-CCCeEEEEec
Confidence 3577777666666666555433211 001111111 122222 2245555556666666655 22 12245 5556
Q ss_pred ChhHHHHHHHHHhcCCCCeEE-EeCCC-CcC-hHHHHhhhcCcEEEEeecCCCCCc--ccCHHHHHHHHHHHHhcCCcee
Q 011570 127 GATGAHETVAFCLADPGDAFL-VPTPY-YPG-FDRDLRWRTGVQLVPVVCDSSNDF--KVTMEALEAAYEKAQESNIRIK 201 (483)
Q Consensus 127 G~~~al~~~~~~l~~~gd~Vl-v~~P~-y~~-~~~~~~~~~G~~~~~v~~~~~~~~--~~d~~~l~~~i~~~~~~~~~~~ 201 (483)
|++.++..+...|+.+||+++ +..-+ |+. +...++.. | ++..+......+| -++++.++. +++.+
T Consensus 76 ggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~-g-~v~~~~~~~~~~~~~~p~~~~~~~--------~~d~~ 145 (364)
T PRK12462 76 GSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRV-A-AMRVVWDGAASGYRTLPSLAELDW--------DARAP 145 (364)
T ss_pred cHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhc-C-CceEecCcCCCCCCcCCCHHHhcc--------CCCCc
Confidence 699999999999999999655 44444 432 22333443 5 4433332111122 344555421 23567
Q ss_pred EEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccC
Q 011570 202 GVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG 281 (483)
Q Consensus 202 ~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g 281 (483)
.|.+|+-...||..++ ++.+.++.++|+|-+-. +.. .+ ..+.. + .++..|.-|.+|
T Consensus 146 ~v~~t~NETstGv~~~--------~~~~~~~~llvvD~sS~---~~s-~p-id~~~---------~--dvi~agsQKnlg 201 (364)
T PRK12462 146 FRHYVSNETVEGLQFP--------DAAGLPDSPLIADMSSD---FMS-RP-FDVEA---------Y--GMVYAHAQKNLG 201 (364)
T ss_pred EEEEccCCCCceEecC--------cccccCCCeEEEEcCch---hhC-CC-CChHH---------c--cEEEeeccccCC
Confidence 7888877778999986 22223688999999975 333 22 23222 2 355678899999
Q ss_pred CCCceEEEEEecChHHHHHHH-------------HhhhcCCCChHHHHHHHHhcCChhHH-HH--HHHHHHHHHHHHHHH
Q 011570 282 FPGFRVGIIYSYNDQVVSCAR-------------KMSSFGLVSSQTQHLIATMLSDDQFV-EK--FIAESAKRIAERHKA 345 (483)
Q Consensus 282 ~~GlRiG~li~~~~~l~~~~~-------------~~~~~~~~s~~~q~~~~~~l~~~~~~-~~--~~~~~~~~l~~~~~~ 345 (483)
.|| ++.++.+++.+..... ....+++++....+++...++ |+ ++ -++...++.++..+.
T Consensus 202 P~G--ltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~---~i~~e~GGl~~~~~r~~~ka~~ 276 (364)
T PRK12462 202 PAG--VTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLR---WIRDEIGGVHAMRDINARKAAM 276 (364)
T ss_pred CCc--eEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHH---HHHHhccCHHHHHHHHHHHHHH
Confidence 887 5777775444322111 011123333344444433322 11 11 245555666777788
Q ss_pred HHHhhhcCC-ceee----cCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CC
Q 011570 346 FTWGLSQVG-IGCL----KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MD 419 (483)
Q Consensus 346 l~~~L~~~g-i~~~----~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~ 419 (483)
+.+.+.+.. +-.. ...+-+-+.+++++. ..+.+|.+. ++++|+.-..|.. .-|.+|+|+=. ++
T Consensus 277 ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~------~l~~~f~~~-a~~~gl~~lkGhr----~vgg~Ras~yna~~ 345 (364)
T PRK12462 277 LYATLDALNEVIDCHAHRAARSTMNVAFRFRQP------RLDTLFKEQ-STEAGFCGLSGHR----SIGGIRASLYNAVS 345 (364)
T ss_pred HHHHHHhCCCcccCCCChhhcCcceEEEEcCCH------HHHHHHHHH-HHHCCCccccCCc----ccCceEEEcCCCCC
Confidence 888887763 3221 123345666666542 113344444 4467988766643 23459999943 58
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011570 420 DRTMEIALSRITSFMLK 436 (483)
Q Consensus 420 ~e~l~~~l~~L~~~l~~ 436 (483)
.|.++.+++-++++-++
T Consensus 346 ~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 346 EQAVSRLCAFLKDFAIR 362 (364)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 77777777766665543
No 375
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.88 E-value=5.3e-07 Score=83.72 Aligned_cols=294 Identities=11% Similarity=0.160 Sum_probs=171.3
Q ss_pred CCcEEEeCChhHHHHHHHHHh---cCCCCeEEEeCCCCcChHHHHhhh------cCc-----EEEEe-ecCC--CCCcc-
Q 011570 119 PDRIVMSGGATGAHETVAFCL---ADPGDAFLVPTPYYPGFDRDLRWR------TGV-----QLVPV-VCDS--SNDFK- 180 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l---~~~gd~Vlv~~P~y~~~~~~~~~~------~G~-----~~~~v-~~~~--~~~~~- 180 (483)
-+-++++|+++++..++++.. .+.-| ||+.+..|.+.....-.. .|. +.+.+ |.++ .+.|.
T Consensus 102 Lsvc~F~NSGSEANDLALRLAR~ftkhqD-vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~ 180 (452)
T KOG1403|consen 102 LSVCFFVNSGSEANDLALRLARNFTKHQD-VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRD 180 (452)
T ss_pred ceEEEEecCCchhhHHHHHHHHhhcccCc-eEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCcccccccccc
Confidence 456888999999999998764 33444 566666765543321110 111 11111 1111 11111
Q ss_pred ----------cCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHH-HHHHHHHHHhhcCcEEEEccccccCccCCC
Q 011570 181 ----------VTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRE-TLKDIVSFINEKNIHLVCDEIYAATVFTKE 249 (483)
Q Consensus 181 ----------~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~-~l~~i~~~a~~~~~~iI~Deay~~~~~~~~ 249 (483)
.-.+.+++.+.+..+.+.++.+.+-.+-+.=.|+++|+. ..+++++..+.+|.+.|.||+.-++..-+
T Consensus 181 ~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG- 259 (452)
T KOG1403|consen 181 KMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVG- 259 (452)
T ss_pred ccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccc-
Confidence 124567777777777776666555445566677777654 58999999999999999999998754334
Q ss_pred CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH-----hhhcCCCChHHHHHHHHhc--
Q 011570 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK-----MSSFGLVSSQTQHLIATML-- 322 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~-----~~~~~~~s~~~q~~~~~~l-- 322 (483)
..++++.-+ +.-..|+ ++.|.+| .|..++.+++ .+++.+.+.. +..++ .++.+-++..+.+
T Consensus 260 ~hyWafq~y-------~fiPDIV--tmgKpmG-NGhPVa~Vat-tkeIA~Af~atgv~YFNTyG-GnPVsCAv~laVm~v 327 (452)
T KOG1403|consen 260 SHYWAFQTY-------NFIPDIV--TMGKPMG-NGHPVAAVAT-TKEIAQAFHATGVEYFNTYG-GNPVSCAVGLAVMRV 327 (452)
T ss_pred hhhhhhhhh-------ccccchh--eecccCC-CCCeeeEEec-cHHHHHHhccccceehhccC-CCchhHHHHHHHHHH
Confidence 445554333 1112233 7889999 9999999998 5777777654 22333 5666655544443
Q ss_pred -CChhHHHHHHHHHHHHHHHHHHHHHHhhhcC--Cceee--cCCceEEEeeecCchhhcc--ChHHHHHHHHHHHHhcCe
Q 011570 323 -SDDQFVEKFIAESAKRIAERHKAFTWGLSQV--GIGCL--KSNAGLFLWMDLHHLLKEQ--TYEAEMALWRVIINEVKL 395 (483)
Q Consensus 323 -~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--gi~~~--~~~~g~f~~~~l~~~~~~~--~~~~~~~~~~~Ll~~~gV 395 (483)
+++. ++++.++.-.. +...|++. ..++. ...-|+|+-+++-+.-... .-+...-+..+|.+.++|
T Consensus 328 ~e~E~-Lq~ha~~vG~~-------L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~V 399 (452)
T KOG1403|consen 328 CEDEN-LQEHAQQVGEK-------LEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRV 399 (452)
T ss_pred Hhhhh-HHHHHHHHHHH-------HHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhE
Confidence 3332 23333333222 22233222 11222 3355789999885432221 112333456677778889
Q ss_pred EeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 396 NVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 396 ~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
++..- ++..+-+.|-..- .+++..++.+..|.+++.-..
T Consensus 400 LlsaD----GPh~NilKiKPPmCFneena~e~v~~ld~iLT~me 439 (452)
T KOG1403|consen 400 LLSAD----GPHRNILKIKPPMCFNEENADEFVLGLDEILTVME 439 (452)
T ss_pred EEecC----CCCCceeecCCCcccChhhHHHHHHHHHHHHHHHH
Confidence 88632 1234456555422 488889999999988887543
No 376
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.80 E-value=1.7e-06 Score=81.57 Aligned_cols=271 Identities=15% Similarity=0.120 Sum_probs=164.9
Q ss_pred cCCCcEEEeCChhHHHHHHHHHhcC--CCCeEEEeCCC-CcC----hHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHH
Q 011570 117 FDPDRIVMSGGATGAHETVAFCLAD--PGDAFLVPTPY-YPG----FDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAA 189 (483)
Q Consensus 117 ~~~~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~P~-y~~----~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~ 189 (483)
..+.+++++++++-.++.++.+.++ +|+.||+++-. |+. ....+..+ |.. .+- ...+.+++++++
T Consensus 91 A~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~-~~~-----~~~--~~~~~P~~~~~~ 162 (407)
T COG3844 91 ARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLL-GIG-----YDL--EGVIAPRALEEA 162 (407)
T ss_pred CCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhh-ccc-----ccc--eeeeChHHHHHh
Confidence 5789999999999999999888754 48888888643 322 22233332 322 111 113467788888
Q ss_pred HHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCe
Q 011570 190 YEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNL 269 (483)
Q Consensus 190 i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~ 269 (483)
+.+ ++.+|++++.|.-||+.++ +.+|-.+++++|++++-|=+|+...+. .. +. ..+.
T Consensus 163 ~~d------d~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGavp-----~~---Lh------~~ga 219 (407)
T COG3844 163 ITD------DVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAVP-----VD---LH------AAGA 219 (407)
T ss_pred hcc------ceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCCcc-----ee---ec------ccCC
Confidence 875 7888899999999999999 889999999999999999999743222 11 11 2244
Q ss_pred EEEEecCccccC-CCCceEEEEEecChHHHHHHHHhhhc------------------------CCCChHHHHHHHHhcCC
Q 011570 270 IHIVYSLSKDMG-FPGFRVGIIYSYNDQVVSCARKMSSF------------------------GLVSSQTQHLIATMLSD 324 (483)
Q Consensus 270 vi~~~S~SK~~g-~~GlRiG~li~~~~~l~~~~~~~~~~------------------------~~~s~~~q~~~~~~l~~ 324 (483)
.+-+++.-|.++ -||-.. ++.+.++.........+.+ ++.+..+..++...|.-
T Consensus 220 DfaigcsyKYLNgGPGapa-~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDi 298 (407)
T COG3844 220 DFAIGCSYKYLNGGPGAPA-GLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDI 298 (407)
T ss_pred CeeeeeeceeccCCCCCce-eEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhh
Confidence 566788888864 255443 4444222111111111111 11111222222222221
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcC----CceeecCCc----eEEEeeecCchhhccChHHHHHHHHHHHHhcCeE
Q 011570 325 DQFVEKFIAESAKRIAERHKAFTWGLSQV----GIGCLKSNA----GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLN 396 (483)
Q Consensus 325 ~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----gi~~~~~~~----g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~ 396 (483)
.. +--+.+.++.--...+++++.++.. ++++..|.. |-.+-+..|. ..++++.|. ++||.
T Consensus 299 fa--~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~---------~~~V~qaLi-~rGVi 366 (407)
T COG3844 299 FA--DVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPH---------GYQVMQALI-DRGVI 366 (407)
T ss_pred hh--hcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCc---------HHHHHHHHH-HcCcc
Confidence 11 1124556666666678888777654 455444322 2244444442 236677777 45986
Q ss_pred eeCCCCCCCCCCCEEEEEecc--CCHHHHHHHHHHHHHHHHHh
Q 011570 397 VSPGSSFHCPNPGWFRVCFAN--MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 397 v~pg~~f~~~~~~~iRis~~~--~~~e~l~~~l~~L~~~l~~~ 437 (483)
.- | ..++.+|+.++- .+..++-.+++.|.+++++.
T Consensus 367 gD----~--R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 367 GD----F--REPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred cc----c--cCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 32 2 246789999964 48899999999999999876
No 377
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.70 E-value=7.6e-06 Score=89.62 Aligned_cols=273 Identities=15% Similarity=0.158 Sum_probs=157.5
Q ss_pred HHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc---CCCCeEEEeCCCCcChHHHHh---hhcCcEEEEeecCC
Q 011570 102 AVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA---DPGDAFLVPTPYYPGFDRDLR---WRTGVQLVPVVCDS 175 (483)
Q Consensus 102 ~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~---~~gd~Vlv~~P~y~~~~~~~~---~~~G~~~~~v~~~~ 175 (483)
.+...+.++.| .+..|.-+-.+++.+-..++.+.. +++++|++++-.|+.+...++ ...|.+++.++
T Consensus 113 e~Qt~i~eLtG----m~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--- 185 (939)
T TIGR00461 113 NFQTVVSDLTG----LPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--- 185 (939)
T ss_pred HHHHHHHHHHC----CChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc---
Confidence 33444445555 567788888888887776666632 234899999999998876655 22488888764
Q ss_pred CCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchH
Q 011570 176 SNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSI 255 (483)
Q Consensus 176 ~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~ 255 (483)
+++|++.+ ++.++++.+||. +|.+.+ +++|++.++++|.+++++---..+ .. ..+.
T Consensus 186 -------~~~l~~~~--------~~~~v~~q~Pn~-~G~ied---~~~i~~~~h~~gal~~~~ad~~al--~l---l~~P 241 (939)
T TIGR00461 186 -------CSDIKKAV--------DVFGCLLQYPAT-DGSILD---YKQLIDALHSHKSLVSVAADLMAL--TL---LTPP 241 (939)
T ss_pred -------HHHHhhcC--------CEEEEEEECCCC-CeEEec---HHHHHHHHHHcCCEEEEEechHHh--CC---cCCH
Confidence 33454432 456888889986 798864 889999999999999984322211 11 1111
Q ss_pred HHhhhhccccCCCeEEEEecCccccCC----CCceEEEEEecChHHHHHHHH-------------------------hhh
Q 011570 256 AEIIDQDIACNRNLIHIVYSLSKDMGF----PGFRVGIIYSYNDQVVSCARK-------------------------MSS 306 (483)
Q Consensus 256 ~~l~~~~~~~~~~~vi~~~S~SK~~g~----~GlRiG~li~~~~~l~~~~~~-------------------------~~~ 306 (483)
.+ .+-.|++++ +|.||+ .|--.|++.+. +.+.+.+.- ++.
T Consensus 242 ge---------~GaDi~vg~-~q~fg~p~g~GGP~aG~~a~~-~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrR 310 (939)
T TIGR00461 242 GH---------YGADIVLGS-SQRFGVPMGYGGPHAAFFAVK-DEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRR 310 (939)
T ss_pred HH---------cCCcEEeeC-CCccCCCCCCCCCceeeeeec-HhhHhhCCCCceeEEecCCCCccceeecccccccccc
Confidence 11 233344443 444443 34447777773 333322110 000
Q ss_pred cCCCCh--HHHHHHH---HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHH
Q 011570 307 FGLVSS--QTQHLIA---TMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEA 381 (483)
Q Consensus 307 ~~~~s~--~~q~~~~---~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~ 381 (483)
--..|. ..|...+ .++.. -+-.+-+++..++...+..++.+.|.+.|+++..+ .+|=.+.+.-. .. .
T Consensus 311 ekAtSNICt~qaL~a~~a~~Y~~-~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~--~fF~~~~v~~~--~~---~ 382 (939)
T TIGR00461 311 DKATSNICTAQVLLANVASSYCV-YHGPKGLKNIARRIHSLTSILANGLENDPHELINK--TWFDTLTVKVG--NG---I 382 (939)
T ss_pred cccCcchhHHHHHHHHHHHHHHH-HHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC--CccceEEEEeC--CC---C
Confidence 000111 1122111 11100 00022255666667778888999999999887654 34433333210 00 1
Q ss_pred HHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHH
Q 011570 382 EMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRIT 431 (483)
Q Consensus 382 ~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~ 431 (483)
..++.+++++ .||.++.. .++.+++|+.. .++++++.+++.+.
T Consensus 383 ~~~i~~~~~~-~gi~l~~~------~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 383 SSELLKAAEE-FNINLRAV------DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred HHHHHHHHHH-CCCeeeec------CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 2356666664 59987752 23579999976 58999999999885
No 378
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.60 E-value=1.5e-05 Score=78.31 Aligned_cols=299 Identities=14% Similarity=0.124 Sum_probs=154.2
Q ss_pred CCcEEEeCChh-HHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCC-CCcccCHHHHHHHHHHHH
Q 011570 119 PDRIVMSGGAT-GAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSS-NDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 119 ~~~i~it~G~~-~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~ 194 (483)
....++++.+| ..+.+++.++. ..++.|+.+.-.+..-..++... |.+++.++...+ +....|++.+++.+++.
T Consensus 74 ~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~A-Gl~~~vV~~~~~~d~l~td~~~ie~~i~~~- 151 (389)
T PF05889_consen 74 VKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERA-GLEPVVVENVLEGDELITDLEAIEAKIEEL- 151 (389)
T ss_dssp HCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHT-T-EEEEE-EEEETTEEEEHHHHHHHHHHHH-
T ss_pred ccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhc-CCeEEEeeccCCCCeeeccHHHHHHHHHHh-
Confidence 35567777766 44455555553 45788888876655445556665 999998885322 23455788888888653
Q ss_pred hcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEe
Q 011570 195 ESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVY 274 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~ 274 (483)
+....+.++++++---|... +++.+|+++|+++|+..|+..||+- .. . .-...+..... ...-.+++.
T Consensus 152 --G~~~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYgv---Q~-~--~~~~~i~~a~~--~GRvda~vq 219 (389)
T PF05889_consen 152 --GADNILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYGV---QS-S--KCMHLIQQAWR--VGRVDAFVQ 219 (389)
T ss_dssp --CGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTT---T--H--HHHHHHHHHHH--HSTCSEEEE
T ss_pred --CCCCeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchhh---hH-H--HHHHHHHHHHh--cCCcceeee
Confidence 44566778887754444432 3699999999999999999999972 22 1 11111111100 012235788
Q ss_pred cCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhc--CChhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 011570 275 SLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATML--SDDQFVEKFIAESAKRIAERHKAFTWGLSQ 352 (483)
Q Consensus 275 S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l--~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~ 352 (483)
|.-|.| +-+..-+.+.++++.....+...-+--...++..-....++ ....| ...+.++.+.+....+.+.+.-++
T Consensus 220 S~dkNF-~VPvGgai~As~~~~~i~~vs~~YpGRas~sp~ld~~itLl~LG~~g~-~~ll~~r~~~f~~l~erl~~~aee 297 (389)
T PF05889_consen 220 STDKNF-MVPVGGAIMASFDPSGILAVSKEYPGRASASPSLDLFITLLSLGCTGY-GALLKERKASFPYLKERLKKWAEE 297 (389)
T ss_dssp EHHHHH-CEESSHEEEEESSHHHHHHHHHTSHSHBTSHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCE-EecCCCcEEEecCHHHHHHHHHHhhhhhhcccchHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 55544456667666555554433222112223333333333 22232 333333333333333333333333
Q ss_pred CCceee-cCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeE----eeCCCCCCC---C--CCCEEEEEecc-CCHH
Q 011570 353 VGIGCL-KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLN----VSPGSSFHC---P--NPGWFRVCFAN-MDDR 421 (483)
Q Consensus 353 ~gi~~~-~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~----v~pg~~f~~---~--~~~~iRis~~~-~~~e 421 (483)
.|-.+. .|.....+.+.++....... .+...|...|. ..||. |.|+..+.- + ...|+=++-+. +++|
T Consensus 298 ~~e~ll~~p~N~is~a~tl~~l~~~~~-k~~~~lgs~Lf-~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~e 375 (389)
T PF05889_consen 298 VGERLLETPRNHISMAFTLDTLYEISQ-KDGTFLGSMLF-KRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTRE 375 (389)
T ss_dssp TTEEBSSSTT-SSEEEEE-TTCCTCCS-SHHHHHHHHHH-HTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HH
T ss_pred hhhhhcCCCCCCeeEEEECccchhhcc-chhhhHHHHHH-hCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCCHH
Confidence 443332 24444555666664322111 12234455555 45663 333322211 0 12577774433 7999
Q ss_pred HHHHHHHHHHHHHH
Q 011570 422 TMEIALSRITSFML 435 (483)
Q Consensus 422 ~l~~~l~~L~~~l~ 435 (483)
+++.++++|++.++
T Consensus 376 evd~~v~rL~k~i~ 389 (389)
T PF05889_consen 376 EVDYFVKRLDKIIK 389 (389)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999999875
No 379
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.58 E-value=3e-05 Score=75.73 Aligned_cols=316 Identities=14% Similarity=0.148 Sum_probs=174.6
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CC-----C-----CeEE-EeCCCCcChHHHHh
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DP-----G-----DAFL-VPTPYYPGFDRDLR 161 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~-----g-----d~Vl-v~~P~y~~~~~~~~ 161 (483)
+..-..+.+-..+....|+. ...|.|+--.|+...++.+.-+-- -| | +-|+ +.+-+|.++..++.
T Consensus 138 vF~lmE~~vl~km~~ivGw~--~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa 215 (510)
T KOG0629|consen 138 VFVLMEEEVLAKMREIVGWE--EGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAA 215 (510)
T ss_pred eEEeehHHHHHHHHHHhCCC--CCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHH
Confidence 33334444555555555532 235677777777777777654421 11 2 3343 44567777888777
Q ss_pred hhcC---cEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcCCCCHHHHHHHHHHHhhcCcEEEE
Q 011570 162 WRTG---VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNP-SNPLGTFLDRETLKDIVSFINEKNIHLVC 237 (483)
Q Consensus 162 ~~~G---~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~~~~~~~l~~i~~~a~~~~~~iI~ 237 (483)
.+ | -.++.|+.++.| ++++++||+.|.++.++|..+ .++-++. ..-.|..=+ +..|+++|++|++|+.+
T Consensus 216 ~l-g~gtd~c~~v~t~e~G--km~~~dLe~kile~k~kg~~P-f~vnaTaGTTV~GAFDd---L~~iadiC~k~~lWmHv 288 (510)
T KOG0629|consen 216 FL-GLGTDHCIKVKTDERG--KMIPDDLEKKILEAKAKGGVP-FFVNATAGTTVLGAFDD---LNGIADICEKHKLWMHV 288 (510)
T ss_pred Hh-ccCCceeEEecccccC--ccchHHHHHHHHHHHhcCCCC-eEEEecCCceeeeccCc---HHHHHHHHHhcCEEEEe
Confidence 76 7 678888888755 899999999999877665433 3333333 455677656 89999999999999999
Q ss_pred ccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh-h-------cCC
Q 011570 238 DEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS-S-------FGL 309 (483)
Q Consensus 238 Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~-~-------~~~ 309 (483)
|.+|++...-. ..+.......+ ..+ -+.++.+|.+| +.+.++..+...+-+....+.+. . ++.
T Consensus 289 DAAwGGglLmS-~k~R~kl~Gie------ra~-SvtwnpHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~Yd 359 (510)
T KOG0629|consen 289 DAAWGGGLLMS-RKHRHKLTGIE------RAN-SVTWNPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYD 359 (510)
T ss_pred ecccccccccC-hhhHhhccCcc------ccC-ceeecHHHhhc-CcchhhHHHHHHHHHHHhhcccchhhhhccCceee
Confidence 99998743333 22212111111 122 34678899998 77888776664443333221111 0 010
Q ss_pred CChHHHHHHHHhcCChh-------HH------HHHHHHHHHHHHHHHHHHHHhhhcCC-ce-ee--cCCceEEEeeecCc
Q 011570 310 VSSQTQHLIATMLSDDQ-------FV------EKFIAESAKRIAERHKAFTWGLSQVG-IG-CL--KSNAGLFLWMDLHH 372 (483)
Q Consensus 310 ~s~~~q~~~~~~l~~~~-------~~------~~~~~~~~~~l~~~~~~l~~~L~~~g-i~-~~--~~~~g~f~~~~l~~ 372 (483)
+|- -.....++.+. |+ .+-.++..+.+-+..+++.+.+++.+ .. +. .|+..++.+.-+|.
T Consensus 360 vS~---DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~ 436 (510)
T KOG0629|consen 360 VSY---DTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPP 436 (510)
T ss_pred ccc---ccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCch
Confidence 110 00011111110 00 01124455666778899999999883 22 22 24533344434444
Q ss_pred hhhccCh--HH-------HHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccC--CHHHHHHHHHHHHHH
Q 011570 373 LLKEQTY--EA-------EMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANM--DDRTMEIALSRITSF 433 (483)
Q Consensus 373 ~~~~~~~--~~-------~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~--~~e~l~~~l~~L~~~ 433 (483)
.+..... +. .-.+-..++++ |-....-+.. ...++++|+.++.. +.++++-+++-|..+
T Consensus 437 ~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~-Gt~Mi~YqPl-~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 437 SLRGWQENPERDSRLVKVAPKIKERMMKK-GTTMIGYQPL-GDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred HhccCcccchhhhHHHhhCcHHHHHHHhc-cceeeEeccc-ccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 3322111 00 11233445544 5443321111 12457999999763 778888888777654
No 380
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.57 E-value=1.6e-05 Score=80.00 Aligned_cols=279 Identities=19% Similarity=0.217 Sum_probs=138.9
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHH---hcCCCCeEEEeCCCCcChHHHHhhh---cCcEE
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFC---LADPGDAFLVPTPYYPGFDRDLRWR---TGVQL 168 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~---l~~~gd~Vlv~~P~y~~~~~~~~~~---~G~~~ 168 (483)
|.-+.--.+..++.+..| .+..|.-+-.|++.+-..++.+ --++.++|+++.-.|+.+...++-. .|.++
T Consensus 107 G~Lq~lfe~Qs~i~eLTG----mdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~i 182 (429)
T PF02347_consen 107 GRLQALFEYQSMICELTG----MDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEI 182 (429)
T ss_dssp HHHHHHHHHHHHHHHHHT----SSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEE
T ss_pred HHHHHHHHHHHHHHHhhC----CCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEE
Confidence 434444445555555555 3444555666666555544433 3344469999999999888765542 48999
Q ss_pred EEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCC
Q 011570 169 VPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTK 248 (483)
Q Consensus 169 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~ 248 (483)
+.++.++.+ ..| +.++.+|++.+||. .|.+-+ +++|.++++++|.++++ .+-- +....
T Consensus 183 v~~~~~~~~--~~d--------------~~~~a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~gal~~~-~ad~-~aL~~ 240 (429)
T PF02347_consen 183 VEVPLDEDG--TTD--------------DDDTAAVMVQNPNT-FGVFED---IKEIADIAHAAGALVIV-GADP-NALGG 240 (429)
T ss_dssp EEE-BBTTC--SB---------------STTEEEEEEESS-T-TSB--T---HHHHHHHHHHTT-EEEE-CGGC-CGCCT
T ss_pred EEecccccC--Ccc--------------ccCeEEEEeecCCC-CceEee---HHHHHHHHHHcCCEEEE-ecCH-HHHhC
Confidence 999987644 223 13889999999997 788866 88999999999988876 4321 11221
Q ss_pred CCCcchHHHhhhhccccCCCeEEEEecCccccCC----CCceEEEEEecChHHHHHHH----------------------
Q 011570 249 ESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF----PGFRVGIIYSYNDQVVSCAR---------------------- 302 (483)
Q Consensus 249 ~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~----~GlRiG~li~~~~~l~~~~~---------------------- 302 (483)
..+..+ .+-.|++++ +|.||. .|--.|++.+..+ +.+.+.
T Consensus 241 ---l~~Pge---------~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~-l~r~lPGRiVG~t~D~~G~~~~~ltLqt 306 (429)
T PF02347_consen 241 ---LKSPGE---------YGADIVVGE-HQTFGIPMGFGGPGAGFFAVRED-LVRQLPGRIVGQTKDADGKRAFVLTLQT 306 (429)
T ss_dssp ---C--GGG---------GT-SEEEEC-CTTTT---CCC-S--EEEEE-GG-GGGGS-S-EEEEEEBCCCSCCEEEE-GG
T ss_pred ---cCChhh---------cCccEEeeC-CCCCcccCCCCCCCeeeEEEhhh-hhhhCCCceecccccccccceeeecccc
Confidence 111111 233455655 676643 4555778877433 322211
Q ss_pred ------H--hhhcCCCChHHHHHHH--HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecC
Q 011570 303 ------K--MSSFGLVSSQTQHLIA--TMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLH 371 (483)
Q Consensus 303 ------~--~~~~~~~s~~~q~~~~--~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~ 371 (483)
+ ..+.. ++..+..++. ..+...+ .+-+++..++...+..++.+.|.+. ++.+..+.---|+....+
T Consensus 307 REQHIrReKAtSNI-ctnqaL~A~~a~~Yl~~~G--~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~ 383 (429)
T PF02347_consen 307 REQHIRREKATSNI-CTNQALLALAAAIYLAYLG--PEGLREIAERIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSK 383 (429)
T ss_dssp GTCHHHGCCSTT----SS-HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS
T ss_pred ccccccccchhhhh-hhhHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCC
Confidence 0 11111 2222222211 1121111 3346777778888999999999986 444433322223333322
Q ss_pred chhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHH
Q 011570 372 HLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRI 430 (483)
Q Consensus 372 ~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L 430 (483)
. ....++.++.+. .|+... ....+.+-+|+.- .++++++.+++.|
T Consensus 384 ~-------~~~~~l~~~~~~-~gl~~~------~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 384 D-------KEVEELLKRGIE-GGLNLR------YPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp --------HHHHHHHHTT-----EEEG------GG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred c-------HHHHHHHHHHHh-cCCCcc------ccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 1 111123443332 253332 1234578888876 4889999988764
No 381
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.56 E-value=5e-05 Score=72.79 Aligned_cols=285 Identities=15% Similarity=0.127 Sum_probs=162.3
Q ss_pred cCCC----cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC-----hHHHHhhhcCc----EEEEeecCCCCCcccCH
Q 011570 117 FDPD----RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPG-----FDRDLRWRTGV----QLVPVVCDSSNDFKVTM 183 (483)
Q Consensus 117 ~~~~----~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~-----~~~~~~~~~G~----~~~~v~~~~~~~~~~d~ 183 (483)
++|+ ||-.-+| +.|.+.+-++++.|+|+|+-.+--.++ |...-+..... +-.|+.+++. ..-+|.
T Consensus 101 ldp~kWGVNVQp~SG-SPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~-TG~IDY 178 (477)
T KOG2467|consen 101 LDPEKWGVNVQPYSG-SPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPS-TGYIDY 178 (477)
T ss_pred CCHHHCceeeccCCC-CchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCC-CCceeh
Confidence 5555 4555555 557788889999999999855432221 11111111011 1123334433 446899
Q ss_pred HHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHH-HHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhc
Q 011570 184 EALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRE-TLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQD 262 (483)
Q Consensus 184 ~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~-~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~ 262 (483)
+.||+....+ ++|+|+-. +..+++. +-.++.++|.+.|.+++.|-+|....... ...++..++
T Consensus 179 D~Le~~A~~f-----rPk~iiaG------~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA-~vipsPFey---- 242 (477)
T KOG2467|consen 179 DKLEKTATLF-----RPKLIIAG------TSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAA-GVIPSPFEY---- 242 (477)
T ss_pred HHHHHHHHhc-----CCcEEEec------cccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhc-ccCCCcccc----
Confidence 9999987775 77865532 2223322 35555666668899999999995433332 222232222
Q ss_pred cccCCCeEEEEecCccccCCCCceEEEEEecC----------hH----HHHHHHHhhhc---CCCChHHHHHHHHhcCCh
Q 011570 263 IACNRNLIHIVYSLSKDMGFPGFRVGIIYSYN----------DQ----VVSCARKMSSF---GLVSSQTQHLIATMLSDD 325 (483)
Q Consensus 263 ~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~----------~~----l~~~~~~~~~~---~~~s~~~q~~~~~~l~~~ 325 (483)
..||..|.+|++ .|-|-|.+.-.. ++ +.+.++..-.+ +.+..-...+++.+|..-
T Consensus 243 ------~DiVTTTTHKsL--RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa 314 (477)
T KOG2467|consen 243 ------CDIVTTTTHKSL--RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQA 314 (477)
T ss_pred ------cceeeccccccc--cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhh
Confidence 347788999976 899999887632 01 22222211111 223333444555455431
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCc-eEEEeeecCc-hhhccChHHHHHHHHHHHHhcCeEeeCCCCC
Q 011570 326 QFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNA-GLFLWMDLHH-LLKEQTYEAEMALWRVIINEVKLNVSPGSSF 403 (483)
Q Consensus 326 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~-g~f~~~~l~~-~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f 403 (483)
.. .+ ..+..+++.++...|.+.|.+.|.+...... +-.+.+++.. ++++ .-++.+++..+|.+.--..+
T Consensus 315 ~t-pe-fk~Yq~qV~~Nakala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dG-------arvE~vle~~~I~~NKNtvp 385 (477)
T KOG2467|consen 315 MT-PE-FKEYQKQVLKNAKALASALISRGYKLVTGGTDNHLVLVDLRPKGVDG-------ARVEKVLELCHIALNKNTVP 385 (477)
T ss_pred CC-HH-HHHHHHHHHHHHHHHHHHHHHcCceEecCCccceEEEEeccccCCch-------HHHHHHHHHhhhhhcCCcCC
Confidence 10 11 2445566778888999999999988764332 3466678854 3333 34556666667766544444
Q ss_pred CCC---CCCEEEEEecc-----CCHHHHHHHHHHHHHHHHH
Q 011570 404 HCP---NPGWFRVCFAN-----MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 404 ~~~---~~~~iRis~~~-----~~~e~l~~~l~~L~~~l~~ 436 (483)
+.. .++.+||+-.. ..++++++..+-|.++++-
T Consensus 386 GD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~i 426 (477)
T KOG2467|consen 386 GDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVKI 426 (477)
T ss_pred CCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHHH
Confidence 432 36779998743 2567888877777766543
No 382
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.56 E-value=5e-05 Score=75.00 Aligned_cols=319 Identities=13% Similarity=0.145 Sum_probs=175.7
Q ss_pred CCCcHHHHHHHHHHHHhhhCCCC-----Cc-CCCcEEEeCChhHHHHHHHHHh-------cCCC-----------C-eEE
Q 011570 93 YHGLPEFRNAVAKFMGKVRGNRI-----TF-DPDRIVMSGGATGAHETVAFCL-------ADPG-----------D-AFL 147 (483)
Q Consensus 93 ~~g~~~Lr~~ia~~~~~~~g~~~-----~~-~~~~i~it~G~~~al~~~~~~l-------~~~g-----------d-~Vl 147 (483)
.+..++|.-.+-+|+++..+.+- .. +.--|+-++. +++..+++.+. .+.+ + .+.
T Consensus 108 sPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~ta-ses~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y 186 (511)
T KOG0628|consen 108 SPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTA-SESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY 186 (511)
T ss_pred CcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCc-chhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence 34468999999999998876221 11 1223444443 44444443332 1112 1 455
Q ss_pred EeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHH
Q 011570 148 VPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSF 227 (483)
Q Consensus 148 v~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~ 227 (483)
+.+-++++....+.. +|+++..++.++ +|.++.+.|+++|.+..+.|- +..+++.+-. |-.+..-+++.+|..+
T Consensus 187 ~SDqahssveka~~i-~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGl-IPf~v~at~G--TT~~ca~D~l~elg~V 260 (511)
T KOG0628|consen 187 CSDQAHSSVEKACLI-AGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGL-IPFFVCATLG--TTSSCAFDELEELGPV 260 (511)
T ss_pred ecCcccchHHHhHhh-cceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCC-ccEEEEEeec--CccccccccHHHhcch
Confidence 677788888887665 499999999876 899999999999998766653 3334433332 2233466789999999
Q ss_pred HhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEe------------cCh
Q 011570 228 INEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYS------------YND 295 (483)
Q Consensus 228 a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~------------~~~ 295 (483)
|+++|+|+.+|.+|++..+.. +.+..+..-.+ .-+. +-.-.||.+ +.-.-+.-+.. .+-
T Consensus 261 c~~~glWLHVDAAYAGsa~iC-pE~r~l~rGie-----~aDS--fn~n~hK~~-~vnfDCs~lWvkd~~~~~~~~~vdp~ 331 (511)
T KOG0628|consen 261 CREEGLWLHVDAAYAGSAFIC-PEFRYLMRGIE-----YADS--FNFNPHKWL-LVNFDCSPLWVKDGTKLSRAFNVDPL 331 (511)
T ss_pred hhhcCEEEEeehhhccccccC-HHHHHHhhcch-----hhcc--ccCChhhee-EEeeeeecceeecCceeeeeeecChH
Confidence 999999999999999876665 44443332111 0011 112334543 22222221111 111
Q ss_pred HHHHHHH-Hhhhc--CCCC------hHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEE
Q 011570 296 QVVSCAR-KMSSF--GLVS------SQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLF 365 (483)
Q Consensus 296 ~l~~~~~-~~~~~--~~~s------~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f 365 (483)
.+..... ...++ |.++ ++-...+.+.+.-.. +++++++. .+..+.+.+.+.+- .+++..+.---.
T Consensus 332 yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~-lq~~iR~h----~~La~~fe~lv~~d~~FE~~~~~~lgL 406 (511)
T KOG0628|consen 332 YLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVEN-LQNYIREH----VRLAKEFETLVRADPRFEIVNKRILGL 406 (511)
T ss_pred hhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHH-HHHHHHHH----HHHHHHHHHHhhcCCcceeecccccce
Confidence 1211111 11111 2111 111112222222211 12222222 22222333333222 456554333225
Q ss_pred EeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc--CCHHHHHHHHHHHHHHHHHhhhc
Q 011570 366 LWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN--MDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~--~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
+.+++... . +....+..++-....|.+.|.+.= +.-.+|++++. +++++++++.+.|.+......++
T Consensus 407 vcFRlk~~---N--~~ne~Ll~~in~~g~i~l~~~~l~---gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~~ 475 (511)
T KOG0628|consen 407 VCFRLKGD---N--EINEALLNRLNSSGRIHLVPASLH---GKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFEA 475 (511)
T ss_pred eEEeecCC---c--HHHHHHHHHHHhcCcEEEEEeeec---ceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 55677642 1 223477888887778988887631 23369999976 48899999999999888776554
No 383
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.55 E-value=2.2e-05 Score=77.19 Aligned_cols=177 Identities=18% Similarity=0.170 Sum_probs=122.3
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEE-----EeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFL-----VPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEK 192 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vl-----v~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~ 192 (483)
.++.++++|..+.++..++.++..++..|+ ++ +..+.+.+.++.. |++++.+-... .-...+++.+|.+
T Consensus 82 ~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV~-gg~~~v~d~~~~a-G~~l~EvG~tn----~t~~~d~~~AIne 155 (395)
T COG1921 82 GAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELVE-GGAFRVPDIIRLA-GAKLVEVGTTN----RTHLKDYELAINE 155 (395)
T ss_pred chhheeeECCcHHHHHHHHhhhccCCeEEEEcccccc-CCCCChhHHHHHc-CCEEEEecccC----cCCHHHHHHHhcc
Confidence 478899999999999999999987665554 33 5777888888886 99999987543 2478889999975
Q ss_pred HHhcCCceeEEEEeCCCC-CCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEE
Q 011570 193 AQESNIRIKGVLITNPSN-PLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIH 271 (483)
Q Consensus 193 ~~~~~~~~~~i~l~~P~N-PtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi 271 (483)
++++++-++-+| +.=..++ +++++++|+++|+++++|.+-+..+-.. +.+..+.. ....+
T Consensus 156 ------~ta~llkV~s~~~~f~~~l~---~~~l~~ia~~~~lpvivD~aSg~~v~~e----~~l~~~la------~GaDL 216 (395)
T COG1921 156 ------NTALLLKVHSSNYGFTGMLS---EEELVEIAHEKGLPVIVDLASGALVDKE----PDLREALA------LGADL 216 (395)
T ss_pred ------CCeeEEEEeecccccccccc---HHHHHHHHHHcCCCEEEecCCccccccc----cchhHHHh------cCCCE
Confidence 777776665444 3222345 6677888889999999999987643222 23333322 24456
Q ss_pred EEecCccccCCCCceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhc
Q 011570 272 IVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATML 322 (483)
Q Consensus 272 ~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l 322 (483)
++.|-.|.+ .|.+.|.+++ .+++++.++.... ..-+..+..+++.++|
T Consensus 217 V~~SgdKll--gGPqaGii~G-kKelI~~lq~~~l~Ralrv~K~tla~l~~aL 266 (395)
T COG1921 217 VSFSGDKLL--GGPQAGIIVG-KKELIEKLQSHPLKRALRVDKETLAALEAAL 266 (395)
T ss_pred EEEecchhc--CCCccceEec-hHHHHHHHHhhhhhhhhhcCcHhHHHHHHHH
Confidence 778999987 5888999999 5666666544321 2345555555554444
No 384
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.50 E-value=8.7e-06 Score=75.85 Aligned_cols=175 Identities=22% Similarity=0.274 Sum_probs=115.4
Q ss_pred CCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeC-CCCcChHHHHhhh---------
Q 011570 94 HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPT-PYYPGFDRDLRWR--------- 163 (483)
Q Consensus 94 ~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~-P~y~~~~~~~~~~--------- 163 (483)
-|...|....|+-++.. ...-..-+.+ ++++|..++..+++|||+.+.-. --|....+.+...
T Consensus 65 ~GRdtLe~vyA~vf~aE------~a~VRpq~is-GTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~d 137 (416)
T COG4100 65 LGRDTLERVYAQVFGAE------AALVRPQIIS-GTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKD 137 (416)
T ss_pred cchhHHHHHHHHHhccc------cceeeeeeec-chhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHH
Confidence 46667777777766521 1112334444 58899999999999999977443 3355555443221
Q ss_pred cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcCCCCHHHHHHHHHHHhhc--CcEEEEccc
Q 011570 164 TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNP-SNPLGTFLDRETLKDIVSFINEK--NIHLVCDEI 240 (483)
Q Consensus 164 ~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~~~~~~~l~~i~~~a~~~--~~~iI~Dea 240 (483)
+|+....+|+..++ .+|.+.+..++.+ ++|+|-+.-- ..-.--.++.+++++++.+.++- ++++++|.+
T Consensus 138 fgi~Y~~v~Lt~~g--kiD~~~v~~~i~~------~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNC 209 (416)
T COG4100 138 FGIKYKAVPLTADG--KIDIQAVKTAISD------RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNC 209 (416)
T ss_pred hCcceeecccccCC--cccHHHHHHhcCc------cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 36778888887655 7999999999975 8998877632 22122237889999999998774 799999999
Q ss_pred cccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCce--EEEEEecChHHHH
Q 011570 241 YAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFR--VGIIYSYNDQVVS 299 (483)
Q Consensus 241 y~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlR--iG~li~~~~~l~~ 299 (483)
|++++-.. .+.. -...++.+|+-|.-| .|+- -||+.+. +.+.+
T Consensus 210 YGEFvE~~--EPt~------------vGaDliAGSLIKNpG-GgiaktGGYiaGk-~~~ve 254 (416)
T COG4100 210 YGEFVEEK--EPTH------------VGADLIAGSLIKNPG-GGIAKTGGYIAGK-AELVE 254 (416)
T ss_pred chhhhhcc--Cccc------------cchhhhccceeeCCC-Cceeeccceeech-HHHHH
Confidence 99864332 2111 133356788889876 5532 2588884 44443
No 385
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.48 E-value=5.8e-05 Score=74.71 Aligned_cols=326 Identities=12% Similarity=0.136 Sum_probs=190.3
Q ss_pred CCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh----cC-CC---CeEEEeCCCCcChHHHHhhhcC
Q 011570 94 HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL----AD-PG---DAFLVPTPYYPGFDRDLRWRTG 165 (483)
Q Consensus 94 ~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l----~~-~g---d~Vlv~~P~y~~~~~~~~~~~G 165 (483)
++...+..++-+++...++. + +.+-=..|.|+++++...-... .. .| ..++++...+..+....+. ++
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~--~-~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~y-f~ 191 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNA--P-SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARY-FE 191 (491)
T ss_pred chhHHHHHHHHHHHHHHhcC--C-ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhh-EE
Confidence 35567778887887777661 1 2234556889998854443332 11 22 3566777777777666665 49
Q ss_pred cEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhh-cCcEEEEccccccC
Q 011570 166 VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINE-KNIHLVCDEIYAAT 244 (483)
Q Consensus 166 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~-~~~~iI~Deay~~~ 244 (483)
+++..+|+++ ++|.+|+..+.+.+.+ ++..++..-|+-|+|.+=+ +++|.++..+ +++.|.+|.+-+.+
T Consensus 192 v~l~~V~~~~-~~~~~D~~k~~~~i~e------Nti~lv~~~~~~p~G~~e~---ve~l~~l~~e~w~ipiHvDa~~GgF 261 (491)
T KOG1383|consen 192 VELREVPLDE-GDYRVDPGKVVRMIDE------NTIMLVGSLPNFPTGEIED---VEKLADLLLEIWDIPIHVDACLGGF 261 (491)
T ss_pred EEEEeeeccc-cceEecHHHHHHHhcc------ceEEEEEEcCCCCccchhh---HHHHHHHHHHHhCCceeecccCccc
Confidence 9999999986 6899999999999875 8999999999999998755 7888888878 99999999999886
Q ss_pred ccC-CCCCcchHHHhhhhccccCCCeEEEE-ecCccccCCCCceEEEEEecChHHHHH-H----HH----hhhc-CCCC-
Q 011570 245 VFT-KESSFVSIAEIIDQDIACNRNLIHIV-YSLSKDMGFPGFRVGIIYSYNDQVVSC-A----RK----MSSF-GLVS- 311 (483)
Q Consensus 245 ~~~-~~~~~~s~~~l~~~~~~~~~~~vi~~-~S~SK~~g~~GlRiG~li~~~~~l~~~-~----~~----~~~~-~~~s- 311 (483)
+-. .... ..-.++ ....|-.+ .+-+| ||+.--..||++-.++.+... + .. ..++ ...|
T Consensus 262 i~p~~~~~-~~~fdF-------r~p~V~Sisa~~HK-YGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR 332 (491)
T KOG1383|consen 262 INPAGYLN-EEEFDF-------RVPGVTSISADGHK-YGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSR 332 (491)
T ss_pred cccccccC-cccccc-------CCCCceeEeeccce-eeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCC
Confidence 542 1011 001111 11222222 24455 444433478888755443221 1 00 0011 0111
Q ss_pred ----hHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecCchhhccChHHHHHHH
Q 011570 312 ----SQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALW 386 (483)
Q Consensus 312 ----~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~ 386 (483)
..+|.+..--+..++| .+..+.+.+....+.+.+++. ++.+....---|+...-.. .+..++.
T Consensus 333 ~g~~va~~wa~~~~lG~eGY-----~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~-------~~i~els 400 (491)
T KOG1383|consen 333 PGSQVAAQWAALMSLGEEGY-----RENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSND-------VNIFELS 400 (491)
T ss_pred cccHHHHHHHHHHHhhHHHH-----HHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCc-------cchhhhh
Confidence 1233333333444443 445566777888899999887 6665543221233221111 1122333
Q ss_pred HHHHHhcCeEeeCCCCCCCCCCCEEEEEecc--CCHHHHHHHHHHHHHHHHHhhhccCccchhhccccccceeccc
Q 011570 387 RVIINEVKLNVSPGSSFHCPNPGWFRVCFAN--MDDRTMEIALSRITSFMLKNVEAKVPNKKKLCWQRSLRLSMSS 460 (483)
Q Consensus 387 ~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~--~~~e~l~~~l~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (483)
. ++++.|-.+..-. | +..+-+++.. ..++--++++.-|++++++....+-++..+.+=+.-+-..+.+
T Consensus 401 d-~l~~~GW~lnalq-~----P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~p~~~~~~~~a~yg~a~~~~~ 470 (491)
T KOG1383|consen 401 D-LLRKKGWILNALQ-F----PAAIHICVTRVHAREDVADRFVADIRKVVEELKSLPESKTHGMAAIYGLAQKTPD 470 (491)
T ss_pred H-HHHhcCcCccccC-C----CCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhCCCcccCcccchhhhhhcCCc
Confidence 4 4556687665433 2 1123344422 2445568889999999999887776666665433333334433
No 386
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.30 E-value=4.8e-05 Score=72.59 Aligned_cols=217 Identities=13% Similarity=0.149 Sum_probs=120.8
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcC-CCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhh
Q 011570 182 TMEALEAAYEKAQESNIRIKGVLITNPSNPLGT-FLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIID 260 (483)
Q Consensus 182 d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~-~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~ 260 (483)
.++++|+.|.++..++..+.+|++.-.+.-.|. --|++..+++.+++++||+.+|+||+..+..-+ ..++.-....-
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaT--Gk~WaHehw~l 331 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGAT--GKFWAHEHWNL 331 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCcc--CceeeehhcCC
Confidence 578899999998777656666666544665555 458899999999999999999999999764222 23332221111
Q ss_pred hccccCCCeEEEEecCccccCCCCceEEEEEecChHHHH-HHHHhhhcCCCChHHHHHH---HHhcCChhHHHHHHHHHH
Q 011570 261 QDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVS-CARKMSSFGLVSSQTQHLI---ATMLSDDQFVEKFIAESA 336 (483)
Q Consensus 261 ~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~-~~~~~~~~~~~s~~~q~~~---~~~l~~~~~~~~~~~~~~ 336 (483)
..+..++ ||||-|- .| ||... .+..-. ..+.+.. |+..+.-...+ ...+.+.+. .
T Consensus 332 -----~~PpD~v--TFSKK~q-~g---Gffh~-~~frpn~pYrifNT-WmGdP~k~lll~~vv~~I~~~~L--------l 390 (484)
T KOG1405|consen 332 -----DSPPDVV--TFSKKFQ-TG---GFFHD-EEFRPNEPYRIFNT-WMGDPSKNLLLEEVVQEIKREDL--------L 390 (484)
T ss_pred -----CCCccce--ehhhhhh-cC---ccccC-cccCCCchHHHhhh-hcCChHHHHHHHHHHHHHhHHHH--------H
Confidence 2233333 8999984 65 66554 222111 1222222 32333222222 233333322 1
Q ss_pred HHHHHHHHHHHHhhhcC-----C-ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCE
Q 011570 337 KRIAERHKAFTWGLSQV-----G-IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGW 410 (483)
Q Consensus 337 ~~l~~~~~~l~~~L~~~-----g-i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~ 410 (483)
...+..-+.+.+.|.++ | +.-....| -|+-+++|.... ...+... ++-.||.+-. |+ ...
T Consensus 391 ~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrG-TF~a~d~ps~~~------Rdk~i~~-~~~nGv~~GG---Cg---~~s 456 (484)
T KOG1405|consen 391 NNVAHVGKALLKGLLELQAKYPGKINNLRGRG-TFIAWDCPSGSI------RDKLILI-ARLNGVNLGG---CG---DKS 456 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchhhhcccccc-eEEEEeCCChHH------HHHHHHH-HHHcCceecc---cc---cce
Confidence 22222334444444443 1 23334455 488888886421 1133333 4455876542 22 344
Q ss_pred EEEEecc-CCHHHHHHHHHHHHHHHH
Q 011570 411 FRVCFAN-MDDRTMEIALSRITSFML 435 (483)
Q Consensus 411 iRis~~~-~~~e~l~~~l~~L~~~l~ 435 (483)
+|+-.+. ..+...+-+++++.+.+.
T Consensus 457 iRfRPsLvf~~~Ha~i~l~~~~k~l~ 482 (484)
T KOG1405|consen 457 IRFRPSLVFRKHHADIFLDIFDKILA 482 (484)
T ss_pred eeeccceeehhhhHHHHHHHHHHHhc
Confidence 6666654 377788888999888775
No 387
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.25 E-value=0.0014 Score=64.65 Aligned_cols=271 Identities=19% Similarity=0.232 Sum_probs=151.4
Q ss_pred cCCCcEEEeCChhHHHHHHHHHh---cCCCCeEEEeCCCCcChHHHHhhh---cCcEEEEeecCCCCCcccCHHHHHHHH
Q 011570 117 FDPDRIVMSGGATGAHETVAFCL---ADPGDAFLVPTPYYPGFDRDLRWR---TGVQLVPVVCDSSNDFKVTMEALEAAY 190 (483)
Q Consensus 117 ~~~~~i~it~G~~~al~~~~~~l---~~~gd~Vlv~~P~y~~~~~~~~~~---~G~~~~~v~~~~~~~~~~d~~~l~~~i 190 (483)
.+-.|--+-.++|.+=..++.+. -.+..+|+++.-+|+.+.+.++-+ .|.+++.++.+ |++.|+++
T Consensus 135 m~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~- 206 (450)
T COG0403 135 LDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESA- 206 (450)
T ss_pred CCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhc-
Confidence 44556566667776656555554 233589999999999998887654 36777766644 56777766
Q ss_pred HHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEE-ccccccCccCCCCCcchHHHhhhhccccCCCe
Q 011570 191 EKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVC-DEIYAATVFTKESSFVSIAEIIDQDIACNRNL 269 (483)
Q Consensus 191 ~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~-Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~ 269 (483)
.+ ..+-++++.+|+. .|. ..+++.+|.+.++++|.++++ =|.-+...... + ...+-
T Consensus 207 ~~-----~~~~gv~vQyP~~-~G~--~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~p--P-------------Ge~GA 263 (450)
T COG0403 207 DD-----GDVFGVLVQYPNT-FGI--VEEDLRALIEAAHSAGALVIVAADPLALGLLKP--P-------------GEFGA 263 (450)
T ss_pred cc-----cCeEEEEEecCCC-CCc--cchhHHHHHHHHhhcCCEEEEEechhHhhccCC--c-------------cccCC
Confidence 32 3678899999984 663 334699999999999876654 22221111111 0 13355
Q ss_pred EEEEecCcc---ccCCCCceEEEEEecChHHHHHH----------------------------HHhh-hcCCCChHHHHH
Q 011570 270 IHIVYSLSK---DMGFPGFRVGIIYSYNDQVVSCA----------------------------RKMS-SFGLVSSQTQHL 317 (483)
Q Consensus 270 vi~~~S~SK---~~g~~GlRiG~li~~~~~l~~~~----------------------------~~~~-~~~~~s~~~q~~ 317 (483)
.|++++..- -+|..|-.+||..+..+ +.+.+ ++-+ ..+-++..+..+
T Consensus 264 DIvvG~~QrfGvPmgfGGPhag~fA~~~~-~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA 342 (450)
T COG0403 264 DIVVGSAQRFGVPMGFGGPHAGYFAVKDE-FKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLA 342 (450)
T ss_pred ceEEecCcccCCCcCCCCcceeeeeEhHh-HhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHH
Confidence 577766443 35666778888887433 22210 0000 011122222222
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC--CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCe
Q 011570 318 IATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV--GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKL 395 (483)
Q Consensus 318 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV 395 (483)
+++.+-.--+-.+-+++...+..+...++.+.|.+. |+++... .+|-.+.+.-.. .....+..+.. ..|+
T Consensus 343 ~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~--~fFdt~~v~~~~-----~~~~~l~~~~~-~~G~ 414 (450)
T COG0403 343 LAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD--HFFDTFTVRVPE-----EVAEALLAAAI-AGGI 414 (450)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc--cceeeEEEecch-----hHHHHHHHHHH-hcCC
Confidence 111110000002335667777788889999999965 5776644 455444332110 01113333333 3466
Q ss_pred EeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHH
Q 011570 396 NVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSF 433 (483)
Q Consensus 396 ~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~ 433 (483)
-++.- .+..+=+++.. .++++++.+++.+...
T Consensus 415 ~L~~~------~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 415 NLRRV------DADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred ceeee------cCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 65532 23356777755 4788899888887653
No 388
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=97.94 E-value=8.7e-06 Score=79.30 Aligned_cols=212 Identities=17% Similarity=0.205 Sum_probs=46.7
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCC---Cc---ChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPY---YP---GFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYE 191 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~---y~---~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~ 191 (483)
.++..+++|+...++.+++.++.. |.+|++..-. ++ .+.+.++.. |++++.|-... .-.+++++++|.
T Consensus 61 gAeaA~VvNnnaAAv~L~l~~la~-~~EvIvsRGelVeiGgsFRip~vm~~s-Ga~lvEVGttN----~t~~~Dye~AI~ 134 (367)
T PF03841_consen 61 GAEAALVVNNNAAAVLLALNTLAK-GKEVIVSRGELVEIGGSFRIPDVMRQS-GARLVEVGTTN----RTHLSDYEKAIT 134 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccc-ccccccccccccccccccccccccccc-ccccccccccc----cccccccccccc
Confidence 467788888888899998888764 5556654321 22 133556654 99998887543 246788999997
Q ss_pred HHHhcCCceeEEEEeCCCCCC--cCCCCHHHHHHHHHHHhhcCcEEEEccccccCc----cCCCCCcchHHHhhhhcccc
Q 011570 192 KAQESNIRIKGVLITNPSNPL--GTFLDRETLKDIVSFINEKNIHLVCDEIYAATV----FTKESSFVSIAEIIDQDIAC 265 (483)
Q Consensus 192 ~~~~~~~~~~~i~l~~P~NPt--G~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~----~~~~~~~~s~~~l~~~~~~~ 265 (483)
+ +|.+++..+++|-. |.. ..-.++++++++++|++++|+|-.-+.+. |.- +.-+++.....
T Consensus 135 e------~Ta~ll~Vh~Sn~~i~GFt-~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl-~~Ep~v~~~~~----- 201 (367)
T PF03841_consen 135 E------NTAALLKVHTSNFRIQGFT-GEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGL-PDEPTVQEYLA----- 201 (367)
T ss_dssp ---------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT-----------CCC-----
T ss_pred c------ccccccccccccccccccc-ccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccC-ccccHHHHHhh-----
Confidence 6 88899999998863 222 11238888999999999999998863321 111 11133443332
Q ss_pred CCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcC---C-hhH-----HHHHHHH
Q 011570 266 NRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLS---D-DQF-----VEKFIAE 334 (483)
Q Consensus 266 ~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~---~-~~~-----~~~~~~~ 334 (483)
..-.+++.|-.|.+| |-..|.+++ .+++++.+++.... .-+.-....++.+.|. + +.. ..+.+..
T Consensus 202 -~GaDlV~fSGdKlLG--GPQaGiI~G-kk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~ 277 (367)
T PF03841_consen 202 -AGADLVTFSGDKLLG--GPQAGIIVG-KKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQ 277 (367)
T ss_dssp -CT-SEEEEETTSSSS--S-S-EEEEE-EHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH-------------------
T ss_pred -cCCCEEEEECCCcCC--CCCeEEEEe-CHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhcccccccccccccc
Confidence 345677889999986 556899999 56677666543221 2355555554443332 1 110 0122344
Q ss_pred HHHHHHHHHHHHHHhhhc
Q 011570 335 SAKRIAERHKAFTWGLSQ 352 (483)
Q Consensus 335 ~~~~l~~~~~~l~~~L~~ 352 (483)
..+.++++.+.+...|..
T Consensus 278 ~~~~L~~rA~~l~~~l~~ 295 (367)
T PF03841_consen 278 SLEELRARAERLAAQLKA 295 (367)
T ss_dssp ------------------
T ss_pred cccccccccccccccccc
Confidence 445566666666665554
No 389
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.84 E-value=0.0051 Score=67.70 Aligned_cols=259 Identities=17% Similarity=0.151 Sum_probs=139.5
Q ss_pred CCCcEEEeCChh---HHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh---cCcEEEEeecCCCCCcccCHHHHHHHHH
Q 011570 118 DPDRIVMSGGAT---GAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR---TGVQLVPVVCDSSNDFKVTMEALEAAYE 191 (483)
Q Consensus 118 ~~~~i~it~G~~---~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~---~G~~~~~v~~~~~~~~~~d~~~l~~~i~ 191 (483)
+..|--+-.|++ ||+.++.+.--.+..+|+++.-.++.+...++-. .|.+++. +++++.+.
T Consensus 140 ~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~ 206 (954)
T PRK12566 140 DLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAA 206 (954)
T ss_pred hhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCC
Confidence 444444444555 4444443322222468999999999888766543 3666653 22333222
Q ss_pred HHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEE
Q 011570 192 KAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIH 271 (483)
Q Consensus 192 ~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi 271 (483)
.++-+|++.+||. .|.+-+ +++|++.++++|.++| +.+.- +...- - .+.. +.+-.|
T Consensus 207 ------~~~~~v~vq~P~~-~G~i~d---~~~i~~~~h~~gal~~-~~~d~-laL~l-l--~~Pg---------e~GADI 262 (954)
T PRK12566 207 ------HAVFGALLQYPDT-HGEIRD---LRPLIDQLHGQQALAC-VAADL-LSLLV-L--TPPG---------ELGADV 262 (954)
T ss_pred ------CCEEEEEEECCCC-ceEEcc---HHHHHHHHHHcCCEEE-EEeCH-HHHhC-C--CChh---------hcCCcE
Confidence 2678899999985 788844 8899999999988755 33221 11111 0 1111 234455
Q ss_pred EEe---cCccccCCCCceEEEEEecChHHHHHHH------------------------------HhhhcCCCChHHHHHH
Q 011570 272 IVY---SLSKDMGFPGFRVGIIYSYNDQVVSCAR------------------------------KMSSFGLVSSQTQHLI 318 (483)
Q Consensus 272 ~~~---S~SK~~g~~GlRiG~li~~~~~l~~~~~------------------------------~~~~~~~~s~~~q~~~ 318 (483)
+++ +|+=-+|..|--.||+.+. +.+.+.+. +.++ +-++..+..++
T Consensus 263 ~vG~~Q~fGvp~~~GGP~ag~~a~~-~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtS-NICT~qaL~A~ 340 (954)
T PRK12566 263 VLGSTQRFGVPMGYGGPHAAYFACR-DDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANS-NICTAQVLLAN 340 (954)
T ss_pred EeeCCCcCCCCCCCCCCCeeeeeeh-HHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccc-hhhHHHHHHHH
Confidence 565 3344455556668888884 33332210 0111 11121111111
Q ss_pred -HHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEe
Q 011570 319 -ATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNV 397 (483)
Q Consensus 319 -~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v 397 (483)
+.++..- +-.+-+++..++...+..++.+.|.+.|+++... .||=-+.+.-. . ...++..+.+ +.||-+
T Consensus 341 ~a~~Y~~~-~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~--~fF~~~~v~~~--~----~~~~~~~~a~-~~~~n~ 410 (954)
T PRK12566 341 IAGFYAVY-HGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLNR--HFFDTLTLEVG--G----AQAAIIESAE-AARINL 410 (954)
T ss_pred HHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHHHhcCCccccC--CccceEEEEcc--C----CHHHHHHHHH-HCCCee
Confidence 1111000 0012245556667778888999999888876533 45544444321 0 0224444444 458877
Q ss_pred eCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHH
Q 011570 398 SPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRIT 431 (483)
Q Consensus 398 ~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~ 431 (483)
+-- +++.+.||+.. .+.++++.++..+.
T Consensus 411 r~~------~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 411 RIL------GRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred EEe------CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 632 24578899966 48888888888774
No 390
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.62 E-value=0.03 Score=58.01 Aligned_cols=316 Identities=19% Similarity=0.225 Sum_probs=172.5
Q ss_pred cccccCCCC---CCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChh---HHHHHHHHHhcCCCC----eEEEeCCCCc
Q 011570 85 KGIAIFQDY---HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGAT---GAHETVAFCLADPGD----AFLVPTPYYP 154 (483)
Q Consensus 85 ~~~~~Y~~~---~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~---~al~~~~~~l~~~gd----~Vlv~~P~y~ 154 (483)
..++.|.|. +|+.++-..+.+++-...| .+.-.+-..+|++ .++..+-..+..+|+ ..++|.-.++
T Consensus 566 anIHPF~P~eQaqGY~~lf~~Le~~Lc~iTG----~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHG 641 (1001)
T KOG2040|consen 566 ANIHPFAPVEQAQGYQQLFTELEKDLCEITG----FDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHG 641 (1001)
T ss_pred ccCCCCCchHHHhhHHHHHHHHHHHhheeec----ccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccC
Confidence 344555443 5788888888888876555 2222333344443 344444444444553 4566777777
Q ss_pred ChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcE
Q 011570 155 GFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIH 234 (483)
Q Consensus 155 ~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~ 234 (483)
.--..+... |.++++|..+..+ .+|..+|.+..+++. .+-.++.++.|+. -|.. ++.+..++++.++||.-
T Consensus 642 TNPASA~Ma-gmkvvpV~~~~~G--~id~~dLk~kaekh~---~~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehGGQ 712 (1001)
T KOG2040|consen 642 TNPASAAMA-GMKVVPVGCDANG--NIDMVDLKAKAEKHK---DNLAALMVTYPST-HGVF--EEGIDDICDIIHEHGGQ 712 (1001)
T ss_pred CChhhHHhc-CCEEEEeeccCCC--CccHHHHHHHHHHhh---hhhheeEEecccc-cccc--cccHHHHHHHHHhcCCE
Confidence 766666664 9999999988655 799999999877653 2566888898875 2433 34589999999999999
Q ss_pred EEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC----CceEEEEEecChHHHHHHHH-------
Q 011570 235 LVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP----GFRVGIIYSYNDQVVSCARK------- 303 (483)
Q Consensus 235 iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~----GlRiG~li~~~~~l~~~~~~------- 303 (483)
|..|.+-..-..+ +.+-. +....+.---++|+|..| |-.+|=+-. ++-+...+..
T Consensus 713 VYlDGANMNAqVG-------lc~pG------d~GaDV~HLNLHKTFcIPHGGGGPg~gPIgV-K~HLapfLP~HpVvs~~ 778 (1001)
T KOG2040|consen 713 VYLDGANMNAQVG-------LCRPG------DIGADVCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSPG 778 (1001)
T ss_pred EEecCCCccceec-------ccCCc------cccccceeecccceeeecCCCCCCCCCccch-hhhccccCCCCCccCCC
Confidence 9999986432111 11000 111112222456666432 222333322 2222211110
Q ss_pred ----hhhcCCCCh---------HHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCc---eEEE
Q 011570 304 ----MSSFGLVSS---------QTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNA---GLFL 366 (483)
Q Consensus 304 ----~~~~~~~s~---------~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~---g~f~ 366 (483)
..+.+.+++ +...+-.++....+. +..-+.-.-+.++|.+.|+.+ .+-+....+ .=|
T Consensus 779 ~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL-----~~as~~AiLNaNYMakRLe~hYkil~~~~~~~vaHEF- 852 (1001)
T KOG2040|consen 779 RPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGL-----KDASKIAILNANYMAKRLESHYKILFRGENGLVAHEF- 852 (1001)
T ss_pred CCCCCCCccceeccCCCcceeehhHHHHHHHhccccc-----chhhHHHhhhhHHHHHHHhhccceeEecCCcceeeee-
Confidence 001111111 122233344444332 121222234557888888876 333333222 113
Q ss_pred eeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 367 WMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 367 ~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
.+++..+.+...++ ..+++++|. .+|..--..++. -.+.+-|-... .+.+++++++++|-.+-++.+
T Consensus 853 IlD~r~fK~~agie-avDvAKRL~-DYgFHaPTmswP---V~gtLMIEPTESE~k~ElDRfcdAliSIreEI~ 920 (1001)
T KOG2040|consen 853 ILDLRPFKKTAGIE-AVDVAKRLM-DYGFHAPTMSWP---VAGTLMIEPTESEDKAELDRFCDALISIREEIA 920 (1001)
T ss_pred eeechhhccccCCc-HHHHHHHHH-hccCCCCccccc---cCCceEeccCccccHHHHHHHHHHHHHHHHHHH
Confidence 25666554444333 348889888 568764333332 35566665543 366788888888876555544
No 391
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.31 E-value=0.015 Score=53.75 Aligned_cols=301 Identities=15% Similarity=0.169 Sum_probs=143.0
Q ss_pred CCCcEEEeCChhHHHHHHHHHhc--CCCC-eEEEeCC-CCcChHHHHhhhcCcEEEEee-cCCCCCcccCHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLA--DPGD-AFLVPTP-YYPGFDRDLRWRTGVQLVPVV-CDSSNDFKVTMEALEAAYEK 192 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~--~~gd-~Vlv~~P-~y~~~~~~~~~~~G~~~~~v~-~~~~~~~~~d~~~l~~~i~~ 192 (483)
-+..+++---+...+.+.+..+. +|.. .|+-+.- .-+.+.. +-. +|.+.+-+. +.+.+...-|++.+++.+++
T Consensus 75 v~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ks-i~~-agfepiiie~i~d~d~l~tdleav~~~iee 152 (432)
T KOG3843|consen 75 VANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKS-IIH-AGFEPIIIENILDGDELITDLEAVEAIIEE 152 (432)
T ss_pred hhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHH-HHh-cCCCceeeeccccchHHHHhHHHHHHHHHH
Confidence 34455544333344566666663 3433 3332222 2222322 222 387766554 33333445588888888876
Q ss_pred HHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCC-eEE
Q 011570 193 AQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRN-LIH 271 (483)
Q Consensus 193 ~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~-~vi 271 (483)
. |+..-+.+.+.-+ .=..-+++.+++|+.+|..|+++-|+..+|+. .. . ..+..+.... ..+ ..-
T Consensus 153 ~---g~dcilci~stts--cfapr~pd~leaiaaica~~diphivnnaygl---qs-e--e~i~~iaa~~---~~grida 218 (432)
T KOG3843|consen 153 L---GEDCILCIHSTTS--CFAPRSPDNLEAIAAICAAHDIPHIVNNAYGL---QS-E--ECIHKIAAAA---ECGRIDA 218 (432)
T ss_pred h---CCceEEEEeeccc--ccCCCCCchHHHHHHHHHccCchhhhcccccc---ch-H--HHHHHHHHHh---hhccHHH
Confidence 4 3333222222111 11122567899999999999999999999973 32 1 2233222210 112 234
Q ss_pred EEecCccccCCCCceEE-EEEe-cChHHHHHHHHhhhcCCCChHHHHHHHHhc--CChhHHHHHHHHHHHHHHHHHHHHH
Q 011570 272 IVYSLSKDMGFPGFRVG-IIYS-YNDQVVSCARKMSSFGLVSSQTQHLIATML--SDDQFVEKFIAESAKRIAERHKAFT 347 (483)
Q Consensus 272 ~~~S~SK~~g~~GlRiG-~li~-~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l--~~~~~~~~~~~~~~~~l~~~~~~l~ 347 (483)
++.|+-|.|-.| +| .+++ -++..++.+.++.+--..++++.-.+..+| ....+ .+...+..+.+...+..+.
T Consensus 219 ~vqsldknf~vp---vggaiia~fk~n~iq~iak~ypgrasa~ps~dllitll~~gqn~f-~e~~~eqkemf~~l~~ki~ 294 (432)
T KOG3843|consen 219 FVQSLDKNFMVP---VGGAIIAAFKDNFIQEIAKMYPGRASASPSLDLLITLLSLGQNAF-KELFGEQKEMFLKLRNKII 294 (432)
T ss_pred HHHHhhhcceee---cchhHhhHhHHHHHHHHHHhCCCccccCccHHHHHHHHHhchhHH-HHHHHHHHHHHHHHHHHHH
Confidence 568999998544 34 3333 234444444444333223334444444443 33333 3333444444444444444
Q ss_pred HhhhcCCcee-ecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCe---EeeCCCCC------------CCC----C
Q 011570 348 WGLSQVGIGC-LKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKL---NVSPGSSF------------HCP----N 407 (483)
Q Consensus 348 ~~L~~~gi~~-~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV---~v~pg~~f------------~~~----~ 407 (483)
+.-+.+|-.+ ..|+.-..+.+.+......+ ..+-..|-..|+. .|| .|.|.... +.- .
T Consensus 295 ~~ae~~~e~l~~~p~n~is~amtl~ti~~~k-~kavt~~gsilfa-k~isgarvv~~~q~kttieg~ef~~f~sht~e~~ 372 (432)
T KOG3843|consen 295 KFAEAIGECLLETPENEISLAMTLKTIDEAK-DKAVTLFGSILFA-KGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQH 372 (432)
T ss_pred HHHHHhhhhhhcCCCchhhhhhhhccCChHH-hhHHHHHHHHHHh-ccccCceEeeccccceeeeceEEeccccccCcCc
Confidence 4444344222 23443333333333211111 1111123333333 354 34443221 100 0
Q ss_pred CCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhhc
Q 011570 408 PGWFRVCFAN-MDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 408 ~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
.+|+-+..+- ++..++++++.||...+.+.++|
T Consensus 373 ~~yln~a~aigm~~hdld~~~~rl~~~~a~~~ke 406 (432)
T KOG3843|consen 373 CAYLNAACAIGMKDHDLDEFFNRLDRCLAAFRKE 406 (432)
T ss_pred hhHhhHHHhcCCcHhHHHHHHHHHHHHHHHHHHH
Confidence 1233333221 57789999999999888776655
No 392
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.25 E-value=0.07 Score=52.03 Aligned_cols=329 Identities=14% Similarity=0.103 Sum_probs=161.0
Q ss_pred cccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCC
Q 011570 48 VIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGG 127 (483)
Q Consensus 48 ~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G 127 (483)
+.+|+.+...+++..++++-..... +...++.-...-++ ..-...+-+...+.+.+.++ +|-+-+=+++-.|
T Consensus 6 ~~nFsaGPa~lp~~vL~~a~~e~~~---~~g~g~svme~SHR---sk~~~~v~~~a~~~lreLl~--iPd~Y~VlflqGG 77 (365)
T COG1932 6 VYNFSAGPAALPPEVLQQAQKELLD---WNGLGMSVMEISHR---SKEFKNVLEEAEKDLRELLN--IPDDYKVLFLQGG 77 (365)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHhh---hccCCcceeeeccc---cHHHHHHHHHHHHHHHHHhC--CCCCceEEEEcCc
Confidence 4688888766776665554433211 00011111111111 11124444444455555555 4322233444566
Q ss_pred hhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH-HhhhcCc--EEEEeecCCCCCc--ccCHHHHHHHHHHHHhcCCceeE
Q 011570 128 ATGAHETVAFCLADPGDAFLVPTPYYPGFDRD-LRWRTGV--QLVPVVCDSSNDF--KVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 128 ~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~-~~~~~G~--~~~~v~~~~~~~~--~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
++....++...|+.+...-.+..-.|...... ++.. +. ++.... ....+| -++++... +. .+..-
T Consensus 78 at~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~-~~~~~~~~~~-~~~~~~~~iP~~~~~~--~~------~~~ay 147 (365)
T COG1932 78 ATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKV-GKQPKLIDAR-IEEAGYGSIPDLSKWD--FS------DNDAY 147 (365)
T ss_pred cHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHh-cccccccccc-eeccCccCCCChhhcc--cC------CCccE
Confidence 77888888888876654312333334332221 2222 43 222211 112222 23333332 11 12233
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
|.+|.-..-+|.-++. ...+. .+.++|+|-.-.- +.. + .++..+ .++-.|.-|.+|-
T Consensus 148 v~~~~NeTi~Gv~v~~--~p~~~-----~~~~~v~D~SS~i--lsr--~-iDvsk~-----------dviyagaQKnlGp 204 (365)
T COG1932 148 VHFCWNETISGVEVPE--LPDIG-----SDGLLVADASSAI--LSR--P-IDVSKY-----------DVIYAGAQKNLGP 204 (365)
T ss_pred EEEecCCcccceEccC--CCCCC-----CCceEEEecccHH--hcC--C-CChhHc-----------ceEEEehhhccCc
Confidence 6666444466776661 11111 1267888877543 332 1 343333 2445799999998
Q ss_pred CCceEEEEEecChHHHHHHHHh---------------hhcCCCChHHHHHHHHh----cCChhHHHHHHHHHHHHHHHHH
Q 011570 283 PGFRVGIIYSYNDQVVSCARKM---------------SSFGLVSSQTQHLIATM----LSDDQFVEKFIAESAKRIAERH 343 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~---------------~~~~~~s~~~q~~~~~~----l~~~~~~~~~~~~~~~~l~~~~ 343 (483)
.| ++.++..++.+.+ .+.. +.+++++.++.+..... ...++ ++...++-.+..
T Consensus 205 aG--ltvvIvr~~~l~r-~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GG-----l~~~~~rn~~ka 276 (365)
T COG1932 205 AG--LTVVIVRPDLLER-AESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGG-----LEALEARNQAKA 276 (365)
T ss_pred cc--eEEEEEcHHHHhc-ccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCC-----HHHHHHHHHHHH
Confidence 88 8888885554433 3221 11222333333322221 22222 233344445666
Q ss_pred HHHHHhhhcCCce---e-ecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-C
Q 011570 344 KAFTWGLSQVGIG---C-LKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-M 418 (483)
Q Consensus 344 ~~l~~~L~~~gi~---~-~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~ 418 (483)
+.|.+.+.+.++- + .....-+-+.+++... +-+..|...+. ++|+...-|. ...+.+|+++.. +
T Consensus 277 ~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~~------~ld~~fv~eae-~~gl~~lkGh----r~vgGmRasiynA~ 345 (365)
T COG1932 277 QLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVDA------ELDKGFVAEAE-AAGLIYLKGH----RSVGGLRASIYNAV 345 (365)
T ss_pred HHHHHHHHhCCccccccchhhccceeEEEEcCcH------HHHHHHHHHHH-HcCCceeccc----cCCCceeeeeecCC
Confidence 7777777665431 1 1234456677777631 11224555544 5587776663 233449999966 5
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 011570 419 DDRTMEIALSRITSFMLK 436 (483)
Q Consensus 419 ~~e~l~~~l~~L~~~l~~ 436 (483)
+.++++.+++-++.+.++
T Consensus 346 ~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 346 PLEDVEALTDFMDWFEET 363 (365)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 888888888888776654
No 393
>PLN02672 methionine S-methyltransferase
Probab=96.90 E-value=0.06 Score=60.73 Aligned_cols=205 Identities=15% Similarity=0.138 Sum_probs=129.0
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh------cCCCCeEEEeCCCCcChHHHH
Q 011570 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL------ADPGDAFLVPTPYYPGFDRDL 160 (483)
Q Consensus 87 ~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l------~~~gd~Vlv~~P~y~~~~~~~ 160 (483)
...|.++.|...+|..||.|+..+++ +++++++|++.+.-..++..+++.+ ++.+.+-.++ ..+...+
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 492 (1082)
T PLN02672 419 YFPCEPPAGSKRFRNLIAGFMRIYHH--IPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP----KKWLTSL 492 (1082)
T ss_pred CCCCCCCccchHHHHHHHHHHHHhcC--CcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC----HHHHhHh
Confidence 45688889999999999999999988 8899999999999999998887665 2333221111 1222222
Q ss_pred hhh-------c--CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc
Q 011570 161 RWR-------T--GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK 231 (483)
Q Consensus 161 ~~~-------~--G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~ 231 (483)
... . .+.++..|.. -+.+.+.|+.. ++++|+..-.. +-..+...++.|++.+++-
T Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 556 (1082)
T PLN02672 493 AIENATSDSKSDDVITVIEAPRQ--------SDLVIELIKKL-----KPQVVVTGMAD---FEMRTSTAFEHLLNVTAEI 556 (1082)
T ss_pred hhhcccccCccCCeEEEEeCCCc--------chHHHHHHHhC-----CCeEEEEeccc---hhhhhHHHHHHHHHHHHhh
Confidence 221 0 1233333321 12455566553 67766644332 3334666789999999999
Q ss_pred CcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh--cCC
Q 011570 232 NIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS--FGL 309 (483)
Q Consensus 232 ~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~--~~~ 309 (483)
|++++.|..-.. .....+....+..+..+-+ -+.+..++.++-|.-=.+.|-+.+++.-++.+...+.+... .+.
T Consensus 557 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (1082)
T PLN02672 557 GARLFLDISDHL-ELSSLPGSNGVLKYLAGHP--LPSHAAIICGLVKNQVYSDLEVAFVISENEAVLKALSKTGEVLEGR 633 (1082)
T ss_pred CcEEEEehhhhe-eeccCCCcccHHHHhcCCC--CCcchhHhhhhhhccccccceEEEEecCcHHHHHHHHHHHHhhccc
Confidence 999999997431 1232133344555443211 23556667888887445999999999977777666654322 244
Q ss_pred CChHHHH
Q 011570 310 VSSQTQH 316 (483)
Q Consensus 310 ~s~~~q~ 316 (483)
.+.++|.
T Consensus 634 ~~~~~~~ 640 (1082)
T PLN02672 634 TAIISQF 640 (1082)
T ss_pred hHHHHHH
Confidence 5555554
No 394
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=96.44 E-value=0.32 Score=46.24 Aligned_cols=155 Identities=12% Similarity=0.144 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCC---CeEEEeCCCCcC----hHHHHhhhcCcEE-
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPG---DAFLVPTPYYPG----FDRDLRWRTGVQL- 168 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~g---d~Vlv~~P~y~~----~~~~~~~~~G~~~- 168 (483)
......++...+ ...++|.+.|.-+-.+..++.+|.+|- -+|+.+.-.|++ +...++.. |..+
T Consensus 114 e~il~l~~~iVG--------A~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lh-G~~~e 184 (465)
T KOG3846|consen 114 EPILPLLAPIVG--------AQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLH-GISPE 184 (465)
T ss_pred hhhhhhhhhhcc--------CCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhc-CCChH
Confidence 445555555554 467789999999999999999998775 468888777654 33445554 6553
Q ss_pred ---EEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc
Q 011570 169 ---VPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV 245 (483)
Q Consensus 169 ---~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~ 245 (483)
+.+... +|.-.+..+++.+.|+. ++....+|+++..+.-||+.++ +.+|-..-+..|++|=.|=+++
T Consensus 185 ~sm~~iePR-EGEetlRteDILd~IEk---ngDeiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHA--- 254 (465)
T KOG3846|consen 185 NSMIQIEPR-EGEETLRTEDILDTIEK---NGDEIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHA--- 254 (465)
T ss_pred HheEEeccc-ccccchhHHHHHHHHHh---cCCeEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhh---
Confidence 222222 34445777888777765 3446777788888999999999 7777766677799999999987
Q ss_pred cCCCCCcchHHHhhhhccccCCCeEEEEecCccccC
Q 011570 246 FTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG 281 (483)
Q Consensus 246 ~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g 281 (483)
++. -+. -+. +++..+-++.--|...
T Consensus 255 vgN-VpL-~LH---------dWgVDFACWCSYKYln 279 (465)
T KOG3846|consen 255 VGN-VPL-QLH---------DWGVDFACWCSYKYLN 279 (465)
T ss_pred hcC-Cce-EEe---------ecCCceEEEeeecccc
Confidence 454 221 111 3466666777677653
No 395
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=92.32 E-value=11 Score=35.98 Aligned_cols=334 Identities=15% Similarity=0.131 Sum_probs=159.6
Q ss_pred CCCcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 45 PNGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
|..+++|+.+.-.+|.+.+.++...... +...++.-..-.++ +.....+.+.--..+.+++. ++-+-+-+++
T Consensus 5 ~~~vvnFaaGPAklp~~VL~e~qkdl~n---~~g~GisV~EmSHR---sk~f~kii~~tes~lreLln--iPdn~~vlf~ 76 (370)
T KOG2790|consen 5 PERVVNFAAGPAKLPESVLLEAQKDLLN---FNGSGISVMEMSHR---SKDFAKIINDTESLLRELLN--IPDNYKVLFL 76 (370)
T ss_pred ccceeecCCCcccCCHHHHHHHHHHhhc---cCCCcceEEEeccc---chhHHHHHHHHHHHHHHHHc--CCCceeEEEE
Confidence 4567899988777776666655443211 11111111111111 11123333333344444443 3322233555
Q ss_pred eCChhHHHHHHHHHhc--CCC---CeEEEeCCCCcChHHHHhhhcCcE-EEEeecCCCC-CcccCHHHHHHHHHHHHhcC
Q 011570 125 SGGATGAHETVAFCLA--DPG---DAFLVPTPYYPGFDRDLRWRTGVQ-LVPVVCDSSN-DFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 125 t~G~~~al~~~~~~l~--~~g---d~Vlv~~P~y~~~~~~~~~~~G~~-~~~v~~~~~~-~~~~d~~~l~~~i~~~~~~~ 197 (483)
-.|++.....+...|+ +.| |.|++-..+--.+.++-+ + |.. .+..++.+.. +--+|.+.++. +
T Consensus 77 QGGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk-~-~~~~~V~~~~k~y~ygkvPd~~~w~~--------~ 146 (370)
T KOG2790|consen 77 QGGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKK-Y-GTPNIVIPKLKSYTYGKVPDPSTWEL--------N 146 (370)
T ss_pred eCCCcccccccchhhhccccCCccceEEeccccHHHHHHHHh-h-CCceEEeccccccccCcCCChhhccc--------C
Confidence 5667766666665565 333 677777666555555433 3 433 3433332211 11234444432 2
Q ss_pred CceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCc
Q 011570 198 IRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLS 277 (483)
Q Consensus 198 ~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~S 277 (483)
++.+.|++|.--.--|.-++.-- .-.-+|.++|.|-.-. |-. .+ .++.. -.+++.+.-
T Consensus 147 ~da~yvyyCaNETVHGVEf~~~P------~~~~~~~vlVaDmSSn---flS-rp-vDvsk-----------~gvi~aGAQ 204 (370)
T KOG2790|consen 147 PDASYVYYCANETVHGVEFDFIP------VNDPKGAVLVADMSSN---FLS-RP-VDVSK-----------FGVIFAGAQ 204 (370)
T ss_pred CCccEEEEecCceeeceecCCCC------CCCCCCceEEEecccc---hhc-CC-ccchh-----------cceEEeccc
Confidence 35567777744333355443110 1134677888887753 333 22 33222 235578899
Q ss_pred cccCCCCceEEEEEecChHHHHHHHH-------------hhhcCCCChHHHH----HHHHhcCChhHHHHHHHHHHHHHH
Q 011570 278 KDMGFPGFRVGIIYSYNDQVVSCARK-------------MSSFGLVSSQTQH----LIATMLSDDQFVEKFIAESAKRIA 340 (483)
Q Consensus 278 K~~g~~GlRiG~li~~~~~l~~~~~~-------------~~~~~~~s~~~q~----~~~~~l~~~~~~~~~~~~~~~~l~ 340 (483)
|.+|.+|+ -.++..++.+...... .+.+++.+.+..+ ....+++.++. +...+.-.
T Consensus 205 KN~G~aG~--Tvvivr~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl-----~a~e~~n~ 277 (370)
T KOG2790|consen 205 KNVGPAGV--TVVIVRKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGL-----AAMEKLNQ 277 (370)
T ss_pred cccCcccc--EEEEEehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccH-----HHHHHHHH
Confidence 99998885 3344433333222111 0111222222222 23344444442 23333334
Q ss_pred HHHHHHHHhhhcC-Cceeec----CCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEe
Q 011570 341 ERHKAFTWGLSQV-GIGCLK----SNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCF 415 (483)
Q Consensus 341 ~~~~~l~~~L~~~-gi~~~~----~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~ 415 (483)
+....+.+.+.+. |+-..+ ...-|-+.+++.+ + +-+.+|.....++ +..-.-|. ..-|.+|-|+
T Consensus 278 ~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri~~----d--~Le~eFLkeA~~~-~mv~LKGh----RSVGGiRASl 346 (370)
T KOG2790|consen 278 EKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRIEK----D--ELEAEFLKEAAKE-HMVQLKGH----RSVGGIRASL 346 (370)
T ss_pred HHHHHHHHHHHhcCCeEEcccchhhhhhcccceeecc----h--HHHHHHHHHHHHh-hhhccccc----cccccchhhh
Confidence 5557778888765 532211 1222444444442 1 2233666666655 33322332 2235699999
Q ss_pred cc-CCHHHHHHHHHHHHHHHHH
Q 011570 416 AN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 416 ~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
=+ ++-++.+.+++-++++.+.
T Consensus 347 YNAisv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 347 YNAISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred hccccHHHHHHHHHHHHHHHHh
Confidence 44 5778877777777766554
No 396
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=86.79 E-value=48 Score=35.45 Aligned_cols=250 Identities=16% Similarity=0.186 Sum_probs=123.5
Q ss_pred hhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhc---CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 128 ATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRT---GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 128 ~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~---G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
+.|++.++.+ ..++.++++...+|+.....++-.. |++++.. |++..... ..++..|+
T Consensus 192 aaEAm~l~~~--~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~----------~~~~~~~s-------~~~v~gvl 252 (1001)
T KOG2040|consen 192 AAEAMALCNR--INKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS----------DIKEADYS-------SKDVSGVL 252 (1001)
T ss_pred HHHHHHHHHh--hcccceEEecCCCCcchhhhhhccccccceeEEec----------CHHHhhcc-------ccceeEEE
Confidence 3445444433 3466679999999998887776431 3332221 22222111 23677888
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC-
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP- 283 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~- 283 (483)
+.-|.. -|.+.+ ..++++.++.++.++++---...+..-. + .. .+...|.++| |--||+|
T Consensus 253 vQYP~t-~G~i~d---~~el~~~a~~~~s~vv~atDLLaLtiLr-p----Pg---------efGaDIavGS-sQRFGVPl 313 (1001)
T KOG2040|consen 253 VQYPDT-EGSVLD---FDELVELAHANGSLVVMATDLLALTILR-P----PG---------EFGADIAVGS-SQRFGVPL 313 (1001)
T ss_pred EEcCCC-CCcccC---HHHHHHHhhccCceEEEeehhhHHHccC-C----hh---------hcCceeeecc-ccccCccc
Confidence 888866 588888 5666777778877765432221111111 1 01 2344566665 3334332
Q ss_pred ---CceEEEEEec--------------------ChHHHHHHHHh-----hhcCCCCh--HHHHHHHHhcCChhH--HHHH
Q 011570 284 ---GFRVGIIYSY--------------------NDQVVSCARKM-----SSFGLVSS--QTQHLIATMLSDDQF--VEKF 331 (483)
Q Consensus 284 ---GlRiG~li~~--------------------~~~l~~~~~~~-----~~~~~~s~--~~q~~~~~~l~~~~~--~~~~ 331 (483)
|--.||..+. ++.+.-.++.. +.-. .|. .+|+.++.+-..-.. -.+-
T Consensus 314 GYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKA-TSNICTAQALLANmaAmyaiYHGp~g 392 (1001)
T KOG2040|consen 314 GYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKA-TSNICTAQALLANMAAMYAIYHGPHG 392 (1001)
T ss_pred cCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhcc-chhhhHHHHHHHHHHHHHhhhcCcHH
Confidence 1111111110 11111111110 0001 111 244444433221000 0123
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEE
Q 011570 332 IAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWF 411 (483)
Q Consensus 332 ~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~i 411 (483)
+++..+++....-.+...|+..|-++..-. ||=.+++.-.- +..++..+.+++ +|-++- + +++.+
T Consensus 393 L~~IArrvh~~T~~l~~~l~~aghel~~k~--fFDTLkI~~~~------s~~~~l~rA~~~-~iNlr~---~---ed~ti 457 (1001)
T KOG2040|consen 393 LKEIARRVHNLTLILAEGLKNAGHELQHKP--FFDTLKIRCGC------SAEEVLDRAAKR-QINLRL---V---EDGTI 457 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcchhhcccc--ccceEEEEecC------cHHHHHHHHHhh-cCceEE---e---ecCce
Confidence 556666667777788888888875554322 56555553211 122445555543 565442 1 35678
Q ss_pred EEEecc-CCHHHHHHHHHHHH
Q 011570 412 RVCFAN-MDDRTMEIALSRIT 431 (483)
Q Consensus 412 Ris~~~-~~~e~l~~~l~~L~ 431 (483)
=+++-. .++++++.++..+.
T Consensus 458 gvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 458 GVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred EEeecccccHHHHHHHHHHHc
Confidence 888865 47888888877765
No 397
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=84.40 E-value=27 Score=33.61 Aligned_cols=105 Identities=14% Similarity=0.213 Sum_probs=60.7
Q ss_pred cCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhc--CcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 117 FDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRT--GVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 117 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~--G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
++.+-|+||.|++..=..+..-|.+.|-++++.+-.=.+..+..+... | ++..+-+|- -+.+++.+...+-+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdi-----s~~eei~~~a~~Vk 109 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDI-----SDREEIYRLAKKVK 109 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecC-----CCHHHHHHHHHHHH
Confidence 455667777776655555556688888877666544433444444331 4 454444442 14556665555554
Q ss_pred hcCCceeEEEEeCCC---CCCcCCCCHHHHHHHHHHH
Q 011570 195 ESNIRIKGVLITNPS---NPLGTFLDRETLKDIVSFI 228 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~---NPtG~~~~~~~l~~i~~~a 228 (483)
++-.++. |+++|.. .-...-.+.+++++..++-
T Consensus 110 ~e~G~V~-ILVNNAGI~~~~~ll~~~d~ei~k~~~vN 145 (300)
T KOG1201|consen 110 KEVGDVD-ILVNNAGIVTGKKLLDCSDEEIQKTFDVN 145 (300)
T ss_pred HhcCCce-EEEeccccccCCCccCCCHHHHHHHHHHh
Confidence 5544554 6777763 2233446888888887753
No 398
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=82.89 E-value=17 Score=33.40 Aligned_cols=98 Identities=15% Similarity=0.282 Sum_probs=63.1
Q ss_pred EEEeCChhHHHHHHHHHhcCCCCeE---EEeCC-----------CCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHH
Q 011570 122 IVMSGGATGAHETVAFCLADPGDAF---LVPTP-----------YYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALE 187 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~gd~V---lv~~P-----------~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~ 187 (483)
+.+-+|+......+..++ +.|..| ++..| .-......++. .|..++...... ...-..++|.
T Consensus 4 ~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~-~gi~l~~~~~~g--~~e~eve~L~ 79 (223)
T COG2102 4 IALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEA-MGIPLVTFDTSG--EEEREVEELK 79 (223)
T ss_pred EEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHh-cCCceEEEecCc--cchhhHHHHH
Confidence 566788888877776665 344322 11111 11111122333 388888777653 2234578888
Q ss_pred HHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEE
Q 011570 188 AAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHL 235 (483)
Q Consensus 188 ~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~i 235 (483)
++++.. +..+|+ +|.+.+..++.++=.+|.+.|+.+
T Consensus 80 ~~l~~l-----~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~ 115 (223)
T COG2102 80 EALRRL-----KVDGIV-------AGAIASEYQKERVERLCEELGLKV 115 (223)
T ss_pred HHHHhC-----cccEEE-------EchhhhHHHHHHHHHHHHHhCCEE
Confidence 888754 455666 799999999999999999999753
No 399
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=82.38 E-value=9.6 Score=35.29 Aligned_cols=97 Identities=18% Similarity=0.219 Sum_probs=55.7
Q ss_pred EEEeCC-hhHHHHHHHHHhcCCCCeEEE-eCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 122 IVMSGG-ATGAHETVAFCLADPGDAFLV-PTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 122 i~it~G-~~~al~~~~~~l~~~gd~Vlv-~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
|+|+.+ +..+ ..++.+|+.++-.|.+ ..+.-......++.. |++++..+++ |.+.|.++++ .
T Consensus 1 I~V~GatG~~G-~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~-g~~vv~~d~~-------~~~~l~~al~-------g 64 (233)
T PF05368_consen 1 ILVTGATGNQG-RSVVRALLSAGFSVRALVRDPSSDRAQQLQAL-GAEVVEADYD-------DPESLVAALK-------G 64 (233)
T ss_dssp EEEETTTSHHH-HHHHHHHHHTTGCEEEEESSSHHHHHHHHHHT-TTEEEES-TT--------HHHHHHHHT-------T
T ss_pred CEEECCccHHH-HHHHHHHHhCCCCcEEEEeccchhhhhhhhcc-cceEeecccC-------CHHHHHHHHc-------C
Confidence 345544 4444 4444556556654443 443322223334554 9998865543 6888988886 5
Q ss_pred eeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEE
Q 011570 200 IKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVC 237 (483)
Q Consensus 200 ~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~ 237 (483)
+..|+++.|.+. ....+.-..+++.|.+.|+-.++
T Consensus 65 ~d~v~~~~~~~~---~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 65 VDAVFSVTPPSH---PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp CSEEEEESSCSC---CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred CceEEeecCcch---hhhhhhhhhHHHhhhccccceEE
Confidence 566777766443 23455678899999888764443
No 400
>PRK04296 thymidine kinase; Provisional
Probab=73.91 E-value=41 Score=30.16 Aligned_cols=121 Identities=16% Similarity=0.219 Sum_probs=66.3
Q ss_pred hHHHHHHHHHhcCCCCeEEEeCCCCcC---hHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 011570 129 TGAHETVAFCLADPGDAFLVPTPYYPG---FDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLI 205 (483)
Q Consensus 129 ~~al~~~~~~l~~~gd~Vlv~~P~y~~---~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l 205 (483)
+.++..+.++ ...|..|++..|.+.. ........ |.++..+.. ...+++.+.+.+ ...++.+|++
T Consensus 17 T~~l~~~~~~-~~~g~~v~i~k~~~d~~~~~~~i~~~l-g~~~~~~~~-------~~~~~~~~~~~~---~~~~~dvviI 84 (190)
T PRK04296 17 TELLQRAYNY-EERGMKVLVFKPAIDDRYGEGKVVSRI-GLSREAIPV-------SSDTDIFELIEE---EGEKIDCVLI 84 (190)
T ss_pred HHHHHHHHHH-HHcCCeEEEEeccccccccCCcEecCC-CCcccceEe-------CChHHHHHHHHh---hCCCCCEEEE
Confidence 3555555444 4567888877664322 22223332 543322221 123444444433 1235677888
Q ss_pred eCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEe
Q 011570 206 TNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVY 274 (483)
Q Consensus 206 ~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~ 274 (483)
..- ..++.+++.++++.++..|+.||+=.--.+ |.+ ..|.....+.. --+.++.+.
T Consensus 85 DEa-----q~l~~~~v~~l~~~l~~~g~~vi~tgl~~~--~~~-~~f~~~~~L~~-----~aD~V~~l~ 140 (190)
T PRK04296 85 DEA-----QFLDKEQVVQLAEVLDDLGIPVICYGLDTD--FRG-EPFEGSPYLLA-----LADKVTELK 140 (190)
T ss_pred Ecc-----ccCCHHHHHHHHHHHHHcCCeEEEEecCcc--ccc-CcCchHHHHHH-----hcCeEEEee
Confidence 766 447778888999998888988887655544 444 44445445543 235665544
No 401
>PRK08265 short chain dehydrogenase; Provisional
Probab=73.80 E-value=63 Score=30.34 Aligned_cols=100 Identities=16% Similarity=0.026 Sum_probs=52.2
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......+.. +.++..++.|- -|.+.+++.+....++..
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g 79 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-GERARFIATDI-----TDDAAIERAVATVVARFG 79 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCeeEEEEecC-----CCHHHHHHHHHHHHHHhC
Confidence 345666655554334444667788888877654433233333443 55666666543 256677777665544434
Q ss_pred ceeEEEEeCCC--CCCcCCCCHHHHHHHH
Q 011570 199 RIKGVLITNPS--NPLGTFLDRETLKDIV 225 (483)
Q Consensus 199 ~~~~i~l~~P~--NPtG~~~~~~~l~~i~ 225 (483)
+++.++ .|.. .+.+.-.+.+++++..
T Consensus 80 ~id~lv-~~ag~~~~~~~~~~~~~~~~~~ 107 (261)
T PRK08265 80 RVDILV-NLACTYLDDGLASSRADWLAAL 107 (261)
T ss_pred CCCEEE-ECCCCCCCCcCcCCHHHHHHHH
Confidence 566544 4432 2222334444554443
No 402
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=66.33 E-value=1.1e+02 Score=28.11 Aligned_cols=83 Identities=12% Similarity=0.072 Sum_probs=45.2
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
..++||.|+...=..+...|.+.|..|.+............... +.++..++.|- -|.+.+++.+.+..+.-.+
T Consensus 7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-GERVKIFPANL-----SDRDEVKALGQKAEADLEG 80 (245)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCceEEEEccC-----CCHHHHHHHHHHHHHHcCC
Confidence 45666655544334455777888887776654433333333333 44454455442 2566777766654443345
Q ss_pred eeEEEEeCC
Q 011570 200 IKGVLITNP 208 (483)
Q Consensus 200 ~~~i~l~~P 208 (483)
+.+|+.+..
T Consensus 81 id~vi~~ag 89 (245)
T PRK12936 81 VDILVNNAG 89 (245)
T ss_pred CCEEEECCC
Confidence 676665543
No 403
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=65.98 E-value=79 Score=26.99 Aligned_cols=100 Identities=17% Similarity=0.249 Sum_probs=56.1
Q ss_pred EEEeCChhHHHHHHHHHhcCCCC-eEEEeCCC--CcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 122 IVMSGGATGAHETVAFCLADPGD-AFLVPTPY--YPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~gd-~Vlv~~P~--y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
++||.|++..=..+...|.+.|+ .|++.... ....... ++.. +.++..++.|- -+.+.+++.+++...
T Consensus 3 ~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 76 (167)
T PF00106_consen 3 VLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP-GAKITFIECDL-----SDPESIRALIEEVIK 76 (167)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT-TSEEEEEESET-----TSHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc-ccccccccccc-----ccccccccccccccc
Confidence 55665554433444466666655 55554444 2222222 3333 78888888663 367888888877765
Q ss_pred cCCceeEEEEeCCCCCCcCCC--CHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPSNPLGTFL--DRETLKDIVSF 227 (483)
Q Consensus 196 ~~~~~~~i~l~~P~NPtG~~~--~~~~l~~i~~~ 227 (483)
...+...++.+....+.+... +.+++++..+.
T Consensus 77 ~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (167)
T PF00106_consen 77 RFGPLDILINNAGIFSDGSLDDLSEEELERVFRV 110 (167)
T ss_dssp HHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccchhhhhcccc
Confidence 555677666665444434333 44566665553
No 404
>PRK06500 short chain dehydrogenase; Provisional
Probab=65.52 E-value=95 Score=28.58 Aligned_cols=81 Identities=16% Similarity=0.166 Sum_probs=43.5
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
..++||.|+...=..+...|.+.|..|++....-.......... |.++..+..|- -|.+.+.+.+....+...+
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~ 80 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-GESALVIRADA-----GDVAAQKALAQALAEAFGR 80 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-CCceEEEEecC-----CCHHHHHHHHHHHHHHhCC
Confidence 35666665554444555667788877776654332233333333 66666666543 2455555555443333345
Q ss_pred eeEEEEe
Q 011570 200 IKGVLIT 206 (483)
Q Consensus 200 ~~~i~l~ 206 (483)
+..++.+
T Consensus 81 id~vi~~ 87 (249)
T PRK06500 81 LDAVFIN 87 (249)
T ss_pred CCEEEEC
Confidence 6665544
No 405
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=64.39 E-value=58 Score=30.52 Aligned_cols=100 Identities=21% Similarity=0.250 Sum_probs=63.7
Q ss_pred cEEEeCChhHHHHHHH-HHhcCCCCeEEEeCCCCcChHHHHhhhcC-cEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 121 RIVMSGGATGAHETVA-FCLADPGDAFLVPTPYYPGFDRDLRWRTG-VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 121 ~i~it~G~~~al~~~~-~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
.|++-+|++.+|-... ..|.+.|-+|+...---.......... + .++.++.+|- -|.+++++++.....+-.
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~-~~~~~~~~~~DV-----tD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEI-GAGAALALALDV-----TDRAAVEAAIEALPEEFG 80 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhh-ccCceEEEeecc-----CCHHHHHHHHHHHHHhhC
Confidence 5667777777776554 778899998888876666565655555 6 4566666553 367787777776655545
Q ss_pred ceeEEEEeCCCCCCcCCC---CHHHHHHHHHH
Q 011570 199 RIKGVLITNPSNPLGTFL---DRETLKDIVSF 227 (483)
Q Consensus 199 ~~~~i~l~~P~NPtG~~~---~~~~l~~i~~~ 227 (483)
+++ ++++|..=..|..+ ..++++.+++.
T Consensus 81 ~iD-iLvNNAGl~~g~~~~~~~~~dw~~Mid~ 111 (246)
T COG4221 81 RID-ILVNNAGLALGDPLDEADLDDWDRMIDT 111 (246)
T ss_pred ccc-EEEecCCCCcCChhhhCCHHHHHHHHHH
Confidence 676 46666643334444 45556665554
No 406
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=63.55 E-value=1.4e+02 Score=29.08 Aligned_cols=61 Identities=13% Similarity=0.193 Sum_probs=41.8
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccc
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIY 241 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay 241 (483)
+..++.++++..++.....-.+...|+++ -+=|-| ++.+...+|++.|++.|..+++|-.-
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~Vvls-GSlP~g--~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVLS-GSLPPG--VPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEEe-CCCCCC--CCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 45677777777666554422344555544 444444 47788999999999999999999764
No 407
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=63.18 E-value=17 Score=35.46 Aligned_cols=68 Identities=18% Similarity=0.276 Sum_probs=46.8
Q ss_pred HHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEE
Q 011570 158 RDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVC 237 (483)
Q Consensus 158 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~ 237 (483)
+.+... +.++..+.+.++.+|.+....+.+.-.. +.. .++ .+.|..+|.+++++|++.|+++|+-||-
T Consensus 23 d~ma~~-K~N~lhlHl~D~~~~~le~~~~p~l~~~----g~~------~~~-~~~~~~yT~~di~elv~yA~~rgI~viP 90 (303)
T cd02742 23 DVLARY-KINTFHWHLTDDQAWRIESKKFPELAEK----GGQ------INP-RSPGGFYTYAQLKDIIEYAAARGIEVIP 90 (303)
T ss_pred HHHHHh-CCcEEEEeeecCCCceEeeCccchhhhh----ccc------ccC-CCCCCeECHHHHHHHHHHHHHcCCEEEE
Confidence 334444 8899999988777888876665544221 111 122 2445689999999999999999987663
No 408
>PRK06483 dihydromonapterin reductase; Provisional
Probab=63.00 E-value=1.2e+02 Score=27.66 Aligned_cols=77 Identities=16% Similarity=0.176 Sum_probs=40.3
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
.++||.|+...=..+...|.+.|..|++....-......+... |...+..++ -|.+.+++.+.+....-.++
T Consensus 4 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~-------~~~~~~~~~~~~~~~~~~~i 75 (236)
T PRK06483 4 PILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQA-GAQCIQADF-------STNAGIMAFIDELKQHTDGL 75 (236)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-CCEEEEcCC-------CCHHHHHHHHHHHHhhCCCc
Confidence 4666665554444455667778887776654332233334433 655444332 25666777666544332345
Q ss_pred eEEEE
Q 011570 201 KGVLI 205 (483)
Q Consensus 201 ~~i~l 205 (483)
+.++.
T Consensus 76 d~lv~ 80 (236)
T PRK06483 76 RAIIH 80 (236)
T ss_pred cEEEE
Confidence 65443
No 409
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=62.47 E-value=13 Score=36.68 Aligned_cols=69 Identities=17% Similarity=0.268 Sum_probs=46.8
Q ss_pred HHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEE
Q 011570 158 RDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVC 237 (483)
Q Consensus 158 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~ 237 (483)
+.+... +.++..+.+.++.+|.+....+.+.-.. +.. .....+.|..+|.+++++|++.|+++|+-||-
T Consensus 25 d~ma~~-KlN~lhlHLtD~~~~rle~~~~P~lt~~----ga~------~~~~~~~~~~YT~~di~elv~yA~~rgI~vIP 93 (329)
T cd06568 25 DLLALY-KLNVLHLHLTDDQGWRIEIKSWPKLTEI----GGS------TEVGGGPGGYYTQEDYKDIVAYAAERHITVVP 93 (329)
T ss_pred HHHHHh-CCcEEEEEeecCCcceeeecCccccccc----ccc------cccCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 334444 8889899988777888766555432110 110 12234567789999999999999999987764
No 410
>PRK05872 short chain dehydrogenase; Provisional
Probab=61.81 E-value=1.3e+02 Score=28.96 Aligned_cols=85 Identities=22% Similarity=0.175 Sum_probs=46.8
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh-cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR-TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
....++||.|+...=..+...|.+.|..|++..-.-.......+.. .+.++..+..|- -|.+.+++.+.+...+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADV-----TDLAAMQAAAEEAVER 82 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 4456777766554444455667788988877665433333333332 134555544442 2677777777665444
Q ss_pred CCceeEEEEeCC
Q 011570 197 NIRIKGVLITNP 208 (483)
Q Consensus 197 ~~~~~~i~l~~P 208 (483)
..+++.+| +|.
T Consensus 83 ~g~id~vI-~nA 93 (296)
T PRK05872 83 FGGIDVVV-ANA 93 (296)
T ss_pred cCCCCEEE-ECC
Confidence 34566544 444
No 411
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=60.82 E-value=98 Score=28.21 Aligned_cols=96 Identities=15% Similarity=0.126 Sum_probs=55.8
Q ss_pred cCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 117 FDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 117 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
++...|+|..|+..|...+ ..|++.|-.|.+-+|....-...+... | ++..+.- .| ..+.+.
T Consensus 7 l~gk~vlVvGgG~va~rk~-~~Ll~~ga~VtVvsp~~~~~l~~l~~~-~-~i~~~~~----~~--~~~dl~--------- 68 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKA-RLLLKAGAQLRVIAEELESELTLLAEQ-G-GITWLAR----CF--DADILE--------- 68 (205)
T ss_pred cCCCeEEEECcCHHHHHHH-HHHHHCCCEEEEEcCCCCHHHHHHHHc-C-CEEEEeC----CC--CHHHhC---------
Confidence 4556788888888887766 556677777888888765333333322 3 3433331 12 222221
Q ss_pred CCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEE-EEccc
Q 011570 197 NIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHL-VCDEI 240 (483)
Q Consensus 197 ~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~i-I~Dea 240 (483)
...+ ++..|++|. --..++..|++.++++ ++|+.
T Consensus 69 --~~~l-Vi~at~d~~-------ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 69 --GAFL-VIAATDDEE-------LNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred --CcEE-EEECCCCHH-------HHHHHHHHHHHcCCEEEECCCc
Confidence 3344 445555541 2367888998999877 35554
No 412
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=60.72 E-value=50 Score=28.89 Aligned_cols=89 Identities=16% Similarity=0.164 Sum_probs=50.1
Q ss_pred EEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCcee
Q 011570 122 IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIK 201 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 201 (483)
|+|+.|+...=..++..|++.|-.|......-..... . .+++++...+ .|++.+.+++. +..
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~-~~~~~~~~d~-------~d~~~~~~al~-------~~d 62 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---S-PGVEIIQGDL-------FDPDSVKAALK-------GAD 62 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---C-TTEEEEESCT-------TCHHHHHHHHT-------TSS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---c-cccccceeee-------hhhhhhhhhhh-------hcc
Confidence 4455443333344556666777666655544333332 3 3777766543 36788888875 456
Q ss_pred EEEEeCCCCCCcCCCCHHHHHHHHHHHhhcC
Q 011570 202 GVLITNPSNPLGTFLDRETLKDIVSFINEKN 232 (483)
Q Consensus 202 ~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~ 232 (483)
+|+.+.+.++. ..+..+.+++.+++.+
T Consensus 63 ~vi~~~~~~~~----~~~~~~~~~~a~~~~~ 89 (183)
T PF13460_consen 63 AVIHAAGPPPK----DVDAAKNIIEAAKKAG 89 (183)
T ss_dssp EEEECCHSTTT----HHHHHHHHHHHHHHTT
T ss_pred hhhhhhhhhcc----cccccccccccccccc
Confidence 67766544433 2555666777666544
No 413
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=60.34 E-value=93 Score=28.84 Aligned_cols=97 Identities=13% Similarity=0.207 Sum_probs=60.5
Q ss_pred EEEeCChhHHHHHHHHHhcCCCCeEEE--eCCC----C--c-----ChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHH
Q 011570 122 IVMSGGATGAHETVAFCLADPGDAFLV--PTPY----Y--P-----GFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEA 188 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~gd~Vlv--~~P~----y--~-----~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 188 (483)
++.-+|+......+..+..+ -+.+.+ ..|. | . .....++. .|..++.++... ...--.+.|.+
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~a-lgipl~~~~~~~--~~e~~~e~l~~ 79 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAES-IGIPLIKLYTEG--TEEDEVEELKG 79 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHH-cCCCeEEeecCC--CccHHHHHHHH
Confidence 45678888888888887766 443322 1111 1 1 11122333 388887766432 12223566666
Q ss_pred HHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcE
Q 011570 189 AYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIH 234 (483)
Q Consensus 189 ~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~ 234 (483)
++++. ++.+|+ +|.+.+..++..+-+.|.+.|+.
T Consensus 80 ~l~~~-----gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~ 113 (223)
T TIGR00290 80 ILHTL-----DVEAVV-------FGAIYSEYQKTRIERVCRELGLK 113 (223)
T ss_pred HHHHc-----CCCEEE-------ECCcccHHHHHHHHHHHHhcCCE
Confidence 66543 456666 79999999999999999999874
No 414
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=59.90 E-value=1.5e+02 Score=27.56 Aligned_cols=81 Identities=16% Similarity=0.094 Sum_probs=46.5
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
..++||.|+...=..+...|.+.|.+|++....-.......... +.++..+..|- -|.+.+++++.....+..+
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~ 80 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-GPAAIAVSLDV-----TRQDSIDRIVAAAVERFGG 80 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-CCceEEEEccC-----CCHHHHHHHHHHHHHHcCC
Confidence 35666666554444555667788988887766544333333333 44555555542 3567777777655444345
Q ss_pred eeEEEEe
Q 011570 200 IKGVLIT 206 (483)
Q Consensus 200 ~~~i~l~ 206 (483)
+++++.+
T Consensus 81 id~li~~ 87 (257)
T PRK07067 81 IDILFNN 87 (257)
T ss_pred CCEEEEC
Confidence 6666544
No 415
>PRK07063 short chain dehydrogenase; Provisional
Probab=59.06 E-value=1.5e+02 Score=27.50 Aligned_cols=84 Identities=18% Similarity=0.171 Sum_probs=44.4
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh----cCcEEEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR----TGVQLVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~----~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
+...++||.|+...=..+...|.+.|..|++..-.-.......... .+.++..+..|- -|.+.+++.+.+.
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~ 80 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADV-----TDAASVAAAVAAA 80 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccC-----CCHHHHHHHHHHH
Confidence 3445777766554444455677888888776654322222222221 145565666543 2456666666554
Q ss_pred HhcCCceeEEEEe
Q 011570 194 QESNIRIKGVLIT 206 (483)
Q Consensus 194 ~~~~~~~~~i~l~ 206 (483)
.++-.++..++.+
T Consensus 81 ~~~~g~id~li~~ 93 (260)
T PRK07063 81 EEAFGPLDVLVNN 93 (260)
T ss_pred HHHhCCCcEEEEC
Confidence 4333356655443
No 416
>smart00642 Aamy Alpha-amylase domain.
Probab=58.80 E-value=43 Score=29.43 Aligned_cols=26 Identities=19% Similarity=0.393 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccccc
Q 011570 217 DRETLKDIVSFINEKNIHLVCDEIYA 242 (483)
Q Consensus 217 ~~~~l~~i~~~a~~~~~~iI~Deay~ 242 (483)
+.++++++++.|+++|+-||.|=+..
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 56899999999999999999999975
No 417
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=58.73 E-value=35 Score=33.08 Aligned_cols=78 Identities=9% Similarity=0.114 Sum_probs=42.8
Q ss_pred EEeCCCCcChHHHHhhh-cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHH
Q 011570 147 LVPTPYYPGFDRDLRWR-TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIV 225 (483)
Q Consensus 147 lv~~P~y~~~~~~~~~~-~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~ 225 (483)
+.--|+|+...+..... ...-++.+| .+.+.++++++.+. .+|.+++.+-.- +.++-++|.
T Consensus 48 v~G~~~y~sv~dlp~~~~~DlAvi~vp----------~~~v~~~l~e~~~~--gvk~avI~s~Gf------~~~~~~~l~ 109 (291)
T PRK05678 48 VLGLPVFNTVAEAVEATGANASVIYVP----------PPFAADAILEAIDA--GIDLIVCITEGI------PVLDMLEVK 109 (291)
T ss_pred EeCeeccCCHHHHhhccCCCEEEEEcC----------HHHHHHHHHHHHHC--CCCEEEEECCCC------CHHHHHHHH
Confidence 34455676666654421 133344444 23334444443333 566665554332 345556899
Q ss_pred HHHhhcCcEEEEccccc
Q 011570 226 SFINEKNIHLVCDEIYA 242 (483)
Q Consensus 226 ~~a~~~~~~iI~Deay~ 242 (483)
++|+++|+.|+==.+.+
T Consensus 110 ~~a~~~girvlGPNc~G 126 (291)
T PRK05678 110 AYLERKKTRLIGPNCPG 126 (291)
T ss_pred HHHHHcCCEEECCCCCc
Confidence 99999999877555543
No 418
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=57.75 E-value=1.5e+02 Score=27.12 Aligned_cols=85 Identities=19% Similarity=0.151 Sum_probs=45.8
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh-cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR-TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......... .+.++..+..|- .|.+.+.+.+.+.....
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADV-----SDEADVEAAVAAALERF 79 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHHHHHh
Confidence 346777765554444455667778877776654433222222222 134455555542 36777777776543333
Q ss_pred CceeEEEEeCC
Q 011570 198 IRIKGVLITNP 208 (483)
Q Consensus 198 ~~~~~i~l~~P 208 (483)
.++.+|+.+..
T Consensus 80 ~~~d~vi~~ag 90 (251)
T PRK07231 80 GSVDILVNNAG 90 (251)
T ss_pred CCCCEEEECCC
Confidence 45676665543
No 419
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=57.04 E-value=18 Score=36.13 Aligned_cols=63 Identities=13% Similarity=0.237 Sum_probs=44.9
Q ss_pred HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEE
Q 011570 159 DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVC 237 (483)
Q Consensus 159 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~ 237 (483)
.+... ..++..+.+.++.+|.+....+.+.-.. | ....|..+|.+++++|++.|+++|+-||-
T Consensus 26 ~ma~~-KlN~lh~HltDd~~~rle~~~~P~Lt~~----g-----------a~~~~~~YT~~di~eiv~yA~~rgI~vIP 88 (348)
T cd06562 26 AMAYN-KLNVLHWHITDSQSFPLESPSYPELSKK----G-----------AYSPSEVYTPEDVKEIVEYARLRGIRVIP 88 (348)
T ss_pred HHHHh-CCcEEEEeEEcCCCceEeeCCCchhhhc----c-----------CcCCCceECHHHHHHHHHHHHHcCCEEEE
Confidence 34444 8888888887777888876665543211 1 11346789999999999999999987764
No 420
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=57.00 E-value=83 Score=24.65 Aligned_cols=68 Identities=10% Similarity=0.126 Sum_probs=44.6
Q ss_pred cChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCc
Q 011570 154 PGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNI 233 (483)
Q Consensus 154 ~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~ 233 (483)
..|...++.. |++.+.. ..++++.-....|++.+. ++++|++. |+. .+..-...+-+.|+++|+
T Consensus 13 ~~~~~~~~~~-G~~~~~h--g~~~~~~~~~~~l~~~i~-------~aD~VIv~-----t~~-vsH~~~~~vk~~akk~~i 76 (97)
T PF10087_consen 13 RRYKRILEKY-GGKLIHH--GRDGGDEKKASRLPSKIK-------KADLVIVF-----TDY-VSHNAMWKVKKAAKKYGI 76 (97)
T ss_pred HHHHHHHHHc-CCEEEEE--ecCCCCccchhHHHHhcC-------CCCEEEEE-----eCC-cChHHHHHHHHHHHHcCC
Confidence 4466667775 9998887 222333334445777664 55777654 333 466778999999999998
Q ss_pred EEEE
Q 011570 234 HLVC 237 (483)
Q Consensus 234 ~iI~ 237 (483)
+++.
T Consensus 77 p~~~ 80 (97)
T PF10087_consen 77 PIIY 80 (97)
T ss_pred cEEE
Confidence 8764
No 421
>PRK06182 short chain dehydrogenase; Validated
Probab=55.16 E-value=1.5e+02 Score=27.88 Aligned_cols=96 Identities=15% Similarity=0.161 Sum_probs=47.3
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
.++||.|+...=..+...|.+.|..|++..-.-..... +... +..++..++. |.+.+++.+.+..+...++
T Consensus 5 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~-~~~~-~~~~~~~Dv~-------~~~~~~~~~~~~~~~~~~i 75 (273)
T PRK06182 5 VALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMED-LASL-GVHPLSLDVT-------DEASIKAAVDTIIAEEGRI 75 (273)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHhC-CCeEEEeeCC-------CHHHHHHHHHHHHHhcCCC
Confidence 46666554433334445677889888766543222211 2222 5555554432 5666766666544433456
Q ss_pred eEEEEeCCCCCCcCC--CCHHHHHHHH
Q 011570 201 KGVLITNPSNPLGTF--LDRETLKDIV 225 (483)
Q Consensus 201 ~~i~l~~P~NPtG~~--~~~~~l~~i~ 225 (483)
..+|.+-...+.|.. .+.++.+.+.
T Consensus 76 d~li~~ag~~~~~~~~~~~~~~~~~~~ 102 (273)
T PRK06182 76 DVLVNNAGYGSYGAIEDVPIDEARRQF 102 (273)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHH
Confidence 655544333333322 2444444443
No 422
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=54.75 E-value=1.8e+02 Score=26.96 Aligned_cols=80 Identities=18% Similarity=0.242 Sum_probs=40.0
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
..++||.|+...=..+...|.+.|..|++..-.-..-...+... +... ++.|- -|.+.+++++....++..+
T Consensus 8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~-~~~~--~~~Dl-----~~~~~~~~~~~~~~~~~~~ 79 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK-GVFT--IKCDV-----GNRDQVKKSKEVVEKEFGR 79 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhC-CCeE--EEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 45666665544334445667788877765422111111222222 4444 34332 2567777777655444345
Q ss_pred eeEEEEeC
Q 011570 200 IKGVLITN 207 (483)
Q Consensus 200 ~~~i~l~~ 207 (483)
++.++.+.
T Consensus 80 id~li~~a 87 (255)
T PRK06463 80 VDVLVNNA 87 (255)
T ss_pred CCEEEECC
Confidence 66655443
No 423
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=54.68 E-value=1.5e+02 Score=27.42 Aligned_cols=97 Identities=11% Similarity=0.106 Sum_probs=57.5
Q ss_pred EEEeCChhHHHHHHHHHhcCCCCeEE--EeCCC------C-----cChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHH
Q 011570 122 IVMSGGATGAHETVAFCLADPGDAFL--VPTPY------Y-----PGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEA 188 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~gd~Vl--v~~P~------y-----~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 188 (483)
++..+|+-.....+..++-. .+.+. +..|. | ......++.+ |..++.+.... .+.-..+++.+
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~al-giPl~~~~~~~--~~e~~~~~l~~ 79 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAV-GIPLIKLYTSG--EEEKEVEDLAG 79 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHc-CCCeEEEEcCC--chhHHHHHHHH
Confidence 44567877777777766554 44322 22221 1 1122234444 88887776542 12222344444
Q ss_pred HHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcE
Q 011570 189 AYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIH 234 (483)
Q Consensus 189 ~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~ 234 (483)
.+++ . ++.+|+ +|.+.+..++..+-+.|.+.|+.
T Consensus 80 ~l~~---~--gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~ 113 (222)
T TIGR00289 80 QLGE---L--DVEALC-------IGAIESNYQKSRIDKVCRELGLK 113 (222)
T ss_pred HHHH---c--CCCEEE-------ECccccHHHHHHHHHHHHHcCCE
Confidence 4433 2 466666 79999999999999999999874
No 424
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=54.68 E-value=1.8e+02 Score=26.98 Aligned_cols=82 Identities=16% Similarity=0.172 Sum_probs=44.4
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCc-ChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYP-GFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~-~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
..++||.|++..=..+...|.+.|..|++....-. ......+.. +.++..+..|- -|.+.+++.+++..++-.
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g 82 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEAL-GRKFHFITADL-----IQQKDIDSIVSQAVEVMG 82 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHc-CCeEEEEEeCC-----CCHHHHHHHHHHHHHHcC
Confidence 34566665554444555678889988876543211 111222332 66666666553 356777777765544434
Q ss_pred ceeEEEEeCC
Q 011570 199 RIKGVLITNP 208 (483)
Q Consensus 199 ~~~~i~l~~P 208 (483)
+++.++ +|.
T Consensus 83 ~iD~lv-~~a 91 (251)
T PRK12481 83 HIDILI-NNA 91 (251)
T ss_pred CCCEEE-ECC
Confidence 566544 444
No 425
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=54.35 E-value=33 Score=33.89 Aligned_cols=55 Identities=27% Similarity=0.427 Sum_probs=35.9
Q ss_pred CCCeEEEeCCCCc-ChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeC-CCCCC
Q 011570 142 PGDAFLVPTPYYP-GFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITN-PSNPL 212 (483)
Q Consensus 142 ~gd~Vlv~~P~y~-~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~-P~NPt 212 (483)
++.+|++-+-..- ...+.+... |+++.-+|.+ .+.+++.+. +++.|+++| |.+|.
T Consensus 178 ~~~~Vv~iD~GvK~nIlr~L~~r-g~~vtVVP~~------t~~eeIl~~---------~pDGiflSNGPGDP~ 234 (368)
T COG0505 178 PGKHVVVIDFGVKRNILRELVKR-GCRVTVVPAD------TSAEEILAL---------NPDGIFLSNGPGDPA 234 (368)
T ss_pred CCcEEEEEEcCccHHHHHHHHHC-CCeEEEEcCC------CCHHHHHhh---------CCCEEEEeCCCCChh
Confidence 3456666664432 344445554 9999998865 356665543 778999987 78984
No 426
>PRK05717 oxidoreductase; Validated
Probab=54.02 E-value=1.7e+02 Score=27.21 Aligned_cols=83 Identities=12% Similarity=0.053 Sum_probs=43.8
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
....++||.|+...=..+...|.+.|.+|++....-.......+.. +.++..+..|- -|.+.+.+++.+..++-
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~ 82 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-GENAWFIAMDV-----ADEAQVAAGVAEVLGQF 82 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-CCceEEEEccC-----CCHHHHHHHHHHHHHHh
Confidence 3345666665544434455667778888877654433233333333 54555555543 24566666665543333
Q ss_pred CceeEEEEe
Q 011570 198 IRIKGVLIT 206 (483)
Q Consensus 198 ~~~~~i~l~ 206 (483)
.++..++.+
T Consensus 83 g~id~li~~ 91 (255)
T PRK05717 83 GRLDALVCN 91 (255)
T ss_pred CCCCEEEEC
Confidence 356655544
No 427
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=53.10 E-value=2.1e+02 Score=28.03 Aligned_cols=128 Identities=10% Similarity=0.108 Sum_probs=73.2
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeC---CCCcChHHHHhhhcC
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPT---PYYPGFDRDLRWRTG 165 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~---P~y~~~~~~~~~~~G 165 (483)
.|....|.....+.+++-+.. +...++++-++..+- .++.+..+ -.|++.. |-=......+.. .|
T Consensus 66 ~~~na~~~~~~a~~iarql~~--------~~~dviv~i~tp~Aq-~~~s~~~~--iPVV~aavtd~v~a~Lv~~~~~-pg 133 (322)
T COG2984 66 DYQNAQGDLGTAAQIARQLVG--------DKPDVIVAIATPAAQ-ALVSATKT--IPVVFAAVTDPVGAKLVKSLEQ-PG 133 (322)
T ss_pred EeecCCCChHHHHHHHHHhhc--------CCCcEEEecCCHHHH-HHHHhcCC--CCEEEEccCchhhccCCccccC-CC
Confidence 355566777777788877652 445777777766653 33344322 2244332 222222222222 25
Q ss_pred cEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE-EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccc
Q 011570 166 VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV-LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIY 241 (483)
Q Consensus 166 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i-~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay 241 (483)
.++..+.- ..++++-.++++.. -++.+-| ++.||+-+ .+...++++.+.+++.|+-|++=-+-
T Consensus 134 ~NvTGvsD------~~~v~q~i~lik~~---~Pnak~Igv~Y~p~E~----ns~~l~eelk~~A~~~Gl~vve~~v~ 197 (322)
T COG2984 134 GNVTGVSD------LLPVAQQIELIKAL---LPNAKSIGVLYNPGEA----NSVSLVEELKKEARKAGLEVVEAAVT 197 (322)
T ss_pred CceeecCC------cchHHHHHHHHHHh---CCCCeeEEEEeCCCCc----ccHHHHHHHHHHHHHCCCEEEEEecC
Confidence 66666541 13445444444432 2455666 88888654 36677899999999999988875553
No 428
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=51.07 E-value=53 Score=31.74 Aligned_cols=78 Identities=9% Similarity=0.120 Sum_probs=42.3
Q ss_pred EEeCCCCcChHHHHhhh-cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHH
Q 011570 147 LVPTPYYPGFDRDLRWR-TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIV 225 (483)
Q Consensus 147 lv~~P~y~~~~~~~~~~-~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~ 225 (483)
+..-|+|+...+..... ...-++.+| .+.+.++++++.+. .++.+++.+..- +..+-++|.
T Consensus 46 v~G~~~y~sv~dlp~~~~~Dlavi~vp----------a~~v~~~l~e~~~~--Gvk~avIis~Gf------~e~~~~~l~ 107 (286)
T TIGR01019 46 VLGLPVFDSVKEAVEETGANASVIFVP----------APFAADAIFEAIDA--GIELIVCITEGI------PVHDMLKVK 107 (286)
T ss_pred ecCeeccCCHHHHhhccCCCEEEEecC----------HHHHHHHHHHHHHC--CCCEEEEECCCC------CHHHHHHHH
Confidence 34455676666654431 123334433 23334444443333 566666654442 333457899
Q ss_pred HHHhhcCcEEEEccccc
Q 011570 226 SFINEKNIHLVCDEIYA 242 (483)
Q Consensus 226 ~~a~~~~~~iI~Deay~ 242 (483)
++|+++|+.|+==.+.+
T Consensus 108 ~~a~~~girilGPNc~G 124 (286)
T TIGR01019 108 RYMEESGTRLIGPNCPG 124 (286)
T ss_pred HHHHHcCCEEECCCCce
Confidence 99999998877555543
No 429
>PRK06139 short chain dehydrogenase; Provisional
Probab=50.70 E-value=2.2e+02 Score=27.96 Aligned_cols=81 Identities=16% Similarity=0.177 Sum_probs=43.3
Q ss_pred CCcEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 119 PDRIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 119 ~~~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
...++||.+ +.+|- .+...|.+.|..|++..-.-..... .++.. |.++..++.|- -|.+.+++++....
T Consensus 7 ~k~vlITGA-s~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~-g~~~~~~~~Dv-----~d~~~v~~~~~~~~ 79 (330)
T PRK06139 7 GAVVVITGA-SSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL-GAEVLVVPTDV-----TDADQVKALATQAA 79 (330)
T ss_pred CCEEEEcCC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeC-----CCHHHHHHHHHHHH
Confidence 344555544 44444 4445677888887776543222222 22232 66666666543 25677777776554
Q ss_pred hcCCceeEEEEe
Q 011570 195 ESNIRIKGVLIT 206 (483)
Q Consensus 195 ~~~~~~~~i~l~ 206 (483)
+...++..+|.+
T Consensus 80 ~~~g~iD~lVnn 91 (330)
T PRK06139 80 SFGGRIDVWVNN 91 (330)
T ss_pred HhcCCCCEEEEC
Confidence 443456655443
No 430
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=50.44 E-value=29 Score=34.70 Aligned_cols=74 Identities=15% Similarity=0.275 Sum_probs=46.6
Q ss_pred HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCC-----CCCCcCCCCHHHHHHHHHHHhhcCc
Q 011570 159 DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNP-----SNPLGTFLDRETLKDIVSFINEKNI 233 (483)
Q Consensus 159 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P-----~NPtG~~~~~~~l~~i~~~a~~~~~ 233 (483)
.+... +.++..+.+.++.+|.+.+..+.+.-.. +.....-...+| ..|.|..+|.+++++|++.|+++|+
T Consensus 26 ~ma~~-K~N~lhlHltDdq~~rle~~~~P~Lt~~----ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI 100 (357)
T cd06563 26 LMALY-KLNVFHWHLTDDQGWRIEIKKYPKLTEV----GAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGI 100 (357)
T ss_pred HHHHh-ccceEEEeeecCCCceecccCcchhhhc----ccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCC
Confidence 34443 8888888887777888876665443211 000000000012 2355778999999999999999998
Q ss_pred EEEE
Q 011570 234 HLVC 237 (483)
Q Consensus 234 ~iI~ 237 (483)
-||-
T Consensus 101 ~VIP 104 (357)
T cd06563 101 TVIP 104 (357)
T ss_pred EEEE
Confidence 7764
No 431
>PRK08862 short chain dehydrogenase; Provisional
Probab=50.28 E-value=1.9e+02 Score=26.59 Aligned_cols=82 Identities=9% Similarity=0.084 Sum_probs=45.9
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
..+++|.|+...=..+...|.+.|..|++..-.-...... +... |.++..+.+|. -|.+.+++.+.+..++
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 79 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL-TDNVYSFQLKD-----FSQESIRHLFDAIEQQ 79 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCCeEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 4566666655443445566788998888865443332222 2232 56666666653 2567777776654443
Q ss_pred CC-ceeEEEEeCC
Q 011570 197 NI-RIKGVLITNP 208 (483)
Q Consensus 197 ~~-~~~~i~l~~P 208 (483)
-. ++.. +++|.
T Consensus 80 ~g~~iD~-li~na 91 (227)
T PRK08862 80 FNRAPDV-LVNNW 91 (227)
T ss_pred hCCCCCE-EEECC
Confidence 22 5664 44444
No 432
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=49.89 E-value=2.1e+02 Score=26.32 Aligned_cols=86 Identities=20% Similarity=0.164 Sum_probs=45.8
Q ss_pred EEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 122 IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
++||.|+...=..+...|.+.|-.|++..-.-...... +... +.++..+..|- -|.+.+.+++....+...
T Consensus 3 ~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-----~~~~~i~~~~~~~~~~~~ 76 (254)
T TIGR02415 3 ALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA-GGKAVAYKLDV-----SDKDQVFSAIDQAAEKFG 76 (254)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCC-----CCHHHHHHHHHHHHHHcC
Confidence 55665554444455566778887776654332111111 2222 55666665543 256777777765544444
Q ss_pred ceeEEEEeCCCCCCc
Q 011570 199 RIKGVLITNPSNPLG 213 (483)
Q Consensus 199 ~~~~i~l~~P~NPtG 213 (483)
++..++.+....+.+
T Consensus 77 ~id~vi~~ag~~~~~ 91 (254)
T TIGR02415 77 GFDVMVNNAGVAPIT 91 (254)
T ss_pred CCCEEEECCCcCCCC
Confidence 567666655444444
No 433
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=49.72 E-value=24 Score=34.60 Aligned_cols=56 Identities=11% Similarity=0.318 Sum_probs=39.0
Q ss_pred CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEE
Q 011570 165 GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVC 237 (483)
Q Consensus 165 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~ 237 (483)
+.++..+.+.++.+|.+....+.+.-. .. ..|..+|.+++++|++.|+++|+-||-
T Consensus 31 KlN~lh~HltDd~~~rle~~~~P~lt~----------------~g-~~~~~yT~~di~elv~yA~~rgI~vIP 86 (311)
T cd06570 31 KLNVFHWHLTDDQGFRIESKKYPKLQQ----------------KA-SDGLYYTQEQIREVVAYARDRGIRVVP 86 (311)
T ss_pred CCeEEEEEEecCCCceeecCCCccccc----------------cC-CCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 788888887766677765544322110 00 135679999999999999999986663
No 434
>PRK08263 short chain dehydrogenase; Provisional
Probab=49.01 E-value=2.2e+02 Score=26.76 Aligned_cols=80 Identities=20% Similarity=0.153 Sum_probs=40.6
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
.++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+....+.-.++
T Consensus 5 ~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 5 VWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-GDRLLPLALDV-----TDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-cCCeeEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 4666655443334455667778887776553322222222222 33444445442 25666766666543333356
Q ss_pred eEEEEe
Q 011570 201 KGVLIT 206 (483)
Q Consensus 201 ~~i~l~ 206 (483)
.+|+.+
T Consensus 79 d~vi~~ 84 (275)
T PRK08263 79 DIVVNN 84 (275)
T ss_pred CEEEEC
Confidence 655544
No 435
>PRK07825 short chain dehydrogenase; Provisional
Probab=48.86 E-value=2.3e+02 Score=26.52 Aligned_cols=79 Identities=15% Similarity=0.051 Sum_probs=38.5
Q ss_pred CcEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 120 DRIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 120 ~~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
..++||.|+ .+|- .+...|.+.|..|++....-.......... + ++..+..|- -|.+.+++.+........
T Consensus 6 ~~ilVtGas-ggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~-~-~~~~~~~D~-----~~~~~~~~~~~~~~~~~~ 77 (273)
T PRK07825 6 KVVAITGGA-RGIGLATARALAALGARVAIGDLDEALAKETAAEL-G-LVVGGPLDV-----TDPASFAAFLDAVEADLG 77 (273)
T ss_pred CEEEEeCCC-chHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-c-cceEEEccC-----CCHHHHHHHHHHHHHHcC
Confidence 356666554 4444 444567778877776643322222222322 3 233333332 256677776665544333
Q ss_pred ceeEEEEe
Q 011570 199 RIKGVLIT 206 (483)
Q Consensus 199 ~~~~i~l~ 206 (483)
++..++.+
T Consensus 78 ~id~li~~ 85 (273)
T PRK07825 78 PIDVLVNN 85 (273)
T ss_pred CCCEEEEC
Confidence 55544433
No 436
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=48.85 E-value=1.2e+02 Score=27.93 Aligned_cols=98 Identities=11% Similarity=0.151 Sum_probs=52.2
Q ss_pred EEEeCChhHHHHHHHHHhcCCCCeEE----Ee---------CCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHH
Q 011570 122 IVMSGGATGAHETVAFCLADPGDAFL----VP---------TPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEA 188 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~gd~Vl----v~---------~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 188 (483)
++.-+|+..+...+..++.+ .+.+. ++ .+........++.+ |.+++.++.+.. ..--.++|.+
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~al-gipl~~~~~~g~--~~~~~~~l~~ 79 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEAL-GIPLIEIPTSGD--EEDYVEDLKE 79 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHH-T--EEEEEE-----CCCHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHh-CCccEEEEeccCCCCcccccccCHHHHHHHHHHC-CCCEEEEEccCc--cchhhHHHHH
Confidence 45668888888877777655 43221 11 11112233345555 999998887521 1122566666
Q ss_pred HHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEE
Q 011570 189 AYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHL 235 (483)
Q Consensus 189 ~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~i 235 (483)
++++. ++.+++ +|.+.+...+..+-+.|.+.|+-.
T Consensus 80 ~l~~~-----~v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~ 114 (218)
T PF01902_consen 80 ALKEL-----KVEAVV-------FGDIDSEYQRNWVERVCERLGLEA 114 (218)
T ss_dssp HHCTC-------SEEE---------TTS-HHHHHHHHHHHHHCT-EE
T ss_pred HHHHc-----CCCEEE-------ECcCCcHHHHHHHHHHHHHcCCEE
Confidence 66532 466665 799999999999989999998753
No 437
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=48.60 E-value=2.6e+02 Score=27.77 Aligned_cols=108 Identities=14% Similarity=0.096 Sum_probs=59.4
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeE--EEeCCCCcC------hHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHH
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAF--LVPTPYYPG------FDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAY 190 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~V--lv~~P~y~~------~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i 190 (483)
.+-|+..+||-....++..+.-.-|..+ +..++.|.. ....++.+ |+....+.. |.+.+....
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~l-gvd~~~i~~--------d~~~~~~l~ 130 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKL-GFDLHTITI--------NPETFRKLQ 130 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHc-CCCeEEEeC--------CHHHHHHHH
Confidence 4667778888877766533322224333 455666642 22233334 887776653 445554444
Q ss_pred HHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccC
Q 011570 191 EKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFT 247 (483)
Q Consensus 191 ~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~ 247 (483)
... .+ +..+|.... .......+.++|.++|+.+|+..-..+..|+
T Consensus 131 ~~~------~~-----~~~~pc~~c-~~~~~~~l~~~A~~~gi~~Il~G~~~dE~fg 175 (343)
T TIGR03573 131 RAY------FK-----KVGDPEWPQ-DHAIFASVYQVALKFNIPLIIWGENIAEEYG 175 (343)
T ss_pred HHH------Hh-----ccCCCchhh-hhHHHHHHHHHHHHhCCCEEEeCCCHHHhcC
Confidence 321 11 233443332 2334677888999999998887666554443
No 438
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=48.54 E-value=2.2e+02 Score=26.25 Aligned_cols=82 Identities=17% Similarity=0.189 Sum_probs=45.4
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
...++||.|+...=..+...|.+.|-+|++....-..... .++.. |.++..+..|- -|.+.+++.+.....
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 83 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ-GLSAHALAFDV-----TDHDAVRAAIDAFEA 83 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CceEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 3467777665544444556677888888776543222222 22222 55666666553 356777777765544
Q ss_pred cCCceeEEEEe
Q 011570 196 SNIRIKGVLIT 206 (483)
Q Consensus 196 ~~~~~~~i~l~ 206 (483)
...+++.++.+
T Consensus 84 ~~~~~d~li~~ 94 (255)
T PRK07523 84 EIGPIDILVNN 94 (255)
T ss_pred hcCCCCEEEEC
Confidence 33456655543
No 439
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=48.48 E-value=1.2e+02 Score=26.89 Aligned_cols=98 Identities=21% Similarity=0.261 Sum_probs=54.5
Q ss_pred EEEeCChhHHHHHHHHHhcCCCCeE-EEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 122 IVMSGGATGAHETVAFCLADPGDAF-LVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~gd~V-lv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
-++|.|++..=....--|.+.|-.| +..-|.-.+ .+.++.+ |.+++..|.+-. ..+++..++.....+=.+.
T Consensus 12 alvtggasglg~ataerlakqgasv~lldlp~skg-~~vakel-g~~~vf~padvt-----sekdv~aala~ak~kfgrl 84 (260)
T KOG1199|consen 12 ALVTGGASGLGKATAERLAKQGASVALLDLPQSKG-ADVAKEL-GGKVVFTPADVT-----SEKDVRAALAKAKAKFGRL 84 (260)
T ss_pred EEeecCcccccHHHHHHHHhcCceEEEEeCCcccc-hHHHHHh-CCceEEeccccC-----cHHHHHHHHHHHHhhccce
Confidence 3455555544444445567777555 455565544 4567776 999999987632 3456666666554443355
Q ss_pred eEEEEeCC--------CCCCcCCCCHHHHHHHHH
Q 011570 201 KGVLITNP--------SNPLGTFLDRETLKDIVS 226 (483)
Q Consensus 201 ~~i~l~~P--------~NPtG~~~~~~~l~~i~~ 226 (483)
++.+-|-- |---+...+.|+.+++++
T Consensus 85 d~~vncagia~a~ktyn~~k~~~h~ledfqrvid 118 (260)
T KOG1199|consen 85 DALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVID 118 (260)
T ss_pred eeeeeccceeeeeeeeeecccccccHHHhhheee
Confidence 55444421 112344455555655554
No 440
>PRK07109 short chain dehydrogenase; Provisional
Probab=48.19 E-value=2.8e+02 Score=27.24 Aligned_cols=81 Identities=23% Similarity=0.315 Sum_probs=43.9
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
...++||.|+...=..+...|.+.|..|++..-.-..... .++.. |.++..+..|- -|.+.+++++....+
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~-g~~~~~v~~Dv-----~d~~~v~~~~~~~~~ 81 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA-GGEALAVVADV-----ADAEAVQAAADRAEE 81 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc-CCcEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 3456666554433344446677888877765543222222 22232 66777666653 256777777665444
Q ss_pred cCCceeEEEE
Q 011570 196 SNIRIKGVLI 205 (483)
Q Consensus 196 ~~~~~~~i~l 205 (483)
+-.+++.+|.
T Consensus 82 ~~g~iD~lIn 91 (334)
T PRK07109 82 ELGPIDTWVN 91 (334)
T ss_pred HCCCCCEEEE
Confidence 3335665443
No 441
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=47.38 E-value=2.8e+02 Score=26.95 Aligned_cols=107 Identities=12% Similarity=0.159 Sum_probs=63.8
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCC--eEEEeC--CCCcChHHHHhhh-cCcEEEEeecCCCCCcccCHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGD--AFLVPT--PYYPGFDRDLRWR-TGVQLVPVVCDSSNDFKVTMEALEAAYEK 192 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd--~Vlv~~--P~y~~~~~~~~~~-~G~~~~~v~~~~~~~~~~d~~~l~~~i~~ 192 (483)
-..+|++|.|++.-+...+....++|. .|+|.+ |.+.+...+.... .|++..-++ | .++-+...+
T Consensus 161 hsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~---------d-aaVfA~Msr 230 (353)
T KOG1465|consen 161 HSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP---------D-AAVFAMMSR 230 (353)
T ss_pred ccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec---------c-HHHHHHhhh
Confidence 467899999999888888877766653 455553 5555433222211 377765555 2 223333322
Q ss_pred HHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccc
Q 011570 193 AQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEI 240 (483)
Q Consensus 193 ~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Dea 240 (483)
-.|+|+-+..--+-|.+....-...++..|++|..++|+=..
T Consensus 231 ------VnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp 272 (353)
T KOG1465|consen 231 ------VNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAP 272 (353)
T ss_pred ------cceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEecc
Confidence 234555555444445566555567788888889888776443
No 442
>PRK06194 hypothetical protein; Provisional
Probab=47.33 E-value=2.5e+02 Score=26.48 Aligned_cols=82 Identities=20% Similarity=0.150 Sum_probs=43.6
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh--cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR--TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
..++||.|+...=..+...|.+.|..|++..-.-.......... .|.++..+..|- -|.+.+++.+....++.
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDV-----SDAAQVEALADAALERF 81 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 45666665543333445667788888776654322222222211 155666666543 25677777766544433
Q ss_pred CceeEEEEe
Q 011570 198 IRIKGVLIT 206 (483)
Q Consensus 198 ~~~~~i~l~ 206 (483)
.+++.|+.+
T Consensus 82 g~id~vi~~ 90 (287)
T PRK06194 82 GAVHLLFNN 90 (287)
T ss_pred CCCCEEEEC
Confidence 456654443
No 443
>PRK06841 short chain dehydrogenase; Provisional
Probab=47.30 E-value=2.3e+02 Score=26.08 Aligned_cols=83 Identities=20% Similarity=0.155 Sum_probs=42.7
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|..|++........ .......+.++..++.|- -+.+.+++.+........
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLLGGNAKGLVCDV-----SDSQSVEAAVAAVISAFG 88 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhhCCceEEEEecC-----CCHHHHHHHHHHHHHHhC
Confidence 34566665544333444566778888877665433221 112222244444555443 256677776665443333
Q ss_pred ceeEEEEeC
Q 011570 199 RIKGVLITN 207 (483)
Q Consensus 199 ~~~~i~l~~ 207 (483)
++++++.+.
T Consensus 89 ~~d~vi~~a 97 (255)
T PRK06841 89 RIDILVNSA 97 (255)
T ss_pred CCCEEEECC
Confidence 566665543
No 444
>PRK06196 oxidoreductase; Provisional
Probab=47.19 E-value=2.1e+02 Score=27.67 Aligned_cols=81 Identities=21% Similarity=0.236 Sum_probs=39.9
Q ss_pred CCCcEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 118 DPDRIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 118 ~~~~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
+...++||.|+. +|- .+...|...|..|++..-.-...........++.++..++ -|.+.+++.+.+....
T Consensus 25 ~~k~vlITGasg-gIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl-------~d~~~v~~~~~~~~~~ 96 (315)
T PRK06196 25 SGKTAIVTGGYS-GLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDL-------ADLESVRAFAERFLDS 96 (315)
T ss_pred CCCEEEEeCCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccC-------CCHHHHHHHHHHHHhc
Confidence 334566665544 443 3445677788777765433222222222221333333332 2567777777665443
Q ss_pred CCceeEEEEe
Q 011570 197 NIRIKGVLIT 206 (483)
Q Consensus 197 ~~~~~~i~l~ 206 (483)
..++..++.+
T Consensus 97 ~~~iD~li~n 106 (315)
T PRK06196 97 GRRIDILINN 106 (315)
T ss_pred CCCCCEEEEC
Confidence 3456655433
No 445
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=46.86 E-value=2.3e+02 Score=25.85 Aligned_cols=101 Identities=21% Similarity=0.277 Sum_probs=51.2
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
..++||.|+...=..+...|...|..|++..-.-..... .+... +.++..+..|- -+.+.+++.++.....
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 81 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY-GVKVVIATADV-----SDYEEVTAAIEQLKNE 81 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CCeEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 346666554433334445567788777665432211111 12222 55666666553 2567777777654433
Q ss_pred CCceeEEEEeCCCCCCcCC--CCHHHHHHHHH
Q 011570 197 NIRIKGVLITNPSNPLGTF--LDRETLKDIVS 226 (483)
Q Consensus 197 ~~~~~~i~l~~P~NPtG~~--~~~~~l~~i~~ 226 (483)
-.++++|+.+...++.+.. .+.+++++..+
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~ 113 (239)
T PRK07666 82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQ 113 (239)
T ss_pred cCCccEEEEcCccccCCCcccCCHHHHHHHHH
Confidence 3467766655444433322 24444544443
No 446
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=46.04 E-value=40 Score=34.87 Aligned_cols=78 Identities=10% Similarity=0.249 Sum_probs=47.3
Q ss_pred HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce--eEEEE----eCC--CCCCcCCCCHHHHHHHHHHHhh
Q 011570 159 DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI--KGVLI----TNP--SNPLGTFLDRETLKDIVSFINE 230 (483)
Q Consensus 159 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~--~~i~l----~~P--~NPtG~~~~~~~l~~i~~~a~~ 230 (483)
.+... ..++..+.+.++.+|.+.+..+.++-..-...+... ...+. ..| ..+.|..+|.+++++|++.|++
T Consensus 30 ~ma~~-K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~~ 108 (445)
T cd06569 30 QMAAY-KLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAKA 108 (445)
T ss_pred HHHHh-CCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHHH
Confidence 34444 889999998887888887766654332100000000 00011 112 1244668999999999999999
Q ss_pred cCcEEEE
Q 011570 231 KNIHLVC 237 (483)
Q Consensus 231 ~~~~iI~ 237 (483)
+|+-||-
T Consensus 109 rgI~VIP 115 (445)
T cd06569 109 RHIEVIP 115 (445)
T ss_pred cCCEEEE
Confidence 9987663
No 447
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=45.85 E-value=2.3e+02 Score=25.55 Aligned_cols=101 Identities=14% Similarity=0.224 Sum_probs=59.1
Q ss_pred EEEeCChhHHHHHHHHHhcCCCCeEE---EeCCC-CcC----------hHHHHhhhcCcEEEEeecCCCCCcccCHHHHH
Q 011570 122 IVMSGGATGAHETVAFCLADPGDAFL---VPTPY-YPG----------FDRDLRWRTGVQLVPVVCDSSNDFKVTMEALE 187 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~gd~Vl---v~~P~-y~~----------~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~ 187 (483)
++.-+|+.....++..+.- .|..|. +..|. +.. ....++.+ |++...+..+... .--.+.+.
T Consensus 3 ~v~~SGGkDS~~al~~a~~-~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~l-gipl~~i~~~~~~--e~~~~~l~ 78 (194)
T cd01994 3 VALISGGKDSCYALYRALE-EGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAM-GIPLIRIEISGEE--EDEVEDLK 78 (194)
T ss_pred EEEecCCHHHHHHHHHHHH-cCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHc-CCcEEEEeCCCCc--hHHHHHHH
Confidence 4556777777766665543 454332 22222 111 11233444 8888777754211 11135666
Q ss_pred HHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEE
Q 011570 188 AAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHL 235 (483)
Q Consensus 188 ~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~i 235 (483)
+.+++..++ ...+|+ +|.+.+..++..+-+.|.+.|+..
T Consensus 79 ~~l~~~~~~--g~~~vv-------~G~i~sd~~~~~~e~~~~~~gl~~ 117 (194)
T cd01994 79 ELLRKLKEE--GVDAVV-------FGAILSEYQRTRVERVCERLGLEP 117 (194)
T ss_pred HHHHHHHHc--CCCEEE-------ECccccHHHHHHHHHHHHHcCCEE
Confidence 666665433 355555 699999999999999999998753
No 448
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=45.84 E-value=26 Score=37.68 Aligned_cols=34 Identities=18% Similarity=0.241 Sum_probs=28.8
Q ss_pred CCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC
Q 011570 211 PLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT 244 (483)
Q Consensus 211 PtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~ 244 (483)
||-..=++++++++++.|+++||-||+|=+|..+
T Consensus 206 p~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF 239 (628)
T COG0296 206 PTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHF 239 (628)
T ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcC
Confidence 3334447899999999999999999999999873
No 449
>PRK08589 short chain dehydrogenase; Validated
Probab=45.66 E-value=2.6e+02 Score=26.24 Aligned_cols=82 Identities=17% Similarity=0.166 Sum_probs=43.9
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh--cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR--TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
..++||.|+...=..+...|.+.|..|++.... .......... .+.++..+..|- -|.+.+++++.+..++.
T Consensus 7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDI-----SDEQQVKDFASEIKEQF 80 (272)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeec-----CCHHHHHHHHHHHHHHc
Confidence 356666555433344456677889888877655 4333322221 255566666543 25666766666554433
Q ss_pred CceeEEEEeCC
Q 011570 198 IRIKGVLITNP 208 (483)
Q Consensus 198 ~~~~~i~l~~P 208 (483)
.++..+ ++|.
T Consensus 81 g~id~l-i~~A 90 (272)
T PRK08589 81 GRVDVL-FNNA 90 (272)
T ss_pred CCcCEE-EECC
Confidence 356644 4444
No 450
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=45.11 E-value=16 Score=36.23 Aligned_cols=65 Identities=15% Similarity=0.439 Sum_probs=40.7
Q ss_pred HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEE
Q 011570 160 LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVC 237 (483)
Q Consensus 160 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~ 237 (483)
+... +.++..+.+.++.+|.+....+.+.-.. + . ..++.+ |..++.+++++|++.|+++|+-||-
T Consensus 27 ma~~-k~N~lhlhl~D~~~~~~~~~~~p~l~~~----g-a------~~~~~~-~~~yT~~di~~lv~yA~~~gI~VIP 91 (351)
T PF00728_consen 27 MAYY-KLNVLHLHLSDDQGFRLESKSYPELTEK----G-A------YRPSDA-GGYYTKEDIRELVAYAKERGIEVIP 91 (351)
T ss_dssp HHHT-T-SEEEEEEESSTCB-BEBSTSTHHHHT----T-T------ESTTCT-ESEBEHHHHHHHHHHHHHTT-EEEE
T ss_pred HHHc-CCcEEEEEEecCCCCccccCCCcccccc----C-c------cccccc-cccCCHHHHHHHHHHHHHcCCceee
Confidence 4443 8888888887777787766555443211 0 0 001113 4499999999999999999987764
No 451
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=44.91 E-value=64 Score=30.28 Aligned_cols=55 Identities=20% Similarity=0.382 Sum_probs=38.7
Q ss_pred cCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 181 VTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 181 ~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
++.+.+.+.++...+ +-++++|. +|.+.+.+.++.|.++.++++..+|+|=+.++
T Consensus 43 ~~~~~~~~ql~~~~~-~~~~~aik-------iG~l~~~~~v~~i~~~l~~~~~~vV~DPVm~~ 97 (246)
T PF08543_consen 43 VDSEMIKAQLDALLE-DMKFDAIK-------IGYLGSAEQVEIIADFLKKPKIPVVLDPVMGD 97 (246)
T ss_dssp --HHHHHHHHHHHHH-TSC-SEEE-------E-S-SSHHHHHHHHHHHHHTTTEEEEE---EE
T ss_pred CCHHHHHHHHHHhcc-cccccEEE-------EcccCCchhhhhHHHHHhccCCCEEEeccccc
Confidence 567788888877654 45778877 69999999999999999888999999988763
No 452
>PRK05693 short chain dehydrogenase; Provisional
Probab=44.22 E-value=2.8e+02 Score=26.05 Aligned_cols=77 Identities=13% Similarity=0.146 Sum_probs=39.6
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
.++||.|+...=..+...|.+.|..|++....-..... +... +...+.+++. |.+.+++.+....+...++
T Consensus 3 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~-~~~~~~~Dl~-------~~~~~~~~~~~~~~~~~~i 73 (274)
T PRK05693 3 VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA-LAAA-GFTAVQLDVN-------DGAALARLAEELEAEHGGL 73 (274)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHC-CCeEEEeeCC-------CHHHHHHHHHHHHHhcCCC
Confidence 35565554433334445667788888776544322222 2222 5444444332 4567777666554444456
Q ss_pred eEEEEe
Q 011570 201 KGVLIT 206 (483)
Q Consensus 201 ~~i~l~ 206 (483)
..++.+
T Consensus 74 d~vi~~ 79 (274)
T PRK05693 74 DVLINN 79 (274)
T ss_pred CEEEEC
Confidence 655544
No 453
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=43.96 E-value=2.6e+02 Score=25.63 Aligned_cols=83 Identities=18% Similarity=0.225 Sum_probs=45.3
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCC-cChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYY-PGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y-~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
....++||.|+...=..+...|.+.|..|++....- ......+... +.++..++.|- -+.+.+++.++...+.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEAL-GRRFLSLTADL-----SDIEAIKALVDSAVEE 77 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 345677776655444445566778898777665322 1112222332 55566666543 2567777766654443
Q ss_pred CCceeEEEEe
Q 011570 197 NIRIKGVLIT 206 (483)
Q Consensus 197 ~~~~~~i~l~ 206 (483)
..++..++.+
T Consensus 78 ~~~~d~li~~ 87 (248)
T TIGR01832 78 FGHIDILVNN 87 (248)
T ss_pred cCCCCEEEEC
Confidence 3456655533
No 454
>PRK05867 short chain dehydrogenase; Provisional
Probab=43.73 E-value=2.7e+02 Score=25.74 Aligned_cols=83 Identities=17% Similarity=0.296 Sum_probs=43.9
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh--cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR--TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
...++||.|+...=..+...|.+.|.+|++..-.-.......... .+.++..+..|- -|.+.+++++.+..++
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDV-----SQHQQVTSMLDQVTAE 83 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 345666666554334444667788888877654332222222111 255666666543 3567777766654443
Q ss_pred CCceeEEEEe
Q 011570 197 NIRIKGVLIT 206 (483)
Q Consensus 197 ~~~~~~i~l~ 206 (483)
-.+++.++.+
T Consensus 84 ~g~id~lv~~ 93 (253)
T PRK05867 84 LGGIDIAVCN 93 (253)
T ss_pred hCCCCEEEEC
Confidence 3356655443
No 455
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=43.69 E-value=98 Score=28.82 Aligned_cols=53 Identities=15% Similarity=0.223 Sum_probs=36.1
Q ss_pred CCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 176 SNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 176 ~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
.-+|-+...+|.+++-+. ++.+.+- +..+-+..|+++|.+|++-+++-..-+.
T Consensus 110 RIdWL~HfSALLSAvGE~-----NVpLA~~----------VNI~GvHNil~vAa~~kL~iFVPSTIGA 162 (366)
T KOG2774|consen 110 RIDWLVHFSALLSAVGET-----NVPLALQ----------VNIRGVHNILQVAAKHKLKVFVPSTIGA 162 (366)
T ss_pred ccceeeeHHHHHHHhccc-----CCceeee----------ecchhhhHHHHHHHHcCeeEeecccccc
Confidence 346777888888877541 3333322 2233367889999999999999888765
No 456
>COG4098 comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair]
Probab=43.39 E-value=2.1e+02 Score=28.49 Aligned_cols=34 Identities=15% Similarity=0.037 Sum_probs=28.7
Q ss_pred EEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC
Q 011570 122 IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPG 155 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~ 155 (483)
-+-++|-+|.|+..+...++.|+.|.+.+|--.-
T Consensus 123 AV~GaGKTEMif~~i~~al~~G~~vciASPRvDV 156 (441)
T COG4098 123 AVTGAGKTEMIFQGIEQALNQGGRVCIASPRVDV 156 (441)
T ss_pred EecCCCchhhhHHHHHHHHhcCCeEEEecCcccc
Confidence 4557888999999999999999999999996543
No 457
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=43.35 E-value=52 Score=27.35 Aligned_cols=59 Identities=25% Similarity=0.469 Sum_probs=44.3
Q ss_pred CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEE--eCC---CCCCcCCCCHHHHHHHHHHHhhcCc
Q 011570 165 GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLI--TNP---SNPLGTFLDRETLKDIVSFINEKNI 233 (483)
Q Consensus 165 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l--~~P---~NPtG~~~~~~~l~~i~~~a~~~~~ 233 (483)
+++++.+|.. ..+|+..+..++.+ ..+.|++ |.| |...|......++..+-++..+.|+
T Consensus 28 ~vriIrvpC~----Grv~~~~il~Af~~------GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~Gi 91 (124)
T PF02662_consen 28 NVRIIRVPCS----GRVDPEFILRAFEK------GADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELGI 91 (124)
T ss_pred CeEEEEccCC----CccCHHHHHHHHHc------CCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcCC
Confidence 4677888764 26899999999875 4566666 444 5689999988888888887777664
No 458
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=43.32 E-value=2.6e+02 Score=27.24 Aligned_cols=110 Identities=19% Similarity=0.240 Sum_probs=59.7
Q ss_pred cEEEeCChhHHHHHHHHHhcCC--CC-eEEEeCCCCcChHHHHhhhcC-cEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 121 RIVMSGGATGAHETVAFCLADP--GD-AFLVPTPYYPGFDRDLRWRTG-VQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~--gd-~Vlv~~P~y~~~~~~~~~~~G-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
.+++|.|+.-.=...+..+++. .+ .+.+..-+|.+-...++...+ -++..+..|- -|.+.+.+.+.+.
T Consensus 2 ~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI-----~D~~~v~~~~~~~--- 73 (340)
T COG1088 2 KILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDI-----CDRELVDRLFKEY--- 73 (340)
T ss_pred cEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccc-----cCHHHHHHHHHhc---
Confidence 4677777553323333444332 24 356777899887776654423 2444444331 2567777777652
Q ss_pred CCceeEEE-----------EeCC-----CCCCcCCCCHHHHHHHHHHHhhcC-----cEEEEccccccCccC
Q 011570 197 NIRIKGVL-----------ITNP-----SNPLGTFLDRETLKDIVSFINEKN-----IHLVCDEIYAATVFT 247 (483)
Q Consensus 197 ~~~~~~i~-----------l~~P-----~NPtG~~~~~~~l~~i~~~a~~~~-----~~iI~Deay~~~~~~ 247 (483)
++.+|+ +..| .|-.|+ ..|++.++++. .+|=.||+|+++..+
T Consensus 74 --~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT-------~~LLEaar~~~~~frf~HISTDEVYG~l~~~ 136 (340)
T COG1088 74 --QPDAVVHFAAESHVDRSIDGPAPFIQTNVVGT-------YTLLEAARKYWGKFRFHHISTDEVYGDLGLD 136 (340)
T ss_pred --CCCeEEEechhccccccccChhhhhhcchHHH-------HHHHHHHHHhcccceEEEeccccccccccCC
Confidence 344332 1222 122232 35667777776 245679999987655
No 459
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=43.32 E-value=1.5e+02 Score=27.65 Aligned_cols=83 Identities=12% Similarity=0.116 Sum_probs=42.6
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..++.|- -|.+.+++.+.+..++..
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g 79 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-GDHVLVVEGDV-----TSYADNQRAVDQTVDAFG 79 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCcceEEEccC-----CCHHHHHHHHHHHHHhcC
Confidence 345666655543333455667788877776654322222323332 44444555442 256667666665544434
Q ss_pred ceeEEEEeCC
Q 011570 199 RIKGVLITNP 208 (483)
Q Consensus 199 ~~~~i~l~~P 208 (483)
++..++ +|.
T Consensus 80 ~id~li-~~a 88 (263)
T PRK06200 80 KLDCFV-GNA 88 (263)
T ss_pred CCCEEE-ECC
Confidence 566444 443
No 460
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=43.27 E-value=1.6e+02 Score=27.33 Aligned_cols=84 Identities=20% Similarity=0.269 Sum_probs=43.8
Q ss_pred CCCcEEEeCChh-HHH-HHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 118 DPDRIVMSGGAT-GAH-ETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 118 ~~~~i~it~G~~-~al-~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
....++||.|++ .+| ..+...|.+.|.+|++.... ......++...+.++..+.+|- -|.+++++.++...+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 79 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQKLVDEEDLLVECDV-----ASDESIERAFATIKE 79 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHhhccCceeEEeCCC-----CCHHHHHHHHHHHHH
Confidence 344677777662 333 34446677889888876433 2222223222233444555542 256777777665544
Q ss_pred cCCceeEEEEeCC
Q 011570 196 SNIRIKGVLITNP 208 (483)
Q Consensus 196 ~~~~~~~i~l~~P 208 (483)
+-.+...+ ++|.
T Consensus 80 ~~g~iD~l-v~nA 91 (252)
T PRK06079 80 RVGKIDGI-VHAI 91 (252)
T ss_pred HhCCCCEE-EEcc
Confidence 33356654 4444
No 461
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=43.19 E-value=2.6e+02 Score=26.91 Aligned_cols=22 Identities=9% Similarity=0.102 Sum_probs=13.4
Q ss_pred CHHHHHHHHHHHHHHHHHhhhc
Q 011570 419 DDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 419 ~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
.++.++.+..++.+++++..+.
T Consensus 233 ~~~al~~~~~~V~evl~~T~~~ 254 (281)
T COG2240 233 LTQALERATAAVYEVLQETQKL 254 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 3455667777777777655433
No 462
>PRK07890 short chain dehydrogenase; Provisional
Probab=42.60 E-value=2.3e+02 Score=26.08 Aligned_cols=82 Identities=18% Similarity=0.138 Sum_probs=43.9
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh--cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR--TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
..++||.|++..=..+...|...|..|++..-.-.......... .+.++..+..|- -|.+.+++.+.+..++-
T Consensus 6 k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 6 KVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDI-----TDEDQCANLVALALERF 80 (258)
T ss_pred CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCC-----CCHHHHHHHHHHHHHHc
Confidence 45667666554444555667788988887654322222222211 145555555542 25677777766543333
Q ss_pred CceeEEEEe
Q 011570 198 IRIKGVLIT 206 (483)
Q Consensus 198 ~~~~~i~l~ 206 (483)
.+++.|+.+
T Consensus 81 g~~d~vi~~ 89 (258)
T PRK07890 81 GRVDALVNN 89 (258)
T ss_pred CCccEEEEC
Confidence 356655544
No 463
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=42.60 E-value=51 Score=32.51 Aligned_cols=26 Identities=8% Similarity=0.560 Sum_probs=23.0
Q ss_pred CCcCCCCHHHHHHHHHHHhhcCcEEE
Q 011570 211 PLGTFLDRETLKDIVSFINEKNIHLV 236 (483)
Q Consensus 211 PtG~~~~~~~l~~i~~~a~~~~~~iI 236 (483)
+.+..+|.+++++|++.|+++|+-||
T Consensus 74 ~~~~~YT~~di~eiv~yA~~rgI~vI 99 (326)
T cd06564 74 ANDGYYTKEEFKELIAYAKDRGVNII 99 (326)
T ss_pred CCCCcccHHHHHHHHHHHHHcCCeEe
Confidence 45778999999999999999998765
No 464
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=42.38 E-value=99 Score=22.37 Aligned_cols=34 Identities=15% Similarity=0.334 Sum_probs=23.9
Q ss_pred eEEEEeCCCCCCcCCCC-HHHHHHHHHHHhhcCcEEEEc
Q 011570 201 KGVLITNPSNPLGTFLD-RETLKDIVSFINEKNIHLVCD 238 (483)
Q Consensus 201 ~~i~l~~P~NPtG~~~~-~~~l~~i~~~a~~~~~~iI~D 238 (483)
..+++.+|.-. ++ .+++++|.++..+-|.+||.|
T Consensus 36 ~tll~i~~~~~----~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 36 GTLLVIGPDLR----LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred CEEEEEeCCCC----CCchHHHHHHHHHHHcCCEEEEeC
Confidence 34566666522 34 588999999998778777765
No 465
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=42.13 E-value=2.8e+02 Score=25.44 Aligned_cols=81 Identities=15% Similarity=0.215 Sum_probs=42.6
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEe-CCCCcCh---HHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVP-TPYYPGF---DRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~P~y~~~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
.++||.|+...=..+...|.+.|..|++. ...=... ...++.. +.++..+..|- -|.+.+.+++++..+.
T Consensus 6 ~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 6 VALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL-GRKALAVKANV-----GDVEKIKEMFAQIDEE 79 (250)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 46666655443344456677888776652 2111111 1122333 66676666653 2567777777655443
Q ss_pred CCceeEEEEeC
Q 011570 197 NIRIKGVLITN 207 (483)
Q Consensus 197 ~~~~~~i~l~~ 207 (483)
-.+++.|+.+.
T Consensus 80 ~~~id~vi~~a 90 (250)
T PRK08063 80 FGRLDVFVNNA 90 (250)
T ss_pred cCCCCEEEECC
Confidence 33566555443
No 466
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=41.43 E-value=3.1e+02 Score=25.77 Aligned_cols=83 Identities=18% Similarity=0.121 Sum_probs=44.3
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
....++||.|+...=..+...|.+.|..|++....-...... +... |.++..+..|- -|.+.+.+.+....
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 82 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA-GGEALAVKADV-----LDKESLEQARQQIL 82 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCC-----CCHHHHHHHHHHHH
Confidence 334566666555433555566778888877765432222222 2222 55666666553 25566666665543
Q ss_pred hcCCceeEEEEe
Q 011570 195 ESNIRIKGVLIT 206 (483)
Q Consensus 195 ~~~~~~~~i~l~ 206 (483)
..-.++..++.+
T Consensus 83 ~~~g~id~li~~ 94 (278)
T PRK08277 83 EDFGPCDILING 94 (278)
T ss_pred HHcCCCCEEEEC
Confidence 333356655543
No 467
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=41.34 E-value=3.5e+02 Score=26.36 Aligned_cols=108 Identities=19% Similarity=0.247 Sum_probs=62.7
Q ss_pred cCCCcEEEeCChhHHHHHHHHHhcCCCC--eEEEe--CCCCcChH--HHHhhhcCcEEEEeecCCCCCcccCHHHHHHHH
Q 011570 117 FDPDRIVMSGGATGAHETVAFCLADPGD--AFLVP--TPYYPGFD--RDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAY 190 (483)
Q Consensus 117 ~~~~~i~it~G~~~al~~~~~~l~~~gd--~Vlv~--~P~y~~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i 190 (483)
+...++++|.|.+.+...++....+.|. +|++. .|.+.+.. ..++.. |.++..++- .++-..+
T Consensus 117 i~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~-gI~~~~I~D----------sa~~~~~ 185 (301)
T COG1184 117 IHDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQS-GIPVTVIVD----------SAVGAFM 185 (301)
T ss_pred ccCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHc-CCceEEEec----------hHHHHHH
Confidence 4567899999999888888888777775 55555 36665433 234443 877777651 1222222
Q ss_pred HHHHhcCCceeEEEEeC-CCCCCcCCCCHHHHHHHHHHHhhcCcEEE-Eccccc
Q 011570 191 EKAQESNIRIKGVLITN-PSNPLGTFLDRETLKDIVSFINEKNIHLV-CDEIYA 242 (483)
Q Consensus 191 ~~~~~~~~~~~~i~l~~-P~NPtG~~~~~~~l~~i~~~a~~~~~~iI-~Deay~ 242 (483)
. ++..|++.. -----|.++++-=---|+..|++.+.+++ +=|.|-
T Consensus 186 ~-------~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~aesyK 232 (301)
T COG1184 186 S-------RVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVVAESYK 232 (301)
T ss_pred H-------hCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEEeeeec
Confidence 2 344454432 21122444444434566777788877654 445553
No 468
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=40.97 E-value=95 Score=31.36 Aligned_cols=105 Identities=15% Similarity=0.162 Sum_probs=58.1
Q ss_pred eCChhHHHHHHHHHhcCC-CCeEEEeCCCCcChHHHHhhh-cCcEEEEeecCCCCCcc-cCHHHHHHHHHHHHhcCCcee
Q 011570 125 SGGATGAHETVAFCLADP-GDAFLVPTPYYPGFDRDLRWR-TGVQLVPVVCDSSNDFK-VTMEALEAAYEKAQESNIRIK 201 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~-gd~Vlv~~P~y~~~~~~~~~~-~G~~~~~v~~~~~~~~~-~d~~~l~~~i~~~~~~~~~~~ 201 (483)
..|-.++=..+...+-.. .+.-++..++.+..... +.. .+-+++.++ .+..|. .+.+.|.+.+.+. -+..+
T Consensus 72 vvG~Deag~~L~~~l~~~~i~~~l~~~~~r~T~~K~-Rv~s~nQQllRvD--~Ee~~~~~~~~~ll~~~~~~---l~~~~ 145 (467)
T COG2870 72 VVGKDEAGKALIELLKANGIDSDLLRDKNRPTIVKL-RVLSRNQQLLRLD--FEEKFPIEDENKLLEKIKNA---LKSFD 145 (467)
T ss_pred eeccchhHHHHHHHHHhcCcccceEeecCCCceeee-eeecccceEEEec--ccccCcchhHHHHHHHHHHH---hhcCC
Confidence 356555555555444322 24445556655443221 111 133444444 333333 3344444444432 23678
Q ss_pred EEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccc
Q 011570 202 GVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEI 240 (483)
Q Consensus 202 ~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Dea 240 (483)
+++++.-+ -|..-+ .+.++++|++.|++|++|-=
T Consensus 146 ~vVLSDY~--KG~L~~---~q~~I~~ar~~~~pVLvDPK 179 (467)
T COG2870 146 ALVLSDYA--KGVLTN---VQKMIDLAREAGIPVLVDPK 179 (467)
T ss_pred EEEEeccc--cccchh---HHHHHHHHHHcCCcEEECCC
Confidence 88888654 355555 88999999999999999953
No 469
>PRK06484 short chain dehydrogenase; Validated
Probab=40.88 E-value=2.8e+02 Score=29.02 Aligned_cols=79 Identities=15% Similarity=0.169 Sum_probs=44.0
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
.++||.|+...=..+...|.+.|..|++..-.-.......... |.++..+..|- -|.+.+++++....+...++
T Consensus 7 ~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 7 VVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-GPDHHALAMDV-----SDEAQIREGFEQLHREFGRI 80 (520)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEecc-----CCHHHHHHHHHHHHHHhCCC
Confidence 4556555544334455667788988776643333333334443 66666666543 25677777776654443456
Q ss_pred eEEEE
Q 011570 201 KGVLI 205 (483)
Q Consensus 201 ~~i~l 205 (483)
..+|.
T Consensus 81 D~li~ 85 (520)
T PRK06484 81 DVLVN 85 (520)
T ss_pred CEEEE
Confidence 65443
No 470
>PRK08643 acetoin reductase; Validated
Probab=40.85 E-value=2.9e+02 Score=25.42 Aligned_cols=81 Identities=15% Similarity=0.092 Sum_probs=42.6
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
.++||.|+...=..+...|.+.|.+|++..-.-...... +... +.++..+..|- -|.+.+++.+.+..++.
T Consensus 4 ~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~ 77 (256)
T PRK08643 4 VALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD-GGKAIAVKADV-----SDRDQVFAAVRQVVDTF 77 (256)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 355555444333344466777887776654322111111 2222 55666666553 25677777776655444
Q ss_pred CceeEEEEeC
Q 011570 198 IRIKGVLITN 207 (483)
Q Consensus 198 ~~~~~i~l~~ 207 (483)
.+++.++.+.
T Consensus 78 ~~id~vi~~a 87 (256)
T PRK08643 78 GDLNVVVNNA 87 (256)
T ss_pred CCCCEEEECC
Confidence 4677666554
No 471
>PRK05876 short chain dehydrogenase; Provisional
Probab=40.85 E-value=3.2e+02 Score=25.82 Aligned_cols=83 Identities=20% Similarity=0.278 Sum_probs=44.7
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh--cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR--TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
..++||.|++..=..+...|...|..|++..-.-.......... .|.++..+..|- -|.+.+++.+.+..+..
T Consensus 7 k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDV-----RHREEVTHLADEAFRLL 81 (275)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCC-----CCHHHHHHHHHHHHHHc
Confidence 45666666554444555667788887776543322222222211 255666666543 25677777776554443
Q ss_pred CceeEEEEeCC
Q 011570 198 IRIKGVLITNP 208 (483)
Q Consensus 198 ~~~~~i~l~~P 208 (483)
.++.++ ++|.
T Consensus 82 g~id~l-i~nA 91 (275)
T PRK05876 82 GHVDVV-FSNA 91 (275)
T ss_pred CCCCEE-EECC
Confidence 456644 4444
No 472
>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed
Probab=40.75 E-value=1.9e+02 Score=27.67 Aligned_cols=56 Identities=13% Similarity=0.249 Sum_probs=40.4
Q ss_pred cCHHHHHHHHHHHHhcC--CceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhh-----cCcEEEEcccccc
Q 011570 181 VTMEALEAAYEKAQESN--IRIKGVLITNPSNPLGTFLDRETLKDIVSFINE-----KNIHLVCDEIYAA 243 (483)
Q Consensus 181 ~d~~~l~~~i~~~~~~~--~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~-----~~~~iI~Deay~~ 243 (483)
++.+.+++.++.+...+ .++++|. +|.+.+.+..+.++++.++ .+..+|+|=+..+
T Consensus 68 ~~~~~i~~~l~~~~~~~~l~~~d~i~-------~G~l~s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm~d 130 (281)
T PRK08176 68 IPDEWFSGYLRALQERDALRQLRAVT-------TGYMGSASQIKILAEWLTALRADHPDLLIMVDPVIGD 130 (281)
T ss_pred CCHHHHHHHHHHHHhcCccccCCEEE-------ECCCCCHHHHHHHHHHHHHHHHHCCCCcEEeCCcccc
Confidence 45677777777654433 1567776 6999999989999988876 3677888888653
No 473
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=40.65 E-value=1.5e+02 Score=27.10 Aligned_cols=90 Identities=17% Similarity=0.269 Sum_probs=55.3
Q ss_pred cCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCC-cChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 117 FDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYY-PGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 117 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y-~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
++...|++..||..|...+ ..|++.|..|.+-.|.. +.+....... +...+. + .++.+.+.
T Consensus 10 l~~k~VlvvGgG~va~rKa-~~ll~~ga~v~Vvs~~~~~el~~~~~~~-~i~~~~------~--~~~~~~~~-------- 71 (210)
T COG1648 10 LEGKKVLVVGGGSVALRKA-RLLLKAGADVTVVSPEFEPELKALIEEG-KIKWIE------R--EFDAEDLD-------- 71 (210)
T ss_pred cCCCEEEEECCCHHHHHHH-HHHHhcCCEEEEEcCCccHHHHHHHHhc-Ccchhh------c--ccChhhhc--------
Confidence 5566899999999998877 56778899999999988 3333333321 311111 1 13444432
Q ss_pred cCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEE
Q 011570 196 SNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHL 235 (483)
Q Consensus 196 ~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~i 235 (483)
+..+|+.+.. | .+.=++|.+.|+++++++
T Consensus 72 ---~~~lviaAt~-d-------~~ln~~i~~~a~~~~i~v 100 (210)
T COG1648 72 ---DAFLVIAATD-D-------EELNERIAKAARERRILV 100 (210)
T ss_pred ---CceEEEEeCC-C-------HHHHHHHHHHHHHhCCce
Confidence 2345555422 2 334588999999988654
No 474
>PRK06482 short chain dehydrogenase; Provisional
Probab=40.62 E-value=3.1e+02 Score=25.66 Aligned_cols=80 Identities=19% Similarity=0.137 Sum_probs=40.8
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
.++||.|+...=..+...|.+.|..|++..-............ +.++..+..|- -|.+.+++.+.+..+...++
T Consensus 4 ~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 4 TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-GDRLWVLQLDV-----TDSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCceEEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 4666655443333445667788888877654432222222222 33444444432 25667777666543333356
Q ss_pred eEEEEe
Q 011570 201 KGVLIT 206 (483)
Q Consensus 201 ~~i~l~ 206 (483)
..||.+
T Consensus 78 d~vi~~ 83 (276)
T PRK06482 78 DVVVSN 83 (276)
T ss_pred CEEEEC
Confidence 655544
No 475
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=40.31 E-value=1.5e+02 Score=28.29 Aligned_cols=57 Identities=19% Similarity=0.207 Sum_probs=40.1
Q ss_pred EeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc
Q 011570 170 PVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK 231 (483)
Q Consensus 170 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~ 231 (483)
..|+++ +..+|.+.+.+.++...+. .++.|+++ -+.=-+..++.+|++++++.+.+.
T Consensus 9 ~TPf~~--dg~iD~~~~~~~i~~l~~~--Gv~gl~v~-GstGE~~~lt~~Er~~l~~~~~~~ 65 (284)
T cd00950 9 VTPFKD--DGSVDFDALERLIEFQIEN--GTDGLVVC-GTTGESPTLSDEEHEAVIEAVVEA 65 (284)
T ss_pred eCCcCC--CCCcCHHHHHHHHHHHHHc--CCCEEEEC-CCCcchhhCCHHHHHHHHHHHHHH
Confidence 344444 4579999999998876554 45666655 333345678999999999988765
No 476
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=40.18 E-value=58 Score=34.08 Aligned_cols=27 Identities=19% Similarity=0.374 Sum_probs=25.0
Q ss_pred CHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 217 DRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 217 ~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
+.++++++++.|+++|+.||.|-+.-.
T Consensus 79 t~~dl~~Li~~~H~~Gi~vi~D~V~NH 105 (479)
T PRK09441 79 TKEELLNAIDALHENGIKVYADVVLNH 105 (479)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccc
Confidence 688999999999999999999999865
No 477
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=39.95 E-value=1.9e+02 Score=27.03 Aligned_cols=83 Identities=18% Similarity=0.218 Sum_probs=41.3
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|.+|++..-.-.......... +.++..+..|- -|.+.+.+++.+..++-.
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g 78 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH-GDAVVGVEGDV-----RSLDDHKEAVARCVAAFG 78 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc-CCceEEEEecc-----CCHHHHHHHHHHHHHHhC
Confidence 345666655443333344667788988887643322222222222 44555555442 245666666655433333
Q ss_pred ceeEEEEeCC
Q 011570 199 RIKGVLITNP 208 (483)
Q Consensus 199 ~~~~i~l~~P 208 (483)
+++.+ ++|.
T Consensus 79 ~id~l-i~~A 87 (262)
T TIGR03325 79 KIDCL-IPNA 87 (262)
T ss_pred CCCEE-EECC
Confidence 55644 4443
No 478
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=39.91 E-value=2.8e+02 Score=26.53 Aligned_cols=88 Identities=17% Similarity=0.079 Sum_probs=48.0
Q ss_pred HHhcCCCCeEE-EeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC
Q 011570 137 FCLADPGDAFL-VPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTF 215 (483)
Q Consensus 137 ~~l~~~gd~Vl-v~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~ 215 (483)
..|.+.|-.|. +....-......++.. |.+++.++-. .++.-|.+++.+.+++. ++.+|++.+. -
T Consensus 25 ~~l~~~g~~v~f~~~~~~~~~~~~i~~~-g~~v~~~~~~--~~~~~d~~~~~~~l~~~-----~~d~vV~D~y------~ 90 (279)
T TIGR03590 25 RALHAQGAEVAFACKPLPGDLIDLLLSA-GFPVYELPDE--SSRYDDALELINLLEEE-----KFDILIVDHY------G 90 (279)
T ss_pred HHHHHCCCEEEEEeCCCCHHHHHHHHHc-CCeEEEecCC--CchhhhHHHHHHHHHhc-----CCCEEEEcCC------C
Confidence 33445564443 3333222234555665 8888877633 23455777788887753 6678888766 3
Q ss_pred CCHHHHHHHHHHHhhcCcEEEEcccc
Q 011570 216 LDRETLKDIVSFINEKNIHLVCDEIY 241 (483)
Q Consensus 216 ~~~~~l~~i~~~a~~~~~~iI~Deay 241 (483)
++.+..+.+-.. .-.++++||-.
T Consensus 91 ~~~~~~~~~k~~---~~~l~~iDD~~ 113 (279)
T TIGR03590 91 LDADWEKLIKEF---GRKILVIDDLA 113 (279)
T ss_pred CCHHHHHHHHHh---CCeEEEEecCC
Confidence 454434333321 22456777653
No 479
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=39.90 E-value=1.6e+02 Score=28.38 Aligned_cols=56 Identities=14% Similarity=0.176 Sum_probs=40.0
Q ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc
Q 011570 171 VVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK 231 (483)
Q Consensus 171 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~ 231 (483)
-|.++ +..+|.+.+++.++...+. .++.|+++ -++=-+..++.+|+.++++.+.+.
T Consensus 11 TPf~~--dg~iD~~~l~~~i~~l~~~--Gv~gi~~~-Gs~GE~~~ls~~Er~~~~~~~~~~ 66 (292)
T PRK03170 11 TPFKE--DGSVDFAALRKLVDYLIAN--GTDGLVVV-GTTGESPTLTHEEHEELIRAVVEA 66 (292)
T ss_pred CCcCC--CCCcCHHHHHHHHHHHHHc--CCCEEEEC-CcCCccccCCHHHHHHHHHHHHHH
Confidence 34444 4579999999988876554 46676653 455556788999999999877663
No 480
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=39.87 E-value=3.1e+02 Score=25.38 Aligned_cols=82 Identities=23% Similarity=0.275 Sum_probs=44.3
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
....++||.|+...=..+...|.+.|..|++..-. ..... .+... +.++..++.|- -|.+.+++.+.+..
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~i~~~~~~~~ 86 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE-GRKVTFVQVDL-----TKPESAEKVVKEAL 86 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc-CCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 34456666665544445556677889877665443 22222 22222 55555565543 24666766666554
Q ss_pred hcCCceeEEEEe
Q 011570 195 ESNIRIKGVLIT 206 (483)
Q Consensus 195 ~~~~~~~~i~l~ 206 (483)
....+++.++.+
T Consensus 87 ~~~g~id~li~~ 98 (258)
T PRK06935 87 EEFGKIDILVNN 98 (258)
T ss_pred HHcCCCCEEEEC
Confidence 443456765544
No 481
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=39.50 E-value=2.5e+02 Score=29.15 Aligned_cols=132 Identities=15% Similarity=0.201 Sum_probs=74.5
Q ss_pred CCcHHHHHHHHHHHHhhhCCC---------CCcCCCcEEEeCChhHHHHHHHHHhcCCC--CeEE-Ee-CCCCcChH--H
Q 011570 94 HGLPEFRNAVAKFMGKVRGNR---------ITFDPDRIVMSGGATGAHETVAFCLADPG--DAFL-VP-TPYYPGFD--R 158 (483)
Q Consensus 94 ~g~~~Lr~~ia~~~~~~~g~~---------~~~~~~~i~it~G~~~al~~~~~~l~~~g--d~Vl-v~-~P~y~~~~--~ 158 (483)
.+-.+|.+.|-+|+....... -.+....+++|-|++..+..++.-..+.| -+|+ |. .|.+-+-. .
T Consensus 325 eaKe~L~~~I~~~i~eki~~A~qaI~q~a~~KI~dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~lr 404 (556)
T KOG1467|consen 325 EAKEELQSDIDRFIAEKIILADQAISQHAVTKIQDGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKLLR 404 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHHHH
Confidence 344556666555554332100 12456789999999988888876554433 2333 43 35554322 2
Q ss_pred HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEE-E
Q 011570 159 DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLV-C 237 (483)
Q Consensus 159 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI-~ 237 (483)
.+.. .|+++.++-++. ++ .+ ..+ -+++++=++.----|.+|++.--..++-.|+.+|++|| +
T Consensus 405 ~Lv~-~GinctYv~I~a-----~s--yi---m~e------vtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVC 467 (556)
T KOG1467|consen 405 RLVD-RGINCTYVLINA-----AS--YI---MLE------VTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVC 467 (556)
T ss_pred HHHH-cCCCeEEEEehh-----HH--HH---HHh------cceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEE
Confidence 2333 388887776542 11 11 111 34444444442233999998777777778888998755 5
Q ss_pred ccccc
Q 011570 238 DEIYA 242 (483)
Q Consensus 238 Deay~ 242 (483)
=|+|-
T Consensus 468 CE~yK 472 (556)
T KOG1467|consen 468 CEAYK 472 (556)
T ss_pred echhh
Confidence 66774
No 482
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=39.48 E-value=3.1e+02 Score=25.22 Aligned_cols=99 Identities=17% Similarity=0.275 Sum_probs=55.5
Q ss_pred EEeCChhHHHHHHHHHhcCCCCeE--E-EeCCC----C--c-----ChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHH
Q 011570 123 VMSGGATGAHETVAFCLADPGDAF--L-VPTPY----Y--P-----GFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEA 188 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~~gd~V--l-v~~P~----y--~-----~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 188 (483)
++.+|+......+..+. +.|..| + +..+. | . .....++.+ |++...+.++... ....+.|..
T Consensus 2 vl~SGGkDS~~al~~a~-~~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~l-gip~~~i~~~~~~--~~~~~~l~~ 77 (218)
T TIGR03679 2 ALYSGGKDSNYALYKAL-EEGHEVRCLITVVPENEESYMFHTPNIELTRLQAEAL-GIPLVKIETSGEK--EKEVEDLKG 77 (218)
T ss_pred eeecCcHHHHHHHHHHH-HcCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHh-CCCEEEEECCCCC--hHHHHHHHH
Confidence 45567776666665444 356544 2 22221 1 1 111233443 8887777765211 123455767
Q ss_pred HHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcE
Q 011570 189 AYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIH 234 (483)
Q Consensus 189 ~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~ 234 (483)
++.....+ .+..|+ +|.+.+......+-++|.+.|+.
T Consensus 78 ~l~~~~~~--g~~~vv-------~G~i~sd~~~~~~e~v~~~~gl~ 114 (218)
T TIGR03679 78 ALKELKRE--GVEGIV-------TGAIASRYQKSRIERICEELGLK 114 (218)
T ss_pred HHHHHHHc--CCCEEE-------ECCcccHhHHHHHHHHHHhCCCe
Confidence 77665444 455555 58888877777777888777764
No 483
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=38.96 E-value=95 Score=29.33 Aligned_cols=93 Identities=20% Similarity=0.353 Sum_probs=55.9
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCC-CCcChHHHHh-hhcCcEEEEeecCCCCCccc-CHHHHHHHHHHHHhcC
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTP-YYPGFDRDLR-WRTGVQLVPVVCDSSNDFKV-TMEALEAAYEKAQESN 197 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P-~y~~~~~~~~-~~~G~~~~~v~~~~~~~~~~-d~~~l~~~i~~~~~~~ 197 (483)
+|++-.|++++-.++ ..|.+.|. |+++.- .|.. .... ...+..+ .. + .+ |.+.+++.|++.
T Consensus 2 ~ILvlgGTtE~r~la-~~L~~~g~-v~~sv~t~~g~--~~~~~~~~~~~v---~~---G--~lg~~~~l~~~l~~~---- 65 (249)
T PF02571_consen 2 KILVLGGTTEGRKLA-ERLAEAGY-VIVSVATSYGG--ELLKPELPGLEV---RV---G--RLGDEEGLAEFLREN---- 65 (249)
T ss_pred EEEEEechHHHHHHH-HHHHhcCC-EEEEEEhhhhH--hhhccccCCceE---EE---C--CCCCHHHHHHHHHhC----
Confidence 588999999997666 55667777 554432 2332 1111 1012222 21 1 35 889999998763
Q ss_pred CceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEE
Q 011570 198 IRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLV 236 (483)
Q Consensus 198 ~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI 236 (483)
++++| .+-..|--..++ +.+.+.|++.|+..+
T Consensus 66 -~i~~v--IDATHPfA~~is----~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 66 -GIDAV--IDATHPFAAEIS----QNAIEACRELGIPYL 97 (249)
T ss_pred -CCcEE--EECCCchHHHHH----HHHHHHHhhcCcceE
Confidence 56544 345666655555 777788888887654
No 484
>PRK06180 short chain dehydrogenase; Provisional
Probab=38.65 E-value=3.4e+02 Score=25.51 Aligned_cols=80 Identities=11% Similarity=0.063 Sum_probs=39.8
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
.++||.|+...=..+...|...|..|++..-.-......... .+.++..+..|- -|.+.+.+.++...+.-.++
T Consensus 6 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~-~~~~~~~~~~D~-----~d~~~~~~~~~~~~~~~~~~ 79 (277)
T PRK06180 6 TWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL-HPDRALARLLDV-----TDFDAIDAVVADAEATFGPI 79 (277)
T ss_pred EEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh-cCCCeeEEEccC-----CCHHHHHHHHHHHHHHhCCC
Confidence 466666655444445566777887776654322222222222 133455555442 25666766666543332345
Q ss_pred eEEEEe
Q 011570 201 KGVLIT 206 (483)
Q Consensus 201 ~~i~l~ 206 (483)
.+|+-+
T Consensus 80 d~vv~~ 85 (277)
T PRK06180 80 DVLVNN 85 (277)
T ss_pred CEEEEC
Confidence 655544
No 485
>PRK05650 short chain dehydrogenase; Provisional
Probab=38.63 E-value=3.3e+02 Score=25.40 Aligned_cols=80 Identities=21% Similarity=0.220 Sum_probs=42.1
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
.+++|.|++..=..+...|.+.|..|++....-...... ++.. |.++..+..|- .|.+.+++.+.....+.
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~i~~~~ 75 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA-GGDGFYQRCDV-----RDYSQLTALAQACEEKW 75 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccC-----CCHHHHHHHHHHHHHHc
Confidence 356666555433445566778888877765433222222 2222 55665565543 25666666665443333
Q ss_pred CceeEEEEe
Q 011570 198 IRIKGVLIT 206 (483)
Q Consensus 198 ~~~~~i~l~ 206 (483)
.++..+|.+
T Consensus 76 ~~id~lI~~ 84 (270)
T PRK05650 76 GGIDVIVNN 84 (270)
T ss_pred CCCCEEEEC
Confidence 356655544
No 486
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=38.57 E-value=3.2e+02 Score=25.18 Aligned_cols=82 Identities=21% Similarity=0.231 Sum_probs=43.7
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh--cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR--TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
..++||.|+...=..+...|.+.|..|++....-.......... .|.++..+..|- -|.+.+++++.......
T Consensus 8 ~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 8 KTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDV-----TNEDAVNAGIDKVAERF 82 (262)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 45666655543334555667788887776655433333322221 255665555543 25667776666543332
Q ss_pred CceeEEEEe
Q 011570 198 IRIKGVLIT 206 (483)
Q Consensus 198 ~~~~~i~l~ 206 (483)
.++..|+-+
T Consensus 83 ~~~d~vi~~ 91 (262)
T PRK13394 83 GSVDILVSN 91 (262)
T ss_pred CCCCEEEEC
Confidence 346655444
No 487
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=38.27 E-value=3.2e+02 Score=25.05 Aligned_cols=77 Identities=13% Similarity=0.179 Sum_probs=43.7
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
....+++|.|+...=..+...|.+.|..|++..... .... +.++..++.|- -|.+.+++.+.+.....
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 74 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------LTQE-DYPFATFVLDV-----SDAAAVAQVCQRLLAET 74 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------hhhc-CCceEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 344677776665444455566778888777765433 2222 55555566543 25677777666544333
Q ss_pred CceeEEEEe
Q 011570 198 IRIKGVLIT 206 (483)
Q Consensus 198 ~~~~~i~l~ 206 (483)
.++++++.+
T Consensus 75 ~~id~vi~~ 83 (252)
T PRK08220 75 GPLDVLVNA 83 (252)
T ss_pred CCCCEEEEC
Confidence 456655433
No 488
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=38.21 E-value=2.9e+02 Score=25.59 Aligned_cols=102 Identities=16% Similarity=0.100 Sum_probs=51.6
Q ss_pred CCCcEEEeCChh-HHH-HHHHHHhcCCCCeEEEeCC-------CCcC-------hHHHHhhhcCcEEEEeecCCCCCccc
Q 011570 118 DPDRIVMSGGAT-GAH-ETVAFCLADPGDAFLVPTP-------YYPG-------FDRDLRWRTGVQLVPVVCDSSNDFKV 181 (483)
Q Consensus 118 ~~~~i~it~G~~-~al-~~~~~~l~~~gd~Vlv~~P-------~y~~-------~~~~~~~~~G~~~~~v~~~~~~~~~~ 181 (483)
....++||.|+. .+| ..+...|.+.|..|++... .+.. ....++.. |.++..++.|- -
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~D~-----~ 78 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN-GVKVSSMELDL-----T 78 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc-CCeEEEEEcCC-----C
Confidence 445677777652 233 2333556678877776521 1110 11122332 67777776653 2
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEeCCCCC-C--cCCCCHHHHHHHHH
Q 011570 182 TMEALEAAYEKAQESNIRIKGVLITNPSNP-L--GTFLDRETLKDIVS 226 (483)
Q Consensus 182 d~~~l~~~i~~~~~~~~~~~~i~l~~P~NP-t--G~~~~~~~l~~i~~ 226 (483)
|.+++++.+....++..++..+ +.|+... . -.-.+.+++++..+
T Consensus 79 ~~~~i~~~~~~~~~~~g~id~l-i~~ag~~~~~~~~~~~~~~~~~~~~ 125 (256)
T PRK12859 79 QNDAPKELLNKVTEQLGYPHIL-VNNAAYSTNNDFSNLTAEELDKHYM 125 (256)
T ss_pred CHHHHHHHHHHHHHHcCCCcEE-EECCCCCCCCChhhCCHHHHHHHHH
Confidence 5777877777654443355554 4444211 1 12345555555444
No 489
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=38.20 E-value=1.2e+02 Score=25.84 Aligned_cols=56 Identities=20% Similarity=0.194 Sum_probs=39.5
Q ss_pred cCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHH-HHHHHHHHHhh-cCcE-EEEcccc
Q 011570 181 VTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRE-TLKDIVSFINE-KNIH-LVCDEIY 241 (483)
Q Consensus 181 ~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~-~l~~i~~~a~~-~~~~-iI~Deay 241 (483)
.+.+.+.+.+.++ .+..|++-.|.|+.|..-+.. ..+++++..++ .++. ++.||-.
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DERl 98 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDERL 98 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCcc
Confidence 4889999999886 788899999999999988744 35566665443 3443 3445543
No 490
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.
Probab=37.79 E-value=2.4e+02 Score=26.75 Aligned_cols=100 Identities=18% Similarity=0.131 Sum_probs=55.1
Q ss_pred CCCcEEEeCChh----HHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGAT----GAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 118 ~~~~i~it~G~~----~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
+...|++..|+. .++...+.++.-.-+.|-+..|.-. ...+... +-+++..++++ ..+.+++.+.
T Consensus 23 ~~G~vliiaGs~~~~GA~ila~l~~~~~g~~~v~~~~~~~~--~~~i~~~-~pe~~~~~~~~------~~~~~~~~~~-- 91 (272)
T TIGR00196 23 QYGRVLIIGGSDDYSGAPLLAALAALRAGAGLVTVAAPENV--ITLINSV-SPELIVHRLGW------KVDEDEELLE-- 91 (272)
T ss_pred CCCeEEEEeCCCCCCcHHHHHHHHHHHhCCCeEEEEEchhh--HHHHhhc-CCEEEEecchh------hHHHHHhhhc--
Confidence 344677777753 4555555555443355555555421 2233433 66666655431 2344444332
Q ss_pred HhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcc
Q 011570 194 QESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDE 239 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~De 239 (483)
+.+++++ ++.-|++.. ..++++.+++++..+|+|-
T Consensus 92 -----~~davvi-g~Gl~~~~~-----~~~l~~~~~~~~~pvVlDa 126 (272)
T TIGR00196 92 -----RYDVVVI-GPGLGQDPS-----FKKAVEEVLELDKPVVLDA 126 (272)
T ss_pred -----cCCEEEE-cCCCCCCHH-----HHHHHHHHHhcCCCEEEEh
Confidence 3455554 555444432 7778888888899999994
No 491
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=37.70 E-value=3.2e+02 Score=24.98 Aligned_cols=81 Identities=16% Similarity=0.201 Sum_probs=42.5
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh--cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR--TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
.++||.|+...=..+...|++.|.+|++..-.-.......... .+.++..+..|- .|.+.+++++....+.-.
T Consensus 3 ~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 3 TALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADV-----TKEDEIADMIAAAAAEFG 77 (255)
T ss_pred EEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHHhcC
Confidence 3666655544445555677788888776654432222221111 144555555443 356777776665443333
Q ss_pred ceeEEEEe
Q 011570 199 RIKGVLIT 206 (483)
Q Consensus 199 ~~~~i~l~ 206 (483)
..+.|+.+
T Consensus 78 ~~d~vi~~ 85 (255)
T TIGR01963 78 GLDILVNN 85 (255)
T ss_pred CCCEEEEC
Confidence 45655544
No 492
>PRK08309 short chain dehydrogenase; Provisional
Probab=37.23 E-value=2.9e+02 Score=24.37 Aligned_cols=97 Identities=18% Similarity=0.118 Sum_probs=50.7
Q ss_pred EEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh-cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 122 IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR-TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
+++|.|+ ..+..+...|.+.|..|.+..-............ .+..+..++.|- -|.+.+.+.+.....+..+.
T Consensus 3 vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv-----~d~~sv~~~i~~~l~~~g~i 76 (177)
T PRK08309 3 ALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDY-----HDDDALKLAIKSTIEKNGPF 76 (177)
T ss_pred EEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 5666665 5556677888889988877643322211111111 123444444442 26677777776654443333
Q ss_pred eEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCc
Q 011570 201 KGVLITNPSNPLGTFLDRETLKDIVSFINEKNI 233 (483)
Q Consensus 201 ~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~ 233 (483)
.. ++..-|.- . -+.++++|++.++
T Consensus 77 d~-lv~~vh~~----~----~~~~~~~~~~~gv 100 (177)
T PRK08309 77 DL-AVAWIHSS----A----KDALSVVCRELDG 100 (177)
T ss_pred eE-EEEecccc----c----hhhHHHHHHHHcc
Confidence 33 33333321 1 2667777777763
No 493
>PRK08278 short chain dehydrogenase; Provisional
Probab=37.14 E-value=3.6e+02 Score=25.34 Aligned_cols=81 Identities=20% Similarity=0.229 Sum_probs=43.9
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC-------h---HHHHhhhcCcEEEEeecCCCCCcccCHHHHHHH
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPG-------F---DRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAA 189 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~-------~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~ 189 (483)
..++||.|+...=..+...|.+.|..|++....... . ...+... |.++..+..|- -+.+.+++.
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~D~-----~~~~~i~~~ 80 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA-GGQALPLVGDV-----RDEDQVAAA 80 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc-CCceEEEEecC-----CCHHHHHHH
Confidence 356666665544344556677888887766543321 1 1112222 56666666553 356777776
Q ss_pred HHHHHhcCCceeEEEEe
Q 011570 190 YEKAQESNIRIKGVLIT 206 (483)
Q Consensus 190 i~~~~~~~~~~~~i~l~ 206 (483)
+.+..+.-.+++.++.+
T Consensus 81 ~~~~~~~~g~id~li~~ 97 (273)
T PRK08278 81 VAKAVERFGGIDICVNN 97 (273)
T ss_pred HHHHHHHhCCCCEEEEC
Confidence 66543333356655544
No 494
>PRK07024 short chain dehydrogenase; Provisional
Probab=37.14 E-value=3.4e+02 Score=25.09 Aligned_cols=80 Identities=14% Similarity=0.096 Sum_probs=41.2
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcC-cEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTG-VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
.++||.|++..=..+...|.+.|..|++..-.-............ .++..+.+|- -|.+.+++++.+...+..+
T Consensus 4 ~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 4 KVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADV-----RDADALAAAAADFIAAHGL 78 (257)
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCC-----CCHHHHHHHHHHHHHhCCC
Confidence 466666554333344455677888887766443322222222101 1555555543 2567777777655444345
Q ss_pred eeEEEE
Q 011570 200 IKGVLI 205 (483)
Q Consensus 200 ~~~i~l 205 (483)
++.++.
T Consensus 79 id~lv~ 84 (257)
T PRK07024 79 PDVVIA 84 (257)
T ss_pred CCEEEE
Confidence 664443
No 495
>PRK10785 maltodextrin glucosidase; Provisional
Probab=36.96 E-value=1.1e+02 Score=33.14 Aligned_cols=61 Identities=8% Similarity=0.174 Sum_probs=43.2
Q ss_pred cCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcCCC-------------CHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 181 VTMEALEAAYEKAQESNIRIKGVLITNP-SNPLGTFL-------------DRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 181 ~d~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~~~-------------~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
=|+..+.+.|.-.+.- .+.+|+++-+ .+|+..-+ +.++++++++.|+++|+-||.|-++..
T Consensus 176 GDl~GI~~kLdYL~~L--Gv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~NH 250 (598)
T PRK10785 176 GDLDGISEKLPYLKKL--GVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVFNH 250 (598)
T ss_pred cCHHHHHHHHHHHHHc--CCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 3777777776544332 5677877744 34433211 668999999999999999999999854
No 496
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=36.70 E-value=1.7e+02 Score=28.21 Aligned_cols=56 Identities=13% Similarity=0.025 Sum_probs=39.8
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc---CcEEE
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK---NIHLV 236 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~---~~~iI 236 (483)
+..+|.+.+++.++...+. .++.|+++ -++=-+..+|.+|+.++++.+.+. ++.||
T Consensus 15 dg~iD~~~l~~l~~~l~~~--Gv~gi~v~-GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi 73 (289)
T cd00951 15 DGSFDEDAYRAHVEWLLSY--GAAALFAA-GGTGEFFSLTPDEYAQVVRAAVEETAGRVPVL 73 (289)
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-cCCcCcccCCHHHHHHHHHHHHHHhCCCCCEE
Confidence 3479999999988876554 45666643 445556788999999999877663 34555
No 497
>PRK12743 oxidoreductase; Provisional
Probab=35.89 E-value=3.6e+02 Score=24.94 Aligned_cols=80 Identities=18% Similarity=0.137 Sum_probs=43.1
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeC-CCCcChH---HHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPT-PYYPGFD---RDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~-P~y~~~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
.++||.|++..=..+...|.+.|..|++.. ..-.... ..++.. |.++..+..|- -|.+.+++.+.+..+.
T Consensus 4 ~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 77 (256)
T PRK12743 4 VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH-GVRAEIRQLDL-----SDLPEGAQALDKLIQR 77 (256)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-CCceEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 466666655444455577788898876642 2222111 222222 65666555543 2567777766655444
Q ss_pred CCceeEEEEe
Q 011570 197 NIRIKGVLIT 206 (483)
Q Consensus 197 ~~~~~~i~l~ 206 (483)
-.+++.|+.+
T Consensus 78 ~~~id~li~~ 87 (256)
T PRK12743 78 LGRIDVLVNN 87 (256)
T ss_pred cCCCCEEEEC
Confidence 3456665544
No 498
>PRK06114 short chain dehydrogenase; Provisional
Probab=35.45 E-value=3.6e+02 Score=24.87 Aligned_cols=83 Identities=16% Similarity=0.220 Sum_probs=44.2
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCC-cChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYY-PGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y-~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
+...++||.|+...=..+...|.+.|..|++....- ..... .+... +.++..++.|- -|.+.+++.+.+.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~i~~~~~~~ 80 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA-GRRAIQIAADV-----TSKADLRAAVART 80 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-CCceEEEEcCC-----CCHHHHHHHHHHH
Confidence 344566665555433445566778887777664321 11222 22222 55666666543 2567777777665
Q ss_pred HhcCCceeEEEEe
Q 011570 194 QESNIRIKGVLIT 206 (483)
Q Consensus 194 ~~~~~~~~~i~l~ 206 (483)
..+-.+++.++.+
T Consensus 81 ~~~~g~id~li~~ 93 (254)
T PRK06114 81 EAELGALTLAVNA 93 (254)
T ss_pred HHHcCCCCEEEEC
Confidence 4443456655433
No 499
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=35.33 E-value=2.8e+02 Score=25.89 Aligned_cols=92 Identities=13% Similarity=0.125 Sum_probs=57.9
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcC--hHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPG--FDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~--~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
..+.++++...+......|++|++....-.. ....+... |+++..+++-....-..+.+.+...+.. .+.++
T Consensus 105 ~~~~~~~l~~~l~~~~~~~~~vl~~~~~~~r~~l~~~L~~~-G~~v~~~~~Y~~~~~~~~~~~~~~~~~~-----~~~d~ 178 (248)
T COG1587 105 EDGDSEGLLEELPELLKGGKRVLILRGNGGREVLEEKLEER-GAEVREVEVYRTEPPPLDEATLIELLKL-----GEVDA 178 (248)
T ss_pred CccchHHHHHHhhhhccCCCeEEEEcCCCchHHHHHHHHhC-CCEEEEEeeeeecCCCccHHHHHHHHHh-----CCCCE
Confidence 3688888888887776668888888655433 44555554 9999888864322222344444455543 36778
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKN 232 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~ 232 (483)
|+++ |....+.+.+.+.+.+
T Consensus 179 v~ft----------S~~~v~~~~~~~~~~~ 198 (248)
T COG1587 179 VVFT----------SSSAVRALLALAPESG 198 (248)
T ss_pred EEEe----------CHHHHHHHHHHccccc
Confidence 8876 4445777777666544
No 500
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=35.17 E-value=1.3e+02 Score=28.48 Aligned_cols=92 Identities=17% Similarity=0.168 Sum_probs=58.4
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCC-CcChHHHHhhhcCcEEEEeecCCCCCccc-CHHHHHHHHHHHHhcC
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPY-YPGFDRDLRWRTGVQLVPVVCDSSNDFKV-TMEALEAAYEKAQESN 197 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~-y~~~~~~~~~~~G~~~~~v~~~~~~~~~~-d~~~l~~~i~~~~~~~ 197 (483)
..|++-.|++++-.++ ..|.+.|..|++..-+ |.. .... +..+.. + .+ |.+.+++.|++.
T Consensus 3 ~~IlvlgGT~egr~la-~~L~~~g~~v~~Svat~~g~----~~~~-~~~v~~------G--~l~~~~~l~~~l~~~---- 64 (248)
T PRK08057 3 PRILLLGGTSEARALA-RALAAAGVDIVLSLAGRTGG----PADL-PGPVRV------G--GFGGAEGLAAYLREE---- 64 (248)
T ss_pred ceEEEEechHHHHHHH-HHHHhCCCeEEEEEccCCCC----cccC-CceEEE------C--CCCCHHHHHHHHHHC----
Confidence 4689999999997766 4555667666655433 543 2222 443332 1 35 889999999763
Q ss_pred CceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEE
Q 011570 198 IRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLV 236 (483)
Q Consensus 198 ~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI 236 (483)
++++| .+...|--..++ +.+.+.|++.|+..+
T Consensus 65 -~i~~V--IDATHPfA~~is----~~a~~ac~~~~ipyi 96 (248)
T PRK08057 65 -GIDLV--IDATHPYAAQIS----ANAAAACRALGIPYL 96 (248)
T ss_pred -CCCEE--EECCCccHHHHH----HHHHHHHHHhCCcEE
Confidence 66654 345566555555 677788888887654
Done!