Query 011570
Match_columns 483
No_of_seqs 260 out of 2706
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 10:53:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011570.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011570hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3piu_A 1-aminocyclopropane-1-c 100.0 1.3E-56 4.4E-61 460.8 41.7 427 10-438 2-433 (435)
2 1iay_A ACC synthase 2, 1-amino 100.0 8.4E-55 2.9E-59 446.3 44.4 425 11-437 1-427 (428)
3 3tcm_A Alanine aminotransferas 100.0 1.8E-47 6E-52 399.3 41.2 350 86-439 126-496 (500)
4 1b5p_A Protein (aspartate amin 100.0 9.4E-49 3.2E-53 395.9 30.5 350 46-435 31-383 (385)
5 3aow_A Putative uncharacterize 100.0 1.9E-46 6.4E-51 386.5 36.9 360 46-438 76-446 (448)
6 2x5d_A Probable aminotransfera 100.0 6.4E-47 2.2E-51 385.9 31.6 361 45-439 36-400 (412)
7 3k7y_A Aspartate aminotransfer 100.0 1.1E-46 3.8E-51 382.0 32.6 345 46-436 29-404 (405)
8 3jtx_A Aminotransferase; NP_28 100.0 3.6E-46 1.2E-50 377.9 36.4 352 44-434 28-395 (396)
9 1gd9_A Aspartate aminotransfer 100.0 2E-46 6.8E-51 379.0 33.4 356 46-437 26-386 (389)
10 3b46_A Aminotransferase BNA3; 100.0 5.1E-47 1.8E-51 390.8 29.0 359 45-432 56-442 (447)
11 3ihj_A Alanine aminotransferas 100.0 6.1E-46 2.1E-50 387.2 37.5 349 87-439 122-495 (498)
12 2o1b_A Aminotransferase, class 100.0 2.2E-46 7.7E-51 381.0 31.3 353 46-437 47-403 (404)
13 3fvs_A Kynurenine--oxoglutarat 100.0 1.3E-46 4.3E-51 384.6 27.5 364 46-436 28-421 (422)
14 3e2y_A Kynurenine-oxoglutarate 100.0 2.6E-46 8.9E-51 380.7 29.6 359 46-432 23-408 (410)
15 3h14_A Aminotransferase, class 100.0 1.1E-45 3.7E-50 374.0 32.2 349 45-438 30-383 (391)
16 3dyd_A Tyrosine aminotransfera 100.0 1.3E-45 4.6E-50 378.0 31.9 360 45-438 53-425 (427)
17 2dou_A Probable N-succinyldiam 100.0 1.2E-45 4.1E-50 371.7 30.6 347 46-434 25-375 (376)
18 1u08_A Hypothetical aminotrans 100.0 1.2E-45 4.1E-50 373.0 30.1 349 47-432 31-385 (386)
19 2r2n_A Kynurenine/alpha-aminoa 100.0 3.6E-45 1.2E-49 374.5 33.6 329 87-436 71-423 (425)
20 1c7n_A Cystalysin; transferase 100.0 1.4E-45 4.7E-50 374.2 29.2 357 45-438 30-394 (399)
21 3ezs_A Aminotransferase ASPB; 100.0 8.6E-45 2.9E-49 365.2 34.3 344 47-436 24-374 (376)
22 1j32_A Aspartate aminotransfer 100.0 2.6E-45 8.8E-50 370.7 30.5 354 46-437 30-387 (388)
23 1yiz_A Kynurenine aminotransfe 100.0 1.6E-45 5.5E-50 377.4 29.4 363 46-435 37-427 (429)
24 1bw0_A TAT, protein (tyrosine 100.0 4E-45 1.4E-49 372.9 31.8 363 44-439 31-415 (416)
25 3dzz_A Putative pyridoxal 5'-p 100.0 4.5E-45 1.6E-49 368.9 31.5 356 46-437 27-389 (391)
26 3ele_A Amino transferase; RER0 100.0 5.5E-45 1.9E-49 369.6 32.0 347 46-438 35-397 (398)
27 3qgu_A LL-diaminopimelate amin 100.0 2.2E-45 7.4E-50 378.8 29.4 353 45-437 68-440 (449)
28 3fdb_A Beta C-S lyase, putativ 100.0 2.1E-45 7.3E-50 369.6 28.6 349 45-436 22-375 (377)
29 3kax_A Aminotransferase, class 100.0 4.5E-45 1.5E-49 367.9 30.7 352 46-434 24-382 (383)
30 1vp4_A Aminotransferase, putat 100.0 1.8E-44 6.2E-49 369.3 35.1 363 46-440 43-421 (425)
31 1o4s_A Aspartate aminotransfer 100.0 1.1E-44 3.8E-49 366.6 33.1 344 46-435 41-387 (389)
32 3nra_A Aspartate aminotransfer 100.0 7.4E-45 2.5E-49 369.4 30.6 358 45-438 38-406 (407)
33 1xi9_A Putative transaminase; 100.0 1E-44 3.5E-49 368.8 31.3 354 46-437 38-403 (406)
34 2x5f_A Aspartate_tyrosine_phen 100.0 1.6E-44 5.5E-49 370.2 32.7 355 46-437 47-429 (430)
35 2o0r_A RV0858C (N-succinyldiam 100.0 4.2E-45 1.4E-49 372.3 27.5 355 47-437 26-396 (411)
36 1d2f_A MALY protein; aminotran 100.0 9.5E-45 3.2E-49 367.0 29.8 352 46-437 28-389 (390)
37 3get_A Histidinol-phosphate am 100.0 2.3E-44 8E-49 360.7 32.2 332 46-434 30-364 (365)
38 4dq6_A Putative pyridoxal phos 100.0 1.8E-44 6E-49 364.6 29.9 351 46-434 32-390 (391)
39 3rq1_A Aminotransferase class 100.0 1E-43 3.5E-48 362.8 35.4 352 46-438 38-416 (418)
40 2zy4_A L-aspartate beta-decarb 100.0 1.3E-44 4.4E-49 380.4 28.8 357 48-440 106-525 (546)
41 3g0t_A Putative aminotransfera 100.0 9.9E-45 3.4E-49 372.3 26.9 357 46-436 44-436 (437)
42 3ei9_A LL-diaminopimelate amin 100.0 3.3E-44 1.1E-48 368.1 28.0 350 46-436 56-427 (432)
43 3d6k_A Putative aminotransfera 100.0 9.9E-44 3.4E-48 363.5 31.0 324 87-439 69-420 (422)
44 2z61_A Probable aspartate amin 100.0 8.8E-44 3E-48 357.3 30.1 338 46-435 29-369 (370)
45 3ppl_A Aspartate aminotransfer 100.0 1.8E-43 6.2E-48 362.1 32.4 326 86-440 70-423 (427)
46 2zc0_A Alanine glyoxylate tran 100.0 4.9E-43 1.7E-47 356.3 35.3 359 47-437 35-404 (407)
47 3l8a_A METC, putative aminotra 100.0 6.5E-44 2.2E-48 364.8 28.4 354 45-435 60-420 (421)
48 3t18_A Aminotransferase class 100.0 4.4E-43 1.5E-47 357.5 34.2 349 46-438 37-411 (413)
49 1fg7_A Histidinol phosphate am 100.0 5.8E-43 2E-47 349.8 33.9 321 46-432 29-353 (356)
50 3ly1_A Putative histidinol-pho 100.0 9.1E-43 3.1E-47 347.5 35.0 336 44-436 14-351 (354)
51 2gb3_A Aspartate aminotransfer 100.0 2.9E-43 1E-47 358.5 32.0 351 46-439 43-404 (409)
52 2zyj_A Alpha-aminodipate amino 100.0 4.3E-43 1.5E-47 355.7 33.0 349 47-438 33-394 (397)
53 1v2d_A Glutamine aminotransfer 100.0 2.6E-43 8.8E-48 355.3 30.0 342 47-440 26-374 (381)
54 4f4e_A Aromatic-amino-acid ami 100.0 1.5E-43 5.2E-48 361.9 28.6 346 46-434 49-419 (420)
55 7aat_A Aspartate aminotransfer 100.0 1.2E-43 4.1E-48 360.2 27.3 344 47-434 29-400 (401)
56 3ffh_A Histidinol-phosphate am 100.0 1.8E-42 6.2E-47 346.7 34.4 329 46-433 32-362 (363)
57 3fsl_A Aromatic-amino-acid ami 100.0 6.2E-43 2.1E-47 354.2 29.4 345 46-433 26-396 (397)
58 3asa_A LL-diaminopimelate amin 100.0 1.8E-43 6.2E-48 359.0 25.4 349 46-437 33-393 (400)
59 3euc_A Histidinol-phosphate am 100.0 3.2E-42 1.1E-46 345.4 33.9 340 38-435 23-366 (367)
60 1lc5_A COBD, L-threonine-O-3-p 100.0 4.3E-42 1.5E-46 344.3 32.8 336 45-438 23-361 (364)
61 3f6t_A Aspartate aminotransfer 100.0 4.7E-43 1.6E-47 368.3 24.9 358 47-440 104-528 (533)
62 3ez1_A Aminotransferase MOCR f 100.0 8.5E-42 2.9E-46 349.1 32.6 327 86-440 61-418 (423)
63 3op7_A Aminotransferase class 100.0 3.2E-42 1.1E-46 346.5 28.9 315 87-439 56-373 (375)
64 4eu1_A Mitochondrial aspartate 100.0 2.1E-42 7.2E-47 352.1 26.8 344 46-434 41-408 (409)
65 3b1d_A Betac-S lyase; HET: PLP 100.0 7.9E-46 2.7E-50 375.3 0.0 353 46-435 31-391 (392)
66 3g7q_A Valine-pyruvate aminotr 100.0 1.9E-42 6.5E-47 353.0 24.5 356 46-439 31-415 (417)
67 2hox_A ALLIIN lyase 1; cystein 100.0 1.6E-43 5.6E-48 362.1 15.9 356 18-436 20-424 (427)
68 3ftb_A Histidinol-phosphate am 100.0 3.9E-41 1.3E-45 336.5 32.7 333 44-435 24-359 (361)
69 3p1t_A Putative histidinol-pho 100.0 2.3E-41 7.9E-46 334.9 30.5 323 42-435 12-335 (337)
70 1ajs_A Aspartate aminotransfer 100.0 1E-41 3.5E-46 347.3 28.1 349 46-436 30-410 (412)
71 3if2_A Aminotransferase; YP_26 100.0 1.1E-41 3.8E-46 350.4 26.6 366 46-440 31-443 (444)
72 2q7w_A Aspartate aminotransfer 100.0 7.2E-42 2.5E-46 346.3 23.6 345 46-433 26-395 (396)
73 1yaa_A Aspartate aminotransfer 100.0 2.8E-41 9.6E-46 344.1 27.9 348 46-436 29-410 (412)
74 3fkd_A L-threonine-O-3-phospha 100.0 5.2E-41 1.8E-45 334.5 29.1 326 46-438 15-343 (350)
75 3bwn_A AT1G70560, L-tryptophan 100.0 1.3E-41 4.4E-46 344.4 23.8 333 44-436 20-386 (391)
76 3meb_A Aspartate aminotransfer 100.0 1.5E-40 5.1E-45 342.5 29.8 316 87-436 87-443 (448)
77 3cq5_A Histidinol-phosphate am 100.0 1.3E-39 4.3E-44 327.1 33.2 333 48-435 32-366 (369)
78 4h51_A Aspartate aminotransfer 100.0 3E-40 1E-44 335.0 28.6 347 48-440 46-420 (420)
79 3hdo_A Histidinol-phosphate am 100.0 1.4E-39 4.7E-44 325.6 32.6 330 45-437 25-355 (360)
80 2ay1_A Aroat, aromatic amino a 100.0 9.5E-41 3.3E-45 337.9 24.3 342 46-433 26-392 (394)
81 1uu1_A Histidinol-phosphate am 100.0 1.7E-39 5.8E-44 321.8 27.2 316 45-433 18-334 (335)
82 3a2b_A Serine palmitoyltransfe 100.0 4.4E-36 1.5E-40 304.2 31.7 342 45-437 42-392 (398)
83 3tqx_A 2-amino-3-ketobutyrate 100.0 2.1E-34 7.3E-39 291.4 26.6 304 93-437 87-396 (399)
84 1fc4_A 2-amino-3-ketobutyrate 100.0 8.6E-34 3E-38 287.5 26.6 340 45-437 44-397 (401)
85 1vjo_A Alanine--glyoxylate ami 100.0 1.4E-33 4.8E-38 285.1 26.9 298 96-434 65-392 (393)
86 2dr1_A PH1308 protein, 386AA l 100.0 7.4E-33 2.5E-37 278.7 30.0 303 96-439 51-381 (386)
87 1bs0_A Protein (8-amino-7-oxon 100.0 1.1E-32 3.9E-37 277.6 28.1 335 45-433 38-383 (384)
88 1eg5_A Aminotransferase; PLP-d 100.0 4.7E-33 1.6E-37 279.8 24.0 301 92-439 42-378 (384)
89 1t3i_A Probable cysteine desul 100.0 1.2E-32 4.2E-37 280.3 26.0 340 46-439 27-415 (420)
90 2bwn_A 5-aminolevulinate synth 100.0 1.7E-32 5.9E-37 278.0 26.1 306 89-436 86-399 (401)
91 2w8t_A SPT, serine palmitoyltr 100.0 5.5E-32 1.9E-36 276.9 28.9 308 96-447 111-425 (427)
92 1svv_A Threonine aldolase; str 100.0 5E-32 1.7E-36 269.7 27.0 336 47-436 14-357 (359)
93 2z9v_A Aspartate aminotransfer 100.0 1.7E-31 5.7E-36 269.6 29.7 298 95-438 43-372 (392)
94 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 8.2E-33 2.8E-37 277.0 19.8 297 90-436 49-369 (371)
95 1e5e_A MGL, methionine gamma-l 100.0 1.2E-31 4.3E-36 272.2 28.6 288 88-439 54-397 (404)
96 1kmj_A Selenocysteine lyase; p 100.0 4.8E-32 1.7E-36 274.5 25.5 298 92-437 65-405 (406)
97 2ch1_A 3-hydroxykynurenine tra 100.0 7.8E-32 2.7E-36 272.4 26.6 298 96-438 53-384 (396)
98 3kki_A CAI-1 autoinducer synth 100.0 3.6E-31 1.2E-35 269.2 30.9 298 90-436 100-403 (409)
99 1elu_A L-cysteine/L-cystine C- 100.0 5.2E-33 1.8E-37 280.2 17.1 296 89-432 53-387 (390)
100 2huf_A Alanine glyoxylate amin 100.0 1.1E-31 3.6E-36 271.2 26.4 299 95-439 53-385 (393)
101 1jg8_A L-ALLO-threonine aldola 100.0 5.4E-32 1.9E-36 268.8 23.2 330 45-436 2-345 (347)
102 3f9t_A TDC, L-tyrosine decarbo 100.0 1.4E-31 4.8E-36 269.9 26.2 304 95-435 66-396 (397)
103 1m32_A 2-aminoethylphosphonate 100.0 1.2E-31 4.2E-36 267.5 24.0 298 94-436 37-364 (366)
104 2ez2_A Beta-tyrosinase, tyrosi 100.0 1.3E-30 4.5E-35 268.8 32.5 319 89-438 70-432 (456)
105 3zrp_A Serine-pyruvate aminotr 100.0 7.3E-31 2.5E-35 263.8 29.2 296 96-440 37-366 (384)
106 3nnk_A Ureidoglycine-glyoxylat 100.0 7.6E-31 2.6E-35 266.4 29.3 296 97-438 49-391 (411)
107 4eb5_A Probable cysteine desul 100.0 3.4E-31 1.2E-35 266.2 26.4 298 95-439 44-375 (382)
108 4hvk_A Probable cysteine desul 100.0 4.8E-31 1.6E-35 264.6 27.2 296 98-440 47-376 (382)
109 3kgw_A Alanine-glyoxylate amin 100.0 8.7E-31 3E-35 264.1 28.3 299 96-439 58-390 (393)
110 1iug_A Putative aspartate amin 100.0 2.4E-31 8.2E-36 264.3 23.3 291 95-437 35-348 (352)
111 1sff_A 4-aminobutyrate aminotr 100.0 3.3E-31 1.1E-35 270.7 23.2 349 45-437 40-424 (426)
112 1v72_A Aldolase; PLP-dependent 100.0 2.2E-30 7.7E-35 257.6 28.6 334 46-437 7-353 (356)
113 2dkj_A Serine hydroxymethyltra 100.0 4.5E-31 1.5E-35 267.8 23.1 340 46-436 23-387 (407)
114 3isl_A Purine catabolism prote 100.0 5.7E-30 2E-34 260.3 31.1 297 96-438 46-391 (416)
115 3lvm_A Cysteine desulfurase; s 100.0 2.1E-30 7.1E-35 264.4 26.8 343 45-440 20-402 (423)
116 2yrr_A Aminotransferase, class 100.0 1.6E-30 5.4E-35 258.1 24.5 293 95-435 34-351 (353)
117 3cai_A Possible aminotransfera 100.0 1.1E-30 3.8E-35 264.9 23.7 293 95-432 70-404 (406)
118 2aeu_A Hypothetical protein MJ 100.0 1.1E-29 3.8E-34 255.2 24.9 299 98-437 58-371 (374)
119 3i4j_A Aminotransferase, class 100.0 1.9E-29 6.7E-34 258.1 27.1 358 45-437 28-428 (430)
120 2eh6_A Acoat, acetylornithine 100.0 3.1E-30 1.1E-34 258.9 20.6 320 45-433 27-374 (375)
121 2bkw_A Alanine-glyoxylate amin 100.0 4.9E-29 1.7E-33 250.7 29.4 296 96-436 40-383 (385)
122 3f0h_A Aminotransferase; RER07 100.0 1.9E-29 6.4E-34 253.2 24.6 299 96-436 50-373 (376)
123 2eo5_A 419AA long hypothetical 100.0 8.1E-29 2.8E-33 252.7 28.2 337 45-436 41-417 (419)
124 3ruy_A Ornithine aminotransfer 100.0 2E-29 7E-34 254.6 22.2 282 96-434 80-391 (392)
125 4adb_A Succinylornithine trans 100.0 7E-29 2.4E-33 251.7 25.1 279 119-440 96-403 (406)
126 2ord_A Acoat, acetylornithine 100.0 1.3E-29 4.5E-34 256.5 19.3 285 98-435 82-395 (397)
127 3vax_A Putative uncharacterize 100.0 2.3E-30 8E-35 261.9 13.4 293 96-436 65-399 (400)
128 2rfv_A Methionine gamma-lyase; 100.0 2.7E-28 9.4E-33 247.1 28.4 280 95-432 65-395 (398)
129 3pj0_A LMO0305 protein; struct 100.0 2.8E-29 9.6E-34 250.3 20.7 327 48-433 15-358 (359)
130 3lws_A Aromatic amino acid bet 100.0 3.4E-29 1.2E-33 249.7 21.1 297 88-434 41-356 (357)
131 2oga_A Transaminase; PLP-depen 100.0 9.4E-29 3.2E-33 250.6 23.6 326 46-438 30-397 (399)
132 3a9z_A Selenocysteine lyase; P 100.0 7.3E-29 2.5E-33 253.8 22.5 294 97-437 64-428 (432)
133 1vef_A Acetylornithine/acetyl- 100.0 3.4E-29 1.2E-33 253.2 18.5 285 96-434 89-394 (395)
134 1b9h_A AHBA synthase, protein 100.0 3.2E-28 1.1E-32 245.5 25.1 298 89-436 33-387 (388)
135 3ffr_A Phosphoserine aminotran 100.0 1.6E-28 5.4E-33 244.7 22.1 288 97-434 42-361 (362)
136 1ax4_A Tryptophanase; tryptoph 100.0 7.3E-28 2.5E-32 249.0 27.8 321 89-438 71-442 (467)
137 3dxv_A Alpha-amino-epsilon-cap 100.0 1.3E-28 4.5E-33 252.7 21.7 349 45-439 42-427 (439)
138 3n0l_A Serine hydroxymethyltra 100.0 1.2E-27 4.1E-32 243.4 27.6 346 47-437 26-389 (417)
139 3n5m_A Adenosylmethionine-8-am 100.0 6.5E-28 2.2E-32 248.5 25.9 353 45-435 48-450 (452)
140 3nx3_A Acoat, acetylornithine 100.0 5.7E-28 2E-32 244.3 24.4 331 45-436 35-394 (395)
141 1zod_A DGD, 2,2-dialkylglycine 100.0 8.3E-28 2.8E-32 246.2 25.7 310 98-436 85-431 (433)
142 1s0a_A Adenosylmethionine-8-am 100.0 9.8E-28 3.4E-32 245.4 26.2 295 97-436 89-423 (429)
143 3ecd_A Serine hydroxymethyltra 100.0 1.7E-27 5.9E-32 242.7 27.7 281 123-437 98-397 (425)
144 2pb2_A Acetylornithine/succiny 100.0 5.4E-28 1.9E-32 246.7 23.9 292 97-437 98-418 (420)
145 1ibj_A CBL, cystathionine beta 100.0 9.8E-28 3.4E-32 247.0 25.5 295 88-436 125-461 (464)
146 2po3_A 4-dehydrase; external a 100.0 7.8E-28 2.7E-32 245.8 24.6 328 50-440 20-389 (424)
147 1mdo_A ARNB aminotransferase; 100.0 1.5E-27 5.2E-32 240.8 25.7 296 92-437 37-386 (393)
148 3gju_A Putative aminotransfera 100.0 2.4E-27 8.1E-32 244.8 27.6 356 44-438 49-457 (460)
149 3mad_A Sphingosine-1-phosphate 100.0 7.5E-28 2.6E-32 252.1 23.7 310 90-440 131-472 (514)
150 1wyu_B Glycine dehydrogenase s 100.0 6.8E-28 2.3E-32 249.7 22.5 303 93-436 102-440 (474)
151 4ffc_A 4-aminobutyrate aminotr 100.0 5.5E-28 1.9E-32 249.0 20.7 359 44-438 62-450 (453)
152 3gbx_A Serine hydroxymethyltra 100.0 1E-27 3.5E-32 243.9 21.5 301 97-438 75-397 (420)
153 4a6r_A Omega transaminase; tra 100.0 1.5E-26 5.1E-31 238.8 30.0 351 45-438 49-450 (459)
154 1cs1_A CGS, protein (cystathio 100.0 2.4E-26 8.3E-31 231.8 30.7 282 94-437 52-383 (386)
155 1w23_A Phosphoserine aminotran 100.0 2.2E-28 7.6E-33 243.8 15.6 286 97-436 47-359 (360)
156 1qz9_A Kynureninase; kynurenin 100.0 1.2E-27 4E-32 243.5 20.3 283 96-438 73-403 (416)
157 1rv3_A Serine hydroxymethyltra 100.0 2.4E-27 8.1E-32 246.0 23.0 343 47-436 45-430 (483)
158 2c0r_A PSAT, phosphoserine ami 100.0 8.4E-28 2.9E-32 240.1 18.3 287 96-437 47-361 (362)
159 3cog_A Cystathionine gamma-lya 100.0 1.4E-26 4.8E-31 234.8 25.6 192 89-324 63-262 (403)
160 3l44_A Glutamate-1-semialdehyd 100.0 4.9E-27 1.7E-31 240.5 22.5 345 44-439 53-432 (434)
161 3mc6_A Sphingosine-1-phosphate 100.0 1.2E-27 4.2E-32 249.4 17.9 312 89-440 98-440 (497)
162 1pff_A Methionine gamma-lyase; 100.0 3E-27 1E-31 233.2 19.7 277 98-432 2-329 (331)
163 3ndn_A O-succinylhomoserine su 99.9 3.2E-26 1.1E-30 232.7 26.5 288 98-434 81-413 (414)
164 3a8u_X Omega-amino acid--pyruv 99.9 5.4E-26 1.9E-30 233.9 28.6 308 96-437 91-447 (449)
165 3dod_A Adenosylmethionine-8-am 99.9 1.2E-26 4E-31 238.8 23.4 348 45-438 43-444 (448)
166 3oks_A 4-aminobutyrate transam 99.9 2.7E-26 9.2E-31 236.3 25.8 355 44-436 59-450 (451)
167 2vi8_A Serine hydroxymethyltra 99.9 1.6E-26 5.3E-31 234.2 22.4 304 96-438 67-388 (405)
168 3tfu_A Adenosylmethionine-8-am 99.9 1.6E-26 5.5E-31 238.2 22.6 301 98-438 118-454 (457)
169 2oat_A Ornithine aminotransfer 99.9 3.3E-26 1.1E-30 234.8 24.4 288 96-436 120-438 (439)
170 3uwc_A Nucleotide-sugar aminot 99.9 1.8E-26 6E-31 231.4 21.9 322 47-437 7-371 (374)
171 3dr4_A Putative perosamine syn 99.9 7.2E-27 2.5E-31 235.9 19.2 324 46-434 22-390 (391)
172 3k28_A Glutamate-1-semialdehyd 99.9 5.9E-27 2E-31 239.7 18.4 340 44-437 51-427 (429)
173 2dgk_A GAD-beta, GADB, glutama 99.9 4E-26 1.4E-30 235.1 24.5 318 89-440 72-437 (452)
174 3h7f_A Serine hydroxymethyltra 99.9 2.7E-26 9.2E-31 236.0 22.6 306 95-439 85-416 (447)
175 3qhx_A Cystathionine gamma-syn 99.9 2.6E-25 8.8E-30 224.7 29.0 281 96-434 68-391 (392)
176 1gc0_A Methionine gamma-lyase; 99.9 2.5E-25 8.6E-30 225.3 28.5 279 95-432 66-396 (398)
177 2fyf_A PSAT, phosphoserine ami 99.9 5.9E-26 2E-30 229.8 23.8 283 97-436 81-397 (398)
178 1z7d_A Ornithine aminotransfer 99.9 1.5E-25 5E-30 229.6 26.6 276 119-437 122-429 (433)
179 3fq8_A Glutamate-1-semialdehyd 99.9 1.7E-26 6E-31 235.9 19.7 335 45-436 51-426 (427)
180 2c81_A Glutamine-2-deoxy-scyll 99.9 2.2E-25 7.6E-30 227.1 27.6 304 89-437 33-414 (418)
181 2fnu_A Aminotransferase; prote 99.9 2.7E-25 9.3E-30 222.6 27.5 290 93-437 31-372 (375)
182 1qgn_A Protein (cystathionine 99.9 7.1E-25 2.4E-29 224.1 30.4 282 96-436 116-444 (445)
183 3i5t_A Aminotransferase; pyrid 99.9 3.6E-25 1.2E-29 229.2 28.2 350 45-440 53-457 (476)
184 2oqx_A Tryptophanase; lyase, p 99.9 7.2E-26 2.5E-30 234.0 22.3 319 89-438 69-443 (467)
185 3e9k_A Kynureninase; kynurenin 99.9 5.4E-26 1.9E-30 234.9 21.1 291 97-437 114-461 (465)
186 2cy8_A D-phgat, D-phenylglycin 99.9 2E-25 7E-30 229.8 25.2 333 45-440 56-438 (453)
187 3acz_A Methionine gamma-lyase; 99.9 6.4E-25 2.2E-29 221.6 28.0 279 95-435 60-387 (389)
188 2cb1_A O-acetyl homoserine sul 99.9 1.5E-24 5.1E-29 220.6 30.1 284 89-431 49-410 (412)
189 2e7u_A Glutamate-1-semialdehyd 99.9 2.9E-25 9.7E-30 226.8 24.4 328 45-433 51-423 (424)
190 3hmu_A Aminotransferase, class 99.9 6.7E-25 2.3E-29 226.9 26.6 348 45-438 54-453 (472)
191 1n8p_A Cystathionine gamma-lya 99.9 3.8E-25 1.3E-29 223.6 23.8 282 95-433 56-391 (393)
192 1o69_A Aminotransferase; struc 99.9 2.8E-24 9.7E-29 217.2 30.2 302 90-436 26-386 (394)
193 2epj_A Glutamate-1-semialdehyd 99.9 6.6E-25 2.3E-29 224.7 24.2 333 45-437 55-431 (434)
194 3frk_A QDTB; aminotransferase, 99.9 3.4E-25 1.2E-29 222.1 21.0 296 89-436 31-367 (373)
195 1js3_A DDC;, DOPA decarboxylas 99.9 9.6E-25 3.3E-29 226.8 25.0 324 89-442 104-479 (486)
196 2okj_A Glutamate decarboxylase 99.9 2.3E-24 8E-29 224.9 26.6 322 90-436 124-501 (504)
197 3nyt_A Aminotransferase WBPE; 99.9 1.9E-24 6.4E-29 216.4 24.2 289 89-433 30-360 (367)
198 3hbx_A GAD 1, glutamate decarb 99.9 1.6E-24 5.5E-29 225.7 24.1 316 92-440 89-447 (502)
199 3ri6_A O-acetylhomoserine sulf 99.9 8.6E-25 3E-29 222.8 21.5 280 96-434 84-429 (430)
200 4e77_A Glutamate-1-semialdehyd 99.9 2.4E-24 8.2E-29 220.2 24.7 342 44-436 51-428 (429)
201 2x3l_A ORN/Lys/Arg decarboxyla 99.9 1.3E-25 4.5E-30 230.6 13.8 287 92-437 55-353 (446)
202 2cjg_A L-lysine-epsilon aminot 99.9 1.8E-24 6E-29 222.6 21.2 294 97-436 104-447 (449)
203 3vp6_A Glutamate decarboxylase 99.9 3.3E-23 1.1E-27 216.2 30.6 325 88-436 125-504 (511)
204 2z67_A O-phosphoseryl-tRNA(SEC 99.9 1.4E-23 4.9E-28 216.2 25.1 303 96-434 131-455 (456)
205 3ke3_A Putative serine-pyruvat 99.9 1.1E-22 3.9E-27 204.4 31.0 301 97-438 34-377 (379)
206 2qma_A Diaminobutyrate-pyruvat 99.9 1.1E-23 3.9E-28 219.4 24.0 315 90-436 132-495 (497)
207 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 6.1E-23 2.1E-27 210.3 26.9 294 90-435 58-434 (437)
208 3nmy_A Xometc, cystathionine g 99.9 6.3E-23 2.2E-27 207.4 25.8 282 96-435 69-397 (400)
209 2jis_A Cysteine sulfinic acid 99.9 1E-22 3.5E-27 213.1 28.0 320 89-435 139-513 (515)
210 2fq6_A Cystathionine beta-lyas 99.9 5.6E-23 1.9E-27 208.6 24.6 282 96-431 84-412 (415)
211 2a7v_A Serine hydroxymethyltra 99.9 1.3E-22 4.3E-27 209.2 26.5 302 97-437 99-441 (490)
212 3k40_A Aromatic-L-amino-acid d 99.9 1.7E-22 5.7E-27 209.1 24.5 322 89-439 104-473 (475)
213 4e1o_A HDC, histidine decarbox 99.9 3.4E-22 1.2E-26 207.2 26.4 322 88-437 108-478 (481)
214 3ju7_A Putative PLP-dependent 99.9 4.2E-22 1.4E-26 200.0 24.2 294 95-437 37-375 (377)
215 2ctz_A O-acetyl-L-homoserine s 99.9 2.4E-21 8.1E-26 197.5 28.1 156 96-293 60-221 (421)
216 1wyu_A Glycine dehydrogenase ( 99.9 1.4E-22 4.7E-27 207.8 17.1 287 95-434 105-437 (438)
217 3i16_A Aluminum resistance pro 99.9 3.5E-22 1.2E-26 202.7 19.7 257 88-392 68-355 (427)
218 3b8x_A WBDK, pyridoxamine 5-ph 99.9 1E-20 3.4E-25 190.8 29.0 290 90-430 30-389 (390)
219 3jzl_A Putative cystathionine 99.9 7.9E-22 2.7E-26 199.4 20.9 254 88-392 54-338 (409)
220 3hvy_A Cystathionine beta-lyas 99.9 1.1E-21 3.7E-26 199.1 20.6 254 88-391 69-354 (427)
221 1c4k_A Protein (ornithine deca 99.9 8.9E-22 3.1E-26 211.6 20.3 309 96-438 175-567 (730)
222 1ohv_A 4-aminobutyrate aminotr 99.9 1.6E-21 5.4E-26 201.6 21.0 345 44-436 61-470 (472)
223 3ht4_A Aluminum resistance pro 99.9 5.7E-21 1.9E-25 194.6 19.3 253 100-392 67-344 (431)
224 2vyc_A Biodegradative arginine 99.9 1E-20 3.4E-25 205.2 20.7 180 96-295 207-402 (755)
225 2yky_A Beta-transaminase; tran 99.8 2.3E-23 7.9E-28 213.5 0.0 335 43-438 97-461 (465)
226 3n75_A LDC, lysine decarboxyla 99.8 7.8E-19 2.7E-23 187.3 19.4 175 96-295 197-383 (715)
227 3e77_A Phosphoserine aminotran 99.7 6E-17 2E-21 161.3 16.4 289 96-437 60-375 (377)
228 3qm2_A Phosphoserine aminotran 99.7 1.1E-16 3.9E-21 160.2 17.7 287 95-437 73-385 (386)
229 3m5u_A Phosphoserine aminotran 99.7 1.5E-15 5.2E-20 150.6 21.8 282 96-437 52-360 (361)
230 3hl2_A O-phosphoseryl-tRNA(SEC 99.7 3.2E-14 1.1E-18 141.7 27.8 319 98-442 116-466 (501)
231 3ou5_A Serine hydroxymethyltra 99.6 4.3E-14 1.5E-18 140.1 24.5 305 96-437 98-441 (490)
232 4ao9_A Beta-phenylalanine amin 99.6 2.6E-14 9.1E-19 145.3 23.4 296 96-439 129-448 (454)
233 4atq_A 4-aminobutyrate transam 99.5 1.6E-12 5.5E-17 132.7 25.0 300 119-437 125-455 (456)
234 4e3q_A Pyruvate transaminase; 99.5 9.3E-12 3.2E-16 127.5 28.5 309 97-439 110-470 (473)
235 3bc8_A O-phosphoseryl-tRNA(SEC 99.5 5.1E-11 1.7E-15 120.1 32.7 320 96-439 96-445 (450)
236 4a0g_A Adenosylmethionine-8-am 99.5 9E-13 3.1E-17 143.9 18.1 231 184-437 577-828 (831)
237 4fgs_A Probable dehydrogenase 83.0 8.2 0.00028 35.7 10.6 101 120-228 30-134 (273)
238 3rwb_A TPLDH, pyridoxal 4-dehy 78.0 16 0.00055 32.8 10.8 102 119-227 6-110 (247)
239 4fn4_A Short chain dehydrogena 76.6 22 0.00075 32.3 11.1 101 120-228 8-116 (254)
240 4dqx_A Probable oxidoreductase 76.0 22 0.00075 32.6 11.2 103 118-227 26-131 (277)
241 3gh5_A HEX1, beta-hexosaminida 75.1 12 0.00039 38.2 9.5 112 115-237 126-274 (525)
242 4g81_D Putative hexonate dehyd 74.9 27 0.00094 31.7 11.3 103 118-228 8-117 (255)
243 4e6p_A Probable sorbitol dehyd 74.6 26 0.00089 31.5 11.2 103 119-227 8-112 (259)
244 2gjx_A Beta-hexosaminidase alp 73.3 10 0.00036 38.4 8.7 108 115-237 96-233 (507)
245 2o23_A HADH2 protein; HSD17B10 73.2 45 0.0015 29.8 12.5 82 119-206 12-93 (265)
246 4eso_A Putative oxidoreductase 73.1 25 0.00085 31.7 10.7 103 118-227 7-112 (255)
247 3ppi_A 3-hydroxyacyl-COA dehyd 72.5 31 0.0011 31.4 11.3 102 119-227 30-139 (281)
248 3tpc_A Short chain alcohol deh 72.5 24 0.00083 31.7 10.5 102 119-227 7-115 (257)
249 1jak_A Beta-N-acetylhexosamini 72.4 12 0.00042 37.9 9.0 112 115-237 102-249 (512)
250 3gem_A Short chain dehydrogena 71.9 31 0.0011 31.2 11.0 100 118-226 26-127 (260)
251 3l6e_A Oxidoreductase, short-c 71.4 25 0.00084 31.2 10.1 101 121-227 5-107 (235)
252 3grp_A 3-oxoacyl-(acyl carrier 70.6 23 0.00078 32.2 9.8 101 119-226 27-130 (266)
253 3gvc_A Oxidoreductase, probabl 70.0 23 0.00078 32.5 9.7 100 120-227 30-133 (277)
254 3n74_A 3-ketoacyl-(acyl-carrie 69.9 36 0.0012 30.4 11.1 103 118-227 8-114 (261)
255 3h7a_A Short chain dehydrogena 69.1 63 0.0022 28.8 13.4 101 119-227 7-113 (252)
256 2ew8_A (S)-1-phenylethanol deh 69.1 51 0.0018 29.3 11.8 101 120-227 8-112 (249)
257 3m1a_A Putative dehydrogenase; 68.8 23 0.00079 32.3 9.5 100 121-227 7-109 (281)
258 3tzq_B Short-chain type dehydr 67.5 51 0.0018 29.8 11.6 102 119-227 11-117 (271)
259 3pxx_A Carveol dehydrogenase; 67.4 25 0.00086 32.1 9.5 102 119-227 10-127 (287)
260 3ged_A Short-chain dehydrogena 66.9 32 0.0011 31.1 9.7 100 121-228 4-106 (247)
261 3op4_A 3-oxoacyl-[acyl-carrier 65.1 35 0.0012 30.5 9.8 102 119-227 9-113 (248)
262 1now_A Beta-hexosaminidase bet 64.6 17 0.00058 36.9 8.1 107 115-237 102-238 (507)
263 3sc4_A Short chain dehydrogena 64.3 85 0.0029 28.5 13.3 103 118-227 8-123 (285)
264 3kvo_A Hydroxysteroid dehydrog 64.3 98 0.0034 29.3 13.4 101 119-226 45-158 (346)
265 4fc7_A Peroxisomal 2,4-dienoyl 64.0 69 0.0023 29.0 11.8 102 120-227 28-135 (277)
266 3lyl_A 3-oxoacyl-(acyl-carrier 64.0 67 0.0023 28.3 11.5 102 120-227 6-112 (247)
267 3rih_A Short chain dehydrogena 63.8 74 0.0025 29.2 12.0 101 120-227 42-149 (293)
268 1hxh_A 3BETA/17BETA-hydroxyste 62.7 58 0.002 29.0 10.9 101 120-227 7-110 (253)
269 3t7c_A Carveol dehydrogenase; 62.6 71 0.0024 29.4 11.7 103 118-227 27-148 (299)
270 1uls_A Putative 3-oxoacyl-acyl 62.0 61 0.0021 28.7 10.8 99 120-227 6-107 (245)
271 3rkr_A Short chain oxidoreduct 61.8 72 0.0024 28.6 11.4 101 120-227 30-137 (262)
272 4gkb_A 3-oxoacyl-[acyl-carrier 61.7 92 0.0032 28.1 11.9 100 121-227 8-112 (258)
273 4ibo_A Gluconate dehydrogenase 61.3 67 0.0023 29.1 11.1 103 118-227 25-133 (271)
274 3r1i_A Short-chain type dehydr 60.7 83 0.0029 28.5 11.7 103 118-227 31-139 (276)
275 3sx2_A Putative 3-ketoacyl-(ac 60.5 77 0.0026 28.6 11.4 99 119-226 13-127 (278)
276 4dyv_A Short-chain dehydrogena 60.5 50 0.0017 30.0 10.1 100 121-227 29-133 (272)
277 3sju_A Keto reductase; short-c 60.4 65 0.0022 29.3 10.9 101 120-227 25-131 (279)
278 3l77_A Short-chain alcohol deh 60.4 38 0.0013 29.8 9.0 101 121-227 4-110 (235)
279 3dii_A Short-chain dehydrogena 60.2 53 0.0018 29.2 10.0 99 121-227 4-105 (247)
280 3gaf_A 7-alpha-hydroxysteroid 59.9 68 0.0023 28.7 10.8 103 118-227 11-118 (256)
281 1c7s_A Beta-N-acetylhexosamini 59.8 14 0.00049 39.9 6.7 115 117-237 266-418 (858)
282 3tjr_A Short chain dehydrogena 59.1 79 0.0027 29.1 11.3 102 119-227 31-138 (301)
283 1hdc_A 3-alpha, 20 beta-hydrox 58.8 66 0.0023 28.7 10.5 101 120-227 6-109 (254)
284 3imf_A Short chain dehydrogena 58.5 76 0.0026 28.3 10.9 101 120-227 7-113 (257)
285 3ucx_A Short chain dehydrogena 58.5 86 0.003 28.1 11.3 103 118-227 10-119 (264)
286 3uve_A Carveol dehydrogenase ( 58.3 82 0.0028 28.6 11.2 103 118-227 10-135 (286)
287 3tfo_A Putative 3-oxoacyl-(acy 58.1 81 0.0028 28.5 11.0 99 121-227 6-111 (264)
288 3ozo_A N-acetylglucosaminidase 58.0 40 0.0014 34.6 9.5 101 121-237 142-274 (572)
289 3e03_A Short chain dehydrogena 57.9 1.1E+02 0.0037 27.6 13.1 102 118-226 5-119 (274)
290 1nff_A Putative oxidoreductase 56.7 86 0.0029 28.0 10.9 102 119-227 7-111 (260)
291 3v2h_A D-beta-hydroxybutyrate 56.3 1.2E+02 0.004 27.5 11.9 103 119-227 25-134 (281)
292 2a4k_A 3-oxoacyl-[acyl carrier 56.1 65 0.0022 29.0 10.0 101 120-226 7-109 (263)
293 3s55_A Putative short-chain de 55.8 1.1E+02 0.0038 27.6 11.7 102 119-227 10-129 (281)
294 3tsc_A Putative oxidoreductase 55.5 59 0.002 29.4 9.7 102 119-227 11-131 (277)
295 3ijr_A Oxidoreductase, short c 55.0 1.2E+02 0.0043 27.5 11.9 103 118-227 46-156 (291)
296 4egf_A L-xylulose reductase; s 54.5 72 0.0025 28.7 10.0 102 120-227 21-128 (266)
297 2jah_A Clavulanic acid dehydro 54.5 1.1E+02 0.0038 26.9 11.2 102 119-227 7-114 (247)
298 3oid_A Enoyl-[acyl-carrier-pro 54.5 93 0.0032 27.8 10.7 99 121-227 6-112 (258)
299 3is3_A 17BETA-hydroxysteroid d 54.4 49 0.0017 29.9 8.8 100 120-227 19-126 (270)
300 3lf2_A Short chain oxidoreduct 53.9 91 0.0031 27.9 10.6 104 118-227 7-117 (265)
301 4dmm_A 3-oxoacyl-[acyl-carrier 53.5 55 0.0019 29.6 9.1 103 118-227 27-136 (269)
302 1geg_A Acetoin reductase; SDR 53.5 1.1E+02 0.0038 27.1 11.1 100 121-227 4-109 (256)
303 3v2g_A 3-oxoacyl-[acyl-carrier 53.4 72 0.0025 28.8 9.8 104 117-227 29-139 (271)
304 1vl8_A Gluconate 5-dehydrogena 53.3 1.1E+02 0.0038 27.4 11.1 102 119-227 21-129 (267)
305 4iin_A 3-ketoacyl-acyl carrier 52.7 1.2E+02 0.0042 27.1 11.4 105 117-227 27-137 (271)
306 3ak4_A NADH-dependent quinucli 52.7 92 0.0031 27.8 10.4 102 119-227 12-116 (263)
307 3edm_A Short chain dehydrogena 52.6 1.3E+02 0.0043 26.8 12.3 103 118-227 7-117 (259)
308 3qlj_A Short chain dehydrogena 52.4 75 0.0026 29.6 10.0 99 121-227 29-144 (322)
309 2wsb_A Galactitol dehydrogenas 51.5 1.2E+02 0.0042 26.5 11.1 102 118-226 10-114 (254)
310 3gdg_A Probable NADP-dependent 51.5 84 0.0029 28.0 10.0 104 118-227 19-131 (267)
311 2epl_X N-acetyl-beta-D-glucosa 51.3 1.2E+02 0.004 31.6 11.8 110 115-237 41-163 (627)
312 3v8b_A Putative dehydrogenase, 51.3 1.3E+02 0.0046 27.2 11.4 103 119-227 28-136 (283)
313 3oec_A Carveol dehydrogenase ( 51.1 1.2E+02 0.0041 28.1 11.2 101 120-227 47-165 (317)
314 3osu_A 3-oxoacyl-[acyl-carrier 50.8 1.3E+02 0.0044 26.5 11.0 100 121-227 6-112 (246)
315 3qiv_A Short-chain dehydrogena 50.7 1.2E+02 0.004 26.8 10.8 103 118-227 8-119 (253)
316 3ai3_A NADPH-sorbose reductase 50.7 1.3E+02 0.0046 26.6 11.6 103 118-226 6-114 (263)
317 1yb1_A 17-beta-hydroxysteroid 50.3 1.3E+02 0.0046 26.9 11.2 83 118-206 30-115 (272)
318 3pgx_A Carveol dehydrogenase; 50.3 74 0.0025 28.8 9.4 102 119-227 15-135 (280)
319 3ezl_A Acetoacetyl-COA reducta 50.2 1.3E+02 0.0046 26.4 11.4 102 119-227 12-121 (256)
320 1zk4_A R-specific alcohol dehy 50.2 1.2E+02 0.0043 26.4 10.8 103 120-227 7-112 (251)
321 3pk0_A Short-chain dehydrogena 49.7 1E+02 0.0036 27.5 10.3 104 118-227 9-118 (262)
322 3ftp_A 3-oxoacyl-[acyl-carrier 49.5 1E+02 0.0035 27.8 10.2 100 120-227 29-135 (270)
323 1x1t_A D(-)-3-hydroxybutyrate 48.9 1.4E+02 0.0048 26.4 11.0 101 121-227 6-113 (260)
324 3u9l_A 3-oxoacyl-[acyl-carrier 48.7 1E+02 0.0034 28.8 10.2 100 121-227 7-117 (324)
325 1w6u_A 2,4-dienoyl-COA reducta 48.4 1.6E+02 0.0054 26.7 11.6 102 120-226 27-133 (302)
326 2pnf_A 3-oxoacyl-[acyl-carrier 48.4 1.4E+02 0.0047 26.0 11.4 103 119-226 7-114 (248)
327 3o38_A Short chain dehydrogena 48.4 96 0.0033 27.7 9.8 104 118-227 21-131 (266)
328 2q5c_A NTRC family transcripti 48.2 1.3E+02 0.0045 25.8 13.1 92 97-211 14-106 (196)
329 3i1j_A Oxidoreductase, short c 48.1 1.4E+02 0.0048 26.1 10.9 102 120-227 15-125 (247)
330 3zv4_A CIS-2,3-dihydrobiphenyl 48.1 43 0.0015 30.6 7.4 83 119-208 5-87 (281)
331 2rhc_B Actinorhodin polyketide 48.1 1.5E+02 0.0053 26.6 11.5 100 120-226 23-128 (277)
332 1i2a_A 50S ribosomal protein L 48.1 31 0.001 30.6 6.0 58 407-482 156-215 (219)
333 3a28_C L-2.3-butanediol dehydr 47.7 1.1E+02 0.0038 27.1 10.1 100 121-227 4-111 (258)
334 4imr_A 3-oxoacyl-(acyl-carrier 47.4 1.6E+02 0.0055 26.5 11.6 102 118-227 32-139 (275)
335 1iy8_A Levodione reductase; ox 47.0 1.5E+02 0.0052 26.3 11.0 102 120-227 14-123 (267)
336 3ek2_A Enoyl-(acyl-carrier-pro 46.9 1.1E+02 0.0038 27.2 10.0 102 118-227 13-127 (271)
337 3nyw_A Putative oxidoreductase 46.7 1.2E+02 0.004 26.9 10.0 101 120-226 8-115 (250)
338 1yde_A Retinal dehydrogenase/r 45.7 1.7E+02 0.0057 26.2 11.0 100 119-226 9-112 (270)
339 2ehd_A Oxidoreductase, oxidore 45.5 1.3E+02 0.0045 26.0 10.1 99 121-226 7-107 (234)
340 3u5t_A 3-oxoacyl-[acyl-carrier 45.3 1.7E+02 0.0058 26.2 11.4 101 120-227 28-135 (267)
341 3rd5_A Mypaa.01249.C; ssgcid, 45.0 54 0.0018 30.0 7.6 79 119-208 16-94 (291)
342 1yxm_A Pecra, peroxisomal tran 44.9 1.8E+02 0.0061 26.4 11.4 102 119-226 18-129 (303)
343 3cxt_A Dehydrogenase with diff 44.9 1.8E+02 0.0062 26.4 11.3 103 118-227 33-141 (291)
344 3r3s_A Oxidoreductase; structu 44.8 1.6E+02 0.0054 26.9 10.8 102 119-227 49-159 (294)
345 3ioy_A Short-chain dehydrogena 44.8 1.3E+02 0.0046 27.8 10.4 102 119-227 8-117 (319)
346 2x9g_A PTR1, pteridine reducta 44.7 1.1E+02 0.0038 27.7 9.7 85 121-208 25-114 (288)
347 3ksu_A 3-oxoacyl-acyl carrier 44.6 1.7E+02 0.0058 26.0 13.9 103 118-227 10-121 (262)
348 3nrc_A Enoyl-[acyl-carrier-pro 44.4 1.8E+02 0.006 26.2 11.4 102 119-227 26-138 (280)
349 2c07_A 3-oxoacyl-(acyl-carrier 44.0 1.8E+02 0.0062 26.2 12.9 101 120-226 45-150 (285)
350 2cfc_A 2-(R)-hydroxypropyl-COM 43.8 1.4E+02 0.0049 26.0 10.1 101 121-226 4-112 (250)
351 3awd_A GOX2181, putative polyo 43.4 1.7E+02 0.0058 25.7 11.8 103 118-226 12-120 (260)
352 2b4q_A Rhamnolipids biosynthes 43.0 1.9E+02 0.0064 26.0 11.3 102 119-227 29-135 (276)
353 2uvd_A 3-oxoacyl-(acyl-carrier 43.0 1.7E+02 0.0059 25.6 10.8 99 121-227 6-112 (246)
354 2q2v_A Beta-D-hydroxybutyrate 42.9 1.8E+02 0.006 25.7 11.3 99 121-226 6-108 (255)
355 2pju_A Propionate catabolism o 42.3 1.8E+02 0.0061 25.6 12.0 96 96-210 21-117 (225)
356 2yxg_A DHDPS, dihydrodipicolin 41.6 1.7E+02 0.0059 26.8 10.5 97 97-225 52-151 (289)
357 3gk3_A Acetoacetyl-COA reducta 41.6 1.8E+02 0.0063 25.8 10.6 101 121-227 26-133 (269)
358 3rjz_A N-type ATP pyrophosphat 40.4 1.2E+02 0.0042 27.0 8.8 100 121-236 7-120 (237)
359 1xky_A Dihydrodipicolinate syn 40.1 2.1E+02 0.0073 26.3 10.9 108 97-239 64-174 (301)
360 2ehh_A DHDPS, dihydrodipicolin 39.8 2.2E+02 0.0077 26.0 11.2 97 97-225 52-151 (294)
361 2vc6_A MOSA, dihydrodipicolina 39.8 2.2E+02 0.0076 26.0 10.9 79 121-226 71-152 (292)
362 3svt_A Short-chain type dehydr 39.8 2.1E+02 0.0071 25.7 11.9 104 118-227 10-122 (281)
363 4e3z_A Putative oxidoreductase 39.2 2.1E+02 0.0071 25.5 11.1 100 121-227 27-135 (272)
364 2wkj_A N-acetylneuraminate lya 39.1 1.5E+02 0.005 27.5 9.6 98 97-226 63-164 (303)
365 1zem_A Xylitol dehydrogenase; 38.9 2.1E+02 0.007 25.4 11.4 102 119-227 7-115 (262)
366 3guy_A Short-chain dehydrogena 38.5 82 0.0028 27.4 7.5 97 121-227 3-102 (230)
367 3tox_A Short chain dehydrogena 38.4 2.2E+02 0.0076 25.6 10.7 101 120-227 9-116 (280)
368 1spx_A Short-chain reductase f 37.5 1.6E+02 0.0055 26.3 9.5 81 121-208 8-94 (278)
369 1xhl_A Short-chain dehydrogena 37.5 2.2E+02 0.0075 25.9 10.6 101 120-227 27-138 (297)
370 1h5q_A NADP-dependent mannitol 37.5 2.1E+02 0.0072 25.1 12.0 101 120-226 15-121 (265)
371 1xkq_A Short-chain reductase f 37.4 2.2E+02 0.0076 25.4 10.5 102 120-227 7-120 (280)
372 1ae1_A Tropinone reductase-I; 37.3 2.2E+02 0.0077 25.3 12.3 102 119-227 21-129 (273)
373 2ojp_A DHDPS, dihydrodipicolin 37.0 2.1E+02 0.0073 26.1 10.3 78 121-226 72-153 (292)
374 3cpr_A Dihydrodipicolinate syn 36.6 1.5E+02 0.0052 27.4 9.2 56 178-236 31-89 (304)
375 3f9i_A 3-oxoacyl-[acyl-carrier 36.5 1E+02 0.0035 27.1 7.9 80 118-208 13-92 (249)
376 1xg5_A ARPG836; short chain de 36.4 2.3E+02 0.0079 25.2 11.1 102 119-226 32-140 (279)
377 3qp9_A Type I polyketide synth 36.4 2E+02 0.0068 29.0 10.8 104 117-227 248-372 (525)
378 3l21_A DHDPS, dihydrodipicolin 36.1 1.3E+02 0.0045 27.9 8.7 57 178-237 30-89 (304)
379 1ja9_A 4HNR, 1,3,6,8-tetrahydr 36.0 2.3E+02 0.0078 25.0 10.5 101 120-226 22-128 (274)
380 3asu_A Short-chain dehydrogena 35.9 1.1E+02 0.0036 27.2 7.9 98 122-227 3-105 (248)
381 2dtx_A Glucose 1-dehydrogenase 35.8 2.3E+02 0.008 25.1 10.4 94 119-227 8-104 (264)
382 3tl3_A Short-chain type dehydr 35.8 93 0.0032 27.7 7.5 97 120-227 10-113 (257)
383 2rfg_A Dihydrodipicolinate syn 35.4 1.8E+02 0.0063 26.7 9.6 79 121-226 71-152 (297)
384 2pd6_A Estradiol 17-beta-dehyd 35.3 2.3E+02 0.0078 24.8 10.5 102 119-226 7-121 (264)
385 2bgk_A Rhizome secoisolaricire 34.4 2.4E+02 0.0084 24.9 11.4 101 120-226 17-123 (278)
386 2r8w_A AGR_C_1641P; APC7498, d 34.3 1.8E+02 0.0061 27.3 9.4 90 121-240 105-197 (332)
387 1vhx_A Putative holliday junct 34.2 61 0.0021 26.7 5.3 59 179-242 40-101 (150)
388 4iiu_A 3-oxoacyl-[acyl-carrier 34.1 2.5E+02 0.0085 24.9 10.9 101 120-227 27-134 (267)
389 1fmc_A 7 alpha-hydroxysteroid 33.9 2.4E+02 0.0081 24.6 11.9 102 119-226 11-116 (255)
390 2yvq_A Carbamoyl-phosphate syn 33.7 1.6E+02 0.0055 23.7 7.9 103 121-237 26-130 (143)
391 3kzv_A Uncharacterized oxidore 33.7 2.1E+02 0.0072 25.2 9.6 99 122-227 4-109 (254)
392 3i4f_A 3-oxoacyl-[acyl-carrier 33.6 2E+02 0.0067 25.4 9.4 100 121-227 9-117 (264)
393 4a29_A Engineered retro-aldol 33.6 63 0.0022 29.3 5.6 81 145-241 81-161 (258)
394 2hmc_A AGR_L_411P, dihydrodipi 33.6 1.8E+02 0.0063 27.5 9.3 77 121-224 94-174 (344)
395 3fkr_A L-2-keto-3-deoxyarabona 33.5 2.9E+02 0.01 25.5 12.0 93 121-240 79-174 (309)
396 2wkj_A N-acetylneuraminate lya 33.1 1.6E+02 0.0054 27.3 8.7 57 178-237 26-85 (303)
397 3zu3_A Putative reductase YPO4 32.9 3.5E+02 0.012 26.2 13.9 82 120-208 47-145 (405)
398 3ruf_A WBGU; rossmann fold, UD 32.9 2.1E+02 0.0073 26.4 9.9 76 118-207 24-108 (351)
399 2zcu_A Uncharacterized oxidore 32.9 1.5E+02 0.0051 26.4 8.5 92 122-232 2-95 (286)
400 1bqc_A Protein (beta-mannanase 32.8 90 0.0031 28.6 7.0 21 218-238 64-84 (302)
401 2z1n_A Dehydrogenase; reductas 32.7 2.6E+02 0.0088 24.6 11.6 100 120-226 8-114 (260)
402 4dry_A 3-oxoacyl-[acyl-carrier 32.7 2E+02 0.007 25.9 9.4 101 121-227 34-142 (281)
403 2yl5_A Beta-N-acetylhexosamini 32.4 33 0.0011 34.0 4.0 29 209-237 85-113 (442)
404 2d1y_A Hypothetical protein TT 32.2 2.6E+02 0.0089 24.6 11.9 97 120-226 7-106 (256)
405 1edo_A Beta-keto acyl carrier 32.2 2.5E+02 0.0084 24.3 11.2 98 122-226 4-108 (244)
406 4b79_A PA4098, probable short- 32.1 1.6E+02 0.0055 26.3 8.3 93 121-228 13-107 (242)
407 3s5o_A 4-hydroxy-2-oxoglutarat 32.1 78 0.0027 29.5 6.4 61 172-237 25-88 (307)
408 3afn_B Carbonyl reductase; alp 32.1 2.5E+02 0.0086 24.4 11.8 101 120-226 8-115 (258)
409 1y80_A Predicted cobalamin bin 31.6 2.4E+02 0.0084 24.1 9.3 53 164-232 115-167 (210)
410 2bd0_A Sepiapterin reductase; 31.5 2.5E+02 0.0087 24.2 10.4 101 121-226 4-115 (244)
411 1cyd_A Carbonyl reductase; sho 30.9 2.6E+02 0.0088 24.1 9.6 98 118-226 6-105 (244)
412 3dz1_A Dihydrodipicolinate syn 30.8 1.3E+02 0.0043 28.1 7.6 57 178-237 23-81 (313)
413 1u83_A Phosphosulfolactate syn 30.7 2E+02 0.007 26.2 8.5 110 99-241 82-194 (276)
414 3d3w_A L-xylulose reductase; u 30.6 2.6E+02 0.009 24.1 9.6 97 118-226 6-105 (244)
415 3i6i_A Putative leucoanthocyan 30.5 2.1E+02 0.0071 26.5 9.3 103 120-242 11-121 (346)
416 1g0o_A Trihydroxynaphthalene r 30.4 3E+02 0.01 24.6 11.0 100 120-227 30-137 (283)
417 3cpr_A Dihydrodipicolinate syn 29.9 3.1E+02 0.011 25.2 10.2 98 97-226 68-168 (304)
418 2ae2_A Protein (tropinone redu 29.7 2.9E+02 0.0099 24.3 12.3 103 118-227 8-117 (260)
419 1yht_A DSPB; beta barrel, hydr 29.6 31 0.0011 33.2 3.2 69 159-237 41-113 (367)
420 3rku_A Oxidoreductase YMR226C; 29.5 1.7E+02 0.0057 26.6 8.2 101 120-227 34-146 (287)
421 2ekp_A 2-deoxy-D-gluconate 3-d 29.5 2.7E+02 0.0093 24.1 9.5 94 121-227 4-100 (239)
422 4gqr_A Pancreatic alpha-amylas 29.4 33 0.0011 34.0 3.5 27 217-243 75-101 (496)
423 2ya0_A Putative alkaline amylo 29.4 29 0.00099 36.8 3.2 27 217-243 253-279 (714)
424 2yl6_A Beta-N-acetylhexosamini 29.2 32 0.0011 34.0 3.2 28 210-237 83-110 (434)
425 2nly_A BH1492 protein, diverge 29.1 1.3E+02 0.0044 27.0 7.0 55 180-240 79-135 (245)
426 4dpp_A DHDPS 2, dihydrodipicol 29.0 2.1E+02 0.0071 27.3 8.8 57 178-237 74-133 (360)
427 1xq1_A Putative tropinone redu 28.8 3E+02 0.01 24.1 10.5 102 120-227 15-122 (266)
428 3og9_A Protein YAHD A copper i 28.6 2.5E+02 0.0086 23.3 11.3 108 117-231 99-208 (209)
429 1f6k_A N-acetylneuraminate lya 28.4 3E+02 0.01 25.1 9.7 98 97-226 56-156 (293)
430 1yo6_A Putative carbonyl reduc 28.2 2.9E+02 0.0098 23.8 10.8 101 121-227 5-112 (250)
431 3fkr_A L-2-keto-3-deoxyarabona 28.0 72 0.0025 29.8 5.3 51 178-231 23-73 (309)
432 3qze_A DHDPS, dihydrodipicolin 28.0 3.6E+02 0.012 24.9 10.8 99 96-226 74-175 (314)
433 1w3i_A EDA, 2-keto-3-deoxy glu 27.9 1.5E+02 0.0051 27.3 7.5 51 178-231 14-64 (293)
434 3m5v_A DHDPS, dihydrodipicolin 27.9 1.3E+02 0.0043 27.9 7.0 57 178-237 22-82 (301)
435 2nu8_A Succinyl-COA ligase [AD 27.9 98 0.0034 28.5 6.2 76 150-242 50-125 (288)
436 3ctm_A Carbonyl reductase; alc 27.7 2.1E+02 0.0073 25.4 8.6 83 118-206 33-118 (279)
437 1i4n_A Indole-3-glycerol phosp 27.6 91 0.0031 28.2 5.7 23 216-238 134-156 (251)
438 3f1l_A Uncharacterized oxidore 27.6 3.1E+02 0.011 24.0 11.6 104 120-227 13-123 (252)
439 1gee_A Glucose 1-dehydrogenase 27.6 3.1E+02 0.011 23.9 11.1 101 120-226 8-114 (261)
440 2nuw_A 2-keto-3-deoxygluconate 27.6 1.4E+02 0.0048 27.4 7.2 51 178-231 14-64 (288)
441 1xky_A Dihydrodipicolinate syn 27.5 1.8E+02 0.0061 26.9 8.0 51 178-231 27-77 (301)
442 4dzz_A Plasmid partitioning pr 27.5 1.6E+02 0.0054 24.7 7.3 30 126-155 59-88 (206)
443 3flu_A DHDPS, dihydrodipicolin 27.5 1.7E+02 0.0057 27.0 7.8 57 178-237 22-81 (297)
444 2hq1_A Glucose/ribitol dehydro 26.9 2.8E+02 0.0095 23.9 9.1 81 120-206 6-90 (247)
445 3un1_A Probable oxidoreductase 26.8 2.5E+02 0.0086 24.8 8.8 95 120-227 29-126 (260)
446 3b4u_A Dihydrodipicolinate syn 26.7 1.6E+02 0.0054 27.1 7.4 61 168-231 8-68 (294)
447 1e7w_A Pteridine reductase; di 26.7 3E+02 0.01 24.8 9.4 30 120-150 10-40 (291)
448 2fwm_X 2,3-dihydro-2,3-dihydro 26.7 3.2E+02 0.011 23.8 11.6 95 119-227 7-104 (250)
449 3a5f_A Dihydrodipicolinate syn 26.7 2E+02 0.0069 26.3 8.2 99 96-226 52-153 (291)
450 3k31_A Enoyl-(acyl-carrier-pro 26.7 3.6E+02 0.012 24.4 10.0 102 118-227 29-142 (296)
451 2ph3_A 3-oxoacyl-[acyl carrier 26.5 3.1E+02 0.011 23.6 10.5 99 122-226 4-109 (245)
452 2jl1_A Triphenylmethane reduct 26.5 2.4E+02 0.0081 25.1 8.7 95 122-233 3-99 (287)
453 3h5d_A DHDPS, dihydrodipicolin 26.5 3.9E+02 0.013 24.7 10.9 99 96-226 58-160 (311)
454 1mxh_A Pteridine reductase 2; 26.4 3E+02 0.01 24.4 9.4 81 121-208 13-102 (276)
455 1xp8_A RECA protein, recombina 26.3 2.5E+02 0.0084 26.8 8.9 25 389-416 293-317 (366)
456 3uf0_A Short-chain dehydrogena 26.1 3.5E+02 0.012 24.1 12.3 102 117-227 29-136 (273)
457 4da9_A Short-chain dehydrogena 26.0 2E+02 0.007 25.8 8.1 81 120-206 30-114 (280)
458 3mje_A AMPHB; rossmann fold, o 25.9 3.8E+02 0.013 26.7 10.6 98 121-226 240-349 (496)
459 3tak_A DHDPS, dihydrodipicolin 25.8 1.8E+02 0.0062 26.6 7.7 57 178-237 16-75 (291)
460 4fhz_A Phospholipase/carboxyle 25.7 3.7E+02 0.013 24.2 13.3 109 117-231 154-265 (285)
461 2qq5_A DHRS1, dehydrogenase/re 25.7 2.7E+02 0.0093 24.5 8.8 80 121-208 7-91 (260)
462 3ic5_A Putative saccharopine d 25.7 2E+02 0.007 21.2 8.1 91 120-236 6-97 (118)
463 2r8w_A AGR_C_1641P; APC7498, d 25.5 1.9E+02 0.0063 27.2 7.8 57 178-237 49-108 (332)
464 2ojp_A DHDPS, dihydrodipicolin 25.4 1.9E+02 0.0063 26.6 7.7 51 178-231 16-66 (292)
465 2pzm_A Putative nucleotide sug 25.4 3.7E+02 0.013 24.5 10.1 76 120-207 21-96 (330)
466 3e2i_A Thymidine kinase; Zn-bi 25.3 1.1E+02 0.0038 26.9 5.7 116 129-273 43-161 (219)
467 2nwq_A Probable short-chain de 25.2 2.2E+02 0.0075 25.5 8.1 100 121-227 23-128 (272)
468 3dhu_A Alpha-amylase; structur 25.0 1.1E+02 0.0036 30.1 6.3 27 217-243 82-108 (449)
469 3r6d_A NAD-dependent epimerase 25.0 2.6E+02 0.0089 23.7 8.4 72 121-206 7-80 (221)
470 1f6k_A N-acetylneuraminate lya 25.0 1.8E+02 0.0063 26.6 7.5 56 178-236 18-77 (293)
471 3eb2_A Putative dihydrodipicol 24.7 3.5E+02 0.012 24.8 9.5 89 121-239 75-166 (300)
472 1pjq_A CYSG, siroheme synthase 24.6 1.3E+02 0.0043 29.9 6.7 97 117-241 10-107 (457)
473 2qhx_A Pteridine reductase 1; 24.5 3.2E+02 0.011 25.2 9.4 29 121-150 48-77 (328)
474 3e48_A Putative nucleoside-dip 24.5 1.2E+02 0.0039 27.4 6.1 102 122-242 3-108 (289)
475 3qfe_A Putative dihydrodipicol 24.4 4.3E+02 0.015 24.5 11.3 101 97-226 63-166 (318)
476 2yxb_A Coenzyme B12-dependent 24.0 2E+02 0.0067 23.7 6.9 53 164-232 45-97 (161)
477 2h7i_A Enoyl-[acyl-carrier-pro 24.0 3.7E+02 0.013 23.7 10.0 82 120-208 8-95 (269)
478 3vtz_A Glucose 1-dehydrogenase 23.9 3.8E+02 0.013 23.7 10.3 92 120-226 15-110 (269)
479 2zat_A Dehydrogenase/reductase 23.8 3.7E+02 0.013 23.5 11.3 100 120-226 15-121 (260)
480 2yv2_A Succinyl-COA synthetase 23.8 1.2E+02 0.0043 27.9 6.1 76 150-242 56-132 (297)
481 1tqj_A Ribulose-phosphate 3-ep 23.8 3.3E+02 0.011 23.8 8.8 16 157-173 78-93 (230)
482 2et6_A (3R)-hydroxyacyl-COA de 23.7 6E+02 0.02 25.9 12.0 97 121-227 323-425 (604)
483 1g94_A Alpha-amylase; beta-alp 23.7 47 0.0016 32.8 3.3 27 217-243 63-89 (448)
484 3dm5_A SRP54, signal recogniti 23.6 2.8E+02 0.0096 27.3 8.9 105 128-241 113-224 (443)
485 1pq4_A Periplasmic binding pro 23.5 4.2E+02 0.014 24.1 9.7 56 142-206 189-244 (291)
486 2jwk_A Protein TOLR; periplasm 23.4 1.3E+02 0.0044 20.7 4.9 48 180-233 26-73 (74)
487 2ya1_A Putative alkaline amylo 23.4 47 0.0016 36.8 3.5 26 218-243 561-586 (1014)
488 3dqp_A Oxidoreductase YLBE; al 23.4 2.1E+02 0.0073 24.2 7.4 69 121-207 2-71 (219)
489 1tks_A 3,4-dihydroxy-2-butanon 23.4 1.2E+02 0.004 26.4 5.3 38 197-237 157-194 (204)
490 3oig_A Enoyl-[acyl-carrier-pro 23.4 3.8E+02 0.013 23.5 9.8 84 118-208 6-95 (266)
491 3si9_A DHDPS, dihydrodipicolin 23.4 1.9E+02 0.0063 27.0 7.3 51 178-231 37-87 (315)
492 2yv1_A Succinyl-COA ligase [AD 23.3 91 0.0031 28.8 5.0 76 150-242 56-131 (294)
493 3flu_A DHDPS, dihydrodipicolin 23.1 4.3E+02 0.015 24.1 10.4 97 97-225 59-158 (297)
494 3zs7_A Pyridoxal kinase; trans 23.0 2.8E+02 0.0097 25.4 8.5 56 181-243 56-122 (300)
495 1hjs_A Beta-1,4-galactanase; 4 22.9 1.8E+02 0.0061 27.3 7.1 37 208-244 49-85 (332)
496 2nm0_A Probable 3-oxacyl-(acyl 22.8 3.1E+02 0.011 24.1 8.6 73 120-206 22-94 (253)
497 2q1w_A Putative nucleotide sug 22.6 3.7E+02 0.013 24.6 9.4 101 120-233 22-129 (333)
498 2orv_A Thymidine kinase; TP4A 22.4 3.3E+02 0.011 24.1 8.3 104 129-260 34-141 (234)
499 1wma_A Carbonyl reductase [NAD 22.3 3.9E+02 0.013 23.2 10.3 80 121-206 6-89 (276)
500 3edf_A FSPCMD, cyclomaltodextr 22.2 1.5E+02 0.005 30.5 6.9 27 217-243 197-223 (601)
No 1
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=1.3e-56 Score=460.84 Aligned_cols=427 Identities=56% Similarity=1.055 Sum_probs=352.3
Q ss_pred hhhhhhhhcCCCCCCCccchhhhhhhcCCCCCCCCCCCcccccchhhhhcHHHHHHHHhcCCCCcccccccccccccccc
Q 011570 10 QLLSKIAAGNGHGEDSPYFDGWKAFESDPYHPTKNPNGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAI 89 (483)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (483)
+.+++++.+.-+++.++||..|..+..++|++..||.++|+|++++|+++.+.+.+++.+.........++.........
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~p~~~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 81 (435)
T 3piu_A 2 RMLSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELAL 81 (435)
T ss_dssp ----------------CTTHHHHHHHHSBCBTTTBTTSBEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHH
T ss_pred CccchhhhhcccccCcchhhHHHHhhcCCCCcccCCCCeEEeccccccccHHHHHHHHHhCccccccccccccccccccc
Confidence 35788889999999999999999999999999999999999999999999999999988765432222222222334568
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEE
Q 011570 90 FQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLV 169 (483)
Q Consensus 90 Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~ 169 (483)
|++..|.++||+++|+++++.++.++++++++|++|+|+++++..++.+++++||.|+++.|+|..+...+....|.+++
T Consensus 82 y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~ 161 (435)
T 3piu_A 82 FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIV 161 (435)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEE
T ss_pred cCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEE
Confidence 99999999999999999997766556778999999999999999999999999999999999999998887733499999
Q ss_pred EeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC
Q 011570 170 PVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE 249 (483)
Q Consensus 170 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~ 249 (483)
.++++++++|.+|++.|++++++...++.++++|++++||||||.+++.+++++|+++|++||+++|+||+|.++.|++
T Consensus 162 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~- 240 (435)
T 3piu_A 162 PIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSS- 240 (435)
T ss_dssp EEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSS-
T ss_pred EeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC-
Confidence 9999887789999999999998876666689999999999999999999999999999999999999999999988877
Q ss_pred CCcchHHHhhhhccccC-----CCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCC
Q 011570 250 SSFVSIAEIIDQDIACN-----RNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSD 324 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~-----~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~ 324 (483)
..+.++..+..+. ..+ .+++++++||||.+|++|+|+||++++++.+.+.+.....++.+++++|.++++++.+
T Consensus 241 ~~~~~~~~~~~~~-~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 319 (435)
T 3piu_A 241 PSFISVMEVLKDR-NCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSD 319 (435)
T ss_dssp SCCCCHHHHHHC--------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHC
T ss_pred CCCcCHHHhcccc-ccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHhhcCCCCHHHHHHHHHHhcC
Confidence 6666776664410 001 5788999999999999999999999977778877777777777899999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCC
Q 011570 325 DQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFH 404 (483)
Q Consensus 325 ~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~ 404 (483)
..++++++++.+++++++++++.+.|.+.|+++.++.+|+|+|++++............+++..|++++||.+.||..|+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~ 399 (435)
T 3piu_A 320 KKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCH 399 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccC
Confidence 88777788889999999999999999999999999999999999998654333333455788888888899999999998
Q ss_pred CCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhh
Q 011570 405 CPNPGWFRVCFANMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 405 ~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
..+++++||+++..+++++++++++|++++++..
T Consensus 400 ~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~~~~ 433 (435)
T 3piu_A 400 CTEPGWFRVCFANLPERTLDLAMQRLKAFVGEYY 433 (435)
T ss_dssp CSSTTEEEEECSSSCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHHh
Confidence 7778899999985589999999999999998753
No 2
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=8.4e-55 Score=446.34 Aligned_cols=425 Identities=70% Similarity=1.244 Sum_probs=342.6
Q ss_pred hhhhhhhcCCCCCCCccchhhhhhhcCCCCCCCCCCCcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccC
Q 011570 11 LLSKIAAGNGHGEDSPYFDGWKAFESDPYHPTKNPNGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIF 90 (483)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 90 (483)
++++|+...-.+...|+|..+..+..++|++..++.++|+|+.++|+++++.+.+++...+...+.. ++.........|
T Consensus 1 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~Y 79 (428)
T 1iay_A 1 ILSKLATNEEHGENSPYFDGWKAYDSDPFHPLKNPNGVIQMGLAENQLCLDLIEDWIKRNPKGSICS-EGIKSFKAIANF 79 (428)
T ss_dssp CCCTTGGGC-----CCTTHHHHHHHHSBCCSSSSTTSBEECSSCCCCSSHHHHHHHHHHCTTSSTTC-----CHHHHHHC
T ss_pred CcccccccccCcccccccchhhhhccCCCCcccCCCceeeeccccchhhHHHHHHHHHhcccccccc-ccccccHhhcCC
Confidence 3677777766666678999999998889999998889999999999999888888887654322111 111112235689
Q ss_pred CCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEE
Q 011570 91 QDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVP 170 (483)
Q Consensus 91 ~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~ 170 (483)
+++.|..+||+++|+++++.+|...++++++|++|+|+++++..++.+++++||.|+++.|+|+.+...+....|.+++.
T Consensus 80 ~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~ 159 (428)
T 1iay_A 80 QDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIP 159 (428)
T ss_dssp CCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEE
T ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEE
Confidence 98889999999999999988774444778999999999999999999999999999999999999887554334999999
Q ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCC
Q 011570 171 VVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKES 250 (483)
Q Consensus 171 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~ 250 (483)
+|++.+++|.+|++.|++++++....+.++++|++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++ .
T Consensus 160 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~-~ 238 (428)
T 1iay_A 160 IHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDT-P 238 (428)
T ss_dssp ECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSS-S
T ss_pred eecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCC-C
Confidence 998765678899999999998654445578999999999999999999999999999999999999999999877765 4
Q ss_pred CcchHHHhhhhc--cccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHH
Q 011570 251 SFVSIAEIIDQD--IACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFV 328 (483)
Q Consensus 251 ~~~s~~~l~~~~--~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~ 328 (483)
.+.++..+.... .....++++++.||||.||++|+|+||++++++.+.+.+.....++.+++++|.++..++.+..++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 318 (428)
T 1iay_A 239 QFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFV 318 (428)
T ss_dssp CCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHHHH
T ss_pred CccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHhcccCCHHHHHHHHHHhcChHHH
Confidence 455666664310 000158899999999999999999999999667777777666666678999999999999987766
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCC
Q 011570 329 EKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNP 408 (483)
Q Consensus 329 ~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~ 408 (483)
++++++.++.++++++++.+.|+++|+++.++.+|+|+|++++............++++.|++++||.++||..|+..++
T Consensus 319 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~ 398 (428)
T 1iay_A 319 DNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEP 398 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCC
Confidence 77888899999999999999999889988888788999999975321111123346788888777999999998876556
Q ss_pred CEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 409 GWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 409 ~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
+++||+++..+++++++++++|++++++.
T Consensus 399 ~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 427 (428)
T 1iay_A 399 GWFRVCFANMDDGTVDIALARIRRFVGVE 427 (428)
T ss_dssp SEEEEECSSSCHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEEEecCCHHHHHHHHHHHHHHHhcc
Confidence 89999998569999999999999988654
No 3
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=1.8e-47 Score=399.33 Aligned_cols=350 Identities=21% Similarity=0.328 Sum_probs=287.8
Q ss_pred ccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-CCCCeEEEeCCCCcChHHHHhhhc
Q 011570 86 GIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-DPGDAFLVPTPYYPGFDRDLRWRT 164 (483)
Q Consensus 86 ~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~~~~~~~~~~~ 164 (483)
....|++..|..+||+++++++++.+| +++++++|++|+|+++++..++.+++ ++||.|+++.|+|+.+...++..
T Consensus 126 ~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~- 202 (500)
T 3tcm_A 126 ATGAYSHSQGIHGLRDAIASGIASRDG--FPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALH- 202 (500)
T ss_dssp CSSSCCCTTCCHHHHHHHHHHHHHHHS--SCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHT-
T ss_pred cCCCcCCCcChHHHHHHHHHHHHhhcC--CCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHc-
Confidence 356899999999999999999998877 56789999999999999999999998 89999999999999999999886
Q ss_pred CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC
Q 011570 165 GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT 244 (483)
Q Consensus 165 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~ 244 (483)
|++++.++++++++|.+|++.|++++++...++.++++|+++|||||||.++|.+++++|+++|+++|++||+||+|.++
T Consensus 203 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~ 282 (500)
T 3tcm_A 203 GGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQEN 282 (500)
T ss_dssp TCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTC
T ss_pred CCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCcccc
Confidence 99999999998888999999999999887666668999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCcchHHHhhhhccc-cCCCeEEEEecCcccc-CCCCceEEEEEec--ChHHHHHHHHhhh-cCCCChHHHHHHH
Q 011570 245 VFTKESSFVSIAEIIDQDIA-CNRNLIHIVYSLSKDM-GFPGFRVGIIYSY--NDQVVSCARKMSS-FGLVSSQTQHLIA 319 (483)
Q Consensus 245 ~~~~~~~~~s~~~l~~~~~~-~~~~~vi~~~S~SK~~-g~~GlRiG~li~~--~~~l~~~~~~~~~-~~~~s~~~q~~~~ 319 (483)
.|++...+.++..+...+.. ....++++++||||+| |++|+|+||+++. ++.+.+.+..... ....+.+.|.++.
T Consensus 283 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~ 362 (500)
T 3tcm_A 283 IYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILAS 362 (500)
T ss_dssp BCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred ccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHhcccCCCHHHHHHHH
Confidence 88652456676655432210 0234689999999999 8999999999982 4445555544433 4557888999998
Q ss_pred HhcCChh-------HHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecC--chh-h---ccChHHHHHH
Q 011570 320 TMLSDDQ-------FVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLH--HLL-K---EQTYEAEMAL 385 (483)
Q Consensus 320 ~~l~~~~-------~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~--~~~-~---~~~~~~~~~~ 385 (483)
.++.... .+.++..+.++.++++++++.+.|+++ |+++.++++|+|+|+++. ... + ......+..+
T Consensus 363 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~ 442 (500)
T 3tcm_A 363 LVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFY 442 (500)
T ss_dssp HHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHH
T ss_pred HHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHH
Confidence 8887421 124556777889999999999999998 999999999999996553 211 0 0011123355
Q ss_pred HHHHHHhcCeEeeCCCCCCC-CCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhh
Q 011570 386 WRVIINEVKLNVSPGSSFHC-PNPGWFRVCFANMDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 386 ~~~Ll~~~gV~v~pg~~f~~-~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
+..+++++||.+.||+.|+. .+.+++|++++ .+++++++++++|++++++..+
T Consensus 443 ~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~i~~l~~~~~~~~~ 496 (500)
T 3tcm_A 443 ALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL-PQEDKIPAVISRFTVFHEAFMS 496 (500)
T ss_dssp HHHHHHHHCEECEESTTTCCCTTCCBEEEESC-SCTTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 67788888999999999985 45678999999 7899999999999999987654
No 4
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=9.4e-49 Score=395.88 Aligned_cols=350 Identities=21% Similarity=0.369 Sum_probs=285.1
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|+|+.++++++ ++.+.+++.+... .....|++..|.++||++++++++..+| +.+++++|++
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~~ 96 (385)
T 1b5p_A 31 VDLVALTAGEPDFDTPEHVKEAARRALA------------QGKTKYAPPAGIPELREALAEKFRRENG--LSVTPEETIV 96 (385)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHTTC--CCCCGGGEEE
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCChHHEEE
Confidence 46799999988765 3444554433100 1134688888999999999999998776 5568899999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++.+++++||+|+++.|+|+.+...++.. |.+++.++++++++|.+|+++|++++.+ ++++|+
T Consensus 97 t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~ 169 (385)
T 1b5p_A 97 TVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFA-GGVVVEVETLPEEGFVPDPERVRRAITP------RTKALV 169 (385)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHT-TCEEEEEECCGGGTTCCCHHHHHTTCCT------TEEEEE
T ss_pred cCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHc-CCEEEEeecCcccCCCCCHHHHHHhcCC------CCEEEE
Confidence 999999999999999999999999999999999988876 9999999998656789999999988753 689999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
+++||||||.++|.+++++|+++|+++|++||+||+|+++.+++ .+.++.++. . +++++++||||.+|++|
T Consensus 170 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~------~-~~~i~~~s~SK~~~~~G 240 (385)
T 1b5p_A 170 VNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG--EHFSPGRVA------P-EHTLTVNGAAKAFAMTG 240 (385)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS--CCCCGGGTC------T-TTEEEEEESTTTTTCGG
T ss_pred EeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC--CCCCHHHcC------C-CCEEEEEechhhcCCcc
Confidence 99999999999999999999999999999999999999877654 234554441 2 78999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCc
Q 011570 285 FRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNA 362 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~ 362 (483)
+|+||+++ ++.+.+.+...... ..++.++|.++.+++.......+++++.++.++++++++.+.|+++|+++.++++
T Consensus 241 ~RiG~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 319 (385)
T 1b5p_A 241 WRIGYACG-PKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSG 319 (385)
T ss_dssp GCCEEEEC-CHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSB
T ss_pred cceEEEEe-CHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCe
Confidence 99999999 56666665554433 4578899999888886511113457888889999999999999888999889999
Q ss_pred eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 363 GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 363 g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
++|+|++++.. . .+..++++.|+ ++||.++||+.|+. ++++||+++ .+++++++++++|+++++
T Consensus 320 ~~~~~~~~~~~-~----~~~~~l~~~l~-~~gv~v~~g~~f~~--~~~iRis~~-~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 320 AFYVLMDTSPI-A----PDEVRAAERLL-EAGVAVVPGTDFAA--FGHVRLSYA-TSEENLRKALERFARVLG 383 (385)
T ss_dssp TTEEEEECTTT-C----SSHHHHHHHHH-HTTEECEESGGGTC--TTEEEEECC-SCHHHHHHHHHHGGGGC-
T ss_pred eEEEEEecCCC-C----CCHHHHHHHHH-HCCeEEecccccCC--CCeEEEEec-CCHHHHHHHHHHHHHHHh
Confidence 99999998631 1 01336788887 67999999999864 679999998 689999999999987664
No 5
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=1.9e-46 Score=386.51 Aligned_cols=360 Identities=19% Similarity=0.308 Sum_probs=289.2
Q ss_pred CCcccccchhhhh---cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcE
Q 011570 46 NGVIQMGLAENLL---CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRI 122 (483)
Q Consensus 46 ~~~i~l~~~~n~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i 122 (483)
.++|+|+.+.+.. +++.+.+++.+... + ......+|++..|.++||+++++++.+.+| ++ ++++|
T Consensus 76 ~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~------~---~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~-~~~~v 143 (448)
T 3aow_A 76 SDIISLAGGLPNPKTFPKEIIRDILVEIME------K---YADKALQYGTTKGFTPLRETLMKWLGKRYG--IS-QDNDI 143 (448)
T ss_dssp SSSEECCCCCCCGGGSCHHHHHHHHHHHHH------H---SHHHHHSCCCTTCCHHHHHHHHHHHHHHHC--CC-TTSEE
T ss_pred CCcEeCCCCCCCchhCCHHHHHHHHHHHHH------h---hhHHHhCCCCCCCcHHHHHHHHHHHHHhcC--cC-ChhhE
Confidence 3678998775432 45555555443100 0 001245799888999999999999977766 44 78999
Q ss_pred EEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 123 VMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
++|+|+++++..++.+++++||.|+++.|+|..+...++.. |.+++.+|++++ .+|++.|+++++....++.++++
T Consensus 144 ~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~---g~d~~~L~~~l~~~~~~~~~~k~ 219 (448)
T 3aow_A 144 MITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFY-EPQYIQIPLDDE---GMKVEILEEKLKELKSQGKKVKV 219 (448)
T ss_dssp EEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTT-CCEEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEE
T ss_pred EEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHc-CCEEEEeccCCC---CCCHHHHHHHHhhhhccCCCCeE
Confidence 99999999999999999999999999999999999988876 999999998754 38999999998632112237888
Q ss_pred E-EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccC
Q 011570 203 V-LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG 281 (483)
Q Consensus 203 i-~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g 281 (483)
| ++++|+||||.+++.+++++|+++|++||++||+||+|.++.|++ ..+.++.++. ..+++++++||||.+|
T Consensus 220 v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g-~~~~~~~~~~------~~~~vi~~~S~SK~~~ 292 (448)
T 3aow_A 220 VYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSG-NPEKKIKALD------NEGRVIYLGTFSKILA 292 (448)
T ss_dssp EEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSS-CCCCCTGGGC------TTSCEEEEEESTTTTC
T ss_pred EEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCC-CCCcCHHhcC------CCCCEEEEccchhhcc
Confidence 7 568999999999999999999999999999999999999988766 4445665552 2468999999999999
Q ss_pred CCCceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC---Cce
Q 011570 282 FPGFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV---GIG 356 (483)
Q Consensus 282 ~~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~---gi~ 356 (483)
+|+|+||++++ +.+.+.+..... ...+++++|.++.++|.... +.+++++.++.++++++++.+.|++. |++
T Consensus 293 -~GlriG~v~~~-~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~ 369 (448)
T 3aow_A 293 -PGFRIGWMVGD-PGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGY-LEKHIPEIRKFYKPRRDAMLEALEEFMPEGVK 369 (448)
T ss_dssp -GGGCCEEEEEC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCE
T ss_pred -ccccEEEEEeC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 99999999995 666665544332 24578899999999998754 36778888999999999999999875 788
Q ss_pred eecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC--CCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 357 CLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP--NPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 357 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~--~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
+..|.+|+|+|++++...+ ..+++..|+++ ||.+.||..|+.. .++++||+++..+++++++++++|++++
T Consensus 370 ~~~p~~g~~~~v~~~~~~~------~~~l~~~l~~~-gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l 442 (448)
T 3aow_A 370 WTKPEGGMFIWVTLPDGID------SKKMLERAIKK-GVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETI 442 (448)
T ss_dssp ECCCSBSSEEEEECSTTCC------HHHHHHHHHHT-TEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHH
T ss_pred EeCCCccEEEEEEcCCCCC------HHHHHHHHHHC-CcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 8888999999999985322 33778888876 9999999988653 4679999998668999999999999998
Q ss_pred HHhh
Q 011570 435 LKNV 438 (483)
Q Consensus 435 ~~~~ 438 (483)
++..
T Consensus 443 ~~~~ 446 (448)
T 3aow_A 443 KEEL 446 (448)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 6
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=6.4e-47 Score=385.86 Aligned_cols=361 Identities=18% Similarity=0.300 Sum_probs=288.3
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC-CcE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP-DRI 122 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~-~~i 122 (483)
+.++|||+.++++++ ++.+.+++.+.... .....|++..|..+||+++|+++.+.+| +++++ ++|
T Consensus 36 g~~~idl~~g~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~l~~~ia~~~~~~~g--~~~~~~~~v 102 (412)
T 2x5d_A 36 GEDIIDLSMGNPDGPTPPHIVEKLCTVAQR-----------EDTHGYSTSRGIPRLRRAISHWYRDRYD--VQIDPESEA 102 (412)
T ss_dssp TCCCEECSSCCCCSCCCHHHHHHHHHTC--------------------CTTCCHHHHHHHHHHHHHHHC--CCCCTTTSE
T ss_pred CCCEEecCCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCcCE
Confidence 346799999988764 45666666542211 1135788778999999999999987776 44677 799
Q ss_pred EEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 123 VMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
++|+|+++++..++.+++++||+|+++.|+|+.+...++.. |.+++.++++++++|.+|++.|++++. .++++
T Consensus 103 ~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~i~------~~~~~ 175 (412)
T 2x5d_A 103 IVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIA-GAQVRSVPLVPGIDFFNELERAIRESI------PKPRM 175 (412)
T ss_dssp EEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHH-TCEEEEEECSTTSCHHHHHHHHHHTEE------SCCSE
T ss_pred EEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHc-CCEEEEeecCCccCCCCCHHHHHHhcc------cCceE
Confidence 99999999999999999999999999999999999988876 999999998865567789999988774 27899
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
|++++||||||.+++.+++++|+++|++||++||+||+|.++.+.+ ..+.++..+.. ..+++++++|+||.+|+
T Consensus 176 v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~-----~~~~~i~~~s~sK~~~~ 249 (412)
T 2x5d_A 176 MILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDG-WKAPSIMQVPG-----AKDIAVEFFTLSKSYNM 249 (412)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT-CCCCCGGGSTT-----GGGTEEEEEECC-CCSC
T ss_pred EEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCC-CCCCChhhccC-----ccCcEEEEecCccccCC
Confidence 9999999999999999999999999999999999999999987755 44455555421 13678999999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecC
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKS 360 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~ 360 (483)
+|+|+||+++ ++.+.+.+..... .+.+++++|.++..++... .+++++.++.++++++++.+.|.++|+++.++
T Consensus 250 ~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 325 (412)
T 2x5d_A 250 AGWRIGFMVG-NPELVSALARIKSYHDYGTFTPLQVAAIAALEGD---QQCVRDIARQYQQRRDVLVKGLREAGWMVENP 325 (412)
T ss_dssp TTSCCEEEEE-CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSC---SHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred cccceEEEEc-CHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHCCCEecCC
Confidence 9999999999 5666666554433 2567889999988888653 23467778888999999999998889888888
Q ss_pred CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhh
Q 011570 361 NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 361 ~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
.+|+|+|++++..... .+..+++..|++++||.+.||..|+..+++++||+++. +++++++++++|++++++...
T Consensus 326 ~~g~~~~~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~~~ 400 (412)
T 2x5d_A 326 KASMYVWAKIPEPYAH---LGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE-NRDRLRQAVRGIKAMFRADGL 400 (412)
T ss_dssp SBSSEEEEECCTTTGG---GCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHTTC
T ss_pred CeeeEEEEEcCCccCC---CCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhcCC
Confidence 8899999999753210 01347888888777999999998865556899999985 899999999999999987644
No 7
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=1.1e-46 Score=382.02 Aligned_cols=345 Identities=14% Similarity=0.162 Sum_probs=268.6
Q ss_pred CCcccccchhh------hhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 46 NGVIQMGLAEN------LLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 46 ~~~i~l~~~~n------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
.++|||+.++. +.+++.+.++.. ... .-....+|++..|.++||+++++|+....+ ..+++
T Consensus 29 ~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~----------~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~--~~~~~ 95 (405)
T 3k7y_A 29 EEKINLSIGVCCNDDGDLHIFDSVLNADK-LVT----------ENYKEKPYLLGNGTEDFSTLTQNLIFGNNS--KYIED 95 (405)
T ss_dssp SSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHH----------HHCCCCCCCTTSSCHHHHHHHHHHHHCSSC--TTTTT
T ss_pred cCcEEeeeeeeECCCCCCcccHHHHHHHH-Hhc----------CCCCCCCCCCCCCcHHHHHHHHHHHcCCCC--ccccc
Confidence 46799999962 123566666532 100 002346899999999999999999975543 23456
Q ss_pred Cc--EEEeCChhHHHHHHHHHhcC--CCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 120 DR--IVMSGGATGAHETVAFCLAD--PGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 120 ~~--i~it~G~~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
++ |++|+|+++++.+++.++++ | |+|++++|+|+.|...++.. |++++.+|+.++++|.+|++.|++++.+.
T Consensus 96 ~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~~-- 171 (405)
T 3k7y_A 96 KKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESR-GFNLKYINFFDYNLIDINYDLFLNDLRNI-- 171 (405)
T ss_dssp TCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTT-TCEEEEECCEETTTTEECHHHHHHHHHHS--
T ss_pred cceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHc-CCeEEEEeccccccCCcCHHHHHHHHHhC--
Confidence 64 69999999999999999988 9 99999999999999999886 99999999854557899999999998752
Q ss_pred cCCceeEEEEeCC-CCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC-CCcchHHHhhhhccccCCCeEEEE
Q 011570 196 SNIRIKGVLITNP-SNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE-SSFVSIAEIIDQDIACNRNLIHIV 273 (483)
Q Consensus 196 ~~~~~~~i~l~~P-~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~-~~~~s~~~l~~~~~~~~~~~vi~~ 273 (483)
+++++|++++| |||||.+++.+++++|+++|++|+++||+||+|.++.+++. ....++..+.. ..+++|++
T Consensus 172 --~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~-----~~~~~i~~ 244 (405)
T 3k7y_A 172 --PNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEE-----KNIAFSVC 244 (405)
T ss_dssp --CSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHT-----TTCCEEEE
T ss_pred --CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHh-----cCCcEEEE
Confidence 24577888765 89999999999999999999999999999999999876531 11234444433 34789999
Q ss_pred ecCccccCCCCceEEEEEe--cChHHHHHH----HHh--hhcCCCChHHHHHHHHhcCChhH---HHHHHHHHHHHHHHH
Q 011570 274 YSLSKDMGFPGFRVGIIYS--YNDQVVSCA----RKM--SSFGLVSSQTQHLIATMLSDDQF---VEKFIAESAKRIAER 342 (483)
Q Consensus 274 ~S~SK~~g~~GlRiG~li~--~~~~l~~~~----~~~--~~~~~~s~~~q~~~~~~l~~~~~---~~~~~~~~~~~l~~~ 342 (483)
+||||+||++|+|+||+++ +++.+.+.+ ... ..+...+.++|.+++.++.+..+ ..+++++.++.++++
T Consensus 245 ~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~ 324 (405)
T 3k7y_A 245 QSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNN 324 (405)
T ss_dssp EECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999865 355544332 222 22344567899999998887532 245567778889999
Q ss_pred HHHHHHhhh----cCC----ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEE
Q 011570 343 HKAFTWGLS----QVG----IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVC 414 (483)
Q Consensus 343 ~~~l~~~L~----~~g----i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis 414 (483)
|+.+.+.|+ ++| +++.+|+||||+|++++. +++.+| +++||.+.||. |||
T Consensus 325 R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~-----------~~~~~L-~~~gV~v~p~~----------Ris 382 (405)
T 3k7y_A 325 RILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA-----------KIAEHL-KTHHIYIINNG----------RIN 382 (405)
T ss_dssp HHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGG-----------GGTTTT-TTTTEECCTTS----------EEE
T ss_pred HHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCH-----------HHHHHH-HHCCEeecCCC----------eEE
Confidence 999999999 776 688899999999998763 234456 78899999852 999
Q ss_pred eccCCHHHHHHHHHHHHHHHHH
Q 011570 415 FANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 415 ~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
++..++++++.++++|+++++.
T Consensus 383 ~a~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 383 VSGITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp GGGCCTTHHHHHHHHHHHHHHC
T ss_pred EeccCHHHHHHHHHHHHHHHhh
Confidence 9877899999999999998763
No 8
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=3.6e-46 Score=377.88 Aligned_cols=352 Identities=20% Similarity=0.316 Sum_probs=288.0
Q ss_pred CCCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCC-cCCC-
Q 011570 44 NPNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRIT-FDPD- 120 (483)
Q Consensus 44 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~-~~~~- 120 (483)
...++|+|+.++++++ ++.+.+++.+.. .....|++..|..++|+++++++.+.+| ++ ++++
T Consensus 28 ~g~~~i~l~~~~~~~~~~~~v~~a~~~~~-------------~~~~~y~~~~g~~~lr~~la~~l~~~~g--~~~~~~~~ 92 (396)
T 3jtx_A 28 EGMEAVPLHIGEPKHPTPKVITDALTASL-------------HELEKYPLTAGLPELRQACANWLKRRYD--GLTVDADN 92 (396)
T ss_dssp TTCCCEECSCCSCCSCCCHHHHHHHHHTG-------------GGGGSCCCTTCCHHHHHHHHHHHHHHTT--TCCCCTTT
T ss_pred cCCCeEEeCCcCCCCCCCHHHHHHHHHHh-------------hhccCCCCCCCcHHHHHHHHHHHHHhcC--CCCCCCCC
Confidence 3467899999998876 456666665421 2356899888999999999999998877 44 5688
Q ss_pred cEEEeCChhHHHHHHHHHhcCCC-----CeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 121 RIVMSGGATGAHETVAFCLADPG-----DAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~g-----d~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
+|++|+|+++++..++.+++++| |+|+++.|+|..+...++.. |.+++.++++ +.+|.+|++.|++++.+
T Consensus 93 ~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~-g~~~~~v~~~-~~g~~~d~~~l~~~~~~--- 167 (396)
T 3jtx_A 93 EILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLG-GGEIHFANCP-APSFNPDWRSISEEVWK--- 167 (396)
T ss_dssp SEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHT-TCEEEEEECC-TTTCCCCGGGSCHHHHH---
T ss_pred eEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHc-CCEEEEeecC-CCCCccCHHHHHHhhcc---
Confidence 99999999999999999999997 79999999999999988876 9999999994 45788999999999875
Q ss_pred cCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEec
Q 011570 196 SNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYS 275 (483)
Q Consensus 196 ~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S 275 (483)
++++|++++||||||.+++.+++++|+++|++||++||+||+|.++.+++ ..+.+.......+. ...+++++++|
T Consensus 168 ---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~i~~~s 242 (396)
T 3jtx_A 168 ---RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDG-NKPLGCLQAAAQLG-RSRQKLLMFTS 242 (396)
T ss_dssp ---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTT-CCCCCHHHHHHHTT-CCCTTEEEEEE
T ss_pred ---CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCchHHhhhhhcc-cccCcEEEEec
Confidence 78999999999999999999999999999999999999999999887765 33344433221000 02578999999
Q ss_pred CccccCCCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 276 LSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 276 ~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
|||.||++|+|+||+++ ++.+.+.+...... +.+++++|.++.+++.... ++++.++.++++++.+.+.|.+.
T Consensus 243 ~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~l~~~ 317 (396)
T 3jtx_A 243 LSKRSNVPGLRSGFVAG-DAELLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQ----HVIDNRRLYQEKFERVIPILQQV 317 (396)
T ss_dssp STTTSSCGGGCCEEEEE-CHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCCH----HHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cccccCCcccceEEEEe-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999998 56666665544332 5578899999988887644 46777888999999999999876
Q ss_pred CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC------CCCCEEEEEeccCCHHHHHHHH
Q 011570 354 GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC------PNPGWFRVCFANMDDRTMEIAL 427 (483)
Q Consensus 354 gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~------~~~~~iRis~~~~~~e~l~~~l 427 (483)
+.+..+.+|+|+|++++.. ...+++..|++++||.+.||+.|+. ..++++||+++. +++++++++
T Consensus 318 -~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~-~~~~i~~~l 388 (396)
T 3jtx_A 318 -FDVKLPDASFYIWLKVPDG-------DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA-DVATCVKAA 388 (396)
T ss_dssp -SCCCCCSSSSEEEEECTTS-------CHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS-CHHHHHHHH
T ss_pred -CCccCCCeeEEEEEECCCC-------CHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC-CHHHHHHHH
Confidence 5667888999999999851 1337788888888999999998875 246799999985 999999999
Q ss_pred HHHHHHH
Q 011570 428 SRITSFM 434 (483)
Q Consensus 428 ~~L~~~l 434 (483)
++|++++
T Consensus 389 ~~l~~~l 395 (396)
T 3jtx_A 389 EDIVSLY 395 (396)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9998764
No 9
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=2e-46 Score=379.00 Aligned_cols=356 Identities=22% Similarity=0.392 Sum_probs=290.6
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCc-EE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDR-IV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~-i~ 123 (483)
.++|+|+.++++++ ++.+.+++.+... .....|++..|..++|+++|+++.+.+| +++++++ |+
T Consensus 26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~l~~~la~~~~~~~g--~~~~~~~~v~ 91 (389)
T 1gd9_A 26 KDVISLGIGEPDFDTPQHIKEYAKEALD------------KGLTHYGPNIGLLELREAIAEKLKKQNG--IEADPKTEIM 91 (389)
T ss_dssp SSCEECCCCSCSSCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHHHC--CCCCTTTSEE
T ss_pred cCeEecCCCCCCCCCCHHHHHHHHHHHh------------CCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCeEE
Confidence 36789999988764 4455555443100 0124688888999999999999987766 4467889 99
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.+++++||+|+++.|+|+.+...++.. |.+++.+|++++++|.+|++.|++++.+ ++++|
T Consensus 92 ~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v 164 (389)
T 1gd9_A 92 VLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILA-GGKPVEVPTYEEDEFRLNVDELKKYVTD------KTRAL 164 (389)
T ss_dssp EESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHH-TCEEEEEECCGGGTTCCCHHHHHHHCCT------TEEEE
T ss_pred EcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHC-CCEEEEeccCCccCCCCCHHHHHHhcCc------CceEE
Confidence 9999999999999999999999999999999999988876 9999999987655688999999998853 68999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++||||||.++|.+++++|+++|++||++||+||+|.++.+++ ..+.++..+.. ..+++++++|+||.+|++
T Consensus 165 ~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~-----~~~~~i~~~s~sK~~~~~ 238 (389)
T 1gd9_A 165 IINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDD-ARHYSIASLDG-----MFERTITVNGFSKTFAMT 238 (389)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTT-CCCCCGGGSTT-----CGGGEEEEEESTTTTTCG
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCC-CCCCCHhhccC-----CCCCEEEEecChhhcCCc
Confidence 999999999999999999999999999999999999999887765 33345554421 136789999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
|+|+||+++ ++.+.+.+..... .+.+++++|.++..++..... .+++++.+++++++++++.+.|+++|+++..+.
T Consensus 239 G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 316 (389)
T 1gd9_A 239 GWRLGFVAA-PSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERS-WKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPK 316 (389)
T ss_dssp GGCCEEEEC-CHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred ccceEEEEE-CHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCc-chHHHHHHHHHHHHHHHHHHHHHHcCCeecCCC
Confidence 999999999 4666666654433 245788999999889887432 236788888999999999999998899888888
Q ss_pred ceEEEeeecCc-hhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 362 AGLFLWMDLHH-LLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 362 ~g~f~~~~l~~-~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
+|+|+|++++. ..+ ..+++..|++++||.+.||..|+..+++++||+++. +++++++++++|++++++.
T Consensus 317 ~~~~~~~~~~~~~~~------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~~~~~ 386 (389)
T 1gd9_A 317 GAFYIFPRIRDTGLT------SKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-AYEKLEEAMDRMERVLKER 386 (389)
T ss_dssp BTTEECCBCGGGTCC------HHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHHHHHT
T ss_pred eeeEEEEeccCCCCC------HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence 99999999874 111 336788888677999999998875556899999985 8999999999999988654
No 10
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-47 Score=390.79 Aligned_cols=359 Identities=20% Similarity=0.324 Sum_probs=288.2
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
..++|+|+.+++.++ ++.+.+++.+.... .....|++..|.++||+++|+++.+.+| .++++++|+
T Consensus 56 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~-----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~v~ 122 (447)
T 3b46_A 56 GRELINLGQGFFSYSPPQFAIKEAQKALDI-----------PMVNQYSPTRGRPSLINSLIKLYSPIYN--TELKAENVT 122 (447)
T ss_dssp TSCCEECCCCSCSSCCCHHHHHHHHHHTTS-----------GGGGSCCCTTCCHHHHHHHHHHHTTTTT--SCCCGGGEE
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhC-----------cCCCCCCCCCCCHHHHHHHHHHHHHhcC--CCCChhhEE
Confidence 357899999987664 45566655442110 1245799888999999999999987776 456788999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCC----------CcccCHHHHHHHHHHH
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSN----------DFKVTMEALEAAYEKA 193 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~----------~~~~d~~~l~~~i~~~ 193 (483)
+|+|+++++..++.+++++||+|++++|+|+.+...++.. |.+++.+++++++ +|.+|++.|++++.+
T Consensus 123 ~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~- 200 (447)
T 3b46_A 123 VTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELC-GGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITS- 200 (447)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCT-
T ss_pred EeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHc-CCEEEEEeCCCccccccccccccCcccCHHHHHHhhcc-
Confidence 9999999999999999999999999999999999988876 9999999986543 688999999988752
Q ss_pred HhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHh-hhhccccCCCeEEE
Q 011570 194 QESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEI-IDQDIACNRNLIHI 272 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l-~~~~~~~~~~~vi~ 272 (483)
++++|++++||||||.+++.+++++|+++|++||++||+||+|.++.|++ . +.++..+ .. ..+++++
T Consensus 201 -----~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~-~~~~~~~~~~-----~~~~~i~ 268 (447)
T 3b46_A 201 -----KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-S-FTRIATLSPE-----IGQLTLT 268 (447)
T ss_dssp -----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-C-CCCGGGSCHH-----HHTTEEE
T ss_pred -----CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-C-CcCHHHcCCC-----CCCcEEE
Confidence 78999999999999999999999999999999999999999999987764 2 2344443 11 1368999
Q ss_pred EecCccccCCCCceEEEEEecChHHHHHHHHhh--hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhh
Q 011570 273 VYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGL 350 (483)
Q Consensus 273 ~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L 350 (483)
++|+||.+|++|+|+||+++.++.+.+.+.... ..+.++++.|.++.++|.... .+.++++.++.++++++++.+.|
T Consensus 269 i~S~sK~~~~~G~riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~-~~~~~~~~~~~~~~~~~~l~~~L 347 (447)
T 3b46_A 269 VGSAGKSFAATGWRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDAL-KIGYFEKMRQEYINKFKIFTSIF 347 (447)
T ss_dssp EEEHHHHTTCTTSCCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCchhcCCcchhhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCc-chHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999994455555554432 234578899998888886542 25567888899999999999999
Q ss_pred hcCCceeecCCceEEEeeecCchhhccC---------hHHHHHHHHHHHHhcCeEeeCCCCCCCC-----CCCEEEEEec
Q 011570 351 SQVGIGCLKSNAGLFLWMDLHHLLKEQT---------YEAEMALWRVIINEVKLNVSPGSSFHCP-----NPGWFRVCFA 416 (483)
Q Consensus 351 ~~~gi~~~~~~~g~f~~~~l~~~~~~~~---------~~~~~~~~~~Ll~~~gV~v~pg~~f~~~-----~~~~iRis~~ 416 (483)
+++|+++..+.+|+|+|++++....... .....+++..|++++||.+.||+.|+.. +++++||+++
T Consensus 348 ~~~g~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~ 427 (447)
T 3b46_A 348 DELGLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVC 427 (447)
T ss_dssp HHHTCCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECC
T ss_pred HHCCCeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEe
Confidence 9889998889999999999975200000 0124478888887789999999988643 2579999998
Q ss_pred cCCHHHHHHHHHHHHH
Q 011570 417 NMDDRTMEIALSRITS 432 (483)
Q Consensus 417 ~~~~e~l~~~l~~L~~ 432 (483)
.+++++++++++|++
T Consensus 428 -~~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 428 -KDDAYLENAVERLKL 442 (447)
T ss_dssp -SCHHHHHHHHHHGGG
T ss_pred -CCHHHHHHHHHHHHH
Confidence 489999999999976
No 11
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.1e-46 Score=387.22 Aligned_cols=349 Identities=21% Similarity=0.326 Sum_probs=278.4
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCC----eEEEeCCCCcChHHHHhh
Q 011570 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGD----AFLVPTPYYPGFDRDLRW 162 (483)
Q Consensus 87 ~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd----~Vlv~~P~y~~~~~~~~~ 162 (483)
...|++..|.++||++||+++.+.+| ++++++++|++|+|+++++..++.+++++|| .|+++.|+|+.|...+..
T Consensus 122 ~~~Y~~~~G~~~lr~~ia~~~~~~~g-G~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~ 200 (498)
T 3ihj_A 122 LGSYSASQGVNCIREDVAAYITRRDG-GVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISE 200 (498)
T ss_dssp ------CCSCHHHHHHHHHHHHHHTT-TCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcC-CCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHH
Confidence 46799999999999999999987763 1557899999999999999999999999875 999999999999999988
Q ss_pred hcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccc
Q 011570 163 RTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYA 242 (483)
Q Consensus 163 ~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~ 242 (483)
. |++++.++++++++|.+|+++|++++++.... .++++|+++|||||||.++|.+++++|+++|+++|++||+||+|.
T Consensus 201 ~-g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~-~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~ 278 (498)
T 3ihj_A 201 L-DAIQVNYYLDEENCWALNVNELRRAVQEAKDH-CDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQ 278 (498)
T ss_dssp T-TCEEEEEECBGGGTTBCCHHHHHHHHHHHTTT-SEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred c-CCEEEEeeccccccCCCCHHHHHHHHHhhhcc-CCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCcc
Confidence 6 99999999998888999999999999864221 268999999999999999999999999999999999999999999
Q ss_pred cCccCCCCCcchHHHhhhhcccc--CCCeEEEEecCcccc-CCCCceEEEEEe--cChHHHHHHHHhh-hcCCCChHHHH
Q 011570 243 ATVFTKESSFVSIAEIIDQDIAC--NRNLIHIVYSLSKDM-GFPGFRVGIIYS--YNDQVVSCARKMS-SFGLVSSQTQH 316 (483)
Q Consensus 243 ~~~~~~~~~~~s~~~l~~~~~~~--~~~~vi~~~S~SK~~-g~~GlRiG~li~--~~~~l~~~~~~~~-~~~~~s~~~q~ 316 (483)
++.|++...+.++.++..++... ...++|+++||||.| |++|+|+||++. .++.+.+.+.... .....+.+.|.
T Consensus 279 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~~~~~~~q~ 358 (498)
T 3ihj_A 279 DNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQA 358 (498)
T ss_dssp TCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSCCCCHHHHH
T ss_pred ccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhccCCCCHHHHH
Confidence 98887523567777664322100 123588999999999 899999999984 3666766665543 34557889999
Q ss_pred HHHHhcCC-----hhH--HHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecCchhhc------cChHHH
Q 011570 317 LIATMLSD-----DQF--VEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLHHLLKE------QTYEAE 382 (483)
Q Consensus 317 ~~~~~l~~-----~~~--~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~~~~~~------~~~~~~ 382 (483)
++..++.. +.+ ..++.++.++.++++++++.+.|+++ |+++.++++|+|+|++++..... .....+
T Consensus 359 a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~ 438 (498)
T 3ihj_A 359 AMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPD 438 (498)
T ss_dssp HHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHHHHHHHHHTTSCHH
T ss_pred HHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEeccCchhhhHHHHhcCCCcH
Confidence 99999875 111 12334667788999999999999998 99999999999999876421110 011123
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCC-CCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhh
Q 011570 383 MALWRVIINEVKLNVSPGSSFHC-PNPGWFRVCFANMDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 383 ~~~~~~Ll~~~gV~v~pg~~f~~-~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
..++..+++++||.+.||+.|+. .+++++|++++ .+++++++++++|++++++..+
T Consensus 439 ~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~-~~~e~l~~~i~~L~~~~~~~~~ 495 (498)
T 3ihj_A 439 MFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL-PPVEKLKTVLQKVKDFHINFLE 495 (498)
T ss_dssp HHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC-SCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 23467788888999999999985 45679999997 7999999999999999988754
No 12
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=2.2e-46 Score=380.97 Aligned_cols=353 Identities=20% Similarity=0.342 Sum_probs=287.8
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC-CcEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP-DRIV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~-~~i~ 123 (483)
.++|+|+.++++++ ++.+.+++.+.... .....|++..|..+||+++|+++.+.+| +++++ ++|+
T Consensus 47 ~~~idl~~g~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~~v~ 113 (404)
T 2o1b_A 47 LPLINMAVGIPDGPTPQGIIDHFQKALTI-----------PENQKYGAFHGKEAFKQAIVDFYQRQYN--VTLDKEDEVC 113 (404)
T ss_dssp SCCEECCCCSCSSCCCHHHHHHHHHHTTC-----------HHHHSCCCTTCCHHHHHHHHHHHHHHHC--CCCCTTTSEE
T ss_pred CCEEecCCcCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCcccEE
Confidence 45899999998765 45566655442110 1235788878999999999999987777 44566 7999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.+++++||+|+++.|+|..+...++.. |.+++.+++++ ++|.+|++.|++++.. ++++|
T Consensus 114 ~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~-~~~~~d~~~l~~~l~~------~~~~v 185 (404)
T 2o1b_A 114 ILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLA-DGKPVPLNLEP-PHYLPDWSKVDSQIID------KTKLI 185 (404)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHT-TCEEEEEECCT-TTCCCCGGGSCHHHHH------HEEEE
T ss_pred EcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHC-CCEEEEeccCc-ccCcCCHHHHHHhhcc------CceEE
Confidence 9999999999999999999999999999999999988876 99999999876 5678999999998864 78999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++|+||||.+++.+++++|+++|+++|++||+||+|.++.+++ . +.++..+.. ..+++++++||||.+|++
T Consensus 186 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~-~~~~~~~~~-----~~~~~i~~~s~sK~~g~~ 258 (404)
T 2o1b_A 186 YLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-K-NPSILASEN-----GKDVAIEIYSLSKGYNMS 258 (404)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS-C-CCCGGGSTT-----HHHHEEEEEESTTTTTCG
T ss_pred EEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-C-CCChhhcCC-----CCCCEEEEEecchhccCc
Confidence 999999999999999999999999999999999999999876654 2 234444321 125789999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
|+|+||+++ ++.+.+.+..... .+.+++++|.++.+++... .+++++.++.++++++++.+.|++.|+++.++.
T Consensus 259 G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 334 (404)
T 2o1b_A 259 GFRVGFAVG-NKDMIQALKKYQTHTNAGMFGALQDAAIYALNHY---DDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAK 334 (404)
T ss_dssp GGCCEEEEE-CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHTTCCEECCC
T ss_pred hhheEeEec-CHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCC
Confidence 999999998 5666665554332 2457889999888888652 345778888899999999999998899988888
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
+|+|+|++++...+ ..+++..|++++||.+.||..|+...++++||+++. +++++++++++|++++++.
T Consensus 335 ~g~~~~~~~~~~~~------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~~l~~~l~~~ 403 (404)
T 2o1b_A 335 GGIYVWLETPPGYD------SEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL-DDQKLDEAAIRLTELAYLY 403 (404)
T ss_dssp BSSEEEEECCTTCC------HHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS-CTTHHHHHHHHHHGGGGGG
T ss_pred cceEEEEeCCCCCC------HHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHhh
Confidence 99999999974321 236788888777999999998875456899999985 7889999999999877543
No 13
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=1.3e-46 Score=384.60 Aligned_cols=364 Identities=19% Similarity=0.335 Sum_probs=293.8
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC-CcEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP-DRIV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~-~~i~ 123 (483)
.++|+|+.+++.++ ++.+.+++.+.... ......|++..|..++|+++++++++.+| +++++ ++|+
T Consensus 28 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~----------~~~~~~y~~~~g~~~lr~~la~~~~~~~g--~~~~~~~~i~ 95 (422)
T 3fvs_A 28 HDVVNLGQGFPDFPPPDFAVEAFQHAVSG----------DFMLNQYTKTFGYPPLTKILASFFGELLG--QEIDPLRNVL 95 (422)
T ss_dssp SCCEECCCSSCSSCCCHHHHHHHHHHHHS----------CGGGGSCCCTTCCHHHHHHHHHHHHHHHT--CCCCHHHHEE
T ss_pred CCceEeCCCCCCCCCCHHHHHHHHHHHhC----------CCccCCCCCCCCCHHHHHHHHHHHHHhhC--CCCCCCCcEE
Confidence 36799999998764 45555555431100 01246799888999999999999998887 45677 6999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC----------CCCcccCHHHHHHHHHHH
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS----------SNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~----------~~~~~~d~~~l~~~i~~~ 193 (483)
+|+|+++++..++.+++++||+|+++.|+|..+...++.. |.+++.++++. +.+|.+|++.|++++++
T Consensus 96 ~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~- 173 (422)
T 3fvs_A 96 VTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMA-GGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS- 173 (422)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCT-
T ss_pred EECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHc-CCEEEEEecccccccccccccccCCCCCHHHHHhhcCC-
Confidence 9999999999999999999999999999999999988876 99999999875 23688999999988753
Q ss_pred HhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEE
Q 011570 194 QESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIV 273 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~ 273 (483)
++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++ ..+.++..+.. ..++++++
T Consensus 174 -----~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~-----~~~~~i~~ 242 (422)
T 3fvs_A 174 -----RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDG-HQHISIASLPG-----MWERTLTI 242 (422)
T ss_dssp -----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT-CCCCCGGGSTT-----TGGGEEEE
T ss_pred -----CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC-CCCCChhhccc-----ccCcEEEE
Confidence 78999999999999999999999999999999999999999999988876 55556665533 34789999
Q ss_pred ecCccccCCCCceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChh----HHHHHHHHHHHHHHHHHHHHH
Q 011570 274 YSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQ----FVEKFIAESAKRIAERHKAFT 347 (483)
Q Consensus 274 ~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~----~~~~~~~~~~~~l~~~~~~l~ 347 (483)
+|+||.+|++|+|+||+++ ++.+.+.+..... .+.++++.|.++..++.... ...+++++.++.++++++++.
T Consensus 243 ~S~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 321 (422)
T 3fvs_A 243 GSAGKTFSATGWKVGWVLG-PDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMI 321 (422)
T ss_dssp EEHHHHHTCGGGCCEEEEC-CHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred ecchhccCCccceEEEEEe-CHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 4555555544332 35578899998888876310 013456778889999999999
Q ss_pred HhhhcCCceeecCCceEEEeeecCchhhccC-------hHHHHHHHHHHHHhcCeEeeCCCCCCC-----CCCCEEEEEe
Q 011570 348 WGLSQVGIGCLKSNAGLFLWMDLHHLLKEQT-------YEAEMALWRVIINEVKLNVSPGSSFHC-----PNPGWFRVCF 415 (483)
Q Consensus 348 ~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~-------~~~~~~~~~~Ll~~~gV~v~pg~~f~~-----~~~~~iRis~ 415 (483)
+.|++.|+++..+.+|+|+|++++....... .....+++..+++++||.+.||+.|+. .+.+++||++
T Consensus 322 ~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~ 401 (422)
T 3fvs_A 322 RSLQSVGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCF 401 (422)
T ss_dssp HHHHTTTCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEEC
T ss_pred HHHHHcCCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEe
Confidence 9999999999999999999999875321000 000347788888888999999998863 3468999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHH
Q 011570 416 ANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 416 ~~~~~e~l~~~l~~L~~~l~~ 436 (483)
+. +++++++++++|++++++
T Consensus 402 ~~-~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 402 VK-DEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp CC-CHHHHHHHHHHHHHHHHC
T ss_pred cC-CHHHHHHHHHHHHHHHhh
Confidence 85 999999999999998764
No 14
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=2.6e-46 Score=380.70 Aligned_cols=359 Identities=21% Similarity=0.333 Sum_probs=290.2
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC-CcEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP-DRIV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~-~~i~ 123 (483)
.++|+|+.+++.++ ++.+.+++.+.... .....|++..|..++|+++|+++++.+| .++++ ++|+
T Consensus 23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~l~~~la~~~~~~~~--~~~~~~~~i~ 89 (410)
T 3e2y_A 23 PSVVNLGQGFPDISPPSYVKEELSKAAFI-----------DNMNQYTRGFGHPALVKALSCLYGKIYQ--RQIDPNEEIL 89 (410)
T ss_dssp TTSEECSSCCCCSCCCHHHHHHHHHHHTC-----------GGGGSCCCTTCCHHHHHHHHHHHHHHHT--SCCCTTTSEE
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhC-----------ccccCCCCCCChHHHHHHHHHHHHHHhC--CCCCCCCCEE
Confidence 47899999998765 45555555442110 1345798888999999999999998887 55677 8999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC---------CCCcccCHHHHHHHHHHHH
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS---------SNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~---------~~~~~~d~~~l~~~i~~~~ 194 (483)
+|+|+++++..++.+++++||+|+++.|+|..+...+... |.+++.++++. +.+|.+|++++++++.+
T Consensus 90 ~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~-- 166 (410)
T 3e2y_A 90 VAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMA-GAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSS-- 166 (410)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCT--
T ss_pred EeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHc-CCEEEEEeccccccccccccccCCcCCHHHHHhhcCC--
Confidence 9999999999999999999999999999999999988886 99999999862 24678999999988753
Q ss_pred hcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEe
Q 011570 195 ESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVY 274 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~ 274 (483)
++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++ ..+.++..+.. ..+++++++
T Consensus 167 ----~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~-----~~~~~i~~~ 236 (410)
T 3e2y_A 167 ----KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTG-HTHVKIATLPG-----MWERTITIG 236 (410)
T ss_dssp ----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT-CCCCCGGGSTT-----CGGGEEEEE
T ss_pred ----CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCC-CCCCCHHHcCC-----ccCeEEEEe
Confidence 78999999999999999999999999999999999999999999988776 55556665533 347899999
Q ss_pred cCccccCCCCceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCCh----hHHHHHHHHHHHHHHHHHHHHHH
Q 011570 275 SLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDD----QFVEKFIAESAKRIAERHKAFTW 348 (483)
Q Consensus 275 S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~----~~~~~~~~~~~~~l~~~~~~l~~ 348 (483)
||||.+|++|+|+||+++ ++.+.+.+..... .+.+++++|.++..++.+. ....+++++.++.++++++++.+
T Consensus 237 S~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 315 (410)
T 3e2y_A 237 SAGKTFSVTGWKLGWSIG-PAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVR 315 (410)
T ss_dssp EHHHHSSCGGGCCEEEEC-CHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred cchhhcCCCCceEEEEEE-CHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 5556555554433 3557889999888887530 00134567788889999999999
Q ss_pred hhhcCCceeecCCceEEEeeecCchhhcc-----ChHHHHHHHHHHHHhcCeEeeCCCCCCCC-----CCCEEEEEeccC
Q 011570 349 GLSQVGIGCLKSNAGLFLWMDLHHLLKEQ-----TYEAEMALWRVIINEVKLNVSPGSSFHCP-----NPGWFRVCFANM 418 (483)
Q Consensus 349 ~L~~~gi~~~~~~~g~f~~~~l~~~~~~~-----~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~-----~~~~iRis~~~~ 418 (483)
.|+++|+.+..+.+|+|+|++++...... ......+++..+++++||.+.||+.|+.. +.+++||+++.
T Consensus 316 ~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~- 394 (410)
T 3e2y_A 316 LLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIK- 394 (410)
T ss_dssp HHHTTTCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCC-
T ss_pred HHHHCCCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcC-
Confidence 99999999999999999999987532110 00123477888888889999999988653 35799999984
Q ss_pred CHHHHHHHHHHHHH
Q 011570 419 DDRTMEIALSRITS 432 (483)
Q Consensus 419 ~~e~l~~~l~~L~~ 432 (483)
+++++++++++|++
T Consensus 395 ~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 395 KDSTLDAAEEIFRA 408 (410)
T ss_dssp CHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999999975
No 15
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=1.1e-45 Score=373.99 Aligned_cols=349 Identities=21% Similarity=0.346 Sum_probs=280.0
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
..++|+|+.++++++ ++.+.+++.+... .....|++..|..++|+++++++++.+| +++++++|+
T Consensus 30 g~~~i~l~~g~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~v~ 95 (391)
T 3h14_A 30 GRRIIHMEVGQPGTGAPRGAVEALAKSLE------------TDALGYTVALGLPALRQRIARLYGEWYG--VDLDPGRVV 95 (391)
T ss_dssp TCCCEECCCSSCSSCSCHHHHHHHHHHHC----------------------CCHHHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCChHHHHHHHHHHHHHHhC--CCCCHHHEE
Confidence 357899999998876 4545555543111 1235788888999999999999998887 557889999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.+++++||+|+++.|+|..+...++.. |.+++.++++++++|.+|++.|+++ ++++|
T Consensus 96 ~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~---------~~~~v 165 (391)
T 3h14_A 96 ITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRAL-GLVPVDLPTAPENRLQPVPADFAGL---------DLAGL 165 (391)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHT-TCEEEEEECCGGGTTSCCHHHHTTS---------CCSEE
T ss_pred EecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHc-CCEEEEeecCcccCCCCCHHHHHhc---------CCeEE
Confidence 9999999999999999999999999999999999988886 9999999998777889999988764 57899
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++ . ..+...+ .+++++++|+||.+|++
T Consensus 166 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~-~~~~~~~--------~~~~i~~~s~sK~~g~~ 235 (391)
T 3h14_A 166 MVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEA-K-AVTALEL--------TDECYVINSFSKYFSMT 235 (391)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-C-CCCGGGT--------CSSSEEEEESSSTTCCT
T ss_pred EECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCC-C-CcChhhc--------CCCEEEEEechhccCCc
Confidence 999999999999999999999999999999999999999887765 3 2343332 36789999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcee-ecC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGC-LKS 360 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~-~~~ 360 (483)
|+|+||++++ +.+.+.+...... +.+++++|.++.+++... +++++.+++++++++.+.+.|+++|+.. ..+
T Consensus 236 G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 310 (391)
T 3h14_A 236 GWRVGWMVVP-EDQVRVVERIAQNMFICAPHASQVAALAALDCD----AELQANLDVYKANRKLMLERLPKAGFTRIAPP 310 (391)
T ss_dssp TSCCEEEECC-GGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTCH----HHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCC
T ss_pred cceeEEEEeC-HHHHHHHHHHHhhhccCCCHHHHHHHHHHhCCh----HHHHHHHHHHHHHHHHHHHHHHHcCCCcccCC
Confidence 9999999995 4455555443332 457888998888888743 4567788889999999999998887654 578
Q ss_pred CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC-CCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhh
Q 011570 361 NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC-PNPGWFRVCFANMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 361 ~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~-~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
.+++|+|++++.... +..+++..|++++||.++||+.|+. ..++++||+++. +++++++++++|++++++..
T Consensus 311 ~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~~~~~~ 383 (391)
T 3h14_A 311 DGAFYVYADVSDLTD-----DSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-ATADIEEGLDRLEAFMQARG 383 (391)
T ss_dssp CBTTEEEEECTTTCS-----CHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-CHHHHHHHHHHHHHHHHHC-
T ss_pred CeeEEEEEecCccCC-----CHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHhc
Confidence 888999999975211 1337888888878999999999986 356799999985 88999999999999988664
No 16
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=1.3e-45 Score=377.98 Aligned_cols=360 Identities=17% Similarity=0.314 Sum_probs=291.6
Q ss_pred CCCcccccchhhh-----hcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 45 PNGVIQMGLAENL-----LCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 45 ~~~~i~l~~~~n~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
..++|+|+.+.+. .+++.+.+++.+.... .....|++..|..++|+++|++++.. + .++++
T Consensus 53 ~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~~la~~~~~~-~--~~~~~ 118 (427)
T 3dyd_A 53 NKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDS-----------GKYNGYAPSIGFLSSREEIASYYHCP-E--APLEA 118 (427)
T ss_dssp TSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHH-----------CCSSSCCCTTCCHHHHHHHHHHHCBT-T--BCCCG
T ss_pred CCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhc-----------CcCCCCCCCCCcHHHHHHHHHHHhhc-C--CCCCh
Confidence 3567999998753 2345555555431100 12357988889999999999999864 4 55788
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
++|++|+|+++++..++.+++++||+|+++.|+|..+...++.. |.+++.++++++++|.+|++.+++++++ +
T Consensus 119 ~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~ 191 (427)
T 3dyd_A 119 KDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESM-GIEVKLYNLLPEKSWEIDLKQLEYLIDE------K 191 (427)
T ss_dssp GGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHT-TCEEEEEEEEGGGTTEECHHHHHSSCCT------T
T ss_pred HHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHc-CCEEEEEecccccCCCCCHHHHHHHhcc------C
Confidence 99999999999999999999999999999999999999888886 9999999998777889999999988753 6
Q ss_pred eeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccc
Q 011570 200 IKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKD 279 (483)
Q Consensus 200 ~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~ 279 (483)
+++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++ ..+.++..+.. ..++++++||||.
T Consensus 192 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g-~~~~~~~~~~~------~~~vi~~~S~sK~ 264 (427)
T 3dyd_A 192 TACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSD-CKYEPLATLST------DVPILSCGGLAKR 264 (427)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSS-CCCCCGGGGCS------SCCEEEEEESTTT
T ss_pred CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCC-CcCccHHHhCC------CCcEEEEeecccc
Confidence 8999999999999999999999999999999999999999999987776 55556555532 3568899999999
Q ss_pred cCCCCceEEEEEecC------hHHHHHHHHhh-hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 011570 280 MGFPGFRVGIIYSYN------DQVVSCARKMS-SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ 352 (483)
Q Consensus 280 ~g~~GlRiG~li~~~------~~l~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~ 352 (483)
||++|+|+||+++++ +.+.+.+.... ..+..++++|.++.+++.... .+++++.+++++++++++.+.|++
T Consensus 265 ~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~~--~~~~~~~~~~~~~~~~~l~~~L~~ 342 (427)
T 3dyd_A 265 WLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSILCRTP--GEFYHNTLSFLKSNADLCYGALAA 342 (427)
T ss_dssp SSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSC--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCcceEEEEecCcchhhHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999965 35555554432 345688999999998887321 344677788889999999999998
Q ss_pred C-CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHH
Q 011570 353 V-GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRIT 431 (483)
Q Consensus 353 ~-gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~ 431 (483)
+ |+.+..|.+|+|+|++++...... .....+++..|++++||.+.||..|+. ++++||+++ .+++++++++++|+
T Consensus 343 ~~g~~~~~p~~g~~~~~~l~~~~~~~-~~~~~~~~~~l~~~~gV~v~~g~~~~~--~~~iRis~~-~~~e~i~~~l~~l~ 418 (427)
T 3dyd_A 343 IPGLRPVRPSGAMYLMVGIEMEHFPE-FENDVEFTERLVAEQSVHCLPATCFEY--PNFIRVVIT-VPEVMMLEACSRIQ 418 (427)
T ss_dssp STTEEEECCSBTTEEEEEECGGGCTT-CSSHHHHHHHHHHHHCEECEEGGGGTC--TTEEEEESC-SCHHHHHHHHHHHH
T ss_pred CCCceecCCCeeEEEEEecCHhhcCC-CCCHHHHHHHHHHHCCEEEECCcccCC--CCeEEEEEC-CCHHHHHHHHHHHH
Confidence 8 899888999999999887321100 012347888888778999999998863 689999998 69999999999999
Q ss_pred HHHHHhh
Q 011570 432 SFMLKNV 438 (483)
Q Consensus 432 ~~l~~~~ 438 (483)
+++++.+
T Consensus 419 ~~l~~~~ 425 (427)
T 3dyd_A 419 EFCEQHY 425 (427)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9998764
No 17
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=1.2e-45 Score=371.68 Aligned_cols=347 Identities=17% Similarity=0.270 Sum_probs=281.5
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~ 123 (483)
.++|||+.++++++ ++.+.+++.+.... .....|++..|..+||+++|+++.+.+| ++++++ +|+
T Consensus 25 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~~~~~l~~~ia~~~~~~~g--~~~~~~~~v~ 91 (376)
T 2dou_A 25 VGLIDLSIGSTDLPPPEAPLKALAEALND-----------PTTYGYCLKSCTLPFLEEAARWYEGRYG--VGLDPRREAL 91 (376)
T ss_dssp CCCEECSSCCCCCCCCHHHHHHHHHHTTC-----------GGGSSCCCHHHHHHHHHHHHHHHHHHHS--CCCCTTTSEE
T ss_pred CCEEeccCCCCCCCCCHHHHHHHHHHHhC-----------CCcCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCccEE
Confidence 46799999988764 45566655442110 1245787766889999999999987777 445676 999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.+++++||+|+++.|+|+.+...++.. |.+++.+|+ +.+|.+|++.+++++.. ++++|
T Consensus 92 ~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~--~~~~~~d~~~l~~~l~~------~~~~v 162 (376)
T 2dou_A 92 ALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVA-SLRTFLIPL--REDGLADLKAVPEGVWR------EAKVL 162 (376)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHT-TCEEEEECB--CTTSSBCGGGSCHHHHH------HEEEE
T ss_pred EcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHc-CCEEEEeeC--CCCCCCCHHHHHHhhcc------CceEE
Confidence 9999999999999999999999999999999999988876 999999998 34678999999998864 78999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++ . ..++..+.. ..+++++++||||.+|++
T Consensus 163 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~-~~~~~~~~~-----~~~~~i~~~s~sK~~~~~ 235 (376)
T 2dou_A 163 LLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEG-E-APSPLALPG-----AKERVVELFSLSKSYNLA 235 (376)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSS-C-CCCGGGSTT-----GGGTEEEEEEHHHHHTCG
T ss_pred EECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-C-CCChhhcCC-----CCCcEEEEecchhhcCCh
Confidence 999999999999999999999999999999999999999876654 2 234333322 236789999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
|+|+||+++ ++.+.+.+...... ..+++++|.++..++... .+++++.++.++++++++.+.|.++ +++.++.
T Consensus 236 G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~ 310 (376)
T 2dou_A 236 GFRLGFALG-SEEALARLERVKGVIDFNQYAGVLRMGVEALKTP---KEVVRGYARVYRERALGMAEALKGV-LSLLPPR 310 (376)
T ss_dssp GGCCEEEEE-CHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSC---HHHHHHHHHHHHHHHHHHHHHHTTT-SEECCCC
T ss_pred hheeEEEec-CHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHh-cCccCCC
Confidence 999999998 56666665544332 347889999998888762 3457788888999999999999988 8888888
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
+|+|+|++++...+ ..++...|+++ ||.+.||..|+...++++||+++. +++++++++++|++++
T Consensus 311 ~~~~~~~~~~~~~~------~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~-~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 311 ATMYLWGRLPEGVD------DLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVR-PLEELLEAAKRIREAL 375 (376)
T ss_dssp BSSEEEEECCTTCC------HHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHTC
T ss_pred eeEEEEEECCCCCC------HHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence 89999999975322 23678888866 999999998875456899999984 8999999999998764
No 18
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=1.2e-45 Score=373.01 Aligned_cols=349 Identities=19% Similarity=0.285 Sum_probs=282.3
Q ss_pred Ccccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cEEE
Q 011570 47 GVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIVM 124 (483)
Q Consensus 47 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~i 124 (483)
++|+|+.+.+.++ ++.+.+++.+... .....|++..|..+||+++++++.+.+| .+++++ +|++
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~l~~~la~~l~~~~g--~~~~~~~~v~~ 96 (386)
T 1u08_A 31 QAINLSQGFPDFDGPRYLQERLAHHVA------------QGANQYAPMTGVQALREAIAQKTERLYG--YQPDADSDITV 96 (386)
T ss_dssp TCEECCCSSCSSCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHHHS--CCCCTTTTEEE
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHH------------hhccCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCCEEE
Confidence 5789999987654 4555555543100 0135788888899999999999988776 456788 9999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++.+++++||+|+++.|+|+.+...++.. |.+++.++++++ +|.+|+++|++++. .++++|+
T Consensus 97 ~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~~-~~~~d~~~l~~~l~------~~~~~v~ 168 (386)
T 1u08_A 97 TAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALS-GGIVKRMALQPP-HFRVDWQEFAALLS------ERTRLVI 168 (386)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECCTT-TCCCCHHHHHHHCC------TTEEEEE
T ss_pred cCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHc-CCEEEEeecCcc-cCcCCHHHHHHhhc------ccCEEEE
Confidence 999999999999999999999999999999999988876 999999998754 57899999999885 2789999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
+++||||||.++|.+++++|+++|+++|++||+||+|.++.|++ ..+.++..+.. ..+++++++|+||.+|++|
T Consensus 169 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~-----~~~~~i~~~s~sK~~~~~G 242 (386)
T 1u08_A 169 LNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQ-QGHASVLAHPQ-----LRERAVAVSSFGKTYHMTG 242 (386)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCS-SCCCCGGGSHH-----HHTTEEEEEEHHHHTTCGG
T ss_pred EeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCC-CCCcChhcccC-----ccCcEEEEecchhhcCCcc
Confidence 99999999999999999999999999999999999999887765 43445544421 1368899999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCc
Q 011570 285 FRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNA 362 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~ 362 (483)
+|+||++++ +.+.+.+..... .+.+++++|.++..++... .+++++.+++++++++++.+.|++.|+++..+.+
T Consensus 243 ~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 318 (386)
T 1u08_A 243 WKVGYCVAP-APISAEIRKVHQYLTFSVNTPAQLALADMLRAE---PEHYLALPDFYRQKRDILVNALNESRLEILPCEG 318 (386)
T ss_dssp GCCEEEECC-HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC---THHHHTHHHHHHHHHHHHHHHTTSSSCEECCCCB
T ss_pred cceEEEEcC-HHHHHHHHHHHHhhccCCChHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCc
Confidence 999999994 666665554332 3457888888888887642 3456778888999999999999998999888888
Q ss_pred eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC--CCCCEEEEEeccCCHHHHHHHHHHHHH
Q 011570 363 GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC--PNPGWFRVCFANMDDRTMEIALSRITS 432 (483)
Q Consensus 363 g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~--~~~~~iRis~~~~~~e~l~~~l~~L~~ 432 (483)
|+|+|++++.... .+..+++..|++++||.+.||..|+. ..++++||+++ .+++++++++++|++
T Consensus 319 g~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~-~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 319 TYFLLVDYSAVST----LDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFA-KKESTLLAAAERLRQ 385 (386)
T ss_dssp SSEEEEECTTTCC----SCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECC-SCHHHHHHHHHHHTT
T ss_pred eEEEEEecCCCCC----CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEc-CCHHHHHHHHHHHhh
Confidence 9999999975300 01236788888778999999988864 24679999998 489999999999864
No 19
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=3.6e-45 Score=374.52 Aligned_cols=329 Identities=17% Similarity=0.245 Sum_probs=267.3
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhhCCCCCcC-------CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH
Q 011570 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFD-------PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD 159 (483)
Q Consensus 87 ~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~-------~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~ 159 (483)
..+|++..|+++||++|++++.+.+| ++.+ +++|++|+|+++++..++.++++|||+|++++|+|..+...
T Consensus 71 ~~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~ 148 (425)
T 2r2n_A 71 ALQYSPSAGIPELLSWLKQLQIKLHN--PPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQS 148 (425)
T ss_dssp HTSCCCTTCCHHHHHHHHHHHHHHHC--CTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH
T ss_pred hcCCCCCCCCHHHHHHHHHHHHHhcC--CCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH
Confidence 45799999999999999999988877 3332 37999999999999999999999999999999999999998
Q ss_pred HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH------hcCCceeEEEE-eCCCCCCcCCCCHHHHHHHHHHHhhcC
Q 011570 160 LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ------ESNIRIKGVLI-TNPSNPLGTFLDRETLKDIVSFINEKN 232 (483)
Q Consensus 160 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~------~~~~~~~~i~l-~~P~NPtG~~~~~~~l~~i~~~a~~~~ 232 (483)
++.. |.+++.++++++ .+|++.|+++++++. ..+.++++|++ ++||||||.+++.+++++|+++|++||
T Consensus 149 ~~~~-g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~ 224 (425)
T 2r2n_A 149 LHPL-GCNIINVASDES---GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYD 224 (425)
T ss_dssp HGGG-TCEEEEECEETT---EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTT
T ss_pred HHHc-CCEEEEeCcCCC---CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcC
Confidence 8876 999999998653 489999999886321 00135788866 689999999999999999999999999
Q ss_pred cEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh--cCCC
Q 011570 233 IHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS--FGLV 310 (483)
Q Consensus 233 ~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~--~~~~ 310 (483)
++||+||+|.++.|++ ..+.++.++. ..+++++++||||+++ +|+|+||++++ +.+.+.+..... .+.+
T Consensus 225 ~~li~De~~~~~~~~g-~~~~~~~~~~------~~~~~i~~~s~SK~~~-~GlRiG~~~~~-~~l~~~l~~~~~~~~~~~ 295 (425)
T 2r2n_A 225 FLIIEDDPYYFLQFNK-FRVPTFLSMD------VDGRVIRADSFSKIIS-SGLRIGFLTGP-KPLIERVILHIQVSTLHP 295 (425)
T ss_dssp CEEEEECTTGGGBSSS-SCCCCTGGGC------TTSCEEEEEESTTTTC-STTCCEEEEEE-HHHHHHHHHHHHTTTCSS
T ss_pred CEEEEECCcccccCCC-CCCCCccccC------CCCCEEEEccchhhcc-CccceEEEecC-HHHHHHHHHHHHHhcCCC
Confidence 9999999999887876 4445665553 2468999999999998 99999999995 556655544332 2557
Q ss_pred ChHHHHHHHHhcCCh--hHHHHHHHHHHHHHHHHHHHHHHhhhcC--Cc-eeecCCceEEEeeecCchhhccChHHHHHH
Q 011570 311 SSQTQHLIATMLSDD--QFVEKFIAESAKRIAERHKAFTWGLSQV--GI-GCLKSNAGLFLWMDLHHLLKEQTYEAEMAL 385 (483)
Q Consensus 311 s~~~q~~~~~~l~~~--~~~~~~~~~~~~~l~~~~~~l~~~L~~~--gi-~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~ 385 (483)
++++|.++..++... +.+.+++++.++.++++++++.+.|++. |+ .+..|.+|+|+|++++...+. .++
T Consensus 296 ~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~~~------~~~ 369 (425)
T 2r2n_A 296 STFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDV------KEL 369 (425)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCSCC------HHH
T ss_pred CHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCCCH------HHH
Confidence 899999999888751 2235778888999999999999999874 76 566788999999999853221 143
Q ss_pred HHHHHHhcCeEeeCCCCCCCC---CCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 386 WRVIINEVKLNVSPGSSFHCP---NPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 386 ~~~Ll~~~gV~v~pg~~f~~~---~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
+...+.++||.+.||+.|+.. ..+++||+++..+++++++++++|++++++
T Consensus 370 ~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 370 IEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp HHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 333445779999999998754 357999999856999999999999998865
No 20
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=1.4e-45 Score=374.15 Aligned_cols=357 Identities=16% Similarity=0.207 Sum_probs=287.5
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
+.++++|+.++++++ ++.+.+++.+... .....|++. ..++|+++++++.+.+| +++++++|+
T Consensus 30 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~--~~~l~~~la~~l~~~~g--~~~~~~~v~ 93 (399)
T 1c7n_A 30 GNEVVPLSVADMEFKNPPELIEGLKKYLD------------ETVLGYTGP--TEEYKKTVKKWMKDRHQ--WDIQTDWII 93 (399)
T ss_dssp CTTCCCCCSSSCSSCCCHHHHHHHHHHHH------------HCCCSSBCC--CHHHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCCceeeeecCCCCCCCHHHHHHHHHHHh------------cCCCCCCCC--cHHHHHHHHHHHHHHhC--CCCChhhEE
Confidence 357899999988764 4555555543110 123567764 79999999999987776 446788999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecC-CCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCD-SSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
+|+|+++++..++.+++++||+|+++.|+|+.+...+... |.+++.+|++ ++++|.+|++.|++++++ .++++
T Consensus 94 ~t~g~~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~g~~~~d~~~l~~~l~~-----~~~~~ 167 (399)
T 1c7n_A 94 NTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQ-ERKIIECELLEKDGYYTIDFQKLEKLSKD-----KNNKA 167 (399)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTT-TCEEEECCCEEETTEEECCHHHHHHHHTC-----TTEEE
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHc-CCEEEecccccCCCCEEEcHHHHHHHhcc-----CCCcE
Confidence 9999999999999999999999999999999999988875 9999999986 334678999999999862 27899
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
|++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++ ..+.++..+... ..++++++.|+||.+|+
T Consensus 168 v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~----~~~~~i~~~s~sK~~~~ 242 (399)
T 1c7n_A 168 LLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPG-YEHTVFQSIDEQ----LADKTITFTAPSKTFNI 242 (399)
T ss_dssp EEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTT-CCCCCGGGSCHH----HHTTEEEEECSHHHHTC
T ss_pred EEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCcccHHHcCcc----ccCcEEEEEeChhhccc
Confidence 9999999999999999999999999999999999999999887765 444455444210 02678999999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhhhc---CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc-C-Ccee
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSSF---GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ-V-GIGC 357 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~-gi~~ 357 (483)
+|+|+||++++++.+.+.+...... ..+++++|.++.+++... .+++++.++.++++++++.+.|++ + |+.+
T Consensus 243 ~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 319 (399)
T 1c7n_A 243 AGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKEC---GKWLDGCIKVIDKNQRIVKDFFEVNHPEIKA 319 (399)
T ss_dssp GGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCTTSBC
T ss_pred cchheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 9999999999656666665554332 256888998888777642 345777888899999999999988 6 8888
Q ss_pred ecCCceEEEeeecCch-hhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 358 LKSNAGLFLWMDLHHL-LKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 358 ~~~~~g~f~~~~l~~~-~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
.++.+++++|++++.. .+ ..+++..|++++||.+.||..|+...++++||+++. +++++++++++|++++++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~ 392 (399)
T 1c7n_A 320 PLIEGTYLQWIDFRALKMD------HKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA-PSSVIQESLERLNKALKD 392 (399)
T ss_dssp CCCSBSSEEEEECGGGCCC------HHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHH
T ss_pred ecCCceEEEEEEcccCCCC------HHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc-CHHHHHHHHHHHHHHHHH
Confidence 8899999999999742 11 236788887678999999998875557899999984 689999999999999987
Q ss_pred hh
Q 011570 437 NV 438 (483)
Q Consensus 437 ~~ 438 (483)
.+
T Consensus 393 ~~ 394 (399)
T 1c7n_A 393 LK 394 (399)
T ss_dssp HC
T ss_pred HH
Confidence 64
No 21
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=8.6e-45 Score=365.21 Aligned_cols=344 Identities=15% Similarity=0.191 Sum_probs=281.2
Q ss_pred Ccccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEe
Q 011570 47 GVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMS 125 (483)
Q Consensus 47 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it 125 (483)
++|||+.++++++ ++.+.+++.+.. .....|++..|..++|+++|+++.+.+| +++++++|++|
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~~-------------~~~~~y~~~~g~~~lr~~la~~l~~~~g--~~~~~~~i~~t 88 (376)
T 3ezs_A 24 RGLDLGIGEPQFETPKFIQDALKNHT-------------HSLNIYPKSAFEESLRAAQRGFFKRRFK--IELKENELIST 88 (376)
T ss_dssp CCCBCSSCCCCSCCCHHHHHHHHTTG-------------GGGGSCCCTTCCHHHHHHHHHHHHHHHS--CCCCGGGEEEE
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHhh-------------hhcCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCHHHEEEC
Confidence 7899999998875 566667665521 2456899888999999999999988877 44588999999
Q ss_pred CChhHHHHHHHHHhcCC--CCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 126 GGATGAHETVAFCLADP--GDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 126 ~G~~~al~~~~~~l~~~--gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+++++..++.+++++ ||+|+++.|+|..+...++.. |.+++.+++++++++.+ .+++++.+ ++++|
T Consensus 89 ~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~---~l~~~~~~------~~~~v 158 (376)
T 3ezs_A 89 LGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFI-KAKSLLMPLTKENDFTP---SLNEKELQ------EVDLV 158 (376)
T ss_dssp SSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHT-TCEEEEEECCGGGTSCC---CCCHHHHH------HCSEE
T ss_pred cCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHc-CCEEEEcccCCCCCcch---hHHhhhcc------CCCEE
Confidence 99999999999999999 999999999999999988876 99999999987655544 56666654 68899
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++ . +.++......+.....+++++++||||.+|++
T Consensus 159 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 236 (376)
T 3ezs_A 159 ILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENT-P-PPSLLEACMLAGNEAFKNVLVIHSLSKRSSAP 236 (376)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSS-C-CCCHHHHHHHTTCTTCTTEEEEEESTTTTTCG
T ss_pred EEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC-C-CCCHHHccccccccccCcEEEEecchhccCCc
Confidence 999999999999999999999999999999999999999977765 3 34554432100000247899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
|+|+||+++ ++.+.+.+..... .+.+++++|.++.+++...++ +++.+++++++++++.+.|+ ++. .+.
T Consensus 237 G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~l~--~~~--~~~ 307 (376)
T 3ezs_A 237 GLRSGFIAG-DSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRH----AEFFRNIYANNLKLARKIFK--NTL--IYP 307 (376)
T ss_dssp GGCCEEEEE-CHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSHH----HHHHHHHHHHHHHHHHHHST--TCC--CCS
T ss_pred cceeEEEee-CHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcHH----HHHHHHHHHHHHHHHHHHhc--CCC--CCC
Confidence 999999998 5666666655443 245788999998888877543 67778889999999999998 665 678
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCC--CCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFH--CPNPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~--~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
+|+|+|++++. ..+++..|++++||.+.||+.|+ ...++++||+++. +++++++++++|++++++
T Consensus 308 ~~~~~~~~~~~---------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 308 YSFYVYLPVQN---------GENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY-DTPLLEKPLEIIETYREN 374 (376)
T ss_dssp BSSEEEEECSC---------HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS-CHHHHHHHHHHHHHHHCC
T ss_pred cceEEEEECCC---------HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence 88999999972 23678888876799999999987 3456899999984 999999999999998754
No 22
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=2.6e-45 Score=370.73 Aligned_cols=354 Identities=18% Similarity=0.355 Sum_probs=285.6
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|+|+.++++++ ++.+.+++.+... .....|++..|..++|+++++++++.+| +++++++|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~l~~~la~~~~~~~g--~~~~~~~v~~ 95 (388)
T 1j32_A 30 IDVCSFSAGEPDFNTPKHIVEAAKAALE------------QGKTRYGPAAGEPRLREAIAQKLQRDNG--LCYGADNILV 95 (388)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHHHC--CCCCGGGEEE
T ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHhcC--CCCChhhEEE
Confidence 46789999988764 4445554433100 0134688888999999999999998777 4467889999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++.+++++||+|+++.|+|+.+...++.. |.+++.++++++.+|.+|++.|++++++ ++++|+
T Consensus 96 ~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~ 168 (388)
T 1j32_A 96 TNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLA-EGTPVILPTTVETQFKVSPEQIRQAITP------KTKLLV 168 (388)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHT-TCEEEEECCCGGGTTCCCHHHHHHHCCT------TEEEEE
T ss_pred cCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHc-CCEEEEecCCcccCCCCCHHHHHHhcCc------CceEEE
Confidence 999999999999999999999999999999999888875 9999999987655788999999998853 789999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
+++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+++ ..+.++..+..+ ..+++++++|+||.+|++|
T Consensus 169 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~s~sK~~~~~G 243 (388)
T 1j32_A 169 FNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDD-AQHLSIGAASPE----AYERSVVCSGFAKTYAMTG 243 (388)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT-CCCCCGGGSCHH----HHHTEEEEEESTTTTTCTT
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCCHHHcccc----ccCCEEEEeechhccCCcc
Confidence 99999999999999999999999999999999999999987765 444455444210 0257899999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCC
Q 011570 285 FRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSN 361 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~ 361 (483)
+|+||+++ ++.+.+.+..... .+.+++++|.++..++... .+++++.+++++++++++.+.|+++ |+++..+.
T Consensus 244 ~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 319 (388)
T 1j32_A 244 WRVGFLAG-PVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENS---QDCVQEMLAAFAERRRYMLDALNAMPGLECPKPD 319 (388)
T ss_dssp TCCEEEEC-CHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSC---SHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCC
T ss_pred cceEEEEe-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCC
Confidence 99999999 5556665554433 2457788888887777532 2346777888899999999999988 89888888
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
+++|+|++++.. . . +..+++..|++++||.+.||..|+. ++++||+++ .+++++++++++|++++++.
T Consensus 320 ~~~~~~~~~~~~-~-~---~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~-~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 320 GAFYMFPSIAKT-G-R---SSLDFCSELLDQHQVATVPGAAFGA--DDCIRLSYA-TDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp BTTEECCBCGGG-T-C---CHHHHHHHHHHHHCEECEEGGGGTC--TTBEEEECC-SCHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEecCCC-C-C---CHHHHHHHHHHhCCEEEeChhhhCC--CCcEEEEec-CCHHHHHHHHHHHHHHHHHh
Confidence 999999988641 0 0 1336788888767999999988863 578999998 68999999999999988653
No 23
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=1.6e-45 Score=377.43 Aligned_cols=363 Identities=18% Similarity=0.273 Sum_probs=288.1
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~ 123 (483)
.++|+|+.+.+.++ ++.+.+++.+.... . ......|++..|..+||+++++++.+.+| .+++++ +|+
T Consensus 37 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----~----~~~~~~y~~~~g~~~l~~~la~~l~~~~g--~~~~~~~~v~ 105 (429)
T 1yiz_A 37 YKPLNLGQGFPDYHAPKYALNALAAAANS-----P----DPLANQYTRGFGHPRLVQALSKLYSQLVD--RTINPMTEVL 105 (429)
T ss_dssp HCCEECCSSSCSSCCCHHHHHHHHHHHTC-----S----CGGGGSCCCSSCCHHHHHHHHHHHHHHHT--SCCCTTTSEE
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhc-----c----ccCccCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCcCCEE
Confidence 36789999987654 44555555431110 0 01245788888899999999999987776 456788 999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCC--------CcccCHHHHHHHHHHHHh
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSN--------DFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~--------~~~~d~~~l~~~i~~~~~ 195 (483)
+|+|+++++..++.+++++||+|+++.|+|+.+...++.. |.+++.+|++.+. +|.+|++.|++++.+
T Consensus 106 ~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--- 181 (429)
T 1yiz_A 106 VTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAA-GGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE--- 181 (429)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCT---
T ss_pred EecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHc-CCEEEEEeCCcccccccccccCcccCHHHHHHHhcc---
Confidence 9999999999999999999999999999999999988875 9999999987643 578999999998852
Q ss_pred cCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEec
Q 011570 196 SNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYS 275 (483)
Q Consensus 196 ~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S 275 (483)
++++|++++|+||||.++|.+++++|+++|++||++||+||+|.++.+++ ..+.++..+.. ..++++++.|
T Consensus 182 ---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~-----~~~~~~~~~s 252 (429)
T 1yiz_A 182 ---KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEP-FEHIRICTLPG-----MWERTITIGS 252 (429)
T ss_dssp ---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT-SCCCCGGGSTT-----TGGGEEEEEE
T ss_pred ---CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCC-CCCcChhhccC-----CcCceEEEec
Confidence 78999999999999999999999999999999999999999999987765 44445544421 2368899999
Q ss_pred CccccCCCCceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCC-----hhHHHHHHHHHHHHHHHHHHHHHH
Q 011570 276 LSKDMGFPGFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSD-----DQFVEKFIAESAKRIAERHKAFTW 348 (483)
Q Consensus 276 ~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~-----~~~~~~~~~~~~~~l~~~~~~l~~ 348 (483)
+||.+|++|+|+||+++ ++.+.+.+..... .+.+++++|.++.++|.. ..+ .+++++.++.++++++++.+
T Consensus 253 ~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ 330 (429)
T 1yiz_A 253 AGKTFSLTGWKIGWAYG-PEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSP-ECYFNSISGELMAKRDYMAS 330 (429)
T ss_dssp HHHHHTCGGGCCEEEES-CHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTST-TSHHHHHHHHHHHHHHHHHH
T ss_pred chhccCCCCcceEEEEe-CHHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccch-HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 4666666554332 355788999888888765 211 34577788889999999999
Q ss_pred hhhcCCceeecCCceEEEeeecCchhh------ccChHHHHHHHHHHHHhcCeEeeCCCCCCCC-----CCCEEEEEecc
Q 011570 349 GLSQVGIGCLKSNAGLFLWMDLHHLLK------EQTYEAEMALWRVIINEVKLNVSPGSSFHCP-----NPGWFRVCFAN 417 (483)
Q Consensus 349 ~L~~~gi~~~~~~~g~f~~~~l~~~~~------~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~-----~~~~iRis~~~ 417 (483)
.|.++|+++..+.+|+|+|++++.... .....+..+++..|++++||.+.||..|+.. .++++||+++
T Consensus 331 ~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~- 409 (429)
T 1yiz_A 331 FLAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFF- 409 (429)
T ss_dssp HHHHHTCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECC-
T ss_pred HHHhCCCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEec-
Confidence 998889998888889999999975310 0000123477888887789999999888642 2679999998
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 011570 418 MDDRTMEIALSRITSFML 435 (483)
Q Consensus 418 ~~~e~l~~~l~~L~~~l~ 435 (483)
.+++++++++++|+++++
T Consensus 410 ~~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 410 KKDENLQKAAEILRKWKG 427 (429)
T ss_dssp SCHHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHhcc
Confidence 489999999999998764
No 24
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=4e-45 Score=372.86 Aligned_cols=363 Identities=21% Similarity=0.359 Sum_probs=284.5
Q ss_pred CCCCcccccchhhh----h-cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhh------hC
Q 011570 44 NPNGVIQMGLAENL----L-CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKV------RG 112 (483)
Q Consensus 44 ~~~~~i~l~~~~n~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~------~g 112 (483)
++.++|+|+.+.+. + +++.+.+++.+... . .....|++..|..+||+++|+++++. .|
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~----------~-~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~ 99 (416)
T 1bw0_A 31 SPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAID----------S-QECNGYFPTVGSPEAREAVATWWRNSFVHKEELK 99 (416)
T ss_dssp SCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHH----------T-TCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTG
T ss_pred cCCCeEEecCcCCCcccCCCCCHHHHHHHHHHhh----------C-CccCCcCCCCCCHHHHHHHHHHHHhhhcccccCC
Confidence 34678999988742 2 34555555543110 0 12357888889999999999999832 33
Q ss_pred CCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHH
Q 011570 113 NRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEK 192 (483)
Q Consensus 113 ~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~ 192 (483)
+++++++|++|+|+++++..++.+++++||+|+++.|+|+.+...++.. |.+++.++++++.+|.+|++.|++++.+
T Consensus 100 --~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 176 (416)
T 1bw0_A 100 --STIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAY-GIGMHFYNCRPENDWEADLDEIRRLKDD 176 (416)
T ss_dssp --GGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHT-TCEEEEEEEEGGGTTEECHHHHHHHCCT
T ss_pred --CCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHc-CcEEEEeecCcccCCCCCHHHHHHHhcc
Confidence 5567899999999999999999999999999999999999999888875 9999999987655688999999998753
Q ss_pred HHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCC----CcchHHHhhhhccccCCC
Q 011570 193 AQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKES----SFVSIAEIIDQDIACNRN 268 (483)
Q Consensus 193 ~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~----~~~s~~~l~~~~~~~~~~ 268 (483)
++++|++++|+||||.+++.+++++|+++|+++|++||+||+|.++.|++ . .+.++..+. ..+
T Consensus 177 ------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~------~~~ 243 (416)
T 1bw0_A 177 ------KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKG-KDPNATFTSVADFE------TTV 243 (416)
T ss_dssp ------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCS-SCTTCCCCCTTSSC------CSC
T ss_pred ------CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCCCCccCHHHcc------CCC
Confidence 68899999999999999999999999999999999999999999977765 3 344444332 234
Q ss_pred eEEEEecCccccCCCCceEEEEEecCh-----HHHHHHHHhh-hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 011570 269 LIHIVYSLSKDMGFPGFRVGIIYSYND-----QVVSCARKMS-SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAER 342 (483)
Q Consensus 269 ~vi~~~S~SK~~g~~GlRiG~li~~~~-----~l~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~ 342 (483)
++++++||||.|+++|+|+||++++++ .+........ ..+.+++++|.++.+++.... ..++++.+++++++
T Consensus 244 ~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~ 321 (416)
T 1bw0_A 244 PRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTP--QEHLDQIVAKIEES 321 (416)
T ss_dssp CEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSC--HHHHHHHHHHHHHH
T ss_pred cEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhccc--HHHHHHHHHHHHHH
Confidence 689999999999999999999999664 2332222222 235588899999988887422 33467777888999
Q ss_pred HHHHHHhhhcC-CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHH
Q 011570 343 HKAFTWGLSQV-GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDR 421 (483)
Q Consensus 343 ~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e 421 (483)
++++.+.|+++ |+.+..+.+|+|+|++++..... ...+..+++..|++++||.++||..|+. ++++||+++ .+++
T Consensus 322 ~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~f~~--~~~iRis~~-~~~e 397 (416)
T 1bw0_A 322 AMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYR-DIKTDVEFFEKLLEEENVQVLPGTIFHA--PGFTRLTTT-RPVE 397 (416)
T ss_dssp HHHHHHHHTTSTTEEECCCCBTTEEEEEECGGGBS-SCCSHHHHHHHHHHHHCEECEEGGGGTC--TTEEEEECC-SCHH
T ss_pred HHHHHHHHHhCCCCcccCCCeeEEEEEeCCHHHcC-CCCCHHHHHHHHHHHCCEEEecccccCC--CCeEEEEec-CCHH
Confidence 99999999988 88888788889999988642000 0011346788887778999999998863 579999997 6899
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 011570 422 TMEIALSRITSFMLKNVE 439 (483)
Q Consensus 422 ~l~~~l~~L~~~l~~~~~ 439 (483)
++++++++|.+++++.++
T Consensus 398 ~l~~~l~~l~~~l~~~~~ 415 (416)
T 1bw0_A 398 VYREAVERIKAFCQRHAA 415 (416)
T ss_dssp HHHHHHHHHHHHHHHHBC
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 999999999999987654
No 25
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=4.5e-45 Score=368.88 Aligned_cols=356 Identities=17% Similarity=0.218 Sum_probs=292.1
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|+|+.+++.++ ++.+.+++.+... .....|++. ..++++++++++.+.+| +++++++|++
T Consensus 27 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~--~~~l~~~la~~l~~~~g--~~~~~~~i~~ 90 (391)
T 3dzz_A 27 EKELPMWIAEMDFKIAPEIMASMEEKLK------------VAAFGYESV--PAEYYKAVADWEEIEHR--ARPKEDWCVF 90 (391)
T ss_dssp TTCEECCSSCCSSCCCHHHHHHHHHHHT------------TCCCCCBCC--CHHHHHHHHHHHHHHHS--CCCCGGGEEE
T ss_pred CCceeccccCCCCCCCHHHHHHHHHHHh------------cCcCCCCCC--CHHHHHHHHHHHHHHhC--CCCCHHHEEE
Confidence 47899999987775 4555565544111 123467665 69999999999998887 4578899999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecC-CCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCD-SSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
|+|+++++..++.+++++||+|+++.|+|..+...++.. |.+++.++++ ++++|.+|++.|++++++ .++++|
T Consensus 91 ~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~~v 164 (391)
T 3dzz_A 91 ASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSVIEGN-GRRVISSDLIYENSKYSVNWADLEEKLAT-----PSVRMM 164 (391)
T ss_dssp ESCHHHHHHHHHHHHSCTTCEEEECSSCCHHHHHHHHHT-TCEEEECCCEEETTEEECCHHHHHHHHTS-----TTEEEE
T ss_pred CCCHHHHHHHHHHHhCCCCCeEEECCCCcHHHHHHHHHc-CCEEEEeeeeecCCceeecHHHHHHHHhc-----cCceEE
Confidence 999999999999999999999999999999999988876 9999999986 456788999999999863 378999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++||||||.+++.+++++|+++|++||+++|+||+|.++.+.+ ..+.++..+... ..++++++.|+||.+|++
T Consensus 165 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~----~~d~~i~~~s~sK~~g~~ 239 (391)
T 3dzz_A 165 VFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTD-EDITPAFTVDWD----AKNWVVSLISPSKTFNLA 239 (391)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCCGGGSCTT----TGGGEEEEECSHHHHTCT
T ss_pred EEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCC-CCceehhhcCcc----ccCcEEEEEeChhhcccc
Confidence 999999999999999999999999999999999999999887765 455566555320 146899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhh---hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc-C-Cceee
Q 011570 284 GFRVGIIYSYNDQVVSCARKMS---SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ-V-GIGCL 358 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~---~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~-gi~~~ 358 (483)
|+|+||++++++.+.+.+.... ..+..+++++.++..++... .+++++.+++++++++++.+.|++ + |+++.
T Consensus 240 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 316 (391)
T 3dzz_A 240 ALHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEG---HDWLRELKQVLRDNFAYAREFLAKEVPEVKVL 316 (391)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEC
T ss_pred chhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEe
Confidence 9999999996577776665542 23457888888887777542 345777888899999999999998 4 89999
Q ss_pred cCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 359 KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 359 ~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
.+.+++++|++++.... ...++.+.|++++||.++||+.|+..+++++||+++ .+++++++++++|++++++.
T Consensus 317 ~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 317 DSNASYLAWVDISALGM-----NAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA-CPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp CCCBSSEEEEECGGGCS-----CHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC-SCHHHHHHHHHHHHHHHHTC
T ss_pred ccCceEEEEEehhhcCC-----CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec-CCHHHHHHHHHHHHHHHHHh
Confidence 99999999999975210 133778888767799999999998766789999998 68999999999999998764
No 26
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=5.5e-45 Score=369.57 Aligned_cols=347 Identities=21% Similarity=0.415 Sum_probs=277.2
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|+|+.+.+.++ ++.+.+++.+.... . .......|++..|..+||+++++++.+.+| +++++++|++
T Consensus 35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~------~--~~~~~~~y~~~~g~~~lr~~la~~l~~~~g--~~~~~~~i~~ 104 (398)
T 3ele_A 35 ENVYDFSIGNPSIPAPQIVNDTIKELVTD------Y--DSVALHGYTSAQGDVETRAAIAEFLNNTHG--THFNADNLYM 104 (398)
T ss_dssp GGCEECCSCCCCSCCCHHHHHHHHHHHHH------S--CHHHHHSCCCTTCCHHHHHHHHHHHHHHHC--CCCCGGGEEE
T ss_pred CCeEEeecCCCCCCCCHHHHHHHHHHHhc------C--CccccCCcCCCCCcHHHHHHHHHHHHHHhC--CCCChHHEEE
Confidence 46789999876553 45555555431000 0 001146798888999999999999998887 5578999999
Q ss_pred eCChhHHHHHHHHHhcCCC-CeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 125 SGGATGAHETVAFCLADPG-DAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~g-d~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
|+|+++++..++.+++++| |+|+++.|+|..+...++.. |.+++.+|++++ +|.+|+++|++++.+ ++++|
T Consensus 105 ~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~~-~~~~d~~~l~~~l~~------~~~~v 176 (398)
T 3ele_A 105 TMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAA-GARLVEVPADTE-HFQIDFDALEERINA------HTRGV 176 (398)
T ss_dssp ESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHT-TCEEEEECCCTT-TSSCCHHHHHHTCCT------TEEEE
T ss_pred ccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHc-CCEEEEEecCCc-CCcCCHHHHHHHhCc------CCCEE
Confidence 9999999999999999999 99999999999999988876 999999998753 688999999998853 78999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhh------cCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCc
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINE------KNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLS 277 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~------~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~S 277 (483)
++++||||||.+++.+++++|+++|++ +|++||+||+|.++.+++ ........ ..+++++++|+|
T Consensus 177 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~--------~~~~~i~~~s~s 247 (398)
T 3ele_A 177 IINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDG-IKVPFVTK--------YYDNTLVCYSYS 247 (398)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTT-CCCCCGGG--------TCSSEEEEEEST
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCC-CCcCChHh--------hcCCeEEEEehh
Confidence 999999999999999999999999999 999999999999987765 33333222 247889999999
Q ss_pred cccCCCCceEEEEEecChH-----HHHHHHHhh---hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHh
Q 011570 278 KDMGFPGFRVGIIYSYNDQ-----VVSCARKMS---SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWG 349 (483)
Q Consensus 278 K~~g~~GlRiG~li~~~~~-----l~~~~~~~~---~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~ 349 (483)
|.+|++|+|+||++++++. +...+.... ....++.++|.++..++.+.. .++.++++++++.+.
T Consensus 248 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--------~~~~~~~~~~~l~~~ 319 (398)
T 3ele_A 248 KSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG--------DINAYKENRDLLYEG 319 (398)
T ss_dssp TTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC--------CHHHHHHHHHHHHHH
T ss_pred hcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH--------HHHHHHHHHHHHHHH
Confidence 9999999999999996552 233322221 234467788888888887643 234567778888888
Q ss_pred hhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHH
Q 011570 350 LSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSR 429 (483)
Q Consensus 350 L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~ 429 (483)
|+++|+++..+.+|+|+|++++.. + ..++++.| .++||.++||..|+. ++++||+++ .+++++++++++
T Consensus 320 L~~~g~~~~~~~~~~~~~~~~~~~-~------~~~~~~~l-~~~gi~v~~g~~~~~--~~~iRis~~-~~~e~i~~~l~~ 388 (398)
T 3ele_A 320 LTRIGYHCFKPDGAFYMFVKALED-D------SNAFCEKA-KEEDVLIVAADGFGC--PGWVRISYC-VDREMIKHSMPA 388 (398)
T ss_dssp HHHHTCCEECCSBSSEEEEECSSS-C------HHHHHHHH-HTTTEECEESGGGTC--TTEEEEECC-SCHHHHHHHHHH
T ss_pred HHHcCCeecCCCeeEEEEEEcCCC-C------HHHHHHHH-HHCCEEEeCccccCC--CCeEEEEec-CCHHHHHHHHHH
Confidence 888899999999999999999742 1 23566655 467999999998864 679999998 699999999999
Q ss_pred HHHHHHHhh
Q 011570 430 ITSFMLKNV 438 (483)
Q Consensus 430 L~~~l~~~~ 438 (483)
|++++++.+
T Consensus 389 l~~~l~~~~ 397 (398)
T 3ele_A 389 FEKIYKKYN 397 (398)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhh
Confidence 999998753
No 27
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=2.2e-45 Score=378.77 Aligned_cols=353 Identities=19% Similarity=0.254 Sum_probs=282.2
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
..++|+|+.++++++ ++.+.+++.+.... .........|++..|..+||+++++++. +| +.+++++|+
T Consensus 68 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~-------~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g--~~~~~~~i~ 136 (449)
T 3qgu_A 68 DAKIISLGIGDTTEPLPKYIADAMAKAAAG-------LATREGYSGYGAEQGQGALREAVASTFY--GH--AGRAADEIF 136 (449)
T ss_dssp TCCCEECSSCCCCCCCCHHHHHHHHHHHHG-------GGGSCCCCCSTTTTCCHHHHHHHHHHHH--TT--TTCCGGGEE
T ss_pred CCCEEEeeCCCCCCCCCHHHHHHHHHHHHh-------hccccCCCCCCCCCCcHHHHHHHHHHHH--cC--CCCCHHHEE
Confidence 346899999988775 44455544431100 0000234579888899999999999997 44 457889999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcE----------EEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQ----------LVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~----------~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
+|+|+++++..+ .+++++||.|++++|+|..+...++.. |.+ ++.+++++++++..|++.+
T Consensus 137 ~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 207 (449)
T 3qgu_A 137 ISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMM-GMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA------- 207 (449)
T ss_dssp EESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHH-TCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-------
T ss_pred EccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHc-CCcccccccccceeEEEecccccCCcCChhHc-------
Confidence 999999999999 888999999999999999999998886 988 9999998776777776432
Q ss_pred HhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEE
Q 011570 194 QESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIV 273 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~ 273 (483)
+++++|++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++ ....++..+.. ..++++++
T Consensus 208 ----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~-----~~~~~i~~ 277 (449)
T 3qgu_A 208 ----KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNP-DCPKTIYEIPG-----ADEVAIET 277 (449)
T ss_dssp ----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCT-TSCSSGGGSTT-----GGGTEEEE
T ss_pred ----CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCC-CCCCCHhhccC-----CCCcEEEE
Confidence 378999999999999999999999999999999999999999999987765 44455555432 24678999
Q ss_pred ecCccccCCCCceEEEEEecChHHH-------HHHHHh--hhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHH
Q 011570 274 YSLSKDMGFPGFRVGIIYSYNDQVV-------SCARKM--SSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHK 344 (483)
Q Consensus 274 ~S~SK~~g~~GlRiG~li~~~~~l~-------~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~ 344 (483)
.||||.+|++|+|+||++++++.+. ..+... ..++.+++++|.++.+++.+.. .+++++.+++++++++
T Consensus 278 ~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~ 355 (449)
T 3qgu_A 278 CSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEG--LKEMNAMIKFYKENAQ 355 (449)
T ss_dssp EECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHH--HHHHHHHHHHHHHHHH
T ss_pred ecchhhcCCccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHH
Confidence 9999999999999999999654332 122222 2234578899999998887633 3567888899999999
Q ss_pred HHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHH
Q 011570 345 AFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTME 424 (483)
Q Consensus 345 ~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~ 424 (483)
++.+.|++.|+++..+.+++|+|++++ ..+ ..+++..|++++||.+.||..|+..+++++||++. .++++++
T Consensus 356 ~l~~~L~~~g~~~~~~~~~~~~~~~~~-~~~------~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~-~~~e~i~ 427 (449)
T 3qgu_A 356 ILKTTFTEMGFSVYGGDDAPYIWVGFP-GKP------SWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAF-GSRENIL 427 (449)
T ss_dssp HHHHHHHHTTCCEEESSSSSEEEEECT-TSC------HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC-SCHHHHH
T ss_pred HHHHHHHHCCCeeeCCCCeeEEEEECC-CCC------HHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEec-CCHHHHH
Confidence 999999999999999988999999997 222 33788888988899999999998767889999986 4999999
Q ss_pred HHHHHHHHHHHHh
Q 011570 425 IALSRITSFMLKN 437 (483)
Q Consensus 425 ~~l~~L~~~l~~~ 437 (483)
+++++|++++++.
T Consensus 428 ~~l~~l~~~~~~~ 440 (449)
T 3qgu_A 428 EAVRRFKEAYGKR 440 (449)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988654
No 28
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=2.1e-45 Score=369.63 Aligned_cols=349 Identities=18% Similarity=0.254 Sum_probs=287.4
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
+.++|||+.++++++ ++.+.+++.+... .....|++ .| .++|+++++++++.+| +++++++|+
T Consensus 22 g~~~idl~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~-~~-~~lr~~la~~~~~~~~--~~~~~~~i~ 85 (377)
T 3fdb_A 22 GQGVLPLWVAESDFSTCPAVLQAITDAVQ------------REAFGYQP-DG-SLLSQATAEFYADRYG--YQARPEWIF 85 (377)
T ss_dssp CTTSEECCSSCCCSCCCHHHHHHHHHHHH------------TTCCSSCC-SS-CCHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCCeeeecccCCCCCCCHHHHHHHHHHHH------------cCCCCCCC-CC-HHHHHHHHHHHHHHhC--CCCCHHHEE
Confidence 457899999998875 4555555543110 12457888 77 9999999999998887 557889999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.+++++||+|+++.|+|..+...++.. |.+++.+|++++ +|++.|++++++ ++++|
T Consensus 86 ~t~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~----~d~~~l~~~l~~------~~~~v 154 (377)
T 3fdb_A 86 PIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSAT-QREGIFIDATGG----INLHDVEKGFQA------GARSI 154 (377)
T ss_dssp EESCHHHHHHHHHHHHSCTTCCEEEEESCCTHHHHHHHHH-TCCEEEEECTTS----CCHHHHHHHHHT------TCCEE
T ss_pred EeCChHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHc-CCEEEEccCCCC----CCHHHHHHHhcc------CCCEE
Confidence 9999999999999999999999999999999999988886 999999998753 899999999875 67899
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+.+...+.++..+.. .+++++++||||.+|++
T Consensus 155 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~------~~~~i~~~s~sK~~g~~ 228 (377)
T 3fdb_A 155 LLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTA------ASVCITITAPSKAWNIA 228 (377)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHH------HHHEEEEECSTTTTTCG
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccC------CCcEEEEEeChHhccCc
Confidence 999999999999999999999999999999999999999876653112334433321 36789999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC--Cceeec
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV--GIGCLK 359 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--gi~~~~ 359 (483)
|+|+||+++.++.+.+.+...... +.+++++|.++.+++... .+++++.++.++++++++.+.|++. |+++..
T Consensus 229 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 305 (377)
T 3fdb_A 229 GLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYG---TDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITP 305 (377)
T ss_dssp GGCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECC
T ss_pred chhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhhCCCceEec
Confidence 999999998677777776654432 558889998888877642 3457788889999999999999885 899999
Q ss_pred CCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 360 SNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 360 ~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
+.+++++|++++..... .+++..+++++||.++||+.|+...++++||+++ .+++++++++++|++++++
T Consensus 306 ~~~~~~~~~~~~~~~~~------~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~-~~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 306 MQATYLMWIDFRDTTIE------GSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFA-TSREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp CSBCSEEEEECTTSCCC------SCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC-SCHHHHHHHHHHHHHHHTT
T ss_pred CCeeEEEEEECcccCCC------HHHHHHHHHhCCEEecCChhccCCCCCEEEEEeC-CCHHHHHHHHHHHHHHHhh
Confidence 99999999999863111 1567778877899999999998666789999998 4899999999999998864
No 29
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=4.5e-45 Score=367.88 Aligned_cols=352 Identities=17% Similarity=0.249 Sum_probs=289.1
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|+|+.++++++ ++.+.+++.+... .....|++. ..++++++++++.+.+| .++++++|++
T Consensus 24 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~--~~~~~~~l~~~l~~~~g--~~~~~~~v~~ 87 (383)
T 3kax_A 24 EELIHAWIADMDFEVPQPIQTALKKRIE------------HPIFGYTLP--PENIGDIICNWTKKQYN--WDIQKEWIVF 87 (383)
T ss_dssp SCCEECCCSSCSSCCCHHHHHHHHHHHH------------SCCCCCCCC--CTTHHHHHHHHHHHHHC--CCCCGGGEEE
T ss_pred CCeeecccccCCCCCCHHHHHHHHHHHh------------cCCCCCCCC--CHHHHHHHHHHHHHHhC--CCCChhhEEE
Confidence 47899999998875 4555555543110 123467655 68999999999998877 4568899999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCC-CCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSS-NDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
|+|+++++..++.+++++||+|+++.|+|..+...++.. |.+++.++++.+ ++|.+|++.|++++. +++++|
T Consensus 88 ~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~l~~~l~------~~~~~v 160 (383)
T 3kax_A 88 SAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEMVTTN-NRQLCVSPLQKQNDTYAIDFEHLEKQFQ------QGVKLM 160 (383)
T ss_dssp ESCHHHHHHHHHHHHCCTTCEEEECSSCCHHHHHHHHHT-TCEEEECCCEEETTEEECCHHHHHHHHT------TTCCEE
T ss_pred cCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHc-CCEEEeccceecCCcEEEcHHHHHHHhC------cCCeEE
Confidence 999999999999999999999999999999999988876 999999998743 358899999999984 378999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+.+ ..+.++..+..+ ..+++++++||||.+|++
T Consensus 161 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~----~~~~~i~~~s~sK~~~~~ 235 (383)
T 3kax_A 161 LLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYAD-HTHTPFASLSEE----LAARTITCMAPSKTFNIA 235 (383)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT-CCCCCGGGSCHH----HHTTEEEEECSHHHHTCG
T ss_pred EEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCC-CCceeHhhcCcc----ccCcEEEEEEChhhccCc
Confidence 999999999999999999999999999999999999999887766 444555554321 137889999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhh---cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC--Cceee
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSS---FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV--GIGCL 358 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--gi~~~ 358 (483)
|+|+||++++++.+.+.+..... ++.++++++.++..++... .+++++.+++++++++++.+.|++. |+++.
T Consensus 236 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 312 (383)
T 3kax_A 236 GLQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTEC---NDWLNEIRFYIEDNAKFACEYIKDHIPTLSVM 312 (383)
T ss_dssp GGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTC---HHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEC
T ss_pred chhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHHhhCCCceEe
Confidence 99999999966777766655432 2357889999988888763 3457778888899999999999884 89999
Q ss_pred cCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 359 KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 359 ~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
.+.+++++|++++.... +..+++..|++++||.++||+.|+..+++++||+++ .+++++++++++|++++
T Consensus 313 ~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~-~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 313 KPEGSFLLWIDCSALNL-----SQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIG-CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp CCSBSSEEEEECGGGCC-----CHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECS-SCHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEEEccccCC-----CHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEc-CCHHHHHHHHHHHHHHh
Confidence 99999999999975210 133778888877899999999998777789999998 58999999999999875
No 30
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.8e-44 Score=369.31 Aligned_cols=363 Identities=18% Similarity=0.275 Sum_probs=287.4
Q ss_pred CCcccccchhhhh---cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCC-cCCCc
Q 011570 46 NGVIQMGLAENLL---CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRIT-FDPDR 121 (483)
Q Consensus 46 ~~~i~l~~~~n~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~-~~~~~ 121 (483)
.++|||+.+.+.. +++.+.+++.+.... .......|++..|..+||+++|+++.+.+| ++ +++++
T Consensus 43 ~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~---------~~~~~~~y~~~~g~~~lr~~la~~l~~~~g--~~~~~~~~ 111 (425)
T 1vp4_A 43 KDAISFGGGVPDPETFPRKELAEIAKEIIEK---------EYHYTLQYSTTEGDPVLKQQILKLLERMYG--ITGLDEDN 111 (425)
T ss_dssp TTCEECCCCSCCGGGSCHHHHHHHHHHHHHH---------SHHHHTSCCCTTCCHHHHHHHHHHHHHHHC--CCSCCGGG
T ss_pred CCceeCCCCCCCcccCCHHHHHHHHHHHHhh---------cchhhcCCCCCCCCHHHHHHHHHHHHhccC--CCCCCccc
Confidence 3678998875432 445555555431000 001235788888999999999999976656 44 57889
Q ss_pred EEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc--CCc
Q 011570 122 IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES--NIR 199 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~--~~~ 199 (483)
|++|+|+++++..++.+++++||+|+++.|+|..+...++.. |.+++.+|++++ .+|++.|++++++...+ +.+
T Consensus 112 v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~ 187 (425)
T 1vp4_A 112 LIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQY-LANFVVVPLEDD---GMDLNVLERKLSEFDKNGKIKQ 187 (425)
T ss_dssp EEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTT-TCEEEEEEEETT---EECHHHHHHHHHHHHHTTCGGG
T ss_pred EEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHc-CCEEEEeccCCC---CCCHHHHHHHHHhhhhcccCCC
Confidence 999999999999999999999999999999999999988875 999999998754 38999999998753221 236
Q ss_pred eeEE-EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCcc
Q 011570 200 IKGV-LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSK 278 (483)
Q Consensus 200 ~~~i-~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK 278 (483)
+++| ++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++ ..+.++..+. ..+++++++||||
T Consensus 188 ~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~------~~~~~i~~~s~sK 260 (425)
T 1vp4_A 188 VKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEG-ETVDPIFKIG------GPERVVLLNTFSK 260 (425)
T ss_dssp EEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSS-CCCCCHHHHH------CTTTEEEEEESTT
T ss_pred ceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCC-CCCcCHHHhC------CCCCEEEEecccc
Confidence 8888 578999999999999999999999999999999999999987765 4445666653 2467899999999
Q ss_pred ccCCCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC---
Q 011570 279 DMGFPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV--- 353 (483)
Q Consensus 279 ~~g~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--- 353 (483)
.+| +|+|+||++++ +.+.+.+...... +.+++++|.++..++.... ..+++++.++.++++++++.+.|++.
T Consensus 261 ~~~-~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 337 (425)
T 1vp4_A 261 VLA-PGLRIGMVAGS-KEFIRKIVQAKQSADLCSPAITHRLAARYLERYD-LLEQLKPTIELYRRKRTVMLNALEEYFSD 337 (425)
T ss_dssp TTC-GGGCEEEEECC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSC-HHHHTHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred ccc-cccceEEEeeC-HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999 99999999995 6666655443322 4578899999988887542 25667888889999999999999875
Q ss_pred --CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC--CCCEEEEEeccCCHHHHHHHHHH
Q 011570 354 --GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP--NPGWFRVCFANMDDRTMEIALSR 429 (483)
Q Consensus 354 --gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~--~~~~iRis~~~~~~e~l~~~l~~ 429 (483)
|+.+..+.+|+|+|++++...+. .++++.|+++ ||.+.||..|+.. .++++||+++..+++++++++++
T Consensus 338 ~~g~~~~~~~~g~~~~~~~~~~~~~------~~l~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~ 410 (425)
T 1vp4_A 338 IPGVKWVKSEGGLFIWLTLPEGFDT------WEMFEYAKRK-KVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKR 410 (425)
T ss_dssp STTCEECCCSBSSEEEEECCTTCCT------TTTHHHHHHH-TEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHH
T ss_pred CCceEEecCCccEEEEEEcCCCCCH------HHHHHHHHHC-CCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHH
Confidence 68888788899999999853322 2567777766 9999999988643 45799999986589999999999
Q ss_pred HHHHHHHhhhc
Q 011570 430 ITSFMLKNVEA 440 (483)
Q Consensus 430 L~~~l~~~~~~ 440 (483)
|++++++..++
T Consensus 411 l~~~l~~~~~~ 421 (425)
T 1vp4_A 411 LREVVLEYGKE 421 (425)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999877654
No 31
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.1e-44 Score=366.58 Aligned_cols=344 Identities=26% Similarity=0.429 Sum_probs=281.5
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|+|+.++++++ ++.+.+++.+... .....|++..|..+||+++|+++.+.+| +++++++|++
T Consensus 41 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~lr~~la~~~~~~~g--~~~~~~~v~~ 106 (389)
T 1o4s_A 41 EDVINLTAGEPDFPTPEPVVEEAVRFLQ------------KGEVKYTDPRGIYELREGIAKRIGERYK--KDISPDQVVV 106 (389)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHT------------TCCCCCCCTTCCHHHHHHHHHHHHHHHT--CCCCGGGEEE
T ss_pred CCEEEccCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCHHHEEE
Confidence 46789999988764 4445555443110 0124688878899999999999987776 4467899999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++.+++++||+|+++.|+|+.+...++.. |.+++.++++++++|.+|+++|++++++ ++++|+
T Consensus 107 ~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~ 179 (389)
T 1o4s_A 107 TNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILA-GGTVNVVETFMSKNFQPSLEEVEGLLVG------KTKAVL 179 (389)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECCGGGTTCCCHHHHHHTCCT------TEEEEE
T ss_pred ecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHc-CCEEEEEecCCccCCCCCHHHHHHhccc------CceEEE
Confidence 999999999999999999999999999999999988875 9999999987655788999999998753 689999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
+++|+||||.+++.+++++|+++|+++|++||+||+|.++.+.+ .+.++..+.. ..+++++++||||.+|++|
T Consensus 180 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g--~~~~~~~~~~-----~~~~~i~~~s~sK~~~~~G 252 (389)
T 1o4s_A 180 INSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD--EFTSILDVSE-----GFDRIVYINGFSKSHSMTG 252 (389)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS--CCCCHHHHCS-----SSTTEEEEEESTTTTTCGG
T ss_pred EcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC--CCCCHhhcCC-----CCCcEEEEeechhhcCCcc
Confidence 99999999999999999999999999999999999999876654 2345655521 2478999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCc
Q 011570 285 FRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNA 362 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~ 362 (483)
+|+||+++ ++.+.+.+..... .+.+++++|.++..++... +++.++.++++++++.+.|+++|+++..+.+
T Consensus 253 ~r~G~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 325 (389)
T 1o4s_A 253 WRVGYLIS-SEKVATAVSKIQSHTTSCINTVAQYAALKALEVD------NSYMVQTFKERKNFVVERLKKMGVKFVEPEG 325 (389)
T ss_dssp GCCEEEEC-CHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC------CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSB
T ss_pred cceEEEEe-CHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHhcCCeeecCCc
Confidence 99999999 5566665554432 2457888999888888764 3556677888889999999888988888889
Q ss_pred eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 363 GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 363 g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
|+|+|++++ .+ ..++++.|++++||.+.||..|+. ++++||+++. +++++++++++|+++++
T Consensus 326 ~~~~~~~~~--~~------~~~l~~~l~~~~gi~v~~g~~f~~--~~~~Ris~~~-~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 326 AFYLFFKVR--GD------DVKFCERLLEEKKVALVPGSAFLK--PGFVRLSFAT-SIERLTEALDRIEDFLN 387 (389)
T ss_dssp SSEEEEECS--SC------HHHHHHHHHHHHCEECEEGGGGTC--TTEEEEECCS-CHHHHHHHHHHHHHHHT
T ss_pred ceEEEEeCC--CC------HHHHHHHHHHHCCEEEeCchhcCC--CCeEEEEEeC-CHHHHHHHHHHHHHHHh
Confidence 999999987 11 236788888667999999998864 5699999984 89999999999998874
No 32
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=7.4e-45 Score=369.45 Aligned_cols=358 Identities=17% Similarity=0.300 Sum_probs=287.2
Q ss_pred CCCcccccchh-hhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC-Cc
Q 011570 45 PNGVIQMGLAE-NLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP-DR 121 (483)
Q Consensus 45 ~~~~i~l~~~~-n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~-~~ 121 (483)
+..+|||+.+. ++++ ++.+.+++.+... . .....|++..|..++++++++++.+.+| .++++ ++
T Consensus 38 ~~~~id~~~g~~~~~~~~~~v~~a~~~~~~----------~-~~~~~y~~~~g~~~l~~~l~~~l~~~~g--~~~~~~~~ 104 (407)
T 3nra_A 38 EGRPVDFSHGDVDAHEPTPGAFDLFSAGVQ----------S-GGVQAYTEYRGDLGIRDLLAPRLAAFTG--APVDARDG 104 (407)
T ss_dssp CSCCEETTSCCTTTSCCCTTHHHHHHHHHH----------H-THHHHSCCTTCCHHHHHHHHHHHHHHHT--SCCCTTTS
T ss_pred CCceeeecCcCCCCCCCcHHHHHHHHHHHh----------c-CCCCCcCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCc
Confidence 34589999864 3343 3445554443100 0 1134688888999999999999998887 44556 79
Q ss_pred EEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC----CCCcccCHHHHHHHHHHHHhcC
Q 011570 122 IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS----SNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~----~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
|++|+|+++++..++.+++++||+|+++.|+|..+...++.. |.+++.++++. +.++.+|++.|++++.+
T Consensus 105 i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~----- 178 (407)
T 3nra_A 105 LIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFF-EGEMVPVQLDYVSADETRAGLDLTGLEEAFKA----- 178 (407)
T ss_dssp EEEESHHHHHHHHHHHTTCCTTCEEEEEESCCTHHHHHHHHT-TCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-----
T ss_pred EEEeCCcHHHHHHHHHHhCCCCCEEEEcCCcccchHHHHHHc-CCEEEEeecccccccCcCCCcCHHHHHHHHhh-----
Confidence 999999999999999999999999999999999999988886 99999999842 35678999999999874
Q ss_pred CceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhh-hhccccCCCeEEEEecC
Q 011570 198 IRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEII-DQDIACNRNLIHIVYSL 276 (483)
Q Consensus 198 ~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~-~~~~~~~~~~vi~~~S~ 276 (483)
++++|++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++ ..+.++..+. . ..+++++++||
T Consensus 179 -~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g-~~~~~~~~~~~~-----~~~~~i~~~s~ 251 (407)
T 3nra_A 179 -GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAG-ASYTHLRAEAAV-----DAENVVTIMGP 251 (407)
T ss_dssp -TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTT-CCCCCGGGCTTS-----CGGGEEEEECS
T ss_pred -CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCCChhhcCcc-----cCCcEEEEeCc
Confidence 68899999999999999999999999999999999999999999987776 5555555543 1 35789999999
Q ss_pred ccccCCCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-
Q 011570 277 SKDMGFPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV- 353 (483)
Q Consensus 277 SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~- 353 (483)
||.+|++|+|+||+++ ++.+.+.+...... ...+++.|.++..++.... .++++.+++++++++++.+.|+++
T Consensus 252 sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~ 327 (407)
T 3nra_A 252 SKTESLSGYRLGVAFG-SRAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEAP---GWMEDRIARHQAIRDELLHVLRGCE 327 (407)
T ss_dssp SSTTCCGGGCCEEEEE-CHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCT---THHHHHHHHHHHHHHHHHHHHHTST
T ss_pred ccccCCCeeeEEEEEc-CHHHHHHHHHHHhhhccCCChHHHHHHHHHHhccc---hHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999 56666665543322 3456788888888887531 235666777888899999999988
Q ss_pred CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 354 GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 354 gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
|+.+..+.+++|+|++++.... ...++...|++++||.++||..|+...++++||+++. +++++++++++|+++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~ 401 (407)
T 3nra_A 328 GVFARTPQAGSYLFPRLPKLAV-----APAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ-DHEAAVAAARRIVTL 401 (407)
T ss_dssp TCBCCCCSBSSEECCBCCCBSS-----CHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS-CHHHHHHHHHHHHHH
T ss_pred CceeccCCeeEEEEEeCCCCCC-----CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC-CHHHHHHHHHHHHHH
Confidence 8998888989999999975211 1336788888778999999999987678899999985 999999999999999
Q ss_pred HHHhh
Q 011570 434 MLKNV 438 (483)
Q Consensus 434 l~~~~ 438 (483)
+++.+
T Consensus 402 ~~~~~ 406 (407)
T 3nra_A 402 VERYR 406 (407)
T ss_dssp HHHHB
T ss_pred HHHhh
Confidence 88753
No 33
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=1e-44 Score=368.81 Aligned_cols=354 Identities=22% Similarity=0.399 Sum_probs=284.9
Q ss_pred CCcccccchhh---hhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCc
Q 011570 46 NGVIQMGLAEN---LLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDR 121 (483)
Q Consensus 46 ~~~i~l~~~~n---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~ 121 (483)
.++|+|+.+++ .++ ++.+.+++.+... .....|++..|..++|+++|++++..+| +++++++
T Consensus 38 ~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~l~~~la~~l~~~~g--~~~~~~~ 103 (406)
T 1xi9_A 38 IKVIRLNIGDPVKFDFQPPEHMKEAYCKAIK------------EGHNYYGDSEGLPELRKAIVEREKRKNG--VDITPDD 103 (406)
T ss_dssp CCCEECCCCCGGGTTCCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHHHC--CCCCGGG
T ss_pred CCEEEecCCCCCcCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHhcC--CCCCHHH
Confidence 46789999988 443 3444444433100 0123688888899999999999998776 4577899
Q ss_pred EEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCcee
Q 011570 122 IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIK 201 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 201 (483)
|++|+|+++++..++.+++++||+|+++.|+|+.+...++.. |.+++.++++++++|.+|++.|++++++ +++
T Consensus 104 v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~ 176 (406)
T 1xi9_A 104 VRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFY-GGKPVEYRTIEEEDWQPDIDDIRKKITD------RTK 176 (406)
T ss_dssp EEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHT-TCEEEEEEEEGGGTSEECHHHHHHHCCT------TEE
T ss_pred EEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHc-CCEEEEeecCCCcCCcCCHHHHHHhhCc------Cce
Confidence 999999999999999999999999999999999999888875 9999999987645788999999998853 689
Q ss_pred EEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCe-EEEEecCcccc
Q 011570 202 GVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNL-IHIVYSLSKDM 280 (483)
Q Consensus 202 ~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~-vi~~~S~SK~~ 280 (483)
+|++++|+||||.+++.+++++|+++|+++|++||+||+|.++.++ ..+.++..+ ..++ +++++||||.+
T Consensus 177 ~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~--~~~~~~~~~-------~~~~~~i~~~s~sK~~ 247 (406)
T 1xi9_A 177 AIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYE--GEHISPGSL-------TKDVPVIVMNGLSKVY 247 (406)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSS--SCCCCHHHH-------CSSSCEEEEEESTTTT
T ss_pred EEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccC--CCCCCHHHc-------CCCceEEEEecccccc
Confidence 9999999999999999999999999999999999999999987774 333455555 1367 89999999999
Q ss_pred CCCCceEEEEE--ecCh---HHHHHHHHhhhc-CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-
Q 011570 281 GFPGFRVGIIY--SYND---QVVSCARKMSSF-GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV- 353 (483)
Q Consensus 281 g~~GlRiG~li--~~~~---~l~~~~~~~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~- 353 (483)
|++|+|+||++ ++++ .+.+.+...... +.+++++|.++.+++.... +++++.++.++++++++.+.|.++
T Consensus 248 ~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~ 324 (406)
T 1xi9_A 248 FATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPM---DYLKEYMKKLKERRDYIYKRLNEIP 324 (406)
T ss_dssp CCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSCC---HHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred CCCccEEEEEEEecCchhHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhCCc---HHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999 7541 566655544332 5678899999888884321 236777788899999999999988
Q ss_pred CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 354 GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 354 gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
|+++..+.+|+|+|++++.... .+..+++..|++++||.+.||..|+..+++++||+++ .+++++++++++|+++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~-~~~~~i~~~~~~l~~~ 399 (406)
T 1xi9_A 325 GISTTKPQGAFYIFPKIEVGPW----KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL-PPIEILEEAMDRFEKF 399 (406)
T ss_dssp TEECCCCCBSSEECCEECSCSC----SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC-SCHHHHHHHHHHHHHH
T ss_pred CCeeecCCeeEEEEEecCccCC----CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec-CCHHHHHHHHHHHHHH
Confidence 8888888899999998874110 0133678888867799999999887545679999998 7999999999999999
Q ss_pred HHHh
Q 011570 434 MLKN 437 (483)
Q Consensus 434 l~~~ 437 (483)
+++.
T Consensus 400 l~~~ 403 (406)
T 1xi9_A 400 MKER 403 (406)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 8765
No 34
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=1.6e-44 Score=370.16 Aligned_cols=355 Identities=16% Similarity=0.170 Sum_probs=284.1
Q ss_pred CCcccccchhh-hhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCc--
Q 011570 46 NGVIQMGLAEN-LLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDR-- 121 (483)
Q Consensus 46 ~~~i~l~~~~n-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~-- 121 (483)
.++|||+.+++ +++ ++.+ .++...... +.. .....|++..|..+||+++|+++.+.. +.+++++
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~-~~~~a~~~~-------~~~-~~~~~y~~~~g~~~lr~~ia~~~~~~~---~~~~~~~~~ 114 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFA-SSLDAMFND-------LTP-DEIFPYAPPQGIEELRDLWQQKMLRDN---PELSIDNMS 114 (430)
T ss_dssp TCSEECCCSSCEETTEECCC-HHHHTTBSS-------CCG-GGTSSCCCTTCCHHHHHHHHHHHHHHC---TTCCGGGBC
T ss_pred CCcEEeeeeeccCCCCchhh-HHHHHHHHh-------cCc-ccccccCCCCCCHHHHHHHHHHHhccC---cccCCCccc
Confidence 46799999988 654 2222 122221111 000 135689988899999999999997652 3467888
Q ss_pred -EEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhh-hcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 122 -IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRW-RTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 122 -i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
|++|+|+++++..++.+++++||+|+++.|+|+.+...++. . |.+++.+++++++ |.+|++.|++++.+. +.+
T Consensus 115 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~-g~~~~~~~~~~~~-~~~d~~~l~~~l~~~---~~~ 189 (430)
T 2x5f_A 115 RPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRN-GANLQTYPIFDKD-GHYTTDSLVEALQSY---NKD 189 (430)
T ss_dssp CCEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTT-CCEEEEECCBCTT-SCBCSHHHHHHHHHC---CSS
T ss_pred eEEEcCCchHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhc-CCeEEEEeccCcc-CCcCHHHHHHHHHhc---CCC
Confidence 99999999999999999999999999999999999988887 6 9999999987643 789999999998742 236
Q ss_pred eeEEEEeCCCCCCcCCCCHHHHHHHHHHHhh-----cCcEEEEccccccCccCCCCCcchHH-HhhhhccccCCCe---E
Q 011570 200 IKGVLITNPSNPLGTFLDRETLKDIVSFINE-----KNIHLVCDEIYAATVFTKESSFVSIA-EIIDQDIACNRNL---I 270 (483)
Q Consensus 200 ~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~-----~~~~iI~Deay~~~~~~~~~~~~s~~-~l~~~~~~~~~~~---v 270 (483)
+++|++++||||||.+++.+++++|+++|++ +|++||+||+|.++.+++ ..+.++. .+.. ..++ +
T Consensus 190 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~ 263 (430)
T 2x5f_A 190 KVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYED-VYTQSLFTALTN-----LHSNAILP 263 (430)
T ss_dssp EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSS-SCCSCHHHHHHT-----TCCTTEEE
T ss_pred CEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCc-ccchHHHHHHhh-----ccCCcceE
Confidence 8999999999999999999999999999999 999999999999887765 4445655 5532 2467 8
Q ss_pred EEEecCccccCCCCceEEEEEe--cChHHHHHHHHhh------hcCCCChHHHHHHHHhcC-ChhHHHHHHHHHHHHHHH
Q 011570 271 HIVYSLSKDMGFPGFRVGIIYS--YNDQVVSCARKMS------SFGLVSSQTQHLIATMLS-DDQFVEKFIAESAKRIAE 341 (483)
Q Consensus 271 i~~~S~SK~~g~~GlRiG~li~--~~~~l~~~~~~~~------~~~~~s~~~q~~~~~~l~-~~~~~~~~~~~~~~~l~~ 341 (483)
++++||||.+|++|+|+||+++ +++.+.+.+.... ..+.+++++|.++..++. +..+ .+.+++.++.+++
T Consensus 264 i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~ 342 (430)
T 2x5f_A 264 IRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQF-DKEIEQNIQTLKE 342 (430)
T ss_dssp EEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHH-HHHHHHHHHHHHH
T ss_pred EEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHH-HHHHHHHHHHHHH
Confidence 9999999999999999999999 3455555554433 235588999999999998 7655 3445668889999
Q ss_pred HHHHHHHhhh----cCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc
Q 011570 342 RHKAFTWGLS----QVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN 417 (483)
Q Consensus 342 ~~~~l~~~L~----~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~ 417 (483)
+++++.+.|+ +.|+++.++.+|+|+|++++ ..+ ..+++..|++++||.+.|| .++++||+++.
T Consensus 343 ~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~-~~~------~~~~~~~l~~~~gi~v~~g------~~~~iRis~~~ 409 (430)
T 2x5f_A 343 RYEVTKEVVYADQYHSHWQAYDFNSGYFMAIKVH-DVD------PEALRKHLIDKYSIGVIAL------NATDIRIAFSC 409 (430)
T ss_dssp HHHHHHHHHTCGGGTTTEEECCCCBSSEEEEEES-SSC------HHHHHHHHHHHHCEECEEC------SSSEEEEEGGG
T ss_pred HHHHHHHHHHhhCCCCCceeeCCCceEEEEeCCC-CCC------HHHHHHHHHHhCCEEEecC------CCCeEEEEEec
Confidence 9999999998 66898888999999999997 221 2377888887579999998 35799999985
Q ss_pred CCHHHHHHHHHHHHHHHHHh
Q 011570 418 MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 418 ~~~e~l~~~l~~L~~~l~~~ 437 (483)
.+++++++++++|++++++.
T Consensus 410 ~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 410 VEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp SCGGGHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 68999999999999998764
No 35
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.2e-45 Score=372.31 Aligned_cols=355 Identities=20% Similarity=0.327 Sum_probs=284.0
Q ss_pred Ccccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC-cEEE
Q 011570 47 GVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD-RIVM 124 (483)
Q Consensus 47 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~i 124 (483)
++|+|+.+++.++ ++.+.+++.+... .....|++..|..+||+++|+++.+.+| ++++++ +|++
T Consensus 26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~l~~~la~~~~~~~g--~~~~~~~~v~~ 91 (411)
T 2o0r_A 26 GAVNLGQGFPDEDGPPKMLQAAQDAIA------------GGVNQYPPGPGSAPLRRAIAAQRRRHFG--VDYDPETEVLV 91 (411)
T ss_dssp TCEESSCSSCSSCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHHHC--CCCCTTTSEEE
T ss_pred CeeeccCcCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHcC--CCCCCCceEEE
Confidence 5789999987754 4455555543100 0135788888899999999999988777 446788 9999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCC-CCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSS-NDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
|+|+++++..++.+++++||+|+++.|+|+.+...+... |.+++.++++++ .+|.+|++.|++++.+ ++++|
T Consensus 92 t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~d~~~l~~~l~~------~~~~v 164 (411)
T 2o0r_A 92 TVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMA-GAHRVTVPLVPDGRGFALDADALRRAVTP------RTRAL 164 (411)
T ss_dssp EEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECEEETTEEECCHHHHHHHCCT------TEEEE
T ss_pred eCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHc-CCEEEEeeccccccCCCCCHHHHHHhhcc------CceEE
Confidence 999999999999999999999999999999999888875 999999998653 3578999999998853 78999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++|+||||.+++.+++++|+++|+++|++||+||+|.++.+++ ..+.++..+.. ..++++++.|+||.+|++
T Consensus 165 ~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~-----~~~~~i~~~s~sK~~~~~ 238 (411)
T 2o0r_A 165 IINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDH-ARHLPLAGFDG-----MAERTITISSAAKMFNCT 238 (411)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTT-CCCCCGGGSTT-----TGGGEEEEEEHHHHTTCT
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCcChhhccC-----CCCCEEEEeechhhcCCc
Confidence 999999999999999999999999999999999999999887765 44445544421 236789999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
|+|+||+++ ++.+.+.+..... .+..++++|.++..++... .+++++.+++++++++++.+.|++.|+++..+.
T Consensus 239 G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 314 (411)
T 2o0r_A 239 GWKIGWACG-PAELIAGVRAAKQYLSYVGGAPFQPAVALALDTE---DAWVAALRNSLRARRDRLAAGLTEIGFAVHDSY 314 (411)
T ss_dssp TTCEEEEEC-CHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHTCEECCCC
T ss_pred cceEEEEee-CHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHHcCCEecCCC
Confidence 999999999 5666666554332 2456778888888877532 445778888899999999999988899988888
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC-----------CCCEEEEEeccCCHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP-----------NPGWFRVCFANMDDRTMEIALSRI 430 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~-----------~~~~iRis~~~~~~e~l~~~l~~L 430 (483)
+|+|+|++++... . .+..+++..|++++||.+.||..|... .++++||+++ .+++++++++++|
T Consensus 315 ~g~~~~~~~~~~~-~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~-~~~e~i~~~~~~l 389 (411)
T 2o0r_A 315 GTYFLCADPRPLG-Y---DDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC-KRDDTLDEAIRRL 389 (411)
T ss_dssp BSSEEEEECGGGT-C---CCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC-SCHHHHHHHHHHH
T ss_pred eeEEEEEecCCCC-C---CCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec-CCHHHHHHHHHHH
Confidence 9999999997521 0 012367888887789999999888432 3578999998 4899999999999
Q ss_pred HHHHHHh
Q 011570 431 TSFMLKN 437 (483)
Q Consensus 431 ~~~l~~~ 437 (483)
++++++.
T Consensus 390 ~~~~~~~ 396 (411)
T 2o0r_A 390 SVLAERP 396 (411)
T ss_dssp GGGGC--
T ss_pred HHHHhcc
Confidence 8876543
No 36
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=9.5e-45 Score=366.95 Aligned_cols=352 Identities=14% Similarity=0.227 Sum_probs=281.5
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHH-HHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPE-FRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~-Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
.++|+|+.+++.++ ++.+.+++.+... .....|++. ..+ ||+++|+++++.+| +++++++|+
T Consensus 28 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~--~~~~lr~~la~~l~~~~g--~~~~~~~v~ 91 (390)
T 1d2f_A 28 ADLLPFTISDMDFATAPCIIEALNQRLM------------HGVFGYSRW--KNDEFLAAIAHWFSTQHY--TAIDSQTVV 91 (390)
T ss_dssp --CEECCSSSCSSCCCHHHHHHHHHHHT------------TCCCCCCCS--CCHHHHHHHHHHHHHHSC--CCCCGGGEE
T ss_pred CCeeEeeecCCCCCCCHHHHHHHHHHHh------------CCCCCCCCC--ChHHHHHHHHHHHHHhcC--CCCCHHHEE
Confidence 57899999988764 4556665544111 123467764 688 99999999988766 456789999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCC-CCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSS-NDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
+|+|+++++..++.+++++||+|+++.|+|+.+...++.. |.+++.+|++.+ ++|.+|++.|++++++ .++++
T Consensus 92 ~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-----~~~~~ 165 (390)
T 1d2f_A 92 YGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGN-QRTVMPVALEKQADGWFCDMGKLEAVLAK-----PECKI 165 (390)
T ss_dssp EESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHHHHT-TCEEEEEECEECSSSEECCHHHHHHHHTS-----TTEEE
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHC-CCEEEEeecccCCCccccCHHHHHHHhcc-----CCCeE
Confidence 9999999999999999999999999999999999988876 999999998754 3678999999998853 26899
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
|++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++ ..+.++..+.. .. ..+ +.||||.+|+
T Consensus 166 v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~-----~~-~d~-~~s~sK~~~~ 237 (390)
T 1d2f_A 166 MLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGE-QPHIPWSNVAR-----GD-WAL-LTSGSKSFNI 237 (390)
T ss_dssp EEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSS-SCCCCGGGTCC-----SS-EEE-EECSHHHHTC
T ss_pred EEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCcCHHHcch-----hh-Hhh-ccCccHhhcc
Confidence 9999999999999999999999999999999999999999887765 44455554422 11 123 8999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhhh----cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc-C-Cce
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSS----FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ-V-GIG 356 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~----~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~-gi~ 356 (483)
+|+|+||++++++.+.+.+..... ++.+++++|.++.+++... .+++++.++.++++++++.+.|++ + |+.
T Consensus 238 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 314 (390)
T 1d2f_A 238 PALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQG---APWLDALRIYLKDNLTYIADKMNAAFPELN 314 (390)
T ss_dssp GGGCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCSSCC
T ss_pred cChhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHhhCCCCE
Confidence 999999999966667666554433 3467888888887777532 345777888899999999999988 5 888
Q ss_pred eecCCceEEEeeecCch-hhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 357 CLKSNAGLFLWMDLHHL-LKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 357 ~~~~~~g~f~~~~l~~~-~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
+.++.+++++|++++.. .+ ..+++..|++++||.+.||..|+...++++||+++. +++++++++++|+++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~ 387 (390)
T 1d2f_A 315 WQIPQSTYLAWLDLRPLNID------DNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-PRSKLEKGVAGLINAIR 387 (390)
T ss_dssp CCCCSBCSEEEEECGGGCCC------HHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHH
T ss_pred EecCCccEEEEEEccccCCC------HHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 88889999999999753 11 236788888678999999998865456899999985 78999999999999887
Q ss_pred Hh
Q 011570 436 KN 437 (483)
Q Consensus 436 ~~ 437 (483)
+.
T Consensus 388 ~~ 389 (390)
T 1d2f_A 388 AV 389 (390)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 37
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.3e-44 Score=360.68 Aligned_cols=332 Identities=16% Similarity=0.205 Sum_probs=276.4
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|+|+.++|+++ ++.+.+++.+. ......|++..+ .+||+++|++++ +++++|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~-------------~~~~~~y~~~~~-~~lr~~la~~~~--------~~~~~v~~ 87 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQN-------------ANKAHLYPDDSM-IELKSTLAQKYK--------VQNENIII 87 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHH-------------GGGTTSCCCTTC-HHHHHHHHHHHT--------CCGGGEEE
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHH-------------HHhhccCCCCCh-HHHHHHHHHHhC--------CCcceEEE
Confidence 57899999999986 45566655441 123467887766 999999999986 57899999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++.+++++||+|+++.|+|..+...++.. |.+++.+++ ++.++ +|++++++++++ ++++|+
T Consensus 88 ~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~v~~-~~~~~-~d~~~l~~~l~~------~~~~v~ 158 (365)
T 3get_A 88 GAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQC-GAKCYKTQS-ITHNL-DEFKKLYETHKD------EIKLIF 158 (365)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHHH-TCEEEECSS-SSCCH-HHHHHHHHHTTT------TEEEEE
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHHHHHHc-CCEEEEEec-CCCCC-CCHHHHHHHhCC------CCCEEE
Confidence 999999999999999999999999999999999988886 999999998 33467 999999998863 799999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCcc--CCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVF--TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~--~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
+++||||||.+++.+++.+|+++| ++|+++|+||+|.++.| .+ ..+.+...... ..+++++++||||.+|+
T Consensus 159 ~~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~i~~~s~sK~~~~ 231 (365)
T 3get_A 159 LCLPNNPLGECLDASEATEFIKGV-NEDCLVVIDAAYNEFASFKDS-KKHLEPCELIK-----EFDNVLYLGTFSKLYGL 231 (365)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCG-GGCCCHHHHHH-----HCTTEEEEEESSSTTSC
T ss_pred EcCCCCCCCCCcCHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCC-cccccHhHHhc-----cCCCEEEEeecchHhcC
Confidence 999999999999999999999998 57999999999998764 43 33344444433 35789999999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCc
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNA 362 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~ 362 (483)
+|+|+||+++ ++.+.+.+......+.+++++|.++..++.+.. ++++.+++++++++++.+.|+++|+++.++.+
T Consensus 232 ~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~ 306 (365)
T 3get_A 232 GGLRIGYGIA-NANIISAFYKLRAPFNVSNLALKAAVAAMDDDE----FTEKTLENNFSQMELYKEFAKKHNIKIIDSYT 306 (365)
T ss_dssp TTTCCEEEEE-CHHHHHHHHHHSCTTCSCHHHHHHHHHHHTCHH----HHHHHHHHHHHHHHHHHHHHHHTTCEECCCSS
T ss_pred cchheEEEEc-CHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHHhCCCEECCCCC
Confidence 9999999999 677777776666556689999999999998753 46778888999999999999999998877766
Q ss_pred eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 363 GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 363 g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
.|+|++++.. + ..++.+.|.+ +||.++||..|+ ++++||+++ +++++++++++|++++
T Consensus 307 -~~~~~~~~~~-~------~~~~~~~l~~-~gi~v~~g~~~~---~~~iRis~~--~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 307 -NFITYFFDEK-N------STDLSEKLLK-KGIIIRNLKSYG---LNAIRITIG--TSYENEKFFTEFDKIL 364 (365)
T ss_dssp -SEEEEECSSS-C------HHHHHHHHHT-TTEECEECGGGT---CSEEEEECC--CHHHHHHHHHHHHHHH
T ss_pred -eEEEEECCCC-C------HHHHHHHHHH-CCEEEEECccCC---CCEEEEEcC--CHHHHHHHHHHHHHHh
Confidence 4789999853 1 3367777764 599999999886 689999998 8899999999998875
No 38
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=1.8e-44 Score=364.57 Aligned_cols=351 Identities=15% Similarity=0.258 Sum_probs=286.4
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|+|+.+++.++ ++.+.+++.+... .....|++ +..++++++++++.+.+| +++++++|++
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~--~~~~~~~~l~~~l~~~~g--~~~~~~~v~~ 95 (391)
T 4dq6_A 32 NDLLPMWVADMDFKAAPCIIDSLKNRLE------------QEIYGYTT--RPDSYNESIVNWLYRRHN--WKIKSEWLIY 95 (391)
T ss_dssp SCSEECCSSSCSSCCCHHHHHHHHHHHT------------TCCCCCBC--CCHHHHHHHHHHHHHHHC--CCCCGGGEEE
T ss_pred CCceeccccCCCCCCCHHHHHHHHHHHh------------CCCCCCCC--CCHHHHHHHHHHHHHHhC--CCCcHHHeEE
Confidence 57899999988765 4556555544111 11345654 569999999999998877 4567899999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecC--CCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCD--SSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~--~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
|+|+++++..++.+++++||+|+++.|+|..+...++.. |.+++.++++ ++++|.+|+++++++++ ++++
T Consensus 96 ~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~d~~~l~~~l~-------~~~~ 167 (391)
T 4dq6_A 96 SPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNN-NRELIISPLQKLENGNYIMDYEDIENKIK-------DVKL 167 (391)
T ss_dssp ESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHHHHT-TCEEEECCCEECTTSCEECCHHHHHHHCT-------TEEE
T ss_pred cCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHc-CCeEEeeeeeecCCCceEeeHHHHHHHhh-------cCCE
Confidence 999999999999999999999999999999999988876 9999999987 56678899999999875 2889
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+.+ ..+.++..+..+ ..+++++++|+||.+|+
T Consensus 168 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~----~~~~~i~~~s~sK~~g~ 242 (391)
T 4dq6_A 168 FILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKK-HKHIPMASISKE----FEKNTITCMAPTKTFNI 242 (391)
T ss_dssp EEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTT-CCCCCGGGSCHH----HHHTEEEEECSHHHHTC
T ss_pred EEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCC-CCccCHHHcCcc----ccCcEEEEEechhhccC
Confidence 9999999999999999999999999999999999999999887765 444555544221 13678999999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhhh---cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc-C-Ccee
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSS---FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ-V-GIGC 357 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~-gi~~ 357 (483)
+|+|+||++++++.+.+.+..... .+.++++++.++..++... .+++++.+++++++++++.+.|++ . |+.+
T Consensus 243 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 319 (391)
T 4dq6_A 243 AGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNG---ESWLESFLEYLESNIDFAIKYINENMPKLKV 319 (391)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred cccceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHHHhhCCCCEe
Confidence 999999999976567666655432 2357788888887777642 345777888899999999999987 3 8999
Q ss_pred ecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 358 LKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 358 ~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
..+.+++++|++++... ....++++.|++++||.++||+.|+...++++||+++ .+++++++++++|++++
T Consensus 320 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 320 RKPEGTYLLWVDFSALG-----LSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA-CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp CCCSBSSEEEEECGGGC-----CCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC-SCHHHHHHHHHHHHHHH
T ss_pred cCCCccEEEEEEhhhcC-----CCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc-CCHHHHHHHHHHHHHHh
Confidence 99999999999997521 0133778888876699999999998767789999998 68999999999999876
No 39
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=1e-43 Score=362.79 Aligned_cols=352 Identities=17% Similarity=0.204 Sum_probs=275.1
Q ss_pred CCcccccchhh-----hh-cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 46 NGVIQMGLAEN-----LL-CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 46 ~~~i~l~~~~n-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
.++|+|+.+++ ++ +++.+.+++.+... .....|++..|.++||+++++++....+. . .+
T Consensus 38 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~lr~~ia~~~~~~~~~--~-~~ 102 (418)
T 3rq1_A 38 ENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSD------------SEHVGYAPIAGIPDFLCAAEKECFGNFRP--E-GH 102 (418)
T ss_dssp GGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCH------------HHHHSCCCTTCCHHHHHHHHHHHHGGGCC--S-SE
T ss_pred CCeEECCCCcccCCCCCccccHHHHHHHHHhcc------------cccCCCCCCCChHHHHHHHHHHHhcccCc--c-cc
Confidence 36789999964 43 35666776655211 12457998889999999999999765431 1 12
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
++|++|+|+++++..++.++++|||+|+++.|+|..|...++.. |.+++.++++++ +|.+|++.|++++++.... +
T Consensus 103 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~--~ 178 (418)
T 3rq1_A 103 IRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDT-GRTLVTYSLFDE-HNNFNHEAFQNRVNELAAK--Q 178 (418)
T ss_dssp EEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHT-TCEEEEECSBCT-TSSBCHHHHHHHHHHHHHH--C
T ss_pred ccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHc-CCEEEEEeeeCC-CCCcCHHHHHHHHHHhhcc--C
Confidence 39999999999999999999999999999999999999988876 999999998654 3789999999999753221 3
Q ss_pred ee-EEEEeCC-CCCCcCCCCHHHHHHHHHHHh------hcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCe--
Q 011570 200 IK-GVLITNP-SNPLGTFLDRETLKDIVSFIN------EKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNL-- 269 (483)
Q Consensus 200 ~~-~i~l~~P-~NPtG~~~~~~~l~~i~~~a~------~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~-- 269 (483)
++ ++++++| |||||.+++.+++++|+++|+ +||++||+||+|.++.+.+ ....++...... ..++
T Consensus 179 ~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~-~~~~~~~~~~~~----~~~~~~ 253 (418)
T 3rq1_A 179 TNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEK-DEVRAFFNKFSH----LPKEIL 253 (418)
T ss_dssp SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCH-HHHHGGGGGGTT----CCTTEE
T ss_pred CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCCh-HHHHHHHHHHHh----cCCCce
Confidence 44 7899999 999999999999999999999 8999999999998876544 222233222221 1234
Q ss_pred EEEEecCccccCCCCceEEEEEe--cChHHHHHHHHhh------hcCCCChHHHHHHHHhcCChhHH---HHHHHHHHHH
Q 011570 270 IHIVYSLSKDMGFPGFRVGIIYS--YNDQVVSCARKMS------SFGLVSSQTQHLIATMLSDDQFV---EKFIAESAKR 338 (483)
Q Consensus 270 vi~~~S~SK~~g~~GlRiG~li~--~~~~l~~~~~~~~------~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~ 338 (483)
+++++||||.+|++|+|+||+++ .++.+.+.+.... .+..++.++|.++..++.+.++. .+..++.++.
T Consensus 254 ~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 333 (418)
T 3rq1_A 254 TCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQL 333 (418)
T ss_dssp EEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 58899999999999999999998 3556665554432 22457889999999999887532 3344566788
Q ss_pred HHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccC
Q 011570 339 IAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANM 418 (483)
Q Consensus 339 l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~ 418 (483)
++++++++.+.|.++|+++.++.+|+|+|++++. ..++++.| +++||.++|| ++++||+++..
T Consensus 334 ~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~l-~~~gi~v~~g-------~~~iRis~~~~ 396 (418)
T 3rq1_A 334 IRDRADIFKQEAAQVGLPMLPYRGGFFITIPTDS---------ANAICEEL-KKEHIYVIAL-------ANGIRIAACGI 396 (418)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCCCSSSEEEEECTT---------HHHHHHHH-HHTTEECEEC-------SSEEEEEGGGS
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCceEEEEcCCCC---------HHHHHHHH-HhCCEEEecC-------CCCeEEEEecC
Confidence 9999999999999889999999999999998752 23566654 5779999997 35799999866
Q ss_pred CHHHHHHHHHHHHHHHHHhh
Q 011570 419 DDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 419 ~~e~l~~~l~~L~~~l~~~~ 438 (483)
+++++++++++|++++++..
T Consensus 397 ~~~~i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 397 PKCQMTGLAEKIYNAMKSLG 416 (418)
T ss_dssp CHHHHTTHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999997653
No 40
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=1.3e-44 Score=380.39 Aligned_cols=357 Identities=15% Similarity=0.196 Sum_probs=271.9
Q ss_pred cccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHH-HhhhCCCCC-cCCCcEEEe
Q 011570 48 VIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFM-GKVRGNRIT-FDPDRIVMS 125 (483)
Q Consensus 48 ~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~-~~~~g~~~~-~~~~~i~it 125 (483)
+|+|+.+++.++++.+.+.+.+. . ....|+++.|..+||+++++++ .+.++..+. .++++|++|
T Consensus 106 ~i~l~~g~~~~~~~~~~~al~~~-------------~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t 171 (546)
T 2zy4_A 106 SLSYVRDQLGLDPAAFLHEMVDG-------------I-LGCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAV 171 (546)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHH-------------H-HTCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEE
T ss_pred hhecccCCCCCCChHHHHHHHHh-------------h-hcCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEE
Confidence 67888888777655444433320 0 1257999999999999988765 443331121 256899999
Q ss_pred CChhHHHHHHHHH-----hcCCCCeEEEeCCCCcChHHHHhhh-cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 126 GGATGAHETVAFC-----LADPGDAFLVPTPYYPGFDRDLRWR-TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 126 ~G~~~al~~~~~~-----l~~~gd~Vlv~~P~y~~~~~~~~~~-~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
+|+++++..++.+ +++|||.|++++|+|+.|...+... .|.++++++++++++|.+|++.|++++. .+
T Consensus 172 ~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~------~~ 245 (546)
T 2zy4_A 172 EGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKD------PA 245 (546)
T ss_dssp EHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS------TT
T ss_pred CCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhC------CC
Confidence 9999999999988 5799999999999999998875432 2789999999887889999999987653 37
Q ss_pred eeEEEEeCCCCCCcCCCCHHHHHHHHHHH--hhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCc
Q 011570 200 IKGVLITNPSNPLGTFLDRETLKDIVSFI--NEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLS 277 (483)
Q Consensus 200 ~~~i~l~~P~NPtG~~~~~~~l~~i~~~a--~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~S 277 (483)
+++|+++|||||||.+++.+++++|+++| +++|++||+||+|.++.+. +.++.... .+++|+++|||
T Consensus 246 ~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~----~~s~~~~~-------~~~~i~~~S~S 314 (546)
T 2zy4_A 246 IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD----FQSLFAIC-------PENTLLVYSFS 314 (546)
T ss_dssp EEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT----CCCHHHHC-------GGGEEEEEEST
T ss_pred CeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc----CcCHHHhC-------CCCEEEEEeCc
Confidence 89999999999999999999999999999 7899999999999986532 24555542 36899999999
Q ss_pred cccCCCCceEEEEEecChHHHHHHHH-------------h-------------------------hhcCCCChHHHHHH-
Q 011570 278 KDMGFPGFRVGIIYSYNDQVVSCARK-------------M-------------------------SSFGLVSSQTQHLI- 318 (483)
Q Consensus 278 K~~g~~GlRiG~li~~~~~l~~~~~~-------------~-------------------------~~~~~~s~~~q~~~- 318 (483)
|.+|++|+|+||++++++.+.+.+.. . .....++.+.|.++
T Consensus 315 K~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a 394 (546)
T 2zy4_A 315 KYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMA 394 (546)
T ss_dssp TTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHH
T ss_pred cccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHH
Confidence 99999999999999966534444311 1 11134677888764
Q ss_pred ----HHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhh---ccCh-------HHHHH
Q 011570 319 ----ATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLK---EQTY-------EAEMA 384 (483)
Q Consensus 319 ----~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~---~~~~-------~~~~~ 384 (483)
++++.+. +.+.++.++.++++++.+.+.|. .++.+.++++|+|+|++++.+.. ...+ ..+.+
T Consensus 395 ~~a~~all~~~---~~~~~~~r~~~~~r~~~l~~~L~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~ 470 (546)
T 2zy4_A 395 LFSLFALMDEA---DEYKHTLKQLIRRRETTLYRELG-MPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGD 470 (546)
T ss_dssp HHHHHHHHCTT---CHHHHHHHHHHHHHHHHHHGGGT-SSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcC-CCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHH
Confidence 3455542 23567788889999999999996 56666788999999999864210 0000 01234
Q ss_pred HHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhhc
Q 011570 385 LWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 385 ~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
++.++++++||.|.||+.|+. +++++||+++..+++++++++++|++++++..++
T Consensus 471 ~l~~ll~~~gV~v~pG~~F~~-~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~~~ 525 (546)
T 2zy4_A 471 MLFRIADETGIVLLPGRGFGS-NRPSGRASLANLNEYEYAAIGRALRKMADELYAE 525 (546)
T ss_dssp HHHHHHHHHSCCCEESSCTTC-SSCEEEEESSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEeCccccCC-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 556677788999999999986 4679999998668999999999999999877654
No 41
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=9.9e-45 Score=372.26 Aligned_cols=357 Identities=14% Similarity=0.138 Sum_probs=285.9
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|+|+.++|+++ ++.+.+++.+... . .....|++..|..++|+++|++++..+| +++++++|++
T Consensus 44 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~----------~-~~~~~y~~~~g~~~lr~~la~~~~~~~g--~~~~~~~i~~ 110 (437)
T 3g0t_A 44 TKFCRMEMGVPGLPAPQIGIETEIQKLR----------E-GVASIYPNLDGLPELKQEASRFAKLFVN--IDIPARACVP 110 (437)
T ss_dssp CCCEECCCCSCCSCCCHHHHHHHHHHHH----------H-TGGGSCCCTTCCHHHHHHHHHHHHHHHC--CCCCGGGEEE
T ss_pred CCEEeccCcCCCCCCCHHHHHHHHHHHh----------C-CcCcCCCCCCChHHHHHHHHHHHHHhhC--CCCCcccEEE
Confidence 46799999998876 4555555543100 0 1226799888999999999999998887 5578899999
Q ss_pred eCChhHHHHHHHHHhc--CCCC--eEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 125 SGGATGAHETVAFCLA--DPGD--AFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 125 t~G~~~al~~~~~~l~--~~gd--~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
|+|+++++..++.+++ ++|| +|+++.|+|..+...++.. |.+++.++++ +.+|.+|++.|++++++ .++
T Consensus 111 t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~-g~~~~~v~~~-~~~~~~d~~~l~~~l~~-----~~~ 183 (437)
T 3g0t_A 111 TVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRIL-GQKFESFDLF-EYRGEKLREKLESYLQT-----GQF 183 (437)
T ss_dssp ESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHH-TCCCEEEEGG-GGCTTHHHHHHHHHHTT-----TCC
T ss_pred eCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHc-CCEEEEEeec-CCCCccCHHHHHHHHhc-----CCc
Confidence 9999999999999998 9999 9999999999999998886 9999999997 45788999999999842 378
Q ss_pred eEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc---chH-HHhhhhccccCCCeEEEEecC
Q 011570 201 KGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF---VSI-AEIIDQDIACNRNLIHIVYSL 276 (483)
Q Consensus 201 ~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~---~s~-~~l~~~~~~~~~~~vi~~~S~ 276 (483)
++|++++||||||.+++.+++++|+++|+++|++||+||+|+++.+.+..+. .++ ..+.. ..+++++++|+
T Consensus 184 ~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~s~ 258 (437)
T 3g0t_A 184 CSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVAN-----YTDNYILALSS 258 (437)
T ss_dssp CEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGG-----TCSCEEEEEES
T ss_pred eEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCC-----CCCcEEEEEcC
Confidence 9999999999999999999999999999999999999999998766541111 011 22321 25789999999
Q ss_pred ccccCCCCceEEEEEecChHHHH-H-----------------HHHhh--hcCCCChHHHHHHHHhcCChhHHHHHHHHHH
Q 011570 277 SKDMGFPGFRVGIIYSYNDQVVS-C-----------------ARKMS--SFGLVSSQTQHLIATMLSDDQFVEKFIAESA 336 (483)
Q Consensus 277 SK~~g~~GlRiG~li~~~~~l~~-~-----------------~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 336 (483)
||.+|++|+|+||++++ +.+.+ . +.... ..+.+++++|.++..++........++++.+
T Consensus 259 sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 337 (437)
T 3g0t_A 259 SKAFSYAGQRIGVLMIS-GKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSV 337 (437)
T ss_dssp TTTTSCGGGCCEEEEEC-HHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHH
T ss_pred ccCCCCccceeEEEEEC-HHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHH
Confidence 99999999999999995 55555 3 33322 2356888999999888865432112267778
Q ss_pred HHHHHHHHHHHHhhhcCCceee-------cCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCC
Q 011570 337 KRIAERHKAFTWGLSQVGIGCL-------KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPG 409 (483)
Q Consensus 337 ~~l~~~~~~l~~~L~~~gi~~~-------~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~ 409 (483)
++++++++++.+.|+++|+++. ++.+++|+|++++ ..+ ..++++.|++ +||.+.||..|+...++
T Consensus 338 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~l~~~L~~-~gi~v~~~~~~~~~~~~ 409 (437)
T 3g0t_A 338 IEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGYK-GMD------SSKLIEKFVR-YGMCAITLKTTGSKRNE 409 (437)
T ss_dssp HHHHHHHHHHHHHHHTTTEEESSCEETTEECCSSSEEEEEET-TCC------HHHHHHHHHH-TTEECEESTTTTCCCTT
T ss_pred HHHHHHHHHHHHHHHHcCCEEeccccCCCCCceeEEEEEecC-CCC------HHHHHHHHHH-cCeEEeeccccCCCCCC
Confidence 8899999999999999999888 4488899999997 222 2367777775 59999999988765557
Q ss_pred EEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 410 WFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 410 ~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
++||+++..+++++++++++|++++++
T Consensus 410 ~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 410 AMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp CEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 899999866999999999999988753
No 42
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=3.3e-44 Score=368.10 Aligned_cols=350 Identities=19% Similarity=0.281 Sum_probs=275.6
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|+|+.+++.++ ++.+.+++.+.... .........|++..|..+||+++|+|+.+ + +.+++++|++
T Consensus 56 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-------~~~~~~~~~y~~~~g~~~l~~~ia~~~~~--~--~~~~~~~i~~ 124 (432)
T 3ei9_A 56 AQVISLGIGDTTEPIPEVITSAMAKKAHE-------LSTIEGYSGYGAEQGAKPLRAAIAKTFYG--G--LGIGDDDVFV 124 (432)
T ss_dssp CCCEECSSCCCCSCCCHHHHHHHHHHHHH-------TTSTTTCCCCCCTTCCHHHHHHHHHHHHT--T--TTCCGGGEEE
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhc-------ccccCCccCCCCCCCCHHHHHHHHHHHHc--c--CCCCcceEEE
Confidence 47899999988764 44555544431100 00001235788888999999999999974 2 3467899999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCc------------EEEEeecCCCCCcccCHHHHHHHHHH
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGV------------QLVPVVCDSSNDFKVTMEALEAAYEK 192 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~------------~~~~v~~~~~~~~~~d~~~l~~~i~~ 192 (483)
|+|+++++..+ ..++++||.|+++.|+|+++...++.. |. +++.+++++++++..|++.
T Consensus 125 t~G~~~al~~l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------- 195 (432)
T 3ei9_A 125 SDGAKCDISRL-QVMFGSNVTIAVQDPSYPAYVDSSVIM-GQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST------- 195 (432)
T ss_dssp ESCHHHHHHHH-HHHHCTTCCEEEEESCCTHHHHHHHHH-TCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-------
T ss_pred CCChHHHHHHH-HHHcCCCCEEEEeCCCCHHHHHHHHHc-CCcccccccccccCceEEeccCcccCCcCChhh-------
Confidence 99999999975 778899999999999999999888775 63 6788888766666666543
Q ss_pred HHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEE
Q 011570 193 AQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHI 272 (483)
Q Consensus 193 ~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~ 272 (483)
.+++++|++++||||||.+++.+++++|+++|++||++||+||+|.++.+++ .. .++..+.. ..+++++
T Consensus 196 ----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~-~~-~~~~~~~~-----~~~~~i~ 264 (432)
T 3ei9_A 196 ----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDD-NP-RSIFEIPG-----AEEVAME 264 (432)
T ss_dssp ----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSS-CC-SSGGGSTT-----GGGTEEE
T ss_pred ----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCC-CC-CChhhcCC-----CCCeEEE
Confidence 1378999999999999999999999999999999999999999999876664 32 34444422 2367899
Q ss_pred EecCccccCCCCceEEEEEecChH-------HHHHHHHhh--hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHH
Q 011570 273 VYSLSKDMGFPGFRVGIIYSYNDQ-------VVSCARKMS--SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERH 343 (483)
Q Consensus 273 ~~S~SK~~g~~GlRiG~li~~~~~-------l~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~ 343 (483)
++||||+||++|+|+||++++++. +.+.+.... .++.+++++|.++.+++.+.. .+++++.++++++++
T Consensus 265 ~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~ 342 (432)
T 3ei9_A 265 TASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEG--LEAMHKVIGFYKENT 342 (432)
T ss_dssp EEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHH--HHHHHHHHHHHHHHH
T ss_pred EecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhccc--HHHHHHHHHHHHHHH
Confidence 999999999999999999996655 144444332 234578899999888887533 356788889999999
Q ss_pred HHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHH
Q 011570 344 KAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTM 423 (483)
Q Consensus 344 ~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l 423 (483)
+++.+.|.++|+++..+.+++|+|++++. .+ ..+++..+++++||.++||+.|+..+++++||+++ .+++++
T Consensus 343 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-~~------~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~-~~~e~l 414 (432)
T 3ei9_A 343 NIIIDTFTSLGYDVYGGKNAPYVWVHFPN-QS------SWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAF-GHRENI 414 (432)
T ss_dssp HHHHHHHHHTTCCEEECSSSSEEEEECTT-SC------HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC-SCHHHH
T ss_pred HHHHHHHHHCCceecCCCcceEEEEECCC-CC------HHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEec-CCHHHH
Confidence 99999999999998888788999999983 11 33778888888899999999998767889999996 599999
Q ss_pred HHHHHHHHHHHHH
Q 011570 424 EIALSRITSFMLK 436 (483)
Q Consensus 424 ~~~l~~L~~~l~~ 436 (483)
++++++|++--+.
T Consensus 415 ~~~l~rl~~~~~~ 427 (432)
T 3ei9_A 415 LEACRRFKQLYKH 427 (432)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhh
Confidence 9999999875543
No 43
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=9.9e-44 Score=363.54 Aligned_cols=324 Identities=17% Similarity=0.215 Sum_probs=257.1
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHH--HHHHHHhcCC------------CCeEEEeCCC
Q 011570 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAH--ETVAFCLADP------------GDAFLVPTPY 152 (483)
Q Consensus 87 ~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al--~~~~~~l~~~------------gd~Vlv~~P~ 152 (483)
..+|+++.|.++||+++|+|++ +++++|++|+|+++++ .+++.++..+ +|+|+++.|+
T Consensus 69 ~~~Y~~~~G~~~lr~~ia~~~~--------~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~ 140 (422)
T 3d6k_A 69 CRNYGGLLGIADIRELWAEALG--------LPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPG 140 (422)
T ss_dssp TTSSCCSSCCHHHHHHHHHHHT--------CCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESC
T ss_pred hhCCCCCCCCHHHHHHHHHHhC--------CChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCc
Confidence 5689999999999999999985 5789999999999997 6777877765 3579999999
Q ss_pred CcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE-EeCCCCCCcCCCCHHHHHHHHHHHh-h
Q 011570 153 YPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL-ITNPSNPLGTFLDRETLKDIVSFIN-E 230 (483)
Q Consensus 153 y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~-l~~P~NPtG~~~~~~~l~~i~~~a~-~ 230 (483)
|+.+...++.. |++++.+|+++++ +|++.|++++++ .++++|+ +++||||||.+++.+++++|+++|+ +
T Consensus 141 y~~~~~~~~~~-g~~~~~v~~~~~g---~d~~~l~~~l~~-----~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~ 211 (422)
T 3d6k_A 141 YDRHFTITEHF-GFEMINVPMTDEG---PDMGVVRELVKD-----PQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAA 211 (422)
T ss_dssp CHHHHHHHHHH-TCEEEEEEEETTE---ECHHHHHHHHTS-----TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSS
T ss_pred cHHHHHHHHHc-CCEEEecCCCCCC---CCHHHHHHHHhc-----CCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhc
Confidence 99999998886 9999999997643 899999998853 2688888 6899999999999999999999999 9
Q ss_pred cCcEEEEccccccCccCCC-CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc--
Q 011570 231 KNIHLVCDEIYAATVFTKE-SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF-- 307 (483)
Q Consensus 231 ~~~~iI~Deay~~~~~~~~-~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~-- 307 (483)
+|++||+||+|.++.|..+ ..+.++.++.... ...+++++++||||. +++|+|+||++++ +.+.+.+......
T Consensus 212 ~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~S~SK~-~~~GlriG~~~~~-~~l~~~l~~~~~~~~ 287 (422)
T 3d6k_A 212 PDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAA--GNPNRFWFMSSTSKI-THAGSGVSFFASS-KENIEWYASHANVRG 287 (422)
T ss_dssp TTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHT--TCTTCEEEEEESTTT-SCTTSSCEEEECC-HHHHHHHHHHHHHHC
T ss_pred cCCEEEEECCccccccCCCCCCCcChhhHhhcc--CCCCcEEEEcChhhh-cCcccceEEEEeC-HHHHHHHHHHHHhhc
Confidence 9999999999986334321 2344654442100 035789999999999 6799999999994 6666665554332
Q ss_pred CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc----CC-ceeecCCceEEEeeecCchhhccChHHH
Q 011570 308 GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ----VG-IGCLKSNAGLFLWMDLHHLLKEQTYEAE 382 (483)
Q Consensus 308 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~g-i~~~~~~~g~f~~~~l~~~~~~~~~~~~ 382 (483)
+.+++++|.++..++.+.+.+.+++++.++.++++++.+.+.|.+ .| +.+..|.+|+|+|++++.. + .
T Consensus 288 ~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~-~------~ 360 (422)
T 3d6k_A 288 IGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG-T------A 360 (422)
T ss_dssp SCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTT-C------H
T ss_pred CCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCC-C------H
Confidence 558899999999999983334677888888999999988887765 33 6777888999999999853 1 2
Q ss_pred HHHHHHHHHhcCeEeeC-CCCCCC---CCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhh
Q 011570 383 MALWRVIINEVKLNVSP-GSSFHC---PNPGWFRVCFANMDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 383 ~~~~~~Ll~~~gV~v~p-g~~f~~---~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
..+.. +++++||.++| |..|.. ..++++||+++..+++++++++++|++++++...
T Consensus 361 ~~~~~-~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 361 SRVVE-LAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGFATCVLMAAL 420 (422)
T ss_dssp HHHHH-HHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 24444 55678999999 555641 1357999999856899999999999999877643
No 44
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=8.8e-44 Score=357.30 Aligned_cols=338 Identities=22% Similarity=0.370 Sum_probs=274.4
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|+|+.++++++ ++.+.+++.+... .....|++..|..+||+++|++++..+| +++++++|++
T Consensus 29 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~~~~~l~~~la~~~~~~~g--~~~~~~~v~~ 94 (370)
T 2z61_A 29 KKVIHLEIGEPDFNTPKPIVDEGIKSLK------------EGKTHYTDSRGILELREKISELYKDKYK--ADIIPDNIII 94 (370)
T ss_dssp CCCEECCCCSCSSCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHHSS--CCCCGGGEEE
T ss_pred CCEEEccCCCCCCCCCHHHHHHHHHHHH------------cCccCCCCCCCCHHHHHHHHHHHHHHhC--CCCChhhEEE
Confidence 46789999988764 4445554433100 1135788888899999999999998776 5578899999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++.+++++||+|++++|+|+.+...++.. |.+++.++ +|+++|++++.+ ++++|+
T Consensus 95 ~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~v~--------~d~~~l~~~l~~------~~~~v~ 159 (370)
T 2z61_A 95 TGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFL-GAKPVFCD--------FTVESLEEALSD------KTKAII 159 (370)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHT-TCEEEEEC--------SSHHHHHHHCCS------SEEEEE
T ss_pred CCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHc-CCEEEEeC--------CCHHHHHHhccc------CceEEE
Confidence 999999999999999999999999999999999988876 99999887 578999888753 789999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
+++||||||.+++.+ |+++|+++|++||+||+|.++.+++ . +.++..+.. ..+++++++||||.+|++|
T Consensus 160 ~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g-~-~~~~~~~~~-----~~~~~i~~~s~sK~~~~~G 228 (370)
T 2z61_A 160 INSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEG-K-CYSAIEFDE-----NLEKTILINGFSKLYAMTG 228 (370)
T ss_dssp EESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSS-C-CCCGGGTCT-----TCSSEEEEEESTTTTTCGG
T ss_pred EcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCC-C-CcCHHHccC-----CCCcEEEEecChhccCCcc
Confidence 999999999999966 8899999999999999999876654 2 245444421 3478999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCc
Q 011570 285 FRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNA 362 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~ 362 (483)
+|+||++++ +.+.+.+...... +.+++++|.++.+++.... .+++++.++.++++++++.+.|.+.|+++..+.+
T Consensus 229 ~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 305 (370)
T 2z61_A 229 WRIGYVISN-DEIIEAILKLQQNLFISAPTISQYAALKAFEKET--EREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIG 305 (370)
T ss_dssp GCCEEEECC-HHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCCCB
T ss_pred ceEEEEEEC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccC--HHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCc
Confidence 999999994 5666665544332 4578899999888887511 4457778888999999999999988998888889
Q ss_pred eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 363 GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 363 g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
|+|+|++++. + ..+++..|++++||.+.||+.|+..+++++||+++ .+++++++++++|+++++
T Consensus 306 ~~~~~~~~~~--~------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~-~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 306 AYYVFPNIGE--D------GREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA-NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp TTEECCBCSS--C------HHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC-SCHHHHHHHHHHHHHHHC
T ss_pred ceEEEEecCC--C------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-CCHHHHHHHHHHHHHHHh
Confidence 9999999874 1 23678888866799999999886544679999999 699999999999998764
No 45
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.8e-43 Score=362.08 Aligned_cols=326 Identities=16% Similarity=0.202 Sum_probs=263.8
Q ss_pred ccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHH--HHHHHHhcC--C----------CCeEEEeCC
Q 011570 86 GIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAH--ETVAFCLAD--P----------GDAFLVPTP 151 (483)
Q Consensus 86 ~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al--~~~~~~l~~--~----------gd~Vlv~~P 151 (483)
...+|++..|.++||++||++++ +++++|++|+|+++++ .+++.++++ | ||+|++++|
T Consensus 70 ~~~~Y~~~~g~~~lr~~ia~~~~--------~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p 141 (427)
T 3ppl_A 70 DVRNYGGLDGIVDIRQIWADLLG--------VPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVP 141 (427)
T ss_dssp BTTSSCCSSCCHHHHHHHHHHHT--------SCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEES
T ss_pred hhcCCCCCCCcHHHHHHHHHHhC--------CCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCC
Confidence 45789999999999999999985 6789999999999999 588888877 6 899999999
Q ss_pred CCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEe-CCCCCCcCCCCHHHHHHHHHHH-h
Q 011570 152 YYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLIT-NPSNPLGTFLDRETLKDIVSFI-N 229 (483)
Q Consensus 152 ~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~-~P~NPtG~~~~~~~l~~i~~~a-~ 229 (483)
+|..+...++.. |.+++.+|+++++ +|++.|+++++. +++++|+++ +||||||.+++.+++++|+++| +
T Consensus 142 ~y~~~~~~~~~~-g~~~~~v~~~~~g---~d~~~l~~~l~~-----~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~ 212 (427)
T 3ppl_A 142 GYDRHFSITERF-GFEMISVPMNEDG---PDMDAVEELVKN-----PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETA 212 (427)
T ss_dssp CCHHHHHHHHHT-TCEEEEEEEETTE---ECHHHHHHHTTS-----TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCS
T ss_pred CcHHHHHHHHHc-CCEEEEeCCCCCC---CCHHHHHHHHhc-----CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhh
Confidence 999999999886 9999999998643 999999998842 378888755 7899999999999999999999 9
Q ss_pred hcCcEEEEccccccCccCCCC-CcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh--
Q 011570 230 EKNIHLVCDEIYAATVFTKES-SFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS-- 306 (483)
Q Consensus 230 ~~~~~iI~Deay~~~~~~~~~-~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~-- 306 (483)
++|++||+||+|.++.|.+.. .+.++..+.... ...+++++++||||. +++|+|+||+++ ++.+.+.+.....
T Consensus 213 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~S~SK~-~~~G~r~G~~~~-~~~l~~~~~~~~~~~ 288 (427)
T 3ppl_A 213 APDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAA--GNPNRFWAFTSTSKI-TLAGAGVSFFLT-SAENRKWYTGHAGIR 288 (427)
T ss_dssp STTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHT--TCTTSEEEEEESTTT-SCTTSSCEEEEC-CHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcccccCCCCCCccchhhhhhcc--CCCCcEEEEechhhc-cCcCccEEEEEc-CHHHHHHHHHHhhcc
Confidence 999999999999988776521 233555542100 034789999999999 679999999999 4666666554432
Q ss_pred cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc----C-CceeecCCceEEEeeecCchhhccChHH
Q 011570 307 FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ----V-GIGCLKSNAGLFLWMDLHHLLKEQTYEA 381 (483)
Q Consensus 307 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~-gi~~~~~~~g~f~~~~l~~~~~~~~~~~ 381 (483)
.+.++++.|.+++.++.+.+.+.+++++.++.++++++.+.+.|.+ . ++.+..|.+|+|+|++++.. +
T Consensus 289 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~-~------ 361 (427)
T 3ppl_A 289 GIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPG-T------ 361 (427)
T ss_dssp CSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTT-C------
T ss_pred cCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcc-h------
Confidence 3557899999999999984445777888889999998888888765 2 57778888999999999853 1
Q ss_pred HHHHHHHHHHhcCeEeeC-CCCCCC---CCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhhc
Q 011570 382 EMALWRVIINEVKLNVSP-GSSFHC---PNPGWFRVCFANMDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 382 ~~~~~~~Ll~~~gV~v~p-g~~f~~---~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
..++...+ .++||.++| |..|.. ..++++||+++..+++++++++++|++++++...+
T Consensus 362 ~~~~~~~l-~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l~~~~~~ 423 (427)
T 3ppl_A 362 ASRVAELA-KEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVATCVLLAAAE 423 (427)
T ss_dssp HHHHHHHH-HHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 22555554 567999999 555642 24689999998668999999999999999877544
No 46
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=4.9e-43 Score=356.28 Aligned_cols=359 Identities=18% Similarity=0.291 Sum_probs=283.0
Q ss_pred Ccccccchhhhh---cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 47 GVIQMGLAENLL---CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 47 ~~i~l~~~~n~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
++|||+.+.+.. +++.+.+++.+.... . ..... |++..|..++|+++|+++.+.+| +++++++|+
T Consensus 35 ~~idl~~g~~~~~~~~~~~v~~a~~~~~~~------~---~~~~~-y~~~~~~~~l~~~la~~~~~~~g--~~~~~~~v~ 102 (407)
T 2zc0_A 35 KLISLAAGDPDPELIPRAVLGEIAKEVLEK------E---PKSVM-YTPANGIPELREELAAFLKKYDH--LEVSPENIV 102 (407)
T ss_dssp CCEECCSCCCCTTTSCHHHHHHHHHHHHHH------C---GGGGS-CCCTTCCHHHHHHHHHHHHHHSC--CCCCGGGEE
T ss_pred ceEeCCCCCCCchhCCHHHHHHHHHHHHhh------c---ccccc-CCCCCCCHHHHHHHHHHHHHhcC--CCCCcceEE
Confidence 578887775432 445555554431000 0 01235 88888999999999999977666 446789999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.+++++||+|+++.|+|..+...++.. |.+++.++++++ .+|++.|+++++....++.++++|
T Consensus 103 ~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~v 178 (407)
T 2zc0_A 103 ITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQL-GAKIEGVPVDND---GMRVDLLEEKIKELKAKGQKVKLI 178 (407)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTT-TCEEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEE
T ss_pred EecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHc-CCEEEEcccCCC---CCCHHHHHHHHHhhhcccCCceEE
Confidence 9999999999999999999999999999999999888875 999999998753 389999999987432223468887
Q ss_pred -EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 204 -LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 204 -~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
++++|+||||.+++.+++++|+++|+++|++||+||+|.++.+++ ..+.++..+. ..+++++++||||.+|
T Consensus 179 ~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~------~~~~~i~~~s~sK~~~- 250 (407)
T 2zc0_A 179 YTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEG-GDIVPLKALD------NEGRVIVAGTLSKVLG- 250 (407)
T ss_dssp EECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSC-SSCCCGGGGC------SSCCEEEEEESTTTTC-
T ss_pred EECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCC-CCCCChhhcC------CCCCEEEEcccccccC-
Confidence 578999999999999999999999999999999999999887765 4444555442 2368899999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHH-HHHHHHHHHHHHHHHHHHHhhhcC--Ccee
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVE-KFIAESAKRIAERHKAFTWGLSQV--GIGC 357 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~-~~~~~~~~~l~~~~~~l~~~L~~~--gi~~ 357 (483)
+|+|+||++++ +.+.+.+...... ...+++.|.++..++.... .. +++++.+++++++++++.+.|.+. |+++
T Consensus 251 ~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 328 (407)
T 2zc0_A 251 TGFRIGWIIAE-GEILKKVLMQKQPIDFCAPAISQYIALEYLKRGY-FEKYHLEGALLGYKEKRDIMLKALENHLPNAEF 328 (407)
T ss_dssp TTSCCEEEECC-HHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTH-HHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCB
T ss_pred CCcceEEEecC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCC-chHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 99999999994 6666666554332 3368889999988887653 24 567778888899999999999874 6887
Q ss_pred ecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC--CCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 358 LKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP--NPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 358 ~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~--~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
..+.+|+|+|++++...+ ..++++.|++++||.+.||..|... .++++||+++..+++++++++++|+++++
T Consensus 329 ~~~~~~~~~~~~~~~~~~------~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~ 402 (407)
T 2zc0_A 329 TKPIAGMFVMFFLPEGAD------GISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKLYK 402 (407)
T ss_dssp CCCSBSSEEEEECSTTCC------HHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHHHH
T ss_pred ecCCCcEEEEEEcCCCCC------HHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 778888999999975322 2367888887679999999988653 45799999985578999999999999987
Q ss_pred Hh
Q 011570 436 KN 437 (483)
Q Consensus 436 ~~ 437 (483)
+.
T Consensus 403 ~~ 404 (407)
T 2zc0_A 403 EK 404 (407)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 47
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=6.5e-44 Score=364.76 Aligned_cols=354 Identities=19% Similarity=0.253 Sum_probs=290.8
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
..++|+|+.+++.++ ++.+.+++.+... .....|++. ..++++++++++.+.++ +++++++|+
T Consensus 60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~--~~~l~~~l~~~l~~~~g--~~~~~~~v~ 123 (421)
T 3l8a_A 60 NPELLQMWVADMDFLPVPEIKEAIINYGR------------EHIFGYNYF--NDDLYQAVIDWERKEHD--YAVVKEDIL 123 (421)
T ss_dssp CTTCEECCSSCCCSCCCHHHHHHHHHHHH------------HCCSSCBCC--CHHHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCCeeecccCCCCCCCCHHHHHHHHHHHh------------cCCcCCCCC--CHHHHHHHHHHHHHHhC--CCCCHHHEE
Confidence 457899999987775 4555555543110 123457654 38999999999998887 456789999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecC-CCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCD-SSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
+|+|+++++..++.+++++||+|+++.|+|.++...+... |.+++.+|++ .+++|.+|++.|++++.+ .++++
T Consensus 124 ~~~g~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~le~~i~~-----~~~~~ 197 (421)
T 3l8a_A 124 FIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLN-DHRLVENSLQIINGRFEIDFEQLEKDIID-----NNVKI 197 (421)
T ss_dssp EESCHHHHHHHHHHHHSCTEEEEEEEESCCHHHHHHHHHT-TEEEEEEECEEETTEEECCHHHHHHHHHH-----TTEEE
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHC-CCEEEeccccccCCCeeeCHHHHHHHhhc-----cCCeE
Confidence 9999999999999999999999999999999999988876 9999999986 566788999999999974 37999
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
|++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++ ..+.++..+..+ ..++++++.|+||.+|+
T Consensus 198 vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~----~~~~~i~~~s~sK~~g~ 272 (421)
T 3l8a_A 198 YLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFG-NTHHSLNTLDAS----YKDFTIILSSATKTFNI 272 (421)
T ss_dssp EEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT-CCCCCGGGSCTT----GGGTEEEEECSHHHHTC
T ss_pred EEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCccHHHcCch----hcCcEEEEEeChhhccC
Confidence 9999999999999999999999999999999999999999987776 555565554321 13678999999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhh---hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceee
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMS---SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCL 358 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~---~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~ 358 (483)
+|+|+||++++++.+.+.+.... .++..+++++.++.+++... .+++++.++.++++++++.+.|+++ ++.+.
T Consensus 273 ~G~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~ 349 (421)
T 3l8a_A 273 AGTKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYG---KPWLEELKTVIEGNIKLVIKELEAKTKIKVM 349 (421)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCSCEEE
T ss_pred chhheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhCCCceEe
Confidence 99999999996577777665443 23457888888888777632 3457788888999999999999885 89999
Q ss_pred cCCceEEEeeecCch-hhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 359 KSNAGLFLWMDLHHL-LKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 359 ~~~~g~f~~~~l~~~-~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
.+.+++++|++++.. .+ ..++...|++++||.+.||..|+..+++++||+++ .+++++++++++|+++++
T Consensus 350 ~~~~~~~~~v~~~~~~~~------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~-~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 350 EPEGTYLVWLDFSAYAIA------QPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA-TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp CCSBSSEEEEECGGGTCC------TTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC-SCHHHHHHHHHHHHHHC-
T ss_pred CCCeeEEEEEeccccCCC------HHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec-CCHHHHHHHHHHHHHHHh
Confidence 999999999999752 22 12678888878899999999998666789999998 699999999999998764
No 48
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=4.4e-43 Score=357.51 Aligned_cols=349 Identities=15% Similarity=0.234 Sum_probs=273.9
Q ss_pred CCcccccchhh-----hh-cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 46 NGVIQMGLAEN-----LL-CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 46 ~~~i~l~~~~n-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
.++|+|+.++. ++ +++.+.+++.+... .....|++..|.+++|+++++++....+. .++
T Consensus 37 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~------------~~~~~Y~~~~g~~~lr~~la~~~~~~~~~---~~~ 101 (413)
T 3t18_A 37 EAVINAALGTLLDDKGKIIALPSVYDRLDEMDR------------SHIASYAPIEGEKDYRKIVIDTLFGPYKP---EGY 101 (413)
T ss_dssp GGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCH------------HHHHSCCCTTCCHHHHHHHHHHHHGGGCC---SSE
T ss_pred cceEeccccCccCCCCCcCChHHHHHHHHhcCc------------ccccCcCCCCCCHHHHHHHHHHHhcccCc---ccc
Confidence 36789999874 43 35666776655211 12457988889999999999999755431 134
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
++|++|+|+++++..++.+++++||+|+++.|+|+.|...++.. |.+++.+|++++ +|.+|++.|++++++.... +
T Consensus 102 ~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~--~ 177 (413)
T 3t18_A 102 ISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKICEEF-GRNFKTFEFFTD-DFAFNIDVYKEAIDEGIRD--S 177 (413)
T ss_dssp EEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHHHHH-TCEEEEECCBCT-TSSBCHHHHHHHHHHHHHH--C
T ss_pred CcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHHHHh-CCeEEEeeccCC-CCCcCHHHHHHHHHHHhhc--C
Confidence 59999999999999999999999999999999999999998886 999999998544 3789999999999753221 3
Q ss_pred ee-EEEEeCC-CCCCcCCCCHHHHHHHHHHHh------hcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCe--
Q 011570 200 IK-GVLITNP-SNPLGTFLDRETLKDIVSFIN------EKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNL-- 269 (483)
Q Consensus 200 ~~-~i~l~~P-~NPtG~~~~~~~l~~i~~~a~------~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~-- 269 (483)
++ ++++++| |||||.+++.+++++|+++|+ ++|++||+||+|.++.+.+ ....++...... ..++
T Consensus 178 ~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~-~~~~~~~~~~~~----~~~~~~ 252 (413)
T 3t18_A 178 DRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDG-DQQRKFFEKFSN----LPRNLF 252 (413)
T ss_dssp SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSS-STTTGGGGGGTT----CCTTEE
T ss_pred CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCCh-hhHHHHHHHHhh----cCCCee
Confidence 55 7888999 999999999999999999999 8999999999999987765 443444433221 1233
Q ss_pred EEEEecCccccCCCCceEEEEEec--ChHHHHHHHHhh------hcCCCChHHHHHHHHhcCChhH--HHHHHHHHHHHH
Q 011570 270 IHIVYSLSKDMGFPGFRVGIIYSY--NDQVVSCARKMS------SFGLVSSQTQHLIATMLSDDQF--VEKFIAESAKRI 339 (483)
Q Consensus 270 vi~~~S~SK~~g~~GlRiG~li~~--~~~l~~~~~~~~------~~~~~s~~~q~~~~~~l~~~~~--~~~~~~~~~~~l 339 (483)
+++++||||.||++|+|+||+++. ++.+.+.+.... .+..++.++|.++..++.+..+ +.++.++.++.+
T Consensus 253 ~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 332 (413)
T 3t18_A 253 VVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNML 332 (413)
T ss_dssp EEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 588999999999999999999983 456665554432 2245788999999999987652 244566778899
Q ss_pred HHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCC
Q 011570 340 AERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMD 419 (483)
Q Consensus 340 ~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~ 419 (483)
+++++++.+.|++.|+++.++++|+|+|+++.. ..++++.| .++||.+.|| ++++||+++..+
T Consensus 333 ~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~l-~~~gv~v~~g-------~~~iRis~~~~~ 395 (413)
T 3t18_A 333 KSRADVFVTAAKENKLTMIPYFGGFFTFIPTDK---------AFDIVKDL-EKENIFTIPS-------AKGIRVAICGVG 395 (413)
T ss_dssp HHHHHHHHHHHHHTTCCCBCCCSSSCEEEECSC---------HHHHHHHH-HHTTEECEEC-------SSEEEECTTTSC
T ss_pred HHHHHHHHHHHHHcCCCccCCCceEEEEeCCCC---------HHHHHHHH-HhCCEEEecC-------CCceEEEEeeCC
Confidence 999999999999999999999999999997742 23666655 5679999997 468999998656
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 011570 420 DRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 420 ~e~l~~~l~~L~~~l~~~~ 438 (483)
++++ +++|.+++++.+
T Consensus 396 ~~~~---l~~l~~~l~~~~ 411 (413)
T 3t18_A 396 EEKI---PKLVQRLAFYTN 411 (413)
T ss_dssp GGGH---HHHHHHHHHHHH
T ss_pred HHHH---HHHHHHHHHHHh
Confidence 6666 888988887764
No 49
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=5.8e-43 Score=349.78 Aligned_cols=321 Identities=17% Similarity=0.293 Sum_probs=261.7
Q ss_pred CCcccccchhhhhcHH-HHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLCHE-LVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|+|+.|+|+++++ .+ . .....+|++. +..+||+++|++++ +++++|++
T Consensus 29 ~~~i~l~~~~~~~~~~~~v-----a--------------~~~~~~Y~~~-~~~~lr~~la~~~~--------~~~~~v~~ 80 (356)
T 1fg7_A 29 NGDVWLNANEYPTAVEFQL-----T--------------QQTLNRYPEC-QPKAVIENYAQYAG--------VKPEQVLV 80 (356)
T ss_dssp TCSEECSSCCCSSCCCCCC-----C--------------CCCTTSCCCS-SCHHHHHHHHHHHT--------SCGGGEEE
T ss_pred CceEEeeCCCCCCCCCHhH-----h--------------hhhhccCCCc-cHHHHHHHHHHHhC--------CChHHEEE
Confidence 4689999999988642 12 1 1234679876 48999999999986 57889999
Q ss_pred eCChhHHHHHHHHHhcCCC-CeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 125 SGGATGAHETVAFCLADPG-DAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~g-d~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
|+|+++++..++.+++++| |+|+++.|+|+.+...++.. |.+++.+++++ +|.+|++++++++. ++++|
T Consensus 81 ~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~i~-------~~~~v 150 (356)
T 1fg7_A 81 SRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETI-GVECRTVPTLD--NWQLDLQGISDKLD-------GVKVV 150 (356)
T ss_dssp ESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHH-TCEEEECCCCT--TSCCCHHHHHTSCT-------TEEEE
T ss_pred cCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHHHHc-CCEEEEeeCCC--CCCCCHHHHHHHhc-------CCCEE
Confidence 9999999999999999999 99999999999999988886 99999999863 57899999987763 57899
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++||||||.+++.+++++|+++|+ +|++||+||+|.++.. . .++..+.. ..+++++++||||.||++
T Consensus 151 ~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~-~----~~~~~~~~-----~~~~~i~~~s~sK~~g~~ 219 (356)
T 1fg7_A 151 YVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCP-Q----ASLAGWLA-----EYPHLAILRTLSKAFALA 219 (356)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSG-G----GCSGGGTT-----TCTTEEEEEESSSTTCCG
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcC-C----CcHHHHHh-----hCCCEEEEecchHhhcCc
Confidence 99999999999999999999999999 9999999999987531 1 22233322 357899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-ceeecCCc
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVG-IGCLKSNA 362 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~~~~~~ 362 (483)
|+|+||+++ ++.+.+.+......+++++++|.++.+++.+.++ +++++.+++++++++++.+.|++++ +....+.+
T Consensus 220 G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 296 (356)
T 1fg7_A 220 GLRCGFTLA-NEEVINLLMKVIAPYPLSTPVADIAAQALSPQGI--VAMRERVAQIIAEREYLIAALKEIPCVEQVFDSE 296 (356)
T ss_dssp GGCCEEEEE-CHHHHHHHHHHSCSSCSCHHHHHHHHHHTSHHHH--HHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCS
T ss_pred hhhhEEEEe-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCccH--HHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCC
Confidence 999999999 5667777766655567899999999999986543 2467788889999999999999885 32334556
Q ss_pred eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeC-CCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHH
Q 011570 363 GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSP-GSSFHCPNPGWFRVCFANMDDRTMEIALSRITS 432 (483)
Q Consensus 363 g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~p-g~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~ 432 (483)
|+|+|++++. ..++++.| .++||.++| |..|+. ++++||+++ +++++++++++|++
T Consensus 297 ~~~~~~~~~~---------~~~l~~~L-~~~gI~v~~~g~~~~~--~~~iRis~~--~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 297 TNYILARFKA---------SSAVFKSL-WDQGIILRDQNKQPSL--SGCLRITVG--TREESQRVIDALRA 353 (356)
T ss_dssp SSEEEEEETT---------HHHHHHHH-HHTTEECEECTTSTTC--TTEEEEECC--CHHHHHHHHHHHHT
T ss_pred CeEEEEECCC---------HHHHHHHH-HHCCEEEEECCCCCCC--CCeEEEEeC--CHHHHHHHHHHHHh
Confidence 7899999871 23677777 467999999 887763 469999998 68999999998875
No 50
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=9.1e-43 Score=347.52 Aligned_cols=336 Identities=17% Similarity=0.214 Sum_probs=276.6
Q ss_pred CCCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcE
Q 011570 44 NPNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRI 122 (483)
Q Consensus 44 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i 122 (483)
.+.++|+|+.++|+++ ++.+.+++.+.. .....|++ .+..+||+++|++++ +++++|
T Consensus 14 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~-------------~~~~~y~~-~~~~~l~~~la~~~~--------~~~~~i 71 (354)
T 3ly1_A 14 STDNPIRINFNENPLGMSPKAQAAARDAV-------------VKANRYAK-NEILMLGNKLAAHHQ--------VEAPSI 71 (354)
T ss_dssp CSSSCEECSSCCCSSCCCHHHHHHHHHTG-------------GGTTSCCH-HHHHHHHHHHHHHTT--------SCGGGE
T ss_pred CCCceEEccCCCCCCCCCHHHHHHHHHHH-------------hhCcCCCC-CchHHHHHHHHHHhC--------CChHHE
Confidence 3567899999999985 556666665421 13456754 478999999999986 578999
Q ss_pred EEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 123 VMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
++|+|+++++..++.+++++||+|+++.|+|..+...++.. |.+++.+++++ ++.+|++.|++++++ .+++++
T Consensus 72 ~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~d~~~l~~~l~~----~~~~~~ 144 (354)
T 3ly1_A 72 LLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIA-GMKVTKVKMLD--NWAFDIEGLKAAVAA----YSGPSI 144 (354)
T ss_dssp EEESHHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHT-TCEEEEECCCT--TSCCCHHHHHHHHHT----CSSCEE
T ss_pred EEeCChHHHHHHHHHHHhCCCCeEEECCCCchHHHHHHHHc-CCEEEEecCCC--CCCCCHHHHHHHhcc----CCCCCE
Confidence 99999999999999999999999999999999999988876 99999999874 478999999999873 137899
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCC-CeEEEEecCccccC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNR-NLIHIVYSLSKDMG 281 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~-~~vi~~~S~SK~~g 281 (483)
|++++||||||.+++.+++.+|+++| ++|+++|+||+|.++.+.+ .. .+...... .. +++++++||||.+|
T Consensus 145 v~l~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~-~~-~~~~~~~~-----~~~~~~i~~~s~sK~~g 216 (354)
T 3ly1_A 145 VYLVNPNNPTGTITPADVIEPWIASK-PANTMFIVDEAYAEFVNDP-RF-RSISPMIT-----QGAENIILLKTFSKIHA 216 (354)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCT-TC-CCSHHHHH-----TTCSSEEEEEESSSTTC
T ss_pred EEEeCCCCCcCCCcCHHHHHHHHHhC-CCCeEEEEeccHHHhcccc-cc-CCHHHHhh-----hcCCCEEEEeeChhhcc
Confidence 99999999999999999999999999 8999999999999876654 32 34344333 34 78999999999999
Q ss_pred CCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 282 FPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 282 ~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
++|+|+||+++ ++.+.+.+......+.++++.|.++.+++.+.. ++++.+++++++++++.+.|.++|+.+.++.
T Consensus 217 ~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 291 (354)
T 3ly1_A 217 MAGMRVGYAVA-HPTVIALMGRYVAGEKINFSGVDAALASMNDSA----FITYSKKSNDVSRQILLKALEDLKLPYLPSE 291 (354)
T ss_dssp CGGGCCEEEEC-CHHHHHHHGGGTTCSCCCHHHHHHHHHHTTCHH----HHHHHHHHHHHHHHHHHHHHHHHTCCBCCCC
T ss_pred Chhhhheeeec-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHHHCCCeECCCC
Confidence 99999999999 667777766665567789999999999998754 4677788889999999999988888887665
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
+ +|+|++++. + ..++...|. ++||.++ |..++ .++++||+++ +++++++++++|++++++
T Consensus 292 ~-~~~~~~~~~--~------~~~~~~~l~-~~gi~v~-g~~~~--~~~~iRis~~--~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 292 G-NFVFHQLVV--P------LKDYQTHMA-DAGVLIG-RAFPP--ADNWCRISLG--TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp S-SEEEEECSS--C------HHHHHHHHH-HTTEECC-CCCTT--CTTEEEEECC--CHHHHHHHHHHHHHHHHT
T ss_pred c-eEEEEECCC--C------HHHHHHHHH-HCCEEEe-ecCCC--CCCEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 4 689999975 1 236777776 4699999 77553 5789999997 789999999999998864
No 51
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.9e-43 Score=358.49 Aligned_cols=351 Identities=20% Similarity=0.341 Sum_probs=283.7
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|+|+.+++.++ ++.+.+++ +... .....|++..|..++|+++|++++..+| +++++++|++
T Consensus 43 ~~~i~l~~~~~~~~~~~~v~~a~-~~l~------------~~~~~y~~~~g~~~l~~~la~~~~~~~g--~~~~~~~v~~ 107 (409)
T 2gb3_A 43 VRIHHLNIGQPDLKTPEVFFERI-YENK------------PEVVYYSHSAGIWELREAFASYYKRRQR--VDVKPENVLV 107 (409)
T ss_dssp CEEEECSSCCCCSCCCTHHHHHH-HHTC------------CSSCCCCCTTCCHHHHHHHHHHHHHTSC--CCCCGGGEEE
T ss_pred CCEEeccCCCCCCCCCHHHHHHH-HHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCHHHEEE
Confidence 46789999988754 34455554 3111 0134688888899999999999998766 4567899999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++.+++++||+|+++.|+|+.+...++.. |.+++.++++++++|.+ ++.|++++.+ ++++|+
T Consensus 108 ~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~-~~~l~~~l~~------~~~~v~ 179 (409)
T 2gb3_A 108 TNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIA-GVKLIPVTRRMEEGFAI-PQNLESFINE------RTKGIV 179 (409)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHH-TCEEEEEECCGGGTSCC-CTTGGGGCCT------TEEEEE
T ss_pred eCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHc-CCEEEEeccCCCCCCcc-HHHHHHhhCc------CCeEEE
Confidence 999999999999999999999999999999999988876 99999999875456666 8888887753 789999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
+++|+||||.+++.+++++|+++|+++|++||+||+|.++.+++ . +.++ +.. ..+++++++|+||.+|++|
T Consensus 180 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~-~-~~~~--~~~-----~~~~~i~~~s~sK~~g~~G 250 (409)
T 2gb3_A 180 LSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRG-E-FASA--LSI-----ESDKVVVIDSVSKKFSACG 250 (409)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-C-CCCG--GGS-----CCTTEEEEEESTTTTTCGG
T ss_pred ECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCC-C-CCCc--ccc-----CCCCEEEEecchhccCCcc
Confidence 99999999999999999999999999999999999999876654 2 2333 211 1367899999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhhcC-CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcee-ecCCc
Q 011570 285 FRVGIIYSYNDQVVSCARKMSSFG-LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGC-LKSNA 362 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~-~~~~~ 362 (483)
+|+||++++++.+.+.+......+ .+++++|.++.++++.. ..++++.++.++++++++.+.|++.|+++ ..+.+
T Consensus 251 ~r~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 327 (409)
T 2gb3_A 251 ARVGCLITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLD---DSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSG 327 (409)
T ss_dssp GCCEEEECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCC---HHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSB
T ss_pred ceEEEEEECcHHHHHHHHHHHhccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHHcCceeeeCCCe
Confidence 999999996636666665544444 67889999988888653 34567778888999999999999889888 77888
Q ss_pred eEEEeeecCchhhccChHHHHHHHHHHHHh-----cCeEeeCCCCCCC---CCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 363 GLFLWMDLHHLLKEQTYEAEMALWRVIINE-----VKLNVSPGSSFHC---PNPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 363 g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~-----~gV~v~pg~~f~~---~~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
|+|+|++++. .+ ..+++..|+++ +||.+.||..|+. .+++++||+++ .+++++++++++|++++
T Consensus 328 ~~~~~~~~~~-~~------~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~-~~~e~i~~~~~~l~~~l 399 (409)
T 2gb3_A 328 AFYITAELPV-ED------AEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV-LEKDLLSRAIDVLMEGL 399 (409)
T ss_dssp SSEEEEECSS-SC------HHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC-SCHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCC-CC------HHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC-CCHHHHHHHHHHHHHHH
Confidence 9999999871 11 23678888876 6999999988864 23679999998 79999999999999999
Q ss_pred HHhhh
Q 011570 435 LKNVE 439 (483)
Q Consensus 435 ~~~~~ 439 (483)
++.+.
T Consensus 400 ~~~~~ 404 (409)
T 2gb3_A 400 KMFCS 404 (409)
T ss_dssp HHHHC
T ss_pred HHhhh
Confidence 87643
No 52
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=4.3e-43 Score=355.72 Aligned_cols=349 Identities=19% Similarity=0.309 Sum_probs=279.0
Q ss_pred Ccccccchhhhh---cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 47 GVIQMGLAENLL---CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 47 ~~i~l~~~~n~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
++|+|+.+.+.. +++.+.+++.+.... .......|++..|..+||++++++++ +++++|+
T Consensus 33 ~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~---------~~~~~~~y~~~~~~~~l~~~la~~~g--------~~~~~v~ 95 (397)
T 2zyj_A 33 GILSFAGGLPAPELFPKEEAAEAAARILRE---------KGEVALQYSPTEGYAPLRAFVAEWIG--------VRPEEVL 95 (397)
T ss_dssp TCEEESSCCCCGGGCCHHHHHHHHHHHHHH---------HHHHHTSCCCTTCCHHHHHHHHHHHT--------SCGGGEE
T ss_pred CceecCCCCCCchhCCHHHHHHHHHHHHHh---------cchhhhCCCCCCCCHHHHHHHHHHhC--------CChhhEE
Confidence 578887764322 445555555431000 00123578887899999999999985 4678999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.+++++||+|+++.|+|+.+...++.. |.+++.++.+++ .+|+++|++++++ .++++|
T Consensus 96 ~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~---~~d~~~l~~~l~~-----~~~~~v 166 (397)
T 2zyj_A 96 ITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQ-GPRFLTVPAGEE---GPDLDALEEVLKR-----ERPRFL 166 (397)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTT-CCEEEEEEEETT---EECHHHHHHHHHH-----CCCSCE
T ss_pred EeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHc-CCEEEecCcCCC---CCCHHHHHHHHhh-----cCCeEE
Confidence 9999999999999999999999999999999999988875 999999998753 3899999999875 267887
Q ss_pred -EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccC--CCeEEEEecCcccc
Q 011570 204 -LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACN--RNLIHIVYSLSKDM 280 (483)
Q Consensus 204 -~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~--~~~vi~~~S~SK~~ 280 (483)
++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++ ..+.++..+.. . .+++++++|+||.+
T Consensus 167 ~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~-----~~~~~~~i~~~s~sK~~ 240 (397)
T 2zyj_A 167 YLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGE-ARLPSLFELAR-----EAGYPGVIYLGSFSKVL 240 (397)
T ss_dssp EECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSS-CCCCCHHHHHH-----HHTCCCEEEEEESTTTT
T ss_pred EECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCC-CCCCchhhhCc-----ccCCCeEEEEecccccc
Confidence 578999999999999999999999999999999999999987765 44456666532 1 16789999999999
Q ss_pred CCCCceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC---Cc
Q 011570 281 GFPGFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV---GI 355 (483)
Q Consensus 281 g~~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~---gi 355 (483)
| +|+|+||++++ +.+.+.+..... .+.+++++|.++..++....+ +++++.++.++++++++.+.|++. |+
T Consensus 241 ~-~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~g~ 316 (397)
T 2zyj_A 241 S-PGLRVAFAVAH-PEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFS--ERLERVRRVYREKAQAMLHALDREVPKEV 316 (397)
T ss_dssp C-GGGCCEEEECC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHH--HHHHHHHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred c-ccceeEEEecC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHHCCCCe
Confidence 9 99999999994 666665544332 244688999999999987643 567888889999999999999875 78
Q ss_pred eeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC--CCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 356 GCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP--NPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 356 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~--~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
.+..+.+|+|+|++++...+ ..++++.|+++ ||.+.||..|+.. .++++||+++..+++++++++++|+++
T Consensus 317 ~~~~~~~g~~~~~~~~~~~~------~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~ 389 (397)
T 2zyj_A 317 RYTRPKGGMFVWMELPKGLS------AEGLFRRALEE-NVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRA 389 (397)
T ss_dssp EECCCSBSSEEEEECSTTCC------HHHHHHHHHHT-TEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHH
T ss_pred EEccCCccEEEEEEcCCCCC------HHHHHHHHHHC-CCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 88778889999999975322 23677888765 9999999988643 467999999866799999999999999
Q ss_pred HHHhh
Q 011570 434 MLKNV 438 (483)
Q Consensus 434 l~~~~ 438 (483)
+++..
T Consensus 390 l~~~~ 394 (397)
T 2zyj_A 390 LKGLL 394 (397)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87653
No 53
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=2.6e-43 Score=355.31 Aligned_cols=342 Identities=22% Similarity=0.338 Sum_probs=273.8
Q ss_pred Ccccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEe
Q 011570 47 GVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMS 125 (483)
Q Consensus 47 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it 125 (483)
++|+|+.++++++ ++.+.+++.+... ....|++..|..+||++++++++ +++++|++|
T Consensus 26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~-------------~~~~y~~~~~~~~l~~~la~~~~--------~~~~~v~~~ 84 (381)
T 1v2d_A 26 GAVNLGQGFPSNPPPPFLLEAVRRALG-------------RQDQYAPPAGLPALREALAEEFA--------VEPESVVVT 84 (381)
T ss_dssp TCEECCCCSCSSCCCHHHHHHHHHHTT-------------TSCSCCCTTCCHHHHHHHHHHHT--------SCGGGEEEE
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHH-------------HhcCCCCCCCCHHHHHHHHHhcC--------CChhhEEEc
Confidence 5789999988764 4555555544211 13468887789999999999976 567899999
Q ss_pred CChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecC--CCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 126 GGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCD--SSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 126 ~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~--~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+++++..++.+++++||+|+++.|+|+.+...++.. |.+++.++++ ++ ++.+|++.|++++.+ ++++|
T Consensus 85 ~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~-~~~~d~~~l~~~l~~------~~~~v 156 (381)
T 1v2d_A 85 SGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLA-GAKARLVRLDLTPE-GFRLDLSALEKALTP------RTRAL 156 (381)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECEEETT-EEECCHHHHHTTCCT------TEEEE
T ss_pred CChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHc-CCEEEEEeCCCCCc-cCCcCHHHHHHhcCc------CCEEE
Confidence 99999999999999999999999999999999888875 9999999986 22 478999999988742 78999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++|+||||.+++.+++++|+++|+++|++||+||+|.++.+ + ....++..+ . .++++++.|+||.+|++
T Consensus 157 ~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g-~~~~~~~~~-~------~~~~~~~~s~sK~~~~~ 227 (381)
T 1v2d_A 157 LLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-G-ERPRRLREF-A------PERTFTVGSAGKRLEAT 227 (381)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-S-SCCCCHHHH-C------TTTEEEEEEHHHHTTCG
T ss_pred EECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-C-CCCCCHHHh-c------CCCEEEEeechhhcCCc
Confidence 9999999999999999999999999999999999999998766 3 333455554 2 36889999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~ 361 (483)
|+|+||++++ +.+.+.+..... .+.++++.|.++..++....+ .+++++.+++++++++++.+.|++.|+++..+.
T Consensus 228 G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 305 (381)
T 1v2d_A 228 GYRVGWIVGP-KEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARR-EGFYEALREGYRRRRDLLAGGLRAMGLRVYVPE 305 (381)
T ss_dssp GGCCEEEECC-TTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCS
T ss_pred ccceEEEEeC-HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCccc-HHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCC
Confidence 9999999995 444554443332 355788899888888764321 345677888899999999999999999998888
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC--CCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhh
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC--PNPGWFRVCFANMDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~--~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
+|+|+|++++.. + ...+++++||.+.||..|+. ..++++||+++. +++++++++++|++++++.++
T Consensus 306 ~~~~~~~~~~~~----------~-~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~-~~~~i~~~~~~l~~~l~~~r~ 373 (381)
T 1v2d_A 306 GTYFLMAELPGW----------D-AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TEEELHLALERLGRVVNSPRE 373 (381)
T ss_dssp BSSEEEEECTTC----------C-HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-CHHHHHHHHHHHHHHC-----
T ss_pred cceEEEEecChH----------h-HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHhhccc
Confidence 899999999752 1 34456678999999998864 246799999986 999999999999999877654
Q ss_pred c
Q 011570 440 A 440 (483)
Q Consensus 440 ~ 440 (483)
.
T Consensus 374 ~ 374 (381)
T 1v2d_A 374 A 374 (381)
T ss_dssp -
T ss_pred c
Confidence 3
No 54
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=1.5e-43 Score=361.90 Aligned_cols=346 Identities=14% Similarity=0.182 Sum_probs=271.3
Q ss_pred CCcccccch---hhhhc---HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 46 NGVIQMGLA---ENLLC---HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 46 ~~~i~l~~~---~n~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
.++|||+.+ ++... ++.+.+++.+... . .....|++..|.++||+++++++....+ ..+++
T Consensus 49 ~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~----------~-~~~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~ 115 (420)
T 4f4e_A 49 PTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVE----------A-GLPRGYLPIDGIAAYDASVQKLLLGDDS--PLIAA 115 (420)
T ss_dssp SSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHH----------T-CCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHHT
T ss_pred CCcEEeeeeeeECCCCCccCcHHHHHHHHHHhc----------c-CCCCCCCCCCCcHHHHHHHHHHhcCCCc--ccccc
Confidence 377999999 34332 2555555543110 0 1245799889999999999999975433 22367
Q ss_pred C--cEEEeCChhHHHHHH--HHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 120 D--RIVMSGGATGAHETV--AFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 120 ~--~i~it~G~~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
+ +|++|+|+++++..+ +.+++++||+|++++|+|..+...++.. |.+++.+++.++.++.+|++.|++.+++.
T Consensus 116 ~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~~-- 192 (420)
T 4f4e_A 116 GRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMA-GFEVVAYPYYDAKTNGVNFDGMLAALNGY-- 192 (420)
T ss_dssp TCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHT-TCCEEEEECEETTTTEECHHHHHHHHTTC--
T ss_pred CceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHc-CCeEEEeeeeccccCccCHHHHHHHHHhC--
Confidence 8 999999999999999 4566899999999999999999988886 99999999844457889999999998632
Q ss_pred cCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEec
Q 011570 196 SNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYS 275 (483)
Q Consensus 196 ~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S 275 (483)
.++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.++.+....++..+.. ..+++++++|
T Consensus 193 -~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~S 266 (420)
T 4f4e_A 193 -EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAA-----ANLNVFVSSS 266 (420)
T ss_dssp -CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHH-----TTCCEEEEEE
T ss_pred -CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHh-----cCCCEEEEEe
Confidence 2367899999999999999999999999999999999999999999987764123345555543 4588999999
Q ss_pred CccccCCCCceEEEEEe--cChHHHHH----HHHh--hhcCCCChHHHHHHHHhcCChhH---HHHHHHHHHHHHHHHHH
Q 011570 276 LSKDMGFPGFRVGIIYS--YNDQVVSC----ARKM--SSFGLVSSQTQHLIATMLSDDQF---VEKFIAESAKRIAERHK 344 (483)
Q Consensus 276 ~SK~~g~~GlRiG~li~--~~~~l~~~----~~~~--~~~~~~s~~~q~~~~~~l~~~~~---~~~~~~~~~~~l~~~~~ 344 (483)
|||.||++|+|+||+++ +++.+.+. ++.. ..+..++.++|.+++.++.+... .++++++.+++++++++
T Consensus 267 ~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (420)
T 4f4e_A 267 FSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRN 346 (420)
T ss_dssp CTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999974 34443332 2221 22344678899999888887542 24667888999999999
Q ss_pred HHHHhhhcC----CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCH
Q 011570 345 AFTWGLSQV----GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDD 420 (483)
Q Consensus 345 ~l~~~L~~~----gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~ 420 (483)
++.+.|+++ |+.+..+++|+|+|+.++. +.+..+++++||.+.|+ .||+++..++
T Consensus 347 ~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~l~~~gI~v~~~----------~Ris~~~~~~ 405 (420)
T 4f4e_A 347 GLVERLKAAGIERDFSFINAQRGMFSYSGLTS-----------AQVDRLREEFGIYAVST----------GRICVAALNT 405 (420)
T ss_dssp HHHHHHHHTTCSSCCTHHHHSCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------SEEEGGGCCT
T ss_pred HHHHHHHhcCCCCCceeECCCccEEEEeCCCH-----------HHHHHHHHhCCEEecCC----------CeEEEecCCH
Confidence 999999987 7888889999999988752 34556677789999985 2999986688
Q ss_pred HHHHHHHHHHHHHH
Q 011570 421 RTMEIALSRITSFM 434 (483)
Q Consensus 421 e~l~~~l~~L~~~l 434 (483)
+++++++++|++++
T Consensus 406 ~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 406 RNLDVVANAIAAVL 419 (420)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 88999999999875
No 55
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=1.2e-43 Score=360.17 Aligned_cols=344 Identities=16% Similarity=0.156 Sum_probs=268.2
Q ss_pred Ccccccchhh-hh-c-H---HHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 47 GVIQMGLAEN-LL-C-H---ELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 47 ~~i~l~~~~n-~~-~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
++|+|+.+.+ .. + + +.+.+++..... ......|++..|.+++|+++|++++..+| ..++++
T Consensus 29 ~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~-----------~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~ 95 (401)
T 7aat_A 29 KKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAA-----------KKMDKEYLPIAGLADFTRASAELALGENS--EAFKSG 95 (401)
T ss_dssp TCEECCCCSCCCTTSCCCCCHHHHHHHHHHHH-----------TTCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHHTT
T ss_pred CceeeeeeeEECCCCCEechHHHHHHHHHhcc-----------cccccCCCCCCCCHHHHHHHHHHhcCCCc--cccccC
Confidence 4689998874 22 2 1 234444433100 01345798888999999999999987666 446799
Q ss_pred cEEE--eCChhHHHHHHHHHhc---CCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 121 RIVM--SGGATGAHETVAFCLA---DPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 121 ~i~i--t~G~~~al~~~~~~l~---~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
+|++ |+|+++++.+++.++. +|||+|++++|+|..+...++.. |.+++.+|++++.++.+|++.+++.+++.
T Consensus 96 ~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-- 172 (401)
T 7aat_A 96 RYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDA-GLQLQAYRYYDPKTCSLDFTGAMEDISKI-- 172 (401)
T ss_dssp CEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHT-TCEEEEEECEETTTTEECHHHHHHHHTTS--
T ss_pred ceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHc-CCeeEeeeeeccccCccCHHHHHHHHHhC--
Confidence 9987 9999999998887664 99999999999999999999886 99999999865557899999988888641
Q ss_pred cCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCC--CcchHHHhhhhccccCCCeEEEE
Q 011570 196 SNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKES--SFVSIAEIIDQDIACNRNLIHIV 273 (483)
Q Consensus 196 ~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~--~~~s~~~l~~~~~~~~~~~vi~~ 273 (483)
.++++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+.+ . ...++..+.. ..++++++
T Consensus 173 -~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~-~~~~~~~~~~~~~-----~~~~~i~~ 245 (401)
T 7aat_A 173 -PEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGD-INRDAWALRHFIE-----QGIDVVLS 245 (401)
T ss_dssp -CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSC-HHHHTHHHHHHHH-----TTCCCEEE
T ss_pred -CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCC-ccccHHHHHHHHh-----cCCcEEEE
Confidence 2468899999999999999999999999999999999999999999876654 2 2234444333 45789999
Q ss_pred ecCccccCCCCceEEEEEe--cChH----HHHHHHHhh--hcCCCChHHHHHHHHhcCChhHH---HHHHHHHHHHHHHH
Q 011570 274 YSLSKDMGFPGFRVGIIYS--YNDQ----VVSCARKMS--SFGLVSSQTQHLIATMLSDDQFV---EKFIAESAKRIAER 342 (483)
Q Consensus 274 ~S~SK~~g~~GlRiG~li~--~~~~----l~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~l~~~ 342 (483)
+||||.||++|+|+||+++ .++. +...+.... ....++...|.+++.++.++.+. .+++++.+++++++
T Consensus 246 ~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 325 (401)
T 7aat_A 246 QSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISM 325 (401)
T ss_dssp EECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987 2333 333333322 22446677888888888775432 45577888899999
Q ss_pred HHHHHHhhhcCC----ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccC
Q 011570 343 HKAFTWGLSQVG----IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANM 418 (483)
Q Consensus 343 ~~~l~~~L~~~g----i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~ 418 (483)
++++.+.|.++| +++.+|++|+|+|++++. +++..+++++||.+.|+ +||+++..
T Consensus 326 r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ll~~~gi~v~~~----------~Ris~~~~ 384 (401)
T 7aat_A 326 RTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKP-----------EQVERLTKEFSIYMTKD----------GRISVAGV 384 (401)
T ss_dssp HHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------CEEEGGGC
T ss_pred HHHHHHHHHhcCCCCCCceecCCcceEEecCCCH-----------HHHHHHHHhCCEeccCC----------CeEEeccC
Confidence 999999999875 777789999999987752 44577778889999754 69999876
Q ss_pred CHHHHHHHHHHHHHHH
Q 011570 419 DDRTMEIALSRITSFM 434 (483)
Q Consensus 419 ~~e~l~~~l~~L~~~l 434 (483)
+++++++++++|++++
T Consensus 385 ~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 385 ASSNVGYLAHAIHQVT 400 (401)
T ss_dssp CTTTHHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHHHh
Confidence 7777999999998875
No 56
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=1.8e-42 Score=346.67 Aligned_cols=329 Identities=17% Similarity=0.255 Sum_probs=272.3
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|+|+.++|+++ ++.+.+++.+.. .....|++ .+..++|++++++++ +++++|++
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~-------------~~~~~y~~-~~~~~lr~~la~~~~--------~~~~~v~~ 89 (363)
T 3ffh_A 32 TKITKLSSNENPLGTSKKVAAIQANSS-------------VETEIYPD-GWASSLRKEVADFYQ--------LEEEELIF 89 (363)
T ss_dssp SCCEECSSCSCTTCCCHHHHHHHHTCB-------------SCCCBC-----CHHHHHHHHHHHT--------CCGGGEEE
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHHH-------------HHhhcCCC-cchHHHHHHHHHHhC--------CChhhEEE
Confidence 47899999999986 566777666521 23456764 578999999999987 57899999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
|+|+++++..++.+++++||+|+++.|+|..+...++.. |.+++.+++++ ++.+|++++++++.+ ++++|+
T Consensus 90 ~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~ 160 (363)
T 3ffh_A 90 TAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQNALIE-GAEVREIPLLQ--DGEHDLEGMLNAIDE------KTTIVW 160 (363)
T ss_dssp ESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHHHHHHH-TCEEEEEECCT--TSCCCHHHHHHHCCT------TEEEEE
T ss_pred eCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHHHHHHc-CCEEEEecCCC--CCCcCHHHHHHhccc------CCCEEE
Confidence 999999999999999999999999999999999988886 99999999875 578999999998853 789999
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG 284 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (483)
+++||||||.+++.+++.+|++.|++ |+++|+||+|.++.+ + .. .+...... ..+++++++||||.+|++|
T Consensus 161 ~~~p~nptG~~~~~~~l~~l~~~~~~-~~~li~De~~~~~~~-~-~~-~~~~~~~~-----~~~~~i~~~s~sK~~g~~G 231 (363)
T 3ffh_A 161 ICNPNNPTGNYIELADIQAFLDRVPS-DVLVVLDEAYIEYVT-P-QP-EKHEKLVR-----TYKNLIITRTFSKIYGLAS 231 (363)
T ss_dssp EESSCTTTCCCCCHHHHHHHHTTSCT-TSEEEEECTTGGGCS-S-CC-CCCGGGGG-----TCTTEEEEEESSSTTCCSS
T ss_pred EeCCCCCcCCCcCHHHHHHHHHhCCC-CcEEEEeCchHhhcC-c-cc-cCHHHHhh-----cCCCEEEEeechhhhcCch
Confidence 99999999999999999999998887 999999999998766 3 22 23333332 4578999999999999999
Q ss_pred ceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc-CCceeecCCce
Q 011570 285 FRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ-VGIGCLKSNAG 363 (483)
Q Consensus 285 lRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~gi~~~~~~~g 363 (483)
+|+||+++ ++.+.+.+......+.+++++|.++..++.+.+ ++++.+++++++++++.+.|++ .|+++.++.+
T Consensus 232 ~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~- 305 (363)
T 3ffh_A 232 ARVGYGIA-DKEIIRQLNIVRPPFNTTSIGQKLAIEAIKDQA----FIGECRTSNANGIKQYEAFAKRFEKVKLYPANG- 305 (363)
T ss_dssp CCCEEEEE-CHHHHHHHHHTCCSCCCBHHHHHHHHHHHHCHH----HHHHHHHHHHHHHHHHHHHHHHCTTCEECCCCS-
T ss_pred hceeeeec-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHhhCCCceECCCCC-
Confidence 99999999 677777776666566789999999999987653 4677788889999999999998 6998877665
Q ss_pred EEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 364 LFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 364 ~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
+|+|++++. + ..++.+.|.+ +||.+++|..|+. ++++||+++ +++++++++++|+++
T Consensus 306 ~~~~~~~~~--~------~~~~~~~l~~-~gi~v~~g~~~~~--~~~iRis~~--~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 306 NFVLIDLGI--E------AGTIFSYLEK-NGYITRSGAALGF--PTAVRITIG--KEEDNSAVIALLEKL 362 (363)
T ss_dssp SEEEEECSS--C------HHHHHHHHHH-TTEECEETTTTTC--TTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred eEEEEECCC--C------HHHHHHHHHH-CCeEEEeCccCCC--CCeEEEECC--CHHHHHHHHHHHHHh
Confidence 589999974 1 2367777775 6999999998864 679999998 899999999999875
No 57
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=6.2e-43 Score=354.24 Aligned_cols=345 Identities=16% Similarity=0.185 Sum_probs=269.7
Q ss_pred CCcccccchh---hhhc-H--HHHHHHHhc-CCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcC
Q 011570 46 NGVIQMGLAE---NLLC-H--ELVEDWLMN-NPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFD 118 (483)
Q Consensus 46 ~~~i~l~~~~---n~~~-~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~ 118 (483)
.++|+|+.+. +..+ + +.+.+++.+ .... .....|++..|..++|+++++++....+ ..++
T Consensus 26 ~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~-----------~~~~~y~~~~g~~~lr~~la~~~~~~~~--~~~~ 92 (397)
T 3fsl_A 26 SDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQP-----------HGASLYLPMEGLNCYRHAIAPLLFGADH--PVLK 92 (397)
T ss_dssp SCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSC-----------CCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHH
T ss_pred CCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCc-----------cccccCCCCCchHHHHHHHHHHHhcCCc--cccc
Confidence 4689999993 3332 2 455554433 1110 1235798888999999999999985433 2236
Q ss_pred CC--cEEEeCChhHHHHHHH--HHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 119 PD--RIVMSGGATGAHETVA--FCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 119 ~~--~i~it~G~~~al~~~~--~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
++ +|++|+|+++++..++ .+++++||+|+++.|+|..+...++.. |.+++.+++.++.++.+|++.|++++++.
T Consensus 93 ~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~- 170 (397)
T 3fsl_A 93 QQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGA-GFEVSTYPWYDEATNGVRFNDLLATLKTL- 170 (397)
T ss_dssp TTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHT-TCCEEEECCEETTTTEECHHHHHHHHTTC-
T ss_pred ccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHc-CCceEEEeeeeccCCcCcHHHHHHHHHhC-
Confidence 88 9999999999999995 456799999999999999999988886 99999999854457889999999998632
Q ss_pred hcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEe
Q 011570 195 ESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVY 274 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~ 274 (483)
.++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.++......++..+.. ..+++++++
T Consensus 171 --~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~ 243 (397)
T 3fsl_A 171 --QAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIAS-----AGLPALVSN 243 (397)
T ss_dssp --CTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHH-----TTCCEEEEE
T ss_pred --CCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHh-----cCCCEEEEe
Confidence 2367889999999999999999999999999999999999999999987663123345555543 458899999
Q ss_pred cCccccCCCCceEEEEEe--cChHHHH-HHHHh-----hhcCCCChHHHHHHHHhcCChhH---HHHHHHHHHHHHHHHH
Q 011570 275 SLSKDMGFPGFRVGIIYS--YNDQVVS-CARKM-----SSFGLVSSQTQHLIATMLSDDQF---VEKFIAESAKRIAERH 343 (483)
Q Consensus 275 S~SK~~g~~GlRiG~li~--~~~~l~~-~~~~~-----~~~~~~s~~~q~~~~~~l~~~~~---~~~~~~~~~~~l~~~~ 343 (483)
||||.+|++|+|+||+++ .+..+.. ..... ..+..++.++|.+++.++.+... ..+++++.++++++++
T Consensus 244 S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 323 (397)
T 3fsl_A 244 SFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMR 323 (397)
T ss_dssp ECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999986 3444333 22222 23344578899999988887542 1456788889999999
Q ss_pred HHHHHhhhcC----CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCC
Q 011570 344 KAFTWGLSQV----GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMD 419 (483)
Q Consensus 344 ~~l~~~L~~~----gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~ 419 (483)
+++.+.|+++ |+.+..+++|+|+|++++. +....+++++||.+.||. ||+++..+
T Consensus 324 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gi~v~~g~----------Ris~~~~~ 382 (397)
T 3fsl_A 324 QELVKVLSTEMPERNFDYLLNQRGMFSYTGLSA-----------AQVDRLREEFGVYLIASG----------RMCVAGLN 382 (397)
T ss_dssp HHHHHHHHHHCTTSCCTHHHHCCSSEEECCCCH-----------HHHHHHHHTTCEECCTTC----------EEEGGGCC
T ss_pred HHHHHHHHhcCCCCCceeecCCceEEEecCCCH-----------HHHHHHHHhCCEEECCCC----------eEEEEecC
Confidence 9999999887 6888888999999988752 335566778899999873 99998667
Q ss_pred HHHHHHHHHHHHHH
Q 011570 420 DRTMEIALSRITSF 433 (483)
Q Consensus 420 ~e~l~~~l~~L~~~ 433 (483)
++++++++++|+++
T Consensus 383 ~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 383 TANVQRVAKAFAAV 396 (397)
T ss_dssp TTTHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHhh
Confidence 78899999999875
No 58
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=1.8e-43 Score=358.98 Aligned_cols=349 Identities=21% Similarity=0.300 Sum_probs=263.9
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|+|+.+++.++ ++.+.+++.+.... .........|++..|..+||+++|+++. +| + +++++|++
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-------~~~~~~~~~y~~~~g~~~lr~~la~~l~--~g--~-~~~~~v~~ 100 (400)
T 3asa_A 33 HTVINLSIGDTTQPLNASVAEAFASSIAR-------LSSPTTCRGYGPDFGLPALRQKLSEDFY--RG--F-VDAKEIFI 100 (400)
T ss_dssp SCCEECSSCCCCCCCCHHHHHHHHHHHHH-------HTSSSCCCCCCCTTCCHHHHHHHHHTTS--TT--S-SCGGGEEE
T ss_pred CceEeccCCCCCCCCCHHHHHHHHHHHhc-------ccccccccCCCCCCCCHHHHHHHHHHHH--cC--C-CCHHHEEE
Confidence 46789999988654 44444444331000 0000124578877899999999999964 23 3 57899999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcE-EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQ-LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~-~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
|+|+++++..++. ++.+||+|+++.|+|+.+...++.. |.+ ++.+++++++++..|++.+ .++++|
T Consensus 101 ~~G~~~al~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~l~~~-----------~~~~~v 167 (400)
T 3asa_A 101 SDGAKVDLFRLLS-FFGPNQTVAIQDPSYPAYLDIARLT-GAKEIIALPCLQENAFFPEFPED-----------THIDIL 167 (400)
T ss_dssp ESCHHHHHHHHHH-HHCSSCEEEEEESCCHHHHHHHHHT-TCSEEEEEECCGGGTTCCCCCTT-----------CCCSEE
T ss_pred ccChHHHHHHHHH-HcCCCCEEEECCCCcHHHHHHHHHc-CCcceEecccchhcCcccChhhc-----------cCccEE
Confidence 9999999999765 4589999999999999999888875 998 9999987655666654321 268999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++||||||.+++.+++++|+++|+++|++||+||+|.++.+.+ ....++..+.. ..+++++++||||.+|++
T Consensus 168 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~-----~~~~~i~~~s~sK~~g~~ 241 (400)
T 3asa_A 168 CLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDP-SLPKSIFEIPD-----ARFCAIEINSFSKPLGFA 241 (400)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCT-TSCSSGGGSTT-----GGGTEEEEEECCGGGTTT
T ss_pred EEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCC-CCCCchhhCCC-----CCCceEEEecchhhcCCc
Confidence 999999999999999999999999999999999999999866554 32234444321 135789999999999999
Q ss_pred CceEEEEEecChH-------HHHHHHH--hhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 011570 284 GFRVGIIYSYNDQ-------VVSCARK--MSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVG 354 (483)
Q Consensus 284 GlRiG~li~~~~~-------l~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g 354 (483)
|+|+||++++++. +...... ...++.+++++|.++..++.+. ++++.++.++++++++.+.|++.|
T Consensus 242 GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~l~~~L~~~g 316 (400)
T 3asa_A 242 GIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL-----PQLEAIHYYRENSDLLRKALLATG 316 (400)
T ss_dssp TCCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT-----TTCHHHHHHHHHHHHHHHHHHHTT
T ss_pred chheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999999996554 3333322 2234468899999888887643 356677788899999999999889
Q ss_pred ceeecCCceEEEeee-cCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 355 IGCLKSNAGLFLWMD-LHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 355 i~~~~~~~g~f~~~~-l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
+++..+.+|+|+|++ ++...+. .+++..|++++||.+.||+.|+..+++++||++. .+++++++++++|+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~-~~~e~i~~~l~~l~~~ 389 (400)
T 3asa_A 317 FEVFGGEHAPYLWVKPTQANISD------RDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSL-GKREDILAACERLQMA 389 (400)
T ss_dssp CEEEECSSSSEEEEECCCTTCCT------TTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECC-SCHHHHHHHHHHHHC-
T ss_pred CeeeCCCCceEEEEeccCCCCCH------HHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEee-CCHHHHHHHHHHHHHH
Confidence 998888888999999 7753222 2567778877899999999887555689999964 5899999999999988
Q ss_pred HHHh
Q 011570 434 MLKN 437 (483)
Q Consensus 434 l~~~ 437 (483)
+++.
T Consensus 390 ~~~~ 393 (400)
T 3asa_A 390 PALQ 393 (400)
T ss_dssp ----
T ss_pred HHhh
Confidence 7653
No 59
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=3.2e-42 Score=345.44 Aligned_cols=340 Identities=19% Similarity=0.267 Sum_probs=275.4
Q ss_pred CCCCCCCCCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCC
Q 011570 38 PYHPTKNPNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRIT 116 (483)
Q Consensus 38 ~~~~~~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~ 116 (483)
+|.+.. +.++|+|+.++|+++ ++.+.+++.+... . .....|++ .+..++|+++|++++ .+
T Consensus 23 ~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~----------~-~~~~~y~~-~~~~~l~~~la~~~g------~~ 83 (367)
T 3euc_A 23 AYHVPD-SHGLVKLDAMENPYRLPPALRSELAARLG----------E-VALNRYPV-PSSEALRAKLKEVMQ------VP 83 (367)
T ss_dssp CSSCCC-CTTCEECCSSCCCCCCCHHHHHHHHHHHH----------H-HHTTCSCC-CCHHHHHHHHHHHHT------CC
T ss_pred CCCCCC-CCCeeEccCCCCCCCCCHHHHHHHHHHhh----------h-hhhhcCCC-CcHHHHHHHHHHHhC------CC
Confidence 455544 567899999999885 4555555543100 0 13457876 478999999999986 21
Q ss_pred cCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 117 FDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 117 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
++++|++|+|+++++..++.+++++||+|+++.|+|..+...++.. |.+++.+++++ +|.+|++.|++++++.
T Consensus 84 -~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~l~~~--- 156 (367)
T 3euc_A 84 -AGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFA-GLEFVGVPLRA--DFTLDRGAMLAAMAEH--- 156 (367)
T ss_dssp -TTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSCHHHHTT-TCEEEEEECCT--TSCCCHHHHHHHHHHH---
T ss_pred -CcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHc-CCeEEEecCCC--CCCCCHHHHHHHhhcc---
Confidence 6789999999999999999999999999999999999999888876 99999999875 6789999999999753
Q ss_pred CCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc--CcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEe
Q 011570 197 NIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK--NIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVY 274 (483)
Q Consensus 197 ~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~--~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~ 274 (483)
++++|++++||||||.+++.+++++|+++|++| |+++|+||+|.++. . ....+ ... ..++++++.
T Consensus 157 --~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~--~-~~~~~---~~~-----~~~~~i~~~ 223 (367)
T 3euc_A 157 --QPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFA--Q-ESWMS---RLT-----DFGNLLVMR 223 (367)
T ss_dssp --CCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSS--S-CCSGG---GGG-----TCTTEEEEE
T ss_pred --CCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhc--c-cchHH---HHh-----hCCCEEEEe
Confidence 689999999999999999999999999999999 99999999999854 2 22222 112 357889999
Q ss_pred cCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-
Q 011570 275 SLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV- 353 (483)
Q Consensus 275 S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~- 353 (483)
||||. +++|+|+||+++ ++.+.+.+......+..++++|.++..++...+ ++++.+++++++++++.+.|+++
T Consensus 224 s~sK~-~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~l~~~~ 297 (367)
T 3euc_A 224 TVSKL-GLAGIRLGYVAG-DPQWLEQLDKVRPPYNVNVLTEATALFALEHVA----VLDEQAAQLRAERSRVAEGMAAHG 297 (367)
T ss_dssp ECCCT-TSCSCCEEEEEE-CHHHHHHHGGGCCSSCCCHHHHHHHHHHHTTHH----HHHHHHHHHHHHHHHHHHHHHTST
T ss_pred cchhh-cccccCceeeee-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999 899999999999 566666665555556689999999999998733 46777888899999999999988
Q ss_pred CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 354 GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 354 gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
|+++.++ +|+|+|++++. ..++.+.| .++||.+++|..|+...++++||+++ +++++++++++|+++
T Consensus 298 g~~~~~~-~~~~~~~~~~~---------~~~l~~~l-~~~gi~v~~~~~~~~~~~~~iRis~~--~~~~i~~~~~~l~~~ 364 (367)
T 3euc_A 298 GVTVFPS-AANFLLARVPD---------AAQTFDRL-LARKVLIKNVSKMHPLLANCLRVTVS--TPEENAQFLEAFAAS 364 (367)
T ss_dssp TCEECCC-SSSEEEEECSC---------HHHHHHHH-HTTTEECEECGGGCGGGTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred CcEECCC-CCeEEEEECCC---------HHHHHHHH-HHCCeEEEECCccCCCCCCEEEEecC--CHHHHHHHHHHHHHH
Confidence 8886554 55799999871 22566665 46799999999887656789999998 899999999999887
Q ss_pred HH
Q 011570 434 ML 435 (483)
Q Consensus 434 l~ 435 (483)
++
T Consensus 365 l~ 366 (367)
T 3euc_A 365 LQ 366 (367)
T ss_dssp TC
T ss_pred hc
Confidence 53
No 60
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=4.3e-42 Score=344.33 Aligned_cols=336 Identities=18% Similarity=0.269 Sum_probs=264.3
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
+.++|||+.++++++ ++.+.+++.+.. .....|++ .|..++|+++|++++ +++++|+
T Consensus 23 ~~~~idl~~~~~~~~~~~~v~~a~~~~~-------------~~~~~y~~-~~~~~l~~~la~~~~--------~~~~~v~ 80 (364)
T 1lc5_A 23 PDQLLDFSANINPLGMPVSVKRALIDNL-------------DCIERYPD-ADYFHLHQALARHHQ--------VPASWIL 80 (364)
T ss_dssp GGGSEECSSCCCTTCCCHHHHHHHHHTG-------------GGGGSCCC-TTCHHHHHHHHHHHT--------SCGGGEE
T ss_pred ccceEEeccccCCCCCCHHHHHHHHHHH-------------HHhhcCCC-CCHHHHHHHHHHHHC--------cCHHHEE
Confidence 456899999988764 455666655421 12457865 478999999999986 5678999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.++ +||+|+++.|+|+.+...++.. |.+++.++++++++|.+ ++++.+.+. .++++|
T Consensus 81 ~~~g~~~al~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~-l~~~~~~~~------~~~~~v 150 (364)
T 1lc5_A 81 AGNGETESIFTVASGL--KPRRAMIVTPGFAEYGRALAQS-GCEIRRWSLREADGWQL-TDAILEALT------PDLDCL 150 (364)
T ss_dssp EESSHHHHHHHHHHHH--CCSEEEEEESCCTHHHHHHHHT-TCEEEEEECCGGGTTCC-CTTHHHHCC------TTCCEE
T ss_pred ECCCHHHHHHHHHHHc--CCCeEEEeCCCcHHHHHHHHHc-CCeEEEEeCCcccccch-hHHHHHhcc------CCCCEE
Confidence 9999999999999998 7899999999999999988876 99999999875445554 454444332 367899
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++ .. ...+.. ..+++++++|+||.+|++
T Consensus 151 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~---~~~~~~-----~~~~~i~~~s~sK~~~~~ 221 (364)
T 1lc5_A 151 FLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHE-TG---FIPALK-----DNPHIWVLRSLTKFYAIP 221 (364)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTC-CC---SGGGCT-----TCTTEEEEEESTTTTTCT
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCc-cc---hhhHhc-----cCCCEEEEEECchhhcCC
Confidence 999999999999999999999999999999999999999865543 22 222222 347889999999999999
Q ss_pred CceEEEEE-ecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCC
Q 011570 284 GFRVGIIY-SYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSN 361 (483)
Q Consensus 284 GlRiG~li-~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~ 361 (483)
|+|+||++ + ++.+.+.+......+.+++++|.++.+++.... ++++.+++++++++++.+.|+++ |+++.++.
T Consensus 222 G~r~G~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 296 (364)
T 1lc5_A 222 GLRLGYLVNS-DDAAMARMRRQQMPWSVNALAALAGEVALQDSA----WQQATWHWLREEGARFYQALCQLPLLTVYPGR 296 (364)
T ss_dssp TTCCEEEECC-CHHHHHHHHHHSCTTCSCHHHHHHHHHGGGCHH----HHHHHHHHHHHHHHHHHHHHHTSTTEEECCCS
T ss_pred ccceEEEEEC-CHHHHHHHHHhCCCCCCCHHHHHHHHHHHhCcH----HHHHHHHHHHHHHHHHHHHHhcCCCCEECCCC
Confidence 99999999 6 666766666655556689999999999998743 46777888899999999999988 88877655
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhh
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
|+|+|++++.. . .++++.|+ ++||.+.||..|+...++++||+++ +++++++++++|++++++.+
T Consensus 297 -g~~~~~~~~~~--~------~~l~~~l~-~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~~~~ 361 (364)
T 1lc5_A 297 -ANYLLLRCERE--D------IDLQRRLL-TQRILIRSCANYPGLDSRYYRVAIR--SAAQNERLLAALRNVLTGIA 361 (364)
T ss_dssp -SSEEEEEESCT--T------CCHHHHHH-TTTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHC----
T ss_pred -CeEEEEECCCc--H------HHHHHHHH-HCCcEEeeCcccCCCCCCEEEEEeC--CHHHHHHHHHHHHHHhhccc
Confidence 46889988741 1 14666666 4599999999887555789999997 68889999999988876653
No 61
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=4.7e-43 Score=368.29 Aligned_cols=358 Identities=19% Similarity=0.287 Sum_probs=276.5
Q ss_pred CcccccchhhhhcHH-HHHHHHhcCCCCccccccccccccccccCC-CCCCcHHHHHHHHHHHHhhhCCCCCcC-CCcEE
Q 011570 47 GVIQMGLAENLLCHE-LVEDWLMNNPKASICSAEGLNEFKGIAIFQ-DYHGLPEFRNAVAKFMGKVRGNRITFD-PDRIV 123 (483)
Q Consensus 47 ~~i~l~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~Lr~~ia~~~~~~~g~~~~~~-~~~i~ 123 (483)
++++|+.+++..+++ .+.++.... .. ..|+ +..|.+++|+++++++...++.++.++ +++|+
T Consensus 104 ~~i~l~~g~~~~~~~~~v~a~~~~~--------------~~-~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~ 168 (533)
T 3f6t_A 104 DAVNYCHTELGLNRDKVVAEWVNGA--------------VA-NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLF 168 (533)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHH--------------HT-CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEE
T ss_pred hheeccCCCCCcCCcHHHHHHHHHH--------------Hh-CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEE
Confidence 467888888776643 334333321 11 2454 677999999999999965523102233 47999
Q ss_pred EeCChhHHHHHHHHH-----hcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC--CCCcccCHHHHHHHHHHHHhc
Q 011570 124 MSGGATGAHETVAFC-----LADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS--SNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 124 it~G~~~al~~~~~~-----l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~--~~~~~~d~~~l~~~i~~~~~~ 196 (483)
+|+|+++++..++.+ ++++||+|+++.|+|..+...+... |.+++.++++. +.+|.+|++.|++++.
T Consensus 169 ~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~~~d~~~l~~~l~----- 242 (533)
T 3f6t_A 169 PTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELK-DYELVEVDLHSYEKNDWEIEPNEIEKLKD----- 242 (533)
T ss_dssp EEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGG-GSEEEEECCCEETTTTSEECHHHHHHHSC-----
T ss_pred EECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHc-CCeEEEEEecCCcccCCCCCHHHHHHHhC-----
Confidence 999999999999998 7899999999999999998888875 99999998864 5678999999999875
Q ss_pred CCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHh-hcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEec
Q 011570 197 NIRIKGVLITNPSNPLGTFLDRETLKDIVSFIN-EKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYS 275 (483)
Q Consensus 197 ~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~-~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S 275 (483)
+++++|++++||||||.+++.+++++|+++|+ ++|++||+||+|.++.++. .++.... .+++++++|
T Consensus 243 -~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~----~~~~~~~-------~~~~i~~~S 310 (533)
T 3f6t_A 243 -PSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNF----KSIYSVV-------PYNTMLVYS 310 (533)
T ss_dssp -TTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTC----CCHHHHS-------GGGEEEEEE
T ss_pred -CCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCc----cCHhhcC-------CCCEEEEec
Confidence 37999999999999999999999999999999 6899999999999865532 3454442 378999999
Q ss_pred CccccCCCCceEEEEEecChHHHHHH------------------------------------HHhh--hcCCCChHHHHH
Q 011570 276 LSKDMGFPGFRVGIIYSYNDQVVSCA------------------------------------RKMS--SFGLVSSQTQHL 317 (483)
Q Consensus 276 ~SK~~g~~GlRiG~li~~~~~l~~~~------------------------------------~~~~--~~~~~s~~~q~~ 317 (483)
|||.+|++|+|+||++++++.+.+.+ .... .....+++.|.+
T Consensus 311 ~SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a 390 (533)
T 3f6t_A 311 YSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIM 390 (533)
T ss_dssp SHHHHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHH
T ss_pred CcccCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHH
Confidence 99999999999999999765322221 1111 123467788877
Q ss_pred ----HHHhcC-C---hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhcc-C--h-------
Q 011570 318 ----IATMLS-D---DQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQ-T--Y------- 379 (483)
Q Consensus 318 ----~~~~l~-~---~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~-~--~------- 379 (483)
+...+. + +.+ .+++++.++.++++++.+.+.|. .++.+..+.+|+|+|++++...... . +
T Consensus 391 ~a~~a~~~L~~~~g~~~~-~~~~~~~~~~~~~r~~~l~~~L~-~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~ 468 (533)
T 3f6t_A 391 EALFSMTHLLTSTNGGSD-DPYIDIARKLVSERYDQLHDAMQ-APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNN 468 (533)
T ss_dssp HHHHHHHHHTTCBGGGTB-CHHHHHHHHHHHHHHHHHHHHHT-CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccccch-HHHHHHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEEehHhhhhhccchHHHHHhhcc
Confidence 334453 1 122 45678889999999999999998 8888888999999999997532100 0 0
Q ss_pred HHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhhc
Q 011570 380 EAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 380 ~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
....+++..+++++||.+.||+.|+. .++++||+++..+++++++++++|++++++..++
T Consensus 469 ~~~~~~~~~ll~~~GV~v~pg~~f~~-~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~~ 528 (533)
T 3f6t_A 469 FEQVDFLLKLAEKNGVVLVDGVGFGA-KPGELRVSQANLPTEDYALIGKQVLELLKEYYEE 528 (533)
T ss_dssp CCHHHHHHHHHHHTTSSSCTTEEECS-STTEEEEESSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCEEEeCCcccCC-CCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 02346778888889999999999986 4679999998679999999999999999887643
No 62
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=8.5e-42 Score=349.10 Aligned_cols=327 Identities=17% Similarity=0.234 Sum_probs=259.7
Q ss_pred ccccC-CCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHH--HHHHHhcC--C---------CCeEEEeCC
Q 011570 86 GIAIF-QDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHE--TVAFCLAD--P---------GDAFLVPTP 151 (483)
Q Consensus 86 ~~~~Y-~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~--~~~~~l~~--~---------gd~Vlv~~P 151 (483)
....| ++..|.++||+++|++++ +++++|++|+|+++++. .++.+++. | ||+|+++.|
T Consensus 61 ~~~~Yp~~~~g~~~lr~~ia~~~~--------~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p 132 (423)
T 3ez1_A 61 DLRNYPGGVAGLPSARALFAGYLD--------VKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVP 132 (423)
T ss_dssp ETTSSCSCTTCCHHHHHHHHHHTT--------SCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEES
T ss_pred hhhCCCCCCCChHHHHHHHHHHhC--------CChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCC
Confidence 34689 888899999999999985 67899999999999998 88888887 8 599999999
Q ss_pred CCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEe-CCCCCCcCCCCHHHHHHHHHHH-h
Q 011570 152 YYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLIT-NPSNPLGTFLDRETLKDIVSFI-N 229 (483)
Q Consensus 152 ~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~-~P~NPtG~~~~~~~l~~i~~~a-~ 229 (483)
+|..+...++.. |.+++.+|++++ .+|++.|++++++ .+++++|+++ +||||||.+++.+++++|+++| +
T Consensus 133 ~y~~~~~~~~~~-g~~~~~v~~~~~---g~d~~~l~~~l~~----~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~ 204 (423)
T 3ez1_A 133 GYDRHFLLLQTL-GFELLTVDMQSD---GPDVDAVERLAGT----DPSVKGILFVPTYSNPGGETISLEKARRLAGLQAA 204 (423)
T ss_dssp CCHHHHHHHHHH-TCEEEEEEEETT---EECHHHHHHHHHS----CTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCS
T ss_pred CcHHHHHHHHHc-CCEEEeccCCCC---CCCHHHHHHHHhh----CCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHh
Confidence 999999998886 999999998764 3999999999852 2478888654 8999999999999999999999 9
Q ss_pred hcCcEEEEccccccCccCC-C-CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh-
Q 011570 230 EKNIHLVCDEIYAATVFTK-E-SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS- 306 (483)
Q Consensus 230 ~~~~~iI~Deay~~~~~~~-~-~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~- 306 (483)
++|++||+||+|..+.|.. . ..+.++.++.... ...+++++++||||. +++|+|+||+++ ++.+.+.+.....
T Consensus 205 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~S~sK~-~~~G~r~G~~~~-~~~~~~~~~~~~~~ 280 (423)
T 3ez1_A 205 APDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDA--GYPDRAFVFASTSKI-TFAGAGLGFVAS-SEDNIRWLSKYLGA 280 (423)
T ss_dssp STTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHH--TCTTSEEEEEESTTT-SCSSSSCEEEEE-CHHHHHHHHHHHHH
T ss_pred ccCCEEEEECCcchhhcCCCCCCCCcchhhhhhcc--CCCCeEEEEeCchhh-ccCCcceEEEEe-CHHHHHHHHHHHhh
Confidence 9999999999998655543 1 2334555542100 035789999999999 579999999999 5566666555443
Q ss_pred -cCCCChHHHHHHHHhcCC-hhHHHHHHHHHHHHHHHHHHHHHHhhhc----CC--ceeecCCceEEEeeecCchhhccC
Q 011570 307 -FGLVSSQTQHLIATMLSD-DQFVEKFIAESAKRIAERHKAFTWGLSQ----VG--IGCLKSNAGLFLWMDLHHLLKEQT 378 (483)
Q Consensus 307 -~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~g--i~~~~~~~g~f~~~~l~~~~~~~~ 378 (483)
.+.++++.|.++..++.+ .+.+.+++++.++.++++++.+.+.|.+ .| +.+..|.+|+|+|++++.. +
T Consensus 281 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~-~--- 356 (423)
T 3ez1_A 281 QSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEP-V--- 356 (423)
T ss_dssp SCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS-C---
T ss_pred hccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCC-c---
Confidence 245788999999888876 2334667778888888888777766654 55 7778889999999999853 1
Q ss_pred hHHHHHHHHHHHHhcCeEeeC-CCCCCC---CCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhhc
Q 011570 379 YEAEMALWRVIINEVKLNVSP-GSSFHC---PNPGWFRVCFANMDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 379 ~~~~~~~~~~Ll~~~gV~v~p-g~~f~~---~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
...+.. +++++||.++| |..|+. ..++++||+++..+++++++++++|++++++...+
T Consensus 357 ---~~~~~~-~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~~~ 418 (423)
T 3ez1_A 357 ---ADRVVK-LAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVVAACIRLATEE 418 (423)
T ss_dssp ---HHHHHH-HHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHH-HHHHCCcEEecCcccccCCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 224444 45577999999 766753 24679999998569999999999999999887654
No 63
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=3.2e-42 Score=346.49 Aligned_cols=315 Identities=21% Similarity=0.320 Sum_probs=265.4
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCc
Q 011570 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGV 166 (483)
Q Consensus 87 ~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~ 166 (483)
...|++..|.++||+++|+++. .+++++|++|+|+++++..++.+++++||+|+++.|+|..+...+... |.
T Consensus 56 ~~~y~~~~g~~~l~~~la~~~~-------~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~-g~ 127 (375)
T 3op7_A 56 KLNYGWIEGSPAFKKSVSQLYT-------GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSL-GA 127 (375)
T ss_dssp CCSSCCTTCCHHHHHHHHTTSS-------SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHHHHT-TC
T ss_pred CcCCCCCCChHHHHHHHHHHhc-------cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHc-CC
Confidence 3578888999999999999874 157899999999999999999999999999999999999999888876 99
Q ss_pred EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCcc
Q 011570 167 QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVF 246 (483)
Q Consensus 167 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~ 246 (483)
+++.++++.+++|.+|++.|++++++ ++++|++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+
T Consensus 128 ~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~ 201 (375)
T 3op7_A 128 EVDLWQIEEENGWLPDLEKLRQLIRP------TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSE 201 (375)
T ss_dssp EEEEEEEEGGGTTEECHHHHHHHCCT------TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSS
T ss_pred EEEEEeccccCCCCCCHHHHHHhhcc------CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccc
Confidence 99999998777889999999998853 789999999999999999999999999999999999999999998654
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCC
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSD 324 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~ 324 (483)
. ...++.+. .+++++++||||.+|++|+|+||+++ ++.+.+.+...... ...+++.+.++..++..
T Consensus 202 ~---~~~~~~~~--------~~~~i~~~s~sK~~~~~G~r~G~v~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (375)
T 3op7_A 202 L---DVPSIIEV--------YDKGIAVNSLSKTYSLPGIRIGWVAA-NHQVTDILRDYRDYTMICAGVFDDLVAQLALAH 269 (375)
T ss_dssp S---CCCCHHHH--------CTTEEEEEESSSSSSCGGGCCEEEEC-CHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHT
T ss_pred c---CCCchhhh--------cCCEEEEeEChhhcCCcccceEEEEe-CHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhc
Confidence 4 22344333 36789999999999999999999999 67777776554443 34577888887777764
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCC
Q 011570 325 DQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSF 403 (483)
Q Consensus 325 ~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f 403 (483)
.++++++.++.++++++.+.+.|++. ++.+..+.+++++|+.++...+ ..+++..+++++||.+.||..|
T Consensus 270 ---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ll~~~gi~v~~g~~~ 340 (375)
T 3op7_A 270 ---YQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDMP------MEDFCLQLLQEHGVLLVPGNRF 340 (375)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSSC------HHHHHHHHHHHHCEECEEGGGG
T ss_pred ---cHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCCC------HHHHHHHHHHhCCEEEeChhhh
Confidence 24567788888899999999999886 7888888898899988875322 3377888887889999999988
Q ss_pred CCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhh
Q 011570 404 HCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 404 ~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
+. ++++||+++. +++++++++++|++++++..+
T Consensus 341 ~~--~~~iRi~~~~-~~~~i~~~l~~l~~~l~~~~~ 373 (375)
T 3op7_A 341 ER--DGYVRLGFAC-EQETLIKGLEKLSQFLRRFDK 373 (375)
T ss_dssp TC--TTEEEECCCS-CHHHHHHHHHHHHHHHGGGC-
T ss_pred CC--CCeEEEEecC-CHHHHHHHHHHHHHHHHHHhh
Confidence 74 6899999984 668999999999999976643
No 64
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=2.1e-42 Score=352.12 Aligned_cols=344 Identities=15% Similarity=0.197 Sum_probs=266.0
Q ss_pred CCcccccchhh-hhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 46 NGVIQMGLAEN-LLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 46 ~~~i~l~~~~n-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
.++|+|+.+.+ ... ++.+.+.+.+.. ......|++..|.++||+++++++....+ .++++++|.
T Consensus 41 ~~~i~l~~g~~~d~~~~~~v~~a~~~a~------------~~~~~~y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~ 106 (409)
T 4eu1_A 41 KRKVNLSIGVYRDDADQPFVLECVKQAT------------LGTNMDYAPVTGIASFVEEAQKLCFGPTC--AALRDGRIA 106 (409)
T ss_dssp SSCEECCCSSCCCTTSCCCCCHHHHTCC------------CCSCCCCCCTTCCHHHHHHHHHHHHCSSC--HHHHTTCEE
T ss_pred cCceeeeeeEEECCCCCEeecHHHHhcC------------ccccccCCCCCCcHHHHHHHHHHHcCCCc--hhhccCcee
Confidence 46799999985 432 333444444321 12346798889999999999999853211 112378884
Q ss_pred --EeCChhHHHHHHH---HHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 124 --MSGGATGAHETVA---FCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 124 --it~G~~~al~~~~---~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
.|.|+++++..+. .+++++||.|++++|+|..+...++.. |.+++.++++++++|.+|++.|++++++. ..
T Consensus 107 ~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~ 182 (409)
T 4eu1_A 107 SCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKA-GMELTPYSYYDPATKGLNLAGMLECLDKA---PE 182 (409)
T ss_dssp EEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHT-TCEEEEECCEETTTTEECHHHHHHHHHHS---CT
T ss_pred eeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHc-CCeEEEEEeecCcCCcCcHHHHHHHHHhC---CC
Confidence 5999999988754 456789999999999999999999886 99999999865567899999999998742 12
Q ss_pred ceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCC--CcchHHHhhhhccccCCCeEEEEecC
Q 011570 199 RIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKES--SFVSIAEIIDQDIACNRNLIHIVYSL 276 (483)
Q Consensus 199 ~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~--~~~s~~~l~~~~~~~~~~~vi~~~S~ 276 (483)
+++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+.+ . ...++..+.. ..+++++++||
T Consensus 183 ~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~-~~~~~~~~~~~~~-----~~~~~i~~~S~ 256 (409)
T 4eu1_A 183 GSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQ-LDYDAFVPRHLVD-----MVPNLIVAQSF 256 (409)
T ss_dssp TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSC-HHHHTHHHHHHHT-----TSSCCEEEEEC
T ss_pred CcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCC-cccchHHHHHHHh-----hCCcEEEEecC
Confidence 45667779999999999999999999999999999999999999876653 1 1234444433 35788999999
Q ss_pred ccccCCCCceEEEE--EecChH----HHHHHHHhh--hcCCCChHHHHHHHHhcCChhHH---HHHHHHHHHHHHHHHHH
Q 011570 277 SKDMGFPGFRVGII--YSYNDQ----VVSCARKMS--SFGLVSSQTQHLIATMLSDDQFV---EKFIAESAKRIAERHKA 345 (483)
Q Consensus 277 SK~~g~~GlRiG~l--i~~~~~----l~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~l~~~~~~ 345 (483)
||+||++|+|+||+ ++.++. +.+.+.... ....+++++|.+++.++.+.... .+++++.++.+++++++
T Consensus 257 SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (409)
T 4eu1_A 257 SKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKR 336 (409)
T ss_dssp TTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997 665665 544444432 23456789999999999875422 34467788999999999
Q ss_pred HHHhhhcCC----ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHH
Q 011570 346 FTWGLSQVG----IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDR 421 (483)
Q Consensus 346 l~~~L~~~g----i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e 421 (483)
+.+.|++.| +++..+++|+|+|++++. +++..+++++||.+.|| .||+++..+++
T Consensus 337 l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ll~~~gv~v~p~----------~Ri~~~~~~~~ 395 (409)
T 4eu1_A 337 LVSELKACGSVHDWSHIERQVGMMAYTGLTR-----------EQVELLRSEYHIYMTLN----------GRAAVSGLNST 395 (409)
T ss_dssp HHHHHHHTTCCSCCHHHHHSCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------CEEEGGGCCTT
T ss_pred HHHHHHhcCCCCCcceecCCceEEEEeCCCH-----------HHHHHHHHcCCEEEcCC----------CEEEEEecCHh
Confidence 999999987 788889999999977652 45777888889999985 38999877888
Q ss_pred HHHHHHHHHHHHH
Q 011570 422 TMEIALSRITSFM 434 (483)
Q Consensus 422 ~l~~~l~~L~~~l 434 (483)
++++++++|++++
T Consensus 396 ~i~~~~~~l~~~l 408 (409)
T 4eu1_A 396 NVEYVSQAIHNVT 408 (409)
T ss_dssp THHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHh
Confidence 8999999998875
No 65
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=7.9e-46 Score=375.28 Aligned_cols=353 Identities=19% Similarity=0.254 Sum_probs=282.4
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++++|+.+++.++ ++.+.+++.+... .....|++. ..++|+++++++.+.+| +++++++|++
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~--~~~l~~~la~~l~~~~g--~~~~~~~v~~ 94 (392)
T 3b1d_A 31 PQLLPAWIADMDFEVMPEVKQAIHDYAE------------QLVYGYTYA--SDELLQAVLDWEKSEHQ--YSFDKEDIVF 94 (392)
Confidence 47899999988765 3444454433111 123567764 78999999999987766 4567899999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecC-CCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCD-SSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
|+|+++++..++.+++++||+|+++.|+|+.+...+... |.+++.++++ ++++|.+|++.|++++++ .++++|
T Consensus 95 ~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~g~~~~d~~~l~~~l~~-----~~~~~v 168 (392)
T 3b1d_A 95 VEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLN-NRKLVSNSLKEENGLFQIDFEQLENDIVE-----NDVKLY 168 (392)
Confidence 999999999999999999999999999999999888875 9999999985 334588999999998863 267899
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++ ..+.++..+... ..+++++++||||.+|++
T Consensus 169 ~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~----~~~~~i~~~s~sK~~~~~ 243 (392)
T 3b1d_A 169 LLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFG-HEHVSFNTVSPD----FKDFALVLSSATKTFNIA 243 (392)
Confidence 999999999999999999999999999999999999999987765 444555544320 147889999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhc---CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc-C-Cceee
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSF---GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ-V-GIGCL 358 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~-gi~~~ 358 (483)
|+|+||++++++.+.+.+...... ..+++++|.++.+++... .+++++.++.++++++.+.+.|++ + |+.+.
T Consensus 244 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 320 (392)
T 3b1d_A 244 GTKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYG---KPWLVALKAVLEENIQFAVEYFAQEAPRLKVM 320 (392)
Confidence 999999999655566655544332 246778888888888752 345777888899999999999987 4 88888
Q ss_pred cCCceEEEeeecCch-hhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 359 KSNAGLFLWMDLHHL-LKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 359 ~~~~g~f~~~~l~~~-~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
++.+++++|++++.. .+ ..++++.|++++||.+.||..|+...++++||+++. +++++++++++|+++++
T Consensus 321 ~~~~~~~~~i~~~~~~~~------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 321 KPQGTYLIWLDFSDYGLT------DDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA-PKSLVEEICKRIVCCLP 391 (392)
Confidence 999999999998742 11 236777777677999999999975567799999984 78899999999998775
No 66
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=1.9e-42 Score=352.97 Aligned_cols=356 Identities=18% Similarity=0.287 Sum_probs=263.5
Q ss_pred CCcccccchhhhhcH---HHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcE
Q 011570 46 NGVIQMGLAENLLCH---ELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRI 122 (483)
Q Consensus 46 ~~~i~l~~~~n~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i 122 (483)
.++|+|+.+.+...+ +.+.+++.+.... . ........|++..|.++||+++|+++.+.+| +.+++++|
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i 101 (417)
T 3g7q_A 31 PGAIMLGGGNPAHIPAMQDYFQTLLTDMVES------G-KAADALCNYDGPQGKTALLNALAVLLRETLG--WDIEPQNI 101 (417)
T ss_dssp -CCEECSCCCCCCCHHHHHHHHHHHHHHHHH------T-HHHHHHHSTTCTTSHHHHHHHHHHHHHHHHC--CCCCGGGE
T ss_pred CCceEecCcCCCCCChHHHHHHHHHHHHhhC------C-cccceeeccCCCCCcHHHHHHHHHHHHHHhC--CCCCcccE
Confidence 478999999877643 3344443321000 0 0001234799999999999999999988877 55789999
Q ss_pred EEeCChhHHHHHHHHHhcCCCC-----eEEEe-CCCCcChHHHHhhh-----cCcEEEEeecCCCCCcccCHHHHHHHHH
Q 011570 123 VMSGGATGAHETVAFCLADPGD-----AFLVP-TPYYPGFDRDLRWR-----TGVQLVPVVCDSSNDFKVTMEALEAAYE 191 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~~gd-----~Vlv~-~P~y~~~~~~~~~~-----~G~~~~~v~~~~~~~~~~d~~~l~~~i~ 191 (483)
++|+|+++++++++.+++++|| +|+++ .|+|+.+...+... .+..+..++.+. .+|.+|++.|+ +.
T Consensus 102 ~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~--~~ 178 (417)
T 3g7q_A 102 ALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQ-FKYHVDFEHLH--IG 178 (417)
T ss_dssp EEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGE-EEEECCGGGCC--CC
T ss_pred EEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcc-cccccCHHHhc--cc
Confidence 9999999999999999999987 89997 99999887664321 134555554321 24678998887 32
Q ss_pred HHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEE
Q 011570 192 KAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIH 271 (483)
Q Consensus 192 ~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi 271 (483)
+++++|++++||||||.+++.+++++|+++|++||++||+||+|+.+ +.. ..+.+.... ..++++
T Consensus 179 ------~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~-~~~-~~~~~~~~~-------~~~~~i 243 (417)
T 3g7q_A 179 ------EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVP-FPG-IIFSEARPL-------WNPNII 243 (417)
T ss_dssp ------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTT-TTC-CBCSCCCCC-------CCTTEE
T ss_pred ------cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccc-ccc-ccccccccC-------CCCCEE
Confidence 37899999999999999999999999999999999999999999753 221 111111100 247899
Q ss_pred EEecCccccCCCCceEEEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhHHHHHHHH-HHHHHHHHHHHHHH
Q 011570 272 IVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQFVEKFIAE-SAKRIAERHKAFTW 348 (483)
Q Consensus 272 ~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~-~~~~l~~~~~~l~~ 348 (483)
+++|||| ++++|+|+||+++ ++.+.+.+...... ..+++++|.++..++.+..+. ++..+ .++.++++++.+.+
T Consensus 244 ~~~s~sK-~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~ 320 (417)
T 3g7q_A 244 LCMSLSK-LGLPGSRCGIIIA-NDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLL-RLSETVIKPFYYQRVQQTIA 320 (417)
T ss_dssp EEEESGG-GTCTTSCCEEEEC-CHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHH-HHHHHTHHHHHHHHHHHHHH
T ss_pred EEEechh-ccCCCcceEEEEe-CHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchH-HHHHHHHHHHHHHHHHHHHH
Confidence 9999999 6889999999999 56666666554332 346889999999999887653 33343 67778888888888
Q ss_pred hhhcC----CceeecCCceEEEeeecCc-hhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCC-------CCEEEEEec
Q 011570 349 GLSQV----GIGCLKSNAGLFLWMDLHH-LLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPN-------PGWFRVCFA 416 (483)
Q Consensus 349 ~L~~~----gi~~~~~~~g~f~~~~l~~-~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~-------~~~iRis~~ 416 (483)
.|.+. |+.+..+.+|+|+|++++. ..+ ..+++..|. ++||.++||+.|+... ++++||+++
T Consensus 321 ~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~l~~~l~-~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~ 393 (417)
T 3g7q_A 321 IIRRYLSEERCLIHKPEGAIFLWLWFKDLPIT------TELLYQRLK-ARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYV 393 (417)
T ss_dssp HHHHHCCTTTCEEECCCBSSEEEEECTTCSSC------HHHHHHHHH-HTTEECEEGGGGCTTBSSCCGGGGGEEEEESC
T ss_pred HHHHhcccCCceeeCCCcceEEEEEcCCCCCC------HHHHHHHHH-HCCEEEECchhhCCCCccccccCCCeEEEEec
Confidence 77653 6888889999999999985 222 236677764 6799999999886543 569999998
Q ss_pred cCCHHHHHHHHHHHHHHHHHhhh
Q 011570 417 NMDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 417 ~~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
. +++++++++++|++++++..+
T Consensus 394 ~-~~~~i~~~~~~l~~~l~~~~~ 415 (417)
T 3g7q_A 394 P-EPDKIEAGVKILAEEIERAWR 415 (417)
T ss_dssp S-CHHHHHHHHHHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHHHHHHHHh
Confidence 5 999999999999999987654
No 67
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=1.6e-43 Score=362.10 Aligned_cols=356 Identities=14% Similarity=0.175 Sum_probs=273.7
Q ss_pred cCCCCCCCccchhhhhhh------cC-----CCCCCCCCCCcccccchhhhhcH-HHHHHHHhcCCCCcccccccccccc
Q 011570 18 GNGHGEDSPYFDGWKAFE------SD-----PYHPTKNPNGVIQMGLAENLLCH-ELVEDWLMNNPKASICSAEGLNEFK 85 (483)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~------~~-----~~~~~~~~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (483)
..|||. +||.+| .+. .+ +|++..++.++|+|+.++|++++ +.+.+++.+... ..+ .
T Consensus 20 ~~~~g~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~l~-----~~~----~ 87 (427)
T 2hox_A 20 CSEHGR--AFLDGI-ISEGSPKCECNTCYTGPDCSEKIQGCSADVASGDGLFLEEYWKQHKEASAVL-----VSP----W 87 (427)
T ss_dssp CGGGEE--CCTTSC-EETTEECCEECTTEESTTSCEECTTCCEECCSCCCGGGHHHHTTSHHHHCEE-----ECT----T
T ss_pred cCcCCc--eeeccc-cccCCcccccccccCCCCCcccCCCceEEecCcCCCCCCCHHHHHhHHhhhh-----cCC----c
Confidence 456777 788887 444 34 78888889999999999998764 334444432110 000 1
Q ss_pred ccccCCCCC-C---cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh--------cCCCCeEEEeCCCC
Q 011570 86 GIAIFQDYH-G---LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL--------ADPGDAFLVPTPYY 153 (483)
Q Consensus 86 ~~~~Y~~~~-g---~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l--------~~~gd~Vlv~~P~y 153 (483)
....|++.. | .++||++||+|++...+ ..+++++|++|+|+++++.+++.+| ++|||.|+++.|+|
T Consensus 88 ~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~--~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y 165 (427)
T 2hox_A 88 HRMSYFFNPVSNFISFELEKTIKELHEVVGN--AAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFY 165 (427)
T ss_dssp TTCSSSCSSCCTTCCHHHHHHHHHHHHHHTC--BCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCC
T ss_pred ccccCCCCCCCccchHHHHHHHHHHHHHhCC--cCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCc
Confidence 123498888 8 99999999999997544 4468899999999999999999999 99999999999999
Q ss_pred cChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCc
Q 011570 154 PGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNI 233 (483)
Q Consensus 154 ~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~ 233 (483)
+.|...++.. |.+++. |.+|++.|++++.+ ++++|+++|||||||.+++ +.+ + ++
T Consensus 166 ~~~~~~~~~~-g~~~~~--------~~~d~~~l~~~~~~------~~k~v~l~~p~NPtG~~~~-~~l-------~--~~ 220 (427)
T 2hox_A 166 PVFREQTKYF-DKKGYV--------WAGNAANYVNVSNP------EQYIEMVTSPNNPEGLLRH-AVI-------K--GC 220 (427)
T ss_dssp HHHHHHHHHS-CBTTEE--------EEEEGGGGTTCSCG------GGEEEEEESSCTTTCCCCC-CSS-------T--TC
T ss_pred ccHHHHHHHc-CCeeee--------ecCCHHHHHHhhcC------CceEEEEcCCCCCcccccH-HHH-------c--CC
Confidence 9999998886 888764 34677778776643 6899999999999999999 422 2 45
Q ss_pred EEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc--CCCC
Q 011570 234 HLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF--GLVS 311 (483)
Q Consensus 234 ~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~--~~~s 311 (483)
.+|.|++|. .. . .++..+ ..+++|+++||||.+|++|+|+||++++++.+.+.+...... ..++
T Consensus 221 ~~i~d~~~~----~~-~--~s~~~~-------~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~~~~~~~~~ 286 (427)
T 2hox_A 221 KSIYDMVYY----WP-H--YTPIKY-------KADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTEGTP 286 (427)
T ss_dssp EEEEECTTC----ST-T--TSCCCS-------CBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHHHHHTSSCC
T ss_pred CEEEeeccc----CC-C--CCcccc-------CCCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHHHhcCCCCC
Confidence 677777763 22 1 232222 137899999999999999999999999657777776665543 5688
Q ss_pred hHHHHHHHHhcCCh-hHH-------HHHHHHHHHHHHHHHHHHHHhhhcC-Ccee--------------ecCCceEEEee
Q 011570 312 SQTQHLIATMLSDD-QFV-------EKFIAESAKRIAERHKAFTWGLSQV-GIGC--------------LKSNAGLFLWM 368 (483)
Q Consensus 312 ~~~q~~~~~~l~~~-~~~-------~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~--------------~~~~~g~f~~~ 368 (483)
+++|.++..+|.+. +++ ++++++.++.++++++++.+.|++. |+.+ ..|++|+|+|+
T Consensus 287 ~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~ 366 (427)
T 2hox_A 287 RETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWV 366 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEE
T ss_pred HHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEE
Confidence 99999998888753 222 3567788899999999999999987 6654 35667999999
Q ss_pred ecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 369 DLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 369 ~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
+++. +. .+++..+++++||.|+||+.|+. +++++|||++. +++++++++++|++++++
T Consensus 367 ~~~~--~~------~~~~~~ll~~~gI~v~pg~~f~~-~~~~~Ris~~~-~~e~l~~~l~~l~~~~~~ 424 (427)
T 2hox_A 367 KCEW--EE------DKDCYQTFQNGRINTQNGVGFEA-SSRYVRLSLIK-TQDDFDQLMYYLKDMVKA 424 (427)
T ss_dssp EECS--GG------GCSHHHHHHHTTEECEEGGGGTS-CTTEEEEECSS-CHHHHHHHHHHHHHHHTC
T ss_pred ECCC--cH------HHHHHHHHHHCCEEEcCCCccCC-CCCEEEEEecC-CHHHHHHHHHHHHHHHhh
Confidence 9975 11 25677788788999999999976 67899999984 889999999999998754
No 68
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=3.9e-41 Score=336.52 Aligned_cols=333 Identities=18% Similarity=0.289 Sum_probs=266.0
Q ss_pred CCCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcE
Q 011570 44 NPNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRI 122 (483)
Q Consensus 44 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i 122 (483)
++.++|||+.++|+++ ++.+.+++.+. +.....|+. .+..++|+++|++++ +++++|
T Consensus 24 ~~~~~idl~~~~~~~~~~~~v~~a~~~~-------------~~~~~~y~~-~~~~~l~~~la~~~~--------~~~~~i 81 (361)
T 3ftb_A 24 KGRELLDYSSNINPLGIPKSFLNNIDEG-------------IKNLGVYPD-VNYRRLNKSIENYLK--------LKDIGI 81 (361)
T ss_dssp ----CEETTCCCCTTCSCHHHHTTHHHH-------------HHGGGSCCC-TTCHHHHHHHHHHHT--------CCSCEE
T ss_pred CCCCEEEecCCCCCCCCCHHHHHHHHHH-------------HHHhcCCCC-ccHHHHHHHHHHHhC--------CCcceE
Confidence 4567899999999885 44454444331 112356754 578999999999986 578999
Q ss_pred EEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 123 VMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
++|+|+++++..++.++ |+|+++.|+|..+...++.. |.+++.+++++++ .+++++++++++ . +++
T Consensus 82 ~~~~g~t~al~~~~~~~----d~vi~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~--~~~~~~l~~~l~------~-~~~ 147 (361)
T 3ftb_A 82 VLGNGASEIIELSISLF----EKILIIVPSYAEYEINAKKH-GVSVVFSYLDENM--CIDYEDIISKID------D-VDS 147 (361)
T ss_dssp EEESSHHHHHHHHHTTC----SEEEEEESCCTHHHHHHHHT-TCEEEEEECCTTS--CCCHHHHHHHTT------T-CSE
T ss_pred EEcCCHHHHHHHHHHHc----CcEEEecCChHHHHHHHHHc-CCeEEEeecCccc--CCCHHHHHHhcc------C-CCE
Confidence 99999999999999887 89999999999999988886 9999999988654 356688888774 2 789
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF 282 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~ 282 (483)
|++++||||||.+++.+++++|+++|++||+++|+||+|.++.++. . .+...... ..+++++++|+||.+|+
T Consensus 148 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~--~~~~~~~~-----~~~~~i~~~s~sK~~~~ 219 (361)
T 3ftb_A 148 VIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDP-S--SSFVGEIK-----NYSCLFIIRAMTKFFAM 219 (361)
T ss_dssp EEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCT-T--SSSGGGTT-----TCSSEEEEEESSSTTSC
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCc-c--cchhHhcc-----cCCCEEEEeeChhhcCC
Confidence 9999999999999999999999999999999999999999876541 1 23333322 35788999999999999
Q ss_pred CCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cce-eecC
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIG-CLKS 360 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~-~~~~ 360 (483)
+|+|+||++..++.+.+.+......+.+++++|.++.+++.+.+ ++++.+++++++++++.+.|+++ ++. +.++
T Consensus 220 ~G~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 295 (361)
T 3ftb_A 220 PGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAINCLKDTN----YIEESLLWIKKERKRFIEELNKIGFIKRVFSP 295 (361)
T ss_dssp GGGCCEEEEESCHHHHHHHHTTSCTTCSCHHHHHHHHHTSSCHH----HHHHHHHHHHHHHHHHHHHHHHSSSEEEEECC
T ss_pred CCcceeEEEeCCHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHHhCCCCceecCC
Confidence 99999999954777777776665566789999999999998743 46777888899999999999988 788 6666
Q ss_pred CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 361 NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 361 ~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
.+ .|+|++++. .+ ..++.+.|.++ ||.++||..|+..+++++||+++ ++++++++++.|+++.+
T Consensus 296 ~~-~~~~~~~~~-~~------~~~l~~~l~~~-gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 296 HA-NFVLCRLEN-IS------GEKLYDSLLKE-DIVIRRCCNFIGLDDSFVRFAIK--DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp SS-SEEEEEESS-SC------HHHHHHHHHTT-TEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHH
T ss_pred CC-eEEEEEcCC-CC------HHHHHHHHHHC-CeEEeeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHh
Confidence 65 578898875 11 23677777755 99999999998666789999998 77778888888877654
No 69
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=2.3e-41 Score=334.92 Aligned_cols=323 Identities=16% Similarity=0.260 Sum_probs=252.2
Q ss_pred CCCCCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 42 TKNPNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 42 ~~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
..++.++|+|+.|+|+++ ++.+.+++.+. ......|++ .|..+||+++|++++ ++++
T Consensus 12 ~~~~~~~i~l~~n~~~~~~~~~v~~a~~~~-------------~~~~~~y~~-~~~~~lr~~la~~~~--------~~~~ 69 (337)
T 3p1t_A 12 VRAAAQAVCLAFNENPEAVEPRVQAAIAAA-------------AARINRYPF-DAEPRVMRKLAEHFS--------CPED 69 (337)
T ss_dssp --CCCCCEECSSCCCCSCCCHHHHHHHHHH-------------GGGTTSCCT-THHHHHHHHHHHHHT--------SCGG
T ss_pred ccCCCCceEeeCCCCCCCCCHHHHHHHHHh-------------hhhhccCCC-CchHHHHHHHHHHhC--------cCHH
Confidence 345667899999999986 45666666542 123467864 688999999999986 5788
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
+|++|+|+++++..++.++ +||+|+++.|+|..+...++.. |++++.+++++ +|.+|++.++++ .++
T Consensus 70 ~i~~t~G~~~~l~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~--------~~~ 136 (337)
T 3p1t_A 70 NLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVS-GLRHFEIGLTD--DLLLDPNDLAQV--------SRD 136 (337)
T ss_dssp GEEEESHHHHHHHHHHHHS--TTSEEEEESSSCSHHHHHHTTS-CCEEEEECBCT--TSSBCHHHHTTC--------CTT
T ss_pred HEEEeCCHHHHHHHHHHhc--CCCeEEEeCCCcHHHHHHHHHc-CCEEEEecCCC--CCCCCHHHHHhh--------cCC
Confidence 9999999999999999988 9999999999999999988876 99999999875 578999998765 257
Q ss_pred eEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCcccc
Q 011570 201 KGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDM 280 (483)
Q Consensus 201 ~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~ 280 (483)
++|++++||||||.+++.+++.+|+ ++++. +|+||+|.++.+.. .. . . . ..+++++++||||.+
T Consensus 137 ~~v~i~~p~nptG~~~~~~~l~~l~---~~~~~-~ivDea~~~~~~~~-~~--~---~-~-----~~~~~i~~~S~sK~~ 200 (337)
T 3p1t_A 137 DCVVLANPSNPTGQALSAGELDQLR---QRAGK-LLIDETYVDYSSFR-AR--G---L-A-----YGENELVFRSFSKSY 200 (337)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHH---HHCSE-EEEECTTGGGSSCS-SS--C---C-C-----CBTTEEEEEESSSTT
T ss_pred CEEEEeCCCCCCCCCCCHHHHHHHH---HhCCc-EEEECCChhhcccc-cc--c---c-c-----cCCCEEEEeeCchhc
Confidence 8999999999999999977766665 46676 56699998754332 11 1 0 1 236789999999999
Q ss_pred CCCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecC
Q 011570 281 GFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKS 360 (483)
Q Consensus 281 g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~ 360 (483)
|++|+|+||+++ ++.+.+.+......+.++.++|.++..++.+.++ ..+.++++.++++++.+.|+++|+++.++
T Consensus 201 g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 275 (337)
T 3p1t_A 201 GLAGLRLGALFG-PSELIAAMKRKQWFCNVGTLDLHALEAALDNDRA----REAHIAKTLAQRRRVADALRGLGYRVASS 275 (337)
T ss_dssp CCTTTCCEEEEC-CHHHHHHHHTTSCTTCSCHHHHHHHHHHHTCHHH----HHHHHHHHHHHHHHHHHHHHHTTCCBCCC
T ss_pred cCcchheEEEEe-CHHHHHHHHhhcCCCCCCHHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHHHHHHCcCEECCC
Confidence 999999999999 5666666665555566888999999999987554 33444556677888999999889988887
Q ss_pred CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 361 NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 361 ~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
.++ |+|+..+.. .++.. +++++||.++||..|+. ++++||+++ +++++++++++|+++.+
T Consensus 276 ~~~-~~~~~~~~~---------~~~~~-~l~~~gi~v~~g~~~~~--~~~iRis~~--~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 276 EAN-FVLVENAAG---------ERTLR-FLRERGIQVKDAGQFGL--HHHIRISIG--REEDNDRLLAALAEYSD 335 (337)
T ss_dssp SSS-EEEEECTTT---------HHHHH-HHHHTTEECEEGGGGTC--CSEEEEECC--CHHHHHHHHHHHHHHTC
T ss_pred CCe-EEEEEcCCH---------HHHHH-HHHHCCeEEEECccCCC--CCeEEEecC--CHHHHHHHHHHHHHHhh
Confidence 776 677776531 13344 45567999999998864 679999998 78999999999987653
No 70
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=1e-41 Score=347.26 Aligned_cols=349 Identities=18% Similarity=0.188 Sum_probs=271.5
Q ss_pred CCcccccchhh------hhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 46 NGVIQMGLAEN------LLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 46 ~~~i~l~~~~n------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
.++|+|+.+.+ +.+++.+.+++.+... .......|++..|..+||+++++++...++ +.+++
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~----------~~~~~~~y~~~~g~~~lr~~la~~~~~~~~--~~~~~ 97 (412)
T 1ajs_A 30 PRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIAN----------NSSLNHEYLPILGLAEFRTCASRLALGDDS--PALQE 97 (412)
T ss_dssp TTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHT----------CTTCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHHT
T ss_pred CCceeeccceecCCCCCccccHHHHHHHHHhhh----------ChhhccCCCCCCCCHHHHHHHHHHHhcCCC--CccCC
Confidence 46789999873 2234556666544210 001345788888999999999999965444 33578
Q ss_pred CcEEE--eCChhHHHHHHHH--HhcCCC-----CeEEEeCCCCcChHHHHhhhcCcE-EEEeecCCCCCcccCHHHHHHH
Q 011570 120 DRIVM--SGGATGAHETVAF--CLADPG-----DAFLVPTPYYPGFDRDLRWRTGVQ-LVPVVCDSSNDFKVTMEALEAA 189 (483)
Q Consensus 120 ~~i~i--t~G~~~al~~~~~--~l~~~g-----d~Vlv~~P~y~~~~~~~~~~~G~~-~~~v~~~~~~~~~~d~~~l~~~ 189 (483)
++|++ |+|+++++..++. .++++| |+|+++.|+|+.+...+... |.+ ++.++++++++|.+|++.++++
T Consensus 98 ~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~l~~~ 176 (412)
T 1ajs_A 98 KRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTA-GFKDIRSYRYWDTEKRGLDLQGFLSD 176 (412)
T ss_dssp TCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHT-TCSCEEEEECEETTTTEECHHHHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHc-CCceeEEEeeecCCCCccCHHHHHHH
Confidence 99999 9999999999964 456899 99999999999999988876 999 9999985445788999999999
Q ss_pred HHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC-CCcchHHHhhhhccccCCC
Q 011570 190 YEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE-SSFVSIAEIIDQDIACNRN 268 (483)
Q Consensus 190 i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~-~~~~s~~~l~~~~~~~~~~ 268 (483)
+.+. +.++++|++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ..+.++..+.. ..+
T Consensus 177 l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~-----~~~ 248 (412)
T 1ajs_A 177 LENA---PEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVS-----EGF 248 (412)
T ss_dssp HHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHH-----TTC
T ss_pred HHhC---CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhc-----cCC
Confidence 8752 23577888999999999999999999999999999999999999998655420 02235554433 357
Q ss_pred eEEEEecCccccCCCCceEEEEEe---cChH---HHHHHHH-hh-hcCCCChHHHHHHHHhcCChhHH---HHHHHHHHH
Q 011570 269 LIHIVYSLSKDMGFPGFRVGIIYS---YNDQ---VVSCARK-MS-SFGLVSSQTQHLIATMLSDDQFV---EKFIAESAK 337 (483)
Q Consensus 269 ~vi~~~S~SK~~g~~GlRiG~li~---~~~~---l~~~~~~-~~-~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~ 337 (483)
+++++.||||.+|++|+|+||+++ +++. +.+.+.. .. .+..+++++|.++.++|.+..+. .+++++.++
T Consensus 249 ~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 328 (412)
T 1ajs_A 249 ELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMAD 328 (412)
T ss_dssp CEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred cEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHH
Confidence 899999999999988999999998 4332 3333333 22 23335889999999999876421 346788889
Q ss_pred HHHHHHHHHHHhhhcCC----ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEE
Q 011570 338 RIAERHKAFTWGLSQVG----IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRV 413 (483)
Q Consensus 338 ~l~~~~~~l~~~L~~~g----i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRi 413 (483)
+++++++++.+.|++++ +++..+.+|+|+|++++. +++..+++++||.+.|+ +||
T Consensus 329 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gv~v~~~----------~Ri 387 (412)
T 1ajs_A 329 RILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNP-----------KQVEYLINQKHIYLLPS----------GRI 387 (412)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCCH-----------HHHHHHHHTTCEECCTT----------SEE
T ss_pred HHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCCH-----------HHHHHHHHhCCEEecCC----------cEE
Confidence 99999999999999886 787888999999987651 45666777889999874 599
Q ss_pred EeccCCHHHHHHHHHHHHHHHHH
Q 011570 414 CFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 414 s~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
+++..+++++++++++|++++++
T Consensus 388 s~~~~~~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 388 NMCGLTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp EGGGCCTTTHHHHHHHHHHHHHH
T ss_pred EeeeCCHHHHHHHHHHHHHHHHh
Confidence 99856899999999999998865
No 71
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=1.1e-41 Score=350.43 Aligned_cols=366 Identities=18% Similarity=0.268 Sum_probs=272.7
Q ss_pred CCcc-cccchhhhhcHHH---HHHHHhcCCCCccccccc---cccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcC
Q 011570 46 NGVI-QMGLAENLLCHEL---VEDWLMNNPKASICSAEG---LNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFD 118 (483)
Q Consensus 46 ~~~i-~l~~~~n~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~ 118 (483)
.++| +|+.+.+..+++. +.+++.+.... ..++ .........|++..|.++||+++|+|+.+.+| +.++
T Consensus 31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g--~~~~ 105 (444)
T 3if2_A 31 DQPVNMLGGGNPAKIDAVNELFLETYKALGND---NDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYD--WNLT 105 (444)
T ss_dssp SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSC---SCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHC--CCCC
T ss_pred chhhhccCCCCCCcccchHHHHHHHHHHHHhc---cccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcC--CCCC
Confidence 4679 9999987765433 33333321000 0000 00001235799999999999999999998887 5578
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCC--------------eEEEe-CCCCcChHHH------HhhhcCcEEEEeecCCC-
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGD--------------AFLVP-TPYYPGFDRD------LRWRTGVQLVPVVCDSS- 176 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd--------------~Vlv~-~P~y~~~~~~------~~~~~G~~~~~v~~~~~- 176 (483)
+++|++|+|+++++.+++.+++++|| .|+++ .|+|..+... +.. .|..+++++++++
T Consensus 106 ~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 184 (444)
T 3if2_A 106 SENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAA-VLPHIDEVTHDGEE 184 (444)
T ss_dssp GGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEE-CCCEEEEEEETTEE
T ss_pred HHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhc-cCceEEeccccccc
Confidence 99999999999999999999999998 78776 9999988763 233 3888888888752
Q ss_pred C--CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcch
Q 011570 177 N--DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVS 254 (483)
Q Consensus 177 ~--~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s 254 (483)
+ +|.+|++.|++++... .+++++|++++||||||.+++.+++++|+++|++||++||+||+|+.. +.. ..+.+
T Consensus 185 g~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~-~~~-~~~~~ 259 (444)
T 3if2_A 185 GFFKYRVDFEALENLPALK---EGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMP-FPN-IIYSD 259 (444)
T ss_dssp EEEEEECCHHHHHTCHHHH---TTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTT-TTC-CBCSC
T ss_pred CccccCCCHHHHHHHHHhc---CCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCc-ccc-ccccc
Confidence 2 4789999999885421 247899999999999999999999999999999999999999999753 221 11111
Q ss_pred HHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChhHHHHHH
Q 011570 255 IAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQFVEKFI 332 (483)
Q Consensus 255 ~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~ 332 (483)
... . ..+++++++||||. +++|+|+||+++ ++.+.+.+..... .+.++++.|.++..++....+. ++.
T Consensus 260 ~~~--~-----~~~~~i~~~S~sK~-~~~G~r~G~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~ 329 (444)
T 3if2_A 260 AHL--N-----WDNNTILCFSLSKI-GLPGMRTGIIVA-DAKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIK-QLS 329 (444)
T ss_dssp CCC--C-----CCTTEEEEEESTTT-TCGGGCCEEEEC-CHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHH-HHH
T ss_pred ccc--c-----CCCCEEEEechhhc-cCCCCceEEEEE-CHHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCchh-HHH
Confidence 100 0 24789999999997 789999999998 5666666554332 2457889999999999887653 333
Q ss_pred HH-HHHHHHHHHHHHHHhhhc----CCceeecCCceEEEeeecCc-hhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC
Q 011570 333 AE-SAKRIAERHKAFTWGLSQ----VGIGCLKSNAGLFLWMDLHH-LLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP 406 (483)
Q Consensus 333 ~~-~~~~l~~~~~~l~~~L~~----~gi~~~~~~~g~f~~~~l~~-~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~ 406 (483)
.+ .++.++++++.+.+.|.+ .++.+..+.+|+|+|++++. ..+ ..+++..|. ++||.++||+.|...
T Consensus 330 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~l~~~l~-~~gi~v~~g~~~~~~ 402 (444)
T 3if2_A 330 DNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPIS------TLDLYERLK-AKGTLIVPSEYFFPG 402 (444)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCSSC------HHHHHHHHH-HTTEECEEGGGSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCCCC------HHHHHHHHH-HCCeEEecchhhcCC
Confidence 43 677788888888777765 26778888999999999975 222 236677664 679999999988643
Q ss_pred C--------CCEEEEEeccCCHHHHHHHHHHHHHHHHHhhhc
Q 011570 407 N--------PGWFRVCFANMDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 407 ~--------~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
. .+++||+++. +++++++++++|++++++..++
T Consensus 403 ~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~~~~~ 443 (444)
T 3if2_A 403 VDVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEVVRELYDN 443 (444)
T ss_dssp CCCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHHHHHHHcc
Confidence 1 2689999996 9999999999999999877543
No 72
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=7.2e-42 Score=346.28 Aligned_cols=345 Identities=17% Similarity=0.192 Sum_probs=263.9
Q ss_pred CCcccccchh---hh---hcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 46 NGVIQMGLAE---NL---LCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 46 ~~~i~l~~~~---n~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
.++|||+.+. +. .+++.+.+++.+... . .....|++..|..+||+++++++....+ .++++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~----------~-~~~~~y~~~~g~~~lr~~la~~~~~~~~--~~~~~ 92 (396)
T 2q7w_A 26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLE----------N-ETTKNYLGIDGIPEFGRCTQELLFGKGS--ALIND 92 (396)
T ss_dssp --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHH----------H-CCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHHT
T ss_pred CCceecccccccCCCCCccCcHHHHHHHHhhcC----------c-ccccCCCCCCCCHHHHHHHHHHHhcCCC--Ccccc
Confidence 4678999997 21 233555555543100 0 1245788888999999999999964322 22468
Q ss_pred CcEEE--eCChhHHHHHHHHHh--cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 120 DRIVM--SGGATGAHETVAFCL--ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 120 ~~i~i--t~G~~~al~~~~~~l--~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
++|++ |+|+++++..++.++ +.+||+|+++.|+|+.+...++.. |.+++.++++++++|.+|++.+++++.+.
T Consensus 93 ~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-- 169 (396)
T 2q7w_A 93 KRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSA-GLEVREYAYYDAENHTLDFDALINSLNEA-- 169 (396)
T ss_dssp TCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHT-TCEEEEEECEETTTTEECHHHHHHHHTTC--
T ss_pred ccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHc-CCceEEEecccCCCCCcCHHHHHHHHHhC--
Confidence 89998 999999999998766 469999999999999999988886 99999999864446889999999988631
Q ss_pred cCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEec
Q 011570 196 SNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYS 275 (483)
Q Consensus 196 ~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S 275 (483)
.++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++...+.++..+.. ..+++++++|
T Consensus 170 -~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~s 243 (396)
T 2q7w_A 170 -QAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAA-----MHKELIVASS 243 (396)
T ss_dssp -CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHH-----HCSCEEEEEE
T ss_pred -CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHh-----cCCcEEEEEe
Confidence 1246788889999999999999999999999999999999999999876542012234544433 2478999999
Q ss_pred CccccCCCCceEEEEEe--cCh----HHHHHHHHh--hhcCCCChHHHHHHHHhcCChh---HHHHHHHHHHHHHHHHHH
Q 011570 276 LSKDMGFPGFRVGIIYS--YND----QVVSCARKM--SSFGLVSSQTQHLIATMLSDDQ---FVEKFIAESAKRIAERHK 344 (483)
Q Consensus 276 ~SK~~g~~GlRiG~li~--~~~----~l~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~---~~~~~~~~~~~~l~~~~~ 344 (483)
|||.+|++|+|+||+++ +++ .+.+.+... ..+..+++++|.++.+++++.. .+.+++++.++.++++++
T Consensus 244 ~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 323 (396)
T 2q7w_A 244 YSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQ 323 (396)
T ss_dssp CTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHH
T ss_pred ccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 333 344433332 2334458899999999998752 124567788889999999
Q ss_pred HHHHhhhcCC----ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCH
Q 011570 345 AFTWGLSQVG----IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDD 420 (483)
Q Consensus 345 ~l~~~L~~~g----i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~ 420 (483)
++.+.|++.| +++.++.+|+|+|++++. +++..+++++||.+.|| +||+++..++
T Consensus 324 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gv~v~~~----------~Ris~~~~~~ 382 (396)
T 2q7w_A 324 LFVNTLQEKGANRDFSFIIKQNGMFSFSGLTK-----------EQVLRLREEFGVYAVAS----------GRVNVAGMTP 382 (396)
T ss_dssp HHHHHHHHTTCCSCCTHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------CEEEGGGCCT
T ss_pred HHHHHHHhcCCCCCcceecCCCceEEEecCCH-----------HHHHHHHHhcCeeecCC----------ceEEEeecCH
Confidence 9999999886 788888999999987752 34556676789999874 6999986689
Q ss_pred HHHHHHHHHHHHH
Q 011570 421 RTMEIALSRITSF 433 (483)
Q Consensus 421 e~l~~~l~~L~~~ 433 (483)
+++++++++|+++
T Consensus 383 e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 383 DNMAPLCEAIVAV 395 (396)
T ss_dssp TTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999875
No 73
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=2.8e-41 Score=344.06 Aligned_cols=348 Identities=17% Similarity=0.179 Sum_probs=265.3
Q ss_pred CCcccccchhh------hhcHHHHHHHHhc-CCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcC
Q 011570 46 NGVIQMGLAEN------LLCHELVEDWLMN-NPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFD 118 (483)
Q Consensus 46 ~~~i~l~~~~n------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~ 118 (483)
.++|+|+.+.. ..+++.+.+++.+ .... .....|++..|.++||+++++++...+| +.++
T Consensus 29 ~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~-----------~~~~~y~~~~g~~~lr~~ia~~~~~~~~--~~~~ 95 (412)
T 1yaa_A 29 ATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDS-----------SYNHEYLGITGLPSLTSNAAKIIFGTQS--DALQ 95 (412)
T ss_dssp SSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCT-----------TCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHH
T ss_pred CCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCc-----------ccccCCCCCCCcHHHHHHHHHHHhcCCC--CCCC
Confidence 46789998763 1234555555543 2111 1245788888999999999999975544 4457
Q ss_pred CCcEEE--eCChhHHHHHHH--HHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 119 PDRIVM--SGGATGAHETVA--FCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 119 ~~~i~i--t~G~~~al~~~~--~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
+++|++ |+|+++++.+++ ..++.+||+|+++.|+|..+...++.. |++++.+++.++.++.+|++.|++++++.
T Consensus 96 ~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~~- 173 (412)
T 1yaa_A 96 EDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQ-GLKTATYPYWANETKSLDLNGFLNAIQKA- 173 (412)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTT-TCCEEEEECEETTTTEECHHHHHHHHHHS-
T ss_pred cceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHc-CceEEEEeeecCCCCccCHHHHHHHHHhC-
Confidence 899999 999999999884 444579999999999999999988876 99999999832236789999999998752
Q ss_pred hcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC-CCcchHHHhhhhccccCCC---eE
Q 011570 195 ESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE-SSFVSIAEIIDQDIACNRN---LI 270 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~-~~~~s~~~l~~~~~~~~~~---~v 270 (483)
..++.++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ..+.++..+.. ..+ ++
T Consensus 174 --~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 246 (412)
T 1yaa_A 174 --PEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVE-----KLSTVSPV 246 (412)
T ss_dssp --CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHH-----HTTTTCCE
T ss_pred --CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHh-----cCCCCcce
Confidence 11244555599999999999999999999999999999999999988765520 02234444432 124 89
Q ss_pred EEEecCccccCCCCceEEEEE--e----cChH----HHHHHHH-hh-hcCCCChHHHHHHHHhcCChhH---HHHHHHHH
Q 011570 271 HIVYSLSKDMGFPGFRVGIIY--S----YNDQ----VVSCARK-MS-SFGLVSSQTQHLIATMLSDDQF---VEKFIAES 335 (483)
Q Consensus 271 i~~~S~SK~~g~~GlRiG~li--~----~~~~----l~~~~~~-~~-~~~~~s~~~q~~~~~~l~~~~~---~~~~~~~~ 335 (483)
++++||||.+|++|+|+||++ + .++. +.+.+.. .. .+..+++++|.++.+++.+..+ ..+++++.
T Consensus 247 i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 326 (412)
T 1yaa_A 247 FVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTM 326 (412)
T ss_dssp EEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred EEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999999999997899999998 6 1344 5555544 22 2344578999999999987642 14567888
Q ss_pred HHHHHHHHHHHHHhhhcCC----ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEE
Q 011570 336 AKRIAERHKAFTWGLSQVG----IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWF 411 (483)
Q Consensus 336 ~~~l~~~~~~l~~~L~~~g----i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~i 411 (483)
+++++++++++.+.|++++ +++..+.+|+|+|+.++. +....+++++||.+.+ ++
T Consensus 327 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gi~v~~----------~~ 385 (412)
T 1yaa_A 327 SSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTP-----------QMVKRLEETHAVYLVA----------SG 385 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCT----------TS
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCCCH-----------HHHHHHHHhCCEEecc----------Cc
Confidence 8999999999999998876 888889999999986642 2236677778999986 37
Q ss_pred EEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 412 RVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 412 Ris~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
||+++..+++++++++++|+++++.
T Consensus 386 Ris~~~~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 386 RASIAGLNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp EEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred EEEEccCCHhHHHHHHHHHHHHHHh
Confidence 9999866899999999999998763
No 74
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=5.2e-41 Score=334.49 Aligned_cols=326 Identities=18% Similarity=0.283 Sum_probs=258.5
Q ss_pred CCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++|||+.++|+++ ++.+.+++.+.. .....|++..+ .+||+++|++++ +++++|++
T Consensus 15 ~~~id~~~~~~~~~~~~~v~~a~~~~~-------------~~~~~y~~~~~-~~lr~~la~~~~--------~~~~~i~~ 72 (350)
T 3fkd_A 15 SEIVNFSTTVWTDGDKDHLEKHLVENL-------------NCIRHYPEPDA-GTLRQMLAKRNS--------VDNNAILV 72 (350)
T ss_dssp -CCEECSCCSCCCSCCHHHHHHHHHTG-------------GGGGSCCCTTC-HHHHHHHHHHTT--------CCGGGEEE
T ss_pred ccEEEccCCCCCCCCCHHHHHHHHHhH-------------hHHhcCCCCcH-HHHHHHHHHHhC--------cCHHHEEE
Confidence 57899999998886 455556554421 23467888776 999999999986 57899999
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeec-CCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVC-DSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~-~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
|+|+++++.+++.++. ||+|+++.|+|..+...++.. |++++.+++ ++.+++. + +++++|
T Consensus 73 t~g~~~al~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~--~--------------~~~~~v 133 (350)
T 3fkd_A 73 TNGPTAAFYQIAQAFR--GSRSLIAIPSFAEYEDACRMY-EHEVCFYPSNEDIGEAD--F--------------SNMDFC 133 (350)
T ss_dssp ESHHHHHHHHHHHHTT--TCEEEEEESCCHHHHHHHHHT-TCEEEEEETTSCGGGSC--C--------------TTCSEE
T ss_pred cCCHHHHHHHHHHHHC--CCEEEEeCCCcHHHHHHHHHc-CCeEEEEecCCccccCc--c--------------CCCCEE
Confidence 9999999999999987 999999999999999988886 999999998 6544333 2 178999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++||||||.+++.+++.+|++.|.++ +||+||+|.++.+.+ .. .. ... . ..+++++++||||.+|++
T Consensus 134 ~i~~p~nptG~~~~~~~l~~l~~~~~~~--~li~Dea~~~~~~~~-~~-~~-~~~-~-----~~~~~i~~~S~sK~~~~~ 202 (350)
T 3fkd_A 134 WLCNPNNPDGRLLQRTEILRLLNDHPDT--TFVLDQSYVSFTTEE-VI-RP-ADI-K-----GRKNLVMVYSFSHAYGIP 202 (350)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHCTTS--EEEEECTTTTSCSSC-CC-CG-GGG-T-----TCSSEEEEEESHHHHSCG
T ss_pred EEeCCCCCcCCCCCHHHHHHHHHhCCCC--EEEEECchhhhccCc-ch-hh-HHh-h-----cCCCEEEEecCchhccCc
Confidence 9999999999999999999999988765 999999999876554 22 11 212 2 357899999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCc
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNA 362 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~ 362 (483)
|+|+||+++ ++.+.+.+......+.+++++|.++..++.+.+. +.++.++.. ++++++.+.|+++ |+.+.++.+
T Consensus 203 G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~~~ 277 (350)
T 3fkd_A 203 GLRIGYIVA-NKDFMKRVAAFSTPWAVNALAIEAAKFILIHPAQ---FTLPIRKWQ-RNTVDFITALNRLDGVEVHPSGT 277 (350)
T ss_dssp GGCCEEEEC-CHHHHHHHHTTCCTTCSCHHHHHHHHHHHHCTTT---TCCCHHHHH-HHHHHHHHHHHHSTTEEECCCSS
T ss_pred chheEeEEe-CHHHHHHHHHhCCCCCCCHHHHHHHHHHHhCHHH---HHHHHHHHH-HHHHHHHHHHhcCCCcEECCCCC
Confidence 999999999 6777777766666667899999999888876541 122333333 7778899999888 888876655
Q ss_pred eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhh
Q 011570 363 GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 363 g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
.|+|++++.. +..++++.|++++||.++||+.|+...++++||+++ +++++++++++|++++++++
T Consensus 278 -~~~~~~~~~~-------~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~~~~~ 343 (350)
T 3fkd_A 278 -TFFLLRLKKG-------TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ--RPAQNQLFIKALETFLEKYE 343 (350)
T ss_dssp -SEEEEEESSS-------CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHTC--
T ss_pred -cEEEEECCCC-------CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHHHhc
Confidence 5788888753 134778888875799999999998766889999998 78889999999988776653
No 75
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=1.3e-41 Score=344.37 Aligned_cols=333 Identities=17% Similarity=0.209 Sum_probs=249.3
Q ss_pred CCCCcccccchhhhhcHH-HHHHHHhcCCCCccccccccccccccccCCCCCCc-----HHHHHHHHHHHHhhhCCCCCc
Q 011570 44 NPNGVIQMGLAENLLCHE-LVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGL-----PEFRNAVAKFMGKVRGNRITF 117 (483)
Q Consensus 44 ~~~~~i~l~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~-----~~Lr~~ia~~~~~~~g~~~~~ 117 (483)
+..++|+|+.+++.++.+ .+.+++.... ..........|++..|. ++||++||+|++ .+| +.+
T Consensus 20 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g--~~~ 88 (391)
T 3bwn_A 20 MSDFVVNLDHGDPTAYEEYWRKMGDRCTV--------TIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVG--NAA 88 (391)
T ss_dssp TTTSCEECSSCCCGGGHHHHHHTGGGSCE--------EECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHC--SBC
T ss_pred CCCCeeEcCCCCCCCCCCHHHHHhHHHHh--------hcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcC--CCC
Confidence 456789999998876532 2333221100 00001134679999998 999999999998 455 556
Q ss_pred CC-CcEEEeCChhHHHHHHHHHhcCCCC----eEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHH
Q 011570 118 DP-DRIVMSGGATGAHETVAFCLADPGD----AFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEK 192 (483)
Q Consensus 118 ~~-~~i~it~G~~~al~~~~~~l~~~gd----~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~ 192 (483)
++ ++|++|+|+++++..++.+++++|| +|++++|+|+.|...++.. |++++.++++.++ ++
T Consensus 89 ~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~-g~~~~~~~~d~~~---l~---------- 154 (391)
T 3bwn_A 89 TEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYV-RSGMYKWEGDAWG---FD---------- 154 (391)
T ss_dssp CSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTT-CBTTEEEEEESTT---CC----------
T ss_pred CCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHc-CCeEEEecCCHHH---cC----------
Confidence 67 5999999999999999999999999 9999999999999998876 9999988876532 22
Q ss_pred HHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEE
Q 011570 193 AQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHI 272 (483)
Q Consensus 193 ~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~ 272 (483)
.+++++|+++|||||||.+++ +|++.+..++++||+||+|.+ . . +.++.. ..+++|+
T Consensus 155 ----~~~~k~v~l~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~-~-~~~l~~--------~~~~~i~ 211 (391)
T 3bwn_A 155 ----KKGPYIELVTSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----P-H-YTPITR--------RQDHDIM 211 (391)
T ss_dssp ----CCSCEEEEEESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS----T-T-TSCCCC--------CBCCSEE
T ss_pred ----CCCCEEEEECCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----C-C-CCcccc--------CCCCeEE
Confidence 026899999999999999997 344422223499999999963 2 1 112111 2378999
Q ss_pred EecCccccCCCCceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHHhcCChh-H------HHHHHHHHHHHHHHHH
Q 011570 273 VYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIATMLSDDQ-F------VEKFIAESAKRIAERH 343 (483)
Q Consensus 273 ~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~-~------~~~~~~~~~~~l~~~~ 343 (483)
++||||.||++|+|+||+++.++.+.+.+..... .+++++++|.++..++.+.. + .++++++.++.+++++
T Consensus 212 ~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (391)
T 3bwn_A 212 LFTFSKITGHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRW 291 (391)
T ss_dssp EEEHHHHHSCGGGCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHH
T ss_pred EEechhhcCCCccceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999855666666655443 36689999999998887542 1 1456788899999999
Q ss_pred HHHHHhhhcC-CceeecC-------------CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCC
Q 011570 344 KAFTWGLSQV-GIGCLKS-------------NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPG 409 (483)
Q Consensus 344 ~~l~~~L~~~-gi~~~~~-------------~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~ 409 (483)
+++.+.|+++ |+++..+ .+|+|+|++++.. +++..+++++||.++||+.|+. .++
T Consensus 292 ~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~----------~~~~~~l~~~gV~v~pg~~fg~-~~~ 360 (391)
T 3bwn_A 292 EKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEE----------TDLVSELRRHKVMSRAGERCGS-DKK 360 (391)
T ss_dssp HHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESSS----------CCHHHHHHHTTEECEEGGGGTC-CTT
T ss_pred HHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCcH----------HHHHHHHHHCCEEEccCCCCCC-CCC
Confidence 9999999987 6666543 4556999999741 2244556678999999999975 568
Q ss_pred EEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 410 WFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 410 ~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
++|||++. +++++++++++|++++++
T Consensus 361 ~iRis~~~-~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 361 HVRVSMLS-REDVFNVFLERLANMKLI 386 (391)
T ss_dssp EEEEESCS-CHHHHHHHHHHHHSCC--
T ss_pred EEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 99999984 889999999999987654
No 76
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=1.5e-40 Score=342.55 Aligned_cols=316 Identities=16% Similarity=0.206 Sum_probs=253.7
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhhCCCCC---cCCCcEEE--eCChhHHHHH--HHHHhcCCCCeEEEeCCCCcChHHH
Q 011570 87 IAIFQDYHGLPEFRNAVAKFMGKVRGNRIT---FDPDRIVM--SGGATGAHET--VAFCLADPGDAFLVPTPYYPGFDRD 159 (483)
Q Consensus 87 ~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~---~~~~~i~i--t~G~~~al~~--~~~~l~~~gd~Vlv~~P~y~~~~~~ 159 (483)
...|++..|.+++|+++++++. | .. +++++|++ |+|+++++.+ .+.+++.+||+|++++|+|..+...
T Consensus 87 ~~~Y~~~~G~~~lr~~ia~~l~---g--~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~ 161 (448)
T 3meb_A 87 NKEYPPVAGFPLFLEAAQFLMF---G--KDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGI 161 (448)
T ss_dssp CCSCCCTTCCHHHHHHHHHHHH---C--TTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHH
T ss_pred CCCCCCCcchHHHHHHHHHHhc---C--CCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHH
Confidence 4579888999999999999983 2 11 23789999 9999999988 5566788999999999999999998
Q ss_pred Hh----hhcCcEEEEeecCCCC-CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcE
Q 011570 160 LR----WRTGVQLVPVVCDSSN-DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIH 234 (483)
Q Consensus 160 ~~----~~~G~~~~~v~~~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~ 234 (483)
++ .. |.+++.+++.+++ +|.+|++.+++++++. ..+++++++++||||||.+++.+++++|+++|+++|++
T Consensus 162 ~~~~~~~~-G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~ 237 (448)
T 3meb_A 162 YDKVFNKL-KVPYKEYTYLRKDGELEIDFSNTKKDIQSA---PEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHI 237 (448)
T ss_dssp HHHHHCTT-TSCCEEECCBCTTSCSSBCHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHhhHHhC-CCeEEEEeccccccCCCcCHHHHHHHHHhC---CCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCE
Confidence 88 75 9999999984444 6899999999999752 12567889999999999999999999999999999999
Q ss_pred EEEccccccCccCCC-CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEE--Ee--------cCh----HHHH
Q 011570 235 LVCDEIYAATVFTKE-SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGII--YS--------YND----QVVS 299 (483)
Q Consensus 235 iI~Deay~~~~~~~~-~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~l--i~--------~~~----~l~~ 299 (483)
+|+||+|.++.+++. ....++..+.. ..+++++++||||.||++|+|+||+ ++ +++ .+..
T Consensus 238 li~Deay~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~ 312 (448)
T 3meb_A 238 AFFDSAYQGFATGSFEADAFAVRMFVD-----AGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVS 312 (448)
T ss_dssp EEEEESCTTTSSSCHHHHTHHHHHHHH-----TTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHH
T ss_pred EEEecccccccCCCcccCchhHHHHhh-----cCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHH
Confidence 999999998765530 01233444433 3578999999999999999999998 66 444 4444
Q ss_pred HHHHhh--hcCCCChHHHHHHHHhcCChhHH---HHHHHHHHHHHHHHHHHHHHhhhcC---C------ceeecCCceEE
Q 011570 300 CARKMS--SFGLVSSQTQHLIATMLSDDQFV---EKFIAESAKRIAERHKAFTWGLSQV---G------IGCLKSNAGLF 365 (483)
Q Consensus 300 ~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~l~~~~~~l~~~L~~~---g------i~~~~~~~g~f 365 (483)
.+.... .+..++.++|.+++.++.+..+. .+++++.+++++++++++.+.|+++ + +.+..+++|+|
T Consensus 313 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~ 392 (448)
T 3meb_A 313 GMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMF 392 (448)
T ss_dssp HHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSE
T ss_pred HHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEE
Confidence 444322 23456789999999999886532 2447788899999999999999887 3 55667899999
Q ss_pred EeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 366 LWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
+|+.++. +++..+++++||.+.||+ .|||++..+++++++++++|++++++
T Consensus 393 ~~~~~~~-----------~~~~~ll~~~gV~v~~G~---------gRis~a~~~~~~i~~~~~~l~~~l~~ 443 (448)
T 3meb_A 393 TFTGLTP-----------EHVDYLKEKWSIYLVKAG---------GRMSMCGLTESNCDYVAEAIHDAVTK 443 (448)
T ss_dssp EECCCCH-----------HHHHHHHHHHCEEECSGG---------GEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred EecCCCH-----------HHHHHHHHhCCEEEeCCC---------cEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 9988752 567778888899999985 29999866778899999999999874
No 77
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=1.3e-39 Score=327.07 Aligned_cols=333 Identities=15% Similarity=0.224 Sum_probs=260.6
Q ss_pred cccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeC
Q 011570 48 VIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSG 126 (483)
Q Consensus 48 ~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~ 126 (483)
.|||+.++|+++ ++.+.+++.+.... . ......|++..+ .++|+++|+++.+.+| +++++++|++|+
T Consensus 32 ~idl~~~~~~~~~~~~v~~a~~~~~~~------~---~~~~~~y~~~~~-~~l~~~la~~l~~~~g--~~~~~~~v~~~~ 99 (369)
T 3cq5_A 32 DIRLNTNENPYPPSEALVADLVATVDK------I---ATELNRYPERDA-VELRDELAAYITKQTG--VAVTRDNLWAAN 99 (369)
T ss_dssp SEECSSCCCCSCCCHHHHHHHHHHHHH------H---GGGTTSCCCTTC-HHHHHHHHHHHHHHHC--CCCCGGGEEEES
T ss_pred ceeccCCCCCCCCCHHHHHHHHHHHHh------c---ccccccCCCccH-HHHHHHHHHhhhhccc--CCCChHhEEECC
Confidence 389999998765 44455544431000 0 012457877666 7999999999988776 446789999999
Q ss_pred ChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEe
Q 011570 127 GATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLIT 206 (483)
Q Consensus 127 G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~ 206 (483)
|+++++..++.+++++||+|+++.|+|+.+...++.. |.+++.+|.++ +|.+|++.+++++++. ++++|+++
T Consensus 100 G~~~al~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~ 171 (369)
T 3cq5_A 100 GSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGT-HTEFIAVSRGA--DFRIDMDVALEEIRAK-----QPDIVFVT 171 (369)
T ss_dssp HHHHHHHHHHHHHCSTTCEEEEEESSCTHHHHHHHHT-TCEEEEEECCT--TSSCCHHHHHHHHHHH-----CCSEEEEE
T ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHc-CCEEEEecCCc--CCCCCHHHHHHHhhcc-----CCCEEEEe
Confidence 9999999999999999999999999999999888876 99999999753 5789999999998752 67899999
Q ss_pred CCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCC-eEEEEecCccccCCCCc
Q 011570 207 NPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRN-LIHIVYSLSKDMGFPGF 285 (483)
Q Consensus 207 ~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~-~vi~~~S~SK~~g~~Gl 285 (483)
+||||||.+++.+++.+|++.| +++||+||+|.++.+. .+...+.+ ..+ ++++++|+||.+|++|+
T Consensus 172 ~~~nptG~~~~~~~l~~l~~~~---~~~li~De~~~~~~~~-----~~~~~~~~-----~~~~~~i~~~s~sK~~~~~G~ 238 (369)
T 3cq5_A 172 TPNNPTGDVTSLDDVERIINVA---PGIVIVDEAYAEFSPS-----PSATTLLE-----KYPTKLVVSRTMSKAFDFAGG 238 (369)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHC---SSEEEEECTTGGGCCS-----CCGGGGTT-----TCTTTEEEEEESSSTTSCGGG
T ss_pred CCCCCCCCCCCHHHHHHHHHhC---CCEEEEECCchhhcCC-----cchHHHHh-----hCCCCEEEEEechHhcCCccc
Confidence 9999999999987777777754 5999999999875432 22223322 235 88999999999999999
Q ss_pred eEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEE
Q 011570 286 RVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLF 365 (483)
Q Consensus 286 RiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f 365 (483)
|+||++++ +.+.+.+......+.+++++|.++.+++...+ ++++.+++++++++++.+.|.+.|+++.++. |+|
T Consensus 239 r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~ 312 (369)
T 3cq5_A 239 RLGYFVAN-PAFIDAVMLVRLPYHLSALSQAAAIVALRHSA----DTLGTVEKLSVERVRVAARLEELGYAVVPSE-SNF 312 (369)
T ss_dssp CCEEEEEC-THHHHHHHTTSCTTCSCHHHHHHHHHHHHTHH----HHHTHHHHHHHHHHHHHHHHHHHTCEEECCS-SSE
T ss_pred ceEEEEeC-HHHHHHHHHcCCCCCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHHhCCCEECCCC-CeE
Confidence 99999995 55666665544445688999999888887643 4667778888999999999988888887554 568
Q ss_pred EeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 366 LWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
+|++++. + ..++.+.|. ++||.+.|| + .++++||+++ +++++++++++|+++++
T Consensus 313 ~~~~~~~--~------~~~l~~~l~-~~gi~v~~~---~--~~~~iRis~~--~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 313 VFFGDFS--D------QHAAWQAFL-DRGVLIRDV---G--IAGHLRTTIG--VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp EEEECCS--S------HHHHHHHHH-HTTEECBCC---S--CTTEEEEECC--CHHHHHHHHHHHHHHHT
T ss_pred EEEECCC--C------HHHHHHHHH-HCCEEEEEC---C--CCCeEEEEeC--CHHHHHHHHHHHHHHHh
Confidence 8998861 1 236677765 679999998 1 2579999998 78999999999998764
No 78
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=3e-40 Score=335.02 Aligned_cols=347 Identities=14% Similarity=0.113 Sum_probs=254.0
Q ss_pred cccccchh------hhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCc
Q 011570 48 VIQMGLAE------NLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDR 121 (483)
Q Consensus 48 ~i~l~~~~------n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~ 121 (483)
.|||+++. ++..++.++++....... .....|.+..|.++||+++++++.... .+.....
T Consensus 46 kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~-----------~~~~~Y~p~~G~p~lr~aia~~~~g~~---~~~~~~~ 111 (420)
T 4h51_A 46 KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDM-----------NLDYEYLPISGYQPFIDEAVKIIYGNT---VELENLV 111 (420)
T ss_dssp CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHT-----------TCCCCCCCTTCCHHHHHHHHHHHHC------CGGGEE
T ss_pred CEEeecCcccCCCCCCCCCHHHHHHHHHHhcC-----------CCCCCCCCcCChHHHHHHHHHHhcCCC---ccccccc
Confidence 58999982 222346676654431110 123469999999999999999974321 1112223
Q ss_pred EEEeCChhHHHHHHHHH----hcCCCCeEEEeCCCCcChHHHHhhhcCcE-EEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 122 IVMSGGATGAHETVAFC----LADPGDAFLVPTPYYPGFDRDLRWRTGVQ-LVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 122 i~it~G~~~al~~~~~~----l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~-~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
.+-|.|++.++...+.. +.+|||+|++++|+|+.|...++.. |.+ +..++..+.+++.+|.+.+.+.+...
T Consensus 112 ~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~a-G~~~V~~~~~~~~~~~~~d~~~~~~~l~~~--- 187 (420)
T 4h51_A 112 AVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAA-GWKNICTYAYYDPKTVSLNFEGMKKDILAA--- 187 (420)
T ss_dssp EEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHT-TCCCEEEEECEEGGGTEECHHHHHHHHHHS---
T ss_pred eeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHc-CCeEEEeeccccccccCCCHHHHHHHHhcc---
Confidence 45588888887766654 4579999999999999999999986 886 44555555567889999998888653
Q ss_pred CCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcc--hHHHhhhhccccCCCeEEEEe
Q 011570 197 NIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFV--SIAEIIDQDIACNRNLIHIVY 274 (483)
Q Consensus 197 ~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~--s~~~l~~~~~~~~~~~vi~~~ 274 (483)
.++++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++ .... .+..... ..++++++.
T Consensus 188 ~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~-~~~~~~~~~~~~~-----~~~~~i~~~ 261 (420)
T 4h51_A 188 PDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGS-LDTDAYAARLFAR-----RGIEVLLAQ 261 (420)
T ss_dssp CSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSC-HHHHTHHHHHHHH-----TTCCCEEEE
T ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCC-cccchHHHHhHHh-----hCceEEEEe
Confidence 3467788888999999999999999999999999999999999999987764 2211 1222222 457899999
Q ss_pred cCccccCCCCceEEEEEecChHHHHH------HHH--hhhcCCCChHHHHHHHHhcCChhHH---HHHHHHHHHHHHHHH
Q 011570 275 SLSKDMGFPGFRVGIIYSYNDQVVSC------ARK--MSSFGLVSSQTQHLIATMLSDDQFV---EKFIAESAKRIAERH 343 (483)
Q Consensus 275 S~SK~~g~~GlRiG~li~~~~~l~~~------~~~--~~~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~l~~~~ 343 (483)
||||.|+++|+|+||++++.+..... +.. ...+.+.+...|.+++.++.+.... ++.++.++++++++|
T Consensus 262 s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R 341 (420)
T 4h51_A 262 SFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMR 341 (420)
T ss_dssp ECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999865433221 111 1233556778889999999886533 445677889999999
Q ss_pred HHHHHhhhcCC----ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCC
Q 011570 344 KAFTWGLSQVG----IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMD 419 (483)
Q Consensus 344 ~~l~~~L~~~g----i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~ 419 (483)
+.+.+.|++.| |.++.+++|||.|+.++. +.++ +|+++||.+.|+. |||+++.+
T Consensus 342 ~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls~-----------e~v~-~L~e~~Vy~~~~g----------Ris~Agl~ 399 (420)
T 4h51_A 342 RTVYDELLRLQTPGSWEHVINQIGMFSFLGLSK-----------AQCE-YCQNHNIFITVSG----------RANMAGLT 399 (420)
T ss_dssp HHHHHHHHHTTCSSCCTHHHHCCSSEEECCCCH-----------HHHH-HHHHTTEECCTTC----------EEEGGGCC
T ss_pred HHHHHHHHHhCCCCCCCeecCCCceEEecCcCH-----------HHHH-HHHhCCEEEcCCC----------EEEeccCC
Confidence 99999999885 455678889999987753 2233 4567899988752 99998889
Q ss_pred HHHHHHHHHHHHHHHHHhhhc
Q 011570 420 DRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 420 ~e~l~~~l~~L~~~l~~~~~~ 440 (483)
++.++.+.++|.+++++..+|
T Consensus 400 ~~ni~~~a~aI~~vvr~i~re 420 (420)
T 4h51_A 400 HETALMLAQTINDAVRNVNRE 420 (420)
T ss_dssp HHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999876553
No 79
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=1.4e-39 Score=325.58 Aligned_cols=330 Identities=18% Similarity=0.274 Sum_probs=256.3
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
..++|+|+.++|+++ ++.+.+++.+.... . ......|++. +..+||+++|++++ +++++|+
T Consensus 25 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----~----~~~~~~y~~~-~~~~lr~~la~~~g--------~~~~~i~ 86 (360)
T 3hdo_A 25 IASWIKLNTNENPYPPSPEVVKAILEELGP-----D----GAALRIYPSA-SSQKLREVAGELYG--------FDPSWII 86 (360)
T ss_dssp CTTSEECSSCCCSSCCCHHHHHHHHHHHTT-----T----CGGGGSCCCS-SCHHHHHHHHHHHT--------CCGGGEE
T ss_pred ccceeeccCCCCCCCCCHHHHHHHHHHHhc-----c----cchhhcCCCC-chHHHHHHHHHHhC--------cCcceEE
Confidence 357899999999886 45566655441110 0 0114568765 56999999999986 5789999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.+++++||+|+++.|+|..+...++.. |.+++.++++++ +.+ +++++. .+++++
T Consensus 87 ~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~~--~~~--~~l~~~--------~~~~~v 153 (360)
T 3hdo_A 87 MANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQ-GARVRTFGLTGD--FRI--AGFPER--------YEGKVF 153 (360)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHH-TCEEEEECBCTT--SSB--TTCCSS--------BCSSEE
T ss_pred EcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHC-CCEEEEeeCCCC--CCH--HHHHhh--------cCCCEE
Confidence 9999999999999999999999999999999999988886 999999998653 444 444322 246799
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++|+||||.+++.+++.+ +|+++|+++|+||+|.++ .+ ....+.. . ..+++++++|+||.+|++
T Consensus 154 ~i~~p~nptG~~~~~~~l~~---l~~~~~~~li~De~~~~~--~~-~~~~~~~---~-----~~~~~i~~~s~sK~~g~~ 219 (360)
T 3hdo_A 154 FLTTPNAPLGPSFPLEYIDE---LARRCAGMLVLDETYAEF--AE-SNALELV---R-----RHENVVVTRTLSKSYSLA 219 (360)
T ss_dssp EEESSCTTTCCCCCHHHHHH---HHHHBSSEEEEECTTGGG--SS-CCCTHHH---H-----HCSSEEEEEESTTTTSCT
T ss_pred EEeCCCCCCCCCcCHHHHHH---HHHHCCCEEEEECChHhh--CC-cchhHHh---c-----cCCCEEEEecchHhhcCC
Confidence 99999999999999665554 556889999999999874 44 3223322 2 247889999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCce
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAG 363 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g 363 (483)
|+|+||+++ ++.+.+.+......+.+++++|.++.+++.+.+ ++++.+++++++++++.+.|+++|+.+.++.+
T Consensus 220 G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~- 293 (360)
T 3hdo_A 220 GMRIGLAIA-RPEVIAALDKIRDHYNLDRLAQAACVAALRDQA----YLSECCRRIRETREWFTTELRSIGYDVIPSQG- 293 (360)
T ss_dssp TSCCEEEEC-CHHHHHHHHHHSCSCCSCHHHHHHHHHHHHCHH----HHHHHHHHHHHHHHHHHHHHHHTTCEECCCSS-
T ss_pred ccceeeEee-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHHHCCCEEcCCCc-
Confidence 999999999 677777776666566789999999999988744 36777888899999999999988988876655
Q ss_pred EEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 364 LFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 364 ~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
.|+|++++.. + ..++.+.|. ++||.+++|..+ ..++++||+++ +++++++++++|+++.+..
T Consensus 294 ~~~~~~~~~~-~------~~~l~~~l~-~~gi~v~~~~~~--~~~~~iRis~~--~~~e~~~l~~al~~~~~~~ 355 (360)
T 3hdo_A 294 NYLFATPPDR-D------GKRVYDGLY-ARKVLVRHFSDP--LLAHGMRISIG--TREEMEQTLAALKEIGEGH 355 (360)
T ss_dssp SEEEEECTTC-C------HHHHHHHHH-HTTEECBCCCST--TTTTSEEEECC--CHHHHHHHHHHHHHHHC--
T ss_pred cEEEEECCCC-C------HHHHHHHHH-HCCEEEEECCCC--CCCCEEEEEcC--CHHHHHHHHHHHHHHhccc
Confidence 5888887631 1 236666665 569999998752 34679999998 8999999999999876543
No 80
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=9.5e-41 Score=337.93 Aligned_cols=342 Identities=16% Similarity=0.176 Sum_probs=261.5
Q ss_pred CCcccccchhh--h----hcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 46 NGVIQMGLAEN--L----LCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 46 ~~~i~l~~~~n--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
.++|||+.++. + .+++.+.+++.+... . .....|++..|..+||+++|+++.. ..+++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~----------~-~~~~~y~~~~g~~~lr~~la~~~~~-----~~~~~ 89 (394)
T 2ay1_A 26 QGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLE----------T-ETTKTYAGLSGEPEFQKAMGELILG-----DGLKS 89 (394)
T ss_dssp TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHH----------H-CCCCCCCCSSCCHHHHHHHHHHHHG-----GGCCG
T ss_pred ccccccccceeeCCCCCccCcHHHHHHHHHhcC----------C-cccCCCCCCCCcHHHHHHHHHHHhC-----CCCCc
Confidence 45789999872 1 234556665543100 0 1345798888999999999999842 12368
Q ss_pred CcEEE--eCChhHHHHHHHHHhcC--CCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 120 DRIVM--SGGATGAHETVAFCLAD--PGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 120 ~~i~i--t~G~~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
++|++ |+|+++++..++.++.. +||+|+++.|+|+.+...++.. |.+++.++++.++++.+|++.+++++++.
T Consensus 90 ~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-- 166 (394)
T 2ay1_A 90 ETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFM-GLPVQTYRYFDAETRGVDFEGMKADLAAA-- 166 (394)
T ss_dssp GGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHH-TCCEEEEECEETTTTEECHHHHHHHHHTC--
T ss_pred ccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHc-CCceEEEecccccCCccCHHHHHHHHHhC--
Confidence 89999 99999999999987754 9999999999999999988886 99999999864456789999999998641
Q ss_pred cCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEec
Q 011570 196 SNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYS 275 (483)
Q Consensus 196 ~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S 275 (483)
..+++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++.....++..+.. ..+++++++|
T Consensus 167 -~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~s 240 (394)
T 2ay1_A 167 -KKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIAS-----RIPEVLIAAS 240 (394)
T ss_dssp -CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHH-----HCSSEEEEEE
T ss_pred -CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhh-----cCCCEEEEEe
Confidence 1236677889999999999999999999999999999999999999865542001234443432 2467899999
Q ss_pred CccccCCCCceEEEEEe--cChHHH----HHHHHh--hhcCCCChHHHHHHHHhcCChh---HHHHHHHHHHHHHHHHHH
Q 011570 276 LSKDMGFPGFRVGIIYS--YNDQVV----SCARKM--SSFGLVSSQTQHLIATMLSDDQ---FVEKFIAESAKRIAERHK 344 (483)
Q Consensus 276 ~SK~~g~~GlRiG~li~--~~~~l~----~~~~~~--~~~~~~s~~~q~~~~~~l~~~~---~~~~~~~~~~~~l~~~~~ 344 (483)
|||.+|++|+|+||+++ +++.+. ..+... ..+..+++++|.++.+++.+.. .+.+++++.+++++++++
T Consensus 241 ~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 320 (394)
T 2ay1_A 241 CSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLRE 320 (394)
T ss_dssp CTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 444332 222211 2234458899999988887752 224567888899999999
Q ss_pred HHHHhhhcCC----ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCH
Q 011570 345 AFTWGLSQVG----IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDD 420 (483)
Q Consensus 345 ~l~~~L~~~g----i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~ 420 (483)
++.+.|++++ +++..+.+|+|+|++++. +....+++++||.+.|| +||+++..++
T Consensus 321 ~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~l~~~gi~v~~~----------~Ris~~~~~~ 379 (394)
T 2ay1_A 321 QLAGELRDLSGSDRFGFVAEHRGMFSRLGATP-----------EQVKRIKEEFGIYMVGD----------SRINIAGLND 379 (394)
T ss_dssp HHHHHHHHHHTSSTTTHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------CEEEGGGCCT
T ss_pred HHHHHHHhcCCCCCeeEEcCCceEEEeeCCCH-----------HHHHHHHHhCCEEecCC----------CeEEeecCCH
Confidence 9999998764 777788889999998752 23455666789999874 6999986689
Q ss_pred HHHHHHHHHHHHH
Q 011570 421 RTMEIALSRITSF 433 (483)
Q Consensus 421 e~l~~~l~~L~~~ 433 (483)
+++++++++|+++
T Consensus 380 ~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 380 NTIPILARAIIEV 392 (394)
T ss_dssp TTHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHc
Confidence 9999999999875
No 81
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=1.7e-39 Score=321.75 Aligned_cols=316 Identities=17% Similarity=0.263 Sum_probs=248.0
Q ss_pred CCCcccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE
Q 011570 45 PNGVIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV 123 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~ 123 (483)
+.++|+|+.++++++ ++.+.+++.+.... .....|++. +..++|+++|+++++. .+++++|+
T Consensus 18 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~-~~~~lr~~la~~~~~~-----~~~~~~v~ 80 (335)
T 1uu1_A 18 KRDKTYLALNENPFPFPEDLVDEVFRRLNS-----------DALRIYYDS-PDEELIEKILSYLDTD-----FLSKNNVS 80 (335)
T ss_dssp CCCSEEESSCCCSSCCCHHHHHHHHHTCCG-----------GGGGSCCCS-SCHHHHHHHHHHHTCS-----SCCGGGEE
T ss_pred CCcceECCCCCCCCCCCHHHHHHHHHHhhh-----------hhhhcCCCC-chHHHHHHHHHHcCCC-----CCCHHHEE
Confidence 357899999998764 55566666543210 124568664 6899999999999743 25688999
Q ss_pred EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 124 MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 124 it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
+|+|+++++..++.++ ||+|+++ |+|+.+...++.. |.+++.+|+++ +|.+|++++ + ++++|
T Consensus 81 ~~~G~~~al~~~~~~~---gd~Vl~~-p~y~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l-----~------~~~~v 142 (335)
T 1uu1_A 81 VGNGADEIIYVMMLMF---DRSVFFP-PTYSCYRIFAKAV-GAKFLEVPLTK--DLRIPEVNV-----G------EGDVV 142 (335)
T ss_dssp EESSHHHHHHHHHHHS---SEEEECS-SSCHHHHHHHHHH-TCEEEECCCCT--TSCCCCCCC-----C------TTEEE
T ss_pred EcCChHHHHHHHHHHh---CCcEEEC-CCcHHHHHHHHHc-CCeEEEeccCC--CCCCCHHHc-----C------CCCEE
Confidence 9999999999999988 8999999 9999999888876 99999999864 467888776 1 67899
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++||||||.+++.+++.+|++.| | ++|+||+|.++. . .++.+ +.. ..+++++++||||.+|++
T Consensus 143 ~l~~p~nptG~~~~~~~l~~l~~~~---~-~li~De~~~~~~--~-~~~~~---~~~-----~~~~~i~~~s~sK~~g~~ 207 (335)
T 1uu1_A 143 FIPNPNNPTGHVFEREEIERILKTG---A-FVALDEAYYEFH--G-ESYVD---FLK-----KYENLAVIRTFSKAFSLA 207 (335)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHTT---C-EEEEECTTHHHH--C-CCCGG---GGG-----TCSSEEEEEESTTTTTCG
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhC---C-EEEEECcchhhc--c-hhHHH---Hhh-----hCCCEEEEecchhhcCCc
Confidence 9999999999999999999998877 7 899999998743 2 22122 222 347889999999999999
Q ss_pred CceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCce
Q 011570 284 GFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAG 363 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g 363 (483)
|+|+||+++ ++.+.+.+......+.+++++|.++.+++...+ ++++.+++++++++++.+.|.+.|+.+.++ ++
T Consensus 208 G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~ 281 (335)
T 1uu1_A 208 AQRVGYVVA-SEKFIDAYNRVRLPFNVSYVSQMFAKVALDHRE----IFEERTKFIVEERERMKSALREMGYRITDS-RG 281 (335)
T ss_dssp GGCCEEEEE-CHHHHHHHHHHSCTTCSCHHHHHHHHHHHHTHH----HHHHHHHHHHHHHHHHHHHHHHHTCCBCCC-CS
T ss_pred ccCeEEEEe-CHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHHHCCcEEcCC-CC
Confidence 999999999 666776666655556789999999999987643 356677788899999999998878876544 56
Q ss_pred EEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 364 LFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 364 ~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
+|+|++++. . +..+++..|++ +||.++|+ ++++||+++ +++++++++++|+++
T Consensus 282 ~~~~~~~~~-~------~~~~~~~~l~~-~gi~v~~~-------~~~iRis~~--~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 282 NFVFVFMEK-E------EKERLLEHLRT-KNVAVRSF-------REGVRITIG--KREENDMILRELEVF 334 (335)
T ss_dssp SEEEEECCT-H------HHHHHHHHHHH-HTEEEEEE-------TTEEEEECC--CHHHHHHHHHHHHCC
T ss_pred eEEEEECCC-C------CHHHHHHHHHH-CCEEEEEC-------CCeEEEEeC--CHHHHHHHHHHHHhh
Confidence 789999874 1 13367777775 59999982 468999997 567899999998754
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=4.4e-36 Score=304.20 Aligned_cols=342 Identities=13% Similarity=0.086 Sum_probs=257.1
Q ss_pred CCCcccccchhh-hh-cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcE
Q 011570 45 PNGVIQMGLAEN-LL-CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRI 122 (483)
Q Consensus 45 ~~~~i~l~~~~n-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i 122 (483)
+.++|||+.+++ .+ +++.+.+++.+.... . ......|+...|..++++++++++.+.+| .+++
T Consensus 42 g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~------~---~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~~~v 106 (398)
T 3a2b_A 42 GRRVLMFGSNSYLGLTTDTRIIKAAQDALEK------Y---GTGCAGSRFLNGTLDIHVELEEKLSAYVG------KEAA 106 (398)
T ss_dssp TEEEEECSCSCTTCGGGCHHHHHHHHHHHHH------H---CSCCCSBTTTTCCCHHHHHHHHHHHHHHT------CSEE
T ss_pred CceEEEeecccccCCCCCHHHHHHHHHHHHH------c---CCCCCCcCcccCCcHHHHHHHHHHHHHhC------CCcE
Confidence 456789999977 44 344455544331000 0 01123466677888999999999988766 3699
Q ss_pred EEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 123 VMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
++|+|+++++..++.+++++||.|+++.|+|+.+...++.. |.+++.++. +|++.|++++++... .++++
T Consensus 107 ~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~-g~~~~~v~~-------~d~~~l~~~l~~~~~--~~~~~ 176 (398)
T 3a2b_A 107 ILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDGSRLS-FSKVIKYGH-------NNMEDLRAKLSRLPE--DSAKL 176 (398)
T ss_dssp EEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHS-SSEEEEECT-------TCHHHHHHHHHTSCS--SSCEE
T ss_pred EEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHc-CCceEEeCC-------CCHHHHHHHHHhhcc--CCceE
Confidence 99999999999999999999999999999999999988875 999999885 478999998864210 16889
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCe-EEEEecCccccC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNL-IHIVYSLSKDMG 281 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~-vi~~~S~SK~~g 281 (483)
|++++|+||||.+++ +++|+++|+++|++||+||+|+.+.++. . ..++..... ..++ +++++||||.+|
T Consensus 177 v~~~~~~nptG~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~-~-~~~~~~~~~-----~~~~~di~~~s~sK~~~ 246 (398)
T 3a2b_A 177 ICTDGIFSMEGDIVN---LPELTSIANEFDAAVMVDDAHSLGVIGH-K-GAGTASHFG-----LNDDVDLIMGTFSKSLA 246 (398)
T ss_dssp EEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSG-G-GCCHHHHHT-----CGGGCSEEEEESSSTTC
T ss_pred EEEeCCCCCCCCccC---HHHHHHHHHHcCcEEEEECCCcccccCC-C-CCchHhhcC-----CCcCCeEEEeccccccc
Confidence 999999999999998 8888999999999999999998765643 1 133333321 1234 689999999999
Q ss_pred CCCceEEEEEecChHHHHHHHHh-h--hcCCCChHHHHH-HHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcee
Q 011570 282 FPGFRVGIIYSYNDQVVSCARKM-S--SFGLVSSQTQHL-IATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGC 357 (483)
Q Consensus 282 ~~GlRiG~li~~~~~l~~~~~~~-~--~~~~~s~~~q~~-~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~ 357 (483)
++| ||+++ ++.+.+.+... . .....+++.|.+ +..++... ++.++.+++++++++++.+.|++.|+++
T Consensus 247 ~~G---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 318 (398)
T 3a2b_A 247 SLG---GFVAG-DADVIDFLKHNARSVMFSASMTPASVASTLKALEII----QNEPEHIEKLWKNTDYAKAQLLDHGFDL 318 (398)
T ss_dssp SSC---EEEEE-CHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH----HHCTHHHHHHHHHHHHHHHHHHHTTCCB
T ss_pred CCC---cEEEe-CHHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHH----hhCHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 778 99999 46666655442 2 223345566654 44666432 2356778888999999999999889888
Q ss_pred ecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC-CCCEEEEEecc-CCHHHHHHHHHHHHHHHH
Q 011570 358 LKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP-NPGWFRVCFAN-MDDRTMEIALSRITSFML 435 (483)
Q Consensus 358 ~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~-~~~~iRis~~~-~~~e~l~~~l~~L~~~l~ 435 (483)
.++. |+|+|+.++... ...+++..|+++ ||.+.||..|... .++++||+++. .+++++++++++|+++++
T Consensus 319 ~~~~-g~~~~~~~~~~~------~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 390 (398)
T 3a2b_A 319 GATE-SPILPIFIRSNE------KTFWVTKMLQDD-GVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFK 390 (398)
T ss_dssp CSCC-SSEEEEECCCHH------HHHHHHHHHHHT-TEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCC-CCEEEEEcCCHH------HHHHHHHHHHHC-CcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 7776 579999997532 234678888866 9999999888643 35799999986 599999999999999886
Q ss_pred Hh
Q 011570 436 KN 437 (483)
Q Consensus 436 ~~ 437 (483)
+.
T Consensus 391 ~~ 392 (398)
T 3a2b_A 391 QA 392 (398)
T ss_dssp HC
T ss_pred Hh
Confidence 54
No 83
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=2.1e-34 Score=291.43 Aligned_cols=304 Identities=17% Similarity=0.140 Sum_probs=228.4
Q ss_pred CCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEee
Q 011570 93 YHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVV 172 (483)
Q Consensus 93 ~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~ 172 (483)
..+..++++.++++++ .+++|++++| ++++..++.+++++||.|+++.|+|+.+...++.. |.+++.++
T Consensus 87 ~~~~~~l~~~la~~~~---------~~~~i~~~sG-t~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~-g~~~~~~~ 155 (399)
T 3tqx_A 87 QTIHKELEKDISEFLG---------TDDTILYSSC-FDANGGLFETLLGPEDAIISDELNHASIIDGIRLC-KAQRYRYK 155 (399)
T ss_dssp BHHHHHHHHHHHHHHT---------CSEEEEESCH-HHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSC-CSEEEEEC
T ss_pred chHHHHHHHHHHHHHC---------CCcEEEECch-HHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHc-CCceeEeC
Confidence 3346788888888875 2356666665 67999999999999999999999999999988875 99999988
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
. .|++.|++.+++...++.++++|++++|+||||.+++ +++|+++|+++|++||+||+|+...+.. . .
T Consensus 156 ~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~-~-~ 223 (399)
T 3tqx_A 156 N-------NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGE-N-G 223 (399)
T ss_dssp T-------TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSST-T-S
T ss_pred C-------CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCC-C-C
Confidence 5 4678899998876544447899999999999999999 8899999999999999999996433333 2 2
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh-hhc---CCCChHHHHHHHHhcCChhHH
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM-SSF---GLVSSQTQHLIATMLSDDQFV 328 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~-~~~---~~~s~~~q~~~~~~l~~~~~~ 328 (483)
.+......- ..+.+++++|+||.+| |++.||+++ ++.+.+.+... ..+ +..+++.+.++...+...
T Consensus 224 ~~~~~~~~~----~~~~di~~~s~sK~~~--g~~gG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--- 293 (399)
T 3tqx_A 224 RGTPEYCGV----ADRVDILTGTLGKALG--GASGGYTSG-HKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELL--- 293 (399)
T ss_dssp CCHHHHHTC----TTCCSEEEEESSSSSC--SSCCEEEEE-CHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHH---
T ss_pred CchHHhhCC----CCCCcEEEecchHhcc--cCceEEEEc-CHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHH---
Confidence 233333210 1255688999999997 344499999 45565555443 222 245666666665555432
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCC-CCC
Q 011570 329 EKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFH-CPN 407 (483)
Q Consensus 329 ~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~-~~~ 407 (483)
.++.++.+++++++++++.+.|++.|+++.++.+ .|+|+.++... ...+++..|++ +||.+.|+..+. ..+
T Consensus 294 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~~~~~~------~~~~~~~~l~~-~gi~v~~~~~~~~~~~ 365 (399)
T 3tqx_A 294 KTEGPQLRKQLQENSRYFRAGMEKLGFQLVPGNH-PIIPVMLGDAQ------LATNMADHLLQ-EGIYVVGFSYPVVPMG 365 (399)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSS-SEEEEEEECHH------HHHHHHHHHHH-TTEECCEECTTTSCTT
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHcCCCcCCCCC-CEEEEEeCCHH------HHHHHHHHHHH-CCCEEeeeCCCCCCCC
Confidence 2446778888999999999999988988886665 47888887532 23477888886 599999876543 234
Q ss_pred CCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 408 PGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 408 ~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
++++||+++. .+++++++++++|++++++.
T Consensus 366 ~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 366 KARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 5799999974 69999999999999998764
No 84
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=8.6e-34 Score=287.50 Aligned_cols=340 Identities=16% Similarity=0.123 Sum_probs=243.3
Q ss_pred CCCcccccchhhhhc---HHHHHHHHhcCCCCccccccccccccccccCC--CCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 45 PNGVIQMGLAENLLC---HELVEDWLMNNPKASICSAEGLNEFKGIAIFQ--DYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~--~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
...+|||+.+ ++++ ++.+.+++.+.... .+. ......|+ ...+..+||+++|++++ ++
T Consensus 44 g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~-----~~~--~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~- 106 (401)
T 1fc4_A 44 GSHVINFCAN-NYLGLANHPDLIAAAKAGMDS-----HGF--GMASVRFICGTQDSHKELEQKLAAFLG--------ME- 106 (401)
T ss_dssp SCEEEECCCS-CTTSCTTCHHHHHHHHHHHHH-----HCS--CCCSCHHHHCCBHHHHHHHHHHHHHHT--------CS-
T ss_pred CccEEEeecc-CcccccCCHHHHHHHHHHHHH-----hCC--CCCCCCcccCCcHHHHHHHHHHHHHhC--------CC-
Confidence 4567899988 4553 44555544431000 000 00011232 24467899999999985 33
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
++|++++| ++++..++.+++++||.|+++.|+|+.+...++.. |.+++.++. .|++.|++++++...++.+
T Consensus 107 ~~i~~~sG-s~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~-g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~ 177 (401)
T 1fc4_A 107 DAILYSSC-FDANGGLFETLLGAEDAIISDALNHASIIDGVRLC-KAKRYRYAN-------NDMQELEARLKEAREAGAR 177 (401)
T ss_dssp EEEEESCH-HHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTS-CSEEEEECT-------TCHHHHHHHHHHHHHTTCS
T ss_pred cEEEeCCh-HHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHc-CCceEEECC-------CCHHHHHHHHHHhhccCCC
Confidence 56666665 66888899999999999999999998888887765 999998873 4789999998764333336
Q ss_pred eeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccc-cCcc-CCCCCcchHHHhhhhccccCCCeEEEEecCc
Q 011570 200 IKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYA-ATVF-TKESSFVSIAEIIDQDIACNRNLIHIVYSLS 277 (483)
Q Consensus 200 ~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~-~~~~-~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~S 277 (483)
+++|++++||||||.+++ +++|+++|+++|++||+||+|+ ++.+ .+ ..+.+...+ ..+.+++++|||
T Consensus 178 ~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g-~~~~~~~~~-------~~~~di~~~s~s 246 (401)
T 1fc4_A 178 HVLIATDGVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENG-RGSHEYCDV-------MGRVDIITGTLG 246 (401)
T ss_dssp SEEEEEESEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTS-CCHHHHTTC-------TTCCSEEEEESS
T ss_pred ceEEEEeCCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCC-CccHHHcCC-------CcCCcEEEecch
Confidence 889999999999999999 8888999999999999999995 6532 22 222222222 224578899999
Q ss_pred ccc-CCCCceEEEEEecChHHHHHHHHhh-h---cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 011570 278 KDM-GFPGFRVGIIYSYNDQVVSCARKMS-S---FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ 352 (483)
Q Consensus 278 K~~-g~~GlRiG~li~~~~~l~~~~~~~~-~---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~ 352 (483)
|.+ |.+| ||+++ ++.+.+.+.... . .+.++++++.++.+.++... . .++.+++++++++++.+.|++
T Consensus 247 K~~~~~~g---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~-~~~~~~~~~~~~~~l~~~L~~ 318 (401)
T 1fc4_A 247 KALGGASG---GYTAA-RKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVE---A-GSELRDRLWANARQFREQMSA 318 (401)
T ss_dssp STTCSSSC---EEEEE-CHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHH---T-CHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCCC---EEEEc-CHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHh---c-CHHHHHHHHHHHHHHHHHHHH
Confidence 999 6555 99999 566666655432 1 23567888888777664321 1 355677788889999999998
Q ss_pred CCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC-CCCEEEEEecc-CCHHHHHHHHHHH
Q 011570 353 VGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP-NPGWFRVCFAN-MDDRTMEIALSRI 430 (483)
Q Consensus 353 ~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~-~~~~iRis~~~-~~~e~l~~~l~~L 430 (483)
.|+++.+ ..++|+|++++... ...++.+.|.++ ||.+.+|..|+.+ ..+++||+++. .+++++++++++|
T Consensus 319 ~g~~~~~-~~~~~~~~~~~~~~------~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l 390 (401)
T 1fc4_A 319 AGFTLAG-ADHAIIPVMLGDAV------VAQKFARELQKE-GIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAF 390 (401)
T ss_dssp TTCCBCC-SSSSEEEEEEECHH------HHHHHHHHHHHT-TEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHH
T ss_pred cCCcccC-CCCCEEEEEcCChH------HHHHHHHHHHHC-CcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 8888774 45678999986421 233677777754 9999999877643 34689999975 5999999999999
Q ss_pred HHHHHHh
Q 011570 431 TSFMLKN 437 (483)
Q Consensus 431 ~~~l~~~ 437 (483)
++++++.
T Consensus 391 ~~~~~~~ 397 (401)
T 1fc4_A 391 TRIGKQL 397 (401)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9998765
No 85
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=1.4e-33 Score=285.09 Aligned_cols=298 Identities=13% Similarity=0.123 Sum_probs=234.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCC-cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC--hHHHHhhhcCcEEEEee
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPD-RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPG--FDRDLRWRTGVQLVPVV 172 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~--~~~~~~~~~G~~~~~v~ 172 (483)
..++++++++++.+.+| ++++ +|++|+|+++++..++.+++++||+|+++.|+|+. +...++.. |.+++.++
T Consensus 65 ~~~~~~~~~~~la~~~g----~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~-g~~~~~v~ 139 (393)
T 1vjo_A 65 FLALMDEIQSLLRYVWQ----TENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGNRLVDMAGRY-GADVRTIS 139 (393)
T ss_dssp HHHHHHHHHHHHHHHHT----CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhC----CCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCChhHHHHHHHHHHc-CCceEEEe
Confidence 56788888888888777 4677 99999999999999999999999999999999998 88877775 99999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
+++ ++.+|++.|++++++. ++++|++++|+||||.+++ +++|+++|+++|++||+||+|. ++. .+
T Consensus 140 ~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~---~g~-~~- 204 (393)
T 1vjo_A 140 KPW--GEVFSLEELRTALETH-----RPAILALVHAETSTGARQP---LEGVGELCREFGTLLLVDTVTS---LGG-VP- 204 (393)
T ss_dssp CCT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHHTCEEEEECTTT---TTT-SC-
T ss_pred cCC--CCCCCHHHHHHHHhhC-----CceEEEEeccCCCcceecc---HHHHHHHHHHcCCEEEEECCcc---ccC-cC-
Confidence 875 4679999999999752 5789999999999999998 7888999999999999999998 332 21
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh---------------------hhcC-CC
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM---------------------SSFG-LV 310 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~---------------------~~~~-~~ 310 (483)
.++. ..+.++++.|+||.++.+| |+||++++ +.+.+.+... ...+ ..
T Consensus 205 ~~~~---------~~~~di~~~s~sK~l~~~~-~~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 273 (393)
T 1vjo_A 205 IFLD---------AWGVDLAYSCSQKGLGCSP-GASPFTMS-SRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTA 273 (393)
T ss_dssp CCTT---------TTTCSEEECCSSSTTCSCS-SCEEEEEC-HHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCC
T ss_pred Cccc---------ccCccEEEEcCcccccCCC-ceEEEEEC-HHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCC
Confidence 1211 2356788999999998777 99999994 5555544221 1112 56
Q ss_pred ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCc---eEEEeeecCchhhccChHHHHHHHH
Q 011570 311 SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNA---GLFLWMDLHHLLKEQTYEAEMALWR 387 (483)
Q Consensus 311 s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~---g~f~~~~l~~~~~~~~~~~~~~~~~ 387 (483)
+.++|.++..++... .+.++++.+++++++++++.+.|++.|+++..+.+ +.++++.++...+ ..++++
T Consensus 274 ~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 345 (393)
T 1vjo_A 274 PINLYYALREALRLI--AQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDGVD------GKAVAR 345 (393)
T ss_dssp CHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTTCC------HHHHHH
T ss_pred CHHHHHHHHHHHHHH--HHccHHHHHHHHHHHHHHHHHHHHHcCCcccCCccccCCcEEEEEcCCCCC------HHHHHH
Confidence 778888887777542 12346777888999999999999988888877654 3577888764221 236788
Q ss_pred HHHHhcCeEeeCCCCCCCCCCCEEEEEe-cc-CCHHHHHHHHHHHHHHH
Q 011570 388 VIINEVKLNVSPGSSFHCPNPGWFRVCF-AN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 388 ~Ll~~~gV~v~pg~~f~~~~~~~iRis~-~~-~~~e~l~~~l~~L~~~l 434 (483)
.|++++||.++||..|. .++++||++ +. .+++++++++++|++++
T Consensus 346 ~l~~~~gi~v~~g~~~~--~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 346 RLLNEHNIEVGGGLGEL--AGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp HHHHHHCEECEECCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred HHHhhCCEEEecCcccc--CCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 88866699999998765 367999994 43 47778999999999875
No 86
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=7.4e-33 Score=278.71 Aligned_cols=303 Identities=15% Similarity=0.147 Sum_probs=236.8
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC--hHHHHhhhcCcEEEEeec
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPG--FDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~--~~~~~~~~~G~~~~~v~~ 173 (483)
..++++++++++.+.+| .+ +++++++|+|+++++..++.+++++||+|+++.|+|++ +...+... |.+++.++.
T Consensus 51 ~~~~~~~~~~~la~~~g--~~-~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~-g~~~~~v~~ 126 (386)
T 2dr1_A 51 YRKVHMDTVERLREFLE--VE-KGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKRYKEVVESN-GRKAVVLEY 126 (386)
T ss_dssp HHHHHHHHHHHHHHHHT--CS-SSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEESSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHhC--CC-CCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCchhHHHHHHHHHh-CCceEEEec
Confidence 37788888888888777 22 36789999999999999999999999999999999987 77777775 999999998
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcc
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFV 253 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~ 253 (483)
+. ++.+|+++|++++++ ++++++|++++|+||||.+.+ +++|+++|+++|++||+||+|+.+.+. .
T Consensus 127 ~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~-----~ 192 (386)
T 2dr1_A 127 EP--GKAVKPEDLDDALRK----NPDVEAVTITYNETSTGVLNP---LPELAKVAKEHDKLVFVDAVSAMGGAD-----I 192 (386)
T ss_dssp CT--TCCCCHHHHHHHHHH----CTTCCEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTBTTBC-----C
T ss_pred CC--CCCCCHHHHHHHHhc----CCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcCCeEEEEccccccCcc-----c
Confidence 75 567999999999864 237899999999999999998 788899999999999999999854321 1
Q ss_pred hHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHH----------------HHh----hhcCCCChH
Q 011570 254 SIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCA----------------RKM----SSFGLVSSQ 313 (483)
Q Consensus 254 s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~----------------~~~----~~~~~~s~~ 313 (483)
++. ..+.++++.|+||.++.+ .++||++++ +.+.+.+ ... ...++.+.+
T Consensus 193 ~~~---------~~~~di~~~s~sK~~~~~-~g~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (386)
T 2dr1_A 193 KFD---------KWGLDVVFSSSQKAFGVP-PGLAIGAFS-ERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMP 261 (386)
T ss_dssp CTT---------TTTCSEEEEETTSTTCCC-SSCEEEEEC-HHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHH
T ss_pred ccc---------ccCCcEEEEeccccccCC-CceEEEEEC-HHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHH
Confidence 211 235678899999999865 248999995 5554433 111 223456777
Q ss_pred HHHHHHHhcCChhHHHHH--HHHHHHHHHHHHHHHHHhhhcCCceeecCC---ceEEEeeecCchhhccChHHHHHHHHH
Q 011570 314 TQHLIATMLSDDQFVEKF--IAESAKRIAERHKAFTWGLSQVGIGCLKSN---AGLFLWMDLHHLLKEQTYEAEMALWRV 388 (483)
Q Consensus 314 ~q~~~~~~l~~~~~~~~~--~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~---~g~f~~~~l~~~~~~~~~~~~~~~~~~ 388 (483)
.|.++..++.. +.+. +++.+++++++++++.+.|+++|+++..+. .+.++|++++...+ ..++.+.
T Consensus 262 ~~~a~~~~l~~---~~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 332 (386)
T 2dr1_A 262 QVFGINVALRI---IEKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPGHESPTITAVLTPPGIK------GDEVYEA 332 (386)
T ss_dssp HHHHHHHHHHH---HHHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTTCBCSSEEEEECCTTCC------HHHHHHH
T ss_pred HHHHHHHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeeCcCccccCCceEEEEcCCCCC------HHHHHHH
Confidence 88887777643 2222 567778889999999999998888877664 36789999874221 2367788
Q ss_pred HHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 389 IINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 389 Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
|+++ ||.+.||..+. .++++||+++. .+++++++++++|++++++...
T Consensus 333 l~~~-gi~v~~~~~~~--~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 381 (386)
T 2dr1_A 333 MRKR-GFELAKGYGSV--KEKTFRIGHMGYMKFEDIQEMLDNLREVINELKK 381 (386)
T ss_dssp HHHT-TEECEECCGGG--TTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHC-CeEEecCcccc--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 8766 99999998653 45799999986 5999999999999999887643
No 87
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=1.1e-32 Score=277.65 Aligned_cols=335 Identities=10% Similarity=0.073 Sum_probs=238.4
Q ss_pred CCCcccccchhh-hh-cHHHHHHHHhcCCCCccccccccccccccccC--CCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 45 PNGVIQMGLAEN-LL-CHELVEDWLMNNPKASICSAEGLNEFKGIAIF--QDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 45 ~~~~i~l~~~~n-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y--~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
+..+|||+.+++ .+ +++.+.+++.+.... .+. ......| +...+..+||++++++++ + ++
T Consensus 38 g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~-----~~~--~~~~~~~~~g~~~~~~~l~~~la~~~g--------~-~~ 101 (384)
T 1bs0_A 38 DRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQ-----FGI--GSGGSGHVSGYSVVHQALEEELAEWLG--------Y-SR 101 (384)
T ss_dssp TEEEEECSCCCTTSGGGCHHHHHHHHHHHHH-----HCS--CCCSBTTTTCCCHHHHHHHHHHHHHHT--------C-SE
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHH-----hCC--CCCCcCcccCChHHHHHHHHHHHHHhC--------C-Cc
Confidence 346789999876 32 334444444331000 000 0011223 344567899999999985 2 25
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
.|++++| ++++..++.+++++||.|+++.|+|+.+...++.. |.+++.+|. .|++.|++++++. ..++
T Consensus 102 ~i~~~sG-t~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~-g~~~~~~~~-------~d~~~l~~~l~~~---~~~~ 169 (384)
T 1bs0_A 102 ALLFISG-FAANQAVIAAMMAKEDRIAADRLSHASLLEAASLS-PSQLRRFAH-------NDVTHLARLLASP---CPGQ 169 (384)
T ss_dssp EEEESCH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTS-SSEEEEECT-------TCHHHHHHHHHSC---CSSC
T ss_pred EEEeCCc-HHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHc-CCCEEEeCC-------CCHHHHHHHHHhc---CCCC
Confidence 5666665 89999999999999999999999999998888875 999999873 4788999888641 1136
Q ss_pred eEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCcccc
Q 011570 201 KGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDM 280 (483)
Q Consensus 201 ~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~ 280 (483)
++|++++||||||.+++ +++|+++|+++|++||+||+|+.+.+.. .. .++..... ....++++||||.+
T Consensus 170 ~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~-~~-~~~~~~~~------~~~di~~~s~sK~~ 238 (384)
T 1bs0_A 170 QMVVTEGVFSMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGE-QG-RGSCWLQK------VKPELLVVTFGKGF 238 (384)
T ss_dssp EEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSG-GG-CCHHHHTT------CCCSEEEEESSSTT
T ss_pred eEEEEeCCCCCCCCccC---HHHHHHHHHHcCcEEEEECCcccceecC-CC-CchHHhcC------CCCcEEEeeccchh
Confidence 88899999999999999 7888999999999999999998654431 11 12222211 12348899999999
Q ss_pred CCCCceEEEEEecChHHHHHHHHhh-hc---CCCChHHHHHHHHhcCChhHHHH-HHHHHHHHHHHHHHHHHHhhhcCCc
Q 011570 281 GFPGFRVGIIYSYNDQVVSCARKMS-SF---GLVSSQTQHLIATMLSDDQFVEK-FIAESAKRIAERHKAFTWGLSQVGI 355 (483)
Q Consensus 281 g~~GlRiG~li~~~~~l~~~~~~~~-~~---~~~s~~~q~~~~~~l~~~~~~~~-~~~~~~~~l~~~~~~l~~~L~~~gi 355 (483)
|++| ||+++ ++.+.+.+.... .+ ...+++.+.++.+.++.. .+ +.++.+++++++++++.+.|+++|+
T Consensus 239 ~~~G---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 311 (384)
T 1bs0_A 239 GVSG---AAVLC-SSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVI---RSDEGDARREKLAALITRFRAGVQDLPF 311 (384)
T ss_dssp SSCC---EEEEE-CHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH---HSHHHHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred hccC---cEEEe-CHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9777 99999 466666554432 22 246777777766666432 21 3567778889999999999999898
Q ss_pred eeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC-CCCEEEEEecc-CCHHHHHHHHHHHHHH
Q 011570 356 GCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP-NPGWFRVCFAN-MDDRTMEIALSRITSF 433 (483)
Q Consensus 356 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~-~~~~iRis~~~-~~~e~l~~~l~~L~~~ 433 (483)
++.+ .++.|+|++++... ...++.+.|+++ ||.+.+|..|+.. +.+++||+++. .+++++++++++|+++
T Consensus 312 ~~~~-~~~~~~~~~~~~~~------~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 312 TLAD-SCSAIQPLIVGDNS------RALQLAEKLRQQ-GCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp EECS-CCSSBCCEEEESHH------HHHHHHHHHHHT-TEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred cccC-CCCCEEEEEeCCHH------HHHHHHHHHHHC-CcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 8775 44567888886421 233677777765 9999999877532 34789999985 4899999999999864
No 88
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=4.7e-33 Score=279.82 Aligned_cols=301 Identities=18% Similarity=0.184 Sum_probs=225.4
Q ss_pred CCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc----CCCCeEEEeCCCCcChHHHH---hhhc
Q 011570 92 DYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA----DPGDAFLVPTPYYPGFDRDL---RWRT 164 (483)
Q Consensus 92 ~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~----~~gd~Vlv~~P~y~~~~~~~---~~~~ 164 (483)
...+..++++.++++++ +++++|++|+|+++++..++.++. ++||+|+++.|+|+.+...+ +..
T Consensus 42 ~~~~~~~l~~~la~~~g--------~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~- 112 (384)
T 1eg5_A 42 ANLHMEKAREKVAKVLG--------VSPSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMK- 112 (384)
T ss_dssp HHHHHHHHHHHHHHHHT--------SCGGGEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHcC--------CCCCeEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhc-
Confidence 34556889999999986 467899999999999999999997 89999999999999886665 454
Q ss_pred CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcC--cEEEEccccc
Q 011570 165 GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKN--IHLVCDEIYA 242 (483)
Q Consensus 165 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~--~~iI~Deay~ 242 (483)
|.+++.+++++ ++.+|++.|++++.+ ++++|++++|+||||.+++ +++|.++|+++| ++||+||+|+
T Consensus 113 g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~ 181 (384)
T 1eg5_A 113 GFKVKYVPVDS--RGVVKLEELEKLVDE------DTFLVSIMAANNEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQT 181 (384)
T ss_dssp TCEEEECCBCT--TSCBCHHHHHHHCCT------TEEEEEEESBCTTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTT
T ss_pred CCEEEEEccCC--CCccCHHHHHHHhCC------CCeEEEEECCCCCcccccC---HHHHHHHHHhcCCceEEEEEhhhh
Confidence 99999999864 467999999998853 7899999999999999999 688888899999 9999999997
Q ss_pred cCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChH-HHHHHHH-----hhhcCCCChHHHH
Q 011570 243 ATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQ-VVSCARK-----MSSFGLVSSQTQH 316 (483)
Q Consensus 243 ~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~-l~~~~~~-----~~~~~~~s~~~q~ 316 (483)
|.. .. .++. ..+.++++.|+||.+|++| +||++++++. +...+.. ....+..+.+.+.
T Consensus 182 ---~~~-~~-~~~~---------~~~~di~~~s~sK~~g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (384)
T 1eg5_A 182 ---IGK-IP-FSLE---------KLEVDYASFSAHKFHGPKG--VGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIV 245 (384)
T ss_dssp ---TTT-SC-CCCT---------TTCCSEEEEEGGGGTSCTT--CEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHHH
T ss_pred ---cCC-cc-cCch---------hcCCCEEEecHHHhcCCCc--eEEEEEcCCCccccccccCcccccccCCCCChHHHH
Confidence 333 21 1211 1245688999999999888 7999996542 1221111 0122457788888
Q ss_pred HHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC-c--eEEEeeecCchhhccChHHHHHHHHHHHHhc
Q 011570 317 LIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN-A--GLFLWMDLHHLLKEQTYEAEMALWRVIINEV 393 (483)
Q Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~-~--g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~ 393 (483)
++..++... .+++++.+++++++++++.+.|.+.|+++..+. + +.++++.++.. + ..++.+.|. ++
T Consensus 246 a~~~al~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~l~-~~ 314 (384)
T 1eg5_A 246 GAARAMEIA---VEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNI-R------GSTLQNLLS-GY 314 (384)
T ss_dssp HHHHHHHHH---HHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTTC-C------HHHHHHHHH-HT
T ss_pred HHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHhCCCCeEEeCCcccCCCCEEEEEeCCC-C------HHHHHHHHh-hC
Confidence 877777541 345677888889999999999988888876542 1 24667777631 1 236676665 67
Q ss_pred CeEeeCCCCCCCC-----------------CCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 394 KLNVSPGSSFHCP-----------------NPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 394 gV~v~pg~~f~~~-----------------~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
||.+.+|..|+.. .++++||+++. .+++++++++++|++++++.++
T Consensus 315 gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 378 (384)
T 1eg5_A 315 GIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFLDL 378 (384)
T ss_dssp TEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC--
T ss_pred CeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999877532 13689999985 5999999999999999887643
No 89
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=1.2e-32 Score=280.28 Aligned_cols=340 Identities=16% Similarity=0.188 Sum_probs=241.7
Q ss_pred CCcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCC--CCCcHHHHHHHHHHHHhhhCCCCCc-CCCcE
Q 011570 46 NGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQD--YHGLPEFRNAVAKFMGKVRGNRITF-DPDRI 122 (483)
Q Consensus 46 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~Lr~~ia~~~~~~~g~~~~~-~~~~i 122 (483)
.++++|+.+++..+++.+.+++.+.... ...........|++ ..+..++|++++++++ . ++++|
T Consensus 27 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~--------~~~~~~v 93 (420)
T 1t3i_A 27 HPLVYLDNAATSQKPRAVLEKLMHYYEN-----DNANVHRGAHQLSVRATDAYEAVRNKVAKFIN--------ARSPREI 93 (420)
T ss_dssp EECEECBTTTCCCCCHHHHHHHHHHHHH-----TCCCC--CCSHHHHHHHHHHHHHHHHHHHHTT--------CSCGGGE
T ss_pred CceEEecCCccCCCCHHHHHHHHHHHHh-----ccCCCCcccchHHHHHHHHHHHHHHHHHHHcC--------CCCCCeE
Confidence 3578999888775455555554431100 00000001234543 3567899999999986 3 57899
Q ss_pred EEeCChhHHHHHHHHHh----cCCCCeEEEeCCCCcC----hHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 123 VMSGGATGAHETVAFCL----ADPGDAFLVPTPYYPG----FDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l----~~~gd~Vlv~~P~y~~----~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
++|+|+++++..++.++ +++||+|+++.|+|+. +...++.. |.+++.+++++ ++.+|++.|++++.+
T Consensus 94 ~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~l~~-- 168 (420)
T 1t3i_A 94 VYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKT-GAVLKFVQLDE--QESFDLEHFKTLLSE-- 168 (420)
T ss_dssp EEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHH-CCEEEEECBCT--TSSBCHHHHHHHCCT--
T ss_pred EEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhc-CcEEEEeccCC--CCCcCHHHHHHhhCC--
Confidence 99999999999999999 8999999999999998 45555555 99999999863 567999999998853
Q ss_pred hcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEe
Q 011570 195 ESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVY 274 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~ 274 (483)
++++|++++|+||||.+++ +++|.++|+++|++||+||+|+.. . .. .++..+ +.++++.
T Consensus 169 ----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~---~-~~-~~~~~~---------~~di~~~ 227 (420)
T 1t3i_A 169 ----KTKLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAP---H-YP-LDVQLI---------DCDWLVA 227 (420)
T ss_dssp ----TEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTT---T-SC-CCHHHH---------TCSEEEE
T ss_pred ----CceEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccC---C-cc-Cchhhc---------CCCEEEE
Confidence 7899999999999999999 888899999999999999999742 1 11 133222 4567889
Q ss_pred cCccccCCCCceEEEEEecChHHHHHHHHhhh---------------------c-CCCChHHHHHHHH-hcCChhHHH-H
Q 011570 275 SLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS---------------------F-GLVSSQTQHLIAT-MLSDDQFVE-K 330 (483)
Q Consensus 275 S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~---------------------~-~~~s~~~q~~~~~-~l~~~~~~~-~ 330 (483)
|+||.+|.+| +||+++ ++.+.+.+..... + ...+++.+.++.. .+.. +. .
T Consensus 228 s~sK~~~~~g--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~ 301 (420)
T 1t3i_A 228 SGHKMCAPTG--IGFLYG-KEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDY---LTDL 301 (420)
T ss_dssp EGGGTTSCTT--CEEEEE-CHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHH---HHHH
T ss_pred ehhhhcCCCc--eEEEEE-chHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHH---HHHh
Confidence 9999998778 899999 4555554432211 1 1244555554332 3321 11 1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcC-CceeecCC------ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCC
Q 011570 331 FIAESAKRIAERHKAFTWGLSQV-GIGCLKSN------AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSF 403 (483)
Q Consensus 331 ~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~------~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f 403 (483)
.+++..++++++++++.+.|++. |+++..+. ++ ++++.++. .+ ..++.+.| .++||.+++|..|
T Consensus 302 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~-~~~~~~~~-~~------~~~~~~~l-~~~gi~v~~~~~~ 372 (420)
T 1t3i_A 302 GMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAA-LASFNVAG-LH------ASDVATMV-DQDGIAIRSGHHC 372 (420)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCS-EEEEEETT-BC------HHHHHHHH-HTTTEECBCSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCC-EEEEEECC-CC------HHHHHHHH-HHCCeEEeecccc
Confidence 34667778888999999999988 88887664 55 55566763 11 22555544 5679999999655
Q ss_pred CC------CCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 404 HC------PNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 404 ~~------~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
.. ..++++||+++. .++++++.++++|+++++..++
T Consensus 373 ~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~~~ 415 (420)
T 1t3i_A 373 TQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFFSD 415 (420)
T ss_dssp CHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHTC-
T ss_pred chHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 21 115789999986 4999999999999999877644
No 90
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=1.7e-32 Score=278.02 Aligned_cols=306 Identities=12% Similarity=0.087 Sum_probs=224.7
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCc
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGV 166 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~ 166 (483)
.|+...+..++|+++|++++ .+++|++|+|++ ++..++.++. .+||.|+++.|+|+.+...++.. |+
T Consensus 86 ~~~~~~~~~~l~~~la~~~~---------~~~~i~~~sG~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~ 154 (401)
T 2bwn_A 86 ISGTTAYHRRLEAEIAGLHQ---------KEAALVFSSAYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRN-AG 154 (401)
T ss_dssp TBCCBHHHHHHHHHHHHHTT---------CSEEEEESCHHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHS-CC
T ss_pred ccCChHHHHHHHHHHHHHhC---------CCcEEEECCcHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHc-CC
Confidence 45655678999999999986 257899988877 6666666553 58999999999999999888875 99
Q ss_pred EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCcc
Q 011570 167 QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVF 246 (483)
Q Consensus 167 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~ 246 (483)
+++.++.+ |++.+++.++.... .++++|++++|+||||.+++ +++|+++|+++|+++|+||+|....|
T Consensus 155 ~~~~v~~~-------d~~~le~~l~~~~~--~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~ 222 (401)
T 2bwn_A 155 PKRIFRHN-------DVAHLRELIAADDP--AAPKLIAFESVYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMY 222 (401)
T ss_dssp CEEEECTT-------CHHHHHHHHHHSCT--TSCEEEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTS
T ss_pred eEEEEcCC-------CHHHHHHHHHhhcc--CCceEEEEecCcCCCCCcCC---HHHHHHHHHHcCCEEEEecccccccc
Confidence 99999864 68889888864210 26899999999999999999 78899999999999999999986555
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh-h--c-CCCChHHHHHHHHhc
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS-S--F-GLVSSQTQHLIATML 322 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~-~--~-~~~s~~~q~~~~~~l 322 (483)
+. .. .++..... + ..+.+++++||||++|++| ||+++ ++.+.+.+.... . + ...+++.+.++.+++
T Consensus 223 ~~-~g-~~~~~~~~-~---~~~~~i~~~s~sK~~~~~G---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al 292 (401)
T 2bwn_A 223 GP-RG-AGVAERDG-L---MHRIDIFNGTLAKAYGVFG---GYIAA-SARMVDAVRSYAPGFIFSTSLPPAIAAGAQASI 292 (401)
T ss_dssp ST-TS-CCHHHHHT-C---GGGCSEEEEESSSTTCSCC---EEEEE-CHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHH
T ss_pred CC-CC-ceeeeccC-c---cccCcEEEeechhhccCCC---CEEec-CHHHHHHHHHhCcCceecCCCCHHHHHHHHHHH
Confidence 43 21 22222111 0 1134688999999999888 99999 566655554322 1 1 224456666555555
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCC
Q 011570 323 SDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSS 402 (483)
Q Consensus 323 ~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~ 402 (483)
..... ..+++.+++++++++++.+.|.+.|+++.++.++ ++|++++... ...++.+.|++++||.+.|+..
T Consensus 293 ~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~~~~~~------~~~~~~~~L~~~~gi~v~~~~~ 363 (401)
T 2bwn_A 293 AFLKT--AEGQKLRDAQQMHAKVLKMRLKALGMPIIDHGSH-IVPVVIGDPV------HTKAVSDMLLSDYGVYVQPINF 363 (401)
T ss_dssp HHHTS--HHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSSS-CEEEECCCHH------HHHHHHHHHHHHHCEECCEECT
T ss_pred HHHHh--cccHHHHHHHHHHHHHHHHHHHHCCCcccCCCCC-eEEEEeCChH------HHHHHHHHHHhcCCEEEeecCC
Confidence 32111 1135667778888899999998888888877776 8899887521 2336778887667999999987
Q ss_pred CCCC-CCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 403 FHCP-NPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 403 f~~~-~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
|+.. +.+++|++++. .+++++++++++|++++++
T Consensus 364 ~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 364 PTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp TTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred CCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 7643 34699999985 5899999999999987654
No 91
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=5.5e-32 Score=276.86 Aligned_cols=308 Identities=14% Similarity=0.156 Sum_probs=225.1
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS 175 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~ 175 (483)
..+|++.++++++ . ++.++++++++++..++.+++++||.|+++.|+|..+...++.. |.+++.++.
T Consensus 111 ~~~l~~~la~~~g--------~--~~~i~~~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~-g~~~~~~~~-- 177 (427)
T 2w8t_A 111 HMEVEQALRDFYG--------T--TGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQG-NAEIVRFRH-- 177 (427)
T ss_dssp HHHHHHHHHHHHT--------C--SEEEEESCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHS-CSEEEEECT--
T ss_pred HHHHHHHHHHHhC--------C--CceEEecCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHc-CCeeEEeCC--
Confidence 4778888888775 2 25555666667899899999999999999999999999988875 999988873
Q ss_pred CCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchH
Q 011570 176 SNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSI 255 (483)
Q Consensus 176 ~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~ 255 (483)
.|++.|++++++.. ..++++|++++|+||||.+++ +++|+++|+++|+++|+||+|..+.+.. . ..++
T Consensus 178 -----~d~~~le~~l~~~~--~~~~~~v~~~~~~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~-~-g~~~ 245 (427)
T 2w8t_A 178 -----NSVEDLDKRLGRLP--KEPAKLVVLEGVYSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGP-N-GRGV 245 (427)
T ss_dssp -----TCHHHHHHHHHTSC--SSSCEEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSST-T-SCCH
T ss_pred -----CCHHHHHHHHHhcc--CCCCeEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCC-C-CCch
Confidence 58999999887421 116899999999999999999 8889999999999999999999876653 2 2333
Q ss_pred HHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh-hhc---CCCChHHHHHHHHhcCChhHHHHH
Q 011570 256 AEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM-SSF---GLVSSQTQHLIATMLSDDQFVEKF 331 (483)
Q Consensus 256 ~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~-~~~---~~~s~~~q~~~~~~l~~~~~~~~~ 331 (483)
..... + ..+.+++++||||.+|++| ||+++++ .+.+.+... ..+ +..++..+.++.+.++... .
T Consensus 246 ~~~~~-~---~~~~di~~~s~sK~~g~~g---G~v~~~~-~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~----~ 313 (427)
T 2w8t_A 246 YEAQG-L---EGQIDFVVGTFSKSVGTVG---GFVVSNH-PKFEAVRLACRPYIFTASLPPSVVATATTSIRKLM----T 313 (427)
T ss_dssp HHHTT-C---TTCCSEEEEESSSTTCSCC---EEEEECC-TTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHT----S
T ss_pred HhhcC-C---CcCCcEEEecchhhhccCC---CEEEeCH-HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHh----c
Confidence 33221 0 2355889999999999887 9999954 444433322 111 2355555555545553211 1
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCceee-cCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC-CCC
Q 011570 332 IAESAKRIAERHKAFTWGLSQVGIGCL-KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP-NPG 409 (483)
Q Consensus 332 ~~~~~~~l~~~~~~l~~~L~~~gi~~~-~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~-~~~ 409 (483)
.++.+++++++++++.+.|++.|+++. ++..+.++|+.++... ...+++..|+++ ||.+.||..|+.+ +.+
T Consensus 314 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~ 386 (427)
T 2w8t_A 314 AHEKRERLWSNARALHGGLKAMGFRLGTETCDSAIVAVMLEDQE------QAAMMWQALLDG-GLYVNMARPPATPAGTF 386 (427)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCEESCSSCCSSEEEEEESSHH------HHHHHHHHHHHT-TEECEEECTTTSCTTCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCCCEEEEEECCHH------HHHHHHHHHHHC-CeEEeeeCCCCCCCCCe
Confidence 356677788888999999988888877 5524568899987421 234678888765 9999999877643 346
Q ss_pred EEEEEecc-CCHHHHHHHHHHHHHHHHHhhhccCccchh
Q 011570 410 WFRVCFAN-MDDRTMEIALSRITSFMLKNVEAKVPNKKK 447 (483)
Q Consensus 410 ~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~~~~~~~~~ 447 (483)
++||+++. .+++++++++++|++++++..+.+.+.++|
T Consensus 387 ~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~~~~~~ 425 (427)
T 2w8t_A 387 LLRCSICAEHTPAQIQTVLGMFQAAGRAVGVIGLEHHHH 425 (427)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHHTCC-------
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHhCccccccccc
Confidence 89999986 599999999999999999988887777665
No 92
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=100.00 E-value=5e-32 Score=269.74 Aligned_cols=336 Identities=15% Similarity=0.136 Sum_probs=239.0
Q ss_pred CcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeC
Q 011570 47 GVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSG 126 (483)
Q Consensus 47 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~ 126 (483)
++++|+.+.+..+++.+.+++.+. ...|+...|..++++++++++.+.+| .++++|++|+
T Consensus 14 ~~i~l~~~~~~~~~~~v~~a~~~~----------------~~~~~~~~g~~~~~~~~~~~l~~~~g----~~~~~v~~~~ 73 (359)
T 1svv_A 14 KPYSFVNDYSVGMHPKILDLMARD----------------NMTQHAGYGQDSHCAKAARLIGELLE----RPDADVHFIS 73 (359)
T ss_dssp -CEECSCSCSSCCCHHHHHHHHHH----------------TTCCCCSTTCSHHHHHHHHHHHHHHT----CTTSEEEEES
T ss_pred eeEEecCCCcCCCCHHHHHHHHHH----------------HhhccccccccHHHHHHHHHHHHHhC----CCCccEEEeC
Confidence 478888877665556666665541 12466667788999999999988877 5788999999
Q ss_pred ChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH--HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHH-HhcCCceeEE
Q 011570 127 GATGAHETVAFCLADPGDAFLVPTPYYPGFDR--DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKA-QESNIRIKGV 203 (483)
Q Consensus 127 G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~-~~~~~~~~~i 203 (483)
|+++++..++.+++++||+|+++.|+|+.+.. .++.. |.+++.++.+ ++.+|++.|++++++. ..++.++++|
T Consensus 74 g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v 149 (359)
T 1svv_A 74 GGTQTNLIACSLALRPWEAVIATQLGHISTHETGAIEAT-GHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLV 149 (359)
T ss_dssp CHHHHHHHHHHHHCCTTEEEEEETTSHHHHSSTTHHHHT-TCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEE
T ss_pred CchHHHHHHHHHHhCCCCEEEEcccchHHHHHHHHHhcC-CCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEE
Confidence 99999999999999999999999999998877 36665 9999999975 5779999999999762 0112248999
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP 283 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (483)
++++| ||||.+++.+++++|+++|+++|+++|+||+|.++.+...........+.. ...++..|.+|..+
T Consensus 150 ~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-------~~d~~~~s~~K~g~-- 219 (359)
T 1svv_A 150 YISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIAR-------LTDMFYIGATKAGG-- 219 (359)
T ss_dssp EEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHH-------HCSEEEEECTTTTC--
T ss_pred EEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhh-------cCCEEEEecccCCC--
Confidence 99999 799999999999999999999999999999995432222011011111111 12256779999744
Q ss_pred CceEEEEEecChHHHHHHHHh---hhc-CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeec
Q 011570 284 GFRVGIIYSYNDQVVSCARKM---SSF-GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLK 359 (483)
Q Consensus 284 GlRiG~li~~~~~l~~~~~~~---~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~ 359 (483)
...+|+++++ +.+.+.+... ... ...+......+..++.+.. .++.+++++++++++.+.|+..|+++..
T Consensus 220 ~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 293 (359)
T 1svv_A 220 MFGEALIILN-DALKPNARHLIKQRGALMAKGWLLGIQFEVLMKDNL-----FFELGAHSNKMAAILKAGLEACGIRLAW 293 (359)
T ss_dssp SSCEEEEECS-GGGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTSTTH-----HHHHHHHHHHHHHHHHHHHHHTTCCBSS
T ss_pred CCceEEEEEc-ccHHHHHHHHHhcCCcccccchhhHHHHHHHHhhhh-----HHHHHHHHHHHHHHHHHHhccCCeEEcc
Confidence 3568999985 4443333322 111 1123233333445566532 3556677788889999988545888887
Q ss_pred CCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 360 SNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 360 ~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
+.+++|+|++++. ++.+.|++++||.+.+.. ...++++||+++. .+++++++++++|++++++
T Consensus 294 ~~~~~~~~~~~~~-----------~~~~~l~~~~gi~v~~~~---~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 294 PSASNQLFPILEN-----------TMIAELNNDFDMYTVEPL---KDGTCIMRLCTSWATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp CCSSSEECBEEEH-----------HHHHHHTTTEECEEEEEE---TTTEEEEEEECCTTCCHHHHHHHHHHHHHC---
T ss_pred CCccceEEEEcCH-----------HHHHHHHHhcCEEEEecc---cCCCceEEEEccCcCCHHHHHHHHHHHHHHHhc
Confidence 7888899987752 567777766699983211 1245689999865 5999999999999987754
No 93
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=1.7e-31 Score=269.64 Aligned_cols=298 Identities=14% Similarity=0.059 Sum_probs=222.0
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChH--HHHhhhcCcEEEEee
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFD--RDLRWRTGVQLVPVV 172 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~--~~~~~~~G~~~~~v~ 172 (483)
+..++|+.++++++ +++++|++|+|+++++..++.+++++||+|+++.|+|+++. ..++.. |.+++.++
T Consensus 43 ~~~~l~~~la~~~g--------~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~-g~~~~~v~ 113 (392)
T 2z9v_A 43 LYEKVVDKAQKAMR--------LSNKPVILHGEPVLGLEAAAASLISPDDVVLNLASGVYGKGFGYWAKRY-SPHLLEIE 113 (392)
T ss_dssp HHHHHHHHHHHHTT--------CSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHH-CSCEEEEE
T ss_pred HHHHHHHHHHHHhC--------CCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHHc-CCceEEee
Confidence 46788888888876 45789999999999999999999999999999999997652 333444 99999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
++++ +.+|++.|++++++ ++++++|++++|+||||.+++ +++|.++|+++|++||+||+|+. .. ..
T Consensus 114 ~~~~--~~~d~~~l~~~l~~----~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~---g~-~~- 179 (392)
T 2z9v_A 114 VPYN--EAIDPQAVADMLKA----HPEITVVSVCHHDTPSGTINP---IDAIGALVSAHGAYLIVDAVSSF---GG-MK- 179 (392)
T ss_dssp CCTT--SCCCHHHHHHHHHH----CTTCCEEEEESEEGGGTEECC---HHHHHHHHHHTTCEEEEECTTTB---TT-BS-
T ss_pred CCCC--CCCCHHHHHHHHhc----CCCCcEEEEeccCCCCceecc---HHHHHHHHHHcCCeEEEEccccc---CC-cc-
Confidence 8753 46899999999864 236899999999999999999 77889999999999999999973 22 11
Q ss_pred chHHHhhhhccccCCCeEEEEecCcccc-CCCCceEEEEEecChHHHHHHHHhh----------------------hcCC
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDM-GFPGFRVGIIYSYNDQVVSCARKMS----------------------SFGL 309 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~li~~~~~l~~~~~~~~----------------------~~~~ 309 (483)
.++.. .+..+++.|+||.+ |.+|+ ||++++ +.+.+.++... ..+.
T Consensus 180 ~~~~~---------~~~d~~~~s~sK~~~~~~g~--G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 247 (392)
T 2z9v_A 180 THPED---------CKADIYVTGPNKCLGAPPGL--TMMGVS-ERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFT 247 (392)
T ss_dssp CCGGG---------GTCSEEEECSSSTTCCCSCC--EEEEEC-HHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSC
T ss_pred ccccc---------ccceEEEecCcccccCCCce--eEEEEC-HHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCC
Confidence 12211 13457889999964 44564 999994 55555443210 1133
Q ss_pred CChHHHHHHHHhcCChhHHHHH-HHHHHHHHHHHHHHHHHhhhcCCceeec-CC---ceEEEeeecCchhhccChHHHHH
Q 011570 310 VSSQTQHLIATMLSDDQFVEKF-IAESAKRIAERHKAFTWGLSQVGIGCLK-SN---AGLFLWMDLHHLLKEQTYEAEMA 384 (483)
Q Consensus 310 ~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~l~~~~~~l~~~L~~~gi~~~~-~~---~g~f~~~~l~~~~~~~~~~~~~~ 384 (483)
.+...+.++.+++.. +.++ +++.+++++++++++.+.|+++|+++.. +. .++++|++++...+ ..+
T Consensus 248 ~~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 318 (392)
T 2z9v_A 248 PSVSEINGLDVALDL---YLNEGPEAVWARHALTAKAMRAGVTAMGLSVWAASDSIASPTTTAVRTPDGVD------EKA 318 (392)
T ss_dssp CCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCTTEEEEECCTTCC------HHH
T ss_pred CCHHHHHHHHHHHHH---HHhccHHHHHHHHHHHHHHHHHHHHHcCCeeccCCccccCCceEEEECCCCCC------HHH
Confidence 444555555455432 2333 5667788888999999999888887766 32 45688898864222 236
Q ss_pred HHHHHHHhcCeEeeCCCCCCCCCCCEEEEEe-c-cCCHHHHHHHHHHHHHHHHHhh
Q 011570 385 LWRVIINEVKLNVSPGSSFHCPNPGWFRVCF-A-NMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 385 ~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~-~-~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+.+.|.+++||.+.+|..+. .++++||++ + ..+++++++++++|++++++.+
T Consensus 319 l~~~L~~~~gi~v~~g~~~~--~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 319 LRQAARARYGVVFSSGRGET--LGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp HHHHHHHHHCEECEECCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhcCCEEEecCCCCC--CCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcC
Confidence 77888766699999998543 467999995 6 5799999999999999987654
No 94
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=8.2e-33 Score=277.03 Aligned_cols=297 Identities=18% Similarity=0.203 Sum_probs=221.0
Q ss_pred CCCCCCcHHHHHH-HHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEE
Q 011570 90 FQDYHGLPEFRNA-VAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQL 168 (483)
Q Consensus 90 Y~~~~g~~~Lr~~-ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~ 168 (483)
|.+..+..++++. ++++++ .+ +|++|+|+++++..++.+++++||+|+++.|+|+.+...++.. |.++
T Consensus 49 ~~~~~~~~~l~~~~la~~~~--------~~--~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~ 117 (371)
T 2e7j_A 49 EIKTPPIHDFIHNQLPKFLG--------CD--VARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERA-GLNI 117 (371)
T ss_dssp ----CCHHHHHHTHHHHHTT--------SS--EEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHT-TCEE
T ss_pred hhHHHHHHHHHHHHHHHHcC--------CC--EEEEeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHc-CCeE
Confidence 4456788999999 999986 23 9999999999999999999999999999999999998888875 9999
Q ss_pred EEee--cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCcc
Q 011570 169 VPVV--CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVF 246 (483)
Q Consensus 169 ~~v~--~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~ 246 (483)
+.++ .++ ++.+|++.|++++++...+ +++++|++++|+||||.+++ +++|+++|+++|++||+||+|+...+
T Consensus 118 ~~v~~~~~~--~~~~d~~~l~~~l~~~~~~-~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~ 191 (371)
T 2e7j_A 118 ALVPKTDYP--DYAITPENFAQTIEETKKR-GEVVLALITYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRM 191 (371)
T ss_dssp EEECCCCTT--TCCCCHHHHHHHHHHHTTT-SCEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTB
T ss_pred EEeecccCC--CCCcCHHHHHHHHHhhccc-CCeEEEEEECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCC
Confidence 9999 654 4789999999999753221 37899999999999999999 68888999999999999999986322
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHH-HHHhhh---------cCCCChHHHH
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSC-ARKMSS---------FGLVSSQTQH 316 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~-~~~~~~---------~~~~s~~~q~ 316 (483)
. .++..+ +..++++|+||.++ +|.|+||++++++ +.+. +..... .+..+...+.
T Consensus 192 ~-----~~~~~~---------~~di~~~s~sK~~~-~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (371)
T 2e7j_A 192 P-----VSLKEI---------GADFIVGSGHKSMA-ASGPIGVMGMKEE-WAEIVLRRSEKYKNKEVELLGCTARGATII 255 (371)
T ss_dssp C-----CCHHHH---------TCSEEEEEHHHHSS-CCSSCEEEEECTT-TTTTTTCBCSSCTTSBGGGTTCCCCSHHHH
T ss_pred C-----CChhhc---------CCCEEEecCCcCCC-CCCCcEEEEEech-hhhhhccccccCcccccccccCCcCHHHHH
Confidence 1 233333 23478999999998 4559999999654 3333 322221 2333444444
Q ss_pred HHHHhcCChhHHHHHHHHHHHHH--HHHHHHHHHhhhcCCceeecCC--ceEEEeeecCchhhccChHHHHHHHHHHHHh
Q 011570 317 LIATMLSDDQFVEKFIAESAKRI--AERHKAFTWGLSQVGIGCLKSN--AGLFLWMDLHHLLKEQTYEAEMALWRVIINE 392 (483)
Q Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~l--~~~~~~l~~~L~~~gi~~~~~~--~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~ 392 (483)
++...+. ++.. +..+++ +++++++.+.|.+.|+++..+. .+.++|++++ + ..++.+.|. +
T Consensus 256 a~~~~l~---~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~l~-~ 319 (371)
T 2e7j_A 256 TLMASFP---HVRE---RIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAE---V------LYEISKKAK-G 319 (371)
T ss_dssp HHHHHHH---HHHH---HGGGHHHHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECH---H------HHHHHHHSS-S
T ss_pred HHHHHHH---HHHH---HHHHHHHHHHHHHHHHHHHHHcCcEEecCCCccCceEEEECC---C------HHHHHHHHH-H
Confidence 4444442 1121 445566 7778888899988888887663 3458999886 1 236677766 6
Q ss_pred cCeEeeCCCCCCC----CCCCEEE-EEecc--CCHHHHHHHHHHHHHHHHH
Q 011570 393 VKLNVSPGSSFHC----PNPGWFR-VCFAN--MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 393 ~gV~v~pg~~f~~----~~~~~iR-is~~~--~~~e~l~~~l~~L~~~l~~ 436 (483)
+||.+.| ..|.. ..++++| ++++. .+++++++++++|++++++
T Consensus 320 ~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~ 369 (371)
T 2e7j_A 320 GRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEK 369 (371)
T ss_dssp GGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHh
Confidence 7999988 43322 1257899 99985 5899999999999998865
No 95
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=1.2e-31 Score=272.16 Aligned_cols=288 Identities=15% Similarity=0.169 Sum_probs=210.5
Q ss_pred ccCCCCCCcH---HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH----HH
Q 011570 88 AIFQDYHGLP---EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR----DL 160 (483)
Q Consensus 88 ~~Y~~~~g~~---~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~----~~ 160 (483)
..|++ .|.+ +|++++|++++ . +++++++|+++++..++.+++++||+|+++.|+|+.+.. .+
T Consensus 54 ~~Y~~-~~~~~~~~l~~~ia~~~g--------~--~~~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~ 122 (404)
T 1e5e_A 54 YIYTR-LGNPTVSNLEGKIAFLEK--------T--EACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHAL 122 (404)
T ss_dssp CCBTT-TCCHHHHHHHHHHHHHHT--------C--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHH
T ss_pred ccccC-CcChHHHHHHHHHHHHhC--------C--CcEEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHH
Confidence 45776 4556 89999999986 2 378888888999999999999999999999999999888 56
Q ss_pred hhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhh-cCcEEEEcc
Q 011570 161 RWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINE-KNIHLVCDE 239 (483)
Q Consensus 161 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~-~~~~iI~De 239 (483)
+.. |++++.++++ |++.|++++++ ++++|++++|+||||.+++ +++|+++|++ +|++||+||
T Consensus 123 ~~~-g~~~~~v~~~-------d~~~l~~~i~~------~t~~v~l~~p~NptG~v~~---l~~i~~la~~~~~~~li~De 185 (404)
T 1e5e_A 123 TKF-GIQVDFINTA-------IPGEVKKHMKP------NTKIVYFETPANPTLKIID---MERVCKDAHSQEGVLVIADN 185 (404)
T ss_dssp HHT-TCEEEEECTT-------STTHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHTSTTCEEEEEC
T ss_pred HHc-CCEEEEECCC-------CHHHHHHhcCC------CCcEEEEECCCCCCCcccC---HHHHHHHHHhhcCCEEEEEC
Confidence 665 9999999864 67888888753 7899999999999999998 8899999999 999999999
Q ss_pred ccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceE-EEEEecChHHHHHHHHhhhc---CCCChHHH
Q 011570 240 IYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRV-GIIYSYNDQVVSCARKMSSF---GLVSSQTQ 315 (483)
Q Consensus 240 ay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRi-G~li~~~~~l~~~~~~~~~~---~~~s~~~q 315 (483)
+|..+.+.. ++ . .++++++.|+||.||++|+|+ ||++++++.+.+.+...... ..++++.|
T Consensus 186 ~~~~~~~~~-----~~-~---------~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~ 250 (404)
T 1e5e_A 186 TFCSPMITN-----PV-D---------FGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISPHDA 250 (404)
T ss_dssp TTTCTTTCC-----GG-G---------GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHH
T ss_pred CCchhhhCC-----cc-c---------cCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHH
Confidence 998754421 11 1 156788999999999999998 99999544444255544333 24677888
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC---------------CceeecCC----ceEEEeeecCchhhc
Q 011570 316 HLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV---------------GIGCLKSN----AGLFLWMDLHHLLKE 376 (483)
Q Consensus 316 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~---------------gi~~~~~~----~g~f~~~~l~~~~~~ 376 (483)
.++...+.... .+.+...++.+.+.+.|++. |+++..++ ++++.| +++..
T Consensus 251 ~~~~~~l~~~~-------~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~-~~~~~--- 319 (404)
T 1e5e_A 251 WLITRGLSTLN-------IRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITF-ILKSG--- 319 (404)
T ss_dssp HHHHHHHTTHH-------HHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEE-EETTH---
T ss_pred HHHHHhHhHHH-------HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEE-EeCCC---
Confidence 88888877532 11222233334444444433 33333333 776666 77641
Q ss_pred cChHHHHHHHHHHHHhcCeEeeCCCCCCC-----------------------CC--CCEEEEEeccCCHHHHHHHHHHHH
Q 011570 377 QTYEAEMALWRVIINEVKLNVSPGSSFHC-----------------------PN--PGWFRVCFANMDDRTMEIALSRIT 431 (483)
Q Consensus 377 ~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~-----------------------~~--~~~iRis~~~~~~e~l~~~l~~L~ 431 (483)
.+....++++.|| +.+|..|+. .+ ++++|||++. |++++++++|+
T Consensus 320 ------~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~---e~~~~li~~l~ 389 (404)
T 1e5e_A 320 ------FEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI---EDADELIADFK 389 (404)
T ss_dssp ------HHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHH
T ss_pred ------HHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHH
Confidence 1234557778899 666665552 12 5799999983 78999999999
Q ss_pred HHHHHhhh
Q 011570 432 SFMLKNVE 439 (483)
Q Consensus 432 ~~l~~~~~ 439 (483)
++++...+
T Consensus 390 ~al~~~~~ 397 (404)
T 1e5e_A 390 QGLDALLR 397 (404)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 98876543
No 96
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=4.8e-32 Score=274.46 Aligned_cols=298 Identities=15% Similarity=0.177 Sum_probs=222.6
Q ss_pred CCCCcHHHHHHHHHHHHhhhCCCCCc-CCCcEEEeCChhHHHHHHHHHh----cCCCCeEEEeCCCCcChH----HHHhh
Q 011570 92 DYHGLPEFRNAVAKFMGKVRGNRITF-DPDRIVMSGGATGAHETVAFCL----ADPGDAFLVPTPYYPGFD----RDLRW 162 (483)
Q Consensus 92 ~~~g~~~Lr~~ia~~~~~~~g~~~~~-~~~~i~it~G~~~al~~~~~~l----~~~gd~Vlv~~P~y~~~~----~~~~~ 162 (483)
...+..++|++++++++ . ++++|++|+|+++++..++.++ +++||+|+++.|+|++.. ..++.
T Consensus 65 ~~~~~~~l~~~la~~~~--------~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~ 136 (406)
T 1kmj_A 65 ATEKMENVRKRASLFIN--------ARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCAR 136 (406)
T ss_dssp HHHHHHHHHHHHHHHTT--------CSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC--------CCCCCeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHh
Confidence 34567899999999976 3 5789999999999999999999 899999999999987643 33455
Q ss_pred hcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccc
Q 011570 163 RTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYA 242 (483)
Q Consensus 163 ~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~ 242 (483)
. |.+++.++.++ ++.+|++.|++++.+ ++++|++++|+||||.+++ +++|+++|+++|++||+||+|.
T Consensus 137 ~-g~~~~~~~~~~--~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~ 204 (406)
T 1kmj_A 137 V-GAELRVIPLNP--DGTLQLETLPTLFDE------KTRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQA 204 (406)
T ss_dssp H-TCEEEEECBCT--TSCBCGGGHHHHCCT------TEEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTT
T ss_pred C-CCEEEEEecCC--CCCcCHHHHHHHhcc------CCeEEEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhh
Confidence 4 99999999874 467899999998853 7899999999999999999 8889999999999999999997
Q ss_pred cCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh----------------
Q 011570 243 ATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS---------------- 306 (483)
Q Consensus 243 ~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~---------------- 306 (483)
.. . .. .++..+ +.++++.|+||.+|.+| +||+++ ++.+.+.+.....
T Consensus 205 ~g---~-~~-~~~~~~---------~~d~~~~s~~K~~g~~G--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (406)
T 1kmj_A 205 VM---H-HP-VDVQAL---------DCDFYVFSGHKLYGPTG--IGILYV-KEALLQEMPPWEGGGSMIATVSLSEGTTW 267 (406)
T ss_dssp TT---T-SC-CCHHHH---------TCSEEEEEGGGTTSCTT--CEEEEE-CHHHHHHCCCSSCSTTSEEEEETTTEEEE
T ss_pred cC---C-CC-Cccccc---------CCCEEEEEchhccCCCC--cEEEEE-eHHHHhhcCCcccCCCceeeccccccccc
Confidence 52 1 11 222222 45688899999999888 899999 4656554432211
Q ss_pred ------c-CCCChHHHHHHH-HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecC--CceEEEeeecCchhh
Q 011570 307 ------F-GLVSSQTQHLIA-TMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKS--NAGLFLWMDLHHLLK 375 (483)
Q Consensus 307 ------~-~~~s~~~q~~~~-~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~--~~g~f~~~~l~~~~~ 375 (483)
+ ...+++.+.++. +++.... ..++++.+++++++++++.+.|+++ |+++..+ .++++. +.++. .+
T Consensus 268 ~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~-~~~~~-~~ 343 (406)
T 1kmj_A 268 TKAPWRFEAGTPNTGGIIGLGAALEYVS--ALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIA-FNLGK-HH 343 (406)
T ss_dssp CCTTGGGCCSSCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEE-EEETT-CC
T ss_pred CCCchhccCCCCCHHHHHHHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEE-EEECC-CC
Confidence 1 113445555433 3332111 1235667778888999999999988 8888877 676555 46652 11
Q ss_pred ccChHHHHHHHHHHHHhcCeEeeCCCCCCC------CCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 376 EQTYEAEMALWRVIINEVKLNVSPGSSFHC------PNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 376 ~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~------~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
..++.+.| .++||.+++|..|.. ..++++||+++. .+++++++++++|+++++..
T Consensus 344 ------~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 344 ------AYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp ------HHHHHHHH-HHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHH-hhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 23566555 466999999986531 125799999986 49999999999999987653
No 97
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=7.8e-32 Score=272.44 Aligned_cols=298 Identities=14% Similarity=0.139 Sum_probs=226.9
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCC-cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChH--HHHhhhcCcEEEEee
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPD-RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFD--RDLRWRTGVQLVPVV 172 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~--~~~~~~~G~~~~~v~ 172 (483)
..++|++++++++ .+++ +|++|+|+++++..++.+++++||+|+++.|+|+.+. ..++.. |++++.++
T Consensus 53 ~~~l~~~la~~~~--------~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-g~~~~~v~ 123 (396)
T 2ch1_A 53 MDEVKDGLRYIFQ--------TENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERY-GADVRTIE 123 (396)
T ss_dssp HHHHHHHHHHHHT--------CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred HHHHHHHHHHHhC--------CCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHHHHHHHHHc-CCceEEec
Confidence 6789999999987 4667 8999999999999999999999999999999999874 355654 99999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
+++ ++.+|+++|++++++. ++++|++++|+||||.+++ +++|+++|+++|++||+||+|. +.. .+
T Consensus 124 ~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~Dea~~---~g~-~~- 188 (396)
T 2ch1_A 124 GPP--DRPFSLETLARAIELH-----QPKCLFLTHGDSSSGLLQP---LEGVGQICHQHDCLLIVDAVAS---LCG-VP- 188 (396)
T ss_dssp CCT--TSCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTT---BTT-BC-
T ss_pred CCC--CCCCCHHHHHHHHHhC-----CCCEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEEcccc---ccC-Cc-
Confidence 864 5679999999999752 5789999999999999999 7888999999999999999997 333 22
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh------------------------h-hc
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM------------------------S-SF 307 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~------------------------~-~~ 307 (483)
.++. ..+..+++.|++|.++ ++.++||++++ +.+.+.+... . ..
T Consensus 189 ~~~~---------~~~~d~~~~s~~K~~~-~~~g~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (396)
T 2ch1_A 189 FYMD---------KWEIDAVYTGAQKVLG-APPGITPISIS-PKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYH 257 (396)
T ss_dssp CCTT---------TTTCCEEECCCC-CCC-CCSSCEEEEEC-HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCC
T ss_pred cchh---------hcCcCEEEEcCCcccc-CCCCeEEEEEC-HHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCC
Confidence 1211 1233466789999765 44456999994 4555444221 0 11
Q ss_pred CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCce----EEEeeecCchhhccChHHHH
Q 011570 308 GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAG----LFLWMDLHHLLKEQTYEAEM 383 (483)
Q Consensus 308 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g----~f~~~~l~~~~~~~~~~~~~ 383 (483)
+..+..+|.++.+++... .+.++++.+++++++++++.+.|+++|+++..+.++ .++|++++...+ ..
T Consensus 258 ~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 329 (396)
T 2ch1_A 258 HTVASNLIFALREALAQI--AEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIPKGVD------WW 329 (396)
T ss_dssp CCCCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTCC------HH
T ss_pred CCCcHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHCCCeeccCCccccCCceEEEEcCCCCC------HH
Confidence 335667777776666531 133466778888999999999998888888777653 478888864222 23
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEe-cc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 384 ALWRVIINEVKLNVSPGSSFHCPNPGWFRVCF-AN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 384 ~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~-~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
++.+.|++++||.+++|..+. .++++||++ +. .+++++++++++|++++++.+
T Consensus 330 ~~~~~L~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~ 384 (396)
T 2ch1_A 330 KVSQYAMNNFSLEVQGGLGPT--FGKAWRVGIMGECSTVQKIQFYLYGFKESLKATH 384 (396)
T ss_dssp HHHHHHHHHHCBCCBCCCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCEEEecCcccc--CCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhC
Confidence 678888877799999987543 467999999 53 489999999999999988764
No 98
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=3.6e-31 Score=269.15 Aligned_cols=298 Identities=15% Similarity=0.182 Sum_probs=218.1
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEE
Q 011570 90 FQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLV 169 (483)
Q Consensus 90 Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~ 169 (483)
|+......++++.++++++ .+..++++++++++..++.+++++||.|+++.|+|+.+...+... |.+++
T Consensus 100 ~g~~~~~~~l~~~la~~~g----------~~~~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~ 168 (409)
T 3kki_A 100 LQNDYDKPMIEKRLAKFTG----------FDECLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYA-NAQAH 168 (409)
T ss_dssp GCSTTTSCHHHHHHHHHHT----------CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHT-TCEEE
T ss_pred cCCcHHHHHHHHHHHHHhC----------CCeEEEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHc-CCeEE
Confidence 3333456788888888875 123444555579999999999999999999999999999888876 99998
Q ss_pred EeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC
Q 011570 170 PVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE 249 (483)
Q Consensus 170 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~ 249 (483)
.++. .|+++|++++.+. ++++|++++|+||||.+++ +++|+++|++||++||+||+|....+..
T Consensus 169 ~~~~-------~d~~~le~~l~~~-----~~~~vi~~~~~nptG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~- 232 (409)
T 3kki_A 169 PFMH-------NNCDHLRMLIQRH-----GPGIIVVDSIYSTLGTIAP---LAELVNISKEFGCALLVDESHSLGTHGP- 232 (409)
T ss_dssp EECT-------TCHHHHHHHHHHH-----CSCEEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSG-
T ss_pred EecC-------CCHHHHHHHHHhc-----CCeEEEECCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCC-
Confidence 8764 5799999999762 5789999999999999999 8889999999999999999998755543
Q ss_pred CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh-hh--c-CCCChHHHHHHHHhcCCh
Q 011570 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM-SS--F-GLVSSQTQHLIATMLSDD 325 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~-~~--~-~~~s~~~q~~~~~~l~~~ 325 (483)
.. ........ . ..+.++++.|+||++|++| ||++++++ +.+.+... .. + ...+++.+.++.+.+..
T Consensus 233 ~g-~~~~~~~~-~---~~~~di~~~s~sK~~~~~g---g~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~- 302 (409)
T 3kki_A 233 NG-AGLLAELG-L---TREVHFMTASLAKTFAYRA---GAIWCNNE-VNRCVPFISYPAIFSSTLLPYEAAGLETTLEI- 302 (409)
T ss_dssp GG-CCHHHHHT-C---GGGCSEEEEESSSTTCSSC---EEEEESSS-GGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHH-
T ss_pred CC-CcchhhcC-C---CCCCCEEEeecchhhCCCc---eEEEECHH-HHHHHHHhCcCccccCCCcHHHHHHHHHHHHH-
Confidence 11 12222211 0 1244588999999999664 99999654 33333221 11 1 23455555555555432
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCC-
Q 011570 326 QFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFH- 404 (483)
Q Consensus 326 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~- 404 (483)
.++ .++.+++++++++++.+.|++.|+++. ..++++|+.++... ...++++.|+++ ||.+.++..+.
T Consensus 303 --~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~~~~~~~~------~~~~~~~~L~~~-Gv~v~~~~~~~~ 370 (409)
T 3kki_A 303 --IES-ADNRRQHLDRMARKLRIGLSQLGLTIR--SESQIIGLETGDER------NTEKVRDYLESN-GVFGSVFCRPAT 370 (409)
T ss_dssp --HHH-CHHHHHHHHHHHHHHHHHHHTTTCCCC--CSSSEEEEEEESHH------HHHHHHHHHHHT-TEECEEECTTSS
T ss_pred --Hhc-CHHHHHHHHHHHHHHHHHHHHcCCccC--CCCCEEEEEeCCHH------HHHHHHHHHHHC-CceEeeeCCCCc
Confidence 222 256677888999999999999888766 35678898887532 233678888766 99998865442
Q ss_pred CCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 405 CPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 405 ~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
..+.+++||+++. .+++++++++++|+++++.
T Consensus 371 ~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 371 SKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence 2345799999975 5899999999999998865
No 99
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=5.2e-33 Score=280.23 Aligned_cols=296 Identities=17% Similarity=0.210 Sum_probs=219.2
Q ss_pred cCCC-CCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHH----Hhh
Q 011570 89 IFQD-YHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRD----LRW 162 (483)
Q Consensus 89 ~Y~~-~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~----~~~ 162 (483)
.|++ ..+..++|++++++++ +++++|++|+|+++++..++.++ +++||+|+++.|+|+.+... ++.
T Consensus 53 ~y~~~~~~~~~l~~~la~~~g--------~~~~~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~ 124 (390)
T 1elu_A 53 ANQHIQQLIAQLRQALAETFN--------VDPNTITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAAR 124 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT--------SCGGGEEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcC--------CCHHHEEEeCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHH
Confidence 4543 3467899999999975 46789999999999999999999 89999999999999987654 344
Q ss_pred hcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHh----hcCcEEEEc
Q 011570 163 RTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFIN----EKNIHLVCD 238 (483)
Q Consensus 163 ~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~----~~~~~iI~D 238 (483)
. |.+++.++++.+.++.+|++.|++++.+ ++++|++++|+||||.+++ +++|.++|+ ++|+++|+|
T Consensus 125 ~-g~~~~~v~~~~~~~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~D 194 (390)
T 1elu_A 125 F-GITYRFFPVAATLNQGDAAAVLANHLGP------KTRLVILSHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVD 194 (390)
T ss_dssp H-CCEEEEECCGGGSSSSCHHHHHHTTCCT------TEEEEEEESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEE
T ss_pred h-CcEEEEEcCCCCCCccchHHHHHHhcCC------CceEEEEeccccCCceecC---HHHHHHHHhhhhhhcCcEEEEE
Confidence 4 9999999986434678999999988753 7899999999999999999 788888888 999999999
Q ss_pred cccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh--------------
Q 011570 239 EIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM-------------- 304 (483)
Q Consensus 239 eay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~-------------- 304 (483)
|+|.. .. .. .++. ....++++.|+||.+ .+|.++||++++++ +.+.+...
T Consensus 195 ea~~~---g~-~~-~~~~---------~~~~d~~~~s~~K~~-~~~~g~G~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~ 258 (390)
T 1elu_A 195 GAQSA---GS-LP-LDFS---------RLEVDYYAFTGHKWF-AGPAGVGGLYIHGD-CLGEINPTYVGWRSITYGAKGE 258 (390)
T ss_dssp CTTTB---TT-BC-CCTT---------TSCCSEEEEESSSTT-CCCTTCEEEEECTT-TGGGCCCCSCCTTTEEECTTSC
T ss_pred ccccc---CC-cC-CChh---------hcCCCEEEccccccc-cCCCceEEEEECHH-hHhhcCCccccCCcccccccCc
Confidence 99973 22 11 1111 224568899999944 35677999999643 43332210
Q ss_pred ----------hhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceeec---CCceEEEeeec
Q 011570 305 ----------SSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLK---SNAGLFLWMDL 370 (483)
Q Consensus 305 ----------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~---~~~g~f~~~~l 370 (483)
...+..+.+.+.++..++..... ..++++.+++++++++++.+.|+++ |+++.. +.+++ +++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~-~~~~~ 336 (390)
T 1elu_A 259 PTGWAEGGKRFEVATSAYPQYAGLLAALQLHQR-QGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGL-VSFTV 336 (390)
T ss_dssp EEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSE-EEEEE
T ss_pred ccccccchHhhCCCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccE-EEEEc
Confidence 11244566666665555432110 1135677788899999999999987 888773 45664 44588
Q ss_pred CchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHH
Q 011570 371 HHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITS 432 (483)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~ 432 (483)
+...+ ..++.+.|. ++||.+++|. .++++||+++. .+++++++++++|++
T Consensus 337 ~~~~~------~~~~~~~l~-~~gi~v~~~~-----~~~~iRis~~~~~~~~~i~~~~~~l~~ 387 (390)
T 1elu_A 337 DSPLG------HRAIVQKLE-EQRIYLRTIA-----DPDCIRACCHYITDEEEINHLLARLAD 387 (390)
T ss_dssp CSSSC------HHHHHHHHH-HTTEECEEET-----TTTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred CCCCC------HHHHHHHHH-HCCEEEEecC-----CCCeEEEecccCCCHHHHHHHHHHHHh
Confidence 63221 236777775 5699999986 35799999954 699999999999865
No 100
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=1.1e-31 Score=271.16 Aligned_cols=299 Identities=12% Similarity=0.114 Sum_probs=224.6
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCC-cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChH--HHHhhhcCcEEEEe
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPD-RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFD--RDLRWRTGVQLVPV 171 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~--~~~~~~~G~~~~~v 171 (483)
+..++++.++++++ ++++ +|++|+|+++++..++.+++++||+|+++.|+|+.+. ..++.. |.+++.+
T Consensus 53 ~~~~l~~~la~~~g--------~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-g~~~~~v 123 (393)
T 2huf_A 53 IMDDIKEGVRYLFQ--------TNNIATFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRY-GADVRVV 123 (393)
T ss_dssp HHHHHHHHHHHHHT--------CCCSEEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHT-TCEEEEE
T ss_pred HHHHHHHHHHHHhC--------CCCCcEEEEcCcHHHHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHc-CCeeEEE
Confidence 46788888888876 4555 8999999999999999999999999999999998742 233444 9999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
++++ ++.+|++.|++++++. ++++|++++|+||||.+++ +++|+++|+++|++||+||++. +.. ..
T Consensus 124 ~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~li~D~a~~---~~~-~~ 189 (393)
T 2huf_A 124 KSKV--GQSLSLDEIRDALLIH-----KPSVLFLTQGDSSTGVLQG---LEGVGALCHQHNCLLIVDTVAS---LGG-AP 189 (393)
T ss_dssp ECCT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTT---BTT-BC
T ss_pred eCCC--CCCCCHHHHHHHHhcc-----CCcEEEEEccCCCccccCC---HHHHHHHHHHcCCEEEEEcccc---cCC-CC
Confidence 9865 3578999999998742 6789999999999999999 7889999999999999999986 332 11
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccc-cCCCCceEEEEEecChHHHHHHHHh----hhc-------------------
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKD-MGFPGFRVGIIYSYNDQVVSCARKM----SSF------------------- 307 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~-~g~~GlRiG~li~~~~~l~~~~~~~----~~~------------------- 307 (483)
.++. ..+.++++.|+||. +|++|+ ||++++ +.+.+.+... .++
T Consensus 190 -~~~~---------~~~~d~~~~s~sK~l~g~~G~--G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (393)
T 2huf_A 190 -MFMD---------RWEIDAMYTGSQKVLGAPPGI--TPVSFS-HRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRI 256 (393)
T ss_dssp -CCTT---------TTTCSEEECCSSSTTCCCSSC--EEEEEC-HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCC
T ss_pred -cchh---------hcCccEEEECCCcccccCCCe--EEEEEC-HHHHHHHhhcCCCCceEEEchHHHHhhhccccccCC
Confidence 1211 22466888999997 567887 999994 6666655432 110
Q ss_pred --CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC---ceEEEeeecCchhhccChHHH
Q 011570 308 --GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN---AGLFLWMDLHHLLKEQTYEAE 382 (483)
Q Consensus 308 --~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~---~g~f~~~~l~~~~~~~~~~~~ 382 (483)
+..+..++.++.+++.... ...+++.+++++++++++.+.|+++|+++..+. ++++++++++...+ .
T Consensus 257 ~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~ 328 (393)
T 2huf_A 257 YHHTISSTLLYGLREAIAMAC--EEGLPALIARHEDCAKRLYRGLQDAGFELYADPKDRLSTVTTIKVPQGVD------W 328 (393)
T ss_dssp CSCCCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCTTEEEEECCTTCC------H
T ss_pred CCCCCCHHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCccccCCcEEEEEcCCCCC------H
Confidence 2344555555555553211 122566777888899999999988888877653 34588888863222 2
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEe-cc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 383 MALWRVIINEVKLNVSPGSSFHCPNPGWFRVCF-AN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 383 ~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~-~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
.++.+.|++++||.+++|..|. .++++||++ +. .+++++++++++|++++++.+.
T Consensus 329 ~~~~~~L~~~~gi~v~~g~~~~--~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 329 LKAAQYAMKTYLVEISGGLGPT--AGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKP 385 (393)
T ss_dssp HHHHHHHHHHHCEECBCCCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCEEEecCcccc--cCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 3677888877799999998663 367999999 64 4788999999999999887643
No 101
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=100.00 E-value=5.4e-32 Score=268.76 Aligned_cols=330 Identities=14% Similarity=0.161 Sum_probs=222.8
Q ss_pred CCCcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 45 PNGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
|+.+|+|+.++++++.+.+.+++.+... ....|++..+..+||+++|++++ .+++++
T Consensus 2 ~~~~i~~~~~~~~~p~~~~~~a~~~~~~-------------~~~~y~~~~~~~~l~~~la~~~g----------~~~~~~ 58 (347)
T 1jg8_A 2 PHMMIDLRSDTVTKPTEEMRKAMAQAEV-------------GDDVYGEDPTINELERLAAETFG----------KEAALF 58 (347)
T ss_dssp ---CEECSCGGGCCCCHHHHHHHHTCCC-------------CCGGGTCCHHHHHHHHHHHHHHT----------CSEEEE
T ss_pred CceEEEeccccCCCCCHHHHHHHhcCCC-------------CCcccCCChHHHHHHHHHHHHhC----------CceEEE
Confidence 5678999999999887777777654210 11256666678899999999986 246788
Q ss_pred eCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCcee
Q 011570 125 SGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIK 201 (483)
Q Consensus 125 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 201 (483)
++|+++++.+++.++++|||+|+++.|+|..... .+... |++++.+ .++ ++.+|++++++++++.....++++
T Consensus 59 ~~~gt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~~~v-~~~--~~~~d~~~l~~~i~~~~~~~~~~~ 134 (347)
T 1jg8_A 59 VPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEVGAMAVLS-GVMPHPV-PGK--NGAMDPDDVRKAIRPRNIHFPRTS 134 (347)
T ss_dssp ESCHHHHHHHHHHHHCCTTCEEEEETTCHHHHSSTTHHHHHT-CCEEEEE-CEE--TTEECHHHHHHHSCCSCTTSCCEE
T ss_pred ecCcHHHHHHHHHHhcCCCCEEEEcCcchhhhccccchhhcc-CeEEEEe-cCC--CCccCHHHHHHHhccccccccCce
Confidence 8888999999999999999999999999865332 34444 9999888 432 456899999988752100012689
Q ss_pred EEEEeCCCCCC-cCCCCHHHHHHHHHHHhhcCcEEEEccccccC--ccCCCCCcchHHHhhhhccccCCCeEEEEecCcc
Q 011570 202 GVLITNPSNPL-GTFLDRETLKDIVSFINEKNIHLVCDEIYAAT--VFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSK 278 (483)
Q Consensus 202 ~i~l~~P~NPt-G~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~--~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK 278 (483)
+|++++||||| |.+++.+++++|+++|+++|++||+||+|... .+.+ . +...+.. ..+.+ +.|+||
T Consensus 135 ~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~-~---~~~~~~~-----~~d~~--~~s~sK 203 (347)
T 1jg8_A 135 LIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASG-V---PVKEYAG-----YADSV--MFCLSK 203 (347)
T ss_dssp EEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHC-C---CHHHHHH-----TCSEE--EEESSS
T ss_pred EEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcC-C---ChHHhcc-----cccEE--EEeccc
Confidence 99999999999 99999999999999999999999999987421 1122 1 2233322 23443 348999
Q ss_pred ccCCCCceEEE-EEecChHHHHHHHHhhhc-C---CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 279 DMGFPGFRVGI-IYSYNDQVVSCARKMSSF-G---LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 279 ~~g~~GlRiG~-li~~~~~l~~~~~~~~~~-~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
.+|++ +|| +++ ++.+.+.+...... + ..+...+.++...+.. +.+...+ ..++++.+.+.|+++
T Consensus 204 ~l~~~---~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~-~~~~~~~l~~~L~~~ 272 (347)
T 1jg8_A 204 GLCAP---VGSVVVG-DRDFIERARKARKMLGGGMRQAGVLAAAGIIALTK------MVDRLKE-DHENARFLALKLKEI 272 (347)
T ss_dssp TTCCS---SCEEEEE-CHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHH------SSTTHHH-HHHHHHHHHHHHHHH
T ss_pred ccCCC---ceEEEEc-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHH------HHHHHHH-HHHHHHHHHHHHHhc
Confidence 99743 574 555 56565554433222 1 1233444433333321 1111111 234557777777766
Q ss_pred Cceee-cCCceEEEeeecCc-hhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHH
Q 011570 354 GIGCL-KSNAGLFLWMDLHH-LLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRI 430 (483)
Q Consensus 354 gi~~~-~~~~g~f~~~~l~~-~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L 430 (483)
|+++. .+..++|+|++++. ..+ ..++++.|. ++||.++++. .+++|++++. .+++++++++++|
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~-~~gi~v~~~~------~~~iRl~~~~~~~~e~i~~~~~~l 339 (347)
T 1jg8_A 273 GYSVNPEDVKTNMVILRTDNLKVN------AHGFIEALR-NSGVLANAVS------DTEIRLVTHKDVSRNDIEEALNIF 339 (347)
T ss_dssp TCBCCGGGCCSSEEEEECTTSSSC------HHHHHHHHH-HHTEECEEEE------TTEEEEECCTTSCHHHHHHHHHHH
T ss_pred CceeccCCCcceEEEEEcccccCC------HHHHHHHHH-HCCCEEecCC------CCeEEEEeCCCCCHHHHHHHHHHH
Confidence 76652 33445689999873 111 236778876 4699999752 4689999953 5999999999999
Q ss_pred HHHHHH
Q 011570 431 TSFMLK 436 (483)
Q Consensus 431 ~~~l~~ 436 (483)
++++++
T Consensus 340 ~~~l~~ 345 (347)
T 1jg8_A 340 EKLFRK 345 (347)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998764
No 102
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.4e-31 Score=269.92 Aligned_cols=304 Identities=11% Similarity=0.064 Sum_probs=223.2
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCC-------------CCeEEEeCCCCcChHHHHh
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADP-------------GDAFLVPTPYYPGFDRDLR 161 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~-------------gd~Vlv~~P~y~~~~~~~~ 161 (483)
+..++++++++++.+.+| +++++|++|+|+++++..++.++..+ ||+|+++.|+|+.+...++
T Consensus 66 ~~~~~~~~l~~~la~~~~----~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~ 141 (397)
T 3f9t_A 66 GTKLLEEKAVALLGSLLN----NKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGRE 141 (397)
T ss_dssp HHHHHHHHHHHHHHHHTT----CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhC----CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHH
Confidence 456777777777776655 57889999999999999999998776 9999999999999999998
Q ss_pred hhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccc
Q 011570 162 WRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIY 241 (483)
Q Consensus 162 ~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay 241 (483)
.. |.+++.+|.++ ++.+|++.|++++.+. ++++|++++|+||||.+.+ +++|+++|++||++||+||+|
T Consensus 142 ~~-g~~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~ 210 (397)
T 3f9t_A 142 MM-DLEYIYAPIKE--DYTIDEKFVKDAVEDY-----DVDGIIGIAGTTELGTIDN---IEELSKIAKENNIYIHVDAAF 210 (397)
T ss_dssp HH-TCEEEEECBCT--TSSBCHHHHHHHHHHS-----CCCEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTT
T ss_pred Hc-CceeEEEeeCC--CCcCCHHHHHHHHhhc-----CCeEEEEECCCCCCCCCCC---HHHHHHHHHHhCCeEEEEccc
Confidence 86 99999999875 4689999999999752 6789999999999999988 788899999999999999999
Q ss_pred ccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCC------------
Q 011570 242 AATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGL------------ 309 (483)
Q Consensus 242 ~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~------------ 309 (483)
+.+.+.......++..+........ +..+++.|+||.++ +|+|+||+++.++.+.+.+.....+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (397)
T 3f9t_A 211 GGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGH-CPIPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRV 288 (397)
T ss_dssp GGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTC-CCSSCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCC
T ss_pred cchhhhhcccccccccccccccccc-cCCeEEEccccccC-CCCCceEEEEeCHHHHHhhccCCccccCCCccccccccc
Confidence 8654322010000000000000001 34577889999875 888999999977665544322122211
Q ss_pred -CChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHH
Q 011570 310 -VSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRV 388 (483)
Q Consensus 310 -~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~ 388 (483)
.+..++.++...+.. ..+++..++++++++++.+.|++.|+++..+..+.++|++++. ..++.+.
T Consensus 289 ~~~~~~~~a~~~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~ 354 (397)
T 3f9t_A 289 GFGGACTYAVLRYLGR-----EGQRKIVNECMENTLYLYKKLKENNFKPVIEPILNIVAIEDED---------YKEVCKK 354 (397)
T ss_dssp SHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEEEEECTT---------HHHHHHH
T ss_pred cchHHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHHHCCCEEEcCCCccEEEEEeCC---------HHHHHHH
Confidence 123445555454432 2345666777888899999999888886554555678888764 2266777
Q ss_pred HHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHH
Q 011570 389 IINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFML 435 (483)
Q Consensus 389 Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~ 435 (483)
|.++ ||.+.+|.. ++++||+++. .+++++++++++|+++++
T Consensus 355 l~~~-gi~v~~~~~-----~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 355 LRDR-GIYVSVCNC-----VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp HHHT-TCBCEECSS-----SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred HHhC-CeEEeccCC-----CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 7754 999998863 5799999985 599999999999998764
No 103
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=100.00 E-value=1.2e-31 Score=267.52 Aligned_cols=298 Identities=13% Similarity=0.169 Sum_probs=221.5
Q ss_pred CCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeC-CCCcC-hHHHHhhhcCcEEEEe
Q 011570 94 HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPT-PYYPG-FDRDLRWRTGVQLVPV 171 (483)
Q Consensus 94 ~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~-P~y~~-~~~~~~~~~G~~~~~v 171 (483)
.+..++|++++++++ .+.+++++++|+|+++++..++.+++++||.|++.. |+|+. +...+... |.+++.+
T Consensus 37 ~~~~~l~~~la~~~g------~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~-g~~~~~v 109 (366)
T 1m32_A 37 GVVEQIRQQLTALAT------ASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAGLM-GIAHHAY 109 (366)
T ss_dssp TTHHHHHHHHHHHHC------SSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHH-TCCEEEE
T ss_pred HHHHHHHHHHHHHhC------CCCcCcEEEEecChHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHh-CCceEEE
Confidence 568999999999986 112456899999999999999999999999988776 55654 45556665 9999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
++++ ++.+|++.|++++++ ..++++|++++|+||||.+++ +++|+++|+++|++||+||+|+.. . ..
T Consensus 110 ~~~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~---~-~~ 176 (366)
T 1m32_A 110 DCGE--VARPDVQAIDAILNA----DPTISHIAMVHSETTTGMLNP---IDEVGALAHRYGKTYIVDAMSSFG---G-IP 176 (366)
T ss_dssp ECCT--TSCCCHHHHHHHHHH----CTTCCEEEEESEETTTTEECC---HHHHHHHHHHHTCEEEEECTTTTT---T-SC
T ss_pred eCCC--CCCCCHHHHHHHHhc----CCCeEEEEEecccCCcceecC---HHHHHHHHHHcCCEEEEECCcccc---C-cC
Confidence 9864 457899999999975 225789999999999999999 788899999999999999999742 2 11
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh----------------h--h--cCCCC
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM----------------S--S--FGLVS 311 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~----------------~--~--~~~~s 311 (483)
.++. ..+.++++.|+||.++ ++.++||++++ +.+.+.+... . . .+..+
T Consensus 177 -~~~~---------~~~~di~~~s~~K~~~-~~~g~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (366)
T 1m32_A 177 -MDIA---------ALHIDYLISSANKCIQ-GVPGFAFVIAR-EQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSP 244 (366)
T ss_dssp -CCTT---------TTTCSEEEEESSSTTC-CCSSEEEEEEE-HHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCC
T ss_pred -cccc---------ccCccEEEecCccccc-CCCceEEEEEC-HHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCC
Confidence 1211 1245688999999874 33457999995 4443322111 0 0 13456
Q ss_pred hHHHHHHHHhcCChhHHHHH--HHHHHHHHHHHHHHHHHhhhcCCceeecC---CceEEEeeecCc--hhhccChHHHHH
Q 011570 312 SQTQHLIATMLSDDQFVEKF--IAESAKRIAERHKAFTWGLSQVGIGCLKS---NAGLFLWMDLHH--LLKEQTYEAEMA 384 (483)
Q Consensus 312 ~~~q~~~~~~l~~~~~~~~~--~~~~~~~l~~~~~~l~~~L~~~gi~~~~~---~~g~f~~~~l~~--~~~~~~~~~~~~ 384 (483)
.+++.++.+++.. +.++ +++.+++++++++++.+.|+++|+++..+ .+++++|++++. ..+ ..+
T Consensus 245 ~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 315 (366)
T 1m32_A 245 THTVLAFAQALKE---LAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYR------FSE 315 (366)
T ss_dssp HHHHHHHHHHHHH---HHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTTCC------HHH
T ss_pred HHHHHHHHHHHHH---HHHccCHhHHHHHHHHHHHHHHHHHHHCCCeeccCchhcCceEEEEEcCccCCCC------HHH
Confidence 6666666666542 2333 46677888899999999998888877654 467799999874 211 236
Q ss_pred HHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 385 LWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 385 ~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
+.+.|.++ ||.+.+|..| .++++|++++. .+++++++++++|++++++
T Consensus 316 ~~~~l~~~-gi~v~~~~~~---~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 316 FYRRLKEQ-GFVIYPGKVS---QSDCFRIGNIGEVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp HHHHHHHT-TEECEECCCS---SSCEEEEECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHC-CEEEECCcCC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 77777755 9999999877 36799999986 4899999999999987643
No 104
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=100.00 E-value=1.3e-30 Score=268.78 Aligned_cols=319 Identities=14% Similarity=0.171 Sum_probs=220.7
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCC-cChHHHHhhhcCcE
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYY-PGFDRDLRWRTGVQ 167 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y-~~~~~~~~~~~G~~ 167 (483)
.|.+..+..+||+++|++++ .+++++|+|+++++..++.+++++|| +++.|+| +.+...+... |.+
T Consensus 70 ~y~~~~~~~~l~~~la~~~~----------~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~~~~~~-G~~ 136 (456)
T 2ez2_A 70 AYAGSENFYHLERTVQELFG----------FKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTRYHQEKN-GAV 136 (456)
T ss_dssp CSSSCHHHHHHHHHHHHHHC----------CSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHHHHHHHT-TCE
T ss_pred hcccChhHHHHHHHHHHHhC----------CCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhHHHHHHc-CCE
Confidence 57666778999999999985 24899999999999999999999999 8889999 7777777775 999
Q ss_pred EEEeecCCC----C----CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCC-CCcCCCCHHHHHHHHHHHhhcCcEEEEc
Q 011570 168 LVPVVCDSS----N----DFKVTMEALEAAYEKAQESNIRIKGVLITNPSN-PLGTFLDRETLKDIVSFINEKNIHLVCD 238 (483)
Q Consensus 168 ~~~v~~~~~----~----~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~N-PtG~~~~~~~l~~i~~~a~~~~~~iI~D 238 (483)
++.++++++ . +|.+|+++|++++.+.. ..++++|++++|+| |||.+++.+++++|+++|++||++||+|
T Consensus 137 ~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t--~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~D 214 (456)
T 2ez2_A 137 FVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKG--AENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYD 214 (456)
T ss_dssp EEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHC--GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEecccccccccccccccCCCCHHHHHHHHHhcc--ccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEE
Confidence 999988632 1 36899999999997521 02358999999998 9999999999999999999999999999
Q ss_pred ccccc----------CccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc-
Q 011570 239 EIYAA----------TVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF- 307 (483)
Q Consensus 239 eay~~----------~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~- 307 (483)
|+|.. ..+.+ ..+.++..... ....++++ |++|..+ +| |.||++++++.+.+.+......
T Consensus 215 e~~~~g~~~~~~~~~~~~~g-~~~~~~~~~~~-----~~~d~~~~-S~kk~~~-~~-~gG~~~~~~~~~~~~~~~~~~~~ 285 (456)
T 2ez2_A 215 ATRCVENAYFIKEQEQGFEN-KSIAEIVHEMF-----SYADGCTM-SGKKDCL-VN-IGGFLCMNDDEMFSSAKELVVVY 285 (456)
T ss_dssp CTTHHHHHHHHHHHSTTCTT-SCHHHHHHHHH-----TTCSEEEE-ETTTTTC-CS-SCEEEEESCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccCC-cchhhhhhhhc-----ccCCEEEE-eCcccCC-CC-ceeEEEECCHHHHHHHHHHHhhc
Confidence 99975 33443 22111111111 12345544 7888765 77 7899998666666655443221
Q ss_pred ------CCCChHHHHH-HHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCc---hhhcc
Q 011570 308 ------GLVSSQTQHL-IATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHH---LLKEQ 377 (483)
Q Consensus 308 ------~~~s~~~q~~-~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~---~~~~~ 377 (483)
...++....+ +..++ +.+. +...++..+..+++.+.|.+.|+++..|.+++++|++++. ..+..
T Consensus 286 ~~~~~~~~~~~~~~~a~a~~~~---~~~~---~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~ 359 (456)
T 2ez2_A 286 EGMPSYGGLAGRDMEAMAIGLR---EAMQ---YEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLTQD 359 (456)
T ss_dssp TCCTTTTTCCHHHHHHHHHHHH---HHTC---HHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEEHHHHTTTSCGG
T ss_pred cCcccccCcchhHHHHHHHHHH---HHhH---HHHHHHHHHHHHHHHHHHhcCCCccccCCCceEEEEEhHHhcCCCChh
Confidence 1223332222 22222 1110 1222333444567777777778888778888999998742 11222
Q ss_pred ChHHHHHHHHHHHHhcCeEeeC-CCCCC----------CCCCCEEEEEecc--CCHHHHHHHHHHHHHHHHHhh
Q 011570 378 TYEAEMALWRVIINEVKLNVSP-GSSFH----------CPNPGWFRVCFAN--MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 378 ~~~~~~~~~~~Ll~~~gV~v~p-g~~f~----------~~~~~~iRis~~~--~~~e~l~~~l~~L~~~l~~~~ 438 (483)
.+. ...++..|++++||.+.+ |..|. ....+++||+++. .+++++++++++|++++++..
T Consensus 360 ~~~-~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 360 EFP-AQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp GCH-HHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred hcc-HHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 111 224467776677998766 44331 1124689999975 589999999999999987643
No 105
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=7.3e-31 Score=263.78 Aligned_cols=296 Identities=19% Similarity=0.192 Sum_probs=221.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCC--CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC--hHHHHhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDP--DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPG--FDRDLRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~--~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~--~~~~~~~~~G~~~~~v 171 (483)
..++++.++++++ +++ ++|++|+|+++++. ++.+++++||+|+++.|+|.+ +...++.. |.+++.+
T Consensus 37 ~~~~~~~la~~~~--------~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~-g~~~~~v 106 (384)
T 3zrp_A 37 LAYSLKGLRYVMG--------ASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVSNGVFGDRWEQIFKRY-PVNVKVL 106 (384)
T ss_dssp HHHHHHHHHHHHT--------CCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEECSSHHHHHHHHHHTTS-SCEEEEE
T ss_pred HHHHHHHHHHHhC--------CCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEecCCcchHHHHHHHHHc-CCcEEEe
Confidence 4566777777765 344 88999999999999 999999999999999999965 44555554 9999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
++++ ++.+|++.+++++.+. ++++|++++|+||||.+++ +++|.++|++||++||+|++|... . ..
T Consensus 107 ~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~---~-~~ 172 (384)
T 3zrp_A 107 RPSP--GDYVKPGEVEEEVRKS-----EYKLVALTHVETSTGVREP---VKDVINKIRKYVELIVVDGVSSVG---A-EE 172 (384)
T ss_dssp CCST--TCCCCHHHHHHHHHHS-----CEEEEEEESEETTTTEECC---HHHHHHHHGGGEEEEEEECTTTTT---T-SC
T ss_pred cCCC--CCCCCHHHHHHHHHhC-----CCcEEEEeCCCCCCceECc---HHHHHHHHHhcCCEEEEECccccc---C-cc
Confidence 9875 4578999999999752 6899999999999999999 788999999999999999999742 1 11
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHH-------------HHhh----h-------c
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCA-------------RKMS----S-------F 307 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~-------------~~~~----~-------~ 307 (483)
.++. ..+.++++.|+||.++ ++.++||++++ +.+.+.+ .... . .
T Consensus 173 -~~~~---------~~~~d~~~~s~~K~~~-~~~g~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (384)
T 3zrp_A 173 -VKAE---------EWNVDVYLTASQKALG-SAAGLGLLLLS-PKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAY 240 (384)
T ss_dssp -CCTT---------TTTCSEEEEETTSTTC-CCSSEEEEEEC-HHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCC
T ss_pred -cccc---------ccCCCEEEecCccccc-CCCceEEEEEC-HHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCc
Confidence 1111 1245688999999885 34459999995 4443333 1111 0 1
Q ss_pred -CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC----ceEEEeeecCchhhccChHHH
Q 011570 308 -GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN----AGLFLWMDLHHLLKEQTYEAE 382 (483)
Q Consensus 308 -~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~----~g~f~~~~l~~~~~~~~~~~~ 382 (483)
+..+...+.++..++.... ...+++.+++++++++++.+.|+++|+++..+. +++++|+.++. .+ .
T Consensus 241 ~g~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~~------~ 311 (384)
T 3zrp_A 241 FATPPVHVILQLAEAFRLIE--KEGIENRIKRHTMVASAIRAGLEALGLEIVARRPESYSNTVTGVILKV-AD------P 311 (384)
T ss_dssp SSCCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEECSS-SC------H
T ss_pred CCCCCHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHHCCCeEccCcccccCccEEEEECCC-CC------H
Confidence 2455555555545543211 122567788888999999999998888887766 56788898875 21 2
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhhc
Q 011570 383 MALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 383 ~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
.++.+.|.++ ||.+++|..+.. +++||+++. .+++++++++++|++++++.+..
T Consensus 312 ~~~~~~l~~~-gi~v~~g~~~~~---~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~ 366 (384)
T 3zrp_A 312 QKVLAGTVNE-GVEFAPGVHPAF---KYFRIGHMGWVTPNDAIIAISVIERTLRKLGEP 366 (384)
T ss_dssp HHHHHHHHTT-TCCCEECCCTTC---CEEEEECCSSCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHC-CEEEecCCCCCc---CEEEEeccccCCHHHHHHHHHHHHHHHHHcCCC
Confidence 3677777755 999999875432 799999865 58999999999999999887543
No 106
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=7.6e-31 Score=266.38 Aligned_cols=296 Identities=10% Similarity=0.070 Sum_probs=222.6
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCc-EEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC--hHHHHhhhcCcEEEEeec
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDR-IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPG--FDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~-i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~--~~~~~~~~~G~~~~~v~~ 173 (483)
.++++.++++++ .+.++ |++|+|+++++..++.+++++||+|+++.|+|.+ +...++.. |.+++.+++
T Consensus 49 ~~~~~~la~~~~--------~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~-g~~~~~v~~ 119 (411)
T 3nnk_A 49 NEVMALYRGVFR--------TENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHLLCEIARRC-RAEVHTIEV 119 (411)
T ss_dssp HHHHHHHHHHHT--------CCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred HHHHHHHHHHhC--------CCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHHc-CCeEEEEec
Confidence 455555555554 34554 8889999999999999999999999999999976 77777775 999999998
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcc
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFV 253 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~ 253 (483)
++ ++.+|+++|++++++. ++++|++++|+||||.+.+ +++|+++|++||+++|+||++.. .. .+ .
T Consensus 120 ~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~---~~-~~-~ 184 (411)
T 3nnk_A 120 PW--GEVFTPDQVEDAVKRI-----RPRLLLTVQGDTSTTMLQP---LAELGEICRRYDALFYTDATASL---GG-NP-L 184 (411)
T ss_dssp CT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHHTCEEEEECTTTB---TT-BC-C
T ss_pred CC--CCCCCHHHHHHHHhhC-----CCeEEEEeCCCCCcceecc---HHHHHHHHHHcCCEEEEECCccc---CC-cc-c
Confidence 64 5678999999999753 7899999999999999999 77889999999999999999863 22 11 1
Q ss_pred hHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh----------------------------
Q 011570 254 SIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS---------------------------- 305 (483)
Q Consensus 254 s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~---------------------------- 305 (483)
+.. ..+.++++.|+||.++ ++.++||+++ ++.+.+.+....
T Consensus 185 ~~~---------~~~~d~~~~s~~K~l~-~~~g~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~ 253 (411)
T 3nnk_A 185 ETD---------VWGLDAVSAGMQKCLG-GPSGTSPITL-SARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGM 253 (411)
T ss_dssp CTT---------TTTCSEEECCSTTTTC-CCSSEEEEEE-CHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHH
T ss_pred chh---------ccCCcEEEecCccccC-CCCceEEEEE-CHHHHHHHhhcccccccccccccccccCCCCcccccchHH
Confidence 111 1245688899999854 4446899999 455555554322
Q ss_pred ----------hcCCCChHHHHHHHHhcCChhHHHHH-HHHHHHHHHHHHHHHHHhhhcCCceeecCCc---eEEEeeecC
Q 011570 306 ----------SFGLVSSQTQHLIATMLSDDQFVEKF-IAESAKRIAERHKAFTWGLSQVGIGCLKSNA---GLFLWMDLH 371 (483)
Q Consensus 306 ----------~~~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~---g~f~~~~l~ 371 (483)
..+..+..++.++..++.. ..+. +++.+++++++++++.+.|.+.|+++..+.+ ++++++.++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 330 (411)
T 3nnk_A 254 VMDYWGPERLNHHTEATTALFGARECARL---ILQEGLDYGIARHKLHGDALVKGIQAMGLETFGDLKHKMNNVLGVVIP 330 (411)
T ss_dssp HHHHHSTTCCCCSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCSSEEEEECC
T ss_pred HHhhhccccCCCCCCCHHHHHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeCCCcccccccEEEEECC
Confidence 1133455566555555432 2223 5677888899999999999988888776553 578889887
Q ss_pred chhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEe-cc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 372 HLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCF-AN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 372 ~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~-~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
...+ ..++.+.|++++||.+++|.. ...++++||++ +. .+++++++++++|++++++..
T Consensus 331 ~~~~------~~~l~~~l~~~~gi~v~~g~~--~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 331 QGIN------GDQARKLMLEDFGIEIGTSFG--PLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp TTCC------HHHHHHHHHHHHSEEEEECCG--GGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred CCCC------HHHHHHHHHHhcCeEEeCccC--CCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 5322 236788888777999999843 23467999998 65 489999999999999998764
No 107
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=3.4e-31 Score=266.18 Aligned_cols=298 Identities=13% Similarity=0.112 Sum_probs=222.5
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc----CCCCeEEEeCCCCcChHHHHhhh--cCcEE
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA----DPGDAFLVPTPYYPGFDRDLRWR--TGVQL 168 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~----~~gd~Vlv~~P~y~~~~~~~~~~--~G~~~ 168 (483)
+..++++.++++++ +++++|++|+|+++++..++.++. ++||+|+++.|+|+.+...+... .|+++
T Consensus 44 ~~~~l~~~la~~~g--------~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~ 115 (382)
T 4eb5_A 44 AVQEAREKVAKLVN--------GGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEV 115 (382)
T ss_dssp HHHHHHHHHHHHHT--------CTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEE
T ss_pred HHHHHHHHHHHHhC--------CCCCeEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEE
Confidence 35677888888775 467899999999999999999998 89999999999999887766531 49999
Q ss_pred EEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCC
Q 011570 169 VPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTK 248 (483)
Q Consensus 169 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~ 248 (483)
+.+++++ ++.+|+++|++++.+ ++++|++++|+||||.+++ +++|+++|+++|++ |+||+|. +..
T Consensus 116 ~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~-i~D~a~~---~g~ 180 (382)
T 4eb5_A 116 EYIPVGK--YGEVDVSFIDQKLRD------DTILVSVQHANNEIGTIQP---VEEISEVLAGKAAL-HIDATAS---VGQ 180 (382)
T ss_dssp EEECBCT--TSCBCHHHHHHHCCT------TEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSEE-EEECTTT---BTT
T ss_pred EEeccCC--CCccCHHHHHHHhcC------CCeEEEEeccCCCccccCC---HHHHHHHHHHCCCE-EEEcchh---cCC
Confidence 9999875 467999999998853 6899999999999999999 77899999999999 9999997 332
Q ss_pred CCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChH-HHHHHH-----HhhhcCCCChHHHHHHHHhc
Q 011570 249 ESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQ-VVSCAR-----KMSSFGLVSSQTQHLIATML 322 (483)
Q Consensus 249 ~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~-l~~~~~-----~~~~~~~~s~~~q~~~~~~l 322 (483)
.. .++..+ +.++++.|+||.+|.+| +||++++++. +..... .....+..+...+.++..++
T Consensus 181 -~~-~~~~~~---------~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 247 (382)
T 4eb5_A 181 -IE-VDVEKI---------GADMLTISSNDIYGPKG--VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAA 247 (382)
T ss_dssp -BC-CCHHHH---------TCSEEEEETGGGTCCSS--CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHH
T ss_pred -cc-cCcccc---------CCCEEEeehHHhcCCCc--eEEEEEccccccCceecCCCccccccCCCccHHHHHHHHHHH
Confidence 21 233222 34578899999988667 6999986552 211110 01112334555555555554
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCc---eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEee
Q 011570 323 SDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNA---GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVS 398 (483)
Q Consensus 323 ~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~---g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 398 (483)
. ++++.+++.+++++++++++.+.|+++ |+++..+.+ +.++++.++. .+ ..++.+.|. ++||.+.
T Consensus 248 ~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~l~-~~gi~v~ 316 (382)
T 4eb5_A 248 E---ITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSY-IE------GESIVLSLD-MAGIQAS 316 (382)
T ss_dssp H---HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETT-SC------HHHHHHHHH-HHTCBCB
T ss_pred H---HHHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCC-cC------HHHHHHHHH-HCCEEEe
Confidence 3 223346777888899999999999987 888776542 3467787762 11 236777776 5699999
Q ss_pred CCCCCCCC-----------------CCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 399 PGSSFHCP-----------------NPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 399 pg~~f~~~-----------------~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
+|..|... .++++||+++. .+++++++++++|++++++.++
T Consensus 317 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 317 TGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp CCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99865432 25799999985 5899999999999999987764
No 108
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=4.8e-31 Score=264.61 Aligned_cols=296 Identities=14% Similarity=0.117 Sum_probs=213.4
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc----CCCCeEEEeCCCCcChHHHHhhh--cCcEEEEe
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA----DPGDAFLVPTPYYPGFDRDLRWR--TGVQLVPV 171 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~----~~gd~Vlv~~P~y~~~~~~~~~~--~G~~~~~v 171 (483)
++++.++++++ +++++|++|+|+++++..++.++. ++||+|+++.|+|+.+...+... .|++++.+
T Consensus 47 ~~~~~la~~~~--------~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v 118 (382)
T 4hvk_A 47 EAREKVAKLVN--------GGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYI 118 (382)
T ss_dssp HHHHHHHHHTT--------CTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcC--------CCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEe
Confidence 55666666554 567899999999999999999988 99999999999999887765432 49999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
++++ ++.+|+++|++++.+ ++++|++++|+||||.+++ +++|+++|+++|+ ||+|++|.. .. ..
T Consensus 119 ~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~-li~D~a~~~---~~-~~ 182 (382)
T 4hvk_A 119 PVGK--YGEVDVSFIDQKLRD------DTILVSVQHANNEIGTIQP---VEEISEVLAGKAA-LHIDATASV---GQ-IE 182 (382)
T ss_dssp CBCT--TSCBCHHHHHHHCCT------TEEEEECCSBCTTTCBBCC---HHHHHHHHSSSSE-EEEECTTTB---TT-BC
T ss_pred ccCC--CCCcCHHHHHHHhcc------CceEEEEECCCCCceeeCC---HHHHHHHHHHcCE-EEEEhHHhc---CC-CC
Confidence 9874 458999999998863 7899999999999999999 7788999999999 999999863 22 11
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChH-HHHHHH-----HhhhcCCCChHHHHHHHHhcCCh
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQ-VVSCAR-----KMSSFGLVSSQTQHLIATMLSDD 325 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~-l~~~~~-----~~~~~~~~s~~~q~~~~~~l~~~ 325 (483)
.+.... +.++++.|+||.+|.+| +|+++++++. +..... .....+..+...+.++.+++.
T Consensus 183 -~~~~~~---------~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~-- 248 (382)
T 4hvk_A 183 -VDVEKI---------GADMLTISSNDIYGPKG--VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAE-- 248 (382)
T ss_dssp -CCHHHH---------TCSEEEEESGGGTSCTT--CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHH--
T ss_pred -CCchhc---------CCCEEEEeHHHhcCCCc--eEEEEEcCccCcCcccccCCCcCccccCCcCHHHHHHHHHHHH--
Confidence 222222 34578899999888667 6777664432 100000 000123345566666555543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCc---eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCC
Q 011570 326 QFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNA---GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGS 401 (483)
Q Consensus 326 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~---g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~ 401 (483)
+..+++++.+++++++++++.+.|.++ |+++..+.+ +.++++.++.. + ..++.+.|. ++||.+++|.
T Consensus 249 -~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~l~-~~gi~v~~g~ 319 (382)
T 4hvk_A 249 -ITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYI-E------GESIVLSLD-MAGIQASTGS 319 (382)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTC-C------HHHHHHHHH-HTTCBCBCC-
T ss_pred -HHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECCC-C------HHHHHHHHH-HCCEEEeeCC
Confidence 234567788888999999999999987 788776543 23666666531 1 235666665 5699999998
Q ss_pred CCCCCC-----------------CCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhhc
Q 011570 402 SFHCPN-----------------PGWFRVCFAN-MDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 402 ~f~~~~-----------------~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
.|.... ++++||+++. .+++++++++++|++++++.++.
T Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~~ 376 (382)
T 4hvk_A 320 ACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRSM 376 (382)
T ss_dssp -------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 776543 5799999985 58999999999999999877643
No 109
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.98 E-value=8.7e-31 Score=264.07 Aligned_cols=299 Identities=12% Similarity=0.127 Sum_probs=221.2
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCC-CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC--hHHHHhhhcCcEEEEee
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDP-DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPG--FDRDLRWRTGVQLVPVV 172 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~-~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~--~~~~~~~~~G~~~~~v~ 172 (483)
..++++.++++++ .+. ++|++|+|+++++..++.+++++||+|+++.++|.+ +...+... |.+++.++
T Consensus 58 ~~~l~~~la~~~~--------~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-g~~~~~~~ 128 (393)
T 3kgw_A 58 MEEIKQGIQYVFQ--------TRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTNGIWGMRAAEIADRI-GARVHQMI 128 (393)
T ss_dssp HHHHHHHHHHHHT--------CCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred HHHHHHHHHHHhC--------CCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCCchhHHHHHHHHHc-CCceEEEe
Confidence 3456666666654 233 469999999999999999999999999999988752 24555554 99999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
++++ +.+|+++|++++++. ++++|++++||||||.+++ +++|.++|++||++||+||+|.. .. ..
T Consensus 129 ~~~~--~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~---g~-~~- 193 (393)
T 3kgw_A 129 KKPG--EHYTLQEVEEGLAQH-----KPVLLFLVHGESSTGVVQP---LDGFGELCHRYQCLLLVDSVASL---GG-VP- 193 (393)
T ss_dssp CCTT--CCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTT---TT-SC-
T ss_pred CCCC--CCCCHHHHHHHHhhC-----CCcEEEEeccCCcchhhcc---HHHHHHHHHHcCCEEEEECCccc---cC-cc-
Confidence 8753 478999999999753 6899999999999999999 78889999999999999999873 22 11
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh-------------------------c
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS-------------------------F 307 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~-------------------------~ 307 (483)
.+.. ..+..+++.|+||+++ ++.++||+++ ++.+.+.+..... .
T Consensus 194 ~~~~---------~~~~d~~~~s~sK~~~-~~~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (393)
T 3kgw_A 194 IYMD---------QQGIDIMYSSSQKVLN-APPGISLISF-NDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIH 262 (393)
T ss_dssp CCTT---------TTTCCEEEEESSSTTC-CCSSCEEEEE-CHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCC
T ss_pred cchh---------hcCCCEEEecCccccc-CCCceeEEEE-CHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCC
Confidence 1111 1245677889999774 3344899999 5555555543211 1
Q ss_pred CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC----ceEEEeeecCchhhccChHHHH
Q 011570 308 GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN----AGLFLWMDLHHLLKEQTYEAEM 383 (483)
Q Consensus 308 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~----~g~f~~~~l~~~~~~~~~~~~~ 383 (483)
+..+..++.++.+.+.... +..+++..++++++++++.+.|+++|+++..+. .++++|+.++...+ ..
T Consensus 263 ~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 334 (393)
T 3kgw_A 263 HTTPVTSLYCLRESLALIA--EQGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVPAGYN------WR 334 (393)
T ss_dssp CCCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECCTTBC------HH
T ss_pred CCCCHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeCCCCCC------HH
Confidence 2345566666555553211 223577788889999999999999888876433 35678888875322 23
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEe-cc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 384 ALWRVIINEVKLNVSPGSSFHCPNPGWFRVCF-AN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 384 ~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~-~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
++.+.|++++||.+++|..+. .++++||++ +. .+++++++++++|++++++.++
T Consensus 335 ~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~ 390 (393)
T 3kgw_A 335 DIVSYVLDHFSIEISGGLGPT--EERVLRIGLLGYNATTENVDRVAEALREALQHCPK 390 (393)
T ss_dssp HHHHHHHHHHCEECBCCCGGG--TTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCB
T ss_pred HHHHHHHHhCCEEEeCCcccC--CCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhh
Confidence 778888877799999998543 467999998 65 4899999999999999987654
No 110
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.98 E-value=2.4e-31 Score=264.25 Aligned_cols=291 Identities=13% Similarity=0.065 Sum_probs=217.3
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChH--HHHhhhcCcEEEEee
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFD--RDLRWRTGVQLVPVV 172 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~--~~~~~~~G~~~~~v~ 172 (483)
+..++|+.++++++ +++++|++|+|+++++..++.+++++||+|+++.|+|+++. ..++.. |.+++.++
T Consensus 35 ~~~~l~~~la~~~g--------~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-g~~~~~v~ 105 (352)
T 1iug_A 35 VFLKARGLLREAFR--------TEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSERFYEIALEA-GLVVERLD 105 (352)
T ss_dssp HHHHHHHHHHHHHT--------CSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred HHHHHHHHHHHHhC--------CCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCchhHHHHHHHHHc-CCceEEEe
Confidence 45788999999876 45789999999999999999999999999999999998864 333444 99999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc--CcEEEEccccccCccCCCC
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK--NIHLVCDEIYAATVFTKES 250 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~--~~~iI~Deay~~~~~~~~~ 250 (483)
+++ ++.+|++++++ +++++|++++|+||||.+++ +++|.++|+++ |++||+||+|+ ++. .
T Consensus 106 ~~~--~~~~d~~~l~~---------~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~~~li~D~a~~---~~~-~ 167 (352)
T 1iug_A 106 YPY--GDTPRPEDVAK---------EGYAGLLLVHSETSTGALAD---LPALARAFKEKNPEGLVGADMVTS---LLV-G 167 (352)
T ss_dssp CCT--TCCCCTTTSCC---------SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTCEEEEECTTT---BTT-B
T ss_pred CCC--CCCCCHHHHhc---------cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCCCCEEEEECCcc---ccC-c
Confidence 865 34678888765 26889999999999999999 77889999999 99999999997 332 1
Q ss_pred CcchHHHhhhhccccCCCeEEEEecCcccc-CCCCceEEEEEecChHHHHH---------H----HHh---hhcCCCChH
Q 011570 251 SFVSIAEIIDQDIACNRNLIHIVYSLSKDM-GFPGFRVGIIYSYNDQVVSC---------A----RKM---SSFGLVSSQ 313 (483)
Q Consensus 251 ~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~li~~~~~l~~~---------~----~~~---~~~~~~s~~ 313 (483)
. .++.. .+..+++.|+||.+ |.+| +||++++ +.+.+. + ... ...+..+..
T Consensus 168 ~-~~~~~---------~~~d~~~~s~~K~~~~~~g--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (352)
T 1iug_A 168 E-VALEA---------MGVDAAASGSQKGLMCPPG--LGFVALS-PRALERLKPRGYYLDLARELKAQKEGESAWTPAIN 234 (352)
T ss_dssp C-CCSGG---------GTCSEEEEESSSTTCCCSC--EEEEEEC-HHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHH
T ss_pred c-eeccc---------cCeeEEEecCcccccCCCc--eeEEEEC-HHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHH
Confidence 1 12111 13457789999954 4334 8999995 443322 1 111 122445666
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC-ceEEEeeecCchhhccChHHHHHHHHHHHHh
Q 011570 314 TQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN-AGLFLWMDLHHLLKEQTYEAEMALWRVIINE 392 (483)
Q Consensus 314 ~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~-~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~ 392 (483)
.+.++.+++.. +.+++++.+++++++++++.+.|++.|+++..+. .++++|++++...+ ..++.+.|.+
T Consensus 235 ~~~a~~~al~~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~- 304 (352)
T 1iug_A 235 LVLAVAAVLEE---VLPRLEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVAAFYLPEGVP------YARVKEAFAQ- 304 (352)
T ss_dssp HHHHHHHHHHH---HGGGHHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCTTCEEEECCTTCC------HHHHHHHHHT-
T ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCCcccccccCCeEEEEEcCCCCC------HHHHHHHHHH-
Confidence 66666665543 1222567778888999999999988888887764 56789999874222 2367777775
Q ss_pred cCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 393 VKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 393 ~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
+||.+++|..+ ..++++||+++. .+++++++++++|++++++.
T Consensus 305 ~gi~v~~~~~~--~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 305 RGAVIAGGQGP--LKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp TTEECEECCGG--GTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCc--cCCCEEEEEccccCCHHHHHHHHHHHHHHHHHh
Confidence 59999999733 246799999986 47999999999999988765
No 111
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.98 E-value=3.3e-31 Score=270.67 Aligned_cols=349 Identities=11% Similarity=0.078 Sum_probs=226.6
Q ss_pred CCCcccccchhh--hh--cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 45 PNGVIQMGLAEN--LL--CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 45 ~~~~i~l~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
...++|++.+.+ ++ +++.+.+++.+..... . .....|.+..+..+|+++|++++. + -.++
T Consensus 40 g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~-----~----~~~~~~~~~~~~~~l~~~la~~~~---~----~~~~ 103 (426)
T 1sff_A 40 GREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKL-----S----HTCFQVLAYEPYLELCEIMNQKVP---G----DFAK 103 (426)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTC-----S----CCCTTTEECHHHHHHHHHHHHHSS---C----SSCE
T ss_pred CCEEEEcccChhhcccCCCCHHHHHHHHHHHHhC-----C----CccccccCCHHHHHHHHHHHHhCC---c----cccc
Confidence 456789988875 33 3444555554321110 0 001135556678999999999974 1 1358
Q ss_pred cEEEeCChhHHHHHHHH---HhcCCCCeEEEeCCCCcChHH-HHhhhcCcE-------------EEEeecCC---CCCcc
Q 011570 121 RIVMSGGATGAHETVAF---CLADPGDAFLVPTPYYPGFDR-DLRWRTGVQ-------------LVPVVCDS---SNDFK 180 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~---~l~~~gd~Vlv~~P~y~~~~~-~~~~~~G~~-------------~~~v~~~~---~~~~~ 180 (483)
+|++|+|+++++..++. ++.++| .|++++|+|+.+.. .+... |.+ ++.++++. ..++.
T Consensus 104 ~v~~~~g~~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~-g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~ 181 (426)
T 1sff_A 104 KTLLVTTGSEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALT-GKVNPYSAGMGLMPGHVYRALYPCPLHGISED 181 (426)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHS-SCCTTTTTTSCCCCSSEEEECCCBGGGTBCHH
T ss_pred EEEEeCchHHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhc-CCccccccccCCCCCCcEEeCCCccccccchH
Confidence 99999999999999988 677877 89999999987553 44432 543 66677643 12456
Q ss_pred cCHHHHHHHHHHHHhcCCceeEEEEe-CCCCCCc-CCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHh
Q 011570 181 VTMEALEAAYEKAQESNIRIKGVLIT-NPSNPLG-TFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEI 258 (483)
Q Consensus 181 ~d~~~l~~~i~~~~~~~~~~~~i~l~-~P~NPtG-~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l 258 (483)
+|++.|++++++.. .+.++++|+++ +|+| || .+++.+++++|+++|++||++||+||+|.++.+.+ .. .++. .
T Consensus 182 ~d~~~l~~~l~~~~-~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g-~~-~~~~-~ 256 (426)
T 1sff_A 182 DAIASIHRIFKNDA-APEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTG-TL-FAME-Q 256 (426)
T ss_dssp HHHHHHHHHHHHTC-CGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS-SS-SGGG-G
T ss_pred HHHHHHHHHHHhcc-CCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCccc-ch-hhhh-h
Confidence 79999999886410 01256766663 5578 99 78899999999999999999999999999754443 21 2211 1
Q ss_pred hhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh--hhcCCCChHHHHHHHHhcCChhHHHHHHHHHH
Q 011570 259 IDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM--SSFGLVSSQTQHLIATMLSDDQFVEKFIAESA 336 (483)
Q Consensus 259 ~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 336 (483)
. +..+.+.||||.+|. |+|+||++++ +.+.+.+... ...+..++++|.++.+++.... + ....
T Consensus 257 ~--------~~~~di~s~sK~~~~-GlriG~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~---~--~~~~ 321 (426)
T 1sff_A 257 M--------GVAPDLTTFAKSIAG-GFPLAGVTGR-AEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFE---Q--ENLL 321 (426)
T ss_dssp T--------TSCCSEEEECGGGGT-SSCCEEEEEE-HHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHH---H--TTHH
T ss_pred c--------CCCCCEEEEcccccC-CCceEEEEEc-HHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHH---h--cCHH
Confidence 1 111223499999995 9999999995 4555443321 1223467888888776654211 0 1122
Q ss_pred HHHHHHHHHHHHhhhc----CC-ceeecCCceEEEeeecCchhhc--cChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCC
Q 011570 337 KRIAERHKAFTWGLSQ----VG-IGCLKSNAGLFLWMDLHHLLKE--QTYEAEMALWRVIINEVKLNVSPGSSFHCPNPG 409 (483)
Q Consensus 337 ~~l~~~~~~l~~~L~~----~g-i~~~~~~~g~f~~~~l~~~~~~--~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~ 409 (483)
++++++++++.+.|.+ .. +....+. |+|+|++++..... .......+++..|++ +||.+.||..| ++
T Consensus 322 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~~----~~ 395 (426)
T 1sff_A 322 QKANDLGQKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARARD-KGLILLSCGPY----YN 395 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEEEEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHHH-TTEECEEESTT----SC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHHH-CCcEEecCCCC----CC
Confidence 3334444444444443 22 3334455 57999998532100 001223467777775 59999998764 46
Q ss_pred EEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 410 WFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 410 ~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
++||+++. .+++++++++++|++++++.
T Consensus 396 ~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 396 VLRILVPLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 89999973 69999999999999998765
No 112
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.98 E-value=2.2e-30 Score=257.65 Aligned_cols=334 Identities=13% Similarity=0.139 Sum_probs=224.5
Q ss_pred CCcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEe
Q 011570 46 NGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMS 125 (483)
Q Consensus 46 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it 125 (483)
.++|+|+.+.+..+++.+.+++.+... .....|+. .++++++++++.+.+| .+++|++|
T Consensus 7 ~~~id~~~~~~~~~~~~v~~a~~~~~~------------~~~~~~~~----~~~~~~l~~~la~~~g-----~~~~v~~~ 65 (356)
T 1v72_A 7 PPALGFSSDNIAGASPEVAQALVKHSS------------GQAGPYGT----DELTAQVKRKFCEIFE-----RDVEVFLV 65 (356)
T ss_dssp CCCCBCSCGGGCCCCHHHHHHHHHTTS------------SCCCSTTC----SHHHHHHHHHHHHHHT-----SCCEEEEE
T ss_pred CceEeeccCCccCCCHHHHHHHHhhcc------------Cccccccc----chHHHHHHHHHHHHhC-----CCCcEEEe
Confidence 357889887554455666666655210 01123443 3344444444444443 24569999
Q ss_pred CChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH--Hhhhc-CcEEEEeecCCCCCcccCHHHHHH-HHHHHH-hcCCce
Q 011570 126 GGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD--LRWRT-GVQLVPVVCDSSNDFKVTMEALEA-AYEKAQ-ESNIRI 200 (483)
Q Consensus 126 ~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~--~~~~~-G~~~~~v~~~~~~~~~~d~~~l~~-~i~~~~-~~~~~~ 200 (483)
+|+++++..++.+++++||.|+++.|+|..+... +.... |.+++.+|.+ ++.+|+++|++ ++++.. ..+.++
T Consensus 66 ~~gt~a~~~al~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~ 142 (356)
T 1v72_A 66 PTGTAANALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQP 142 (356)
T ss_dssp SCHHHHHHHHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEE
T ss_pred CCccHHHHHHHHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCc
Confidence 9999999999999999999999999998766554 55433 8999998874 36799999998 775310 112368
Q ss_pred eEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCcc--CCCCCcchHHHhhhhccccCCCeEEEEecCcc
Q 011570 201 KGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVF--TKESSFVSIAEIIDQDIACNRNLIHIVYSLSK 278 (483)
Q Consensus 201 ~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~--~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK 278 (483)
++|++++||| ||.+++.+++++|+++|++||++||+||+|..+.. .+ .. .....+.. ..+ +++.|+||
T Consensus 143 ~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~-~~-~~~~~~~~-----~~d--~~~~s~sK 212 (356)
T 1v72_A 143 ACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLG-CS-PAEMTWKA-----GVD--ALSFGATK 212 (356)
T ss_dssp EEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT-CC-TTTTTGGG-----TCC--EEEECCGG
T ss_pred eEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCC-CC-HHHhhhhh-----cCC--EEEEeccc
Confidence 9999999987 99999999999999999999999999999975311 11 11 11111111 123 33459999
Q ss_pred ccCCCCceEEEEEecChHHHHHHHHhhhc-CCC---ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-
Q 011570 279 DMGFPGFRVGIIYSYNDQVVSCARKMSSF-GLV---SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV- 353 (483)
Q Consensus 279 ~~g~~GlRiG~li~~~~~l~~~~~~~~~~-~~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~- 353 (483)
. |. .+..||+++ ++.+.+.+...... +.. +..++..+...+.+..+ .+..+++.++++++.+.|+++
T Consensus 213 ~-g~-~~G~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~l~~~L~~~~ 284 (356)
T 1v72_A 213 N-GV-LAAEAIVLF-NTSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLW-----LRNARKANAAAQRLAQGLEGLG 284 (356)
T ss_dssp G-TC-SSCEEEEES-SGGGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTSTTHH-----HHHHHHHHHHHHHHHHHHTTCT
T ss_pred C-CC-cCccEEEEE-CHHHHhhHHHHhhccCchhhhHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHhhCC
Confidence 8 43 233458887 45555544333222 211 22333334455655332 233455677888999999886
Q ss_pred CceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHH
Q 011570 354 GIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITS 432 (483)
Q Consensus 354 gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~ 432 (483)
|+++..+.+++|+|++++. ++++.|. ++||.++||. |+ ++++|++++. .+++++++++++|++
T Consensus 285 g~~~~~~~~~~~~~~~~~~-----------~~~~~l~-~~gi~v~~g~-~~---~~~iRi~~~~~~~~~~i~~~~~~l~~ 348 (356)
T 1v72_A 285 GVEVLGGTEANILFCRLDS-----------AMIDALL-KAGFGFYHDR-WG---PNVVRFVTSFATTAEDVDHLLNQVRL 348 (356)
T ss_dssp TEEEESCCCSSEEEEEECH-----------HHHHHHH-HTTCBCBCSS-SS---TTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CcEEccCCCccEEEEEcCH-----------HHHHHHH-hcCeEEeccc-cC---CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 8888777778899998862 5667775 5699999987 54 6799999865 589999999999998
Q ss_pred HHHHh
Q 011570 433 FMLKN 437 (483)
Q Consensus 433 ~l~~~ 437 (483)
++++.
T Consensus 349 ~l~~~ 353 (356)
T 1v72_A 349 AADRT 353 (356)
T ss_dssp TC---
T ss_pred HHHhh
Confidence 87654
No 113
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.97 E-value=4.5e-31 Score=267.84 Aligned_cols=340 Identities=15% Similarity=0.126 Sum_probs=230.0
Q ss_pred CCcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCC---CcHH--HHHHHH-HHHHhhhCCCCCcCC
Q 011570 46 NGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYH---GLPE--FRNAVA-KFMGKVRGNRITFDP 119 (483)
Q Consensus 46 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---g~~~--Lr~~ia-~~~~~~~g~~~~~~~ 119 (483)
.++|+++.++|++ ++.+.+++.+.... .....|+... |.+. +++.++ +++.+.+| .++
T Consensus 23 ~~~i~~~~~~~~~-~~~v~~a~~~~~~~-----------~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g----~~~ 86 (407)
T 2dkj_A 23 REGLELIASENFV-SKQVREAVGSVLTN-----------KYAEGYPGARYYGGCEVIDRVESLAIERAKALFG----AAW 86 (407)
T ss_dssp HTSEECCTTCCCC-CHHHHHHHTSGGGG-----------CCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT----CSE
T ss_pred hcceeeccCCCCC-CHHHHHHHHhhhhc-----------CcccCCCcccccCCchHHHHHHHHHHHHHHHHhC----CCc
Confidence 3568999999988 44455555431100 0123454322 4443 444333 34444444 455
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChH---HHHhhhcCc--EEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFD---RDLRWRTGV--QLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~---~~~~~~~G~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
++|++++|+ +++..++.+++++||+|+++.|+|+.+. ..+... |. ..+++++++ .++.+|++.|++++++.
T Consensus 87 ~~i~~~sGt-~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~-~~~~~d~~~l~~~l~~~- 162 (407)
T 2dkj_A 87 ANVQPHSGS-QANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFS-GKLYKVVSYGVRP-DTELIDLEEVRRLALEH- 162 (407)
T ss_dssp EECCCSSHH-HHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHH-HHHSEEEEECCCT-TTSSCCHHHHHHHHHHH-
T ss_pred ceEEecchH-HHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhc-CceEEEEecCCCc-ccCccCHHHHHHHHhhc-
Confidence 667777876 4999999999999999999999998883 334443 65 444444332 35789999999999742
Q ss_pred hcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc-CccCCCCCcchHHHhhhhccccCCCeEEEE
Q 011570 195 ESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA-TVFTKESSFVSIAEIIDQDIACNRNLIHIV 273 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~-~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~ 273 (483)
++++|++++|+|| .+.+ +++|.++|+++|+++|+||+|.. +.+.+ .. .+. + . ..++++
T Consensus 163 ----~~~~v~~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~-~~-~~~--~-~-------~~di~~ 221 (407)
T 2dkj_A 163 ----RPKVIVAGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAG-LH-PNP--L-P-------YAHVVT 221 (407)
T ss_dssp ----CCSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTT-CS-CCC--T-T-------TCSEEE
T ss_pred ----CCeEEEEeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccC-cc-CCc--c-c-------cccEEE
Confidence 6789999999998 5666 88899999999999999999986 33333 21 111 1 1 246789
Q ss_pred ecCccccCCCCceEEEEEecChHHHHHHHHhhhcCC---CChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhh
Q 011570 274 YSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGL---VSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGL 350 (483)
Q Consensus 274 ~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L 350 (483)
+|+||.+ +|+|+||++++++.+.+.+......+. .+.....++.+++... ...++++.+++++++++++.+.|
T Consensus 222 ~s~sK~l--~g~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L 297 (407)
T 2dkj_A 222 STTHKTL--RGPRGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEA--LQPEFKEYSRLVVENAKRLAEEL 297 (407)
T ss_dssp EESSGGG--CCCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--HSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeccccC--CCCCceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHH
Confidence 9999954 688999999964666666655443322 2322232444444321 12346777888889999999999
Q ss_pred hcCCceeec-CCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCC----CCCCCCEEEEEecc-----CCH
Q 011570 351 SQVGIGCLK-SNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSF----HCPNPGWFRVCFAN-----MDD 420 (483)
Q Consensus 351 ~~~gi~~~~-~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f----~~~~~~~iRis~~~-----~~~ 420 (483)
++.|+++.. +.+++|+|++++... . ...++.+.| .++||.+.+|..| ....++++|++++. .++
T Consensus 298 ~~~g~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~ 371 (407)
T 2dkj_A 298 ARRGYRIVTGGTDNHLFLVDLRPKG--L---TGKEAEERL-DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTP 371 (407)
T ss_dssp HHTTCEEGGGSCSSSEEEEECGGGT--C---CHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCG
T ss_pred HhCCceeecCCCCceEEEEECcccC--C---CHHHHHHHH-HHcCceecCCcCccccccccCCCceeeecccccccCCCH
Confidence 988988775 356789999987411 0 123566666 4679999999764 22235789999963 589
Q ss_pred HHHHHHHHHHHHHHHH
Q 011570 421 RTMEIALSRITSFMLK 436 (483)
Q Consensus 421 e~l~~~l~~L~~~l~~ 436 (483)
+++++++++|++++++
T Consensus 372 ~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 372 EEMPLVAELIDRALLE 387 (407)
T ss_dssp GGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999999887
No 114
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.97 E-value=5.7e-30 Score=260.32 Aligned_cols=297 Identities=11% Similarity=0.130 Sum_probs=220.4
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEE-EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC--hHHHHhhhcCcEEEEee
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIV-MSGGATGAHETVAFCLADPGDAFLVPTPYYPG--FDRDLRWRTGVQLVPVV 172 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~-it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~--~~~~~~~~~G~~~~~v~ 172 (483)
..++++.++++++ .++++++ +++|+++++..++.+++++||+|+++.|+|.+ +...++.. |.+++.++
T Consensus 46 ~~~l~~~la~~~g--------~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~-g~~~~~v~ 116 (416)
T 3isl_A 46 MNETMEMLRELFQ--------TKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERY-GANVHMLE 116 (416)
T ss_dssp HHHHHHHHHHHTT--------CCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred HHHHHHHHHHHhC--------CCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHhc-CCeeEEEe
Confidence 3455555555544 4566665 88899999999999999999999999999987 66666665 99999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
++++ +.+|+++|++++++. ++++|++++|+||||.+++ +++|.++|+++|++||+|++|+.. . ..
T Consensus 117 ~~~~--~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~---~-~~- 181 (416)
T 3isl_A 117 CEWG--TVFDPEDIIREIKKV-----KPKIVAMVHGETSTGRIHP---LKAIGEACRTEDALFIVDAVATIG---G-CE- 181 (416)
T ss_dssp CCTT--CCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CHHHHHHHHHTTCEEEEECTTTTT---T-SC-
T ss_pred cCCC--CCCCHHHHHHHHhhC-----CCcEEEEEccCCCCceecC---HHHHHHHHHHcCCEEEEECCcccc---C-CC-
Confidence 8753 478999999999742 7899999999999999999 788899999999999999998732 2 11
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh---------------------------
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--------------------------- 305 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--------------------------- 305 (483)
.+.. ..+..+++.|+||.++ ++.++|++++ ++.+.+.+....
T Consensus 182 ~~~~---------~~~~d~~~~s~~K~l~-g~~g~g~~~~-~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~ 250 (416)
T 3isl_A 182 VKVD---------EWKIDAAIGGTQKCLS-VPSGMAPITY-NERVADVIAARKKVERGIATQADRAALSGNRPITSNYFD 250 (416)
T ss_dssp CCTT---------TTTCSEEECCSSSTTC-CCSSEEEEEE-CHHHHHHHHTC------------------CCCCSCSTTC
T ss_pred cchh---------hcCCCEEEecCccccC-CCCCeEEEEE-CHHHHHHhhccccccccccccccchhccCCCCCCccccc
Confidence 1111 1245688899999753 4445899999 455555443211
Q ss_pred -------------hcCCCChHHHHHHHHhcCChhHHHHH-HHHHHHHHHHHHHHHHHhhhcCCceeecCCc---eEEEee
Q 011570 306 -------------SFGLVSSQTQHLIATMLSDDQFVEKF-IAESAKRIAERHKAFTWGLSQVGIGCLKSNA---GLFLWM 368 (483)
Q Consensus 306 -------------~~~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~---g~f~~~ 368 (483)
..+..+...+.++.+++.. ...+ +++.+++++++++++.+.|.+.|+++..+.+ +.++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 327 (416)
T 3isl_A 251 LSQLEDYWSERRLNHHTEATTMLYALREGVRL---VLEEGLETRFERHRHHEAALAAGIKAMGLRLFGDDSCKMPVVTCV 327 (416)
T ss_dssp HHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCTTEEEE
T ss_pred hHHHHhhhcccCCCCCCCCHHHHHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeccCccccCCcEEEE
Confidence 1133455666665555532 2333 6777888899999999999988988876654 568888
Q ss_pred ecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHH-HHHHHHHHHHHHHHhh
Q 011570 369 DLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRT-MEIALSRITSFMLKNV 438 (483)
Q Consensus 369 ~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~-l~~~l~~L~~~l~~~~ 438 (483)
.++...+ ..++.+.|++++||.+++|... ..++++||++.. .++++ +++++++|++++++..
T Consensus 328 ~~~~~~~------~~~l~~~L~~~~gi~v~~g~~~--~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~ 391 (416)
T 3isl_A 328 EIPGGID------GESVRDMLLAQFGIEIASSFGP--LAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHN 391 (416)
T ss_dssp ECCTTCC------HHHHHHHHHHHHCEECBCCCST--TTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred eCCCCCC------HHHHHHHHHHhCCEEEecCCCC--CCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcC
Confidence 8874322 2377888887779999998732 346799999933 45555 9999999999998764
No 115
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.97 E-value=2.1e-30 Score=264.42 Aligned_cols=343 Identities=14% Similarity=0.153 Sum_probs=233.6
Q ss_pred CCCcccccchhhhhcHHHHHHHHhcCCC--CccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcE
Q 011570 45 PNGVIQMGLAENLLCHELVEDWLMNNPK--ASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRI 122 (483)
Q Consensus 45 ~~~~i~l~~~~n~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i 122 (483)
..+++.|+.+.+..+++.+.+++.+... ...-.+.. . .....|.......++++.++++++ +++++|
T Consensus 20 ~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~l~~~la~~~~--------~~~~~v 88 (423)
T 3lvm_A 20 MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPAS--R-SHRFGWQAEEAVDIARNQIADLVG--------ADPREI 88 (423)
T ss_dssp CCSSEECBTTTCCCCCHHHHHHHTTSSSTTSCCSCTTC--T-TSHHHHHHHHHHHHHHHHHHHHHT--------CCGGGE
T ss_pred cCCCEeecCCCcCCCCHHHHHHHHHHHhhcccccCCCc--c-ccchhHHHHHHHHHHHHHHHHHcC--------CCCCeE
Confidence 3556777766655555666666654321 00000000 0 000001111223566777777665 577899
Q ss_pred EEeCChhHHHHHHHHHhcC----CCCeEEEeCCCCcChHHHH---hhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 123 VMSGGATGAHETVAFCLAD----PGDAFLVPTPYYPGFDRDL---RWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~----~gd~Vlv~~P~y~~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
++|+|+++++..++.++.+ +||.|+++.|+|+.+...+ .. .|.+++.++.++ ++.+|++.|++++.+
T Consensus 89 ~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~-~g~~~~~v~~~~--~~~~d~~~l~~~i~~--- 162 (423)
T 3lvm_A 89 VFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLER-EGFEVTYLAPQR--NGIIDLKELEAAMRD--- 162 (423)
T ss_dssp EEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHH-TTCEEEEECCCT--TSCCCHHHHHHHCCT---
T ss_pred EEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHH-cCCEEEEeccCC--CCccCHHHHHHhcCC---
Confidence 9999999999999998874 8999999999999887765 43 399999999875 567899999998863
Q ss_pred cCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEec
Q 011570 196 SNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYS 275 (483)
Q Consensus 196 ~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S 275 (483)
++++|++++|+||||.+++ +++|+++|+++|++||+||+|+...+ + .+.. ..+.++++.|
T Consensus 163 ---~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~-~~~~---------~~~~di~~~s 222 (423)
T 3lvm_A 163 ---DTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKL----P-IDLS---------QLKVDLMSFS 222 (423)
T ss_dssp ---TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTS----C-CCTT---------TSCCSEEEEE
T ss_pred ---CcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCC----C-cChh---------hcCCCEEEec
Confidence 7899999999999999999 77889999999999999999874211 1 1111 2245688899
Q ss_pred CccccCCCCceEEEEEecChHHHHHHHHh---------hhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHH
Q 011570 276 LSKDMGFPGFRVGIIYSYNDQVVSCARKM---------SSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAF 346 (483)
Q Consensus 276 ~SK~~g~~GlRiG~li~~~~~l~~~~~~~---------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l 346 (483)
+||.+|.+| +||++++++.+ ..+... ...+..+...+.++..++. .+..++++..++++++++++
T Consensus 223 ~sK~~g~~g--~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~---~~~~~~~~~~~~~~~~~~~l 296 (423)
T 3lvm_A 223 GHKIYGPKG--IGALYVRRKPR-VRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYR---IAKEEMATEMERLRGLRNRL 296 (423)
T ss_dssp STTTTSCSS--CEEEEECBTTB-CCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhcCCCC--eEEEEEecccc-CCCCccccCCcccccccCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 999988767 89999954322 222111 1123345566655555543 22344677888899999999
Q ss_pred HHhhhcC-CceeecCCc---eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCC---------------
Q 011570 347 TWGLSQV-GIGCLKSNA---GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPN--------------- 407 (483)
Q Consensus 347 ~~~L~~~-gi~~~~~~~---g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~--------------- 407 (483)
.+.|.++ |+++..+.+ +.++++.++.. + ..++...|. + |.+.+|..|....
T Consensus 297 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~l~~~l~-~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~ 366 (423)
T 3lvm_A 297 WNGIKDIEEVYLNGDLEHGAPNILNVSFNYV-E------GESLIMALK-D--LAVSSGSACTSASLEPSYVLRALGLNDE 366 (423)
T ss_dssp HHHHTTSTTEEEESCSTTBCTTEEEEEETTS-C------HHHHHHHTT-T--EECBCCCC-----CCCCHHHHHHTCCHH
T ss_pred HHHHhcCCCEEEeCCccccCCCeEEEEeCCC-C------HHHHHHHHh-h--heeccCccccCCCccccHHHHHhCCCcc
Confidence 9999988 888876553 23555555321 1 225555554 3 9999998765421
Q ss_pred --CCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhhc
Q 011570 408 --PGWFRVCFAN-MDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 408 --~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
++++||+++. .+++++++++++|++++++.++.
T Consensus 367 ~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~~ 402 (423)
T 3lvm_A 367 LAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDL 402 (423)
T ss_dssp HHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHHHHhhcc
Confidence 3789999985 58899999999999999887654
No 116
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.97 E-value=1.6e-30 Score=258.12 Aligned_cols=293 Identities=13% Similarity=0.031 Sum_probs=216.6
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcCh--HHHHhhhcCcEEEEee
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGF--DRDLRWRTGVQLVPVV 172 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~--~~~~~~~~G~~~~~v~ 172 (483)
+..++|+.++++++ .+.++++|++|+|+++++..++.++++ |+|+++.|+|+.+ ...++.. |.+++.++
T Consensus 34 ~~~~l~~~la~~~g------~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~~~~~~~~~~~~~~~-g~~~~~v~ 104 (353)
T 2yrr_A 34 VNRAIQERLAALFD------PGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVNGAFSQRVAEMAALH-GLDPEVLD 104 (353)
T ss_dssp HHHHHHHHHHHHHC------CCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEECSHHHHHHHHHHHHT-TCCEEEEE
T ss_pred HHHHHHHHHHHHhC------CCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcCCCchHHHHHHHHHc-CCceEEEe
Confidence 46788888888876 223478899999999999999998876 8999999999875 3444554 99999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
+++ ++.+|++.|++++++. ++++|++++|+||||.+++ +++|.++|+++|++||+||+|+ +.. ..
T Consensus 105 ~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~D~a~~---~~~-~~- 169 (353)
T 2yrr_A 105 FPP--GEPVDPEAVARALKRR-----RYRMVALVHGETSTGVLNP---AEAIGALAKEAGALFFLDAVTT---LGM-LP- 169 (353)
T ss_dssp CCT--TSCCCHHHHHHHHHHS-----CCSEEEEESEETTTTEECC---HHHHHHHHHHHTCEEEEECTTT---TTT-SC-
T ss_pred CCC--CCCCCHHHHHHHHHhC-----CCCEEEEEccCCCcceecC---HHHHHHHHHHcCCeEEEEcCcc---ccc-cc-
Confidence 875 4579999999998741 6789999999999999999 7788899999999999999996 332 22
Q ss_pred chHHHhhhhccccCCCeEEEEecCcccc-CCCCceEEEEEecChHHHHHHH-------------H----hhhcCCCChHH
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDM-GFPGFRVGIIYSYNDQVVSCAR-------------K----MSSFGLVSSQT 314 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~li~~~~~l~~~~~-------------~----~~~~~~~s~~~ 314 (483)
.++..+ +..+++.|++|.+ |.+| +||++++ +.+.+.+. . ....++.+...
T Consensus 170 ~~~~~~---------~~d~~~~s~~K~~~~~~g--~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (353)
T 2yrr_A 170 FSMRAM---------GVDYAFTGSQKCLSAPPG--LAPIAAS-LEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLL 237 (353)
T ss_dssp CCHHHH---------TCSEEECCTTSTTCCCSS--CEEEEEC-HHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHH
T ss_pred cccccc---------CceEEEecCcccccCCCc--eEEEEEC-HHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHH
Confidence 233332 2346788999965 4466 6999995 44443332 0 11124456666
Q ss_pred HHHHHHhcCChhHHHHH-HHHHHHHHHHHHHHHHHhhhcCCceeecCC--ceEEEeeecCchhhccChHHHHHHHHHHHH
Q 011570 315 QHLIATMLSDDQFVEKF-IAESAKRIAERHKAFTWGLSQVGIGCLKSN--AGLFLWMDLHHLLKEQTYEAEMALWRVIIN 391 (483)
Q Consensus 315 q~~~~~~l~~~~~~~~~-~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~--~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~ 391 (483)
+.++.+++.. +.+. +++.+++++++++++.+.|++.|+++..+. +++++|++++...+ ..++.+.|.+
T Consensus 238 ~~a~~~al~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~ 308 (353)
T 2yrr_A 238 HYALLEALDL---VLEEGVAARERRAREVYAWVLEELKARGFRPYPKASPLPTVLVVRPPEGVD------ADRLVRALYA 308 (353)
T ss_dssp HHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBCTTEEEEECCTTCC------HHHHHHHHHH
T ss_pred HHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHCCCccccCccCCCeEEEEECCCCCC------HHHHHHHHHH
Confidence 6666555532 2222 567778888999999999988888877654 56677888864222 2367777775
Q ss_pred hcCeEeeCCCCCCCCCCCEEEEEe-ccCCHHHHH-HHHHHHHHHHH
Q 011570 392 EVKLNVSPGSSFHCPNPGWFRVCF-ANMDDRTME-IALSRITSFML 435 (483)
Q Consensus 392 ~~gV~v~pg~~f~~~~~~~iRis~-~~~~~e~l~-~~l~~L~~~l~ 435 (483)
+ ||.+++|..|. .++++|+++ +..++++++ +++++|+++++
T Consensus 309 ~-gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 309 E-GVAVAGGIGPT--RGQVLRLGLMGEGARREAYQAFLKALDRALA 351 (353)
T ss_dssp T-TEECEECCGGG--TTTCEEEECSGGGSCHHHHHHHHHHHHHHHH
T ss_pred C-CEEEeCCcccc--CCCeEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 5 99999998664 357899999 435888888 99999998875
No 117
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.1e-30 Score=264.94 Aligned_cols=293 Identities=14% Similarity=0.111 Sum_probs=215.3
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh---cCCCCeEEEeCCCCcChHHHHhhh---cCcEE
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL---ADPGDAFLVPTPYYPGFDRDLRWR---TGVQL 168 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l---~~~gd~Vlv~~P~y~~~~~~~~~~---~G~~~ 168 (483)
+..++++.++++++ +++++|++|+|+++++..++.++ +++||+|+++.|+|+.+...+... .|.++
T Consensus 70 ~~~~l~~~la~~~g--------~~~~~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v 141 (406)
T 3cai_A 70 VLDAAREAVADLVN--------ADPGGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKV 141 (406)
T ss_dssp HHHHHHHHHHHHHT--------CCGGGEEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEE
T ss_pred HHHHHHHHHHHHhC--------CCCCeEEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeE
Confidence 46788888888876 46789999999999999999887 789999999999999876555431 39999
Q ss_pred EEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCC
Q 011570 169 VPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTK 248 (483)
Q Consensus 169 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~ 248 (483)
+.++++++ ++.+|++.|++++.+ ++++|++++|+||||.+++ +++|.++|+++|++||+||+|.. ..
T Consensus 142 ~~v~~~~~-~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~---g~ 208 (406)
T 3cai_A 142 KWAEVDIE-TGELPTWQWESLISK------STRLVAVNSASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAA---PY 208 (406)
T ss_dssp EEECCCTT-TCCCCGGGHHHHCCT------TEEEEEEESBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTT---TT
T ss_pred EEEecCcc-cCCcCHHHHHHHhCC------CceEEEEeCCcCCccccCC---HHHHHHHHHHcCCEEEEEccccc---CC
Confidence 99998732 457899999998853 7899999999999999999 78889999999999999999973 22
Q ss_pred CCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEE-EEEecChHHHHHHHHhhh-----------cCCCChHHHH
Q 011570 249 ESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVG-IIYSYNDQVVSCARKMSS-----------FGLVSSQTQH 316 (483)
Q Consensus 249 ~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG-~li~~~~~l~~~~~~~~~-----------~~~~s~~~q~ 316 (483)
.. .++..+ +.++++.|+||.+| ++ +| |+++ ++.+.+.+..... .+..+...+.
T Consensus 209 -~~-~~~~~~---------~~d~~~~s~~K~~g-~~--~G~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~ 273 (406)
T 3cai_A 209 -RL-LDIRET---------DADVVTVNAHAWGG-PP--IGAMVFR-DPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLA 273 (406)
T ss_dssp -CC-CCHHHH---------CCSEEEEEGGGGTS-CS--CEEEEES-CHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHH
T ss_pred -CC-CCchhc---------CCCEEEeehhhhcC-CC--cCeEEEE-ehHHHhhcCCcccCCCCCccccccCCCccHHHHH
Confidence 11 233222 45678899999887 65 89 9998 4555544332211 2334555554
Q ss_pred HHHHhcCChh------------HHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCC---ceEEEeeecCchhhccChH
Q 011570 317 LIATMLSDDQ------------FVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSN---AGLFLWMDLHHLLKEQTYE 380 (483)
Q Consensus 317 ~~~~~l~~~~------------~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~---~g~f~~~~l~~~~~~~~~~ 380 (483)
++..++.... .+++++++.+++++++++++.+.|+++ |+++..+. ++ ++++.++. .+
T Consensus 274 a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~-~~~~~~~~-~~----- 346 (406)
T 3cai_A 274 GVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIP-VVSFAVHK-VP----- 346 (406)
T ss_dssp HHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCS-EEEEEETT-BC-----
T ss_pred HHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCC-EEEEEECC-cC-----
Confidence 4443432110 012246777888889999999999987 78777653 44 78888763 11
Q ss_pred HHHHHHHHHHHhcCeEeeCCC------CCCCC-CCCEEEEEecc-CCHHHHHHHHHHHHH
Q 011570 381 AEMALWRVIINEVKLNVSPGS------SFHCP-NPGWFRVCFAN-MDDRTMEIALSRITS 432 (483)
Q Consensus 381 ~~~~~~~~Ll~~~gV~v~pg~------~f~~~-~~~~iRis~~~-~~~e~l~~~l~~L~~ 432 (483)
..++.+.|. ++||.+++|. .|+.. ..+++||+++. .+++++++++++|++
T Consensus 347 -~~~~~~~L~-~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 347 -ADRVVQRLA-DNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp -HHHHHHHHH-HTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred -HHHHHHHHH-HCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 235677665 5699999987 33322 34789999986 489999999999875
No 118
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.97 E-value=1.1e-29 Score=255.18 Aligned_cols=299 Identities=11% Similarity=0.045 Sum_probs=198.8
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH---HHhhhcCcEEEEeecC
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR---DLRWRTGVQLVPVVCD 174 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---~~~~~~G~~~~~v~~~ 174 (483)
.+.+.+++++.+.+| .+ +++++++|+|+++++..++.++ +||+|+++.|+|+.+.. .++.. |++++.+
T Consensus 58 ~~~~~~~~~~a~~~g--~~-~~~~~~~~~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~-g~~~~~v--- 128 (374)
T 2aeu_A 58 YFAEKVNEYGLKHLG--GD-ENDKCVGFNRTSSAILATILAL--KPKKVIHYLPELPGHPSIERSCKIV-NAKYFES--- 128 (374)
T ss_dssp HHHHHHHHHHHHHHT--CC-TTEEEEEESSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHT-TCEEEEE---
T ss_pred HHHHHHHHHHHHHhC--CC-CcceEEEEcChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHc-CcEEEEe---
Confidence 445566666655555 11 3578999999999999999988 99999999998876443 45554 9998887
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCceeE-EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcc
Q 011570 175 SSNDFKVTMEALEAAYEKAQESNIRIKG-VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFV 253 (483)
Q Consensus 175 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~-i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~ 253 (483)
.|+++++++ . +++++ |++++||||||. +..++++|.++|+++|++||+||+|+.+....... .
T Consensus 129 ------~d~~~l~~~-~------~~~~~~v~~~~p~nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~-~ 192 (374)
T 2aeu_A 129 ------DKVGEILNK-I------DKDTLVIITGSTMDLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQ-P 192 (374)
T ss_dssp ------SCHHHHHTT-C------CTTEEEEEECBCTTSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTC-C
T ss_pred ------CCHHHHHhc-C------CCccEEEEEccCCCCCCC--CcccHHHHHHHHHHcCCEEEEECCccccccccccc-C
Confidence 267777765 2 37899 999999999997 78889999999999999999999998652101011 1
Q ss_pred hHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh-c-CCCChHHHHHHHHhcCChh--HHH
Q 011570 254 SIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS-F-GLVSSQTQHLIATMLSDDQ--FVE 329 (483)
Q Consensus 254 s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~-~-~~~s~~~q~~~~~~l~~~~--~~~ 329 (483)
+...+ ..+++++|+||.+ +|+|+||++++ +.+.+.+..... + ..++++.+.++...+.... .++
T Consensus 193 ~~~~~---------~~di~~~S~sK~l--~g~~~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~ 260 (374)
T 2aeu_A 193 PALKL---------GADLVVTSTDKLM--EGPRGGLLAGK-KELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIR 260 (374)
T ss_dssp CHHHH---------TCSEEEEETTSSS--SSCSCEEEEEE-HHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHH
T ss_pred Ccccc---------CCcEEEecCcccc--cCcceEEEEEC-HHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHH
Confidence 12222 3357889999985 67899999994 566665555433 2 2357777777766665321 112
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcC----Cceee-cCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCC
Q 011570 330 KFIAESAKRIAERHKAFTWGLSQV----GIGCL-KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFH 404 (483)
Q Consensus 330 ~~~~~~~~~l~~~~~~l~~~L~~~----gi~~~-~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~ 404 (483)
++.+..+...+++++.+.+.|... |+.+. .+.|.+|.|.+++.... .....+++..+++++||.++||..|.
T Consensus 261 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~ll~~~gV~v~~g~~~~ 337 (374)
T 2aeu_A 261 KAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTIN---IKKLIEIGFNLLKNYGIITITVAGMP 337 (374)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHH---HHHHHHHHHHHHHHHCEECSTTSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeeccccccc---ccchHHHHHHHHHhCCEEEecCCCCC
Confidence 222221111122246666666653 66664 45555555655543211 01223477778888899999998773
Q ss_pred CCCCCEEEEEeccCC--HHHHHHHHHHHHHHHHHh
Q 011570 405 CPNPGWFRVCFANMD--DRTMEIALSRITSFMLKN 437 (483)
Q Consensus 405 ~~~~~~iRis~~~~~--~e~l~~~l~~L~~~l~~~ 437 (483)
..++++||+++..+ +.+++.+++.|++++++.
T Consensus 338 -~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~ 371 (374)
T 2aeu_A 338 -GASKSLRIDLTSRDAERIDDNYIIKAIVESIKMA 371 (374)
T ss_dssp -SSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHH
T ss_pred -CCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 34568999997422 233777777777776654
No 119
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.97 E-value=1.9e-29 Score=258.11 Aligned_cols=358 Identities=11% Similarity=0.041 Sum_probs=213.2
Q ss_pred CCCcccccch--hhhhc--HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 45 PNGVIQMGLA--ENLLC--HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 45 ~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
...++|++.+ .++++ ++.+.+++.+. +.....|....+..++++++++++.+.++ .+++
T Consensus 28 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~la~~~~----~~~~ 90 (430)
T 3i4j_A 28 GRRYLDGSSGALVANIGHGRAEVGERMAAQ-------------AARLPFVHGSQFSSDVLEEYAGRLARFVG----LPTF 90 (430)
T ss_dssp SCEEEETTHHHHTCTTCBCCHHHHHHHHHH-------------HHHCCCCCTTTCEEHHHHHHHHHHHHHTT----CTTC
T ss_pred CCEEEECCCchhccccCCCCHHHHHHHHHH-------------HHhcccccccccCCHHHHHHHHHHHHhCC----CCCC
Confidence 3457888877 44443 44455544331 11122344334567788888888877654 5678
Q ss_pred cEEEeCChhHHHHHHHHHhc--------CCCCeEEEeCCCCcChHHHHhhhcCc--------------EEEEeecCCC-C
Q 011570 121 RIVMSGGATGAHETVAFCLA--------DPGDAFLVPTPYYPGFDRDLRWRTGV--------------QLVPVVCDSS-N 177 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~--------~~gd~Vlv~~P~y~~~~~~~~~~~G~--------------~~~~v~~~~~-~ 177 (483)
+|++|+|+++++..++.+++ .++|.|++.+|+|+++...+....+. .+..++.++. .
T Consensus 91 ~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (430)
T 3i4j_A 91 RFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPAR 170 (430)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTS
T ss_pred EEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccc
Confidence 99999999999999998876 45789999999998877654433121 1222222110 0
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCC-CC-CCcC-CCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcch
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNP-SN-PLGT-FLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVS 254 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P-~N-PtG~-~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s 254 (483)
....|++.|++++++... .+++ +++++| || ++|. +++.+++++|.++|++||+++|+||+|.++.+.+ . +.+
T Consensus 171 ~~~~~~~~le~~l~~~~~--~~~~-~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g-~-~~~ 245 (430)
T 3i4j_A 171 NGAEDAEGLRALLEREGP--ETVA-AFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCG-S-PLA 245 (430)
T ss_dssp CHHHHHTHHHHHHHHHCG--GGEE-EEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS-S-SSG
T ss_pred hhhHHHHHHHHHHHhcCC--CCEE-EEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc-c-hhh
Confidence 012366889998875310 2444 555566 66 8887 6688889999999999999999999998864443 2 222
Q ss_pred HHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh------hhcCCCChHHHHHHHHhcCChhH
Q 011570 255 IAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM------SSFGLVSSQTQHLIATMLSDDQF 327 (483)
Q Consensus 255 ~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~------~~~~~~s~~~q~~~~~~l~~~~~ 327 (483)
...+.. ...++ .||||+++ +| +|+||+++ ++.+.+.+... ...+..++++|.++.++|+....
T Consensus 246 ~~~~~~-----~~~di---~t~sK~l~-~G~~r~G~~~~-~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~ 315 (430)
T 3i4j_A 246 LSRWSG-----VTPDI---AVLGKGLA-AGYAPLAGLLA-APQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVER 315 (430)
T ss_dssp GGGTTT-----CCCSE---EEECGGGT-TTSSCCEEEEE-CHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHH
T ss_pred hhhhcC-----CCCcE---EEEccccc-CCccccEEEEE-CHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHc
Confidence 221101 11222 37899999 69 99999999 67777766542 12345788999888877753211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecCchhhccC---hHHHHHHHHHHHHhcCeEeeCCCCC
Q 011570 328 VEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLHHLLKEQT---YEAEMALWRVIINEVKLNVSPGSSF 403 (483)
Q Consensus 328 ~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~~~~~~~~---~~~~~~~~~~Ll~~~gV~v~pg~~f 403 (483)
+++.++.++..+..++.+.+.+.++ ++...++.| .|+++++........ .....++++.++ ++||.++|+..+
T Consensus 316 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~ 392 (430)
T 3i4j_A 316 -EDLTGAAKERGAQLLAGLQALQARFPQMMQVRGTG-LLLGVVLGDLATGQAFETPGIASRIGAAAL-KRGLITYPGSGA 392 (430)
T ss_dssp -TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEET-TEEEEEEC------------CHHHHHHHHH-HTTEECC-----
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEE-EEEEEEeccccccCCCccHHHHHHHHHHHH-hCCCEEEecccc
Confidence 1223333333333444444444344 455566665 588888753211000 001236777777 569999998433
Q ss_pred C-CCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 404 H-CPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 404 ~-~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
. ....+++||+++. .+++++++++++|++++++.
T Consensus 393 ~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 393 EPNGRGDHLLLGPPLSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp ------CEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 2 2235789999975 59999999999999998754
No 120
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.97 E-value=3.1e-30 Score=258.86 Aligned_cols=320 Identities=13% Similarity=0.096 Sum_probs=222.1
Q ss_pred CCCcccccchhh--hh--cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 45 PNGVIQMGLAEN--LL--CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 45 ~~~~i~l~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
...++|++.+.+ ++ +++.+.+++.+.... . ......|+ ..+..+|+++++++++ + ++
T Consensus 27 g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~------~---~~~~~~y~-~~~~~~l~~~la~~~g--------~-~~ 87 (375)
T 2eh6_A 27 GKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEK------L---LHVSNLYE-NPWQEELAHKLVKHFW--------T-EG 87 (375)
T ss_dssp CCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHH------C---SCCCTTBC-CHHHHHHHHHHHHTSS--------S-CE
T ss_pred CCEEEEcCCcccccccCCCCHHHHHHHHHHHHh------c---cccCcccC-CHHHHHHHHHHHhhcC--------C-CC
Confidence 346789998874 33 334455544331000 0 00123564 3467899999999864 3 48
Q ss_pred cEEEeCChhHHHHHHHHH---hc---CCC-CeEEEeCCCCcChHHHHhhhcCcE-------------EEEeecCCCCCcc
Q 011570 121 RIVMSGGATGAHETVAFC---LA---DPG-DAFLVPTPYYPGFDRDLRWRTGVQ-------------LVPVVCDSSNDFK 180 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~---l~---~~g-d~Vlv~~P~y~~~~~~~~~~~G~~-------------~~~v~~~~~~~~~ 180 (483)
+|++|+|+++++..++.+ +. +|| |+|++++|+|+.+...+... +.. +..++.
T Consensus 88 ~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------- 159 (375)
T 2eh6_A 88 KVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSA-TGQPKFHKGFEPLVPGFSYAKL------- 159 (375)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHH-CBCGGGTTTTCSCCSSEEEECT-------
T ss_pred eEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhh-cCCccccCCCCCCCCCceeCCC-------
Confidence 999999999999999865 45 788 99999999998876655443 322 222221
Q ss_pred cCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhh
Q 011570 181 VTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEII 259 (483)
Q Consensus 181 ~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~ 259 (483)
.|+++|++++++ ++++|++++|+||||.+ .+.+++++|+++|+++|+++|+||+|.++.+.+ .. .++..+.
T Consensus 160 ~d~~~l~~~l~~------~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~-~~~~~~~ 231 (375)
T 2eh6_A 160 NDIDSVYKLLDE------ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTG-EF-YAYQHFN 231 (375)
T ss_dssp TCHHHHHTTCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS-SS-SGGGGGT
T ss_pred chHHHHHHHhcC------CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCC-cc-hhhhhcC
Confidence 488999887753 78999999999999999 568899999999999999999999999743332 21 2222221
Q ss_pred hhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH--hhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHH
Q 011570 260 DQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK--MSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAK 337 (483)
Q Consensus 260 ~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~ 337 (483)
...+++ ||||.++ +|+|+||++++ +.+.+.+.. ....+..+++.+.++.++++.. .+..+
T Consensus 232 ------~~~d~~---s~SK~~~-~g~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~ 293 (375)
T 2eh6_A 232 ------LKPDVI---ALAKGLG-GGVPIGAILAR-EEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEV-------EKLLP 293 (375)
T ss_dssp ------CCCSEE---EECGGGG-TTSCCEEEEEE-HHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHH-------HHHHH
T ss_pred ------CCCCEE---EEccccc-CCCCeEEEEEc-HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH-------HHHHH
Confidence 112333 8899998 79999999995 455444333 1122345777777776665431 14566
Q ss_pred HHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc
Q 011570 338 RIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN 417 (483)
Q Consensus 338 ~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~ 417 (483)
+++++++++.+.|++++....++ .|+|+|++++.. ..++++.|++ +||.+.|+. ++++||+++.
T Consensus 294 ~~~~~~~~l~~~L~~~~~~~~~~-~g~~~~~~~~~~--------~~~~~~~l~~-~gi~~~~~~------~~~iRi~~~~ 357 (375)
T 2eh6_A 294 HVREVGNYFKEKLKELGKGKVKG-RGLMLGLELERE--------CKDYVLKALE-KGLLINCTA------GKVLRFLPPL 357 (375)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEE-ETTEEEEECSSC--------CHHHHHHHHH-TTEECEEET------TTEEEECCCT
T ss_pred HHHHHHHHHHHHHHHHhcCCceE-EEEEEEEEEcCc--------HHHHHHHHHH-CCCEEecCC------CCEEEEECCC
Confidence 77788888999998876544444 457899998741 1267777774 699999862 5789999874
Q ss_pred -CCHHHHHHHHHHHHHH
Q 011570 418 -MDDRTMEIALSRITSF 433 (483)
Q Consensus 418 -~~~e~l~~~l~~L~~~ 433 (483)
.+++++++++++|+++
T Consensus 358 ~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 358 IIQKEHIDRAISVLREI 374 (375)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHh
Confidence 6999999999999875
No 121
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.97 E-value=4.9e-29 Score=250.67 Aligned_cols=296 Identities=14% Similarity=0.122 Sum_probs=217.9
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc---CCCCeEEEe-CCCCcChH-HHHhhhcCcEEEE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA---DPGDAFLVP-TPYYPGFD-RDLRWRTGVQLVP 170 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~---~~gd~Vlv~-~P~y~~~~-~~~~~~~G~~~~~ 170 (483)
..++++.++++++...+ +++++|++|+|+++++..++.++. ++||+|+++ .|+|+.+. ..++.. |.+++.
T Consensus 40 ~~~~~~~l~~~~~~~~~----~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~-g~~~~~ 114 (385)
T 2bkw_A 40 FQRVLKNTRAVFKSAAA----SKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSY-GAQVDV 114 (385)
T ss_dssp HHHHHHHHHHHTTCCGG----GTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHT-TCEEEE
T ss_pred HHHHHHHHHHHhCCCCC----CCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHc-CCceEE
Confidence 56788889988875433 568899999999999999999998 899999888 55666553 455554 999999
Q ss_pred eec-CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc--CcEEEEccccccCccC
Q 011570 171 VVC-DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK--NIHLVCDEIYAATVFT 247 (483)
Q Consensus 171 v~~-~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~--~~~iI~Deay~~~~~~ 247 (483)
+++ ++ ++.+|+++|++++++ .++++|++++|+||||.+++ +++|+++|+++ |++||+||+|.. .
T Consensus 115 v~~~~~--~~~~d~~~l~~~l~~-----~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~~~li~D~a~~~---~ 181 (385)
T 2bkw_A 115 VRPLKI--GESVPLELITEKLSQ-----NSYGAVTVTHVDTSTAVLSD---LKAISQAIKQTSPETFFVVDAVCSI---G 181 (385)
T ss_dssp ECCSST--TSCCCHHHHHHHHHH-----SCCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTSEEEEECTTTT---T
T ss_pred EecCCC--CCCCCHHHHHHHHhc-----CCCCEEEEEccCCCcCeEcC---HHHHHHHHHhhCCCCEEEEECcccc---C
Confidence 998 53 567999999999874 26889999999999999999 77889999999 999999999973 2
Q ss_pred CCCCcchHHHhhhhccccCCCeEEEEecCccccC-CCCceEEEEEecChHHHHHH------------------H----Hh
Q 011570 248 KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG-FPGFRVGIIYSYNDQVVSCA------------------R----KM 304 (483)
Q Consensus 248 ~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~li~~~~~l~~~~------------------~----~~ 304 (483)
. .. .++. ..+.++++.|+||.++ .+| +||++++++.+.+.+ . ..
T Consensus 182 ~-~~-~~~~---------~~~~d~~~~s~~K~~~~~~G--~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (385)
T 2bkw_A 182 C-EE-FEFD---------EWGVDFALTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENY 248 (385)
T ss_dssp T-SC-CCTT---------TTTCSEEEEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHH
T ss_pred C-cc-cccc---------ccCceEEEecCccccccCCc--ceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhh
Confidence 2 11 1211 1245678899999654 567 499999544333021 1 11
Q ss_pred hh-----cCCCChHHHHHHHHhcCChhHHHHH-HHHHHHHHHHHHHHHHHhh-hcCCceeecC-----CceEEEeeecCc
Q 011570 305 SS-----FGLVSSQTQHLIATMLSDDQFVEKF-IAESAKRIAERHKAFTWGL-SQVGIGCLKS-----NAGLFLWMDLHH 372 (483)
Q Consensus 305 ~~-----~~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~l~~~~~~l~~~L-~~~gi~~~~~-----~~g~f~~~~l~~ 372 (483)
.. ++..+..++.++..++.. +.+. +++.+++++++++++.+.| +++|+++..+ ..++++|++++.
T Consensus 249 ~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 325 (385)
T 2bkw_A 249 EAGKGAYFATPPVQLINSLDVALKE---ILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVYVAD 325 (385)
T ss_dssp HTTCCCCSSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEECSC
T ss_pred hccCCCCCCCCCHHHHHHHHHHHHH---HHHccHHHHHHHHHHHHHHHHHHHHHhcCceecccCcccccCCceEEEecCC
Confidence 11 134566666666555532 2222 5666778889999999999 8888887653 246789998864
Q ss_pred hhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEE-ec----cCCHHHHHHHHHHHHHHHHH
Q 011570 373 LLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVC-FA----NMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 373 ~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis-~~----~~~~e~l~~~l~~L~~~l~~ 436 (483)
..++.+.|. ++||.+++|..+. ..++++||+ ++ ..+++++++++++|++++++
T Consensus 326 ---------~~~~~~~l~-~~gi~v~~g~~~~-~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 326 ---------PPDVIAFLK-SHGVVIAGGIHKD-IGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp ---------HHHHHHHHH-HTTEECBCCCCTT-TGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred ---------HHHHHHHHH-HCCeEEeCCCCcc-cCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 126677776 5699999997653 245799999 76 25889999999999987653
No 122
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.97 E-value=1.9e-29 Score=253.16 Aligned_cols=299 Identities=15% Similarity=0.128 Sum_probs=206.7
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChH--HHHhhhcCcEEEEeec
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFD--RDLRWRTGVQLVPVVC 173 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~--~~~~~~~G~~~~~v~~ 173 (483)
..++.+++.+++.+.+| .+.+.+.+++|+|+++++..++.+++++||+|+++.|+|.+.. ..+... |.+++.++.
T Consensus 50 ~~~~~~~~~~~la~~~g--~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~-g~~~~~v~~ 126 (376)
T 3f0h_A 50 FSSTMLENEKFMLEYAK--APEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHRFVQLCEIH-EIPYVALKL 126 (376)
T ss_dssp HHHHHHHHHHHHHHHHT--CCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred HHHHHHHHHHHHHHHhC--CCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeCChhhHHHHHHHHHc-CCceEEEeC
Confidence 34555666666655555 2212234556899999999999999999999999999776543 234444 999999988
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcc
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFV 253 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~ 253 (483)
+. ++.+|++.+++++. +++++|++++|+||||.+++ +++|.++|+++|+++|+|++|... . .. .
T Consensus 127 ~~--~~~~d~~~l~~~~~------~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~---~-~~-~ 190 (376)
T 3f0h_A 127 EH--GKKLTKEKLYEYDN------QNFTGLLVNVDETSTAVLYD---TMMIGEFCKKNNMFFVCDCVSAFL---A-DP-F 190 (376)
T ss_dssp CT--TCCCCHHHHHTTTT------SCCCEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTT---T-SC-C
T ss_pred CC--CCCCCHHHHHHhhc------cCceEEEEecccCCcceecC---HHHHHHHHHHcCCEEEEEcCcccc---C-cc-c
Confidence 64 56899999988653 37899999999999999999 888999999999999999999742 2 11 2
Q ss_pred hHHHhhhhccccCCCeEEEEecCccccC-CCCceEEEEEecChHHHHHHHHhh-------------------hcCCCChH
Q 011570 254 SIAEIIDQDIACNRNLIHIVYSLSKDMG-FPGFRVGIIYSYNDQVVSCARKMS-------------------SFGLVSSQ 313 (483)
Q Consensus 254 s~~~l~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~li~~~~~l~~~~~~~~-------------------~~~~~s~~ 313 (483)
.+... +..+++.|+||.++ .+| +|++++ ++.+.+.+.... ..+..+..
T Consensus 191 ~~~~~---------~~d~~~~s~~K~l~~~~G--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (376)
T 3f0h_A 191 NMNEC---------GADVMITGSQKVLACPPG--ISVIVL-APRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVG 258 (376)
T ss_dssp CHHHH---------TCSEEEEETTTTTCCCSS--CEEEEE-CHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHH
T ss_pred ccccc---------CccEEEecCcccccCCCc--eEEEEE-CHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHH
Confidence 22222 34577899999998 566 577888 455555443211 01222332
Q ss_pred HHHHHHHhcCChhHHHH--HHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHH
Q 011570 314 TQHLIATMLSDDQFVEK--FIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIIN 391 (483)
Q Consensus 314 ~q~~~~~~l~~~~~~~~--~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~ 391 (483)
.+.++.+.+. ++.+ .+++.+++++++++++.+.|.++|+++..+....+++.-.+...+ ..++.+.|.+
T Consensus 259 ~~~a~~~al~---~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~l~~ 329 (376)
T 3f0h_A 259 ILLQINERLK---EIKKHGGADAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVHPTTAN------AYDIFLKLKD 329 (376)
T ss_dssp HHHHHHHHHH---HHHHTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEEESSSC------HHHHHHHHHH
T ss_pred HHHHHHHHHH---HHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCccCccccCceEEEEeCCCCC------HHHHHHHHHH
Confidence 3233333332 1222 256677788888999999999888877654433222221222111 2367888887
Q ss_pred hcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 392 EVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 392 ~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
++||.+++|.. ...++++||+++. .+++++++++++|++++++
T Consensus 330 ~~gi~v~~g~~--~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 330 EYGIWICPNGG--EMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp HSSEECEECCG--GGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred hCCEEEecCcc--ccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 77999999842 2346789999965 5999999999999998864
No 123
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.97 E-value=8.1e-29 Score=252.74 Aligned_cols=337 Identities=13% Similarity=0.048 Sum_probs=218.1
Q ss_pred CCCcccccchh--hhhc---HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcC-
Q 011570 45 PNGVIQMGLAE--NLLC---HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFD- 118 (483)
Q Consensus 45 ~~~~i~l~~~~--n~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~- 118 (483)
...++|++.+. ++++ ++.+.+++.+... ....|+...+..+++.++++.+.+.++ .+
T Consensus 41 g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~-------------~~~~~~~~~~~~~~~~~l~~~la~~~~----~~~ 103 (419)
T 2eo5_A 41 GNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQ-------------KLAHAAANDFYNIPQLELAKKLVTYSP----GNF 103 (419)
T ss_dssp SCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHT-------------TSCCCSCSCSCCHHHHHHHHHHHHHSS----CSS
T ss_pred CCEEEEccCChhhhccCCCCCHHHHHHHHHHHh-------------hCccccccccCCHHHHHHHHHHHHhCC----CCc
Confidence 34578998877 4442 3555555543111 011122111223344444444444444 34
Q ss_pred CCcEEEeCChhHHHHHHHHHhcC-CCCeEEEeCCCCcChHHHHhhhcC-------------cEEEEeecCCCC--Ccc--
Q 011570 119 PDRIVMSGGATGAHETVAFCLAD-PGDAFLVPTPYYPGFDRDLRWRTG-------------VQLVPVVCDSSN--DFK-- 180 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~-~gd~Vlv~~P~y~~~~~~~~~~~G-------------~~~~~v~~~~~~--~~~-- 180 (483)
+++|++|+|+++++..++.++.. +||.|++.+|+|+++........| .+++.+|.++.. +|.
T Consensus 104 ~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~ 183 (419)
T 2eo5_A 104 QKKVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHIN 183 (419)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCC
T ss_pred CCEEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCcccccccccc
Confidence 78999999999999999987654 489999999999765443322111 256677764321 112
Q ss_pred ----------cCHHHHH-HHHHHHHhcCCceeEEEEeCCC-CCCcC-CCCHHHHHHHHHHHhhcCcEEEEccccccCccC
Q 011570 181 ----------VTMEALE-AAYEKAQESNIRIKGVLITNPS-NPLGT-FLDRETLKDIVSFINEKNIHLVCDEIYAATVFT 247 (483)
Q Consensus 181 ----------~d~~~l~-~~i~~~~~~~~~~~~i~l~~P~-NPtG~-~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~ 247 (483)
+|++.|+ +++++.. ...+++ +++++|+ ||||. +.+.+++++|.++|++||+++|+||+|.++.+.
T Consensus 184 ~~~~~~~~~~~~~~~l~~~~i~~~~-~~~~~~-~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~ 261 (419)
T 2eo5_A 184 GYENPSELVNRVIEFIEDYIFVNLV-PPEEVA-GIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRT 261 (419)
T ss_dssp TTTCHHHHHHHHHHHHHHTHHHHTC-CGGGEE-EEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT
T ss_pred ccccchhhHHHHHHHHHHHHHhhcc-CCCCEE-EEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccC
Confidence 4688898 8886410 001444 5667775 67896 678899999999999999999999999876444
Q ss_pred CCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHH-HhhhcCCCChHHHHHHHHhcCCh
Q 011570 248 KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCAR-KMSSFGLVSSQTQHLIATMLSDD 325 (483)
Q Consensus 248 ~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~-~~~~~~~~s~~~q~~~~~~l~~~ 325 (483)
+ .. .+.. ... ...+++ ||||.+| +| +|+||++++++.+ .+. .....+.+++++|.++.++++..
T Consensus 262 g-~~-~~~~-~~~-----~~~d~~---t~sK~~~-~G~~riG~~~~~~~~~--~~~~~~~~t~~~n~~~~~aa~aal~~~ 327 (419)
T 2eo5_A 262 G-KL-FAIE-NFN-----TVPDVI---TLAKALG-GGIMPIGATIFRKDLD--FKPGMHSNTFGGNALACAIGSKVIDIV 327 (419)
T ss_dssp S-SS-SGGG-GGT-----CCCSEE---EECGGGG-TTTSCCEEEEEEGGGC--CC------CCCCCHHHHHHHHHHHHHH
T ss_pred c-ch-hhHH-hcC-----CCCCEE---Eeccccc-CCccceEEEEEchHhh--cCCcccCCCCCCCHHHHHHHHHHHHHH
Confidence 3 21 1221 111 123332 8999999 69 9999999965433 332 22233457889998888887531
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC
Q 011570 326 QFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC 405 (483)
Q Consensus 326 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~ 405 (483)
+ +..++++++++++.+.|.++ +...++.| +|+|+++.... .... ++..|+ ++||.++|+.
T Consensus 328 ---~----~~~~~~~~~~~~l~~~L~~~-~~~~~~~g-~~~~i~~~~~~-----~~~~-~~~~l~-~~Gv~v~~~~---- 387 (419)
T 2eo5_A 328 ---K----DLLPHVNEIGKIFAEELQGL-ADDVRGIG-LAWGLEYNEKK-----VRDR-IIGESF-KRGLLLLPAG---- 387 (419)
T ss_dssp ---H----HHHHHHHHHHHHHHHHHTTS-SSEEEEET-TEEEEECSCHH-----HHHH-HHHHHH-HTTEECEEET----
T ss_pred ---H----HHHHHHHHHHHHHHHHHHHh-hhheEeee-EEEEEEEecCc-----cHHH-HHHHHH-HCCCEEecCC----
Confidence 2 25677888889999999876 44445554 58888884210 1133 677777 5699999863
Q ss_pred CCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 406 PNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 406 ~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
++++||+++. .+++++++++++|++++++
T Consensus 388 --~~~lRis~~~~~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 388 --RSAIRVIPPLVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp --TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred --CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 4689998864 5999999999999998865
No 124
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.97 E-value=2e-29 Score=254.61 Aligned_cols=282 Identities=15% Similarity=0.131 Sum_probs=202.5
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCC----------CCeEEEeCCCCcChHHHHhhhcC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADP----------GDAFLVPTPYYPGFDRDLRWRTG 165 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~----------gd~Vlv~~P~y~~~~~~~~~~~G 165 (483)
..++++.++++++ ++++++|+|+++++..++.++..+ +|.|+++.|+|+++...+....+
T Consensus 80 ~~~l~~~la~~~g----------~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~ 149 (392)
T 3ruy_A 80 LGPWYEKVAKLTN----------KEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSS 149 (392)
T ss_dssp HHHHHHHHHHHHT----------CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCS
T ss_pred HHHHHHHHHHhcC----------CCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccC
Confidence 4566666666543 679999999999999999887644 68999999999776554433312
Q ss_pred c------------EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHH-HHHHHHHHhhcC
Q 011570 166 V------------QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRET-LKDIVSFINEKN 232 (483)
Q Consensus 166 ~------------~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~-l~~i~~~a~~~~ 232 (483)
. .+..++. .|+++|+++++ .++++|++++|+||||.+++.++ +++|+++|++||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~------~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~ 216 (392)
T 3ruy_A 150 NEEYKRGFGPMLPGIIVIPY-------GDLEALKAAIT------PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKEN 216 (392)
T ss_dssp CTTTTTTCCSCCSSEEEECT-------TCHHHHHHHCC------TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTT
T ss_pred ChhhccccCCCCCCCeeeCc-------ccHHHHHHHhc------cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 1 2333332 27899998886 37999999999999999996555 999999999999
Q ss_pred cEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHhhh--cCC
Q 011570 233 IHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKMSS--FGL 309 (483)
Q Consensus 233 ~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~~~--~~~ 309 (483)
+++|+||+|.++.+.+ .. .+.. ... ...+++ ||||.++ +| +|+||+++ ++.+.+.+..... .+.
T Consensus 217 ~~li~De~~~~~~~~g-~~-~~~~-~~~-----~~~d~~---~~SK~l~-gG~~~~G~~~~-~~~~~~~~~~~~~~~~~~ 283 (392)
T 3ruy_A 217 VLFVADEIQTGLGRTG-KV-FACD-WDN-----VTPDMY---ILGKALG-GGVFPISCAAA-NRDILGVFEPGSHGSTFG 283 (392)
T ss_dssp CEEEEECTTTTTTTTS-SS-SGGG-GGT-----CCCSEE---EECGGGG-TTTSCCEEEEE-CHHHHTTCCTTSSCCSST
T ss_pred CEEEEeechhCCCccc-cc-hhhh-ccC-----CCCCEE---EEchhhh-CChhhhEEEEE-CHHHHhhhccCCcCCCCC
Confidence 9999999998754444 22 2211 111 112332 7899886 57 99999999 4555544433222 245
Q ss_pred CChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC---ceeecCCceEEEeeecCchhhccChHHHHHHH
Q 011570 310 VSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVG---IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALW 386 (483)
Q Consensus 310 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g---i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~ 386 (483)
.+++++.++.++++.. .. ++.+++++++++++.+.|++++ +....+.++ |+++.++. + ..++.
T Consensus 284 ~~~~~~~a~~~~l~~~---~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~-~~~~~~~~--~------~~~l~ 349 (392)
T 3ruy_A 284 GNPLACAVSIAALEVL---EE--EKLTERSLQLGEKLVGQLKEIDNPMITEVRGKGL-FIGIELNE--P------ARPYC 349 (392)
T ss_dssp TCHHHHHHHHHHHHHH---HH--TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEETT-EEEEEESS--C------SHHHH
T ss_pred CCHHHHHHHHHHHHHH---Hh--hhHHHHHHHHHHHHHHHHHHhcCCCceEEEeeee-EEEEEEcc--h------HHHHH
Confidence 6888888888777532 11 4566778888899999998875 455556655 56666764 1 22667
Q ss_pred HHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 387 RVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 387 ~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
+.|. ++||.+.||. ++++|++++. .+++++++++++|++++
T Consensus 350 ~~l~-~~gi~v~~~~------~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 350 EQLK-AAGLLCKETH------ENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp HHHH-TTTEECCCBT------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHH-HCCcEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 7776 6799999874 5789999755 59999999999999876
No 125
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.97 E-value=7e-29 Score=251.67 Aligned_cols=279 Identities=14% Similarity=0.113 Sum_probs=197.4
Q ss_pred CCcEEEeCChhHHHHHHHHHhcC-------CC-CeEEEeCCCCcChHHHHhhhcC------------cEEEEeecCCCCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLAD-------PG-DAFLVPTPYYPGFDRDLRWRTG------------VQLVPVVCDSSND 178 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~P~y~~~~~~~~~~~G------------~~~~~v~~~~~~~ 178 (483)
.++|++|+|+++++..++.+++. +| |.|++++|+|+.+........+ .++..++.
T Consensus 96 ~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 170 (406)
T 4adb_A 96 ADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY----- 170 (406)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-----
T ss_pred CCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-----
Confidence 45999999999999999998865 66 9999999999988655544422 23334432
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC--CHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHH
Q 011570 179 FKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL--DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIA 256 (483)
Q Consensus 179 ~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~--~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~ 256 (483)
.|+++|++++. .++++|+++ |+||||.++ +.+++++|+++|++||++||+||+|.++.+.+ .. .+..
T Consensus 171 --~d~~~l~~~l~------~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g-~~-~~~~ 239 (406)
T 4adb_A 171 --NDINSASALID------DSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTG-EL-YAYM 239 (406)
T ss_dssp --TCHHHHHTTCS------TTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS-SS-SHHH
T ss_pred --CcHHHHHHHhc------CCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-hh-HHHH
Confidence 37889988875 278888888 999999998 99999999999999999999999998755544 32 2322
Q ss_pred HhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--hcCCCChHHHHHHHHhcCChhHHHHHHHH
Q 011570 257 EIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--SFGLVSSQTQHLIATMLSDDQFVEKFIAE 334 (483)
Q Consensus 257 ~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 334 (483)
.. . ...+++ ||||.++ +|+|+||+++ ++.+.+.+.... ..+..+++++.++.+.+..... ++
T Consensus 240 ~~-~-----~~~d~~---t~sK~~~-~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~ 303 (406)
T 4adb_A 240 HY-G-----VTPDLL---TTAKALG-GGFPVGALLA-TEECARVMTVGTHGTTYGGNPLASAVAGKVLELINT-----PE 303 (406)
T ss_dssp HH-T-----CCCSEE---EECGGGG-TTSCCEEEEE-CHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS-----HH
T ss_pred hc-C-----CCCCEE---Eechhhc-CCCCeEEEEE-cHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh-----cC
Confidence 22 1 123333 7799999 9999999999 566655443322 1244678888887776643211 33
Q ss_pred HHHHHHHHHHHHHHhhhcCC----ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCE
Q 011570 335 SAKRIAERHKAFTWGLSQVG----IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGW 410 (483)
Q Consensus 335 ~~~~l~~~~~~l~~~L~~~g----i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~ 410 (483)
..++++++++++.+.|++.+ .....+..|+++|+.++.... ....++++.|+++ ||.+.|+. +++
T Consensus 304 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~l~~~-gi~v~~~~------~~~ 372 (406)
T 4adb_A 304 MLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYA----GQAKQISQEAAKA-GVMVLIAG------GNV 372 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTTT----TCHHHHHHHHHHT-TEECEESS------TTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCcH----HHHHHHHHHHHHC-CcEEeecC------CCe
Confidence 44555666666666666542 111222345788998875321 0133677777765 99999863 578
Q ss_pred EEEEecc-CCHHHHHHHHHHHHHHHHHhhhc
Q 011570 411 FRVCFAN-MDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 411 iRis~~~-~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
+|++++. .+++++++++++|++++++..++
T Consensus 373 iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~ 403 (406)
T 4adb_A 373 VRFAPALNVSEEEVTTGLDRFAAACEHFVSR 403 (406)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 9997654 59999999999999999877543
No 126
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.97 E-value=1.3e-29 Score=256.53 Aligned_cols=285 Identities=13% Similarity=0.116 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC------C-CCeEEEeCCCCcChH-HHHhhhcCcE--
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD------P-GDAFLVPTPYYPGFD-RDLRWRTGVQ-- 167 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~------~-gd~Vlv~~P~y~~~~-~~~~~~~G~~-- 167 (483)
++++++++.+.+.+| +++|++|+|+++++..++.++.. + ++.|++.+|+|+... ..+... |.+
T Consensus 82 ~~~~~l~~~la~~~g------~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~-g~~~~ 154 (397)
T 2ord_A 82 RPQMELAELLSKNTF------GGKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTAT-GQPKY 154 (397)
T ss_dssp HHHHHHHHHHHHTTT------SCEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHS-BCHHH
T ss_pred HHHHHHHHHHHHhcC------CCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhcc-CChhh
Confidence 444455555444332 57999999999999999988763 5 478999999996543 355543 665
Q ss_pred ----------EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcC-CCCHHHHHHHHHHHhhcCcEEE
Q 011570 168 ----------LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGT-FLDRETLKDIVSFINEKNIHLV 236 (483)
Q Consensus 168 ----------~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~-~~~~~~l~~i~~~a~~~~~~iI 236 (483)
++.++. .|+++|++++++ ++++|++++|+||||. +++.+++++|+++|+++|+++|
T Consensus 155 ~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li 221 (397)
T 2ord_A 155 QKPFEPLVPGFEYFEF-------NNVEDLRRKMSE------DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLV 221 (397)
T ss_dssp HGGGCSCCTTEEEECT-------TCHHHHHHHCCT------TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEE
T ss_pred ccccCCCCCCeeEecC-------CCHHHHHHHhhc------CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 666664 278999888753 7899999999999999 9999999999999999999999
Q ss_pred EccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH--hhhcCCCChHH
Q 011570 237 CDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK--MSSFGLVSSQT 314 (483)
Q Consensus 237 ~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~--~~~~~~~s~~~ 314 (483)
+||+|.++.+.+ . +.++..+.. . .+++ ||||.++ +|+|+||++++++. . .+.. ....+..++++
T Consensus 222 ~De~~~~~~~~g-~-~~~~~~~~~-----~-~d~~---s~sK~~~-~G~r~G~~~~~~~~-~-~l~~~~~~~~~~~~~~~ 287 (397)
T 2ord_A 222 FDEVQCGMGRTG-K-LFAYQKYGV-----V-PDVL---TTAKGLG-GGVPIGAVIVNERA-N-VLEPGDHGTTFGGNPLA 287 (397)
T ss_dssp EECTTTTTTTTS-S-SSHHHHHTC-----C-CSEE---EECGGGG-TTSCCEEEEECSTT-C-CCCTTSSCCSSTTCHHH
T ss_pred EEecccCCccCc-c-chhhhhhCC-----C-CCee---eeccccC-CCcCeEEEEEchHh-c-ccCCCCcCCCCCCCHHH
Confidence 999998754443 2 233333321 1 2222 8899999 99999999996553 3 3321 11123467888
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC--Ccee---ecCCceEEEeeecCchhhccChHHHHHHHHHH
Q 011570 315 QHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV--GIGC---LKSNAGLFLWMDLHHLLKEQTYEAEMALWRVI 389 (483)
Q Consensus 315 q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--gi~~---~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~L 389 (483)
+.++.++++... + ++.+++++++++++.+.|++. +++. .++. |.|+|++++...+ ..++++.|
T Consensus 288 ~~a~~~~l~~~~---~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~------~~~l~~~l 355 (397)
T 2ord_A 288 CRAGVTVIKELT---K--EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGM-GLMIGIQFREEVS------NREVATKC 355 (397)
T ss_dssp HHHHHHHHHHHT---S--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEEECTTSC------HHHHHHHH
T ss_pred HHHHHHHHHHHH---h--CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEE-eEEEEEEECChHH------HHHHHHHH
Confidence 887777664321 1 234556667777777777664 2332 2344 4688888874211 23677777
Q ss_pred HHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHH
Q 011570 390 INEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFML 435 (483)
Q Consensus 390 l~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~ 435 (483)
++ +||.+.||. ++++||+++. .+++++++++++|+++++
T Consensus 356 ~~-~gi~v~~~~------~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 356 FE-NKLLVVPAG------NNTIRFLPPLTVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp HH-TTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HH-CCCEEccCC------CCEEEEECCcCCCHHHHHHHHHHHHHHHh
Confidence 76 699999872 5689999754 599999999999998875
No 127
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.97 E-value=2.3e-30 Score=261.94 Aligned_cols=293 Identities=13% Similarity=0.111 Sum_probs=196.2
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc----CCCC-eEEEeCCCCcChHHHHhhh--cCcEE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA----DPGD-AFLVPTPYYPGFDRDLRWR--TGVQL 168 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~----~~gd-~Vlv~~P~y~~~~~~~~~~--~G~~~ 168 (483)
..++++.++++++ +++++|++|+|+++++..++.+++ ++|| .|+++.++|+.+...+... .|+++
T Consensus 65 ~~~l~~~la~~~~--------~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~ 136 (400)
T 3vax_A 65 VERAREYLASTVS--------AEPDELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEV 136 (400)
T ss_dssp HHHHHHHHHHHTT--------CCGGGEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHcC--------CCCCcEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeE
Confidence 3455666666554 567899999999999999999998 8999 9999999999877665542 49999
Q ss_pred EEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCC
Q 011570 169 VPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTK 248 (483)
Q Consensus 169 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~ 248 (483)
+.+++++ ++.+|+++|++++.+ ++++|++++|+||||.+++ +++|+++|+++|++||+||+|+. ..
T Consensus 137 ~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~---~~ 202 (400)
T 3vax_A 137 DFLTPGP--SGRISVEGVMERLRP------DTLLVSLMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGY---GK 202 (400)
T ss_dssp EEECCCT--TCCCCHHHHHTTCCT------TEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTT---TT
T ss_pred EEEccCC--CCCcCHHHHHHhcCC------CceEEEEECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhc---CC
Confidence 9999875 568899999998853 7899999999999999999 78889999999999999999973 21
Q ss_pred CCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEE-ecChHH-------HHHHH-----HhhhcCCCChHHH
Q 011570 249 ESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIY-SYNDQV-------VSCAR-----KMSSFGLVSSQTQ 315 (483)
Q Consensus 249 ~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li-~~~~~l-------~~~~~-----~~~~~~~~s~~~q 315 (483)
.. .+ +. .. ..+++.|+||.+|.+| +|+++ ++++.+ ..... .....+..+...+
T Consensus 203 -~~-~~---~~------~~-~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (400)
T 3vax_A 203 -VP-GD---LT------TP-IDMISISGHKIGAPKG--VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLI 268 (400)
T ss_dssp -SG-GG---GG------SC-CSEEEEETGGGTSCSS--CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHH
T ss_pred -CC-cC---hh------hc-CcEEEEeHHHhCCCCc--eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHH
Confidence 11 11 11 12 4578899999887666 56666 655211 11110 0011233455666
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCc---eEEEeeecCchhhccChHHHHHHHHHHHHh
Q 011570 316 HLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNA---GLFLWMDLHHLLKEQTYEAEMALWRVIINE 392 (483)
Q Consensus 316 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~---g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~ 392 (483)
.++..++. .+.+++++.+++++++++++.+.|+..|+++..+.+ +.++++.++.. + ..++.+.|.
T Consensus 269 ~a~~~al~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~l~~~L~-- 336 (400)
T 3vax_A 269 MGLAEAAK---IFEAEHAQWQVAAQDLRSRLLAGLASTSFQVNGDQDHVVPHILNLSFEDV-D------AEAFLVTLK-- 336 (400)
T ss_dssp HHHHHHHH---HHHHSHHHHHHHHHHHHHHHHHHHTTTTCEECSCTTSBCTTEEEEECTTC-C------HHHHHHHHH--
T ss_pred HHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHhhCCCCEEEeCCcccCCCCEEEEEeCCC-C------HHHHHHHHh--
Confidence 65555553 223456777888899999999999833888876654 34677777631 1 236667666
Q ss_pred cCeEeeCCCCCCCC-------------C----CCEEEEEe-cc-CCHHHHHHHHHHHHHHHHH
Q 011570 393 VKLNVSPGSSFHCP-------------N----PGWFRVCF-AN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 393 ~gV~v~pg~~f~~~-------------~----~~~iRis~-~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
+||.+++|..|... . ++++||++ +. .+++++++++++|++++++
T Consensus 337 ~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 337 DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 59999998755421 1 47999999 65 4889999999999988753
No 128
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.96 E-value=2.7e-28 Score=247.08 Aligned_cols=280 Identities=18% Similarity=0.145 Sum_probs=193.1
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH----hhhcCcEEEE
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----RWRTGVQLVP 170 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----~~~~G~~~~~ 170 (483)
+..++++.++++++ .+ ++++++++++++..++.+++++||+|+++.|+|+.+...+ ... |.+++.
T Consensus 65 ~~~~l~~~la~~~g--------~~--~~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~-g~~~~~ 133 (398)
T 2rfv_A 65 TTDALEKKLAVLER--------GE--AGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKF-GINVRF 133 (398)
T ss_dssp HHHHHHHHHHHHHT--------CS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHT-TCEEEE
T ss_pred HHHHHHHHHHHHhC--------CC--cEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHc-CCEEEE
Confidence 45677777777764 22 5556666669999999999999999999999999888766 554 999999
Q ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCC
Q 011570 171 VVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKES 250 (483)
Q Consensus 171 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~ 250 (483)
++.+ |++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|....+..
T Consensus 134 v~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~-- 195 (398)
T 2rfv_A 134 VDAA-------KPEEIRAAMRP------ETKVVYIETPANPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQQ-- 195 (398)
T ss_dssp ECTT-------SHHHHHHHCCT------TEEEEEEESSBTTTTBCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC--
T ss_pred eCCC-------CHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC--
Confidence 8863 78899888753 7899999999999999998 8889999999999999999998654321
Q ss_pred CcchHHHhhhhccccCCCeEEEEecCccccCCCCceE-EEEEecChHHHHHHHHhh-hc--CCCChHHHHHHHHhcCChh
Q 011570 251 SFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRV-GIIYSYNDQVVSCARKMS-SF--GLVSSQTQHLIATMLSDDQ 326 (483)
Q Consensus 251 ~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRi-G~li~~~~~l~~~~~~~~-~~--~~~s~~~q~~~~~~l~~~~ 326 (483)
+ ..+ +.++++.|+||.++.+|+|+ ||++++++.+.+.+.... .+ +..+++.+.++.+.++..
T Consensus 196 ---~-~~~---------~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 261 (398)
T 2rfv_A 196 ---P-LQL---------GADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKTL- 261 (398)
T ss_dssp ---G-GGG---------TCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTTH-
T ss_pred ---c-hhh---------CCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhhH-
Confidence 1 111 45688999999998899998 999995443332443322 22 356778888887777652
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcC---------------CceeecC---CceEEEeeecCchhhccChHHHHHHHHH
Q 011570 327 FVEKFIAESAKRIAERHKAFTWGLSQV---------------GIGCLKS---NAGLFLWMDLHHLLKEQTYEAEMALWRV 388 (483)
Q Consensus 327 ~~~~~~~~~~~~l~~~~~~l~~~L~~~---------------gi~~~~~---~~g~f~~~~l~~~~~~~~~~~~~~~~~~ 388 (483)
..+++ .+.++.+.+.+.|++. ++++..+ ..|.+++++++... +....
T Consensus 262 --~~~~~----~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~---------~~~~~ 326 (398)
T 2rfv_A 262 --GIRME----RHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGL---------EAGRR 326 (398)
T ss_dssp --HHHHH----HHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH---------HHHHH
T ss_pred --HHHHH----HHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCH---------HHHHH
Confidence 22222 2344445555555543 2333322 13446666887420 11223
Q ss_pred HHHhc---CeEeeCCCCCC---------------------CCCCCEEEEEeccC-CHHHHHHHHHHHHH
Q 011570 389 IINEV---KLNVSPGSSFH---------------------CPNPGWFRVCFANM-DDRTMEIALSRITS 432 (483)
Q Consensus 389 Ll~~~---gV~v~pg~~f~---------------------~~~~~~iRis~~~~-~~e~l~~~l~~L~~ 432 (483)
++++. ||.+++|..|. ...++++||+++.. ++++++.++++|++
T Consensus 327 l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 395 (398)
T 2rfv_A 327 MINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRK 395 (398)
T ss_dssp HHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Confidence 34333 88888886542 01257999999863 56666666666654
No 129
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.96 E-value=2.8e-29 Score=250.34 Aligned_cols=327 Identities=16% Similarity=0.131 Sum_probs=216.2
Q ss_pred cccccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeC
Q 011570 48 VIQMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSG 126 (483)
Q Consensus 48 ~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~ 126 (483)
.+.++.++|+++ ++.+.+++.+. .....|++..+..+|++.++++++ . +..++++
T Consensus 15 ~~~~~~~~~~~g~~p~v~~ai~~~--------------~~~~~~~~~~~~~~l~~~la~~~~--------~--~~~i~~~ 70 (359)
T 3pj0_A 15 YKLGGNGPRNVGVLTEALQNIDDN--------------LESDIYGNGAVIEDFETKIAKILG--------K--QSAVFFP 70 (359)
T ss_dssp EESSSSSCCBHHHHHHHTTTSCTT--------------CBCCBTTBSHHHHHHHHHHHHHHT--------C--SEEEEES
T ss_pred hhhcCCCccccCCCHHHHHHHHhh--------------cccCcccCCHHHHHHHHHHHHHhC--------C--CcEEEeC
Confidence 356677777775 23333333221 112356666678899999999876 1 2235557
Q ss_pred ChhHHHHHHHHHhcCCCCe--EEEeCCCCcChHH--HH-hhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCcee
Q 011570 127 GATGAHETVAFCLADPGDA--FLVPTPYYPGFDR--DL-RWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIK 201 (483)
Q Consensus 127 G~~~al~~~~~~l~~~gd~--Vlv~~P~y~~~~~--~~-~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 201 (483)
|+++++..++.+++.+||. |+++.++|..+.. .. ... |.+++.++.+ ++.+|+++|+++ . .+++
T Consensus 71 ~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~---~~~~d~~~l~~~-~------~~~~ 139 (359)
T 3pj0_A 71 SGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQ-QITPLLLGTA---NQLLTIDDIKSL-R------EPVS 139 (359)
T ss_dssp CHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHH-CCEEEECSCT---TSCCCHHHHHTC-S------SCCS
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEeccceeeehhcchHHHhc-CceEEecCCc---CCCcCHHHHHhc-c------CCce
Confidence 8889999999999989887 5555555433221 12 344 9999998863 467999999876 2 3789
Q ss_pred EEEEeCCCCCC-cCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCcccc
Q 011570 202 GVLITNPSNPL-GTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDM 280 (483)
Q Consensus 202 ~i~l~~P~NPt-G~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~ 280 (483)
+|+++|||||| |.+++.+++++|+++|++||++||+|++|....... .. .+...+.. ..+ +++.|+||.+
T Consensus 140 ~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~-~~-~~~~~~~~-----~~d--~~~~s~sK~~ 210 (359)
T 3pj0_A 140 SVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPF-YQ-KSAEEICA-----LFD--SVYVSFYKGI 210 (359)
T ss_dssp EEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHH-HT-CCHHHHHT-----TCS--EEEEESSSTT
T ss_pred EEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhh-hC-CCHHHhhc-----cCC--EEEEeccccC
Confidence 99999999998 799999999999999999999999999986432111 00 12333322 123 3456999998
Q ss_pred CCCCceEEEEEecChHHHHHHHHhhh-cC-CC--ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cc
Q 011570 281 GFPGFRVGIIYSYNDQVVSCARKMSS-FG-LV--SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GI 355 (483)
Q Consensus 281 g~~GlRiG~li~~~~~l~~~~~~~~~-~~-~~--s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi 355 (483)
+.++ . ||+++ ++.+.+.+..... ++ .. ..+.+.++...+ +.+. +..+++.++++++.+.|.++ |+
T Consensus 211 ~~~~-g-g~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l------~~~~-~~~~~~~~~~~~l~~~L~~~~g~ 280 (359)
T 3pj0_A 211 GGIA-G-AILAG-NDDFVQEAKIWKRRYGGDLISLYPYILSADYYF------EKRI-GKMAEYFEAAKGLAERFNSCSGV 280 (359)
T ss_dssp CCSS-C-EEEEE-CHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHH------HHHG-GGHHHHHHHHHHHHHHHHTSTTE
T ss_pred CCcc-e-EEEEC-CHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHH------HHHH-HHhHHHHHHHHHHHHHHhhCCCc
Confidence 7553 3 78887 5666666554322 21 12 222222222222 2222 23344677788899999988 88
Q ss_pred eee-cCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc----CCHHHHHHHHHHH
Q 011570 356 GCL-KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN----MDDRTMEIALSRI 430 (483)
Q Consensus 356 ~~~-~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~----~~~e~l~~~l~~L 430 (483)
++. .+.+++|+|++++.... .....+.+.|. ++||.++||..|+..+.+++|++++. .+.+++++++++|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~l~-~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l 355 (359)
T 3pj0_A 281 KTVPEVPVSNMFHVYFENSAD----EIGAILTKIQD-ETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCL 355 (359)
T ss_dssp EEESSSCSSSEEEEEESSCHH----HHHHHHHHHHH-HHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHH
T ss_pred eeeccCCcceEEEEEecCccc----hhHHHHHHHHH-hcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHH
Confidence 885 45666788888864211 11235555555 56999999988876556789999862 4789999999999
Q ss_pred HHH
Q 011570 431 TSF 433 (483)
Q Consensus 431 ~~~ 433 (483)
.+.
T Consensus 356 ~~~ 358 (359)
T 3pj0_A 356 EKE 358 (359)
T ss_dssp HHH
T ss_pred Hhc
Confidence 865
No 130
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.96 E-value=3.4e-29 Score=249.65 Aligned_cols=297 Identities=15% Similarity=0.127 Sum_probs=204.2
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCC--eEEEeCCCCcChHH---HHhh
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGD--AFLVPTPYYPGFDR---DLRW 162 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd--~Vlv~~P~y~~~~~---~~~~ 162 (483)
..|++..+..+|++.++++++ . +..++++|+++++..++.+++.+|| .|+++.++|..... ....
T Consensus 41 ~~y~~~~~~~~l~~~la~~~~--------~--~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~ 110 (357)
T 3lws_A 41 DQYGTGAIIEPFEQKFADVLG--------M--DDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKEL 110 (357)
T ss_dssp EETTEETTHHHHHHHHHHHHT--------C--SEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHH
T ss_pred ccccCChHHHHHHHHHHHHhC--------C--CcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhc
Confidence 457766788999999999986 1 2335557778899999999999998 67776666543332 2334
Q ss_pred hcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCC-cCCCCHHHHHHHHHHHhhcCcEEEEcccc
Q 011570 163 RTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPL-GTFLDRETLKDIVSFINEKNIHLVCDEIY 241 (483)
Q Consensus 163 ~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPt-G~~~~~~~l~~i~~~a~~~~~~iI~Deay 241 (483)
.|+++++++.+ ++.+|+++|+++ .++++|++++||||| |.+++.+++++|+++|++||++||+||+|
T Consensus 111 -~g~~~~~v~~~---~~~~d~~~l~~~--------~~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~ 178 (357)
T 3lws_A 111 -HPIETILVGAA---DRLMTLDEIKAL--------PDIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGAR 178 (357)
T ss_dssp -SSCEEEECSCT---TSCCCHHHHHTC--------CSCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred -cCcEEEEecCC---CCCcCHHHHhcC--------cCcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECch
Confidence 48999888843 356999999875 147899999999998 99999999999999999999999999998
Q ss_pred ccCc--cCCCCCcchHHHhhhhccccCCCeEEEEecCcccc-CCCCceEEEEEecChHHHHHHHHhhhc-C-CC--ChHH
Q 011570 242 AATV--FTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDM-GFPGFRVGIIYSYNDQVVSCARKMSSF-G-LV--SSQT 314 (483)
Q Consensus 242 ~~~~--~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~li~~~~~l~~~~~~~~~~-~-~~--s~~~ 314 (483)
.... +.+ . +...+.. ..+. ++.|+||.+ |+.| ||+++ ++.+.+.+...... + .. ..+.
T Consensus 179 ~~~~~~~~~-~---~~~~~~~-----~~d~--~~~s~sK~~~~~~g---g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (357)
T 3lws_A 179 LFEMLPYYE-K---TAAEIAG-----LFDS--IYISFYKGLGGIAG---AILAG-PAAFCQTARIWKRRYGGDLISLYPY 243 (357)
T ss_dssp HHHHHHHHT-C---CHHHHHT-----TSSE--EEEESSSTTCCSSC---EEEEE-CHHHHHHHHHHHHHTTCCCSCCHHH
T ss_pred hhhhhhhcC-C---ChHHHHh-----cCCE--EEEeccccCCCCce---EEEEc-CHHHHHHHHHHHHHhcCCcccchHH
Confidence 6211 112 1 2333322 2243 368999999 4344 99998 56666655543322 1 11 2333
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceee-cCCceEEEeeecCchhhccChHHHHHHHHHHHHh
Q 011570 315 QHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCL-KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINE 392 (483)
Q Consensus 315 q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~-~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~ 392 (483)
+.++...+. .+.+. .+.+.++++++.+.|.++ |+++. .+.+++|+|++++.... ....++.+.|. +
T Consensus 244 ~~~~~~~l~------~~~~~-~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~-~ 311 (357)
T 3lws_A 244 IVSADYYYE------LRKDR-MGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAA----DISPKLEQVQE-E 311 (357)
T ss_dssp HHHHHHHHH------HHTTC-HHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHH----HHHHHHHHHHH-H
T ss_pred HHHHHHHHH------HHHHH-HHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChH----HHHHHHHHHHH-h
Confidence 333223322 22222 233567778899999988 88884 56667899999975311 11235555555 5
Q ss_pred cCeEeeCCCCCCCCCCCEEEEEecc----CCHHHHHHHHHHHHHHH
Q 011570 393 VKLNVSPGSSFHCPNPGWFRVCFAN----MDDRTMEIALSRITSFM 434 (483)
Q Consensus 393 ~gV~v~pg~~f~~~~~~~iRis~~~----~~~e~l~~~l~~L~~~l 434 (483)
+||.++||..|. ++.+++|++++. .+++++++++++|++++
T Consensus 312 ~Gi~v~~g~~~~-~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 312 TGLGFVGYLVDK-DGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp HCEESCSCCEEC-SSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred cCeEEecccccC-CCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 699999997665 344589999863 37899999999998764
No 131
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.96 E-value=9.4e-29 Score=250.57 Aligned_cols=326 Identities=14% Similarity=0.155 Sum_probs=228.4
Q ss_pred CCcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEe
Q 011570 46 NGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMS 125 (483)
Q Consensus 46 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it 125 (483)
.++|||+.++++++ +.+.+++.+. + ....|++..+..+++++++++++ . ++++++
T Consensus 30 ~~~id~~~~~~~~~-~~v~~a~~~~-------------~-~~~~y~~~~~~~~l~~~la~~~~--------~--~~~v~~ 84 (399)
T 2oga_A 30 VPFLDLKAAYEELR-AETDAAIARV-------------L-DSGRYLLGPELEGFEAEFAAYCE--------T--DHAVGV 84 (399)
T ss_dssp BCSCCHHHHHHHTH-HHHHHHHHHH-------------H-HHTCCSSSHHHHHHHHHHHHHTT--------S--SEEEEE
T ss_pred CcccccCcCCCCCC-HHHHHHHHHH-------------H-hcCCCCCchhHHHHHHHHHHHHC--------C--CeEEEe
Confidence 36789999988776 4444444331 0 01246655678999999999976 1 267778
Q ss_pred CChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 126 GGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 126 ~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
+|+++++..++.++ +++||+|+++.|+|+.+...++.. |.+++.++++++ ++.+|++.|++++.+ ++++|+
T Consensus 85 ~~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~-~~~~d~~~l~~~i~~------~~~~v~ 156 (399)
T 2oga_A 85 NSGMDALQLALRGLGIGPGDEVIVPSHTYIASWLAVSAT-GATPVPVEPHED-HPTLDPLLVEKAITP------RTRALL 156 (399)
T ss_dssp SCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHT-TCEEEEECBCSS-SSSBCHHHHHHHCCT------TEEEEC
T ss_pred cCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHHHHC-CCEEEEEecCCC-CCCcCHHHHHHhcCC------CCeEEE
Confidence 88899999999999 899999999999999999988876 999999998753 578999999998853 677766
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc-cCCCCCcchHHHhhhhccccCCCeEEEEecC--ccccC
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV-FTKESSFVSIAEIIDQDIACNRNLIHIVYSL--SKDMG 281 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~-~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~--SK~~g 281 (483)
|+||||.+.+ +++|.++|+++|++||+||+|..+. ++. . . +. .. ..+++.|+ ||.+|
T Consensus 157 ---~~n~tG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~-~---~---~~------~~-~di~~~S~~~sK~~~ 216 (399)
T 2oga_A 157 ---PVHLYGHPAD---MDALRELADRHGLHIVEDAAQAHGARYRG-R---R---IG------AG-SSVAAFSFYPGKNLG 216 (399)
T ss_dssp ---CBCGGGCCCC---HHHHHHHHHHHTCEECEECTTCTTCEETT-E---E---TT------CT-TCEEEEECCTTSSSC
T ss_pred ---EeCCcCCccC---HHHHHHHHHHcCCEEEEECcccccCccCC-e---e---cc------cc-cCEEEEeCCCCccCC
Confidence 6789999988 7888899999999999999998542 222 1 1 10 11 23678888 79999
Q ss_pred CCCceEEEEEecChHHHHHHHHhhhc--------------CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHH
Q 011570 282 FPGFRVGIIYSYNDQVVSCARKMSSF--------------GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFT 347 (483)
Q Consensus 282 ~~GlRiG~li~~~~~l~~~~~~~~~~--------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~ 347 (483)
.+| |+||++++++.+.+.+...... +.++++.+.++.+.+.. +++..++.++.++++.
T Consensus 217 ~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~-------~~~~~~~~~~~~~~l~ 288 (399)
T 2oga_A 217 CFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH-------LDSWNGRRSALAAEYL 288 (399)
T ss_dssp CSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHH
T ss_pred cCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
Confidence 779 9999999667776665543322 12455555555444433 1223334455667788
Q ss_pred HhhhcC-Cceee-cCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCC-----------CC--------
Q 011570 348 WGLSQV-GIGCL-KSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFH-----------CP-------- 406 (483)
Q Consensus 348 ~~L~~~-gi~~~-~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~-----------~~-------- 406 (483)
+.|.++ |+++. .+.++.++|+.++.... +..++.+.|.+ +||.++++.... ..
T Consensus 289 ~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 362 (399)
T 2oga_A 289 SGLAGLPGIGLPVTAPDTDPVWHLFTVRTE-----RRDELRSHLDA-RGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAE 362 (399)
T ss_dssp HHTTTCTTCBCCCCCTTEECCCSSEEEECS-----SHHHHHHHHHH-TTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHH
T ss_pred HHhccCCCccccCCCCCCcceeEEEEEECC-----CHHHHHHHHHH-CCCceecCCCCccccchhhcccCCCCCCChhHH
Confidence 888877 77664 34556666643332110 12366777764 699998753110 00
Q ss_pred --CCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 407 --NPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 407 --~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
..+++||+++. .++++++.++++|++++++.+
T Consensus 363 ~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l~ 397 (399)
T 2oga_A 363 SFARQVLSLPIGPHLERPQALRVIDAVREWAERVD 397 (399)
T ss_dssp HHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSCC
T ss_pred HHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 02579999965 599999999999999887543
No 132
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.96 E-value=7.3e-29 Score=253.83 Aligned_cols=294 Identities=14% Similarity=0.097 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--------CCCCeEEEeCCCCcCh------------
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--------DPGDAFLVPTPYYPGF------------ 156 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--------~~gd~Vlv~~P~y~~~------------ 156 (483)
.++|+.+|++++ +++++|++|+|+++++..++.+++ ++||+|+++.|+|..+
T Consensus 64 ~~l~~~la~~~g--------~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s 135 (432)
T 3a9z_A 64 NTARASLAKMIG--------GKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDS 135 (432)
T ss_dssp HHHHHHHHHHHT--------CCGGGEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHH
T ss_pred HHHHHHHHHHcC--------CCcCeEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchh
Confidence 588888888876 467899999999999999999886 5899999999999875
Q ss_pred -----HHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc
Q 011570 157 -----DRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK 231 (483)
Q Consensus 157 -----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~ 231 (483)
....+. .|.+++.++++++ ++.+|++.|++++.+ ++++|++++|+||||.+++ +++|.++|+++
T Consensus 136 ~~~~~~~~~~~-~g~~v~~v~~~~~-~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~ 204 (432)
T 3a9z_A 136 IRLPLEHLVED-QVAEVTFVPVSKV-NGQVEVEDILAAVRP------TTCLVTIMLANNETGVIMP---ISEISRRIKAL 204 (432)
T ss_dssp HHHHHHHHHHT-TSCEEEEECCCTT-TSSCCHHHHHHTCCT------TEEEEECCSBCTTTCBBCC---HHHHHHHHHHH
T ss_pred HHHHHHHHHHh-cCcEEEEEecCcc-cCCcCHHHHHHhccC------CceEEEEECcccCcccccC---HHHHHHHHHhc
Confidence 222233 4999999998742 357899999988753 7899999999999999999 56678888888
Q ss_pred C----------cEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHH
Q 011570 232 N----------IHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCA 301 (483)
Q Consensus 232 ~----------~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~ 301 (483)
+ ++||+||+|+.. . .. .++..+ ...+++.|+||.+| .|+||++++++.....+
T Consensus 205 ~~~~~~~~~~~~~livDea~~~~---~-~~-~~~~~~---------~~d~~~~s~~K~~g---~~~G~~~~~~~~~~~~~ 267 (432)
T 3a9z_A 205 NQIRAASGLPRVLVHTDAAQALG---K-RR-VDVEDL---------GVDFLTIVGHKFYG---PRIGALYVRGVGKLTPL 267 (432)
T ss_dssp HHHHHHHTCCCCEEEEECTTTTT---T-SC-CCHHHH---------CCSEEEEEGGGTTC---CSCEEEEETTBTTTBCC
T ss_pred CcccccccCCceEEEEEchhhhC---C-cc-cChhhc---------CCCEEEEehhHhcC---CcceEEEEccccccCCc
Confidence 8 999999999742 2 11 233333 12245789999875 46999999654311111
Q ss_pred H---------HhhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceee--cC-----CceE
Q 011570 302 R---------KMSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCL--KS-----NAGL 364 (483)
Q Consensus 302 ~---------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~--~~-----~~g~ 364 (483)
. .....+..+.+.+.++.+++.. +++++++.+++++++++++.+.|+++ |+.+. .+ ..+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~ 344 (432)
T 3a9z_A 268 YPMLFGGGQERNFRPGTENTPMIAGLGKAADL---VSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPN 344 (432)
T ss_dssp CCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTT
T ss_pred CceeecCCccccccCCCcCHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCC
Confidence 1 0111244667777666666542 23456777888899999999999875 65443 22 1223
Q ss_pred EEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC------------------CCCEEEEEecc-CCHHHHHH
Q 011570 365 FLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP------------------NPGWFRVCFAN-MDDRTMEI 425 (483)
Q Consensus 365 f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~------------------~~~~iRis~~~-~~~e~l~~ 425 (483)
.+++.++... .. ..++...+ .+|.+.+|..|... ..+++||+++. .+++++++
T Consensus 345 ~~~~~~~~~~-~~----~~~~~~~l---~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~ 416 (432)
T 3a9z_A 345 TCNFSIQGSQ-LR----GYMVLAQC---QTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDL 416 (432)
T ss_dssp EEEEEECSTT-CC----HHHHHHHC---SSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHH
T ss_pred EEEEEeCCCC-Cc----HHHHHHHh---cCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHH
Confidence 4555555310 00 11333332 38888887655321 13789999986 38999999
Q ss_pred HHHHHHHHHHHh
Q 011570 426 ALSRITSFMLKN 437 (483)
Q Consensus 426 ~l~~L~~~l~~~ 437 (483)
++++|++++++.
T Consensus 417 ~~~~l~~~~~~~ 428 (432)
T 3a9z_A 417 IVQDLKQAVNQL 428 (432)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999998765
No 133
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.96 E-value=3.4e-29 Score=253.23 Aligned_cols=285 Identities=16% Similarity=0.118 Sum_probs=198.2
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcC-hHHHHhhhcCcE-----
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPG-FDRDLRWRTGVQ----- 167 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~-~~~~~~~~~G~~----- 167 (483)
..++++.++++++ +++++|++|+|+++++..++.++. .+||.|++.+|+|+. +...+... |.+
T Consensus 89 ~~~l~~~la~~~~--------~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~-g~~~~~~~ 159 (395)
T 1vef_A 89 RGEFYRTLTAILP--------PELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVT-WEPKYREP 159 (395)
T ss_dssp HHHHHHHHHHTSC--------TTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTC-CCHHHHGG
T ss_pred HHHHHHHHHHhcC--------CCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhc-CCcccccc
Confidence 4566666666543 467899999999999999998764 578999999999965 44445443 654
Q ss_pred -------EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHhhcCcEEEEcc
Q 011570 168 -------LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFINEKNIHLVCDE 239 (483)
Q Consensus 168 -------~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~De 239 (483)
+..++. .|+++|++++++ ++++|+++.++||||.++ +.+++++|+++|++||++||+||
T Consensus 160 ~~p~~~~~~~~~~-------~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~De 226 (395)
T 1vef_A 160 FLPLVEPVEFIPY-------NDVEALKRAVDE------ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDE 226 (395)
T ss_dssp GCSCSSCEEEECT-------TCHHHHHHHCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred cCCCCCCeeEeCC-------CcHHHHHHHhcc------CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 222221 488999988753 678777655588999865 78889999999999999999999
Q ss_pred ccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH--hhhcCCCChHHHHH
Q 011570 240 IYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK--MSSFGLVSSQTQHL 317 (483)
Q Consensus 240 ay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~--~~~~~~~s~~~q~~ 317 (483)
+|.++.+.+ .. .++. ... ....++ ||||.++ +|+|+||++++ +.+.+.+.. ....+..+++++.+
T Consensus 227 a~~~~~~~g-~~-~~~~-~~~-----~~~d~~---s~sK~~~-~g~~~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a 293 (395)
T 1vef_A 227 IQTGMGRTG-KR-FAFE-HFG-----IVPDIL---TLAKALG-GGVPLGVAVMR-EEVARSMPKGGHGTTFGGNPLAMAA 293 (395)
T ss_dssp TTTTTTTTS-SS-STHH-HHT-----CCCSEE---EECGGGG-TTSSCEEEEEE-HHHHHTSCTTSSCCSSTTCHHHHHH
T ss_pred cccCCccCC-ch-hHhh-hcC-----CCCCEE---EEccccc-CCCceEEEEeh-HHHHhhhccCCcCCCcCCCHHHHHH
Confidence 998643333 22 1222 211 112332 8899999 59999999995 445544332 11123467777777
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcee--ecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCe
Q 011570 318 IATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGC--LKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKL 395 (483)
Q Consensus 318 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~--~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV 395 (483)
+.++++.. .+ ....++++++++++.+.|.+++.++ ..+..|+|+|++++.. ..++.+.|++++||
T Consensus 294 ~~~al~~~---~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~l~~~l~~~~gi 360 (395)
T 1vef_A 294 GVAAIRYL---ER--TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKEK--------AAPYIARLEKEHRV 360 (395)
T ss_dssp HHHHHHHH---HH--HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESSC--------SHHHHHHHHHHHCE
T ss_pred HHHHHHHH---Hh--CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcCh--------HHHHHHHHHHHCCe
Confidence 76666432 11 2345677788888888888775321 1233457899988741 12677778745699
Q ss_pred EeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 396 NVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 396 ~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
.+.|+ +++++||+++. .+++++++++++|++++
T Consensus 361 ~v~~~------~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 361 LALQA------GPTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp ECEES------STTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEecC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 99986 25789999864 59999999999998875
No 134
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.96 E-value=3.2e-28 Score=245.46 Aligned_cols=298 Identities=16% Similarity=0.190 Sum_probs=215.0
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcE
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQ 167 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~ 167 (483)
.|.+..+..++|+++|++++ . .++|++|+| ++++..++.++ +++||+|+++.|+|+.+...+... |++
T Consensus 33 ~~~~~~~~~~l~~~la~~~~--------~-~~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~~~~-g~~ 101 (388)
T 1b9h_A 33 WRMGGDEVNSFEREFAAHHG--------A-AHALAVTNG-THALELALQVMGVGPGTEVIVPAFTFISSSQAAQRL-GAV 101 (388)
T ss_dssp BTTTCSHHHHHHHHHHHHTT--------C-SEEEEESCH-HHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHT-TCE
T ss_pred eecCCHHHHHHHHHHHHHhC--------C-CeEEEeCCH-HHHHHHHHHHcCCCCcCEEEECCCccHHHHHHHHHc-CCE
Confidence 35555678999999999986 1 357777777 89999999999 899999999999999999988876 999
Q ss_pred EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC-cc
Q 011570 168 LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT-VF 246 (483)
Q Consensus 168 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~-~~ 246 (483)
++.++++++ +|.+|++.|++++++ ++++|+ |+||||.+.+ +++|.++|+++|++||+||+|+.. .+
T Consensus 102 ~~~v~~~~~-~~~~d~~~l~~~i~~------~~~~v~---~~n~tG~~~~---l~~i~~la~~~~~~li~D~a~~~g~~~ 168 (388)
T 1b9h_A 102 TVPVDVDAA-TYNLDPEAVAAAVTP------RTKVIM---PVHMAGLMAD---MDALAKISADTGVPLLQDAAHAHGARW 168 (388)
T ss_dssp EEEECBCTT-TCCBCHHHHHHHCCT------TEEEEC---CBCGGGCCCC---HHHHHHHHHHHTCCBCEECTTCTTCEE
T ss_pred EEEEecCCC-cCCCCHHHHHHhcCc------CceEEE---EeCCccCcCC---HHHHHHHHHHcCCEEEEecchhcCCcc
Confidence 999998753 578999999998853 677666 9999999987 788888899999999999999853 22
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHH--HHHHHHhhhc--------------CC-
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQV--VSCARKMSSF--------------GL- 309 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l--~~~~~~~~~~--------------~~- 309 (483)
.+ .++.. .+ ++++.||||..+++|.|+||++++++.+ .+.+...... +.
T Consensus 169 ~~----~~~~~---------~~-~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 234 (388)
T 1b9h_A 169 QG----KRVGE---------LD-SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSN 234 (388)
T ss_dssp TT----EEGGG---------SS-SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCB
T ss_pred CC----eeccc---------cc-ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeeccccc
Confidence 22 12111 12 4678899977777788999999966545 4444332221 11
Q ss_pred --CChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceeec------CCceEEEeeecCchhhccChH
Q 011570 310 --VSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLK------SNAGLFLWMDLHHLLKEQTYE 380 (483)
Q Consensus 310 --~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~------~~~g~f~~~~l~~~~~~~~~~ 380 (483)
.+.+...++...+ +++++..++++++++++.+.|.++ |+.+.. +.+++++|++++.... .
T Consensus 235 ~~~~~~~~a~~~~~~-------~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 303 (388)
T 1b9h_A 235 MRLNEFSASVLRAQL-------ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTE----E 303 (388)
T ss_dssp CBCBHHHHHHHHHHH-------TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCH----H
T ss_pred CCcCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCc----c
Confidence 2222222221211 224555667778889999999887 787764 3567899999975210 1
Q ss_pred HHHHHHHHHHHhcCeEeeCCCCCCC----------CC-----------------CCEEEEEecc-C-CHHHHHHHHHHHH
Q 011570 381 AEMALWRVIINEVKLNVSPGSSFHC----------PN-----------------PGWFRVCFAN-M-DDRTMEIALSRIT 431 (483)
Q Consensus 381 ~~~~~~~~Ll~~~gV~v~pg~~f~~----------~~-----------------~~~iRis~~~-~-~~e~l~~~l~~L~ 431 (483)
+..++.+.|.+ +||.++++..... .. .+.+||++.. . ++++++.+++.|+
T Consensus 304 ~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~ 382 (388)
T 1b9h_A 304 RRNALVDRLVE-AGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIA 382 (388)
T ss_dssp HHHHHHHHHHH-TTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHH-CCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHH
Confidence 23367777775 6999988743110 00 1359999965 6 8999999999999
Q ss_pred HHHHH
Q 011570 432 SFMLK 436 (483)
Q Consensus 432 ~~l~~ 436 (483)
+++++
T Consensus 383 ~~~~~ 387 (388)
T 1b9h_A 383 DAVAR 387 (388)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 88764
No 135
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.96 E-value=1.6e-28 Score=244.71 Aligned_cols=288 Identities=9% Similarity=0.065 Sum_probs=207.1
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC-hHHHHhhhcCcEEEEeecCC
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPG-FDRDLRWRTGVQLVPVVCDS 175 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~-~~~~~~~~~G~~~~~v~~~~ 175 (483)
.++.+.+.+++.+.+| . .++++|++|+|+++++..++.++.++ +.+++..|.|.. +...++.. |++++.++.+.
T Consensus 42 ~~~~~~~~~~la~~~g--~-~~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~~~~~~~~~~~~~~~~-g~~~~~v~~~~ 116 (362)
T 3ffr_A 42 EEVYKTASDNLKTLLE--L-PSNYEVLFLASATEIWERIIQNCVEK-KSFHCVNGSFSKRFYEFAGEL-GREAYKEEAAF 116 (362)
T ss_dssp HHHHHHHHHHHHHHTT--C-CTTEEEEEESCHHHHHHHHHHHHCSS-EEEEEECSHHHHHHHHHHHHT-TCEEEEEECCT
T ss_pred HHHHHHHHHHHHHHhC--C-CCCcEEEEeCCchHHHHHHHHhccCC-cEEEEcCcHHHHHHHHHHHHh-CCCeEEEecCC
Confidence 3555555555555544 2 14678999999999999999999988 556666666763 23345554 99999999864
Q ss_pred CCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc-CcEEEEccccccCccCCCCCcch
Q 011570 176 SNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK-NIHLVCDEIYAATVFTKESSFVS 254 (483)
Q Consensus 176 ~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~-~~~iI~Deay~~~~~~~~~~~~s 254 (483)
++.+|+++|+ + ++++++|++++|+||||.+++ +++|.++|++| |+++|+|++|... . .+ ..
T Consensus 117 --~~~~d~~~l~--~------~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~p~~~li~D~a~~~~---~-~~-~~ 178 (362)
T 3ffr_A 117 --GKGFYPADIT--V------PADAEIICLTHNETSSGVSMP---VEDINTFRDKNKDALIFVDAVSSLP---Y-PK-FD 178 (362)
T ss_dssp --TCCCCGGGCC--C------CTTCCEEEEESEETTTTEECC---HHHHTTSGGGSTTSEEEEECTTTTT---S-SC-CC
T ss_pred --CCCCCHHHHh--c------cCCccEEEEEcCCCCcceeCC---HHHHHHHHHhCCCCEEEEecccccC---C-cc-cC
Confidence 5678999988 3 248999999999999999999 77788999999 9999999999742 1 11 11
Q ss_pred HHHhhhhccccCCCeEEEEecCccccC-CCCceEEEEEecChHHHHHHHHhhh-----------------------cCCC
Q 011570 255 IAEIIDQDIACNRNLIHIVYSLSKDMG-FPGFRVGIIYSYNDQVVSCARKMSS-----------------------FGLV 310 (483)
Q Consensus 255 ~~~l~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~li~~~~~l~~~~~~~~~-----------------------~~~~ 310 (483)
+ . ...+++.|+||.++ ++|+ |+++++ +.+.+.+..... .+..
T Consensus 179 ---~-------~-~~d~~~~s~~K~~~~~~G~--g~~~~~-~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (362)
T 3ffr_A 179 ---W-------T-KIDSVFFSVQKCFGLPAGL--GVWILN-DRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETP 244 (362)
T ss_dssp ---T-------T-SCSEEEEETTSTTCCCSCC--EEEEEE-HHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCC
T ss_pred ---h-------h-HCcEEEEecccccCCCCce--EEEEEC-HHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCc
Confidence 1 0 13477899999998 7884 677774 445444443322 3445
Q ss_pred ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecC----CceEEEeeecCchhhccChHHHHHH
Q 011570 311 SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKS----NAGLFLWMDLHHLLKEQTYEAEMAL 385 (483)
Q Consensus 311 s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~----~~g~f~~~~l~~~~~~~~~~~~~~~ 385 (483)
+...+.++..++.... ...+++.+++++++++++.+.|+++ |+++..+ .++.++|+.++. + ..++
T Consensus 245 ~~~~~~~~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~--~------~~~~ 314 (362)
T 3ffr_A 245 NAMNIFLLGKVTGDML--QISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM--L------PGEI 314 (362)
T ss_dssp CHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS--C------HHHH
T ss_pred hHHHHHHHHHHHHHHH--HccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC--C------HHHH
Confidence 6666666655554211 1124667778888999999999998 8887652 245678888875 1 2367
Q ss_pred HHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 386 WRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 386 ~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
.+.|.++ ||.+++|..+ ..++++||+++. .+++++++++++|++++
T Consensus 315 ~~~l~~~-gi~~~~g~~~--~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 315 NKILEPF-DMAVGAGYGS--KKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp HHHHGGG-TEEEEECSGG--GTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHC-CeEEecCccc--cCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 7777765 9999998544 346799999975 58999999999998764
No 136
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.96 E-value=7.3e-28 Score=248.98 Aligned_cols=321 Identities=15% Similarity=0.221 Sum_probs=218.9
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC----CCCe---EEEeCCCCcChHHHHh
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD----PGDA---FLVPTPYYPGFDRDLR 161 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~----~gd~---Vlv~~P~y~~~~~~~~ 161 (483)
.|++..+..+|+++++++++ .++|++|+|+++++..++.++++ +||. |+++.+.|..+...+.
T Consensus 71 ~y~~~~~~~~l~~~la~~~~----------~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~ 140 (467)
T 1ax4_A 71 AYAGSRNYYDLKDKAKELFN----------YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVE 140 (467)
T ss_dssp CSSSCHHHHHHHHHHHHHHC----------CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHH
T ss_pred ccccCccHHHHHHHHHHHcC----------CCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhhHHHh
Confidence 57766788999999999985 26999999999999999999988 9998 9999777777777777
Q ss_pred hhcCcEEEEeecCC----C----CCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCC-cCCCCHHHHHHHHHHHhhcC
Q 011570 162 WRTGVQLVPVVCDS----S----NDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPL-GTFLDRETLKDIVSFINEKN 232 (483)
Q Consensus 162 ~~~G~~~~~v~~~~----~----~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPt-G~~~~~~~l~~i~~~a~~~~ 232 (483)
.. |.+++.++.+. . .++.+|+++|++++++.. ..++++|++++||||| |.+++.+++++|+++|++||
T Consensus 141 ~~-g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~--~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~g 217 (467)
T 1ax4_A 141 LN-GCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG--ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHG 217 (467)
T ss_dssp HT-TCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC--GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHT
T ss_pred cc-CCceecccccccccccccCCcccccCHHHHHHHHHhcC--CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcC
Confidence 65 99988776532 1 134689999999997531 1268999999999999 89999999999999999999
Q ss_pred cEEEEcccccc--C--------ccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC-CceEEEEEecCh-HHHHH
Q 011570 233 IHLVCDEIYAA--T--------VFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP-GFRVGIIYSYND-QVVSC 300 (483)
Q Consensus 233 ~~iI~Deay~~--~--------~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~-GlRiG~li~~~~-~l~~~ 300 (483)
++||+||++.. . .+.+ .++.++..++. ...+ +++.|+||.+|++ | ||++++++ .+.+.
T Consensus 218 i~li~De~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~d--~~~~s~sK~~g~~~G---g~~~~~d~~~l~~~ 287 (467)
T 1ax4_A 218 IFVVMDSARFCENAYFIKARDPKYKN----ATIKEVIFDMY-KYAD--ALTMSAKKDPLLNIG---GLVAIRDNEEIFTL 287 (467)
T ss_dssp CCEEEECTTHHHHHHHHHHHCGGGTT----CCHHHHHHHHG-GGCS--EEEEETTSTTCCSSC---EEEEESSCHHHHHH
T ss_pred CEEEEEchhhhhcchhccccccccCC----Cchhhhhhhhc-cccc--eEEEeccccCCCCcc---eEEEeCCHHHHHHH
Confidence 99999998642 0 1222 23333321000 0123 4568999999876 5 78877635 55554
Q ss_pred HHHhhh-------cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCch
Q 011570 301 ARKMSS-------FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHL 373 (483)
Q Consensus 301 ~~~~~~-------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~ 373 (483)
+..... ++..+.....+++..+..... .+.++ ...++++++.+.|.+.|+++..+.+|+++|+++...
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~----~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 362 (467)
T 1ax4_A 288 ARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE-EEYLH----YRIGQVKYLGDRLREAGIPIQYPTGGHAVFVDCKKL 362 (467)
T ss_dssp HHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC-HHHHH----HHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEESTTT
T ss_pred HHhhccccccccccCCccchHHHHHHHHHHHhhh-hhHHH----HHHHHHHHHHHHHHhCCCCcccCCCceEEEEehhhh
Confidence 433221 122233333322222221000 01122 223556778888877788887788899999993221
Q ss_pred ---hhccChHHHHHHHHHHHHhcCeEeeC-CCCC-CC---------CCCCEEEEEec-c-CCHHHHHHHHHHHHHHHHHh
Q 011570 374 ---LKEQTYEAEMALWRVIINEVKLNVSP-GSSF-HC---------PNPGWFRVCFA-N-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 374 ---~~~~~~~~~~~~~~~Ll~~~gV~v~p-g~~f-~~---------~~~~~iRis~~-~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
...... ...+++..|++++||.+.| |+.| +. ...+++||+++ . .+++++++++++|++++++.
T Consensus 363 ~~~~~~~~~-~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~ 441 (467)
T 1ax4_A 363 VPQIPGDQF-PAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKF 441 (467)
T ss_dssp CTTSCGGGC-HHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred ccccccCCC-CHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence 000011 2347888886677999999 6532 11 01378999997 3 58999999999999998875
Q ss_pred h
Q 011570 438 V 438 (483)
Q Consensus 438 ~ 438 (483)
+
T Consensus 442 ~ 442 (467)
T 1ax4_A 442 A 442 (467)
T ss_dssp T
T ss_pred h
Confidence 4
No 137
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.96 E-value=1.3e-28 Score=252.65 Aligned_cols=349 Identities=14% Similarity=0.063 Sum_probs=216.8
Q ss_pred CCCcccccchhh--hh--cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC-
Q 011570 45 PNGVIQMGLAEN--LL--CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP- 119 (483)
Q Consensus 45 ~~~~i~l~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~- 119 (483)
...++|++.+.+ ++ .++.+.+++.+. +.....|+...|..++++++++++.+.++ ...
T Consensus 42 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~la~~~~----~~~~ 104 (439)
T 3dxv_A 42 GRELIDLSGAWGAASLGYGHPAIVAAVSAA-------------AANPAGATILSASNAPAVTLAERLLASFP----GEGT 104 (439)
T ss_dssp SCEEEESSTTTTTCTTCBSCHHHHHHHHHH-------------HHSCSCSCSSSSEEHHHHHHHHHHHHTTT----CTTT
T ss_pred CCEEEECCCchhhccCCCCCHHHHHHHHHH-------------HHhccCccccccCCHHHHHHHHHHHHhCC----CCCC
Confidence 456788887765 23 234444544331 11123354445677888888888887654 344
Q ss_pred CcEEEeCChhHHHHHHHHHh--cCCCCeEEEeCCCCcChHHHHhhhcCcEE--------------EEeecCCCCCccc--
Q 011570 120 DRIVMSGGATGAHETVAFCL--ADPGDAFLVPTPYYPGFDRDLRWRTGVQL--------------VPVVCDSSNDFKV-- 181 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l--~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~--------------~~v~~~~~~~~~~-- 181 (483)
++|++|+|+++++..++.++ ..+++.|++.+|+|+++........|... ..++.+. .+..
T Consensus 105 ~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 182 (439)
T 3dxv_A 105 HKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRP--YRNDPT 182 (439)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSC--BTTBTT
T ss_pred CEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCc--cccccc
Confidence 79999999999999999875 33667899999998665544433323221 2223221 1111
Q ss_pred ---CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCC-HHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHH
Q 011570 182 ---TMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLD-RETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAE 257 (483)
Q Consensus 182 ---d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~-~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~ 257 (483)
|+++|++++++ ....++++|++++++|++|.+.+ .+.+++|.++|++||+++|+||+|.++...+ .. ... .
T Consensus 183 ~~~d~~~le~~l~~--~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g-~~-~~~-~ 257 (439)
T 3dxv_A 183 GDAILTLLTEKLAA--VPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSG-RL-HCF-E 257 (439)
T ss_dssp SHHHHHHHHHHHHT--SCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTS-SS-SGG-G
T ss_pred HHHHHHHHHHHHHh--cCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc-hh-hHH-H
Confidence 68999998841 11236777777777888888664 5559999999999999999999998743333 21 121 1
Q ss_pred hhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh--hhcCCCChHHHHHHHHhcCChhHHHHHHHHH
Q 011570 258 IIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM--SSFGLVSSQTQHLIATMLSDDQFVEKFIAES 335 (483)
Q Consensus 258 l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 335 (483)
... ...+++ ||||++| +|+|+||+++ ++.+.+.+... ...+ .+++++.++.+++..... +..
T Consensus 258 ~~~-----~~~di~---s~sK~~~-~G~riG~~~~-~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~-----~~~ 321 (439)
T 3dxv_A 258 HEG-----FVPDIL---VLGKGLG-GGLPLSAVIA-PAEILDCASAFAMQTLH-GNPISAAAGLAVLETIDR-----DDL 321 (439)
T ss_dssp GTT-----CCCSEE---EECGGGG-TTSCCEEEEE-EHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH-----TTH
T ss_pred hcC-----CCCCEE---EEcchhc-CCcceEEEEE-CHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh-----cCH
Confidence 111 112222 9999999 7999999999 45555544332 1224 678888877776653211 112
Q ss_pred HHHHHHHHHHHHHhhh----cCC-ceeecCCceEEEeeecCchhh--ccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCC
Q 011570 336 AKRIAERHKAFTWGLS----QVG-IGCLKSNAGLFLWMDLHHLLK--EQTYEAEMALWRVIINEVKLNVSPGSSFHCPNP 408 (483)
Q Consensus 336 ~~~l~~~~~~l~~~L~----~~g-i~~~~~~~g~f~~~~l~~~~~--~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~ 408 (483)
.++++++++++.+.|. ..+ +...++. |.|+|+++..... ........++++.++++ ||.+.|+..+ .
T Consensus 322 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~----~ 395 (439)
T 3dxv_A 322 PAMAERKGRLLRDGLSELAKRHPLIGDIRGR-GLACGMELVCDRQSREPARAETAKLIYRAYQL-GLVVYYVGMN----G 395 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEEEEEETTTTEECHHHHHHHHHHHHHH-TEECEEESTT----S
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCccccCCCHHHHHHHHHHHHHC-CcEEeecCCC----C
Confidence 2233333344444333 333 3444444 4588887732100 00112234677788765 9999998532 4
Q ss_pred CEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 409 GWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 409 ~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
+++||+++. .+++++++++++|++++++..+
T Consensus 396 ~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 427 (439)
T 3dxv_A 396 NVLEFTPPLTITETDIHKALDLLDRAFSELSA 427 (439)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHHHHHHHTGGG
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 789999765 4999999999999999987643
No 138
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.96 E-value=1.2e-27 Score=243.37 Aligned_cols=346 Identities=12% Similarity=0.045 Sum_probs=219.4
Q ss_pred CcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeC
Q 011570 47 GVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSG 126 (483)
Q Consensus 47 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~ 126 (483)
+.++|..++|++++ .+.+++.+.... .....+.....|+......++++.+.+.+.+.+| +++++|++|+
T Consensus 26 ~~i~l~~~~~~~~~-~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g----~~~~~i~~~s 95 (417)
T 3n0l_A 26 EGLEMIASENFTLP-EVMEVMGSILTN-----KYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN----CKFANVQPNS 95 (417)
T ss_dssp HSEECCTTCCCCCH-HHHHHHTBGGGG-----CCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT----CSEEECCCSS
T ss_pred cCeeeecccCCCCH-HHHHHHhhhhhc-----cccccCCCccccccchHHHHHHHHHHHHHHHHhC----CCCcceEecc
Confidence 35788888887644 444544432100 0000011112233333345666655555555555 4667898888
Q ss_pred ChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH---HHhhh-cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 011570 127 GATGAHETVAFCLADPGDAFLVPTPYYPGFDR---DLRWR-TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG 202 (483)
Q Consensus 127 G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---~~~~~-~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 202 (483)
| ++++..++.+++++||+|+++.|+|..+.. .+... .+..+++++.+ .++.+|+++|++++.+. ++++
T Consensus 96 G-t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~-----~~~~ 167 (417)
T 3n0l_A 96 G-SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKE-----KPKL 167 (417)
T ss_dssp H-HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHH-----CCSE
T ss_pred H-HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhc-----CCeE
Confidence 8 799999999999999999999999987644 22222 24556666665 46789999999999742 7889
Q ss_pred EEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccc-cCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccC
Q 011570 203 VLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYA-ATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMG 281 (483)
Q Consensus 203 i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~-~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g 281 (483)
|++++|+| |.+++ +++|.++|++||++||+||+|. +..+.+ .....+ ....+++.|+||.+
T Consensus 168 v~~~~~~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~-~~~~~~-----------~~~di~~~s~sK~l- 229 (417)
T 3n0l_A 168 IVCGASAY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAG-EHPSPF-----------PYAHVVSSTTHKTL- 229 (417)
T ss_dssp EEECCSSC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTT-SSCCCT-----------TTCSEEEEESSTTT-
T ss_pred EEECCccc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcc-cCCCcc-----------ccceEEEeeCcccc-
Confidence 99888887 88888 8889999999999999999963 322332 211111 12347889999987
Q ss_pred CCCceEEEEEecChHHHHHHHHhhhcC---CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceee
Q 011570 282 FPGFRVGIIYSYNDQVVSCARKMSSFG---LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCL 358 (483)
Q Consensus 282 ~~GlRiG~li~~~~~l~~~~~~~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~ 358 (483)
+|+|.||++++++.+.+.+......+ ..+...+.++...+.. .....+++.++++.++++++.+.|.+.|+++.
T Consensus 230 -~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 306 (417)
T 3n0l_A 230 -RGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKF--NLSDEWKVYAKQVRTNAQVLANVLMDRKFKLV 306 (417)
T ss_dssp -CSCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHH--HTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEG
T ss_pred -CCCCeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHHHHHHHHHHhCCceec
Confidence 78899999996567777665543332 2233343343333321 11223466677788888999999988888776
Q ss_pred c-CCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC----CCCEEEEEecc-----CCHHHHHHHHH
Q 011570 359 K-SNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP----NPGWFRVCFAN-----MDDRTMEIALS 428 (483)
Q Consensus 359 ~-~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~----~~~~iRis~~~-----~~~e~l~~~l~ 428 (483)
. +..+.++|++++.... .. .....+++++||.+.++..+... .++.+|+++.. .++++++++++
T Consensus 307 ~~~~~~~~~~~~~~~~~~-----~~-~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~ 380 (417)
T 3n0l_A 307 SDGTDNHLVLMSFLDREF-----SG-KDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSN 380 (417)
T ss_dssp GGSCSSSEEEEECTTSSS-----CH-HHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHH
T ss_pred cCCCCceEEEEEcccCCC-----CH-HHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHH
Confidence 5 2345688888863210 11 23344556789999876543321 23569999853 35799999999
Q ss_pred HHHHHHHHh
Q 011570 429 RITSFMLKN 437 (483)
Q Consensus 429 ~L~~~l~~~ 437 (483)
+|++++++.
T Consensus 381 ~l~~~l~~~ 389 (417)
T 3n0l_A 381 YIADILDDV 389 (417)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhcc
Confidence 999999765
No 139
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.96 E-value=6.5e-28 Score=248.47 Aligned_cols=353 Identities=10% Similarity=0.039 Sum_probs=220.0
Q ss_pred CCCcccccchh--hhhc--HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 45 PNGVIQMGLAE--NLLC--HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 45 ~~~~i~l~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
...+||++.+. +.++ ++.+.+++.+... .. .+....+..++++++++++.+.++ .+.+
T Consensus 48 g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~-------------~~-~~~~~~~~~~~~~~la~~l~~~~~----~~~~ 109 (452)
T 3n5m_A 48 GKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQ-------------TL-SYFPMSQSHEPAIKLAEKLNEWLG----GEYV 109 (452)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHT-------------TC-CCCCTTSEEHHHHHHHHHHHHHHT----SCEE
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHHHHH-------------hc-CCcccccCCHHHHHHHHHHHHhCC----CCce
Confidence 45678998873 4443 3555555543111 11 111223456677777777776654 3344
Q ss_pred cEEEeCChhHHHHHHHHHhc-----C---CCCeEEEeCCCCcChHHHHhhhcCc------------EEEEeecCCCCCcc
Q 011570 121 RIVMSGGATGAHETVAFCLA-----D---PGDAFLVPTPYYPGFDRDLRWRTGV------------QLVPVVCDSSNDFK 180 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~-----~---~gd~Vlv~~P~y~~~~~~~~~~~G~------------~~~~v~~~~~~~~~ 180 (483)
|++|+|+++++..++.++. . ++|.|++.+|+|+++........|. .+..++......+.
T Consensus 110 -v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (452)
T 3n5m_A 110 -IFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMP 188 (452)
T ss_dssp -EEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTST
T ss_pred -EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCc
Confidence 9999999999999998887 5 7899999999998776544433121 13333321111111
Q ss_pred c-C---------HHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccccccCccCC
Q 011570 181 V-T---------MEALEAAYEKAQESNIRIKGVLITNP-SNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYAATVFTK 248 (483)
Q Consensus 181 ~-d---------~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~ 248 (483)
. | +++|++++++. ...++++|+++.+ +| ||.++ +.+++++|.++|++||+++|+||+|.++.+.+
T Consensus 189 ~~~~~~~~~~~~~~~le~~l~~~--~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g 265 (452)
T 3n5m_A 189 GIERENIYDVECVKEVDRVMTWE--LSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTG 265 (452)
T ss_dssp TTTTSCGGGCHHHHHHHHHHHHH--CGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred cCCchhhHHHHHHHHHHHHHHhc--CCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCccc
Confidence 1 1 88999988721 1136777777777 89 99766 88889999999999999999999998854444
Q ss_pred CCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHH---hh-----hcCCCChHHHHHHH
Q 011570 249 ESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARK---MS-----SFGLVSSQTQHLIA 319 (483)
Q Consensus 249 ~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~---~~-----~~~~~s~~~q~~~~ 319 (483)
.. ...... . .... +.||||+++ .| +|+||+++ ++.+.+.+.. .. ..+..+++++.++.
T Consensus 266 -~~-~~~~~~-~-----~~~d---i~t~sK~l~-~G~~~ig~~~~-~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~ 332 (452)
T 3n5m_A 266 -KA-FGFMNY-D-----VKPD---IITMAKGIT-SAYLPLSATAV-KREIYEAFKGKGEYEFFRHINTFGGNPAACALAL 332 (452)
T ss_dssp -SS-SGGGGT-T-----CCCS---EEEECGGGG-TTSSCCEEEEE-EHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHH
T ss_pred -cc-chhhhc-C-----CCCC---EEeeccccc-CCCcceEEEEE-CHHHHHHHhhccCCCCccccCCCCCCHHHHHHHH
Confidence 22 121111 1 1122 337999998 59 99999999 5666665522 11 22446788888887
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecCchhhcc-C--hHHHHHHHHHHHHhcCe
Q 011570 320 TMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLHHLLKEQ-T--YEAEMALWRVIINEVKL 395 (483)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~~~~~~~-~--~~~~~~~~~~Ll~~~gV 395 (483)
++|+.... ++..++.++.....++.+.+.+.++ .+....+.| .|+++++....... . .....+++..+++ +||
T Consensus 333 aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv 409 (452)
T 3n5m_A 333 KNLEIIEN-ENLIERSAQMGSLLLEQLKEEIGEHPLVGDIRGKG-LLVGIELVNDKETKEPIDNDKIASVVNACKE-KGL 409 (452)
T ss_dssp HHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESS-SCEEEEEEEETTTTEECCHHHHHHHHHHHHH-TTE
T ss_pred HHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEE-EEEEEEEecCCcccCCCCHHHHHHHHHHHHH-CCc
Confidence 77653211 1122333223333333344444444 344455555 57777774321110 0 0112356777775 599
Q ss_pred EeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHH
Q 011570 396 NVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFML 435 (483)
Q Consensus 396 ~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~ 435 (483)
.+.|+..|....++++||+++. .+++++++++++|+++++
T Consensus 410 ~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 450 (452)
T 3n5m_A 410 IIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAME 450 (452)
T ss_dssp ECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred EEeecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 9999987765567899998765 599999999999999875
No 140
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.96 E-value=5.7e-28 Score=244.29 Aligned_cols=331 Identities=12% Similarity=0.075 Sum_probs=214.2
Q ss_pred CCCcccccch--hhhhc--HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 45 PNGVIQMGLA--ENLLC--HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 45 ~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
...++|++.+ .++++ ++.+.+++.+... .. .|....+..++++++++++.+..+ ++
T Consensus 35 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~-------------~~-~~~~~~~~~~~~~~l~~~la~~~~------~~ 94 (395)
T 3nx3_A 35 AKKYLDFSSGIGVCALGYNHAKFNAKIKAQVD-------------KL-LHTSNLYYNENIAAAAKNLAKASA------LE 94 (395)
T ss_dssp CCEEEESSHHHHTCTTCBSCHHHHHHHHHHHT-------------TC-SCCCTTSBCHHHHHHHHHHHHHHT------CS
T ss_pred CCEEEECCCcHHhccCCCCCHHHHHHHHHHHH-------------hc-cccccccCCHHHHHHHHHHHHhcC------CC
Confidence 4567899988 45553 3555555443111 01 111112335666667776665543 58
Q ss_pred cEEEeCChhHHHHHHHHHhc-------CCCCeEEEeCCCCcChHHHHhhhc------------CcEEEEeecCCCCCccc
Q 011570 121 RIVMSGGATGAHETVAFCLA-------DPGDAFLVPTPYYPGFDRDLRWRT------------GVQLVPVVCDSSNDFKV 181 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~-------~~gd~Vlv~~P~y~~~~~~~~~~~------------G~~~~~v~~~~~~~~~~ 181 (483)
+|++|+|+++++..++.++. .++|.|++.+|+|+++........ +.++..++. .
T Consensus 95 ~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 167 (395)
T 3nx3_A 95 RVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------N 167 (395)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------T
T ss_pred eEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------C
Confidence 99999999999999998775 457999999999987654433221 134444442 2
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhh
Q 011570 182 TMEALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIID 260 (483)
Q Consensus 182 d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~ 260 (483)
|+++|++++++ ++++|++..++|++|.+ ++.+++++|.++|++||+++|+||+|.++...+ .. ......
T Consensus 168 d~~~l~~~l~~------~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g-~~-~~~~~~-- 237 (395)
T 3nx3_A 168 DISSVEKLVNE------KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSG-KF-FAYEHA-- 237 (395)
T ss_dssp CHHHHHTTCCT------TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS-SS-SGGGGG--
T ss_pred CHHHHHHhccC------CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCC-cc-hhHHhc--
Confidence 78899888753 67888887777777776 688889999999999999999999998754333 21 222111
Q ss_pred hccccCCCeEEEEecCccccCCCCceEEEEEecChHH-HHHHHHhh--hcCCCChHHHHHHHHhcCChhHHHHHHHHHHH
Q 011570 261 QDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQV-VSCARKMS--SFGLVSSQTQHLIATMLSDDQFVEKFIAESAK 337 (483)
Q Consensus 261 ~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l-~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~ 337 (483)
+....+.||||.++ +|+|+||++++ +.+ .+.+.... ..+..+++++.++.++++.... +++.++.++
T Consensus 238 -------~~~~d~~t~sK~~~-~G~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~-~~~~~~~~~ 307 (395)
T 3nx3_A 238 -------QILPDIMTSAKALG-CGLSVGAFVIN-QKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKE-EKILENVNK 307 (395)
T ss_dssp -------TCCCSEEEECGGGT-TTSCCEEEEEC-HHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHH-TTHHHHHHH
T ss_pred -------CCCCCEEEeccccc-CCCceEEEEEc-hhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHh-hHHHHHHHH
Confidence 11112348999998 69999999994 555 55543321 2244788888887777652110 122333333
Q ss_pred HHHHHHHHHHHhhhcCC-ceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEec
Q 011570 338 RIAERHKAFTWGLSQVG-IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFA 416 (483)
Q Consensus 338 ~l~~~~~~l~~~L~~~g-i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~ 416 (483)
.....++.+.+.+.+++ +...++. |+|+|++++.... ..++++.|++ +||.++|+. ++++||+++
T Consensus 308 ~~~~~~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~------~~~~~~~l~~-~Gi~v~~~~------~~~iRi~~~ 373 (395)
T 3nx3_A 308 LTPYLEQSLDELINEFDFCKKRKGL-GFMQGLSLDKSVK------VAKVIQKCQE-NALLLISCG------ENDLRFLPP 373 (395)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEEECTTSC------HHHHHHHHHH-TTEECEEET------TTEEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEeE-EEEEEEEeCCcch------HHHHHHHHHH-CCCEEecCC------CCEEEEECC
Confidence 33333344444444443 3334444 4688898875211 2367777765 599999863 578999976
Q ss_pred c-CCHHHHHHHHHHHHHHHHH
Q 011570 417 N-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 417 ~-~~~e~l~~~l~~L~~~l~~ 436 (483)
. .+++++++++++|++++++
T Consensus 374 ~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 374 LILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp TTCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHh
Confidence 5 4999999999999998863
No 141
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.96 E-value=8.3e-28 Score=246.16 Aligned_cols=310 Identities=13% Similarity=0.130 Sum_probs=199.4
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhh------------
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWR------------ 163 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~------------ 163 (483)
+++.++++.+.+.++ .++++|++|+|+++++..++.++. ..+|.|++.+|+|+++.......
T Consensus 85 ~~~~~l~~~la~~~~----~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 160 (433)
T 1zod_A 85 RPVVDLATRLANITP----PGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPA 160 (433)
T ss_dssp HHHHHHHHHHHHHSC----TTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCC
T ss_pred HHHHHHHHHHHHhCC----CCcCEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCC
Confidence 445555555554443 467899999999999999998653 23589999999997654432211
Q ss_pred -cCcEEEEeecCCCCCc--------ccCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcC-CCCHHHHHHHHHHHhhcC
Q 011570 164 -TGVQLVPVVCDSSNDF--------KVTMEALEAAYEKAQESNIRIKGVLITNP-SNPLGT-FLDRETLKDIVSFINEKN 232 (483)
Q Consensus 164 -~G~~~~~v~~~~~~~~--------~~d~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~-~~~~~~l~~i~~~a~~~~ 232 (483)
.|+..++++......| .+|++.|++++++. ...+++ +++++| +||||. +.+.+++++|.++|++||
T Consensus 161 ~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~-~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~ 237 (433)
T 1zod_A 161 AVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQ--SSGNLA-AFIAEPILSSGGIIELPDGYMAALKRKCEARG 237 (433)
T ss_dssp CTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHH--CCSCEE-EEEECSEETTTTCEECCTTHHHHHHHHHHHHT
T ss_pred CCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhc--CCCCeE-EEEEccccCCCCcccCCHHHHHHHHHHHHHhC
Confidence 1444444442211122 24689999988742 112455 455677 588996 678999999999999999
Q ss_pred cEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh----hcC
Q 011570 233 IHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS----SFG 308 (483)
Q Consensus 233 ~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~----~~~ 308 (483)
++||+||+|.++.+.+ .. ...... . .... +.||||.+| +|+|+||+++ ++.+.+.+.... ..+
T Consensus 238 ~~li~DEv~~~~g~~g-~~-~~~~~~-~-----~~~d---i~s~sK~~~-~G~~ig~~~~-~~~~~~~~~~~~~~~~~t~ 304 (433)
T 1zod_A 238 MLLILDEAQTGVGRTG-TM-FACQRD-G-----VTPD---ILTLSKTLG-AGLPLAAIVT-SAAIEERAHELGYLFYTTH 304 (433)
T ss_dssp CEEEEECTTTTTTTTS-SS-STHHHH-T-----CCCS---EEEECHHHH-TTSSCEEEEE-CHHHHHHHHHTTCCCCCTT
T ss_pred CEEEEeccccCCCcCc-hH-hHHhhc-C-----CCCC---EEEeccccc-CCCCeeEEEE-hHHHHHhhccCCCCCCCCC
Confidence 9999999999754433 21 222212 1 1122 238999999 5999999999 456666665421 223
Q ss_pred CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc----CC-ceeecCCceEEEeeecCchhhc--cChHH
Q 011570 309 LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ----VG-IGCLKSNAGLFLWMDLHHLLKE--QTYEA 381 (483)
Q Consensus 309 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~g-i~~~~~~~g~f~~~~l~~~~~~--~~~~~ 381 (483)
..+++++.++.++++... + ....++++++++++.+.|++ .+ +...++. |.|+|++++..... .....
T Consensus 305 ~~~~~~~~a~~aal~~~~---~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~ 378 (433)
T 1zod_A 305 VSDPLPAAVGLRVLDVVQ---R--DGLVARANVMGDRLRRGLLDLMERFDCIGDVRGR-GLLLGVEIVKDRRTKEPADGL 378 (433)
T ss_dssp TTCHHHHHHHHHHHHHHH---H--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEEEEEETTTTEECTTH
T ss_pred CcCHHHHHHHHHHHHHHH---h--CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCccccCCChHH
Confidence 467888887776664211 0 11223344444555554543 22 3334444 45888988642100 00012
Q ss_pred HHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 382 EMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 382 ~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
..++++.++ ++||.+.||..|+ .++++||+++. .+++++++++++|++++++
T Consensus 379 ~~~~~~~l~-~~Gv~v~~~~~~~--~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~ 431 (433)
T 1zod_A 379 GAKITRECM-NLGLSMNIVQLPG--MGGVFRIAPPLTVSEDEIDLGLSLLGQAIER 431 (433)
T ss_dssp HHHHHHHHH-HTTEECCEECCTT--SCCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HCCCeEeccCCCC--CCCEEEEECCcCCCHHHHHHHHHHHHHHHHH
Confidence 346778777 5699999998764 35799998764 5999999999999998865
No 142
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.96 E-value=9.8e-28 Score=245.37 Aligned_cols=295 Identities=13% Similarity=0.083 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc---C----CCCeEEEeCCCCcChHHHHhhhc-----
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA---D----PGDAFLVPTPYYPGFDRDLRWRT----- 164 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~---~----~gd~Vlv~~P~y~~~~~~~~~~~----- 164 (483)
.++++.++++++ +++++|++|+|+++++..++.++. + |||+|++.+|+|+++........
T Consensus 89 ~~l~~~la~~~~--------~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~ 160 (429)
T 1s0a_A 89 IELCRKLVAMTP--------QPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNS 160 (429)
T ss_dssp HHHHHHHHHHSC--------TTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTT
T ss_pred HHHHHHHHHhCC--------CCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchh
Confidence 556666666543 468999999999999999988653 2 68999999999987644332111
Q ss_pred ----------CcEEEEeecCC-CCCc-ccCHHHHHHHHHHHHhcCCceeEEEEeCC--CCCCcC-CCCHHHHHHHHHHHh
Q 011570 165 ----------GVQLVPVVCDS-SNDF-KVTMEALEAAYEKAQESNIRIKGVLITNP--SNPLGT-FLDRETLKDIVSFIN 229 (483)
Q Consensus 165 ----------G~~~~~v~~~~-~~~~-~~d~~~l~~~i~~~~~~~~~~~~i~l~~P--~NPtG~-~~~~~~l~~i~~~a~ 229 (483)
++..++++... ++.| .+|++.|++++++. ..++++ ++++| |||||. +.+.+++++|+++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~-vi~~p~~~n~tG~~~~~~~~l~~i~~l~~ 236 (429)
T 1s0a_A 161 MHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAH---RHEIAA-VIIEPIVQGAGGMRMYHPEWLKRIRKICD 236 (429)
T ss_dssp TGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHH---TTTEEE-EEECSSEECTTTCEEBCTHHHHHHHHHHH
T ss_pred hcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhC---CCCEEE-EEEeecccCCCCcccCCHHHHHHHHHHHH
Confidence 23444443211 1234 48999999998742 124554 55666 589996 557888999999999
Q ss_pred hcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh----
Q 011570 230 EKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM---- 304 (483)
Q Consensus 230 ~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~---- 304 (483)
+||+++|+||+|.++.+.+ .. .++... . ...++ .||||.++ +| +|+||+++ ++.+.+.+...
T Consensus 237 ~~~~~li~De~~~~~g~~g-~~-~~~~~~-~-----~~~d~---~t~sK~l~-~G~~~iG~~~~-~~~~~~~l~~~~~~~ 303 (429)
T 1s0a_A 237 REGILLIADEIATGFGRTG-KL-FACEHA-E-----IAPDI---LCLGKALT-GGTMTLSATLT-TREVAETISNGEAGC 303 (429)
T ss_dssp HHTCEEEEECTTTTTTTTS-SS-SGGGGG-T-----CCCSE---EEECGGGG-TSSSCCEEEEE-CHHHHHHHHTSTTSS
T ss_pred HcCCEEEEeehhhCCcccc-hH-HHhhhc-C-----CCCCE---EEeccccc-CCCccceEEEe-CHHHHHHhhcCCCcc
Confidence 9999999999998753333 21 122111 1 11233 27999998 79 99999999 45666655442
Q ss_pred --h-hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC----CceeecCCceEEEeeecCchhhcc
Q 011570 305 --S-SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV----GIGCLKSNAGLFLWMDLHHLLKEQ 377 (483)
Q Consensus 305 --~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----gi~~~~~~~g~f~~~~l~~~~~~~ 377 (483)
. ..+..+++++.++.++++.. .+ ....++++++++++.+.|.++ ++....+.| .|+|++++...+
T Consensus 304 ~~~~~t~~~n~~~~~a~~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g-~~~~~~~~~~~~-- 375 (429)
T 1s0a_A 304 FMHGPTFMGNPLACAAANASLAIL---ES--GDWQQQVADIEVQLREQLAPARDAEMVADVRVLG-AIGVVETTHPVN-- 375 (429)
T ss_dssp CSCCCTTTTCHHHHHHHHHHHHHH---HT--CHHHHHHHHHHHHHHHHHGGGGGCTTEEEEEEET-TEEEEEESSCBC--
T ss_pred cccCCCCCCCHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEee-EEEEEEECCccc--
Confidence 1 12346788888777776421 10 122344556667777777664 344444554 589998875211
Q ss_pred ChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 378 TYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 378 ~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
..++...|+ ++||.++|+ .+++||+++. .+++++++++++|++++++
T Consensus 376 ----~~~l~~~l~-~~Gi~v~~~-------~~~iRis~~~~~t~e~i~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 376 ----MAALQKFFV-EQGVWIRPF-------GKLIYLMPPYIILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp ----HHHHHHHHH-HTTEECCCB-------TTEEEECCCTTCCHHHHHHHHHHHHHHTSS
T ss_pred ----HHHHHHHHH-HCCCEEecc-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 236777777 569999873 2589999764 5999999999999988754
No 143
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=1.7e-27 Score=242.67 Aligned_cols=281 Identities=13% Similarity=0.093 Sum_probs=185.9
Q ss_pred EEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC---hHHHHhhhcCc--EEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 123 VMSGGATGAHETVAFCLADPGDAFLVPTPYYPG---FDRDLRWRTGV--QLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~---~~~~~~~~~G~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
++++|+++++..++.+++++||+|+++.|+|+. +....... |. ++++++.++ +++.+|++.|++++.+.
T Consensus 98 v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~---- 171 (425)
T 3ecd_A 98 VQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALS-GKWFNALQYGVSR-DTMLIDYDQVEALAQQH---- 171 (425)
T ss_dssp CCCSSHHHHHHHHHHHHCCTTCEEEEECC-------------------CEEEEECCCT-TTSSCCHHHHHHHHHHH----
T ss_pred eecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhc-ccceeeeecCCCc-ccCccCHHHHHHHHhhc----
Confidence 458888899999999999999999999999987 22222122 44 555666553 35789999999999742
Q ss_pred CceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC-ccCCCCCcchHHHhhhhccccCCCeEEEEecC
Q 011570 198 IRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT-VFTKESSFVSIAEIIDQDIACNRNLIHIVYSL 276 (483)
Q Consensus 198 ~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~-~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~ 276 (483)
++++|++++|+||+ ..+ +++|.++|++||++||+||+|... .+.+ .. .+... ...+++.|+
T Consensus 172 -~~~~v~~~~~~~~~--~~~---l~~i~~l~~~~~~~li~De~~~~g~~~~~-~~-~~~~~----------~~di~~~s~ 233 (425)
T 3ecd_A 172 -KPSLIIAGFSAYPR--KLD---FARFRAIADSVGAKLMVDMAHIAGVIAAG-RH-ANPVE----------HAHVVTSTT 233 (425)
T ss_dssp -CCSEEEEECSCCCS--CCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTT-SS-CCGGG----------TCSEEEEES
T ss_pred -CCcEEEEccccCCC--cCC---HHHHHHHHHHcCCEEEEECcChHhhhhcc-cc-cCchh----------cCcEEEecC
Confidence 68999999999974 344 789999999999999999995432 2332 22 22111 122778999
Q ss_pred ccccCCCCceEEEEEecChHHHHHHHHhhhcC---CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011570 277 SKDMGFPGFRVGIIYSYNDQVVSCARKMSSFG---LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV 353 (483)
Q Consensus 277 SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 353 (483)
||.+ +|+|+||++++++.+.+.+......+ ..+...+.++...+.. ...+++++.+++++++++++.+.|.+.
T Consensus 234 sK~l--~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (425)
T 3ecd_A 234 HKTL--RGPRGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGE--ALTDDFKTYIDRVLANAQALGDVLKAG 309 (425)
T ss_dssp SGGG--CCCSCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHH--HTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred Cccc--CCCCcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHhC
Confidence 9987 67899999997666766655433221 2333333333323211 112335666777888889999999988
Q ss_pred CceeecC-CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEee----CCCCCCCCCCCEEEEEecc-----CCHHHH
Q 011570 354 GIGCLKS-NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVS----PGSSFHCPNPGWFRVCFAN-----MDDRTM 423 (483)
Q Consensus 354 gi~~~~~-~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~----pg~~f~~~~~~~iRis~~~-----~~~e~l 423 (483)
|+++..+ .+++++|+.++.... .. +.....++++||.++ ||..+....++++|+++.. .+++++
T Consensus 310 g~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i 383 (425)
T 3ecd_A 310 GVDLVTGGTDNHLLLVDLRPKGL-----KG-AQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEF 383 (425)
T ss_dssp TCEEGGGSCSSSEEEEECGGGTC-----CH-HHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHH
T ss_pred CCeeccCCCCceEEEEEeCCCCC-----CH-HHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHH
Confidence 9888754 467789998864211 11 233444567799999 5433333335689999643 248999
Q ss_pred HHHHHHHHHHHHHh
Q 011570 424 EIALSRITSFMLKN 437 (483)
Q Consensus 424 ~~~l~~L~~~l~~~ 437 (483)
++++++|++++++.
T Consensus 384 ~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 384 REVGRLILEVFEAL 397 (425)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999999876
No 144
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.96 E-value=5.4e-28 Score=246.67 Aligned_cols=292 Identities=15% Similarity=0.111 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC-------CC-CeEEEeCCCCcChHHHHhhhcCcE-
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD-------PG-DAFLVPTPYYPGFDRDLRWRTGVQ- 167 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~P~y~~~~~~~~~~~G~~- 167 (483)
.++++++++.+.+..| +++|++|+|+++++..++.++.. +| +.|++++|+|+++...+....|.+
T Consensus 98 ~~~~~~l~~~la~~~g------~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~ 171 (420)
T 2pb2_A 98 NEPALRLGRKLIDATF------AERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPK 171 (420)
T ss_dssp CHHHHHHHHHHHHHSS------CSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHH
T ss_pred CHHHHHHHHHHHhhCC------CCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCcc
Confidence 4556666666655433 57999999999999999998865 67 599999999977644332222543
Q ss_pred -----------EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcC-CCCHHHHHHHHHHHhhcCcEE
Q 011570 168 -----------LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGT-FLDRETLKDIVSFINEKNIHL 235 (483)
Q Consensus 168 -----------~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~-~~~~~~l~~i~~~a~~~~~~i 235 (483)
+..++. .|+++|++++.+ ++++|++++|+|++|. +++.+++++|.++|++||+++
T Consensus 172 ~~~~~~p~~~~~~~~~~-------~d~~~le~~i~~------~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~l 238 (420)
T 2pb2_A 172 YSDGFGPKPADIIHVPF-------NDLHAVKAVMDD------HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALL 238 (420)
T ss_dssp HHTTSSSCCSCEEEECT-------TCHHHHHHHCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEE
T ss_pred ccccCCCCCCCeEEecC-------CCHHHHHHHhcc------CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEE
Confidence 444442 278999988753 7888888888888884 699999999999999999999
Q ss_pred EEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH--hhhcCCCChH
Q 011570 236 VCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK--MSSFGLVSSQ 313 (483)
Q Consensus 236 I~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~--~~~~~~~s~~ 313 (483)
|+||+|.++.+.+ .. .+.... . ...+++ ||||.+| +|+|+||++++ +.+.+.+.. ....+..+++
T Consensus 239 I~Dev~~g~~~~g-~~-~~~~~~-~-----~~~dii---t~sK~l~-~G~~iG~~~~~-~~l~~~l~~~~~~~t~~~~~~ 305 (420)
T 2pb2_A 239 VFDEVQCGMGRTG-DL-FAYMHY-G-----VTPDIL---TSAKALG-GGFPVSAMLTT-QEIASAFHVGSHGSTYGGNPL 305 (420)
T ss_dssp EEECTTTTTTTTS-SS-SHHHHH-T-----CCCSEE---EECGGGG-TTSCCEEEEEC-HHHHTTCC----CCEECCCHH
T ss_pred EEEcCCcCcccCC-cH-HHHHhc-C-----CCCCeE---Eeccccc-CCCceEEEEEh-HHHHHhhcCCCcCcccCcCHH
Confidence 9999998754443 22 222222 1 123333 7899999 99999999995 555544332 1122346888
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC--C---ceeecCCceEEEeeecCchhhccChHHHHHHHHH
Q 011570 314 TQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV--G---IGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRV 388 (483)
Q Consensus 314 ~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--g---i~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~ 388 (483)
++.++.++|+.... ++..++++++++++.+.|+++ + +....+. |+|+|++++.... ....++.+.
T Consensus 306 ~~aa~~a~L~~~~~-----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-g~~~~v~~~~~~~----~~~~~l~~~ 375 (420)
T 2pb2_A 306 ACAVAGAAFDIINT-----PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGM-GLLIGAELKPKYK----GRARDFLYA 375 (420)
T ss_dssp HHHHHHHHHHHHSS-----HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-TTEEEEEECGGGT----TCHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEec-ceEEEEEECCCch----HHHHHHHHH
Confidence 88877666543111 223445556666666666553 2 2223444 4688888874210 013367777
Q ss_pred HHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 389 IINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 389 Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
|++ +||.+.|+. ++++||+++. .+++++++++++|++++++.
T Consensus 376 l~~-~Gi~v~~~~------~~~iRl~~~~~~t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 376 GAE-AGVMVLNAG------ADVMRFAPSLVVEEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp HHH-TTEECEESS------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHH-CCCEEEeCC------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 775 699999873 5689999764 59999999999999988754
No 145
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.96 E-value=9.8e-28 Score=247.04 Aligned_cols=295 Identities=16% Similarity=0.155 Sum_probs=205.3
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH----hhh
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----RWR 163 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----~~~ 163 (483)
..|+ ..|.+ +++++++++.+.+| .+++++++|+++++..++. ++++||+|+++.|+|+.+...+ +.
T Consensus 125 ~~Y~-~~g~~-~~~~l~~~la~~~g------~~~~i~~~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~- 194 (464)
T 1ibj_A 125 YDYT-RSGNP-TRDALESLLAKLDK------ADRAFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPR- 194 (464)
T ss_dssp CSBT-TTCCH-HHHHHHHHHHHHHT------CSEEEEESSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGG-
T ss_pred cccc-CCCCH-HHHHHHHHHHHHhC------CCeEEEECCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHH-
Confidence 4576 34555 78888888888766 3477888888999998875 7899999999999999887643 33
Q ss_pred cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 164 TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 164 ~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
.|++++.++.+ |+++|++++. +++++|++++|+||||.+++ +++|+++|+++|+++|+||+|..
T Consensus 195 ~G~~v~~v~~~-------d~~~l~~~i~------~~tk~v~l~~p~NptG~v~~---l~~i~~la~~~gi~livDea~~~ 258 (464)
T 1ibj_A 195 SGVVVKRVNTT-------KLDEVAAAIG------PQTKLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMS 258 (464)
T ss_dssp GTCEEEEECTT-------SHHHHHHHCC------SSEEEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTC
T ss_pred cCCEEEEeCCC-------CHHHHHHHhc------cCceEEEEeCCCCCCCEeec---HHHHHHHHHHcCCEEEEECCCcc
Confidence 49999998863 7889988875 37999999999999999997 88999999999999999999964
Q ss_pred CccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC-CCceEEEEEecChHHHHHHHHhhh--cCCCChHHHHHHHH
Q 011570 244 TVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF-PGFRVGIIYSYNDQVVSCARKMSS--FGLVSSQTQHLIAT 320 (483)
Q Consensus 244 ~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~-~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~q~~~~~ 320 (483)
... +.++ ..++++++.|+||.++. +|+|+||++++++.+.+.+..... .+.++++.|.++.+
T Consensus 259 g~~-----~~~~----------~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~ 323 (464)
T 1ibj_A 259 PVL-----SRPL----------ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLR 323 (464)
T ss_dssp TTT-----CCGG----------GTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHH
T ss_pred ccc-----CChh----------hcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 211 1111 12567889999999864 489999999966667666655442 23467888888777
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHH----------HhhhcC-CceeecCC---ceEEEeeecCchhhccChHHHHHHH
Q 011570 321 MLSDDQFVEKFIAESAKRIAERHKAFT----------WGLSQV-GIGCLKSN---AGLFLWMDLHHLLKEQTYEAEMALW 386 (483)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~l~~~~~~l~----------~~L~~~-gi~~~~~~---~g~f~~~~l~~~~~~~~~~~~~~~~ 386 (483)
.+..... ..++.........+++. +.|.++ ++++..++ .|.+++++++. . .....+.
T Consensus 324 al~~~~~---r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~-~-----~~~~~~~ 394 (464)
T 1ibj_A 324 GIKTMAL---RIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS-V-----ALSKHLV 394 (464)
T ss_dssp HHTTHHH---HHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSC-H-----HHHHHHH
T ss_pred chhhHHH---HHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECC-H-----HHHHHHH
Confidence 7765321 11211111222222222 233333 45555443 24578888852 1 1122455
Q ss_pred HHHHHhcCeEeeCCC------------CCCC---------CCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 387 RVIINEVKLNVSPGS------------SFHC---------PNPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 387 ~~Ll~~~gV~v~pg~------------~f~~---------~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
+.|. ..||.+++|. .+.. ..++++||+++. |++++++++|++++++
T Consensus 395 ~~L~-~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~---edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 395 ETTK-YFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI---EDVDDLISDLDIAFKT 461 (464)
T ss_dssp HHCS-SSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS---SCHHHHHHHHHHHHHS
T ss_pred HhcC-cceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC---CCHHHHHHHHHHHHhh
Confidence 5543 4689998885 1221 125789999983 8899999999998864
No 146
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.96 E-value=7.8e-28 Score=245.79 Aligned_cols=328 Identities=14% Similarity=0.164 Sum_probs=223.5
Q ss_pred cccchhhhhc-HHHHHHHHhcCCCCccccccccccccccccCCC-CCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCC
Q 011570 50 QMGLAENLLC-HELVEDWLMNNPKASICSAEGLNEFKGIAIFQD-YHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGG 127 (483)
Q Consensus 50 ~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G 127 (483)
+|+.++|+++ ++.+.+++.+. + ....|++ ..+..+||++++++++ .++|++|+|
T Consensus 20 ~l~~~~p~~~~p~~~~~a~~~~-------------~-~~~~y~~~~~~~~~l~~~la~~~~----------~~~v~~~~g 75 (424)
T 2po3_A 20 PLLVGRPNRIDRARLYERLDRA-------------L-DSQWLSNGGPLVREFEERVAGLAG----------VRHAVATCN 75 (424)
T ss_dssp CEETTCCCCCCHHHHHHHHHHH-------------H-HHTCCSSSCHHHHHHHHHHHHHHT----------SSEEEEESC
T ss_pred cccccCCCCCChHHHHHHHHHH-------------H-hcCCcccCCHHHHHHHHHHHHHhC----------CCeEEEeCC
Confidence 6788888776 34444444331 0 0124776 6678999999999986 258999999
Q ss_pred hhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeC
Q 011570 128 ATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITN 207 (483)
Q Consensus 128 ~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~ 207 (483)
+++++..++.++. +||+|+++.|+|+.+...+... |.+++.+++++ .+|.+|++.|++++.+ ++++|++++
T Consensus 76 gt~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~-G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~~ 146 (424)
T 2po3_A 76 ATAGLQLLAHAAG-LTGEVIMPSMTFAATPHALRWI-GLTPVFADIDP-DTGNLDPDQVAAAVTP------RTSAVVGVH 146 (424)
T ss_dssp HHHHHHHHHHHHT-CCSEEEEESSSCTHHHHHHHHT-TCEEEEECBCT-TTSSBCHHHHGGGCCT------TEEEEEEEC
T ss_pred HHHHHHHHHHHcC-CCCEEEECCCccHHHHHHHHHc-CCEEEEEecCC-CcCCcCHHHHHHhhCc------CCcEEEEEC
Confidence 9999999999985 7899999999999999888876 99999999875 3678999999988753 688888864
Q ss_pred CCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccc-cCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCce
Q 011570 208 PSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYA-ATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFR 286 (483)
Q Consensus 208 P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~-~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlR 286 (483)
|||.+.+ +++|+++|+++|++||+||+|. ++.+++ . ++.. ... +++.||||..+++|+|
T Consensus 147 ---~tG~~~~---l~~i~~la~~~~~~li~Dea~~~g~~~~~-~---~~~~---------~~d-i~~~S~sk~K~l~~~~ 206 (424)
T 2po3_A 147 ---LWGRPCA---ADQLRKVADEHGLRLYFDAAHALGCAVDG-R---PAGS---------LGD-AEVFSFHATKAVNAFE 206 (424)
T ss_dssp ---GGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETT-E---ETTS---------SSS-EEEEECCTTSSSCCSS
T ss_pred ---CCCCcCC---HHHHHHHHHHcCCEEEEECccccCCeECC-e---eccc---------ccC-EEEEeCCCCCCccCCC
Confidence 8999866 8888999999999999999998 344433 2 1111 122 7889999666777899
Q ss_pred EEEEEecChHHHHHHHHhhhcCC-----C-----C-hHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-C
Q 011570 287 VGIIYSYNDQVVSCARKMSSFGL-----V-----S-SQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-G 354 (483)
Q Consensus 287 iG~li~~~~~l~~~~~~~~~~~~-----~-----s-~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g 354 (483)
+||++++++.+.+.+......+. . + .+.+.+++..+... +.+++..++.++.++++.+.|.++ |
T Consensus 207 ~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~~g 282 (424)
T 2po3_A 207 GGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTSL----DAFPEVIDRNRRNHAAYREHLADLPG 282 (424)
T ss_dssp CEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHTCSCTT
T ss_pred CeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 99999964666666554332210 0 0 11222222222111 224455566677778888999887 8
Q ss_pred ceeec-CCce----EEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCC--------------CCCE-----
Q 011570 355 IGCLK-SNAG----LFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCP--------------NPGW----- 410 (483)
Q Consensus 355 i~~~~-~~~g----~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~--------------~~~~----- 410 (483)
+++.. +.++ ++++++++...... ...++.+.|. ++||.+++. |... .+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~l~~~L~-~~gI~v~~~--~~~~~~~~~~~~~~g~~~~~~~~r~~~ 356 (424)
T 2po3_A 283 VLVADHDRHGLNNHQYVIVEIDEATTGI---HRDLVMEVLK-AEGVHTRAY--FSPGCHELEPYRGQPHAPLPHTERLAA 356 (424)
T ss_dssp EEECCGGGGSCCCCCCEEEEECHHHHSS---CHHHHHHHHH-HTTEECBCT--TCSCGGGSTTTTTSCCCCCHHHHHHHT
T ss_pred ccccCCCCCCccccEEEEEEECCccchh---hHHHHHHHHH-HCCCceecc--cCCccccchhhhhcCCCCChhHHHHhc
Confidence 88765 4443 23446665310000 1225566554 679999872 2210 0122
Q ss_pred --EEEEecc-CCHHHHHHHHHHHHHHHHHhhhc
Q 011570 411 --FRVCFAN-MDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 411 --iRis~~~-~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
+|+++.. .+++++++++++|++++++..+.
T Consensus 357 ~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~~~~ 389 (424)
T 2po3_A 357 RVLSLPTGTAIGDDDIRRVADLLRLCATRGREL 389 (424)
T ss_dssp TEEEECCSTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEeeCCCCCCHHHHHHHHHHHHHHHhhhHHH
Confidence 6666433 69999999999999998776543
No 147
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.96 E-value=1.5e-27 Score=240.76 Aligned_cols=296 Identities=15% Similarity=0.140 Sum_probs=210.5
Q ss_pred CCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcEEEE
Q 011570 92 DYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVP 170 (483)
Q Consensus 92 ~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~ 170 (483)
+..+..++++++|++++ .+++++|+|+++++..++.++ +++||+|+++.|+|+.+...++.. |.+++.
T Consensus 37 ~~~~~~~l~~~la~~~~----------~~~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~ 105 (393)
T 1mdo_A 37 TGPKNQELEAAFCRLTG----------NQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMIVLL-GANPVM 105 (393)
T ss_dssp SSHHHHHHHHHHHHHHC----------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHHHHT-TCEEEE
T ss_pred CChHHHHHHHHHHHHhC----------CCcEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHhHHHHHHHC-CCEEEE
Confidence 34578999999999986 248999999999999999999 899999999999999999888875 999999
Q ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC-ccCCC
Q 011570 171 VVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT-VFTKE 249 (483)
Q Consensus 171 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~-~~~~~ 249 (483)
++++++ ++.+|++.|++++.+ ++++|+++ ||||.+.+ +++|.++|+++|++||+||+|+.. .+..
T Consensus 106 v~~~~~-~~~~d~~~l~~~l~~------~~~~v~~~---~~~G~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~- 171 (393)
T 1mdo_A 106 VDVDRD-TLMVTPEHIEAAITP------QTKAIIPV---HYAGAPAD---LDAIYALGERYGIPVIEDAAHATGTSYKG- 171 (393)
T ss_dssp ECBCTT-TCCBCHHHHHHHCCT------TEEEECCB---CGGGCCCC---HHHHHHHHHHHTCCBCEECTTCTTCEETT-
T ss_pred EeccCC-cCCCCHHHHHHhcCC------CceEEEEe---CCCCCcCC---HHHHHHHHHHcCCeEEEECccccCCeECC-
Confidence 998753 578999999998853 68888776 48999987 888889999999999999999853 2322
Q ss_pred CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcC---------------------
Q 011570 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFG--------------------- 308 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~--------------------- 308 (483)
. + + . . +++++.||||..+++|.|+||++++++.+.+.+......+
T Consensus 172 ~---~---~-~-----~--~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (393)
T 1mdo_A 172 R---H---I-G-----A--RGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLA 237 (393)
T ss_dssp E---E---T-T-----S--SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESS
T ss_pred e---e---c-C-----C--CCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccc
Confidence 1 1 1 0 1 5678899994444456699999996566666655432211
Q ss_pred -----CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeec-C-----CceEEEeeecCchhhcc
Q 011570 309 -----LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLK-S-----NAGLFLWMDLHHLLKEQ 377 (483)
Q Consensus 309 -----~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~-~-----~~g~f~~~~l~~~~~~~ 377 (483)
..+++...++...+.. +++..++.++.++++.+.|.+.++++.. + .+++++|++++......
T Consensus 238 ~g~~~~~~~~~~a~~~~~l~~-------~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 310 (393)
T 1mdo_A 238 PGYKYNLPDLNAAIALAQLQK-------LDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGI 310 (393)
T ss_dssp CCCBCCCCHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSS
T ss_pred cCccCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEEeccccccc
Confidence 1233332222222221 2334444556778888889887766542 2 45568899987310000
Q ss_pred ChHHHHHHHHHHHHhcCeEeeCCCCCC--------------CC-----CCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 378 TYEAEMALWRVIINEVKLNVSPGSSFH--------------CP-----NPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 378 ~~~~~~~~~~~Ll~~~gV~v~pg~~f~--------------~~-----~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
...++.+.|.+ +||.+++|..+. .+ ..+++||+++. .++++++.++++|+++++..
T Consensus 311 ---~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 386 (393)
T 1mdo_A 311 ---TRDALMASLKT-KGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQG 386 (393)
T ss_dssp ---CHHHHHHHHHH-TTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred ---CHHHHHHHHHh-CCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 12366777765 699999986541 00 13479999975 59999999999999887553
No 148
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.96 E-value=2.4e-27 Score=244.80 Aligned_cols=356 Identities=9% Similarity=-0.022 Sum_probs=225.9
Q ss_pred CCCCcccccch--hhhhc--HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 44 NPNGVIQMGLA--ENLLC--HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 44 ~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
+...+||++.+ .++++ ++.+.+++.+.. .. ....|....+..++++++++++.+..+ .+.
T Consensus 49 ~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~----------~~--~~~~~~~~~~~~~~~~~la~~l~~~~~----~~~ 112 (460)
T 3gju_A 49 NGRKSIDAFAGLYCVNVGYGRQKIADAIATQA----------KN--LAYYHAYVGHGTEASITLAKMIIDRAP----KGM 112 (460)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHH----------HH--HSCCCCCTTCCCHHHHHHHHHHHHHSC----TTE
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHH----------Hh--ccccccccccCCHHHHHHHHHHHhhCC----CCc
Confidence 34567898877 34443 344555443310 00 011233334456777888888776543 467
Q ss_pred CcEEEeCChhHHHHHHHHHhcC--------CCCeEEEeCCCCcChHHHHhhhcCc------------EEEEeecCC--C-
Q 011570 120 DRIVMSGGATGAHETVAFCLAD--------PGDAFLVPTPYYPGFDRDLRWRTGV------------QLVPVVCDS--S- 176 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~--------~gd~Vlv~~P~y~~~~~~~~~~~G~------------~~~~v~~~~--~- 176 (483)
++|++|+|+++++..++.++.. +++.|++.+|+|+++........|. .+..++... .
T Consensus 113 ~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 192 (460)
T 3gju_A 113 SRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRR 192 (460)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGC
T ss_pred CEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccC
Confidence 8999999999999999988863 5699999999998766544332111 233344221 0
Q ss_pred CCcccC--------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCcC-CCCHHHHHHHHHHHhhcCcEEEEccccccCccC
Q 011570 177 NDFKVT--------MEALEAAYEKAQESNIRIKGVLITNPSNPLGT-FLDRETLKDIVSFINEKNIHLVCDEIYAATVFT 247 (483)
Q Consensus 177 ~~~~~d--------~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~-~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~ 247 (483)
+++..+ +++|++++.+.. ..++++|++..++|++|. +++.+.+++|.++|++||+++|+||+|.++...
T Consensus 193 ~~~g~~~~~~~~~~~~~le~~i~~~~--~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~ 270 (460)
T 3gju_A 193 TDRSMSEEQFSQHCADKLEEMILAEG--PETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRL 270 (460)
T ss_dssp SCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT
T ss_pred CccccChhHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcc
Confidence 111233 578888886421 125666665555777777 778888999999999999999999999975444
Q ss_pred CCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh---------hhcCCCChHHHHH
Q 011570 248 KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM---------SSFGLVSSQTQHL 317 (483)
Q Consensus 248 ~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~---------~~~~~~s~~~q~~ 317 (483)
+ .. ...... . .... +.||||+++ +| +|+||+++ ++.+.+.+... ...+..+++++.+
T Consensus 271 g-~~-~~~~~~-~-----~~pd---i~t~sK~l~-gG~~~lg~v~~-~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aa 337 (460)
T 3gju_A 271 G-TM-FGSDHY-G-----IKPD---LITIAKGLT-SAYAPLSGVIV-ADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAA 337 (460)
T ss_dssp S-SS-CHHHHH-T-----CCCS---EEEECGGGT-TTSSCCEEEEE-EHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHH
T ss_pred c-cc-chHhhc-C-----CCCC---eeeeehhhc-CCCCCeEEEEE-CHHHHHHHhcccccccccccCCCCCCCHHHHHH
Confidence 3 22 222222 1 1122 237899997 56 89999999 56666665421 1224568888888
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-ceeecCCceEEEeeecCchhhcc-----ChHHHHHHHHHHHH
Q 011570 318 IATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVG-IGCLKSNAGLFLWMDLHHLLKEQ-----TYEAEMALWRVIIN 391 (483)
Q Consensus 318 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~~~~~~g~f~~~~l~~~~~~~-----~~~~~~~~~~~Ll~ 391 (483)
+.++|+.... ++++++.++.....++.+.+.+.+++ +....+.| .|+++++....... ......+++..+++
T Consensus 338 a~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 415 (460)
T 3gju_A 338 GVANLELIDE-MDLVTNAGETGAYFRAELAKAVGGHKNVGEVRGDG-MLAAVEFVADKDDRVFFDASQKIGPQVATALAA 415 (460)
T ss_dssp HHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEET-TEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeee-EEEEEEEccCccccccccchHHHHHHHHHHHHH
Confidence 8877763211 22344555555555666767776664 44455554 57778776421100 00113356777775
Q ss_pred hcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 392 EVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 392 ~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+||.++|+. ..+++||+++. .+++++++++++|++++++..
T Consensus 416 -~Gv~v~~~~-----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 457 (460)
T 3gju_A 416 -SGVIGRAMP-----QGDILGFAPPLCLTREQADIVVSKTADAVKSVF 457 (460)
T ss_dssp -TTEECEECS-----SSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCeEEecCC-----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 599999875 24789999754 599999999999999998653
No 149
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.96 E-value=7.5e-28 Score=252.05 Aligned_cols=310 Identities=13% Similarity=0.139 Sum_probs=225.2
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcE--EEeCChhHHHHHHHHHhcCCC--------CeEEEeCCCCcChHHH
Q 011570 90 FQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRI--VMSGGATGAHETVAFCLADPG--------DAFLVPTPYYPGFDRD 159 (483)
Q Consensus 90 Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i--~it~G~~~al~~~~~~l~~~g--------d~Vlv~~P~y~~~~~~ 159 (483)
|..+.+..++++++++++.+.+| .+.+++++ ++|+|+++++..++.++.++| |+|+++.|+|..+...
T Consensus 131 ~~~~p~~~~le~~l~~~la~~~g--~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~ 208 (514)
T 3mad_A 131 PDLWPSTAKFEAEVVAMTAHMLG--GDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKA 208 (514)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHTT--GGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHH
T ss_pred cccChHHHHHHHHHHHHHHHHcC--CCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHH
Confidence 44444567888889888888877 33344788 999999999999999998776 9999999999999999
Q ss_pred HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcc
Q 011570 160 LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDE 239 (483)
Q Consensus 160 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~De 239 (483)
++.. |.+++.+++++ ++.+|+++|++++.+ ++++|++++|+||||.+.+ +++|.++|++||+++|+||
T Consensus 209 ~~~~-G~~v~~v~~~~--~~~~d~~~Le~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDe 276 (514)
T 3mad_A 209 AQYF-GIKLVRTPLDA--DYRADVAAMREAITP------NTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDA 276 (514)
T ss_dssp HHHH-TCEEEEECBCT--TSCBCHHHHHHHCCT------TEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEEC
T ss_pred HHHc-CCeeEEeeeCC--CCCCCHHHHHHHhcc------CCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEec
Confidence 9886 99999999875 678999999999864 7899999999999999999 7888999999999999999
Q ss_pred ccccCccC--C--CCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhh---------
Q 011570 240 IYAATVFT--K--ESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSS--------- 306 (483)
Q Consensus 240 ay~~~~~~--~--~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~--------- 306 (483)
+|+++.+. . ......+... ..+..+++.|++|.++ +|.++|++++.++.+.........
T Consensus 277 a~~~~~~~~~~~~g~~~~~~~~~-------~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (514)
T 3mad_A 277 CLGGFILPWAERLGYPVPPFDFR-------LEGVTSVSADTHKYGY-GAKGTSVILYRRPDLLHYQYFIAADWPGGLYFS 348 (514)
T ss_dssp TTTTTTHHHHHHTTCCCCCCSTT-------STTCCEEEECTTTTTC-CCSSCEEEEESSHHHHTTTCEEESSCTTCSEEE
T ss_pred ccccccchhHHhcCCCCCccccc-------CCCCcEEEECchhccC-CCCCeEEEEEeCHHHhccccccccccCCCcccC
Confidence 99876431 0 0100111101 2245677889999864 788999999976654432100000
Q ss_pred ---cCCCChH---HHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecCchhhccCh
Q 011570 307 ---FGLVSSQ---TQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLHHLLKEQTY 379 (483)
Q Consensus 307 ---~~~~s~~---~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~~~~~~~~~ 379 (483)
.+..+.. ++.++...+. ...+++..+++.++++++.+.|++. |+++..+..+ ++|+..+.. +
T Consensus 349 ~~~~gs~~~~~~~a~~aal~~l~-----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~-~~~~~~~~~-~---- 417 (514)
T 3mad_A 349 PTFAGSRPGALSATAWAAMLSLG-----EEGYLDATRRILQAADRLKAGVRAIPSLKILGDPLW-VIAVASDEL-N---- 417 (514)
T ss_dssp SSSCSSCCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCSS-EEEEECSSS-C----
T ss_pred CccCCCCchHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCeE-EEEEeCCCC-C----
Confidence 0111222 2222322222 2235666777888889999999987 8888766655 777766421 1
Q ss_pred HHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc--CCHHHHHHHHHHHHHHHHHhhhc
Q 011570 380 EAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN--MDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 380 ~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~--~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
..++.+.|.+ +||.+ +|..| ++++|++++. .+++++++++++|++++++.++.
T Consensus 418 --~~~l~~~L~~-~Gi~v-~g~~~----~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~~ 472 (514)
T 3mad_A 418 --IYQVMEEMAG-RGWRL-NGLHR----PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRAH 472 (514)
T ss_dssp --HHHHHHHHHT-TTCBC-EEETT----TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHh-cCCEe-ccCCC----CCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2367777765 59987 55433 4679999974 36799999999999999887654
No 150
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.96 E-value=6.8e-28 Score=249.75 Aligned_cols=303 Identities=14% Similarity=0.134 Sum_probs=218.6
Q ss_pred CCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh----cCCCC-----eEEEeCCCCcChHHHHhhh
Q 011570 93 YHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL----ADPGD-----AFLVPTPYYPGFDRDLRWR 163 (483)
Q Consensus 93 ~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l----~~~gd-----~Vlv~~P~y~~~~~~~~~~ 163 (483)
..|..++++++++++.+.+| .+. .+++|+|+++++..++.++ .++|| +|+++.|+|+.+...+...
T Consensus 102 ~~g~~~l~~~l~~~la~~~g----~~~-~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~ 176 (474)
T 1wyu_B 102 AQGALRLMWELGEYLKALTG----MDA-ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMA 176 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHT----CSE-EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHHHC----CCc-eeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHC
Confidence 45677899999999988877 222 4778899999998755554 46887 9999999999999888875
Q ss_pred cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 164 TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 164 ~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
|++++.+++++ ++.+|+++|++++.+ ++++|++++| ||||.+. +++++|+++|+++|+++|+||+|..
T Consensus 177 -G~~vv~v~~~~--~~~~d~~~L~~~i~~------~t~~v~~~~p-n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~ 244 (474)
T 1wyu_B 177 -GYQVREIPSGP--EGEVDLEALKRELGP------HVAALMLTNP-NTLGLFE--RRILEISRLCKEAGVQLYYDGANLN 244 (474)
T ss_dssp -TCEEEEECBCT--TSSBCHHHHHHHCST------TEEEEEECSS-CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGG
T ss_pred -CCEEEEecCCC--CCCcCHHHHHHhhCC------CceEEEEECC-CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhh
Confidence 99999999864 578999999998853 7899999998 6899983 3489999999999999999999976
Q ss_pred CccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC-C---ceEEEEEecChHHHHHHHH-h--------------
Q 011570 244 TVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP-G---FRVGIIYSYNDQVVSCARK-M-------------- 304 (483)
Q Consensus 244 ~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~-G---lRiG~li~~~~~l~~~~~~-~-------------- 304 (483)
..++. .+...+ +.++++.|+||+|+.| | +|+||++++++ +.+.+.. .
T Consensus 245 ~~~g~----~~~~~~---------g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~-l~~~l~~~~~~~~g~~~~~~~~~ 310 (474)
T 1wyu_B 245 AIMGW----ARPGDM---------GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAH-LAPYLPVPLVERGEEGFYLDFDR 310 (474)
T ss_dssp GTTTT----CCHHHH---------TCSEEECCTTTTTCCCCTTSCCCCCCEEECGG-GGGGCCSCEEEECSSCEEEECCC
T ss_pred hhccC----CCcccC---------CCcEEEEeCccccccCCCCCCCCeEEEEEcHH-HHHhCCCCeeeccCCeeEecccC
Confidence 54321 122222 3457788999999766 4 69999999544 4333220 0
Q ss_pred ----h--hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEE-EeeecCchhhcc
Q 011570 305 ----S--SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLF-LWMDLHHLLKEQ 377 (483)
Q Consensus 305 ----~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f-~~~~l~~~~~~~ 377 (483)
. ..+..+..++.++..++...+ .+.+++..+++.++++++.+.|.+.|+++..+...+. +|++++...
T Consensus 311 ~~~~~~~~~~~~~~~~~~aa~~~l~~~g--~~~l~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~--- 385 (474)
T 1wyu_B 311 PKSIGRVRSFYGNFLALVRAWAYIRTLG--LEGLKKAAALAVLNARYLKELLKEKGYRVPYDGPSMHEFVAQPPEGF--- 385 (474)
T ss_dssp TTCCCCSSSTTSCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCBCSSCSSCCSCEEEBCSTTC---
T ss_pred cccCcccccCcCcHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCcEecCCCCcceEEEEEcCCCC---
Confidence 0 001245566666666654322 3446677788889999999999888887633332221 566663211
Q ss_pred ChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 378 TYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 378 ~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
...++++.|+++ ||.+ |+..|.....+++||+++. .+++++++++++|++++++
T Consensus 386 ---~~~~l~~~L~~~-Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 386 ---RALDLAKGLLEL-GFHP-PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp ---CHHHHHHHHHHT-TCCC-CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred ---CHHHHHHHHHHC-Cccc-cccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 134778888865 9985 6666643346789999985 3899999999999998765
No 151
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.96 E-value=5.5e-28 Score=248.98 Aligned_cols=359 Identities=12% Similarity=0.072 Sum_probs=217.5
Q ss_pred CCCCcccccch--hhhhc--HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 44 NPNGVIQMGLA--ENLLC--HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 44 ~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
....+||+..+ .+.++ ++.+.+++.+. +.....|....+..+++.++++++.+..+. -..
T Consensus 62 ~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~-------------~~~~~~~~~~~~~~~~~~~la~~l~~~~~~---~~~ 125 (453)
T 4ffc_A 62 DGNSFIDLGAGIAVTTVGASHPAVAAAIADQ-------------ATHFTHTCFMVTPYEQYVQVAELLNALTPG---DHD 125 (453)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHH-------------HHHCSCCTTTTSCCHHHHHHHHHHHHHSSC---SSC
T ss_pred CCCEEEEcCCCcccCcCCCCCHHHHHHHHHH-------------HHhccccccCcCCCHHHHHHHHHHHHhCCC---CCC
Confidence 34568899887 44443 44455544331 111223444445567777888877766431 125
Q ss_pred CcEEEeCChhHHHHHHHHHhcC--CCCeEEEeCCCCcChHHHHhhhcCc-------------EEEEeecC--CCCCcccC
Q 011570 120 DRIVMSGGATGAHETVAFCLAD--PGDAFLVPTPYYPGFDRDLRWRTGV-------------QLVPVVCD--SSNDFKVT 182 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~~G~-------------~~~~v~~~--~~~~~~~d 182 (483)
++|++|+|+++++..++..+.. .++.|++.+|+|+++........+. .+..++.+ ..+.+..+
T Consensus 126 ~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 205 (453)
T 4ffc_A 126 KRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLT 205 (453)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCC
T ss_pred cEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccc
Confidence 7999999999999999977642 4589999999998766554433111 33444433 11122233
Q ss_pred -HHHHHHHHHHHHhc-CCceeEEEEeCCCCCCc--CCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHh
Q 011570 183 -MEALEAAYEKAQES-NIRIKGVLITNPSNPLG--TFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEI 258 (483)
Q Consensus 183 -~~~l~~~i~~~~~~-~~~~~~i~l~~P~NPtG--~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l 258 (483)
.+.++..++...+. +++..++++++|+||+| .+.+.+.+++|.++|++||+++|+||+|.++.+.+ . +......
T Consensus 206 ~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g-~-~~a~~~~ 283 (453)
T 4ffc_A 206 GEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTG-A-WFASEHE 283 (453)
T ss_dssp HHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS-S-SSTHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCccc-c-cchhhhc
Confidence 23333222221110 12445678888988877 44588889999999999999999999998754443 2 2222222
Q ss_pred hhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--hcCCCChHHHHHHHHhcCChhHHHHHHHHHH
Q 011570 259 IDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--SFGLVSSQTQHLIATMLSDDQFVEKFIAESA 336 (483)
Q Consensus 259 ~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 336 (483)
. .... +.||||+++ +|+|+||+++ ++.+.+.+.... ..+..++++|.++.++|+.... +++.++.+
T Consensus 284 -~-----~~pd---i~t~sK~~~-~G~~~G~~~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~ 351 (453)
T 4ffc_A 284 -G-----IVPD---IVTMAKGIA-GGMPLSAVTG-RAELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRE-LDLPARAR 351 (453)
T ss_dssp -T-----CCCS---EEEECGGGG-TTSSCEEEEE-EHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHH-TTHHHHHH
T ss_pred -C-----CCcc---hHhhhhhhc-CCcCeEEEEE-CHHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhh-hhHHHHHH
Confidence 1 1112 347999998 5999999999 566655443222 2245788898888777753211 11222222
Q ss_pred HHHHHHHHHHHHhhhcCC-ceeecCCceEEEeeecCchh-hccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEE
Q 011570 337 KRIAERHKAFTWGLSQVG-IGCLKSNAGLFLWMDLHHLL-KEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVC 414 (483)
Q Consensus 337 ~~l~~~~~~l~~~L~~~g-i~~~~~~~g~f~~~~l~~~~-~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis 414 (483)
+.....++.+.+.+.+++ +....+. |+|+|+++.... ..........++..+++ +||.+.|+..| .+++||+
T Consensus 352 ~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~----~~~iRi~ 425 (453)
T 4ffc_A 352 AIEASVTSRLSALAEEVDIIGEVRGR-GAMLAIEIVKPGTLEPDAALTKSIAAEALS-QGVLILTCGTF----GNVIRLL 425 (453)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEEEEEE-TTEEEEEEBCTTSCCBCHHHHHHHHHHHHH-TTEECCEECTT----SCEEEEC
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEee-ceEEEEEEecCcccCCCHHHHHHHHHHHHh-CCCEEecCCCC----CCEEEEE
Confidence 222333333444444443 3333444 568888874310 00111223467777775 59999998654 3589999
Q ss_pred ecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 415 FAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 415 ~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
++. .+++++++++++|++++++..
T Consensus 426 ~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (453)
T 4ffc_A 426 PPLVIGDDLLDEGITALSDIIRAKA 450 (453)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 876 599999999999999998753
No 152
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.96 E-value=1e-27 Score=243.95 Aligned_cols=301 Identities=13% Similarity=0.090 Sum_probs=197.3
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChH---HHHhhh-cCcEEEEee
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFD---RDLRWR-TGVQLVPVV 172 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~---~~~~~~-~G~~~~~v~ 172 (483)
..+++...+++.+.+| +++++|++++| ++++..++.+++++||+|+++.|+|+.+. ...... .+...++++
T Consensus 75 ~~~~~~~~~~la~~~~----~~~~~v~~~sG-s~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 149 (420)
T 3gbx_A 75 DVVEQLAIDRAKELFG----ADYANVQPHSG-SQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYG 149 (420)
T ss_dssp HHHHHHHHHHHHHHHT----CSEEECCCSSH-HHHHHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEE
T ss_pred HHHHHHHHHHHHHHhC----CCCceeEecCc-HHHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEecc
Confidence 4445444455555555 46677777777 78999999999999999999999998743 111111 145666666
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
.+ .++.+|+++|++++++. ++++|++++|+||+ ..+ +++|.++|++||++||+||+|....+.. ..+
T Consensus 150 ~~--~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~~~--~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~-~~~ 216 (420)
T 3gbx_A 150 ID--ESGKIDYDEMAKLAKEH-----KPKMIIGGFSAYSG--VVD---WAKMREIADSIGAYLFVDMAHVAGLIAA-GVY 216 (420)
T ss_dssp EC--TTCSCCHHHHHHHHHHH-----CCSEEEECCTTCCS--CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHT-TSS
T ss_pred CC--ccCCcCHHHHHHHHHhc-----CCeEEEEecCccCC--ccC---HHHHHHHHHHcCCEEEEECCcchhceec-ccC
Confidence 65 45689999999999762 58999999999974 556 8899999999999999999985432222 111
Q ss_pred chHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecC--hHHHHHHHHhhhc---CCCChHHHHHHHHhcCChhH
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYN--DQVVSCARKMSSF---GLVSSQTQHLIATMLSDDQF 327 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~--~~l~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~ 327 (483)
.... ....+++.|+||+++ |.+.||+++++ +.+.+.+...... +..+...+.+++..+.. .
T Consensus 217 ~~~~----------~~~di~~~s~sK~~~--g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~--~ 282 (420)
T 3gbx_A 217 PNPV----------PHAHVVTTTTHKTLA--GPRGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKE--A 282 (420)
T ss_dssp CCST----------TTSSEEEEESSGGGC--SCSCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHH--T
T ss_pred Cccc----------ccCCEEEeecccCCC--CCCceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHH--H
Confidence 1111 123478899999984 55569999965 3566555443222 22333333333322211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCceeecC-CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeC-------
Q 011570 328 VEKFIAESAKRIAERHKAFTWGLSQVGIGCLKS-NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSP------- 399 (483)
Q Consensus 328 ~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~-~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~p------- 399 (483)
..+++++.++++.++++++.+.|.+.|+++..+ ..++++|+.++.... .. +....+++++||.+.+
T Consensus 283 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~l~~~gi~v~~~~~~~~~ 356 (420)
T 3gbx_A 283 MEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGGTENHLFLLDLVDKNL-----TG-KEADAALGRANITVNKNSVPNDP 356 (420)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTC-----CH-HHHHHHHHHTTEECEEECCTTCS
T ss_pred HhHhHHHHHHHHHHHHHHHHHHHHhcCCeeccCCCCCeEEEEEcCCCCC-----CH-HHHHHHHHHCCcEeccccCCCCc
Confidence 122356677788888899999998889887653 456788988864211 11 3344445677999998
Q ss_pred CCCCCCCCCCEEEEEecc-----CCHHHHHHHHHHHHHHHHHhh
Q 011570 400 GSSFHCPNPGWFRVCFAN-----MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 400 g~~f~~~~~~~iRis~~~-----~~~e~l~~~l~~L~~~l~~~~ 438 (483)
|..|+ +..+||+++. .+++++++++++|++++++..
T Consensus 357 ~~~~~---~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~ 397 (420)
T 3gbx_A 357 KSPFV---TSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNIN 397 (420)
T ss_dssp SCTTT---CSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTTT
T ss_pred cccCC---CcceEEecchhcccCCCHHHHHHHHHHHHHHHhCcc
Confidence 43333 3459999964 247999999999999987753
No 153
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.95 E-value=1.5e-26 Score=238.76 Aligned_cols=351 Identities=9% Similarity=0.001 Sum_probs=221.1
Q ss_pred CCCcccccch--hhhhc--HHHHHHHHhcCCCCccccccccccccccc-cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 45 PNGVIQMGLA--ENLLC--HELVEDWLMNNPKASICSAEGLNEFKGIA-IFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 45 ~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
...+||++.+ .+.++ ++.+.+++.+.. .... .|+...+..++++++++++.+.++ .+.
T Consensus 49 g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~-------------~~~~~~~~~~~~~~~~~~~la~~l~~~~~----~~~ 111 (459)
T 4a6r_A 49 GNKIIDGMAGLWCVNVGYGRKDFAEAARRQM-------------EELPFYNTFFKTTHPAVVELSSLLAEVTP----AGF 111 (459)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHHH-------------HHCSCCCTTSSSCCHHHHHHHHHHHHHSC----TTC
T ss_pred CCEEEECCCchhcccCCCCCHHHHHHHHHHH-------------HhccccccccccCCHHHHHHHHHHHHhCC----CCC
Confidence 4567898877 44443 344555443310 1111 233334456778888888877654 467
Q ss_pred CcEEEeCChhHHHHHHHHHhcC--------CCCeEEEeCCCCcChHHHHhhhc--------------CcEEEEeecCCC-
Q 011570 120 DRIVMSGGATGAHETVAFCLAD--------PGDAFLVPTPYYPGFDRDLRWRT--------------GVQLVPVVCDSS- 176 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~--------~gd~Vlv~~P~y~~~~~~~~~~~--------------G~~~~~v~~~~~- 176 (483)
++|++|+|+++++..++.++.. +++.|++.+|+|+++........ +...+++|....
T Consensus 112 ~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 191 (459)
T 4a6r_A 112 DRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKH 191 (459)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHH
T ss_pred CEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccC
Confidence 8999999999999999998875 57999999999988765544331 122233222000
Q ss_pred CCcccC--------HHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcC-CCCHHHHHHHHHHHhhcCcEEEEccccccCcc
Q 011570 177 NDFKVT--------MEALEAAYEKAQESNIRIKGVLITNP-SNPLGT-FLDRETLKDIVSFINEKNIHLVCDEIYAATVF 246 (483)
Q Consensus 177 ~~~~~d--------~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~-~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~ 246 (483)
+++ +| +++|++++.+... .+++ +++++| +|++|. +++.+++++|.++|++||+++|+||+|.++..
T Consensus 192 ~~~-~d~~~~~~~~~~~le~~i~~~~~--~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr 267 (459)
T 4a6r_A 192 GKD-MTPDEFGVVAARWLEEKILEIGA--DKVA-AFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGR 267 (459)
T ss_dssp CTT-CCHHHHHHHHHHHHHHHHHHHCG--GGEE-EEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred Ccc-cCHHHHHHHHHHHHHHHHHHcCC--CCEE-EEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 112 34 7888888864211 1344 555666 455555 55899999999999999999999999988544
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHH-----HhhhcCCCChHHHHHHHHh
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCAR-----KMSSFGLVSSQTQHLIATM 321 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~-----~~~~~~~~s~~~q~~~~~~ 321 (483)
.+ .. ...... . ....+ .+|||+++.+|+|+||+++ ++.+.+.+. .....+..+++++.++.++
T Consensus 268 ~G-~~-~~~~~~-~-----~~pdi---~t~sK~l~gg~~~lg~v~~-~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aa 335 (459)
T 4a6r_A 268 TG-EW-FGHQHF-G-----FQPDL---FTAAKGLSSGYLPIGAVFV-GKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHAN 335 (459)
T ss_dssp TS-SS-SHHHHH-T-----CCCSE---EEECGGGGTTSSCCEEEEE-CHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHH
T ss_pred cc-cc-chHhhc-C-----CCCCe---eehhhhhcCCCCCccceee-CHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHH
Confidence 43 22 222222 1 11222 3789999844499999999 566766664 1222345788999888887
Q ss_pred cCChhHHHHHHHHHH-HHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecCchhhcc-----ChHHHHHHHHHHHHhcC
Q 011570 322 LSDDQFVEKFIAESA-KRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLHHLLKEQ-----TYEAEMALWRVIINEVK 394 (483)
Q Consensus 322 l~~~~~~~~~~~~~~-~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~~~~~~~-----~~~~~~~~~~~Ll~~~g 394 (483)
|+.... +++.++.+ +.....++.+.+.|.++ .+....+.| .|+++++....... .......++..+++ +|
T Consensus 336 l~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G 412 (459)
T 4a6r_A 336 VAALRD-EGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRGVG-MVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFR-NN 412 (459)
T ss_dssp HHHHHH-TCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEET-TEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHH-TT
T ss_pred HHHHhc-chHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEE-EEEEEEEecCccccccccchHHHHHHHHHHHHH-CC
Confidence 763211 12233333 33334444454555555 345555555 57777775421110 01113467777775 59
Q ss_pred eEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 395 LNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 395 V~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
|.++|+. +++||++.. .+++++++++++|++++++..
T Consensus 413 v~v~~~g-------~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (459)
T 4a6r_A 413 LIMRACG-------DHIVSAPPLVMTRAEVDEMLAVAERCLEEFE 450 (459)
T ss_dssp EECEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEecCC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999862 689999755 599999999999999998764
No 154
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.95 E-value=2.4e-26 Score=231.77 Aligned_cols=282 Identities=18% Similarity=0.166 Sum_probs=196.3
Q ss_pred CCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH----hhhcCcEEE
Q 011570 94 HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----RWRTGVQLV 169 (483)
Q Consensus 94 ~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----~~~~G~~~~ 169 (483)
.+..+|+++++++++ .+ +.|++++| ++++..++.+++++||+|+++.|+|++....+ +. .|.+++
T Consensus 52 ~~~~~l~~~la~~~~--------~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~-~g~~~~ 120 (386)
T 1cs1_A 52 PTRDVVQRALAELEG--------GA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKR-GCYRVL 120 (386)
T ss_dssp HHHHHHHHHHHHHHT--------CS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTT-TSCEEE
T ss_pred ccHHHHHHHHHHHhC--------CC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHh-cCCEEE
Confidence 356899999999986 22 66777666 89999999999999999999999998755533 44 489998
Q ss_pred EeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC
Q 011570 170 PVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE 249 (483)
Q Consensus 170 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~ 249 (483)
.++.+ |++.+++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|..+.+..
T Consensus 121 ~~~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~- 183 (386)
T 1cs1_A 121 FVDQG-------DEQALRAALAE------KPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN- 183 (386)
T ss_dssp EECTT-------CHHHHHHHHHT------CCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC-
T ss_pred EeCCC-------CHHHHHHhhcc------CCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 88753 78999998864 7899999999999999998 8888999999999999999998753321
Q ss_pred CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceE-EEEEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChh
Q 011570 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRV-GIIYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQ 326 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRi-G~li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~ 326 (483)
+. . .++++++.|+||.+|.+|.|+ ||++++++.+.+.+...... +..+++.+.++...+..
T Consensus 184 ----~~-~---------~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-- 247 (386)
T 1cs1_A 184 ----PL-A---------LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT-- 247 (386)
T ss_dssp ----GG-G---------GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT--
T ss_pred ----cc-c---------cCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhcccH--
Confidence 11 1 145688999999999899997 99999664666655443332 33566776665555542
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCC-ceee-cC----------------CceEEEeeecCchhhccChHHHHHHHHH
Q 011570 327 FVEKFIAESAKRIAERHKAFTWGLSQVG-IGCL-KS----------------NAGLFLWMDLHHLLKEQTYEAEMALWRV 388 (483)
Q Consensus 327 ~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~~-~~----------------~~g~f~~~~l~~~~~~~~~~~~~~~~~~ 388 (483)
+....+.+.++++.+.+.|+++. +... .+ ..+.++.+.++.. ...+. .
T Consensus 248 -----~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~ 313 (386)
T 1cs1_A 248 -----LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD--------EQTLR-R 313 (386)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSC--------HHHHH-H
T ss_pred -----HHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCC--------HHHHH-H
Confidence 23334445666677777776652 2211 11 1134566666531 11333 3
Q ss_pred HHHhcCeEeeCCCCCC-------------------------CCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 389 IINEVKLNVSPGSSFH-------------------------CPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 389 Ll~~~gV~v~pg~~f~-------------------------~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
.+++.||.+++++ |+ ...++++||+++. ++.++.+++|.+++++.
T Consensus 314 ~l~~~gi~~~~~~-~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~---~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 314 FLGGLSLFTLAES-LGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRAA 383 (386)
T ss_dssp HHHTCSSSEEBSC-CCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHHHH
T ss_pred HHHhCCcceEccc-CCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEcc---CCHHHHHHHHHHHHHHh
Confidence 4567899887432 11 0125799999984 45566666666666554
No 155
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.95 E-value=2.2e-28 Score=243.83 Aligned_cols=286 Identities=11% Similarity=0.086 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCCh-hHHHHHHHHHhcCC---CCeEEEeCCCCcChHHHHhhhcCcEEEEee
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGA-TGAHETVAFCLADP---GDAFLVPTPYYPGFDRDLRWRTGVQLVPVV 172 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~-~~al~~~~~~l~~~---gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~ 172 (483)
.++.+++.+++.+++| .+ ++++|++|+|+ ++++..++.+++.+ ||.|+++.++|..+ ..++.. | +++.++
T Consensus 47 ~~~~~~l~~~la~~~g--~~-~~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~-~~~~~~-g-~~~~v~ 120 (360)
T 1w23_A 47 EEVHEQAQNLLRELLQ--IP-NDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL-KEAKLL-G-ETHIAA 120 (360)
T ss_dssp HHHHHHHHHHHHHHHT--CC-TTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHH-HHHHTT-S-EEEEEE
T ss_pred HHHHHHHHHHHHHHhC--CC-CCceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHHH-HHHHHh-C-CeEEee
Confidence 3344444444444444 22 36799999999 99999999999865 56777777777543 334554 9 999999
Q ss_pred cCCCCCcccCHHHHHH-HHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 173 CDSSNDFKVTMEALEA-AYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~-~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
++++.+ .+|++++++ ++. +++|+|++++|+||||.+++ ++. +++|++||+||+|..+ .. +
T Consensus 121 ~~~~~~-~~d~~~l~~~~i~------~~~k~v~~~~~~nptG~~~~--~i~------~~~~~~li~D~a~~~~--~~--~ 181 (360)
T 1w23_A 121 STKANS-YQSIPDFSEFQLN------ENDAYLHITSNNTIYGTQYQ--NFP------EINHAPLIADMSSDIL--SR--P 181 (360)
T ss_dssp ECGGGT-SCSCCCGGGCCCC------TTEEEEEEESEETTTTEECS--SCC------CCCSSCEEEECTTTTT--SS--C
T ss_pred cccccC-cCCccchHhhccC------CCCCEEEEeCCCCCcceecc--ccc------ccCCceEEEechhhcC--CC--C
Confidence 875333 378888887 663 37999999999999999987 232 3799999999999753 21 1
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--------------hcCCCChHHHHH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--------------SFGLVSSQTQHL 317 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--------------~~~~~s~~~q~~ 317 (483)
.++. .. .++++|+||.+|++| +||++++ +.+.+.+.... .++..+...+.+
T Consensus 182 -~~~~---------~~--di~~~s~sK~~~~~G--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (360)
T 1w23_A 182 -LKVN---------QF--GMIYAGAQKNLGPSG--VTVVIVK-KDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYM 246 (360)
T ss_dssp -CCGG---------GC--SEEEEETTTTTSCTT--CEEEEEE-HHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHH
T ss_pred -cCcc---------cC--CEEEEEcccccCCCC--cEEEEEc-HHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHH
Confidence 1211 12 267899999999777 8999995 44433222111 113345555555
Q ss_pred HHHhcCChhHHHH--HHHHHHHHHHHHHHHHHHhhhcCC-c-eee-cC--CceEEEeeecCchhhccChHHHHHHHHHHH
Q 011570 318 IATMLSDDQFVEK--FIAESAKRIAERHKAFTWGLSQVG-I-GCL-KS--NAGLFLWMDLHHLLKEQTYEAEMALWRVII 390 (483)
Q Consensus 318 ~~~~l~~~~~~~~--~~~~~~~~l~~~~~~l~~~L~~~g-i-~~~-~~--~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll 390 (483)
+..++.. +.+ .+++.+++++++++++.+.|++++ + .+. .+ .+++++|++++... ...++.+.|.
T Consensus 247 ~~~al~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~ 317 (360)
T 1w23_A 247 LRNVLDW---IKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEE------LNQQFLAKAK 317 (360)
T ss_dssp HHHHHHH---HHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSHH------HHHHHHHHHH
T ss_pred HHHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCCc------cHHHHHHHHH
Confidence 5555532 122 356778888999999999998875 5 543 13 34669999987531 1235666655
Q ss_pred HhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 391 NEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 391 ~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
++||.+.+|..+ ++++||+++. .+++++++++++|++++++
T Consensus 318 -~~gi~~~~~~~~----~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 318 -EQGFVGLNGHRS----VGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp -HTTEESCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred -HCCeeeecCCCC----CCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 569999998754 4689999985 4899999999999988754
No 156
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.95 E-value=1.2e-27 Score=243.46 Aligned_cols=283 Identities=13% Similarity=0.080 Sum_probs=199.9
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc------CCCCeE-EEeCCCCcChHHHHhh---hc-
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA------DPGDAF-LVPTPYYPGFDRDLRW---RT- 164 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~------~~gd~V-lv~~P~y~~~~~~~~~---~~- 164 (483)
..++++.++++++ +++++|++|+|+++++..++.+++ ++||.| +++.++|+.+...+.. ..
T Consensus 73 ~~~l~~~la~~~g--------~~~~~v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~ 144 (416)
T 1qz9_A 73 SERLGNRLATLIG--------ARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQ 144 (416)
T ss_dssp HHHHHHHHHTTTT--------CCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcC--------CCcccEEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhc
Confidence 4566777776654 467899999999999998888876 899974 5555678765544322 13
Q ss_pred -CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 165 -GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 165 -G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
|.+++.++. +++|++++.+ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|+.
T Consensus 145 ~g~~~~~v~~---------~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~ 206 (416)
T 1qz9_A 145 QGYTLRLVDS---------PEELPQAIDQ------DTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSA 206 (416)
T ss_dssp SSCEEEEESS---------GGGHHHHCST------TEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTT
T ss_pred CCceEEEeCc---------HHHHHHHhCC------CceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccc
Confidence 888888874 5677777743 7899999999999999999 78889999999999999999973
Q ss_pred CccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceE-EEEEecChHHHHHHHHh------------------
Q 011570 244 TVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRV-GIIYSYNDQVVSCARKM------------------ 304 (483)
Q Consensus 244 ~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRi-G~li~~~~~l~~~~~~~------------------ 304 (483)
+. .. .++..+ +..+++.|+||.++ +|.++ ||++++++ +.+.+...
T Consensus 207 ---g~-~~-~~~~~~---------~~d~~~~s~~K~l~-~g~~~~g~l~~~~~-~~~~l~~~~~g~~g~~~~~~~~~~~~ 270 (416)
T 1qz9_A 207 ---GA-VP-VDLHQA---------GADYAIGCTYKYLN-GGPGSQAFVWVSPQ-LCDLVPQPLSGWFGHSRQFAMEPRYE 270 (416)
T ss_dssp ---TT-SC-CCHHHH---------TCSEEEECSSSTTC-CCTTCCCEEEECTT-TTTTSCCSCCCGGGBCTTSCCCSSCC
T ss_pred ---cC-cC-CChhhc---------CCCEEEecCcccCC-CCCCCeEEEEECHH-HHhccCCCccccCccccccCCCCccC
Confidence 32 21 233222 23477889999984 77888 99999654 32222111
Q ss_pred -------hhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC----CceeecCC----ceEEEeee
Q 011570 305 -------SSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV----GIGCLKSN----AGLFLWMD 369 (483)
Q Consensus 305 -------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----gi~~~~~~----~g~f~~~~ 369 (483)
...+..+...+.++.+++.... ...+++.+++++++++++.+.|.+. |+++..+. .+.++|++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~ 348 (416)
T 1qz9_A 271 PSNGIARYLCGTQPITSLAMVECGLDVFA--QTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFE 348 (416)
T ss_dssp BCSSGGGGCCSCCCHHHHHHHHHHHHHHT--TSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEE
T ss_pred CCcchHHhcCCCCCHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEe
Confidence 0123345555555544443210 1124566777788888899988876 78877663 24578998
Q ss_pred cCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEec--cCCHHHHHHHHHHHHHHHHHhh
Q 011570 370 LHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFA--NMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 370 l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~--~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
++. ..++.+.|. ++||.+... .++++||+++ ..+++++++++++|++++++..
T Consensus 349 ~~~---------~~~l~~~l~-~~gi~~~~~------~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~~ 403 (416)
T 1qz9_A 349 HPE---------GYAVIQALI-DRGVIGDYR------EPRIMRFGFTPLYTTFTEVWDAVQILGEILDRKT 403 (416)
T ss_dssp CTT---------HHHHHHHHH-TTTEECEEE------TTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred cCC---------HHHHHHHHH-hCCcEeccC------CCCeEEEeCcccCCCHHHHHHHHHHHHHHHhccc
Confidence 873 125677766 569987531 3578999997 3699999999999999988754
No 157
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.95 E-value=2.4e-27 Score=246.05 Aligned_cols=343 Identities=13% Similarity=0.133 Sum_probs=226.4
Q ss_pred CcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC----cE
Q 011570 47 GVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD----RI 122 (483)
Q Consensus 47 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~----~i 122 (483)
+.|+|..++|+.+ +.+.+++....... . .+ .+.....|+...+..++++.+.+++.+.+| ++++ +|
T Consensus 45 ~~i~L~a~e~~~~-~~V~eA~~~~l~~~-~-~~---g~p~~~~y~~~~~~~~le~~~~~~~a~~~g----~~~~~~~~~V 114 (483)
T 1rv3_A 45 VGLELIASENFAS-RAVLEALGSCLNNK-Y-SL---GYPGQRYYGGTEHIDELETLCQKRALQAYG----LDPQCWGVNV 114 (483)
T ss_dssp SSEECCTTCCCCC-HHHHHHHTSGGGTC-C-CC---EETTEESSSCCHHHHHHHHHHHHHHHHHTT----CCTTTEEEEC
T ss_pred cCeEEEcCCCCCC-HHHHHHHHHHHhcc-C-cc---cCCCccccCcchhHHHHHHHHHHHHHHHhC----CCcccCceEE
Confidence 4688888887654 44445443311100 0 00 001111243333456788888888888777 3443 48
Q ss_pred EEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH--------HhhhcC--cEEEEeecCCCCCcccCHHHHHHHHHH
Q 011570 123 VMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD--------LRWRTG--VQLVPVVCDSSNDFKVTMEALEAAYEK 192 (483)
Q Consensus 123 ~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~--------~~~~~G--~~~~~v~~~~~~~~~~d~~~l~~~i~~ 192 (483)
++++|+ +++..++.++++|||+|++++|+|+++... +... | .+++++++++ .++.+|+++|++++.+
T Consensus 115 ~~~sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~-G~~~~~v~~~~~~-~~~~iD~d~le~~i~~ 191 (483)
T 1rv3_A 115 QPYSGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISAT-SIFFESMAYKVNP-DTGYIDYDRLEENARL 191 (483)
T ss_dssp CCSSHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHH-HHHSEEEEECBCT-TTCSBCHHHHHHHHHH
T ss_pred EECCcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccc-cceEEEEECcccc-CCCcCCHHHHHHHHhh
Confidence 888888 888888899999999999999998876532 2222 4 5666665553 3588999999999974
Q ss_pred HHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc-CccCCCCCcchHHHhhhhccccCCCeEE
Q 011570 193 AQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA-TVFTKESSFVSIAEIIDQDIACNRNLIH 271 (483)
Q Consensus 193 ~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~-~~~~~~~~~~s~~~l~~~~~~~~~~~vi 271 (483)
. ++|+|++ +++||+ .+++ +++|.++|+++|++||+|++|.. +.+.+ ....++ . ...+
T Consensus 192 ~-----~tklIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~-~~~~p~----~-------~~di 249 (483)
T 1rv3_A 192 F-----HPKLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAG-VVPSPF----E-------HCHV 249 (483)
T ss_dssp H-----CCSEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHT-SSCCGG----G-------TCSE
T ss_pred c-----CCcEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccC-CCCCCC----C-------CCcE
Confidence 2 7899988 999998 8888 78889999999999999999863 22222 111111 1 2236
Q ss_pred EEecCccccCCCCceEEEEEecCh--------------HHHHHHHHhh-h--cCCCChHHHHHHHHhcCChhHHHHHHHH
Q 011570 272 IVYSLSKDMGFPGFRVGIIYSYND--------------QVVSCARKMS-S--FGLVSSQTQHLIATMLSDDQFVEKFIAE 334 (483)
Q Consensus 272 ~~~S~SK~~g~~GlRiG~li~~~~--------------~l~~~~~~~~-~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 334 (483)
++.|+||++ +|+|.||++++++ .+...+.... + .+..+.....+++.++.... ...+++
T Consensus 250 v~~s~~K~l--~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~--~~~~~~ 325 (483)
T 1rv3_A 250 VTTTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAM--TPEFKE 325 (483)
T ss_dssp EEEESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHT--SHHHHH
T ss_pred EEecCcccC--CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHh--ChhHHH
Confidence 789999987 6889999999654 2333333221 1 12233333444443432110 122466
Q ss_pred HHHHHHHHHHHHHHhhhcCCceeecCC-ceEEEeeecCch-hhccChHHHHHHHHHHHHhcCeEee----CCCCCCCCCC
Q 011570 335 SAKRIAERHKAFTWGLSQVGIGCLKSN-AGLFLWMDLHHL-LKEQTYEAEMALWRVIINEVKLNVS----PGSSFHCPNP 408 (483)
Q Consensus 335 ~~~~l~~~~~~l~~~L~~~gi~~~~~~-~g~f~~~~l~~~-~~~~~~~~~~~~~~~Ll~~~gV~v~----pg~~f~~~~~ 408 (483)
..+++.++++++.+.|.+.|+++..+. .++++|++++.. .+ ..++ ..+|++.||.+. ||..+. -.+
T Consensus 326 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~g~~------~~~~-~~~L~~~gI~v~~~~~pg~~~~-~~~ 397 (483)
T 1rv3_A 326 YQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTD------GGRA-EKVLEACSIACNKNTCPGDKSA-LRP 397 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEEGGGGTCC------HHHH-HHHHHHTTEECEEECCSSCSCT-TSC
T ss_pred HHHHHHHHHHHHHHHHHhcCCEeccCCCCCceEEEeccCCCCC------HHHH-HHHHHhCCcEEecCCCCCCCcC-CCC
Confidence 677788899999999998899887653 346888888642 11 1234 345567899999 887422 245
Q ss_pred CEEEEEeccC-C----HHHHHHHHHHHHHHHHH
Q 011570 409 GWFRVCFANM-D----DRTMEIALSRITSFMLK 436 (483)
Q Consensus 409 ~~iRis~~~~-~----~e~l~~~l~~L~~~l~~ 436 (483)
+++||+++.. + ++++++++++|+++++.
T Consensus 398 ~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 398 SGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp CEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 7899999752 5 89999999999999876
No 158
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.95 E-value=8.4e-28 Score=240.09 Aligned_cols=287 Identities=12% Similarity=0.080 Sum_probs=201.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCC-c-EEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcCh--HHHHhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPD-R-IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGF--DRDLRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~-~-i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~--~~~~~~~~G~~~~~v 171 (483)
..++++++.+.+.+.+| ++++ + +++|+|+++++..++.++++|||+|++..+.+... ...++.. | +++.+
T Consensus 47 ~~~~~~~~~~~la~~~g----~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~-g-~~~~v 120 (362)
T 2c0r_A 47 YEAVHNEAQARLLALLG----NPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLI-G-DTHVA 120 (362)
T ss_dssp HHHHHHHHHHHHHHHTT----CCSSEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHH-S-CEEEE
T ss_pred HHHHHHHHHHHHHHHhC----CCCCcEEEEECCCchHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHh-C-CeEEE
Confidence 45567777777776665 4453 6 56789999999999999999999999887764432 3455555 9 99999
Q ss_pred ecCCC--CCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC
Q 011570 172 VCDSS--NDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE 249 (483)
Q Consensus 172 ~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~ 249 (483)
+++.+ .++.+|.++++ +. +++++|++++|+||||.+++ ++++| +|+++|+|++|... .
T Consensus 121 ~~~~~~~~~~~~~~~~~~--i~------~~t~~v~~~~~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~---~- 180 (362)
T 2c0r_A 121 ASSEASNYMTLPKLQEIQ--LQ------DNAAYLHLTSNETIEGAQFK--AFPDT------GSVPLIGDMSSDIL---S- 180 (362)
T ss_dssp EECGGGTTCSCCCGGGCC--CC------TTEEEEEEESEETTTTEECS--SCCCC------TTSCEEEECTTTTT---S-
T ss_pred ecccccccccCCCHHHcc--cC------CCcCEEEEeCCcCccceecc--ccccc------CCCEEEEEChhhcc---C-
Confidence 88632 22334665543 32 37999999999999999754 25554 79999999999742 2
Q ss_pred CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH-------------h-hhcCCCChHHH
Q 011570 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK-------------M-SSFGLVSSQTQ 315 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~-------------~-~~~~~~s~~~q 315 (483)
.+ .+ +. .. .+++.|+||.+|++| +||++++++. .+.+.. . ...++++.+.|
T Consensus 181 ~~-~~---~~------~~--d~~~~s~~K~~g~~G--~G~l~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 245 (362)
T 2c0r_A 181 RP-FD---LN------QF--GLVYAGAQKNLGPSG--VTVVIVREDL-VAESPKHLPTMLRYDTYVKNNSLYNTPPSFGI 245 (362)
T ss_dssp SC-CC---GG------GC--SEEEEETTTTTCCSS--CEEEEEEGGG-SSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHH
T ss_pred Cc-cc---hh------HC--cEEEEeccccccCcC--cEEEEEcHHH-HhhccccCchHHhHHHHhhccCcCCCchHHHH
Confidence 11 12 21 12 367789999999888 9999995443 222211 0 12245677788
Q ss_pred HHHHHhcCChhHHHH--HHHHHHHHHHHHHHHHHHhhhcCC-c-eeec---CCceEEEeeecCchhhccChHHHHHHHHH
Q 011570 316 HLIATMLSDDQFVEK--FIAESAKRIAERHKAFTWGLSQVG-I-GCLK---SNAGLFLWMDLHHLLKEQTYEAEMALWRV 388 (483)
Q Consensus 316 ~~~~~~l~~~~~~~~--~~~~~~~~l~~~~~~l~~~L~~~g-i-~~~~---~~~g~f~~~~l~~~~~~~~~~~~~~~~~~ 388 (483)
.++..+++. +.+ .+++.+++++++++++.+.|.++| + ++.. ..++.++++.++...+ ..++++.
T Consensus 246 ~a~~~al~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 316 (362)
T 2c0r_A 246 YMVNEVLKW---IEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASEEL------EKEFVKA 316 (362)
T ss_dssp HHHHHHHHH---HHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCHHH------HHHHHHH
T ss_pred HHHHHHHHH---HHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCCcch------HHHHHHH
Confidence 887777643 222 467778889999999999999887 6 6642 1234567888874221 2366776
Q ss_pred HHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 389 IINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 389 Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
|. ++||.+.+|..| .+++|||++. .++++++.++++|++++++.
T Consensus 317 L~-~~gi~~~~g~~~----~~~iRis~~~~~~~e~i~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 317 SE-QEGFVGLKGHRS----VGGLRASIYNAVPYESCEALVQFMEHFKRSR 361 (362)
T ss_dssp HH-HTTEESCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HH-HCCCeeccCCCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 65 569999988765 3579999975 48999999999999987653
No 159
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.95 E-value=1.4e-26 Score=234.77 Aligned_cols=192 Identities=21% Similarity=0.277 Sum_probs=146.7
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH----hhhc
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----RWRT 164 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----~~~~ 164 (483)
+|+. .+..+|++++|++++ . .+.|++++| ++++..++. ++++||+|+++.|+|++....+ +. .
T Consensus 63 r~~~-p~~~~l~~~la~~~g--------~-~~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~-~ 129 (403)
T 3cog_A 63 RSGN-PTRNCLEKAVAALDG--------A-KYCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASE-F 129 (403)
T ss_dssp ---C-HHHHHHHHHHHHHHT--------C-SEEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGG-G
T ss_pred CCCC-chHHHHHHHHHHHhC--------C-CcEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHH-c
Confidence 3443 356899999999986 1 256777766 589999998 8999999999999998755543 34 4
Q ss_pred CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcC-cEEEEcccccc
Q 011570 165 GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKN-IHLVCDEIYAA 243 (483)
Q Consensus 165 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~-~~iI~Deay~~ 243 (483)
|++++.++.+ |++.+++++++ ++++|++++|+||||.+++ +++|+++|+++| +++|+||+|..
T Consensus 130 G~~v~~v~~~-------d~~~l~~~i~~------~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~ 193 (403)
T 3cog_A 130 GLKISFVDCS-------KIKLLEAAITP------ETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMS 193 (403)
T ss_dssp TCEEEEECTT-------SHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTC
T ss_pred CCEEEEECCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcc
Confidence 9999998864 78889888753 7899999999999999998 888999999999 99999999987
Q ss_pred CccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHhhh-c-CCCChHHHHHHHH
Q 011570 244 TVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKMSS-F-GLVSSQTQHLIAT 320 (483)
Q Consensus 244 ~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~~~-~-~~~s~~~q~~~~~ 320 (483)
..+.. +. ..+.+++++|+||.+|.+| +|+||++++++.+.+.+..... + ...+++.+.++..
T Consensus 194 ~~~~~--~~-------------~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~ 258 (403)
T 3cog_A 194 PYFQR--PL-------------ALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNR 258 (403)
T ss_dssp TTTCC--TT-------------TTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred cccCC--cc-------------ccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 54322 11 1245688999999998766 5799999966666666554333 3 2357777777777
Q ss_pred hcCC
Q 011570 321 MLSD 324 (483)
Q Consensus 321 ~l~~ 324 (483)
.+..
T Consensus 259 ~l~~ 262 (403)
T 3cog_A 259 GLKT 262 (403)
T ss_dssp HHTT
T ss_pred hhhH
Confidence 6665
No 160
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.95 E-value=4.9e-27 Score=240.54 Aligned_cols=345 Identities=11% Similarity=0.064 Sum_probs=206.7
Q ss_pred CCCCcccccchh--hhhc--HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 44 NPNGVIQMGLAE--NLLC--HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 44 ~~~~~i~l~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
....++|+..+. +.++ ++.+.+++.+... . .....|+. ....+|++.+++++. .+
T Consensus 53 ~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~----------~-~~~~~~~~-~~~~~l~~~la~~~~---------~~ 111 (434)
T 3l44_A 53 DGNKYIDYLAAYGPIITGHAHPHITKAITTAAE----------N-GVLYGTPT-ALEVKFAKMLKEAMP---------AL 111 (434)
T ss_dssp TCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHH----------H-CSCCSSCC-HHHHHHHHHHHHHCT---------TC
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHH----------h-CcCCCCCC-HHHHHHHHHHHHhCC---------CC
Confidence 345678888765 4443 4555554443100 0 01123432 334567777776642 57
Q ss_pred CcEEEeCChhHHHHHHHHHhcC--CCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCc--------c----cCHHH
Q 011570 120 DRIVMSGGATGAHETVAFCLAD--PGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDF--------K----VTMEA 185 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~--------~----~d~~~ 185 (483)
++|++|+|+++++..++.++.. +++.|++.+|+|+++...+....|.....+......++ . -|+++
T Consensus 112 ~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 191 (434)
T 3l44_A 112 DKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVET 191 (434)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHH
T ss_pred CEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHH
Confidence 8999999999999999987754 77999999999987655433322322211111110000 0 17899
Q ss_pred HHHHHHHHHhcCCceeEEEEeCC-CCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhcc
Q 011570 186 LEAAYEKAQESNIRIKGVLITNP-SNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDI 263 (483)
Q Consensus 186 l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~ 263 (483)
|++++++. +.++++ ++++| +|++|.+. +.+++++|.++|++||+++|+||+|.++ ..+ . ......+ .
T Consensus 192 le~~l~~~---~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g-~-~~~~~~~-~--- 260 (434)
T 3l44_A 192 LKEALDKW---GHEVAA-ILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFM-Y-GGAQDLL-G--- 260 (434)
T ss_dssp HHHHHHHH---GGGEEE-EEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSS-S-SCHHHHH-T---
T ss_pred HHHHHHhC---CCCEEE-EEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-ecc-c-cHHHHHc-C---
Confidence 99998753 124554 55555 55666655 8889999999999999999999999886 333 2 2222222 1
Q ss_pred ccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh-----hhcCCCChHHHHHHHHhcC---ChhHHHHHHHHH
Q 011570 264 ACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM-----SSFGLVSSQTQHLIATMLS---DDQFVEKFIAES 335 (483)
Q Consensus 264 ~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~-----~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~ 335 (483)
.... +.||||.+| +|+|+||+++ ++.+.+.+... ...+..+++++.++.++++ +.++ .++.
T Consensus 261 --~~~d---i~t~sK~~~-~G~~iG~~~~-~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~----~~~~ 329 (434)
T 3l44_A 261 --VTPD---LTALGKVIG-GGLPIGAYGG-KKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGL----YEKL 329 (434)
T ss_dssp --CCCS---EEEEEGGGG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTH----HHHH
T ss_pred --CCCC---eeehhhhhc-CCcCeeeEEE-cHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccH----HHHH
Confidence 1122 348999998 8999999988 56666554431 1124467888887766664 2222 2222
Q ss_pred HHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchh-h------ccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCC
Q 011570 336 AKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLL-K------EQTYEAEMALWRVIINEVKLNVSPGSSFHCPNP 408 (483)
Q Consensus 336 ~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~-~------~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~ 408 (483)
++.....++.+.+.+...++....+..|.|+++.+.... . .........++..|++ +||.++|+. .
T Consensus 330 ~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~------~ 402 (434)
T 3l44_A 330 DELGATLEKGILEQAAKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQ-EGVNLAPSK------Y 402 (434)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHH-TTEECCSST------T
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHH-CCeEEeecC------C
Confidence 222222223333333334543333334457777764211 0 0011122356777775 599999874 2
Q ss_pred CEEEEEeccCCHHHHHHHHHHHHHHHHHhhh
Q 011570 409 GWFRVCFANMDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 409 ~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
+++|+++. .+++++++++++|++++++.++
T Consensus 403 ~~~rl~~~-~t~e~i~~~l~~l~~~l~~~~~ 432 (434)
T 3l44_A 403 EAWFLTTE-HTKEDIEYTIEAVGRAFAALAD 432 (434)
T ss_dssp CCEECCTT-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEecc-cCHHHHHHHHHHHHHHHHHHHh
Confidence 45898764 6999999999999999987654
No 161
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.2e-27 Score=249.40 Aligned_cols=312 Identities=11% Similarity=0.092 Sum_probs=224.4
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC-----CC---CeEEEeCCCCcChHHHH
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD-----PG---DAFLVPTPYYPGFDRDL 160 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~-----~g---d~Vlv~~P~y~~~~~~~ 160 (483)
.|....|..++++.+++++.+.+| .+.+++++++|+|+++++..++.++.+ +| |.|+++.|+|..+...+
T Consensus 98 ~~~~~~~~~~l~~~~~~~la~~~g--~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~~ 175 (497)
T 3mc6_A 98 HPDVFPAVRKMESEVVSMVLRMFN--APSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAA 175 (497)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHTT--CCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHHH
T ss_pred CcccChHHHHHHHHHHHHHHHHhC--CCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHHH
Confidence 355555678999999999998877 333478999999999999999998865 56 89999999999999998
Q ss_pred hhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccc
Q 011570 161 RWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEI 240 (483)
Q Consensus 161 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Dea 240 (483)
... |.+++.+++++ .++.+|+++|++++.+ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++
T Consensus 176 ~~~-G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~livD~a 244 (497)
T 3mc6_A 176 YYF-GMKLRHVELDP-TTYQVDLGKVKKFINK------NTVLLVGSAPNFPHGIADD---IEGLGKIAQKYKLPLHVDSC 244 (497)
T ss_dssp HHS-CCEEEEECBCT-TTCSBCTTTTGGGCCS------SEEEEEEETTCTTTCCCCS---CTTTTTHHHHTTCCEEEETT
T ss_pred HHc-CCeEEEEecCc-ccCcCCHHHHHHHHhh------CCEEEEEECCCCCCCcCCC---HHHHHHHHHHhCCEEEEECc
Confidence 886 99999999875 3678999999998853 7899999999999999988 77888999999999999999
Q ss_pred cccCccC--CC---CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCC----
Q 011570 241 YAATVFT--KE---SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVS---- 311 (483)
Q Consensus 241 y~~~~~~--~~---~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s---- 311 (483)
|+.+... .. ...+.+. .. ..+..+++.|++|.++ +|.++||+++.++.+..........+..+
T Consensus 245 ~~~~~~~f~~~~~~~~~~~~~-~~------~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (497)
T 3mc6_A 245 LGSFIVSFMEKAGYKNLPLLD-FR------VPGVTSISCDTHKYGF-APKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGS 316 (497)
T ss_dssp TTHHHHGGGTTTTCCSCCCCS-TT------STTCCEEEEETTTTTC-CCSSCEEEECSSHHHHTTTSCCBTTCTTSCBCC
T ss_pred chhhhhhhhhhhcccCCcccc-cc------CCCCcEEEECchhhcC-CCCCceeEEecCHHHHhhhhcccccccCCCcCC
Confidence 9854321 10 0000111 10 1244577889999864 88899999996665443211111111000
Q ss_pred -----------hHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC--Cceeec-CCceEEEeeecCchhhcc
Q 011570 312 -----------SQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV--GIGCLK-SNAGLFLWMDLHHLLKEQ 377 (483)
Q Consensus 312 -----------~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--gi~~~~-~~~g~f~~~~l~~~~~~~ 377 (483)
..++.++...+... .+++..+++.++++++.+.|.+. |+++.. +.++ ++++..+. .
T Consensus 317 ~~~~g~~~~~~~~a~~aal~~l~~~-----~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~-~v~~~~~~-~--- 386 (497)
T 3mc6_A 317 PTLAGSRPGAIVVGCWATMVNMGEN-----GYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYS-VISFSSKT-L--- 386 (497)
T ss_dssp SSSCSSCBHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSS-EEEEECTT-T---
T ss_pred cCcccCCcchhHHHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCee-EEEEeCCC-C---
Confidence 22344444444322 24556667778888999999984 888774 5555 55555542 1
Q ss_pred ChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhhc
Q 011570 378 TYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 378 ~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
+..++.+.|.+ +||.+.++.. +..+|+++...+++++++++++|++++++..+.
T Consensus 387 ---~~~~l~~~L~~-~Gi~v~~~~~-----~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~~~ 440 (497)
T 3mc6_A 387 ---NIHELSDRLSK-KGWHFNALQK-----PVALHMAFTRLSAHVVDEICDILRTTVQELKSE 440 (497)
T ss_dssp ---THHHHHHHHHT-TTCBCEECCS-----SCCEEEECCTTTTCTHHHHHHHHHHHHHHHTCC
T ss_pred ---CHHHHHHHHHh-CCEEEecCCC-----CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 12366777764 5999887643 235899998669999999999999999887644
No 162
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.95 E-value=3e-27 Score=233.15 Aligned_cols=277 Identities=16% Similarity=0.155 Sum_probs=187.3
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhh---hcCcEEEEeecC
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRW---RTGVQLVPVVCD 174 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~---~~G~~~~~v~~~ 174 (483)
+|++.+|++++ .+ +.+++++| ++++..++.+++++||+|+++.|+|+.+...+.. ..|.+++.++.
T Consensus 2 ~l~~~la~~~g--------~~-~~i~~~sG-~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~- 70 (331)
T 1pff_A 2 ALEGKIAKLEH--------AE-ACAATASG-MGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM- 70 (331)
T ss_dssp HHHHHHHHHHT--------CS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-
T ss_pred hHHHHHHHHhC--------CC-eEEEeCCh-HHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-
Confidence 68999999986 23 55555555 8999999999999999999999999988776532 24999988875
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhh-cCcEEEEccccccCccCCCCCcc
Q 011570 175 SSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINE-KNIHLVCDEIYAATVFTKESSFV 253 (483)
Q Consensus 175 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~-~~~~iI~Deay~~~~~~~~~~~~ 253 (483)
.|++.+++++++ ++++|++++|+||||.+++ +++|.++|++ +|+++|+||+|....+..
T Consensus 71 ------~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~~----- 130 (331)
T 1pff_A 71 ------AVPGNIEKHLKP------NTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTN----- 130 (331)
T ss_dssp ------TSTTHHHHTCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCC-----
T ss_pred ------CCHHHHHHhhcC------CCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccCC-----
Confidence 367888887753 7899999999999999998 8889999999 999999999997543321
Q ss_pred hHHHhhhhccccCCCeEEEEecCccccCCCCce-EEEEEecChHHHHHHHHhhhc---CCCChHHHHHHHHhcCChhHHH
Q 011570 254 SIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFR-VGIIYSYNDQVVSCARKMSSF---GLVSSQTQHLIATMLSDDQFVE 329 (483)
Q Consensus 254 s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlR-iG~li~~~~~l~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~ 329 (483)
++ . .++++++.|+||.+|.+|.| +||++++++.+.+.+...... +..+++.+.++...+...
T Consensus 131 ~~-~---------~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---- 196 (331)
T 1pff_A 131 PL-D---------LGVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTL---- 196 (331)
T ss_dssp GG-G---------GTCSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHH----
T ss_pred hh-h---------cCCcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchH----
Confidence 11 1 25678899999999999999 899999543666666554433 235666666654444321
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhc--------------C-CceeecC---CceEEEeeecCchhhccChHHHHHHHHHHHH
Q 011570 330 KFIAESAKRIAERHKAFTWGLSQ--------------V-GIGCLKS---NAGLFLWMDLHHLLKEQTYEAEMALWRVIIN 391 (483)
Q Consensus 330 ~~~~~~~~~l~~~~~~l~~~L~~--------------~-gi~~~~~---~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~ 391 (483)
....+...++.+.+.+.|++ . |+++..+ ..+.++.+.++. ..+ ...+++
T Consensus 197 ---~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~-~~~~l~ 263 (331)
T 1pff_A 197 ---DMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDG---------LEK-AKKVLD 263 (331)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS---------HHH-HHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC---------HHH-HHHHHH
Confidence 11122222233333333322 1 2333221 123466777752 113 344566
Q ss_pred hcCeEeeCCCCCC------------------------CCCCCEEEEEecc-CCHHHHHHHHHHHHH
Q 011570 392 EVKLNVSPGSSFH------------------------CPNPGWFRVCFAN-MDDRTMEIALSRITS 432 (483)
Q Consensus 392 ~~gV~v~pg~~f~------------------------~~~~~~iRis~~~-~~~e~l~~~l~~L~~ 432 (483)
++||.+++.+.-+ ...++++||+++. .++++++.+++.|++
T Consensus 264 ~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~ 329 (331)
T 1pff_A 264 NCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDL 329 (331)
T ss_dssp TCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred hCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 7899876653111 0125799999986 367777777777764
No 163
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.95 E-value=3.2e-26 Score=232.70 Aligned_cols=288 Identities=15% Similarity=0.168 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhh---hcCcEEEEeecC
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRW---RTGVQLVPVVCD 174 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~---~~G~~~~~v~~~ 174 (483)
+.++++++.+.+..| .+++++++|+++++..++.+++++||+|+++.|+|+.+...+.. ..|.+++.++.+
T Consensus 81 p~~~~l~~~la~~~g------~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~ 154 (414)
T 3ndn_A 81 PTVSVFEERLRLIEG------APAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD 154 (414)
T ss_dssp HHHHHHHHHHHHHHT------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred hHHHHHHHHHHHHHC------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC
Confidence 344444444444433 36889999999999999999999999999999999988776643 139999999864
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcch
Q 011570 175 SSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVS 254 (483)
Q Consensus 175 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s 254 (483)
|+++|++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|....+.. +
T Consensus 155 -------d~~~l~~ai~~------~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~--~--- 213 (414)
T 3ndn_A 155 -------DLSQWERALSV------PTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQQ--G--- 213 (414)
T ss_dssp -------CHHHHHHHTSS------CCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC--C---
T ss_pred -------CHHHHHHhcCC------CCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccCC--c---
Confidence 78999988853 7899999999999999988 7888999999999999999997432221 1
Q ss_pred HHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHH-hhhcC-CCChHHHHHHHHhcCChhHHHHH
Q 011570 255 IAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARK-MSSFG-LVSSQTQHLIATMLSDDQFVEKF 331 (483)
Q Consensus 255 ~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~-~~~~~-~~s~~~q~~~~~~l~~~~~~~~~ 331 (483)
+ . ...++++.|+||.+|.+| +|+||++++++.+.+.+.. ...++ ..++....++...+. .
T Consensus 214 ~-~---------~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~---~---- 276 (414)
T 3ndn_A 214 F-P---------LGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGLE---T---- 276 (414)
T ss_dssp G-G---------GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGG---G----
T ss_pred h-h---------cCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH---H----
Confidence 1 1 134578899999999778 8999999955544434443 22333 234444333333332 2
Q ss_pred HHHHHHHHHHHHHHHHHhhhcC-Cce-eecCC----------------ceEEEeeecCchhhccChHHHHHHHHHHHHhc
Q 011570 332 IAESAKRIAERHKAFTWGLSQV-GIG-CLKSN----------------AGLFLWMDLHHLLKEQTYEAEMALWRVIINEV 393 (483)
Q Consensus 332 ~~~~~~~l~~~~~~l~~~L~~~-gi~-~~~~~----------------~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~ 393 (483)
+..+.++..++++.+.+.|++. ++. +..|. .|.++|+.++.... ........|...+. ..
T Consensus 277 l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~-~~~~~~~~~~~~l~-~~ 354 (414)
T 3ndn_A 277 LAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPED-VAKQRAFEVLDKMR-LI 354 (414)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGG-GHHHHHHHHHHHCS-SS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCcc-ccHHHHHHHHHhCc-cc
Confidence 3344455567778888888776 443 22221 46689999974200 00112224444443 45
Q ss_pred CeEeeCCCCCCC---------------------CCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 394 KLNVSPGSSFHC---------------------PNPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 394 gV~v~pg~~f~~---------------------~~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
++.+..|..+.. ..++++|||++. |+.+.+++.|++++
T Consensus 355 ~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~---e~~~dli~dl~~al 413 (414)
T 3ndn_A 355 DISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL---EDTDDLIADIDRAL 413 (414)
T ss_dssp EECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred eEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHhh
Confidence 777777765421 235789999984 44566666666654
No 164
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.95 E-value=5.4e-26 Score=233.86 Aligned_cols=308 Identities=13% Similarity=0.069 Sum_probs=200.5
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC--------CCCeEEEeCCCCcChHH-HHhhh---
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD--------PGDAFLVPTPYYPGFDR-DLRWR--- 163 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~--------~gd~Vlv~~P~y~~~~~-~~~~~--- 163 (483)
..++++++++.+.+.++ .++++|++|+|+++++..++.++.. +||.|++.+|+|+++.. .+...
T Consensus 91 ~~~~~~~l~~~la~~~~----~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~ 166 (449)
T 3a8u_X 91 GHPLSFQLAEKITDLTP----GNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVN 166 (449)
T ss_dssp CCHHHHHHHHHHHTTSS----TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCH
T ss_pred CCHHHHHHHHHHHHhCC----CCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCCh
Confidence 34566666666665433 4678999999999999999988764 67999999999987643 33321
Q ss_pred ----------cCcEEEEeecCCCCCc-ccC--------HHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcC-CCCHHHHH
Q 011570 164 ----------TGVQLVPVVCDSSNDF-KVT--------MEALEAAYEKAQESNIRIKGVLITNP-SNPLGT-FLDRETLK 222 (483)
Q Consensus 164 ----------~G~~~~~v~~~~~~~~-~~d--------~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~-~~~~~~l~ 222 (483)
.|+..+++|.....+| .+| ++.|++++++.. ..+++ +++++| +||||. +.+.++++
T Consensus 167 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~--~~~~~-~vi~~p~~~~tG~~~~~~~~l~ 243 (449)
T 3a8u_X 167 GNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHD--ASNIA-AVFVEPLAGSAGVLVPPEGYLK 243 (449)
T ss_dssp HHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHC--GGGEE-EEEECSSBTTTTCBCCCTTHHH
T ss_pred hhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcC--CCCEE-EEEEcCccCCCCCccCCHHHHH
Confidence 0234444432111111 245 899999887421 02455 455667 478997 56799999
Q ss_pred HHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHH
Q 011570 223 DIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCA 301 (483)
Q Consensus 223 ~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~ 301 (483)
+|.++|++||++||+||+|.++.+.+ .. ..+... . ....++ ||||.++ +| +|+||++++ +.+.+.+
T Consensus 244 ~l~~l~~~~~~~li~Dev~~~~g~~g-~~-~~~~~~-~-----~~~di~---s~sK~l~-~G~~~~G~~~~~-~~~~~~l 310 (449)
T 3a8u_X 244 RNREICNQHNILLVFDEVITGFGRTG-SM-FGADSF-G-----VTPDLM---CIAKQVT-NGAIPMGAVIAS-TEIYQTF 310 (449)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTS-SS-SHHHHH-T-----CCCSEE---EECGGGG-TTSSCCEEEEEE-HHHHHHH
T ss_pred HHHHHHHHhCCEEEEeccccCccccC-cc-hhhhhc-C-----CCCCEE---EEccccc-CCCCceEEEEEC-HHHHHHh
Confidence 99999999999999999997643333 21 222222 1 112322 8999998 68 999999994 5666665
Q ss_pred HHhh-----------hcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-cee--ecCCceEEEe
Q 011570 302 RKMS-----------SFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVG-IGC--LKSNAGLFLW 367 (483)
Q Consensus 302 ~~~~-----------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~--~~~~~g~f~~ 367 (483)
.... ..+..+++++.++.++++.. ++ ....++++++++++.+.|.+++ +.. ..+..|+|+|
T Consensus 311 ~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~ 385 (449)
T 3a8u_X 311 MNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLL---QK--ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGA 385 (449)
T ss_dssp HTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHH---HH--TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEE
T ss_pred hccCcccccccccccCCCcccHHHHHHHHHHHHHH---Hh--cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEE
Confidence 4421 11335777777777666421 11 1234556666677777776642 221 1223457899
Q ss_pred eecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 368 MDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 368 ~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
++++....... ....++...|++ +||.++|+ + +++||+++. .+++++++++++|++++++.
T Consensus 386 i~~~~~~~~~~-~~~~~~~~~l~~-~Gv~v~~~------g-~~iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 386 IQIAPRDGDAI-VRPFEAGMALWK-AGFYVRFG------G-DTLQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp EEECCBTTBSS-HHHHHHHHHHHH-HTEECEEE------T-TEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEecCccccc-ccHHHHHHHHHH-CCcEEecC------C-CEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 99975321110 012257777775 59999986 1 689999753 69999999999999988653
No 165
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.95 E-value=1.2e-26 Score=238.84 Aligned_cols=348 Identities=10% Similarity=0.037 Sum_probs=209.7
Q ss_pred CCCcccccchh--hhhc--HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 45 PNGVIQMGLAE--NLLC--HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 45 ~~~~i~l~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
...+||+..+. +.++ ++.+.+++.+.. .....|....+..++++++++++.+..+ ...+
T Consensus 43 g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~-------------~~~~~~~~~~~~~~~~~~la~~l~~~~~----~~~~ 105 (448)
T 3dod_A 43 GKEYYDGFSSVWLNVHGHRKKELDDAIKKQL-------------GKIAHSTLLGMTNVPATQLAETLIDISP----KKLT 105 (448)
T ss_dssp SCEEEETTHHHHTCSSCBSCHHHHHHHHHHH-------------TTCSCCCCSSSEEHHHHHHHHHHHHHSC----TTEE
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHHHH-------------HhccCccccccCCHHHHHHHHHHHHhCC----CCCC
Confidence 35678888763 3332 344555444311 1112233344567788888888887643 3568
Q ss_pred cEEEeCChhHHHHHHHHHhcC----CC----CeEEEeCCCCcChHHHHhhhcCc------------EEEEeecCCCCCcc
Q 011570 121 RIVMSGGATGAHETVAFCLAD----PG----DAFLVPTPYYPGFDRDLRWRTGV------------QLVPVVCDSSNDFK 180 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~----~g----d~Vlv~~P~y~~~~~~~~~~~G~------------~~~~v~~~~~~~~~ 180 (483)
+|++|+|+++++..++.++.. +| |.|++.+|+|+++........|. .+..++.+ ..|.
T Consensus 106 ~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 183 (448)
T 3dod_A 106 RVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP--YVYR 183 (448)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCC--CCTT
T ss_pred EEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC--cccc
Confidence 999999999999999988865 44 99999999998765443332121 12233332 1222
Q ss_pred c-----------CHHHHHHHHHHHHhcCCceeEEEEeCCC-CCCcC-CCCHHHHHHHHHHHhhcCcEEEEccccccCccC
Q 011570 181 V-----------TMEALEAAYEKAQESNIRIKGVLITNPS-NPLGT-FLDRETLKDIVSFINEKNIHLVCDEIYAATVFT 247 (483)
Q Consensus 181 ~-----------d~~~l~~~i~~~~~~~~~~~~i~l~~P~-NPtG~-~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~ 247 (483)
. |+++|+++++.. ..++++|++..++ |++|. +.+.+.+++|.++|++||+++|+||+|.++.+.
T Consensus 184 ~~~~~~~~~~~~d~~~le~~l~~~---~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~ 260 (448)
T 3dod_A 184 SESGDPDECRDQCLRELAQLLEEH---HEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRT 260 (448)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHH---GGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT
T ss_pred CCccchhhhhHHHHHHHHHHHHhC---CCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcc
Confidence 2 488899888732 1256666665556 88885 568888999999999999999999999875444
Q ss_pred CCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHH-------hh--hcCCCChHHHHH
Q 011570 248 KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARK-------MS--SFGLVSSQTQHL 317 (483)
Q Consensus 248 ~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~-------~~--~~~~~s~~~q~~ 317 (483)
+ ..+ ..... . .... +.||||+++ +| +|+||+++ ++.+.+.+.. .. ..+..+++++.+
T Consensus 261 g-~~~-a~~~~-~-----~~~d---i~t~sK~l~-~G~~~ig~v~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa 327 (448)
T 3dod_A 261 G-KMF-ACEHE-N-----VQPD---LMAAGKGIT-GGYLPIAVTFA-TEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAV 327 (448)
T ss_dssp S-SSS-GGGGG-T-----CCCS---EEEECGGGG-TTSSCCEEEEE-EHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHH
T ss_pred c-chh-hhhhc-C-----CCCC---EEEeccccc-CCcCceEEEEE-CHHHHHHhhhccccCCcccccCCCCcCHHHHHH
Confidence 4 322 22111 1 1122 337899998 69 59999999 5666665533 11 123467888888
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-ceeecCCceEEEeeecCchhhccC-----hHHHHHHHHHHHH
Q 011570 318 IATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVG-IGCLKSNAGLFLWMDLHHLLKEQT-----YEAEMALWRVIIN 391 (483)
Q Consensus 318 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~~~~~~g~f~~~~l~~~~~~~~-----~~~~~~~~~~Ll~ 391 (483)
+.++|+.... +++.++.++..+..++.+.+ +..++ +....+. |.|+|+.++....... .....+++..+++
T Consensus 328 a~aal~~~~~-~~~~~~~~~~~~~~~~~l~~-l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 404 (448)
T 3dod_A 328 ALENLALFES-ENIVEQVAEKSKKLHFLLQD-LHALPHVGDIRQL-GFMCGAELVRSKETKEPYPADRRIGYKVSLKMRE 404 (448)
T ss_dssp HHHHHHHHHH-TTHHHHHHHHHHHHHHHHHH-HTTSTTEEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHhc-ccHHHHHHHHHHHHHHHHHH-HhcCCCeEEEEee-eEEEEEEEccCcccccccchhhHHHHHHHHHHHH
Confidence 8777753211 12233333333444444555 54443 3333333 5688888865321100 0002367777775
Q ss_pred hcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 392 EVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 392 ~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+||.+.|+ .+++||+++. .+++++++++++|++++++..
T Consensus 405 -~Gv~~~~~-------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 444 (448)
T 3dod_A 405 -LGMLTRPL-------GDVIAFLPPLASTAEELSEMVAIMKQAIHEVT 444 (448)
T ss_dssp -TTEECCEE-------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCcEEecc-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 49999886 2689997654 599999999999999998653
No 166
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.95 E-value=2.7e-26 Score=236.25 Aligned_cols=355 Identities=10% Similarity=0.037 Sum_probs=214.3
Q ss_pred CCCCcccccch--hhhhc--HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 44 NPNGVIQMGLA--ENLLC--HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 44 ~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
+...+||+..+ .+.++ ++.+.+++.+.. .....|....+..+++.++++++.+..+. ...
T Consensus 59 ~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~-------------~~~~~~~~~~~~~~~~~~la~~l~~~~~~---~~~ 122 (451)
T 3oks_A 59 DGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQV-------------GDFTHTCFMVTPYEGYVAVCEQLNRLTPV---RGD 122 (451)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHH-------------TTCSCCTTTTSCCHHHHHHHHHHHHHSSC---CSS
T ss_pred CCCEEEEcCCCccccccCCCCHHHHHHHHHHH-------------HhcccccCCccCCHHHHHHHHHHHHhCCc---CCC
Confidence 34567899877 44443 344555444311 11223444445677888888888766431 135
Q ss_pred CcEEEeCChhHHHHHHHHHhcC--CCCeEEEeCCCCcChHHHHhhhcCc-------------EEEEeecCCC--C-----
Q 011570 120 DRIVMSGGATGAHETVAFCLAD--PGDAFLVPTPYYPGFDRDLRWRTGV-------------QLVPVVCDSS--N----- 177 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~~G~-------------~~~~v~~~~~--~----- 177 (483)
++|++|+|+++++..++..+.. .++.|++.+++|+++........|. .+..++.+.. +
T Consensus 123 ~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 202 (451)
T 3oks_A 123 KRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGK 202 (451)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCT
T ss_pred CEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccccccc
Confidence 7999999999999999977653 4589999999998766554333111 3444444310 0
Q ss_pred -C---cccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcC--CCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 178 -D---FKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGT--FLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 178 -~---~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~--~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
. -..+++.+++.+++.. +++..++++++|.|++|- +.+.+.+++|.++|++||+++|+||+|.++.+.+ .
T Consensus 203 ~~~~~~~~~~~~~~~~l~~~~--~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g-~- 278 (451)
T 3oks_A 203 ELATDGELAAKRAITVIDKQI--GADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTG-A- 278 (451)
T ss_dssp TTTTCHHHHHHHHHHHHHHHT--CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS-S-
T ss_pred ccchhhHHHHHHHHHHHHhhc--CCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccc-c-
Confidence 0 0012444545554321 123456677788776663 4477789999999999999999999998754443 2
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--hcCCCChHHHHHHHHhcCChhHHH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--SFGLVSSQTQHLIATMLSDDQFVE 329 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~ 329 (483)
+...... . ....+ .||||++| +|+|+||+++ ++.+.+.+.... ..+..++++|.++.++|+.... .
T Consensus 279 ~~~~~~~-~-----~~pdi---~t~sK~l~-~G~~iG~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~ 346 (451)
T 3oks_A 279 MFACEHE-G-----IDPDL---IVTAKGIA-GGLPLSAVTG-RAEIMDSPHVSGLGGTYGGNPIACAAALATIETIES-E 346 (451)
T ss_dssp SSGGGGG-T-----CCCSE---EEECGGGG-TTSSCEEEEE-EHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHH-T
T ss_pred chhhhhc-C-----CCCCe---eeehhhhh-CCcceEEEEE-CHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhh-h
Confidence 2222222 1 11222 28999998 5999999999 566655443222 2245788888888777753110 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCC-ceeecCCceEEEeeecCchh-hccChHHHHHHHHHHHHhcCeEeeCCCCCCCCC
Q 011570 330 KFIAESAKRIAERHKAFTWGLSQVG-IGCLKSNAGLFLWMDLHHLL-KEQTYEAEMALWRVIINEVKLNVSPGSSFHCPN 407 (483)
Q Consensus 330 ~~~~~~~~~l~~~~~~l~~~L~~~g-i~~~~~~~g~f~~~~l~~~~-~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~ 407 (483)
++.++.++.....++.+.+.+.+.+ +....+. |.|+|+++.... ..........++..+++ +||.+.|+..|
T Consensus 347 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~---- 420 (451)
T 3oks_A 347 GLVARAQQIEKIMKDRLGRLQAEDDRIGDVRGR-GAMIAMELVKAGTTEPDADLTKALCAGAHA-AGVIVLSCGTY---- 420 (451)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEEEBSTTSCCBCHHHHHHHHHHHHH-TTEECEEECTT----
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEe-eEEEEEEEecCccCCCCHHHHHHHHHHHHh-CCcEEecCCCC----
Confidence 1222222222333333444444443 3333444 468888874310 00111223467777775 59999997654
Q ss_pred CCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 408 PGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 408 ~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
.+++||+++. .+++++++++++|++++++
T Consensus 421 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 421 GNVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp SCEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 3589999876 4999999999999998863
No 167
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.95 E-value=1.6e-26 Score=234.20 Aligned_cols=304 Identities=14% Similarity=0.110 Sum_probs=204.0
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---Hhhh-cCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWR-TGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~-~G~~~~~v 171 (483)
..++++++.+.+.+.+| .+++.|++++| ++++..++.+++++||.|+++.|+|+.+... +... .+.+++.+
T Consensus 67 ~~~l~~~~r~~la~~~g----~~~~~i~~~sG-t~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 141 (405)
T 2vi8_A 67 VDIVEELARERAKQLFG----AEHANVQPHSG-AQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAY 141 (405)
T ss_dssp HHHHHHHHHHHHHHHHT----CSEEECCCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEE
T ss_pred HHHHHHHHHHHHHHHhC----CCceEEEecCc-HHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEec
Confidence 34555433333333333 34445556676 9999999999999999999999999887531 1122 13478888
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
++++ .++.+|++.|++++.+. ++++|++ +|+|+ |...+ +++|.++|+++|+++|+||+|....+..+..
T Consensus 142 ~~~~-~~~~~d~~~l~~~i~~~-----~~~~v~~-~~~~~-~~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~ 210 (405)
T 2vi8_A 142 GVDP-ETHVIDYDDVREKARLH-----RPKLIVA-AAAAY-PRIID---FAKFREIADEVGAYLMVDMAHIAGLVAAGLH 210 (405)
T ss_dssp CBCT-TTCSBCHHHHHHHHHHH-----CCSEEEE-CCSSC-CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSS
T ss_pred cccc-ccCCcCHHHHHHHHHhc-----CCeEEEE-eCCCC-CccCC---HHHHHHHHHHcCCEEEEEccccccccccCcC
Confidence 7753 35789999999998752 5677766 56554 45555 7889999999999999999998432221011
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccC-CCCceEEEEEecChHHHHHHHHhhhc---CCCChHHHHHHHHhcCChhH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMG-FPGFRVGIIYSYNDQVVSCARKMSSF---GLVSSQTQHLIATMLSDDQF 327 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~li~~~~~l~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~ 327 (483)
..+ + . ...++++|+||.++ .+| ||++++ +.+.+.+...... +..+.....++.+++...
T Consensus 211 ~~~---~-~-------~~di~~~s~sK~~~g~~g---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~-- 273 (405)
T 2vi8_A 211 PNP---V-P-------YAHFVTTTTHKTLRGPRG---GMILCQ-EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEA-- 273 (405)
T ss_dssp CCS---T-T-------TCSEEEEESSSTTCCCSC---EEEEEC-HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--
T ss_pred CCc---c-c-------cCCEEEEeccccCCCCCC---eEEEEc-HHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHH--
Confidence 111 1 1 12277899999997 566 999995 6666666554322 212333333333444321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCceeecC-CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCC----
Q 011570 328 VEKFIAESAKRIAERHKAFTWGLSQVGIGCLKS-NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSS---- 402 (483)
Q Consensus 328 ~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~-~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~---- 402 (483)
...++++.+++++++++++.+.|++.|+++..+ .+++++|++++... . +..++.+.| .++||.+++|..
T Consensus 274 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~l-~~~gi~v~~g~~~~~~ 347 (405)
T 2vi8_A 274 LQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQ--L---TGKTAEKVL-DEVGITVNKNTIPYDP 347 (405)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGT--C---CHHHHHHHH-HHHTEECEEECCTTCS
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCCceEEEEEccCCC--C---CHHHHHHHH-HHcCceeccCcCcccc
Confidence 113467778888999999999999889888765 45789999987421 0 122556655 467999999863
Q ss_pred CCCCCCCEEEEEecc-----CCHHHHHHHHHHHHHHHHHhh
Q 011570 403 FHCPNPGWFRVCFAN-----MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 403 f~~~~~~~iRis~~~-----~~~e~l~~~l~~L~~~l~~~~ 438 (483)
++...++++||+++. .+++++++++++|++++++..
T Consensus 348 ~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 348 ESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp SCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred CCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence 332345789999984 579999999999999987654
No 168
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.95 E-value=1.6e-26 Score=238.15 Aligned_cols=301 Identities=12% Similarity=0.036 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC-------CC-CeEEEeCCCCcChHHHHhhhcC----
Q 011570 98 EFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD-------PG-DAFLVPTPYYPGFDRDLRWRTG---- 165 (483)
Q Consensus 98 ~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~P~y~~~~~~~~~~~G---- 165 (483)
+...++++.+.+.++ ...++|++|+|+++++..++.++.. +| +.|++.+|+|.++........+
T Consensus 118 ~~~~~L~e~la~~~~----~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~ 193 (457)
T 3tfu_A 118 EPAARLAKLLVDITP----AGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGG 193 (457)
T ss_dssp HHHHHHHHHHHHHSS----TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC--
T ss_pred HHHHHHHHHHHHhCC----CCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCccc
Confidence 344444444444432 4567999999999999999988764 55 5899999999775543332211
Q ss_pred ---------cEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeC-CCCCCcCCC-CHHHHHHHHHHHhhcCcE
Q 011570 166 ---------VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITN-PSNPLGTFL-DRETLKDIVSFINEKNIH 234 (483)
Q Consensus 166 ---------~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~-P~NPtG~~~-~~~~l~~i~~~a~~~~~~ 234 (483)
..+..++.+.......|+++|++++++. ..++++|++.. ++||+|.++ +.+.+++|.++|++||++
T Consensus 194 ~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~---~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gil 270 (457)
T 3tfu_A 194 MHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQH---AGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVL 270 (457)
T ss_dssp --------CCCCEEECCCCSSCCHHHHHHHHHHHHHH---GGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCE
T ss_pred ccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhC---CCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 1222333322221224789999998753 23677777777 799999876 778899999999999999
Q ss_pred EEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh--h-----h
Q 011570 235 LVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM--S-----S 306 (483)
Q Consensus 235 iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~--~-----~ 306 (483)
+|+||+|.++...+ . +.....+ . ...+++ ||||.++ .| +|+||+++ ++.+.+.+... . .
T Consensus 271 lI~DEv~~g~gr~G-~-~~a~~~~-~-----~~pdii---t~sK~l~-gG~~~lG~v~~-~~~i~~~~~~~~~~~~~~~~ 337 (457)
T 3tfu_A 271 LIFDEIATGFGRTG-A-LFAADHA-G-----VSPDIM---CVGKALT-GGYLSLAATLC-TADVAHTISAGAAGALMHGP 337 (457)
T ss_dssp EEEECTTTTTTTTS-S-SSTHHHH-T-----CCCSEE---EECGGGG-TTSSCCEEEEE-EHHHHHHHHHSSSCSCCCCC
T ss_pred EEEEcCccCCcccc-c-hhHhHhc-C-----CCceEE---EEChhhh-CCCcceEEEEE-cHHHHHHhhccCCCceeEec
Confidence 99999998854443 2 2232222 1 123333 9999987 56 79999999 56666666411 1 1
Q ss_pred cCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC----CceeecCCceEEEeeecCchhhccChHHH
Q 011570 307 FGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV----GIGCLKSNAGLFLWMDLHHLLKEQTYEAE 382 (483)
Q Consensus 307 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----gi~~~~~~~g~f~~~~l~~~~~~~~~~~~ 382 (483)
.+..++++++++.+.|+... + +...++++++.+++.+.|.++ ++....+.| +|++++++...+ .
T Consensus 338 t~~~n~~a~aaa~aaL~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G-~~~~i~l~~~~~------~ 405 (457)
T 3tfu_A 338 TFMANPLACAVSVASVELLL---G--QDWRTRITELAAGLTAGLDTARALPAVTDVRVCG-AIGVIECDRPVD------L 405 (457)
T ss_dssp TTTTCHHHHHHHHHHHHHHH---T--SCHHHHHHHHHHHHHHHHGGGGGSTTEEEEEECS-SCEEEEESSCCC------H
T ss_pred CCCcCHHHHHHHHHHHHHHh---h--hHHHHHHHHHHHHHHHHHHHHhcCCCeeeeecCC-eEEEEEECCccc------H
Confidence 23467888887776664210 0 122333444555555555543 344444554 688888875321 2
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 383 MALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 383 ~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
.++++.|+++ ||.++|+ .+++||+++. .+++++++++++|++++++..
T Consensus 406 ~~~~~~l~~~-Gv~v~~~-------~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 406 AVATPAALDR-GVWLRPF-------RNLVYAMPPYICTPAEITQITSAMVEVARLVG 454 (457)
T ss_dssp HHHHHHHHHT-TEECCCB-------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHC-CeEEEec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3677888765 9999873 2589999765 499999999999999987653
No 169
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.95 E-value=3.3e-26 Score=234.77 Aligned_cols=288 Identities=13% Similarity=0.116 Sum_probs=197.8
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc---------CCC-CeEEEeCCCCcChHH-HHhhhc
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA---------DPG-DAFLVPTPYYPGFDR-DLRWRT 164 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~---------~~g-d~Vlv~~P~y~~~~~-~~~~~~ 164 (483)
..++++.++++++ .++|++++|+++++..++.++. .+| |.|++.+|+|++... .+.. .
T Consensus 120 ~~~l~~~la~~~g----------~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~-~ 188 (439)
T 2oat_A 120 LGEYEEYITKLFN----------YHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISS-S 188 (439)
T ss_dssp HHHHHHHHHHHHT----------CSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTT-C
T ss_pred HHHHHHHHHHhcC----------CCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhc-C
Confidence 5677777777653 4799999999999999998864 467 899999999976543 3333 2
Q ss_pred C------------cEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcC-CCCHHHHHHHHHHHhh
Q 011570 165 G------------VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNP-SNPLGT-FLDRETLKDIVSFINE 230 (483)
Q Consensus 165 G------------~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~-~~~~~~l~~i~~~a~~ 230 (483)
| .+++.+|. .|+++|+++++. .++++|+ ++| +|+||. +++.+.+++|.++|++
T Consensus 189 g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~~-----~~~~~vi-~ep~~~~~G~~~~~~~~l~~l~~l~~~ 255 (439)
T 2oat_A 189 TDPTSYDGFGPFMPGFDIIPY-------NDLPALERALQD-----PNVAAFM-VEPIQGEAGVVVPDPGYLMGVRELCTR 255 (439)
T ss_dssp CCHHHHTTSCSCCTTEEEECS-------SCHHHHHHHTTS-----TTEEEEE-ECSSBTTTTSBCCCTTHHHHHHHHHHH
T ss_pred CChhcccCCCCCCCCeEEeCC-------CCHHHHHHHhCC-----CCEEEEE-EECCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 4 35555553 278999988841 2566555 556 577896 5689999999999999
Q ss_pred cCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh--hhc
Q 011570 231 KNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM--SSF 307 (483)
Q Consensus 231 ~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~--~~~ 307 (483)
||+++|+||+|.++.+.+ .. .... ... ....+ + ||||.+| +| +|+||++++ +.+.+.+... ...
T Consensus 256 ~gillI~DEv~~g~g~~g-~~-~~~~-~~~-----~~~Di-~--t~sK~l~-~G~~~~G~v~~~-~~~~~~l~~~~~~~t 322 (439)
T 2oat_A 256 HQVLFIADEIQTGLARTG-RW-LAVD-YEN-----VRPDI-V--LLGKALS-GGLYPVSAVLCD-DDIMLTIKPGEHGST 322 (439)
T ss_dssp TTCEEEEECTTTTTTTTS-SS-SGGG-GGT-----CCCSE-E--EECGGGG-TTSSCCEEEEEC-HHHHTTSCTTSSCCS
T ss_pred cCCEEEEeccccCCccCC-cc-hhHH-HhC-----CCCcE-E--Eeccccc-CCCCCeEEEEEC-HHHHhccCCCCcccC
Confidence 999999999997643333 22 1211 111 11222 2 9999998 79 999999994 5555544321 112
Q ss_pred CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcee--ecCCceEEEeeecCchhhccChHHHHHH
Q 011570 308 GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGC--LKSNAGLFLWMDLHHLLKEQTYEAEMAL 385 (483)
Q Consensus 308 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~--~~~~~g~f~~~~l~~~~~~~~~~~~~~~ 385 (483)
+..+++++.++.++++.. .+ ....++++++++++.+.|+++++++ ..+..|.|+|++++.... ....++
T Consensus 323 ~~~~~~~~aaa~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~g~~~~v~l~~~~~----~~~~~l 393 (439)
T 2oat_A 323 YGGNPLGCRVAIAALEVL---EE--ENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKD----WDAWKV 393 (439)
T ss_dssp STTCHHHHHHHHHHHHHH---HH--TTHHHHHHHHHHHHHHHHTTSCTTTEEEEEEETTEEEEEECCCSS----CCHHHH
T ss_pred CCcCHHHHHHHHHHHHHH---hh--hhHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeEEEEEEecCcc----HHHHHH
Confidence 346777777776666432 11 2345667778888888898775442 122345688898875210 012367
Q ss_pred HHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 386 WRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 386 ~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
+..|++ +||.+.|+ +++++|++++. .+++++++++++|++++++
T Consensus 394 ~~~l~~-~Gv~v~~~------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 394 CLRLRD-NGLLAKPT------HGDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp HHHHHH-TTEECCBS------SSSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHH-CCeEEecC------CCCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 788775 59999874 25689998865 5999999999999998753
No 170
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.95 E-value=1.8e-26 Score=231.37 Aligned_cols=322 Identities=13% Similarity=0.120 Sum_probs=219.1
Q ss_pred CcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeC
Q 011570 47 GVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSG 126 (483)
Q Consensus 47 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~ 126 (483)
++++++.+.+.+.. +.+.+.+.. ....|.+..+..+++++++++++ .+++++++
T Consensus 7 ~~~~l~~~~~~~~~--~~~~~~~~~--------------~~~~~~~~~~~~~l~~~la~~~~----------~~~~~~~~ 60 (374)
T 3uwc_A 7 PYSYLERQFADIEP--YLNDLREFI--------------KTADFTLGAELEKFEKRFAALHN----------APHAIGVG 60 (374)
T ss_dssp CSCCHHHHTSSCHH--HHHHHHHHH--------------HHTCCSSCHHHHHHHHHHHHHTT----------CSEEEEES
T ss_pred eeeccccCCCCchH--HHHHHHHHH--------------HcCCcccChhHHHHHHHHHHHhC----------CCcEEEeC
Confidence 46888888877665 445444310 11246666778999999999976 23889999
Q ss_pred ChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 011570 127 GATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLI 205 (483)
Q Consensus 127 G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l 205 (483)
|+++++..++.++ +++||+|+++.|+|+.+...++.. |.+++.++.+ .++.+|++.+++++.+ ++++|+
T Consensus 61 ~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~-g~~~~~~~~~--~~~~~d~~~l~~~~~~------~~~~v~- 130 (374)
T 3uwc_A 61 TGTDALAMSFKMLNIGAGDEVITCANTFIASVGAIVQA-GATPVLVDSE--NGYVIDPEKIEAAITD------KTKAIM- 130 (374)
T ss_dssp CHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHHHHT-TCEEEEECBC--TTSSBCGGGTGGGCCT------TEEEEC-
T ss_pred CHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHHHc-CCEEEEEecC--CCCCcCHHHHHHhCCC------CceEEE-
Confidence 9999999999999 999999999999999999888876 9999999987 3678999999988753 677666
Q ss_pred eCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc-cCCCCCcchHHHhhhhccccCCCeEEEEecCc--cccCC
Q 011570 206 TNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV-FTKESSFVSIAEIIDQDIACNRNLIHIVYSLS--KDMGF 282 (483)
Q Consensus 206 ~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~-~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~S--K~~g~ 282 (483)
|+||||.+.+ +++|.++|+++|+++|+||+|.... +.. .. .. . -..+++.|+| |.+|.
T Consensus 131 --~~n~~G~~~~---~~~i~~~~~~~~~~li~D~~~~~g~~~~~-~~------~~------~-~~d~~~~s~~~~K~l~~ 191 (374)
T 3uwc_A 131 --PVHYTGNIAD---MPALAKIAKKHNLHIVEDACQTILGRIND-KF------VG------S-WGQFACFSLHPLKNLNV 191 (374)
T ss_dssp --CBCGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETT-EE------TT------S-SSSEEEEECSSSSSSCC
T ss_pred --EeCCcCCcCC---HHHHHHHHHHcCCEEEEeCCCccCceeCC-ee------cc------c-cccEEEEeCCCCCcCCc
Confidence 9999999988 7888889999999999999998532 221 11 10 0 1245677866 99974
Q ss_pred CCceEEEEEecChHHHHHHHHhhhc--------------CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHH
Q 011570 283 PGFRVGIIYSYNDQVVSCARKMSSF--------------GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTW 348 (483)
Q Consensus 283 ~GlRiG~li~~~~~l~~~~~~~~~~--------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~ 348 (483)
+|. .|+++++++.+.+.+...... ...+.+...+....+ . . +++..++.++..+++.+
T Consensus 192 ~g~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~--~-~----~~~~~~~~~~~~~~l~~ 263 (374)
T 3uwc_A 192 WSD-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLM--N-Q----LETITEKRRGIAHLYDQ 263 (374)
T ss_dssp SSC-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHG--G-G----HHHHHHHHHHHHHHHHH
T ss_pred cce-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHH--H-H----HHHHHHHHHHHHHHHHH
Confidence 465 899998777777666554321 011222222222222 1 1 23344455666777888
Q ss_pred hhhcCC--ceeec-CCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC-----------C--------
Q 011570 349 GLSQVG--IGCLK-SNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC-----------P-------- 406 (483)
Q Consensus 349 ~L~~~g--i~~~~-~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~-----------~-------- 406 (483)
.|.+.+ +.+.. +.++...|..++.... +..++.+.|. ++||.++++..... .
T Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~L~-~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (374)
T 3uwc_A 264 SFVDLSEFIDVPVRREGVYHVFHIYVLRVK-----YRDQLFQYLK-DNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAE 337 (374)
T ss_dssp HTGGGTTTEECCCCCTTEECCCSSEEEEET-----THHHHHHHHH-HTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHH
T ss_pred HhccCCCeEEeccCCCCCceeeEEEEEEcC-----CHHHHHHHHH-HCCCccccCCCCccccChhhhhcCCccCCCccHH
Confidence 888764 65532 2333233222211000 1235666666 45999998851100 0
Q ss_pred --CCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 407 --NPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 407 --~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
..+.+||++.. .+++++++++++|++++++.
T Consensus 338 ~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~~ 371 (374)
T 3uwc_A 338 KHGEAVITLPAHPYLTEEEINYIIKKVREFYLEK 371 (374)
T ss_dssp HHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 01579999966 59999999999999988653
No 171
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.95 E-value=7.2e-27 Score=235.89 Aligned_cols=324 Identities=14% Similarity=0.172 Sum_probs=212.9
Q ss_pred CCcccccchhhhhcHHHHHHHHhcCCCCccccccccccccccccCC-CCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE
Q 011570 46 NGVIQMGLAENLLCHELVEDWLMNNPKASICSAEGLNEFKGIAIFQ-DYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM 124 (483)
Q Consensus 46 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i 124 (483)
.++++++.+.+.++.... +.+.+. + ....|+ +..+..+||+++|++++ .+++++
T Consensus 22 ~~~~~l~~~~p~~~~~~~-~a~~~~-------------~-~~~~~~~~~~~~~~l~~~la~~~~----------~~~~i~ 76 (391)
T 3dr4_A 22 SDLPRISVAAPRLDGNER-DYVLEC-------------M-DTTWISSVGRFIVEFEKAFADYCG----------VKHAIA 76 (391)
T ss_dssp ------CCCCCCCCSSHH-HHHHHH-------------H-HHTCCSSCSHHHHHHHHHHHHHHT----------CSEEEE
T ss_pred CCCceeccCCCCCCHHHH-HHHHHH-------------H-HcCCccCCChHHHHHHHHHHHHhC----------CCcEEE
Confidence 467888888776653332 222220 0 012355 55678999999999986 238888
Q ss_pred eCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 011570 125 SGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGV 203 (483)
Q Consensus 125 t~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i 203 (483)
++|+++++..++.++ +++||+|+++.|+|+.+...+... |.+++.+++++ .+|.+|++.|++++.+ ++++|
T Consensus 77 ~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~~~~------~~~~v 148 (391)
T 3dr4_A 77 CNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVTYC-GATPVLVDNDP-RTFNLDAAKLEALITP------RTKAI 148 (391)
T ss_dssp ESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHHHHHHHHT-TCEEEEECBCT-TTCSBCGGGSGGGCCT------TEEEE
T ss_pred eCCHHHHHHHHHHHcCCCCcCEEEECCCchHHHHHHHHHC-CCEEEEEecCc-cccCcCHHHHHHhcCC------CceEE
Confidence 999999999999999 999999999999999999988876 99999999874 3578999999988753 67777
Q ss_pred EEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc-cCCCCCcchHHHhhhhccccCCCeEEEEecCc--ccc
Q 011570 204 LITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV-FTKESSFVSIAEIIDQDIACNRNLIHIVYSLS--KDM 280 (483)
Q Consensus 204 ~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~-~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~S--K~~ 280 (483)
+ |+||||.+.+ +++|+++|+++|++||+||+|+... +.+ . ... ... .+.+.||| |.+
T Consensus 149 ~---~~n~tG~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~-~---~~~---------~~~-di~~~S~s~~K~l 208 (391)
T 3dr4_A 149 M---PVHLYGQICD---MDPILEVARRHNLLVIEDAAEAVGATYRG-K---KSG---------SLG-DCATFSFFGNAII 208 (391)
T ss_dssp C---CBCGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETT-E---ETT---------SSS-SEEEEECBTTSSS
T ss_pred E---EECCCCChhh---HHHHHHHHHHcCCEEEEECcccccceECC-e---eec---------ccC-CEEEEECCCCCcC
Confidence 6 6789999988 7888899999999999999997532 222 1 100 011 25667877 665
Q ss_pred CCCCceEEEEEecChHHHHHHHHhhhcCCC--------------ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHH
Q 011570 281 GFPGFRVGIIYSYNDQVVSCARKMSSFGLV--------------SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAF 346 (483)
Q Consensus 281 g~~GlRiG~li~~~~~l~~~~~~~~~~~~~--------------s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l 346 (483)
+|.+.|+++++++.+.+.+......+.. ......++..+... . .+++..++.++..+++
T Consensus 209 --~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~-~----~~~~~~~~~~~~~~~l 281 (391)
T 3dr4_A 209 --TTGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQL-E----RVDEHLAARERVVGWY 281 (391)
T ss_dssp --CCBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHH-H----THHHHHHHHHHHHHHH
T ss_pred --CcCCeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHH-H----HHHHHHHHHHHHHHHH
Confidence 5567899999777777666554322111 11111222222111 1 1334445556667778
Q ss_pred HHhhhcCCceeecC------Cce-EEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCC---CC--------C--
Q 011570 347 TWGLSQVGIGCLKS------NAG-LFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSF---HC--------P-- 406 (483)
Q Consensus 347 ~~~L~~~gi~~~~~------~~g-~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f---~~--------~-- 406 (483)
.+.|.+.|+.+..+ ..+ +.+++.++.... ....++.+.|.+ +||.+++|... .+ .
T Consensus 282 ~~~L~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~l~~~L~~-~GI~v~~~~~p~~~~~~~~~~~~~~~~ 356 (391)
T 3dr4_A 282 EQKLARLGNRVTKPHVALTGRHVFWMYTVRLGEGLS----TTRDQVIKDLDA-LGIESRPVFHPMHIMPPYAHLATDDLK 356 (391)
T ss_dssp HHHHGGGTTSEECCCCCTTSCCCCSSEEEEECSSCS----SCHHHHHHHHHH-TTCCCEECCCCGGGSGGGGGGCCTTCH
T ss_pred HHHhhcCCccccCcCCCCCCcceeEEEEEEECCccc----hhHHHHHHHHHH-CCCceeecCCccccChhhhhcCcCCCh
Confidence 88888777776554 122 234666654100 012366777765 59999987521 00 0
Q ss_pred -----CCCEEEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 407 -----NPGWFRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 407 -----~~~~iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
..+.+||++.. .++++++.++++|++++
T Consensus 357 ~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 357 IAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp HHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 12469999965 59999999999998653
No 172
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.95 E-value=5.9e-27 Score=239.66 Aligned_cols=340 Identities=14% Similarity=0.079 Sum_probs=208.9
Q ss_pred CCCCcccccchh--hhhc--HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 44 NPNGVIQMGLAE--NLLC--HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 44 ~~~~~i~l~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
....+||++.+. +.++ ++.+.+++.+... .. ....|+ .....+|++.+++++. .+
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~----------~~-~~~~~~-~~~~~~l~~~la~~~~---------~~ 109 (429)
T 3k28_A 51 DGNEYIDYVLSWGPLIHGHANDRVVEALKAVAE----------RG-TSFGAP-TEIENKLAKLVIERVP---------SI 109 (429)
T ss_dssp TCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHH----------HC-SCCSSC-CHHHHHHHHHHHHHST---------TC
T ss_pred CCCEEEECCCChhhcccCCCCHHHHHHHHHHHh----------hC-cCcCCC-CHHHHHHHHHHHHhCC---------CC
Confidence 345688888775 4443 4555555543110 00 112243 3345677777777653 47
Q ss_pred CcEEEeCChhHHHHHHHHHhcC--CCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcc------------cCHHH
Q 011570 120 DRIVMSGGATGAHETVAFCLAD--PGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFK------------VTMEA 185 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~------------~d~~~ 185 (483)
++|++|+|+++++..++..+.. +++.|++.+|+|+++........|..+..++.+...++. -|+++
T Consensus 110 ~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 189 (429)
T 3k28_A 110 EIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLES 189 (429)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHH
T ss_pred CEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHH
Confidence 8999999999999999987754 678999999999765543322223222111111111110 17899
Q ss_pred HHHHHHHHHhcCCceeEEEEeCC-CCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhcc
Q 011570 186 LEAAYEKAQESNIRIKGVLITNP-SNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDI 263 (483)
Q Consensus 186 l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~ 263 (483)
|++++++. ..++++ ++++| +|++|.+. +.+++++|.++|++||+++|+||+|.++ ..+ . ... .....
T Consensus 190 le~~l~~~---~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g-~-~~~-~~~~~--- 258 (429)
T 3k28_A 190 VKYAFEQF---GDDIAC-VIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVA-Y-NCG-QGYYG--- 258 (429)
T ss_dssp HHHHHHHH---GGGEEE-EEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSS-T-THH-HHHHT---
T ss_pred HHHHHHhC---CCCEEE-EEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccC-c-chH-HHHhC---
Confidence 99988753 124554 55555 55566555 6888999999999999999999999876 333 2 122 22221
Q ss_pred ccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh-----hhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHH
Q 011570 264 ACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM-----SSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKR 338 (483)
Q Consensus 264 ~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~-----~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 338 (483)
.... +.||||++| +|+|+||+++ ++.+.+.+... ...+..+++++.++.++++... ++..+.
T Consensus 259 --~~~d---i~t~sK~~~-~G~~iG~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~------~~~~~~ 325 (429)
T 3k28_A 259 --VTPD---LTCLGKVIG-GGLPVGAYGG-KAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT------PESYVE 325 (429)
T ss_dssp --CCCS---EEEECGGGG-TTSCCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC------HHHHHH
T ss_pred --CCCc---eehhhhhhc-CCCCeEEEEE-cHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH------HHHHHH
Confidence 1122 347999998 6999999999 56665554331 1124567888888877776432 223344
Q ss_pred HHHHHHHHHHhhhc----CCc-eeecCCceEEEeeecCchhh-------ccChHHHHHHHHHHHHhcCeEeeCCCCCCCC
Q 011570 339 IAERHKAFTWGLSQ----VGI-GCLKSNAGLFLWMDLHHLLK-------EQTYEAEMALWRVIINEVKLNVSPGSSFHCP 406 (483)
Q Consensus 339 l~~~~~~l~~~L~~----~gi-~~~~~~~g~f~~~~l~~~~~-------~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~ 406 (483)
++++++++.+.|.+ .++ ...++.| .|+++.+..... ........++++.+++ +||.++|+.
T Consensus 326 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~----- 398 (429)
T 3k28_A 326 FERKAEMLEAGLRKAAEKHGIPHHINRAG-SMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVE-QGVFLPPSQ----- 398 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCEEEEET-TEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHH-TTEECCSST-----
T ss_pred HHHHHHHHHHHHHHHHhhCCCCEEEEeec-cEEEEEEecCCcccccccccccHHHHHHHHHHHHH-CCeEEecCC-----
Confidence 45555555555544 333 2334444 577777643110 0111123467777774 599999873
Q ss_pred CCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 407 NPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 407 ~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
.+++|+++. .+++++++++++|++++++.
T Consensus 399 -~~~~r~~~~-~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 399 -FEGLFLSTV-HSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp -TSCBCCCTT-CCHHHHHHHHHHHHHHHHTC
T ss_pred -CCCEEEECC-CCHHHHHHHHHHHHHHHHHH
Confidence 346888775 69999999999999998754
No 173
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.95 E-value=4e-26 Score=235.09 Aligned_cols=318 Identities=9% Similarity=-0.004 Sum_probs=219.7
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCc-----EEEeCChhHHHHHHHHHhcC--------CC-----CeEEEeC
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDR-----IVMSGGATGAHETVAFCLAD--------PG-----DAFLVPT 150 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~-----i~it~G~~~al~~~~~~l~~--------~g-----d~Vlv~~ 150 (483)
.|....+..++++++.+++.+.+| ++.++ +++|+|+++++..++.++.+ +| +.|+++.
T Consensus 72 ~~~~~~~~~~l~~~~~~~la~l~g----~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~ 147 (452)
T 2dgk_A 72 DKEEYPQSAAIDLRCVNMVADLWH----APAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP 147 (452)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHTT----CCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS
T ss_pred ChhhChhHHHHHHHHHHHHHHHhC----CCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC
Confidence 344555778899999999988877 44444 99999999999999888754 55 5899999
Q ss_pred CCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhh
Q 011570 151 PYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINE 230 (483)
Q Consensus 151 P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~ 230 (483)
+|..+...+... |++++.+|+++ ++|.+|+++|+++|.+ ++++|++++|+||||.+.+ +++|.++|++
T Consensus 148 -~h~~~~~~~~~~-G~~v~~v~~~~-~~~~~d~~~l~~~i~~------~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~ 215 (452)
T 2dgk_A 148 -VQICWHKFARYW-DVELREIPMRP-GQLFMDPKRMIEACDE------NTIGVVPTFGVTYTGNYEF---PQPLHDALDK 215 (452)
T ss_dssp -CCHHHHHHHHHT-TCEEEECCCBT-TBCSCCHHHHHHHCCT------TEEEEECBBSCTTTCBBCC---HHHHHHHHHH
T ss_pred -CcHHHHHHHHHc-CceEEEEecCC-CCCeECHHHHHHHHhh------CCEEEEEEcCCcCCcccCC---HHHHHHHHHH
Confidence 999998888876 99999999875 3688999999999864 7899999999999999988 7777888888
Q ss_pred c------CcEEEEccccccCcc--CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHH-HHHH
Q 011570 231 K------NIHLVCDEIYAATVF--TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQV-VSCA 301 (483)
Q Consensus 231 ~------~~~iI~Deay~~~~~--~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l-~~~~ 301 (483)
+ |+++++|++|+.+.. .. ........ .....++..|++| ++++|+++||+++.++.+ .+.+
T Consensus 216 ~~~~~~~~~~l~vD~a~~~~~~~~~~-~~~~~~~~--------~~~~d~~~~~~hK-~~~~~~~~G~~~~~~~~~~~~~~ 285 (452)
T 2dgk_A 216 FQADTGIDIDMHIDAASGGFLAPFVA-PDIVWDFR--------LPRVKSISASGHK-FGLAPLGCGWVIWRDEEALPQEL 285 (452)
T ss_dssp HHHHHCCCCCEEEECTTGGGTHHHHC-TTCCCSTT--------STTEEEEEEETTT-TTCCCSSCEEEEESSGGGSCGGG
T ss_pred HhhccCCCCcEEEEcccHHHHHHhhC-ccchhhcC--------CCCCcEEEECccc-ccCCCCCeEEEEEcCHHHHHHHh
Confidence 4 999999999987532 11 11110001 1134556778999 557999999999965432 2222
Q ss_pred HHhhhcC-----------CC---ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecC----Cc
Q 011570 302 RKMSSFG-----------LV---SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKS----NA 362 (483)
Q Consensus 302 ~~~~~~~-----------~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~----~~ 362 (483)
.....+. .. ..+.+.++...+. .+.+++..+++.++++++.+.|++. ++++..+ ..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~ 360 (452)
T 2dgk_A 286 VFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG-----REGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEG 360 (452)
T ss_dssp CEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTB
T ss_pred ccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCC
Confidence 1111111 00 2233444433332 2235666777888899999999988 5887753 23
Q ss_pred eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCC-CCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhhc
Q 011570 363 GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFH-CPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 363 g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~-~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
..++.++++.... ... ...++.+.|.+ .||.++.+.... ..+.+++|++++. .++++++.+++.|+++++..++.
T Consensus 361 ~~~v~f~~~~~~~-~~~-~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~~~~ 437 (452)
T 2dgk_A 361 IPAVCFKLKDGED-PGY-TLYDLSERLRL-RGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDH 437 (452)
T ss_dssp SSEEEEEECTTCC-CSC-CHHHHHHHHHH-TTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred eEEEEEEecCccc-ccC-CHHHHHHHHHh-cCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3466667753210 000 11367777775 598655322111 1134589999976 48899999999999998877654
No 174
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.94 E-value=2.7e-26 Score=236.01 Aligned_cols=306 Identities=16% Similarity=0.094 Sum_probs=200.6
Q ss_pred CcHHHH--HHHH-HHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChH-HH--Hhhh-cCcE
Q 011570 95 GLPEFR--NAVA-KFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFD-RD--LRWR-TGVQ 167 (483)
Q Consensus 95 g~~~Lr--~~ia-~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~-~~--~~~~-~G~~ 167 (483)
|...++ ++++ +++.+.+| .+. ..++++|+++++..++.+++++||+|+++.|+|..+. .. +... .+..
T Consensus 85 g~~~~~~~e~~a~~~la~~~g----~~~-~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~ 159 (447)
T 3h7f_A 85 GCEHVDVVENLARDRAKALFG----AEF-ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYE 159 (447)
T ss_dssp CCHHHHHHHHHHHHHHHHHHT----CSE-EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSE
T ss_pred ccHHHHHHHHHHHHHHHHHcC----CCc-eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeE
Confidence 444444 5555 66666655 232 2332777889999999999999999999999987732 11 1111 1556
Q ss_pred EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc-Ccc
Q 011570 168 LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA-TVF 246 (483)
Q Consensus 168 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~-~~~ 246 (483)
+++++++++ ++.+|++++++++.+. ++++|++++|+||++. ++++|.++|+++|+++|+||+|.. +.+
T Consensus 160 ~~~~~~~~~-~~~~d~~~l~~~i~~~-----~~~~i~~~~~~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~ 228 (447)
T 3h7f_A 160 NGFYGVDPA-THLIDMDAVRATALEF-----RPKVIIAGWSAYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVA 228 (447)
T ss_dssp EEEECCCTT-TCSCCHHHHHHHHHHH-----CCSEEEEECSSCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHH
T ss_pred EEEcCcCcc-cCCcCHHHHHHHHHhc-----CCeEEEEcCCCCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhc
Confidence 777776643 5789999999999653 6788999999999987 488999999999999999999743 233
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh-hc--CCCChHHHHHHHHhcC
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS-SF--GLVSSQTQHLIATMLS 323 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~-~~--~~~s~~~q~~~~~~l~ 323 (483)
.+ .. .+.. . ...+++.|+||++ +|+|.||++++ +.+.+.+.... .+ +......+.+++.++.
T Consensus 229 ~g-~~-~~~~---~-------~~di~~~s~sK~l--~G~~gG~i~~~-~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~ 293 (447)
T 3h7f_A 229 AG-LH-PSPV---P-------HADVVSTTVHKTL--GGGRSGLIVGK-QQYAKAINSAVFPGQQGGPLMHVIAGKAVALK 293 (447)
T ss_dssp TT-SS-CCST---T-------TCSEEEEESSGGG--CCCSCEEEEEC-GGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHH
T ss_pred CC-CC-CCCC---C-------CCcEEEecCCcCC--CCCCeEEEEEC-HHHHHHHhhhcCCcccCCccHHHHHHHHHHHH
Confidence 33 21 1211 1 1236789999987 58899999994 45555554432 22 2222232333333322
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-----Cceeec-CCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEe
Q 011570 324 DDQFVEKFIAESAKRIAERHKAFTWGLSQV-----GIGCLK-SNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNV 397 (483)
Q Consensus 324 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-----gi~~~~-~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v 397 (483)
.. .....++..+++.++++++.+.|.+. |+++.. +.+++++|+++..... ..+.+..+++++||.+
T Consensus 294 ~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~GI~v 365 (447)
T 3h7f_A 294 IA--ATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPL------DGQAAEDLLHEVGITV 365 (447)
T ss_dssp HT--TSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSC------CHHHHHHHHHHTTEEC
T ss_pred Hh--hCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCC------CHHHHHHHHHHCCeEE
Confidence 10 01124666777888889999999887 888764 3456788888864211 1144556677789999
Q ss_pred e----CCCCCCCCCCCEEEEEecc-----CCHHHHHHHHHHHHHHHHHhhh
Q 011570 398 S----PGSSFHCPNPGWFRVCFAN-----MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 398 ~----pg~~f~~~~~~~iRis~~~-----~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
. |+..+.+..++++||++.. .++++++++++.|++++++..+
T Consensus 366 ~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~~~~ 416 (447)
T 3h7f_A 366 NRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALATGSS 416 (447)
T ss_dssp BC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHSGGG
T ss_pred ecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhccCc
Confidence 8 6643333345689999843 4689999999999999877643
No 175
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.94 E-value=2.6e-25 Score=224.74 Aligned_cols=281 Identities=16% Similarity=0.150 Sum_probs=197.7
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH----hhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----RWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----~~~~G~~~~~v 171 (483)
..+|++.+|++++ .+++++++|+++++..++.+++++||+|+++.|+|+.+...+ +.. |.+++.+
T Consensus 68 ~~~l~~~la~~~g----------~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~-g~~~~~v 136 (392)
T 3qhx_A 68 RTALEAALAAVED----------AAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGW-NVEYTPV 136 (392)
T ss_dssp HHHHHHHHHHHTT----------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGG-TCEEEEE
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhc-CcEEEEe
Confidence 4678888888765 247899999999999999999999999999999999877666 444 9999998
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+.+ |++.+++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|... +.. .+
T Consensus 137 ~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~-~~~-~~ 198 (392)
T 3qhx_A 137 ALA-------DLDAVRAAIRP------TTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASP-ALQ-QP 198 (392)
T ss_dssp CTT-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCT-TTC-CG
T ss_pred CCC-------CHHHHHHhhCC------CCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCccc-ccC-Ch
Confidence 864 78999998863 7999999999999999988 888999999999999999999754 222 11
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHhhh-c-CCCChHHHHHHHHhcCChhHH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKMSS-F-GLVSSQTQHLIATMLSDDQFV 328 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~~~-~-~~~s~~~q~~~~~~l~~~~~~ 328 (483)
. . ...++++.|+||.+|.+| +|+||++++++.+.+.+..... . ...++..+.++...+...
T Consensus 199 ---~-~---------~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l--- 262 (392)
T 3qhx_A 199 ---L-S---------LGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKTL--- 262 (392)
T ss_dssp ---G-G---------GTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTH---
T ss_pred ---H-H---------hCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHH---
Confidence 1 1 144578999999999777 8999999976666666554433 2 345666666666666542
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcC-Cce-eecCC----------------ceEEEeeecCchhhccChHHHHHHHHHHH
Q 011570 329 EKFIAESAKRIAERHKAFTWGLSQV-GIG-CLKSN----------------AGLFLWMDLHHLLKEQTYEAEMALWRVII 390 (483)
Q Consensus 329 ~~~~~~~~~~l~~~~~~l~~~L~~~-gi~-~~~~~----------------~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll 390 (483)
..+.++..++.+.+.+.|+++ ++. +..|. .|..+++.++... .....+...+
T Consensus 263 ----~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~-----~~~~~~~~~l- 332 (392)
T 3qhx_A 263 ----VLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR-----TAAEQLCAKT- 332 (392)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH-----HHHHHHHHHC-
T ss_pred ----HHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH-----HHHHHHHHhC-
Confidence 233444566667777777765 332 22111 2457888887521 1122344333
Q ss_pred HhcCeEeeCCCCCCC------------------CCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011570 391 NEVKLNVSPGSSFHC------------------PNPGWFRVCFANMDDRTMEIALSRITSFM 434 (483)
Q Consensus 391 ~~~gV~v~pg~~f~~------------------~~~~~iRis~~~~~~e~l~~~l~~L~~~l 434 (483)
+..++.+..|+.+.. ..++.||||++. ++.++.++.|.+++
T Consensus 333 ~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~---e~~~~~i~~l~~al 391 (392)
T 3qhx_A 333 NIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI---EDVADLLDDLKQAL 391 (392)
T ss_dssp SSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred CCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEecc---CCHHHHHHHHHHHh
Confidence 345777777765321 135689999984 34555555555544
No 176
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.94 E-value=2.5e-25 Score=225.31 Aligned_cols=279 Identities=18% Similarity=0.178 Sum_probs=190.7
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH----hhhcCcEEEE
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----RWRTGVQLVP 170 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----~~~~G~~~~~ 170 (483)
...++++.++++++ . + +.++++++++++..++.+++++||+|+++.|+|+.+...+ .. .|.+++.
T Consensus 66 ~~~~l~~~la~~~g--------~-~-~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~-~g~~~~~ 134 (398)
T 1gc0_A 66 TLNLLEARMASLEG--------G-E-AGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGE-FGVKLRH 134 (398)
T ss_dssp HHHHHHHHHHHHHT--------C-S-EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGG-GTCEEEE
T ss_pred HHHHHHHHHHHHhC--------C-C-cEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHH-cCCEEEE
Confidence 45778888888775 1 2 5555555579999999999999999999999999887766 44 4999988
Q ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCC
Q 011570 171 VVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKES 250 (483)
Q Consensus 171 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~ 250 (483)
++.+ |++.+++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|....+..
T Consensus 135 ~~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~-- 196 (398)
T 1gc0_A 135 VDMA-------DLQALEAAMTP------ATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR-- 196 (398)
T ss_dssp ECTT-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC--
T ss_pred ECCC-------CHHHHHHhcCC------CCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC--
Confidence 8753 78899888753 7899999999999999998 8889999999999999999998643321
Q ss_pred CcchHHHhhhhccccCCCeEEEEecCccccCCCCceE-EEEEecChHHHHHHHHhh-h-c-CCCChHHHHHHHHhcCChh
Q 011570 251 SFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRV-GIIYSYNDQVVSCARKMS-S-F-GLVSSQTQHLIATMLSDDQ 326 (483)
Q Consensus 251 ~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRi-G~li~~~~~l~~~~~~~~-~-~-~~~s~~~q~~~~~~l~~~~ 326 (483)
++ . .+.++++.|+||.+|.+|.|+ ||++++++.+.+.+.... . + +..+++.+.++...+...
T Consensus 197 ---~~-~---------~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 262 (398)
T 1gc0_A 197 ---PL-E---------LGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKTL- 262 (398)
T ss_dssp ---GG-G---------GTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTTH-
T ss_pred ---ch-h---------hCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccchH-
Confidence 11 1 145688899999999999998 999995444443443322 2 2 346777777666666532
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcC-Cce--------------eec----CCceEEEeeecCchhhccChHHHHHHHH
Q 011570 327 FVEKFIAESAKRIAERHKAFTWGLSQV-GIG--------------CLK----SNAGLFLWMDLHHLLKEQTYEAEMALWR 387 (483)
Q Consensus 327 ~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~--------------~~~----~~~g~f~~~~l~~~~~~~~~~~~~~~~~ 387 (483)
....+...++.+.+.+.|.++ ++. +.. ..++ ++.++++.. .+...
T Consensus 263 ------~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~-~~~~~l~~~---------~~~~~ 326 (398)
T 1gc0_A 263 ------NLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGG-MIAFELKGG---------IGAGR 326 (398)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTT-EEEEEETTH---------HHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCce-EEEEEECCC---------HHHHH
Confidence 233344455556666666654 121 111 2344 555677531 12345
Q ss_pred HHHHhcCeEeeC---CCCC------------C---------CCCCCEEEEEecc-CCHHHHHHHHHHHHH
Q 011570 388 VIINEVKLNVSP---GSSF------------H---------CPNPGWFRVCFAN-MDDRTMEIALSRITS 432 (483)
Q Consensus 388 ~Ll~~~gV~v~p---g~~f------------~---------~~~~~~iRis~~~-~~~e~l~~~l~~L~~ 432 (483)
.++++.||.++. |+.. . ...++++|||++. .++++++.+.++|++
T Consensus 327 ~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~ 396 (398)
T 1gc0_A 327 RFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA 396 (398)
T ss_dssp HHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence 566677887665 3210 0 0124799999986 355666666666654
No 177
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.94 E-value=5.9e-26 Score=229.81 Aligned_cols=283 Identities=11% Similarity=0.084 Sum_probs=190.1
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEE-eCChhHHHHHHHHHhcCCCCeEEEeCCCCcCh-HHHHhhh-cCcEEEEeec
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVM-SGGATGAHETVAFCLADPGDAFLVPTPYYPGF-DRDLRWR-TGVQLVPVVC 173 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~i-t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~-~~~~~~~-~G~~~~~v~~ 173 (483)
.++|+.++++++ ++ ++++|++ |+|+++++..++.+++++| .+.+..+.|... ...+... .|.+++.+++
T Consensus 81 ~~~~~~la~~~g------~~-~~~~i~~~t~g~t~al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~ 152 (398)
T 2fyf_A 81 GRVRSGLAELFS------LP-DGYEVILGNGGATAFWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITS 152 (398)
T ss_dssp HHHHHHHHHHTT------CC-TTCEEEEEETCHHHHHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEEC
T ss_pred HHHHHHHHHHhC------CC-CCceEEEeCCchhHHHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEec
Confidence 455555555554 22 3478999 9999999999999999887 223333333211 1122221 1778888887
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcc
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFV 253 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~ 253 (483)
++ ++..+.+ + ..++++|++++|+||||.+++.+++.++ +|++||+||+|..+ .. + .
T Consensus 153 ~~--g~~~~~~-----i------~~~~~~v~~~~~~nptG~~~~~~~i~~~------~~~~vivD~a~~~~--~~--~-~ 208 (398)
T 2fyf_A 153 DP--GSAPEPQ-----T------DPSVDVIAWAHNETSTGVAVAVRRPEGS------DDALVVIDATSGAG--GL--P-V 208 (398)
T ss_dssp CT--TCCCCCC-----C------CTTCSEEEEESEETTTTEECCCCCCTTC------C-CEEEEECTTTTT--TS--C-C
T ss_pred CC--CCCCCcc-----c------cCCCCEEEEeCcCCCcceecchHHhhhh------cCCeEEEEeccccC--Cc--c-c
Confidence 62 3333321 2 2378999999999999999996666554 79999999999753 21 1 1
Q ss_pred hHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh-----------------------hhcCCC
Q 011570 254 SIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM-----------------------SSFGLV 310 (483)
Q Consensus 254 s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~-----------------------~~~~~~ 310 (483)
++ . +..+++.|+||.+|++| ++||++++ +.+.+.++.. ..+++.
T Consensus 209 ~~----~-------~~di~~~s~sK~~~~~g-g~g~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 275 (398)
T 2fyf_A 209 DI----A-------ETDAYYFAPQKNFASDG-GLWLAIMS-PAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTP 275 (398)
T ss_dssp CG----G-------GCSEEEECTTSTTCSCS-SEEEEEEC-HHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCC
T ss_pred Cc----c-------cCcEEEEecCcccCCCC-ceEEEEEC-HHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCC
Confidence 11 1 12367889999999775 59999994 5554443221 112445
Q ss_pred ChHHHHHHHHhcCChhHHHHH--HHHHHHHHHHHHHHHHHhhhcC-Cceeec--C--CceEEEeeecCchhhccChHHHH
Q 011570 311 SSQTQHLIATMLSDDQFVEKF--IAESAKRIAERHKAFTWGLSQV-GIGCLK--S--NAGLFLWMDLHHLLKEQTYEAEM 383 (483)
Q Consensus 311 s~~~q~~~~~~l~~~~~~~~~--~~~~~~~l~~~~~~l~~~L~~~-gi~~~~--~--~~g~f~~~~l~~~~~~~~~~~~~ 383 (483)
+..++.++..++.. +.+. +++.+++++++++++.+.|+++ |+++.. + .+++++|++++...+ ..
T Consensus 276 ~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 346 (398)
T 2fyf_A 276 AIATLALLAEQIDW---LVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDVD------AG 346 (398)
T ss_dssp CHHHHHHHHHHHHH---HHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTSC------HH
T ss_pred CHHHHHHHHHHHHH---HHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCCC------HH
Confidence 55666666666532 2222 5677788889999999999988 888763 4 345599999874322 23
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 384 ALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 384 ~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
++.+.|.++ ||.+++|. ...+++++||+++. .+++++++++++|++++++
T Consensus 347 ~l~~~L~~~-gI~v~~g~--~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 347 TVAKILRAN-GIVDTEPY--RKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp HHHHHHHHT-TCBCCSCC--TTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHC-CcEEecCc--ccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 677777765 99999873 22235799999985 5999999999999988754
No 178
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.94 E-value=1.5e-25 Score=229.57 Aligned_cols=276 Identities=13% Similarity=0.103 Sum_probs=179.0
Q ss_pred CCcEEEeCChhHHHHHHHHHhc---------CCC-CeEEEeCCCCcChHHHHhhhcC------------cEEEEeecCCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLA---------DPG-DAFLVPTPYYPGFDRDLRWRTG------------VQLVPVVCDSS 176 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~---------~~g-d~Vlv~~P~y~~~~~~~~~~~G------------~~~~~v~~~~~ 176 (483)
.++|++|+|+++++..++.++. .+| |.|++.+|+|+++........| ..++.+|.
T Consensus 122 ~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~--- 198 (433)
T 1z7d_A 122 YDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY--- 198 (433)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT---
T ss_pred CCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC---
Confidence 5799999999999999998753 467 9999999999876443222223 23444442
Q ss_pred CCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchH
Q 011570 177 NDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSI 255 (483)
Q Consensus 177 ~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~ 255 (483)
.|++.|+++++. .++++|+++..+|+||.+ ++.+.+++|.++|++||+++|+||+|.++.+.+ .. ...
T Consensus 199 ----~d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g-~~-~~~ 267 (433)
T 1z7d_A 199 ----DDLEALEEELKD-----PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTG-KL-LCV 267 (433)
T ss_dssp ----TCHHHHHHHHTS-----TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS-SS-SGG
T ss_pred ----CCHHHHHHHhCC-----CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCC-cc-hhh
Confidence 278999998841 267665544336779975 688899999999999999999999998743333 21 121
Q ss_pred HHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh--hhcCCCChHHHHHHHHhcCChhHHHHHH
Q 011570 256 AEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM--SSFGLVSSQTQHLIATMLSDDQFVEKFI 332 (483)
Q Consensus 256 ~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~ 332 (483)
+... ....+ .||||.+| +| +|+||+++ ++.+.+.+... ...+..+++++.++.++++... +
T Consensus 268 -~~~~-----~~~di---~t~sK~l~-~G~~~~G~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~---~-- 331 (433)
T 1z7d_A 268 -HHYN-----VKPDV---ILLGKALS-GGHYPISAVLA-NDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLI---N-- 331 (433)
T ss_dssp -GGGT-----CCCSE---EEECGGGG-TTSSCCEEEEE-CHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHH---H--
T ss_pred -HhcC-----CCCCE---EEECcccc-CCCCCeEEEEE-CHHHHhhhccccccccCCCCHHHHHHHHHHHHHHH---h--
Confidence 1111 11222 28999999 89 99999999 45555543321 1113467777777766664211 1
Q ss_pred HHHHHHHHHHHHHHHHhhhcC--Cce---eecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCC
Q 011570 333 AESAKRIAERHKAFTWGLSQV--GIG---CLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPN 407 (483)
Q Consensus 333 ~~~~~~l~~~~~~l~~~L~~~--gi~---~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~ 407 (483)
....++++++++++.+.|+++ +++ ..++ .|+|+|++++... . ...+++..|++ +||.+.|+ +
T Consensus 332 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~-~g~~~~i~~~~~~--~---~~~~~~~~l~~-~Gv~v~~~------~ 398 (433)
T 1z7d_A 332 EKLCENAEKLGGPFLENLKRELKDSKIVRDVRG-KGLLCAIEFKNEL--V---NVLDICLKLKE-NGLITRDV------H 398 (433)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEE-ETTEEEEEECTTT--C---CHHHHHHHHHH-TTEECCEE------T
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe-eeeEEEEEEccCh--h---HHHHHHHHHHH-CCeEEecC------C
Confidence 123445556666666666553 332 2233 4568899887420 0 12367777775 59999985 2
Q ss_pred CCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 408 PGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 408 ~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
.+++|++++. .+++++++++++|++++++.
T Consensus 399 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 429 (433)
T 1z7d_A 399 DKTIRLTPPLCITKEQLDECTEIIVKTVKFF 429 (433)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCcCCCHHHHHHHHHHHHHHHHHH
Confidence 5689999875 59999999999999988764
No 179
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.94 E-value=1.7e-26 Score=235.94 Aligned_cols=335 Identities=13% Similarity=0.075 Sum_probs=205.8
Q ss_pred CCCcccccchh--hhhc--HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 45 PNGVIQMGLAE--NLLC--HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 45 ~~~~i~l~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
...+||++.+. ++++ ++.+.+++.+.. .....|+. ..++++++++++.+.++ +++
T Consensus 51 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~-------------~~~~~~~~---~~~~~~~la~~l~~~~~-----~~~ 109 (427)
T 3fq8_A 51 GNRYIDYVGTWGPAICGHAHPEVIEALKVAM-------------EKGTSFGA---PCALENVLAEMVNDAVP-----SIE 109 (427)
T ss_dssp SCEEEESSGGGTTCTTCBTCHHHHHHHHHHH-------------TTCSCCSS---CCHHHHHHHHHHHHHST-----TCS
T ss_pred CCEEEECCCchhhhccCCCCHHHHHHHHHHH-------------HhCCCcCC---CCHHHHHHHHHHHHhCC-----CCC
Confidence 45678988875 4443 455555554311 11112321 35677777777776543 578
Q ss_pred cEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCc-------------------EEEEeecCCCCCc
Q 011570 121 RIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGV-------------------QLVPVVCDSSNDF 179 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~-------------------~~~~v~~~~~~~~ 179 (483)
+|++|+|+++++..++.... .+++.|++.+|+|+++...+....|. .++.++.+
T Consensus 110 ~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 184 (427)
T 3fq8_A 110 MVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN----- 184 (427)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-----
T ss_pred EEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC-----
Confidence 99999999999999984321 23578999999997654332221111 12222221
Q ss_pred ccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCC-HHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHh
Q 011570 180 KVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLD-RETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEI 258 (483)
Q Consensus 180 ~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~-~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l 258 (483)
|+++|++++++. ..++++|+++.++|++|.+.+ .+.+++|.++|++||++||+||+|.++ ..+ .. .. ...
T Consensus 185 --d~~~le~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g-~~-~~-~~~ 255 (427)
T 3fq8_A 185 --DLEAVKALFAEN---PGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIA-YG-GV-QEK 255 (427)
T ss_dssp --CHHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTB-TT-HH-HHH
T ss_pred --CHHHHHHHHHhC---CCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccC-cc-hh-hHh
Confidence 789999998752 225666666666778887665 566999999999999999999999975 333 21 12 222
Q ss_pred hhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh-----hcCCCChHHHHHHHHhcC---ChhHHHH
Q 011570 259 IDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS-----SFGLVSSQTQHLIATMLS---DDQFVEK 330 (483)
Q Consensus 259 ~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~-----~~~~~s~~~q~~~~~~l~---~~~~~~~ 330 (483)
.. .... +.||||++| +|+|+||+++ ++.+.+.+.... ..+..+++++.++.++++ +.++ .+
T Consensus 256 ~~-----~~~d---i~t~sK~~~-~G~~~G~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~-~~ 324 (427)
T 3fq8_A 256 FG-----VTPD---LTTLGKIIG-GGLPVGAYGG-KREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGT-YE 324 (427)
T ss_dssp TT-----CCCS---EEEECGGGG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTH-HH
T ss_pred cC-----CCCC---hhhhhhhhh-CCcceEEEEE-cHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCH-HH
Confidence 11 1112 358999999 8999999998 566665544311 123457788877776663 2222 22
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhc-------cChHHHHHHHHHHHHhcCeEeeCCCCC
Q 011570 331 FIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKE-------QTYEAEMALWRVIINEVKLNVSPGSSF 403 (483)
Q Consensus 331 ~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~-------~~~~~~~~~~~~Ll~~~gV~v~pg~~f 403 (483)
++.+.. ...++.+.+.+.+.++....+..|+++|++++..... .......+++..+++ +||.++|+..
T Consensus 325 ~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~Gi~v~~~~~- 399 (427)
T 3fq8_A 325 YLDQIT---KRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLE-QGIYLAPSQF- 399 (427)
T ss_dssp HHHHHH---HHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHH-TTEECCSSTT-
T ss_pred HHHHHH---HHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHH-CCcEEecCCC-
Confidence 222222 2223333333334455444445567889988642100 011123467777775 5999998752
Q ss_pred CCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 404 HCPNPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 404 ~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
.++|+++. .+++++++++++|++++++
T Consensus 400 -----~r~~~~~~-~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 400 -----EAGFTSLA-HTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp -----SCEECCTT-CCHHHHHHHHHHHHHHHHH
T ss_pred -----CCEEeeCc-CCHHHHHHHHHHHHHHHHh
Confidence 24555544 5999999999999998864
No 180
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.94 E-value=2.2e-25 Score=227.07 Aligned_cols=304 Identities=13% Similarity=0.148 Sum_probs=205.6
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcE
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQ 167 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~ 167 (483)
.|++..|..++++++.+.+.+.+| .+ ++++++++++++..++.++ +++||+|+++.|+|..+...+... |.+
T Consensus 33 ~~~~~~g~~~l~~~l~~~la~~~g----~~--~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~ 105 (418)
T 2c81_A 33 ISGYWTGEESMERKFAKAFADFNG----VP--YCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIATATAVLNV-NAL 105 (418)
T ss_dssp TTSBCCSSCCHHHHHHHHHHHHHT----CS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHT-TCE
T ss_pred ccCcccCCHHHHHHHHHHHHHHhC----CC--cEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHhHHHHHHHc-CCE
Confidence 376666755555555555554444 22 5666777789999999999 899999999999999999988875 999
Q ss_pred EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc-c
Q 011570 168 LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV-F 246 (483)
Q Consensus 168 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~-~ 246 (483)
++.+++++ ++|.+|++.|++++++ ++++|+++ ||||...+ +++|.++|+++|++||+||+|..+. +
T Consensus 106 ~~~~~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~---~~~G~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~ 172 (418)
T 2c81_A 106 PVFVDVEA-DTYCIDPQLIKSAITD------KTKAIIPV---HLFGSMAN---MDEINEIAQEHNLFVIEDCAQSHGSVW 172 (418)
T ss_dssp EEEECBCT-TTCSBCHHHHGGGCCT------TEEEECCB---CCTTCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEE
T ss_pred EEEEecCC-CCCCcCHHHHHHhhCC------CCeEEEEe---CCcCCccc---HHHHHHHHHHCCCEEEEECcccccCcc
Confidence 99999874 3678999999988753 68888764 58999876 8888999999999999999998764 4
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecC--ccccCCCCceEEEEEecChHHHHHHHHhhhcCC------------CC-
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSL--SKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGL------------VS- 311 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~--SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~------------~s- 311 (483)
.. .. +..+ . .+++.|| ||.+|. | |+||++++++.+.+.+......+. ..
T Consensus 173 ~~-~~---~~~~---------~-~~~~~s~s~~K~~~~-g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (418)
T 2c81_A 173 NN-QR---AGTI---------G-DIGAFSCQQGKVLTA-G-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQ 236 (418)
T ss_dssp TT-EE---TTSS---------S-SEEEEECCTTSSSCS-S-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBS
T ss_pred CC-Ee---cccc---------c-ceEEEeccCCcccCC-C-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhh
Confidence 32 11 1111 1 2566788 999985 8 999999966666665554322110 00
Q ss_pred --------------hHHHHHHH-HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceee-cCCc-eEEEe----ee
Q 011570 312 --------------SQTQHLIA-TMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCL-KSNA-GLFLW----MD 369 (483)
Q Consensus 312 --------------~~~q~~~~-~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~-~~~~-g~f~~----~~ 369 (483)
...+.++. ..+. .+++..++.++.++++.+.|.++ |+++. ++.+ +.+.| +.
T Consensus 237 ~~~~~~~~g~~~~~~~~~aa~~~~~l~-------~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~ 309 (418)
T 2c81_A 237 LVKKGDIQGSNYCLSEFQSAILLDQLQ-------ELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFR 309 (418)
T ss_dssp EEECCSSCCCBCCCCHHHHHHHHHHHT-------THHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEE
T ss_pred ccccccccCcCCCcCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEE
Confidence 11122221 1111 13344455566678888899887 88876 4555 33333 66
Q ss_pred cCchhhccChHHHHHHHHHHHHhcCeE---eeCCCCCCC---------------------------CC-------CCEEE
Q 011570 370 LHHLLKEQTYEAEMALWRVIINEVKLN---VSPGSSFHC---------------------------PN-------PGWFR 412 (483)
Q Consensus 370 l~~~~~~~~~~~~~~~~~~Ll~~~gV~---v~pg~~f~~---------------------------~~-------~~~iR 412 (483)
++..... . .+..++.+.|.+++||. +++|..... .- .+.+|
T Consensus 310 ~~~~~~~-~-~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 387 (418)
T 2c81_A 310 FDPVKFG-G-LNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIV 387 (418)
T ss_dssp ECGGGTT-T-CCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEE
T ss_pred Ecccccc-c-cCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEE
Confidence 6531000 0 01236777777655999 888752110 00 14899
Q ss_pred EEecc-C-CHHHHHHHHHHHHHHHHHh
Q 011570 413 VCFAN-M-DDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 413 is~~~-~-~~e~l~~~l~~L~~~l~~~ 437 (483)
|++.. . ++++++.+++.|++++++.
T Consensus 388 l~~~~~~gt~edi~~~~~~l~~~~~~~ 414 (418)
T 2c81_A 388 IHHAILLAEPSHLSLLVDAVAELARKF 414 (418)
T ss_dssp EEGGGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred ecCCccCCCHHHHHHHHHHHHHHHHhh
Confidence 99954 6 8999999999999987653
No 181
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.94 E-value=2.7e-25 Score=222.56 Aligned_cols=290 Identities=10% Similarity=0.079 Sum_probs=206.3
Q ss_pred CCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh---cCCCCeEEEeCCCCcChHHHHhhhcCcEEE
Q 011570 93 YHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL---ADPGDAFLVPTPYYPGFDRDLRWRTGVQLV 169 (483)
Q Consensus 93 ~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l---~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~ 169 (483)
.....++++++|++++ .+ ++++|+|+++++..++.++ +++||+|+++.|+|+.+...+... |++++
T Consensus 31 ~~~~~~l~~~la~~~~--------~~--~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~ 99 (375)
T 2fnu_A 31 GKRSLLFEEALCEFLG--------VK--HALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANMLLES-GYTPV 99 (375)
T ss_dssp SHHHHHHHHHHHHHHT--------CS--EEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHHHHHT-TCEEE
T ss_pred ChHHHHHHHHHHHHhC--------CC--eEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHHHHHHHC-CCEEE
Confidence 3457899999999986 22 9999999999999999999 899999999999999999988875 99999
Q ss_pred EeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC
Q 011570 170 PVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE 249 (483)
Q Consensus 170 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~ 249 (483)
.+++++++ .+|++.|++++.+ ++++|++++| ||.+.+ +++|.++|+++|++||+||+|....+..
T Consensus 100 ~~~~~~~~--~~d~~~l~~~i~~------~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~~- 164 (375)
T 2fnu_A 100 FAGIKNDG--NIDELALEKLINE------RTKAIVSVDY---AGKSVE---VESVQKLCKKHSLSFLSDSSHALGSEYQ- 164 (375)
T ss_dssp ECCBCTTS--SBCGGGSGGGCCT------TEEEEEEECG---GGCCCC---HHHHHHHHHHHTCEEEEECTTCTTCEET-
T ss_pred EeccCCCC--CCCHHHHHhhcCc------CceEEEEeCC---cCCccC---HHHHHHHHHHcCCEEEEECccccCCeEC-
Confidence 99987543 7899999887753 7888888877 999998 7888889999999999999997532211
Q ss_pred CCcchHHHhhhhccccCCCeEEEEecCc--cccCCCCceEEEEEe-cChHHHHHHHHhhhcC------------------
Q 011570 250 SSFVSIAEIIDQDIACNRNLIHIVYSLS--KDMGFPGFRVGIIYS-YNDQVVSCARKMSSFG------------------ 308 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~~~~vi~~~S~S--K~~g~~GlRiG~li~-~~~~l~~~~~~~~~~~------------------ 308 (483)
. .. + . ... .+++.||| |.+|. | +|++++ +++.+.+.+......+
T Consensus 165 ~--~~---~-~-----~~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (375)
T 2fnu_A 165 N--KK---V-G-----GFA-LASVFSFHAIKPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNF 229 (375)
T ss_dssp T--EE---T-T-----SSS-SEEEEECCTTSSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBC
T ss_pred C--ee---c-c-----ccC-CeEEEeCCCCCCccc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccC
Confidence 1 11 1 1 112 36778888 99974 7 688877 4466666555433211
Q ss_pred CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecC-----CceEEEeeecCchhhccChHHH
Q 011570 309 LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKS-----NAGLFLWMDLHHLLKEQTYEAE 382 (483)
Q Consensus 309 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~-----~~g~f~~~~l~~~~~~~~~~~~ 382 (483)
..+.+...+....+ . ++++..++++++++++.+.|+++ |+++..+ .+++++|+.++... ....
T Consensus 230 ~~~~~~~a~~~~~~---~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 298 (375)
T 2fnu_A 230 RLNEIQSALGLSQL---K----KAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKF----FTCK 298 (375)
T ss_dssp CCCHHHHHHHHHHH---T----THHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGG----GGGH
T ss_pred CCCHHHHHHHHHHH---H----HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccc----cchH
Confidence 12222222211111 1 24455667788889999999987 7877654 12345577776320 0013
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCCC---------------------CCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 383 MALWRVIINEVKLNVSPGSSFHCP---------------------NPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 383 ~~~~~~Ll~~~gV~v~pg~~f~~~---------------------~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
.++.+.|. ++||.++.+ |.+. ..+++||+++. .++++++.++++|++++++.
T Consensus 299 ~~l~~~L~-~~gi~v~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 299 KLILESLH-KRGILAQVH--YKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp HHHHHHHH-HTTEECBCC--CCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HCCCCcccc--ccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 36777775 569999832 2110 12689999975 48999999999999988764
No 182
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.94 E-value=7.1e-25 Score=224.10 Aligned_cols=282 Identities=15% Similarity=0.130 Sum_probs=194.2
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH----HhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD----LRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~~G~~~~~v 171 (483)
..++++.+|++++ . .+.|++++|+ +++..++.+++++||+|+++.|+|+.+... ++. .|++++.+
T Consensus 116 ~~~l~~~lA~l~g--------~-~~~v~~~sG~-~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~-~G~~v~~v 184 (445)
T 1qgn_A 116 TVVLEEKISALEG--------A-ESTLLMASGM-CASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPK-MGITATVI 184 (445)
T ss_dssp HHHHHHHHHHHHT--------C-SEEEEESCHH-HHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGG-GTCEEEEE
T ss_pred HHHHHHHHHHHhC--------C-CcEEEeCCHH-HHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHH-cCCEEEEe
Confidence 4588888888875 2 2556666665 999999999999999999999999987764 334 49999998
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCce-eEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRI-KGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKES 250 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~-~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~ 250 (483)
+.+ |++.|++++++ ++ ++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+. .
T Consensus 185 ~~~-------d~~~l~~ai~~------~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~--~ 246 (445)
T 1qgn_A 185 DPA-------DVGALELALNQ------KKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ--K 246 (445)
T ss_dssp CSS-------CHHHHHHHHHH------SCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC--C
T ss_pred CCC-------CHHHHHHHhcc------CCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC--C
Confidence 753 78999999975 67 99999999999999998 788899999999999999999754221 1
Q ss_pred CcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHhh-hcCC-CChHHHHHHHHhcCChhH
Q 011570 251 SFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKMS-SFGL-VSSQTQHLIATMLSDDQF 327 (483)
Q Consensus 251 ~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~~-~~~~-~s~~~q~~~~~~l~~~~~ 327 (483)
+ + ..+..++++|+||.+|..| +++||++++ +.+.+.+.... .++. .+++...++...++.
T Consensus 247 ---~---~-------~~g~Div~~S~sK~~gg~gd~~~G~l~~~-~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~--- 309 (445)
T 1qgn_A 247 ---A---L-------ALGADLVLHSATKFLGGHNDVLAGCISGP-LKLVSEIRNLHHILGGALNPNAAYLIIRGMKT--- 309 (445)
T ss_dssp ---T---T-------TTTCSEEEECTTTTTTCSSSCCCEEEEEC-HHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG---
T ss_pred ---c---c-------ccCCEEEEECCcccccccccceEEEEEEC-HHHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH---
Confidence 1 1 1244578999999998554 479999994 55555544332 2333 344443444333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcC-Cc-eeecC----------------CceEEEeeecCchhhccChHHHHHHHHHH
Q 011570 328 VEKFIAESAKRIAERHKAFTWGLSQV-GI-GCLKS----------------NAGLFLWMDLHHLLKEQTYEAEMALWRVI 389 (483)
Q Consensus 328 ~~~~~~~~~~~l~~~~~~l~~~L~~~-gi-~~~~~----------------~~g~f~~~~l~~~~~~~~~~~~~~~~~~L 389 (483)
+..+.++..+++..+.+.|+++ ++ .+..| ..|.++++.++... .....+...+
T Consensus 310 ----l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~-----~~~~~~l~~l 380 (445)
T 1qgn_A 310 ----LHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDL-----LTTAKFVDAL 380 (445)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCH-----HHHHHHHHHC
T ss_pred ----HHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCH-----HHHHHHHHhC
Confidence 2333344556677788888876 45 34333 13557788887411 1112333332
Q ss_pred HHhcCeEeeCCCCCCC---------------------CCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 390 INEVKLNVSPGSSFHC---------------------PNPGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 390 l~~~gV~v~pg~~f~~---------------------~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
+..++.++.|..+.. ..++.||||++ .|+++.+++.|++++++
T Consensus 381 -~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG---~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 381 -KIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG---VEDFDDLKADILQALDS 444 (445)
T ss_dssp -SSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC---SSCHHHHHHHHHHHHHH
T ss_pred -CCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEec---cCCHHHHHHHHHHHHhh
Confidence 123777777765421 12479999998 25789999999888764
No 183
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.94 E-value=3.6e-25 Score=229.20 Aligned_cols=350 Identities=10% Similarity=0.027 Sum_probs=224.9
Q ss_pred CCCcccccch--hhhhc--HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 45 PNGVIQMGLA--ENLLC--HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 45 ~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
...+||+..+ .+.++ ++.+.+++.+. +.....|....+..++++++++++.+.++ .+.+
T Consensus 53 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~-------------l~~~~~~~~~~~~~~~~~~la~~l~~~~~----~~~~ 115 (476)
T 3i5t_A 53 GRRLIDGPAGMWCAQVGYGRREIVDAMAHQ-------------AMVLPYASPWYMATSPAARLAEKIATLTP----GDLN 115 (476)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHH-------------HHHCCCCCTTTCBCHHHHHHHHHHHTTSS----TTCC
T ss_pred CCEEEECCCchhhccCCCCCHHHHHHHHHH-------------HHhccCcccCccCCHHHHHHHHHHHhcCC----CCcC
Confidence 4567888877 44453 45555555431 01111222224567889999999987654 4567
Q ss_pred cEEEeCChhHHHHHHHHHhcC--------CCCeEEEeCCCCcChHHHHhhhcC--------------cEEEEeecCCCCC
Q 011570 121 RIVMSGGATGAHETVAFCLAD--------PGDAFLVPTPYYPGFDRDLRWRTG--------------VQLVPVVCDSSND 178 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~--------~gd~Vlv~~P~y~~~~~~~~~~~G--------------~~~~~v~~~~~~~ 178 (483)
+|++++|+++++..++.++.. .++.|++.+|+|.++........| ...++.|....+
T Consensus 116 ~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~- 194 (476)
T 3i5t_A 116 RIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHA- 194 (476)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGC-
T ss_pred EEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCccccc-
Confidence 999999999999999988753 357999999999887655443212 223333322111
Q ss_pred cccC--------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCcC-CCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC
Q 011570 179 FKVT--------MEALEAAYEKAQESNIRIKGVLITNPSNPLGT-FLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE 249 (483)
Q Consensus 179 ~~~d--------~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~-~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~ 249 (483)
+..+ +++|++.+.+.. ..++++|+++.++|++|. +++.+.+++|.++|++||+++|+||+|.++...+
T Consensus 195 ~~~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G- 271 (476)
T 3i5t_A 195 GNRSQEAFLDDLVQEFEDRIESLG--PDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCG- 271 (476)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS-
T ss_pred CCCchHHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc-
Confidence 2222 778888886421 125677777777888886 7899999999999999999999999999854444
Q ss_pred CCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh-------h--hcCCCChHHHHHHH
Q 011570 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM-------S--SFGLVSSQTQHLIA 319 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~-------~--~~~~~s~~~q~~~~ 319 (483)
. +.+...... ..+.++ +|||++| .| +|+|++++ ++.+.+.+... . ..+..++++++++.
T Consensus 272 ~-~~~~~~~~~-----v~pdi~---t~sK~l~-~G~~plg~v~~-~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~ 340 (476)
T 3i5t_A 272 E-WFASEKVFG-----VVPDII---TFAKGVT-SGYVPLGGLAI-SEAVLARISGENAKGSWFTNGYTYSNQPVACAAAL 340 (476)
T ss_dssp S-SCHHHHTTC-----CCCSEE---EECGGGG-TTSSCCEEEEE-CHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHH
T ss_pred C-ceeeecccC-----CCcchh---hhhhhhc-CCCcCeEEEEE-CHHHHHHHhcCCcccccccccCCCCcCHHHHHHHH
Confidence 2 223321211 112222 7899998 69 99999999 66776665432 1 12446788888887
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC----CceeecCCceEEEeeecCchhhcc-Ch----HHHHHHHHHHH
Q 011570 320 TMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV----GIGCLKSNAGLFLWMDLHHLLKEQ-TY----EAEMALWRVII 390 (483)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----gi~~~~~~~g~f~~~~l~~~~~~~-~~----~~~~~~~~~Ll 390 (483)
++|+... + +...+.++++.+++.+.|+++ .+....+.| .|+++++....... .+ .....++..++
T Consensus 341 aaL~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~G-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 414 (476)
T 3i5t_A 341 ANIELME---R--EGIVDQAREMADYFAAALASLRDLPGVAETRSVG-LVGCVQCLLDPTRADGTAEDKAFTLKIDERCF 414 (476)
T ss_dssp HHHHHHH---H--TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEET-TEEEEEECCC-----CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHH---h--HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC-ceeEEEEecCccccccccchhHHHHHHHHHHH
Confidence 7775311 1 223344455555566655543 244445555 57778776421110 00 01336677777
Q ss_pred HhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhhc
Q 011570 391 NEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 391 ~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
+ +||.++|. + +++||+... .+++++++++++|++++++..++
T Consensus 415 ~-~Gv~v~~~------g-~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~~ 457 (476)
T 3i5t_A 415 E-LGLIVRPL------G-DLCVISPPLIISRAQIDEMVAIMRQAITEVSAA 457 (476)
T ss_dssp H-TTEECEEE------T-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred H-CCCEEEec------C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5 59999983 1 689999654 59999999999999999876543
No 184
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.94 E-value=7.2e-26 Score=233.98 Aligned_cols=319 Identities=16% Similarity=0.204 Sum_probs=207.8
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCC-----C----CeEEEeCCCCcChHHH
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADP-----G----DAFLVPTPYYPGFDRD 159 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~-----g----d~Vlv~~P~y~~~~~~ 159 (483)
.|+...+..+|+++++++++ .+++++|+|+++++..++.+++++ | |+|++..+.|..+...
T Consensus 69 ~y~~~~~~~~l~~~la~~~~----------~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~ 138 (467)
T 2oqx_A 69 AYSGSRSYYALAESVKNIFG----------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGH 138 (467)
T ss_dssp CSSSCHHHHHHHHHHHHHHC----------CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHH
T ss_pred eeccCchhHHHHHHHHHHhC----------cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEecccccccchhh
Confidence 57777778999999999975 368999999999999999999888 8 9988875444444444
Q ss_pred HhhhcCcEEEEeec----CCC----CCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCC-cCCCCHHHHHHHHHHHhh
Q 011570 160 LRWRTGVQLVPVVC----DSS----NDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPL-GTFLDRETLKDIVSFINE 230 (483)
Q Consensus 160 ~~~~~G~~~~~v~~----~~~----~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPt-G~~~~~~~l~~i~~~a~~ 230 (483)
.... |..++.... +.. .++.+|+++|++++.+.. ..++++|++++|+||| |.+++.+++++|+++|++
T Consensus 139 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~--~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~ 215 (467)
T 2oqx_A 139 SQIN-GCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG--PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKK 215 (467)
T ss_dssp HHHT-TCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC--GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHH
T ss_pred hhcc-CcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcC--CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHH
Confidence 4443 777665422 111 245689999999997521 1268999999999998 999999999999999999
Q ss_pred cCcEEEEcccccc----------CccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCC-CceEEEEEecCh---H
Q 011570 231 KNIHLVCDEIYAA----------TVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFP-GFRVGIIYSYND---Q 296 (483)
Q Consensus 231 ~~~~iI~Deay~~----------~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~-GlRiG~li~~~~---~ 296 (483)
||++||+|+++.. ..+.+ . +...+...+. ...+ +++.|+||.+|++ | ||++++++ .
T Consensus 216 ~gi~li~D~a~~~e~~~~~~~~~~~~~g-~---~~~~~~~~~~-~~~d--~~~~s~sK~~g~~~G---g~~~~~~~~~~~ 285 (467)
T 2oqx_A 216 YDIPVVMDSARFAENAYFIKQREAEYKD-W---TIEQITRETY-KYAD--MLAMSAKKDAMVPMG---GLLCMKDDSFFD 285 (467)
T ss_dssp TTCCEEEECTTHHHHHHHHHHHCGGGTT-S---CHHHHHHHHG-GGCS--EEEEESSSTTCCSSC---EEEEECSGGGHH
T ss_pred cCCEEEEEchhhhhhhhhcccccccccC-c---cHHHHhhhhh-ccCC--eEEEecccccCCCCc---eEEEecChhHHH
Confidence 9999999965532 12332 2 2333220000 0123 3467999999877 5 88888555 2
Q ss_pred HHHHHHHhh--h-----cCCCChHHHHHHHHhcCChhHHHHHHH-HHHHHHHHHHHHHHHhhhcCCceeecCCceEEEee
Q 011570 297 VVSCARKMS--S-----FGLVSSQTQHLIATMLSDDQFVEKFIA-ESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWM 368 (483)
Q Consensus 297 l~~~~~~~~--~-----~~~~s~~~q~~~~~~l~~~~~~~~~~~-~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~ 368 (483)
....++... . ++..+.....++...+ ..+++ +..+...++++++.+.|.+.|+++. +.+++++|+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~ 358 (467)
T 2oqx_A 286 VYTECRTLCVVQEGFPTYGGLEGGAMERLAVGL------YDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQ-QAGGHAAFV 358 (467)
T ss_dssp HHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHH------HHTTCHHHHHHHHHHHHHHHHHHHHTTCCEE-EECSSCEEE
T ss_pred HHHHHHHhhhccCCcccccchhhhHHHHHHHhh------HhhhhHHHHHHHHHHHHHHHHHHHHCCCeee-cCCceEEEE
Confidence 223332221 1 1112222222221111 11111 2233445677888888888788877 777889999
Q ss_pred ecCc---hhhccChHHHHHHHHHHHHhcCeEeeCCCCC--CC---------CCCCEEEEEecc--CCHHHHHHHHHHHHH
Q 011570 369 DLHH---LLKEQTYEAEMALWRVIINEVKLNVSPGSSF--HC---------PNPGWFRVCFAN--MDDRTMEIALSRITS 432 (483)
Q Consensus 369 ~l~~---~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f--~~---------~~~~~iRis~~~--~~~e~l~~~l~~L~~ 432 (483)
+++. ..+...+ ....++..|+.++||.+.|+..| +. ...+++||+++. .+++++++++++|++
T Consensus 359 ~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~ 437 (467)
T 2oqx_A 359 DAGKLLPHIPADQF-PAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKH 437 (467)
T ss_dssp EHHHHSTTSCGGGC-HHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHH
T ss_pred echhhcccCCcccc-cHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHH
Confidence 8853 1111111 12356777756779999985432 11 013789999974 589999999999999
Q ss_pred HHHHhh
Q 011570 433 FMLKNV 438 (483)
Q Consensus 433 ~l~~~~ 438 (483)
++++..
T Consensus 438 ~l~~~~ 443 (467)
T 2oqx_A 438 VKENAA 443 (467)
T ss_dssp HHHSGG
T ss_pred HHhhhh
Confidence 987653
No 185
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.94 E-value=5.4e-26 Score=234.92 Aligned_cols=291 Identities=10% Similarity=0.072 Sum_probs=203.5
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCe---EEEeCCCCcChHH----HHhhhcCcEEE
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDA---FLVPTPYYPGFDR----DLRWRTGVQLV 169 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~---Vlv~~P~y~~~~~----~~~~~~G~~~~ 169 (483)
.++++.++++++ .++++|++|+|++++++.++.+++++||. |+++.|+|++... .++.. |++++
T Consensus 114 ~~l~~~la~~~g--------~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~-G~~~~ 184 (465)
T 3e9k_A 114 ESIVGLMKDIVG--------ANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLH-GLNIE 184 (465)
T ss_dssp HHHHGGGHHHHT--------CCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHT-TCCHH
T ss_pred HHHHHHHHHHcC--------CCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHc-CCcce
Confidence 557777777765 56889999999999999999999887765 9999999987443 44444 87752
Q ss_pred -----EeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC
Q 011570 170 -----PVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT 244 (483)
Q Consensus 170 -----~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~ 244 (483)
.++. ++++.+|+++++++|+++ ++++++|++++||||||.+++ +++|.++|+++|++||+|++|+.
T Consensus 185 ~~~v~~~~~--~~~~~~d~~~l~~~i~~~---~~~~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~- 255 (465)
T 3e9k_A 185 ESMRMIKPR--EGEETLRIEDILEVIEKE---GDSIAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAV- 255 (465)
T ss_dssp HHEEEECCC--TTCSSCCHHHHHHHHHHH---GGGEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTT-
T ss_pred eeeEEEecC--CCCCccCHHHHHHHHHhc---CCCeEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhc-
Confidence 2233 345789999999999753 237899999999999999999 78888899999999999999973
Q ss_pred ccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHH-------------Hhh------
Q 011570 245 VFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCAR-------------KMS------ 305 (483)
Q Consensus 245 ~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~-------------~~~------ 305 (483)
.. .+ .++... +..++++|++|.++.+..++|++++.++ +.+.+. .+.
T Consensus 256 --g~-~~-~~~~~~---------~~D~~~~s~~K~l~~gp~~~g~l~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 321 (465)
T 3e9k_A 256 --GN-VE-LYLHDW---------GVDFACWCSYKYLNAGAGGIAGAFIHEK-HAHTIKPALVGWFGHELSTRFKMDNKLQ 321 (465)
T ss_dssp --TT-SC-CCHHHH---------TCCEEEECSSSTTCCCTTCCCEEEECGG-GTTTSCCSSCCGGGBCHHHHTTCCSCCC
T ss_pred --CC-cC-Cchhhc---------CCCEEEECcccccccCCCceEEEEEcHH-HHhhcCCcccCccCCCCCcccccCCCcC
Confidence 22 11 233332 3457789999999323337899998543 322111 000
Q ss_pred ------h--cCCCChHHHHHHHHhcCChhHHHHH-HHHHHHHHHHHHHHHHHhhhc-----------CCceeecCC----
Q 011570 306 ------S--FGLVSSQTQHLIATMLSDDQFVEKF-IAESAKRIAERHKAFTWGLSQ-----------VGIGCLKSN---- 361 (483)
Q Consensus 306 ------~--~~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~l~~~~~~l~~~L~~-----------~gi~~~~~~---- 361 (483)
. .++.+.+...++.+.+.. +.+. +++.++++.++++++.+.|++ .|+++..|.
T Consensus 322 ~~~~~~~~~~gt~~~~~~~a~~aal~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~ 398 (465)
T 3e9k_A 322 LIPGVCGFRISNPPILLVCSLHASLEI---FKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEE 398 (465)
T ss_dssp BCSSGGGGCCSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGG
T ss_pred cCCChHHhccCCccHHHHHHHHHHHHH---HHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhh
Confidence 0 013344444444444432 2222 567777888888889888877 578887665
Q ss_pred ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEe-cc-CCHHHHHHHHHHHHHHHHHh
Q 011570 362 AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCF-AN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 362 ~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~-~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
.|.+++++++. +.. ++.+.|. ++||.+..+ .++++|+++ .. .+++++++++++|++++++.
T Consensus 399 ~g~~~~~~~~~--~~~------~l~~~L~-~~Gi~v~~~------~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 399 RGCQLTITFSV--PNK------DVFQELE-KRGVVCDKR------NPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSA 461 (465)
T ss_dssp BCSCEEEEECC--TTC------CHHHHHH-TTTEECEEE------TTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred cccEEEEEecC--CHH------HHHHHHH-HCCEEEecC------CCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence 35688888862 222 4566666 459998732 357999998 33 69999999999999988654
No 186
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.94 E-value=2e-25 Score=229.85 Aligned_cols=333 Identities=11% Similarity=0.047 Sum_probs=202.4
Q ss_pred CCCcccccchh--hhh--cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 45 PNGVIQMGLAE--NLL--CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 45 ~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
...+||++.+. +++ +++.+.+++.+... ....| .+..++++++++++.+.++ +++
T Consensus 56 g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~-------------~~~~~---~~~~~~~~~la~~l~~~~~-----~~~ 114 (453)
T 2cy8_A 56 GNVYLDFFGGHGALVLGHGHPRVNAAIAEALS-------------HGVQY---AASHPLEVRWAERIVAAFP-----SIR 114 (453)
T ss_dssp CCEEEESCTTTTSCTTCBTCHHHHHHHHHHHT-------------TTCSS---CSSCHHHHHHHHHHHHHCT-----TCS
T ss_pred CCEEEECcccHhhcccCCCCHHHHHHHHHHHH-------------hCCCC---CCCCHHHHHHHHHHHhhCC-----CCC
Confidence 34678888775 333 34555555543111 11122 2357899999999987642 578
Q ss_pred cEEEeCChhHHHHHHHHH---hcCCCCeEEEeCCCCcChHHHHhhhc----------CcE------EEEeecCCCCCccc
Q 011570 121 RIVMSGGATGAHETVAFC---LADPGDAFLVPTPYYPGFDRDLRWRT----------GVQ------LVPVVCDSSNDFKV 181 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~---l~~~gd~Vlv~~P~y~~~~~~~~~~~----------G~~------~~~v~~~~~~~~~~ 181 (483)
+|++|+|+++++..++.+ +.++ +.|++.+|+|+++...+.... |.. ++.++. .
T Consensus 115 ~v~~~~gg~eA~~~al~~ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~ 186 (453)
T 2cy8_A 115 KLRFTGSGTETTLLALRVARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------D 186 (453)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHCC-CEEEEECC----------------------------CGGGEEEECT-------T
T ss_pred EEEEeCCHHHHHHHHHHHHHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------C
Confidence 999999999999999987 6655 678888899987654332111 221 222221 3
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhh
Q 011570 182 TMEALEAAYEKAQESNIRIKGVLITNP-SNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEII 259 (483)
Q Consensus 182 d~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~ 259 (483)
|++.|++++++. +.++++ ++++| +||||.++ +.+++++|.++|++||+++|+||+|.++ +.+ .. .....+
T Consensus 187 d~~~le~~l~~~---~~~~~~-vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g-~~-~~~~~~- 258 (453)
T 2cy8_A 187 DIEGMREVFANH---GSDIAA-FIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVG-NH-GMQALL- 258 (453)
T ss_dssp CHHHHHHHHHHH---GGGEEE-EEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTC-TT-HHHHHH-
T ss_pred CHHHHHHHHHhc---CCCEEE-EEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccC-ch-hhhHHh-
Confidence 899999998752 125555 55666 57799765 7999999999999999999999999875 333 21 222112
Q ss_pred hhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH-------hhhcCCCChHHHHHHHHhcCC-hhHHHHH
Q 011570 260 DQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK-------MSSFGLVSSQTQHLIATMLSD-DQFVEKF 331 (483)
Q Consensus 260 ~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~-------~~~~~~~s~~~q~~~~~~l~~-~~~~~~~ 331 (483)
. .... +.||||.++ +|+|+||++++ +.+.+.+.. ....+..+++++.++.++++. .
T Consensus 259 ~-----~~~d---i~s~sK~l~-~G~~~G~v~~~-~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~------ 322 (453)
T 2cy8_A 259 D-----VQPD---LTCLAKASA-GGLPGGILGGR-EDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL------ 322 (453)
T ss_dssp T-----CCCS---EEEEEGGGG-TTSSCEEEEEC-HHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH------
T ss_pred C-----CCCc---EEEEChhhh-CCcceEEEech-HHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh------
Confidence 1 1122 238999998 69999999994 555554322 111234677888777666543 1
Q ss_pred HHHHHHHHHHHHHHHHHhhhc----CCceeecCCceEEEeeecCc-----h--hhc------cChHHHHHHHHHHHHhcC
Q 011570 332 IAESAKRIAERHKAFTWGLSQ----VGIGCLKSNAGLFLWMDLHH-----L--LKE------QTYEAEMALWRVIINEVK 394 (483)
Q Consensus 332 ~~~~~~~l~~~~~~l~~~L~~----~gi~~~~~~~g~f~~~~l~~-----~--~~~------~~~~~~~~~~~~Ll~~~g 394 (483)
.+...++++++++++.+.|++ .++....+..|.|+|++++. . ... .......+++..|++ +|
T Consensus 323 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~G 401 (453)
T 2cy8_A 323 EDDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALIL-EG 401 (453)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHH-TT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHH-CC
Confidence 011223344444555544443 35433233345688999874 1 000 011123467788875 59
Q ss_pred eEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhhc
Q 011570 395 LNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 395 V~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
|.+.|+ +.+|+++. .+++++++++++|++++++..+.
T Consensus 402 v~v~~~--------~~~~l~~~-~t~~~i~~~l~~l~~~l~~~~~~ 438 (453)
T 2cy8_A 402 VDIGGR--------GSVFLSAQ-HEREHVEHLVTTFDRVLDRLADE 438 (453)
T ss_dssp EECBTT--------TEEECCTT-CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEeCC--------CCEEeecc-CCHHHHHHHHHHHHHHHHHHHhC
Confidence 999653 24777654 69999999999999999876543
No 187
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.94 E-value=6.4e-25 Score=221.62 Aligned_cols=279 Identities=16% Similarity=0.191 Sum_probs=191.1
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH----hhhcCcEEEE
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----RWRTGVQLVP 170 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----~~~~G~~~~~ 170 (483)
...+|++.+|++++ . +++++++++++++..++.+++++||+|+++.|+|+++...+ +.. |.+++.
T Consensus 60 ~~~~l~~~la~~~g--------~--~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~-g~~~~~ 128 (389)
T 3acz_A 60 TVEQFEEMVCSIEG--------A--AGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRF-GIEVDL 128 (389)
T ss_dssp HHHHHHHHHHHHHT--------C--SEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHT-TCEEEE
T ss_pred HHHHHHHHHHHHhC--------C--CeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHc-CCEEEE
Confidence 35689999999875 2 26666777789999999999999999999999999876653 444 999999
Q ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCC
Q 011570 171 VVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKES 250 (483)
Q Consensus 171 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~ 250 (483)
++. .|++.+++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|..+.+. .
T Consensus 129 v~~-------~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~--~ 190 (389)
T 3acz_A 129 IDT-------SDVEKVKAAWKP------NTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFL--K 190 (389)
T ss_dssp ECT-------TCHHHHHHTCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC--C
T ss_pred ECC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccc--C
Confidence 885 378899888753 7899999999999999998 888899999999999999999865332 1
Q ss_pred CcchHHHhhhhccccCCCeEEEEecCccccCCCCceE-EEEEecChHHHHHHHHhhh-c-CCCChHHHHHHHHhcCChhH
Q 011570 251 SFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRV-GIIYSYNDQVVSCARKMSS-F-GLVSSQTQHLIATMLSDDQF 327 (483)
Q Consensus 251 ~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRi-G~li~~~~~l~~~~~~~~~-~-~~~s~~~q~~~~~~l~~~~~ 327 (483)
+ + ..+.++++.|+||.+|.+|.|+ ||++++++.+.+.+..... + ...++..+.++...+....
T Consensus 191 ~---~----------~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l~- 256 (389)
T 3acz_A 191 P---L----------ELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKTLP- 256 (389)
T ss_dssp G---G----------GTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHH-
T ss_pred c---c----------ccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccHHH-
Confidence 1 1 1245688999999999999998 9999965356555544332 3 3345566665555565421
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcC---------------CceeecC---CceEEEeeecCchhhccChHHHHHHHHHH
Q 011570 328 VEKFIAESAKRIAERHKAFTWGLSQV---------------GIGCLKS---NAGLFLWMDLHHLLKEQTYEAEMALWRVI 389 (483)
Q Consensus 328 ~~~~~~~~~~~l~~~~~~l~~~L~~~---------------gi~~~~~---~~g~f~~~~l~~~~~~~~~~~~~~~~~~L 389 (483)
.+.+...++...+.+.|+++ ++.+..+ ..|.++.+.++. . +....+
T Consensus 257 ------~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~--~--------~~~~~~ 320 (389)
T 3acz_A 257 ------IRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS--F--------EAAKKL 320 (389)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS--H--------HHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC--H--------HHHHHH
Confidence 12223334444455555443 1111111 123466677753 1 223455
Q ss_pred HHhcCeEeeC---C------CCCCC---------------CCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 390 INEVKLNVSP---G------SSFHC---------------PNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 390 l~~~gV~v~p---g------~~f~~---------------~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
+++.||.+++ | ..+.. ..++++|||++. ++.++.++.|.++++
T Consensus 321 l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~---~~~~~li~~l~~al~ 387 (389)
T 3acz_A 321 MEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGI---ENVDDIIADLKQALE 387 (389)
T ss_dssp HTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHT
T ss_pred HHhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHh
Confidence 6677888776 3 22211 125799999984 356777777777664
No 188
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.94 E-value=1.5e-24 Score=220.63 Aligned_cols=284 Identities=17% Similarity=0.157 Sum_probs=193.3
Q ss_pred cCCCC--CCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhh---h
Q 011570 89 IFQDY--HGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRW---R 163 (483)
Q Consensus 89 ~Y~~~--~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~---~ 163 (483)
.|+.. ....++++.++++++ .+++++|+|+++++..++.+++++||+|+++.|+|......+.. .
T Consensus 49 ~y~~~~~~~~~~l~~~la~~~g----------~~~~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~ 118 (412)
T 2cb1_A 49 VYARQKDPTAKALEERLKALEG----------ALEAVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSL 118 (412)
T ss_dssp SBTTTCCHHHHHHHHHHHHHHT----------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTT
T ss_pred CcCCCCChHHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHH
Confidence 45543 346788888888875 24899999999999999999999999999999999876665422 1
Q ss_pred cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 164 TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 164 ~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
.|.+++.++. |+++|++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|..
T Consensus 119 ~g~~~~~~~~--------~~~~l~~~i~~------~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~~~~~li~D~~~~~ 181 (412)
T 2cb1_A 119 MGVTVRYVDP--------EPEAVREALSA------KTRAVFVETVANPALLVPD---LEALATLAEEAGVALVVDNTFGA 181 (412)
T ss_dssp TTCEEEEECS--------SHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGT
T ss_pred cCCEEEEECC--------CHHHHHHHhcc------CCeEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcc
Confidence 4899988874 37888888753 7899999999999999998 88899999999999999999986
Q ss_pred CccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecC-h--------------------------H
Q 011570 244 TVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYN-D--------------------------Q 296 (483)
Q Consensus 244 ~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~-~--------------------------~ 296 (483)
..+.. . +. ..+.++++.|+||.++.+|.|+|++++.+ . .
T Consensus 182 ~~~~~-~---~~----------~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 247 (412)
T 2cb1_A 182 AGALC-R---PL----------AWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARC 247 (412)
T ss_dssp TTTSC-C---GG----------GGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGH
T ss_pred ccccC-C---cc----------ccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHH
Confidence 41211 1 11 12466889999999988999999988755 2 2
Q ss_pred HHHHHHHhh--hcC-CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceee-cC-----------
Q 011570 297 VVSCARKMS--SFG-LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCL-KS----------- 360 (483)
Q Consensus 297 l~~~~~~~~--~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~-~~----------- 360 (483)
+.+.++... .++ ..++....++...+.. +....++..++.+++.+.|.+. ++... .|
T Consensus 248 ~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~-------l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~ 320 (412)
T 2cb1_A 248 FPERVRTLGLSLCGMALSPFNAYLLFQGLET-------VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNA 320 (412)
T ss_dssp HHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG-------HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHH
T ss_pred HHHHHHHHHHHhcCCCCChHHhHHHHcCCch-------HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHH
Confidence 333333322 122 1233333332222321 2233334456677888888876 77633 22
Q ss_pred -----CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCC---------CCCC---------------CCCCEE
Q 011570 361 -----NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGS---------SFHC---------------PNPGWF 411 (483)
Q Consensus 361 -----~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~---------~f~~---------------~~~~~i 411 (483)
..+.++.+.+ . +. +....++++.||.+ .++ .+.. -.++.+
T Consensus 321 ~~~~~~~~~iv~~~~-~--~~-------~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~i 389 (412)
T 2cb1_A 321 RKYLASGGPILTLDL-G--DL-------ERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLV 389 (412)
T ss_dssp HHHCSSSCSEEEEEC-S--SH-------HHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEE
T ss_pred HHhCCCCceEEEEEe-C--CH-------HHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeE
Confidence 2344666777 3 11 22344566779998 774 2210 015789
Q ss_pred EEEecc-CCHHHHHHHHHHHH
Q 011570 412 RVCFAN-MDDRTMEIALSRIT 431 (483)
Q Consensus 412 Ris~~~-~~~e~l~~~l~~L~ 431 (483)
|+|++. .++++++.++++|+
T Consensus 390 R~s~g~~~~~~~i~~l~~al~ 410 (412)
T 2cb1_A 390 RVSVGLEDPLDLLALFEEALE 410 (412)
T ss_dssp EEECCSSCHHHHHHHHHHHHH
T ss_pred EEEeccCCHHHHHHHHHHHHh
Confidence 999986 36667777777665
No 189
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.94 E-value=2.9e-25 Score=226.75 Aligned_cols=328 Identities=13% Similarity=0.091 Sum_probs=205.8
Q ss_pred CCCcccccchh--hhh--cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 45 PNGVIQMGLAE--NLL--CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 45 ~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
...+||++.+. +++ +++.+.+++.+.. .....|+ +..++++++++.+.+.++ .++
T Consensus 51 g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~-------------~~~~~~~---~~~~~~~~l~~~l~~~~~-----~~~ 109 (424)
T 2e7u_A 51 GNRYLDYVMSWGPLILGHAHPKVLARVRETL-------------ERGLTFG---APSPLEVALAKKVKRAYP-----FVD 109 (424)
T ss_dssp CCEEEESSGGGTTCTTCBTCHHHHHHHHHHH-------------HTCSCCS---SCCHHHHHHHHHHHHHCT-----TCC
T ss_pred CCEEEEccccccccccCCCCHHHHHHHHHHH-------------HhCCCCC---CCCHHHHHHHHHHHHhCC-----CCC
Confidence 45578998775 444 3455555554311 0111121 235566666666665432 578
Q ss_pred cEEEeCChhHHHHHHHHH---hcCCCCeEEEeCCCCcChHHHHhhh-------------cCc------EEEEeecCCCCC
Q 011570 121 RIVMSGGATGAHETVAFC---LADPGDAFLVPTPYYPGFDRDLRWR-------------TGV------QLVPVVCDSSND 178 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~---l~~~gd~Vlv~~P~y~~~~~~~~~~-------------~G~------~~~~v~~~~~~~ 178 (483)
+|++|+|+++++..++.+ +.+ ++.|++.+|+|+++...+... .|+ +++.++.
T Consensus 110 ~v~~~~~g~ea~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~----- 183 (424)
T 2e7u_A 110 LVRFVNSGTEATMSALRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY----- 183 (424)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-----
T ss_pred EEEEeCCHHHHHHHHHHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-----
Confidence 999999999999999886 554 578999999998755432111 122 2444442
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEeCCCCC-CcCCC-CHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHH
Q 011570 179 FKVTMEALEAAYEKAQESNIRIKGVLITNPSNP-LGTFL-DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIA 256 (483)
Q Consensus 179 ~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NP-tG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~ 256 (483)
.|++.|++++++. +.+++ +++++|+|| ||.++ +.+++++|.++ ++||+++|+||+|.++ ..+ .. ...
T Consensus 184 --~d~~~le~~l~~~---~~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g-~~--~~~ 252 (424)
T 2e7u_A 184 --NDPEGLREVLKRR---GEEIA-AIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLA-FG--GAT 252 (424)
T ss_dssp --TCHHHHHHHHHHH---GGGEE-EEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSS-TT--HHH
T ss_pred --CCHHHHHHHHHhC---CCCEE-EEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccc-hh--HHH
Confidence 3789999988742 12444 566778665 89765 79999999999 9999999999999975 333 21 122
Q ss_pred HhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh-----hcCCCChHHHHHHHHhcCChhHHHHH
Q 011570 257 EIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS-----SFGLVSSQTQHLIATMLSDDQFVEKF 331 (483)
Q Consensus 257 ~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~-----~~~~~s~~~q~~~~~~l~~~~~~~~~ 331 (483)
+... ....+ .||||++| +|+|+||+++ ++.+.+.+.... ..+..+++++.++.++++.. ++
T Consensus 253 ~~~~-----~~~di---~s~sK~l~-~G~~~G~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~---~~- 318 (424)
T 2e7u_A 253 ELLG-----LKPDL---VTLGKILG-GGLPAAAYAG-RREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELL---EE- 318 (424)
T ss_dssp HHHT-----CCCSE---EEECGGGG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHH---HH-
T ss_pred HHhC-----CCcch---hhhhhhhh-CCcceEEEEE-cHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHH---Hh-
Confidence 2211 11222 39999999 6999999999 456655543311 12346778887777666421 11
Q ss_pred HHHHHHHHHHHHHHHHHhhhc----CCcee-ecCCceEEEeeecCchh-h------ccChHHHHHHHHHHHHhcCeEeeC
Q 011570 332 IAESAKRIAERHKAFTWGLSQ----VGIGC-LKSNAGLFLWMDLHHLL-K------EQTYEAEMALWRVIINEVKLNVSP 399 (483)
Q Consensus 332 ~~~~~~~l~~~~~~l~~~L~~----~gi~~-~~~~~g~f~~~~l~~~~-~------~~~~~~~~~~~~~Ll~~~gV~v~p 399 (483)
.++..++++++++++.+.|++ .++.. .++. |.|+|++++... . ........+++..|+ ++||.+.|
T Consensus 319 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~ 396 (424)
T 2e7u_A 319 NPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRV-GSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPP 396 (424)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEE-TTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEee-ceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEec
Confidence 123344555555666666654 35533 3444 468999987410 0 000112346777777 57999998
Q ss_pred CCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011570 400 GSSFHCPNPGWFRVCFANMDDRTMEIALSRITSF 433 (483)
Q Consensus 400 g~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~ 433 (483)
|.. ..+|+++. .+++++++++++|+++
T Consensus 397 ~~~------~~~~~~~~-~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 397 SNF------EAAFLSVA-HREEDVEKTLEALRKA 423 (424)
T ss_dssp SSS------SCEECCTT-CCHHHHHHHHHHHHHH
T ss_pred cCC------CceEeecc-CCHHHHHHHHHHHHHh
Confidence 752 24777754 6999999999999875
No 190
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.94 E-value=6.7e-25 Score=226.89 Aligned_cols=348 Identities=10% Similarity=0.027 Sum_probs=215.6
Q ss_pred CCCcccccch--hhhhc--HHHHHHHHhcCCCCccccccccccccccc-cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 45 PNGVIQMGLA--ENLLC--HELVEDWLMNNPKASICSAEGLNEFKGIA-IFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 45 ~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
...+||+..+ .+.++ ++.+.+++.+.. .... .|....+..+++.++++.+.+..+ .+.
T Consensus 54 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~-------------~~~~~~~~~~~~~~~~~~~lae~l~~~~~----~~~ 116 (472)
T 3hmu_A 54 GEEILDAMAGLWCVNIGYGRDELAEVAARQM-------------RELPYYNTFFKTTHVPAIALAQKLAELAP----GDL 116 (472)
T ss_dssp CCEEECTTHHHHTCTTCBCCHHHHHHHHHHH-------------HHCSCCCSSSSEECHHHHHHHHHHHHHSC----TTE
T ss_pred CCEEEECCCchhhccCCCCCHHHHHHHHHHH-------------HhccccccccccCCHHHHHHHHHHHHhCC----CCC
Confidence 4567898877 45554 355555544310 0111 222223345666667777666543 456
Q ss_pred CcEEEeCChhHHHHHHHHHhcC--------CCCeEEEeCCCCcChHHHHhhhcCc-----------EEEEeecCC--C-C
Q 011570 120 DRIVMSGGATGAHETVAFCLAD--------PGDAFLVPTPYYPGFDRDLRWRTGV-----------QLVPVVCDS--S-N 177 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~--------~gd~Vlv~~P~y~~~~~~~~~~~G~-----------~~~~v~~~~--~-~ 177 (483)
++|++++|+++++..++.++.. +++.|++.+|+|.++........|. .+..++.+. . +
T Consensus 117 ~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~ 196 (472)
T 3hmu_A 117 NHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEG 196 (472)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHC
T ss_pred CEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCC
Confidence 7999999999999999988864 4689999999998876554443221 233444221 0 1
Q ss_pred CcccC--------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccccccCccCC
Q 011570 178 DFKVT--------MEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYAATVFTK 248 (483)
Q Consensus 178 ~~~~d--------~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~ 248 (483)
++ .| ++.|++.+.+... .++++|++..++|++|.+. +.+.+++|.++|++||+++|+||+|.++...+
T Consensus 197 ~~-~~~~~~~~~~~~~le~~i~~~~~--~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G 273 (472)
T 3hmu_A 197 GD-MDPEEFGLARARELEEAILELGE--NRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTG 273 (472)
T ss_dssp TT-CCHHHHHHHHHHHHHHHHHHHCG--GGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS
T ss_pred cc-cCHHHHHHHHHHHHHHHHHhcCC--CCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccC
Confidence 11 23 7788888864211 2455555555567777755 88899999999999999999999998854443
Q ss_pred CCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh--h--hcCCCChHHHHHHHHhcCC
Q 011570 249 ESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM--S--SFGLVSSQTQHLIATMLSD 324 (483)
Q Consensus 249 ~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~--~--~~~~~s~~~q~~~~~~l~~ 324 (483)
. +...... . ....++ +|||++|.+|+|+||+++ ++.+.+.+... . ..+..++++++++.++|+.
T Consensus 274 -~-~~a~~~~-~-----v~pdi~---t~sK~l~gg~~plG~v~~-~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~ 341 (472)
T 3hmu_A 274 -N-WFGTQTM-G-----IRPHIM---TIAKGLSSGYAPIGGSIV-CDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRI 341 (472)
T ss_dssp -S-SCHHHHH-T-----CCCSEE---EECGGGTTTSSCCEEEEE-EHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHH
T ss_pred -c-cchhHHh-C-----CCCcee---eechhhhcCCcceEEEEE-CHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHH
Confidence 2 2232222 1 122332 789999855599999999 56666665211 1 1234678888888777752
Q ss_pred hhHHHHHHHHHHHHHH-HHHHHHHHhhhc---C-CceeecCCceEEEeeecCchhhcc-C-----hHHHHHHHHHHHHhc
Q 011570 325 DQFVEKFIAESAKRIA-ERHKAFTWGLSQ---V-GIGCLKSNAGLFLWMDLHHLLKEQ-T-----YEAEMALWRVIINEV 393 (483)
Q Consensus 325 ~~~~~~~~~~~~~~l~-~~~~~l~~~L~~---~-gi~~~~~~~g~f~~~~l~~~~~~~-~-----~~~~~~~~~~Ll~~~ 393 (483)
... +...+.++ ++.+++.+.|++ . .+....+.| .|+++++....... . ......++..+++ +
T Consensus 342 ~~~-----~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~ 414 (472)
T 3hmu_A 342 LEE-----ENILDHVRNVAAPYLKEKWEALTDHPLVGEAKIVG-MMASIALTPNKASRAKFASEPGTIGYICRERCFA-N 414 (472)
T ss_dssp HHH-----TTHHHHHHHTHHHHHHHHHHGGGGSTTEEEEEEET-TEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHH-T
T ss_pred HHH-----hHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC-ceEEEEEecCccccccccchhHHHHHHHHHHHHH-C
Confidence 110 12233334 444444444443 3 344455555 47777775321110 0 1113467777775 5
Q ss_pred CeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 394 KLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 394 gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
||.++|+. +++||+... .+++++++++++|++++++..
T Consensus 415 Gv~v~~~g-------~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 415 NLIMRHVG-------DRMIISPPLVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp TBCCEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999862 689999654 599999999999999987754
No 191
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.94 E-value=3.8e-25 Score=223.56 Aligned_cols=282 Identities=15% Similarity=0.093 Sum_probs=187.8
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH----HhhhcCcEEEE
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD----LRWRTGVQLVP 170 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~~G~~~~~ 170 (483)
+..++|+++|++++ .+ ++++++++++++..++. ++++||+|+++.|+|+..... ++. .|.+++.
T Consensus 56 ~~~~lr~~la~~~g--------~~--~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~-~G~~v~~ 123 (393)
T 1n8p_A 56 NRENLERAVAALEN--------AQ--YGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANA-HGVETSF 123 (393)
T ss_dssp HHHHHHHHHHHHTT--------CS--EEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTT-TCSCCEE
T ss_pred hHHHHHHHHHHHhC--------CC--cEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHH-cCcEEEE
Confidence 46799999999976 12 55555666999999999 999999999999999865543 334 3889888
Q ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc----CcEEEEccccccCcc
Q 011570 171 VVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK----NIHLVCDEIYAATVF 246 (483)
Q Consensus 171 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~----~~~iI~Deay~~~~~ 246 (483)
++.+ | ++++++++ +++++|++++||||||.+++ +++|+++|+++ |+++|+||+|..+.+
T Consensus 124 v~~~-------d-~~l~~~i~------~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~ 186 (393)
T 1n8p_A 124 TNDL-------L-NDLPQLIK------ENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYI 186 (393)
T ss_dssp ESSH-------H-HHHHHHSC------SSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHH
T ss_pred eCCC-------h-HHHHHhcc------cCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCcccccc
Confidence 8753 6 77877774 37899999999999999998 88888899999 999999999986543
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceE-EEEEecChHHHHHHHHhhh-c-CCCChHHHHHHHHhcC
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRV-GIIYSYNDQVVSCARKMSS-F-GLVSSQTQHLIATMLS 323 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRi-G~li~~~~~l~~~~~~~~~-~-~~~s~~~q~~~~~~l~ 323 (483)
.. ...+ +.++++.|+||.+|.+|+|+ ||+++.++.+.+.+..... + ...++..+.++...+.
T Consensus 187 ~~------~~~~---------~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 251 (393)
T 1n8p_A 187 SN------PLNF---------GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLK 251 (393)
T ss_dssp CC------GGGG---------TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred CC------HHHc---------CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccc
Confidence 21 1111 45688999999999999999 9999855666665544332 2 2345555554444444
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC--ce-eecC---------------C--c-eEEEeeecCchhhccChHHH
Q 011570 324 DDQFVEKFIAESAKRIAERHKAFTWGLSQVG--IG-CLKS---------------N--A-GLFLWMDLHHLLKEQTYEAE 382 (483)
Q Consensus 324 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g--i~-~~~~---------------~--~-g~f~~~~l~~~~~~~~~~~~ 382 (483)
. +....+...+++..+.+.|.+.+ +. +..| . . +..+++.++... .+.
T Consensus 252 ~-------~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~-----~~~ 319 (393)
T 1n8p_A 252 T-------LHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGA-----EAA 319 (393)
T ss_dssp T-------HHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCH-----HHH
T ss_pred h-------HHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcH-----HHH
Confidence 3 23334445566666777776653 32 2111 1 1 457888887410 112
Q ss_pred HHHHHHHHHhcCeEeeCCC----------CCC-----------CCCCCEEEEEeccC-CHHHHHHHHHHHHHH
Q 011570 383 MALWRVIINEVKLNVSPGS----------SFH-----------CPNPGWFRVCFANM-DDRTMEIALSRITSF 433 (483)
Q Consensus 383 ~~~~~~Ll~~~gV~v~pg~----------~f~-----------~~~~~~iRis~~~~-~~e~l~~~l~~L~~~ 433 (483)
..+...+ +..++.+..|+ .+. ...++.||||++.. ++++++.+.++|+++
T Consensus 320 ~~~l~~l-~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 320 SKFASST-RLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp HHHHHHC-SSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHhhC-CcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 2333332 22345554442 221 01247899999873 556667766666543
No 192
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.94 E-value=2.8e-24 Score=217.23 Aligned_cols=302 Identities=13% Similarity=0.119 Sum_probs=205.3
Q ss_pred CCCCCC--cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCc
Q 011570 90 FQDYHG--LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGV 166 (483)
Q Consensus 90 Y~~~~g--~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~ 166 (483)
|.+..| ..++|+++|++++ .++|++|+|+++++..++.++ +++||+|+++.|+|+.+...+... |+
T Consensus 26 ~~~~~g~~~~~l~~~la~~~~----------~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~~~~-g~ 94 (394)
T 1o69_A 26 YIAPLGEFVNRFEQSVKDYSK----------SENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICYL-KA 94 (394)
T ss_dssp TTSCTTHHHHHHHHHHHHHHC----------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHHHT-TC
T ss_pred CccCCChHHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHHHc-CC
Confidence 555557 8899999999986 268999999999999999999 999999999999999999988875 99
Q ss_pred EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccc-cCc
Q 011570 167 QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYA-ATV 245 (483)
Q Consensus 167 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~-~~~ 245 (483)
+++.++++ .+|.+|++.|++++.+. ..++++|++++ |||...+ +++|.++|+++|++||+||+|. +..
T Consensus 95 ~~~~v~~~--~~~~~d~~~l~~~i~~~---~~~~~~v~~~~---~~G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~ 163 (394)
T 1o69_A 95 KPVFIDCD--ETYNIDVDLLKLAIKEC---EKKPKALILTH---LYGNAAK---MDEIVEICKENDIVLIEDAAEALGSF 163 (394)
T ss_dssp EEEEECBC--TTSSBCHHHHHHHHHHC---SSCCCEEEEEC---GGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCE
T ss_pred EEEEEEeC--CCCCcCHHHHHHHHhcc---cCCceEEEEEC---CCCChhh---HHHHHHHHHHcCCEEEEECcCcccce
Confidence 99999987 36789999999998741 11578898885 8998766 8888888999999999999998 443
Q ss_pred cCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCC----------------
Q 011570 246 FTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGL---------------- 309 (483)
Q Consensus 246 ~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~---------------- 309 (483)
+.+ ....+ + .+ +.+.||||..+++|.|+||++++++.+.+.+......+.
T Consensus 164 ~~~-~~~~~---~--------~~--~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~ 229 (394)
T 1o69_A 164 YKN-KALGT---F--------GE--FGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYR 229 (394)
T ss_dssp ETT-EETTS---S--------SS--EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCB
T ss_pred eCC-ccccc---c--------cC--cEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcccC
Confidence 433 21111 1 12 345566544455678999999965676666655433221
Q ss_pred CChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC----ceE-EEeeecCchhh---------
Q 011570 310 VSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN----AGL-FLWMDLHHLLK--------- 375 (483)
Q Consensus 310 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~----~g~-f~~~~l~~~~~--------- 375 (483)
.+.....++...+ ++ +++..++++++++++.+.|.+. +++.++. +++ ++++.++....
T Consensus 230 ~~~~~aa~~l~~l---~~----l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 301 (394)
T 1o69_A 230 LSNVLGAIGVAQM---EV----LEQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRWLSTALINFDKNELNACQKDI 301 (394)
T ss_dssp CCHHHHHHHHHHH---TT----HHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEE
T ss_pred cCHHHHHHHHHHH---HH----HHHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeEEEEEEecchhhccccccccc
Confidence 1112211111112 22 3445667788888999999887 6665542 333 36677763100
Q ss_pred -----ccC-hHHHHHHHHHHHHhcCeEeeCCCCCCC-----CC----C---------CEEEEEecc-CCHHHHHHHHHHH
Q 011570 376 -----EQT-YEAEMALWRVIINEVKLNVSPGSSFHC-----PN----P---------GWFRVCFAN-MDDRTMEIALSRI 430 (483)
Q Consensus 376 -----~~~-~~~~~~~~~~Ll~~~gV~v~pg~~f~~-----~~----~---------~~iRis~~~-~~~e~l~~~l~~L 430 (483)
+.. -....++.+.|. ++||.+++|..+.. .. . ..+|+.... .++++++.++++|
T Consensus 302 ~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l 380 (394)
T 1o69_A 302 NISQKNITLHPKISKLIEDLK-NKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLI 380 (394)
T ss_dssp ECCCCCCCCCHHHHHHHHHHH-HTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHH
T ss_pred cccccccccccCHHHHHHHHH-HcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHH
Confidence 000 012336677665 56999999853210 00 0 234444433 6999999999999
Q ss_pred HHHHHH
Q 011570 431 TSFMLK 436 (483)
Q Consensus 431 ~~~l~~ 436 (483)
+++++.
T Consensus 381 ~~~~~~ 386 (394)
T 1o69_A 381 LKSIKA 386 (394)
T ss_dssp HHHHC-
T ss_pred HHHHhc
Confidence 887643
No 193
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.93 E-value=6.6e-25 Score=224.72 Aligned_cols=333 Identities=17% Similarity=0.108 Sum_probs=206.5
Q ss_pred CCCcccccchh--hhh--cHHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCC
Q 011570 45 PNGVIQMGLAE--NLL--CHELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPD 120 (483)
Q Consensus 45 ~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~ 120 (483)
...+||++.+. +.+ +++.+.+++.+... . .....| ..++++++++.+.+..+ .++
T Consensus 55 g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~----------~-~~~~~~-----~~~~~~~l~~~la~~~~-----~~~ 113 (434)
T 2epj_A 55 GARIVDLVLAYGPLILGHKHPRVLEAVEEALA----------R-GWLYGA-----PGEAEVLLAEKILGYVK-----RGG 113 (434)
T ss_dssp CCEEEESSGGGTTCTTCBTCHHHHHHHHHHHH----------T-CSCCSS-----CCHHHHHHHHHHHHHHC-----TTC
T ss_pred CCEEEEcccchhcccCCCCCHHHHHHHHHHHH----------h-CCCCCC-----CCHHHHHHHHHHHHhCC-----CCC
Confidence 45678998876 344 34555555543110 0 001122 24455555555554432 468
Q ss_pred cEEEeCChhHHHHHHHHH---hcCCCCeEEEeCCCCcChHHHHhh-------------hcCc------EEEEeecCCCCC
Q 011570 121 RIVMSGGATGAHETVAFC---LADPGDAFLVPTPYYPGFDRDLRW-------------RTGV------QLVPVVCDSSND 178 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~---l~~~gd~Vlv~~P~y~~~~~~~~~-------------~~G~------~~~~v~~~~~~~ 178 (483)
+|++|+|+++++..++.+ +. +++.|++.+|+|+++...+.. ..|+ +++.++.
T Consensus 114 ~v~~~~sgseA~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~----- 187 (434)
T 2epj_A 114 MIRFVNSGTEATMTAIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY----- 187 (434)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-----
T ss_pred EEEEeCCHHHHHHHHHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-----
Confidence 999999999999999987 44 457888889999875432210 0132 2444442
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHH
Q 011570 179 FKVTMEALEAAYEKAQESNIRIKGVLITNP-SNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIA 256 (483)
Q Consensus 179 ~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~ 256 (483)
.|++.|++++++. +.++++ ++++| +||||.++ +.+.+++|.++|++||+++|+||+|.++ ..+ .. .. .
T Consensus 188 --~d~~~le~~l~~~---~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g-~~-~~-~ 257 (434)
T 2epj_A 188 --NDVEALERVFAEY---GDRIAG-VIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLG-LE-GA-Q 257 (434)
T ss_dssp --TCHHHHHHHHHHH---GGGEEE-EEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSS-TT-HH-H
T ss_pred --CCHHHHHHHHHhC---CCCEEE-EEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCC-cc-hh-h
Confidence 2789999998752 125555 55556 57899876 7999999999999999999999999975 333 21 12 2
Q ss_pred HhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh-----hcCCCChHHHHHHHHhcCChhHHHHH
Q 011570 257 EIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS-----SFGLVSSQTQHLIATMLSDDQFVEKF 331 (483)
Q Consensus 257 ~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~-----~~~~~s~~~q~~~~~~l~~~~~~~~~ 331 (483)
+... .... +.||||.+| +|+|+||+++ ++.+.+.+.... ..+..+++++.++.++++.. ++
T Consensus 258 ~~~~-----~~~d---i~s~sK~l~-~G~~~G~v~~-~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~---~~- 323 (434)
T 2epj_A 258 GYFN-----IEGD---IIVLGKIIG-GGFPVGAVAG-SREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKAL---EE- 323 (434)
T ss_dssp HHHT-----CCCS---EEEEEGGGG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHH---HH-
T ss_pred HHhC-----CCCC---eeeecchhc-CCcceeeeee-cHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHH---Hh-
Confidence 2211 1122 249999999 5999999999 456655443311 11346777877776666421 11
Q ss_pred HHHHHHHHHHHHHHHHHhhhcC----CceeecCCceEEEeeecCch-hh------ccChHHHHHHHHHHHHhcCeEeeCC
Q 011570 332 IAESAKRIAERHKAFTWGLSQV----GIGCLKSNAGLFLWMDLHHL-LK------EQTYEAEMALWRVIINEVKLNVSPG 400 (483)
Q Consensus 332 ~~~~~~~l~~~~~~l~~~L~~~----gi~~~~~~~g~f~~~~l~~~-~~------~~~~~~~~~~~~~Ll~~~gV~v~pg 400 (483)
.+..++++++++++.+.|+++ ++....+..|.|+|++++.. .. ........+++..|++ +||.+.||
T Consensus 324 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~ 401 (434)
T 2epj_A 324 -EPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLR-RGVFIAPS 401 (434)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHH-TTEECCSS
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHH-CCeEEecc
Confidence 223444555556666666543 55432233456889988641 00 0001123467777774 69999987
Q ss_pred CCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHh
Q 011570 401 SSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 401 ~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~ 437 (483)
.. .++|+++. .+++++++++++|++++++.
T Consensus 402 ~~------~~~~~~~~-~t~e~i~~~l~~l~~~l~~~ 431 (434)
T 2epj_A 402 NL------EAVFTGLP-HQGEALEIAVEGLRSSLKTV 431 (434)
T ss_dssp TT------SCEECCTT-CSHHHHHHHHHHHHHHHHHH
T ss_pred CC------CcEEEecc-CCHHHHHHHHHHHHHHHHHH
Confidence 42 24777754 69999999999999998764
No 194
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.93 E-value=3.4e-25 Score=222.11 Aligned_cols=296 Identities=13% Similarity=0.190 Sum_probs=200.8
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcE
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQ 167 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~ 167 (483)
.|.+..+..++|+++|++++ .+++++++|+++++..++.++ +++||+|+++.|+|..+...+... |.+
T Consensus 31 ~~~~~~~~~~l~~~la~~~~----------~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~~~~-g~~ 99 (373)
T 3frk_A 31 WFILGDEDKKFEQEFADYCN----------VNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALAVSYT-GAK 99 (373)
T ss_dssp CCSSSHHHHHHHHHHHHHHT----------SSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHHHHHH-SCE
T ss_pred CccCCchHHHHHHHHHHHhC----------CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHc-CCE
Confidence 35555678999999999986 248999999999999999999 999999999999999999988876 999
Q ss_pred EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc-c
Q 011570 168 LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV-F 246 (483)
Q Consensus 168 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~-~ 246 (483)
++.++.+++ ++.+|++++++++.+ ++++|+ |+||||.+.+ +++|.++|+++|+++|+|++|+... +
T Consensus 100 ~~~~~~~~~-~~~~d~~~l~~~l~~------~~~~v~---~~n~~G~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~ 166 (373)
T 3frk_A 100 PIFVEPDIR-TYNIDPSLIESAITE------KTKAII---AVHLYGQPAD---MDEIKRIAKKYNLKLIEDAAQAHGSLY 166 (373)
T ss_dssp EEEECEETT-TTEECGGGTGGGCCT------TEEEEE---EECCTTCCCC---HHHHHHHHHHHTCEEEEECTTCTTCEE
T ss_pred EEEEecccc-ccCcCHHHHHHhcCC------CCeEEE---EECCCcCccc---HHHHHHHHHHcCCEEEEECCcccCCEE
Confidence 999998743 578999999988753 778777 7889999988 7788888999999999999997532 2
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCc--cccCCCCceEEEEEecChHHHHHHHHhhhcCC--------------C
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLS--KDMGFPGFRVGIIYSYNDQVVSCARKMSSFGL--------------V 310 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~S--K~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~--------------~ 310 (483)
.. .. +. . -..+++.||| |.+|..| +.|+++++++.+.+.+......+. .
T Consensus 167 ~~-~~------~~------~-~~d~~~~S~~~~K~l~~~g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~ 231 (373)
T 3frk_A 167 KG-MK------VG------S-LGDAAGFSFYPAKNLGSLG-DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRL 231 (373)
T ss_dssp TT-EE------TT------S-SSSEEEEECCTTSSSCCSS-SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCC
T ss_pred CC-Ee------cc------c-cccEEEEeCcCCCccCccc-eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCC
Confidence 22 11 10 0 1236677877 8886325 478999877777666655443211 2
Q ss_pred ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeec-CCceEEEeeecCchhhccChHHHHHHHHHH
Q 011570 311 SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLK-SNAGLFLWMDLHHLLKEQTYEAEMALWRVI 389 (483)
Q Consensus 311 s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~-~~~g~f~~~~l~~~~~~~~~~~~~~~~~~L 389 (483)
+.+...+....+. .+++..++.++..+++.+.|.+.++.+.. +.++...|..++-... +..++.+.|
T Consensus 232 ~~~~aa~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~L 299 (373)
T 3frk_A 232 DELQAGFLRVKLK-------YLDKWNEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRSE-----KRDELQKYL 299 (373)
T ss_dssp CHHHHHHHHHHHH-------THHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEES-----SHHHHHHHH
T ss_pred CHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhccCceEeccCCCCCceeeEEEEEEeC-----CHHHHHHHH
Confidence 3332222222121 12344455566677788888877644332 2222222221111000 123566666
Q ss_pred HHhcCeEeeCCCCCCC-----------C-C---------CCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 390 INEVKLNVSPGSSFHC-----------P-N---------PGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 390 l~~~gV~v~pg~~f~~-----------~-~---------~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
.+ +||.++++..... . . .+.+||++.. .++++++.+++.|+++..+
T Consensus 300 ~~-~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~ 367 (373)
T 3frk_A 300 NN-NGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLE 367 (373)
T ss_dssp HH-TTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred HH-CCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence 64 5999987641110 0 0 1579999976 6999999999999876544
No 195
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.93 E-value=9.6e-25 Score=226.85 Aligned_cols=324 Identities=15% Similarity=0.145 Sum_probs=219.8
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCc-----CCCcEEEeCChhHHHHHHHHHhcCC---------CC--------e-
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITF-----DPDRIVMSGGATGAHETVAFCLADP---------GD--------A- 145 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~-----~~~~i~it~G~~~al~~~~~~l~~~---------gd--------~- 145 (483)
.|....+..++++++++++.+.+|..... ...++++|+|+++++..++.++.++ || .
T Consensus 104 ~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~ 183 (486)
T 1js3_A 104 SWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKL 183 (486)
T ss_dssp SGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHE
T ss_pred ccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCE
Confidence 35444557899999999999888732100 1357899999999999888775321 43 3
Q ss_pred -EEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHH
Q 011570 146 -FLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDI 224 (483)
Q Consensus 146 -Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i 224 (483)
|+++.++|..+...++.. |++++.+|++ .++.+|+++|+++|.+..+.+..+.+|++++|+||||.+-+ +++|
T Consensus 184 ~v~~s~~~h~s~~~~~~~~-G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~---l~~I 257 (486)
T 1js3_A 184 VAYASDQAHSSVERAGLIG-GVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDN---LLEV 257 (486)
T ss_dssp EEEEETTCCHHHHHHHHHH-TCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHH
T ss_pred EEEECCCCcHHHHHHHHhC-CCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCC---HHHH
Confidence 888999999999988886 9999999986 36789999999999875444444568999999999999866 8899
Q ss_pred HHHHhhcCcEEEEccccccCccCCCCCcchH-HHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHH-HHHHH
Q 011570 225 VSFINEKNIHLVCDEIYAATVFTKESSFVSI-AEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQV-VSCAR 302 (483)
Q Consensus 225 ~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~-~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l-~~~~~ 302 (483)
+++|++||+++++|++|+...+.. +.+... ..+ . ..+ .+..+++|.++.| +++||+++.++.. .+.+.
T Consensus 258 ~~la~~~~~~lhvD~a~g~~~~~~-~~~~~~~~g~-~-----~ad--si~~~~hK~~~~p-~~~G~l~~~~~~~l~~~~~ 327 (486)
T 1js3_A 258 GPICHEEDIWLHVDAAYAGSAFIC-PEFRHLLNGV-E-----FAD--SFNFNPHKWLLVN-FDCSAMWVKRRTDLTGAFK 327 (486)
T ss_dssp HHHHHHTTCEEEEECTTGGGGGGS-TTTGGGGTTG-G-----GCS--EEEECHHHHSSCC-SSCEEEEESCHHHHHGGGC
T ss_pred HHHHHHcCCEEEEehhhHHHHHHC-HHHHHHhcCc-c-----ccC--eeEEchhhhcCCC-cceEEEEEeCHHHHHHHhc
Confidence 999999999999999998754433 222221 111 1 112 3456899999855 8999999976643 32221
Q ss_pred Hhhhc--------------------C--CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceeec
Q 011570 303 KMSSF--------------------G--LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLK 359 (483)
Q Consensus 303 ~~~~~--------------------~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~ 359 (483)
....+ . ....+.+.++...+. .+.+++..+++.++++++.+.|.+. |+++..
T Consensus 328 ~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 402 (486)
T 1js3_A 328 LDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG-----VKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCA 402 (486)
T ss_dssp ------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHCTTEEECS
T ss_pred CCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeC
Confidence 00000 0 012344444444432 2235666677788889999999887 888764
Q ss_pred -CCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc--CCHHHHHHHHHHHHHHHHH
Q 011570 360 -SNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN--MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 360 -~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~--~~~e~l~~~l~~L~~~l~~ 436 (483)
+..+++. ++++.. + ....++.+.|.++ |+.+..+..+. +.+++|++++. .+++++++++++|++++++
T Consensus 403 ~~~~~~v~-f~~~~~-~----~~~~~l~~~L~~~-g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 473 (486)
T 1js3_A 403 EVTLGLVC-FRLKGS-D----GLNEALLERINSA-RKIHLVPCRLR--GQFVLRFAICSRKVESGHVRLAWEHIRGLAAE 473 (486)
T ss_dssp CCCSSEEE-EEESSC-H----HHHHHHHHHHHHH-TSCBCEEEEET--TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCceeEEE-EEecCh-H----HHHHHHHHHHHhc-CCEEEEEEEEC--CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 5665444 455421 0 1123677777766 65433322232 35689999854 4889999999999999988
Q ss_pred hhhccC
Q 011570 437 NVEAKV 442 (483)
Q Consensus 437 ~~~~~~ 442 (483)
..++..
T Consensus 474 ~~~~~~ 479 (486)
T 1js3_A 474 LLAAEE 479 (486)
T ss_dssp HHC---
T ss_pred HHhhhc
Confidence 765543
No 196
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.93 E-value=2.3e-24 Score=224.93 Aligned_cols=322 Identities=11% Similarity=0.093 Sum_probs=222.8
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC--------CC-----C-eEEEeCCCCcC
Q 011570 90 FQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD--------PG-----D-AFLVPTPYYPG 155 (483)
Q Consensus 90 Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~--------~g-----d-~Vlv~~P~y~~ 155 (483)
|....+..++++++.+++.+.+| .+.+++++++|+|+++++..++.++.. +| + .|+++.++|+.
T Consensus 124 ~~~~~~~~~le~~~~~~la~~~g--~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s 201 (504)
T 2okj_A 124 YEIAPVFVLMEQITLKKMREIVG--WSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYS 201 (504)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHT--CCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH
T ss_pred hhhChHHHHHHHHHHHHHHHHhC--CCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHH
Confidence 44444556788888888888877 222278999999999999999988753 56 6 79999999999
Q ss_pred hHHHHhhhcCc---EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcC
Q 011570 156 FDRDLRWRTGV---QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKN 232 (483)
Q Consensus 156 ~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~ 232 (483)
+...+... |. +++.+|.++ ++.+|+++|+++|.+...++.++++|++++|+||||.+.+ +++|+++|+++|
T Consensus 202 ~~~~~~~~-g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~---l~~I~~la~~~g 275 (504)
T 2okj_A 202 IKKAGAAL-GFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKYN 275 (504)
T ss_dssp HHHHHHHT-TSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC---HHHHHHHHHHHT
T ss_pred HHHHHHHc-CCCcccEEEEecCC--CCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcC
Confidence 98888775 66 899999864 5789999999999876555657899999999999999987 888899999999
Q ss_pred cEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHH-HHHhhhcC---
Q 011570 233 IHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSC-ARKMSSFG--- 308 (483)
Q Consensus 233 ~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~-~~~~~~~~--- 308 (483)
+++++|++|+...+.. +.+.....-.. ...+++.|++|.++.| .++|++++.++.+... +.....+.
T Consensus 276 ~~lhvD~a~~~~~~~~-~~~~~~~~g~~-------~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~~~l~~~ 346 (504)
T 2okj_A 276 LWLHVDAAWGGGLLMS-RKHRHKLNGIE-------RANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCAGYLFQP 346 (504)
T ss_dssp CEEEEEETTGGGGGGC-TTTGGGGTTGG-------GCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCSSSCCS
T ss_pred CEEEEehhhhhHHHhC-HhhHhhcCCcc-------cCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcCCCccccCC
Confidence 9999999998765543 22212111011 2235677999998854 7899999966544332 21111111
Q ss_pred C-------------------CChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceeec---CCceEE
Q 011570 309 L-------------------VSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLK---SNAGLF 365 (483)
Q Consensus 309 ~-------------------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~---~~~g~f 365 (483)
. ..++.+.++..++.. +.+++..++..++++++.+.|++. |+++.. |..+++
T Consensus 347 ~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~-----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v 421 (504)
T 2okj_A 347 DKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGT-----VGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNV 421 (504)
T ss_dssp CCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCE
T ss_pred cccccCcCCcccCCCCCCCCccHHHHHHHHHHhhH-----HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEE
Confidence 0 124445455444432 234566677788889999999987 888774 677777
Q ss_pred EeeecCchhhc----cCh-----HHHHHHHHHHHHhcCe-EeeCCCCCCCCCCCEEEEEecc--CCHHHHHHHHHHHHHH
Q 011570 366 LWMDLHHLLKE----QTY-----EAEMALWRVIINEVKL-NVSPGSSFHCPNPGWFRVCFAN--MDDRTMEIALSRITSF 433 (483)
Q Consensus 366 ~~~~l~~~~~~----~~~-----~~~~~~~~~Ll~~~gV-~v~pg~~f~~~~~~~iRis~~~--~~~e~l~~~l~~L~~~ 433 (483)
++...+..... ... .....+.+.|.++ |+ .+.++. +. ...+++|+++++ +++++++.++++|+++
T Consensus 422 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~-~~-~~~~~lRis~~~~~~t~edi~~~~~~l~~~ 498 (504)
T 2okj_A 422 CFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMES-GTTMVGYQP-QG-DKANFFRMVISNPAATQSDIDFLIEEIERL 498 (504)
T ss_dssp EEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHH-TSCEEEEEE-ET-TEEEEEEECCCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEeCccccccccchhhHHHHHHHHHHHHHHHHhC-CcEEEEeeE-EC-CceEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 66544432100 000 0123567777765 75 444332 32 123589999973 5899999999999887
Q ss_pred HHH
Q 011570 434 MLK 436 (483)
Q Consensus 434 l~~ 436 (483)
.++
T Consensus 499 ~~~ 501 (504)
T 2okj_A 499 GQD 501 (504)
T ss_dssp HTC
T ss_pred HHH
Confidence 654
No 197
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.93 E-value=1.9e-24 Score=216.37 Aligned_cols=289 Identities=17% Similarity=0.231 Sum_probs=201.5
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcE
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQ 167 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~ 167 (483)
.|.+..+..++++++|++++ .+++++++|+++++..++.++ +++||+|+++.|+|..+...+... |.+
T Consensus 30 ~~~~~~~~~~l~~~la~~~~----------~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~~~~-G~~ 98 (367)
T 3nyt_A 30 QYILGPEVTELEDRLADFVG----------AKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETVALL-GAK 98 (367)
T ss_dssp CCSSCHHHHHHHHHHHHHHT----------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHT-TCE
T ss_pred CccCChHHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHHHHc-CCE
Confidence 35455568899999999986 238999999999999999999 899999999999999999988876 999
Q ss_pred EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC-cc
Q 011570 168 LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT-VF 246 (483)
Q Consensus 168 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~-~~ 246 (483)
++.++++++ ++.+|++.+++++++ ++++|+ |+||||...+ +++|.++|+++|++||+|++|+.. .+
T Consensus 99 ~~~~~~~~~-~~~~d~~~l~~~i~~------~~~~v~---~~~~~G~~~~---~~~i~~la~~~~~~li~D~a~~~g~~~ 165 (367)
T 3nyt_A 99 PVYVDIDPR-TYNLDPQLLEAAITP------RTKAII---PVSLYGQCAD---FDAINAIASKYGIPVIEDAAQSFGASY 165 (367)
T ss_dssp EEEECBCTT-TCSBCGGGTGGGCCT------TEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCCBEEECTTTTTCEE
T ss_pred EEEEecCCc-cCCcCHHHHHHhcCc------CCcEEE---eeCCccChhh---HHHHHHHHHHcCCEEEEECccccCCeE
Confidence 999998753 478999999998853 778776 8899998887 788888899999999999999742 22
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecC--ccccCCCCceEEEEEecChHHHHHHHHhhhc--------------CCC
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSL--SKDMGFPGFRVGIIYSYNDQVVSCARKMSSF--------------GLV 310 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~--SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~--------------~~~ 310 (483)
.+ ... . ... .+++.|| +|.+|.+|. .|+++++++.+.+.+...... ...
T Consensus 166 ~~-~~~---~---------~~~-di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~ 230 (367)
T 3nyt_A 166 KG-KRS---C---------NLS-TVACTSFFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRL 230 (367)
T ss_dssp TT-EET---T---------SSS-SEEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCC
T ss_pred CC-eec---c---------CCC-CEEEEECCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCc
Confidence 22 111 0 112 4677887 899985577 899999777777776654332 224
Q ss_pred ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecC-Cce----EEEeeecCchhhccChHHHHHH
Q 011570 311 SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKS-NAG----LFLWMDLHHLLKEQTYEAEMAL 385 (483)
Q Consensus 311 s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~-~~g----~f~~~~l~~~~~~~~~~~~~~~ 385 (483)
+.+...++...+.. +++..++.++..+++.+.|.+.++.+... .++ +++++.++. ...+
T Consensus 231 ~~~~aa~~~~~l~~-------~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l 294 (367)
T 3nyt_A 231 DTLQAAILLPKLEI-------FEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMDN---------RESV 294 (367)
T ss_dssp CHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECSS---------HHHH
T ss_pred cHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeCC---------HHHH
Confidence 44444444333322 22333444555667777787776544322 221 123333331 2256
Q ss_pred HHHHHHhcCeEeeCCCC--------CC-CCC---------CCEEEEEecc-CCHHHHHHHHHHHHHH
Q 011570 386 WRVIINEVKLNVSPGSS--------FH-CPN---------PGWFRVCFAN-MDDRTMEIALSRITSF 433 (483)
Q Consensus 386 ~~~Ll~~~gV~v~pg~~--------f~-~~~---------~~~iRis~~~-~~~e~l~~~l~~L~~~ 433 (483)
.+.|. ++||.++++.. |. ... ...+||++.. .++++++.+++.|++.
T Consensus 295 ~~~L~-~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 295 QASLK-AAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp HHHHH-HHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred HHHHH-HCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 66665 45999887642 10 000 2369999965 6999999999998764
No 198
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.93 E-value=1.6e-24 Score=225.75 Aligned_cols=316 Identities=12% Similarity=0.028 Sum_probs=217.9
Q ss_pred CCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEE---EeCChhHHHHHHHHHhcCC--------CC-----eEEEeCCCCcC
Q 011570 92 DYHGLPEFRNAVAKFMGKVRGNRITFDPDRIV---MSGGATGAHETVAFCLADP--------GD-----AFLVPTPYYPG 155 (483)
Q Consensus 92 ~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~---it~G~~~al~~~~~~l~~~--------gd-----~Vlv~~P~y~~ 155 (483)
.+.+..++++.+.+++.+.+| .+.+++++. +|+|+++++..++.++..+ |+ .|+++.++|..
T Consensus 89 ~~p~~~~le~~~~~~la~l~g--~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s 166 (502)
T 3hbx_A 89 EYPVTTELQNRCVNMIAHLFN--APLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVC 166 (502)
T ss_dssp TCHHHHHHHHHHHHHHHHHTT--CCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHH
T ss_pred cChhHHHHHHHHHHHHHHHhC--CCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHH
Confidence 334567888888888888877 332355554 4999999999998887655 76 89999999999
Q ss_pred hHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc----
Q 011570 156 FDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK---- 231 (483)
Q Consensus 156 ~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~---- 231 (483)
+...++.. |++++.+++++ ++|.+|+++|++++.+ ++++|++++|+||||.+.+ +++|.++|+++
T Consensus 167 ~~~~~~~~-G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~ 235 (502)
T 3hbx_A 167 WEKFARYF-EVELKEVKLSE-GYYVMDPQQAVDMVDE------NTICVAAILGSTLNGEFED---VKLLNDLLVEKNKET 235 (502)
T ss_dssp HHHHHHHT-TCEEEEECCBT-TBCSCCHHHHHHHCCT------TEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHc-CceeEEEecCC-CcCcCCHHHHHHHHhh------CCEEEEEecCCCCCCcccC---HHHHHHHHHHhhhcc
Confidence 99988876 99999999865 3588999999999864 7889999999999999988 77777888888
Q ss_pred --CcEEEEccccccCcc--CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHH-HHHHHhhh
Q 011570 232 --NIHLVCDEIYAATVF--TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVV-SCARKMSS 306 (483)
Q Consensus 232 --~~~iI~Deay~~~~~--~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~-~~~~~~~~ 306 (483)
|+++++|++|+++.. .. ........ .....++..|.+|.++ ++.++||++..++... ..+.....
T Consensus 236 ~~~~~l~VD~A~~~~~~p~~~-~~~~~~~~--------~~~~D~v~~s~hK~l~-~p~g~G~~~~~~~~~l~~~~~~~~~ 305 (502)
T 3hbx_A 236 GWDTPIHVDAASGGFIAPFLY-PELEWDFR--------LPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELIFHIN 305 (502)
T ss_dssp CCCCCEEEECTTGGGTHHHHC-TTCCCSTT--------STTEEEEEEETTTTTC-CCSSCEEEEESSGGGSCGGGCEEEC
T ss_pred CCCCeEEEECCccchhhhhhC-cccccccC--------CCCceEEEECcccccC-CCCCeEEEEEeCHHHhhHHhccCcc
Confidence 999999999986431 11 11111000 1244566778999764 7788999988654432 21110011
Q ss_pred c-----------CCC---ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-ceeecC-CceEEEeeec
Q 011570 307 F-----------GLV---SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVG-IGCLKS-NAGLFLWMDL 370 (483)
Q Consensus 307 ~-----------~~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-i~~~~~-~~g~f~~~~l 370 (483)
+ +.. ...++.++...+... .+.+..++..++++++.+.|.+++ +++..+ ....++.+++
T Consensus 306 yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~-----g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~ 380 (502)
T 3hbx_A 306 YLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHE-----GYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSL 380 (502)
T ss_dssp SSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEE
T ss_pred cccCCCCCccccCCchHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEe
Confidence 1 000 122333333333222 235556667778889999999985 888765 3445777887
Q ss_pred CchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC-CCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhhc
Q 011570 371 HHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC-PNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVEA 440 (483)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~-~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~~ 440 (483)
+.... . ...++.+.|. +.||.+........ .+..++||+++. .++++++.+++.|+++++..++.
T Consensus 381 ~~~~~---~-~~~~l~~~L~-~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~~l~~~ 447 (502)
T 3hbx_A 381 KDSSC---H-TEFEISDMLR-RYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDEL 447 (502)
T ss_dssp SSCSS---C-CHHHHHHHHH-TTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCc---C-CHHHHHHHHH-hCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 64211 1 1225666666 56998754432221 234689999976 59999999999999999887655
No 199
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.93 E-value=8.6e-25 Score=222.78 Aligned_cols=280 Identities=18% Similarity=0.170 Sum_probs=186.5
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH----HHhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR----DLRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~----~~~~~~G~~~~~v 171 (483)
..+|++.+|++++ .+..++++++++++..++.+++++||+|+++.|+|..+.. .+... |++++.+
T Consensus 84 ~~~le~~lA~l~g----------~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~-G~~~~~v 152 (430)
T 3ri6_A 84 VEDLEQRLKNLTG----------ALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSF-GIEVRFV 152 (430)
T ss_dssp HHHHHHHHHHHHT----------CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHT-TCEEEEE
T ss_pred HHHHHHHHHHHHC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHc-CCEEEEe
Confidence 5677778887765 2335666666799999999999999999999999988877 44554 9999998
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+.+ |++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+...+..
T Consensus 153 ~~~-------d~~~l~~ai~~------~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~~--- 213 (430)
T 3ri6_A 153 DVM-------DSLAVEHACDE------TTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLLE--- 213 (430)
T ss_dssp CTT-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTCC---
T ss_pred CCC-------CHHHHHHhhCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCC---
Confidence 864 78999988853 7999999999999999998 7788999999999999999997533211
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEe--cChHH------------------HHHHHH--hhhcCC
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYS--YNDQV------------------VSCARK--MSSFGL 309 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~--~~~~l------------------~~~~~~--~~~~~~ 309 (483)
+ .. .+.++++.|+||.+|.+|..+|.+++ .+..+ ...... ....+.
T Consensus 214 --~-~~---------~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~ 281 (430)
T 3ri6_A 214 --A-KR---------LGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGP 281 (430)
T ss_dssp --G-GG---------GTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCC
T ss_pred --h-HH---------cCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCC
Confidence 1 11 13457899999999867665554444 22111 111111 122232
Q ss_pred -CChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cce-eecCC----------------ceEEEeeec
Q 011570 310 -VSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIG-CLKSN----------------AGLFLWMDL 370 (483)
Q Consensus 310 -~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~-~~~~~----------------~g~f~~~~l 370 (483)
.++.....+ +.. .+.+..+.++..++...+.+.|++. +++ +..|. ||+.+|+++
T Consensus 282 ~~~~~~a~l~---l~~----l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l 354 (430)
T 3ri6_A 282 SLSPHNAYLQ---SLG----LETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFEL 354 (430)
T ss_dssp CCCHHHHHHH---HHH----HHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEC
T ss_pred CCCHHHHHHH---Hhh----hhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEE
Confidence 333222221 111 1223444556677888888999877 554 44443 565899999
Q ss_pred CchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC---------------------CCCCEEEEEeccCCHHHHHHHHHH
Q 011570 371 HHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC---------------------PNPGWFRVCFANMDDRTMEIALSR 429 (483)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~---------------------~~~~~iRis~~~~~~e~l~~~l~~ 429 (483)
+.. .+...|...+. ..++.+.+|..+.. ..+++||||++. |+.+.+++.
T Consensus 355 ~~~------~~~~~~~~~l~-~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~---E~~~dl~~d 424 (430)
T 3ri6_A 355 ESK------EASYRFMDALK-LIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI---EEIEDLKED 424 (430)
T ss_dssp SSH------HHHHHHHHHCS-SSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS---SCHHHHHHH
T ss_pred CCH------HHHHHHHHhCC-cceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHH
Confidence 732 12224444332 34666777776541 135789999984 445566666
Q ss_pred HHHHH
Q 011570 430 ITSFM 434 (483)
Q Consensus 430 L~~~l 434 (483)
|++++
T Consensus 425 l~~al 429 (430)
T 3ri6_A 425 ILQAL 429 (430)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 66654
No 200
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.93 E-value=2.4e-24 Score=220.25 Aligned_cols=342 Identities=11% Similarity=0.054 Sum_probs=197.7
Q ss_pred CCCCcccccchh--hhhc--HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 44 NPNGVIQMGLAE--NLLC--HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 44 ~~~~~i~l~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
+...++|+..+. +.++ ++.+.+++.+.... . ....|+ .+...++++.+.+..+ .+
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~----------~-~~~~~~-----~~~~~~la~~l~~~~~-----~~ 109 (429)
T 4e77_A 51 DGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVER----------G-LSFGAP-----TEMEVKMAQLVTDLVP-----TM 109 (429)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTT----------C-SCCSSC-----CHHHHHHHHHHHHHST-----TC
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHh----------C-cccCCC-----CHHHHHHHHHHHhhCC-----CC
Confidence 345678888775 3332 45555555431110 0 011232 2344444444443322 47
Q ss_pred CcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcCcEE--EEeecCCCC------C---c-ccCHHH
Q 011570 120 DRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGVQL--VPVVCDSSN------D---F-KVTMEA 185 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G~~~--~~v~~~~~~------~---~-~~d~~~ 185 (483)
++|++|+|+++++..++.... .+++.|++.+++|+++........|... ...+....- . + ..|++.
T Consensus 110 ~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 189 (429)
T 4e77_A 110 DMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLAS 189 (429)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHH
T ss_pred CEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHH
Confidence 899999999999999987543 3567899999999876542221111111 111110000 0 0 017899
Q ss_pred HHHHHHHHHhcCCceeEEEEeCCCCCCcCCC--CHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhcc
Q 011570 186 LEAAYEKAQESNIRIKGVLITNPSNPLGTFL--DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDI 263 (483)
Q Consensus 186 l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~--~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~ 263 (483)
|++++++. +.++ ++++++|+||+|.++ +.+.+++|.++|++||+++|+||+|.++ ..+ .. .....+ .
T Consensus 190 le~~l~~~---~~~~-~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g-~~-~~~~~~-~--- 258 (429)
T 4e77_A 190 VRQAFEQY---PQEV-ACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVA-LA-GAQDYY-H--- 258 (429)
T ss_dssp HHHHHHHS---TTTE-EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTB-TT-CHHHHT-T---
T ss_pred HHHHHHhc---CCCE-EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccC-cc-hHHHhc-C---
Confidence 99988752 1244 456678876665443 3556999999999999999999999975 333 22 222222 1
Q ss_pred ccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh-----hhcCCCChHHHHHHHHhcC---ChhHHHHHHHHH
Q 011570 264 ACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM-----SSFGLVSSQTQHLIATMLS---DDQFVEKFIAES 335 (483)
Q Consensus 264 ~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~-----~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~ 335 (483)
.... +.||||.+| +|+|+||+++ ++.+.+.+... ...+..+++++.++.++++ +.++ .++.
T Consensus 259 --~~pd---i~t~sK~~~-~G~~~G~~~~-~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~----~~~~ 327 (429)
T 4e77_A 259 --VIPD---LTCLGKIIG-GGMPVGAFGG-RREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGV----YETL 327 (429)
T ss_dssp --CCCS---EEEEEGGGG-TTSCCEEEEE-CHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTH----HHHH
T ss_pred --CCCC---eeeeccccc-CCCCeEEEEE-CHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCH----HHHH
Confidence 1122 249999999 8999999999 56665554331 1223477888887766664 3332 2222
Q ss_pred HHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhcc--------ChHHHHHHHHHHHHhcCeEeeCCCCCCCCC
Q 011570 336 AKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQ--------TYEAEMALWRVIINEVKLNVSPGSSFHCPN 407 (483)
Q Consensus 336 ~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~--------~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~ 407 (483)
++.....++.+.+.+.+.++....+..|+|+|++++...... ......+++..|+++ ||.++|+..
T Consensus 328 ~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~----- 401 (429)
T 4e77_A 328 TELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEE-GVYLAPSAF----- 401 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHT-TEECCSSTT-----
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHC-CeEEeecCC-----
Confidence 222222233344444445655455556679999987531000 011224677777754 999998742
Q ss_pred CCEEEEEeccCCHHHHHHHHHHHHHHHHH
Q 011570 408 PGWFRVCFANMDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 408 ~~~iRis~~~~~~e~l~~~l~~L~~~l~~ 436 (483)
..+|+++. .+++++++++++|++++++
T Consensus 402 -~~~~~~~~-~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 402 -EAGFMSLA-HSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp -SCEECCTT-CCHHHHHHHHHHHHHHHTT
T ss_pred -CCEEEecc-CCHHHHHHHHHHHHHHHHh
Confidence 34677654 6999999999999998753
No 201
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.93 E-value=1.3e-25 Score=230.59 Aligned_cols=287 Identities=14% Similarity=0.059 Sum_probs=189.2
Q ss_pred CCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEe
Q 011570 92 DYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPV 171 (483)
Q Consensus 92 ~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v 171 (483)
+.....++++.+|+ ++ .+ +++++|+|+++++..++.+++++||+|+++.|+|..+...+... |++++.+
T Consensus 55 ~~~~~~~~~~~la~-~g--------~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~-G~~~~~v 123 (446)
T 2x3l_A 55 PEEVILKSMKQVEK-HS--------DY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDIS-QQEGHFI 123 (446)
T ss_dssp CSSHHHHHHHHHCS-CT--------TE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHH-TCCEEEC
T ss_pred cchHHHHHHHHHHh-cC--------CC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHc-CCeEEEE
Confidence 33446788888887 65 23 68999999999999999999999999999999999999988876 9999999
Q ss_pred ec--CCCCC--cccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccccc-Ccc
Q 011570 172 VC--DSSND--FKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAA-TVF 246 (483)
Q Consensus 172 ~~--~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~-~~~ 246 (483)
+. +++.+ +.+|++.| +. +++++|++++ .|+||.+++ +++|+++|+++|+++|+||+|+. +.|
T Consensus 124 ~~~~~~~~~~~~~~d~~~l---~~------~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f 190 (446)
T 2x3l_A 124 ETHQSPLTNHYNKVNLSRL---NN------DGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGL 190 (446)
T ss_dssp EEEECTTTSSEEEEEC----------------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTS
T ss_pred eCeeccccCcCCCCCHHHH---cC------CCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhcc
Confidence 87 43211 56788877 22 3789999999 455999999 78899999999999999999986 224
Q ss_pred CCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHH-HHHHH-hhhc--CCCChHHHHHHHHhc
Q 011570 247 TKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVV-SCARK-MSSF--GLVSSQTQHLIATML 322 (483)
Q Consensus 247 ~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~-~~~~~-~~~~--~~~s~~~q~~~~~~l 322 (483)
.+ . ..+...+ +..+++.|+||+++ ++.++||++++++.+. ..+.. ...+ +..+.....++..++
T Consensus 191 ~~-~-~~~~~~~---------g~Di~~~S~~K~l~-~~~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~ 258 (446)
T 2x3l_A 191 QG-F-PDSTLNY---------QADYVVQSFHKTLP-ALTMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAA 258 (446)
T ss_dssp TT-S-CCCGGGG---------TCSEEEECHHHHSS-SCTTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHH
T ss_pred CC-C-CCChHHc---------CCCEEEECCccccc-cccccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHH
Confidence 43 2 2333322 22378899999653 3345799999655332 12221 1111 223333222222222
Q ss_pred CChhHHHHHH-HHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEee-CC
Q 011570 323 SDDQFVEKFI-AESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVS-PG 400 (483)
Q Consensus 323 ~~~~~~~~~~-~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~-pg 400 (483)
.+++... ++..++..+..+++.+. |+++..+..+.++|++++. .+ ..++.+.|.++ ||.+. +|
T Consensus 259 ---~~l~~~g~~~~~~~~~~l~~~l~~~----g~~~~~~~~~~~l~i~~~~-~~------~~~l~~~L~~~-GI~v~~~g 323 (446)
T 2x3l_A 259 ---QFYKTYDSTLFFAKRAQLIECLENK----GFEMLQVDDPLKLLIKYEG-FT------GHDIQNWFMNA-HIYLELAD 323 (446)
T ss_dssp ---HHHHHCCCHHHHHHHHHHHHHHHHH----TCEEEECSSTTEEEEECTT-SC------HHHHHHHHHHT-TEEESEEC
T ss_pred ---HHHHHhCHHHHHHHHHHHHHHHHHc----CCEECcCCCCeEEEEEeCC-cC------HHHHHHHHHHC-CCEEEecC
Confidence 1111110 11233333444444443 7877766555689998872 11 23667777765 99987 44
Q ss_pred CCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 401 SSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 401 ~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
.+++|++++. .+++++ +++++|+++++..
T Consensus 324 -------~~~iRi~~~~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 324 -------DYQALAILPLWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp -------SSCEEEECCCCCTTCCC-CHHHHHHHHHTCC
T ss_pred -------CCEEEEEeecCCCHHHH-HHHHHHHHHHHhh
Confidence 2579999975 488889 9999999987654
No 202
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.92 E-value=1.8e-24 Score=222.57 Aligned_cols=294 Identities=14% Similarity=0.071 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc---C----------C-CCeEEEeCCCCcChHHHHhh
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA---D----------P-GDAFLVPTPYYPGFDRDLRW 162 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~---~----------~-gd~Vlv~~P~y~~~~~~~~~ 162 (483)
.++++.++++++ ...+++|++|+|+++++..++.++. . + ||.|++.+|+|+++......
T Consensus 104 ~~la~~la~~~~-------~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~ 176 (449)
T 2cjg_A 104 ARFVETFARVLG-------DPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLS 176 (449)
T ss_dssp HHHHHHHHHHHC-------CTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGG
T ss_pred HHHHHHHHHhcC-------CCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhh
Confidence 445555555543 1357899999999999999987543 2 2 89999999999876543222
Q ss_pred hcC--------c-----EEEEeecCCCCCc--------ccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCc-CCCCHHH
Q 011570 163 RTG--------V-----QLVPVVCDSSNDF--------KVTMEALEAAYEKAQESNIRIKGVLITNPSNPLG-TFLDRET 220 (483)
Q Consensus 163 ~~G--------~-----~~~~v~~~~~~~~--------~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG-~~~~~~~ 220 (483)
..| . +++.+|.++.+.. ..+++.|++++++. +.++++|+++.++|||| .+++.++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~---~~~~~~vi~ep~~~~~G~~~~~~~~ 253 (449)
T 2cjg_A 177 LTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETR---PHDIACFVAEPIQGEGGDRHFRPEF 253 (449)
T ss_dssp TCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHS---TTTEEEEEECSEETTTTCEECCHHH
T ss_pred hcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhc---CCceEEEEEeCcCCCCCCccCCHHH
Confidence 112 1 4556665431011 24566788887642 23676655443378999 5899999
Q ss_pred HHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHH
Q 011570 221 LKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSC 300 (483)
Q Consensus 221 l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~ 300 (483)
+++|.++|++||+++|+||+|.++.+.+ . +.+...+ . ....+ .||||.+ |+||++++ +.+.+.
T Consensus 254 l~~l~~l~~~~g~lli~DEv~~g~g~~g-~-~~~~~~~-~-----~~~di---~t~sK~l-----~iG~~~~~-~~~~~~ 316 (449)
T 2cjg_A 254 FAAMRELCDEFDALLIFDEVQTGCGLTG-T-AWAYQQL-D-----VAPDI---VAFGKKT-----QVCGVMAG-RRVDEV 316 (449)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTTTS-S-SSTHHHH-T-----CCCSE---EEECGGG-----SSEEEEEC-GGGGGS
T ss_pred HHHHHHHHHHCCcEEEEeccccCCCccC-c-ceeeccc-C-----CCceE---EEecCcc-----cEEEEEEC-HHHhhh
Confidence 9999999999999999999999764544 2 2232222 1 11222 2789987 79999995 455443
Q ss_pred -----HHH--hhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-----C-ceeecCCceEEEe
Q 011570 301 -----ARK--MSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-----G-IGCLKSNAGLFLW 367 (483)
Q Consensus 301 -----~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-----g-i~~~~~~~g~f~~ 367 (483)
... ....+..+++++.++.++++.. .+ +...++++++++++.+.|+++ + +....+.| .|++
T Consensus 317 l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g-~~~~ 390 (449)
T 2cjg_A 317 ADNVFAVPSRLNSTWGGNLTDMVRARRILEVI---EA--EGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRG-LMCA 390 (449)
T ss_dssp TTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHH---HH--HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEET-TEEE
T ss_pred hhhcccCCcccccCCCCCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeecc-EEEE
Confidence 111 1112346788888887777521 11 223445566666666666543 2 44455555 4677
Q ss_pred eecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 368 MDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 368 ~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
++++... ...+++..|++ +||.+.|+. .+++||+++. .+++++++++++|++++++
T Consensus 391 ~~~~~~~------~~~~~~~~l~~-~Gv~v~~~g------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 447 (449)
T 2cjg_A 391 FSLPTTA------DRDELIRQLWQ-RAVIVLPAG------ADTVRFRPPLTVSTAEIDAAIAAVRSALPV 447 (449)
T ss_dssp EECSSHH------HHHHHHHHHHH-TTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEECChH------HHHHHHHHHHH-CCeEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 8887521 13368888885 699999862 4789998765 5999999999999998865
No 203
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.92 E-value=3.3e-23 Score=216.22 Aligned_cols=325 Identities=10% Similarity=0.093 Sum_probs=223.9
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcC--------------CCCeEEEeCCCC
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLAD--------------PGDAFLVPTPYY 153 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~--------------~gd~Vlv~~P~y 153 (483)
..|....+..++++++++|+.+.+| .+.+++.+++|+|+++++..++.++.+ +++.|+++.++|
T Consensus 125 ~~~~~~p~~~~le~~~~~~l~~~~g--~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H 202 (511)
T 3vp6_A 125 FTYEIAPVFVLMEQITLKKMREIVG--WSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSH 202 (511)
T ss_dssp SCTTTCHHHHHHHHHHHHHHHHHHT--CCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSC
T ss_pred CCcccCchHHHHHHHHHHHHHHHhC--CCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCch
Confidence 3566666788999999999999988 333467999999999999988877654 577999999999
Q ss_pred cChHHHHhhhcCc---EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhh
Q 011570 154 PGFDRDLRWRTGV---QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINE 230 (483)
Q Consensus 154 ~~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~ 230 (483)
..+...++.. |. +++.++.++ ++.+|+++|+++|.+...++..+++|++++|+||||.+-+ +++|+++|++
T Consensus 203 ~s~~~~~~~~-g~g~~~~~~v~~d~--~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~---l~~I~~ia~~ 276 (511)
T 3vp6_A 203 YSIKKAGAAL-GFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEK 276 (511)
T ss_dssp THHHHHHHHT-TSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC---HHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCCCcEEEeecCC--CCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc---HHHHHHHHHH
Confidence 9999988876 87 899999874 5789999999999876666666899999999999999966 8899999999
Q ss_pred cCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH-hhhcC-
Q 011570 231 KNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK-MSSFG- 308 (483)
Q Consensus 231 ~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~-~~~~~- 308 (483)
||+++++|++|+...+.. +.+.....-.. ...+++.+++|.++.| ..+|+++..++.+...... ...+.
T Consensus 277 ~~~~lhvD~a~~~~~~~~-~~~~~~~~g~~-------~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~ 347 (511)
T 3vp6_A 277 YNLWLHVDAAWGGGLLMS-RKHRHKLNGIE-------RANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMHASYLF 347 (511)
T ss_dssp HTCEEEEEETTGGGGGGC-TTTGGGGTTGG-------GCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCTTTC
T ss_pred cCCEEEEEccchhhHhhC-hhhhhhccCCc-------cCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHhccCCcccc
Confidence 999999999998765433 22221111011 2235567999998744 6789888866654433211 11110
Q ss_pred ---------------------CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceeec---CCce
Q 011570 309 ---------------------LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLK---SNAG 363 (483)
Q Consensus 309 ---------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~---~~~g 363 (483)
....+...++..++. .+.+++..++..++.+++.+.|++. |+++.. |..+
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g-----~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~ 422 (511)
T 3vp6_A 348 QQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG-----TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHT 422 (511)
T ss_dssp CSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSS
T ss_pred CcccccccccCccCCCCCCCCchHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeE
Confidence 011222333333331 3346777778888889999999887 888865 5666
Q ss_pred EEEeeecCchhhcc--C------h-HHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc--CCHHHHHHHHHHHHH
Q 011570 364 LFLWMDLHHLLKEQ--T------Y-EAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN--MDDRTMEIALSRITS 432 (483)
Q Consensus 364 ~f~~~~l~~~~~~~--~------~-~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~--~~~e~l~~~l~~L~~ 432 (483)
.+.|.-.|...+.. . . ....++.+.|.++ |+.+.. ..+...+.+++|+++++ .++++++.++++|++
T Consensus 423 ~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-G~~~~~-~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~ 500 (511)
T 3vp6_A 423 NVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMES-GTTMVG-YQPQGDKANFFRMVISNPAATQSDIDFLIEEIER 500 (511)
T ss_dssp CEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHH-TSCEEE-EEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhc-CCEEEE-EEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 54443334332110 0 0 0123577777766 654332 11221223579999943 589999999999987
Q ss_pred HHHH
Q 011570 433 FMLK 436 (483)
Q Consensus 433 ~l~~ 436 (483)
+-+.
T Consensus 501 ~~~~ 504 (511)
T 3vp6_A 501 LGQD 504 (511)
T ss_dssp HHC-
T ss_pred HHHh
Confidence 6544
No 204
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.92 E-value=1.4e-23 Score=216.19 Aligned_cols=303 Identities=13% Similarity=0.054 Sum_probs=202.9
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChh-HHHHHHHHHhcC--CCCeEEEeCCCCcChHHHHhhhcCcEEEEee
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGAT-GAHETVAFCLAD--PGDAFLVPTPYYPGFDRDLRWRTGVQLVPVV 172 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~-~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~ 172 (483)
..++.+++.+++.+.+| ++++ +++|+|++ .++..++.++.. +|+.|+++.+.|+.+...++.. |++++.++
T Consensus 131 ~~~~~~~~~~~la~~~g----~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~-G~~~~~v~ 204 (456)
T 2z67_A 131 MYALTNKILESFFKQLG----LNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFV-GMNMRLVE 204 (456)
T ss_dssp HHHHHHHHHHHHHHHTT----CCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHT-TCEEEEEC
T ss_pred HHHHHHHHHHHHHHHcC----CCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHc-CCCceEEE
Confidence 45566666666666655 3445 99999999 455545555433 6788999999999998888875 99999988
Q ss_pred cCC-CCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 173 CDS-SNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 173 ~~~-~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+.. +.++.+|+++|+++|++... ..++.+|++++||||||.+.+ +++|.++|+++|+++++|++|+...++. .
T Consensus 205 ~~~~~~~~~~d~~~l~~~i~~~~~-~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~-~- 278 (456)
T 2z67_A 205 TVLDGDRVYVPVEDIENAIKKEIE-LGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYY-L- 278 (456)
T ss_dssp CEEETTEEECCHHHHHHHHHHHHH-TTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHH-H-
T ss_pred EeccCCCCCcCHHHHHHHHHHHhh-CCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHh-h-
Confidence 632 34678999999999932111 126778889999999999988 7888888999999999999997643211 0
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCC--hHHHHHHHHhcCChhHHH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVS--SQTQHLIATMLSDDQFVE 329 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s--~~~q~~~~~~l~~~~~~~ 329 (483)
........ . ...+++.|++|.++ +++++||+++.++.+.+.+......+... .+++.++...+. .
T Consensus 279 -~~~~~~~~-----~-~~D~~~~s~hK~~~-~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~-----~ 345 (456)
T 2z67_A 279 -EKLKKAFK-----Y-RVDAVVSSSDKNLL-TPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMG-----S 345 (456)
T ss_dssp -HHHHHHHT-----S-CCSEEEEEHHHHHC-CCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH-----H
T ss_pred -HHHHHhhC-----C-CCCEEEEcCCCCcC-CCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH-----H
Confidence 01111111 1 22356789999764 67899999996565555442211111111 223333333332 2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcC----CceeecCCceEEEeeec--CchhhccChHHHHHHHHHHHHhcCe---Eee--
Q 011570 330 KFIAESAKRIAERHKAFTWGLSQV----GIGCLKSNAGLFLWMDL--HHLLKEQTYEAEMALWRVIINEVKL---NVS-- 398 (483)
Q Consensus 330 ~~~~~~~~~l~~~~~~l~~~L~~~----gi~~~~~~~g~f~~~~l--~~~~~~~~~~~~~~~~~~Ll~~~gV---~v~-- 398 (483)
..+++..+++.++++++.+.|.+. |+.+.++. .++++++ +.. ..++...|.++ || .+.
T Consensus 346 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~~--~~v~~~~~~~~~--------~~~l~~~L~~~-gi~~~rv~~~ 414 (456)
T 2z67_A 346 KNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVE--SPIASCISVNSD--------PVEIAAKLYNL-RVTGPRGIKK 414 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCCC--CSSEEEEECSSC--------HHHHHHHHHHT-TEESCEEECT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccCCEecCCC--CeEEEEEecccH--------HHHHHHHHHHc-CCCcceEEee
Confidence 335666778888889999999887 87777776 3566666 321 12566777654 64 443
Q ss_pred ----CCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 399 ----PGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 399 ----pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
+|..|.....+++|++++. .+++++++++++|++++
T Consensus 415 ~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 415 TDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp TCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred cCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 2444433335799999984 69999999999998754
No 205
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.92 E-value=1.1e-22 Score=204.39 Aligned_cols=301 Identities=13% Similarity=0.116 Sum_probs=206.3
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChH--HHHhhhcC--cEEEEee
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFD--RDLRWRTG--VQLVPVV 172 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~--~~~~~~~G--~~~~~v~ 172 (483)
.++.+++++.+.+.+| .+ +.|++|+|+++++..++.. +.+||+|++..++|.++. ..++.. | .+++.++
T Consensus 34 ~~~~~~~~~~l~~~~~----~~-~~v~~~~sgt~a~~~~~~~-~~~gd~vi~~~~~~~~~~~~~~~~~~-g~~~~~~~~~ 106 (379)
T 3ke3_A 34 QEVMNDLLSNLKTVYN----AE-AAVIIPGSGTYGMEAVARQ-LTIDEDCLIIRNGWFSYRWTQILEKG-KFAKSSTVLT 106 (379)
T ss_dssp HHHHHHHHHHHHHHHT----CS-EEEEEESCHHHHHHHHHHH-HCTTCEEEEEECSHHHHHHHHHHHHH-CCSSEEEEEE
T ss_pred HHHHHHHHHHHHHHhC----CC-CEEEEcCChhHHHHHHHHh-CCCCCeEEEEeCCchhHHHHHHHHHh-CCCCceEEEe
Confidence 3555555666555554 23 6899999999999998865 479999999999987643 233333 5 4777777
Q ss_pred cCCCC------Cc-ccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc
Q 011570 173 CDSSN------DF-KVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV 245 (483)
Q Consensus 173 ~~~~~------~~-~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~ 245 (483)
.+..+ .| .+|++++++++++. ++++|++++++||||.+++.+++++|.++|+++|+++|+|+++. .
T Consensus 107 ~~~~g~~~~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g- 179 (379)
T 3ke3_A 107 AERTEDTEAPKPFAPVDIETAVAKIKED-----KSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G- 179 (379)
T ss_dssp CEESSCCSSCCCEECCCHHHHHHHHHHH-----TCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T-
T ss_pred ccccccccccCCCCCCCHHHHHHHHhhc-----CCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C-
Confidence 64311 12 48999999999642 68899999999999999999999999999999999999999985 2
Q ss_pred cCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--h-----------------
Q 011570 246 FTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--S----------------- 306 (483)
Q Consensus 246 ~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--~----------------- 306 (483)
. .+ ..+..+ +..+++.|++|.++ .+..+|+++++ +.+.+.+.... .
T Consensus 180 --~-~~-~~~~~~---------~~d~~~~s~~K~l~-~~~g~g~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 244 (379)
T 3ke3_A 180 --C-VW-LDMKEL---------GIDVLISAPQKGWS-STPCAGLVMLS-AAAIKKVESTESNCFSLDLKQWLTIMRAYEN 244 (379)
T ss_dssp --T-CC-CCHHHH---------TCSEEEECTTTTTC-SCCCEEEEEEC-HHHHHHHHTCCCSCSTTCHHHHHHHHHHHHT
T ss_pred --C-cc-cccccc---------CCCEEEecchhhcC-CCCceEEEEEC-HHHHHhhhcCCCCceeecHHHHHHHHHhhhc
Confidence 2 22 233322 33467889999986 44458999994 55544443210 0
Q ss_pred ----c-CCCChHHHHHHHHhcCChhHHHHH-HHHHHHHHHHHHHHHHHhhhcCCceeecCC---ceEEEeeecCchhhcc
Q 011570 307 ----F-GLVSSQTQHLIATMLSDDQFVEKF-IAESAKRIAERHKAFTWGLSQVGIGCLKSN---AGLFLWMDLHHLLKEQ 377 (483)
Q Consensus 307 ----~-~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~---~g~f~~~~l~~~~~~~ 377 (483)
+ ++.+...+.++.+++.. +.+. +++..++++++++++.+.|.++|+++..+. .+....+..+..
T Consensus 245 g~~~~~~t~~~~~~~a~~aal~~---~~~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~~---- 317 (379)
T 3ke3_A 245 GGHAYHATMPTDSLRQFRDAILE---AKEIGFDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTERD---- 317 (379)
T ss_dssp TSCCCSSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECSCH----
T ss_pred cCCCCCCCCCHHHHHHHHHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEccCCc----
Confidence 1 13455555555555432 2222 466677788888999999999898876543 222233333321
Q ss_pred ChHHHHHHHHHHHHhcCeEeeCCCCCCC---CCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 378 TYEAEMALWRVIINEVKLNVSPGSSFHC---PNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 378 ~~~~~~~~~~~Ll~~~gV~v~pg~~f~~---~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+..+... +.++||.+.+|..+.. ...+.+||++.. .+++++++++++|++++++..
T Consensus 318 ----~~~~~~~-L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 318 ----DMHKGSA-FAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp ----HHHSSHH-HHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred ----chHHHHH-HHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 1122333 4567999999986543 225789999965 588999999999999987764
No 206
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.92 E-value=1.1e-23 Score=219.37 Aligned_cols=315 Identities=10% Similarity=0.123 Sum_probs=214.3
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhCCCCCcCC-CcEEEeCChhHHHHHHHHHh----c---------CC------CC-eEEE
Q 011570 90 FQDYHGLPEFRNAVAKFMGKVRGNRITFDP-DRIVMSGGATGAHETVAFCL----A---------DP------GD-AFLV 148 (483)
Q Consensus 90 Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~-~~i~it~G~~~al~~~~~~l----~---------~~------gd-~Vlv 148 (483)
|....+..++++++.+++.+.+| +++ +++++|+|+++++..++.++ + .+ |+ .|++
T Consensus 132 ~~~~~~~~~le~~~~~~la~~~g----~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~ 207 (497)
T 2qma_A 132 WDQASSATYVEQKVVNWLCDKYD----LSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVC 207 (497)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHTT----CCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEE
T ss_pred hhhChHHHHHHHHHHHHHHHHhC----CCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEE
Confidence 44444567888888888888776 334 78999999999999988773 3 12 46 7999
Q ss_pred eCCCCcChHHHHhhhcCc---EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHH
Q 011570 149 PTPYYPGFDRDLRWRTGV---QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIV 225 (483)
Q Consensus 149 ~~P~y~~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~ 225 (483)
+.++|..+...+... |. +++.+|+++ ++.+|+++|+++|++...++.++.+|++++|+||||.+.+ +++|+
T Consensus 208 s~~~h~s~~~~~~~~-g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~---l~~I~ 281 (497)
T 2qma_A 208 SKKSHFTVQKSASWM-GLGEKAVMTVDANA--DGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDD---LDFIA 281 (497)
T ss_dssp ETTSCTHHHHHHHHT-TSCGGGEEEECBCT--TSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHH
T ss_pred CCCchHHHHHHHHHc-CCCcccEEEEecCC--CCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCC---HHHHH
Confidence 999999888888765 65 789999864 5789999999999864443333558899999999999887 88889
Q ss_pred HHHhhcCcEEEEccccccCccCCCCCcch-HHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh
Q 011570 226 SFINEKNIHLVCDEIYAATVFTKESSFVS-IAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM 304 (483)
Q Consensus 226 ~~a~~~~~~iI~Deay~~~~~~~~~~~~s-~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~ 304 (483)
++|+++|+++++|++|+...+.. . +.. +..+ . ...+++.|++|.++.| .++|++++.++...+.+...
T Consensus 282 ~l~~~~~~~l~vD~a~~~~~~~~-~-~~~~~~gi-~-------~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~~~~~~~~ 350 (497)
T 2qma_A 282 DMAVKHDMWMHVDGAYGGALILS-S-HKSRLKGV-E-------RAHSISVDFHKLFYQT-ISCGALLVNDKSNFKFLLHH 350 (497)
T ss_dssp HHHHHHTCEEEEEETTGGGGGGS-T-TGGGGTTG-G-------GCSEEEEETTTTTCCC-SSCEEEEESCGGGGGGGCC-
T ss_pred HHHHHcCCEEEEehhhhHHHHhC-c-chHhhcCc-c-------cCCEEEEcchhccCCC-cceEEEEEeCHHHHHHhcCC
Confidence 99999999999999998765433 2 211 1111 1 2235677999998755 79999998665432221100
Q ss_pred hhcC-C-----C-------------ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceee-cCCce
Q 011570 305 SSFG-L-----V-------------SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCL-KSNAG 363 (483)
Q Consensus 305 ~~~~-~-----~-------------s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~-~~~~g 363 (483)
..+. . . ..+.+.++...+.. +.+++..+++.++++++.+.|++. ++++. ++.++
T Consensus 351 ~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~-----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 425 (497)
T 2qma_A 351 ADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGP-----KALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLS 425 (497)
T ss_dssp -------------------CCSCCCTHHHHHHHHHHTCH-----HHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSS
T ss_pred chhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCH-----HHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCce
Confidence 0110 0 0 12223333344432 224556667778889999999887 88875 45555
Q ss_pred EEEeeecCchhhccChH-HHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEec-c-CCHHHHHHHHHHHHHHHHH
Q 011570 364 LFLWMDLHHLLKEQTYE-AEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFA-N-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 364 ~f~~~~l~~~~~~~~~~-~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~-~-~~~e~l~~~l~~L~~~l~~ 436 (483)
++++++..... ... ...++.+.+.+ .|+.+.++..+. +.+++|++++ . .+++++++++++|++++++
T Consensus 426 -~v~f~~~~~~~--~~~~l~~~l~~~l~~-~G~~~~~~~~~~--g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 426 -TVLFRATHETA--DLDELNKALRLEALT-RGIAVLGETIVD--GKTALKFTILNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp -EEEEEECCSSS--CHHHHHHHHHHHHHH-HTSCBCEEEEET--TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -EEEEEEcCCcc--CHHHHHHHHHHHHHh-CCCEEEEeeEEC--CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 66677753210 111 12245566665 498877654442 3468999984 3 5999999999999988765
No 207
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.91 E-value=6.1e-23 Score=210.33 Aligned_cols=294 Identities=14% Similarity=0.142 Sum_probs=198.7
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh---------cCCCCeEEEeCCCCcChHHHH
Q 011570 90 FQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL---------ADPGDAFLVPTPYYPGFDRDL 160 (483)
Q Consensus 90 Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l---------~~~gd~Vlv~~P~y~~~~~~~ 160 (483)
|.+..+..++|+++|++++ . +++++++++++++..++.++ +++||+|+++.|+|+.+...+
T Consensus 58 ~~~~~~~~~l~~~la~~~g--------~--~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~ 127 (437)
T 3bb8_A 58 LTTGRFNDAFEKKLGEYLG--------V--PYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPT 127 (437)
T ss_dssp CBSCHHHHHHHHHHHHHHT--------C--SEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHH
T ss_pred cCCChHHHHHHHHHHHHHC--------C--CcEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHH
Confidence 4344568999999999986 1 26778888889999999998 889999999999999999988
Q ss_pred hhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeC-CCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcc
Q 011570 161 RWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITN-PSNPLGTFLDRETLKDIVSFINEKNIHLVCDE 239 (483)
Q Consensus 161 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~-P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~De 239 (483)
... |++++.++++++ +|.+|++.+++++.+ ++++|++++ |+|| .+ +++|.++|+++|+++|+||
T Consensus 128 ~~~-g~~~~~v~~~~~-~~~~d~~~l~~~i~~------~~~~v~~~~~~g~~----~~---~~~i~~l~~~~~~~li~D~ 192 (437)
T 3bb8_A 128 IQN-GLIPVFVDVDIP-TYNVNASLIEAAVSD------KTKAIMIAHTLGNL----FD---LAEVRRVADKYNLWLIEDC 192 (437)
T ss_dssp HHT-TCEEEECCEETT-TTEECGGGHHHHCCT------TEEEEEEECGGGCC----CC---HHHHHHHHHHHTCEEEEEC
T ss_pred HHc-CCEEEEEeccCc-cCCcCHHHHHHhcCC------CCeEEEEeCCCCCh----hc---HHHHHHHHHHcCCEEEEEC
Confidence 875 999999998742 578999999998853 789999984 5555 45 8888999999999999999
Q ss_pred ccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcC-----------
Q 011570 240 IYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFG----------- 308 (483)
Q Consensus 240 ay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~----------- 308 (483)
+|....... .. . +. ... .+++.||||.++++|.|.|+++++++.+...+.....++
T Consensus 193 a~~~g~~~~-~~--~---~~------~~~-d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (437)
T 3bb8_A 193 CDALGSTYD-GK--M---AG------TFG-DIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDN 259 (437)
T ss_dssp TTCTTCEET-TE--E---TT------SSS-SEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC--------
T ss_pred ccccCceEC-Ce--e---cc------ccc-CEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCccccccccccc
Confidence 997421111 11 1 11 111 256789999988999999999997666665543322111
Q ss_pred ------------------------------CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Ccee
Q 011570 309 ------------------------------LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGC 357 (483)
Q Consensus 309 ------------------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~ 357 (483)
.++.+...++...+.. +.+..++.++.++++.+.|.++ |+.+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~-------~~~~~~~~~~~~~~l~~~L~~~~g~~~ 332 (437)
T 3bb8_A 260 TCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLER-------IEEFVEKRKANFKYLKDALQSCADFIE 332 (437)
T ss_dssp --------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHGGGGTTTEE
T ss_pred ccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhhccCCccc
Confidence 0123333333233321 1222333356667888888877 6655
Q ss_pred ecCC--------ceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCC---C----------C---------
Q 011570 358 LKSN--------AGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHC---P----------N--------- 407 (483)
Q Consensus 358 ~~~~--------~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~---~----------~--------- 407 (483)
.+.. ..+.+.++.+...+ ..++...|.+ +||.++++..... + .
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~L~~-~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 405 (437)
T 3bb8_A 333 LPEATENSDPSWFGFPITLKEDSGVS------RIDLVKFLDE-AKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIM 405 (437)
T ss_dssp CCCCCTTEECCCSSEEEEECGGGSSC------HHHHHHHHHH-TTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHH
T ss_pred cCCCCCCCceeeEEEEEEECCcCcCc------HHHHHHHHHH-CCCceeccCCcccccCchhhccCccccCCCcHHHHHh
Confidence 4311 12223344431111 2256666664 5999998754110 0 0
Q ss_pred CCEEEEEecc-CCHHHHHHHHHHHHHHHH
Q 011570 408 PGWFRVCFAN-MDDRTMEIALSRITSFML 435 (483)
Q Consensus 408 ~~~iRis~~~-~~~e~l~~~l~~L~~~l~ 435 (483)
.+.+||++.. .++++++.+++.|+++++
T Consensus 406 ~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 406 NQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp HHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred cCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 1249999976 599999999999988765
No 208
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.91 E-value=6.3e-23 Score=207.44 Aligned_cols=282 Identities=17% Similarity=0.153 Sum_probs=187.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh----cCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR----TGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~----~G~~~~~v 171 (483)
..+|++.+|++.+ .+++++++++++++.. +..++++||+|+++.|+|+.....+... .|.+++.+
T Consensus 69 ~~~l~~~la~l~g----------~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v 137 (400)
T 3nmy_A 69 RFAYERCVAALEG----------GTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFV 137 (400)
T ss_dssp HHHHHHHHHHHHT----------CSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEE
T ss_pred HHHHHHHHHHHhC----------CCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEE
Confidence 3566777776654 2367777777999998 5678899999999999998655543321 39999988
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+.+ |++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|....+.. +
T Consensus 138 ~~~-------d~~~l~~~i~~------~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~--~ 199 (400)
T 3nmy_A 138 DLT-------DPAAFKAAIRA------DTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQR--P 199 (400)
T ss_dssp CTT-------SHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC--G
T ss_pred CCC-------CHHHHHHHhcc------CCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCC--h
Confidence 854 78999988853 7899999999999999998 8889999999999999999997532221 1
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEE--EEecChHHHHHHHHhhhc--CCCChHHHHHHHHhcCChhH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGI--IYSYNDQVVSCARKMSSF--GLVSSQTQHLIATMLSDDQF 327 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~--li~~~~~l~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~ 327 (483)
+ ..+.++++.|+||.+|.+|.++|. +++.++.+.+.+...... ...++....++...++.
T Consensus 200 ------~-------~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~--- 263 (400)
T 3nmy_A 200 ------L-------SLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKT--- 263 (400)
T ss_dssp ------G-------GGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT---
T ss_pred ------h-------hcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH---
Confidence 1 114457899999999878877755 555566666665544332 23455555555554443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcC-Cce-eecC----------------CceEEEeeecCchhhccChHHHHHHHHHH
Q 011570 328 VEKFIAESAKRIAERHKAFTWGLSQV-GIG-CLKS----------------NAGLFLWMDLHHLLKEQTYEAEMALWRVI 389 (483)
Q Consensus 328 ~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~-~~~~----------------~~g~f~~~~l~~~~~~~~~~~~~~~~~~L 389 (483)
+..+.++..++...+.+.|++. .+. +..| ..|.+++++++... .....|...+
T Consensus 264 ----l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~-----~~~~~~~~~l 334 (400)
T 3nmy_A 264 ----LPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF-----DAAKRFCEKT 334 (400)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH-----HHHHHHHHHC
T ss_pred ----HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH-----HHHHHHHHcC
Confidence 2334455567777888888876 343 2222 23568889987421 1112333332
Q ss_pred HHhcCeEeeCCCCCCC---------------------CCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Q 011570 390 INEVKLNVSPGSSFHC---------------------PNPGWFRVCFANMDDRTMEIALSRITSFML 435 (483)
Q Consensus 390 l~~~gV~v~pg~~f~~---------------------~~~~~iRis~~~~~~e~l~~~l~~L~~~l~ 435 (483)
. -.++.+..|..+.. -.++.+|||++. |+.+.+++.|+++++
T Consensus 335 ~-~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl---e~~~dli~dl~~al~ 397 (400)
T 3nmy_A 335 E-LFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGI---EDLGDLRGDLERALV 397 (400)
T ss_dssp S-SSEECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHC
T ss_pred C-cceEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHHh
Confidence 1 23444444443210 135689999984 345556667777665
No 209
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.91 E-value=1e-22 Score=213.06 Aligned_cols=320 Identities=13% Similarity=0.128 Sum_probs=214.5
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-------C-CCC------eEEEeCCCCc
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-------D-PGD------AFLVPTPYYP 154 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-------~-~gd------~Vlv~~P~y~ 154 (483)
.|....+..++.+.+.+++.+.+| .+++++++|+|+++++..++.++. + +|| .|+++.++|+
T Consensus 139 ~~~~s~~~~~le~~~~~~la~l~g----~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~ 214 (515)
T 2jis_A 139 TYEIAPVFVLMEEEVLRKLRALVG----WSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHY 214 (515)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHHT----CSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCT
T ss_pred chhhchHHHHHHHHHHHHHHHHhC----CCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccH
Confidence 344444556778887888877776 457899999999999988887763 2 576 8999999999
Q ss_pred ChHHHHhhhcCc---EEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc
Q 011570 155 GFDRDLRWRTGV---QLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK 231 (483)
Q Consensus 155 ~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~ 231 (483)
.+...++.. |. +++.+|.++ ++.+|+++|+++|.+...++.++++|++++|+||||.+.+ +++|.++|+++
T Consensus 215 s~~~~~~~~-g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~ 288 (515)
T 2jis_A 215 SIQKGAAFL-GLGTDSVRVVKADE--RGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRH 288 (515)
T ss_dssp HHHHHHHHT-TSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHH
T ss_pred HHHHHHHHc-CCCCCcEEEEecCC--CCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHHc
Confidence 998888875 77 899999864 5789999999999876555557899999999999999988 88889999999
Q ss_pred CcEEEEccccccCccCCCCCcch-HHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecCh-HHHHH-HHHhhhcC
Q 011570 232 NIHLVCDEIYAATVFTKESSFVS-IAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYND-QVVSC-ARKMSSFG 308 (483)
Q Consensus 232 ~~~iI~Deay~~~~~~~~~~~~s-~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~-~l~~~-~~~~~~~~ 308 (483)
|+++++|++|+...+.. +.+.. +..+ ....+++.|++|.++ .+.++|++++.++ .+.+. ......+.
T Consensus 289 g~~l~vD~a~~~~~~~~-~~~~~~~~g~--------~~aD~v~~s~hK~l~-~p~g~G~l~~~~~~~~~~~~~~~~~~yl 358 (515)
T 2jis_A 289 GLWLHVDAAWGGSVLLS-QTHRHLLDGI--------QRADSVAWNPHKLLA-AGLQCSALLLQDTSNLLKRCHGSQASYL 358 (515)
T ss_dssp TCEEEEEETTGGGGGGC-TTTGGGGTTG--------GGCSEEEECTTSTTC-CCSCCEEEEESCCSCHHHHHHCC-----
T ss_pred CCeEEEehhhhhHHHhC-hhhHhhcCCC--------ccCCEEEECcccccC-CCCCeeEEEEeChHHHHHHHhcCCchhc
Confidence 99999999998765543 32221 1111 123467789999987 4467999999765 34332 11000000
Q ss_pred ------------------C----CChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cceeec-CCceE
Q 011570 309 ------------------L----VSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLK-SNAGL 364 (483)
Q Consensus 309 ------------------~----~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~-~~~g~ 364 (483)
. ...+.+.++...+.. ..+++..++..++++++.+.|++. |+++.. +..+.
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~-----~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~ 433 (515)
T 2jis_A 359 FQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGD-----QGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVN 433 (515)
T ss_dssp ----CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSE
T ss_pred cCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeE
Confidence 0 012333334334322 224566677788889999999887 888764 44455
Q ss_pred EEeeecCchhhc----cChHHH-----HHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEec-c-CCHHHHHHHHHHHHHH
Q 011570 365 FLWMDLHHLLKE----QTYEAE-----MALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFA-N-MDDRTMEIALSRITSF 433 (483)
Q Consensus 365 f~~~~l~~~~~~----~~~~~~-----~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~-~-~~~e~l~~~l~~L~~~ 433 (483)
+.+...|..... ..+... ..+.+.+.++ |+........ ....+++|++++ . .++++++.++++|+++
T Consensus 434 v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~-G~~~~~~~~~-~~~~~~lRis~~~~~~t~edid~~~~~l~~~ 511 (515)
T 2jis_A 434 VCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKE-GSMMIGYQPH-GTRGNFFRVVVANSALTCADMDFLLNELERL 511 (515)
T ss_dssp EEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHH-TSCEEEEEEE-TTEEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhc-CCEEEEEEEE-CCceEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 554334432111 111111 1245556654 7543211100 112458999994 4 5999999999999887
Q ss_pred HH
Q 011570 434 ML 435 (483)
Q Consensus 434 l~ 435 (483)
++
T Consensus 512 ~~ 513 (515)
T 2jis_A 512 GQ 513 (515)
T ss_dssp HT
T ss_pred Hh
Confidence 64
No 210
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.91 E-value=5.6e-23 Score=208.62 Aligned_cols=282 Identities=13% Similarity=0.062 Sum_probs=183.9
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH----hhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----RWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----~~~~G~~~~~v 171 (483)
..++++.+|++++ .+++++++|+++++..++.+++++||+|+++.|.|.+....+ +. .|++++.+
T Consensus 84 ~~~le~~lA~l~g----------~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~-~G~~v~~v 152 (415)
T 2fq6_A 84 HFSLQQAMCELEG----------GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSK-LGVTTSWF 152 (415)
T ss_dssp HHHHHHHHHHHHT----------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGG-GTCEEEEE
T ss_pred HHHHHHHHHHHhC----------CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHH-cCcEEEEE
Confidence 4678888888875 246777889999999999999999999999999998877654 33 39999888
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhh--cCcEEEEccccccCccCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINE--KNIHLVCDEIYAATVFTKE 249 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~--~~~~iI~Deay~~~~~~~~ 249 (483)
+.+ |++++++++++ ++++|++++|+||||.+++ +++|+++|++ +|+++|+|++|+...+ .
T Consensus 153 ~~~-------d~~~le~ai~~------~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~-~- 214 (415)
T 2fq6_A 153 DPL-------IGADIVKHLQP------NTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVL-F- 214 (415)
T ss_dssp CTT-------CGGGGGGGCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTS-S-
T ss_pred CCC-------CHHHHHHhhcc------CCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCccccc-C-
Confidence 753 67888888753 7899999999999999998 7888999999 9999999999975422 2
Q ss_pred CCcchHHHhhhhccccCCCeEEEEecCccccCCCCce-EEEEEecChHHHHHHHHhhh-cCC-CChHHHHHHHHhcCChh
Q 011570 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFR-VGIIYSYNDQVVSCARKMSS-FGL-VSSQTQHLIATMLSDDQ 326 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlR-iG~li~~~~~l~~~~~~~~~-~~~-~s~~~q~~~~~~l~~~~ 326 (483)
. ++ .+ +.++++.|+||.+|.+|.+ +||++++++ +.+.+..... ++. .++....++...+
T Consensus 215 ~---p~-~~---------g~Div~~S~sK~lg~~g~~~~G~l~~~~~-~~~~l~~~~~~~G~~~~~~~a~~~~~~l---- 276 (415)
T 2fq6_A 215 K---AL-DF---------GIDVSIQAATKYLVGHSDAMIGTAVCNAR-CWEQLRENAYLMGQMVDADTAYITSRGL---- 276 (415)
T ss_dssp C---GG-GG---------TCSEEEEETTTTTTCSSSCCCEEEEECTT-THHHHHHHHHHTTCCCCHHHHHHHHHHH----
T ss_pred C---cc-cc---------CCeEEEEeCccccCCCCCceEEEEEeCHH-HHHHHHHHHHhcCCCCCHHHHHHHHhhh----
Confidence 1 11 11 3458899999999988765 689998654 4444433322 332 3333232222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcC-Cce-eecC----------------CceEEEeeecCchhhccChHHHHHHHHH
Q 011570 327 FVEKFIAESAKRIAERHKAFTWGLSQV-GIG-CLKS----------------NAGLFLWMDLHHLLKEQTYEAEMALWRV 388 (483)
Q Consensus 327 ~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~-~~~~----------------~~g~f~~~~l~~~~~~~~~~~~~~~~~~ 388 (483)
+.+..+.++..++...+.+.|.+. ++. +..| ..+..+++.++.... ..+...+...
T Consensus 277 ---~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~---~~~~~~~l~~ 350 (415)
T 2fq6_A 277 ---RTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLN---NEELANYLDN 350 (415)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCC---HHHHHHHHTT
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCC---HHHHHHHHHh
Confidence 123444455566677777777765 332 2111 134577888874200 0111233332
Q ss_pred HHHhcCeEeeCCCCCC-------------------CCCCCEEEEEeccC-CHHHHHHHHHHHH
Q 011570 389 IINEVKLNVSPGSSFH-------------------CPNPGWFRVCFANM-DDRTMEIALSRIT 431 (483)
Q Consensus 389 Ll~~~gV~v~pg~~f~-------------------~~~~~~iRis~~~~-~~e~l~~~l~~L~ 431 (483)
+ +..++.++.|+.+. ...++.||||++.. ++++++.+.++|+
T Consensus 351 l-~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~ 412 (415)
T 2fq6_A 351 F-SLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFA 412 (415)
T ss_dssp C-SSCEECSCCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHH
T ss_pred C-CcCeEeccCCCCceeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHH
Confidence 2 22345555552211 01246899999863 4555666555554
No 211
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.91 E-value=1.3e-22 Score=209.17 Aligned_cols=302 Identities=14% Similarity=0.103 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCc---EEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH--------HHhhhcC
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDR---IVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR--------DLRWRTG 165 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~---i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~~G 165 (483)
.+|++...+++.+.+| .+++. .++++++++++..++.++++|||+|+++.+.|.++.. .+... |
T Consensus 99 ~~lE~~a~~~~a~l~g----~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~-g 173 (490)
T 2a7v_A 99 DEIELLCQRRALEAFD----LDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISAT-S 173 (490)
T ss_dssp THHHHHHHHHHHHHTT----CCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------
T ss_pred HHHHHHHHHHHHHHcC----CCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHc-C
Confidence 4677555555555555 34442 3455678999999999999999999999999865431 12222 5
Q ss_pred cE--EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccc-
Q 011570 166 VQ--LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYA- 242 (483)
Q Consensus 166 ~~--~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~- 242 (483)
.. ++++++++ .++.+|++++++++... ++|+|++++|+||+ ..+ +++|.++|+++|+++++|+++.
T Consensus 174 ~~~~~~~~~vd~-~~~~iD~d~le~~l~~~-----~~klIi~~~s~~~~--~~d---l~~i~~ia~~~g~~livD~Ah~~ 242 (490)
T 2a7v_A 174 IFFESMPYKLNP-KTGLIDYNQLALTARLF-----RPRLIIAGTSAYAR--LID---YARMREVCDEVKAHLLADMAHIS 242 (490)
T ss_dssp -------CCBCT-TTCSBCHHHHHHHHHHH-----CCSEEEECCSSCCS--CCC---HHHHHHHHHHTTCEEEEECGGGH
T ss_pred CeEEEEeccccc-ccCCcCHHHHHHHHhhc-----CCcEEEEcCCCCCC--ccc---HHHHHHHHHHcCCEEEEcccccc
Confidence 44 44444443 35789999999998753 67889888999985 445 8889999999999999999974
Q ss_pred cCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecCh--------------HHHHHHHHhhhc-
Q 011570 243 ATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYND--------------QVVSCARKMSSF- 307 (483)
Q Consensus 243 ~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~--------------~l~~~~~~~~~~- 307 (483)
++++.+ ....++ . ...+++.|+||++ .|.|.|+++++++ .+.+.++.....
T Consensus 243 glv~~g-~~~~~~-~----------~aDiv~~S~hK~l--~Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g 308 (490)
T 2a7v_A 243 GLVAAK-VIPSPF-K----------HADIVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPS 308 (490)
T ss_dssp HHHHTT-SSCCGG-G----------TCSEEEEESSGGG--CSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTT
T ss_pred ccccCC-cCCCCC-C----------CCCEEEECCcccC--ccccchheeeccchhcccccccchhhHHHHHHHHHHhccc
Confidence 222332 211121 1 1236788999987 4677899999654 244555443222
Q ss_pred --CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecC-CceEEEeeecCch-hhccChHHHH
Q 011570 308 --GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKS-NAGLFLWMDLHHL-LKEQTYEAEM 383 (483)
Q Consensus 308 --~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~-~~g~f~~~~l~~~-~~~~~~~~~~ 383 (483)
+..+.....+++.++.. ......++..+++.++++++.+.|.+.|+++..+ ..+.++|++++.. .. .
T Consensus 309 ~qggp~~~~iaAla~Al~~--~~~~~~~~~~~~~~~na~~L~~~L~~~G~~v~~~~t~t~lv~vdl~~~g~~------~- 379 (490)
T 2a7v_A 309 LQGGPHNHAIAAVAVALKQ--ACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLD------G- 379 (490)
T ss_dssp TCCSCCHHHHHHHHHHHHH--HHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTTTCC------H-
T ss_pred CCCCchHHHHHHHHHHHHH--HhhhhHHHHHHHHHHHHHHHHHHHHHcCcEEecCCCCCeEEEEEeCCCCCC------H-
Confidence 22233333333333321 1112235667778889999999999999988653 3457899998642 11 1
Q ss_pred HHHHHHHHhcCeEeeCCCCCCC---CCCCEEEEEecc-----CCHHHHHHHHHHHHHHHHHh
Q 011570 384 ALWRVIINEVKLNVSPGSSFHC---PNPGWFRVCFAN-----MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 384 ~~~~~Ll~~~gV~v~pg~~f~~---~~~~~iRis~~~-----~~~e~l~~~l~~L~~~l~~~ 437 (483)
..+..+|++.||.+..+..++. ..++.+||+... .++++++++++.|.+++...
T Consensus 380 ~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~~ 441 (490)
T 2a7v_A 380 ARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIG 441 (490)
T ss_dssp HHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHhh
Confidence 2244556678999986654442 234679997732 47899999999999988754
No 212
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.90 E-value=1.7e-22 Score=209.07 Aligned_cols=322 Identities=13% Similarity=0.091 Sum_probs=221.5
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhCCCCCc-----CCCcEEEeCChhHHHHHHHHHhcC-------------------CCC
Q 011570 89 IFQDYHGLPEFRNAVAKFMGKVRGNRITF-----DPDRIVMSGGATGAHETVAFCLAD-------------------PGD 144 (483)
Q Consensus 89 ~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~-----~~~~i~it~G~~~al~~~~~~l~~-------------------~gd 144 (483)
.|...++..++++++++|+.+.+|.+... .....++|+|+++++..++.+..+ +++
T Consensus 104 ~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 183 (475)
T 3k40_A 104 TWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKL 183 (475)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHE
T ss_pred CccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCe
Confidence 46666678899999999999988721100 013689999999998888766521 346
Q ss_pred eEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHH
Q 011570 145 AFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDI 224 (483)
Q Consensus 145 ~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i 224 (483)
.|+++.++|..+...+... |++++.+|+++ ++ +|+++|+++|++...++..+.+|+++.++|+||.+-+ +++|
T Consensus 184 ~vi~s~~~H~s~~~~~~~~-g~~~~~v~~d~--~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~---l~~I 256 (475)
T 3k40_A 184 VGYCSDQAHSSVERAGLLG-GVKLRSVQSEN--HR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDY---LDEC 256 (475)
T ss_dssp EEEEETTSCHHHHHHHHHH-TCEEEEECCBT--TB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHH
T ss_pred EEEECCCchHHHHHHHHHc-CCceEEEECCC--CC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCC---HHHH
Confidence 8999999999999988876 99999999864 46 9999999999876555555788999999999999977 8889
Q ss_pred HHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHH-HHHHHH
Q 011570 225 VSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQV-VSCARK 303 (483)
Q Consensus 225 ~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l-~~~~~~ 303 (483)
+++|++||+++++|++|+...+.. +.+.....-.. ....+..+++|.++ ....+|+++..++.. .+.+..
T Consensus 257 ~~la~~~~~~lhvD~A~~~~~~~~-~~~~~~~~gi~-------~~Ds~~~~~hK~l~-~p~g~g~l~~~~~~~l~~~~~~ 327 (475)
T 3k40_A 257 GPVGNKHNLWIHVDAAYAGSAFIC-PEYRHLMKGIE-------SADSFNFNPHKWML-VNFDCSAMWLKDPSWVVNAFNV 327 (475)
T ss_dssp HHHHHHTTCEEEEECTTGGGGGGS-GGGGGGGTTGG-------GCSEEEECHHHHSS-CCSSCEEEEESSGGGC------
T ss_pred HHHHHHhCCeEEEeHHhHHHHHhC-HhhHHHhcCcc-------cCCEEEECchhccC-CCCceEEEEEeCHHHHHHHhcC
Confidence 999999999999999998653322 22111111111 12345679999886 445678888865533 222211
Q ss_pred hhhcC----------------CC----ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCc
Q 011570 304 MSSFG----------------LV----SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNA 362 (483)
Q Consensus 304 ~~~~~----------------~~----s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~ 362 (483)
...+. .. ..+.+.++...+. .+.+++..++..++++++.+.|++. |+++..+..
T Consensus 328 ~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~ 402 (475)
T 3k40_A 328 DPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYG-----VENLQAHIRRHCNFAKQFGDLCVADSRFELAAEIN 402 (475)
T ss_dssp ---------------------CCCGGGTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCB
T ss_pred CccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 11110 00 1222333333332 2235666777888889999999987 898876555
Q ss_pred eEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc--CCHHHHHHHHHHHHHHHHHhhh
Q 011570 363 GLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN--MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 363 g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~--~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
...++++++... ....++.++|.++.++.+.|+..+ +..++|+++++ +++++++.++++|+++.++...
T Consensus 403 ~~iv~f~~~~~~-----~~~~~l~~~L~~~g~~~~~~~~~~---g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~~ 473 (475)
T 3k40_A 403 MGLVCFRLKGSN-----ERNEALLKRINGRGHIHLVPAKIK---DVYFLRMAICSRFTQSEDMEYSWKEVSAAADEMEQ 473 (475)
T ss_dssp TTEEEEEESSCH-----HHHHHHHHHHHHHTSCBCEEEEET---TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEeCCch-----HHHHHHHHHHHhCCcEEEEeeEEC---CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 557777775311 123477888887755566655433 35689999875 4889999999999999877643
No 213
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.90 E-value=3.4e-22 Score=207.17 Aligned_cols=322 Identities=13% Similarity=0.059 Sum_probs=225.0
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCc------CCCcEEEeCChhHHHHHHHHHhcC-------------------C
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITF------DPDRIVMSGGATGAHETVAFCLAD-------------------P 142 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~------~~~~i~it~G~~~al~~~~~~l~~-------------------~ 142 (483)
..|...++..++++.+++|+.+.+|.+... .....++|+|+++++..++.+..+ +
T Consensus 108 ~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~ 187 (481)
T 4e1o_A 108 FTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNA 187 (481)
T ss_dssp SSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHT
T ss_pred CCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccC
Confidence 356666778999999999999998832110 013679999999999888876532 5
Q ss_pred CCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHH
Q 011570 143 GDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLK 222 (483)
Q Consensus 143 gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~ 222 (483)
++.|+++.++|..+...+... |.+++.+|.++ ++.+|+++|+++|++....+..+.+|+++.++|+||.+-+ ++
T Consensus 188 ~~~v~~s~~~H~s~~~~~~~~-g~~~~~v~~~~--~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~---l~ 261 (481)
T 4e1o_A 188 RLVAYASDQAHSSVEKAGLIS-LVKMKFLPVDD--NFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDC---LS 261 (481)
T ss_dssp TEEEEEETTSCHHHHHHHHHH-TCEEEEECCCT--TSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HH
T ss_pred CeEEEEcCcchHHHHHHHHhC-CCceEEEEcCC--CCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCC---HH
Confidence 679999999999999988875 99999999863 6789999999999876555555788899999999999877 88
Q ss_pred HHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHH-HH
Q 011570 223 DIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVS-CA 301 (483)
Q Consensus 223 ~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~-~~ 301 (483)
+|+++|++||+++++|++|+...+.. +.+.....-.+ ....+..+++|.++.| .-+|+++..++.... .+
T Consensus 262 ~I~~la~~~~~~lhvDaA~g~~~~~~-~~~~~~~~gi~-------~aDsi~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~ 332 (481)
T 4e1o_A 262 ELGPICAREGLWLHIDAAYAGTAFLC-PEFRGFLKGIE-------YADSFTFNPSKWMMVH-FDCTGFWVKDKYKLQQTF 332 (481)
T ss_dssp HHHHHHHHHTCEEEEECTTGGGGGGS-GGGGGGGTTGG-------GCSEEEECHHHHSSCC-SSCEEEEESBHHHHHTTT
T ss_pred HHHHHHHHcCCeEEeehhhHHHHHhC-hhhHHHhcCcc-------cCCEEEEChHHhcCCC-CceEEEEEeCHHHHHHHh
Confidence 89999999999999999998754333 22222111111 1134556999998754 457777775554322 11
Q ss_pred HHhhhcC--------------------CCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecC
Q 011570 302 RKMSSFG--------------------LVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKS 360 (483)
Q Consensus 302 ~~~~~~~--------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~ 360 (483)
.....+. ....+.+.++...+. .+.+++..++..++++++.+.|++. |+++..+
T Consensus 333 ~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~ 407 (481)
T 4e1o_A 333 SVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFG-----VKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAK 407 (481)
T ss_dssp CCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSC
T ss_pred cCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Confidence 1001110 002333444444432 2235666777888889999999987 8988765
Q ss_pred CceEEEeeecCchhhccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc--CCHHHHHHHHHHHHHHHHHh
Q 011570 361 NAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN--MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 361 ~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~--~~~e~l~~~l~~L~~~l~~~ 437 (483)
....+++++++... ....++.++|.++..+.+.|+.. .+..++|+++++ +++++++.++++|+++.++.
T Consensus 408 ~~~~~v~f~~~~~~-----~~~~~l~~~L~~~g~~~~~~~~~---~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~l 478 (481)
T 4e1o_A 408 RHLGLVVFRLKGPN-----SLTENVLKEIAKAGRLFLIPATI---QDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLI 478 (481)
T ss_dssp CCSSEEEEEESSCH-----HHHHHHHHHHHHHCSSBCEEEEE---TTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CceeEEEEEeCCch-----HHHHHHHHHHHhCCeEEEEeeEE---CCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 55567888875421 12347788888764455555432 234689999865 37899999999999988764
No 214
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.90 E-value=4.2e-22 Score=200.04 Aligned_cols=294 Identities=15% Similarity=0.193 Sum_probs=192.5
Q ss_pred CcHHHHHHH-HHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh-cCCCCeEEEeCCCCcChHHHHhhhcCcEEEEee
Q 011570 95 GLPEFRNAV-AKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL-ADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVV 172 (483)
Q Consensus 95 g~~~Lr~~i-a~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~ 172 (483)
...+|++++ |++++ ..+++++++|+++++..++.++ ++|||+|+++.|+|..+...+... |++++.++
T Consensus 37 ~~~~l~~~~~a~~~g---------~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~~~~~~~-G~~~~~v~ 106 (377)
T 3ju7_A 37 INQRFEQTIMSGFFQ---------NRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATPLAAIWC-GLEPYFID 106 (377)
T ss_dssp HHHHHHHHHHHHTST---------TCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHHHHHHHT-TCEEEEEC
T ss_pred HHHHHHHHHHHHHhC---------CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHc-CCEEEEEe
Confidence 368999999 99875 2567899999999999999998 899999999999999999988876 99999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCc
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSF 252 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~ 252 (483)
+++ ++|.+|++++++++... +.++|+|+ |+||||.+.+ +++|.++|+ +|++||+|++|+...... .
T Consensus 107 ~~~-~~~~~d~~~l~~~i~~~---~~~tk~v~---~~~~~G~~~~---~~~i~~la~-~~~~vi~D~a~a~g~~~~-~-- 172 (377)
T 3ju7_A 107 ISI-DDWYMDKTVLWDKIEEL---KEEVAIVV---PYATFGSWMN---LEEYEELEK-KGVPVVVDAAPGFGLMNG-G-- 172 (377)
T ss_dssp BCT-TTCSBCHHHHHHHHHHH---GGGEEEEC---CBCGGGBCCC---CHHHHHHHH-TTCCBEEECTTCTTCEET-T--
T ss_pred cCC-ccCCcCHHHHHHHHhcC---CCCceEEE---EECCCCCccC---HHHHHHHHh-cCCEEEEECCCccCCeEC-C--
Confidence 874 46899999999998431 01288776 7889999988 777888888 999999999997432111 1
Q ss_pred chHHHhhhhccccCCCeEEEEecC--ccccCCCCceEEEEEecChHHHHHHHHhhhcC--------------CCChHHHH
Q 011570 253 VSIAEIIDQDIACNRNLIHIVYSL--SKDMGFPGFRVGIIYSYNDQVVSCARKMSSFG--------------LVSSQTQH 316 (483)
Q Consensus 253 ~s~~~l~~~~~~~~~~~vi~~~S~--SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~--------------~~s~~~q~ 316 (483)
..+... -.+ +.+.|| +|.++ +| +.|+++++++.+.+.++.+...+ .++.+...
T Consensus 173 ~~~g~~-------~~d--~~~~S~~~~K~l~-~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa 241 (377)
T 3ju7_A 173 MHYGQD-------FSG--MIIYSFHATKPFG-IG-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAA 241 (377)
T ss_dssp EETTTT-------CSS--EEEEECBTTSSSC-CB-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHH
T ss_pred EeccCC-------CCc--EEEEECCCCCcCC-CC-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHH
Confidence 111000 012 334454 69997 45 68899987888877776654421 13334333
Q ss_pred HHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCC---ceeecCCc--e--EEEeeecCchhhccChHHHHHHHHHH
Q 011570 317 LIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVG---IGCLKSNA--G--LFLWMDLHHLLKEQTYEAEMALWRVI 389 (483)
Q Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g---i~~~~~~~--g--~f~~~~l~~~~~~~~~~~~~~~~~~L 389 (483)
++...+.. +....++.++.++++.+.|.+++ +.+.+..+ . .|+.+.++... ...++.+.|
T Consensus 242 ~~~~~l~~-------l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L 308 (377)
T 3ju7_A 242 IGIATMKK-------WDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEV------RNKQVIEDL 308 (377)
T ss_dssp HHHHHHHT-------HHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTS------CHHHHHHHH
T ss_pred HHHHHHHH-------HHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChh------hHHHHHHHH
Confidence 33333322 23333344555566666676653 33332221 1 13344454311 122556655
Q ss_pred HHhcCeEeeCCCC--CCCC--------C---------CCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 390 INEVKLNVSPGSS--FHCP--------N---------PGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 390 l~~~gV~v~pg~~--f~~~--------~---------~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
. ++||.++.+.. +... . .+.+||.+.. .++++++.+++.|++++.+.
T Consensus 309 ~-~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~~ 375 (377)
T 3ju7_A 309 K-KQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVSA 375 (377)
T ss_dssp H-TTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC-----
T ss_pred H-HCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 5 56999887641 1100 0 1359999965 69999999999998877653
No 215
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.89 E-value=2.4e-21 Score=197.52 Aligned_cols=156 Identities=16% Similarity=0.206 Sum_probs=125.7
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH----hhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----RWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----~~~~G~~~~~v 171 (483)
..++++.+|++++. .+.|+ ++++++++..++.+++++||+|+++.|+|+.+...+ +. .|++++.+
T Consensus 60 ~~~l~~~la~~~g~---------~~~v~-~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~-~g~~~~~~ 128 (421)
T 2ctz_A 60 VDVLEKRLAALEGG---------KAALA-TASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKR-LGIEVRFT 128 (421)
T ss_dssp HHHHHHHHHHHHTC---------SEEEE-ESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHH-TTCEEEEC
T ss_pred HHHHHHHHHHHhCC---------CceEE-ecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHH-cCCEEEEE
Confidence 47899999998761 23454 455599999999999999999999999999877765 44 49999888
Q ss_pred -ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccc-ccCccCCC
Q 011570 172 -VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIY-AATVFTKE 249 (483)
Q Consensus 172 -~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay-~~~~~~~~ 249 (483)
+.+ |++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++| +.. +..
T Consensus 129 ~~~~-------d~~~l~~~i~~------~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g-~~~- 190 (421)
T 2ctz_A 129 SREE-------RPEEFLALTDE------KTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGG-YLL- 190 (421)
T ss_dssp CTTC-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGG-TSC-
T ss_pred CCCC-------CHHHHHHhhcc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccc-ccC-
Confidence 643 78999988863 7899999999999999999 888999999999999999999 532 322
Q ss_pred CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEec
Q 011570 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSY 293 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~ 293 (483)
.. + .. ...+++.|+||.+|.+|.|+|++++.
T Consensus 191 ~~---~-~~---------~~Di~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 191 RP---L-AW---------GAALVTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp CG---G-GG---------TCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred Cc---c-cc---------CCeEEEECCcccccCCCCcEEEEEEe
Confidence 21 1 11 34578899999999899999988884
No 216
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.89 E-value=1.4e-22 Score=207.77 Aligned_cols=287 Identities=15% Similarity=0.150 Sum_probs=183.7
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHH-hcCCCCeEEEeCCCCcChHHHHhh---hcCcEEEE
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFC-LADPGDAFLVPTPYYPGFDRDLRW---RTGVQLVP 170 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~-l~~~gd~Vlv~~P~y~~~~~~~~~---~~G~~~~~ 170 (483)
|..++.+++.+.+.+.+| .+++++++++|++.++..+..+ ..++||+|+++.|+|+.+...++. ..|++++.
T Consensus 105 g~~~~~~~~~~~la~~~g----~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~ 180 (438)
T 1wyu_A 105 GVLQATFEYQTMIAELAG----LEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLT 180 (438)
T ss_dssp HHHHHHHHHHHHHHHHHT----SSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHHHHHHHHhC----CCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEE
Confidence 444555555555555555 4677899999999443333333 357899999999999988766543 14999999
Q ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcc---ccccCccC
Q 011570 171 VVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDE---IYAATVFT 247 (483)
Q Consensus 171 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~De---ay~~~~~~ 247 (483)
++.+ ++.+|+++ +. +++++|++++| ||||.+.+ +++|+++|+++|+++|+|- +|+. +.
T Consensus 181 v~~~---~~~~d~~~----i~------~~t~~v~i~~p-n~tG~~~~---l~~i~~la~~~g~~vivd~d~~a~g~--~~ 241 (438)
T 1wyu_A 181 LPLE---GGRTPLPE----VG------EEVGAVVVQNP-NFLGALED---LGPFAEAAHGAGALFVAVADPLSLGV--LK 241 (438)
T ss_dssp ECCB---TTBCCCCC----CC------TTEEEEEEESS-CTTSBCCC---HHHHHHHHHHTTCEEEEECCTTGGGT--BC
T ss_pred EcCc---CCccCHHH----hC------CCeEEEEEECC-CCCeEEec---HHHHHHHHHHcCCEEEEEechhhccC--cC
Confidence 9872 34677766 32 37899999999 99999997 8888999999999999552 2321 11
Q ss_pred CCCCcchHHHhhhhccccCCCeEEEEecCcccc----CCCCceEEEEEecChHHHHHHH---------------------
Q 011570 248 KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDM----GFPGFRVGIIYSYNDQVVSCAR--------------------- 302 (483)
Q Consensus 248 ~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~----g~~GlRiG~li~~~~~l~~~~~--------------------- 302 (483)
....+ +..+++.| ||.| ++.|.++||++++++ +.+.+.
T Consensus 242 ------~~~~~---------g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~~~l~ 304 (438)
T 1wyu_A 242 ------PPGAY---------GADIAVGD-GQSLGLPMGFGGPHFGFLATKKA-FVRQLPGRLVSETVDVEGRRGFILTLQ 304 (438)
T ss_dssp ------CHHHH---------TCSEEEEE-CTTTTCCCGGGCSCCEEEEECGG-GGGGCCSCCEEEEEBTTSCEEEEECCG
T ss_pred ------CCccC---------CCCEEEEC-CcccCCCccCCCCCeeEEEEcHH-HHHhCCCceeccccccCCCcceeeecc
Confidence 11122 22244555 5654 356779999999543 332221
Q ss_pred -------HhhhcCCC---ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecCCceEEEeeecC
Q 011570 303 -------KMSSFGLV---SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKSNAGLFLWMDLH 371 (483)
Q Consensus 303 -------~~~~~~~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~ 371 (483)
......++ +......++..+.... .+.+++..+++.++++++.+.|+++ |+++..+. .+|.++.+.
T Consensus 305 ~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~--~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~ 381 (438)
T 1wyu_A 305 AREQYIRRAKAKSNITTNAQLTALMGAMYLAALG--PEGLREVALKSVEMAHKLHALLLEVPGVRPFTPK-PFFNEFALA 381 (438)
T ss_dssp GGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCS-SBCSEEEEE
T ss_pred ccccccchhcccCCccchHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCC-CeEEEEEEe
Confidence 00111112 1122111111121111 2235667778888999999999998 99887654 334333332
Q ss_pred chhhccChHHHHHHHHHHHHhcCeEe--eCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHH
Q 011570 372 HLLKEQTYEAEMALWRVIINEVKLNV--SPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFM 434 (483)
Q Consensus 372 ~~~~~~~~~~~~~~~~~Ll~~~gV~v--~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l 434 (483)
... ...++.+.|.+ +||.+ .++..|. ++++||+++. .+++++++++++|++++
T Consensus 382 ~~~------~~~~~~~~L~~-~gi~v~~~~~~~~~---~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 382 LPK------DPEAVRRALAE-RGFHGATPVPREYG---ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp CSS------CHHHHHHHHHH-TTCCCCEECCTTSC---SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred CCC------CHHHHHHHHHH-CCceeccccccccC---CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 111 12377888875 59998 7777664 6799999975 58999999999998764
No 217
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.89 E-value=3.5e-22 Score=202.72 Aligned_cols=257 Identities=15% Similarity=0.129 Sum_probs=179.1
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE---eCChhHHHHHHHHHhcCCCCeEEEeC-CCCcChHHHH---
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM---SGGATGAHETVAFCLADPGDAFLVPT-PYYPGFDRDL--- 160 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i---t~G~~~al~~~~~~l~~~gd~Vlv~~-P~y~~~~~~~--- 160 (483)
..|++. |..+|++.+|++++ .+..++ ++|+++++..++.++++|||+|++++ |.|+.+...+
T Consensus 68 y~y~~~-~~~~Le~~lA~l~g----------~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~ 136 (427)
T 3i16_A 68 YGYGDI-GRDSLDAVYARVFN----------TESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGIT 136 (427)
T ss_dssp TCTTCH-HHHHHHHHHHHHHT----------CSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCS
T ss_pred CCCCHH-HHHHHHHHHHHHhC----------CcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhcc
Confidence 346554 57888888888876 223344 78889999999999999999999999 9999887443
Q ss_pred --------hhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeC----CCCCCcCCCCHHHHHHHHHHH
Q 011570 161 --------RWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITN----PSNPLGTFLDRETLKDIVSFI 228 (483)
Q Consensus 161 --------~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~----P~NPtG~~~~~~~l~~i~~~a 228 (483)
+.. |++++.++++++ +.+|++++++++++ .+++|+|++++ |+||||.+ .++++|+++|
T Consensus 137 ~~~~~~~l~~~-G~~~~~v~~~~~--g~~D~e~l~~~l~~----~~~tklV~i~~s~~~p~nptg~i---~dl~~i~~la 206 (427)
T 3i16_A 137 ENSNMGSLKEF-GINYKQVDLKED--GKPNLEEIEKVLKE----DESITLVHIQRSTGYGWRRALLI---EDIKSIVDCV 206 (427)
T ss_dssp CCCSSCCTGGG-TCEEEECCCCTT--SSCCHHHHHHHHHT----CTTEEEEEEECSCCSSSSCCCCH---HHHHHHHHHH
T ss_pred ccchHHHHHHc-CCEEEEecCccC--CCcCHHHHHHHhhC----CCCCEEEEEEcCCCCCCCCcccH---HHHHHHHHHH
Confidence 443 999999998653 47899999999872 12799999999 99999876 5699999999
Q ss_pred hh--cCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHhh
Q 011570 229 NE--KNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKMS 305 (483)
Q Consensus 229 ~~--~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~~ 305 (483)
++ +|+++|+|++|+.+.+.. .+ . .+ +..++++|+||.+|.+| .+.||+++ ++.+.+.+....
T Consensus 207 ~~~~~g~~livD~a~~~~~~~~-~p-~---~~---------gaDiv~~S~sK~lgg~g~~~gG~i~~-~~~li~~l~~~~ 271 (427)
T 3i16_A 207 KNIRKDIICFVDNCYGEFMDTK-EP-T---DV---------GADLIAGSLIKNIGGGIAPTGGYLAG-TKDCIEKTSYRL 271 (427)
T ss_dssp HHHCTTSEEEEECTTTTTSSSS-CG-G---GG---------TCSEEEEETTSGGGTTTCCSCEEEEE-CHHHHHHHHHHH
T ss_pred HHhCCCCEEEEECCCccccccC-Cc-c---cc---------CCeEEEecCcccCCCCCCceEEEEEE-CHHHHHHHHHhc
Confidence 99 999999999998764333 21 1 11 34588999999998555 66799999 566666655422
Q ss_pred h-c--CC-CCh-HHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCce----EEEeeecCchhhc
Q 011570 306 S-F--GL-VSS-QTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAG----LFLWMDLHHLLKE 376 (483)
Q Consensus 306 ~-~--~~-~s~-~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g----~f~~~~l~~~~~~ 376 (483)
. . +. +++ +. ++..+++.. .....+.++..+++.++.+.|+++|+++++.... ..+.+.+...
T Consensus 272 ~~~~~g~~~~~~~~--~a~~~l~gl----~~~~~r~~~~~~~a~~la~~L~~~g~~V~p~~~~~~~~~i~~i~l~~~--- 342 (427)
T 3i16_A 272 TVPGIGGECGSTFG--VVRSMYQGL----FLAPHISMEALKGAILCSRIMELAGFEVMPKYDEKRSDIIQSIKFNDK--- 342 (427)
T ss_dssp SCTTTGGGCCCCTT--CHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSCEEEECSSH---
T ss_pred ccCccCccCCccHH--HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCCccEEEEEEECCH---
Confidence 1 1 11 111 11 011111111 1235566777888899999999999888654322 2555666531
Q ss_pred cChHHHHHHHHHHHHh
Q 011570 377 QTYEAEMALWRVIINE 392 (483)
Q Consensus 377 ~~~~~~~~~~~~Ll~~ 392 (483)
+....|++.|...
T Consensus 343 ---~~~~~f~~~l~~~ 355 (427)
T 3i16_A 343 ---DKLIEFCKGIQTG 355 (427)
T ss_dssp ---HHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHhhc
Confidence 2344677776654
No 218
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.88 E-value=1e-20 Score=190.78 Aligned_cols=290 Identities=14% Similarity=0.095 Sum_probs=191.3
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHh-------cCCCCeEEEeCCCCcChHHHHhh
Q 011570 90 FQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCL-------ADPGDAFLVPTPYYPGFDRDLRW 162 (483)
Q Consensus 90 Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l-------~~~gd~Vlv~~P~y~~~~~~~~~ 162 (483)
|.+..+..++++++|++++ . +++++++++++++..++.++ +++||+|+++.|+|..+...+..
T Consensus 30 ~~~~~~~~~l~~~la~~~~--------~--~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~~ 99 (390)
T 3b8x_A 30 FTMGEYVKQYETQFAKTFG--------S--KYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQQ 99 (390)
T ss_dssp CSSCHHHHHHHHHHHHHHT--------C--SEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHC--------C--CcEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHHHH
Confidence 4445578999999999986 1 25677777778999999998 88999999999999999998887
Q ss_pred hcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccc
Q 011570 163 RTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYA 242 (483)
Q Consensus 163 ~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~ 242 (483)
. |.+++.++++++ +|.+|++.|++++.+ ++++|+++| ++|...+ +++|.++|+++|+++|+|++|+
T Consensus 100 ~-g~~~~~~~~~~~-~~~~d~~~l~~~i~~------~~~~v~~~~---~~g~~~~---~~~i~~l~~~~~~~li~D~a~~ 165 (390)
T 3b8x_A 100 Y-GLRVKFVDIDIN-TLNIDIESLKEAVTD------STKAILTVN---LLGNPNN---FDEINKIIGGRDIILLEDNCES 165 (390)
T ss_dssp T-TCEEEEECBCTT-TCSBCHHHHHHHCCT------TEEEEEEEC---GGGCCCC---HHHHHHHHTTSCCEEEEECTTC
T ss_pred c-CCEEEEEecCcc-ccCcCHHHHHHHhCc------CCeEEEEEC---CccChhh---HHHHHHHHHHcCCEEEEECcCc
Confidence 5 999999998754 478999999998853 789998885 4555555 8889999999999999999998
Q ss_pred cCccCCCCCcchHHHhhhhccccCCCeEEEEe--cCccccCCCCceEEEEEecChHHHHHHHHhhhcC------------
Q 011570 243 ATVFTKESSFVSIAEIIDQDIACNRNLIHIVY--SLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFG------------ 308 (483)
Q Consensus 243 ~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~--S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~------------ 308 (483)
...... .. .+. ...++... ..+|.++ +| +.|+++++++.+.+.++.....+
T Consensus 166 ~g~~~~-~~-----~~g-------~~~~~~~~s~~~~k~~~-~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~ 230 (390)
T 3b8x_A 166 MGATFN-NK-----CAG-------TFGLMGTFSSFYSNHIA-TM-EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVT 230 (390)
T ss_dssp TTCEET-TE-----ETT-------SSSSEEEEECCTTSSSC-SS-SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTT
T ss_pred ccCEEC-Cc-----ccc-------cccceEEEEccCCCCCc-cC-CceEEEeCCHHHHHHHHHHHhcCCCcccccccccc
Confidence 421111 10 010 01112211 2345553 33 34999996656655544322111
Q ss_pred -----------------C----CChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CceeecC--CceE
Q 011570 309 -----------------L----VSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-GIGCLKS--NAGL 364 (483)
Q Consensus 309 -----------------~----~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-gi~~~~~--~~g~ 364 (483)
. ++.+...++...+ +++++..++.++.++++.+.|.++ |+++..+ ..++
T Consensus 231 ~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l-------~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 303 (390)
T 3b8x_A 231 GVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL-------KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSW 303 (390)
T ss_dssp EECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCC
T ss_pred ccccccccccccceeccccccCcCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCccc
Confidence 0 2333333222222 224556667778888899999887 7776543 2333
Q ss_pred -EEeeecCchhhccChHHHHHHHHHHHHhcCeEeeC---CCCCCC-C--C-----------------CCEEEEEecc-CC
Q 011570 365 -FLWMDLHHLLKEQTYEAEMALWRVIINEVKLNVSP---GSSFHC-P--N-----------------PGWFRVCFAN-MD 419 (483)
Q Consensus 365 -f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV~v~p---g~~f~~-~--~-----------------~~~iRis~~~-~~ 419 (483)
.+++.++.... . ...++.+.|. ++||.+++ |+.+.. + . .+.+||++.. .+
T Consensus 304 ~~~~i~~~~~~~-~---~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t 378 (390)
T 3b8x_A 304 FGFSFIIKKDSG-V---IRKQLVENLN-SAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIEL 378 (390)
T ss_dssp CEEEEEECTTSC-C---CHHHHHHHHH-HTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCC
T ss_pred EEEEEEecCcCc-c---cHHHHHHHHH-HCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCC
Confidence 35556652100 0 1235666665 56999886 332211 0 0 1359999976 59
Q ss_pred HHHHHHHHHHH
Q 011570 420 DRTMEIALSRI 430 (483)
Q Consensus 420 ~e~l~~~l~~L 430 (483)
+++++.+++.|
T Consensus 379 ~~di~~i~~~l 389 (390)
T 3b8x_A 379 FDEIDYLREVL 389 (390)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhh
Confidence 99999998876
No 219
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.88 E-value=7.9e-22 Score=199.36 Aligned_cols=254 Identities=16% Similarity=0.116 Sum_probs=178.7
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE---eCChhHHHHHHHHHhcCCCCeEEEeC-CCCcChHHHH---
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM---SGGATGAHETVAFCLADPGDAFLVPT-PYYPGFDRDL--- 160 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i---t~G~~~al~~~~~~l~~~gd~Vlv~~-P~y~~~~~~~--- 160 (483)
..|++. |..+|++.+|++++ .+..++ ++|+++++..++.++++|||+|+++. |.|..+...+
T Consensus 54 ~~y~~~-~~~~Le~~lA~l~g----------~e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~ 122 (409)
T 3jzl_A 54 YGYDDE-GRDTLERVYATVFK----------TEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIR 122 (409)
T ss_dssp TCTTCH-HHHHHHHHHHHHHT----------CSEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSS
T ss_pred CCCChh-HHHHHHHHHHHHhC----------CCcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcc
Confidence 456654 57888998888876 234444 88899999999999999999999998 9999887543
Q ss_pred -------hhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeC----CCCCCcCCCCHHHHHHHHHHHh
Q 011570 161 -------RWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITN----PSNPLGTFLDRETLKDIVSFIN 229 (483)
Q Consensus 161 -------~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~----P~NPtG~~~~~~~l~~i~~~a~ 229 (483)
+.. |++++.+++++ ++.+|++++++++++ ++++|++++ |+||||.+. ++++|+++|+
T Consensus 123 g~~~~~l~~~-G~~~~~v~~~~--~g~~d~e~l~~ai~~------~tklV~i~~s~g~p~nptg~v~---~l~~I~~la~ 190 (409)
T 3jzl_A 123 KQGQGSLKDF-HIGYSSVPLLE--NGDVDFPRIAKKMTP------KTKMIGIQRSRGYADRPSFTIE---KIKEMIVFVK 190 (409)
T ss_dssp SSSSSCTGGG-TCEEEECCCCT--TSCCCHHHHHHHCCT------TEEEEEEECSCTTSSSCCCCHH---HHHHHHHHHH
T ss_pred cchhhHHHHc-CCEEEEeCCCC--CCCcCHHHHHHhccC------CCeEEEEECCCCCCCCCcCccc---cHHHHHHHHH
Confidence 444 99999999865 468999999998863 789999999 999998774 5899999999
Q ss_pred h--cCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHhh-
Q 011570 230 E--KNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKMS- 305 (483)
Q Consensus 230 ~--~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~~- 305 (483)
+ +|+++|+|++|+.+.+.. .+ .. .+.+++++|+||.+|.+| .+.||+++ ++.+.+.+....
T Consensus 191 ~~~~~~~livD~a~~~~~~~~-~p-~~------------~g~Div~~S~sK~lgg~~~~~GG~v~~-~~~li~~l~~~~~ 255 (409)
T 3jzl_A 191 NINPEVIVFVDNCYGEFVEYQ-EP-PE------------VGADIIAGSLIKNPGGGLAKTGGYIAG-KEALVDLCGYRLT 255 (409)
T ss_dssp HHCTTCEEEEECTTCTTTSSC-CS-GG------------GTCSEEEEETTSGGGTTTCSSCEEEEE-CHHHHHHHHHHHS
T ss_pred hhCCCCEEEEeCCcccccccC-Cc-cc------------cCCeEEEECccccCCccCCceEEEEEe-CHHHHHHHHHHhc
Confidence 9 999999999998764333 21 11 134588999999998555 44699999 566666655422
Q ss_pred h--cC--CCChHH-HHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCc----eEEEeeecCchhhc
Q 011570 306 S--FG--LVSSQT-QHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNA----GLFLWMDLHHLLKE 376 (483)
Q Consensus 306 ~--~~--~~s~~~-q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~----g~f~~~~l~~~~~~ 376 (483)
. .+ ....+. ..++...+ .....++++..+++.++.+.|+++|+++++... ...+.+.+.+.
T Consensus 256 ~~~~g~~~g~~~~~~~~~l~gl-------~~~~~r~~~~~~~a~~la~~L~~~g~~v~p~~~~~~~~~i~~i~l~~~--- 325 (409)
T 3jzl_A 256 TPGIGREAGASLYSLLEMYQGF-------FLAPHVTAQAIKGARFTAAMLAEFGVEADPVWDAPRTDLIQSVSFHNK--- 325 (409)
T ss_dssp CTTTGGGCCCCTTCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSCCEEECSCH---
T ss_pred cccccccccccHHHHHHHHHHH-------hhHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCccEEEEEEeCCH---
Confidence 1 10 111111 12222211 123455666788889999999999988865422 22455566531
Q ss_pred cChHHHHHHHHHHHHh
Q 011570 377 QTYEAEMALWRVIINE 392 (483)
Q Consensus 377 ~~~~~~~~~~~~Ll~~ 392 (483)
+....|++.|...
T Consensus 326 ---~~~~~~~~~L~~~ 338 (409)
T 3jzl_A 326 ---EKMVAFAQAIQAA 338 (409)
T ss_dssp ---HHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHhc
Confidence 2344677777654
No 220
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.88 E-value=1.1e-21 Score=199.07 Aligned_cols=254 Identities=17% Similarity=0.131 Sum_probs=177.3
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCCCcEEE---eCChhHHHHHHHHHhcCCCCeEEEeC-CCCcChHHH----
Q 011570 88 AIFQDYHGLPEFRNAVAKFMGKVRGNRITFDPDRIVM---SGGATGAHETVAFCLADPGDAFLVPT-PYYPGFDRD---- 159 (483)
Q Consensus 88 ~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~~~i~i---t~G~~~al~~~~~~l~~~gd~Vlv~~-P~y~~~~~~---- 159 (483)
..|+++ |..+|++.+|++++ .+..++ ++|+++++..++.++++|||+|++++ |.|..+...
T Consensus 69 y~Y~~~-g~~~Le~~lA~l~g----------~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~ 137 (427)
T 3hvy_A 69 YGYNDI-GRDSLDRVYANIFN----------TESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMD 137 (427)
T ss_dssp TCTTCH-HHHHHHHHHHHHHT----------CSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCC
T ss_pred CCCCch-hHHHHHHHHHHHhC----------CCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccc
Confidence 456655 67888888888876 234455 78889999999999999999999999 999887633
Q ss_pred -------HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeC----CCCCCcCCCCHHHHHHHHHHH
Q 011570 160 -------LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITN----PSNPLGTFLDRETLKDIVSFI 228 (483)
Q Consensus 160 -------~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~----P~NPtG~~~~~~~l~~i~~~a 228 (483)
++.. |++++.++. + ++.+|++++++++++ .+++|+|++++ |+||||.+ .++++|+++|
T Consensus 138 ~~~~~~~l~~~-G~~~~~v~~-~--~~~~d~e~l~~~i~~----~~~tklV~i~~s~gyp~nptg~v---~dl~~i~~ia 206 (427)
T 3hvy_A 138 DSKKVGSLREY-GVKYKMVDL-K--DGKVDINTVKEELKK----DDSIKLIHIQRSTGYGWRKSLRI---AEIAEIIKSI 206 (427)
T ss_dssp TTCCSCCTGGG-TCEEEECCC-B--TTBCCHHHHHHHHHH----CTTEEEEEEESSCCSSSSCCCCH---HHHHHHHHHH
T ss_pred cchhhhHHHHc-CCEEEEecC-C--CCCcCHHHHHHHhhC----CCCCEEEEEECCCCCCCCccccH---HHHHHHHHHH
Confidence 3444 999999987 2 467999999999973 13799999999 99999876 5599999999
Q ss_pred hh--cCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHhh
Q 011570 229 NE--KNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKMS 305 (483)
Q Consensus 229 ~~--~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~~ 305 (483)
++ +|+++|+|++|+.+.+.. .+ . . .+..++++|+||.+|.+| .+.||+++ ++.+.+.+....
T Consensus 207 ~~~~~g~~livD~a~~~~~~~~-~p-~---~---------~gaDiv~~S~sK~lgg~g~~~GG~i~~-~~~li~~l~~~~ 271 (427)
T 3hvy_A 207 REVNENVIVFVDNCYGEFVEEK-EP-T---D---------VGADIIAGSLIKNIGGGIATTGGYIAG-KEEYVTQATFRV 271 (427)
T ss_dssp HHHCSSSEEEEECTTCTTTSSS-CG-G---G---------GTCSEEEEETTSGGGTTTCCSCEEEEE-CHHHHHHHHHHH
T ss_pred HHhCCCCEEEEECCccccccCC-CC-c---c---------cCCeEEEECCcccccccccceEEEEEE-CHHHHHHHHHHh
Confidence 99 899999999998764333 21 1 1 134588999999998544 45689998 566666665432
Q ss_pred h-cCC---CCh-HH-HHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCce----EEEeeecCchhh
Q 011570 306 S-FGL---VSS-QT-QHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAG----LFLWMDLHHLLK 375 (483)
Q Consensus 306 ~-~~~---~s~-~~-q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g----~f~~~~l~~~~~ 375 (483)
. .+. .++ +. ..++..-+ .....+.++..++..++.+.|+++|+++++.... ..+.+.+...
T Consensus 272 ~~~~~g~~~~~~~~~a~~~~~gl-------~~~~~r~~~~~~~a~~la~~L~~~g~~V~p~~~~~~~~li~~~~l~~~-- 342 (427)
T 3hvy_A 272 TVPGIGGECGSTFGVMRSLYEGL-------FMAPHVTIEAVKGAVFCARIMELAGFDVLPKYNDKRTDIIQAIKFNDE-- 342 (427)
T ss_dssp SCTTTGGGCCCCTTCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSEEEEECSSH--
T ss_pred hcCCcccccCCCHHHHHHHHHhH-------hHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCCceEEEEEeCCCH--
Confidence 1 110 111 22 11221111 1234556677888889999999999888654322 2566666531
Q ss_pred ccChHHHHHHHHHHHH
Q 011570 376 EQTYEAEMALWRVIIN 391 (483)
Q Consensus 376 ~~~~~~~~~~~~~Ll~ 391 (483)
+....|++.|..
T Consensus 343 ----~~~~~f~~~l~~ 354 (427)
T 3hvy_A 343 ----KKLIDFIKGIQT 354 (427)
T ss_dssp ----HHHHHHHHHHHH
T ss_pred ----HHHHHHHHHhcc
Confidence 223466666654
No 221
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.88 E-value=8.9e-22 Score=211.57 Aligned_cols=309 Identities=12% Similarity=0.043 Sum_probs=195.6
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH-HhhhcCcEEEEeecC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD-LRWRTGVQLVPVVCD 174 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~-~~~~~G~~~~~v~~~ 174 (483)
..++++.+|++++ . ...+++++|+++++..++.+++++||.|+++.|+|.++... +... |++++.++.+
T Consensus 175 i~e~e~~lA~~~g--------a-e~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~-Ga~~v~v~~~ 244 (730)
T 1c4k_A 175 AVAAEKHAARVYN--------A-DKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMA-GGRPVYLQTN 244 (730)
T ss_dssp HHHHHHHHHHHTT--------C-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTT-CCEEEEECEE
T ss_pred HHHHHHHHHHHHC--------C-CcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHC-CCEEEEEeCC
Confidence 5789999999876 2 24588999999999999999999999999999999988887 6664 9999988765
Q ss_pred CCCCcc----cCHHHH-----HHHHHHH-Hh--cCCce-eEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcccc
Q 011570 175 SSNDFK----VTMEAL-----EAAYEKA-QE--SNIRI-KGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIY 241 (483)
Q Consensus 175 ~~~~~~----~d~~~l-----~~~i~~~-~~--~~~~~-~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay 241 (483)
.+ +|. +|++.| ++++++. .. ...++ ++|++++| ||||.+.+ +++|+++|+++|+++|+||+|
T Consensus 245 ~~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeAh 319 (730)
T 1c4k_A 245 RN-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSAW 319 (730)
T ss_dssp EC-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECTT
T ss_pred cc-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEccc
Confidence 32 333 688888 7766531 00 01112 89999999 58999988 889999999999999999999
Q ss_pred ccC-ccCCCCCcc--hHHHhhhhccccCCCeEEEEecCccccCCCCceE-EEEEecChHH--------HHHHHHh-hhc-
Q 011570 242 AAT-VFTKESSFV--SIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRV-GIIYSYNDQV--------VSCARKM-SSF- 307 (483)
Q Consensus 242 ~~~-~~~~~~~~~--s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRi-G~li~~~~~l--------~~~~~~~-~~~- 307 (483)
+.. .|.. ... +...... . ..+.++++++.|+||++ +|++. |+++.+++.+ ...+... ..+
T Consensus 320 ~~~~~f~~--~~~g~~~l~~~~-~-g~D~~~~iv~~S~hK~L--~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~ 393 (730)
T 1c4k_A 320 VGYEQFIP--MMRNSSPLLIDD-L-GPEDPGIIVVQSVHKQQ--AGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFM 393 (730)
T ss_dssp CCGGGSSG--GGGGGCTTSCCC-C-CTTSCEEEEEECHHHHS--SCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHS
T ss_pred ccccccCc--ccCCcCcccccc-c-CCCCCCEEEEECCCCCC--CCCCCEEEEEecchhhcCcccccCHHHHHHHHHHhC
Confidence 743 2332 111 1111100 0 00235789999999986 56665 4665543322 1122221 111
Q ss_pred -CCCChHHHHHHH---HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceeecCC--------------------
Q 011570 308 -GLVSSQTQHLIA---TMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ--VGIGCLKSN-------------------- 361 (483)
Q Consensus 308 -~~~s~~~q~~~~---~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~--~gi~~~~~~-------------------- 361 (483)
+..+.....++. .++... ...+..+++.++.+.+++.|.+ .|+++..+.
T Consensus 394 stsp~~~~iaal~aA~~~l~~~-----~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~ 468 (730)
T 1c4k_A 394 STSPFYPMYAALDVNAAMQEGE-----AGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNID 468 (730)
T ss_dssp CSSCCHHHHHHHHHHHHHHSHH-----HHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGG
T ss_pred CCCCcHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccch
Confidence 223333333222 222221 1233345566666777788877 377665432
Q ss_pred -----------------ce-EE-----EeeecCch--h----hccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEE
Q 011570 362 -----------------AG-LF-----LWMDLHHL--L----KEQTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFR 412 (483)
Q Consensus 362 -----------------~g-~f-----~~~~l~~~--~----~~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iR 412 (483)
.+ ++ +.+.+|.. . ..... ....+.+.|.+ +||.+... +.+.+|
T Consensus 469 ~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~-~~~~l~~~L~e-~GI~v~~~------~~~~ir 540 (730)
T 1c4k_A 469 YWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGV-PATIVANYLRD-HGIIPEKS------DLNSIL 540 (730)
T ss_dssp GGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCC-CHHHHHHHHHH-TTCCCSEE------CSSEEE
T ss_pred hhccCccchhccccccCCcccccCCeEEEEEeCCcccccccccccCC-CHHHHHHHHHH-CCcEEEEC------CCCeEE
Confidence 11 22 45555420 0 00011 12356666665 59987643 245799
Q ss_pred EEecc-CCHHHHHHHHHHHHHHHHHhh
Q 011570 413 VCFAN-MDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 413 is~~~-~~~e~l~~~l~~L~~~l~~~~ 438 (483)
++++. .++++++.++++|+++.+...
T Consensus 541 ~~~s~g~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 541 FLMTPAETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 99865 589999999999999887663
No 222
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.88 E-value=1.6e-21 Score=201.63 Aligned_cols=345 Identities=12% Similarity=0.109 Sum_probs=211.2
Q ss_pred CCCCcccccchhhh--hc--HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcCC
Q 011570 44 NPNGVIQMGLAENL--LC--HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFDP 119 (483)
Q Consensus 44 ~~~~~i~l~~~~n~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~~ 119 (483)
....+||+..+... ++ ++.+.+++.+.... .. ......|+. ....+|++++++.+.+..+ ...
T Consensus 61 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~-----~~---~~~~~~~~~-~~~~~l~~~la~~l~~~~~----~~~ 127 (472)
T 1ohv_A 61 DGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNV-----ST---FINRPALGI-LPPENFVEKLRESLLSVAP----KGM 127 (472)
T ss_dssp TSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGH-----HH---HHCCCCTTT-SCBTTHHHHHHHTGGGGCC----TTC
T ss_pred CCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhh-----cc---ccccccccc-ccHHHHHHHHHHHHHHhCC----CCc
Confidence 34568899877543 22 45566655541100 00 001112432 2357899999997776533 357
Q ss_pred CcEEEeCChhHHHHHHHHHhc--------C-----------------CC---CeEEEeCCCCcChHHHHhhhcCcE----
Q 011570 120 DRIVMSGGATGAHETVAFCLA--------D-----------------PG---DAFLVPTPYYPGFDRDLRWRTGVQ---- 167 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~--------~-----------------~g---d~Vlv~~P~y~~~~~~~~~~~G~~---- 167 (483)
++|++++|+++|+..++.++. . || +.|++.+++|+++........|..
T Consensus 128 ~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~ 207 (472)
T 1ohv_A 128 SQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHK 207 (472)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHH
T ss_pred CEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccc
Confidence 899999999999999998763 1 46 899999999987665443322321
Q ss_pred ---------EEEeecC--C-CCC--c-----ccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcC-CCCHHHHHHHHHH
Q 011570 168 ---------LVPVVCD--S-SND--F-----KVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGT-FLDRETLKDIVSF 227 (483)
Q Consensus 168 ---------~~~v~~~--~-~~~--~-----~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~-~~~~~~l~~i~~~ 227 (483)
.+++|.. . ... + ..|++.|+++|++....+.++++|++...+|+||. +.+.+.+++|.++
T Consensus 208 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l 287 (472)
T 1ohv_A 208 IDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDI 287 (472)
T ss_dssp TTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHH
T ss_pred cCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHH
Confidence 1223210 0 000 1 12688898888754222226777777666888997 5689999999999
Q ss_pred HhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhc
Q 011570 228 INEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSF 307 (483)
Q Consensus 228 a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~ 307 (483)
|++||+++|+||+|.++.+.+ .+.+...+.- ..... +.||||.+ ++| ||++ ++.+.. ......+
T Consensus 288 ~~~~g~lli~DEv~~g~g~~g--~~~~~~~~gv-----~~~~D--i~t~sK~~-l~G---G~~~--~~~~~~-~~~~~~~ 351 (472)
T 1ohv_A 288 SRKHGCAFLVDEVQTGGGSTG--KFWAHEHWGL-----DDPAD--VMTFSKKM-MTG---GFFH--KEEFRP-NAPYRIF 351 (472)
T ss_dssp HHHTTCEEEEECTTTTTTTTS--SSSGGGGGCC-----SSCCS--EEEECGGG-SSE---EEEE--CGGGSC-SSSSSSC
T ss_pred HHHhCCEEEEeCcccCCCCCC--CchhccccCC-----CCCCC--EEEEcccc-ccC---CccC--chhhcc-ccccccc
Confidence 999999999999998643332 2223222210 10011 34899995 455 7776 343321 1111111
Q ss_pred --CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcC-----C-ceeecCCceEEEeeecCchhhccCh
Q 011570 308 --GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQV-----G-IGCLKSNAGLFLWMDLHHLLKEQTY 379 (483)
Q Consensus 308 --~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-----g-i~~~~~~~g~f~~~~l~~~~~~~~~ 379 (483)
...+++++.++.++|+.. .+ ....++++++++++.+.|.++ + +....+.| .|++++++..
T Consensus 352 ~T~~~~~~~~aaa~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g-~~~~~~~~~~------ 419 (472)
T 1ohv_A 352 NTWLGDPSKNLLLAEVINII---KR--EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRG-TFCSFDTPDE------ 419 (472)
T ss_dssp CSSSSCHHHHHHHHHHHHHH---HH--TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEET-TEEEEECSSH------
T ss_pred CccCccHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCc-eEEEEEeCCh------
Confidence 235777887776666421 11 123345555556666666543 1 33344554 5777787642
Q ss_pred HHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 011570 380 EAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLK 436 (483)
Q Consensus 380 ~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~ 436 (483)
.....++..|++ +||.+.|+. .+++||+++. .+++++++++++|++++++
T Consensus 420 ~~~~~~~~~l~~-~Gv~~~~~g------~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 420 SIRNKLISIARN-KGVMLGGCG------DKSIRFRPTLVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp HHHHHHHHHHHH-TTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHH-CCeEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 123478888885 699998852 4689998875 5999999999999998864
No 223
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.86 E-value=5.7e-21 Score=194.64 Aligned_cols=253 Identities=17% Similarity=0.137 Sum_probs=170.7
Q ss_pred HHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeC-CCCcChHHHHh----------hhcCcEE
Q 011570 100 RNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPT-PYYPGFDRDLR----------WRTGVQL 168 (483)
Q Consensus 100 r~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~-P~y~~~~~~~~----------~~~G~~~ 168 (483)
++++.+++.+.+| .+....+++++ ++++++..++.++++|||+|+++. |+|..+...+. .. |+++
T Consensus 67 ~~~l~~~la~~~g--~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~-G~~~ 142 (431)
T 3ht4_A 67 RDTLEKVYADVFG--AEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEY-NIGY 142 (431)
T ss_dssp HHHHHHHHHHHTT--CSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGG-TCEE
T ss_pred HHHHHHHHHHHhC--CCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHc-CCEE
Confidence 4455555544444 21122234455 568999999999999999999998 99999886553 33 9999
Q ss_pred EEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEe-CCCCCCcCCCCHHHHHHHHHHHhh--cCcEEEEccccccCc
Q 011570 169 VPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLIT-NPSNPLGTFLDRETLKDIVSFINE--KNIHLVCDEIYAATV 245 (483)
Q Consensus 169 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~-~P~NPtG~~~~~~~l~~i~~~a~~--~~~~iI~Deay~~~~ 245 (483)
+.++.++ ++.+|+++|++++++ ++++|+++ +||||+|.+.+.+++++|+++|++ +|+++|+||+|+.+.
T Consensus 143 ~~v~~~~--~~~~d~e~l~~~l~~------~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~ 214 (431)
T 3ht4_A 143 NAVPLTE--GGLVDFEAVAAAIHS------NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFI 214 (431)
T ss_dssp EECCBCT--TSSBCHHHHHHHCCT------TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTS
T ss_pred EEeCCCC--CCCcCHHHHHhhcCC------CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhc
Confidence 9999875 468999999998863 78999999 599999999999999999999999 999999999999865
Q ss_pred cCCCCCcchHHHhhhhccccCCCeEEEEecCccccCC-CCceEEEEEecChHHHHHHHHhhhc---CC-CCh-HH-HHHH
Q 011570 246 FTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGF-PGFRVGIIYSYNDQVVSCARKMSSF---GL-VSS-QT-QHLI 318 (483)
Q Consensus 246 ~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~-~GlRiG~li~~~~~l~~~~~~~~~~---~~-~s~-~~-q~~~ 318 (483)
+.. .+ . . ....++++|+||.+|. .+...||+++ ++.+.+.+...... +. .++ +. ..++
T Consensus 215 ~~~-~~-~---~---------~g~Di~~~S~sK~lgg~~~~~GG~v~~-~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~ 279 (431)
T 3ht4_A 215 EEQ-EP-C---H---------VGADLMAGSLIKNPGGGIVKTGGYIVG-KEQYVEACAYRLTSPGIGAEAGASLYSLQEM 279 (431)
T ss_dssp SSC-CG-G---G---------TTCSEEEEETTSGGGTTTCSSCEEEEE-CHHHHHHHHHHHSCTTTTTSCSCCCSCSHHH
T ss_pred cCC-Cc-c---c---------cCCeEEEcCccccCCCCCCCceEEEEe-cHHHHHHHHHHhccCCcccccCccHHHHHHH
Confidence 443 21 1 1 1334789999999652 1133399999 56666655442211 10 111 11 1111
Q ss_pred HHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCC----ceEEEeeecCchhhccChHHHHHHHHHHHHh
Q 011570 319 ATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSN----AGLFLWMDLHHLLKEQTYEAEMALWRVIINE 392 (483)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~----~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~ 392 (483)
...+ .....+.++..++..++.+.|+++|+++.+.. .+..+.+.++.. ....++++.|.+.
T Consensus 280 ~~~l-------~~~~~~~~~~~~~a~~l~~~L~~~g~~v~p~~~~~~~~li~~i~l~~~------~~~~~~~~~l~~~ 344 (431)
T 3ht4_A 280 YQGF-------FLAPHVAGQALKGAIFTAAFLEKLGMNTSPAWNAPRTDLIQSVQFDDK------DRMIAFCQAIQYA 344 (431)
T ss_dssp HHHH-------HHHHHHHHHHHHHHHHHHHHHHHHTCCEESCTTSCCSSSCCEEECCCH------HHHHHHHHHHHHT
T ss_pred HhHh-------hhHHHHHHHHHHHHHHHHHHHHhCcCEecCCCCCCCccEEEEEEeCCH------HHHHHHHHHHHhc
Confidence 1111 11344556677788889999998888775432 223555666532 2234677777654
No 224
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.86 E-value=1e-20 Score=205.15 Aligned_cols=180 Identities=14% Similarity=0.159 Sum_probs=133.0
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS 175 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~ 175 (483)
..++++.++++++ ..+.+++++|+++++..++.++++|||.|+++.|+|.++...+... |++++.++.+.
T Consensus 207 v~~~ee~la~l~G---------~d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~-G~~~v~v~~~~ 276 (755)
T 2vyc_A 207 FGESEKYAARVFG---------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLT-GAKPVYMVPSR 276 (755)
T ss_dssp HHHHHHHHHHHHT---------CSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHH-CCEEEEECCCB
T ss_pred HHHHHHHHHHHhC---------CCceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHc-CCEEEEEeCCC
Confidence 4677777887776 2356889999999999999999999999999999999988888876 99999998764
Q ss_pred CCCcc----c-----CHHHHHHHHHHH----HhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccc
Q 011570 176 SNDFK----V-----TMEALEAAYEKA----QESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYA 242 (483)
Q Consensus 176 ~~~~~----~-----d~~~l~~~i~~~----~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~ 242 (483)
+ +|. + |++.|++++++. .+++.++++++++|| ||||.+.+ +++|+++|+++|++|++||+|+
T Consensus 277 ~-~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~ 351 (755)
T 2vyc_A 277 N-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWY 351 (755)
T ss_dssp C-TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTC
T ss_pred C-ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCc
Confidence 3 333 4 999999999752 112334569999999 79999988 8889999999999999999997
Q ss_pred cCc-cCCCC-CcchHHHhhhhccccCCCeEEEEecCccccCCCCce-EEEEEecCh
Q 011570 243 ATV-FTKES-SFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFR-VGIIYSYND 295 (483)
Q Consensus 243 ~~~-~~~~~-~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlR-iG~li~~~~ 295 (483)
... +.... +..++ ... ..+...++++++.|+||++ +|++ .|+++.+++
T Consensus 352 ~~~~~~~~~~~~~~~--~g~-~aD~~~~~~iv~~S~hK~L--~g~~~g~~i~~~~~ 402 (755)
T 2vyc_A 352 GYARFNPIYADHYAM--RGE-PGDHNGPTVFATHSTHKLL--NALSQASYIHVREG 402 (755)
T ss_dssp TTGGGCGGGTTSSSS--CSC-CCCCSSBEEEEEEETTTSS--SCCTTCEEEEEECC
T ss_pred hhcccCcccCCcchh--cCC-cCCccCCCeEEEECccccc--cCcCCeeeeeecCc
Confidence 532 32100 11111 110 0001236788999999985 5666 567766443
No 225
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.77 E-value=2.3e-23 Score=213.46 Aligned_cols=335 Identities=11% Similarity=0.052 Sum_probs=205.6
Q ss_pred CCCCCcccccchhhh--hc--HHHHHHHHhcCCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHhhhCCCCCcC
Q 011570 43 KNPNGVIQMGLAENL--LC--HELVEDWLMNNPKASICSAEGLNEFKGIAIFQDYHGLPEFRNAVAKFMGKVRGNRITFD 118 (483)
Q Consensus 43 ~~~~~~i~l~~~~n~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~~ia~~~~~~~g~~~~~~ 118 (483)
.....+||+..+... ++ .+.+.+++.+.... .....|+. ....+|.+.|++++. .
T Consensus 97 ~dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~-----------~~~~~~~~-~~~~~Lae~L~~~~p---------~ 155 (465)
T 2yky_A 97 VDGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAV-----------GLNLSTQT-ENEALFAEAVCDRFP---------S 155 (465)
Confidence 344567888877653 22 34444444332111 01123432 234667777776652 3
Q ss_pred CCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhh---hcCc--EEEEeecCCCCCcccCHHHHHHHHH
Q 011570 119 PDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRW---RTGV--QLVPVVCDSSNDFKVTMEALEAAYE 191 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~---~~G~--~~~~v~~~~~~~~~~d~~~l~~~i~ 191 (483)
.+.+++++++++++..++..+. ..++.|++.+++|.++...... ..|+ .++.++. -|++.|+++++
T Consensus 156 ~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~ 228 (465)
T 2yky_A 156 IDLVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLK 228 (465)
Confidence 5789999999999999987752 3458999999999775543220 0133 2333332 27888998886
Q ss_pred HHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeE
Q 011570 192 KAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLI 270 (483)
Q Consensus 192 ~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~v 270 (483)
+. +.++++|++...+|+||.++ +.+.+++|.++|++||+++|+||+|. +. .+ . ....... +..
T Consensus 229 ~~---~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r-~g-~-~~a~~~~---------gv~ 292 (465)
T 2yky_A 229 RH---GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SR-LS-G-GGAQEML---------GIS 292 (465)
Confidence 42 13677776654466699655 68889999999999999999999998 52 22 1 1111111 111
Q ss_pred EEEecCccccCCCCceEEEEEecChHHHHHHHH-------hhhcCCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHH
Q 011570 271 HIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK-------MSSFGLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERH 343 (483)
Q Consensus 271 i~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~-------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~ 343 (483)
.-+.||||.+| +|+|+||++++ +.+.+.+.. ....+..+++++.++.+.|+.-. + ....+++.++.
T Consensus 293 pDi~t~sK~lg-~G~piG~v~~~-~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~---~--~~~~~~~~~~~ 365 (465)
T 2yky_A 293 ADLTTLGKYIG-GGMSFGAFGGR-RDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIY---T--RQAASDLSASG 365 (465)
Confidence 22448999999 59999999995 555555433 11123467778877766665311 0 12233444444
Q ss_pred HHHHHhhhcC----CceeecCCceEEEeeecCc-hhhc------cChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEE
Q 011570 344 KAFTWGLSQV----GIGCLKSNAGLFLWMDLHH-LLKE------QTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFR 412 (483)
Q Consensus 344 ~~l~~~L~~~----gi~~~~~~~g~f~~~~l~~-~~~~------~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iR 412 (483)
+++.+.|+++ ++....+..|.++|+.++. .... ........++..+++ +||++.|+. |. .
T Consensus 366 ~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~-~GV~v~p~~-~~------~- 436 (465)
T 2yky_A 366 DRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLR-KGIYLAPRG-MY------A- 436 (465)
Confidence 5555555443 4433445567789998864 1100 000113367778885 599999876 32 1
Q ss_pred EEeccCCHHHHHHHHHHHHHHHHHhh
Q 011570 413 VCFANMDDRTMEIALSRITSFMLKNV 438 (483)
Q Consensus 413 is~~~~~~e~l~~~l~~L~~~l~~~~ 438 (483)
+++. .+++++++++++|++++++.+
T Consensus 437 ~s~~-~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 437 LSLE-IADAGRDAFAEALADFIGEQR 461 (465)
Confidence 6654 589999999999999987653
No 226
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.80 E-value=7.8e-19 Score=187.28 Aligned_cols=175 Identities=13% Similarity=0.148 Sum_probs=127.5
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS 175 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~ 175 (483)
..++++.+|++++ ....+++++|++.++..++.++++|||.|+++.|+|.++...+... |++++.++.+.
T Consensus 197 i~eaE~~lA~~fG---------a~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~ls-Ga~pv~v~~~~ 266 (715)
T 3n75_A 197 HKEAEQYIARVFN---------ADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMS-DVTPIYFRPTR 266 (715)
T ss_dssp HHHHHHHHHHHHT---------CSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHS-CCEEEEECCCB
T ss_pred HHHHHHHHHHHhC---------CCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHc-CCEEEEEeccc
Confidence 6789999999987 2356788899999999999999999999999999999999988875 99999998764
Q ss_pred CCCccc---------CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc-
Q 011570 176 SNDFKV---------TMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV- 245 (483)
Q Consensus 176 ~~~~~~---------d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~- 245 (483)
+ .|.+ |++.+++++++... .+.++++++++| ||+|.+++ +++|+++|+++ .+++||+|+...
T Consensus 267 ~-~~gi~~~i~~~~~d~e~Le~~l~~~~~-~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~--~livDEAH~~~~~ 338 (715)
T 3n75_A 267 N-AYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVK--SIHFDSAWVPYTN 338 (715)
T ss_dssp C-TTCCBCCCCGGGGSHHHHHHHHHHSTT-CCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCS--EEEEECTTCTTGG
T ss_pred c-ccccccCcccccCCHHHHHHHHhhCcC-ccCceEEEEECC-CCCCccCC---HHHHHHHhCcC--cEEEccccccccc
Confidence 3 4554 89999999976311 012348999999 99999999 66777777665 379999998653
Q ss_pred cCCCCCcchHHHhhhhccccCCCeE-EEEecCccccCCCCc-eEEEEEecCh
Q 011570 246 FTKESSFVSIAEIIDQDIACNRNLI-HIVYSLSKDMGFPGF-RVGIIYSYND 295 (483)
Q Consensus 246 ~~~~~~~~s~~~l~~~~~~~~~~~v-i~~~S~SK~~g~~Gl-RiG~li~~~~ 295 (483)
|.. .+.....+... ...+.+ +++.|+||+++ |+ ..|+++++++
T Consensus 339 f~~--~~~~~~al~~g---~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~ 383 (715)
T 3n75_A 339 FSP--IYEGKCGMSGG---RVEGKVIYETQSTHKLLA--AFSQASMIHVKGD 383 (715)
T ss_dssp GSG--GGTTSSTTSSS---CCTTCEEEEEECHHHHSS--CCTTCEEEEEESC
T ss_pred cCC--ccccccccccC---cCCCEEEEEEeccccccc--CCCCeeEEEeCch
Confidence 332 11111111100 012443 66899999974 44 3578888554
No 227
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.72 E-value=6e-17 Score=161.31 Aligned_cols=289 Identities=13% Similarity=0.128 Sum_probs=187.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCC-CcEEE-eCChhHHHHHHHHHhcCC--CCeEEEeCCCCcCh--HHHHhhhcCcEEE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDP-DRIVM-SGGATGAHETVAFCLADP--GDAFLVPTPYYPGF--DRDLRWRTGVQLV 169 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~-~~i~i-t~G~~~al~~~~~~l~~~--gd~Vlv~~P~y~~~--~~~~~~~~G~~~~ 169 (483)
+.+.|+.++++++ +++ ++|++ |.|+|+++++++..++.+ ||+|++..-++.+. ...++.. |..++
T Consensus 60 ~~~ar~~la~ll~--------~~~~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~-G~~~~ 130 (377)
T 3e77_A 60 INNTENLVRELLA--------VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKF-GTINI 130 (377)
T ss_dssp HHHHHHHHHHHHT--------CCTTEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHHHHHHHHTTT-SEEEE
T ss_pred HHHHHHHHHHHhC--------CCCCCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHHHHHHHHHHh-CCceE
Confidence 3566777777776 333 57888 579999999999998865 89988776654332 2233443 87777
Q ss_pred EeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC
Q 011570 170 PVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE 249 (483)
Q Consensus 170 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~ 249 (483)
.++.++ ++..+++.++.++. +++++|.+++-.|.||.+.+. +|+++|+++++|.+.+ +..
T Consensus 131 ~~~~~~--~~~~~~~~~~~~i~------~~t~lV~~~h~et~tG~~~pi--------i~~~~~~~~~vD~~q~---~g~- 190 (377)
T 3e77_A 131 VHPKLG--SYTKIPDPSTWNLN------PDASYVYYCANETVHGVEFDF--------IPDVKGAVLVCDMSSN---FLS- 190 (377)
T ss_dssp CSCCCS--SSCSCCCGGGCCCC------TTCSCEEEESEETTTTEECSS--------CCCCTTCCEEEECTTT---TTS-
T ss_pred EeccCC--CcCCCCChHHhccC------CCccEEEEeCccCchheEchh--------hhccCCCEEEEEcccc---cCC-
Confidence 777654 33456666654443 478999999888999999994 3678899999999987 333
Q ss_pred CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHH----------H---HHHHHhhhcCCCChHHHH
Q 011570 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQV----------V---SCARKMSSFGLVSSQTQH 316 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l----------~---~~~~~~~~~~~~s~~~q~ 316 (483)
.+ .++.. .+ ++..|..|.+|.+| +|+++..++.+ . ...+....+++.+.....
T Consensus 191 ~~-id~~~---------~~--~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~ 256 (377)
T 3e77_A 191 KP-VDVSK---------FG--VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIY 256 (377)
T ss_dssp SC-CCGGG---------CS--EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHH
T ss_pred CC-Cchhh---------cC--EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHH
Confidence 22 33222 23 35678899999888 67777744321 0 001111123444544444
Q ss_pred HHHHhcCChhHHHHH--HHHHHHHHHHHHHHHHHhhhcC-Cceeec----CCceEEEeeecCchhhccChHHHHHHHHHH
Q 011570 317 LIATMLSDDQFVEKF--IAESAKRIAERHKAFTWGLSQV-GIGCLK----SNAGLFLWMDLHHLLKEQTYEAEMALWRVI 389 (483)
Q Consensus 317 ~~~~~l~~~~~~~~~--~~~~~~~l~~~~~~l~~~L~~~-gi~~~~----~~~g~f~~~~l~~~~~~~~~~~~~~~~~~L 389 (483)
++.++++ ++.+. ++...++.++..+++.+.|.++ |+.+.+ ..++..+.+.++.......+ +..+...+
T Consensus 257 ~l~~al~---~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~~--~~~~l~~l 331 (377)
T 3e77_A 257 VMGLVLE---WIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDAL--EKRFLDKA 331 (377)
T ss_dssp HHHHHHH---HHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCCHHH--HHHHHHHH
T ss_pred HHHHHHH---HHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCchhH--HHHHHHHH
Confidence 5544443 22222 5666777788889999999987 776432 12334566666642110111 12455555
Q ss_pred HHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 390 INEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 390 l~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
. ++||.+++|... .+.+|+|+.. .++++++.+++.|++++++.
T Consensus 332 ~-~~Gi~~~~g~~~----~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 375 (377)
T 3e77_A 332 L-ELNMLSLKGHRS----VGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 375 (377)
T ss_dssp H-HTTEESCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred H-HCCcEEeCCCCc----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 5 569999988632 3569999976 59999999999999988764
No 228
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.72 E-value=1.1e-16 Score=160.15 Aligned_cols=287 Identities=10% Similarity=0.052 Sum_probs=184.6
Q ss_pred CcHHHHHHHHHHHHhhhCCCCCcC-CCcEEE-eCChhHHHHHHHHHhcCCCCeEEEeCCCCcC--hHHHHhhhcCcEEEE
Q 011570 95 GLPEFRNAVAKFMGKVRGNRITFD-PDRIVM-SGGATGAHETVAFCLADPGDAFLVPTPYYPG--FDRDLRWRTGVQLVP 170 (483)
Q Consensus 95 g~~~Lr~~ia~~~~~~~g~~~~~~-~~~i~i-t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~--~~~~~~~~~G~~~~~ 170 (483)
-+.+.|+.++++++ ++ +++|++ |.|+|+++++++..++.+||+|++..-++.+ +...++.. | ++..
T Consensus 73 ~~~~ar~~la~ll~--------~~~~~evif~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~~~~~~a~~~-G-~v~~ 142 (386)
T 3qm2_A 73 VAEEAEQDFRDLLN--------IPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKY-C-APQI 142 (386)
T ss_dssp CCHHHHHHHHHHHT--------CCTTEEEEEEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTT-S-EEEE
T ss_pred HHHHHHHHHHHHhC--------CCCCceEEEEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHHHHHHHHHHh-C-CeEE
Confidence 46889999999987 33 357888 6999999999999999999998765544332 22233443 8 8888
Q ss_pred eecC-CCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCC-CCHHHHHHHHHHHhhcCcEEEEccccccCccCC
Q 011570 171 VVCD-SSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTF-LDRETLKDIVSFINEKNIHLVCDEIYAATVFTK 248 (483)
Q Consensus 171 v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~ 248 (483)
++.+ .+.++.++++.++.++. +++++|.+++-.|.||.+ .+ +++|. +|+++++|-+.+ ++.
T Consensus 143 v~~~~~~~G~~~~~~~~~~~l~------~~t~lV~~~h~et~tG~~i~p---i~~i~-----~g~~~~vDa~qs---~g~ 205 (386)
T 3qm2_A 143 IDAKITVDGKRAVKPMREWQLS------DNAAYLHYCPNETIDGIAIDE---TPDFG-----PEVVVTADFSST---ILS 205 (386)
T ss_dssp EECEEEETTEEEECCGGGCCCC------TTCSCEEECSEETTTTEECCC---CCCCC-----TTCCEEEECTTT---TTS
T ss_pred EecCcccCCCCCCchHHHhhcC------CCCcEEEEECCcCCcCEecCc---hhhhc-----CCCEEEEEcccc---cCC
Confidence 8876 11233367777766654 378999999888999996 66 44442 799999999986 332
Q ss_pred CCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHH-------------HHHHHhhhcCCCChHHH
Q 011570 249 ESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVV-------------SCARKMSSFGLVSSQTQ 315 (483)
Q Consensus 249 ~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~-------------~~~~~~~~~~~~s~~~q 315 (483)
.+ .++.. .+ +.+.|..|.+|.+| +|+++..++.+. ........+++.+.+..
T Consensus 206 -~p-idv~~---------~~--~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i 270 (386)
T 3qm2_A 206 -AP-LDVSR---------YG--VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAW 270 (386)
T ss_dssp -SC-CCGGG---------CS--EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------CCSHH
T ss_pred -CC-CCccc---------cC--EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHH
Confidence 22 33322 23 34578999999777 788888543210 01111111233343444
Q ss_pred HHHHHhcCChhHHHHH--HHHHHHHHHHHHHHHHHhhhcCCc-eee-cC--CceEEEeeecCchhhccChHHHHHHHHHH
Q 011570 316 HLIATMLSDDQFVEKF--IAESAKRIAERHKAFTWGLSQVGI-GCL-KS--NAGLFLWMDLHHLLKEQTYEAEMALWRVI 389 (483)
Q Consensus 316 ~~~~~~l~~~~~~~~~--~~~~~~~l~~~~~~l~~~L~~~gi-~~~-~~--~~g~f~~~~l~~~~~~~~~~~~~~~~~~L 389 (483)
.++.++++ ++.+. ++...++.++.++++.+.|.++|+ ... .+ .....+.+.++.. ... ..+...
T Consensus 271 ~~l~~Al~---~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~----~~~--~~~~~~- 340 (386)
T 3qm2_A 271 YLSGLVFK---WLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADN----TLD--KVFLEE- 340 (386)
T ss_dssp HHHHHHHH---HHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSG----GGH--HHHHHH-
T ss_pred HHHHHHHH---HHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCc----ccc--HHHHHH-
Confidence 44444442 23332 566677788888999999988875 221 11 2223566666631 111 245555
Q ss_pred HHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 390 INEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 390 l~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
++++||.+++|... .+.+|+|+.. .++++++.+++.|+++.++.
T Consensus 341 L~~~gI~~~~g~~~----~~~iRiS~~~~~t~edId~l~~~l~~~~~~~ 385 (386)
T 3qm2_A 341 SFAAGLHALKGHRV----VGGMRASIYNAMPIEGVKALTDFMIDFERRH 385 (386)
T ss_dssp HHHTTEECCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCEEeCCCCC----cCeEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 45679999888643 2349999976 58999999999999987663
No 229
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.69 E-value=1.5e-15 Score=150.55 Aligned_cols=282 Identities=12% Similarity=0.155 Sum_probs=180.0
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcC-CCcEEE-eCChhHHHHHHHHHhcCCCCeEEEeCC-CCcC-hHHHHhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFD-PDRIVM-SGGATGAHETVAFCLADPGDAFLVPTP-YYPG-FDRDLRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~-~~~i~i-t~G~~~al~~~~~~l~~~gd~Vlv~~P-~y~~-~~~~~~~~~G~~~~~v 171 (483)
+.+.|+.++++++ ++ +++|++ |+|+|+++++++..++ +||++++..- .|.. +...++.. |+++..+
T Consensus 52 ~~~~r~~la~ll~--------~~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~-G~~v~~~ 121 (361)
T 3m5u_A 52 HFGAQEKAKKLYE--------LNDDYEVLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQIL-GVNVKTV 121 (361)
T ss_dssp HHHHHHHHHHHHT--------CCTTEEEEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHT-TCCEEEE
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHc-CCceEEE
Confidence 4566777787776 33 457887 9999999999999988 8886633222 2221 22334444 8999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCC
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESS 251 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~ 251 (483)
+.++.+.+.++++. + |+ +++++|.+++..|.||.+.+. +++ +|+++++|.+.+ +.. .+
T Consensus 122 ~~~~~g~~~~~~~~-~--l~------~~t~lv~~~~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~---~g~-~~ 179 (361)
T 3m5u_A 122 ASSEESNFDHIPRV-E--FS------DNADYAYICSNNTIYGTQYQN--------YPK-TKTPLIVDASSD---FFS-RK 179 (361)
T ss_dssp EECTTTTSCSCCCC-C--CC------TTSSEEEEESEETTTTEECSS--------CCC-CSSCEEEECGGG---TTS-SC
T ss_pred ecccCcCCCcCChh-h--cC------CCCCEEEEeCCCCCcceeCCc--------ccc-cCCEEEEEcccc---cCC-CC
Confidence 98875544345554 3 43 378999999888999998772 233 499999999986 332 22
Q ss_pred cchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHH---------------hhhcCCCChHHHH
Q 011570 252 FVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARK---------------MSSFGLVSSQTQH 316 (483)
Q Consensus 252 ~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~---------------~~~~~~~s~~~q~ 316 (483)
.++. +-.+++.|..|.+|.+| +|+++..++ +.+.+.. ...+++.+.....
T Consensus 180 -id~~-----------~~d~~~~s~~K~~gp~G--~g~l~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~ 244 (361)
T 3m5u_A 180 -VDFS-----------NIALFYGGVQKNAGISG--LSCIFIRKD-MLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIY 244 (361)
T ss_dssp -CCCT-----------TEEEEEEETTTTSSCTT--CEEEEEEHH-HHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHH
T ss_pred -CCcc-----------cCCEEEEechhccCCCc--cEEEEEcHH-HHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHH
Confidence 2211 12366789999999778 788888543 3322211 1112334444444
Q ss_pred HHHHhcCChhHHHHH--HHHHHHHHHHHHHHHHHhhhcCC-c-eeec-C--CceEEEeeecCchhhccChHHHHHHHHHH
Q 011570 317 LIATMLSDDQFVEKF--IAESAKRIAERHKAFTWGLSQVG-I-GCLK-S--NAGLFLWMDLHHLLKEQTYEAEMALWRVI 389 (483)
Q Consensus 317 ~~~~~l~~~~~~~~~--~~~~~~~l~~~~~~l~~~L~~~g-i-~~~~-~--~~g~f~~~~l~~~~~~~~~~~~~~~~~~L 389 (483)
++.++++ ++.+. ++...++.++..+++.+.|.+++ + .... + .....+.+.++.. .... .++...
T Consensus 245 ~l~~al~---~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~---~~~~--~~~~~~- 315 (361)
T 3m5u_A 245 MFNLEMD---WLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKN---KDLE--PLFVKE- 315 (361)
T ss_dssp HHHHHHH---HHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSC---TTHH--HHHHHH-
T ss_pred HHHHHHH---HHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCc---hhhh--HHHHHH-
Confidence 4444432 22222 45666777888889999998885 5 4432 1 1223555666631 0111 245544
Q ss_pred HHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 390 INEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 390 l~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
++++||.+++|... .+.+|+|+.. .++++++.+++.|+++.++.
T Consensus 316 L~~~gI~~~~g~~~----~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 360 (361)
T 3m5u_A 316 AEEAGMIGLKGHRI----LGGIRASIYNALNLDQVKTLCEFMKEFQGKY 360 (361)
T ss_dssp HHHTTEECCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCEEecCCCc----cCeEEEEccCCCCHHHHHHHHHHHHHHHHhc
Confidence 45679999888642 2459999976 59999999999999988764
No 230
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.67 E-value=3.2e-14 Score=141.65 Aligned_cols=319 Identities=15% Similarity=0.152 Sum_probs=190.6
Q ss_pred HHHHHHH-HHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCC----CCeEEEeCCCCcChHHHHhhhcCcEEEEee
Q 011570 98 EFRNAVA-KFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADP----GDAFLVPTPYYPGFDRDLRWRTGVQLVPVV 172 (483)
Q Consensus 98 ~Lr~~ia-~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~----gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~ 172 (483)
.|.+.++ +|+.. .| ++ +....++++|+|.++..++.+.+++ ||.|+++..+|.+...++... |++++.++
T Consensus 116 ~ltn~l~ld~L~~-~G--~~-~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~-Gl~Pv~V~ 190 (501)
T 3hl2_A 116 KITNSLVLDIIKL-AG--VH-TVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITA-GFEPVVIE 190 (501)
T ss_dssp HHHHHHHHHHHHH-TT--CT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHT-TCEEEEEC
T ss_pred HHHHHHHHHHHHH-cC--CC-CCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHc-CCeEEEEe
Confidence 4444444 44543 35 32 3456999999997777777676664 499999999999999998886 99999887
Q ss_pred cC-CCCCcccCHHHHHHHHHHHHhcCCceeEEEEeC-CCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCc-cCCC
Q 011570 173 CD-SSNDFKVTMEALEAAYEKAQESNIRIKGVLITN-PSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATV-FTKE 249 (483)
Q Consensus 173 ~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~-P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~-~~~~ 249 (483)
.. ++..+.+|++.++++|+++ +.+..++++++ |.|-.|.+-+ +++|+++|++||+++++|+||+... +..
T Consensus 191 p~~d~~~~~id~e~le~aI~e~---ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~gIpllVDeAhGah~~~~~- 263 (501)
T 3hl2_A 191 NVLEGDELRTDLKAVEAKVQEL---GPDCILCIHSTTSCFAPRVPDR---LEELAVICANYDIPHIVNNAYGVQSSKCM- 263 (501)
T ss_dssp EEEETTEEEECHHHHHHHHHHH---CGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTCTTCHHHH-
T ss_pred eeecccccCCCHHHHHHHHHhc---CCCcEEEEEecCCCCCCccccc---HHHHHHHHHHcCCeEEEeCcchhhhhhhh-
Confidence 62 1225789999999999875 22334444444 4554445555 9999999999999999999997542 111
Q ss_pred CCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHHH
Q 011570 250 SSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFVE 329 (483)
Q Consensus 250 ~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~ 329 (483)
.-+.+..++ . .-.+++.|..|.+-++ +..|.+...++.+.+.+....+-...++++....+.++.-+ .
T Consensus 264 ~lp~sA~~~-------G-rAD~vVqS~HK~llvp-IGG~ii~~~d~e~l~~~~~~yPGr~S~Spsldl~~tLL~lG---r 331 (501)
T 3hl2_A 264 HLIQQGARV-------G-RIDAFVQSLDKNFMVP-VGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLG---S 331 (501)
T ss_dssp HHHHHHHHH-------S-CCCEEEEEHHHHHCCC-SSCEEEEESCHHHHHHHHHTSCSCBCSHHHHHHHHHHHHHH---H
T ss_pred hhHHHHHhc-------C-CCcEEEecccccceee-cCceEEEeCCHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHH---H
Confidence 000112222 1 1345778999997433 33345556566555554332221223444443444443321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcC----Cceeec-CCceEEEeeecCchhhccChHHHHHHHHHHHHhcCe---E-eeCC
Q 011570 330 KFIAESAKRIAERHKAFTWGLSQV----GIGCLK-SNAGLFLWMDLHHLLKEQTYEAEMALWRVIINEVKL---N-VSPG 400 (483)
Q Consensus 330 ~~~~~~~~~l~~~~~~l~~~L~~~----gi~~~~-~~~g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~~gV---~-v~pg 400 (483)
+.+++..++..+..+++.+.|+++ |-++.. +.....+-+.+....... ...-..+-..|..+ +| . |.+|
T Consensus 332 ~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~-~~~~t~~gs~Lf~r-~vsG~Rvv~~~ 409 (501)
T 3hl2_A 332 NGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHR-DKAVTQLGSMLFTR-QVSGARVVPLG 409 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTT-SCHHHHHHHHHHHT-TCCSCEEECTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEecccccccc-cccHHHHHHHHHhc-CCCcceeecCC
Confidence 223444445555556666666553 545543 334455666665431111 11222445555543 44 3 4556
Q ss_pred C----------CCCCCC----CCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhhccC
Q 011570 401 S----------SFHCPN----PGWFRVCFAN-MDDRTMEIALSRITSFMLKNVEAKV 442 (483)
Q Consensus 401 ~----------~f~~~~----~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~~~~ 442 (483)
. .|+.-. ..|+=++.+- +++++++.++++|.+.+.+.+++.-
T Consensus 410 ~~~~i~g~~f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~~~ 466 (501)
T 3hl2_A 410 SMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKERS 466 (501)
T ss_dssp CCEEETTEEESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC---
T ss_pred CceEECCeeecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 5 454321 2366666543 6999999999999999998876543
No 231
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.64 E-value=4.3e-14 Score=140.05 Aligned_cols=305 Identities=14% Similarity=0.130 Sum_probs=185.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCC----cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH-----hhh--c
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPD----RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL-----RWR--T 164 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~----~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~-----~~~--~ 164 (483)
..++.....+...+.+| ++.. ||-..+|+ +|+..++.+|++|||+|+..+..++++...- ... .
T Consensus 98 vD~iE~la~~rak~lF~----a~~A~w~VNVQP~SGs-~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~s 172 (490)
T 3ou5_A 98 VDEIELLCQRRALEAFD----LDPAQWGVNVQPYSGS-PANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISAT 172 (490)
T ss_dssp HHHHHHHHHHHHHHHTT----CCTTTEEEECCCSSHH-HHHHHHHHHHCC-CCCEECBC---------------------
T ss_pred HHHHHHHHHHHHHHHhC----CCccccCCCCCcCCHH-HHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccc
Confidence 34555555566667776 4544 56666654 6777888999999999999988776654321 110 1
Q ss_pred C--cEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccc
Q 011570 165 G--VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYA 242 (483)
Q Consensus 165 G--~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~ 242 (483)
| .+.++++++.+ +..+|.+.+++..+++ ++|+|+..--.+|- .++ .+++.++|.+.|.++++|-+|.
T Consensus 173 g~~~~~~~Y~vd~~-t~~IDyd~~~~~A~~~-----kPklIi~G~SaY~r--~id---~~~~reIAd~vGA~Lm~DmAHi 241 (490)
T 3ou5_A 173 SIFFESMPYKLNPK-TGLIDYNQLALTARLF-----RPRLIIAGTSAYAR--LID---YARMREVCDEVKAHLLADMAHI 241 (490)
T ss_dssp -------CBCEETT-TTEECHHHHHHHHHHH-----CCSEEEECCSSCCS--CCC---HHHHHHHHHHHTCEEEEECGGG
T ss_pred cccccccccccCCC-CCcccHHHHHHHHhhc-----CCCeEEECCccCcc--ccC---HHHHHHHHhhcccEEEechhhh
Confidence 2 24555666543 4679999999998875 88987766444442 345 6677777778999999999995
Q ss_pred cCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecCh--------------HHHHHHHHhhhcC
Q 011570 243 ATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYND--------------QVVSCARKMSSFG 308 (483)
Q Consensus 243 ~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~--------------~l~~~~~~~~~~~ 308 (483)
...... ..+++.... ..|+..|.+|++ +|-|-|.|++.++ ++.+.+.....++
T Consensus 242 aGLVA~-g~~psP~~~----------ADvVTtTTHKTL--rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg 308 (490)
T 3ou5_A 242 SGLVAA-KVIPSPFKH----------ADIVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPS 308 (490)
T ss_dssp HHHHHT-TSSCCGGGT----------CSEEEEESSSTT--CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTT
T ss_pred hhhhcc-cccCCcccc----------ceEEeccccccc--cCCCceEEEeccccccccccccchhHHHHHHHHHhhcCcc
Confidence 443333 333343322 236788999997 8999999998542 3455555443332
Q ss_pred CC-ChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecC-CceEEEeeecCch-hhccChHHHHHH
Q 011570 309 LV-SSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKS-NAGLFLWMDLHHL-LKEQTYEAEMAL 385 (483)
Q Consensus 309 ~~-s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~-~~g~f~~~~l~~~-~~~~~~~~~~~~ 385 (483)
.. ++..-.+++.++.-.+.+....+...+++.++.+.|.+.|.+.|+++... ..+-.+++++... +. ...
T Consensus 309 ~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~t-------G~~ 381 (490)
T 3ou5_A 309 LQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLD-------GAR 381 (490)
T ss_dssp TCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCC-------HHH
T ss_pred ccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCCCeeecCCCCceEEEEeccccCCC-------HHH
Confidence 22 22222222222211111222345566777889999999999999988742 2234667888542 12 144
Q ss_pred HHHHHHhcCeEee----CCCCCCCCCCCEEEEEecc-----CCHHHHHHHHHHHHHHHHHh
Q 011570 386 WRVIINEVKLNVS----PGSSFHCPNPGWFRVCFAN-----MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 386 ~~~Ll~~~gV~v~----pg~~f~~~~~~~iRis~~~-----~~~e~l~~~l~~L~~~l~~~ 437 (483)
++.+|++.||.+. |+.. .+-.++.|||+... ..++++++..+-|.+++...
T Consensus 382 ae~~Le~agItvNkN~iP~D~-sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~~~ 441 (490)
T 3ou5_A 382 AERVLELVSITANKNTCPGDR-SAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIG 441 (490)
T ss_dssp HHHHHHHTTEECEEECCTTCC-CSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCcEECCCCCCCCC-CCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHHhh
Confidence 6677889999885 4431 11124569999843 47789999999998888643
No 232
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.63 E-value=2.6e-14 Score=145.34 Aligned_cols=296 Identities=14% Similarity=0.102 Sum_probs=173.3
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhh-----cCcEE
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWR-----TGVQL 168 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~-----~G~~~ 168 (483)
..+|.+.|++.+. ..+.|++++++++++..++.... ...++|+...-+|.+........ .....
T Consensus 129 ~~~lae~l~~~~p---------~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~ 199 (454)
T 4ao9_A 129 EGRLARLICERFP---------QIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDF 199 (454)
T ss_dssp HHHHHHHHHHHST---------TCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEE
T ss_pred HHHHHHHHHHhCC---------CCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCc
Confidence 3556565655542 46899999999999999887653 12367888888887643221110 01233
Q ss_pred EEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccccccCccC
Q 011570 169 VPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYAATVFT 247 (483)
Q Consensus 169 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~ 247 (483)
..+|. -|++.+++.+++. +.++.+|++.......|.+. +.+.+++|.++|++||+++|.||+..+ ..
T Consensus 200 ~~~p~-------nd~~~l~~~l~~~---~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~ 267 (454)
T 4ao9_A 200 LVLPY-------NDAQTARAQIERH---GPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RL 267 (454)
T ss_dssp EEECT-------TCHHHHHHHHHHT---GGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GG
T ss_pred ccCCC-------chHHHHHHHHhhc---CCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CC
Confidence 33332 2788999888763 33566666543355567654 677899999999999999999999964 33
Q ss_pred CCCCcchHHHhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHh-hhc-----CCCChHHHHHHHHh
Q 011570 248 KESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKM-SSF-----GLVSSQTQHLIATM 321 (483)
Q Consensus 248 ~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~-~~~-----~~~s~~~q~~~~~~ 321 (483)
+ .. .. ..... . .+| ++ +++|.+| .|+.+|.+++ .+++.+.+... ..+ +..++++.+++.+.
T Consensus 268 G-~~-~a-~e~~g-v---~PD--i~--t~gK~lg-gG~Piga~~~-~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~ 334 (454)
T 4ao9_A 268 A-PH-GL-ANKLG-I---RSD--LT--TLGKYIG-GGMSFGAFGG-RADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAG 334 (454)
T ss_dssp S-TT-CH-HHHHT-C---CCS--EE--EEEGGGG-TTSSCEEEEE-CHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHH
T ss_pred c-cc-cc-hhccC-C---CCc--EE--EeccccC-CCCcceeeee-HHHHHHHHhhccCCccccCCCCCCHHHHHHHHHH
Confidence 3 22 12 22211 0 223 22 7899998 8999999998 56666654321 111 22456666555444
Q ss_pred ---cCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecCCceEEEeeecCch-----hh--ccChHHHHHHHHHHHH
Q 011570 322 ---LSDDQFVEKFIAESAKRIAERHKAFTWGLSQVGIGCLKSNAGLFLWMDLHHL-----LK--EQTYEAEMALWRVIIN 391 (483)
Q Consensus 322 ---l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gi~~~~~~~g~f~~~~l~~~-----~~--~~~~~~~~~~~~~Ll~ 391 (483)
+.+++. .+.+.++-++++++ |.+.+.+.++......-|.++.+.+... .. .........++..+++
T Consensus 335 L~~l~~~~~-~~~~~~~g~~l~~~---L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~ 410 (454)
T 4ao9_A 335 LTKLFTPEA-AGALAERGEALRAR---LNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLN 410 (454)
T ss_dssp HHHTSCHHH-HHHHHHHHHHHHHH---HHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHH
T ss_pred HHHHhccCh-hHHHHHHHHHHHHH---HHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHH
Confidence 344432 22233333333322 2222233344333223344555555321 00 0111122356667775
Q ss_pred hcCeEeeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHhhh
Q 011570 392 EVKLNVSPGSSFHCPNPGWFRVCFANMDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 392 ~~gV~v~pg~~f~~~~~~~iRis~~~~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
+||++.|. +++.++.. +|++++++++++|++++.+...
T Consensus 411 -~Gv~~~p~--------~~~~~s~~-~T~~dId~~l~al~~~l~~~~a 448 (454)
T 4ao9_A 411 -EDIYSSPR--------GFVVLSLP-LTDADIDRYVAAIGSFIGGHGA 448 (454)
T ss_dssp -TTEECCTT--------CEEECCTT-CCHHHHHHHHHHHHHHHHHSGG
T ss_pred -CCEEEcCC--------CCEEEeCC-CCHHHHHHHHHHHHHHHHhccc
Confidence 59998764 23555554 6999999999999999987653
No 233
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.53 E-value=1.6e-12 Score=132.72 Aligned_cols=300 Identities=13% Similarity=0.075 Sum_probs=170.1
Q ss_pred CCcEEEeCChhHHHHHHHHHhc--CCCCeEEEeCCCCcChHHHHhhhcC-------------cEEEEeecCC----CCCc
Q 011570 119 PDRIVMSGGATGAHETVAFCLA--DPGDAFLVPTPYYPGFDRDLRWRTG-------------VQLVPVVCDS----SNDF 179 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~G-------------~~~~~v~~~~----~~~~ 179 (483)
.+.+++++++++|+..++.... .....|+....+|.+.........+ ..+..+|... ....
T Consensus 125 ~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~ 204 (456)
T 4atq_A 125 AKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPE 204 (456)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTT
T ss_pred CcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCc
Confidence 4579999999999999986531 2346889999888775432221111 1234444321 1111
Q ss_pred ccCHHHHHHHHHHHHh--cCCceeEEEEeCCCCCCcCC-CCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHH
Q 011570 180 KVTMEALEAAYEKAQE--SNIRIKGVLITNPSNPLGTF-LDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIA 256 (483)
Q Consensus 180 ~~d~~~l~~~i~~~~~--~~~~~~~i~l~~P~NPtG~~-~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~ 256 (483)
..+.+.++..+..... .+.++.+|++..-..-.|.+ .+.+.+++|.++|++||+++|.||+..++.-.+ .+....
T Consensus 205 ~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG--~~~a~e 282 (456)
T 4atq_A 205 ITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTG--EWFAVD 282 (456)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS--SSSGGG
T ss_pred ccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCcc--cccccc
Confidence 1234445444443222 12356666655435555654 567789999999999999999999998753333 223322
Q ss_pred HhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhh--hcCCCChHHHHHHHHhcCC---hhHHHHH
Q 011570 257 EIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMS--SFGLVSSQTQHLIATMLSD---DQFVEKF 331 (483)
Q Consensus 257 ~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~--~~~~~s~~~q~~~~~~l~~---~~~~~~~ 331 (483)
.+.- .+| |+ +++|.+| .|+.+|.+++ .+++.+.+.... ..+..++++.+++.+.|+- ++. .+.
T Consensus 283 ~~gv-----~PD--iv--t~gK~lg-gg~P~~av~~-~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l-~~~ 350 (456)
T 4atq_A 283 HEGV-----VPD--II--TMAKGIA-GGLPLSAITG-RADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDL-NGR 350 (456)
T ss_dssp GTTC-----CCS--EE--EECGGGG-TTSSCEEEEE-EHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTH-HHH
T ss_pred ccCC-----CCc--hh--hhhhccc-CcCCceeeEe-cHHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccH-HHH
Confidence 2211 223 33 6789998 9999999998 455554432211 1133567776666655532 221 222
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCceee--cCCceEEEeeecCchhh-ccChHHHHHHHHHHHHhcCeEeeCCCCCCCCCC
Q 011570 332 IAESAKRIAERHKAFTWGLSQVGIGCL--KSNAGLFLWMDLHHLLK-EQTYEAEMALWRVIINEVKLNVSPGSSFHCPNP 408 (483)
Q Consensus 332 ~~~~~~~l~~~~~~l~~~L~~~gi~~~--~~~~g~f~~~~l~~~~~-~~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~ 408 (483)
.++.-+.+.++.+.+.+.+...+.++. ...-|+++-+++..... .........+...+++ +||++.++.. ..
T Consensus 351 ~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~-~Gvl~~~~g~----~~ 425 (456)
T 4atq_A 351 ARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLK-EGVIILTCGT----YG 425 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHH-TTEECEEECT----TS
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHH-CCCEEEecCC----CC
Confidence 333333333333333332221111111 12235677777743211 1111223356777775 5999886532 23
Q ss_pred CEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 409 GWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 409 ~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
+.|||.... ++++++++++++|.++++..
T Consensus 426 ~~irl~PpL~it~~~id~~l~~l~~al~a~ 455 (456)
T 4atq_A 426 NVIRLLPPLVISDELLIDGLEVLAAAIKAH 455 (456)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 579999876 59999999999999998753
No 234
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.51 E-value=9.3e-12 Score=127.54 Aligned_cols=309 Identities=14% Similarity=0.162 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhc-------CCC-CeEEEeCCCCcChHHHHhhhcCc--
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLA-------DPG-DAFLVPTPYYPGFDRDLRWRTGV-- 166 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-------~~g-d~Vlv~~P~y~~~~~~~~~~~G~-- 166 (483)
.+....+|+.+.+..+ .+.+.|++++++++|+..++.... .++ .+|+....+|.+.........|.
T Consensus 110 ~~~~~~lAe~L~~~~p----~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~ 185 (473)
T 4e3q_A 110 SDQTVMLSEKLVEVSP----FDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPY 185 (473)
T ss_dssp EHHHHHHHHHHHHHSS----CSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGG
T ss_pred CHHHHHHHHHHHhhCC----CCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCcccccccccccc
Confidence 3455566666665432 345789999999999999987642 233 57888888887643322211111
Q ss_pred ---------EEEEeecCC------CCCc-----ccCHHHHHHHHHHHHhcCC-ceeEEEEeCCCCCCcCC-CCHHHHHHH
Q 011570 167 ---------QLVPVVCDS------SNDF-----KVTMEALEAAYEKAQESNI-RIKGVLITNPSNPLGTF-LDRETLKDI 224 (483)
Q Consensus 167 ---------~~~~v~~~~------~~~~-----~~d~~~l~~~i~~~~~~~~-~~~~i~l~~P~NPtG~~-~~~~~l~~i 224 (483)
..+.++.+. .+.. ....+++++.+.. ++. ++.+|++.....-.|.+ .+.+.+++|
T Consensus 186 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~---~~~~~iAavi~EPiqg~gG~~~p~~~fl~~l 262 (473)
T 4e3q_A 186 NSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQR---EGADTIAGFFAEPVMGAGGVIPPAKGYFQAI 262 (473)
T ss_dssp GGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHH---HCGGGEEEEEECSSBSTTTSBCCCTTHHHHH
T ss_pred ccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHh---hCCCceEEEEeCCccCCCCceeCCHHHHHHH
Confidence 122222211 0000 0012344555543 222 45444444335556765 466789999
Q ss_pred HHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHH
Q 011570 225 VSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARK 303 (483)
Q Consensus 225 ~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~ 303 (483)
.++|++||+++|.||+..++...+ .+.....+.- .+| ++ +++|.++ .| +.+|.+++ .+++.+.+..
T Consensus 263 r~lc~~~gilLI~DEV~tGfGRtG--~~fa~e~~gv-----~PD--i~--t~~K~l~-gG~~Pl~av~~-~~~i~~~~~~ 329 (473)
T 4e3q_A 263 LPILRKYDIPVISDEVICGFGRTG--NTWGCVTYDF-----TPD--AI--ISSKNLT-AGFFPMGAVIL-GPELSKRLET 329 (473)
T ss_dssp HHHHHHTTCCEEEECTTTSSSTTS--SSCHHHHTTC-----CCS--EE--EECGGGG-TTSSCCEEEEE-CHHHHHHHHH
T ss_pred HHHhcccceEEeccCccccCCccc--chhHHHhcCC-----CCC--hH--Hhccccc-CCCCCcccccc-cHHHHHHhcc
Confidence 999999999999999998843333 2233322211 223 22 6789998 66 99999999 5666665533
Q ss_pred h----hhc-----CCCChHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhc---C-CceeecCCceEEEeeec
Q 011570 304 M----SSF-----GLVSSQTQHLIATMLSDDQFVEKFIAESAKRIAERHKAFTWGLSQ---V-GIGCLKSNAGLFLWMDL 370 (483)
Q Consensus 304 ~----~~~-----~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~---~-gi~~~~~~~g~f~~~~l 370 (483)
. ..+ +..++++.+++.+.|+--. + +...++.++.-+++.+.|++ . .+.-.... |+++-+++
T Consensus 330 ~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG~-Gl~~giel 403 (473)
T 4e3q_A 330 AIEAIEEFPHGFTASGHPVGCAIALKAIDVVM--N---EGLAENVRRLAPRFEERLKHIAERPNIGEYRGI-GFMWALEA 403 (473)
T ss_dssp HHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHH--H---SSHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEE-TTEEEEEE
T ss_pred ccccccccccCCCCCCCcchhhhhhhhhhhhc--c---ccHHHHHHHHHHHHHHHHHHHhcCCCeeEEeec-ceEEEEEE
Confidence 1 111 2346666666555543211 0 11112223333334444433 2 33222223 45666766
Q ss_pred Cchhhc-----cChHHHHHHHHHHHHhcCeEeeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 371 HHLLKE-----QTYEAEMALWRVIINEVKLNVSPGSSFHCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 371 ~~~~~~-----~~~~~~~~~~~~Ll~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
...... ........+...++ ++||+++|.. +.+||+... ++++++++++++|.+++++...
T Consensus 404 v~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~g-------~~i~l~PPL~it~~eid~~~~~l~~al~~v~a 470 (473)
T 4e3q_A 404 VKDKASKTPFDGNLSVSERIANTCT-DLGLICRPLG-------QSVVLCPPFILTEAQMDEMFDKLEKALDKVFA 470 (473)
T ss_dssp CSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCccccccccccHHHHHHHHHHHH-HCCcEEEecC-------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 322111 01112335666666 4599998642 469998765 5999999999999999987643
No 235
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.50 E-value=5.1e-11 Score=120.11 Aligned_cols=320 Identities=15% Similarity=0.121 Sum_probs=180.0
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCC----CCeEEEeCCCCcChHHHHhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADP----GDAFLVPTPYYPGFDRDLRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~----gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v 171 (483)
...+.+.+..++-+..| ++ +....++++|+|.+...++.+.+++ ++.|+++..+|.++..++... |+..+.+
T Consensus 96 ~~~~e~~~~~~~~~~lG--lp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~-Gl~p~~v 171 (450)
T 3bc8_A 96 LNKITNSLVLNVIKLAG--VH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTA-GFEPVVI 171 (450)
T ss_dssp HHHHHHHHHHHHHHHHT--CT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHT-TCEEEEE
T ss_pred HHHHHHHHHHHHHHhCC--CC-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHc-CCeeEEE
Confidence 44677788888877777 22 3345788999985555444444443 899999999999999999886 9998888
Q ss_pred ecC-CCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCC
Q 011570 172 VCD-SSNDFKVTMEALEAAYEKAQESNIRIKGVLITNP-SNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKE 249 (483)
Q Consensus 172 ~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~ 249 (483)
+.. .+..+.+|++.|+++|++... +.+++++++| .+.+|.+-+ +++|+++|++||+++++|+||+.. +..
T Consensus 172 ~~~~~~~~~~id~~~le~aI~~~~~---~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~gi~l~VD~A~G~~-~~~- 243 (450)
T 3bc8_A 172 ENVLEGDELRTDLKAVEAKIQELGP---EHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQ-SSK- 243 (450)
T ss_dssp CCEEETTEEECCHHHHHHHHHHHCG---GGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTT-CHH-
T ss_pred EeeecCccCCcCHHHHHHHHHhcCC---CCEEEEEEECCcCCCceecC---HHHHHHHHHHCCCeEEEECCCchh-hhh-
Confidence 652 123678999999999987521 2456666777 455677777 999999999999999999999753 111
Q ss_pred CCcchHH-HhhhhccccCCCeEEEEecCccccCCCCceEEEEEecChHHHHHHHHhhhcCCCChHHHHHHHHhcCChhHH
Q 011570 250 SSFVSIA-EIIDQDIACNRNLIHIVYSLSKDMGFPGFRVGIIYSYNDQVVSCARKMSSFGLVSSQTQHLIATMLSDDQFV 328 (483)
Q Consensus 250 ~~~~s~~-~l~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~ 328 (483)
...+. +... ...-..++.|.+|++. .-.-.|++...++...+...........++++......++..+
T Consensus 244 --~~~l~~~a~~-----~~~AD~~v~S~HK~l~-a~~~~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~~~G--- 312 (450)
T 3bc8_A 244 --CMHLIQQGAR-----VGRIDAFVQSLDKNFM-VPVGGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLG--- 312 (450)
T ss_dssp --HHHHHHHHHH-----HSCCCEEEEEHHHHHS-CCSSCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHH---
T ss_pred --hHhHHHHHhc-----ccCCCEEEECCccCCC-chhccEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHHHHH---
Confidence 11111 1110 0122346679999975 4444677776555544443322111123455544443333221
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc----CCceeecCCc-eEEEeeecCchhhccChHHHHHHHHHHHHh--cCeEeeC--
Q 011570 329 EKFIAESAKRIAERHKAFTWGLSQ----VGIGCLKSNA-GLFLWMDLHHLLKEQTYEAEMALWRVIINE--VKLNVSP-- 399 (483)
Q Consensus 329 ~~~~~~~~~~l~~~~~~l~~~L~~----~gi~~~~~~~-g~f~~~~l~~~~~~~~~~~~~~~~~~Ll~~--~gV~v~p-- 399 (483)
.+.+.+..+...+..+++.+.+++ .|+.+..... +.-..+.++....... .+...+.-.+... .|..+.+
T Consensus 313 ~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~-~D~tkl~i~~~~~g~sG~~v~~~~ 391 (450)
T 3bc8_A 313 CSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHD-KAVTQLGSMLFTRQVSGARAVPLG 391 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSS-CHHHHHHHHHHHTTCCSCEEECSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeeccccccccc-CCCceeEEEecCCCCccceeeecc
Confidence 112233323333444444444433 3555543221 1111222332111111 1122333333322 1333321
Q ss_pred ------CC---CCCC----CCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHhhh
Q 011570 400 ------GS---SFHC----PNPGWFRVCFAN-MDDRTMEIALSRITSFMLKNVE 439 (483)
Q Consensus 400 ------g~---~f~~----~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~~~ 439 (483)
|. .|+. ....++=+.++. .++++++.++++|++++++.++
T Consensus 392 ~~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~ 445 (450)
T 3bc8_A 392 NVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRK 445 (450)
T ss_dssp CEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 11 1111 123455555543 5999999999999998776644
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.46 E-value=9e-13 Score=143.95 Aligned_cols=231 Identities=10% Similarity=0.072 Sum_probs=132.4
Q ss_pred HHHHHHHHHHH--hcCCceeEEEEeCC-CCCCcCCC-CHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhh
Q 011570 184 EALEAAYEKAQ--ESNIRIKGVLITNP-SNPLGTFL-DRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEII 259 (483)
Q Consensus 184 ~~l~~~i~~~~--~~~~~~~~i~l~~P-~NPtG~~~-~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~ 259 (483)
+.|++.|++.. ....++.+|++..- ++..|.++ +.+.+++|.++|++||+++|+||++.++...+ ..+ ....+.
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG-~~f-a~e~~g 654 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLG-VET-TTELLG 654 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTS-BSS-THHHHS
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCC-Cch-hhHhcC
Confidence 45666554311 11235666665543 68888765 78889999999999999999999998854444 332 322221
Q ss_pred hhccccCCCeEEEEecCccccCCCC-ceEEEEEecChHHHHHHHHh-------h-hcCCCChHHHHHHHHhcC---ChhH
Q 011570 260 DQDIACNRNLIHIVYSLSKDMGFPG-FRVGIIYSYNDQVVSCARKM-------S-SFGLVSSQTQHLIATMLS---DDQF 327 (483)
Q Consensus 260 ~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~li~~~~~l~~~~~~~-------~-~~~~~s~~~q~~~~~~l~---~~~~ 327 (483)
- .++ + -++||.+| .| +++|++++ ++.+.+.+... . ..+..++++++++.+.|+ +++.
T Consensus 655 v-----~PD-i---itlsK~L~-gG~~Plgav~~-~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l 723 (831)
T 4a0g_A 655 C-----KPD-I---ACFAKLLT-GGMVPLAVTLA-TDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPET 723 (831)
T ss_dssp S-----CCS-E---EEECGGGG-TTSSCCEEEEE-CHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTT
T ss_pred C-----CCc-E---EEEecccc-cCccCcEEEEE-CHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHH
Confidence 1 223 2 27999998 67 89999999 56666654321 1 113356677766655543 2221
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHhhhcC-CceeecCCceEEEeeecCchhhcc--ChHHHHHHHHHHHHhcCeEeeCCCCC
Q 011570 328 VEKFIAESAKRIAER-HKAFTWGLSQV-GIGCLKSNAGLFLWMDLHHLLKEQ--TYEAEMALWRVIINEVKLNVSPGSSF 403 (483)
Q Consensus 328 ~~~~~~~~~~~l~~~-~~~l~~~L~~~-gi~~~~~~~g~f~~~~l~~~~~~~--~~~~~~~~~~~Ll~~~gV~v~pg~~f 403 (483)
.+.+.+..+.+++. .+.+.+.+.+. .+...... |+++.+++....... .......+...+++ +||.++|+
T Consensus 724 -~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~-Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e-~Gv~v~p~--- 797 (831)
T 4a0g_A 724 -NHNITSQGKTLRELWDEELVQQISSHSAVQRVVVI-GTLFALELKADASNSGYASLYAKSLLIMLRE-DGIFTRPL--- 797 (831)
T ss_dssp -CTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEE-TTEEEEEEC---------CHHHHHHHHHHHH-TTEECCCB---
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeec-ccEEEEEEecCccccccchHHHHHHHHHHHH-CCcEEEec---
Confidence 11111111111110 11233444444 33333333 467777775321000 01123466777764 69999875
Q ss_pred CCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHh
Q 011570 404 HCPNPGWFRVCFAN-MDDRTMEIALSRITSFMLKN 437 (483)
Q Consensus 404 ~~~~~~~iRis~~~-~~~e~l~~~l~~L~~~l~~~ 437 (483)
.+.+||+... ++++++++++++|.+++++.
T Consensus 798 ----g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 798 ----GNVIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp ----TTEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred ----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 2589999654 59999999999999988654
No 237
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=82.99 E-value=8.2 Score=35.70 Aligned_cols=101 Identities=20% Similarity=0.223 Sum_probs=61.9
Q ss_pred CcEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 120 DRIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 120 ~~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
.-++||.| +.+|- .+...|.+.|-.|++..-.-......++.. |.+...+..|- -|.+++++.+++..++-.
T Consensus 30 KvalVTGa-s~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-g~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 30 KIAVITGA-TSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-GGGAVGIQADS-----ANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp CEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTCEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCc-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-CCCeEEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 34555554 44554 444678889988887765544445555665 77777777653 367777777766555434
Q ss_pred ceeEEEEeCC-CCCCcCC--CCHHHHHHHHHHH
Q 011570 199 RIKGVLITNP-SNPLGTF--LDRETLKDIVSFI 228 (483)
Q Consensus 199 ~~~~i~l~~P-~NPtG~~--~~~~~l~~i~~~a 228 (483)
++.. +++|. .++.+.+ ++.++++++.+.-
T Consensus 103 ~iDi-LVNNAG~~~~~~~~~~~~e~w~~~~~vN 134 (273)
T 4fgs_A 103 RIDV-LFVNAGGGSMLPLGEVTEEQYDDTFDRN 134 (273)
T ss_dssp CEEE-EEECCCCCCCCCTTSCCHHHHHHHHHHH
T ss_pred CCCE-EEECCCCCCCCChhhccHHHHHHHHHHH
Confidence 6764 45554 3333332 4778888887753
No 238
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=77.99 E-value=16 Score=32.76 Aligned_cols=102 Identities=18% Similarity=0.211 Sum_probs=59.5
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..+.-.
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 79 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-GKKARAIAADI-----SDPGSVKALFAEIQALTG 79 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-CTTEEECCCCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEcCC-----CCHHHHHHHHHHHHHHCC
Confidence 345666665554334455677788988888765544444444544 76777766653 257777777766544434
Q ss_pred ceeEEEEeCC-CCCCcC--CCCHHHHHHHHHH
Q 011570 199 RIKGVLITNP-SNPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 199 ~~~~i~l~~P-~NPtG~--~~~~~~l~~i~~~ 227 (483)
++..+| +|. ..+.+. -.+.++++++.+.
T Consensus 80 ~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 110 (247)
T 3rwb_A 80 GIDILV-NNASIVPFVAWDDVDLDHWRKIIDV 110 (247)
T ss_dssp CCSEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 566544 444 233332 3466777776664
No 239
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=76.59 E-value=22 Score=32.35 Aligned_cols=101 Identities=17% Similarity=0.181 Sum_probs=61.0
Q ss_pred CcEEEeCChhHHHHH-HHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 120 DRIVMSGGATGAHET-VAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 120 ~~i~it~G~~~al~~-~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
.-++||. ++.+|-. +...|.+.|-.|++.+-.-...... ++.. |.++..+..|- -|.+++++.+++..+
T Consensus 8 KvalVTG-as~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~-g~~~~~~~~Dv-----t~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 8 KVVIVTG-AGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM-GKEVLGVKADV-----SKKKDVEEFVRRTFE 80 (254)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEeC-CCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 3455554 4445544 4466778898888765443322222 3333 88888888764 367788877776655
Q ss_pred cCCceeEEEEeCCC--CCCcC--CCCHHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPS--NPLGT--FLDRETLKDIVSFI 228 (483)
Q Consensus 196 ~~~~~~~i~l~~P~--NPtG~--~~~~~~l~~i~~~a 228 (483)
+-.++. ++++|.. .+.+. -++.++++++.+.-
T Consensus 81 ~~G~iD-iLVNNAGi~~~~~~~~~~~~e~~~~~~~vN 116 (254)
T 4fn4_A 81 TYSRID-VLCNNAGIMDGVTPVAEVSDELWERVLAVN 116 (254)
T ss_dssp HHSCCC-EEEECCCCCCTTCCGGGCCHHHHHHHHHHH
T ss_pred HcCCCC-EEEECCcccCCCCChhhCCHHHHHHHHHHH
Confidence 434666 4556652 33342 36888888888753
No 240
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=75.97 E-value=22 Score=32.56 Aligned_cols=103 Identities=20% Similarity=0.213 Sum_probs=58.4
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
+...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++++++..+.-
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-GSKAFGVRVDV-----SSAKDAESMVEKTTAKW 99 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-CTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 3345666655544334455677788988887765443333444444 66666666553 25777777776654443
Q ss_pred CceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 198 IRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 198 ~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
.++..+ ++|.. .+.+. -.+.++++++.+.
T Consensus 100 g~iD~l-v~nAg~~~~~~~~~~~~~~~~~~~~v 131 (277)
T 4dqx_A 100 GRVDVL-VNNAGFGTTGNVVTIPEETWDRIMSV 131 (277)
T ss_dssp SCCCEE-EECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred CCCCEE-EECCCcCCCCCcccCCHHHHHHHHHH
Confidence 356644 44442 33332 3566777776653
No 241
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=75.07 E-value=12 Score=38.20 Aligned_cols=112 Identities=13% Similarity=0.165 Sum_probs=68.7
Q ss_pred CCcCCCcEEEeCChhHHHHHHHHHh---cCC---------C-C-----eEEEeCCCCcC-------------------hH
Q 011570 115 ITFDPDRIVMSGGATGAHETVAFCL---ADP---------G-D-----AFLVPTPYYPG-------------------FD 157 (483)
Q Consensus 115 ~~~~~~~i~it~G~~~al~~~~~~l---~~~---------g-d-----~Vlv~~P~y~~-------------------~~ 157 (483)
+.++++.|.|+.++..++...+++| +.. | . ..+...|.|+- +.
T Consensus 126 L~v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~i 205 (525)
T 3gh5_A 126 LITTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKRQI 205 (525)
T ss_dssp EEECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHH
T ss_pred EEEeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHHHH
Confidence 4567788999888877776666554 222 1 1 23556676631 22
Q ss_pred HHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEE
Q 011570 158 RDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVC 237 (483)
Q Consensus 158 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~ 237 (483)
+.+... +.++..+.+.++.+|.+..+.+-+.-.. |... .-..+.|..++.+++++|++.|+++|+-||-
T Consensus 206 d~mA~~-KlN~lH~HltDdqgwriei~~~P~Lt~~----Ga~~------~~~~~~~g~YT~~di~eIv~YA~~rgI~VIP 274 (525)
T 3gh5_A 206 DLASQY-KINKFHMHLSDDQGWRIEIKSWPDLIEI----GSKG------QVGGGPGGYYTQEQFKDIVSYAAERYIEVIP 274 (525)
T ss_dssp HHHHTT-TCCEEEEECBCSSCBCBCCTTSTHHHHT----TTSC------CTTSSCCCCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHc-CCcEEEEEeccCCccccccccchhhhhc----cCcc------ccCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 233333 7777777777666777665554433211 1110 0112346789999999999999999987764
No 242
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=74.86 E-value=27 Score=31.70 Aligned_cols=103 Identities=19% Similarity=0.183 Sum_probs=62.3
Q ss_pred CCCcEEEeCChhHHHHH-HHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHET-VAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~-~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
+-.-++|| |++.+|-. +...|.+.|-.|++..-.-...... +... |.++..+..|- -|.+++++.+++.
T Consensus 8 ~gKvalVT-Gas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~-g~~~~~~~~Dv-----~~~~~v~~~~~~~ 80 (255)
T 4g81_D 8 TGKTALVT-GSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK-GYDAHGVAFDV-----TDELAIEAAFSKL 80 (255)
T ss_dssp TTCEEEET-TCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-TCCEEECCCCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEe-CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeC-----CCHHHHHHHHHHH
Confidence 33345555 55555544 4467888998888876543322222 3333 77888877663 3678888888777
Q ss_pred HhcCCceeEEEEeCC-CCCCcC--CCCHHHHHHHHHHH
Q 011570 194 QESNIRIKGVLITNP-SNPLGT--FLDRETLKDIVSFI 228 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P-~NPtG~--~~~~~~l~~i~~~a 228 (483)
.++-.++.. +++|. .++.+. -++.++++++.+.-
T Consensus 81 ~~~~G~iDi-LVNNAG~~~~~~~~~~~~e~~~~~~~vN 117 (255)
T 4g81_D 81 DAEGIHVDI-LINNAGIQYRKPMVELELENWQKVIDTN 117 (255)
T ss_dssp HHTTCCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred HHHCCCCcE-EEECCCCCCCCChhhCCHHHHHHHHHHH
Confidence 666556774 55555 233333 24778888887753
No 243
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=74.56 E-value=26 Score=31.55 Aligned_cols=103 Identities=14% Similarity=0.126 Sum_probs=58.3
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..++-.
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-GPAAYAVQMDV-----TRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCT-----TCHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCCceEEEeeC-----CCHHHHHHHHHHHHHHcC
Confidence 345677666554334455677788988887765444344444444 55566666543 267777777776555545
Q ss_pred ceeEEEEeCCCCCCcC--CCCHHHHHHHHHH
Q 011570 199 RIKGVLITNPSNPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 199 ~~~~i~l~~P~NPtG~--~~~~~~l~~i~~~ 227 (483)
++..+|-+--..+.+. -.+.+++++..+.
T Consensus 82 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (259)
T 4e6p_A 82 GLDILVNNAALFDLAPIVEITRESYEKLFAI 112 (259)
T ss_dssp SCCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 6775443322222222 2466777666653
No 244
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=73.25 E-value=10 Score=38.43 Aligned_cols=108 Identities=10% Similarity=0.155 Sum_probs=64.1
Q ss_pred CCcCCCcEEEeCChhHHHHHHHHHhc---C--C-CC-----eEEEeCCCCcC-------------------hHHHHhhhc
Q 011570 115 ITFDPDRIVMSGGATGAHETVAFCLA---D--P-GD-----AFLVPTPYYPG-------------------FDRDLRWRT 164 (483)
Q Consensus 115 ~~~~~~~i~it~G~~~al~~~~~~l~---~--~-gd-----~Vlv~~P~y~~-------------------~~~~~~~~~ 164 (483)
+.++++.|.|+..+..++...+++|. . . |. ..+...|.|+- +.+.+...
T Consensus 96 L~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~mA~~- 174 (507)
T 2gjx_A 96 LTINDDQCLLLSETVWGALRGLETFSQLVWKSAEGTFFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYN- 174 (507)
T ss_dssp EEESSSCEEEEESSHHHHHHHHHHHHHHEEECTTCCEEEECEEEEECCSCSEEEEEEETTTSCCCHHHHHHHHHHHHHT-
T ss_pred EEEeCCeEEEEECCHHHHHHHHHHHHHHhhhccCCceeeccEEEeecCCcceeeeeeccCCCCCCHHHHHHHHHHHHHh-
Confidence 44677889999888777776666552 1 1 21 23444565521 11223332
Q ss_pred CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEE
Q 011570 165 GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVC 237 (483)
Q Consensus 165 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~ 237 (483)
+.++..+.+.++.+|.+....+.+.-.. |. ..|.|..++.+++++|++.|+++|+-||-
T Consensus 175 KlN~lh~HltDdq~wr~ei~~~P~Lt~~----Ga----------~~~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 175 KLNVFHWHLVDDPSFPYESFTFPELMRK----GS----------YNPVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp TCCEEEEECCCSSCCCBCCSSCTHHHHH----HS----------SCTTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCceEEEEEecccCeeeeccccchhhhc----cc----------cCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 6666666665555566554333222110 00 12446789999999999999999998774
No 245
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=73.18 E-value=45 Score=29.81 Aligned_cols=82 Identities=18% Similarity=0.116 Sum_probs=46.3
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......+.. +.++..+..|- -|.+.+++++++..+...
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 85 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-GNNCVFAPADV-----TSEKDVQTALALAKGKFG 85 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-CTTEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-CCceEEEEcCC-----CCHHHHHHHHHHHHHHCC
Confidence 345666655544334555667778888776654444444444444 55566666543 256777777765443333
Q ss_pred ceeEEEEe
Q 011570 199 RIKGVLIT 206 (483)
Q Consensus 199 ~~~~i~l~ 206 (483)
++.+||.+
T Consensus 86 ~id~li~~ 93 (265)
T 2o23_A 86 RVDVAVNC 93 (265)
T ss_dssp CCCEEEEC
T ss_pred CCCEEEEC
Confidence 56655433
No 246
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=73.15 E-value=25 Score=31.70 Aligned_cols=103 Identities=14% Similarity=0.122 Sum_probs=58.0
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
+...++||.|+...=..+...|.+.|..|++..-.-.......... |.++..+..|- -|.+.+++.++...+.-
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-GPRVHALRSDI-----ADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCcceEEEccC-----CCHHHHHHHHHHHHHHh
Confidence 3345677766554444555677888988887765444344444443 66666666553 25677777666554433
Q ss_pred CceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 198 IRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 198 ~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
.++.. +++|.. .+.+. -.+.+++++..+.
T Consensus 81 g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (255)
T 4eso_A 81 GAIDL-LHINAGVSELEPFDQVSEASYDRQFAV 112 (255)
T ss_dssp SSEEE-EEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCCCE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 45664 444442 22222 2366667666653
No 247
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=72.50 E-value=31 Score=31.42 Aligned_cols=102 Identities=16% Similarity=0.082 Sum_probs=58.0
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.++.. .+-.
T Consensus 30 ~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~-~~~~ 102 (281)
T 3ppi_A 30 GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-GNRAEFVSTNV-----TSEDSVLAAIEAA-NQLG 102 (281)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCT-----TCHHHHHHHHHHH-TTSS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-CCceEEEEcCC-----CCHHHHHHHHHHH-HHhC
Confidence 345666665554334455677788988887765443344444444 66666666553 3677788777665 3333
Q ss_pred ceeEEEEeCC-CCCCc-------CCCCHHHHHHHHHH
Q 011570 199 RIKGVLITNP-SNPLG-------TFLDRETLKDIVSF 227 (483)
Q Consensus 199 ~~~~i~l~~P-~NPtG-------~~~~~~~l~~i~~~ 227 (483)
+...++.++. ..+.+ ...+.+++++..+.
T Consensus 103 ~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (281)
T 3ppi_A 103 RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDL 139 (281)
T ss_dssp EEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHH
T ss_pred CCCeEEEccCcccccccccccccccCCHHHHHHHHHH
Confidence 5665555523 22222 24566666666653
No 248
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=72.50 E-value=24 Score=31.67 Aligned_cols=102 Identities=16% Similarity=0.125 Sum_probs=50.8
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..++-.
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 80 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-GAAVRFRNADV-----TNEADATAALAFAKQEFG 80 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-------------CEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-CCceEEEEccC-----CCHHHHHHHHHHHHHHcC
Confidence 345666666554334455667788988877655444333444433 55555555543 256777777765544434
Q ss_pred ceeEEEEeCCC-CCCcC------CCCHHHHHHHHHH
Q 011570 199 RIKGVLITNPS-NPLGT------FLDRETLKDIVSF 227 (483)
Q Consensus 199 ~~~~i~l~~P~-NPtG~------~~~~~~l~~i~~~ 227 (483)
++..+| +|.. .+.+. -.+.+++++..+.
T Consensus 81 ~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 115 (257)
T 3tpc_A 81 HVHGLV-NCAGTAPGEKILGRSGPHALDSFARTVAV 115 (257)
T ss_dssp CCCEEE-ECCCCCCCCCSEETTEECCHHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCccccccccCCHHHHHHHHHH
Confidence 566444 4442 22222 2456777766653
No 249
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=72.41 E-value=12 Score=37.90 Aligned_cols=112 Identities=11% Similarity=0.193 Sum_probs=64.9
Q ss_pred CCcCCCcEEEeCChhHHHHHHHHHh---cCC---------CC-----eEEEeCCCCcC-------------------hHH
Q 011570 115 ITFDPDRIVMSGGATGAHETVAFCL---ADP---------GD-----AFLVPTPYYPG-------------------FDR 158 (483)
Q Consensus 115 ~~~~~~~i~it~G~~~al~~~~~~l---~~~---------gd-----~Vlv~~P~y~~-------------------~~~ 158 (483)
+.++++.|.|+.++..++...+++| +.. |. ..+...|.|.- +.+
T Consensus 102 L~v~~~~i~I~a~~~~G~~~g~qTL~Ql~~~~~~~~~~~~~~~~lp~~~I~D~Prf~~RG~mLD~aR~f~~~~~ik~~id 181 (512)
T 1jak_A 102 LDSGPAGVTITARKAAGLFHGVQTLRQLLPPAVEKDSAQPGPWLVAGGTIEDTPRYAWRSAMLDVSRHFFGVDEVKRYID 181 (512)
T ss_dssp EEEETTEEEEEESSHHHHHHHHHHHHHHSCGGGGCSSCCCCCCEECCEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHH
T ss_pred EEEeCCEEEEEEcCHHHHHHHHHHHHHHhhhhhcccccccCcccccceEEeecCCCCccceeeccCCCCCCHHHHHHHHH
Confidence 4466778999888777666666554 211 11 23455566521 112
Q ss_pred HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEE
Q 011570 159 DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVC 237 (483)
Q Consensus 159 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~ 237 (483)
.+.. .+.++..+.+.++.+|.+.++.+-+.-.. |... ......|..++.+++++|++.|+++|+-||-
T Consensus 182 ~ma~-~KlN~lh~HltDdq~wriei~~~P~Lt~~----ga~~------~~~~~~~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 182 RVAR-YKYNKLHLHLSDDQGWRIAIDSWPRLATY----GGST------EVGGGPGGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp HHHT-TTCCEEEEECBCSSCBCBCCTTSTHHHHT----TTSC------CTTSSCCCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHH-cCCcEEEEEeccCCCceehhhhhHHHHhh----cCcc------ccCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 2223 26666666666555666655444332211 1110 1112336789999999999999999998774
No 250
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=71.89 E-value=31 Score=31.20 Aligned_cols=100 Identities=13% Similarity=0.115 Sum_probs=53.2
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
+...++||.|+...=..+...|.+.|..|++..-.-......+... ++..+..++. |.+.+++.++...+..
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~Dv~-------~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-GAVALYGDFS-------CETGIMAFIDLLKTQT 97 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-TCEEEECCTT-------SHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-CCeEEECCCC-------CHHHHHHHHHHHHHhc
Confidence 3445666655544333455667778877776654433334444444 6655544432 5677777776655544
Q ss_pred CceeEEEEeCCC-C-CCcCCCCHHHHHHHHH
Q 011570 198 IRIKGVLITNPS-N-PLGTFLDRETLKDIVS 226 (483)
Q Consensus 198 ~~~~~i~l~~P~-N-PtG~~~~~~~l~~i~~ 226 (483)
.++..+| +|.. . +...-.+.++++++.+
T Consensus 98 g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~ 127 (260)
T 3gem_A 98 SSLRAVV-HNASEWLAETPGEEADNFTRMFS 127 (260)
T ss_dssp SCCSEEE-ECCCCCCCCCTTCHHHHHHHHHH
T ss_pred CCCCEEE-ECCCccCCCCCCCCHHHHHHHHH
Confidence 4667544 4442 1 2223345555555554
No 251
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=71.38 E-value=25 Score=31.24 Aligned_cols=101 Identities=17% Similarity=0.264 Sum_probs=54.0
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
.++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..+...++
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~i 78 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-GNAVIGIVADL-----AHHEDVDVAFAAAVEWGGLP 78 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEECCT-----TSHHHHHHHHHHHHHHHCSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-cCCceEEECCC-----CCHHHHHHHHHHHHHhcCCC
Confidence 4666655543333444667788988887765444333333333 44455565543 25677777776554443456
Q ss_pred eEEEEeCCCCCCcC--CCCHHHHHHHHHH
Q 011570 201 KGVLITNPSNPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 201 ~~i~l~~P~NPtG~--~~~~~~l~~i~~~ 227 (483)
..++.+--..+.+. -.+.++++++.+.
T Consensus 79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 107 (235)
T 3l6e_A 79 ELVLHCAGTGEFGPVGVYTAEQIRRVMES 107 (235)
T ss_dssp SEEEEECCCC------CCCHHHHHHHHHH
T ss_pred cEEEECCCCCCCCChHhCCHHHHHHHHHH
Confidence 65554422222222 2466777776664
No 252
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=70.57 E-value=23 Score=32.21 Aligned_cols=101 Identities=13% Similarity=0.158 Sum_probs=54.8
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......... |.++..+..|- -|.+.+++.+++..++..
T Consensus 27 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 100 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-GKDVFVFSANL-----SDRKSIKQLAEVAEREME 100 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CSSEEEEECCT-----TSHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEeec-----CCHHHHHHHHHHHHHHcC
Confidence 345666555543334455667788988877665444344444444 77777776653 267777777765544434
Q ss_pred ceeEEEEeCCC-CCCcC--CCCHHHHHHHHH
Q 011570 199 RIKGVLITNPS-NPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 199 ~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~ 226 (483)
++..+| +|.. .+.+. -.+.++++++.+
T Consensus 101 ~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3grp_A 101 GIDILV-NNAGITRDGLFVRMQDQDWDDVLA 130 (266)
T ss_dssp SCCEEE-ECCCCC-----CCCHHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 566544 4442 22222 234555555554
No 253
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=70.01 E-value=23 Score=32.48 Aligned_cols=100 Identities=15% Similarity=0.100 Sum_probs=55.7
Q ss_pred CcEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 120 DRIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 120 ~~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
..++||.| +.+|- .+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..++-.
T Consensus 30 k~vlVTGa-s~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 102 (277)
T 3gvc_A 30 KVAIVTGA-GAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-GCGAAACRVDV-----SDEQQIIAMVDACVAAFG 102 (277)
T ss_dssp CEEEETTT-TSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-CSSCEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCcceEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 34555544 44444 444667788988887765444344444444 65666666543 256777777765544434
Q ss_pred ceeEEEEeCC-CCCCcC--CCCHHHHHHHHHH
Q 011570 199 RIKGVLITNP-SNPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 199 ~~~~i~l~~P-~NPtG~--~~~~~~l~~i~~~ 227 (483)
++..+| +|. ..+.+. -.+.++++++.+.
T Consensus 103 ~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~v 133 (277)
T 3gvc_A 103 GVDKLV-ANAGVVHLASLIDTTVEDFDRVIAI 133 (277)
T ss_dssp SCCEEE-ECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 667544 444 222222 3467777776664
No 254
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=69.89 E-value=36 Score=30.44 Aligned_cols=103 Identities=18% Similarity=0.212 Sum_probs=58.1
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
+...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..+..
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 81 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-GDAALAVAADI-----SKEADVDAAVEAALSKF 81 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCT-----TSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCceEEEEecC-----CCHHHHHHHHHHHHHhc
Confidence 3445666666554334455667788888887765544444444444 66666666553 25677777776554443
Q ss_pred CceeEEEEeCCC--CCCcC--CCCHHHHHHHHHH
Q 011570 198 IRIKGVLITNPS--NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 198 ~~~~~i~l~~P~--NPtG~--~~~~~~l~~i~~~ 227 (483)
.++..++ +|.. .+.+. ..+.+++++..+.
T Consensus 82 g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~~ 114 (261)
T 3n74_A 82 GKVDILV-NNAGIGHKPQNAELVEPEEFDRIVGV 114 (261)
T ss_dssp SCCCEEE-ECCCCCCCSCCGGGSCHHHHHHHHHH
T ss_pred CCCCEEE-ECCccCCCCCCcccCCHHHHHHHHHH
Confidence 4566544 4432 21222 2466777766654
No 255
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=69.11 E-value=63 Score=28.81 Aligned_cols=101 Identities=12% Similarity=0.047 Sum_probs=58.6
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
...++||.|+...=..+...|.+.|..|++..-.-...... ++.. |.++..+..|- -|.+.+++.++...+
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA-GGRIVARSLDA-----RNEDEVTAFLNAADA 80 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECcC-----CCHHHHHHHHHHHHh
Confidence 34566666655433445566778898887765544333332 3333 67777777653 267778877776655
Q ss_pred cCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 196 ~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
. .++..+ ++|.. .+.+. -.+.+++++..+.
T Consensus 81 ~-g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (252)
T 3h7a_A 81 H-APLEVT-IFNVGANVNFPILETTDRVFRKVWEM 113 (252)
T ss_dssp H-SCEEEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred h-CCceEE-EECCCcCCCCCcccCCHHHHHHHHHH
Confidence 5 467654 44442 22222 2566667666654
No 256
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=69.09 E-value=51 Score=29.29 Aligned_cols=101 Identities=23% Similarity=0.247 Sum_probs=53.8
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCC-cChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYY-PGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y-~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
..++||.|+...=..+...|.+.|..|++..-.- ......+... |.++..+..|- -|.+.+++++++..++-.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 81 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL-GRRVLTVKCDV-----SQPGDVEAFGKQVISTFG 81 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhc-CCcEEEEEeec-----CCHHHHHHHHHHHHHHcC
Confidence 4566665555433445566778888777654332 2222233333 66666666553 256777777665443323
Q ss_pred ceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 199 RIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 199 ~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
++..+| +|.. .+.+. -.+.++++++.+.
T Consensus 82 ~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (249)
T 2ew8_A 82 RCDILV-NNAGIYPLIPFDELTFEQWKKTFEI 112 (249)
T ss_dssp CCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 566544 4442 22221 2466666666653
No 257
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=68.76 E-value=23 Score=32.26 Aligned_cols=100 Identities=13% Similarity=0.171 Sum_probs=55.5
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
.++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+.+..++..++
T Consensus 7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~~~~~~~~~~~~~g~i 80 (281)
T 3m1a_A 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-PDRAEAISLDV-----TDGERIDVVAADVLARYGRV 80 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-TTTEEEEECCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCCceEEEeeC-----CCHHHHHHHHHHHHHhCCCC
Confidence 4555555443333445667788988887765555555544443 55555555543 25677777776554443456
Q ss_pred eEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 201 KGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 201 ~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
..++ +|.. .+.+. -.+.++++++.+.
T Consensus 81 d~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~ 109 (281)
T 3m1a_A 81 DVLV-NNAGRTQVGAFEETTERELRDLFEL 109 (281)
T ss_dssp SEEE-ECCCCEEECCTTTCCHHHHHHHHHH
T ss_pred CEEE-ECCCcCCCCChhhCCHHHHHHHHHH
Confidence 6544 4442 22222 3466667666653
No 258
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=67.46 E-value=51 Score=29.80 Aligned_cols=102 Identities=15% Similarity=0.101 Sum_probs=57.8
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|.+|++..-.-.......... |.++..+..|- -|.+.+++.+++..++-.
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 84 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-GRGAVHHVVDL-----TNEVSVRALIDFTIDTFG 84 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-CTTCEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCCeEEEECCC-----CCHHHHHHHHHHHHHHcC
Confidence 345666655544334455677788988887766555555555554 65555555543 256777777765544333
Q ss_pred ceeEEEEeCCC-C-C-CcC--CCCHHHHHHHHHH
Q 011570 199 RIKGVLITNPS-N-P-LGT--FLDRETLKDIVSF 227 (483)
Q Consensus 199 ~~~~i~l~~P~-N-P-tG~--~~~~~~l~~i~~~ 227 (483)
++..+ ++|.. . + .+. -++.+++++..+.
T Consensus 85 ~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~~v 117 (271)
T 3tzq_B 85 RLDIV-DNNAAHSDPADMLVTQMTVDVWDDTFTV 117 (271)
T ss_dssp CCCEE-EECCCCCCTTCCCGGGCCHHHHHHHHHH
T ss_pred CCCEE-EECCCCCCCCCCccccCCHHHHHHHHHH
Confidence 56644 44442 2 2 111 3466777766653
No 259
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=67.39 E-value=25 Score=32.07 Aligned_cols=102 Identities=19% Similarity=0.247 Sum_probs=55.5
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCC------------cCh---HHHHhhhcCcEEEEeecCCCCCcccCH
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYY------------PGF---DRDLRWRTGVQLVPVVCDSSNDFKVTM 183 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y------------~~~---~~~~~~~~G~~~~~v~~~~~~~~~~d~ 183 (483)
...++||.|+...=..+...|.+.|..|++..-.. ... ...+... |.++..+..|- -|.
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~ 83 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-GRKAYTAEVDV-----RDR 83 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-TSCEEEEECCT-----TCH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc-CCceEEEEccC-----CCH
Confidence 34566666655433445567778898887754321 001 1112233 66777777653 257
Q ss_pred HHHHHHHHHHHhcCCceeEEEEeCC-CCCCcCCCCHHHHHHHHHH
Q 011570 184 EALEAAYEKAQESNIRIKGVLITNP-SNPLGTFLDRETLKDIVSF 227 (483)
Q Consensus 184 ~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~~~~~~~l~~i~~~ 227 (483)
+.+++.+++..++..++..+| +|. ..+.+...+.+++++..+.
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~ 127 (287)
T 3pxx_A 84 AAVSRELANAVAEFGKLDVVV-ANAGICPLGAHLPVQAFADAFDV 127 (287)
T ss_dssp HHHHHHHHHHHHHHSCCCEEE-ECCCCCCCCTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEE-ECCCcCcccCcCCHHHHHHHhhh
Confidence 777777765544434566544 444 3333334666777666653
No 260
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=66.91 E-value=32 Score=31.11 Aligned_cols=100 Identities=20% Similarity=0.157 Sum_probs=58.2
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
.|+||.|++..=..+...|.+.|-.|++.+-.-.......+ . +.++..+..|- -|.+++++.+++..++-.++
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~-~-~~~~~~~~~Dv-----~~~~~v~~~v~~~~~~~g~i 76 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK-E-RPNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT-T-CTTEEEEECCT-----TSHHHHHHHHHHHHHHHSCC
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-h-cCCEEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 46666665544345557788899888877654333333232 2 55666666553 25777777776655543467
Q ss_pred eEEEEeCC-CCCCcC--CCCHHHHHHHHHHH
Q 011570 201 KGVLITNP-SNPLGT--FLDRETLKDIVSFI 228 (483)
Q Consensus 201 ~~i~l~~P-~NPtG~--~~~~~~l~~i~~~a 228 (483)
.. +++|. .++.+. -++.++++++.+.-
T Consensus 77 Di-LVNNAG~~~~~~~~~~~~e~~~~~~~vN 106 (247)
T 3ged_A 77 DV-LVNNACRGSKGILSSLLYEEFDYILSVG 106 (247)
T ss_dssp CE-EEECCCCCCCCGGGTCCHHHHHHHHHHH
T ss_pred CE-EEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence 74 45555 233333 35778888877753
No 261
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=65.08 E-value=35 Score=30.48 Aligned_cols=102 Identities=15% Similarity=0.150 Sum_probs=54.1
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......... +.+...+..|- -|.+.+++.+++..++-.
T Consensus 9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL-GDNGKGMALNV-----TNPESIEAVLKAITDEFG 82 (248)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-GGGEEEEECCT-----TCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cccceEEEEeC-----CCHHHHHHHHHHHHHHcC
Confidence 344566555543333445667788988887654433333333333 44444555442 257777777766544434
Q ss_pred ceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 199 RIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 199 ~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
++..+ ++|.. .+.+. -.+.+++++..+.
T Consensus 83 ~iD~l-v~nAg~~~~~~~~~~~~~~~~~~~~v 113 (248)
T 3op4_A 83 GVDIL-VNNAGITRDNLLMRMKEEEWSDIMET 113 (248)
T ss_dssp CCSEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 56644 44442 22222 2466777766653
No 262
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=64.61 E-value=17 Score=36.86 Aligned_cols=107 Identities=6% Similarity=0.065 Sum_probs=63.0
Q ss_pred CCcCCCcEEEeCChhHHHHHHHHHhc---CC---CCe-----EEEeCCCCcC-------------------hHHHHhhhc
Q 011570 115 ITFDPDRIVMSGGATGAHETVAFCLA---DP---GDA-----FLVPTPYYPG-------------------FDRDLRWRT 164 (483)
Q Consensus 115 ~~~~~~~i~it~G~~~al~~~~~~l~---~~---gd~-----Vlv~~P~y~~-------------------~~~~~~~~~ 164 (483)
+.++++.|.|+..+..++...+++|. .. |.. .+...|.|.- +.+.+...
T Consensus 102 L~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~ma~~- 180 (507)
T 1now_A 102 LLVKEPVAVLKANRVWGALRGLETFSQLVYQDSYGTFTINESTIIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMAFN- 180 (507)
T ss_dssp EEECSSEEEEEESSHHHHHHHHHHHHHHCEECTTSCEEEEEEEEEECCSCSEEEEEEESSSSCCCHHHHHHHHHHHHHT-
T ss_pred EEEcCCeEEEEECCHHHHHHHHHHHHHHHhhccCceEEeccEEEEecCccceeeeeeccCCCCCCHHHHHHHHHHHHHh-
Confidence 45678889999888777776666552 11 111 2444565521 11223332
Q ss_pred CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEE
Q 011570 165 GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVC 237 (483)
Q Consensus 165 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~ 237 (483)
+.++..+.+.++.+|.+....+.+.-.. |. ..| |..++.+++++|++.|+++|+-||-
T Consensus 181 KlN~lh~HltDdq~wr~e~~~~P~Lt~~----Ga----------~~~-~~~YT~~di~eiv~yA~~rgI~VIP 238 (507)
T 1now_A 181 KFNVLHWHIVDDQSFPYQSITFPELSNK----GS----------YSL-SHVYTPNDVRMVIEYARLRGIRVLP 238 (507)
T ss_dssp TCCEEEEECCCSSCCCBCCSSCHHHHHH----HS----------SST-TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEEeeccCccceeeccchhhhhcc----cC----------cCC-CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 6666666665555566544333322111 00 012 6779999999999999999988774
No 263
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=64.31 E-value=85 Score=28.55 Aligned_cols=103 Identities=20% Similarity=0.202 Sum_probs=58.5
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCc-------C---hHHHHhhhcCcEEEEeecCCCCCcccCHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYP-------G---FDRDLRWRTGVQLVPVVCDSSNDFKVTMEALE 187 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~-------~---~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~ 187 (483)
+...++||.|+...=..+...|.+.|..|++..-.-. . ....+... |.++..+..|- -|.+.++
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~ 81 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA-GGQALPIVGDI-----RDGDAVA 81 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH-TSEEEEEECCT-----TSHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHH
Confidence 3445666666554334455677888988876643322 1 12233444 77887777653 2677777
Q ss_pred HHHHHHHhcCCceeEEEEeCC-CCCCcC--CCCHHHHHHHHHH
Q 011570 188 AAYEKAQESNIRIKGVLITNP-SNPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 188 ~~i~~~~~~~~~~~~i~l~~P-~NPtG~--~~~~~~l~~i~~~ 227 (483)
+.+++..++..++..+| +|. ..+.+. -.+.++++++.+.
T Consensus 82 ~~~~~~~~~~g~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~v 123 (285)
T 3sc4_A 82 AAVAKTVEQFGGIDICV-NNASAINLGSIEEVPLKRFDLMNGI 123 (285)
T ss_dssp HHHHHHHHHHSCCSEEE-ECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 77766544434666544 444 222232 3467777776654
No 264
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=64.27 E-value=98 Score=29.26 Aligned_cols=101 Identities=18% Similarity=0.201 Sum_probs=55.7
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCc----------ChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHH
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYP----------GFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEA 188 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~----------~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 188 (483)
...++||.|+...=..+...|.+.|..|++..-.-. .....+... |.++..+..|- -|.+.+++
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~-g~~~~~~~~Dv-----~d~~~v~~ 118 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV-GGKALPCIVDV-----RDEQQISA 118 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc-CCeEEEEEccC-----CCHHHHHH
Confidence 334666655543334455677888987776543322 122333443 77888777653 26777887
Q ss_pred HHHHHHhcCCceeEEEEeCCC-CCCc--CCCCHHHHHHHHH
Q 011570 189 AYEKAQESNIRIKGVLITNPS-NPLG--TFLDRETLKDIVS 226 (483)
Q Consensus 189 ~i~~~~~~~~~~~~i~l~~P~-NPtG--~~~~~~~l~~i~~ 226 (483)
++++..++-.++..+| +|.. ...+ .-.+.++++++.+
T Consensus 119 ~~~~~~~~~g~iDilV-nnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 119 AVEKAIKKFGGIDILV-NNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHHHSCCCEEE-ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 7776554434666544 4442 2222 2346666666554
No 265
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=64.04 E-value=69 Score=29.03 Aligned_cols=102 Identities=22% Similarity=0.221 Sum_probs=56.3
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh---cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR---TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~---~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
..++||.|+...=..+...|.+.|..|++..-.-.......... .|.++..+..|- -|.+.+++++++..++
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDV-----RAPPAVMAAVDQALKE 102 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 45666665554334455677888988877654433222222211 266777777653 2567777777665444
Q ss_pred CCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 197 NIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 197 ~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
-.++..+ ++|.. .+.+. -++.++++++.+.
T Consensus 103 ~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 135 (277)
T 4fc7_A 103 FGRIDIL-INCAAGNFLCPAGALSFNAFKTVMDI 135 (277)
T ss_dssp HSCCCEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEE-EECCcCCCCCCcccCCHHHHHHHHHH
Confidence 3466654 44442 22221 2466777776654
No 266
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=63.96 E-value=67 Score=28.32 Aligned_cols=102 Identities=12% Similarity=0.214 Sum_probs=56.4
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
..++||.|+...=..+...|.+.|..|++....-..... .++.. |.++..+..|- -|.+.+++.+++..++
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 79 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK-GFKARGLVLNI-----SDIESIQNFFAEIKAE 79 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 456666555443334556677889888776554332222 22332 66676666653 3677888877766555
Q ss_pred CCceeEEEEeCCCCCCcC--CCCHHHHHHHHHH
Q 011570 197 NIRIKGVLITNPSNPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 197 ~~~~~~i~l~~P~NPtG~--~~~~~~l~~i~~~ 227 (483)
..++..++.+--..+.+. -.+.+++++..+.
T Consensus 80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (247)
T 3lyl_A 80 NLAIDILVNNAGITRDNLMMRMSEDEWQSVINT 112 (247)
T ss_dssp TCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 556775554422222222 2466666666653
No 267
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=63.77 E-value=74 Score=29.24 Aligned_cols=101 Identities=16% Similarity=0.137 Sum_probs=55.9
Q ss_pred CcEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHHHHhhh--cC-cEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 120 DRIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDRDLRWR--TG-VQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 120 ~~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~G-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
..++||.| +.+|- .+...|.+.|..|++..-.-.......... .+ .++..+..|- -|.+.+++++++..+
T Consensus 42 k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 115 (293)
T 3rih_A 42 RSVLVTGG-TKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDV-----SDPGSCADAARTVVD 115 (293)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeC-----CCHHHHHHHHHHHHH
Confidence 34555555 44444 445667788988887765544443333322 13 4666666553 257777777766544
Q ss_pred cCCceeEEEEeCC-CCCCcC--CCCHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNP-SNPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 196 ~~~~~~~i~l~~P-~NPtG~--~~~~~~l~~i~~~ 227 (483)
+-.++..+| +|. ..+.+. -++.++++++.+.
T Consensus 116 ~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~v 149 (293)
T 3rih_A 116 AFGALDVVC-ANAGIFPEARLDTMTPEQLSEVLDV 149 (293)
T ss_dssp HHSCCCEEE-ECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 434566544 444 233332 3477777777764
No 268
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=62.66 E-value=58 Score=28.99 Aligned_cols=101 Identities=14% Similarity=0.049 Sum_probs=52.7
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
..++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.++...++-.+
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~ 80 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-GERSMFVRHDV-----SSEADWTLVMAAVQRRLGT 80 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-CTTEEEECCCT-----TCHHHHHHHHHHHHHHHCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCceEEEEccC-----CCHHHHHHHHHHHHHHcCC
Confidence 34555544443333444667778888877654433233333333 55565565543 2567777777654433335
Q ss_pred eeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 200 IKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 200 ~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
+..+| +|.. .+.+. -.+.+++++..+.
T Consensus 81 id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (253)
T 1hxh_A 81 LNVLV-NNAGILLPGDMETGRLEDFSRLLKI 110 (253)
T ss_dssp CCEEE-ECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCCcccCCHHHHHHHHHh
Confidence 66544 4442 22222 2466666666553
No 269
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=62.59 E-value=71 Score=29.36 Aligned_cols=103 Identities=20% Similarity=0.305 Sum_probs=56.2
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCC------------CcChH---HHHhhhcCcEEEEeecCCCCCcccC
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPY------------YPGFD---RDLRWRTGVQLVPVVCDSSNDFKVT 182 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~------------y~~~~---~~~~~~~G~~~~~v~~~~~~~~~~d 182 (483)
+...++||.|+...=..+...|.+.|..|++.+-. -.... ..+... |.++..+..|- -|
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~ 100 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL-GRRIIASQVDV-----RD 100 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEEEECCT-----TC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc-CCceEEEECCC-----CC
Confidence 33456666655543344556677889888765432 01111 122333 67777777653 36
Q ss_pred HHHHHHHHHHHHhcCCceeEEEEeCCC-CCCcC---CCCHHHHHHHHHH
Q 011570 183 MEALEAAYEKAQESNIRIKGVLITNPS-NPLGT---FLDRETLKDIVSF 227 (483)
Q Consensus 183 ~~~l~~~i~~~~~~~~~~~~i~l~~P~-NPtG~---~~~~~~l~~i~~~ 227 (483)
.+.+++++++..+.-.++..+ ++|.. .+.+. -++.+++++..+.
T Consensus 101 ~~~v~~~~~~~~~~~g~iD~l-v~nAg~~~~~~~~~~~~~~~~~~~~~v 148 (299)
T 3t7c_A 101 FDAMQAAVDDGVTQLGRLDIV-LANAALASEGTRLNRMDPKTWRDMIDV 148 (299)
T ss_dssp HHHHHHHHHHHHHHHSCCCEE-EECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEE-EECCCCCCCCCchhhCCHHHHHHHHHH
Confidence 777777776654443456654 44442 22222 3477777777664
No 270
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=61.99 E-value=61 Score=28.74 Aligned_cols=99 Identities=13% Similarity=0.117 Sum_probs=50.7
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
..++||.|+...=..+...|.+.|..|++..-.-.......... |...+..++ -|.+.++++++...++-.+
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~-------~~~~~~~~~~~~~~~~~g~ 77 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-GAHPVVMDV-------ADPASVERGFAEALAHLGR 77 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-TCEEEECCT-------TCHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCEEEEecC-------CCHHHHHHHHHHHHHHcCC
Confidence 35666655544334445667788888877643322222333333 544444332 2567777766654433335
Q ss_pred eeEEEEeCCC-CCCc--CCCCHHHHHHHHHH
Q 011570 200 IKGVLITNPS-NPLG--TFLDRETLKDIVSF 227 (483)
Q Consensus 200 ~~~i~l~~P~-NPtG--~~~~~~~l~~i~~~ 227 (483)
+..+| +|.. .+.+ .-.+.++++++.+.
T Consensus 78 id~lv-n~Ag~~~~~~~~~~~~~~~~~~~~~ 107 (245)
T 1uls_A 78 LDGVV-HYAGITRDNFHWKMPLEDWELVLRV 107 (245)
T ss_dssp CCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 66554 4442 2222 12466667666653
No 271
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=61.81 E-value=72 Score=28.56 Aligned_cols=101 Identities=12% Similarity=0.082 Sum_probs=54.8
Q ss_pred CcEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 120 DRIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 120 ~~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
..++||.|+ .+|- .+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.+....+
T Consensus 30 k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~ 102 (262)
T 3rkr_A 30 QVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA-GGEAESHACDL-----SHSDAIAAFATGVLA 102 (262)
T ss_dssp CEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-CCceeEEEecC-----CCHHHHHHHHHHHHH
Confidence 345555554 4444 44466778888887765544332222 2222 66777776653 256777777766544
Q ss_pred cCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 196 ~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
...++..+|.+--. .+.+. -.+.++++++.+.
T Consensus 103 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~v 137 (262)
T 3rkr_A 103 AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAV 137 (262)
T ss_dssp HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHH
T ss_pred hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHH
Confidence 43467755544222 23232 2466667666553
No 272
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=61.65 E-value=92 Score=28.12 Aligned_cols=100 Identities=15% Similarity=0.149 Sum_probs=55.9
Q ss_pred cEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcC--hHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 121 RIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPG--FDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 121 ~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~--~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
.+++.+|++.+|- .+...|.+.|-.|++..-.-.. ....+... |.++..++.|- -|.+++++.+++..++-
T Consensus 8 KvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 8 KVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQR-QPRATYLPVEL-----QDDAQCRDAVAQTIATF 81 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHH-CTTCEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhc-CCCEEEEEeec-----CCHHHHHHHHHHHHHHh
Confidence 3444445555564 4446677888776665433222 22233343 66666776653 25677777776654443
Q ss_pred CceeEEEEeCC--CCCCcCCCCHHHHHHHHHH
Q 011570 198 IRIKGVLITNP--SNPLGTFLDRETLKDIVSF 227 (483)
Q Consensus 198 ~~~~~i~l~~P--~NPtG~~~~~~~l~~i~~~ 227 (483)
.+.. ++++|. +.+...-.+.++++++.+.
T Consensus 82 G~iD-iLVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 82 GRLD-GLVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp SCCC-EEEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred CCCC-EEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 4666 455665 2333445677777777664
No 273
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=61.31 E-value=67 Score=29.07 Aligned_cols=103 Identities=16% Similarity=0.197 Sum_probs=57.3
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
+...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.+++..
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV-GHDAEAVAFDV-----TSESEIIEAFARLD 98 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-TCCEEECCCCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 334455555544333445566778898888776543322222 2222 66777766553 36777888777665
Q ss_pred hcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 195 ESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
++..++..+| +|.. .+.+. -.+.+++++..+.
T Consensus 99 ~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~v 133 (271)
T 4ibo_A 99 EQGIDVDILV-NNAGIQFRKPMIELETADWQRVIDT 133 (271)
T ss_dssp HHTCCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHCCCCCEEE-ECCCCCCCCCchhCCHHHHHHHHHH
Confidence 5545677544 4442 22222 2466777776654
No 274
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=60.70 E-value=83 Score=28.50 Aligned_cols=103 Identities=17% Similarity=0.234 Sum_probs=56.7
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
+...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.+++..
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV-GGKALPIRCDV-----TQPDQVRGMLDQMT 104 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-TCCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 444566666655433445566778898887765543333332 2222 55666666553 25777777776654
Q ss_pred hcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 195 ESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
++-.++..+| +|.. .+.+. -.+.++++++.+.
T Consensus 105 ~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~~ 139 (276)
T 3r1i_A 105 GELGGIDIAV-CNAGIVSVQAMLDMPLEEFQRIQDT 139 (276)
T ss_dssp HHHSCCSEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4433566544 4442 22222 3467777776664
No 275
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=60.50 E-value=77 Score=28.58 Aligned_cols=99 Identities=20% Similarity=0.283 Sum_probs=53.2
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCC-------C-----cChH---HHHhhhcCcEEEEeecCCCCCcccCH
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPY-------Y-----PGFD---RDLRWRTGVQLVPVVCDSSNDFKVTM 183 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~-------y-----~~~~---~~~~~~~G~~~~~v~~~~~~~~~~d~ 183 (483)
...++||.|+...=..+...|.+.|..|++..-. | .... ..+... |.++..+..|- -|.
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~ 86 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-GSRIVARQADV-----RDR 86 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH-TCCEEEEECCT-----TCH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc-CCeEEEEeCCC-----CCH
Confidence 3456666665543344556777889888765432 1 1111 112233 66777777653 267
Q ss_pred HHHHHHHHHHHhcCCceeEEEEeCCC-CCCcCCCCHHHHHHHHH
Q 011570 184 EALEAAYEKAQESNIRIKGVLITNPS-NPLGTFLDRETLKDIVS 226 (483)
Q Consensus 184 ~~l~~~i~~~~~~~~~~~~i~l~~P~-NPtG~~~~~~~l~~i~~ 226 (483)
+.+++.+++..++-.++..+| +|.. .+.+. +.++++++.+
T Consensus 87 ~~v~~~~~~~~~~~g~id~lv-~nAg~~~~~~--~~~~~~~~~~ 127 (278)
T 3sx2_A 87 ESLSAALQAGLDELGRLDIVV-ANAGIAPMSA--GDDGWHDVID 127 (278)
T ss_dssp HHHHHHHHHHHHHHCCCCEEE-ECCCCCCCSS--THHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEE-ECCCCCCCCC--CHHHHHHHHH
Confidence 777777766544434566544 4442 22222 4566666555
No 276
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=60.47 E-value=50 Score=30.00 Aligned_cols=100 Identities=19% Similarity=0.178 Sum_probs=55.4
Q ss_pred cEEEeCChhHHHHH-HHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 121 RIVMSGGATGAHET-VAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 121 ~i~it~G~~~al~~-~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
.+++.+|++.+|-. +...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..++-.+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~ 102 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-GDDALCVPTDV-----TDPDSVRALFTATVEKFGR 102 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-TSCCEEEECCT-----TSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-CCCeEEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 44444555555544 44667788988877655443344444444 55555565543 2567777777655444345
Q ss_pred eeEEEEeCCC--CCCcC--CCCHHHHHHHHHH
Q 011570 200 IKGVLITNPS--NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 200 ~~~i~l~~P~--NPtG~--~~~~~~l~~i~~~ 227 (483)
+..+ ++|.. .+.+. -.+.++++++.+.
T Consensus 103 iD~l-VnnAg~~~~~~~~~~~~~~~~~~~~~v 133 (272)
T 4dyv_A 103 VDVL-FNNAGTGAPAIPMEDLTFAQWKQVVDT 133 (272)
T ss_dssp CCEE-EECCCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred CCEE-EECCCCCCCCCChhhCCHHHHHHHHHh
Confidence 6654 44442 22222 2467777776664
No 277
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=60.38 E-value=65 Score=29.28 Aligned_cols=101 Identities=23% Similarity=0.187 Sum_probs=54.8
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
..++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++++++..++
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA-GHDVDGSSCDV-----TSTDEVHAAVAAAVER 98 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 3466665555333345566778898887765443322222 2222 66676666653 2677777777665444
Q ss_pred CCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 197 NIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 197 ~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
-.++..+ ++|.. .+.+. -.+.++++++.+.
T Consensus 99 ~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~v 131 (279)
T 3sju_A 99 FGPIGIL-VNSAGRNGGGETADLDDALWADVLDT 131 (279)
T ss_dssp HCSCCEE-EECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred cCCCcEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 3356654 44442 22222 2466777766653
No 278
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=60.38 E-value=38 Score=29.75 Aligned_cols=101 Identities=20% Similarity=0.213 Sum_probs=54.6
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhh---hcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRW---RTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~---~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
.++||.|+...=..+...|.+.|..|++..-.-......... ..|.++..+..|- -|.+.+++++++..+..
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV-----SKAESVEEFSKKVLERF 78 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHCC-HHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEecc-----CCHHHHHHHHHHHHHhc
Confidence 466666655433445566778888887765543332222211 1266777776653 25677777665443333
Q ss_pred CceeEEEEeCC-CCCCcC--CCCHHHHHHHHHH
Q 011570 198 IRIKGVLITNP-SNPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 198 ~~~~~i~l~~P-~NPtG~--~~~~~~l~~i~~~ 227 (483)
.++..++ +|. ..+.+. -.+.+++++..+.
T Consensus 79 g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (235)
T 3l77_A 79 GDVDVVV-ANAGLGYFKRLEELSEEEFHEMIEV 110 (235)
T ss_dssp SSCSEEE-ECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred CCCCEEE-ECCccccccCcccCCHHHHHHHHHH
Confidence 3566544 444 233332 2366777776654
No 279
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=60.15 E-value=53 Score=29.21 Aligned_cols=99 Identities=20% Similarity=0.165 Sum_probs=51.1
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
.++||.|+...=..+...|.+.|..|++..-.-.......... .++..+..|- -|.+.+++.+++..++-.++
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~i 76 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER--PNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTC--TTEEEEECCT-----TSHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--ccCCeEEeeC-----CCHHHHHHHHHHHHHHcCCC
Confidence 4566655554334455667788988877654433233333222 2233444432 25677777776554443456
Q ss_pred eEEEEeCC-CCCCcC--CCCHHHHHHHHHH
Q 011570 201 KGVLITNP-SNPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 201 ~~i~l~~P-~NPtG~--~~~~~~l~~i~~~ 227 (483)
..++ +|. ..+.+. -.+.++++++.+.
T Consensus 77 d~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 105 (247)
T 3dii_A 77 DVLV-NNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp CEEE-ECCC-CCCCGGGTCCHHHHHHHHHH
T ss_pred CEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 6544 444 222222 3466777766654
No 280
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=59.86 E-value=68 Score=28.66 Aligned_cols=103 Identities=17% Similarity=0.217 Sum_probs=55.9
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
+...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.+++..
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA-GGKAIGLECNV-----TDEQHREAVIKAAL 84 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHHHH
Confidence 334556655554333344566778888887765443322222 2232 66777777653 35777777776554
Q ss_pred hcCCceeEEEEeCCC-C-CCcCCCCHHHHHHHHHH
Q 011570 195 ESNIRIKGVLITNPS-N-PLGTFLDRETLKDIVSF 227 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~-N-PtG~~~~~~~l~~i~~~ 227 (483)
++-.++..+ ++|.. . +...-.+.+++++..+.
T Consensus 85 ~~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~v 118 (256)
T 3gaf_A 85 DQFGKITVL-VNNAGGGGPKPFDMPMSDFEWAFKL 118 (256)
T ss_dssp HHHSCCCEE-EECCCCCCCCCTTCCHHHHHHHHHH
T ss_pred HHcCCCCEE-EECCCCCCCCCCCCCHHHHHHHHHH
Confidence 443456654 44442 2 22224577777766653
No 281
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=59.77 E-value=14 Score=39.88 Aligned_cols=115 Identities=10% Similarity=0.128 Sum_probs=64.9
Q ss_pred cCCCcEEEeCChhHHHHHHHHHh---cCCCC------eEEEeCCCCcC-------------------hHHHHhhhcCcEE
Q 011570 117 FDPDRIVMSGGATGAHETVAFCL---ADPGD------AFLVPTPYYPG-------------------FDRDLRWRTGVQL 168 (483)
Q Consensus 117 ~~~~~i~it~G~~~al~~~~~~l---~~~gd------~Vlv~~P~y~~-------------------~~~~~~~~~G~~~ 168 (483)
++++.|.|+..+..+++..+++| +..++ ..+...|.|.- +.+.+... +.++
T Consensus 266 v~~~~i~I~a~~~~G~fyglqTL~QLl~~~~~~~ip~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~Id~mA~~-KlN~ 344 (858)
T 1c7s_A 266 IGKKEAQVIGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMAAY-KLNK 344 (858)
T ss_dssp ECSSCEEEEESSHHHHHHHHHHHHHHSCTTSCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHT-TCCE
T ss_pred EeCCeEEEEEecccceeHHHHHHHHHhhhcCCccccceEEEeCCCcceeeeeecCCCCCCCHHHHHHHHHHHHHh-CCcE
Confidence 45667888877776666666554 23322 23455666631 22233333 6777
Q ss_pred EEeecCCCCCcccCHHHHHHHHHHHHhcCCceeE--EE---EeCC---CC--CCcCCCCHHHHHHHHHHHhhcCcEEEE
Q 011570 169 VPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKG--VL---ITNP---SN--PLGTFLDRETLKDIVSFINEKNIHLVC 237 (483)
Q Consensus 169 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~--i~---l~~P---~N--PtG~~~~~~~l~~i~~~a~~~~~~iI~ 237 (483)
..+.+.++.+|.+.+..+-+.-+. |. -+. .. -..| ++ |.|..++.+++++|++.|+++|+-||-
T Consensus 345 lh~HltDdqgwriei~~yP~Lt~~----Ga-~r~~~~~~~~~~~p~~g~~~~~~~g~YT~~direIv~YA~~rgI~VIP 418 (858)
T 1c7s_A 345 FHFHLSDDEGWRIEIPGLPELTEV----GG-QRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVIP 418 (858)
T ss_dssp EEEECEETTEECBCCTTCTHHHHT----TT-EECSCTTCSSSBCCCTTCCSSCEECCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred EEEEeccCccccccccCCchhhhc----cc-cccccccccccccccccCCCCccCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 777776656676665544332210 10 000 00 0001 11 456789999999999999999988774
No 282
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=59.06 E-value=79 Score=29.07 Aligned_cols=102 Identities=20% Similarity=0.297 Sum_probs=56.1
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.+++..+
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ-GFDAHGVVCDV-----RHLDEMVRLADEAFR 104 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCceEEEEccC-----CCHHHHHHHHHHHHH
Confidence 34566666555433345566778888887765543333322 2222 66666666653 256777777765544
Q ss_pred cCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 196 ~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
...++..+| +|.. .+.|. -.+.++++++.+.
T Consensus 105 ~~g~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~v 138 (301)
T 3tjr_A 105 LLGGVDVVF-SNAGIVVAGPLAQMNHDDWRWVIDI 138 (301)
T ss_dssp HHSSCSEEE-ECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred hCCCCCEEE-ECCCcCCCCCcccCCHHHHHHHHHh
Confidence 434566544 4442 22222 3466777666653
No 283
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=58.82 E-value=66 Score=28.68 Aligned_cols=101 Identities=16% Similarity=0.113 Sum_probs=51.9
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
..++||.|+...=..+...|.+.|..|++..-.-.......... |.++..+..|- -|.+.+++.+++..++-.+
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~ 79 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-GDAARYQHLDV-----TIEEDWQRVVAYAREEFGS 79 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-GGGEEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 45666655544334455667788888776643322222333332 54555555542 2567777776654433235
Q ss_pred eeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 200 IKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 200 ~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
+..+| +|.. .+.+. -.+.+++++..+.
T Consensus 80 iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 109 (254)
T 1hdc_A 80 VDGLV-NNAGISTGMFLETESVERFRKVVEI 109 (254)
T ss_dssp CCEEE-ECCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 66544 4442 22221 2455666666553
No 284
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=58.55 E-value=76 Score=28.30 Aligned_cols=101 Identities=15% Similarity=0.179 Sum_probs=54.3
Q ss_pred CcEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHHHHhhh--cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 120 DRIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDRDLRWR--TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 120 ~~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
..++||.| +.+|- .+...|.+.|..|++..-.-.......... .+.++..+..|- -|.+.+++.+++..++
T Consensus 7 k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 7 KVVIITGG-SSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDV-----RNTDDIQKMIEQIDEK 80 (257)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 34555544 44554 444667788988877654433322222221 255666666553 2567777777665444
Q ss_pred CCceeEEEEeCCC-CCCc--CCCCHHHHHHHHHH
Q 011570 197 NIRIKGVLITNPS-NPLG--TFLDRETLKDIVSF 227 (483)
Q Consensus 197 ~~~~~~i~l~~P~-NPtG--~~~~~~~l~~i~~~ 227 (483)
..++..+| +|.. .+.+ .-.+.+++++..+.
T Consensus 81 ~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (257)
T 3imf_A 81 FGRIDILI-NNAAGNFICPAEDLSVNGWNSVINI 113 (257)
T ss_dssp HSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 34566544 4442 2222 23566777776664
No 285
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=58.46 E-value=86 Score=28.06 Aligned_cols=103 Identities=15% Similarity=0.172 Sum_probs=57.6
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
+...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.+++..
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT-GRRALSVGTDI-----TDDAQVAHLVDETM 83 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 334566666655433445566778898888765543322222 2222 66777776653 25777777777655
Q ss_pred hcCCceeEEEEeCC-C-CCCcC--CCCHHHHHHHHHH
Q 011570 195 ESNIRIKGVLITNP-S-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 195 ~~~~~~~~i~l~~P-~-NPtG~--~~~~~~l~~i~~~ 227 (483)
++-.++..+| +|. . .+.+. -.+.+++++..+.
T Consensus 84 ~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~ 119 (264)
T 3ucx_A 84 KAYGRVDVVI-NNAFRVPSMKPFANTTFEHMRDAIEL 119 (264)
T ss_dssp HHTSCCSEEE-ECCCSCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCcEEE-ECCCCCCCCCCchhCCHHHHHHHHHH
Confidence 5444667544 443 2 12222 3466777776654
No 286
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=58.27 E-value=82 Score=28.55 Aligned_cols=103 Identities=17% Similarity=0.225 Sum_probs=55.3
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCC-----------C-----cChH---HHHhhhcCcEEEEeecCCCCC
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPY-----------Y-----PGFD---RDLRWRTGVQLVPVVCDSSND 178 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~-----------y-----~~~~---~~~~~~~G~~~~~v~~~~~~~ 178 (483)
+...++||.|++..=..+...|.+.|..|++.+-. + .... ..+... +.++..+..|-
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv--- 85 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH-NRRIVTAEVDV--- 85 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT-TCCEEEEECCT---
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc-CCceEEEEcCC---
Confidence 34456666665543344556778889888765332 0 0111 112222 66677776653
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEeCCC-CCCcC---CCCHHHHHHHHHH
Q 011570 179 FKVTMEALEAAYEKAQESNIRIKGVLITNPS-NPLGT---FLDRETLKDIVSF 227 (483)
Q Consensus 179 ~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~-NPtG~---~~~~~~l~~i~~~ 227 (483)
-|.+.+++.+++..++-.++.. +++|.. .+.+. -.+.+++++..+.
T Consensus 86 --~~~~~v~~~~~~~~~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 135 (286)
T 3uve_A 86 --RDYDALKAAVDSGVEQLGRLDI-IVANAGIGNGGDTLDKTSEEDWTEMIDI 135 (286)
T ss_dssp --TCHHHHHHHHHHHHHHHSCCCE-EEECCCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHhCCCCE-EEECCcccCCCCccccCCHHHHHHHHHH
Confidence 2577777777655444335664 444442 22222 2467777776664
No 287
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=58.11 E-value=81 Score=28.45 Aligned_cols=99 Identities=19% Similarity=0.225 Sum_probs=54.1
Q ss_pred cEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 121 RIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 121 ~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
.++|| |++.+|- .+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.+++..++
T Consensus 6 ~~lVT-Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 78 (264)
T 3tfo_A 6 VILIT-GASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA-GGTALAQVLDV-----TDRHSVAAFAQAAVDT 78 (264)
T ss_dssp EEEES-STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEe-CCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 34555 4444554 44466778888887765443222222 2232 67777777653 2577777777655444
Q ss_pred CCceeEEEEeCC-CCCCcC--CCCHHHHHHHHHH
Q 011570 197 NIRIKGVLITNP-SNPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 197 ~~~~~~i~l~~P-~NPtG~--~~~~~~l~~i~~~ 227 (483)
..++..+| +|. ..+.+. -.+.++++++.+.
T Consensus 79 ~g~iD~lV-nnAG~~~~~~~~~~~~~~~~~~~~v 111 (264)
T 3tfo_A 79 WGRIDVLV-NNAGVMPLSPLAAVKVDEWERMIDV 111 (264)
T ss_dssp HSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 34566544 444 222222 2466777766654
No 288
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=58.02 E-value=40 Score=34.59 Aligned_cols=101 Identities=11% Similarity=0.097 Sum_probs=58.5
Q ss_pred cEEEeCChhHHHHHHHHHhcC---C----C------CeEEEeCCCCcC-------------------hHHHHhhhcCcEE
Q 011570 121 RIVMSGGATGAHETVAFCLAD---P----G------DAFLVPTPYYPG-------------------FDRDLRWRTGVQL 168 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~---~----g------d~Vlv~~P~y~~-------------------~~~~~~~~~G~~~ 168 (483)
.|.++.++..++...+++|.+ . + ...|...|.|+- +.+.+... +.++
T Consensus 142 ~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~~p~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~id~mA~~-KlN~ 220 (572)
T 3ozo_A 142 NATITANSFFGMRHGLETLSQLFVFDDIRDHLLMVRDVNISDKPVYPYRGILLDTARNYYSIESIKRTIEAMAAV-KLNT 220 (572)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTEEEETTTTEEEEESSEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHT-TCCE
T ss_pred EEEEEECCHHHHHHHHHHHHHHHhhccccccccccCceeEEecCCCccccceeccCCCCCCHHHHHHHHHHHHHc-CCce
Confidence 477888777777766666532 1 1 123455565521 11223332 6666
Q ss_pred EEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEE
Q 011570 169 VPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVC 237 (483)
Q Consensus 169 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~ 237 (483)
..+.+.++.+|.+....+-+.-.. |. ...|..++.+++++|++.|+++|+-||-
T Consensus 221 lH~HltDdqgwrlei~~~P~Lt~~----Ga-----------~~~~~~YT~~di~eiv~yA~~rgI~VIP 274 (572)
T 3ozo_A 221 FHWHITDSQSFPFVTTKRPNLYKF----GA-----------LSPQKVYTKAAIREVVRFGLERGVRVLP 274 (572)
T ss_dssp EEEECCCSSCCCBCCSSSHHHHHH----HS-----------SSSSSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEeecCcCceeccccCcchhcc----CC-----------cCCCCCcCHHHHHHHHHHHHHhCCceee
Confidence 666665555566554443332111 00 1135689999999999999999987763
No 289
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=57.92 E-value=1.1e+02 Score=27.62 Aligned_cols=102 Identities=16% Similarity=0.131 Sum_probs=56.3
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC-------h---HHHHhhhcCcEEEEeecCCCCCcccCHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPG-------F---DRDLRWRTGVQLVPVVCDSSNDFKVTMEALE 187 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~-------~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~ 187 (483)
+...++||.|+...=..+...|.+.|.+|++..-.-.. . ...+... |.++..+..|- -|.+.++
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~ 78 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA-GGQGLALKCDI-----REEDQVR 78 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH-TSEEEEEECCT-----TCHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc-CCeEEEEeCCC-----CCHHHHH
Confidence 34456666655543344556677888887766433221 1 2223333 77887777663 2577777
Q ss_pred HHHHHHHhcCCceeEEEEeCCC-CCCc--CCCCHHHHHHHHH
Q 011570 188 AAYEKAQESNIRIKGVLITNPS-NPLG--TFLDRETLKDIVS 226 (483)
Q Consensus 188 ~~i~~~~~~~~~~~~i~l~~P~-NPtG--~~~~~~~l~~i~~ 226 (483)
+.+++..++..++.. +++|.. ...+ .-.+.++++++.+
T Consensus 79 ~~~~~~~~~~g~iD~-lvnnAG~~~~~~~~~~~~~~~~~~~~ 119 (274)
T 3e03_A 79 AAVAATVDTFGGIDI-LVNNASAIWLRGTLDTPMKRFDLMQQ 119 (274)
T ss_dssp HHHHHHHHHHSCCCE-EEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCE-EEECCCcccCCCcccCCHHHHHHHHh
Confidence 777665444345664 444442 2222 1246667766665
No 290
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=56.67 E-value=86 Score=28.03 Aligned_cols=102 Identities=15% Similarity=0.043 Sum_probs=51.1
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++++++..++-.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 80 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-ADAARYVHLDV-----TQPAQWKAAVDTAVTAFG 80 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-GGGEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-hcCceEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 345666655543334455667778888877543322222222222 32344444442 256777777765443323
Q ss_pred ceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 199 RIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 199 ~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
++..+| +|.. .+.+. -.+.+++++..+.
T Consensus 81 ~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~ 111 (260)
T 1nff_A 81 GLHVLV-NNAGILNIGTIEDYALTEWQRILDV 111 (260)
T ss_dssp CCCEEE-ECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 566544 4432 22222 2456666666553
No 291
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=56.26 E-value=1.2e+02 Score=27.54 Aligned_cols=103 Identities=12% Similarity=0.078 Sum_probs=56.4
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCc-ChHHHHh---hhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYP-GFDRDLR---WRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~-~~~~~~~---~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
...++||.|+...=..+...|.+.|..|++..-.-. ....... ...+.++..+..|- -|.+.+++++++..
T Consensus 25 ~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 99 (281)
T 3v2h_A 25 TKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADM-----TKPSEIADMMAMVA 99 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCC-----CCHHHHHHHHHHHH
Confidence 345667666554334455677788988887654222 1122111 11255666666553 26777877777655
Q ss_pred hcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 195 ESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
++-.++..+| +|.. .+.+. -.+.++++++.+.
T Consensus 100 ~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~v 134 (281)
T 3v2h_A 100 DRFGGADILV-NNAGVQFVEKIEDFPVEQWDRIIAV 134 (281)
T ss_dssp HHTSSCSEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHCCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 5444666544 4442 22222 2366777776664
No 292
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=56.06 E-value=65 Score=28.97 Aligned_cols=101 Identities=19% Similarity=0.187 Sum_probs=50.7
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
..++||.|+...=..+...|.+.|..|++..-.-.......+.. +.++..+..|- -|.+.+++.+++..++-.+
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~ 80 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-EAEAIAVVADV-----SDPKAVEAVFAEALEEFGR 80 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-CSSEEEEECCT-----TSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cCceEEEEcCC-----CCHHHHHHHHHHHHHHcCC
Confidence 45666655544334455667778888777654322223333332 44555555543 2567777777654443335
Q ss_pred eeEEEEeCCCCCCcC--CCCHHHHHHHHH
Q 011570 200 IKGVLITNPSNPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 200 ~~~i~l~~P~NPtG~--~~~~~~l~~i~~ 226 (483)
+..+|-+--..+.+. -.+.++++++.+
T Consensus 81 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 109 (263)
T 2a4k_A 81 LHGVAHFAGVAHSALSWNLPLEAWEKVLR 109 (263)
T ss_dssp CCEEEEGGGGTTTTC----CHHHHHHHHH
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 665543322222222 235555555554
No 293
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=55.82 E-value=1.1e+02 Score=27.56 Aligned_cols=102 Identities=17% Similarity=0.221 Sum_probs=55.0
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCC------------cCh---HHHHhhhcCcEEEEeecCCCCCcccCH
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYY------------PGF---DRDLRWRTGVQLVPVVCDSSNDFKVTM 183 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y------------~~~---~~~~~~~~G~~~~~v~~~~~~~~~~d~ 183 (483)
...++||.|+...=..+...|.+.|..|++..-.- ... ...+... |.++..+..|- -|.
T Consensus 10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~ 83 (281)
T 3s55_A 10 GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT-GRRCISAKVDV-----KDR 83 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc-CCeEEEEeCCC-----CCH
Confidence 34566665555433445567788898887754321 011 1122233 66777777653 256
Q ss_pred HHHHHHHHHHHhcCCceeEEEEeCCC-CCCc--CCCCHHHHHHHHHH
Q 011570 184 EALEAAYEKAQESNIRIKGVLITNPS-NPLG--TFLDRETLKDIVSF 227 (483)
Q Consensus 184 ~~l~~~i~~~~~~~~~~~~i~l~~P~-NPtG--~~~~~~~l~~i~~~ 227 (483)
+.+++.+++..+.-.++..+| +|.. .+.+ .-.+.+++++..+.
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 129 (281)
T 3s55_A 84 AALESFVAEAEDTLGGIDIAI-TNAGISTIALLPEVESAQWDEVIGT 129 (281)
T ss_dssp HHHHHHHHHHHHHHTCCCEEE-ECCCCCCCCCTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 777777766544433566544 4442 2222 23466777766653
No 294
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=55.49 E-value=59 Score=29.44 Aligned_cols=102 Identities=14% Similarity=0.199 Sum_probs=54.8
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCC------------C-cChHH---HHhhhcCcEEEEeecCCCCCcccC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPY------------Y-PGFDR---DLRWRTGVQLVPVVCDSSNDFKVT 182 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~------------y-~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d 182 (483)
...++||.|+...=..+...|.+.|..|++..-. - ..... .+... +.++..+..|- -|
T Consensus 11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~ 84 (277)
T 3tsc_A 11 GRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA-NRRIVAAVVDT-----RD 84 (277)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEEEECCT-----TC
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-CCeEEEEECCC-----CC
Confidence 3456666665543345556777889888775321 1 11111 12222 66777776653 36
Q ss_pred HHHHHHHHHHHHhcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 183 MEALEAAYEKAQESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 183 ~~~l~~~i~~~~~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
.+.+++.+++..++-.++..+ ++|.. .+.+. -.+.+++++..+.
T Consensus 85 ~~~v~~~~~~~~~~~g~id~l-vnnAg~~~~~~~~~~~~~~~~~~~~v 131 (277)
T 3tsc_A 85 FDRLRKVVDDGVAALGRLDII-VANAGVAAPQAWDDITPEDFRDVMDI 131 (277)
T ss_dssp HHHHHHHHHHHHHHHSCCCEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 777777776654443456644 44442 22222 3466777776664
No 295
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=55.02 E-value=1.2e+02 Score=27.50 Aligned_cols=103 Identities=15% Similarity=0.213 Sum_probs=56.2
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChH----HHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFD----RDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~----~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
+...++||.|+...=..+...|.+.|..|++..-.-.... ...... |.++..+..|- -|.+.+++++++.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-GVKCVLLPGDL-----SDEQHCKDIVQET 119 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-TCCEEEEESCT-----TSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHHH
Confidence 3345666666554334455677788988776644332111 122332 66777777653 2677777777665
Q ss_pred HhcCCceeEEEEeCCC--CCCcC--CCCHHHHHHHHHH
Q 011570 194 QESNIRIKGVLITNPS--NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P~--NPtG~--~~~~~~l~~i~~~ 227 (483)
.++..++..+| +|.. .+.+. -.+.++++++.+.
T Consensus 120 ~~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~~v 156 (291)
T 3ijr_A 120 VRQLGSLNILV-NNVAQQYPQQGLEYITAEQLEKTFRI 156 (291)
T ss_dssp HHHHSSCCEEE-ECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEE-ECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 44434566544 4432 22222 2366777776664
No 296
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=54.50 E-value=72 Score=28.66 Aligned_cols=102 Identities=15% Similarity=0.131 Sum_probs=51.7
Q ss_pred CcEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHHHHhhh---cCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 120 DRIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDRDLRWR---TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 120 ~~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~---~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
..++||.| +.+|- .+...|.+.|..|++..-.-.......... .|.++..+..|-. |.+.+++.+++..+
T Consensus 21 k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 21 KRALITGA-TKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLA-----EPDAPAELARRAAE 94 (266)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----STTHHHHHHHHHHH
T ss_pred CEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHHH
Confidence 34555544 44444 444667788888877654433222222211 2666766665532 45556555554433
Q ss_pred cCCceeEEEEeCCCCCCc--CCCCHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPSNPLG--TFLDRETLKDIVSF 227 (483)
Q Consensus 196 ~~~~~~~i~l~~P~NPtG--~~~~~~~l~~i~~~ 227 (483)
+-.++..+|.+--....+ .-.+.+++++..+.
T Consensus 95 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 128 (266)
T 4egf_A 95 AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAV 128 (266)
T ss_dssp HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 333566554442222212 12466667666654
No 297
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=54.46 E-value=1.1e+02 Score=26.93 Aligned_cols=102 Identities=18% Similarity=0.186 Sum_probs=53.8
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++++++..+
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~~~~~~~~~~~~~~~ 80 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA-GAKVHVLELDV-----ADRQGVDAAVASTVE 80 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 34567776655433445566778888777654332222221 2222 55666666553 256777777765444
Q ss_pred cCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 196 ~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
.-.++..+| +|.. .+.+. -.+.++++++.+.
T Consensus 81 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (247)
T 2jah_A 81 ALGGLDILV-NNAGIMLLGPVEDADTTDWTRMIDT 114 (247)
T ss_dssp HHSCCSEEE-ECCCCCCCCCSTTCCHHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCchhhCCHHHHHHHHHH
Confidence 333566544 4432 22232 2466667666653
No 298
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=54.45 E-value=93 Score=27.79 Aligned_cols=99 Identities=13% Similarity=0.160 Sum_probs=53.2
Q ss_pred cEEEeCChhHHHH-HHHHHhcCCCCeEEEe-CCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 121 RIVMSGGATGAHE-TVAFCLADPGDAFLVP-TPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 121 ~i~it~G~~~al~-~~~~~l~~~gd~Vlv~-~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
.++||.| +.+|- .+...|.+.|..|++. ...-...... +... |.++..+..|- -|.+.+++.++...+
T Consensus 6 ~vlVTGa-s~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 78 (258)
T 3oid_A 6 CALVTGS-SRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL-GVKVLVVKANV-----GQPAKIKEMFQQIDE 78 (258)
T ss_dssp EEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred EEEEecC-CchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 3555544 44444 4446677889887764 4333222222 2222 66777776653 267777777766544
Q ss_pred cCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 196 ~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
+-.++..+| +|.. .+.+. -.+.+++++..+.
T Consensus 79 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~v 112 (258)
T 3oid_A 79 TFGRLDVFV-NNAASGVLRPVMELEETHWDWTMNI 112 (258)
T ss_dssp HHSCCCEEE-ECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 434566544 4442 22222 3566777666654
No 299
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=54.38 E-value=49 Score=29.91 Aligned_cols=100 Identities=13% Similarity=0.187 Sum_probs=53.9
Q ss_pred CcEEEeCChhHHHH-HHHHHhcCCCCeEEEeCC-CCcCh---HHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 120 DRIVMSGGATGAHE-TVAFCLADPGDAFLVPTP-YYPGF---DRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 120 ~~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P-~y~~~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
..++||.|+ .+|- .+...|.+.|..|++..- .-... ...++.. |.++..+..|- -|.+.+++.+++..
T Consensus 19 k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 91 (270)
T 3is3_A 19 KVALVTGSG-RGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL-GSDAIAIKADI-----RQVPEIVKLFDQAV 91 (270)
T ss_dssp CEEEESCTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 345555544 4444 445667788988876432 21111 1223333 67777777653 26777777776654
Q ss_pred hcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 195 ESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
++-.++..+ ++|.. .+.+. -.+.+++++..+.
T Consensus 92 ~~~g~id~l-vnnAg~~~~~~~~~~~~~~~~~~~~~ 126 (270)
T 3is3_A 92 AHFGHLDIA-VSNSGVVSFGHLKDVTEEEFDRVFSL 126 (270)
T ss_dssp HHHSCCCEE-ECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHHH
Confidence 443356644 44442 22232 2366777776664
No 300
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=53.93 E-value=91 Score=27.92 Aligned_cols=104 Identities=16% Similarity=0.149 Sum_probs=55.8
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhh----hcCcEEEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRW----RTGVQLVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
+...++||.|+...=..+...|.+.|..|++..-.-......... ..+.++..+..|- -|.+.+++.+++.
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~ 81 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDV-----LDALQVRAFAEAC 81 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCC-----CCHHHHHHHHHHH
Confidence 444566666655433445566778898887765443322222221 2133466666553 2567777776655
Q ss_pred HhcCCceeEEEEeCC-CCCCcC--CCCHHHHHHHHHH
Q 011570 194 QESNIRIKGVLITNP-SNPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P-~NPtG~--~~~~~~l~~i~~~ 227 (483)
.+.-.++..+ ++|. ..+.+. -.+.+++++..+.
T Consensus 82 ~~~~g~id~l-vnnAg~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T 3lf2_A 82 ERTLGCASIL-VNNAGQGRVSTFAETTDEAWSEELQL 117 (265)
T ss_dssp HHHHCSCSEE-EECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHHcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4433356644 4444 233332 3567777777664
No 301
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=53.52 E-value=55 Score=29.59 Aligned_cols=103 Identities=17% Similarity=0.195 Sum_probs=54.4
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCC-CCcChH---HHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTP-YYPGFD---RDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P-~y~~~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
+...++||.|+...=..+...|.+.|..|++..- .-.... ..+... |.++..+..|- -|.+.+++.+++.
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA-GGEAFAVKADV-----SQESEVEALFAAV 100 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHHH
Confidence 3344555555443333445667788988776533 211111 222333 66777776653 2677777777665
Q ss_pred HhcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 194 QESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
.++-.++..+| +|.. .+.+. -.+.++++++.+.
T Consensus 101 ~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~v 136 (269)
T 4dmm_A 101 IERWGRLDVLV-NNAGITRDTLLLRMKRDDWQSVLDL 136 (269)
T ss_dssp HHHHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 44434566544 4442 22221 2466777776664
No 302
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=53.45 E-value=1.1e+02 Score=27.07 Aligned_cols=100 Identities=17% Similarity=0.190 Sum_probs=52.2
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
.++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++++++..++-
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 77 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA-GGHAVAVKVDV-----SDRDQVFAAVEQARKTL 77 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TSHHHHHHHHHHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecC-----CCHHHHHHHHHHHHHHh
Confidence 356665544333344566777888877664332212221 2222 55666666543 25777777776654443
Q ss_pred CceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 198 IRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 198 ~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
.++..+| +|.. .+.+. -.+.++++++.+.
T Consensus 78 g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 109 (256)
T 1geg_A 78 GGFDVIV-NNAGVAPSTPIESITPEIVDKVYNI 109 (256)
T ss_dssp TCCCEEE-ECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCCCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 4566544 4442 22222 2466666666653
No 303
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=53.35 E-value=72 Score=28.84 Aligned_cols=104 Identities=15% Similarity=0.162 Sum_probs=56.6
Q ss_pred cCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEe-CCCCcCh---HHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHH
Q 011570 117 FDPDRIVMSGGATGAHETVAFCLADPGDAFLVP-TPYYPGF---DRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEK 192 (483)
Q Consensus 117 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~P~y~~~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~ 192 (483)
++...++||.|+...=..+...|.+.|..|++. ...-... ...+... |.++..+..|- -|.+.+++.+++
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~ 102 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA-GGRAVAIRADN-----RDAEAIEQAIRE 102 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHH
Confidence 344456666665543344556677889887765 3221111 1223333 77777777653 367777777766
Q ss_pred HHhcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 193 AQESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 193 ~~~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
..++-.++..+ ++|.. ...+. -.+.++++++.+.
T Consensus 103 ~~~~~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~v 139 (271)
T 3v2g_A 103 TVEALGGLDIL-VNSAGIWHSAPLEETTVADFDEVMAV 139 (271)
T ss_dssp HHHHHSCCCEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCcEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 54443456654 44442 22221 2466777776654
No 304
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=53.30 E-value=1.1e+02 Score=27.39 Aligned_cols=102 Identities=17% Similarity=0.247 Sum_probs=53.3
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH----hhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL----RWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~----~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
...++||.|+...=..+...|.+.|..|++..-.-....... ... |.++..+..|- -|.+.+++++++..
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 94 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDV-----SNYEEVKKLLEAVK 94 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 345666655544334455667788888877654322222221 222 66666666543 25677777776544
Q ss_pred hcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 195 ESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
++-.++..+| +|.. ...+. -.+.++++++.+.
T Consensus 95 ~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~~ 129 (267)
T 1vl8_A 95 EKFGKLDTVV-NAAGINRRHPAEEFPLDEFRQVIEV 129 (267)
T ss_dssp HHHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCcCCCCChhhCCHHHHHHHHHH
Confidence 3323566554 4432 22221 2466666666653
No 305
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=52.73 E-value=1.2e+02 Score=27.08 Aligned_cols=105 Identities=12% Similarity=0.152 Sum_probs=55.6
Q ss_pred cCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcCh----HHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHH
Q 011570 117 FDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGF----DRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEK 192 (483)
Q Consensus 117 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~ 192 (483)
++...++||.|+...=..+...|.+.|..|++..-.-... ...++.. |.++..+..|- -|.+.+++.+++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~ 100 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK-GYKAAVIKFDA-----ASESDFIEAIQT 100 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHH
Confidence 3444566665554433445566778888777654422211 1223333 66777776653 256777777766
Q ss_pred HHhcCCceeEEEEeCCCCCCc--CCCCHHHHHHHHHH
Q 011570 193 AQESNIRIKGVLITNPSNPLG--TFLDRETLKDIVSF 227 (483)
Q Consensus 193 ~~~~~~~~~~i~l~~P~NPtG--~~~~~~~l~~i~~~ 227 (483)
..+...++..+|.+--..+.+ .-.+.+++++..+.
T Consensus 101 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 137 (271)
T 4iin_A 101 IVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDN 137 (271)
T ss_dssp HHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHh
Confidence 544434666554432222222 23466667666653
No 306
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=52.68 E-value=92 Score=27.77 Aligned_cols=102 Identities=14% Similarity=0.102 Sum_probs=50.6
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......... ..++..+..|- -|.+.+++++++..++-.
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~d~~~v~~~~~~~~~~~g 85 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-ENGGFAVEVDV-----TKRASVDAAMQKAIDALG 85 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-TTCCEEEECCT-----TCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-hcCCeEEEEeC-----CCHHHHHHHHHHHHHHcC
Confidence 345666655544334455667788888877643322222222222 22333444432 256777777665444333
Q ss_pred ceeEEEEeCCC-CCCc--CCCCHHHHHHHHHH
Q 011570 199 RIKGVLITNPS-NPLG--TFLDRETLKDIVSF 227 (483)
Q Consensus 199 ~~~~i~l~~P~-NPtG--~~~~~~~l~~i~~~ 227 (483)
++..+| +|.. .+.+ .-.+.+++++..+.
T Consensus 86 ~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~ 116 (263)
T 3ak4_A 86 GFDLLC-ANAGVSTMRPAVDITDEEWDFNFDV 116 (263)
T ss_dssp CCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEE-ECCCcCCCCChhhCCHHHHHHHHHH
Confidence 566544 4442 2222 12466666666553
No 307
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=52.61 E-value=1.3e+02 Score=26.84 Aligned_cols=103 Identities=17% Similarity=0.198 Sum_probs=54.5
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEe-CCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVP-TPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
+...++||.|+...=..+...|.+.|..|++. ...-...... +... |.++..+..|- -|.+.+++.+++.
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~ 80 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL-GRSALAIKADL-----TNAAEVEAAISAA 80 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT-TSCCEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCceEEEEcCC-----CCHHHHHHHHHHH
Confidence 33456666655543344556677889887765 4333222222 2222 65666666553 2577777777665
Q ss_pred HhcCCceeEEEEeCCC-C-CCcC--CCCHHHHHHHHHH
Q 011570 194 QESNIRIKGVLITNPS-N-PLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P~-N-PtG~--~~~~~~l~~i~~~ 227 (483)
.++-.++..++ +|.. . +.+. -.+.+++++..+.
T Consensus 81 ~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~v 117 (259)
T 3edm_A 81 ADKFGEIHGLV-HVAGGLIARKTIAEMDEAFWHQVLDV 117 (259)
T ss_dssp HHHHCSEEEEE-ECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHHhCCCCEEE-ECCCccCCCCChhhCCHHHHHHHHHH
Confidence 44434566544 4442 2 2222 3466666666553
No 308
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=52.40 E-value=75 Score=29.57 Aligned_cols=99 Identities=13% Similarity=0.122 Sum_probs=54.0
Q ss_pred cEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCC----------CcCh---HHHHhhhcCcEEEEeecCCCCCcccCHHHH
Q 011570 121 RIVMSGGATGAHE-TVAFCLADPGDAFLVPTPY----------YPGF---DRDLRWRTGVQLVPVVCDSSNDFKVTMEAL 186 (483)
Q Consensus 121 ~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~----------y~~~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l 186 (483)
.++||.| +.+|- .+...|.+.|..|++..-. -... ...+... |.++..+..|- -|.+.+
T Consensus 29 ~vlVTGa-s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v 101 (322)
T 3qlj_A 29 VVIVTGA-GGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA-GGEAVADGSNV-----ADWDQA 101 (322)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT-TCEEEEECCCT-----TSHHHH
T ss_pred EEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHH
Confidence 4555544 44554 4446677889888776432 1111 2223333 77777777653 367777
Q ss_pred HHHHHHHHhcCCceeEEEEeCCC-CCCc--CCCCHHHHHHHHHH
Q 011570 187 EAAYEKAQESNIRIKGVLITNPS-NPLG--TFLDRETLKDIVSF 227 (483)
Q Consensus 187 ~~~i~~~~~~~~~~~~i~l~~P~-NPtG--~~~~~~~l~~i~~~ 227 (483)
++.+++..++-.++.. +++|.. ...+ .-.+.++++++.+.
T Consensus 102 ~~~~~~~~~~~g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~v 144 (322)
T 3qlj_A 102 AGLIQTAVETFGGLDV-LVNNAGIVRDRMIANTSEEEFDAVIAV 144 (322)
T ss_dssp HHHHHHHHHHHSCCCE-EECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 7777665444335664 444442 2222 12466777776664
No 309
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=51.54 E-value=1.2e+02 Score=26.51 Aligned_cols=102 Identities=18% Similarity=0.224 Sum_probs=51.7
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEE-EEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQL-VPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~-~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
+...++||.|+...=..+...|.+.|..|++..-.-.......... +.++ ..+..|- -|.+.+++++++..+
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~- 82 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-GAAVAARIVADV-----TDAEAMTAAAAEAEA- 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEEECCT-----TCHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cccceeEEEEec-----CCHHHHHHHHHHHHh-
Confidence 3445777755544334555667778888777654322222333333 4444 4444432 256777777665433
Q ss_pred CCceeEEEEeCCCCCCcC--CCCHHHHHHHHH
Q 011570 197 NIRIKGVLITNPSNPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 197 ~~~~~~i~l~~P~NPtG~--~~~~~~l~~i~~ 226 (483)
..++..+|-+-...+.+. -.+.+++++..+
T Consensus 83 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (254)
T 2wsb_A 83 VAPVSILVNSAGIARLHDALETDDATWRQVMA 114 (254)
T ss_dssp HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHH
T ss_pred hCCCcEEEECCccCCCCCcccCCHHHHHHHHH
Confidence 235665544322222222 235566665554
No 310
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=51.48 E-value=84 Score=28.03 Aligned_cols=104 Identities=13% Similarity=0.125 Sum_probs=56.0
Q ss_pred CCCcEEEeCChh-HHHH-HHHHHhcCCCCeEEEeCCCCcCh-HHHHh---hhcCcEEEEeecCCCCCcccCHHHHHHHHH
Q 011570 118 DPDRIVMSGGAT-GAHE-TVAFCLADPGDAFLVPTPYYPGF-DRDLR---WRTGVQLVPVVCDSSNDFKVTMEALEAAYE 191 (483)
Q Consensus 118 ~~~~i~it~G~~-~al~-~~~~~l~~~gd~Vlv~~P~y~~~-~~~~~---~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~ 191 (483)
....++||.|+. .+|- .+...|.+.|..|++..-.-... ....+ ...|.++..+..|- -|.+.+++.++
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~~ 93 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQV-----DSYESCEKLVK 93 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCC-----CCHHHHHHHHH
Confidence 344567766551 3333 34456677888877764433222 22221 11267777777653 26778888777
Q ss_pred HHHhcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 192 KAQESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 192 ~~~~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
+..++..++..+| +|.. .+.+. -.+.+++++..+.
T Consensus 94 ~~~~~~g~id~li-~nAg~~~~~~~~~~~~~~~~~~~~~ 131 (267)
T 3gdg_A 94 DVVADFGQIDAFI-ANAGATADSGILDGSVEAWNHVVQV 131 (267)
T ss_dssp HHHHHTSCCSEEE-ECCCCCCCSCTTTSCHHHHHHHHHH
T ss_pred HHHHHcCCCCEEE-ECCCcCCCCCcccCCHHHHHHHHHh
Confidence 6655545677554 4442 22222 2366666666653
No 311
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=51.28 E-value=1.2e+02 Score=31.56 Aligned_cols=110 Identities=10% Similarity=0.092 Sum_probs=64.6
Q ss_pred CCcCCCcEEEeCChhHHHHHHHHHhc---CCC--CeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHH
Q 011570 115 ITFDPDRIVMSGGATGAHETVAFCLA---DPG--DAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAA 189 (483)
Q Consensus 115 ~~~~~~~i~it~G~~~al~~~~~~l~---~~g--d~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~ 189 (483)
+.++++.|.|+.++..++...+++|. ..+ ...+...|.|+- . |+ -+|-..+--+.++.+++.
T Consensus 41 L~i~~~~i~I~a~~~~G~~~glqTL~QL~~~~~~~~~I~D~P~f~~-------R-G~-----mlD~sR~~f~~~~~ik~~ 107 (627)
T 2epl_X 41 VEGRQGYYQVSYKQPHQLYRALALLSAALRSGQDEVQIEEEAAYED-------L-AY-----MADCSRNAVLNLSSAKKM 107 (627)
T ss_dssp EEEETTEEEEEESSTTHHHHHHHHHHHHHHTTCSSEEEEECCSCSE-------E-EE-----EEECSSSCCBCHHHHHHH
T ss_pred EEEeCCEEEEEECCHHHHHHHHHHHHHHhhcCCCceEEEeCCCCCc-------c-ce-----EEecCCCCCCCHHHHHHH
Confidence 34667789998777666555554442 222 345556666631 1 22 222222202567888887
Q ss_pred HHHHHhcCCceeEEEEeC----CCCC----CcCCCCHHHHHHHHHHHhhcCcEEEE
Q 011570 190 YEKAQESNIRIKGVLITN----PSNP----LGTFLDRETLKDIVSFINEKNIHLVC 237 (483)
Q Consensus 190 i~~~~~~~~~~~~i~l~~----P~NP----tG~~~~~~~l~~i~~~a~~~~~~iI~ 237 (483)
|+.....+-++=.+-++. +..| .|..+|.+++++|++.|+++|+-||-
T Consensus 108 id~ma~~KlN~lh~Hl~D~~ei~~~P~l~~~~~~YT~~di~eiv~yA~~rgI~VIP 163 (627)
T 2epl_X 108 IEVLALMGYSTFELYMEDTYEIENQPYFGYFRGRYTVAELQEIEDYAADFDMSFVP 163 (627)
T ss_dssp HHHHHHHTCCEEEEECSSCBCCTTCTTTTTTTTCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHcCCcEEEEEeecccccCCCcccCccCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 776544433332233332 2223 46789999999999999999988774
No 312
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=51.26 E-value=1.3e+02 Score=27.17 Aligned_cols=103 Identities=14% Similarity=0.081 Sum_probs=56.8
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh--cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR--TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......... .|.++..+..|- -|.+.+++++++..++
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADV-----SDELQMRNAVRDLVLK 102 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 345666665554334455667788988877654433333322221 256677777653 2677777777665444
Q ss_pred CCceeEEEEeCCC-C-CCcC--CCCHHHHHHHHHH
Q 011570 197 NIRIKGVLITNPS-N-PLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 197 ~~~~~~i~l~~P~-N-PtG~--~~~~~~l~~i~~~ 227 (483)
-.++..+ ++|.. . +.+. -.+.++++++.+.
T Consensus 103 ~g~iD~l-VnnAg~~~~~~~~~~~~~~~~~~~~~v 136 (283)
T 3v8b_A 103 FGHLDIV-VANAGINGVWAPIDDLKPFEWDETIAV 136 (283)
T ss_dssp HSCCCEE-EECCCCCCCBCCTTTSCHHHHHHHHHH
T ss_pred hCCCCEE-EECCCCCCCCCchhhCCHHHHHHHHHH
Confidence 3466654 44442 1 2122 3466777766653
No 313
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=51.14 E-value=1.2e+02 Score=28.09 Aligned_cols=101 Identities=21% Similarity=0.270 Sum_probs=53.7
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCC-------Cc-----ChH---HHHhhhcCcEEEEeecCCCCCcccCHH
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPY-------YP-----GFD---RDLRWRTGVQLVPVVCDSSNDFKVTME 184 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~-------y~-----~~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~ 184 (483)
..++||.|+...=..+...|.+.|..|++.+-. +. ... ..+... |.++..+..|- -|.+
T Consensus 47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~ 120 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ-GRRIIARQADV-----RDLA 120 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc-CCeEEEEECCC-----CCHH
Confidence 345555554433344556677889887765322 10 111 122233 66777777653 2577
Q ss_pred HHHHHHHHHHhcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 185 ALEAAYEKAQESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 185 ~l~~~i~~~~~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
.+++.+++..++-.++..+ ++|.. .+.+. -++.++++++.+.
T Consensus 121 ~v~~~~~~~~~~~g~iD~l-VnnAg~~~~~~~~~~~~~~~~~~~~v 165 (317)
T 3oec_A 121 SLQAVVDEALAEFGHIDIL-VSNVGISNQGEVVSLTDQQWSDILQT 165 (317)
T ss_dssp HHHHHHHHHHHHHSCCCEE-EECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHHH
Confidence 7777776654443456644 44442 22232 3466777766653
No 314
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=50.79 E-value=1.3e+02 Score=26.50 Aligned_cols=100 Identities=12% Similarity=0.212 Sum_probs=53.4
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCC-cChH---HHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYY-PGFD---RDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y-~~~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
.++||.|+...=..+...|.+.|..|++..-.- .... ..+... |.++..+..|- -|.+.+++.+++..++
T Consensus 6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK-GVDSFAIQANV-----ADADEVKAMIKEVVSQ 79 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 455555544333344466778898887643322 2111 223333 66777776653 2677777777665444
Q ss_pred CCceeEEEEeCCC-CCCc--CCCCHHHHHHHHHH
Q 011570 197 NIRIKGVLITNPS-NPLG--TFLDRETLKDIVSF 227 (483)
Q Consensus 197 ~~~~~~i~l~~P~-NPtG--~~~~~~~l~~i~~~ 227 (483)
-.++..++ +|.. .+.+ .-.+.++++++.+.
T Consensus 80 ~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~v 112 (246)
T 3osu_A 80 FGSLDVLV-NNAGITRDNLLMRMKEQEWDDVIDT 112 (246)
T ss_dssp HSCCCEEE-ECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 34566544 4442 2222 23466777766654
No 315
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=50.71 E-value=1.2e+02 Score=26.76 Aligned_cols=103 Identities=19% Similarity=0.177 Sum_probs=56.3
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
+...++||.|+...=..+...|.+.|..|++..-.-...... +... +.++..+..|- -|.+.+++.+++..
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD-GGTAISVAVDV-----SDPESAKAMADRTL 81 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCcEEEEEccC-----CCHHHHHHHHHHHH
Confidence 344566666655433445566778888887765443322222 2222 66777777653 25677777776554
Q ss_pred hcCCceeEEEEeCCCC----CCc--CCCCHHHHHHHHHH
Q 011570 195 ESNIRIKGVLITNPSN----PLG--TFLDRETLKDIVSF 227 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~N----PtG--~~~~~~~l~~i~~~ 227 (483)
+...++..++ +|..- +.+ .-.+.+++++..+.
T Consensus 82 ~~~g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ 119 (253)
T 3qiv_A 82 AEFGGIDYLV-NNAAIFGGMKLDFLLTIDPEYYKKFMSV 119 (253)
T ss_dssp HHHSCCCEEE-ECCCCCCGGGGGCTTTSCHHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCcCCCCCCcccccCCHHHHHHHHhh
Confidence 4434566544 44421 111 13466667666653
No 316
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=50.69 E-value=1.3e+02 Score=26.60 Aligned_cols=103 Identities=18% Similarity=0.155 Sum_probs=52.4
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh---cCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR---TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~---~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
+...++||.|+...=..+...|.+.|..|++..-.-.......... .|.++..+..|- -|.+.+++++++..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~ 80 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDV-----ATPEGVDAVVESVR 80 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3345677766554334455667778888777643322222221111 155566666543 25677777776544
Q ss_pred hcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHH
Q 011570 195 ESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~ 226 (483)
+.-.++..+| +|.. .+.+. -.+.+++++..+
T Consensus 81 ~~~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (263)
T 3ai3_A 81 SSFGGADILV-NNAGTGSNETIMEAADEKWQFYWE 114 (263)
T ss_dssp HHHSSCSEEE-ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 3323566544 4442 22222 236666666555
No 317
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=50.35 E-value=1.3e+02 Score=26.86 Aligned_cols=83 Identities=12% Similarity=0.166 Sum_probs=44.9
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
....++||.|+...=..+...|.+.|..|++..-.-...... ++.. |.++..+..|- -|.+.+++++++..
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-GAKVHTFVVDC-----SNREDIYSSAKKVK 103 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc-CCeEEEEEeeC-----CCHHHHHHHHHHHH
Confidence 344567766554433445566777888877765432222222 2222 55666666543 25677777776554
Q ss_pred hcCCceeEEEEe
Q 011570 195 ESNIRIKGVLIT 206 (483)
Q Consensus 195 ~~~~~~~~i~l~ 206 (483)
+.-.++..||-+
T Consensus 104 ~~~g~iD~li~~ 115 (272)
T 1yb1_A 104 AEIGDVSILVNN 115 (272)
T ss_dssp HHTCCCSEEEEC
T ss_pred HHCCCCcEEEEC
Confidence 443456655444
No 318
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=50.31 E-value=74 Score=28.78 Aligned_cols=102 Identities=21% Similarity=0.212 Sum_probs=54.3
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCC--------C-----cCh---HHHHhhhcCcEEEEeecCCCCCcccC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPY--------Y-----PGF---DRDLRWRTGVQLVPVVCDSSNDFKVT 182 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~--------y-----~~~---~~~~~~~~G~~~~~v~~~~~~~~~~d 182 (483)
...++||.|+...=..+...|.+.|..|++..-. | ... ...+... |.++..+..|- -|
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~ 88 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ-GRKALTRVLDV-----RD 88 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT-TCCEEEEECCT-----TC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-CCeEEEEEcCC-----CC
Confidence 3456666555543344556777889888775431 1 111 1122222 66777766653 25
Q ss_pred HHHHHHHHHHHHhcCCceeEEEEeCC-CCCCcC--CCCHHHHHHHHHH
Q 011570 183 MEALEAAYEKAQESNIRIKGVLITNP-SNPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 183 ~~~l~~~i~~~~~~~~~~~~i~l~~P-~NPtG~--~~~~~~l~~i~~~ 227 (483)
.+.+++.+++..++-.++..+| +|. ..+.+. -.+.++++++.+.
T Consensus 89 ~~~v~~~~~~~~~~~g~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~~ 135 (280)
T 3pgx_A 89 DAALRELVADGMEQFGRLDVVV-ANAGVLSWGRVWELTDEQWDTVIGV 135 (280)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEE-ECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHhh
Confidence 7777777765544434566544 444 222222 2466777766653
No 319
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=50.19 E-value=1.3e+02 Score=26.42 Aligned_cols=102 Identities=16% Similarity=0.186 Sum_probs=53.8
Q ss_pred CCcEEEeCChhHHHH-HHHHHhcCCCCeEEEeC-CCCcChH---HHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 119 PDRIVMSGGATGAHE-TVAFCLADPGDAFLVPT-PYYPGFD---RDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 119 ~~~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~-P~y~~~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
+...++.+|++.+|- .+...|.+.|..|++.. ..-.... ..+... +.++..+..|- -|.+.+++.+++.
T Consensus 12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~ 85 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL-GFDFYASEGNV-----GDWDSTKQAFDKV 85 (256)
T ss_dssp -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT-TCCCEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCeeEEEecCC-----CCHHHHHHHHHHH
Confidence 344444455555554 44466778887777643 3332222 223333 66666666543 3677777777766
Q ss_pred HhcCCceeEEEEeCCC-CCCc--CCCCHHHHHHHHHH
Q 011570 194 QESNIRIKGVLITNPS-NPLG--TFLDRETLKDIVSF 227 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P~-NPtG--~~~~~~~l~~i~~~ 227 (483)
.++..++..+| +|.. .+.+ .-.+.+++++..+.
T Consensus 86 ~~~~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~v 121 (256)
T 3ezl_A 86 KAEVGEIDVLV-NNAGITRDVVFRKMTREDWQAVIDT 121 (256)
T ss_dssp HHHTCCEEEEE-ECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHhcCCCCEEE-ECCCCCCCCchhhCCHHHHHHHHHH
Confidence 55544676544 4442 2222 23466666666653
No 320
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=50.19 E-value=1.2e+02 Score=26.43 Aligned_cols=103 Identities=8% Similarity=0.068 Sum_probs=49.0
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhc-CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRT-GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~-G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
..++||.|+...=..+...|.+.|..|++..-.-........... ..++..+..|- -|.+.+++.+......-.
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~ 81 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS-----SDEDGWTKLFDATEKAFG 81 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCC-----CCHHHHHHHHHHHHHHhC
Confidence 345555544433334456677788877765433222222222220 12344444432 256777776665433323
Q ss_pred ceeEEEEeCCCCCCcC--CCCHHHHHHHHHH
Q 011570 199 RIKGVLITNPSNPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 199 ~~~~i~l~~P~NPtG~--~~~~~~l~~i~~~ 227 (483)
++..||.+--..+.+. -.+.+++++..+.
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (251)
T 1zk4_A 82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAV 112 (251)
T ss_dssp SCCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHh
Confidence 5665554432222222 2466666666553
No 321
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=49.74 E-value=1e+02 Score=27.46 Aligned_cols=104 Identities=21% Similarity=0.198 Sum_probs=54.8
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh--cC-cEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR--TG-VQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~G-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
....++||.|+...=..+...|.+.|..|++..-.-.......... .+ .++..+..|- -|.+.+++.+++..
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDV-----SDRAQCDALAGRAV 83 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3345666655543333445667788988877654433222222211 13 4666666553 25677777776554
Q ss_pred hcCCceeEEEEeCC-CCCCcC--CCCHHHHHHHHHH
Q 011570 195 ESNIRIKGVLITNP-SNPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 195 ~~~~~~~~i~l~~P-~NPtG~--~~~~~~l~~i~~~ 227 (483)
++-.++..+| +|. ..+.+. -.+.++++++.+.
T Consensus 84 ~~~g~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~~ 118 (262)
T 3pk0_A 84 EEFGGIDVVC-ANAGVFPDAPLATMTPEQLNGIFAV 118 (262)
T ss_dssp HHHSCCSEEE-ECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHhCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 4434566544 444 222222 3466777766654
No 322
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=49.45 E-value=1e+02 Score=27.81 Aligned_cols=100 Identities=13% Similarity=0.157 Sum_probs=53.1
Q ss_pred CcEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 120 DRIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 120 ~~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
..++||.| +.+|- .+...|.+.|..|++..-.-..... .+... |.++..+..|- -|.+.+++.+++..+
T Consensus 29 k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 101 (270)
T 3ftp_A 29 QVAIVTGA-SRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA-GLEGRGAVLNV-----NDATAVDALVESTLK 101 (270)
T ss_dssp CEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-TCCCEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEEeC-----CCHHHHHHHHHHHHH
Confidence 34555544 44554 4446677889888776544322222 22233 55555555542 256777777765544
Q ss_pred cCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 196 ~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
+-.++.. +++|.. .+.+. -.+.++++++.+.
T Consensus 102 ~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~v 135 (270)
T 3ftp_A 102 EFGALNV-LVNNAGITQDQLAMRMKDDEWDAVIDT 135 (270)
T ss_dssp HHSCCCE-EEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3335664 444442 22222 3466777776664
No 323
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=48.87 E-value=1.4e+02 Score=26.44 Aligned_cols=101 Identities=18% Similarity=0.150 Sum_probs=51.3
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC-hHHHHhhh---cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPG-FDRDLRWR---TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~-~~~~~~~~---~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
.++||.|+...=..+...|.+.|..|++..-.-.. ........ .|.++..+..|- -|.+.+++.+++..++
T Consensus 6 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-----SKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-----TSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCC-----CCHHHHHHHHHHHHHh
Confidence 45555544433334446677888888776543332 22222111 155666665543 2567777777654433
Q ss_pred CCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 197 NIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 197 ~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
-.++..+| +|.. .+.+. -.+.+++++..+.
T Consensus 81 ~g~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (260)
T 1x1t_A 81 MGRIDILV-NNAGIQHTALIEDFPTEKWDAILAL 113 (260)
T ss_dssp HSCCSEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 33566544 4442 22221 2466666666653
No 324
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=48.68 E-value=1e+02 Score=28.83 Aligned_cols=100 Identities=19% Similarity=0.204 Sum_probs=52.3
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCC--Cc------ChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHH
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPY--YP------GFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEK 192 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~--y~------~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~ 192 (483)
.++||.|+...=..+...|.+.|..|++..-. -. .....+... |.++..+.+|- -|.+.+++++++
T Consensus 7 ~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~-~~~~~~~~~Dv-----td~~~v~~~~~~ 80 (324)
T 3u9l_A 7 IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN-DVDLRTLELDV-----QSQVSVDRAIDQ 80 (324)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH-TCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc-CCcEEEEEeec-----CCHHHHHHHHHH
Confidence 45555554433334556778889888764321 11 111122233 66666666653 257777777766
Q ss_pred HHhcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 193 AQESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 193 ~~~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
..++..++.. +++|.. .+.|. -.+.++++++.+.
T Consensus 81 ~~~~~g~iD~-lVnnAG~~~~~~~~~~~~~~~~~~~~v 117 (324)
T 3u9l_A 81 IIGEDGRIDV-LIHNAGHMVFGPAEAFTPEQFAELYDI 117 (324)
T ss_dssp HHHHHSCCSE-EEECCCCCBCSCGGGSCHHHHHHHHHH
T ss_pred HHHHcCCCCE-EEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 5444345664 445443 22222 2366666666553
No 325
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=48.43 E-value=1.6e+02 Score=26.71 Aligned_cols=102 Identities=15% Similarity=0.181 Sum_probs=52.6
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh---cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR---TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~---~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
..++||.|+...=..+...|.+.|..|++..-.-.......... .+.++..+..|- -|.+.++++++...+.
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV-----RDPDMVQNTVSELIKV 101 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC-----CCHHHHHHHHHHHHHH
Confidence 45667665543334455667778888777654332222222111 155566666543 2577787777665444
Q ss_pred CCceeEEEEeCCCCCCcC--CCCHHHHHHHHH
Q 011570 197 NIRIKGVLITNPSNPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 197 ~~~~~~i~l~~P~NPtG~--~~~~~~l~~i~~ 226 (483)
..++..||-+--..+.+. -.+.+++++..+
T Consensus 102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 133 (302)
T 1w6u_A 102 AGHPNIVINNAAGNFISPTERLSPNAWKTITD 133 (302)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 445675554322222221 245566665554
No 326
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=48.40 E-value=1.4e+02 Score=26.04 Aligned_cols=103 Identities=13% Similarity=0.073 Sum_probs=51.6
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh---cCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR---TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~---~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......... .+.++..+..|- -|.+.+++++++..+
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 81 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNL-----LSEESINKAFEEIYN 81 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccC-----CCHHHHHHHHHHHHH
Confidence 344666655443334445667778888777654322222211110 155666665543 267778777766544
Q ss_pred cCCceeEEEEeCCCCCCcC--CCCHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPSNPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 196 ~~~~~~~i~l~~P~NPtG~--~~~~~~l~~i~~ 226 (483)
.-.++..||.+-...+.+. -.+.+++++..+
T Consensus 82 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (248)
T 2pnf_A 82 LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLK 114 (248)
T ss_dssp HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHh
Confidence 4345675554322222221 235555555544
No 327
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=48.36 E-value=96 Score=27.66 Aligned_cols=104 Identities=14% Similarity=0.112 Sum_probs=55.0
Q ss_pred CCCcEEEeCChhHHH-HHHHHHhcCCCCeEEEeCCCCcChHHHHh---hhcCcEEEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAH-ETVAFCLADPGDAFLVPTPYYPGFDRDLR---WRTGVQLVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 118 ~~~~i~it~G~~~al-~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~---~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
+...++||.|+..+| ..+...|.+.|..|++..-.-........ ...+.++..+..|- -|.+.+++.+++.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~ 95 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDV-----TSTEAVDALITQT 95 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCC-----CCHHHHHHHHHHH
Confidence 344677776642222 33445667788888776544332222222 22234666666553 2577777777665
Q ss_pred HhcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 194 QESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
.++..++..+| +|.. .+.+. -.+.+++++..+.
T Consensus 96 ~~~~g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~ 131 (266)
T 3o38_A 96 VEKAGRLDVLV-NNAGLGGQTPVVDMTDEEWDRVLNV 131 (266)
T ss_dssp HHHHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHhCCCcEEE-ECCCcCCCCCcccCCHHHHHHHHHH
Confidence 44434666544 4442 22222 2466677666654
No 328
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=48.20 E-value=1.3e+02 Score=25.78 Aligned_cols=92 Identities=10% Similarity=-0.016 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEE-EeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCC
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIV-MSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDS 175 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~-it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~ 175 (483)
+.|++.+.+...+ ++ . ++- ...+-.+++..+-. + +.|..|++..- +....++...+..++.++..
T Consensus 14 ~~l~~~~~~i~~e-~~------~-~i~i~~~~l~~~v~~a~~-~-~~~~dVIISRG---gta~~lr~~~~iPVV~I~~s- 79 (196)
T 2q5c_A 14 ENLLNLFPKLALE-KN------F-IPITKTASLTRASKIAFG-L-QDEVDAIISRG---ATSDYIKKSVSIPSISIKVT- 79 (196)
T ss_dssp HHHHHHHHHHHHH-HT------C-EEEEEECCHHHHHHHHHH-H-TTTCSEEEEEH---HHHHHHHTTCSSCEEEECCC-
T ss_pred HHHHHHHHHHHhh-hC------C-ceEEEECCHHHHHHHHHH-h-cCCCeEEEECC---hHHHHHHHhCCCCEEEEcCC-
Confidence 5566655544442 11 1 433 44555667776655 4 66755776652 23344444458889988854
Q ss_pred CCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCC
Q 011570 176 SNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNP 211 (483)
Q Consensus 176 ~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NP 211 (483)
.-++.+++..++..+. +.-++..++-+
T Consensus 80 -------~~Dil~al~~a~~~~~--kIavvg~~~~~ 106 (196)
T 2q5c_A 80 -------RFDTMRAVYNAKRFGN--ELALIAYKHSI 106 (196)
T ss_dssp -------HHHHHHHHHHHGGGCS--EEEEEEESSCS
T ss_pred -------HhHHHHHHHHHHhhCC--cEEEEeCcchh
Confidence 4556677776655543 44466655543
No 329
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=48.12 E-value=1.4e+02 Score=26.07 Aligned_cols=102 Identities=16% Similarity=0.209 Sum_probs=51.5
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH---hhh--cCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL---RWR--TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~---~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
..++||.|+...=..+...|.+.|..|++..-.-....... ... ....++.+.++. -|.+.+++.++...
T Consensus 15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~-----~~~~~~~~~~~~~~ 89 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLEN-----ATAQQYRELAARVE 89 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTT-----CCHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEecccc-----CCHHHHHHHHHHHH
Confidence 34566555443333445667788888877655433322222 222 123444444432 35677777666554
Q ss_pred hcCCceeEEEEeCCC--CCCcC--CCCHHHHHHHHHH
Q 011570 195 ESNIRIKGVLITNPS--NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~--NPtG~--~~~~~~l~~i~~~ 227 (483)
+...++..+| +|.. .+.+. -.+.+++++..+.
T Consensus 90 ~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~ 125 (247)
T 3i1j_A 90 HEFGRLDGLL-HNASIIGPRTPLEQLPDEDFMQVMHV 125 (247)
T ss_dssp HHHSCCSEEE-ECCCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred HhCCCCCEEE-ECCccCCCCCCcccCCHHHHHHHHHH
Confidence 4333566554 4432 23222 2466677666654
No 330
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=48.11 E-value=43 Score=30.57 Aligned_cols=83 Identities=20% Similarity=0.185 Sum_probs=48.6
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..++-.
T Consensus 5 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 78 (281)
T 3zv4_A 5 GEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-GGNAVGVVGDV-----RSLQDQKRAAERCLAAFG 78 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-BTTEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-CCcEEEEEcCC-----CCHHHHHHHHHHHHHhcC
Confidence 345666666554334455677788988887765544344444443 66676666653 256777777766544434
Q ss_pred ceeEEEEeCC
Q 011570 199 RIKGVLITNP 208 (483)
Q Consensus 199 ~~~~i~l~~P 208 (483)
++.. +++|.
T Consensus 79 ~iD~-lvnnA 87 (281)
T 3zv4_A 79 KIDT-LIPNA 87 (281)
T ss_dssp CCCE-EECCC
T ss_pred CCCE-EEECC
Confidence 5664 44444
No 331
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=48.10 E-value=1.5e+02 Score=26.55 Aligned_cols=100 Identities=22% Similarity=0.243 Sum_probs=52.0
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
..++||.|+...=..+...|.+.|..|++..-.-..... .+... |.++..+..|- -|.+.+++++++..+.
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 96 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-GVEADGRTCDV-----RSVPEIEALVAAVVER 96 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 356666555433344556677788877765433222221 12222 55666666543 2577777777655444
Q ss_pred CCceeEEEEeCCC-CCCcC--CCCHHHHHHHHH
Q 011570 197 NIRIKGVLITNPS-NPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 197 ~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~ 226 (483)
-.++..+| +|.. .+.+. -.+.++++++.+
T Consensus 97 ~g~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (277)
T 2rhc_B 97 YGPVDVLV-NNAGRPGGGATAELADELWLDVVE 128 (277)
T ss_dssp TCSCSEEE-ECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred hCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 34566544 4442 22221 246666666655
No 332
>1i2a_A 50S ribosomal protein L1P; primary rRNA-binding protein, translation repressor, ribosome; 1.85A {Methanocaldococcus jannaschii} SCOP: e.24.1.1 PDB: 1cjs_A 1u63_A 1dwu_A
Probab=48.06 E-value=31 Score=30.61 Aligned_cols=58 Identities=14% Similarity=0.198 Sum_probs=39.9
Q ss_pred CCCEEEEEecc--CCHHHHHHHHHHHHHHHHHhhhccCccchhhccccccceecccccccccccCCCCCCCCcccccC
Q 011570 407 NPGWFRVCFAN--MDDRTMEIALSRITSFMLKNVEAKVPNKKKLCWQRSLRLSMSSRRMDDFMASPCMSPQSPLVQAR 482 (483)
Q Consensus 407 ~~~~iRis~~~--~~~e~l~~~l~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (483)
..+.+.+.+|. .+++++.+=+.++-+.+.+. ++.+|+++-.++|+| -|+|--|+++.+
T Consensus 156 k~~~i~v~VG~~~~~~e~L~eNi~a~i~~l~~~--------~p~~~~~ik~v~lks----------Tmgp~i~iy~~~ 215 (219)
T 1i2a_A 156 DKPYFQVLVGNEKMTDEQIVDNIEAVLNVVAKK--------YEKGLYHIKDAYVKL----------TMGPAVKVKKEK 215 (219)
T ss_dssp TSSEEEEEEEETTSCHHHHHHHHHHHHHHHHHH--------STTGGGGEEEEEEEE----------TTSCCEECC---
T ss_pred CCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHh--------CCccccceEEEEEEC----------CCCCCEEeEhhh
Confidence 34567777765 47777766666665555544 344689999999999 899988888754
No 333
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=47.70 E-value=1.1e+02 Score=27.11 Aligned_cols=100 Identities=20% Similarity=0.171 Sum_probs=50.7
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcC--hHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPG--FDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~--~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
.++||.|+...=..+...|.+.|..|++..-.-.. .... +... |.++..+..|- -|.+.+++.+++..+
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 77 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA-DQKAVFVGLDV-----TDKANFDSAIDEAAE 77 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc-CCcEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 35666555433334446677778877765433222 1222 2222 55666666553 256777777665443
Q ss_pred cCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 196 ~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
+-.++..+ ++|.. .+.+. -.+.++++++.+.
T Consensus 78 ~~g~iD~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 111 (258)
T 3a28_C 78 KLGGFDVL-VNNAGIAQIKPLLEVTEEDLKQIYSV 111 (258)
T ss_dssp HHTCCCEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HhCCCCEE-EECCCCCCCCChhhCCHHHHHHHHHh
Confidence 32356644 44442 22222 2466666666653
No 334
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=47.43 E-value=1.6e+02 Score=26.51 Aligned_cols=102 Identities=17% Similarity=0.086 Sum_probs=53.5
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
+...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|-. |.+.+++.++...
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~-----~~~~~~~~~~~~~ 105 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS-GGTAQELAGDLS-----EAGAGTDLIERAE 105 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT-TCCEEEEECCTT-----STTHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEecCC-----CHHHHHHHHHHHH
Confidence 344566655554333445566778898887765433332222 2232 666666665532 4555666555544
Q ss_pred hcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 195 ESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
+. .++..+| +|.. .+.+. -.+.+++++..+.
T Consensus 106 ~~-g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~v 139 (275)
T 4imr_A 106 AI-APVDILV-INASAQINATLSALTPNDLAFQLAV 139 (275)
T ss_dssp HH-SCCCEEE-ECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred Hh-CCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 44 3566544 4442 22222 2466777766653
No 335
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=46.99 E-value=1.5e+02 Score=26.33 Aligned_cols=102 Identities=20% Similarity=0.260 Sum_probs=51.7
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh--c--CcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR--T--GVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~--G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
..++||.|+...=..+...|.+.|..|++..-.-.......... . +.++..+..|- -|.+.+++.+++..+
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~ 88 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV-----SDEAQVEAYVTATTE 88 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 45666655544334455667778888776543322222221111 1 45566666543 256777777765444
Q ss_pred cCCceeEEEEeCCC-CCC-cC--CCCHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPS-NPL-GT--FLDRETLKDIVSF 227 (483)
Q Consensus 196 ~~~~~~~i~l~~P~-NPt-G~--~~~~~~l~~i~~~ 227 (483)
+-.++..+ ++|.. .+. +. -.+.++++++.+.
T Consensus 89 ~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~~ 123 (267)
T 1iy8_A 89 RFGRIDGF-FNNAGIEGKQNPTESFTAAEFDKVVSI 123 (267)
T ss_dssp HHSCCSEE-EECCCCCCCCBCGGGSCHHHHHHHHHH
T ss_pred HcCCCCEE-EECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 33356644 44442 111 21 2466666666553
No 336
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=46.88 E-value=1.1e+02 Score=27.20 Aligned_cols=102 Identities=16% Similarity=0.147 Sum_probs=51.8
Q ss_pred CCCcEEEeCCh-hHHHH-HHHHHhcCCCCeEEEeCCCCcC---hHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHH
Q 011570 118 DPDRIVMSGGA-TGAHE-TVAFCLADPGDAFLVPTPYYPG---FDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEK 192 (483)
Q Consensus 118 ~~~~i~it~G~-~~al~-~~~~~l~~~gd~Vlv~~P~y~~---~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~ 192 (483)
+...++||.|+ +.+|- .+...|.+.|..|++..-.-.. ........ + ++..+..|- -|.+.+++.+++
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~Dv-----~~~~~v~~~~~~ 85 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF-G-SELVFPCDV-----ADDAQIDALFAS 85 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT-T-CCCEEECCT-----TCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc-C-CcEEEECCC-----CCHHHHHHHHHH
Confidence 44567777664 13333 3446677788877766433111 11112222 2 344444442 257777777776
Q ss_pred HHhcCCceeEEEEeCCC-CCC----cC---CCCHHHHHHHHHH
Q 011570 193 AQESNIRIKGVLITNPS-NPL----GT---FLDRETLKDIVSF 227 (483)
Q Consensus 193 ~~~~~~~~~~i~l~~P~-NPt----G~---~~~~~~l~~i~~~ 227 (483)
..++..++..+| +|.. .+. +. -.+.+++++..+.
T Consensus 86 ~~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (271)
T 3ek2_A 86 LKTHWDSLDGLV-HSIGFAPREAIAGDFLDGLTRENFRIAHDI 127 (271)
T ss_dssp HHHHCSCEEEEE-ECCCCCCGGGGSSCTTTTCCHHHHHHHHHH
T ss_pred HHHHcCCCCEEE-ECCccCccccccCccccccCHHHHHHHHhh
Confidence 655544666544 4442 221 22 2566666666553
No 337
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=46.71 E-value=1.2e+02 Score=26.94 Aligned_cols=101 Identities=9% Similarity=0.083 Sum_probs=51.4
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhh---h-cC-cEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRW---R-TG-VQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~---~-~G-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
..++||.|+...=..+...|.+.|..|++..-.-......... . .+ .++..++.|- -|.+.+++.+++..
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 82 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI-----TDCTKADTEIKDIH 82 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccC-----CCHHHHHHHHHHHH
Confidence 3466665554333444566777888887765443333222221 1 02 4455555543 25677777776654
Q ss_pred hcCCceeEEEEeCCC-CCCc-CCCCHHHHHHHHH
Q 011570 195 ESNIRIKGVLITNPS-NPLG-TFLDRETLKDIVS 226 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~-NPtG-~~~~~~~l~~i~~ 226 (483)
++..++..+| +|.. ...+ .-.+.+++++..+
T Consensus 83 ~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~ 115 (250)
T 3nyw_A 83 QKYGAVDILV-NAAAMFMDGSLSEPVDNFRKIME 115 (250)
T ss_dssp HHHCCEEEEE-ECCCCCCCCCCSCHHHHHHHHHH
T ss_pred HhcCCCCEEE-ECCCcCCCCCCCCCHHHHHHHHH
Confidence 4434666544 4442 2222 2345555655555
No 338
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=45.74 E-value=1.7e+02 Score=26.24 Aligned_cols=100 Identities=14% Similarity=0.222 Sum_probs=49.6
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|..|++..-.-...........+ +..+..|- -|.+.+++.+++..++-.
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 81 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG--AVFILCDV-----TQEDDVKTLVSETIRRFG 81 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTT--EEEEECCT-----TSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--CeEEEcCC-----CCHHHHHHHHHHHHHHcC
Confidence 34566766555433455566778888877764332222222222213 33444432 256777777665433323
Q ss_pred ceeEEEEeCCC-C-CCcC--CCCHHHHHHHHH
Q 011570 199 RIKGVLITNPS-N-PLGT--FLDRETLKDIVS 226 (483)
Q Consensus 199 ~~~~i~l~~P~-N-PtG~--~~~~~~l~~i~~ 226 (483)
++..+| +|.. . +.+. -.+.++++++.+
T Consensus 82 ~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (270)
T 1yde_A 82 RLDCVV-NNAGHHPPPQRPEETSAQGFRQLLE 112 (270)
T ss_dssp CCCEEE-ECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCCCcccCCHHHHHHHHH
Confidence 566544 4442 1 2221 235566666555
No 339
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=45.50 E-value=1.3e+02 Score=26.00 Aligned_cols=99 Identities=12% Similarity=0.042 Sum_probs=46.6
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
.++||.|+...=..+...|.+.|..|++..-.-...........+..++..++ -|.+.+++.++...+.-.++
T Consensus 7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~~~~~~~~i 79 (234)
T 2ehd_A 7 AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDV-------REEGDWARAVAAMEEAFGEL 79 (234)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCT-------TCHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecC-------CCHHHHHHHHHHHHHHcCCC
Confidence 45665554433334456677788887765433222222222221334433332 25677777666543332356
Q ss_pred eEEEEeCCCCCCcC--CCCHHHHHHHHH
Q 011570 201 KGVLITNPSNPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 201 ~~i~l~~P~NPtG~--~~~~~~l~~i~~ 226 (483)
..++.+--..+.+. -.+.+++++..+
T Consensus 80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~ 107 (234)
T 2ehd_A 80 SALVNNAGVGVMKPVHELTLEEWRLVLD 107 (234)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 65544322222221 235566655554
No 340
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=45.33 E-value=1.7e+02 Score=26.20 Aligned_cols=101 Identities=15% Similarity=0.212 Sum_probs=53.8
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEe-CCCCcChH---HHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVP-TPYYPGFD---RDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~P~y~~~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
..++||.|+...=..+...|.+.|..|++. ...-.... ..+... |.++..+..|- -|.+.+++.+++..+
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 101 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA-GGKALTAQADV-----SDPAAVRRLFATAEE 101 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 356666555533344456677888887764 32222222 222333 66777776653 257777777766544
Q ss_pred cCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 196 ~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
.-.++..+ ++|.. .+.+. -.+.++++++.+.
T Consensus 102 ~~g~iD~l-vnnAG~~~~~~~~~~~~~~~~~~~~v 135 (267)
T 3u5t_A 102 AFGGVDVL-VNNAGIMPLTTIAETGDAVFDRVIAV 135 (267)
T ss_dssp HHSCEEEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 43466644 44442 22222 2456666666553
No 341
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=44.98 E-value=54 Score=29.96 Aligned_cols=79 Identities=15% Similarity=0.100 Sum_probs=46.2
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++. .
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl-----~d~~~v~~~~~~~----~ 85 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-AGQVEVRELDL-----QDLSSVRRFADGV----S 85 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-SSEEEEEECCT-----TCHHHHHHHHHTC----C
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-cCCeeEEEcCC-----CCHHHHHHHHHhc----C
Confidence 345666666554334455667788988887765443344444443 66777777653 2677787777642 2
Q ss_pred ceeEEEEeCC
Q 011570 199 RIKGVLITNP 208 (483)
Q Consensus 199 ~~~~i~l~~P 208 (483)
++..+ ++|.
T Consensus 86 ~iD~l-v~nA 94 (291)
T 3rd5_A 86 GADVL-INNA 94 (291)
T ss_dssp CEEEE-EECC
T ss_pred CCCEE-EECC
Confidence 45544 4444
No 342
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=44.90 E-value=1.8e+02 Score=26.36 Aligned_cols=102 Identities=13% Similarity=0.237 Sum_probs=51.5
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh-------cCcEEEEeecCCCCCcccCHHHHHHHHH
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR-------TGVQLVPVVCDSSNDFKVTMEALEAAYE 191 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-------~G~~~~~v~~~~~~~~~~d~~~l~~~i~ 191 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......... .+.++..+..|- -|.+.+++.++
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 92 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI-----RNEEEVNNLVK 92 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCC-----CCHHHHHHHHH
Confidence 345677655544334455667778888777643322222221111 145566666543 25677777776
Q ss_pred HHHhcCCceeEEEEeCCC-CCCc--CCCCHHHHHHHHH
Q 011570 192 KAQESNIRIKGVLITNPS-NPLG--TFLDRETLKDIVS 226 (483)
Q Consensus 192 ~~~~~~~~~~~i~l~~P~-NPtG--~~~~~~~l~~i~~ 226 (483)
...+.-.++..|| +|.. .+.+ .-.+.+++++..+
T Consensus 93 ~~~~~~g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~ 129 (303)
T 1yxm_A 93 STLDTFGKINFLV-NNGGGQFLSPAEHISSKGWHAVLE 129 (303)
T ss_dssp HHHHHHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHcCCCCEEE-ECCCCCCCCchhhCCHHHHHHHHH
Confidence 5433323566554 4432 2222 1245566665554
No 343
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=44.89 E-value=1.8e+02 Score=26.42 Aligned_cols=103 Identities=14% Similarity=0.182 Sum_probs=52.9
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
....++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.++++++...
T Consensus 33 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 106 (291)
T 3cxt_A 33 KGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAA-GINAHGYVCDV-----TDEDGIQAMVAQIE 106 (291)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-TCCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEecC-----CCHHHHHHHHHHHH
Confidence 334566666554433445566778888877654332222221 2222 54555555442 25777777776654
Q ss_pred hcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 195 ESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
+.-.++..+| +|.. .+.+. -.+.++++++.+.
T Consensus 107 ~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~v 141 (291)
T 3cxt_A 107 SEVGIIDILV-NNAGIIRRVPMIEMTAAQFRQVIDI 141 (291)
T ss_dssp HHTCCCCEEE-ECCCCCCCCCGGGSCHHHHHHHHHH
T ss_pred HHcCCCcEEE-ECCCcCCCCCcccCCHHHHHHHHHH
Confidence 4434566544 4442 22221 2366666666553
No 344
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=44.84 E-value=1.6e+02 Score=26.86 Aligned_cols=102 Identities=14% Similarity=0.102 Sum_probs=55.6
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCc-C----hHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYP-G----FDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~-~----~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
...++||.|+...=..+...|.+.|..|++..-.-. . ....+... |.++..+..|- -|.+.+++.+++.
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~ 122 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC-GRKAVLLPGDL-----SDESFARSLVHKA 122 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT-TCCEEECCCCT-----TSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc-CCcEEEEEecC-----CCHHHHHHHHHHH
Confidence 345666666554334455667888988877543311 1 11222333 67777776653 2567777777655
Q ss_pred HhcCCceeEEEEeCCCC--CCc--CCCCHHHHHHHHHH
Q 011570 194 QESNIRIKGVLITNPSN--PLG--TFLDRETLKDIVSF 227 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P~N--PtG--~~~~~~~l~~i~~~ 227 (483)
.++-.++..++ +|... +.+ .-++.+++++..+.
T Consensus 123 ~~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~~v 159 (294)
T 3r3s_A 123 REALGGLDILA-LVAGKQTAIPEIKDLTSEQFQQTFAV 159 (294)
T ss_dssp HHHHTCCCEEE-ECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEE-ECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 44434566544 44432 222 23477777777664
No 345
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=44.80 E-value=1.3e+02 Score=27.78 Aligned_cols=102 Identities=15% Similarity=0.153 Sum_probs=55.3
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHH---hhhcCc--EEEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDL---RWRTGV--QLVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~---~~~~G~--~~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
...++||.|+...=..+...|.+.|..|++..-.-....... ... |. ++..+..|- -|.+.+++++...
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl-----~~~~~v~~~~~~~ 81 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAE-GSGPEVMGVQLDV-----ASREGFKMAADEV 81 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-TCGGGEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCCeEEEEECCC-----CCHHHHHHHHHHH
Confidence 345666665543334455667788988877654433322222 222 33 566666553 2577777777765
Q ss_pred HhcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 194 QESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
.....++..+ ++|.. .+.+. -.+.++++++.+.
T Consensus 82 ~~~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 117 (319)
T 3ioy_A 82 EARFGPVSIL-CNNAGVNLFQPIEESSYDDWDWLLGV 117 (319)
T ss_dssp HHHTCCEEEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHhCCCCCEE-EECCCcCCCCCcccCCHHHHHHHHHH
Confidence 5544466654 44443 22222 2366667666654
No 346
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=44.66 E-value=1.1e+02 Score=27.68 Aligned_cols=85 Identities=14% Similarity=0.040 Sum_probs=41.4
Q ss_pred cEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCC-cChHHHHhh---hcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 121 RIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYY-PGFDRDLRW---RTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 121 ~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y-~~~~~~~~~---~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
.++||.| +.+|- .+...|.+.|..|++..-.- ......... ..|.++..+..|-.+ ..-..+.+++.+++..+
T Consensus 25 ~~lVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~v~~~~~~~~~ 102 (288)
T 2x9g_A 25 AAVVTGA-AKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTN-SNVLPASCEEIINSCFR 102 (288)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSC-STTHHHHHHHHHHHHHH
T ss_pred EEEEeCC-CCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCC-ccCCHHHHHHHHHHHHH
Confidence 4555544 44554 44466777887777654333 222222211 125566666654310 00016677776665443
Q ss_pred cCCceeEEEEeCC
Q 011570 196 SNIRIKGVLITNP 208 (483)
Q Consensus 196 ~~~~~~~i~l~~P 208 (483)
.-.++..+ ++|.
T Consensus 103 ~~g~iD~l-vnnA 114 (288)
T 2x9g_A 103 AFGRCDVL-VNNA 114 (288)
T ss_dssp HHSCCCEE-EECC
T ss_pred hcCCCCEE-EECC
Confidence 33356654 4444
No 347
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=44.64 E-value=1.7e+02 Score=26.03 Aligned_cols=103 Identities=12% Similarity=0.068 Sum_probs=56.7
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCc---Ch---HHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYP---GF---DRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYE 191 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~---~~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~ 191 (483)
+...++||.|+...=..+...|.+.|..|++..-.-. .. ...+... |.++..+..|- -|.+.+++.++
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~ 83 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-GAKVALYQSDL-----SNEEEVAKLFD 83 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT-TCEEEEEECCC-----CSHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHH
Confidence 3445666666554334555778889988887532211 11 1122232 77787777653 26777777776
Q ss_pred HHHhcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 192 KAQESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 192 ~~~~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
+..++-.++..+ ++|.. .+.+. -.+.++++++.+.
T Consensus 84 ~~~~~~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~~ 121 (262)
T 3ksu_A 84 FAEKEFGKVDIA-INTVGKVLKKPIVETSEAEFDAMDTI 121 (262)
T ss_dssp HHHHHHCSEEEE-EECCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred HHHHHcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHHH
Confidence 654443456644 44442 22222 2466667666653
No 348
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=44.44 E-value=1.8e+02 Score=26.17 Aligned_cols=102 Identities=12% Similarity=0.142 Sum_probs=49.7
Q ss_pred CCcEEEeCChh-HHHH-HHHHHhcCCCCeEEEeCCCC-cChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 119 PDRIVMSGGAT-GAHE-TVAFCLADPGDAFLVPTPYY-PGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 119 ~~~i~it~G~~-~al~-~~~~~l~~~gd~Vlv~~P~y-~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
...++||.|+. .+|- .+...|.+.|..|++..-.- ......+... +.++..+..|- -|.+.+++.+++..+
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 99 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAE-FNPAAVLPCDV-----ISDQEIKDLFVELGK 99 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGG-GCCSEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHh-cCCceEEEeec-----CCHHHHHHHHHHHHH
Confidence 34566666442 2233 34456677787777654332 1111222222 22344444442 256777777776555
Q ss_pred cCCceeEEEEeCCC-CCC----cCC---CCHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPS-NPL----GTF---LDRETLKDIVSF 227 (483)
Q Consensus 196 ~~~~~~~i~l~~P~-NPt----G~~---~~~~~l~~i~~~ 227 (483)
+-.++..+| +|.. .+. +.. .+.+++++..+.
T Consensus 100 ~~g~id~li-~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (280)
T 3nrc_A 100 VWDGLDAIV-HSIAFAPRDQLEGNFIDCVTREGFSIAHDI 138 (280)
T ss_dssp HCSSCCEEE-ECCCCCCGGGSSSCHHHHCCHHHHHHHHHH
T ss_pred HcCCCCEEE-ECCccCCCcccCCccccccCHHHHHHHHHH
Confidence 444667554 4442 222 111 555666665553
No 349
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=43.99 E-value=1.8e+02 Score=26.16 Aligned_cols=101 Identities=11% Similarity=0.098 Sum_probs=53.0
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
..++||.|+...=..+...|.+.|..|++..-.-...... ++.. |.++..+..|- -|.+.+++++++..+.
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-----~d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-GYESSGYAGDV-----SKKEEISEVINKILTE 118 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-TCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-CCceeEEECCC-----CCHHHHHHHHHHHHHh
Confidence 3566665554433445567788898887754221111111 2222 55666666543 2677788777665444
Q ss_pred CCceeEEEEeCCCCCCcC--CCCHHHHHHHHH
Q 011570 197 NIRIKGVLITNPSNPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 197 ~~~~~~i~l~~P~NPtG~--~~~~~~l~~i~~ 226 (483)
..++..||.+--..+.+. -.+.+++++..+
T Consensus 119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 150 (285)
T 2c07_A 119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLR 150 (285)
T ss_dssp CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 345665544322222222 245666666555
No 350
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=43.79 E-value=1.4e+02 Score=26.00 Aligned_cols=101 Identities=13% Similarity=0.091 Sum_probs=49.4
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh---cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR---TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~---~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
.++||.|+...=..+...|.+.|..|++..-.-.......... .+.++..+..|- -|.+.+++++++..+..
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 78 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV-----ADEGDVNAAIAATMEQF 78 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHHHHh
Confidence 4566655543333455667778877776654322222222111 144555555542 25677777776544433
Q ss_pred CceeEEEEeCCCCCCcC-----CCCHHHHHHHHH
Q 011570 198 IRIKGVLITNPSNPLGT-----FLDRETLKDIVS 226 (483)
Q Consensus 198 ~~~~~i~l~~P~NPtG~-----~~~~~~l~~i~~ 226 (483)
.++..|+.+--..+.+. -.+.+++++..+
T Consensus 79 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 112 (250)
T 2cfc_A 79 GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMA 112 (250)
T ss_dssp SCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHH
Confidence 35665544322222121 235556665554
No 351
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=43.38 E-value=1.7e+02 Score=25.67 Aligned_cols=103 Identities=18% Similarity=0.186 Sum_probs=52.5
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
+...++||.|+...=..+...|.+.|..|++..-.-..... .++.. +.++..+..|- -|.+.+++++++..
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 85 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME-GHDVSSVVMDV-----TNTESVQNAVRSVH 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEecC-----CCHHHHHHHHHHHH
Confidence 33457776555443344556677788888776543222211 22222 55566666543 25677777776544
Q ss_pred hcCCceeEEEEeCCCCC-CcC--CCCHHHHHHHHH
Q 011570 195 ESNIRIKGVLITNPSNP-LGT--FLDRETLKDIVS 226 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~NP-tG~--~~~~~~l~~i~~ 226 (483)
++..++..||.+--..+ .+. -.+.+++.+..+
T Consensus 86 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 120 (260)
T 3awd_A 86 EQEGRVDILVACAGICISEVKAEDMTDGQWLKQVD 120 (260)
T ss_dssp HHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 33335665554432221 222 235555555554
No 352
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=42.99 E-value=1.9e+02 Score=26.03 Aligned_cols=102 Identities=11% Similarity=0.102 Sum_probs=52.1
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh--cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR--TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......... .| ++..+..|- -|.+.+++++++..+.
T Consensus 29 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 102 (276)
T 2b4q_A 29 GRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADL-----SSEAGARRLAQALGEL 102 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCT-----TSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeC-----CCHHHHHHHHHHHHHh
Confidence 345666655543334445667778888877654332222222221 13 555555442 2577777777665444
Q ss_pred CCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 197 NIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 197 ~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
-.++..+| +|.. ...+. -.+.++++++.+.
T Consensus 103 ~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~v 135 (276)
T 2b4q_A 103 SARLDILV-NNAGTSWGAALESYPVSGWEKVMQL 135 (276)
T ss_dssp CSCCSEEE-ECCCCCCCCCTTSCCSHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 34566544 4442 22222 2355566665553
No 353
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=42.95 E-value=1.7e+02 Score=25.59 Aligned_cols=99 Identities=12% Similarity=0.170 Sum_probs=50.8
Q ss_pred cEEEeCChhHHHH-HHHHHhcCCCCeEEEeCC-CCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 121 RIVMSGGATGAHE-TVAFCLADPGDAFLVPTP-YYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 121 ~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P-~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
.++||.| +.+|- .+...|.+.|..|++..- .-..... .+... |.++..+..|- -|.+.+++.+++..+
T Consensus 6 ~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 78 (246)
T 2uvd_A 6 VALVTGA-SRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL-GSDAIAVRADV-----ANAEDVTNMVKQTVD 78 (246)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred EEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 4555544 44444 444667778888776543 2221212 12222 55666666543 256777777765444
Q ss_pred cCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 196 ~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
+-.++..+| +|.. .+.+. -.+.++++++.+.
T Consensus 79 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (246)
T 2uvd_A 79 VFGQVDILV-NNAGVTKDNLLMRMKEEEWDTVINT 112 (246)
T ss_dssp HHSCCCEEE-ECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 333566544 4442 22222 2466666666653
No 354
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=42.92 E-value=1.8e+02 Score=25.69 Aligned_cols=99 Identities=17% Similarity=0.213 Sum_probs=50.8
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCc-ChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYP-GFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~-~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
.++||.|+...=..+...|.+.|..|++..-.-. .....+... |.++..+..|- -|.+.+++++++..++-.+
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~ 79 (255)
T 2q2v_A 6 TALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARH-GVKAVHHPADL-----SDVAQIEALFALAEREFGG 79 (255)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTT-SCCEEEECCCT-----TSHHHHHHHHHHHHHHHSS
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhc-CCceEEEeCCC-----CCHHHHHHHHHHHHHHcCC
Confidence 4566555443334445667778888776543221 112222222 55666666543 2567777777654443235
Q ss_pred eeEEEEeCCC-CCCcC--CCCHHHHHHHHH
Q 011570 200 IKGVLITNPS-NPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 200 ~~~i~l~~P~-NPtG~--~~~~~~l~~i~~ 226 (483)
+..+| +|.. .+.+. -.+.++++++.+
T Consensus 80 id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (255)
T 2q2v_A 80 VDILV-NNAGIQHVAPVEQFPLESWDKIIA 108 (255)
T ss_dssp CSEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 66544 4432 22221 246666666655
No 355
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=42.32 E-value=1.8e+02 Score=25.65 Aligned_cols=96 Identities=10% Similarity=-0.062 Sum_probs=51.2
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCC-hhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecC
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGG-ATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCD 174 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G-~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~ 174 (483)
++.|++.+.+...+ ++ ...+|.+..| -.+++..+-..+-..|..|++..- +....++...+..++.++..
T Consensus 21 ~~~L~~~~~~i~~e-~~-----~~~~I~vi~~~le~av~~a~~~~~~~~~dVIISRG---gta~~Lr~~~~iPVV~I~vs 91 (225)
T 2pju_A 21 VTRLFELFRDISLE-FD-----HLANITPIQLGFEKAVTYIRKKLANERCDAIIAAG---SNGAYLKSRLSVPVILIKPS 91 (225)
T ss_dssp CHHHHHHHHHHHTT-TT-----TTCEEEEECCCHHHHHHHHHHHTTTSCCSEEEEEH---HHHHHHHTTCSSCEEEECCC
T ss_pred hHHHHHHHHHHHHh-hC-----CCceEEEecCcHHHHHHHHHHHHhcCCCeEEEeCC---hHHHHHHhhCCCCEEEecCC
Confidence 46677744444332 11 1134555544 556777665544333444666642 23344444458888888854
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCC
Q 011570 175 SSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSN 210 (483)
Q Consensus 175 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~N 210 (483)
.-++..++..++..+. +.-++..++-
T Consensus 92 --------~~Dil~aL~~a~~~~~--kIavVg~~~~ 117 (225)
T 2pju_A 92 --------GYDVLQFLAKAGKLTS--SIGVVTYQET 117 (225)
T ss_dssp --------HHHHHHHHHHTTCTTS--CEEEEEESSC
T ss_pred --------HHHHHHHHHHHHhhCC--cEEEEeCchh
Confidence 4456677766554433 4445555553
No 356
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=41.64 E-value=1.7e+02 Score=26.76 Aligned_cols=97 Identities=29% Similarity=0.310 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCCh---hHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeec
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGA---TGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~ 173 (483)
.+-|..+.+...+..+ ..--|+++.|+ .+++..+-.+---.-|.|++..|.|...
T Consensus 52 ~~Er~~v~~~~~~~~~-----gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~----------------- 109 (289)
T 2yxg_A 52 HEEHKKVIEKVVDVVN-----GRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKP----------------- 109 (289)
T ss_dssp HHHHHHHHHHHHHHHT-----TSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCC-----------------
T ss_pred HHHHHHHHHHHHHHhC-----CCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-----------------
Confidence 4445555555443321 12347777775 4555555433222348899999988532
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHH
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIV 225 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~ 225 (483)
+.+.+.+..+...+. .+...+++++|.. ||..++.+.+.+|+
T Consensus 110 --------s~~~l~~~f~~ia~a-~~lPiilYn~P~~-tg~~l~~~~~~~La 151 (289)
T 2yxg_A 110 --------TQEGLRKHFGKVAES-INLPIVLYNVPSR-TAVNLEPKTVKLLA 151 (289)
T ss_dssp --------CHHHHHHHHHHHHHH-CSSCEEEEECHHH-HSCCCCHHHHHHHH
T ss_pred --------CHHHHHHHHHHHHHh-cCCCEEEEeCccc-cCcCCCHHHHHHHH
Confidence 112222222211111 1456788888875 89999988877776
No 357
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=41.62 E-value=1.8e+02 Score=25.83 Aligned_cols=101 Identities=16% Similarity=0.129 Sum_probs=51.5
Q ss_pred cEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcC-hHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 121 RIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPG-FDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 121 ~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~-~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
.+++.+|++.+|- .+...|.+.|..|++..-.-.. .... ... .+.++..+..|- -|.+.+++.+++..+
T Consensus 26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 99 (269)
T 3gk3_A 26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERD-AGRDFKAYAVDV-----ADFESCERCAEKVLA 99 (269)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHT-TTCCCEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh-cCCceEEEEecC-----CCHHHHHHHHHHHHH
Confidence 4444455555554 4456778889887766422221 1111 122 255566666543 256777777765544
Q ss_pred cCCceeEEEEeCCCCCCcC--CCCHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPSNPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 196 ~~~~~~~i~l~~P~NPtG~--~~~~~~l~~i~~~ 227 (483)
.-.++..+|.+--....+. -.+.++++++.+.
T Consensus 100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 133 (269)
T 3gk3_A 100 DFGKVDVLINNAGITRDATFMKMTKGDWDAVMRT 133 (269)
T ss_dssp HHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHH
Confidence 4335665443322222222 2466667666553
No 358
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=40.35 E-value=1.2e+02 Score=27.01 Aligned_cols=100 Identities=16% Similarity=0.219 Sum_probs=55.7
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEE-E--eCCC------C-----cChHHHHhhhcCcEEEEeecCCCCCcccCHHHH
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFL-V--PTPY------Y-----PGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEAL 186 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vl-v--~~P~------y-----~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l 186 (483)
-+++.+|+......+..+. +.|..|. + ..|. | ......++.+ |+++..+++.... .--.++|
T Consensus 7 vvvl~SGGkDSs~al~~l~-~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~L-GIpl~~v~~~g~~--~~e~e~l 82 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAI-KNRFSVKFLVTMVSENEESYMYHTINANLTDLQARAL-GIPLVKGFTQGEK--EKEVEDL 82 (237)
T ss_dssp EEEECCSSHHHHHHHHHHH-HTTCEEEEEEEEECC--------CCSSSHHHHHHHHH-TCCEEEEEC--------CHHHH
T ss_pred EEEEecCcHHHHHHHHHHH-HcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHc-CCCEEEEECCCCc--hHHHHHH
Confidence 3566688777776665544 4565443 2 1111 1 1123345555 9988877765321 1235666
Q ss_pred HHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEE
Q 011570 187 EAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLV 236 (483)
Q Consensus 187 ~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI 236 (483)
.+++++. .+.+++ +|.+.+..++..+-+.|.+.|+..+
T Consensus 83 ~~~l~~~-----~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 83 KRVLSGL-----KIQGIV-------AGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp HHHHTTS-----CCSEEE-------CC---CCSHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhc-----CCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEE
Confidence 6666532 455555 6999988889999999999887543
No 359
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=40.08 E-value=2.1e+02 Score=26.34 Aligned_cols=108 Identities=17% Similarity=0.184 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCCh---hHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeec
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGA---TGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~ 173 (483)
.+-|..+.+..-+..+ ..--|+++.|+ .+++..+-.+---.-|.|++..|.|...
T Consensus 64 ~eEr~~v~~~~~~~~~-----grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~----------------- 121 (301)
T 1xky_A 64 SEEKVALYRHVVSVVD-----KRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYNKP----------------- 121 (301)
T ss_dssp HHHHHHHHHHHHHHHT-----TSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCC-----------------
T ss_pred HHHHHHHHHHHHHHhC-----CCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-----------------
Confidence 3445555555443321 12247777775 4565555444322338899999988432
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcc
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDE 239 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~De 239 (483)
+.+.+.+..+...+. .+..++++++|. .||..++.+.+.+|++ -.++.=|=|.
T Consensus 122 --------s~~~l~~~f~~va~a-~~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnIvgiKds 174 (301)
T 1xky_A 122 --------SQEGMYQHFKAIAES-TPLPVMLYNVPG-RSIVQISVDTVVRLSE---IENIVAIKDA 174 (301)
T ss_dssp --------CHHHHHHHHHHHHHT-CSSCEEEEECHH-HHSSCCCHHHHHHHHT---STTEEEEEEC
T ss_pred --------CHHHHHHHHHHHHHh-cCCCEEEEeCcc-ccCCCCCHHHHHHHHc---CCCEEEEEcC
Confidence 112222222221111 245677888887 4899999888777753 2344444443
No 360
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=39.84 E-value=2.2e+02 Score=26.05 Aligned_cols=97 Identities=20% Similarity=0.221 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCCh---hHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeec
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGA---TGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~ 173 (483)
.+-|..+.+..-+..+ ..--|+++.|+ .+++..+-.+---.-|.|++..|.|...
T Consensus 52 ~~Er~~v~~~~~~~~~-----grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~----------------- 109 (294)
T 2ehh_A 52 FEEHEKVIEFAVKRAA-----GRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNKP----------------- 109 (294)
T ss_dssp HHHHHHHHHHHHHHHT-----TSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCC-----------------
T ss_pred HHHHHHHHHHHHHHhC-----CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-----------------
Confidence 3445555555443321 12247777775 4565555444322348899999988532
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHH
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIV 225 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~ 225 (483)
+.+.+.+..+...+. .+..++++++|.. ||..++.+.+.+|+
T Consensus 110 --------s~~~l~~~f~~va~a-~~lPiilYn~P~~-tg~~l~~~~~~~La 151 (294)
T 2ehh_A 110 --------TQRGLYEHFKTVAQE-VDIPIIIYNIPSR-TCVEISVDTMFKLA 151 (294)
T ss_dssp --------CHHHHHHHHHHHHHH-CCSCEEEEECHHH-HSCCCCHHHHHHHH
T ss_pred --------CHHHHHHHHHHHHHh-cCCCEEEEeCCcc-cCcCCCHHHHHHHH
Confidence 112222222211111 1456778888874 89999988877776
No 361
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=39.81 E-value=2.2e+02 Score=26.04 Aligned_cols=79 Identities=20% Similarity=0.284 Sum_probs=45.7
Q ss_pred cEEEeCCh---hHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 121 RIVMSGGA---TGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 121 ~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
-|+++.|+ .+++..+-.+---.-|.|++..|.|... +.+.+.+..+...+.
T Consensus 71 pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-------------------------s~~~l~~~f~~ia~a- 124 (292)
T 2vc6_A 71 PVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKP-------------------------TQEGIYQHFKAIDAA- 124 (292)
T ss_dssp CBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-------------------------CHHHHHHHHHHHHHH-
T ss_pred cEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-------------------------CHHHHHHHHHHHHHh-
Confidence 47777765 4565555444333348899999988532 112222222111111
Q ss_pred CceeEEEEeCCCCCCcCCCCHHHHHHHHH
Q 011570 198 IRIKGVLITNPSNPLGTFLDRETLKDIVS 226 (483)
Q Consensus 198 ~~~~~i~l~~P~NPtG~~~~~~~l~~i~~ 226 (483)
.+...+++++|. .||..++.+.+.+|++
T Consensus 125 ~~lPiilYn~P~-~tg~~l~~~~~~~La~ 152 (292)
T 2vc6_A 125 STIPIIVYNIPG-RSAIEIHVETLARIFE 152 (292)
T ss_dssp CSSCEEEEECHH-HHSCCCCHHHHHHHHH
T ss_pred CCCCEEEEeCcc-ccCcCCCHHHHHHHHh
Confidence 145677888777 4899999887777753
No 362
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=39.81 E-value=2.1e+02 Score=25.66 Aligned_cols=104 Identities=16% Similarity=0.228 Sum_probs=55.5
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh--cCc---EEEEeecCCCCCcccCHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR--TGV---QLVPVVCDSSNDFKVTMEALEAAYEK 192 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~G~---~~~~v~~~~~~~~~~d~~~l~~~i~~ 192 (483)
+...++||.|+...=..+...|.+.|..|++..-.-.......... .+. ++..+..|- -|.+.+++++++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~ 84 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDI-----TNEDETARAVDA 84 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCT-----TSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCC-----CCHHHHHHHHHH
Confidence 3345666666554334455667788988877654332222222211 133 666666553 257777777766
Q ss_pred HHhcCCceeEEEEeCCC--CCCcC--CCCHHHHHHHHHH
Q 011570 193 AQESNIRIKGVLITNPS--NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 193 ~~~~~~~~~~i~l~~P~--NPtG~--~~~~~~l~~i~~~ 227 (483)
..++..++..++ +|.. .+.+. -.+.++++++.+.
T Consensus 85 ~~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~v 122 (281)
T 3svt_A 85 VTAWHGRLHGVV-HCAGGSENIGPITQVDSEAWRRTVDL 122 (281)
T ss_dssp HHHHHSCCCEEE-ECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCCEEE-ECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 544434566444 4442 22222 3466667666654
No 363
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=39.20 E-value=2.1e+02 Score=25.48 Aligned_cols=100 Identities=15% Similarity=0.156 Sum_probs=52.5
Q ss_pred cEEEeCChhHHHH-HHHHHhcCCCCeEEEe-CCCCcChH---HHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 121 RIVMSGGATGAHE-TVAFCLADPGDAFLVP-TPYYPGFD---RDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 121 ~i~it~G~~~al~-~~~~~l~~~gd~Vlv~-~P~y~~~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
.+++.+|++.+|- .+...|.+.|..|++. ...-.... ..+... +.++..+..|- -|.+.+++.+++..+
T Consensus 27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 100 (272)
T 4e3z_A 27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES-GGEAVAIPGDV-----GNAADIAAMFSAVDR 100 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 3444455555554 4446677888887654 33222221 223333 67777777653 256777777766544
Q ss_pred cCCceeEEEEeCCC-CCC-cC--CCCHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPS-NPL-GT--FLDRETLKDIVSF 227 (483)
Q Consensus 196 ~~~~~~~i~l~~P~-NPt-G~--~~~~~~l~~i~~~ 227 (483)
+-.++..+| +|.. ... +. -.+.+++++..+.
T Consensus 101 ~~g~id~li-~nAg~~~~~~~~~~~~~~~~~~~~~~ 135 (272)
T 4e3z_A 101 QFGRLDGLV-NNAGIVDYPQRVDEMSVERIERMLRV 135 (272)
T ss_dssp HHSCCCEEE-ECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred hCCCCCEEE-ECCCCCCCCCChhhCCHHHHHHHHhh
Confidence 433566544 4442 111 21 2366666666653
No 364
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=39.11 E-value=1.5e+02 Score=27.50 Aligned_cols=98 Identities=16% Similarity=0.181 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCCh---hHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeec
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGA---TGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~ 173 (483)
.+-|..+.+..-+..+ ..--|+++.|+ .+++..+-.+---.-|.|++..|.|..... ...
T Consensus 63 ~eEr~~v~~~~~~~~~-----grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~--~~l---------- 125 (303)
T 2wkj_A 63 LSEREQVLEIVAEEAK-----GKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSF--EEH---------- 125 (303)
T ss_dssp HHHHHHHHHHHHHHHT-----TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCH--HHH----------
T ss_pred HHHHHHHHHHHHHHhC-----CCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCH--HHH----------
Confidence 3445555555443321 12347777775 455555543322234889999998853210 000
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCc-eeEEEEeCCCCCCcCCCCHHHHHHHHH
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIR-IKGVLITNPSNPLGTFLDRETLKDIVS 226 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~-~~~i~l~~P~NPtG~~~~~~~l~~i~~ 226 (483)
.+.+++..+. . + ..++++++|. .||..++.+.+.+|++
T Consensus 126 ---------~~~f~~va~a----~-~~lPiilYn~P~-~tg~~l~~~~~~~La~ 164 (303)
T 2wkj_A 126 ---------CDHYRAIIDS----A-DGLPMVVYNIPA-LSGVKLTLDQINTLVT 164 (303)
T ss_dssp ---------HHHHHHHHHH----H-TTCCEEEEECHH-HHCCCCCHHHHHHHHT
T ss_pred ---------HHHHHHHHHh----C-CCCCEEEEeCcc-ccCCCCCHHHHHHHhc
Confidence 1122222211 1 3 5678888887 5899999887777754
No 365
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=38.93 E-value=2.1e+02 Score=25.36 Aligned_cols=102 Identities=16% Similarity=0.246 Sum_probs=52.4
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.+.+..+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 80 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-GVEARSYVCDV-----TSEEAVIGTVDSVVR 80 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TSCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 34566666555433445566778888777654332222221 2222 55666666553 256777776665443
Q ss_pred cCCceeEEEEeCCC-C-CCcC--CCCHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPS-N-PLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 196 ~~~~~~~i~l~~P~-N-PtG~--~~~~~~l~~i~~~ 227 (483)
.-.++..+| +|.. . +.+. -.+.++++++.+.
T Consensus 81 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~ 115 (262)
T 1zem_A 81 DFGKIDFLF-NNAGYQGAFAPVQDYPSDDFARVLTI 115 (262)
T ss_dssp HHSCCCEEE-ECCCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred HhCCCCEEE-ECCCCCCCCCccccCCHHHHHHHHHH
Confidence 323566544 4432 2 2222 2466666666553
No 366
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=38.47 E-value=82 Score=27.40 Aligned_cols=97 Identities=13% Similarity=0.140 Sum_probs=51.7
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
.++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+.+.. ...
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~---~~~ 73 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-SNNVGYRARDL-----ASHQEVEQLFEQLD---SIP 73 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-SSCCCEEECCT-----TCHHHHHHHHHSCS---SCC
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-hhccCeEeecC-----CCHHHHHHHHHHHh---hcC
Confidence 3666666554334455667788887877765444333444433 55555555442 25677777765421 122
Q ss_pred eEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 201 KGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 201 ~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
. ++++|.. .+.+. -.+.+++++..+.
T Consensus 74 d-~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 102 (230)
T 3guy_A 74 S-TVVHSAGSGYFGLLQEQDPEQIQTLIEN 102 (230)
T ss_dssp S-EEEECCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred C-EEEEeCCcCCCCccccCCHHHHHHHHHH
Confidence 3 4455543 22232 2466667666654
No 367
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=38.42 E-value=2.2e+02 Score=25.62 Aligned_cols=101 Identities=15% Similarity=0.111 Sum_probs=54.4
Q ss_pred CcEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHHHHhhh--cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 120 DRIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDRDLRWR--TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 120 ~~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
..++||.| +.+|- .+...|.+.|..|++..-.-.......... .|.++..+..|- -|.+.+++.++...++
T Consensus 9 k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 9 KIAIVTGA-SSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDV-----GDEALHEALVELAVRR 82 (280)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 34555544 44444 444667788988887665433322222221 256676666553 2567777777655443
Q ss_pred CCceeEEEEeCCC--CCCcC--CCCHHHHHHHHHH
Q 011570 197 NIRIKGVLITNPS--NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 197 ~~~~~~i~l~~P~--NPtG~--~~~~~~l~~i~~~ 227 (483)
-.++..+ ++|.. .+.+. -.+.+++++..+.
T Consensus 83 ~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~~v 116 (280)
T 3tox_A 83 FGGLDTA-FNNAGALGAMGEISSLSVEGWRETLDT 116 (280)
T ss_dssp HSCCCEE-EECCCCCCSCSCGGGCCHHHHHHHHHH
T ss_pred cCCCCEE-EECCCCCCCCCChhhCCHHHHHHHHHH
Confidence 3356644 44442 12222 3466777776664
No 368
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=37.52 E-value=1.6e+02 Score=26.32 Aligned_cols=81 Identities=11% Similarity=0.117 Sum_probs=40.4
Q ss_pred cEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHHHHhhh-----cCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 121 RIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDRDLRWR-----TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 121 ~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-----~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
.++|| |++.+|- .+...|.+.|..|++..-.-.......... .+.++..+..|- -|.+.+++++++..
T Consensus 8 ~vlVT-Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~ 81 (278)
T 1spx_A 8 VAIIT-GSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV-----TTDAGQDEILSTTL 81 (278)
T ss_dssp EEEET-TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred EEEEe-CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEeccc-----CCHHHHHHHHHHHH
Confidence 45555 4444544 444667778888776643322222211111 134455555542 25677777766543
Q ss_pred hcCCceeEEEEeCC
Q 011570 195 ESNIRIKGVLITNP 208 (483)
Q Consensus 195 ~~~~~~~~i~l~~P 208 (483)
++-.++..+| +|.
T Consensus 82 ~~~g~id~lv-~~A 94 (278)
T 1spx_A 82 GKFGKLDILV-NNA 94 (278)
T ss_dssp HHHSCCCEEE-ECC
T ss_pred HHcCCCCEEE-ECC
Confidence 3323566444 444
No 369
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=37.52 E-value=2.2e+02 Score=25.90 Aligned_cols=101 Identities=14% Similarity=0.187 Sum_probs=51.0
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCc---EEEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGV---QLVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
..++||.|+...=..+...|.+.|..|++..-.-...... +... |. ++..+..|- -|.+.+++++++.
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 100 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA-GVPAEKINAVVADV-----TEASGQDDIINTT 100 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCGGGEEEEECCT-----TSHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCCCceEEEEecCC-----CCHHHHHHHHHHH
Confidence 3456655544333445566778888887765432222222 2222 43 555555543 2567777777654
Q ss_pred HhcCCceeEEEEeCCC-CCCcC----CCCHHHHHHHHHH
Q 011570 194 QESNIRIKGVLITNPS-NPLGT----FLDRETLKDIVSF 227 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P~-NPtG~----~~~~~~l~~i~~~ 227 (483)
.++-.++..+| +|.. .+.+. -.+.+++++..+.
T Consensus 101 ~~~~g~iD~lv-nnAG~~~~~~~~~~~~~~~~~~~~~~v 138 (297)
T 1xhl_A 101 LAKFGKIDILV-NNAGANLADGTANTDQPVELYQKTFKL 138 (297)
T ss_dssp HHHHSCCCEEE-ECCCCCCCCSCCGGGSCHHHHHHHHHH
T ss_pred HHhcCCCCEEE-ECCCcCcCCCCccccCCHHHHHHHHhH
Confidence 43323566544 4442 22222 2466666666653
No 370
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=37.51 E-value=2.1e+02 Score=25.07 Aligned_cols=101 Identities=16% Similarity=0.186 Sum_probs=50.9
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhh---hcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRW---RTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~---~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
..++||.|+...=..+...|.+.|..|++..-.-......... ..+.++..+..|- -|.+.+++.++.....
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 89 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDV-----SNTDIVTKTIQQIDAD 89 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeC-----CCHHHHHHHHHHHHHh
Confidence 3566665554333445566777887776654322222221111 1255566665543 2577777777665444
Q ss_pred CCceeEEEEeCCC-CCCcC--CCCHHHHHHHHH
Q 011570 197 NIRIKGVLITNPS-NPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 197 ~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~ 226 (483)
-.++..++ ++.. ...+. -.+.+++++..+
T Consensus 90 ~~~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (265)
T 1h5q_A 90 LGPISGLI-ANAGVSVVKPATELTHEDFAFVYD 121 (265)
T ss_dssp SCSEEEEE-ECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred cCCCCEEE-ECCCcCCCCchhhCCHHHHHHHHh
Confidence 34566544 4432 22221 246666665554
No 371
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=37.38 E-value=2.2e+02 Score=25.44 Aligned_cols=102 Identities=15% Similarity=0.205 Sum_probs=50.1
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh--cCc---EEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR--TGV---QLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~G~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
..++||.|+...=..+...|.+.|..|++..-.-.......... .|. ++..+..|- -|.+.+++++++..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 81 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV-----TTEDGQDQIINSTL 81 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecC-----CCHHHHHHHHHHHH
Confidence 34556555443333445667778888777643322222222111 133 555555543 25677777776544
Q ss_pred hcCCceeEEEEeCCC-CCCcC------CCCHHHHHHHHHH
Q 011570 195 ESNIRIKGVLITNPS-NPLGT------FLDRETLKDIVSF 227 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~-NPtG~------~~~~~~l~~i~~~ 227 (483)
++-.++..+| +|.. .+.+. -.+.+++++..+.
T Consensus 82 ~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (280)
T 1xkq_A 82 KQFGKIDVLV-NNAGAAIPDAFGTTGTDQGIDIYHKTLKL 120 (280)
T ss_dssp HHHSCCCEEE-ECCCCCCCCTTCCCGGGSCHHHHHHHHHH
T ss_pred HhcCCCCEEE-ECCCCCCCCCCCcccccCCHHHHHHHHHH
Confidence 3323566544 4442 21121 2455666666553
No 372
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=37.26 E-value=2.2e+02 Score=25.32 Aligned_cols=102 Identities=14% Similarity=0.145 Sum_probs=53.9
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.++++++....
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 94 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-GLNVEGSVCDL-----LSRTERDKLMQTVAH 94 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHHH
Confidence 34566666655433455566778888877664432222222 2222 55666666543 256777777765544
Q ss_pred cC-CceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 196 SN-IRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 196 ~~-~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
.- .++..+| +|.. .+.+. -.+.++++++.+.
T Consensus 95 ~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 129 (273)
T 1ae1_A 95 VFDGKLNILV-NNAGVVIHKEAKDFTEKDYNIIMGT 129 (273)
T ss_dssp HTTSCCCEEE-ECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HcCCCCcEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 32 3566544 4442 22222 2466677666653
No 373
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=37.01 E-value=2.1e+02 Score=26.14 Aligned_cols=78 Identities=26% Similarity=0.318 Sum_probs=45.7
Q ss_pred cEEEeCCh---hHHHHHHHHHhcCCC-CeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 121 RIVMSGGA---TGAHETVAFCLADPG-DAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 121 ~i~it~G~---~~al~~~~~~l~~~g-d~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
-|+++.|+ .+++..+-.+ .+-| |.|++..|.|... +.+.+.+..+...+.
T Consensus 72 pviaGvg~~~t~~ai~la~~a-~~~Gadavlv~~P~y~~~-------------------------s~~~l~~~f~~ia~a 125 (292)
T 2ojp_A 72 PVIAGTGANATAEAISLTQRF-NDSGIVGCLTVTPYYNRP-------------------------SQEGLYQHFKAIAEH 125 (292)
T ss_dssp CEEEECCCSSHHHHHHHHHHT-TTSSCSEEEEECCCSSCC-------------------------CHHHHHHHHHHHHTT
T ss_pred cEEEecCCccHHHHHHHHHHH-HhcCCCEEEECCCCCCCC-------------------------CHHHHHHHHHHHHHh
Confidence 48887776 3555444333 3444 8899999988532 112222222221111
Q ss_pred CCceeEEEEeCCCCCCcCCCCHHHHHHHHH
Q 011570 197 NIRIKGVLITNPSNPLGTFLDRETLKDIVS 226 (483)
Q Consensus 197 ~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~ 226 (483)
.+...+++++|. .||..++.+.+.+|++
T Consensus 126 -~~lPiilYn~P~-~tg~~l~~~~~~~La~ 153 (292)
T 2ojp_A 126 -TDLPQILYNVPS-RTGCDLLPETVGRLAK 153 (292)
T ss_dssp -CSSCEEEECCHH-HHSCCCCHHHHHHHHT
T ss_pred -cCCCEEEEeCcc-hhccCCCHHHHHHHHc
Confidence 245677877777 4899999887777753
No 374
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=36.58 E-value=1.5e+02 Score=27.41 Aligned_cols=56 Identities=5% Similarity=0.086 Sum_probs=39.7
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc---CcEEE
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK---NIHLV 236 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~---~~~iI 236 (483)
+..+|.+.+++.++...+. .+..|+++ -++=-+..++.+|..++++.+.+. .+.||
T Consensus 31 dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi 89 (304)
T 3cpr_A 31 SGDIDIAAGREVAAYLVDK--GLDSLVLA-GTTGESPTTTAAEKLELLKAVREEVGDRAKLI 89 (304)
T ss_dssp TSCBCHHHHHHHHHHHHHT--TCCEEEES-STTTTTTTSCHHHHHHHHHHHHHHHTTTSEEE
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 4589999999988876554 46666654 344445668999999999988763 35554
No 375
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=36.50 E-value=1e+02 Score=27.10 Aligned_cols=80 Identities=13% Similarity=0.127 Sum_probs=42.5
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
....|+||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++.
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~---- 82 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-KDNYTIEVCNL-----ANKEECSNLISKT---- 82 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CSSEEEEECCT-----TSHHHHHHHHHTC----
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-ccCccEEEcCC-----CCHHHHHHHHHhc----
Confidence 3345666655544333445667788988887765444333433333 44444444432 2567777766532
Q ss_pred CceeEEEEeCC
Q 011570 198 IRIKGVLITNP 208 (483)
Q Consensus 198 ~~~~~i~l~~P 208 (483)
.++..++ +|.
T Consensus 83 ~~id~li-~~A 92 (249)
T 3f9i_A 83 SNLDILV-CNA 92 (249)
T ss_dssp SCCSEEE-ECC
T ss_pred CCCCEEE-ECC
Confidence 2456444 444
No 376
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=36.43 E-value=2.3e+02 Score=25.23 Aligned_cols=102 Identities=15% Similarity=0.145 Sum_probs=50.3
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcC--cEEEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTG--VQLVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G--~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
...++||.|+...=..+...|.+.|..|++..-.-...... ++.. | .++..+..|- -|.+.+++++++.
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl-----~~~~~v~~~~~~~ 105 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA-GYPGTLIPYRCDL-----SNEEDILSMFSAI 105 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCSSEEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhc-CCCceEEEEEecC-----CCHHHHHHHHHHH
Confidence 34566665544333445566777888877664332222221 2221 3 4555555543 2567777766654
Q ss_pred HhcCCceeEEEEeCCCCCCcC--CCCHHHHHHHHH
Q 011570 194 QESNIRIKGVLITNPSNPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P~NPtG~--~~~~~~l~~i~~ 226 (483)
...-.++..||.+-...+.+. -.+.++++++.+
T Consensus 106 ~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 140 (279)
T 1xg5_A 106 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFN 140 (279)
T ss_dssp HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 333235665554322222222 235566665554
No 377
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=36.40 E-value=2e+02 Score=28.97 Aligned_cols=104 Identities=24% Similarity=0.287 Sum_probs=56.9
Q ss_pred cCCCcEEEeCChhHHHHHHH-HHhcCCCCe-EEEe-CCC----------------CcChHHHHhhhcCcEEEEeecCCCC
Q 011570 117 FDPDRIVMSGGATGAHETVA-FCLADPGDA-FLVP-TPY----------------YPGFDRDLRWRTGVQLVPVVCDSSN 177 (483)
Q Consensus 117 ~~~~~i~it~G~~~al~~~~-~~l~~~gd~-Vlv~-~P~----------------y~~~~~~~~~~~G~~~~~v~~~~~~ 177 (483)
+.++.+++.+|++.+|-..+ ..|.+.|.. |++. .-. -......+... |.++..+..|-
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~v~~~~~Dv-- 324 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL-GATATVVTCDL-- 324 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH-TCEEEEEECCT--
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc-CCEEEEEECCC--
Confidence 44556666666666665444 556666754 4443 222 11222334444 88888887764
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcC--CCCHHHHHHHHHH
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~--~~~~~~l~~i~~~ 227 (483)
-|.+.+++.+.... +..++..||-+---...+. -++.++++++++.
T Consensus 325 ---td~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~ 372 (525)
T 3qp9_A 325 ---TDAEAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTA 372 (525)
T ss_dssp ---TSHHHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHH
Confidence 36788888887644 2335665543322222232 3466777776654
No 378
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=36.13 E-value=1.3e+02 Score=27.89 Aligned_cols=57 Identities=5% Similarity=0.074 Sum_probs=39.5
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc---CcEEEE
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK---NIHLVC 237 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~---~~~iI~ 237 (483)
+..+|.+.+++.++...+. .+..|+++ -++=-+..++.+|+.++++.+.+. .+.||.
T Consensus 30 dg~iD~~~l~~lv~~li~~--Gv~gi~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 30 DGSLDTATAARLANHLVDQ--GCDGLVVS-GTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp TSCBCHHHHHHHHHHHHHT--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 4579999999988766554 45666554 344445668999999999887663 455555
No 379
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=35.99 E-value=2.3e+02 Score=25.00 Aligned_cols=101 Identities=16% Similarity=0.161 Sum_probs=48.3
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCC-CCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTP-YYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P-~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
..++||.|+...=..+...|.+.|..|++..- .-..... .+... |.++..+..|- -|.+.+++++++...
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-GAQGVAIQADI-----SKPSEVVALFDKAVS 95 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-CCcEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 34666555443323455667778877776543 2211111 12222 55666666543 256777777665433
Q ss_pred cCCceeEEEEeCCCCCCcC--CCCHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPSNPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 196 ~~~~~~~i~l~~P~NPtG~--~~~~~~l~~i~~ 226 (483)
+-.++..|+.+-...+.+. -.+.+++++..+
T Consensus 96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (274)
T 1ja9_A 96 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFN 128 (274)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCcccccCCHHHHHHHHH
Confidence 3235665443322222221 235555555544
No 380
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=35.93 E-value=1.1e+02 Score=27.18 Aligned_cols=98 Identities=13% Similarity=0.099 Sum_probs=50.0
Q ss_pred EEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 122 IVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 122 i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
++|| |++.+|- .+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..++-.++
T Consensus 3 vlVT-Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~i 75 (248)
T 3asu_A 3 VLVT-GATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-GDNLYIAQLDV-----RNRAAIEEMLASLPAEWCNI 75 (248)
T ss_dssp EEET-TTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCT-----TCHHHHHHHHHTSCTTTCCC
T ss_pred EEEE-CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cCceEEEEcCC-----CCHHHHHHHHHHHHHhCCCC
Confidence 4555 4444443 344667778888777643322222333333 44555555543 25777877776543332356
Q ss_pred eEEEEeCCCC--CCc--CCCCHHHHHHHHHH
Q 011570 201 KGVLITNPSN--PLG--TFLDRETLKDIVSF 227 (483)
Q Consensus 201 ~~i~l~~P~N--PtG--~~~~~~~l~~i~~~ 227 (483)
.. +++|..- +.+ .-.+.+++++..+.
T Consensus 76 D~-lvnnAg~~~~~~~~~~~~~~~~~~~~~~ 105 (248)
T 3asu_A 76 DI-LVNNAGLALGMEPAHKASVEDWETMIDT 105 (248)
T ss_dssp CE-EEECCCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred CE-EEECCCcCCCCCchhhCCHHHHHHHHHH
Confidence 64 4444421 112 22466666666653
No 381
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=35.83 E-value=2.3e+02 Score=25.10 Aligned_cols=94 Identities=13% Similarity=0.205 Sum_probs=48.5
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|..|++..-.-.. . .++..+..++ -|.+.+++++++..++-.
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~-~~~~~~~~Dl-------~~~~~v~~~~~~~~~~~g 73 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------E-AKYDHIECDV-------TNPDQVKASIDHIFKEYG 73 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------S-CSSEEEECCT-------TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------C-CceEEEEecC-------CCHHHHHHHHHHHHHHcC
Confidence 3457777665544445556777888877765322111 1 1344443332 256777777665443323
Q ss_pred ceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 199 RIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 199 ~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
++..+| +|.. .+.+. -.+.++++++.+.
T Consensus 74 ~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~ 104 (264)
T 2dtx_A 74 SISVLV-NNAGIESYGKIESMSMGEWRRIIDV 104 (264)
T ss_dssp CCCEEE-ECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 566554 4442 22232 2366666666653
No 382
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=35.79 E-value=93 Score=27.65 Aligned_cols=97 Identities=18% Similarity=0.141 Sum_probs=51.4
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
..++||.|+...=..+...|.+.|..|++..-. ........ +.++..+..|- -|.+.++++++...+. .+
T Consensus 10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~-g~ 79 (257)
T 3tl3_A 10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADL-GDRARFAAADV-----TDEAAVASALDLAETM-GT 79 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS---CHHHHHHT-CTTEEEEECCT-----TCHHHHHHHHHHHHHH-SC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc---hHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHHHh-CC
Confidence 345666554433334556677888877766432 22334443 66666666553 2567777766554332 35
Q ss_pred eeEEEEeCCC-CCCcC------CCCHHHHHHHHHH
Q 011570 200 IKGVLITNPS-NPLGT------FLDRETLKDIVSF 227 (483)
Q Consensus 200 ~~~i~l~~P~-NPtG~------~~~~~~l~~i~~~ 227 (483)
+..+ ++|.. .+.+. ..+.++++++.+.
T Consensus 80 id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 113 (257)
T 3tl3_A 80 LRIV-VNCAGTGNAIRVLSRDGVFSLAAFRKIVDI 113 (257)
T ss_dssp EEEE-EECGGGSHHHHHHHHTCCCSHHHHHHHHHH
T ss_pred CCEE-EECCCCCCCcccccccccCCHHHHHHHHHH
Confidence 6644 44432 11111 1566777766654
No 383
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=35.39 E-value=1.8e+02 Score=26.71 Aligned_cols=79 Identities=18% Similarity=0.255 Sum_probs=46.4
Q ss_pred cEEEeCCh---hHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 121 RIVMSGGA---TGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 121 ~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
-|+++.|+ .+++..+-.+---.-|.|++..|.|... +.+.+.+..+...+.
T Consensus 71 pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-------------------------s~~~l~~~f~~va~a- 124 (297)
T 2rfg_A 71 PVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRP-------------------------SQEGLYQHFKMVHDA- 124 (297)
T ss_dssp CBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTTCC-------------------------CHHHHHHHHHHHHHH-
T ss_pred eEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-------------------------CHHHHHHHHHHHHHh-
Confidence 47777775 4565555443322348899999988532 112222222211111
Q ss_pred CceeEEEEeCCCCCCcCCCCHHHHHHHHH
Q 011570 198 IRIKGVLITNPSNPLGTFLDRETLKDIVS 226 (483)
Q Consensus 198 ~~~~~i~l~~P~NPtG~~~~~~~l~~i~~ 226 (483)
.+..++++++|.. ||..++.+.+.+|++
T Consensus 125 ~~lPiilYn~P~~-tg~~l~~~~~~~La~ 152 (297)
T 2rfg_A 125 IDIPIIVYNIPPR-AVVDIKPETMARLAA 152 (297)
T ss_dssp CSSCEEEEECHHH-HSCCCCHHHHHHHHT
T ss_pred cCCCEEEEeCccc-cCCCCCHHHHHHHHc
Confidence 1456788888875 899999888777764
No 384
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=35.30 E-value=2.3e+02 Score=24.84 Aligned_cols=102 Identities=14% Similarity=0.150 Sum_probs=48.0
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhh--cC-------cEEEEeecCCCCCcccCHHHHHHH
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWR--TG-------VQLVPVVCDSSNDFKVTMEALEAA 189 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~--~G-------~~~~~v~~~~~~~~~~d~~~l~~~ 189 (483)
...++||.|+...=..+...|.+.|..|++..-.-.......... .| .++..+..|- -|.+.+++.
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~ 81 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADV-----SEARAARCL 81 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCT-----TSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecC-----CCHHHHHHH
Confidence 345677655554334455667778887777654322222222211 02 2333444332 256777777
Q ss_pred HHHHHhcCCce-eEEEEeCCC-CCCcC--CCCHHHHHHHHH
Q 011570 190 YEKAQESNIRI-KGVLITNPS-NPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 190 i~~~~~~~~~~-~~i~l~~P~-NPtG~--~~~~~~l~~i~~ 226 (483)
++.....-.++ ..| +++.. .+.+. -.+.+++++..+
T Consensus 82 ~~~~~~~~g~i~d~v-i~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (264)
T 2pd6_A 82 LEQVQACFSRPPSVV-VSCAGITQDEFLLHMSEDDWDKVIA 121 (264)
T ss_dssp HHHHHHHHSSCCSEE-EECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHHHHhCCCCeEE-EECCCcCCCcchhhCCHHHHHHHHh
Confidence 66543322234 544 44442 22221 235566655554
No 385
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=34.40 E-value=2.4e+02 Score=24.89 Aligned_cols=101 Identities=15% Similarity=0.085 Sum_probs=49.4
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhc-CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRT-GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~-G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
..++||.|+...=..+...|.+.|..|++..-.-........... ..++..+..|- -|.+.+++++++..+...
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~ 91 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDV-----TKDEDVRNLVDTTIAKHG 91 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCC-----CCHHHHHHHHHHHHHHcC
Confidence 457777665543344556677788887776433222222222221 11444455442 256777777665433323
Q ss_pred ceeEEEEeCCCCC---Cc--CCCCHHHHHHHHH
Q 011570 199 RIKGVLITNPSNP---LG--TFLDRETLKDIVS 226 (483)
Q Consensus 199 ~~~~i~l~~P~NP---tG--~~~~~~~l~~i~~ 226 (483)
++..+| +|.... .+ .-.+.+++++..+
T Consensus 92 ~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~~ 123 (278)
T 2bgk_A 92 KLDIMF-GNVGVLSTTPYSILEAGNEDFKRVMD 123 (278)
T ss_dssp CCCEEE-ECCCCCCSSCSSTTTCCHHHHHHHHH
T ss_pred CCCEEE-ECCcccCCCCCChhhCCHHHHHHHHH
Confidence 566554 333211 11 1245566666555
No 386
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=34.33 E-value=1.8e+02 Score=27.35 Aligned_cols=90 Identities=18% Similarity=0.158 Sum_probs=49.8
Q ss_pred cEEEeCCh---hHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 121 RIVMSGGA---TGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 121 ~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
-|+++.|+ .+++..+-.+---.-|.|++..|.|... +.+.+.+..+...+.
T Consensus 105 pViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~-------------------------s~~~l~~~f~~VA~a- 158 (332)
T 2r8w_A 105 TLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSYTPL-------------------------TQEEAYHHFAAVAGA- 158 (332)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCSSCC-------------------------CHHHHHHHHHHHHHH-
T ss_pred cEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-------------------------CHHHHHHHHHHHHHh-
Confidence 47776665 4555555433222338888888888431 112222222221111
Q ss_pred CceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccc
Q 011570 198 IRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEI 240 (483)
Q Consensus 198 ~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Dea 240 (483)
.+..++++++|.. ||..++.+.+.+|++ -.++.=|=|..
T Consensus 159 ~~lPiilYn~P~~-tg~~l~~e~~~~La~---~pnIvgiKdss 197 (332)
T 2r8w_A 159 TALPLAIYNNPTT-TRFTFSDELLVRLAY---IPNIRAIKMPL 197 (332)
T ss_dssp CSSCEEEECCHHH-HCCCCCHHHHHHHHT---STTEEEEEECC
T ss_pred cCCCEEEEeCccc-cCcCCCHHHHHHHHc---CCCEEEEEeCC
Confidence 1456778887875 899999888877764 23444344433
No 387
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=34.21 E-value=61 Score=26.71 Aligned_cols=59 Identities=17% Similarity=0.176 Sum_probs=38.1
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHH-HHHHHHH-HHhhcCc-EEEEccccc
Q 011570 179 FKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRE-TLKDIVS-FINEKNI-HLVCDEIYA 242 (483)
Q Consensus 179 ~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~-~l~~i~~-~a~~~~~-~iI~Deay~ 242 (483)
...+.+.|.+.++++ ++..|++--|-|.-|..-... ..+.++. ++.+.++ ++++||.|.
T Consensus 40 ~~~~~~~l~~li~~~-----~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 40 GDYGLSRLSELIKDY-----TIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp TBCCHHHHHHHHTTS-----EEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred hHHHHHHHHHHHHHc-----CCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 446788898888764 889999999976666653222 2345553 3334454 456688874
No 388
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=34.09 E-value=2.5e+02 Score=24.86 Aligned_cols=101 Identities=16% Similarity=0.138 Sum_probs=51.5
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEe-CCCCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVP-TPYYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~P~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
..++||.|+...=..+...|.+.|..|++. ...-..... .+... +.++..+..|- -|.+.+++.+++..+
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~ 100 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN-GGNGRLLSFDV-----ANREQCREVLEHEIA 100 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-CCceEEEEecC-----CCHHHHHHHHHHHHH
Confidence 345555554433344556677889887553 222221222 22222 55666666543 256777777765544
Q ss_pred cCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 196 ~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
+..++..+| +|.. ...+. -.+.+++++..+.
T Consensus 101 ~~g~id~li-~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (267)
T 4iiu_A 101 QHGAWYGVV-SNAGIARDAAFPALSNDDWDAVIHT 134 (267)
T ss_dssp HHCCCSEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HhCCccEEE-ECCCCCCCCccccCCHHHHHHHHHH
Confidence 434566544 4442 22222 2466667666653
No 389
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=33.89 E-value=2.4e+02 Score=24.55 Aligned_cols=102 Identities=13% Similarity=0.148 Sum_probs=50.9
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
...++||.|+...=..+...|.+.|..|++..-.-..... .+... +.++..+..|- -|.+.++++++...+
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 84 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GGQAFACRCDI-----TSEQELSALADFAIS 84 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh-CCceEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 3456665544433334556677888887766543222111 12222 55565555542 256777777765433
Q ss_pred cCCceeEEEEeCCCCCCc-CCCCHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPSNPLG-TFLDRETLKDIVS 226 (483)
Q Consensus 196 ~~~~~~~i~l~~P~NPtG-~~~~~~~l~~i~~ 226 (483)
+..++..||.+--..+.+ .-.+.+++++..+
T Consensus 85 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~ 116 (255)
T 1fmc_A 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYE 116 (255)
T ss_dssp HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 333567555442222111 1345566655554
No 390
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=33.74 E-value=1.6e+02 Score=23.75 Aligned_cols=103 Identities=17% Similarity=0.050 Sum_probs=60.7
Q ss_pred cEEEeCCh--hHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 121 RIVMSGGA--TGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 121 ~i~it~G~--~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
.++++-+- ...+.-+...|.+-|-+++.+.-+. ..++.. |+++..+.--.+++-.-+...+.+.|++ .
T Consensus 26 gvliSv~d~dK~~l~~~a~~l~~lGf~i~AT~GTa----~~L~~~-Gi~v~~v~k~~egg~~~~~~~i~d~i~~-----g 95 (143)
T 2yvq_A 26 GILIGIQQSFRPRFLGVAEQLHNEGFKLFATEATS----DWLNAN-NVPATPVAWPSQEGQNPSLSSIRKLIRD-----G 95 (143)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHTTTCEEEEEHHHH----HHHHHT-TCCCEEECCGGGC-----CBCHHHHHHT-----T
T ss_pred CEEEEecccchHHHHHHHHHHHHCCCEEEECchHH----HHHHHc-CCeEEEEEeccCCCcccccccHHHHHHC-----C
Confidence 37887665 4556566677777888887776443 344554 8888777632222100000135555553 3
Q ss_pred ceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEE
Q 011570 199 RIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVC 237 (483)
Q Consensus 199 ~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~ 237 (483)
++.+|+ +.|.. . --+..+-..|.+.|-+|+++++.
T Consensus 96 ~i~lVI-nt~~~-~--~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 96 SIDLVI-NLPNN-N--TKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp SCCEEE-ECCCC-C--GGGHHHHHHHHHHHHHTTCCEEC
T ss_pred CceEEE-ECCCC-C--CcCCccHHHHHHHHHHhCCCeEc
Confidence 676544 44532 1 12367788899999999998764
No 391
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=33.72 E-value=2.1e+02 Score=25.18 Aligned_cols=99 Identities=13% Similarity=0.138 Sum_probs=51.7
Q ss_pred EEEeCChhHHHHH-HHHHhcCC--CCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 122 IVMSGGATGAHET-VAFCLADP--GDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 122 i~it~G~~~al~~-~~~~l~~~--gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
+++.+|++.+|-. +...|.+. |..|++....-.......... |.++..+..|- -|.+.+++.+++..++..
T Consensus 4 ~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 77 (254)
T 3kzv_A 4 VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-GDRFFYVVGDI-----TEDSVLKQLVNAAVKGHG 77 (254)
T ss_dssp EEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-GGGEEEEESCT-----TSHHHHHHHHHHHHHHHS
T ss_pred EEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-CCceEEEECCC-----CCHHHHHHHHHHHHHhcC
Confidence 3444455555543 33455544 456665544433333334443 66666666553 256777777766544434
Q ss_pred ceeEEEEeCCC--CCCcC--CCCHHHHHHHHHH
Q 011570 199 RIKGVLITNPS--NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 199 ~~~~i~l~~P~--NPtG~--~~~~~~l~~i~~~ 227 (483)
++..++ +|.. .+.+. -.+.+++++..+.
T Consensus 78 ~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~~~ 109 (254)
T 3kzv_A 78 KIDSLV-ANAGVLEPVQNVNEIDVNAWKKLYDI 109 (254)
T ss_dssp CCCEEE-EECCCCCCCTTTTSCCHHHHHHHHHH
T ss_pred CccEEE-ECCcccCCCCCcccCCHHHHHHHHHH
Confidence 666544 4442 23232 3466777776664
No 392
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=33.64 E-value=2e+02 Score=25.42 Aligned_cols=100 Identities=15% Similarity=0.076 Sum_probs=50.0
Q ss_pred cEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHHHHhhh---cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 121 RIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDRDLRWR---TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 121 ~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~---~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
.++||.| +.+|- .+...|.+.|..|++..-.-.......... .+.++..+..|- -|.+.+++++++..++
T Consensus 9 ~vlVTGa-s~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 9 HALITAG-TKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADV-----TKKEDLHKIVEEAMSH 82 (264)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred EEEEeCC-CchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 4555544 44444 455667788887776532221111211111 145566666543 2577777777665444
Q ss_pred CCceeEEEEeCCC--C-CCc--CCCCHHHHHHHHHH
Q 011570 197 NIRIKGVLITNPS--N-PLG--TFLDRETLKDIVSF 227 (483)
Q Consensus 197 ~~~~~~i~l~~P~--N-PtG--~~~~~~~l~~i~~~ 227 (483)
..++..+| +|.. . +.+ .-.+.+++++..+.
T Consensus 83 ~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 117 (264)
T 3i4f_A 83 FGKIDFLI-NNAGPYVFERKKLVDYEEDEWNEMIQG 117 (264)
T ss_dssp HSCCCEEE-CCCCCCCCSCCCGGGCCHHHHHHHHHH
T ss_pred hCCCCEEE-ECCcccccCCCccccCCHHHHHHHHHh
Confidence 34566544 4443 1 111 12356666665553
No 393
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=33.57 E-value=63 Score=29.29 Aligned_cols=81 Identities=19% Similarity=0.269 Sum_probs=50.0
Q ss_pred eEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHH
Q 011570 145 AFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDI 224 (483)
Q Consensus 145 ~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i 224 (483)
.|+++...|.+-...+...... +.+|+- ..+|-+|+-.+.++-.- ...+|++. -.+++.++++++
T Consensus 81 SVLTd~~~F~Gs~~~L~~vr~~--v~lPvL-rKDFiid~yQI~eAr~~------GADaILLI------~a~L~~~~l~~l 145 (258)
T 4a29_A 81 SITTEEKYFNGSYETLRKIASS--VSIPIL-MSDFIVKESQIDDAYNL------GADTVLLI------VKILTERELESL 145 (258)
T ss_dssp EEECCSTTTCCCHHHHHHHHTT--CSSCEE-EESCCCSHHHHHHHHHH------TCSEEEEE------GGGSCHHHHHHH
T ss_pred EEeCCCCCCCCCHHHHHHHHHh--cCCCEe-eccccccHHHHHHHHHc------CCCeeehH------HhhcCHHHHHHH
Confidence 3566666676655544432111 122321 12688898777665432 44566554 456888999999
Q ss_pred HHHHhhcCcEEEEcccc
Q 011570 225 VSFINEKNIHLVCDEIY 241 (483)
Q Consensus 225 ~~~a~~~~~~iI~Deay 241 (483)
.+.|++.|+-+++ |++
T Consensus 146 ~~~A~~lGl~~Lv-EVh 161 (258)
T 4a29_A 146 LEYARSYGMEPLI-LIN 161 (258)
T ss_dssp HHHHHHTTCCCEE-EES
T ss_pred HHHHHHHhHHHHH-hcc
Confidence 9999999976666 454
No 394
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=33.57 E-value=1.8e+02 Score=27.46 Aligned_cols=77 Identities=13% Similarity=0.168 Sum_probs=45.8
Q ss_pred cEEEeCCh---hHHHHHHHHHhcCCCCeEEEeCCCCcC-hHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 121 RIVMSGGA---TGAHETVAFCLADPGDAFLVPTPYYPG-FDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 121 ~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~P~y~~-~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
-|+++.|+ .+++..+-.+---.-|.|++..|.|.. . +.+.+.+..+...+.
T Consensus 94 pViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~~-------------------------s~~~l~~~f~~IA~a 148 (344)
T 2hmc_A 94 PVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGS-------------------------VIAAQKAHFKAILSA 148 (344)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTT-------------------------CHHHHHHHHHHHHHH
T ss_pred cEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccCCCC-------------------------CHHHHHHHHHHHHhh
Confidence 47777775 455555543322233889999998854 1 112222222221110
Q ss_pred CCceeEEEEeCCCCCCcCCCCHHHHHHH
Q 011570 197 NIRIKGVLITNPSNPLGTFLDRETLKDI 224 (483)
Q Consensus 197 ~~~~~~i~l~~P~NPtG~~~~~~~l~~i 224 (483)
..+..++++++| .||..++.+.+.+|
T Consensus 149 a~~lPiilYn~P--~tg~~l~~e~~~~L 174 (344)
T 2hmc_A 149 APEIPAVIYNSP--YYGFATRADLFFAL 174 (344)
T ss_dssp STTSCEEEEEBG--GGTBCCCHHHHHHH
T ss_pred CCCCcEEEEecC--ccCCCcCHHHHHHH
Confidence 124567888999 79999998888877
No 395
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=33.50 E-value=2.9e+02 Score=25.51 Aligned_cols=93 Identities=15% Similarity=0.182 Sum_probs=50.7
Q ss_pred cEEEeCCh---hHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 121 RIVMSGGA---TGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 121 ~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
-|+++.|+ .+++..+-.+---.-|.|++..|.|... +.++.+.+.+..+...+.
T Consensus 79 pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~----------------------~~~s~~~l~~~f~~va~a- 135 (309)
T 3fkr_A 79 PVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYHGAT----------------------FRVPEAQIFEFYARVSDA- 135 (309)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCBTTT----------------------BCCCHHHHHHHHHHHHHH-
T ss_pred cEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCCccC----------------------CCCCHHHHHHHHHHHHHh-
Confidence 47777663 4555555444323348899888877210 001222233322222111
Q ss_pred CceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccc
Q 011570 198 IRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEI 240 (483)
Q Consensus 198 ~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Dea 240 (483)
.+..++++++|. ||..++.+.+.+|++-. .++.=|=||+
T Consensus 136 ~~lPiilYn~P~--tg~~l~~~~~~~La~~~--pnIvgiK~~~ 174 (309)
T 3fkr_A 136 IAIPIMVQDAPA--SGTALSAPFLARMAREI--EQVAYFXIET 174 (309)
T ss_dssp CSSCEEEEECGG--GCCCCCHHHHHHHHHHS--TTEEEEEECS
T ss_pred cCCCEEEEeCCC--CCCCCCHHHHHHHHhhC--CCEEEEECCC
Confidence 245678888894 89999977776665421 3555555454
No 396
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=33.09 E-value=1.6e+02 Score=27.27 Aligned_cols=57 Identities=12% Similarity=0.186 Sum_probs=39.9
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc---CcEEEE
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK---NIHLVC 237 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~---~~~iI~ 237 (483)
+..+|.+.+++.++...+. .+..|+++ -++=-+..++.+|..++++.+.+. .+.||.
T Consensus 26 dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 26 QQALDKASLRRLVQFNIQQ--GIDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp TSSBCHHHHHHHHHHHHHT--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4579999999988766554 46666654 334345568999999999988653 456654
No 397
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=32.94 E-value=3.5e+02 Score=26.23 Aligned_cols=82 Identities=16% Similarity=0.094 Sum_probs=44.9
Q ss_pred CcEEEeCChhHHHHHH-HHHhcC-CCCeEEEeCCCCcC---------------hHHHHhhhcCcEEEEeecCCCCCcccC
Q 011570 120 DRIVMSGGATGAHETV-AFCLAD-PGDAFLVPTPYYPG---------------FDRDLRWRTGVQLVPVVCDSSNDFKVT 182 (483)
Q Consensus 120 ~~i~it~G~~~al~~~-~~~l~~-~gd~Vlv~~P~y~~---------------~~~~~~~~~G~~~~~v~~~~~~~~~~d 182 (483)
..+++.+|++.+|-.. ...|.. .|-.|++..-.-.. ....+... |.++..+..|- -|
T Consensus 47 gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~-G~~a~~i~~Dv-----td 120 (405)
T 3zu3_A 47 PKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK-GLYAKSINGDA-----FS 120 (405)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT-TCCEEEEESCT-----TS
T ss_pred CCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc-CCceEEEECCC-----CC
Confidence 3444444444455443 355666 78777654211110 12233443 77777777653 36
Q ss_pred HHHHHHHHHHHHhcCCceeEEEEeCC
Q 011570 183 MEALEAAYEKAQESNIRIKGVLITNP 208 (483)
Q Consensus 183 ~~~l~~~i~~~~~~~~~~~~i~l~~P 208 (483)
.+.+++++....++-.++.. +++|.
T Consensus 121 ~~~v~~~v~~i~~~~G~IDi-LVNNA 145 (405)
T 3zu3_A 121 DEIKQLTIDAIKQDLGQVDQ-VIYSL 145 (405)
T ss_dssp HHHHHHHHHHHHHHTSCEEE-EEECC
T ss_pred HHHHHHHHHHHHHHcCCCCE-EEEcC
Confidence 77888877766555456764 45553
No 398
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=32.93 E-value=2.1e+02 Score=26.38 Aligned_cols=76 Identities=11% Similarity=0.087 Sum_probs=39.9
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH---HHhhh------cCcEEEEeecCCCCCcccCHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR---DLRWR------TGVQLVPVVCDSSNDFKVTMEALEA 188 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---~~~~~------~G~~~~~v~~~~~~~~~~d~~~l~~ 188 (483)
....|+||.|+.-.=..++..|++.|..|++..-.-..... .+... .+++++...+ -|.+.+.+
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-------~d~~~~~~ 96 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI-------RDLTTCEQ 96 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT-------TCHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC-------CCHHHHHH
Confidence 45678888764433344556677778777765432221111 11111 1455544333 25677777
Q ss_pred HHHHHHhcCCceeEEEEeC
Q 011570 189 AYEKAQESNIRIKGVLITN 207 (483)
Q Consensus 189 ~i~~~~~~~~~~~~i~l~~ 207 (483)
++. ++.+||-+-
T Consensus 97 ~~~-------~~d~Vih~A 108 (351)
T 3ruf_A 97 VMK-------GVDHVLHQA 108 (351)
T ss_dssp HTT-------TCSEEEECC
T ss_pred Hhc-------CCCEEEECC
Confidence 764 456666553
No 399
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=32.92 E-value=1.5e+02 Score=26.42 Aligned_cols=92 Identities=12% Similarity=0.133 Sum_probs=44.6
Q ss_pred EEEeCChhHHHHHHHHHhcCC--CCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 122 IVMSGGATGAHETVAFCLADP--GDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~--gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
|+||.|+...=..+...|.+. |..|.+..-.-..... +... +++++...+. |.+.+.++++ .
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~~~-~~~~~~~D~~-------d~~~~~~~~~-------~ 65 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA-LAAQ-GITVRQADYG-------DEAALTSALQ-------G 65 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH-HHHT-TCEEEECCTT-------CHHHHHHHTT-------T
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh-hhcC-CCeEEEcCCC-------CHHHHHHHHh-------C
Confidence 566655433334445666665 7666654322222222 2222 6666554432 5677777764 4
Q ss_pred eeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcC
Q 011570 200 IKGVLITNPSNPLGTFLDRETLKDIVSFINEKN 232 (483)
Q Consensus 200 ~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~ 232 (483)
+..|+.+...++... ..-...+++.|.+.+
T Consensus 66 ~d~vi~~a~~~~~~~---~~~~~~l~~a~~~~~ 95 (286)
T 2zcu_A 66 VEKLLLISSSEVGQR---APQHRNVINAAKAAG 95 (286)
T ss_dssp CSEEEECC-----------CHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCCchHH---HHHHHHHHHHHHHcC
Confidence 566665543222111 123566777777665
No 400
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=32.76 E-value=90 Score=28.64 Aligned_cols=21 Identities=5% Similarity=0.283 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHhhcCcEEEEc
Q 011570 218 RETLKDIVSFINEKNIHLVCD 238 (483)
Q Consensus 218 ~~~l~~i~~~a~~~~~~iI~D 238 (483)
.+.++++++.|.++|+.||+|
T Consensus 64 ~~~ld~~v~~a~~~Gi~Vild 84 (302)
T 1bqc_A 64 PSDVANVISLCKQNRLICMLE 84 (302)
T ss_dssp HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEE
Confidence 455666666666666666665
No 401
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=32.74 E-value=2.6e+02 Score=24.63 Aligned_cols=100 Identities=18% Similarity=0.158 Sum_probs=50.6
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhc----CcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRT----GVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~----G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
..++||.|+...=..+...|.+.|..|++..-.-.......+... +.++..+..|- -|.+.+++.+++..+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~ 82 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDI-----REPGDIDRLFEKARD 82 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 456666555433344556677788887766433222222222110 22555555542 257777777766544
Q ss_pred cCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPS-NPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 196 ~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~ 226 (483)
+.. +..+| +|.. .+.+. -.+.+++++..+
T Consensus 83 ~~g-id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (260)
T 2z1n_A 83 LGG-ADILV-YSTGGPRPGRFMELGVEDWDESYR 114 (260)
T ss_dssp TTC-CSEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred hcC-CCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 433 66544 4432 22222 245666666554
No 402
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=32.71 E-value=2e+02 Score=25.86 Aligned_cols=101 Identities=22% Similarity=0.249 Sum_probs=51.2
Q ss_pred cEEEeCChhHHHHH-HHHHhcCCCCeEEEeCCCCcChHHHHhh---hcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 121 RIVMSGGATGAHET-VAFCLADPGDAFLVPTPYYPGFDRDLRW---RTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 121 ~i~it~G~~~al~~-~~~~l~~~gd~Vlv~~P~y~~~~~~~~~---~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
.+++.+|++.+|-. +...|.+.|..|++..-.-......... ..+..+..+..|- -|.+.+++.+++..++
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 108 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDV-----GDPDQVAALFAAVRAE 108 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 34444455555543 4466778888888765443322222221 1122234455442 2567777777655444
Q ss_pred CCceeEEEEeCCC-C-CCcC--CCCHHHHHHHHHH
Q 011570 197 NIRIKGVLITNPS-N-PLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 197 ~~~~~~i~l~~P~-N-PtG~--~~~~~~l~~i~~~ 227 (483)
-.++..+| +|.. . +.+. -.+.++++++.+.
T Consensus 109 ~g~iD~lv-nnAG~~~~~~~~~~~~~~~~~~~~~v 142 (281)
T 4dry_A 109 FARLDLLV-NNAGSNVPPVPLEEVTFEQWNGIVAA 142 (281)
T ss_dssp HSCCSEEE-ECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCCCcccCCHHHHHHHHHH
Confidence 34566544 4442 1 2121 2567777777664
No 403
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=32.44 E-value=33 Score=34.03 Aligned_cols=29 Identities=24% Similarity=0.547 Sum_probs=25.4
Q ss_pred CCCCcCCCCHHHHHHHHHHHhhcCcEEEE
Q 011570 209 SNPLGTFLDRETLKDIVSFINEKNIHLVC 237 (483)
Q Consensus 209 ~NPtG~~~~~~~l~~i~~~a~~~~~~iI~ 237 (483)
++|.|..+|.+++++|++.|+++|+-||-
T Consensus 85 ~~~~~~~YT~~di~eIv~YA~~rgI~VIP 113 (442)
T 2yl5_A 85 DDPNGTALTQAEVTELIEYAKSKDIGLIP 113 (442)
T ss_dssp CCTTCSCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCeeee
Confidence 35678899999999999999999998774
No 404
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=32.25 E-value=2.6e+02 Score=24.55 Aligned_cols=97 Identities=15% Similarity=0.135 Sum_probs=49.2
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
..++||.|+...=..+...|.+.|..|++..-.-.. ....... +. ..+..|- -|.+.+++++++..+.-.+
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-~~--~~~~~D~-----~~~~~~~~~~~~~~~~~g~ 77 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-GG--AFFQVDL-----EDERERVRFVEEAAYALGR 77 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-TC--EEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-hC--CEEEeeC-----CCHHHHHHHHHHHHHHcCC
Confidence 456676555443344556677888877765433222 3333333 32 3334332 2567777776654333335
Q ss_pred eeEEEEeCCC-CCCcC--CCCHHHHHHHHH
Q 011570 200 IKGVLITNPS-NPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 200 ~~~i~l~~P~-NPtG~--~~~~~~l~~i~~ 226 (483)
+..+| +|.. .+.+. -.+.+++++..+
T Consensus 78 iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 106 (256)
T 2d1y_A 78 VDVLV-NNAAIAAPGSALTVRLPEWRRVLE 106 (256)
T ss_dssp CCEEE-ECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 66544 4442 22222 245666666655
No 405
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=32.22 E-value=2.5e+02 Score=24.26 Aligned_cols=98 Identities=15% Similarity=0.158 Sum_probs=49.7
Q ss_pred EEEeCChhHHH-HHHHHHhcCCCCeEEE-eCCCCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 122 IVMSGGATGAH-ETVAFCLADPGDAFLV-PTPYYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 122 i~it~G~~~al-~~~~~~l~~~gd~Vlv-~~P~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
++||.| +.+| ..+...|.+.|..|++ ....-..... .+... +.++..+..|- -|.+.+++++++..++
T Consensus 4 vlVTGa-sggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 76 (244)
T 1edo_A 4 VVVTGA-SRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-GGQAITFGGDV-----SKEADVEAMMKTAIDA 76 (244)
T ss_dssp EEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-TCEEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred EEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEeCCC-----CCHHHHHHHHHHHHHH
Confidence 455544 4444 3444667778888776 3333221111 22223 66676666553 2577787777665444
Q ss_pred CCceeEEEEeCCCCCCcC--CCCHHHHHHHHH
Q 011570 197 NIRIKGVLITNPSNPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 197 ~~~~~~i~l~~P~NPtG~--~~~~~~l~~i~~ 226 (483)
-.++..+|.+--..+.+. -.+.+++++..+
T Consensus 77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (244)
T 1edo_A 77 WGTIDVVVNNAGITRDTLLIRMKKSQWDEVID 108 (244)
T ss_dssp SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCcCcccCCHHHHHHHHH
Confidence 345665554322222221 245555655554
No 406
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=32.15 E-value=1.6e+02 Score=26.26 Aligned_cols=93 Identities=16% Similarity=0.226 Sum_probs=53.2
Q ss_pred cEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 121 RIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 121 ~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
.++||.|++ +|- .+...|.+.|-.|++.+-.-... ....+.++..+..|- -|.+.+++.++++ .+
T Consensus 13 ~alVTGas~-GIG~aia~~la~~Ga~Vv~~~~~~~~~----~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~----g~ 78 (242)
T 4b79_A 13 QVLVTGGSS-GIGAAIAMQFAELGAEVVALGLDADGV----HAPRHPRIRREELDI-----TDSQRLQRLFEAL----PR 78 (242)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEEESSTTST----TSCCCTTEEEEECCT-----TCHHHHHHHHHHC----SC
T ss_pred EEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHH----hhhhcCCeEEEEecC-----CCHHHHHHHHHhc----CC
Confidence 455555544 554 44467888898887765432221 111255566666553 2577788777653 35
Q ss_pred eeEEEEeCCC-CCCcCCCCHHHHHHHHHHH
Q 011570 200 IKGVLITNPS-NPLGTFLDRETLKDIVSFI 228 (483)
Q Consensus 200 ~~~i~l~~P~-NPtG~~~~~~~l~~i~~~a 228 (483)
.. ++++|.. +....-++.++++++.+.-
T Consensus 79 iD-iLVNNAGi~~~~~~~~~~~w~~~~~vN 107 (242)
T 4b79_A 79 LD-VLVNNAGISRDREEYDLATFERVLRLN 107 (242)
T ss_dssp CS-EEEECCCCCCGGGGGSHHHHHHHHHHH
T ss_pred CC-EEEECCCCCCCcccCCHHHHHHHHHHh
Confidence 66 4556552 3334456777787777753
No 407
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=32.12 E-value=78 Score=29.49 Aligned_cols=61 Identities=21% Similarity=0.238 Sum_probs=0.0
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc---CcEEEE
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK---NIHLVC 237 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~---~~~iI~ 237 (483)
|+++++ .+|.+.+++.++...+. .+..|+++ -++=-+..++.+|+.++++.+.+. ++.||.
T Consensus 25 Pf~~dg--~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 25 PFTATA--EVDYGKLEENLHKLGTF--PFRGFVVQ-GSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp CBCTTS--CBCHHHHHHHHHHHTTS--CCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred cCCCCC--CcCHHHHHHHHHHHHHc--CCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
No 408
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=32.11 E-value=2.5e+02 Score=24.36 Aligned_cols=101 Identities=15% Similarity=0.109 Sum_probs=51.1
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCC-CcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPY-YPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~-y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
..++||.|+...=..+...|.+.|..|++..-. -...... +... +.++..+..|- -|.+.+++.+++..+
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 81 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD-GGDAAFFAADL-----ATSEACQQLVDEFVA 81 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT-TCEEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHHH
Confidence 356666554433334456677788777765433 2222222 2222 56666666553 257777777765443
Q ss_pred cCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPS-NPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 196 ~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~ 226 (483)
.-.++..||.+--. .+.+. -.+.++++++.+
T Consensus 82 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 3afn_B 82 KFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMD 115 (258)
T ss_dssp HHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCcCCcCccccCCHHHHHHHHH
Confidence 32356655543222 22222 235555555544
No 409
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=31.57 E-value=2.4e+02 Score=24.10 Aligned_cols=53 Identities=11% Similarity=0.061 Sum_probs=36.4
Q ss_pred cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcC
Q 011570 164 TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKN 232 (483)
Q Consensus 164 ~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~ 232 (483)
.|.+++.+..+ +.++.+.+++.+. ++++|.++.-..+ +.+.++++++..++.+
T Consensus 115 ~G~~v~~LG~~------vp~~~l~~~~~~~-----~~d~v~lS~~~~~-----~~~~~~~~i~~l~~~~ 167 (210)
T 1y80_A 115 GGFTVYNLGVD------IEPGKFVEAVKKY-----QPDIVGMSALLTT-----TMMNMKSTIDALIAAG 167 (210)
T ss_dssp TTCEEEECCSS------BCHHHHHHHHHHH-----CCSEEEEECCSGG-----GTHHHHHHHHHHHHTT
T ss_pred CCCEEEECCCC------CCHHHHHHHHHHc-----CCCEEEEeccccc-----cHHHHHHHHHHHHhcC
Confidence 49999876543 6788888888764 6777777643222 3456888888777654
No 410
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=31.47 E-value=2.5e+02 Score=24.19 Aligned_cols=101 Identities=12% Similarity=0.148 Sum_probs=49.6
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCC-------eEEEeCCCCcChHHHHhhh--cCcEEEEeecCCCCCcccCHHHHHHHHH
Q 011570 121 RIVMSGGATGAHETVAFCLADPGD-------AFLVPTPYYPGFDRDLRWR--TGVQLVPVVCDSSNDFKVTMEALEAAYE 191 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd-------~Vlv~~P~y~~~~~~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~i~ 191 (483)
.++||.|+...=..+...|.+.|. .|++..-.-.......... .+.++..+..|- -|.+.++++++
T Consensus 4 ~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 78 (244)
T 2bd0_A 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADI-----SDMADVRRLTT 78 (244)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCT-----TSHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecC-----CCHHHHHHHHH
Confidence 356665544332344456666676 6666543322222211111 155666666543 25777777776
Q ss_pred HHHhcCCceeEEEEeCCCCCCcC--CCCHHHHHHHHH
Q 011570 192 KAQESNIRIKGVLITNPSNPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 192 ~~~~~~~~~~~i~l~~P~NPtG~--~~~~~~l~~i~~ 226 (483)
...+...++..||.+--..+.+. -.+.+++++..+
T Consensus 79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (244)
T 2bd0_A 79 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMN 115 (244)
T ss_dssp HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHH
Confidence 55444345675554422222221 235566666555
No 411
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=30.89 E-value=2.6e+02 Score=24.10 Aligned_cols=98 Identities=14% Similarity=0.064 Sum_probs=48.5
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
....++||.|+...=..+...|.+.|..|++....-...........+.+++..++ -|.+.+++.++. .
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~----~ 74 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDL-------GDWDATEKALGG----I 74 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCT-------TCHHHHHHHHTT----C
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecC-------CCHHHHHHHHHH----c
Confidence 34457777665544345556677788887776543222222222222566553332 256777776652 1
Q ss_pred CceeEEEEeCCCCCCcC--CCCHHHHHHHHH
Q 011570 198 IRIKGVLITNPSNPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 198 ~~~~~i~l~~P~NPtG~--~~~~~~l~~i~~ 226 (483)
.++..|+-+--..+.+. -.+.+++++..+
T Consensus 75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 105 (244)
T 1cyd_A 75 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFS 105 (244)
T ss_dssp CCCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCcccCCCCcccCCHHHHHHHHh
Confidence 24565543322222221 235555555544
No 412
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=30.79 E-value=1.3e+02 Score=28.13 Aligned_cols=57 Identities=12% Similarity=0.121 Sum_probs=40.8
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc--CcEEEE
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK--NIHLVC 237 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~--~~~iI~ 237 (483)
+..+|.+.+++.++...+. .+..|+++ -++=-+..++.+|+.++++.+.+. .+.||.
T Consensus 23 dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 23 DGKIDDVSIDRLTDFYAEV--GCEGVTVL-GILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp TSCBCHHHHHHHHHHHHHT--TCSEEEES-TGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHC--CCCEEEeC-ccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 4579999999988876554 46676654 333345668999999999988764 456655
No 413
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=30.67 E-value=2e+02 Score=26.19 Aligned_cols=110 Identities=13% Similarity=0.114 Sum_probs=71.7
Q ss_pred HHHHHHHHHHhhhCCCCCcCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCC
Q 011570 99 FRNAVAKFMGKVRGNRITFDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSND 178 (483)
Q Consensus 99 Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~ 178 (483)
|++.|.-+.. .+|.+..|+|-.=..+. .| .+..|...++.+ |.+.+.+. ++.
T Consensus 82 l~ekI~l~~~-----------~gV~v~~GGTlfE~~l~-----qg--------~~~~yl~~~k~l-GF~~IEIS---dGt 133 (276)
T 1u83_A 82 LEEKISTLKE-----------HDITFFFGGTLFEKYVS-----QK--------KVNEFHRYCTYF-GCEYIEIS---NGT 133 (276)
T ss_dssp HHHHHHHHHH-----------TTCEEEECHHHHHHHHH-----TT--------CHHHHHHHHHHT-TCSEEEEC---CSS
T ss_pred HHHHHHHHHH-----------cCCeEeCCcHHHHHHHH-----cC--------cHHHHHHHHHHc-CCCEEEEC---CCc
Confidence 8888777644 47888889874433332 23 567788889987 99999987 345
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEeCC--CCC-CcCCCCHHHHHHHHHHHhhcCcEEEEcccc
Q 011570 179 FKVTMEALEAAYEKAQESNIRIKGVLITNP--SNP-LGTFLDRETLKDIVSFINEKNIHLVCDEIY 241 (483)
Q Consensus 179 ~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P--~NP-tG~~~~~~~l~~i~~~a~~~~~~iI~Deay 241 (483)
..++.+...+.|+.... . ..+++.. -+| .....+.+++-+.++.+-+.|...|+=|+-
T Consensus 134 i~l~~~~~~~lI~~a~~---~--f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEaR 194 (276)
T 1u83_A 134 LPMTNKEKAAYIADFSD---E--FLVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEAR 194 (276)
T ss_dssp SCCCHHHHHHHHHHHTT---T--SEEEEECSCCC------CCSTHHHHHHHHHHHHTEEEEEEC--
T ss_pred ccCCHHHHHHHHHHHHh---h--cEEeeeccccCccccCCCCHHHHHHHHHHHHHCCCcEEEEeee
Confidence 56889999999986521 2 3344433 233 344567677777777777789888777774
No 414
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=30.55 E-value=2.6e+02 Score=24.09 Aligned_cols=97 Identities=18% Similarity=0.171 Sum_probs=47.3
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
....++||.|+...=..+...|.+.|..|++..-.-...........+.+++..++ -|.+.+++.+.. .
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~----~ 74 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDL-------GDWEATERALGS----V 74 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCT-------TCHHHHHHHHTT----C
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeC-------CCHHHHHHHHHH----c
Confidence 34457777665544444556677788887766433222222222222555553332 256777776642 1
Q ss_pred CceeEEEEeCCC-CCCcC--CCCHHHHHHHHH
Q 011570 198 IRIKGVLITNPS-NPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 198 ~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~ 226 (483)
.++..|+ ++.. ...+. -.+.+++++..+
T Consensus 75 ~~id~vi-~~Ag~~~~~~~~~~~~~~~~~~~~ 105 (244)
T 3d3w_A 75 GPVDLLV-NNAAVALLQPFLEVTKEAFDRSFE 105 (244)
T ss_dssp CCCCEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEE-ECCccCCCcchhhCCHHHHHHHHH
Confidence 2456544 4432 22121 135555555554
No 415
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=30.52 E-value=2.1e+02 Score=26.52 Aligned_cols=103 Identities=18% Similarity=0.180 Sum_probs=55.1
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEe-CCC--CcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVP-TPY--YPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~P~--y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
..|+||.|+...=..++..|++.|..|.+. ... .+.-.. .+... |++++...+. |.+.+.+++++.
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~-~v~~~~~Dl~-------d~~~l~~~~~~~ 82 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDK-GAIIVYGLIN-------EQEAMEKILKEH 82 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHT-TCEEEECCTT-------CHHHHHHHHHHT
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhC-CcEEEEeecC-------CHHHHHHHHhhC
Confidence 467887663322233445566666555544 322 111111 12223 7777765543 678888888742
Q ss_pred HhcCCceeEEEEeCC-CCCCcCCCCHHHHHHHHHHHhhcC-cEEEEccccc
Q 011570 194 QESNIRIKGVLITNP-SNPLGTFLDRETLKDIVSFINEKN-IHLVCDEIYA 242 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P-~NPtG~~~~~~~l~~i~~~a~~~~-~~iI~Deay~ 242 (483)
++..||.+-. .|..| -..+++.|++.+ +-.++=..|+
T Consensus 83 -----~~d~Vi~~a~~~n~~~-------~~~l~~aa~~~g~v~~~v~S~~g 121 (346)
T 3i6i_A 83 -----EIDIVVSTVGGESILD-------QIALVKAMKAVGTIKRFLPSEFG 121 (346)
T ss_dssp -----TCCEEEECCCGGGGGG-------HHHHHHHHHHHCCCSEEECSCCS
T ss_pred -----CCCEEEECCchhhHHH-------HHHHHHHHHHcCCceEEeecccC
Confidence 4666665543 34433 367888888877 4333324554
No 416
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=30.43 E-value=3e+02 Score=24.62 Aligned_cols=100 Identities=15% Similarity=0.154 Sum_probs=50.7
Q ss_pred CcEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcC-h---HHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 120 DRIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPG-F---DRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 120 ~~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~-~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
..++|| |++.+|- .+...|.+.|..|++..-.-.. . ...+... |.++..+..|- -|.+.+++.+++..
T Consensus 30 k~vlVT-Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 102 (283)
T 1g0o_A 30 KVALVT-GAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-GSDAACVKANV-----GVVEDIVRMFEEAV 102 (283)
T ss_dssp CEEEET-TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CEEEEe-CCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh-CCCeEEEEcCC-----CCHHHHHHHHHHHH
Confidence 345555 4454554 4456677888887765432211 1 1222333 66666666553 25667776665543
Q ss_pred hcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 195 ESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
+.-.++..+ ++|.. ...+. -.+.++++++.+.
T Consensus 103 ~~~g~iD~l-v~~Ag~~~~~~~~~~~~~~~~~~~~~ 137 (283)
T 1g0o_A 103 KIFGKLDIV-CSNSGVVSFGHVKDVTPEEFDRVFTI 137 (283)
T ss_dssp HHHSCCCEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEE-EECCCcCCCCCcccCCHHHHHHHHHH
Confidence 332356644 44442 22222 2356666666553
No 417
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=29.95 E-value=3.1e+02 Score=25.25 Aligned_cols=98 Identities=19% Similarity=0.286 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCCh---hHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeec
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGA---TGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~ 173 (483)
.+-|..+.+..-+..+ ..--|+++.|+ .+++..+-.+---.-|.|++..|.|....
T Consensus 68 ~~Er~~v~~~~~~~~~-----grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~---------------- 126 (304)
T 3cpr_A 68 AAEKLELLKAVREEVG-----DRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKPS---------------- 126 (304)
T ss_dssp HHHHHHHHHHHHHHHT-----TTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCC----------------
T ss_pred HHHHHHHHHHHHHHhC-----CCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC----------------
Confidence 4445555555443321 12247787775 45665554443223388999999884321
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHH
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVS 226 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~ 226 (483)
.+.+.+..+...+. .+..++++++|.. ||..++.+.+.+|++
T Consensus 127 ---------~~~l~~~f~~ia~a-~~lPiilYn~P~~-tg~~l~~~~~~~La~ 168 (304)
T 3cpr_A 127 ---------QEGLLAHFGAIAAA-TEVPICLYDIPGR-SGIPIESDTMRRLSE 168 (304)
T ss_dssp ---------HHHHHHHHHHHHHH-CCSCEEEEECHHH-HSSCCCHHHHHHHTT
T ss_pred ---------HHHHHHHHHHHHHh-cCCCEEEEeCccc-cCcCCCHHHHHHHHc
Confidence 11122222111111 1456777777764 788899777776653
No 418
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=29.69 E-value=2.9e+02 Score=24.28 Aligned_cols=103 Identities=15% Similarity=0.146 Sum_probs=54.5
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
....++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++++++..
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 81 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-GFKVEASVCDL-----SSRSERQELMNTVA 81 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 334577776655433455566778888877654332222221 2222 66676666553 25777777776554
Q ss_pred hcC-CceeEEEEeCCC-CCCc--CCCCHHHHHHHHHH
Q 011570 195 ESN-IRIKGVLITNPS-NPLG--TFLDRETLKDIVSF 227 (483)
Q Consensus 195 ~~~-~~~~~i~l~~P~-NPtG--~~~~~~~l~~i~~~ 227 (483)
++- .++..+| +|.. .+.+ .-.+.++++++.+.
T Consensus 82 ~~~~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~ 117 (260)
T 2ae2_A 82 NHFHGKLNILV-NNAGIVIYKEAKDYTVEDYSLIMSI 117 (260)
T ss_dssp HHTTTCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 432 3566544 4442 2222 12466666666553
No 419
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=29.55 E-value=31 Score=33.24 Aligned_cols=69 Identities=20% Similarity=0.368 Sum_probs=42.4
Q ss_pred HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce----eEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcE
Q 011570 159 DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI----KGVLITNPSNPLGTFLDRETLKDIVSFINEKNIH 234 (483)
Q Consensus 159 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~----~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~ 234 (483)
.+... +.++..+.+.++.+|.+....+-+... .+ +..+ .++ .+.|..+|.+++++|++.|+++|+-
T Consensus 41 ~mA~~-KlN~lH~HltDdq~~rle~~~~~~~~~-------~~~~~~~g~~-~~~-~~~~g~YT~~di~eiv~YA~~rgI~ 110 (367)
T 1yht_A 41 TISLS-GGNFLHLHFSDHENYAIESHLLNQRAE-------NAVQGKDGIY-INP-YTGKPFLSYRQLDDIKAYAKAKGIE 110 (367)
T ss_dssp HHHHT-TCCEEEEECBSSSCBCBCBTTTTBCGG-------GSEECTTSCE-ECT-TTCCEEBCHHHHHHHHHHHHHTTCE
T ss_pred HHHHc-CCcEEEEEEEcCCCceeeecchhhhhh-------hhccccCCCc-CCC-CCCCCCcCHHHHHHHHHHHHHcCCE
Confidence 34443 888888888777778776432211000 00 0001 111 2234579999999999999999998
Q ss_pred EEE
Q 011570 235 LVC 237 (483)
Q Consensus 235 iI~ 237 (483)
||-
T Consensus 111 VIP 113 (367)
T 1yht_A 111 LIP 113 (367)
T ss_dssp EEE
T ss_pred EEE
Confidence 774
No 420
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=29.50 E-value=1.7e+02 Score=26.63 Aligned_cols=101 Identities=10% Similarity=0.153 Sum_probs=52.6
Q ss_pred CcEEEeCChhHHHH-HHHHHhcCCCC---eEEEeCCCCcChHHHHhhh----cCcEEEEeecCCCCCcccCHHHHHHHHH
Q 011570 120 DRIVMSGGATGAHE-TVAFCLADPGD---AFLVPTPYYPGFDRDLRWR----TGVQLVPVVCDSSNDFKVTMEALEAAYE 191 (483)
Q Consensus 120 ~~i~it~G~~~al~-~~~~~l~~~gd---~Vlv~~P~y~~~~~~~~~~----~G~~~~~v~~~~~~~~~~d~~~l~~~i~ 191 (483)
..++||.|+. +|- .+...|.+.|. .|++..-.-.......... .|.++..+..|- -|.+.+++.++
T Consensus 34 k~~lVTGas~-GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~ 107 (287)
T 3rku_A 34 KTVLITGASA-GIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDI-----TQAEKIKPFIE 107 (287)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCT-----TCGGGHHHHHH
T ss_pred CEEEEecCCC-hHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCC-----CCHHHHHHHHH
Confidence 4566665554 444 34455666664 6666554433222222211 156777777653 25667777776
Q ss_pred HHHhcCCceeEEEEeCCC-C-CCcC--CCCHHHHHHHHHH
Q 011570 192 KAQESNIRIKGVLITNPS-N-PLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 192 ~~~~~~~~~~~i~l~~P~-N-PtG~--~~~~~~l~~i~~~ 227 (483)
+..++-.++.. +++|.. . +.+. -++.++++++.+.
T Consensus 108 ~~~~~~g~iD~-lVnnAG~~~~~~~~~~~~~~~~~~~~~v 146 (287)
T 3rku_A 108 NLPQEFKDIDI-LVNNAGKALGSDRVGQIATEDIQDVFDT 146 (287)
T ss_dssp TSCGGGCSCCE-EEECCCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred HHHHhcCCCCE-EEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 54333335664 445543 2 2222 2477777777664
No 421
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=29.46 E-value=2.7e+02 Score=24.05 Aligned_cols=94 Identities=13% Similarity=0.141 Sum_probs=44.9
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCce
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRI 200 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 200 (483)
.++||.|+...=..+...|.+.|..|++..-.-.. ..+.. |...+..++.+ . +++.+.+.+.+ .-.++
T Consensus 4 ~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~-~~~~~~~D~~~-~----~~~~~~~~~~~---~~g~i 71 (239)
T 2ekp_A 4 KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL-GAVPLPTDLEK-D----DPKGLVKRALE---ALGGL 71 (239)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH-TCEEEECCTTT-S----CHHHHHHHHHH---HHTSC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh-CcEEEecCCch-H----HHHHHHHHHHH---HcCCC
Confidence 46666555443344556677788887765433222 23333 65554444332 1 33333332221 11256
Q ss_pred eEEEEeCCC-CCCc--CCCCHHHHHHHHHH
Q 011570 201 KGVLITNPS-NPLG--TFLDRETLKDIVSF 227 (483)
Q Consensus 201 ~~i~l~~P~-NPtG--~~~~~~~l~~i~~~ 227 (483)
..++ +|.. .+.+ .-.+.++++++.+.
T Consensus 72 d~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~ 100 (239)
T 2ekp_A 72 HVLV-HAAAVNVRKPALELSYEEWRRVLYL 100 (239)
T ss_dssp CEEE-ECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 6544 4432 2222 23466777766653
No 422
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=29.44 E-value=33 Score=34.03 Aligned_cols=27 Identities=11% Similarity=0.372 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 217 DRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 217 ~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
+.++++++++.|+++|+-||.|-|+-.
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~NH 101 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVINH 101 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCc
Confidence 689999999999999999999999865
No 423
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=29.40 E-value=29 Score=36.83 Aligned_cols=27 Identities=15% Similarity=0.385 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 217 DRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 217 ~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
+.++++++++.|+++|+-||.|-+|..
T Consensus 253 ~~~efk~lV~~~H~~Gi~VilDvV~NH 279 (714)
T 2ya0_A 253 RIAEFKNLINEIHKRGMGAILDVVYNH 279 (714)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTTB
T ss_pred hHHHHHHHHHHHHHCCCEEEEEeccCc
Confidence 378999999999999999999999964
No 424
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=29.21 E-value=32 Score=34.03 Aligned_cols=28 Identities=25% Similarity=0.605 Sum_probs=24.8
Q ss_pred CCCcCCCCHHHHHHHHHHHhhcCcEEEE
Q 011570 210 NPLGTFLDRETLKDIVSFINEKNIHLVC 237 (483)
Q Consensus 210 NPtG~~~~~~~l~~i~~~a~~~~~~iI~ 237 (483)
+|.|..+|.+++++|++.|+++|+-||-
T Consensus 83 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 110 (434)
T 2yl6_A 83 DPNGNHLTESQMTDLINYAKDKGIGLIP 110 (434)
T ss_dssp CTTCSCEEHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 4667899999999999999999998774
No 425
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=29.07 E-value=1.3e+02 Score=27.03 Aligned_cols=55 Identities=18% Similarity=0.360 Sum_probs=37.0
Q ss_pred ccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCC--CHHHHHHHHHHHhhcCcEEEEccc
Q 011570 180 KVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFL--DRETLKDIVSFINEKNIHLVCDEI 240 (483)
Q Consensus 180 ~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~--~~~~l~~i~~~a~~~~~~iI~Dea 240 (483)
.++.++++..++.....-+....| ||-+|..+ +.+-++.+++.++++| ++++|.-
T Consensus 79 ~~s~~ei~~~l~~al~~vP~a~Gv-----nNHmGS~~T~~~~~m~~vm~~l~~~g-L~fvDS~ 135 (245)
T 2nly_A 79 NLSVGEVKSRVRKAFDDIPYAVGL-----NNHMGSKIVENEKIMRAILEVVKEKN-AFIIDSG 135 (245)
T ss_dssp TCCHHHHHHHHHHHHHHSTTCCEE-----EEEECTTGGGCHHHHHHHHHHHHHTT-CEEEECC
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEE-----ecccccchhcCHHHHHHHHHHHHHCC-CEEEcCC
Confidence 356788888887765543433332 45567755 4667999999999998 4555654
No 426
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=29.02 E-value=2.1e+02 Score=27.32 Aligned_cols=57 Identities=12% Similarity=0.215 Sum_probs=36.4
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc---CcEEEE
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK---NIHLVC 237 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~---~~~iI~ 237 (483)
+..+|.+.+++.++...+. .+..|+++ -++=-+..++.+|..++++.+.+. .+.||.
T Consensus 74 dg~ID~~al~~lv~~li~~--Gv~Gl~v~-GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 74 DGRFDLEAYDDLVNIQIQN--GAEGVIVG-GTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp TSSBCHHHHHHHHHHHHHT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEec-ccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 4478888888887765444 45666654 233344567888888888876552 355554
No 427
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=28.79 E-value=3e+02 Score=24.15 Aligned_cols=102 Identities=13% Similarity=0.095 Sum_probs=49.2
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
..++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.+++....
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 88 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK-GFQVTGSVCDA-----SLRPEREKLMQTVSSM 88 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeeEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 3456655444333445566777888777664332222221 2222 55565555543 2566777766554332
Q ss_pred C-CceeEEEEeCCCCCCcC--CCCHHHHHHHHHH
Q 011570 197 N-IRIKGVLITNPSNPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 197 ~-~~~~~i~l~~P~NPtG~--~~~~~~l~~i~~~ 227 (483)
- .++..||.+--..+.+. -.+.+++++..+.
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 122 (266)
T 1xq1_A 89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHIST 122 (266)
T ss_dssp HTTCCSEEEEECCC------CCCCHHHHHHHHHH
T ss_pred hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 1 35676554432222221 2355666655553
No 428
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=28.62 E-value=2.5e+02 Score=23.25 Aligned_cols=108 Identities=13% Similarity=0.147 Sum_probs=55.6
Q ss_pred cCCCcEEEeCChhHHHHHHHHHhcCCC--CeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 117 FDPDRIVMSGGATGAHETVAFCLADPG--DAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 117 ~~~~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
++++.+++..-+..+...+..+...|. ..++...|.+..............+.-+.-+. +..++++..++..+...
T Consensus 99 ~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~p~li~~G~~--D~~v~~~~~~~~~~~l~ 176 (209)
T 3og9_A 99 LDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFEQTVQLDDKHVFLSYAPN--DMIVPQKNFGDLKGDLE 176 (209)
T ss_dssp CCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCCCCCCCTTCEEEEEECTT--CSSSCHHHHHHHHHHHH
T ss_pred CCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcccccccccCCCEEEEcCCC--CCccCHHHHHHHHHHHH
Confidence 466777777666666655555554443 55666666543211111111134444444332 22345554444433333
Q ss_pred hcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc
Q 011570 195 ESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK 231 (483)
Q Consensus 195 ~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~ 231 (483)
..+.++. +...| .|..++.+++.++.++..++
T Consensus 177 ~~~~~~~--~~~~~---~gH~~~~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 177 DSGCQLE--IYESS---LGHQLTQEEVLAAKKWLTET 208 (209)
T ss_dssp HTTCEEE--EEECS---STTSCCHHHHHHHHHHHHHH
T ss_pred HcCCceE--EEEcC---CCCcCCHHHHHHHHHHHHhh
Confidence 3333333 33333 57778888999998887654
No 429
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=28.35 E-value=3e+02 Score=25.14 Aligned_cols=98 Identities=13% Similarity=0.124 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCCh---hHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeec
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGA---TGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~ 173 (483)
.+-|..+.+...+..+ ..--|+++.|+ .+++..+-.+---.-|.|++..|.|...... ..
T Consensus 56 ~~Er~~v~~~~~~~~~-----grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~--~l---------- 118 (293)
T 1f6k_A 56 TEEKKEIFRIAKDEAK-----DQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFP--EI---------- 118 (293)
T ss_dssp HHHHHHHHHHHHHHHT-----TSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHH--HH----------
T ss_pred HHHHHHHHHHHHHHhC-----CCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHH--HH----------
Confidence 3445555555443321 12347777776 4565555433222348899999988532110 00
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHH
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVS 226 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~ 226 (483)
.+.+++..+. .+..++++++|. .||..++.+.+.+|++
T Consensus 119 ---------~~~f~~va~a-----~~lPiilYn~P~-~tg~~l~~~~~~~La~ 156 (293)
T 1f6k_A 119 ---------KHYYDTIIAE-----TGSNMIVYSIPF-LTGVNMGIEQFGELYK 156 (293)
T ss_dssp ---------HHHHHHHHHH-----HCCCEEEEECHH-HHCCCCCHHHHHHHHT
T ss_pred ---------HHHHHHHHHh-----CCCCEEEEECcc-ccCcCCCHHHHHHHhc
Confidence 1122222211 134677888887 4898899887777753
No 430
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=28.19 E-value=2.9e+02 Score=23.76 Aligned_cols=101 Identities=10% Similarity=0.025 Sum_probs=49.4
Q ss_pred cEEEeCChhHHHHHHHHHhcCCC--CeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 121 RIVMSGGATGAHETVAFCLADPG--DAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
.++||.|+...=..+...|.+.| ..|++..-.-......... .+.++..+..|- -|.+.+++.+++..+.-.
T Consensus 5 ~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g 78 (250)
T 1yo6_A 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-KDSRVHVLPLTV-----TCDKSLDTFVSKVGEIVG 78 (250)
T ss_dssp EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC-CCTTEEEEECCT-----TCHHHHHHHHHHHHHHHG
T ss_pred EEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc-cCCceEEEEeec-----CCHHHHHHHHHHHHHhcC
Confidence 46666555433345556777888 7777664433222222211 144455555442 256667766665433212
Q ss_pred --ceeEEEEeCCCCC-CcC--CCCHHHHHHHHHH
Q 011570 199 --RIKGVLITNPSNP-LGT--FLDRETLKDIVSF 227 (483)
Q Consensus 199 --~~~~i~l~~P~NP-tG~--~~~~~~l~~i~~~ 227 (483)
++..||.+--..+ .+. -.+.+++++..+.
T Consensus 79 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~ 112 (250)
T 1yo6_A 79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDV 112 (250)
T ss_dssp GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHH
T ss_pred CCCCcEEEECCcccCCCcccccCCHHHHHHHHHH
Confidence 4665554422222 232 2355666655553
No 431
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=28.01 E-value=72 Score=29.80 Aligned_cols=51 Identities=10% Similarity=0.038 Sum_probs=35.6
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK 231 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~ 231 (483)
+..+|.+.+++.++...+. .+..|+++ -++=-+..++.+|..++++.+.+.
T Consensus 23 dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~ 73 (309)
T 3fkr_A 23 TGDLDLASQKRAVDFMIDA--GSDGLCIL-ANFSEQFAITDDERDVLTRTILEH 73 (309)
T ss_dssp TSSBCHHHHHHHHHHHHHT--TCSCEEES-SGGGTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccCcccCCHHHHHHHHHHHHHH
Confidence 3479999999988766554 45666654 233345568999999999888663
No 432
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=27.98 E-value=3.6e+02 Score=24.90 Aligned_cols=99 Identities=20% Similarity=0.178 Sum_probs=0.0
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCCh---hHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEee
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGA---TGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVV 172 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~ 172 (483)
..+=|.++.+..-+..+ ..--|+++.|+ .+++..+-.+---.-|.|++..|.|..
T Consensus 74 s~~Er~~v~~~~v~~~~-----grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~----------------- 131 (314)
T 3qze_A 74 DVEEHIQVIRRVVDQVK-----GRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNK----------------- 131 (314)
T ss_dssp CHHHHHHHHHHHHHHHT-----TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSC-----------------
T ss_pred CHHHHHHHHHHHHHHhC-----CCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCC-----------------
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHH
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVS 226 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~ 226 (483)
.+.+.+.+..+...+.. +..++++++|.. ||..++.+.+.+|++
T Consensus 132 --------~s~~~l~~~f~~va~a~-~lPiilYn~P~~-tg~~l~~~~~~~La~ 175 (314)
T 3qze_A 132 --------PTQEGMYQHFRHIAEAV-AIPQILYNVPGR-TSCDMLPETVERLSK 175 (314)
T ss_dssp --------CCHHHHHHHHHHHHHHS-CSCEEEEECHHH-HSCCCCHHHHHHHHT
T ss_pred --------CCHHHHHHHHHHHHHhc-CCCEEEEeCccc-cCCCCCHHHHHHHhc
No 433
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=27.91 E-value=1.5e+02 Score=27.31 Aligned_cols=51 Identities=18% Similarity=0.224 Sum_probs=35.0
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK 231 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~ 231 (483)
+..+|.+.+++.++...+. .+..|+++ -++=-+..++.+|+.++++.+.+.
T Consensus 14 dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 14 DNRIDKEKLKIHAENLIRK--GIDKLFVN-GTTGLGPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp TSSBCHHHHHHHHHHHHHT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 3478888888888765544 45666554 333345568888888888888764
No 434
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=27.90 E-value=1.3e+02 Score=27.92 Aligned_cols=57 Identities=14% Similarity=0.183 Sum_probs=41.0
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc----CcEEEE
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK----NIHLVC 237 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~----~~~iI~ 237 (483)
+..+|.+.+++.++...+. .+..|+++ -++=-+..++.+|+.++++.+.+. .+.||.
T Consensus 22 dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 22 NGKVDEQSYARLIKRQIEN--GIDAVVPV-GTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp TTEECHHHHHHHHHHHHHT--TCCEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 4479999999988776554 46666654 344445678999999999988664 466665
No 435
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=27.87 E-value=98 Score=28.47 Aligned_cols=76 Identities=9% Similarity=0.179 Sum_probs=45.0
Q ss_pred CCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHh
Q 011570 150 TPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFIN 229 (483)
Q Consensus 150 ~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~ 229 (483)
.|+|..+.+..... ...++-+-.+.+ .-.+.++++++. .++.+++..+ | ++.++.+++.+.|+
T Consensus 50 ~~vy~sl~el~~~~-~~D~viI~tP~~----~~~~~~~ea~~~------Gi~~iVi~t~----G--~~~~~~~~l~~~A~ 112 (288)
T 2nu8_A 50 LPVFNTVREAVAAT-GATASVIYVPAP----FCKDSILEAIDA------GIKLIITITE----G--IPTLDMLTVKVKLD 112 (288)
T ss_dssp EEEESSHHHHHHHH-CCCEEEECCCGG----GHHHHHHHHHHT------TCSEEEECCC----C--CCHHHHHHHHHHHH
T ss_pred eeccCCHHHHhhcC-CCCEEEEecCHH----HHHHHHHHHHHC------CCCEEEEECC----C--CCHHHHHHHHHHHH
Confidence 34566666655532 445544443321 235555555543 5665554322 3 35677889999999
Q ss_pred hcCcEEEEccccc
Q 011570 230 EKNIHLVCDEIYA 242 (483)
Q Consensus 230 ~~~~~iI~Deay~ 242 (483)
++++.++-..+.+
T Consensus 113 ~~gv~liGPNc~G 125 (288)
T 2nu8_A 113 EAGVRMIGPNTPG 125 (288)
T ss_dssp HHTCEEECSSCCE
T ss_pred HcCCEEEecCCcc
Confidence 9999887666654
No 436
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=27.72 E-value=2.1e+02 Score=25.43 Aligned_cols=83 Identities=14% Similarity=0.123 Sum_probs=41.9
Q ss_pred CCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHH
Q 011570 118 DPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQ 194 (483)
Q Consensus 118 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 194 (483)
....++||.|+...=..+...|.+.|..|++..-.-..... .+... +.++..+..|- -|.+.+++.+.+..
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~ 106 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY-GVHSKAYKCNI-----SDPKSVEETISQQE 106 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH-CSCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcceEEEeec-----CCHHHHHHHHHHHH
Confidence 33456666554432234445566778777765433222222 22222 55666665543 25677777766543
Q ss_pred hcCCceeEEEEe
Q 011570 195 ESNIRIKGVLIT 206 (483)
Q Consensus 195 ~~~~~~~~i~l~ 206 (483)
+.-.++..||.+
T Consensus 107 ~~~g~id~li~~ 118 (279)
T 3ctm_A 107 KDFGTIDVFVAN 118 (279)
T ss_dssp HHHSCCSEEEEC
T ss_pred HHhCCCCEEEEC
Confidence 332356655543
No 437
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=27.64 E-value=91 Score=28.15 Aligned_cols=23 Identities=22% Similarity=0.346 Sum_probs=11.1
Q ss_pred CCHHHHHHHHHHHhhcCcEEEEc
Q 011570 216 LDRETLKDIVSFINEKNIHLVCD 238 (483)
Q Consensus 216 ~~~~~l~~i~~~a~~~~~~iI~D 238 (483)
++.++++++++.|++.|+.+++|
T Consensus 134 l~~~~l~~l~~~a~~lGl~~lvE 156 (251)
T 1i4n_A 134 LTAEQIKEIYEAAEELGMDSLVE 156 (251)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCeEEEE
Confidence 34444555555555555444443
No 438
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=27.64 E-value=3.1e+02 Score=23.98 Aligned_cols=104 Identities=17% Similarity=0.179 Sum_probs=52.8
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHh---hhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLR---WRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~---~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
..++||.|+...=..+...|.+.|.+|++..-.-........ ...+.++..+..|-.. -|.+.+++.+++..++
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLT---CTSENCQQLAQRIAVN 89 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTT---CCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEeccc---CCHHHHHHHHHHHHHh
Confidence 456666555433334456677889888776544332222222 1112244444443211 2567777777665554
Q ss_pred CCceeEEEEeCCC--CCCcC--CCCHHHHHHHHHH
Q 011570 197 NIRIKGVLITNPS--NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 197 ~~~~~~i~l~~P~--NPtG~--~~~~~~l~~i~~~ 227 (483)
..++..+| +|.. .+.+. -.+.++++++.+.
T Consensus 90 ~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~ 123 (252)
T 3f1l_A 90 YPRLDGVL-HNAGLLGDVCPMSEQNPQVWQDVMQV 123 (252)
T ss_dssp CSCCSEEE-ECCCCCCCCSCTTTCCHHHHHHHHHH
T ss_pred CCCCCEEE-ECCccCCCCCCcccCCHHHHHHHHhh
Confidence 44677544 4442 22222 2466777766654
No 439
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=27.63 E-value=3.1e+02 Score=23.93 Aligned_cols=101 Identities=11% Similarity=0.106 Sum_probs=49.8
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCC-CCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTP-YYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P-~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
..++||.|+...=..+...|.+.|..|++..- .-..... .+... +.++..+..|- -|.+.+++.+++..+
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 81 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-GGEAIAVKGDV-----TVESDVINLVQSAIK 81 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCEEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHHH
Confidence 45666655443333445667777877776543 2211111 12222 56666666553 256777776665433
Q ss_pred cCCceeEEEEeCCCCCCcC--CCCHHHHHHHHH
Q 011570 196 SNIRIKGVLITNPSNPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 196 ~~~~~~~i~l~~P~NPtG~--~~~~~~l~~i~~ 226 (483)
+-.++..||.+--..+.+. -.+.+++++..+
T Consensus 82 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (261)
T 1gee_A 82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVID 114 (261)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3235665544322222221 245566655554
No 440
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=27.57 E-value=1.4e+02 Score=27.40 Aligned_cols=51 Identities=18% Similarity=0.305 Sum_probs=33.4
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK 231 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~ 231 (483)
+..+|.+.+++.++...+. .+..|+++ -++=-+..++.+|+.++++.+.+.
T Consensus 14 dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~ 64 (288)
T 2nuw_A 14 QGKVNVDALKTHAKNLLEK--GIDAIFVN-GTTGLGPALSKDEKRQNLNALYDV 64 (288)
T ss_dssp TSCBCHHHHHHHHHHHHHT--TCCEEEET-STTTTGGGSCHHHHHHHHHHHTTT
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 3468888888877765444 45665544 333345567888888888887664
No 441
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=27.54 E-value=1.8e+02 Score=26.87 Aligned_cols=51 Identities=4% Similarity=0.012 Sum_probs=36.5
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK 231 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~ 231 (483)
+..+|.+.+++.++...+. .+..|+++ -++=-+..++.+|..++++.+.+.
T Consensus 27 dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~ 77 (301)
T 1xky_A 27 NGNIDFAKTTKLVNYLIDN--GTTAIVVG-GTTGESPTLTSEEKVALYRHVVSV 77 (301)
T ss_dssp TSSBCHHHHHHHHHHHHHT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 4579999999988766554 46666654 334345568999999999988653
No 442
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=27.50 E-value=1.6e+02 Score=24.73 Aligned_cols=30 Identities=10% Similarity=-0.270 Sum_probs=21.6
Q ss_pred CChhHHHHHHHHHhcCCCCeEEEeCCCCcC
Q 011570 126 GGATGAHETVAFCLADPGDAFLVPTPYYPG 155 (483)
Q Consensus 126 ~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~ 155 (483)
.+..+.+..++..+.+.-|.|++..|....
T Consensus 59 ~~~~~~l~~~l~~l~~~yD~viiD~~~~~~ 88 (206)
T 4dzz_A 59 TAASEKDVYGIRKDLADYDFAIVDGAGSLS 88 (206)
T ss_dssp ECCSHHHHHTHHHHTTTSSEEEEECCSSSS
T ss_pred ecCcHHHHHHHHHhcCCCCEEEEECCCCCC
Confidence 333466777777777777999999987654
No 443
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=27.46 E-value=1.7e+02 Score=27.00 Aligned_cols=57 Identities=12% Similarity=0.187 Sum_probs=40.1
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc---CcEEEE
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK---NIHLVC 237 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~---~~~iI~ 237 (483)
+..+|.+.+++.++...+. .+..|+++ -++=-+..++.+|+.++++.+.+. .+.||.
T Consensus 22 dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 22 DGSIHYEQLRDLIDWHIEN--GTDGIVAV-GTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp TSCBCHHHHHHHHHHHHHT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEeC-ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4579999999988766554 46666654 344455678999999999988663 345554
No 444
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=26.87 E-value=2.8e+02 Score=23.95 Aligned_cols=81 Identities=19% Similarity=0.315 Sum_probs=42.1
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEe-CCCCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVP-TPYYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~P~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
..++||.|+...=..+...|.+.|..|++. ...-..... .+... +.++..+..|- -|.+.+++++++..+
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 79 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA-GINVVVAKGDV-----KNPEDVENMVKTAMD 79 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT-TCCEEEEESCT-----TSHHHHHHHHHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 346666554433334556677788777765 332222222 22222 55666666543 256777777765433
Q ss_pred cCCceeEEEEe
Q 011570 196 SNIRIKGVLIT 206 (483)
Q Consensus 196 ~~~~~~~i~l~ 206 (483)
...++..||.+
T Consensus 80 ~~~~~d~vi~~ 90 (247)
T 2hq1_A 80 AFGRIDILVNN 90 (247)
T ss_dssp HHSCCCEEEEC
T ss_pred hcCCCCEEEEC
Confidence 33356655433
No 445
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=26.77 E-value=2.5e+02 Score=24.84 Aligned_cols=95 Identities=13% Similarity=0.106 Sum_probs=49.4
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
..++||.|+...=..+...|.+.|..|++..-.-... ...++..+..|- -|.+.+++.+++..++-.+
T Consensus 29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~ 96 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS-------ADPDIHTVAGDI-----SKPETADRIVREGIERFGR 96 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC-------SSTTEEEEESCT-----TSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc-------ccCceEEEEccC-----CCHHHHHHHHHHHHHHCCC
Confidence 4456655544333344566778898887765332211 122344444442 2567777777655444346
Q ss_pred eeEEEEeCC-CCCCcC--CCCHHHHHHHHHH
Q 011570 200 IKGVLITNP-SNPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 200 ~~~i~l~~P-~NPtG~--~~~~~~l~~i~~~ 227 (483)
+..+| +|. ..+.+. -.+.++++++.+.
T Consensus 97 iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~v 126 (260)
T 3un1_A 97 IDSLV-NNAGVFLAKPFVEMTQEDYDHNLGV 126 (260)
T ss_dssp CCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 67554 444 222222 3466777766653
No 446
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=26.75 E-value=1.6e+02 Score=27.14 Aligned_cols=61 Identities=13% Similarity=0.083 Sum_probs=0.0
Q ss_pred EEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc
Q 011570 168 LVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK 231 (483)
Q Consensus 168 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~ 231 (483)
+.++..+-..+..+|.+.+++.++...+. .+..|+++ -++=-+..++.+|..++++.+.+.
T Consensus 8 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 8 SAALTTPFKTDGTVDIDAMIAHARRCLSN--GCDSVTLF-GTTGEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHT--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
No 447
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=26.69 E-value=3e+02 Score=24.83 Aligned_cols=30 Identities=20% Similarity=0.153 Sum_probs=18.1
Q ss_pred CcEEEeCChhHHHH-HHHHHhcCCCCeEEEeC
Q 011570 120 DRIVMSGGATGAHE-TVAFCLADPGDAFLVPT 150 (483)
Q Consensus 120 ~~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~ 150 (483)
..++||.|+ .+|- .+...|.+.|..|++..
T Consensus 10 k~~lVTGas-~GIG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 10 PVALVTGAA-KRLGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CEEEETTCS-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHHHHHHHHHCCCeEEEEc
Confidence 345555544 4454 44466778888777654
No 448
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=26.68 E-value=3.2e+02 Score=23.82 Aligned_cols=95 Identities=8% Similarity=0.140 Sum_probs=49.3
Q ss_pred CCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 119 PDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 119 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
...++||.|+...=..+...|.+.|..|++..-.-. .... +...+..++ -|.+.+++++++..++-.
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-----~~~~-~~~~~~~D~-------~d~~~~~~~~~~~~~~~g 73 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFT-----QEQY-PFATEVMDV-------ADAAQVAQVCQRLLAETE 73 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCC-----SSCC-SSEEEECCT-------TCHHHHHHHHHHHHHHCS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchh-----hhcC-CceEEEcCC-------CCHHHHHHHHHHHHHHcC
Confidence 345666655544334455667778887776543221 1122 433333332 256777777766544444
Q ss_pred ceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 199 RIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 199 ~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
++..+| +|.. .+.+. -.+.+++++..+.
T Consensus 74 ~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~ 104 (250)
T 2fwm_X 74 RLDALV-NAAGILRMGATDQLSKEDWQQTFAV 104 (250)
T ss_dssp CCCEEE-ECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred CCCEEE-ECCCcCCCCCcccCCHHHHHHHHHH
Confidence 566544 4442 22222 2466677766653
No 449
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=26.68 E-value=2e+02 Score=26.30 Aligned_cols=99 Identities=18% Similarity=0.249 Sum_probs=0.0
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCCh---hHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEee
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGGA---TGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVV 172 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~ 172 (483)
..+-|..+.+...+..+ ..--|+++.|+ .+++..+-.+---.-|.|++..|.|..
T Consensus 52 s~~Er~~v~~~~~~~~~-----gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~----------------- 109 (291)
T 3a5f_A 52 TETERKETIKFVIDKVN-----KRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYYNK----------------- 109 (291)
T ss_dssp CHHHHHHHHHHHHHHHT-----TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSC-----------------
T ss_pred CHHHHHHHHHHHHHHhC-----CCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCCCC-----------------
Q ss_pred cCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHH
Q 011570 173 CDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVS 226 (483)
Q Consensus 173 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~ 226 (483)
.+.+.+.+..+...+.. +...+++++|.. ||..++.+.+.+|++
T Consensus 110 --------~s~~~l~~~f~~ia~a~-~lPiilYn~P~~-tg~~l~~~~~~~La~ 153 (291)
T 3a5f_A 110 --------TTQKGLVKHFKAVSDAV-STPIIIYNVPGR-TGLNITPGTLKELCE 153 (291)
T ss_dssp --------CCHHHHHHHC-CTGGGC-CSCEEEEECHHH-HSCCCCHHHHHHHTT
T ss_pred --------CCHHHHHHHHHHHHHhc-CCCEEEEeCccc-cCCCCCHHHHHHHHc
No 450
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=26.66 E-value=3.6e+02 Score=24.36 Aligned_cols=102 Identities=15% Similarity=0.103 Sum_probs=50.9
Q ss_pred CCCcEEEeCChh-HHHH-HHHHHhcCCCCeEEEeCCCCcC---hHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHH
Q 011570 118 DPDRIVMSGGAT-GAHE-TVAFCLADPGDAFLVPTPYYPG---FDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEK 192 (483)
Q Consensus 118 ~~~~i~it~G~~-~al~-~~~~~l~~~gd~Vlv~~P~y~~---~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~ 192 (483)
+...++||.|++ .+|- .+...|.+.|..|++..-.-.. ........ |. +..+..|- -|.+.+++++++
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~Dv-----~d~~~v~~~~~~ 101 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-GV-KLTVPCDV-----SDAESVDNMFKV 101 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-TC-CEEEECCT-----TCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CC-eEEEEcCC-----CCHHHHHHHHHH
Confidence 345677777653 2333 3445677788887766543211 11122222 32 34444442 256777777766
Q ss_pred HHhcCCceeEEEEeCCC-CCC----c--CCCCHHHHHHHHHH
Q 011570 193 AQESNIRIKGVLITNPS-NPL----G--TFLDRETLKDIVSF 227 (483)
Q Consensus 193 ~~~~~~~~~~i~l~~P~-NPt----G--~~~~~~~l~~i~~~ 227 (483)
..++-.++..+ ++|.. .+. + .-.+.+++++..+.
T Consensus 102 ~~~~~g~iD~l-VnnAG~~~~~~~~~~~~~~~~~~~~~~~~v 142 (296)
T 3k31_A 102 LAEEWGSLDFV-VHAVAFSDKNELKGRYVDTSLGNFLTSMHI 142 (296)
T ss_dssp HHHHHSCCSEE-EECCCCCCHHHHTSCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCCEE-EECCCcCCcccccCChhhCCHHHHHHHHHH
Confidence 54443356644 44442 211 1 12455666665553
No 451
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=26.54 E-value=3.1e+02 Score=23.57 Aligned_cols=99 Identities=18% Similarity=0.194 Sum_probs=47.0
Q ss_pred EEEeCChhHHHHHHHHHhcCCCCeEEEe-CCCCcChHHH---HhhhcCcEEEE-eecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 122 IVMSGGATGAHETVAFCLADPGDAFLVP-TPYYPGFDRD---LRWRTGVQLVP-VVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~gd~Vlv~-~P~y~~~~~~---~~~~~G~~~~~-v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
++||.|+...=..+...|.+.|..|++. ...-...... +... |.++.. +..|- -|.+.+++.+++..+.
T Consensus 4 vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 77 (245)
T 2ph3_A 4 ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR-GSPLVAVLGANL-----LEAEAATALVHQAAEV 77 (245)
T ss_dssp EEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT-TCSCEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCceEEEEeccC-----CCHHHHHHHHHHHHHh
Confidence 5555544433334446677888887765 4332222111 2222 444444 44432 2567777776654333
Q ss_pred CCceeEEEEeCCCCCCc--CCCCHHHHHHHHH
Q 011570 197 NIRIKGVLITNPSNPLG--TFLDRETLKDIVS 226 (483)
Q Consensus 197 ~~~~~~i~l~~P~NPtG--~~~~~~~l~~i~~ 226 (483)
-.++..||.+-...+.+ .-.+.+++++..+
T Consensus 78 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (245)
T 2ph3_A 78 LGGLDTLVNNAGITRDTLLVRMKDEDWEAVLE 109 (245)
T ss_dssp HTCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence 23566555432222222 1235555555554
No 452
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=26.49 E-value=2.4e+02 Score=25.08 Aligned_cols=95 Identities=14% Similarity=0.107 Sum_probs=47.2
Q ss_pred EEEeCChhHHHHHHHHHhcCC--CCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 122 IVMSGGATGAHETVAFCLADP--GDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 122 i~it~G~~~al~~~~~~l~~~--gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
|+||.|+...=..+...|.+. |..|.+..-.-..... +... +++++...+. |.+.+.++++ +
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-l~~~-~~~~~~~D~~-------d~~~l~~~~~-------~ 66 (287)
T 2jl1_A 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST-LADQ-GVEVRHGDYN-------QPESLQKAFA-------G 66 (287)
T ss_dssp EEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH-HHHT-TCEEEECCTT-------CHHHHHHHTT-------T
T ss_pred EEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH-Hhhc-CCeEEEeccC-------CHHHHHHHHh-------c
Confidence 566655333324455666666 7666654322222222 2222 6666554432 5677777764 4
Q ss_pred eeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCc
Q 011570 200 IKGVLITNPSNPLGTFLDRETLKDIVSFINEKNI 233 (483)
Q Consensus 200 ~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~ 233 (483)
+..|+.+...++. .-....-...+++.|.+.++
T Consensus 67 ~d~vi~~a~~~~~-~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 67 VSKLLFISGPHYD-NTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp CSEEEECCCCCSC-HHHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEcCCCCcC-chHHHHHHHHHHHHHHHcCC
Confidence 5666655332221 00012234667777877664
No 453
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=26.48 E-value=3.9e+02 Score=24.69 Aligned_cols=99 Identities=16% Similarity=0.160 Sum_probs=0.0
Q ss_pred cHHHHHHHHHHHHhhhCCCCCcCCCcEEEeCC---hhHHHHHHHHHhcCCC-CeEEEeCCCCcChHHHHhhhcCcEEEEe
Q 011570 96 LPEFRNAVAKFMGKVRGNRITFDPDRIVMSGG---ATGAHETVAFCLADPG-DAFLVPTPYYPGFDRDLRWRTGVQLVPV 171 (483)
Q Consensus 96 ~~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G---~~~al~~~~~~l~~~g-d~Vlv~~P~y~~~~~~~~~~~G~~~~~v 171 (483)
..+-|.++.+...+..+ ..--|+++.| ..+++..+-.+---.+ |.|++..|.|..
T Consensus 58 s~~Er~~v~~~~~~~~~-----grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~---------------- 116 (311)
T 3h5d_A 58 THDEELELFAAVQKVVN-----GRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNK---------------- 116 (311)
T ss_dssp CHHHHHHHHHHHHHHSC-----SSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCCSSC----------------
T ss_pred CHHHHHHHHHHHHHHhC-----CCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCC----------------
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHH
Q 011570 172 VCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVS 226 (483)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~ 226 (483)
.+.+.+.+..+...+.. +..++++++|.. ||..++.+.+.+|++
T Consensus 117 ---------~s~~~l~~~f~~va~a~-~lPiilYn~P~~-tg~~l~~~~~~~La~ 160 (311)
T 3h5d_A 117 ---------PSQEGMYQHFKAIADAS-DLPIIIYNIPGR-VVVELTPETMLRLAD 160 (311)
T ss_dssp ---------CCHHHHHHHHHHHHHSC-SSCEEEEECHHH-HSSCCCHHHHHHHHT
T ss_pred ---------CCHHHHHHHHHHHHHhC-CCCEEEEecccc-cCCCCCHHHHHHHhc
No 454
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=26.44 E-value=3e+02 Score=24.37 Aligned_cols=81 Identities=17% Similarity=0.072 Sum_probs=39.7
Q ss_pred cEEEeCChhHHHH-HHHHHhcCCCCeEEEeCC-CCcChHHHHhhh---cCcEEEEeecCCCCCcccCH----HHHHHHHH
Q 011570 121 RIVMSGGATGAHE-TVAFCLADPGDAFLVPTP-YYPGFDRDLRWR---TGVQLVPVVCDSSNDFKVTM----EALEAAYE 191 (483)
Q Consensus 121 ~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P-~y~~~~~~~~~~---~G~~~~~v~~~~~~~~~~d~----~~l~~~i~ 191 (483)
.++||.| +.+|- .+...|.+.|..|++..- .-.......... .|.++..+..|-. |. +.+++.++
T Consensus 13 ~~lVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~ 86 (276)
T 1mxh_A 13 AAVITGG-ARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS-----LSSSLLDCCEDIID 86 (276)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCS-----SSTTHHHHHHHHHH
T ss_pred EEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCC-----CccccHHHHHHHHH
Confidence 4555544 44554 444667788888777643 222222222111 1555555555432 34 66666665
Q ss_pred HHHhcCCceeEEEEeCC
Q 011570 192 KAQESNIRIKGVLITNP 208 (483)
Q Consensus 192 ~~~~~~~~~~~i~l~~P 208 (483)
+..++-.++..+ ++|.
T Consensus 87 ~~~~~~g~id~l-v~nA 102 (276)
T 1mxh_A 87 CSFRAFGRCDVL-VNNA 102 (276)
T ss_dssp HHHHHHSCCCEE-EECC
T ss_pred HHHHhcCCCCEE-EECC
Confidence 443332356644 4444
No 455
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=26.30 E-value=2.5e+02 Score=26.80 Aligned_cols=25 Identities=12% Similarity=0.260 Sum_probs=16.6
Q ss_pred HHHhcCeEeeCCCCCCCCCCCEEEEEec
Q 011570 389 IINEVKLNVSPGSSFHCPNPGWFRVCFA 416 (483)
Q Consensus 389 Ll~~~gV~v~pg~~f~~~~~~~iRis~~ 416 (483)
+..+.||....|++|...+. |++-+
T Consensus 293 ~~~~~~~~~k~g~w~~~~~~---~~~~g 317 (366)
T 1xp8_A 293 LAADMDIIKKAGSFYSYGDE---RIGQG 317 (366)
T ss_dssp HHHHTTSSEEETTEEESSSS---EEEES
T ss_pred HHHHhCeeeccCceeeECCe---Eecch
Confidence 44577998888988876432 45443
No 456
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=26.09 E-value=3.5e+02 Score=24.08 Aligned_cols=102 Identities=16% Similarity=0.198 Sum_probs=52.3
Q ss_pred cCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 117 FDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 117 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
++...++||.|+...=..+...|.+.|..|++..-. ...... +... |.++..+..|- -|.+.+++..+..
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~ 101 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG-GGSAEAVVADL-----ADLEGAANVAEEL 101 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT-TCEEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc-CCcEEEEEecC-----CCHHHHHHHHHHH
Confidence 344456666665543344556677889888776532 222222 2222 66777777653 2455565553322
Q ss_pred HhcCCceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 194 QESNIRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
... .++..+ ++|.. .+.+. -.+.+++++..+.
T Consensus 102 ~~~-g~iD~l-v~nAg~~~~~~~~~~~~~~~~~~~~v 136 (273)
T 3uf0_A 102 AAT-RRVDVL-VNNAGIIARAPAEEVSLGRWREVLTV 136 (273)
T ss_dssp HHH-SCCCEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred Hhc-CCCcEE-EECCCCCCCCCchhCCHHHHHHHHHH
Confidence 222 356644 44442 22121 2466777766654
No 457
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=26.02 E-value=2e+02 Score=25.82 Aligned_cols=81 Identities=17% Similarity=0.197 Sum_probs=42.1
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCC-CCcChHH---HHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHh
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTP-YYPGFDR---DLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQE 195 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P-~y~~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 195 (483)
..++||.|+...=..+...|.+.|..|++..- .-..... .+... |.++..+..|-. |.+.+++++++..+
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~-----d~~~v~~~~~~~~~ 103 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL-GARVIFLRADLA-----DLSSHQATVDAVVA 103 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT-TCCEEEEECCTT-----SGGGHHHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEecCC-----CHHHHHHHHHHHHH
Confidence 34666655543334455667788988776542 2222222 22222 666766666532 45556665554433
Q ss_pred cCCceeEEEEe
Q 011570 196 SNIRIKGVLIT 206 (483)
Q Consensus 196 ~~~~~~~i~l~ 206 (483)
+-.++..+|.+
T Consensus 104 ~~g~iD~lvnn 114 (280)
T 4da9_A 104 EFGRIDCLVNN 114 (280)
T ss_dssp HHSCCCEEEEE
T ss_pred HcCCCCEEEEC
Confidence 33356655543
No 458
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=25.89 E-value=3.8e+02 Score=26.69 Aligned_cols=98 Identities=23% Similarity=0.313 Sum_probs=51.7
Q ss_pred cEEEeCChhHHHHH-HHHHhcCCCC-eEEEeCCC---Cc---ChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHH
Q 011570 121 RIVMSGGATGAHET-VAFCLADPGD-AFLVPTPY---YP---GFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEK 192 (483)
Q Consensus 121 ~i~it~G~~~al~~-~~~~l~~~gd-~Vlv~~P~---y~---~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~ 192 (483)
.+++.+|++.+|-. +...|.+.|. +|++..-. -. .....+... |.++..+.+|- -|.+.+.+.+.+
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~-g~~v~~~~~Dv-----td~~~v~~~~~~ 313 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL-GVRVTIAACDA-----ADREALAALLAE 313 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHHHHHT
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc-CCeEEEEEccC-----CCHHHHHHHHHH
Confidence 44444444445443 4455667775 55553321 11 122233444 88888888764 367888888876
Q ss_pred HHhcCCceeEEEEeCCC-C-CCcC--CCCHHHHHHHHH
Q 011570 193 AQESNIRIKGVLITNPS-N-PLGT--FLDRETLKDIVS 226 (483)
Q Consensus 193 ~~~~~~~~~~i~l~~P~-N-PtG~--~~~~~~l~~i~~ 226 (483)
..+. .++..|| +|.. . ..+. -++.++++++.+
T Consensus 314 i~~~-g~ld~vV-h~AGv~~~~~~l~~~t~e~~~~vl~ 349 (496)
T 3mje_A 314 LPED-APLTAVF-HSAGVAHDDAPVADLTLGQLDALMR 349 (496)
T ss_dssp CCTT-SCEEEEE-ECCCCCCSCCCTTTCCHHHHHHHHH
T ss_pred HHHh-CCCeEEE-ECCcccCCCCCcccCCHHHHHHHHH
Confidence 4433 3565444 4432 2 2232 246666666654
No 459
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=25.81 E-value=1.8e+02 Score=26.65 Aligned_cols=57 Identities=18% Similarity=0.154 Sum_probs=39.8
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc---CcEEEE
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK---NIHLVC 237 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~---~~~iI~ 237 (483)
+..+|.+.+++.++...+. .+..++++ -++=-+..++.+|+.++++.+.+. .+.||.
T Consensus 16 dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 16 DGGVDWKSLEKLVEWHIEQ--GTNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp TSCBCHHHHHHHHHHHHHH--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHC--CCCEEEEC-ccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 4579999999988766554 45666554 344445678999999999988663 345554
No 460
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=25.72 E-value=3.7e+02 Score=24.24 Aligned_cols=109 Identities=15% Similarity=0.163 Sum_probs=59.7
Q ss_pred cCCCcEEEeCChhHHHHHHHHHhcCCC--CeEEEeCCCCcChHHHHhhh-cCcEEEEeecCCCCCcccCHHHHHHHHHHH
Q 011570 117 FDPDRIVMSGGATGAHETVAFCLADPG--DAFLVPTPYYPGFDRDLRWR-TGVQLVPVVCDSSNDFKVTMEALEAAYEKA 193 (483)
Q Consensus 117 ~~~~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~P~y~~~~~~~~~~-~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 193 (483)
++++.|+++.-+..+...+..++..|. ..|+........-....... ....+.-+.-+. +-.+.++..++..+..
T Consensus 154 id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~~~~~~~~~~~~Pvl~~hG~~--D~~Vp~~~~~~~~~~L 231 (285)
T 4fhz_A 154 LPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPERLAEEARSKPPVLLVHGDA--DPVVPFADMSLAGEAL 231 (285)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCHHHHHHHCCCCCCEEEEEETT--CSSSCTHHHHHHHHHH
T ss_pred CCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCchhhhhhhhhcCcccceeeCC--CCCcCHHHHHHHHHHH
Confidence 688999987777766666555555554 33444443332222222211 133444443332 2245666666555554
Q ss_pred HhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc
Q 011570 194 QESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK 231 (483)
Q Consensus 194 ~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~ 231 (483)
.+.+.++...++ |. .|.-++.+++..+.++.+++
T Consensus 232 ~~~g~~~~~~~y--~g--~gH~i~~~~l~~~~~fL~~~ 265 (285)
T 4fhz_A 232 AEAGFTTYGHVM--KG--TGHGIAPDGLSVALAFLKER 265 (285)
T ss_dssp HHTTCCEEEEEE--TT--CCSSCCHHHHHHHHHHHHHH
T ss_pred HHCCCCEEEEEE--CC--CCCCCCHHHHHHHHHHHHHH
Confidence 455555554444 32 34557889999999988764
No 461
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=25.68 E-value=2.7e+02 Score=24.46 Aligned_cols=80 Identities=23% Similarity=0.320 Sum_probs=42.6
Q ss_pred cEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 121 RIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 121 ~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
.++||. ++.+|- .+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.++...++
T Consensus 7 ~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 79 (260)
T 2qq5_A 7 VCVVTG-ASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL-GGQCVPVVCDS-----SQESEVRSLFEQVDRE 79 (260)
T ss_dssp EEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-SSEEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred EEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc-CCceEEEECCC-----CCHHHHHHHHHHHHHh
Confidence 455554 444554 44466778888887764332222221 2222 66776666653 2567777777654332
Q ss_pred -CCceeEEEEeCC
Q 011570 197 -NIRIKGVLITNP 208 (483)
Q Consensus 197 -~~~~~~i~l~~P 208 (483)
..++..+| +|.
T Consensus 80 ~~g~id~lv-nnA 91 (260)
T 2qq5_A 80 QQGRLDVLV-NNA 91 (260)
T ss_dssp HTTCCCEEE-ECC
T ss_pred cCCCceEEE-ECC
Confidence 23566444 444
No 462
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=25.67 E-value=2e+02 Score=21.20 Aligned_cols=91 Identities=15% Similarity=0.077 Sum_probs=50.5
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCC-CeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 120 DRIVMSGGATGAHETVAFCLADPG-DAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~g-d~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
..|+++.++.-+..++ ..|...| ..|.+.+..-..... +... |...+..... +.+.+++.+.
T Consensus 6 ~~v~I~G~G~iG~~~~-~~l~~~g~~~v~~~~r~~~~~~~-~~~~-~~~~~~~d~~-------~~~~~~~~~~------- 68 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIA-ALLKTSSNYSVTVADHDLAALAV-LNRM-GVATKQVDAK-------DEAGLAKALG------- 68 (118)
T ss_dssp EEEEEECCSHHHHHHH-HHHHHCSSEEEEEEESCHHHHHH-HHTT-TCEEEECCTT-------CHHHHHHHTT-------
T ss_pred CeEEEECCCHHHHHHH-HHHHhCCCceEEEEeCCHHHHHH-HHhC-CCcEEEecCC-------CHHHHHHHHc-------
Confidence 3577765555554444 4455566 567666654332222 2222 6666544322 4566766653
Q ss_pred ceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEE
Q 011570 199 RIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLV 236 (483)
Q Consensus 199 ~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI 236 (483)
+...|+.+.|.. .-..+++.|.+.|...+
T Consensus 69 ~~d~vi~~~~~~---------~~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 69 GFDAVISAAPFF---------LTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp TCSEEEECSCGG---------GHHHHHHHHHHTTCEEE
T ss_pred CCCEEEECCCch---------hhHHHHHHHHHhCCCEE
Confidence 567777776422 13677788888887654
No 463
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=25.45 E-value=1.9e+02 Score=27.25 Aligned_cols=57 Identities=19% Similarity=0.219 Sum_probs=33.9
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc---CcEEEE
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK---NIHLVC 237 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~---~~~iI~ 237 (483)
+..+|.+.+++.++...+. .+..|+++ -++=-+..++.+|..++++.+.+. .+.||.
T Consensus 49 dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 108 (332)
T 2r8w_A 49 AGRVDIEAFSALIARLDAA--EVDSVGIL-GSTGIYMYLTREERRRAIEAAATILRGRRTLMA 108 (332)
T ss_dssp TCCBCHHHHHHHHHHHHHH--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3467888887777655444 34555543 233334457888888877776553 345544
No 464
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=25.43 E-value=1.9e+02 Score=26.59 Aligned_cols=51 Identities=12% Similarity=0.095 Sum_probs=36.7
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK 231 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~ 231 (483)
+..+|.+.+++.++...+. .+..|+++ -++=-+..++.+|..++++.+.+.
T Consensus 16 dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~ 66 (292)
T 2ojp_A 16 KGNVCRASLKKLIDYHVAS--GTSAIVSV-GTTGESATLNHDEHADVVMMTLDL 66 (292)
T ss_dssp TSCBCHHHHHHHHHHHHHH--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccchhhCCHHHHHHHHHHHHHH
Confidence 4579999999988766554 45666654 334345568999999999988653
No 465
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=25.39 E-value=3.7e+02 Score=24.47 Aligned_cols=76 Identities=20% Similarity=0.226 Sum_probs=37.7
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
-.|+||.|+...=..+...|.+.|..|++..-.-...........++.++...+ -|.+.+++++++. +
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl-------~d~~~~~~~~~~~-----~ 88 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSV-------TDAGLLERAFDSF-----K 88 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCT-------TCHHHHHHHHHHH-----C
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeC-------CCHHHHHHHHhhc-----C
Confidence 357777554433344556677778777765432111111111111444443332 2577788777643 4
Q ss_pred eeEEEEeC
Q 011570 200 IKGVLITN 207 (483)
Q Consensus 200 ~~~i~l~~ 207 (483)
+.+||-+-
T Consensus 89 ~D~vih~A 96 (330)
T 2pzm_A 89 PTHVVHSA 96 (330)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 56665553
No 466
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=25.26 E-value=1.1e+02 Score=26.94 Aligned_cols=116 Identities=8% Similarity=0.095 Sum_probs=64.5
Q ss_pred hHHHHHHHHHhcCCCCeEEEeCCCCcCh---HHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 011570 129 TGAHETVAFCLADPGDAFLVPTPYYPGF---DRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLI 205 (483)
Q Consensus 129 ~~al~~~~~~l~~~gd~Vlv~~P~y~~~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l 205 (483)
++++..+.+ +...|..|++..|.-..- ....... |.....++++.. +++.+.+. .+...|++
T Consensus 43 T~Llr~~~r-~~~~g~kvli~kp~~D~R~~~~~I~Sr~-G~~~~a~~v~~~-------~di~~~i~------~~~dvV~I 107 (219)
T 3e2i_A 43 EELIRRLRR-GIYAKQKVVVFKPAIDDRYHKEKVVSHN-GNAIEAINISKA-------SEIMTHDL------TNVDVIGI 107 (219)
T ss_dssp HHHHHHHHH-HHHTTCCEEEEEEC-----------CBT-TBCCEEEEESSG-------GGGGGSCC------TTCSEEEE
T ss_pred HHHHHHHHH-HHHcCCceEEEEeccCCcchhhhHHHhc-CCceeeEEeCCH-------HHHHHHHh------cCCCEEEE
Confidence 446566544 445677788887764321 1233333 665555554422 11211111 15567777
Q ss_pred eCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhhhccccCCCeEEEE
Q 011570 206 TNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIIDQDIACNRNLIHIV 273 (483)
Q Consensus 206 ~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~~~~~~~~~~vi~~ 273 (483)
.- ++.++.+.++.+.+++ ..|+.||+=.--.+ |.+ .+|.+...+.. -.+.+.-+
T Consensus 108 DE-----aQFf~~~~v~~l~~la-~~gi~Vi~~GLd~D--F~~-~~F~~~~~Ll~-----~Ad~v~kl 161 (219)
T 3e2i_A 108 DE-----VQFFDDEIVSIVEKLS-ADGHRVIVAGLDMD--FRG-EPFEPMPKLMA-----VSEQVTKL 161 (219)
T ss_dssp CC-----GGGSCTHHHHHHHHHH-HTTCEEEEEEESBC--TTS-CBCTTHHHHHH-----HCSEEEEE
T ss_pred ec-----hhcCCHHHHHHHHHHH-HCCCEEEEeecccc--ccc-CCCccHHHHHH-----hcceEEEe
Confidence 74 4447777777777777 57999998776555 566 67777776655 23555544
No 467
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=25.17 E-value=2.2e+02 Score=25.50 Aligned_cols=100 Identities=16% Similarity=0.194 Sum_probs=49.4
Q ss_pred cEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHHHHhhhc-CcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 121 RIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDRDLRWRT-GVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 121 ~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~-G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
.++|| |++.+|- .+...|.+.|..|++..-.-........... ..++..+..|- -|.+.++++++...++-.
T Consensus 23 ~vlVT-Gas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 96 (272)
T 2nwq_A 23 TLFIT-GATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDV-----RDRAAMSAAVDNLPEEFA 96 (272)
T ss_dssp EEEES-STTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCT-----TCHHHHHHHHHTCCGGGS
T ss_pred EEEEe-CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHHhC
Confidence 45555 4444443 4446677788887776443222222222221 12455555542 267788887765433323
Q ss_pred ceeEEEEeCCCC-C-CcC--CCCHHHHHHHHHH
Q 011570 199 RIKGVLITNPSN-P-LGT--FLDRETLKDIVSF 227 (483)
Q Consensus 199 ~~~~i~l~~P~N-P-tG~--~~~~~~l~~i~~~ 227 (483)
++..+| +|..- + .+. -.+.++++++.+.
T Consensus 97 ~iD~lv-nnAG~~~~~~~~~~~~~~~~~~~~~v 128 (272)
T 2nwq_A 97 TLRGLI-NNAGLALGTDPAQSCDLDDWDTMVDT 128 (272)
T ss_dssp SCCEEE-ECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCCCcccCCHHHHHHHHHH
Confidence 556444 44421 1 121 2456666666553
No 468
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=24.99 E-value=1.1e+02 Score=30.09 Aligned_cols=27 Identities=15% Similarity=0.272 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 217 DRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 217 ~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
+.++++++++.|+++|+-||.|-++..
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~NH 108 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYNH 108 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCc
Confidence 679999999999999999999998754
No 469
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=24.98 E-value=2.6e+02 Score=23.69 Aligned_cols=72 Identities=11% Similarity=-0.037 Sum_probs=35.6
Q ss_pred cEEEeCChhHHHHHHHHHhc-CCCCeEEEeCCCCc-ChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 121 RIVMSGGATGAHETVAFCLA-DPGDAFLVPTPYYP-GFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~-~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
.|+||.|+...=..+...|. +.|..|.+..-.-. .... +... +.++..+..|- -|.+.++++++
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~-~~~~-~~~~~~~~~D~-----~d~~~~~~~~~------- 72 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPP-EIID-HERVTVIEGSF-----QNPGXLEQAVT------- 72 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCH-HHHT-STTEEEEECCT-----TCHHHHHHHHT-------
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchh-hccC-CCceEEEECCC-----CCHHHHHHHHc-------
Confidence 36776654433334445666 68887776543211 1111 1101 33344444332 26778877774
Q ss_pred ceeEEEEe
Q 011570 199 RIKGVLIT 206 (483)
Q Consensus 199 ~~~~i~l~ 206 (483)
++.+||.+
T Consensus 73 ~~d~vv~~ 80 (221)
T 3r6d_A 73 NAEVVFVG 80 (221)
T ss_dssp TCSEEEES
T ss_pred CCCEEEEc
Confidence 45655544
No 470
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=24.96 E-value=1.8e+02 Score=26.64 Aligned_cols=56 Identities=18% Similarity=0.301 Sum_probs=38.2
Q ss_pred CcccCHHHHHHHHHHHHh-cCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc---CcEEE
Q 011570 178 DFKVTMEALEAAYEKAQE-SNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK---NIHLV 236 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~-~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~---~~~iI 236 (483)
+..+|.+.+++.++...+ . .+..|+++ -++=-+..++.+|..++++.+.+. .+.||
T Consensus 18 dg~iD~~~l~~lv~~li~~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi 77 (293)
T 1f6k_A 18 DGTINEKGLRQIIRHNIDKM--KVDGLYVG-GSTGENFMLSTEEKKEIFRIAKDEAKDQIALI 77 (293)
T ss_dssp TSCBCHHHHHHHHHHHHHTS--CCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEE
T ss_pred CCCcCHHHHHHHHHHHHhhC--CCcEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 457999999998877655 4 45666654 233334568999999999888653 35554
No 471
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=24.69 E-value=3.5e+02 Score=24.77 Aligned_cols=89 Identities=16% Similarity=0.184 Sum_probs=49.6
Q ss_pred cEEEeCC---hhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcC
Q 011570 121 RIVMSGG---ATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESN 197 (483)
Q Consensus 121 ~i~it~G---~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 197 (483)
-|+++.| ..+++..+-.+---.-|.|++..|.|... +.+.+.+..+...+.
T Consensus 75 pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-------------------------~~~~l~~~f~~va~a- 128 (300)
T 3eb2_A 75 PVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYFPL-------------------------KDAQIESYFRAIADA- 128 (300)
T ss_dssp CBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSCC-------------------------CHHHHHHHHHHHHHH-
T ss_pred cEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-------------------------CHHHHHHHHHHHHHH-
Confidence 3666555 44666655444322348899999988532 112222222211111
Q ss_pred CceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEcc
Q 011570 198 IRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDE 239 (483)
Q Consensus 198 ~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~De 239 (483)
.+..++++++|.. ||..++.+.+.+|++ -.++.=|=|.
T Consensus 129 ~~lPiilYn~P~~-tg~~l~~~~~~~La~---~pnIvgiKds 166 (300)
T 3eb2_A 129 VEIPVVIYTNPQF-QRSDLTLDVIARLAE---HPRIRYIKDA 166 (300)
T ss_dssp CSSCEEEEECTTT-CSSCCCHHHHHHHHT---STTEEEEEEC
T ss_pred CCCCEEEEECccc-cCCCCCHHHHHHHHc---CCCEEEEEcC
Confidence 1456788888874 899999877777742 2355444444
No 472
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=24.63 E-value=1.3e+02 Score=29.86 Aligned_cols=97 Identities=14% Similarity=0.073 Sum_probs=57.0
Q ss_pred cCCCcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 117 FDPDRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 117 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
+....|+|..|+..+...+ ..|++.|-.|.+.+|....-........+++++.-. | ..+.+.
T Consensus 10 l~~~~vlVvGgG~va~~k~-~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~------~--~~~~l~--------- 71 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKA-RLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGP------F--DETLLD--------- 71 (457)
T ss_dssp CBTCEEEEECCSHHHHHHH-HHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESS------C--CGGGGT---------
T ss_pred CCCCEEEEECCCHHHHHHH-HHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECC------C--CccccC---------
Confidence 4456788888888887776 456677888888888654322222211245544311 1 222221
Q ss_pred CCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEE-EEcccc
Q 011570 197 NIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHL-VCDEIY 241 (483)
Q Consensus 197 ~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~i-I~Deay 241 (483)
...+ ++..|++|. .-..+++.|++.|+++ ++|+.-
T Consensus 72 --~~~l-Vi~at~~~~-------~n~~i~~~a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 72 --SCWL-AIAATDDDT-------VNQRVSDAAESRRIFCNVVDAPK 107 (457)
T ss_dssp --TCSE-EEECCSCHH-------HHHHHHHHHHHTTCEEEETTCTT
T ss_pred --CccE-EEEcCCCHH-------HHHHHHHHHHHcCCEEEECCCcc
Confidence 2344 444566541 2467888999999986 577763
No 473
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=24.48 E-value=3.2e+02 Score=25.20 Aligned_cols=29 Identities=17% Similarity=0.159 Sum_probs=17.7
Q ss_pred cEEEeCChhHHH-HHHHHHhcCCCCeEEEeC
Q 011570 121 RIVMSGGATGAH-ETVAFCLADPGDAFLVPT 150 (483)
Q Consensus 121 ~i~it~G~~~al-~~~~~~l~~~gd~Vlv~~ 150 (483)
.++||.| +.+| ..+...|.+.|..|++..
T Consensus 48 ~~lVTGa-s~GIG~aia~~La~~G~~Vv~~~ 77 (328)
T 2qhx_A 48 VALVTGA-AKRLGRSIAEGLHAEGYAVCLHY 77 (328)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECC-CCHHHHHHHHHHHHCCCEEEEEc
Confidence 4555544 4444 444566778888877654
No 474
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=24.46 E-value=1.2e+02 Score=27.38 Aligned_cols=102 Identities=13% Similarity=0.127 Sum_probs=50.4
Q ss_pred EEEeCChh-HHHHHHHHHhcCC-CCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 122 IVMSGGAT-GAHETVAFCLADP-GDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 122 i~it~G~~-~al~~~~~~l~~~-gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
|+||.|+. -+-. ++..|.+. |..|.+..-.-..... +.. .+++++...+. |.+.+.++++ +
T Consensus 3 ilVtGatG~iG~~-l~~~L~~~~g~~V~~~~R~~~~~~~-~~~-~~v~~~~~D~~-------d~~~l~~~~~-------~ 65 (289)
T 3e48_A 3 IMLTGATGHLGTH-ITNQAIANHIDHFHIGVRNVEKVPD-DWR-GKVSVRQLDYF-------NQESMVEAFK-------G 65 (289)
T ss_dssp EEEETTTSHHHHH-HHHHHHHTTCTTEEEEESSGGGSCG-GGB-TTBEEEECCTT-------CHHHHHHHTT-------T
T ss_pred EEEEcCCchHHHH-HHHHHhhCCCCcEEEEECCHHHHHH-hhh-CCCEEEEcCCC-------CHHHHHHHHh-------C
Confidence 66665433 3333 33445554 7666554322111111 112 26666654432 6778887764 4
Q ss_pred eeEEEEeCCC-CCCcCCCCHHHHHHHHHHHhhcCc-EEEEccccc
Q 011570 200 IKGVLITNPS-NPLGTFLDRETLKDIVSFINEKNI-HLVCDEIYA 242 (483)
Q Consensus 200 ~~~i~l~~P~-NPtG~~~~~~~l~~i~~~a~~~~~-~iI~Deay~ 242 (483)
+..||.+... ++.. ......+.+++.|++.++ .||.=..|+
T Consensus 66 ~d~vi~~a~~~~~~~--~~~~~~~~l~~aa~~~gv~~iv~~Ss~~ 108 (289)
T 3e48_A 66 MDTVVFIPSIIHPSF--KRIPEVENLVYAAKQSGVAHIIFIGYYA 108 (289)
T ss_dssp CSEEEECCCCCCSHH--HHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred CCEEEEeCCCCccch--hhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence 5666655432 2211 122446788888888773 344333343
No 475
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=24.38 E-value=4.3e+02 Score=24.48 Aligned_cols=101 Identities=20% Similarity=0.172 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCCh---hHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeec
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGA---TGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~ 173 (483)
.+-|..+.+..-+..+ ..--|+++.|+ .+++..+-.+---.-|.|++..|.|..- |
T Consensus 63 ~~Er~~v~~~~~~~~~-----grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~k---------------p- 121 (318)
T 3qfe_A 63 REERAQLIATARKAVG-----PDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYFGK---------------A- 121 (318)
T ss_dssp HHHHHHHHHHHHHHHC-----TTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC------------------C-
T ss_pred HHHHHHHHHHHHHHhC-----CCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCC---------------C-
Confidence 4445555555443321 12357777664 3555554433322348899999977420 0
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHH
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVS 226 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~ 226 (483)
.+.+.+.+..+...+. .+..++++++|..-+|..++.+.+.+|++
T Consensus 122 -------~~~~~l~~~f~~ia~a-~~lPiilYn~P~~t~g~~l~~~~~~~La~ 166 (318)
T 3qfe_A 122 -------TTPPVIKSFFDDVSCQ-SPLPVVIYNFPGVCNGIDLDSDMITTIAR 166 (318)
T ss_dssp -------CCHHHHHHHHHHHHHH-CSSCEEEEECCC----CCCCHHHHHHHHH
T ss_pred -------CCHHHHHHHHHHHHhh-CCCCEEEEeCCcccCCCCCCHHHHHHHHh
Confidence 0112222222211111 24567888888775699999777777654
No 476
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=24.03 E-value=2e+02 Score=23.72 Aligned_cols=53 Identities=13% Similarity=0.112 Sum_probs=35.0
Q ss_pred cCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcC
Q 011570 164 TGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKN 232 (483)
Q Consensus 164 ~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~ 232 (483)
.|.+++.+..+ .+++++.+++.+. ++++|.++.-.. ...+.+.++++..++.+
T Consensus 45 ~G~eVi~lG~~------~p~e~lv~aa~~~-----~~diV~lS~~~~-----~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 45 AGFEVVYTGLR------QTPEQVAMAAVQE-----DVDVIGVSILNG-----AHLHLMKRLMAKLRELG 97 (161)
T ss_dssp TTCEEECCCSB------CCHHHHHHHHHHT-----TCSEEEEEESSS-----CHHHHHHHHHHHHHHTT
T ss_pred CCCEEEECCCC------CCHHHHHHHHHhc-----CCCEEEEEeech-----hhHHHHHHHHHHHHhcC
Confidence 38888776543 5678888777663 677777764332 24566788888777654
No 477
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=24.00 E-value=3.7e+02 Score=23.67 Aligned_cols=82 Identities=15% Similarity=0.122 Sum_probs=41.9
Q ss_pred CcEEEeCC-hhHHHH-HHHHHhcCCCCeEEEeCCCCcC-hHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 120 DRIVMSGG-ATGAHE-TVAFCLADPGDAFLVPTPYYPG-FDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 120 ~~i~it~G-~~~al~-~~~~~l~~~gd~Vlv~~P~y~~-~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
..++||.| ++.+|- .+...|.+.|..|++..-.-.. ........ +.++..+..|- -|.+.+++.+++..++
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 81 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDV-----QNEEHLASLAGRVTEA 81 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-CCCceEEEccC-----CCHHHHHHHHHHHHHH
Confidence 45666665 144443 3445677788877766443322 12223332 44444455442 2567777777654443
Q ss_pred CC---ceeEEEEeCC
Q 011570 197 NI---RIKGVLITNP 208 (483)
Q Consensus 197 ~~---~~~~i~l~~P 208 (483)
-. ++.. +++|.
T Consensus 82 ~g~~~~iD~-lv~nA 95 (269)
T 2h7i_A 82 IGAGNKLDG-VVHSI 95 (269)
T ss_dssp HCTTCCEEE-EEECC
T ss_pred hCCCCCceE-EEECC
Confidence 22 5664 44444
No 478
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=23.91 E-value=3.8e+02 Score=23.74 Aligned_cols=92 Identities=15% Similarity=0.146 Sum_probs=45.5
Q ss_pred CcEEEeCChhHHHH-HHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCC
Q 011570 120 DRIVMSGGATGAHE-TVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNI 198 (483)
Q Consensus 120 ~~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 198 (483)
..++||.|+ .+|- .+...|.+.|..|++..-.-... ......+.+++ -|.+.+++.+++..++-.
T Consensus 15 k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~~Dv-------~~~~~v~~~~~~~~~~~g 80 (269)
T 3vtz_A 15 KVAIVTGGS-SGIGLAVVDALVRYGAKVVSVSLDEKSD------VNVSDHFKIDV-------TNEEEVKEAVEKTTKKYG 80 (269)
T ss_dssp CEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCC--C------TTSSEEEECCT-------TCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCchhc------cCceeEEEecC-------CCHHHHHHHHHHHHHHcC
Confidence 345555554 4444 44466778898877654321110 11233333332 256777777765544434
Q ss_pred ceeEEEEeCCC-CCCcC--CCCHHHHHHHHH
Q 011570 199 RIKGVLITNPS-NPLGT--FLDRETLKDIVS 226 (483)
Q Consensus 199 ~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~ 226 (483)
++..+| +|.. .+.+. -.+.++++++.+
T Consensus 81 ~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 110 (269)
T 3vtz_A 81 RIDILV-NNAGIEQYSPLHLTPTEIWRRIID 110 (269)
T ss_dssp CCCEEE-ECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred CCCEEE-ECCCcCCCCCcccCCHHHHHHHHH
Confidence 566544 4442 22221 246666666555
No 479
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=23.82 E-value=3.7e+02 Score=23.52 Aligned_cols=100 Identities=21% Similarity=0.273 Sum_probs=50.0
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
..++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.++...+.
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 88 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE-GLSVTGTVCHV-----GKAEDRERLVAMAVNL 88 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 3466655544333344566777888777654332222221 2222 55565555543 2566777666654333
Q ss_pred CCceeEEEEeCCC-CC-CcC--CCCHHHHHHHHH
Q 011570 197 NIRIKGVLITNPS-NP-LGT--FLDRETLKDIVS 226 (483)
Q Consensus 197 ~~~~~~i~l~~P~-NP-tG~--~~~~~~l~~i~~ 226 (483)
-.++..+| +|.. .+ .+. -.+.++++++.+
T Consensus 89 ~g~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~ 121 (260)
T 2zat_A 89 HGGVDILV-SNAAVNPFFGNIIDATEEVWDKILH 121 (260)
T ss_dssp HSCCCEEE-ECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCCCcccCCHHHHHHHHH
Confidence 23566544 4432 22 222 246666666555
No 480
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=23.81 E-value=1.2e+02 Score=27.92 Aligned_cols=76 Identities=14% Similarity=0.210 Sum_probs=43.9
Q ss_pred CCCCcChHHHHhhhcC-cEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHH
Q 011570 150 TPYYPGFDRDLRWRTG-VQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFI 228 (483)
Q Consensus 150 ~P~y~~~~~~~~~~~G-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a 228 (483)
.|+|....+..... + .+++-+-.+.+ .-++.++++++. .++.+++.+ +| ++.++.+++.+.|
T Consensus 56 ~~vy~sl~el~~~~-~~~DvaIi~vp~~----~~~~~v~ea~~~------Gi~~vVi~t----~G--~~~~~~~~l~~~A 118 (297)
T 2yv2_A 56 VPVYDSVKEALAEH-PEINTSIVFVPAP----FAPDAVYEAVDA------GIRLVVVIT----EG--IPVHDTMRFVNYA 118 (297)
T ss_dssp EEEESSHHHHHHHC-TTCCEEEECCCGG----GHHHHHHHHHHT------TCSEEEECC----CC--CCHHHHHHHHHHH
T ss_pred EeeeCCHHHHhhcC-CCCCEEEEecCHH----HHHHHHHHHHHC------CCCEEEEEC----CC--CCHHHHHHHHHHH
Confidence 44566665554421 2 44433333221 234555555542 567555432 23 3667789999999
Q ss_pred hhcCcEEEEccccc
Q 011570 229 NEKNIHLVCDEIYA 242 (483)
Q Consensus 229 ~~~~~~iI~Deay~ 242 (483)
+++++.++-..+.+
T Consensus 119 ~~~gi~viGPNc~G 132 (297)
T 2yv2_A 119 RQKGATIIGPNCPG 132 (297)
T ss_dssp HHHTCEEECSSSCE
T ss_pred HHcCCEEEcCCCCe
Confidence 99999888777664
No 481
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=23.80 E-value=3.3e+02 Score=23.77 Aligned_cols=16 Identities=19% Similarity=0.310 Sum_probs=7.7
Q ss_pred HHHHhhhcCcEEEEeec
Q 011570 157 DRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 157 ~~~~~~~~G~~~~~v~~ 173 (483)
.+.+... |+..+.++.
T Consensus 78 i~~~~~a-Gadgv~vh~ 93 (230)
T 1tqj_A 78 VEDFAKA-GADIISVHV 93 (230)
T ss_dssp HHHHHHH-TCSEEEEEC
T ss_pred HHHHHHc-CCCEEEECc
Confidence 3444443 555555553
No 482
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=23.69 E-value=6e+02 Score=25.92 Aligned_cols=97 Identities=13% Similarity=0.111 Sum_probs=50.5
Q ss_pred cEEEeCChhHHHHHHH-HHhcCCCCeEEEeCC-CCcChHHHHhhhcCcEEEEeecCCCCCcccCH-HHHHHHHHHHHhcC
Q 011570 121 RIVMSGGATGAHETVA-FCLADPGDAFLVPTP-YYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTM-EALEAAYEKAQESN 197 (483)
Q Consensus 121 ~i~it~G~~~al~~~~-~~l~~~gd~Vlv~~P-~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~-~~l~~~i~~~~~~~ 197 (483)
.+++.+|++.+|-..+ ..|.+.|-+|++.+- .-......+... |.+++.+.. |+ +..++.+++..++-
T Consensus 323 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~-g~~~~~~~~--------Dv~~~~~~~~~~~~~~~ 393 (604)
T 2et6_A 323 KVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAA-GGEAWPDQH--------DVAKDSEAIIKNVIDKY 393 (604)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHT-TCEEEEECC--------CHHHHHHHHHHHHHHHH
T ss_pred CeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhc-CCeEEEEEc--------ChHHHHHHHHHHHHHhc
Confidence 4555555555665444 667788988877642 111122223333 667665543 44 44444444433322
Q ss_pred CceeEEEEeCCC-CCCcC--CCCHHHHHHHHHH
Q 011570 198 IRIKGVLITNPS-NPLGT--FLDRETLKDIVSF 227 (483)
Q Consensus 198 ~~~~~i~l~~P~-NPtG~--~~~~~~l~~i~~~ 227 (483)
.++. ++++|.. ...+. -++.++++++++.
T Consensus 394 G~iD-iLVnNAGi~~~~~~~~~~~~~~~~~~~v 425 (604)
T 2et6_A 394 GTID-ILVNNAGILRDRSFAKMSKQEWDSVQQV 425 (604)
T ss_dssp SCCC-EEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCCC-EEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 3566 4556653 22232 3577888887774
No 483
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=23.65 E-value=47 Score=32.79 Aligned_cols=27 Identities=15% Similarity=0.319 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 217 DRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 217 ~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
+.++++++++.|+++|+-||.|-++-.
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~NH 89 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLINH 89 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecc
Confidence 589999999999999999999999864
No 484
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=23.57 E-value=2.8e+02 Score=27.25 Aligned_cols=105 Identities=16% Similarity=0.161 Sum_probs=53.2
Q ss_pred hhHHHHHHHHHhcCCCCeEEE-eCCCC-cChHHHHhh---hcCcEEEEeecCCCCCcccCHHHH-HHHHHHHHhcCCcee
Q 011570 128 ATGAHETVAFCLADPGDAFLV-PTPYY-PGFDRDLRW---RTGVQLVPVVCDSSNDFKVTMEAL-EAAYEKAQESNIRIK 201 (483)
Q Consensus 128 ~~~al~~~~~~l~~~gd~Vlv-~~P~y-~~~~~~~~~---~~G~~~~~v~~~~~~~~~~d~~~l-~~~i~~~~~~~~~~~ 201 (483)
=|..+..+...+...|.+|++ ..-.| +.....++. ..|+.+...+. ..|+..+ .+++..+..+ ...
T Consensus 113 KTTt~~kLA~~l~~~G~kVllv~~D~~R~aa~eqL~~~~~~~gvpv~~~~~------~~dp~~i~~~al~~a~~~--~~D 184 (443)
T 3dm5_A 113 KTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHIEVFGNPQ------EKDAIKLAKEGVDYFKSK--GVD 184 (443)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEECCCSSTHHHHHHHHHHGGGTCEEECCTT------CCCHHHHHHHHHHHHHHT--TCS
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCCcchhHHHHHHHHHHhcCCcEEecCC------CCCHHHHHHHHHHHHHhC--CCC
Confidence 345555566667777766543 33334 332222221 12665543321 1344443 4555544333 357
Q ss_pred EEEEeCCC-CCCcCCCCHHHHHHHHHHHhhcCcEEEEcccc
Q 011570 202 GVLITNPS-NPLGTFLDRETLKDIVSFINEKNIHLVCDEIY 241 (483)
Q Consensus 202 ~i~l~~P~-NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay 241 (483)
.|++..|. .+... --.+++.++.+....+.+++|+|...
T Consensus 185 vVIIDTaGrl~~d~-~lm~el~~i~~~~~pd~vlLVvDA~~ 224 (443)
T 3dm5_A 185 IIIVDTAGRHKEDK-ALIEEMKQISNVIHPHEVILVIDGTI 224 (443)
T ss_dssp EEEEECCCCSSCCH-HHHHHHHHHHHHHCCSEEEEEEEGGG
T ss_pred EEEEECCCcccchH-HHHHHHHHHHHhhcCceEEEEEeCCC
Confidence 78888773 22111 12234556666665567888888765
No 485
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=23.47 E-value=4.2e+02 Score=24.12 Aligned_cols=56 Identities=20% Similarity=0.314 Sum_probs=35.7
Q ss_pred CCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEe
Q 011570 142 PGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLIT 206 (483)
Q Consensus 142 ~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~ 206 (483)
++..+++..|.|..+ ++.+ |.+.+.+... +-.+.+..|.+.++..+++ +++.||+.
T Consensus 189 ~~~~~v~~H~af~Yf---~~~y-Gl~~~~~~~~---~~eps~~~l~~l~~~ik~~--~v~~If~e 244 (291)
T 1pq4_A 189 PQRKFIVFHPSWAYF---ARDY-NLVQIPIEVE---GQEPSAQELKQLIDTAKEN--NLTMVFGE 244 (291)
T ss_dssp SCCEEEESSCCCHHH---HHHT-TCEEEESCBT---TBCCCHHHHHHHHHHHHTT--TCCEEEEE
T ss_pred CCCEEEEECCchHHH---HHHC-CCEEeecccC---CCCCCHHHHHHHHHHHHHc--CCCEEEEe
Confidence 567888988888744 3444 9998776532 2346677777766554433 66766554
No 486
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=23.42 E-value=1.3e+02 Score=20.70 Aligned_cols=48 Identities=8% Similarity=0.054 Sum_probs=33.3
Q ss_pred ccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCc
Q 011570 180 KVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNI 233 (483)
Q Consensus 180 ~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~ 233 (483)
.++.+.|...+......++...+++-...+-|.|. +-++.+.|++.|+
T Consensus 26 ~v~~~~L~~~l~~~~~~~~~~~V~I~aD~~~~y~~------vv~vmd~l~~aG~ 73 (74)
T 2jwk_A 26 GLTEEMVTQLSRQEFDKDNNTLFLVGGAKEVPYEE------VIKALNLLHLAGI 73 (74)
T ss_dssp EECHHHHHHHHHHHHHHCTTCCEEEEECTTSCHHH------HHHHHHHHHHTTC
T ss_pred ccCHHHHHHHHHHHHhhCCCceEEEEcCCCCCHHH------HHHHHHHHHHcCC
Confidence 36788898888876665556666666666666554 6777888877764
No 487
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=23.42 E-value=47 Score=36.83 Aligned_cols=26 Identities=15% Similarity=0.404 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 218 RETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 218 ~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
.++++++++.|+++|+-||.|-+|..
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NH 586 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNH 586 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTC
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeccc
Confidence 68999999999999999999999964
No 488
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=23.40 E-value=2.1e+02 Score=24.24 Aligned_cols=69 Identities=10% Similarity=0.097 Sum_probs=36.7
Q ss_pred cEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccC-HHHHHHHHHHHHhcCCc
Q 011570 121 RIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVT-MEALEAAYEKAQESNIR 199 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d-~~~l~~~i~~~~~~~~~ 199 (483)
.|+||.|+...=..+...|.+.|..|.+..-.-... ....+++++..++. | .+.+.+++. +
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~----~~~~~~~~~~~D~~-------d~~~~~~~~~~-------~ 63 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV----PQYNNVKAVHFDVD-------WTPEEMAKQLH-------G 63 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGS----CCCTTEEEEECCTT-------SCHHHHHTTTT-------T
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccch----hhcCCceEEEeccc-------CCHHHHHHHHc-------C
Confidence 366766544333455567778887777654332111 11125555544332 4 677776654 4
Q ss_pred eeEEEEeC
Q 011570 200 IKGVLITN 207 (483)
Q Consensus 200 ~~~i~l~~ 207 (483)
+.+||.+-
T Consensus 64 ~d~vi~~a 71 (219)
T 3dqp_A 64 MDAIINVS 71 (219)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 66666543
No 489
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=23.39 E-value=1.2e+02 Score=26.41 Aligned_cols=38 Identities=18% Similarity=0.361 Sum_probs=25.4
Q ss_pred CCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEE
Q 011570 197 NIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEKNIHLVC 237 (483)
Q Consensus 197 ~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~ 237 (483)
|-.+.+|+..--.|+.|.... +.++.++|++||+.+|.
T Consensus 157 Gl~Pa~vicEi~~~~dG~mar---~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 157 GLQPAGVICELVRDEDGLMMR---LDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp TSCSBEEEEEBBCTTTCCBCB---HHHHHHHHHHHTCCEEE
T ss_pred CCCceEEEEEEeECCCCCcCC---HHHHHHHHHHcCCcEEE
Confidence 434544443333589999999 55566677799987775
No 490
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=23.37 E-value=3.8e+02 Score=23.50 Aligned_cols=84 Identities=15% Similarity=0.119 Sum_probs=41.4
Q ss_pred CCCcEEEeCChh-HHH-HHHHHHhcCCCCeEEEeCCCCcC---hHHHHhhhcCc-EEEEeecCCCCCcccCHHHHHHHHH
Q 011570 118 DPDRIVMSGGAT-GAH-ETVAFCLADPGDAFLVPTPYYPG---FDRDLRWRTGV-QLVPVVCDSSNDFKVTMEALEAAYE 191 (483)
Q Consensus 118 ~~~~i~it~G~~-~al-~~~~~~l~~~gd~Vlv~~P~y~~---~~~~~~~~~G~-~~~~v~~~~~~~~~~d~~~l~~~i~ 191 (483)
+...++||.|+. .+| ..+...|.+.|..|++..-.-.. ........ +. ++..+..|- -|.+.+++.++
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~v~~~~~ 79 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTL-DRNDSIILPCDV-----TNDAEIETCFA 79 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTS-SSCCCEEEECCC-----SSSHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhc-CCCCceEEeCCC-----CCHHHHHHHHH
Confidence 445677777653 223 33446677788887766433211 11122222 22 455555442 24566666665
Q ss_pred HHHhcCCceeEEEEeCC
Q 011570 192 KAQESNIRIKGVLITNP 208 (483)
Q Consensus 192 ~~~~~~~~~~~i~l~~P 208 (483)
+..+...++..+ ++|.
T Consensus 80 ~~~~~~g~id~l-i~~A 95 (266)
T 3oig_A 80 SIKEQVGVIHGI-AHCI 95 (266)
T ss_dssp HHHHHHSCCCEE-EECC
T ss_pred HHHHHhCCeeEE-EEcc
Confidence 544433356644 4444
No 491
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=23.36 E-value=1.9e+02 Score=27.01 Aligned_cols=51 Identities=20% Similarity=0.122 Sum_probs=37.0
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc
Q 011570 178 DFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFINEK 231 (483)
Q Consensus 178 ~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~ 231 (483)
+..+|.+.+++.++...+. .+..|+++ -++=-+..++.+|+.++++.+.+.
T Consensus 37 dg~iD~~~l~~li~~li~~--Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~ 87 (315)
T 3si9_A 37 NGAIDEKAFCNFVEWQITQ--GINGVSPV-GTTGESPTLTHEEHKRIIELCVEQ 87 (315)
T ss_dssp TSCBCHHHHHHHHHHHHHT--TCSEEECS-STTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEeC-ccccCccccCHHHHHHHHHHHHHH
Confidence 4579999999988766554 46666644 344446678999999999988663
No 492
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=23.32 E-value=91 Score=28.84 Aligned_cols=76 Identities=7% Similarity=0.132 Sum_probs=42.7
Q ss_pred CCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHHHHHh
Q 011570 150 TPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIVSFIN 229 (483)
Q Consensus 150 ~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~ 229 (483)
.|+|..+.+..... ..+++-+-.+ ++...+.+.++.+. .++.+++.+ +| ++.++.+++.+.|+
T Consensus 56 ~~vy~sl~el~~~~-~~Dv~ii~vp--------~~~~~~~v~ea~~~--Gi~~vVi~t----~G--~~~~~~~~l~~~A~ 118 (294)
T 2yv1_A 56 VPVFDTVKEAVKET-DANASVIFVP--------APFAKDAVFEAIDA--GIELIVVIT----EH--IPVHDTMEFVNYAE 118 (294)
T ss_dssp EEEESSHHHHHHHH-CCCEEEECCC--------HHHHHHHHHHHHHT--TCSEEEECC----SC--CCHHHHHHHHHHHH
T ss_pred EeeeCCHHHHhhcC-CCCEEEEccC--------HHHHHHHHHHHHHC--CCCEEEEEC----CC--CCHHHHHHHHHHHH
Confidence 34566665555432 4444433322 23333333333332 567555432 23 25677899999999
Q ss_pred hcCcEEEEccccc
Q 011570 230 EKNIHLVCDEIYA 242 (483)
Q Consensus 230 ~~~~~iI~Deay~ 242 (483)
++++.++-..+.+
T Consensus 119 ~~gi~viGPNc~G 131 (294)
T 2yv1_A 119 DVGVKIIGPNTPG 131 (294)
T ss_dssp HHTCEEECSSCCE
T ss_pred HcCCEEEcCCCce
Confidence 9999888777664
No 493
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=23.05 E-value=4.3e+02 Score=24.09 Aligned_cols=97 Identities=18% Similarity=0.166 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHhhhCCCCCcCCCcEEEeCCh---hHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeec
Q 011570 97 PEFRNAVAKFMGKVRGNRITFDPDRIVMSGGA---TGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVC 173 (483)
Q Consensus 97 ~~Lr~~ia~~~~~~~g~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~ 173 (483)
.+-|.++.+..-+..+ ..-.|+++.|+ .+++..+-.+---.-|.|++..|.|....
T Consensus 59 ~~Er~~v~~~~~~~~~-----grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~---------------- 117 (297)
T 3flu_A 59 VEEHTAVIEAVVKHVA-----KRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPS---------------- 117 (297)
T ss_dssp HHHHHHHHHHHHHHHT-----TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC----------------
T ss_pred HHHHHHHHHHHHHHhC-----CCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCC----------------
Confidence 4445555555443321 12357777664 35555554433233488999999885321
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCcCCCCHHHHHHHH
Q 011570 174 DSSNDFKVTMEALEAAYEKAQESNIRIKGVLITNPSNPLGTFLDRETLKDIV 225 (483)
Q Consensus 174 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~i~ 225 (483)
.+.+.+..+...+. .+..++++++|.. ||..++.+.+.+|+
T Consensus 118 ---------~~~l~~~f~~va~a-~~lPiilYn~P~~-tg~~l~~~~~~~La 158 (297)
T 3flu_A 118 ---------QEGIYQHFKTIAEA-TSIPMIIYNVPGR-TVVSMTNDTILRLA 158 (297)
T ss_dssp ---------HHHHHHHHHHHHHH-CCSCEEEEECHHH-HSSCCCHHHHHHHT
T ss_pred ---------HHHHHHHHHHHHHh-CCCCEEEEECCch-hccCCCHHHHHHHH
Confidence 11122222111111 1456788888864 89999977776665
No 494
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=23.03 E-value=2.8e+02 Score=25.37 Aligned_cols=56 Identities=14% Similarity=0.369 Sum_probs=38.9
Q ss_pred cCHHHHHHHHHHHHhcCC--ceeEEEEeCCCCCCcCCCCHHHHHHHHHHHhhc---C------cEEEEcccccc
Q 011570 181 VTMEALEAAYEKAQESNI--RIKGVLITNPSNPLGTFLDRETLKDIVSFINEK---N------IHLVCDEIYAA 243 (483)
Q Consensus 181 ~d~~~l~~~i~~~~~~~~--~~~~i~l~~P~NPtG~~~~~~~l~~i~~~a~~~---~------~~iI~Deay~~ 243 (483)
++.+.++..++.....+- +.++|. ||.+.+.+.++.++++.+++ + +.+++|=++.+
T Consensus 56 ~~~~ql~~~~~~~~~~~~~~~~daV~-------tG~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d 122 (300)
T 3zs7_A 56 MSLQEYDELMEGVRANNFLSNYRYIL-------TGYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGD 122 (300)
T ss_dssp CCHHHHHHHHHHHHHTTCGGGCSEEE-------ECCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC--
T ss_pred CCHHHHHHHHHHHHhcCCcccCCEEE-------ECCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEcccccc
Confidence 456778777777654432 456655 69999999998888877653 3 78999988764
No 495
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=22.92 E-value=1.8e+02 Score=27.32 Aligned_cols=37 Identities=16% Similarity=0.067 Sum_probs=31.8
Q ss_pred CCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccC
Q 011570 208 PSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAAT 244 (483)
Q Consensus 208 P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~ 244 (483)
-+||.|...+.+++.++++.|+++|+.|++|=-|++.
T Consensus 49 w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~ 85 (332)
T 1hjs_A 49 WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDT 85 (332)
T ss_dssp CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSS
T ss_pred eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCC
Confidence 4788888899999999999999999999999655443
No 496
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=22.84 E-value=3.1e+02 Score=24.09 Aligned_cols=73 Identities=21% Similarity=0.287 Sum_probs=38.4
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
..++||.|+...=..+...|.+.|..|++..-.-.. .. ....+..++ -|.+.++++++...++-.+
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~------~~-~~~~~~~Dl-------~d~~~v~~~~~~~~~~~g~ 87 (253)
T 2nm0_A 22 RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEP------PE-GFLAVKCDI-------TDTEQVEQAYKEIEETHGP 87 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCC------CT-TSEEEECCT-------TSHHHHHHHHHHHHHHTCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHh------hc-cceEEEecC-------CCHHHHHHHHHHHHHHcCC
Confidence 346666555433344556677888887765432111 11 233333332 2567777777665444445
Q ss_pred eeEEEEe
Q 011570 200 IKGVLIT 206 (483)
Q Consensus 200 ~~~i~l~ 206 (483)
+..+|.+
T Consensus 88 iD~lv~n 94 (253)
T 2nm0_A 88 VEVLIAN 94 (253)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 6755543
No 497
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=22.63 E-value=3.7e+02 Score=24.56 Aligned_cols=101 Identities=13% Similarity=0.067 Sum_probs=47.7
Q ss_pred CcEEEeCChhHHHHHHHHHhcCCCCeEEEeCCCCcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 011570 120 DRIVMSGGATGAHETVAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIR 199 (483)
Q Consensus 120 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 199 (483)
-.|+||.|+...=..++..|.+.|..|++..-.-......+....+++++...+ -|.+.++++++.. +
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl-------~d~~~~~~~~~~~-----~ 89 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSI-------ADHALVNQLIGDL-----Q 89 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCT-------TCHHHHHHHHHHH-----C
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeC-------CCHHHHHHHHhcc-----C
Confidence 357777654433344455666778777765432111111111101444443332 2567777777641 4
Q ss_pred eeEEEEeCCCCCCcCCCCH-------HHHHHHHHHHhhcCc
Q 011570 200 IKGVLITNPSNPLGTFLDR-------ETLKDIVSFINEKNI 233 (483)
Q Consensus 200 ~~~i~l~~P~NPtG~~~~~-------~~l~~i~~~a~~~~~ 233 (483)
+.+||-+-.....+ .... .-...+++.|.+.+.
T Consensus 90 ~D~vih~A~~~~~~-~~~~~~~~~N~~~~~~l~~a~~~~~~ 129 (333)
T 2q1w_A 90 PDAVVHTAASYKDP-DDWYNDTLTNCVGGSNVVQAAKKNNV 129 (333)
T ss_dssp CSEEEECCCCCSCT-TCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred CcEEEECceecCCC-ccCChHHHHHHHHHHHHHHHHHHhCC
Confidence 66666553322222 1111 113467777776653
No 498
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=22.39 E-value=3.3e+02 Score=24.13 Aligned_cols=104 Identities=9% Similarity=0.024 Sum_probs=58.6
Q ss_pred hHHHHHHHHHhcCCCCeEEEeCCC----CcChHHHHhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 011570 129 TGAHETVAFCLADPGDAFLVPTPY----YPGFDRDLRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQESNIRIKGVL 204 (483)
Q Consensus 129 ~~al~~~~~~l~~~gd~Vlv~~P~----y~~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~i~ 204 (483)
++++..+.++. ..|.+|++..|. |+ ....... |.++..+++... +++.+.+ .+...|+
T Consensus 34 T~lL~~~~r~~-~~g~kvli~kp~~D~Ryg--~~i~sr~-G~~~~a~~i~~~-------~di~~~~-------~~~dvVi 95 (234)
T 2orv_A 34 TELMRRVRRFQ-IAQYKCLVIKYAKDTRYS--SSFCTHD-RNTMEALPACLL-------RDVAQEA-------LGVAVIG 95 (234)
T ss_dssp HHHHHHHHHHH-TTTCCEEEEEETTCCCC--------------CEEEEESSG-------GGGHHHH-------TTCSEEE
T ss_pred HHHHHHHHHHH-HCCCeEEEEeecCCccch--HHHHhhc-CCeeEEEecCCH-------HHHHHHh-------ccCCEEE
Confidence 46666666554 567778877665 33 3344444 766655554321 2222222 1567888
Q ss_pred EeCCCCCCcCCCCHHHHHHHHHHHhhcCcEEEEccccccCccCCCCCcchHHHhhh
Q 011570 205 ITNPSNPLGTFLDRETLKDIVSFINEKNIHLVCDEIYAATVFTKESSFVSIAEIID 260 (483)
Q Consensus 205 l~~P~NPtG~~~~~~~l~~i~~~a~~~~~~iI~Deay~~~~~~~~~~~~s~~~l~~ 260 (483)
+.-.+.-++ +.++++...+.|+.||+=.-..+ |.+ ..|.+...+.+
T Consensus 96 IDEaQF~~~-------v~el~~~l~~~gi~VI~~GL~~D--F~~-~~F~~~~~Ll~ 141 (234)
T 2orv_A 96 IDEGQFFPD-------IVEFCEAMANAGKTVIVAALDGT--FQR-KPFGAILNLVP 141 (234)
T ss_dssp ESSGGGCTT-------HHHHHHHHHHTTCEEEEECCSBC--TTS-SBCTTGGGGGG
T ss_pred EEchhhhhh-------HHHHHHHHHhCCCEEEEEecccc--ccc-CCcccHHHHHH
Confidence 887666442 66667777678999999777766 566 66766666654
No 499
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=22.31 E-value=3.9e+02 Score=23.25 Aligned_cols=80 Identities=10% Similarity=0.043 Sum_probs=39.6
Q ss_pred cEEEeCChhHHHHHHHHHhcC-CCCeEEEeCCCCcChHHH---HhhhcCcEEEEeecCCCCCcccCHHHHHHHHHHHHhc
Q 011570 121 RIVMSGGATGAHETVAFCLAD-PGDAFLVPTPYYPGFDRD---LRWRTGVQLVPVVCDSSNDFKVTMEALEAAYEKAQES 196 (483)
Q Consensus 121 ~i~it~G~~~al~~~~~~l~~-~gd~Vlv~~P~y~~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 196 (483)
.++||.|+...=..+...|.+ .|..|++..-.-...... +... |.++..+..|- -|.+.+++.+++..+.
T Consensus 6 ~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 6 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-GLSPRFHQLDI-----DDLQSIRALRDFLRKE 79 (276)
T ss_dssp EEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT-TCCCEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc-CCeeEEEECCC-----CCHHHHHHHHHHHHHh
Confidence 456655444332344456677 787777664432222222 2222 44444455442 2567777766654433
Q ss_pred CCceeEEEEe
Q 011570 197 NIRIKGVLIT 206 (483)
Q Consensus 197 ~~~~~~i~l~ 206 (483)
..++..||-+
T Consensus 80 ~g~id~li~~ 89 (276)
T 1wma_A 80 YGGLDVLVNN 89 (276)
T ss_dssp HSSEEEEEEC
T ss_pred cCCCCEEEEC
Confidence 3356655433
No 500
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=22.24 E-value=1.5e+02 Score=30.53 Aligned_cols=27 Identities=11% Similarity=0.244 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHhhcCcEEEEcccccc
Q 011570 217 DRETLKDIVSFINEKNIHLVCDEIYAA 243 (483)
Q Consensus 217 ~~~~l~~i~~~a~~~~~~iI~Deay~~ 243 (483)
+.++++++++.|+++|+-||.|-++..
T Consensus 197 t~~df~~Lv~~aH~~Gi~VilD~V~NH 223 (601)
T 3edf_A 197 SNEDFVRLSTEARKRGMGLIQDVVLSH 223 (601)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHHHHcCCEEEEEECCcc
Confidence 689999999999999999999999854
Done!