BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>011572
MQSGSKSKCASASHQFLLDSAKNRLNDLQEKFANLRVARKEGRANDVAVLEEQVNQILRE
WNSELSAPSPASSLLGGSLGLFPNDIDRLLQLGDEQDDATSPLAGFAEMKPQPDVQGHPG
TMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQLDYSHLIFRQELEN
LLLDGVNGTEECEKDIGPNSLPIIHPPPSAFMGPKCALWDCTRPALGSELFEDYCSNFHA
TLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHCEGAATTKSPWNATEL
FDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHESRKLVMKEFGGQKRSY
YMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKVKVTKDSLADLQKKMGRL
TADVPVDNKSSFKGKIETNGKVDSANVNSSQNEMTSATEILHHGSSSPYKYLADNSADYY
HKY

High Scoring Gene Products

Symbol, full name Information P value
VOZ1
AT1G28520
protein from Arabidopsis thaliana 3.2e-120
VOZ2
AT2G42400
protein from Arabidopsis thaliana 3.1e-108

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  011572
        (483 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2018738 - symbol:VOZ1 "AT1G28520" species:3702...  1183  3.2e-120  1
TAIR|locus:2053786 - symbol:VOZ2 "AT2G42400" species:3702...   912  3.1e-108  2


>TAIR|locus:2018738 [details] [associations]
            symbol:VOZ1 "AT1G28520" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0009610 "response to symbiotic fungus" evidence=RCA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0048574 "long-day
            photoperiodism, flowering" evidence=IMP] [GO:0048578 "positive
            regulation of long-day photoperiodism, flowering" evidence=IMP]
            PROSITE:PS50103 EMBL:CP002684 GO:GO:0005634 GO:GO:0005737
            GO:GO:0045893 GO:GO:0046872 GO:GO:0043565 GO:GO:0006351
            GO:GO:0009585 GO:GO:0048578 GO:GO:0048574 EMBL:AC010155
            EMBL:AC007508 EMBL:AB125256 EMBL:BT020261 EMBL:AK227014
            EMBL:AK317006 IPI:IPI00545506 PIR:B86411 RefSeq:NP_001077618.1
            RefSeq:NP_174174.1 UniGene:At.40873 IntAct:Q9SGQ0
            EnsemblPlants:AT1G28520.1 EnsemblPlants:AT1G28520.2 GeneID:839752
            KEGG:ath:AT1G28520 TAIR:At1g28520 HOGENOM:HOG000030392
            InParanoid:Q9SGQ0 OMA:HLPHSEN PhylomeDB:Q9SGQ0
            ProtClustDB:CLSN2679633 Genevestigator:Q9SGQ0 Uniprot:Q9SGQ0
        Length = 486

 Score = 1183 (421.5 bits), Expect = 3.2e-120, P = 3.2e-120
 Identities = 259/494 (52%), Positives = 308/494 (62%)

Query:     5 SKSKCASASHQFLLDSAKNRLNDLQEKFANLRVARKEGRANDVAVLEEQVNQILREWNSE 64
             SK+ C SASH+   D AKNR++DLQ    +L+ ARKE R  DV +LEEQVNQ+LREW SE
Sbjct:     6 SKTNCRSASHKLFKDKAKNRVDDLQGMLLDLQFARKESRPTDVTLLEEQVNQMLREWKSE 65

Query:    65 XXXXX-XXXXXXXXXXXXFPNDIDRLLQLGDEQDDATSPLAGFAEMKPQPDVQG-HPGTM 122
                               F +DI RLLQL DE+DDATS LA     KP+P  Q    G  
Sbjct:    66 LNEPSPASSLQQGGTLGSFSSDICRLLQLCDEEDDATSKLAA---PKPEPADQNLEAGKA 122

Query:   123 MAFQEDYVVNNELQGHCFQGF---DKCEDSASGLHNPTVGISGLTTQLDYSHLIFRQELE 179
               FQ  Y   N +QG    G    D C+D +    N   G + L     Y     +QE E
Sbjct:   123 AVFQRGY---NLVQGKSEHGLPLVDNCKDLSLAAGNNFDGTAPLEYHQQYD---LQQEFE 176

Query:   180 NLLLDGVNGTEECEKDIGP----NSLPIIHPPPSAFMGPKCALWDCTRPALGSELFEDYC 235
                  G N         GP    N +P I PPPSAF+GPKCALWDC RPA G + F+DYC
Sbjct:   177 PNFNGGFNNCPSYGVVEGPIHISNFIPTICPPPSAFLGPKCALWDCPRPAQGFDWFQDYC 236

Query:   236 SNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHCEGAATTKSPW 295
             S+FHA LA +E  PG+ PV+RPGGI LKD LLF A++A+A GK VGIP CEGAAT KSPW
Sbjct:   237 SSFHAALAFNEGPPGMNPVVRPGGIGLKDGLLFAALSAKAGGKDVGIPECEGAATAKSPW 296

Query:   296 NATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHESRKLVMKEFGG 355
             NA ELFDL +LE ET+REWLFFDK R+AFESG RKQRSLPD++GRGWHESRK +M EFGG
Sbjct:   297 NAPELFDLTVLESETLREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQIMVEFGG 356

Query:   356 QKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKVKVTKDSLADLQK 415
              KRSYYMDPQP    EWHLYEYEI   DA ALYRLE+KL   KK+ K KV+ DS+ADLQK
Sbjct:   357 LKRSYYMDPQPLHHFEWHLYEYEINKCDACALYRLELKLVDGKKTSKGKVSNDSVADLQK 416

Query:   416 KMGRLTADVPVDN---------KSSFKGKIETNGKVDSANVNSSQNEMTSATEILHHGSS 466
             +MGRLTA+ P +N         K   KG+ + + KV + NV   QN +  A +   +G  
Sbjct:   417 QMGRLTAEFPPENNTTNTTNNNKRCIKGRPKVSTKVATGNV---QNTVEQAND---YGVG 470

Query:   467 SPYKYLADNSADYY 480
               + YL  N +DYY
Sbjct:   471 EEFNYLVGNLSDYY 484


>TAIR|locus:2053786 [details] [associations]
            symbol:VOZ2 "AT2G42400" species:3702 "Arabidopsis
            thaliana" [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0048574 "long-day photoperiodism, flowering"
            evidence=IMP] [GO:0048578 "positive regulation of long-day
            photoperiodism, flowering" evidence=IMP] PROSITE:PS50103
            GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0043565 GO:GO:0006351
            GO:GO:0009585 GO:GO:0048578 GO:GO:0048574 EMBL:AC005956
            HOGENOM:HOG000030392 EMBL:AB125257 EMBL:AF361831 EMBL:AY078048
            IPI:IPI00519948 PIR:E84853 RefSeq:NP_565972.1 UniGene:At.28716
            IntAct:Q9SLB9 PaxDb:Q9SLB9 PRIDE:Q9SLB9 EnsemblPlants:AT2G42400.1
            GeneID:818841 KEGG:ath:AT2G42400 TAIR:At2g42400 eggNOG:NOG269595
            InParanoid:Q9SLB9 OMA:ITSQYDY PhylomeDB:Q9SLB9
            ProtClustDB:CLSN2917313 Genevestigator:Q9SLB9 Uniprot:Q9SLB9
        Length = 450

 Score = 912 (326.1 bits), Expect = 3.1e-108, Sum P(2) = 3.1e-108
 Identities = 181/307 (58%), Positives = 224/307 (72%)

Query:   127 EDYVVNNELQG---HC-FQGFDKCEDSASGLHNPTVGIS-GLTTQLDYSHLIFRQELENL 181
             ED + + E  G   H  ++GFD   +SA   H+  +  +  +T+Q DY     RQEL+N 
Sbjct:   136 EDALNSTETHGQQLHYGYEGFDPSINSAPDFHDQKLSSNLDITSQYDYIFSEVRQELDNS 195

Query:   182 LLDGVNGTEECEKDIGPNSLPI-IHPPPSAFMGPKCALWDCTRPALGSELFEDYCSNFHA 240
                 ++ +EE + +    S P  +  PPSAF+GPKCALWDCTRPA GSE + DYCSN+H 
Sbjct:   196 PSTKLDSSEEID-NFAEFSTPSSVRVPPSAFLGPKCALWDCTRPAQGSEWYLDYCSNYHG 254

Query:   241 TLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHCEGAATTKSPWNATEL 300
             TLA++EDSPG  PVLRPGGI+LKD+LL +A+ A+ QGK VGIP CEGA  TK PWNA EL
Sbjct:   255 TLALNEDSPGTAPVLRPGGISLKDNLLIDALRAKTQGKNVGIPVCEGAVNTKCPWNAAEL 314

Query:   301 FDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHESRKLVMKEFGGQKRSY 360
             F L L+EGETIREWLFFDK R+A++SG RKQRSLPD+SGRGWHESRK +MKE  GQKRSY
Sbjct:   315 FHLELVEGETIREWLFFDKPRRAYDSGNRKQRSLPDYSGRGWHESRKQLMKEQEGQKRSY 374

Query:   361 YMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKVKVTKDSLADLQKKMG-- 418
             YMDPQP    EWHL+EY+I   DA ALYRLE+K+ + KKSPK K++KD LADLQKKMG  
Sbjct:   375 YMDPQPPGPFEWHLFEYQINESDACALYRLELKVGNGKKSPKGKISKDPLADLQKKMGQF 434

Query:   419 RLTADVP 425
             ++ +D P
Sbjct:   435 KVASDKP 441

 Score = 178 (67.7 bits), Expect = 3.1e-108, Sum P(2) = 3.1e-108
 Identities = 40/104 (38%), Positives = 60/104 (57%)

Query:    11 SASHQFLLDSAKNRLNDLQEKFANLRVARKEGRANDVAVLEEQVNQILREWNSEXXXXXX 70
             +++HQ    + + +L +LQE+F +L+ ARKEGR  D+A+LE Q++Q +REW +E      
Sbjct:     8 TSAHQ----NVEEKLRELQERFCHLQAARKEGRHGDLALLEAQISQNIREWQAELTAPSP 63

Query:    71 XXXXXXXXXXXFPNDIDRLLQLGDEQDDATSPLAGFAEMKPQPD 114
                        F  +   LL+L DE+DDATS L   A  KP P+
Sbjct:    64 ESSLLGEGISQFLEEFAPLLKL-DEEDDATSTLKEHAGAKPDPE 106

 Score = 39 (18.8 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query:   391 EVKLASEKKSPKVKVTKD 408
             + K+AS+K SP  K  K+
Sbjct:   433 QFKVASDKPSPPTKGRKE 450


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.132   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      483       466   0.00097  118 3  11 23  0.45    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  302 KB (2156 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  41.33u 0.12s 41.45t   Elapsed:  00:00:02
  Total cpu time:  41.33u 0.12s 41.45t   Elapsed:  00:00:02
  Start:  Tue May 21 09:57:02 2013   End:  Tue May 21 09:57:04 2013

Back to top