Your job contains 1 sequence.
>011573
MESKDLFTSLGSIIASGMFLWAMFQQYFPYELRHNIEKYSQRLVSFFYPYVQITFNEFTG
DRFMRSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWW
SSGKHISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRKL
YTNNGSNWVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLY
GPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDL
TGQRRKKKEKKEDEGNDKDPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVF
TTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIESHNLFDKIGELLGEAKM
TPADVAEHLMPKTFPADVEFSLRSLNQALELAKEEARRVKVDDKEANENESLGKEEAKEE
EK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011573
(482 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2178067 - symbol:AATP1 "AAA-ATPase 1" species:... 1433 1.0e-146 1
TAIR|locus:2095512 - symbol:AT3G28580 species:3702 "Arabi... 1388 6.1e-142 1
TAIR|locus:2098658 - symbol:AT3G28510 species:3702 "Arabi... 1267 4.0e-129 1
TAIR|locus:2098648 - symbol:AT3G28540 species:3702 "Arabi... 1246 6.8e-127 1
TAIR|locus:2095537 - symbol:AT3G28610 species:3702 "Arabi... 1126 3.5e-114 1
TAIR|locus:2178057 - symbol:AT5G40000 species:3702 "Arabi... 1121 1.2e-113 1
TAIR|locus:2095532 - symbol:AT3G28600 species:3702 "Arabi... 1120 1.5e-113 1
TAIR|locus:2098638 - symbol:AT3G28520 species:3702 "Arabi... 1113 8.4e-113 1
TAIR|locus:2095502 - symbol:AT3G28570 species:3702 "Arabi... 1017 1.3e-102 1
TAIR|locus:2174502 - symbol:AT5G57480 species:3702 "Arabi... 942 1.1e-94 1
TAIR|locus:505006520 - symbol:AT4G25835 species:3702 "Ara... 923 1.1e-92 1
TAIR|locus:2078007 - symbol:AT3G50940 species:3702 "Arabi... 581 8.9e-92 2
TAIR|locus:2128916 - symbol:AT4G30250 species:3702 "Arabi... 880 4.1e-88 1
TAIR|locus:2077997 - symbol:BCS1 "cytochrome BC1 synthesi... 875 1.4e-87 1
TAIR|locus:1005716649 - symbol:AT2G18193 species:3702 "Ar... 556 2.5e-83 2
TAIR|locus:2175986 - symbol:AT5G17760 species:3702 "Arabi... 797 2.6e-79 1
TAIR|locus:2037186 - symbol:AT1G43910 species:3702 "Arabi... 785 4.8e-78 1
TAIR|locus:2053109 - symbol:AT2G18190 species:3702 "Arabi... 781 1.3e-77 1
TAIR|locus:2175956 - symbol:AT5G17740 species:3702 "Arabi... 775 5.5e-77 1
TAIR|locus:2175946 - symbol:AT5G17730 species:3702 "Arabi... 457 5.3e-73 2
TAIR|locus:2175976 - symbol:AT5G17750 species:3702 "Arabi... 685 1.9e-67 1
TAIR|locus:2039981 - symbol:AT2G46620 species:3702 "Arabi... 420 3.3e-61 2
TAIR|locus:2115954 - symbol:AT4G05380 species:3702 "Arabi... 590 2.2e-57 1
TAIR|locus:2086591 - symbol:AT3G29800 species:3702 "Arabi... 334 6.8e-47 2
TAIR|locus:2095467 - symbol:AT3G28560 "AT3G28560" species... 425 6.8e-40 1
DICTYBASE|DDB_G0291910 - symbol:bcs1lB "mitochondrial cha... 336 1.8e-30 1
UNIPROTKB|G4MXF6 - symbol:MGG_15496 "Uncharacterized prot... 326 1.6e-27 1
ZFIN|ZDB-GENE-040426-938 - symbol:bcs1l "BCS1-like (yeast... 207 3.9e-26 2
ASPGD|ASPL0000063397 - symbol:AN7549 species:162425 "Emer... 315 5.3e-26 1
WB|WBGene00010042 - symbol:bcs-1 species:6239 "Caenorhabd... 182 5.9e-25 3
DICTYBASE|DDB_G0289135 - symbol:bcs1lA "mitochondrial cha... 191 1.2e-22 2
FB|FBgn0032195 - symbol:CG4908 species:7227 "Drosophila m... 190 1.7e-22 2
UNIPROTKB|Q5E9H5 - symbol:BCS1L "Mitochondrial chaperone ... 184 5.8e-22 2
POMBASE|SPAC644.07 - symbol:SPAC644.07 "mitochondrial Rie... 183 6.4e-22 2
UNIPROTKB|F1P1Q6 - symbol:BCS1L "Uncharacterized protein"... 183 2.5e-21 2
UNIPROTKB|I3LFK0 - symbol:BCS1L "Uncharacterized protein"... 183 2.5e-21 2
DICTYBASE|DDB_G0286765 - symbol:DDB_G0286765 "BCS1-like p... 167 3.0e-21 2
MGI|MGI:1914071 - symbol:Bcs1l "BCS1-like (yeast)" specie... 172 3.4e-21 2
UNIPROTKB|E2RE50 - symbol:BCS1L "Uncharacterized protein"... 181 4.3e-21 2
ASPGD|ASPL0000007908 - symbol:AN6397 species:162425 "Emer... 270 7.2e-21 1
UNIPROTKB|E1BWG5 - symbol:BCS1L "Uncharacterized protein"... 179 7.5e-21 2
UNIPROTKB|Q9Y276 - symbol:BCS1L "Mitochondrial chaperone ... 177 1.3e-20 2
RGD|1359658 - symbol:Bcs1l "BC1 (ubiquinol-cytochrome c r... 172 1.8e-20 2
ASPGD|ASPL0000041452 - symbol:AN3131 species:162425 "Emer... 182 1.8e-20 2
SGD|S000002783 - symbol:BCS1 "Protein translocase and cha... 189 5.6e-20 2
CGD|CAL0005742 - symbol:orf19.458 species:5476 "Candida a... 172 5.3e-19 2
UNIPROTKB|G4MYI1 - symbol:MGG_10383 "Mitochondrial chaper... 159 8.5e-19 2
GENEDB_PFALCIPARUM|PFF0155w - symbol:PFF0155w "bcs1-like ... 233 2.0e-16 2
UNIPROTKB|C6KSN2 - symbol:PFF0155w "Bcs1 protein, putativ... 233 2.0e-16 2
TAIR|locus:2115914 - symbol:AT4G05340 species:3702 "Arabi... 207 4.4e-16 1
UNIPROTKB|G4MN83 - symbol:MGG_02058 "Mitochondrial chaper... 226 9.4e-16 1
UNIPROTKB|G4NGV5 - symbol:MGG_04018 "Mitochondrial chaper... 149 8.8e-15 2
UNIPROTKB|H7BZF6 - symbol:BCS1L "Mitochondrial chaperone ... 131 1.9e-12 2
UNIPROTKB|C9J1S9 - symbol:BCS1L "Mitochondrial chaperone ... 146 1.9e-09 1
UNIPROTKB|H7C492 - symbol:BCS1L "Mitochondrial chaperone ... 138 2.8e-09 2
UNIPROTKB|G4MMM3 - symbol:MGG_16395 "ATP-dependent Zn pro... 144 1.2e-08 2
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 157 6.9e-08 1
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 152 8.1e-08 1
UNIPROTKB|P37476 - symbol:ftsH "ATP-dependent zinc metall... 155 8.6e-08 1
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 151 8.9e-08 1
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 149 9.1e-08 2
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 149 9.1e-08 2
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 152 9.9e-08 1
WB|WBGene00004505 - symbol:rpt-5 species:6239 "Caenorhabd... 151 1.2e-07 1
UNIPROTKB|O76371 - symbol:rpt-5 "Protein RPT-5" species:6... 151 1.2e-07 1
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 151 1.3e-07 1
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 151 1.3e-07 1
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 151 1.3e-07 1
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 151 1.3e-07 1
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 151 1.3e-07 1
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 151 1.3e-07 1
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 151 1.3e-07 1
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 151 1.3e-07 1
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 150 1.3e-07 1
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 150 1.3e-07 1
TIGR_CMR|BA_0064 - symbol:BA_0064 "cell division protein ... 153 1.4e-07 1
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 150 1.7e-07 1
DICTYBASE|DDB_G0272120 - symbol:rcaA "peptidase M41, FtsH... 109 1.9e-07 2
CGD|CAL0005827 - symbol:RPT4 species:5476 "Candida albica... 149 2.0e-07 1
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 148 2.2e-07 1
ASPGD|ASPL0000010049 - symbol:AN4236 species:162425 "Emer... 149 2.4e-07 1
FB|FBgn0036224 - symbol:Rpt4R "Regulatory particle triple... 146 3.8e-07 1
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 146 4.0e-07 1
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 146 4.0e-07 1
TAIR|locus:2036099 - symbol:RPT5B "26S proteasome AAA-ATP... 146 4.3e-07 1
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei... 108 5.3e-07 2
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 147 6.1e-07 1
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 147 6.2e-07 1
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 147 6.2e-07 1
CGD|CAL0002261 - symbol:RPT5 species:5476 "Candida albica... 145 6.3e-07 1
UNIPROTKB|Q9FXT8 - symbol:OsRPT4 "Os02g0199900 protein" s... 144 6.4e-07 1
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 143 8.0e-07 1
FB|FBgn0034792 - symbol:CG3499 species:7227 "Drosophila m... 99 8.1e-07 2
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 146 8.4e-07 1
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 146 8.4e-07 1
ZFIN|ZDB-GENE-030131-8730 - symbol:psmc1a "proteasome (pr... 143 9.9e-07 1
ZFIN|ZDB-GENE-040625-69 - symbol:psmc1b "proteasome (pros... 143 9.9e-07 1
WB|WBGene00004502 - symbol:rpt-2 species:6239 "Caenorhabd... 143 1.0e-06 1
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 145 1.0e-06 1
CGD|CAL0001552 - symbol:PR26 species:5476 "Candida albica... 107 1.0e-06 2
WARNING: Descriptions of 211 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2178067 [details] [associations]
symbol:AATP1 "AAA-ATPase 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0010154
"fruit development" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005739 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0010431 EMBL:AB010077 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00538441
RefSeq:NP_198817.1 UniGene:At.65609 ProteinModelPortal:Q9FLD5
SMR:Q9FLD5 PRIDE:Q9FLD5 EnsemblPlants:AT5G40010.1 GeneID:833998
KEGG:ath:AT5G40010 TAIR:At5g40010 InParanoid:Q9FLD5 OMA:HEEITDE
PhylomeDB:Q9FLD5 ProtClustDB:CLSN2685235 Genevestigator:Q9FLD5
Uniprot:Q9FLD5
Length = 514
Score = 1433 (509.5 bits), Expect = 1.0e-146, P = 1.0e-146
Identities = 279/475 (58%), Positives = 362/475 (76%)
Query: 5 DLFTSLGSIIASGMFLWAMFQQYFPYELRHNIEKYSQRLVSFFYPYVQITFNEFTGDRFM 64
+++T+ GS +AS +F++ +F+++FPY LR + E +Q L+ F YPY+QITF+E++G+RF
Sbjct: 6 EVWTNTGSALASLVFIYTIFERFFPYRLREHFEPLAQSLIGFIYPYIQITFHEYSGERFK 65
Query: 65 RSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWWSSGK 124
RS+ Y AI++YLS SS++AK+L A+ IK + +S++LSMDDHEE+ DEFQG+K+WW S K
Sbjct: 66 RSDVYDAIQSYLSKDSSSRAKKLTANTIKGN-KSIILSMDDHEEITDEFQGVKVWWQSKK 124
Query: 125 HISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRKLYTNN 184
H S+S+ SFYP DE R+Y L FH+R R++I YL V+ EG+ I+V+NR RKLY+NN
Sbjct: 125 HQSESRAISFYPKADESRFYMLKFHRRDREVITKKYLNHVISEGKTIEVKNRERKLYSNN 184
Query: 185 GSN---------WVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKR 235
S W HV FEHPATF TLAME +K+EI +DLI FS S+D+Y +IG+AWKR
Sbjct: 185 PSQNWSGYKQTKWSHVTFEHPATFDTLAMEYKKKEEIKNDLIKFSNSKDYYKKIGKAWKR 244
Query: 236 GYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVIEDID 295
GYLL+GPPGTGKSTMIAAMANLL YD+YDLELT VKDNTELR+LLIETS KSIIVIEDID
Sbjct: 245 GYLLFGPPGTGKSTMIAAMANLLEYDVYDLELTTVKDNTELRRLLIETSGKSIIVIEDID 304
Query: 296 CSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGE 355
CSLDLTGQR+ +++ K++ E S+VTLSGLLNFIDGLWSACGGE
Sbjct: 305 CSLDLTGQRKQKKDEEEDEDETSPIEKQMKKDQGENKGSKVTLSGLLNFIDGLWSACGGE 364
Query: 356 RLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNI---ESHNLFDKIG 412
R+IVFTTN+I+KLDPALIRKGRMDKHIE+S+C +EAFKVLA NYL+ + + LFD+I
Sbjct: 365 RIIVFTTNFIDKLDPALIRKGRMDKHIEMSYCGFEAFKVLANNYLDAKEEDDNELFDEIK 424
Query: 413 ELLG--EAKMTPADVAEHLMPKTFPADVEFSLRSLNQALELAKEEARRVKVDDKE 465
LL E KMTPADV E+L+ K+ E L+ L +AL+ KEEA+R +++D+E
Sbjct: 425 RLLEVEEIKMTPADVGENLLKKSEVETKEICLKRLIEALKEEKEEAKR-RIEDEE 478
>TAIR|locus:2095512 [details] [associations]
symbol:AT3G28580 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005524 GO:GO:0009737
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP000420 HSSP:Q9LCZ4 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 ProtClustDB:CLSN2685235
EMBL:AY072076 IPI:IPI00523143 RefSeq:NP_189499.1 UniGene:At.42770
ProteinModelPortal:Q9LJJ7 SMR:Q9LJJ7 STRING:Q9LJJ7
EnsemblPlants:AT3G28580.1 GeneID:822488 KEGG:ath:AT3G28580
TAIR:At3g28580 InParanoid:Q9LJJ7 OMA:PRSKTKD PhylomeDB:Q9LJJ7
ArrayExpress:Q9LJJ7 Genevestigator:Q9LJJ7 Uniprot:Q9LJJ7
Length = 500
Score = 1388 (493.7 bits), Expect = 6.1e-142, P = 6.1e-142
Identities = 276/470 (58%), Positives = 354/470 (75%)
Query: 6 LFTSLGSIIASGMFLWAMFQQYFPYELRHNIEKYSQRLVSFFYPYVQITFNEFTGDRFMR 65
L+T+ GS +A+ MF++ +F+Q+FP +E + RL FYPY+QITF+E++G+ F R
Sbjct: 7 LWTNTGSALATLMFVYTIFKQFFPL-FGPQLEPFLYRLFGRFYPYIQITFHEYSGEHFKR 65
Query: 66 SEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWWSSGKH 125
SEAY I++YLS SS +AK+LKA+ K S +S+VLSMDD EE+ D+F+GI++WW S K
Sbjct: 66 SEAYLGIQSYLSKDSSARAKKLKANTTKGS-KSIVLSMDDKEEITDDFEGIRVWWQSKKE 124
Query: 126 ISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRKLYTN-- 183
+ Q FSFYP +EKRYY L FH+R R++I+ YL V++EG+ I+ +NR RKLY+N
Sbjct: 125 GATRQSFSFYPEANEKRYYMLRFHRRDREVIIERYLEHVMREGKTIEQKNRERKLYSNTP 184
Query: 184 -----NGSNWVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYL 238
N S W HV FEHPATF TLAME +K+EI DLI FSKS+D+Y +IG+AWKRGYL
Sbjct: 185 GQSHGNNSKWSHVTFEHPATFDTLAMEENKKEEIKSDLIKFSKSKDYYKKIGKAWKRGYL 244
Query: 239 LYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVIEDIDCSL 298
L+GPPGTGKSTMIAAMAN L YD+YDLELT VKDNT LR+LLIETS+KSIIVIEDIDCSL
Sbjct: 245 LFGPPGTGKSTMIAAMANFLEYDVYDLELTTVKDNTHLRRLLIETSAKSIIVIEDIDCSL 304
Query: 299 DLTGQRRXXXXXXXXXXXXXXPRQKLG-KEERETNNSQVTLSGLLNFIDGLWSACGGERL 357
+LTGQR+ +K+ K E E S+VTLSGLLNFIDGLWSACGGER+
Sbjct: 305 NLTGQRKKKEEEEEDGDDKNTIEKKMMMKNEGENKESKVTLSGLLNFIDGLWSACGGERI 364
Query: 358 IVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIESHNLFDKIGELLG- 416
IVFTTN+++KLDPALIRKGRMDKHIE+S+C +EAFKVLAKNYL++E +F++I LL
Sbjct: 365 IVFTTNFVDKLDPALIRKGRMDKHIEMSYCCFEAFKVLAKNYLDVEESEMFEEIKRLLEV 424
Query: 417 -EAKMTPADVAEHLMPKTFPADVEFSLRSLNQALELAKEEARRVKVDDKE 465
E KMTPADV E+L+PK+ E L+ L +AL+ KEEA++ KV+++E
Sbjct: 425 EEIKMTPADVGENLLPKSEKEGGETCLKRLIEALKEEKEEAKK-KVEEEE 473
>TAIR|locus:2098658 [details] [associations]
symbol:AT3G28510 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005783 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2685225 EMBL:AY099692
IPI:IPI00532130 RefSeq:NP_189492.1 UniGene:At.42784
ProteinModelPortal:Q9LH84 SMR:Q9LH84 PaxDb:Q9LH84
EnsemblPlants:AT3G28510.1 GeneID:822481 KEGG:ath:AT3G28510
TAIR:At3g28510 InParanoid:Q9LH84 OMA:YLEIETH PhylomeDB:Q9LH84
ArrayExpress:Q9LH84 Genevestigator:Q9LH84 Uniprot:Q9LH84
Length = 530
Score = 1267 (451.1 bits), Expect = 4.0e-129, P = 4.0e-129
Identities = 248/474 (52%), Positives = 340/474 (71%)
Query: 1 MESKDLFTSLGSIIASGMFLWAMFQQYFPYELRHNIEKYSQRLVSFFYPYVQITFNEFTG 60
+E+ ++ G+ + S MF WA+++QY P R +E+Y +++ + YV I F E+T
Sbjct: 2 LETGAIWGITGTTVTSFMFFWAIYKQYVPAHFRAYVERYFHKMIGWISYYVDIKFTEYTD 61
Query: 61 DRFMRSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWW 120
+ RS+AY +I NYL+SKS+ AKRLKA+ KNS +SLV SMDDHEE+ DEF+G+K+ W
Sbjct: 62 EGLKRSQAYDSIRNYLASKSTALAKRLKANETKNS-KSLVFSMDDHEEIEDEFEGVKVKW 120
Query: 121 SSGKHISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRKL 180
S + + Q +++E+R++ L+FH+RHR +I+ YL VL+EG+ I + NR RKL
Sbjct: 121 YSNVKVIQPQSNYGQRSSEERRHFTLSFHRRHRGMIIETYLDHVLREGKAIGLMNRERKL 180
Query: 181 YTNNGSN---------WVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGR 231
YTNN S W +V F HPATF+TLAM+P +K+ I DLI FSK +D+Y ++G+
Sbjct: 181 YTNNSSQEWYPWRSGKWSNVPFHHPATFETLAMDPEKKEGIKKDLIKFSKGKDYYKKVGK 240
Query: 232 AWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVI 291
WKRGYLL+GPPGTGKSTMIAA+AN L YD+YDLELT VKDN+EL+KLL++T+SKSIIVI
Sbjct: 241 PWKRGYLLFGPPGTGKSTMIAAIANFLDYDVYDLELTTVKDNSELKKLLLDTTSKSIIVI 300
Query: 292 EDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSA 351
EDIDCSLDLTGQR+ ++ K + + S+VTLSGLLN IDGLWSA
Sbjct: 301 EDIDCSLDLTGQRKKKKEEDEEEDGEEK-KEGEKKPKVDDKQSKVTLSGLLNSIDGLWSA 359
Query: 352 CGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIESHNLFDKI 411
C GE++IVFTTN+++KLDPALIR+GRMD HIE+S+C +EAFKVLAKNYL IE+H+L+ +I
Sbjct: 360 CSGEKIIVFTTNFVDKLDPALIRRGRMDNHIEMSYCKFEAFKVLAKNYLEIETHDLYGEI 419
Query: 412 GELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLNQALELAKEEARRVKVDDKE 465
L E M+PADVAE LMPK+ D + ++ L + LE KE+AR++ ++++
Sbjct: 420 ERKLEETDMSPADVAETLMPKSDEEDADICIKRLVKTLEEEKEKARKLAEEEEK 473
>TAIR|locus:2098648 [details] [associations]
symbol:AT3G28540 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0017111
EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00530975 RefSeq:NP_189495.1 UniGene:At.42777
ProteinModelPortal:Q9LH82 SMR:Q9LH82 PRIDE:Q9LH82
EnsemblPlants:AT3G28540.1 GeneID:822484 KEGG:ath:AT3G28540
TAIR:At3g28540 InParanoid:Q9LH82 OMA:IITEAYL PhylomeDB:Q9LH82
ProtClustDB:CLSN2685225 ArrayExpress:Q9LH82 Genevestigator:Q9LH82
Uniprot:Q9LH82
Length = 510
Score = 1246 (443.7 bits), Expect = 6.8e-127, P = 6.8e-127
Identities = 254/475 (53%), Positives = 338/475 (71%)
Query: 2 ESKDLFTSLGSIIASGMFLWAMFQQYFPYELRHNIEKYSQRLVSFFYPYVQITFNEFTGD 61
E+ LF G+ +AS MF W++++Q+ PY++R +EK ++ V I F E+T D
Sbjct: 3 EAGGLFGFTGTTMASLMFFWSVYRQFVPYQIRDYLEKCFYKMFGLVSNSVHIKFTEYTED 62
Query: 62 RFMR-SEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWW 120
+ ++ S+AY I NYLSSKS+ +A+RLKA+ KNS +SLVLS+D+HE V D FQG+K+ W
Sbjct: 63 KGLKKSQAYDLIRNYLSSKSTARAQRLKANESKNS-KSLVLSLDNHEAVEDVFQGVKVVW 121
Query: 121 SSGKHISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRKL 180
S S Q S EKRY L+FH R+R++I YL VL+EG+EI ++NR RKL
Sbjct: 122 SLSVWKSNDQADS-----SEKRYLTLSFHNRYREMITTTYLDHVLREGKEIGLKNRERKL 176
Query: 181 YTNNGSN---------WVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGR 231
YTNN S W +V F+HPATF+TLAM+ +K+ + DLI F+K +D+Y ++G+
Sbjct: 177 YTNNSSQDYSAWREGRWSNVPFDHPATFETLAMDLEKKEGMKKDLIKFTKGKDYYRKVGK 236
Query: 232 AWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVI 291
WKRGYLL+GPPGTGKSTMI+AMAN L YD+YDLELT VKDN+EL+KL+++T KSI+VI
Sbjct: 237 PWKRGYLLFGPPGTGKSTMISAMANFLEYDVYDLELTTVKDNSELKKLMLDTKGKSIVVI 296
Query: 292 EDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQ--KLGKEERETNNSQVTLSGLLNFIDGLW 349
EDIDCSLDLTGQR+ ++ KL K ER S+VTLSGLLN IDGLW
Sbjct: 297 EDIDCSLDLTGQRKKKKEEDEDEEEEEKKKEAEKLLKRERGERESKVTLSGLLNAIDGLW 356
Query: 350 SACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIESHNLFD 409
SAC GE++IVFTTNY++KLDPALIR+GRMD HIE+S+C +EAFKVLAKNYL IESH+LF
Sbjct: 357 SACSGEKIIVFTTNYLDKLDPALIRRGRMDNHIEMSYCRFEAFKVLAKNYLEIESHDLFG 416
Query: 410 KIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLNQALELAKEEARRVKVDDK 464
+I L+ E M+PADVAE+LMPK+ D + L L ++LE KE+A+++ ++K
Sbjct: 417 EIKRLVEETDMSPADVAENLMPKSDEDDADICLTRLVKSLEEEKEKAKKLAEEEK 471
>TAIR|locus:2095537 [details] [associations]
symbol:AT3G28610 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042991 "transcription factor import into nucleus"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AP000420 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00535388
RefSeq:NP_189502.2 UniGene:At.50994 ProteinModelPortal:Q9LJJ5
SMR:Q9LJJ5 DNASU:822491 EnsemblPlants:AT3G28610.1 GeneID:822491
KEGG:ath:AT3G28610 TAIR:At3g28610 InParanoid:Q9LJJ5 OMA:KETNIAP
PhylomeDB:Q9LJJ5 ProtClustDB:CLSN2685234 Genevestigator:Q9LJJ5
Uniprot:Q9LJJ5
Length = 474
Score = 1126 (401.4 bits), Expect = 3.5e-114, P = 3.5e-114
Identities = 241/481 (50%), Positives = 326/481 (67%)
Query: 11 GSIIASGMFLWAMFQQYFPYELRHNIE--------------KYSQRLVSFFYPYVQITFN 56
GS +AS FLWA QQ FP L+ I+ ++S + ++FF PYVQI F+
Sbjct: 7 GSSLASLFFLWATIQQIFPNHLKIAIKEFFLSTIQQISFAKRFSDKFINFFSPYVQINFS 66
Query: 57 EFTGDRFMRSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGI 116
E+ R + A+ IE YL +K++ +AK L+A ++ S + LVL D+ +V DE++GI
Sbjct: 67 EYEDYRV--NHAFDPIETYLGAKATDKAKHLRASQVRES-KGLVLKRDE-TKVRDEYEGI 122
Query: 117 KLWWSSGKHISKSQVFSFYPATDEKRY--YKLTFHKRHRDLILGPYLVSVLKEGREIKVR 174
++WW TD Y KLTFH+R RD++ Y+ V++EG+ I +
Sbjct: 123 RVWWEM--------------ETDSAGYKTLKLTFHRRSRDIVTNSYIKYVVEEGKSIDAK 168
Query: 175 NRMRKLYTNN-----GSN----WVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDF 225
N+ KL+TNN GS+ W ++ FEHPATF+TLAM+P +K++I++DL AF+ +D+
Sbjct: 169 NKKMKLFTNNPSSHWGSSKTSFWRYIDFEHPATFETLAMDPKKKEQILNDLAAFNNGKDY 228
Query: 226 YARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSS 285
Y +IG+AWKRGYLLYGPPGTGKSTMIAAMANLL Y +YDLELTA+++N+ELRK+L TS+
Sbjct: 229 YKKIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYSIYDLELTAIQNNSELRKILTATSN 288
Query: 286 KSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFI 345
KSIIVIEDIDCSLDLTG+R+ +K G ++ E N S VTLSGLLNFI
Sbjct: 289 KSIIVIEDIDCSLDLTGKRKKKESNLMIW-------RKDGDQDNEENKSFVTLSGLLNFI 341
Query: 346 DGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIESH 405
DG+WSACG ER+IVFTTN++ KLDPALIR+GRMD HIELS+C++EAFK LAKNYL+++SH
Sbjct: 342 DGIWSACGQERIIVFTTNHLAKLDPALIRRGRMDMHIELSYCTFEAFKTLAKNYLDLDSH 401
Query: 406 NLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLNQALELAKEEARRVKVDD-K 464
LF KI L+ E + PADVAE+LM K D + SL L ++LE K++ + +VD+ K
Sbjct: 402 PLFSKIESLMKETNIAPADVAENLMKKNRETDADGSLNDLIESLE-RKKKVQIAQVDEHK 460
Query: 465 E 465
E
Sbjct: 461 E 461
>TAIR|locus:2178057 [details] [associations]
symbol:AT5G40000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00516295 RefSeq:NP_198816.1 UniGene:At.51146
ProteinModelPortal:F4KFX5 SMR:F4KFX5 EnsemblPlants:AT5G40000.1
GeneID:833997 KEGG:ath:AT5G40000 OMA:ISAMANY Uniprot:F4KFX5
Length = 470
Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
Identities = 245/487 (50%), Positives = 331/487 (67%)
Query: 5 DLFTSLGSIIASGMFLWAMFQQYFPYELRHNIEKY----------SQRL----VSFFYPY 50
D F S+GS +AS FLWA QQ FP L+ I+++ +QR+ + F PY
Sbjct: 6 DSFGSIGSSMASLFFLWATIQQIFPDHLKITIKEFLLSSFQQLCFAQRVSDHFTNLFSPY 65
Query: 51 VQITFNEFTGDRFMRSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVA 110
V+I F E D + ++A+SAI+ YL SK++ + K L+ +K S + LVL ++ +V
Sbjct: 66 VEIHFPE--SDEYSFNQAFSAIDTYLDSKATDKTKHLRGSQVKES-KGLVLKRNE-AKVR 121
Query: 111 DEFQGIKLWWSSGKHISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGRE 170
DE++G +WW +V D RYYKLTFH R R LI Y+ V++EG+
Sbjct: 122 DEYKGANVWWE--------RVVD----NDGNRYYKLTFHNRARTLITNSYIKYVVEEGKS 169
Query: 171 IKVRNRMRKLYTNN-------GSN-WVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKS 222
I V+N+ +L+TNN G N W + FEHPA+FQTLAM+P +K+EI++DLIAFS
Sbjct: 170 IIVKNKQTRLFTNNLSTQWVFGQNMWRSIEFEHPASFQTLAMDPKKKEEIVNDLIAFSNG 229
Query: 223 EDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIE 282
+++Y +IG+AWKRGYLLYGPPGTGKSTMI+AMANLL Y++YDLELTAVK+N+EL+KLL
Sbjct: 230 KEYYKKIGKAWKRGYLLYGPPGTGKSTMISAMANLLNYNIYDLELTAVKNNSELKKLLTA 289
Query: 283 TSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLL 342
TSSKSIIVIEDIDCS D T R R++ GKE+++ N+ VTLSGLL
Sbjct: 290 TSSKSIIVIEDIDCSADFTSNR---------IKKESNSRERYGKEDKDENS--VTLSGLL 338
Query: 343 NFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNI 402
NFIDG+WSACG ER++VFTTN++EKLDPALIR+GRMD HIELS+C+YEAFK+LAKNYL++
Sbjct: 339 NFIDGIWSACGQERIVVFTTNHLEKLDPALIRRGRMDMHIELSYCTYEAFKILAKNYLDL 398
Query: 403 E---SHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLNQALELAKEEARRV 459
+ +H LF +I LL E K++PADVAE+LM + DV+ SL L ALE + + +R
Sbjct: 399 DGDDAHPLFSEIKALLEETKISPADVAENLMARNQQIDVDKSLNLLISALE-EENQYQRS 457
Query: 460 KVDDKEA 466
+ + K++
Sbjct: 458 QQEKKKS 464
>TAIR|locus:2095532 [details] [associations]
symbol:AT3G28600 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00518678 RefSeq:NP_189501.2 UniGene:At.42766
ProteinModelPortal:F4J0C0 SMR:F4J0C0 DNASU:822490
EnsemblPlants:AT3G28600.1 GeneID:822490 KEGG:ath:AT3G28600
OMA:TISHRVA ArrayExpress:F4J0C0 Uniprot:F4J0C0
Length = 477
Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
Identities = 240/480 (50%), Positives = 326/480 (67%)
Query: 9 SLGSIIASGMFLWAMFQQYFPYELRHNI--------------EKYSQRLVSFFYPYVQIT 54
+ GS +AS FLWA QQ FP LR I +++S R ++FF PYV+I+
Sbjct: 6 TFGSSLASLFFLWATIQQIFPNHLRIAIKEFLISTIQQLSFVQRFSDRFINFFSPYVEIS 65
Query: 55 FNEFTGDRFMRSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQ 114
F+++ +F + A++AIE YL +K++ +AK L+A +K S + LVL D+ +V DE++
Sbjct: 66 FSQYEDYQF--NHAFAAIETYLGAKATDKAKHLRASQVKES-KGLVLKRDE-TKVRDEYE 121
Query: 115 GIKLWWSSGKHISKSQVFSFYPATDEKRY--YKLTFHKRHRDLILGPYLVSVLKEGREIK 172
G +WW TD Y +KLTFH+R RD++ Y+ V +EG+ I+
Sbjct: 122 GGTVWWEM--------------ETDSTGYRTFKLTFHRRSRDIVTDSYIKYVFEEGKSIQ 167
Query: 173 VRNRMRKLYTNNGSN---------WVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSE 223
+++ KL+TNN S+ W ++ FEHPA+F TLAM+ +K+EI++DL AFS +
Sbjct: 168 AKSKQMKLFTNNPSSHWGTSKKSFWRYIDFEHPASFHTLAMDTKKKEEILNDLAAFSNGK 227
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIET 283
++Y +IG+AWKRGYLL+GPPGTGKSTMIAAMAN L Y +YDLELTA+++N+ELRKLL T
Sbjct: 228 EYYKKIGKAWKRGYLLHGPPGTGKSTMIAAMANHLNYSIYDLELTAIRNNSELRKLLTAT 287
Query: 284 SSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLN 343
SSKSIIVIEDIDCSLDLTG+R+ R+ G++ E + S VTLSGLLN
Sbjct: 288 SSKSIIVIEDIDCSLDLTGKRKKEKNLMTS-------RED-GEQGTEEDKSFVTLSGLLN 339
Query: 344 FIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIE 403
FIDG+WSACG ER+I+FTTN+ EKLDPALIR+GRMD HIELS+CS+EAFK+LAKNYL+++
Sbjct: 340 FIDGIWSACGQERIIIFTTNHFEKLDPALIRRGRMDMHIELSYCSFEAFKILAKNYLDLD 399
Query: 404 SHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLNQALELAKEEARRVKVDD 463
+H LF KI LL E K+ PADVAE+LM K D + SL+ L QALE K++ +VD+
Sbjct: 400 THPLFKKIESLLKETKIAPADVAENLMKKNTEIDADGSLKDLIQALE-GKKKIHGAQVDE 458
>TAIR|locus:2098638 [details] [associations]
symbol:AT3G28520 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00524283 RefSeq:NP_189493.1 UniGene:At.53541
ProteinModelPortal:F4J0B1 SMR:F4J0B1 PRIDE:F4J0B1
EnsemblPlants:AT3G28520.1 GeneID:822482 KEGG:ath:AT3G28520
OMA:YLENESH ArrayExpress:F4J0B1 Uniprot:F4J0B1
Length = 478
Score = 1113 (396.9 bits), Expect = 8.4e-113, P = 8.4e-113
Identities = 237/466 (50%), Positives = 314/466 (67%)
Query: 14 IASGMFLWAMFQQYFPYELR----HNIEKYSQRLVSFFYPYVQITFNEFTGDRFMRSEAY 69
+AS MFLW M++Q+ PY+LR + I+KY +L +V I F E+TG+ +S AY
Sbjct: 1 MASIMFLWPMYKQFVPYQLREYLENTIQKYLDKLFRRDSNFVYIRFPEYTGEGLSKSRAY 60
Query: 70 SAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWWSSGKHISKS 129
I NYLSS S+ +AKRLKA +NS +SLVL +DD E V FQG+ + WSS + K
Sbjct: 61 DEIGNYLSSISTARAKRLKAKESENS-KSLVLCLDDDEAVVVVFQGVNVVWSSTV-VDKE 118
Query: 130 QVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRKLYTNNGSN-- 187
+ + E RY LTF HRD+I Y+ VL+EG+EI ++NR RKLYTNN S+
Sbjct: 119 DKHN----SKEGRYLTLTFENHHRDIITNTYIDHVLREGKEIALKNRERKLYTNNDSSSY 174
Query: 188 -------WVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLY 240
W +V F H A+F+TL M+ +K+EI DLI F+K +D+Y ++ + WKRGYLL+
Sbjct: 175 SSWWEGLWSNVPFNHHASFETLGMDLDKKEEIKKDLIKFTKGKDYYRKVAKPWKRGYLLF 234
Query: 241 GPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDL 300
GPPGTGKSTMI+A+AN L YD+YDLELT VKDN EL+KL+++T KSI+VIEDIDCSL+L
Sbjct: 235 GPPGTGKSTMISAIANFLEYDVYDLELTTVKDNAELKKLMLDTKGKSIVVIEDIDCSLEL 294
Query: 301 TGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVF 360
T + R + L K N S VTLSGLLN IDGLWSAC E++I+F
Sbjct: 295 T-EHRKKKKEEDEDKEEKKEAENL-KRVSGNNESNVTLSGLLNAIDGLWSACSDEKIIIF 352
Query: 361 TTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIESHNLFDKIGELLGEAKM 420
TTN+++ LDPALIR+GRMD HIE+S+C +EAFKVLAKNYL ESH+L+ +IG LL E +
Sbjct: 353 TTNFVDNLDPALIRRGRMDYHIEMSYCRFEAFKVLAKNYLENESHDLYGEIGRLLEEVDV 412
Query: 421 TPADVAEHLMPKTFPADVEFSLRSLNQALELAKEEARRVKVDDKEA 466
+PADVAE+LMPK+ D + R L ++LE E ++ K++ KEA
Sbjct: 413 SPADVAENLMPKSDEDDADICFRRLVKSLE----EEKKKKIE-KEA 453
>TAIR|locus:2095502 [details] [associations]
symbol:AT3G28570 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00542062 RefSeq:NP_189498.1 UniGene:At.53543
ProteinModelPortal:F4J0B7 SMR:F4J0B7 EnsemblPlants:AT3G28570.1
GeneID:822487 KEGG:ath:AT3G28570 OMA:IHAMELE Uniprot:F4J0B7
Length = 451
Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
Identities = 216/459 (47%), Positives = 307/459 (66%)
Query: 8 TSLGSIIASGMFLWAMFQQYFPYELRHNI----------EKYSQRLVSFFYPYVQITFNE 57
T +GS +A F+W+ ++YFP +++ + ++ S +++ FF PY I F E
Sbjct: 7 TRIGSNVAGLFFVWSTLKRYFPRQIQQLLFNAIQRIPIFKRLSDKILEFFSPYAYIRFRE 66
Query: 58 FTGDRFMRSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIK 117
G R+ + A++A++ YL +K +++ K LK + +K + SL L DD ++ +E++G+K
Sbjct: 67 IEGYRY--NYAFAAVKTYLGAKVNSEVKNLKGNQVKEN-MSLDLKRDD-VKIEEEYEGVK 122
Query: 118 LWWSSGKHISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRM 177
+WW ++F K+ +LTFH+ + D++ G YL V++EG+ IK R +
Sbjct: 123 MWW---------EIFR---CVKGKKICRLTFHRSNWDVVTGSYLRYVVEEGKSIKARKKK 170
Query: 178 RKLYTNNGS-NWVHVV--------FEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYAR 228
+ NN S NW + FEHPATF TLAM+ +K EI DL+AF +++Y R
Sbjct: 171 VMVLMNNPSLNWKTSMKGLWTCTEFEHPATFDTLAMDIDKKDEIFRDLVAFRDGKEYYDR 230
Query: 229 IGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSI 288
IG+AWKRGYLLYGPPGTGKSTMIAAMANL+ Y++YDLELT++ +N EL+KLLI T++KSI
Sbjct: 231 IGKAWKRGYLLYGPPGTGKSTMIAAMANLMKYNIYDLELTSIGNNWELKKLLIATTNKSI 290
Query: 289 IVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGL 348
IVIEDIDCSLDLTG+R + G +E + +N+ VTLSGLLNFIDG+
Sbjct: 291 IVIEDIDCSLDLTGEREV--------------KDLKGDKEGKKSNA-VTLSGLLNFIDGI 335
Query: 349 WSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIESHNLF 408
WSACG ER++VFTTN++ KLD ALIR+GRMD HIELS+C++ AFK+LAKNYLNI+SH+LF
Sbjct: 336 WSACGQERILVFTTNHVGKLDQALIRRGRMDMHIELSYCTFGAFKILAKNYLNIDSHHLF 395
Query: 409 DKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLNQ 447
+I LL E K+TPADVAEH+M K ++ +R+L +
Sbjct: 396 GEIESLLKETKITPADVAEHMMAKEVDGSLKGLIRALER 434
>TAIR|locus:2174502 [details] [associations]
symbol:AT5G57480 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0465 GO:GO:0017111
EMBL:AB011482 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2687417 IPI:IPI00541799 RefSeq:NP_200556.1
UniGene:At.49428 ProteinModelPortal:Q9FKM3 SMR:Q9FKM3
EnsemblPlants:AT5G57480.1 GeneID:835852 KEGG:ath:AT5G57480
TAIR:At5g57480 InParanoid:Q9FKM3 OMA:HNNSELR PhylomeDB:Q9FKM3
Genevestigator:Q9FKM3 Uniprot:Q9FKM3
Length = 520
Score = 942 (336.7 bits), Expect = 1.1e-94, P = 1.1e-94
Identities = 209/479 (43%), Positives = 291/479 (60%)
Query: 4 KDLFTSLGSIIASGMFLWAMFQQYFPYELRHNIEKYSQRLVSFFYPYVQITFNEFTGDRF 63
K+ +TSL S++ F ++ Q FP ELR K+ R+ F Y E G
Sbjct: 2 KEYWTSLASLLGVLAFCQSLMQSIFPPELRFAFLKFFNRIFHVFSSYCYFDITEIDGVN- 60
Query: 64 MRSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWWSSG 123
+E Y+A++ YLSS S RL NSS S+ + +++ + D F G+ + W
Sbjct: 61 -TNELYNAVQLYLSSSVSIAGNRLSLTRAVNSS-SITFGLSNNDSIVDTFNGVTVLWEHV 118
Query: 124 KHISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRKLYTN 183
++Q F++ P +EKR + L K+ + LIL YL +++ EI+ +N+ R LYTN
Sbjct: 119 VTQRQTQTFAWRPLPEEKRGFTLRIKKKDKTLILNSYLDYIMERANEIRRKNQDRLLYTN 178
Query: 184 N--------GSNWVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKR 235
+ G W V F+HP+TF+TLAM+P +K++I+DDL F++ + FY + GRAWKR
Sbjct: 179 SRGGSLDSRGHPWESVPFKHPSTFETLAMDPRKKQQIMDDLKDFAEGQVFYQKTGRAWKR 238
Query: 236 GYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVIEDID 295
GYLLYGPPGTGKS+MIAAMAN LGYD+YDLELT V N+ELRKLL++TSSKSIIVIEDID
Sbjct: 239 GYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHSNSELRKLLMKTSSKSIIVIEDID 298
Query: 296 CSLDLTGQRRXXXXXXXXXXXXXXPRQKL------GKEERETNNSQVTLSGLLNFIDGLW 349
CS++LT +++ + G E N + +TLSGLLNF DGLW
Sbjct: 299 CSINLTNRKKNSSNVSSQRSYYDAETRNGSGSGSGGSGEEGGNGNTITLSGLLNFTDGLW 358
Query: 350 SACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLN--IESHN- 406
S CG ER+ VFTTN+IEKLDPAL+R GRMD HI +S C++ + K+L KNYL +E N
Sbjct: 359 SCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIYMSFCNFPSLKILLKNYLGYGVEDING 418
Query: 407 -LFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLNQALELAKEEARRVKVDDK 464
+ ++ ++ +A+MTPADV+E L+ D E ++R L + L+ E R VK D K
Sbjct: 419 DVLKEMEMVVEKAEMTPADVSEALIKNR--RDKEKAIRELLEDLKSRGE--RNVK-DGK 472
>TAIR|locus:505006520 [details] [associations]
symbol:AT4G25835 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 EMBL:AY075607 IPI:IPI00532146
RefSeq:NP_567730.1 UniGene:At.32228 ProteinModelPortal:Q8RY66
SMR:Q8RY66 PRIDE:Q8RY66 EnsemblPlants:AT4G25835.1 GeneID:828689
KEGG:ath:AT4G25835 TAIR:At4g25835 InParanoid:Q8RY66 OMA:IMEKANE
PhylomeDB:Q8RY66 ProtClustDB:CLSN2687417 Genevestigator:Q8RY66
Uniprot:Q8RY66
Length = 506
Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
Identities = 199/454 (43%), Positives = 279/454 (61%)
Query: 4 KDLFTSLGSIIASGMFLWAMFQQYFPYELRHNIEKYSQRLVSFFYPYVQITFNEFTGDRF 63
K+ +TSL S++ F ++ FP ELR I K + F + E G
Sbjct: 2 KEYWTSLASLLGVLAFCQSLMNSVFPPELRFAISKLFNKFFKLFSTFCYFDITEIDGVN- 60
Query: 64 MRSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWWSSG 123
+E Y+A++ YLSS S RL NSS S+ + +++ + D F + + W
Sbjct: 61 -TNELYNAVQLYLSSSVSIAGNRLSLTRAVNSS-SVTFGLSNNDSIVDTFNSVTVVWEHI 118
Query: 124 KHISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRKLYTN 183
++Q F++ P +EKR + L K+ ++LIL YL ++++ EI+ N+ R LYTN
Sbjct: 119 VTQRQTQTFAWRPMPEEKRGFTLRIKKKDKNLILDSYLDYIMEKANEIRRLNQDRLLYTN 178
Query: 184 N--------GSNWVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKR 235
+ G W V F+HP+TF TLAM+P +K++I++DL F++ + FY R GRAWKR
Sbjct: 179 SRGGSLDSRGLPWESVPFKHPSTFDTLAMDPVKKQQIMEDLKDFAECQSFYERTGRAWKR 238
Query: 236 GYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVIEDID 295
GYLLYGPPGTGKS+MIAAMAN L YD+YDLELT VK N+ELRKLL++TSSKSIIVIEDID
Sbjct: 239 GYLLYGPPGTGKSSMIAAMANYLRYDIYDLELTEVKSNSELRKLLMKTSSKSIIVIEDID 298
Query: 296 CSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGE 355
CS++LT + + LG + + N +TLSGLLNF DGLWS CG E
Sbjct: 299 CSINLTNRNKKQSTGSYNEPEMLTG-SGLGDDLGDGNT--ITLSGLLNFTDGLWSCCGSE 355
Query: 356 RLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIESHNLFD----KI 411
R+ VFTTN+IEKLDPAL+R GRMD HI +S+C++ + K+L +NYL E +L D ++
Sbjct: 356 RIFVFTTNHIEKLDPALLRSGRMDMHIHMSYCTFSSVKILLRNYLGFEEGDLNDVVLKEL 415
Query: 412 GELLGEAKMTPADVAEHLMPKTFPADVEFSLRSL 445
E++ A++TPADV+E L+ D E ++R L
Sbjct: 416 AEVVDRAEITPADVSEALIKNR--RDKERAVREL 447
>TAIR|locus:2078007 [details] [associations]
symbol:AT3G50940 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363 EMBL:BT026134
IPI:IPI00532009 RefSeq:NP_190663.2 UniGene:At.35440
ProteinModelPortal:Q147F9 SMR:Q147F9 PaxDb:Q147F9 PRIDE:Q147F9
EnsemblPlants:AT3G50940.1 GeneID:824258 KEGG:ath:AT3G50940
TAIR:At3g50940 HOGENOM:HOG000237995 InParanoid:Q147F9 OMA:DCSIELK
PhylomeDB:Q147F9 ProtClustDB:CLSN2680378 Genevestigator:Q147F9
Uniprot:Q147F9
Length = 451
Score = 581 (209.6 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 120/306 (39%), Positives = 194/306 (63%)
Query: 3 SKDLFTSLGSIIASGMFLWAMFQQYFPYELRHNIEKYSQRLVSFFYPYVQITFNEFTGDR 62
+K T++ S+ A+ + ++ Q Y P E+ I +R S+F + EF G
Sbjct: 12 AKTALTAVASVAAAAILARSVVQDYMPNEVHEYISHGFRRFFSYFSYQMTAVIEEFGG-- 69
Query: 63 FMRSEAYSAIENYLSSKSSTQAKRLKADII-KNSSQSLVLSMDDHEEVADEFQGIKLWWS 121
F ++ + A E YLS+K S +R+K + + K S+ S+ + D EEV D F G+KL W
Sbjct: 70 FEHNQVFEAAEAYLSTKISNSTRRIKVNKLEKQSNYSVTVERD--EEVVDIFDGVKLSWI 127
Query: 122 SG-KHISKSQVFS--FYPAT--DEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNR 176
+H+ K + +T E R Y+L+F K+ ++++L YL V+++ IK + +
Sbjct: 128 LVCRHVDKKDFRNPRDLNSTLKSEVRSYELSFRKKFKNMVLESYLPFVVEQAASIKQKFK 187
Query: 177 MRKLYTNNGSN--WVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWK 234
K++T + + W V +HP+TF+TLA++P KK +++DL F + + FY R+G+AWK
Sbjct: 188 TLKIFTVDSYSVEWTSVTLDHPSTFRTLALDPEVKKNLVEDLDRFVQRKGFYGRVGKAWK 247
Query: 235 RGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVIEDI 294
RGYLLYGPPGTGKS++IAA+AN L +D+YDL+LT++ +N ELR+LL+ T+++SI+V+EDI
Sbjct: 248 RGYLLYGPPGTGKSSLIAAIANHLNFDIYDLDLTSLNNNAELRRLLMSTANRSILVVEDI 307
Query: 295 DCSLDL 300
DCS++L
Sbjct: 308 DCSIEL 313
Score = 353 (129.3 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 71/129 (55%), Positives = 93/129 (72%)
Query: 326 KEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELS 385
+E + + VTLSGLLNF+DGLWS+CG ER+IVFTTNY EKLDPAL+R GRMD HI +S
Sbjct: 320 QENNDPLHKTVTLSGLLNFVDGLWSSCGNERIIVFTTNYREKLDPALLRPGRMDMHIHMS 379
Query: 386 HCSYEAFKVLAKNYLNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSL 445
+C+ AFKVLA NYL I+ H LF++I E + E ++TPA+VAE LM V+ L+ L
Sbjct: 380 YCTPAAFKVLASNYLEIQDHILFEQIEEFIREIEVTPAEVAEQLMRSD---SVDKVLQGL 436
Query: 446 NQALELAKE 454
+ L+ K+
Sbjct: 437 VEFLKAKKQ 445
>TAIR|locus:2128916 [details] [associations]
symbol:AT4G30250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00517260 RefSeq:NP_194754.2 UniGene:At.65015
ProteinModelPortal:F4JPK8 SMR:F4JPK8 EnsemblPlants:AT4G30250.1
GeneID:829148 KEGG:ath:AT4G30250 Uniprot:F4JPK8
Length = 519
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 199/466 (42%), Positives = 278/466 (59%)
Query: 5 DLFTSLGSIIASGMFLWAMFQQYFPYELRHNIEKYSQRLVSFFYPYVQITFNEFTGDRFM 64
D +T++ S++ F + Q FP ELR + R+ F ++ E G
Sbjct: 3 DYWTTMASLLGMLAFCQTIVQLVFPPELRLAFLHFLTRIRHVFSSHIYFDITEIDGVN-- 60
Query: 65 RSEAYSAIENYLSSK--------SSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGI 116
+E Y+A++ YLSS SS RL + NSS S+ + +++ + D F G+
Sbjct: 61 TNELYNAVQLYLSSSVTVNDAVSSSNNNTRLSLTRVPNSS-SVTFGLSNNDRITDVFNGV 119
Query: 117 KLWWSSGKHISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNR 176
+ W + Q FS+ P +EKR + L +KR + L+L YL ++ + EI+ RN
Sbjct: 120 TILWEHVVVQRQVQSFSWRPMPEEKRGFTLQINKRDKALVLDSYLDYIVGKSEEIRRRNE 179
Query: 177 MRKLYTNN-GSN-------WVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYAR 228
R LYTN+ G + W V F+HP+TF TLAM+P +KK I++DL F+ + FY +
Sbjct: 180 ERLLYTNSRGVSLDARSHPWDSVRFKHPSTFDTLAMDPEKKKRIMEDLREFANGQGFYQK 239
Query: 229 IGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSI 288
GRAWKRGYLLYGPPGTGKS++IAAMAN LGYD+YDLELT V++N+ELRKLL++TSSKSI
Sbjct: 240 TGRAWKRGYLLYGPPGTGKSSLIAAMANYLGYDIYDLELTEVQNNSELRKLLMKTSSKSI 299
Query: 289 IVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGL 348
IVIEDIDCS+ LT + + G EE S VTLSGLLNF DGL
Sbjct: 300 IVIEDIDCSISLTKRGKNKKKNGSYEYDPGLTNGS-GLEEP---GSSVTLSGLLNFTDGL 355
Query: 349 WSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIESHNL- 407
WS CG E++ VFTTN+IEKLD AL+R GRMD H+ + C + A K+L KNYL +E ++
Sbjct: 356 WSCCGSEKIFVFTTNHIEKLDSALMRSGRMDMHVHMGFCKFPALKILLKNYLRLEEEDMD 415
Query: 408 ---FDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLNQALE 450
++ E + EA++TPADV+E L+ +D E ++R + L+
Sbjct: 416 SVVLKEMEECVEEAEITPADVSEVLIRNR--SDAEKAVREIVSVLK 459
>TAIR|locus:2077997 [details] [associations]
symbol:BCS1 "cytochrome BC1 synthesis" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009612
"response to mechanical stimulus" evidence=RCA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0009697 "salicylic
acid biosynthetic process" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002686 GO:GO:0017111
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2680378 EMBL:AY064981 EMBL:BT002611 IPI:IPI00548437
RefSeq:NP_190662.2 UniGene:At.23776 ProteinModelPortal:Q8VZG2
SMR:Q8VZG2 STRING:Q8VZG2 PRIDE:Q8VZG2 EnsemblPlants:AT3G50930.1
GeneID:824257 KEGG:ath:AT3G50930 TAIR:At3g50930 InParanoid:Q8VZG2
OMA:QLMRSDE PhylomeDB:Q8VZG2 Genevestigator:Q8VZG2 Uniprot:Q8VZG2
Length = 576
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 198/479 (41%), Positives = 282/479 (58%)
Query: 3 SKDLFTSLGSIIASGMFLWAMFQQYFPYELRHNIEKYSQRLVSFFYPYVQITFNEFTGDR 62
+K + T+ S+ A+ M ++ Q Y P E+ H I + + +F + I EF G
Sbjct: 58 AKTVLTTAASVAATAMLARSLVQDYLPDEVHHYISYGFRSIFGYFSSQMTIIIEEFEG-- 115
Query: 63 FMRSEAYSAIENYLSSKSSTQAKRLKADII-KNSSQSLVLSMDDHEEVADEFQGIKLWWS 121
F +E + A E YL++K S KR+K K ++ ++ + D EEV D + G+K W
Sbjct: 116 FAHNEVFEAAEAYLATKISPSNKRIKVSKHEKENNYNVTVERD--EEVVDTYNGVKFQWI 173
Query: 122 SG-KHISKSQVFS--FYPAT--DEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNR 176
+H+ + +T E R ++L FHK+ +D+ L YL ++K +K +
Sbjct: 174 LHCRHVESKHFHNPRDLNSTLRSEVRSFELNFHKKFKDVALESYLPFMVKRATLMKQEKK 233
Query: 177 MRKLYTNNGSN--------WVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYAR 228
K++T + N W V +HP+TF+TLAM+ K +++DL F K DFY R
Sbjct: 234 TLKIFTLSPENMYGNYSDAWTSVTLDHPSTFKTLAMDSDVKTSVMEDLDKFVKRRDFYKR 293
Query: 229 IGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSI 288
+G+AWKRGYLLYGPPGTGKS++IAAMAN L +D+YDLELTAV +N+ELR+LLI T+++SI
Sbjct: 294 VGKAWKRGYLLYGPPGTGKSSLIAAMANHLNFDIYDLELTAVNNNSELRRLLIATANRSI 353
Query: 289 IVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGL 348
+++EDIDCSL+L + R PR K +VTLSGLLNFIDGL
Sbjct: 354 LIVEDIDCSLEL--KDRTSDEPPRESDDIEDPRYK-----------KVTLSGLLNFIDGL 400
Query: 349 WSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIESHNLF 408
WS+CG ER+I+FTTNY EKLD AL+R GRMD HI +S+C+ FK LA NYL I+ H LF
Sbjct: 401 WSSCGDERIIIFTTNYKEKLDAALLRPGRMDMHIHMSYCTPSTFKALALNYLEIKEHRLF 460
Query: 409 DKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLNQALELAK--EEARRVKVDDKE 465
KI E + ++TPA+VAE LM V+ L L + L++ K E + K + +E
Sbjct: 461 SKIEEGIEATEVTPAEVAEQLMRND---SVDKVLEGLIEFLKVKKIENEQDKAKTEKQE 516
>TAIR|locus:1005716649 [details] [associations]
symbol:AT2G18193 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 EMBL:BT026385 EMBL:AK118992
EMBL:AK175187 EMBL:AK175325 EMBL:AK176580 IPI:IPI00520678
RefSeq:NP_849972.1 UniGene:At.40029 ProteinModelPortal:Q8GW96
SMR:Q8GW96 PRIDE:Q8GW96 EnsemblPlants:AT2G18193.1 GeneID:816333
KEGG:ath:AT2G18193 TAIR:At2g18193 InParanoid:Q8GW96 OMA:IRSMANE
PhylomeDB:Q8GW96 ProtClustDB:CLSN2690765 Genevestigator:Q8GW96
Uniprot:Q8GW96
Length = 495
Score = 556 (200.8 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 126/309 (40%), Positives = 187/309 (60%)
Query: 6 LFTSLGSIIASGMFLWAMFQQYFPYELRHNIEKYSQRLVSFFYP---YVQITFNEFTGDR 62
LF++ S+ M +M + P +LR +S L FF P Y+ + +E G
Sbjct: 14 LFSAYASLTGFLMLFRSMLHDFVPEKLR---SYFSSLLDRFFTPKSKYLTVIIDENFG-- 68
Query: 63 FMRSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWWSS 122
R++ + A E YL SK + +RL+ I +S++ EE+ D F+ ++ WS
Sbjct: 69 LNRNQVFDAAEMYLRSKIGPETERLRVGKIPKQKH-FTISIERGEEILDTFEESEVKWSY 127
Query: 123 GKHISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRKLYT 182
+ S+++ KRYY+LTF K+ RD +L YL V+ E EIK R+ KLY+
Sbjct: 128 VQ--SENE-----KGDKVKRYYELTFEKKLRDKVLNSYLTHVVAESEEIKRNLRVVKLYS 180
Query: 183 NN-----------GSNWVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGR 231
+ G NW + EHP+TF TLAM+P KK+IIDDL F K ++FY R+G+
Sbjct: 181 RDVYASDDDDGMAGGNWGCINLEHPSTFDTLAMDPNAKKKIIDDLERFLKRKEFYKRVGK 240
Query: 232 AWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVI 291
AWKRGYLLYGPPGTGKS++IAAMAN L +D++DLEL+++ DN EL+++L+ T+++SI+VI
Sbjct: 241 AWKRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLELSSIYDNGELKRVLLSTTNRSILVI 300
Query: 292 EDIDCSLDL 300
EDIDC+ ++
Sbjct: 301 EDIDCNAEV 309
Score = 298 (110.0 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 63/136 (46%), Positives = 89/136 (65%)
Query: 327 EERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSH 386
+E E +VTLSG+LNFIDGLWS+ G ER+IVFTTN+ E+LDPAL+R GRMD HI +S+
Sbjct: 317 QEDEQIKGKVTLSGILNFIDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDVHINMSY 376
Query: 387 CSYEAFKVLAKNYLNIE--SHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRS 444
C+ F+ L NYL ++ +H L ++I L+ ++TPA++AE LM D + LR
Sbjct: 377 CTGLGFRTLVSNYLGLDGLNHPLCEEIEALVDSTEVTPAELAEELMQDD---DTDVVLRG 433
Query: 445 LNQALELAKEEARRVK 460
+ +E K E + K
Sbjct: 434 VISFVEKRKVERSKTK 449
Score = 39 (18.8 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 6/24 (25%), Positives = 17/24 (70%)
Query: 323 KLGKEERETNNSQVTLSGLLNFID 346
+L +E + +++ V L G+++F++
Sbjct: 416 ELAEELMQDDDTDVVLRGVISFVE 439
>TAIR|locus:2175986 [details] [associations]
symbol:AT5G17760 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 EMBL:CP002688 HSSP:Q01853 GO:GO:0017111
EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00548078 RefSeq:NP_850841.1 UniGene:At.23914
ProteinModelPortal:Q9FN75 SMR:Q9FN75 PRIDE:Q9FN75
EnsemblPlants:AT5G17760.1 GeneID:831644 KEGG:ath:AT5G17760
TAIR:At5g17760 InParanoid:Q9FN75 OMA:KQHDVQL PhylomeDB:Q9FN75
ProtClustDB:CLSN2686349 Genevestigator:Q9FN75 Uniprot:Q9FN75
Length = 505
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 188/481 (39%), Positives = 281/481 (58%)
Query: 6 LFTSLGSIIASGMFLWAMFQQYFPYELRHNIEKYSQRLVSFFYPYVQITFNEFTGDRFMR 65
+FT+ S+ M + +M + P L+ I + + R + F +T + M
Sbjct: 13 VFTAYASMAGYMMMIRSMAHELIPAPLQDFIYR-TLRSLFFRSSSSTLTLTIDDDNMGMN 71
Query: 66 SEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLV-LSMDDHEEVADEFQGIKLWW---- 120
+E Y A + YLS+K S A RL+ I K V L + D E V D ++ ++L W
Sbjct: 72 NEIYRAAQTYLSTKISPDAVRLR--ISKGHKDKHVNLYLSDGEIVNDVYEDVQLVWRFVT 129
Query: 121 ------SSGKHIS-KSQVFSFYPATDE---KRYYKLTFHKRHRDLILGPYLVSVLKEGRE 170
G + + D+ Y++L+F K+H+DLIL Y+ + + +E
Sbjct: 130 DGGDKKGGGGGVGGRGGGGGRRGGMDDDGKSEYFELSFDKKHKDLILNSYVPYIESKAKE 189
Query: 171 IKVRNRMRKLYTNNGSNWVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIG 230
I+ R+ L++ N W V+ EHP+TF+T+AME K+++I+DL F + ++FY R+G
Sbjct: 190 IRDERRILMLHSLNSLRWESVILEHPSTFETMAMEDDLKRDVIEDLDRFIRRKEFYKRVG 249
Query: 231 RAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIV 290
+AWKRGYLLYGPPGTGKS+++AAMAN L +D+YDL+L +V +++LR+LL+ T ++SI+V
Sbjct: 250 KAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVYDLQLASVMRDSDLRRLLLATRNRSILV 309
Query: 291 IEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWS 350
IEDIDC++DL + P + GK E+ +TLSGLLNFIDGLWS
Sbjct: 310 IEDIDCAVDLPNR-------------IEQPVE--GKNRGESQGP-LTLSGLLNFIDGLWS 353
Query: 351 ACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIES----HN 406
+CG ER+I+FTTN+ ++LDPAL+R GRMD HI + HCS++ FK LA NYL + H
Sbjct: 354 SCGDERIIIFTTNHKDRLDPALLRPGRMDMHIYMGHCSFQGFKTLASNYLGLSDAAMPHR 413
Query: 407 LFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFS-LRSLNQALELAKEEARRVKVDDKE 465
LF +I L+ MTPA VAE LM K+ ADV L ++ + + L +E+ V + KE
Sbjct: 414 LFPEIERLIDGEVMTPAQVAEELM-KSEDADVALEGLVNVLEKMRLKSKESNPVMMKQKE 472
Query: 466 A 466
+
Sbjct: 473 S 473
>TAIR|locus:2037186 [details] [associations]
symbol:AT1G43910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005783 EMBL:CP002684 GO:GO:0009506
GO:GO:0005524 GO:GO:0009737 GO:GO:0005794 HSSP:Q01853 GO:GO:0017111
EMBL:AC022314 UniGene:At.28764 UniGene:At.48277 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00548009 PIR:C96503 RefSeq:NP_175058.1
ProteinModelPortal:Q9LP11 SMR:Q9LP11 STRING:Q9LP11 PRIDE:Q9LP11
EnsemblPlants:AT1G43910.1 GeneID:840990 KEGG:ath:AT1G43910
InParanoid:Q9LP11 OMA:MWESTVF ProtClustDB:CLSN2679597
Genevestigator:Q9LP11 Uniprot:Q9LP11
Length = 475
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 181/455 (39%), Positives = 265/455 (58%)
Query: 6 LFTSLGSIIASGMFLWAMFQQYFPYELRHNIEKYSQRLVSFFYPYVQITFNEFTGDR--F 63
L+TS +I M + + P +R I + + V FF Y Q F R F
Sbjct: 17 LYTSFSAIT---MLFRTILNEIVPKRIREYI---AMKAVDFFSSYFQSDFTFVIEQRWEF 70
Query: 64 MRSEAYSAIENYLSS---KSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWW 120
+ ++ + A E YL + ST + + +KN + L + + ++ D F+GI L W
Sbjct: 71 VENQTFRAAEVYLPTCLAGLSTGKLLVGSSNLKNPAAEPKLGIPVNTKIIDNFEGIHLEW 130
Query: 121 SSGKHISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRKL 180
+ H +++ + P EKRY+ LT K R+ I+ Y + K +I K+
Sbjct: 131 TL--HSVETK--KYLP---EKRYFHLTCKKEFREKIMTDYFTYLAKSAEKIMSHRENLKI 183
Query: 181 YTNNG--SNWVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYL 238
YT N S W +FEH TF+TLA+EP KK +IDDL AFSK +DF+ +GRAWKRGYL
Sbjct: 184 YTYNQDRSKWESAIFEHHTTFETLAVEPDLKKTLIDDLDAFSKGKDFFKSVGRAWKRGYL 243
Query: 239 LYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVIEDIDCSL 298
LYGPPGTGKS+M+AA+AN + Y +YDL++ +V+D+ ELR++L T ++SI++IEDIDC
Sbjct: 244 LYGPPGTGKSSMVAAIANHMKYHIYDLQIQSVRDDGELREILTSTKNRSILLIEDIDCGA 303
Query: 299 DLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLI 358
D + +R+ P+++ K++ E ++LSGLLNF+DGLWS+CG E++I
Sbjct: 304 DASRRRQSKKKEEDGGEDDGEPQKR--KKKFEVG---ISLSGLLNFVDGLWSSCGEEKII 358
Query: 359 VFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIESHNLFDKIGELLGEA 418
+FTTN+ EKLDPAL+R GRMD HI + +C+ FK L YL + H LFD I +L+ E
Sbjct: 359 IFTTNHKEKLDPALLRPGRMDVHILMDNCTPFVFKKLVALYLKTDEHVLFDPIEKLILEV 418
Query: 419 KMTPADVAEHLMPKTFPADVEFSLRSLNQALELAK 453
TPA+V + LM AD+ +L+ L + LE K
Sbjct: 419 SSTPAEVTQQLMASK-NADI--ALKGLAEFLENKK 450
>TAIR|locus:2053109 [details] [associations]
symbol:AT2G18190 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI01020552 RefSeq:NP_179411.2 UniGene:At.66217
ProteinModelPortal:F4IQG2 SMR:F4IQG2 EnsemblPlants:AT2G18190.1
GeneID:816332 KEGG:ath:AT2G18190 OMA:TRINTDM ArrayExpress:F4IQG2
Uniprot:F4IQG2
Length = 494
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 184/476 (38%), Positives = 271/476 (56%)
Query: 1 MESKDLFTSLGSIIASGMFLWAMFQQYFPYELRHNIEKYSQRLVSFFYPY---VQITFNE 57
+ LFT+ S+ M ++F P LR I R FF P + + +E
Sbjct: 10 LSPSSLFTAYASLTGFLMLFRSLFNDEVPERLRSYITDLLNR---FFTPKSKNLTMVIDE 66
Query: 58 FTGDRFMRSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIK 117
G F R++ + A E YL +K + RL+ + + ++ EE+ D F+ +
Sbjct: 67 IIG--FKRNQVFDAAEVYLRNKIGPETARLRVGKLPKQKH-FTIYIEKGEEILDTFENSE 123
Query: 118 LWWSSGKHISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRM 177
L W+ + S+++ + EKRYY+LTF K+ RD ++ YL V+ E E K R
Sbjct: 124 LRWTYVE--SENEA-----SQKEKRYYELTFEKKLRDKVMNSYLSHVVAESEETKRDLRA 176
Query: 178 RKLYTNN-----------GSNWVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFY 226
KLY+ + G+ W + EHP+TF+TLAM+P KK+IIDD+ F K +FY
Sbjct: 177 VKLYSRDVRASKDDDGMAGAGWGCINLEHPSTFETLAMDPGAKKKIIDDMERFLKRREFY 236
Query: 227 ARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSK 286
R+G+AWKRGYLLYGPPGTGKS++IAAMAN L +D++DLEL+++ +N +L+ +L+ T+++
Sbjct: 237 KRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLELSSIYENAQLKSILLSTTNR 296
Query: 287 SIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFID 346
SI+VIEDIDCS R +E E +VTLSGLLNF+D
Sbjct: 297 SILVIEDIDCSSAEVVDREADEY----------------QEYEEGYYGRVTLSGLLNFVD 340
Query: 347 GLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIE--S 404
GLWS+ G ER+IVFTTN+ E+LDPAL+R GRMD HI +S+C+ F+ L NYL + +
Sbjct: 341 GLWSSFGDERIIVFTTNHKERLDPALLRPGRMDMHINMSYCTGLGFRTLVSNYLGLGGLN 400
Query: 405 HNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLNQALELAKEEARRVK 460
H L ++I L+ ++TPA++AE LM + D + LR + +E K E + K
Sbjct: 401 HPLCEEIEALIDSTEVTPAELAEELMQED---DTDVVLRGVVSFVENRKVEISKTK 453
>TAIR|locus:2175956 [details] [associations]
symbol:AT5G17740 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2686349 IPI:IPI00523930
RefSeq:NP_197276.1 UniGene:At.65521 ProteinModelPortal:Q9FN77
SMR:Q9FN77 EnsemblPlants:AT5G17740.1 GeneID:831642
KEGG:ath:AT5G17740 TAIR:At5g17740 InParanoid:Q9FN77 OMA:MINTIIP
PhylomeDB:Q9FN77 Genevestigator:Q9FN77 Uniprot:Q9FN77
Length = 533
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 178/471 (37%), Positives = 276/471 (58%)
Query: 6 LFTSLGSIIASGMFLWAMFQQYFPYELRHNIEKYSQRLVSFFYPYVQITFNEFTGDRFMR 65
+F++ S++ M + M P +++ + Y + + +T ++ + ++
Sbjct: 13 MFSTYASMMGYVMIIKPMINTIIPRPVQNFVFSYLKSFAGSRSSTLTLTIDQMSS-MYIP 71
Query: 66 SEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLV-LSMDDHEEVADEFQGIKLWWSS-G 123
E Y+A + YLS+K S + RL + ++ ++ V L + D E V+D + GIKL W
Sbjct: 72 DELYAAAQAYLSTKISPNSVRLI--MARDPAEKKVKLYLSDGEVVSDVYNGIKLKWRFLA 129
Query: 124 KHISKSQVFSF---YPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRKL 180
++ + + V + Y ++ +L+F K+HRDL++ Y+ V + +E+ + R+ K+
Sbjct: 130 RNKNNTMVEEYGQSYQGNIQRESLELSFDKKHRDLVVNSYIPYVESKAKEVNNKRRILKM 189
Query: 181 --YTNNGSNWVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYL 238
Y++ W V F+HP+TF T+AM K+ +I+DL F +DFY R+G+AWKRGYL
Sbjct: 190 HCYSHMAQTWQSVNFKHPSTFDTMAMNDDLKRSMIEDLDRFVGRKDFYKRVGKAWKRGYL 249
Query: 239 LYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVIEDIDCSL 298
LYGPPGTGKS+++AAMAN L +D+YDL+L +V+ + LR LL+ T++ SI++IEDIDCS+
Sbjct: 250 LYGPPGTGKSSLVAAMANYLKFDIYDLQLASVQGDAHLRSLLLATNNSSILLIEDIDCSV 309
Query: 299 DLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLI 358
DL + + Q LG + + +TLSGLLN IDGLWS+CG ER+I
Sbjct: 310 DLPTRLQPPTETS----------QPLGAVQV---SKPLTLSGLLNCIDGLWSSCGNERII 356
Query: 359 VFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYL-----NIESHNLFDKIGE 413
+FTTN EKLDPAL+R GRMD HI + HCS++ FK LA NYL N ++H L I
Sbjct: 357 IFTTNNKEKLDPALLRPGRMDMHIYMGHCSFQGFKTLASNYLGLSDENDDTHPLCPDIKH 416
Query: 414 LLGEAKMTPADVAEHLMPKTFPADVEFSLRSLNQALELAKEEARRVKVDDK 464
L+ +TPA VAE LM D + +L L + L+ + E + K DD+
Sbjct: 417 LIDGHVLTPAQVAEELMKDE---DADAALEGLVKVLKRKRLEPK--KCDDE 462
>TAIR|locus:2175946 [details] [associations]
symbol:AT5G17730 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AB006706 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2686349 IPI:IPI00546054 RefSeq:NP_197275.1
UniGene:At.54888 ProteinModelPortal:Q9FN78 SMR:Q9FN78 PRIDE:Q9FN78
EnsemblPlants:AT5G17730.1 GeneID:831641 KEGG:ath:AT5G17730
TAIR:At5g17730 InParanoid:Q9FN78 OMA:DINCTIE PhylomeDB:Q9FN78
Genevestigator:Q9FN78 Uniprot:Q9FN78
Length = 470
Score = 457 (165.9 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 92/244 (37%), Positives = 156/244 (63%)
Query: 64 MRSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLV-LSMDDHEEVADEFQGIKLWWSS 122
M +E Y A + Y+S+K + A+RL+ I ++ S+ V + E V+D +QGI++ W
Sbjct: 70 MYNELYGAAQVYISTKVNHNAERLR--ISRDRSEKNVNIHFSVGEVVSDIYQGIEVKWRF 127
Query: 123 GKHISKSQVFSFY----PATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMR 178
+KS + ++ ++ +L+F K+H +L+L Y+ V + + I ++
Sbjct: 128 CVDSNKSNMVHYFGEHFKLNPDRECVELSFEKKHTELVLNSYIPYVESKAKVINNERKIL 187
Query: 179 KLYTNNGS--NWVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRG 236
K+Y+ W V EHP+TF T+AM K+ ++ DL F + +DFY R+G+ WKRG
Sbjct: 188 KMYSYCCMYLKWQSVNLEHPSTFDTMAMNEELKRSVMGDLDRFIRRKDFYKRVGKPWKRG 247
Query: 237 YLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVIEDIDC 296
YLLYGPPGTGK++++AA+AN L +D+YDL+L +V+++ +LR+LL+ T++ SI+++EDIDC
Sbjct: 248 YLLYGPPGTGKTSLVAAIANYLKFDIYDLQLASVREDADLRRLLLGTTNSSILLVEDIDC 307
Query: 297 SLDL 300
++DL
Sbjct: 308 AVDL 311
Score = 299 (110.3 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 63/137 (45%), Positives = 89/137 (64%)
Query: 326 KEERETN-NSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
K + +T +S +TLSGLL IDGLWS+CG ER+++FTT + E+LDPAL+R GRMD HI +
Sbjct: 318 KTQDDTKGSSMLTLSGLLTCIDGLWSSCGDERIVIFTTTHKERLDPALLRPGRMDMHIHM 377
Query: 385 SHCSYEAFKVLAKNYLNI---ESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFS 441
HC ++ FK LA NYL + + H+L+ +I L+ +TPA VAE LM P DV +
Sbjct: 378 GHCCFDVFKTLASNYLGLSHDDPHHLYPEIERLIKGEVLTPAQVAEELMKNEDP-DV--A 434
Query: 442 LRSLNQALELAKEEARR 458
L L + L+ + E +
Sbjct: 435 LEGLVKVLKRKRLELEK 451
>TAIR|locus:2175976 [details] [associations]
symbol:AT5G17750 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00522104 RefSeq:NP_197277.1 UniGene:At.54890
ProteinModelPortal:F4KID5 SMR:F4KID5 EnsemblPlants:AT5G17750.1
GeneID:831643 KEGG:ath:AT5G17750 OMA:YIAYVER Uniprot:F4KID5
Length = 392
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 150/354 (42%), Positives = 221/354 (62%)
Query: 75 YLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWWS--SGKHISKSQVF 132
YLSSK S A +L+ N+ +++ L + E V+D ++GI+L W G++ K+ V
Sbjct: 57 YLSSKISPDASKLRMTRDPNN-KNVNLHLSQGEVVSDVYKGIELKWRYLEGRN-KKTTVV 114
Query: 133 SFYPATDEK----RYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRKL--YTNNGS 186
T+E + ++L+F K+H+DL++ Y+ V ++ + IK R+ K+ Y++
Sbjct: 115 G--EETEEAIVNWQCFELSFDKKHKDLVVKSYIAYVERKAKVIKEERRIIKMHSYSSYTL 172
Query: 187 NWVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTG 246
W V FEHP+TF T+AM P K +++DL F K +D+Y R+G+AWKR Y LYGPPGTG
Sbjct: 173 RWQSVKFEHPSTFHTMAMTPKLKSSVMEDLDRFIKRKDYYKRVGKAWKRSYFLYGPPGTG 232
Query: 247 KSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRX 306
KS+++AAMAN L +D+YDL+L V+ + +LR LL+ T++ SI+++EDIDCS+DL + +
Sbjct: 233 KSSLVAAMANYLKFDIYDLQLANVQGDAQLRSLLLATNNSSILLVEDIDCSVDLPTRLQP 292
Query: 307 XXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIE 366
LG + T +TLSGLLN IDGLWS+CG ER+++FTTN E
Sbjct: 293 ATTT-------------LGAPKGST---PLTLSGLLNCIDGLWSSCGDERIVIFTTNNKE 336
Query: 367 KLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNI-----ESHNLFDKIGELL 415
LDPAL+R G MD HI L HCS+E FK+LA NYL + + H L+ I L+
Sbjct: 337 VLDPALLRPGCMDMHIYLGHCSFEGFKILASNYLGMPHDSDDPHRLYPDIKRLI 390
>TAIR|locus:2039981 [details] [associations]
symbol:AT2G46620 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009693 "ethylene biosynthetic process" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 IPI:IPI00525526
RefSeq:NP_182185.2 UniGene:At.19721 ProteinModelPortal:F4IJ77
SMR:F4IJ77 EnsemblPlants:AT2G46620.1 GeneID:819274
KEGG:ath:AT2G46620 OMA:CDDLRAL InterPro:IPR025753 Pfam:PF14363
Uniprot:F4IJ77
Length = 491
Score = 420 (152.9 bits), Expect = 3.3e-61, Sum P(2) = 3.3e-61
Identities = 100/302 (33%), Positives = 157/302 (51%)
Query: 6 LFTSLGSIIASGMFLWAMFQQYFPYELRHNIEKYSQRLVSFFYPYVQITFNEFTGDRFMR 65
L+ S ++ S L+ + F L + ++ + ++++ +F+ Y EF D
Sbjct: 4 LWDSFLLLLVSTFALFLVRILLFKTGLIYMVKLWRRKIIDWFHVYQFYKVPEFN-DNVQE 62
Query: 66 SEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWWSSGKH 125
+ Y + YL+S SS + S ++L +D ++ V DEF G ++ W +G+
Sbjct: 63 NHLYQKVYMYLNSLSSIENSDFTNLFTGKKSNEIILRLDRNQVVGDEFLGARVCWINGED 122
Query: 126 ISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRKLYTNNG 185
D R + L K + ILG YL + E++ RN KL+ N G
Sbjct: 123 ------------EDGARNFVLKIRKADKRRILGSYLQHIHTVSDELEQRNTELKLFINVG 170
Query: 186 ------------SNWVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAW 233
W + F+HP TF +AME K ++ DL +F K + +Y R+GR W
Sbjct: 171 IDDHLNKKKKKNGRWRSIPFDHPCTFDNIAMETDLKNKVKSDLESFLKGKQYYNRLGRVW 230
Query: 234 KRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVIED 293
KR YLLYGP GTGKS+ +AAMAN L YD+YD++L+ V D+++L+ LL++T KS+IVIED
Sbjct: 231 KRSYLLYGPSGTGKSSFVAAMANFLDYDVYDIDLSKVVDDSDLKMLLLQTRGKSVIVIED 290
Query: 294 ID 295
+D
Sbjct: 291 LD 292
Score = 224 (83.9 bits), Expect = 3.3e-61, Sum P(2) = 3.3e-61
Identities = 43/99 (43%), Positives = 64/99 (64%)
Query: 331 TNNSQVTLSGLLNFIDGLWSAC-GGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSY 389
T ++ V LSG+LNF D + S+C ER++VFT E++DPA++R GR+D HI C +
Sbjct: 297 TKSTAVNLSGILNFTDSILSSCTADERIMVFTMTGKEQIDPAMLRPGRVDVHIHFPLCDF 356
Query: 390 EAFKVLAKNYLNIESHNLFDKI-GELLGEAKMTPADVAE 427
AFK LA NYL ++ H LF ++ G A ++PA++ E
Sbjct: 357 TAFKTLANNYLGVKEHKLFSQVEGIFQNGASLSPAEIGE 395
>TAIR|locus:2115954 [details] [associations]
symbol:AT4G05380 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AL161503 HOGENOM:HOG000237995 IPI:IPI00526918
PIR:F85067 RefSeq:NP_192447.1 UniGene:At.54165
ProteinModelPortal:Q9M0V7 SMR:Q9M0V7 STRING:Q9M0V7 PaxDb:Q9M0V7
PRIDE:Q9M0V7 EnsemblPlants:AT4G05380.1 GeneID:825886
KEGG:ath:AT4G05380 TAIR:At4g05380 InParanoid:Q9M0V7 OMA:DETEYGE
PhylomeDB:Q9M0V7 ProtClustDB:CLSN2916038 Genevestigator:Q9M0V7
Uniprot:Q9M0V7
Length = 248
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 122/251 (48%), Positives = 167/251 (66%)
Query: 204 MEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLY 263
MEP K +I DL AFS +DF+ +GRAWKRGYLLYGPPGTGKS+++AA+AN + Y +Y
Sbjct: 1 MEPELKNTLIRDLDAFSNGKDFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIANFMNYSIY 60
Query: 264 DLELTAVKDNTELRKLLIETSSKSIIVIEDIDCS-LDLTGQRRXXXXXXXXXXXXXXPRQ 322
DL++ +VKD+ LR++L T ++SI++IED+DCS D T ++
Sbjct: 61 DLQIQSVKDDAMLRQILTSTENRSILLIEDLDCSGADTTCRKENKDETEYGE-------- 112
Query: 323 KLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHI 382
+ +++ + +VTLSGLLNF+DGLWS+C ER+I+FTTN+ EKLDPAL+R GRMD HI
Sbjct: 113 --NQNKKKKKDPKVTLSGLLNFVDGLWSSCVEERIIIFTTNHKEKLDPALLRPGRMDVHI 170
Query: 383 ELSHCSYEAFKVLAKNYLNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSL 442
+ +C+ FK LA YL IE H LFD I ++ E K TPA++ E LM P DV +L
Sbjct: 171 LMDYCTPIVFKKLAALYLEIEEHELFDPIEKMFLEVKATPAEITEKLMVSKDP-DV--TL 227
Query: 443 RSLNQALELAK 453
+ L + LE K
Sbjct: 228 KGLVEFLESKK 238
>TAIR|locus:2086591 [details] [associations]
symbol:AT3G29800 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:CP002686
EMBL:AP000736 HOGENOM:HOG000237995 IPI:IPI00525495
RefSeq:NP_189629.1 UniGene:At.53586 ProteinModelPortal:Q9LJ50
SMR:Q9LJ50 IntAct:Q9LJ50 PRIDE:Q9LJ50 EnsemblPlants:AT3G29800.1
GeneID:822695 KEGG:ath:AT3G29800 TAIR:At3g29800 InParanoid:Q9LJ50
PhylomeDB:Q9LJ50 ArrayExpress:Q9LJ50 Genevestigator:Q9LJ50
Uniprot:Q9LJ50
Length = 440
Score = 334 (122.6 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 71/219 (32%), Positives = 131/219 (59%)
Query: 88 KADIIKNSSQSLV---LSMD--DHEEVADEFQGIKLWWSSGKHISKSQVFSFYPATDEKR 142
+ ++I ++Q+ + +++D + E D +QG KL W + K+ + + P K+
Sbjct: 53 RINVIHGATQAYLFDKINLDFVEEREFDDIYQGAKLKWRI--FVDKNNIGNI-P----KQ 105
Query: 143 YYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRKLYTNNG--SNWVHVVFEHPATFQ 200
++L F ++HRDL+ Y+ V + +EIK + R+ +++T + W + +H ++F+
Sbjct: 106 CFELRFDEKHRDLVFDSYIPFVESKAKEIKSKKRILEMHTYSHCCDTWETKILDHHSSFE 165
Query: 201 TLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGY 260
T+ M+ K+ +IDD+ F EDFY R+GR W R YLL+G PG GK++++AA+A L +
Sbjct: 166 TIVMKEDLKRRLIDDIDLFISKEDFYKRVGRHWMRYYLLHGLPGAGKTSLVAAIAKYLNF 225
Query: 261 DLYDLELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLD 299
D+Y++ VK + + R+L+ SI+++EDID SL+
Sbjct: 226 DVYNIT-QGVKTDFDTRRLIRRVEDSSILLVEDIDTSLE 263
Score = 174 (66.3 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 48/126 (38%), Positives = 68/126 (53%)
Query: 327 EERETN--NSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
E+ +T+ S+V LS LL+ + WS G R+++FTTN E+ D L+ RM+ I +
Sbjct: 256 EDIDTSLEGSKVALSQLLSSLTWPWSN-GKARVVIFTTNNKERFDQTLLC--RMEMKIYM 312
Query: 385 SHCSYEAFKVLAKNYLNIES-----HNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVE 439
HC +E FK LA NYL I H L+ I L+ +TP V E LM DV+
Sbjct: 313 GHCCFEDFKTLASNYLGISHDNDAPHRLYPDIKRLIDGQAVTPGQVVEELMKSQ---DVD 369
Query: 440 FSLRSL 445
+L+SL
Sbjct: 370 VALQSL 375
>TAIR|locus:2095467 [details] [associations]
symbol:AT3G28560 "AT3G28560" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] EMBL:CP002686
GenomeReviews:BA000014_GR eggNOG:COG0465 EMBL:AP000420
InterPro:IPR025753 Pfam:PF14363 EMBL:AY924779 EMBL:DQ132691
IPI:IPI00534445 RefSeq:NP_189497.1 UniGene:At.53542
UniGene:At.73270 EnsemblPlants:AT3G28560.1 GeneID:822486
KEGG:ath:AT3G28560 TAIR:At3g28560 PhylomeDB:Q9LJJ9
Genevestigator:Q9LJJ9 Uniprot:Q9LJJ9
Length = 257
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 96/221 (43%), Positives = 136/221 (61%)
Query: 1 MESKDLFTSLGSIIASGMFLWAMFQQYFPYELRHNIEKYSQRLVSFFYPYVQITFNEFTG 60
+E+ ++ GS + S MF WAM+ Q +IEKY +L+ + V I FNE++G
Sbjct: 2 LETGSIWGFTGSTMTSLMFFWAMYNQV-------HIEKYIYKLMGWVSNSVHIKFNEYSG 54
Query: 61 DRFMRSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWW 120
+ +SEA+ I NYLS+KS+ RLKA+ K S +SLVLS+DDHE V D FQG+K+ W
Sbjct: 55 EGLEKSEAFDTIHNYLSTKSTALGNRLKANESKKS-KSLVLSLDDHETVEDVFQGVKVKW 113
Query: 121 SSGKHISKSQVFSFYP-ATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRK 179
SS +++Q + E+RY L+FH RHR++I YL VL+EG+EI ++ R RK
Sbjct: 114 SSSVRENQNQSSTNRDKGFAERRYLTLSFHSRHREMITTTYLDHVLREGKEIGLKKRERK 173
Query: 180 LYTNN----------GSNWVHVVFEHPATFQTLAMEPAEKK 210
LYTNN G+NW +V F+HPAT +T AM+P + K
Sbjct: 174 LYTNNSSHEWISWRLGTNWSNVSFDHPATLETFAMDPEKNK 214
>DICTYBASE|DDB_G0291910 [details] [associations]
symbol:bcs1lB "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0291910
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005743 GO:GO:0016887 EMBL:AAFI02000186 eggNOG:COG0465
GO:GO:0051131 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 RefSeq:XP_629907.1 STRING:Q54DY9
EnsemblProtists:DDB0266726 GeneID:8628408 KEGG:ddi:DDB_G0291910
KO:K08900 OMA:RDKSYQW Uniprot:Q54DY9
Length = 458
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 97/305 (31%), Positives = 158/305 (51%)
Query: 163 SVLKEGREIKVRNRMRK--LYTNNGSNWVHVVFEHPAT---FQTLAMEPAEKKEIIDDLI 217
++++E +E+ + K +YT+ G++W F HP ++ ++ + + II D+
Sbjct: 167 NLIEEAKEMALEKEEGKTLIYTSMGTDWRR--FGHPRRKRPISSVILDKGKSELIIQDVK 224
Query: 218 AFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELT--AVKDNTE 275
F + D+Y G ++RGYLLYGPPGTGKS+ I A+A L + L L +V D T
Sbjct: 225 KFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSD-TS 283
Query: 276 LRKLLIETSSKSIIVIEDIDCSL-----DLTGQRRXXXXXXXXXXXXXXPRQKLGKEERE 330
L +LL +SII++EDID ++ DL+ + + G
Sbjct: 284 LNQLLATAPQRSIILLEDIDSAIQTGNHDLSAKSNSANAPSISSGGLQY-QGYYGNPSVS 342
Query: 331 TNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCS-Y 389
+ S +T SGLLN +DG+ ++ G R++ TTN++EKLD LIR GR+D IE+ CS Y
Sbjct: 343 SGGSALTFSGLLNALDGVAASEG--RILFMTTNHLEKLDKVLIRPGRVDLQIEIGLCSSY 400
Query: 390 EAFKVLAKNYLNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLNQAL 449
+ ++ K Y +L + E L K +PA + + M T+ + S+ ++N
Sbjct: 401 QMEQMFLKFYPT--DFDLAKQFVEKLENYKFSPAQLQAYFM--TYSNN---SIEAINNLN 453
Query: 450 ELAKE 454
EL K+
Sbjct: 454 ELIKK 458
>UNIPROTKB|G4MXF6 [details] [associations]
symbol:MGG_15496 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
RefSeq:XP_003713293.1 EnsemblFungi:MGG_15496T0 GeneID:12986165
KEGG:mgr:MGG_15496 Uniprot:G4MXF6
Length = 676
Score = 326 (119.8 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 87/293 (29%), Positives = 153/293 (52%)
Query: 166 KEGREIKVRNRMRKLYTNNGSNWVHVVFEHPATFQTLAMEPAEKKEIIDDLIAF--SKSE 223
+ R + VR +K Y NG++W + QT+ + KK++I D+I + +
Sbjct: 223 QRARYVTVRT-CKKSY--NGAHWDSTILRPTRPIQTVHFDEQVKKDLIADIINYLDPHTR 279
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIET 283
DFY + G ++RGYLL+GPPGTGK+++ A+A++ +LY L + ++ ++ EL + E
Sbjct: 280 DFYHQRGIPYRRGYLLHGPPGTGKTSLSLALASMFKLELYLLHVPSLANDGELESMFDEL 339
Query: 284 SSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLN 343
+ II++EDID ++ + RR + EE + + TLSGLLN
Sbjct: 340 PPRCIILLEDID-AVGIP--RRNELAARMTGLDDKDDDEDDEDEENGSGRGRSTLSGLLN 396
Query: 344 FIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIE 403
+DG+ S G R++ T+N +KLDPAL+R GR+D+ I L + + E+ +++ +L +
Sbjct: 397 VLDGVASQEG--RIVFMTSNLADKLDPALVRPGRIDRKIFLGNINQESARLM---FLRMY 451
Query: 404 SHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLNQALELAKEEA 456
+ + + +L A+M ++++ P SL +EL K A
Sbjct: 452 AESDDSQFADLGPAAEMEMSELSGQTTPAIISPGPPTSLDEKVNTVELEKVAA 504
>ZFIN|ZDB-GENE-040426-938 [details] [associations]
symbol:bcs1l "BCS1-like (yeast)" species:7955
"Danio rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-040426-938
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465
GO:GO:0017111 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 EMBL:AY394959 EMBL:BC045990
IPI:IPI00495335 RefSeq:NP_957476.2 UniGene:Dr.80335
ProteinModelPortal:Q7ZV60 STRING:Q7ZV60 PRIDE:Q7ZV60
Ensembl:ENSDART00000022246 GeneID:394157 KEGG:dre:394157
InParanoid:Q7ZV60 NextBio:20815107 ArrayExpress:Q7ZV60 Bgee:Q7ZV60
Uniprot:Q7ZV60
Length = 420
Score = 207 (77.9 bits), Expect = 3.9e-26, Sum P(2) = 3.9e-26
Identities = 59/239 (24%), Positives = 114/239 (47%)
Query: 65 RSEAYSAIENYLSSKSS-TQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWWSSG 123
+ ++Y + ++++ + TQ ++ +++ S + D H + W
Sbjct: 56 KDKSYHWLLSWITKHAKHTQHLSVETSYMQHESGKVHTQFDFHPSPGNHIIWYGRKWIRV 115
Query: 124 KHISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRK--LY 181
+ + + Q+ + T + +TF RD ++L+E RE+ ++ + +Y
Sbjct: 116 ERVREKQMMDLHTGTP---WESVTFTALGRDR---QTFFNILQEARELALKQEEGRTVMY 169
Query: 182 TNNGSNWVHVVF-EHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLY 240
T G+ W F ++ +E + I+DD+ F + +Y G ++RGYLLY
Sbjct: 170 TAMGAEWRPFGFPRRRRPLSSVVLESGVAERIVDDVKEFIGNPKWYTDRGIPYRRGYLLY 229
Query: 241 GPPGTGKSTMIAAMANLLGYDLYDLELT--AVKDNTELRKLLIETSSKSIIVIEDIDCS 297
GPPG GKS+ I A+A LGY + + L+ ++ D+ L LL +SII++ED+D +
Sbjct: 230 GPPGCGKSSFITALAGELGYSICLMSLSDRSLSDD-RLNHLLSVAPQQSIILLEDVDAA 287
Score = 157 (60.3 bits), Expect = 3.9e-26, Sum P(2) = 3.9e-26
Identities = 40/105 (38%), Positives = 57/105 (54%)
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKV 394
++T SGLLN +DG+ A R++ TTN+IE+LDPAL+R GR+D + HCS+
Sbjct: 307 RLTFSGLLNALDGV--ASSEARIVFMTTNFIERLDPALVRPGRVDLKQYVGHCSHWQLTQ 364
Query: 395 LAKNYLNIESHNLFDKIGE--LLGEAKMTPADVAEHLMP-KTFPA 436
+ + + ES D E L ++ A V H M KT PA
Sbjct: 365 MFRRFYPQESAAEADHFSEQALAAHTDLSAAQVQGHFMLYKTDPA 409
>ASPGD|ASPL0000063397 [details] [associations]
symbol:AN7549 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AACD01000129 EMBL:BN001304
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_680818.1 ProteinModelPortal:Q5AVY1
EnsemblFungi:CADANIAT00000655 GeneID:2869406 KEGG:ani:AN7549.2
HOGENOM:HOG000165936 OMA:RPLAFIR OrthoDB:EOG4BK8C9 Uniprot:Q5AVY1
Length = 650
Score = 315 (115.9 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 78/223 (34%), Positives = 118/223 (52%)
Query: 186 SNWVHVVFEHPATFQTLAMEPAEKKEIIDDLIAF--SKSEDFYARIGRAWKRGYLLYGPP 243
+ W + P T+ ++ A+K IDD+ + ++ +Y G ++RGYLL+GPP
Sbjct: 260 TEWSRCMARAPRALSTVVLDKAQKDAFIDDIKDYLHPRTRRWYNNRGIPYRRGYLLHGPP 319
Query: 244 GTGKSTMIAAMANLLGYDLYDLELTAVK-DNTELRKLLIETSSKSIIVIEDIDCSLDLTG 302
GTGK+++ A A LLG +LY L L++ D EL L + ++ I+++ED+DC+ ++
Sbjct: 320 GTGKTSLCFAAAGLLGLELYLLNLSSKSLDEDELMALFTDLPTRCIVLLEDVDCA-GMSQ 378
Query: 303 QRRXXXXXXXXXXXXXXPR---QKLGKEERETNNSQ-------VTLSGLLNFIDGLWSAC 352
+R P Q G T V+LSGLLN IDG+ +AC
Sbjct: 379 KRTPGSSSNDDNGNSASPELQEQGEGNSSGTTTGGTGVFEKQGVSLSGLLNVIDGV-AAC 437
Query: 353 GGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVL 395
G R++V TTN+ EKLDPAL+R GR+D I H + K L
Sbjct: 438 EG-RILVMTTNHPEKLDPALVRPGRIDLSIAFGHSTTSDIKEL 479
>WB|WBGene00010042 [details] [associations]
symbol:bcs-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 eggNOG:COG0465 GO:GO:0017111 EMBL:Z49967
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
PIR:T22632 RefSeq:NP_001022191.1 ProteinModelPortal:Q20755
SMR:Q20755 STRING:Q20755 PaxDb:Q20755 PRIDE:Q20755
EnsemblMetazoa:F54C9.6a.1 EnsemblMetazoa:F54C9.6a.2
EnsemblMetazoa:F54C9.6a.3 GeneID:174372 KEGG:cel:CELE_F54C9.6
UCSC:F54C9.6a.2 CTD:174372 WormBase:F54C9.6a InParanoid:Q20755
NextBio:883750 ArrayExpress:Q20755 Uniprot:Q20755
Length = 442
Score = 182 (69.1 bits), Expect = 5.9e-25, Sum P(3) = 5.9e-25
Identities = 40/120 (33%), Positives = 66/120 (55%)
Query: 180 LYTNNGSNWVHV-VFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYL 238
+Y G W+ V +++ ++ +E+++D F S +YA G ++RGYL
Sbjct: 188 IYQAVGPQWIRFGVPRKKRDIESVILDGRICEELVEDFQEFISSATWYADRGVPYRRGYL 247
Query: 239 LYGPPGTGKSTMIAAMANLLGYDLYDLELTA-VKDNTELRKLLIETSSKSIIVIEDIDCS 297
YGPPGTGKS+ I+A+A+ GY + L L+ D+ L LL S++++EDID +
Sbjct: 248 FYGPPGTGKSSFISALASHFGYSVCLLSLSERTLDDDRLNHLLNTAPPNSVVILEDIDAA 307
Score = 161 (61.7 bits), Expect = 5.9e-25, Sum P(3) = 5.9e-25
Identities = 43/106 (40%), Positives = 61/106 (57%)
Query: 334 SQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAF- 392
S+VT SGLLN +DG+ AC ERL TTNY+E+LDPALIR GR+D+ + +
Sbjct: 325 SRVTFSGLLNALDGV--ACAEERLTFMTTNYVERLDPALIRPGRVDRKQYFGNATDGMLS 382
Query: 393 KVLAKNYLNIESHNLFDKIGELLGEAK--MTPADVAEH-LMPKTFP 435
K+ ++ Y L D+ + + E K ++PA + H LM K P
Sbjct: 383 KMFSRFYRQPSDSVLADEFVKRVSEHKTELSPAMIQGHFLMYKQDP 428
Score = 52 (23.4 bits), Expect = 5.9e-25, Sum P(3) = 5.9e-25
Identities = 17/62 (27%), Positives = 35/62 (56%)
Query: 44 VSFFYPYVQITFNEFTGDRFM-----RSE--AYSAIENYLSSKSSTQAKRLKADIIKNSS 96
+SF QI+ N + RFM +E AY + ++++++S+TQ + L A+ + + +
Sbjct: 47 MSFLRRTAQIS-NTYFRRRFMINLQINNEDAAYPWLLDFINNRSATQTRNLSANTVVHQA 105
Query: 97 QS 98
+S
Sbjct: 106 ES 107
>DICTYBASE|DDB_G0289135 [details] [associations]
symbol:bcs1lA "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0289135 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0005743 GenomeReviews:CM000154_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0051131 EMBL:AAFI02000130 RefSeq:XP_636375.1
EnsemblProtists:DDB0266725 GeneID:8626976 KEGG:ddi:DDB_G0289135
OMA:FITNESW InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 Uniprot:Q54HY8
Length = 421
Score = 191 (72.3 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 47/141 (33%), Positives = 82/141 (58%)
Query: 164 VLKEGREIKVRNRMRK--LYTNNGS-NWVHVVFEHPATFQTLA---MEPAEKKEIIDDLI 217
+L+E + + + K +Y N G+ NW F +P + ++L+ + K ++I+D+
Sbjct: 147 LLQEAMTLSLNRDIGKTVIYINGGNGNWER--FGNPRSIRSLSSVILADDLKSKLIEDIK 204
Query: 218 AFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVK-DNTEL 276
+F +E +Y G ++RGYLLYG PG GKS++I A+A L D+ + L++ D+ ++
Sbjct: 205 SFITNESWYRNRGIPYRRGYLLYGEPGNGKSSLINAIAGELNLDICIVSLSSKDIDDKQI 264
Query: 277 RKLLIETSSKSIIVIEDIDCS 297
LL KSI++IEDID +
Sbjct: 265 NHLLNNAPPKSILLIEDIDAA 285
Score = 142 (55.0 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 36/100 (36%), Positives = 60/100 (60%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
NN+ +T SGLLN +DG+ S G R++ TTN IE LD ALIR+GR+D I++S+ +
Sbjct: 302 NNNSLTYSGLLNALDGVASQEG--RILFMTTNKIELLDSALIREGRIDLKIKVSNATKSQ 359
Query: 392 FKVLAKNYLNIESHN-LFDKIGELLGEAKMTPADVAEHLM 430
L ++ N+ + N L + E L + +++ + + L+
Sbjct: 360 AAQLFTHFYNLPTDNQLAIRFSENLHDHQLSMSQIQGFLL 399
>FB|FBgn0032195 [details] [associations]
symbol:CG4908 species:7227 "Drosophila melanogaster"
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW GeneTree:ENSGT00390000005415
EMBL:AY089691 RefSeq:NP_609358.1 RefSeq:NP_723532.1 UniGene:Dm.383
SMR:Q9VL22 STRING:Q9VL22 EnsemblMetazoa:FBtr0079949
EnsemblMetazoa:FBtr0079950 GeneID:34360 KEGG:dme:Dmel_CG4908
UCSC:CG4908-RA FlyBase:FBgn0032195 InParanoid:Q9VL22
OrthoDB:EOG40CFZ9 GenomeRNAi:34360 NextBio:788111 Uniprot:Q9VL22
Length = 431
Score = 190 (71.9 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 65/242 (26%), Positives = 114/242 (47%)
Query: 65 RSEAYSAIENYLSSKSS--TQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWWSS 122
R ++Y + +++ + + TQ ++ + ++N + ++ S D + K W
Sbjct: 56 RDKSYQWLLKWITIRGARKTQHLSVETNFVQNDNGTIKTSYDFIPSIGKHLFQYKGNWIQ 115
Query: 123 GKHISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRK--L 180
+ + Q + + LT ++ G Y +L+E R++ + K L
Sbjct: 116 VERTREQQTLDLHMGVPWETV-TLTAFGNNK----GIYF-DILEEARQLALEATEGKTVL 169
Query: 181 YTNNGSNWVHVVFEHPATFQ---TLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGY 237
YT G+ W F HP + ++ ++ + II D F KS +Y + G ++RGY
Sbjct: 170 YTAMGAEWRP--FGHPRRRRPTGSVVLDRGTSQRIIADCQDFIKSSLWYTQRGIPYRRGY 227
Query: 238 LLYGPPGTGKSTMIAAMANLLGYDLYDLELT--AVKDNTELRKLLIETSSKSIIVIEDID 295
LLYGPPG GKS+ I A+A L Y + L L+ + D+ L LL +SII++EDID
Sbjct: 228 LLYGPPGCGKSSFITALAGELEYSVCLLNLSERGLTDD-RLNHLLNVAPEQSIILLEDID 286
Query: 296 CS 297
+
Sbjct: 287 AA 288
Score = 142 (55.0 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 334 SQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFK 393
+++T SGLLN +DG+ S R++ TTNYI++LDPAL+R GR+D + +C+ +
Sbjct: 306 NRITFSGLLNCLDGVGST--EARIVFMTTNYIDRLDPALVRPGRIDLKEYIGYCTQYQLE 363
Query: 394 VLAKNYLNIESHNLFDKIGELLGE--AKMTPADVAEHLM 430
+ KN+ ++ G+ + +PA + M
Sbjct: 364 EMFKNFFASSDTTKAEEFGKRVNSFGRSASPAQIQGFFM 402
>UNIPROTKB|Q5E9H5 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9913
"Bos taurus" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
eggNOG:COG0465 GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW EMBL:BT020945 EMBL:BC103135 IPI:IPI00713658
RefSeq:NP_001015671.1 UniGene:Bt.5278 ProteinModelPortal:Q5E9H5
STRING:Q5E9H5 Ensembl:ENSBTAT00000004967 GeneID:539713
KEGG:bta:539713 CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 InParanoid:Q5E9H5
OrthoDB:EOG4TTGJ0 NextBio:20878172 GO:GO:0034551 GO:GO:0033617
Uniprot:Q5E9H5
Length = 419
Score = 184 (69.8 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 64/242 (26%), Positives = 114/242 (47%)
Query: 65 RSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWWSSGK 124
R +Y+ + ++L+ + ST+ + L + +S +S E V G W GK
Sbjct: 56 RDRSYAWLLSWLT-RHSTRTQHLSVETTYLQHESGRISTK-FEFVPSP--GNHFIWYQGK 111
Query: 125 --HISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRK--L 180
+ +S+ + +TF D + ++L+E RE+ ++ K +
Sbjct: 112 WIRVERSREMQMIDLQTGTPWESVTFTALGTDRKV---FFNILEEARELALQQEEGKTVM 168
Query: 181 YTNNGSNWVHVVFEHPAT---FQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGY 237
YT GS W F +P ++ +E + I+ D+ F + +Y G ++RGY
Sbjct: 169 YTAVGSEWRP--FGYPRRRRPLNSVVLEQGVTERIVRDIREFIDNPKWYIDRGIPYRRGY 226
Query: 238 LLYGPPGTGKSTMIAAMANLLGYDLYDLELT--AVKDNTELRKLLIETSSKSIIVIEDID 295
LLYGPPG GKS+ I A+A L + + L LT ++ D+ L LL +S++++ED+D
Sbjct: 227 LLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSDD-RLNHLLSVAPQQSLVLLEDVD 285
Query: 296 CS 297
+
Sbjct: 286 AA 287
Score = 143 (55.4 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 38/116 (32%), Positives = 65/116 (56%)
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKV 394
++T SGLLN +DG+ S R++ TTN+I++LDPALIR GR+D + HCS
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDMKEYVGHCSRWQLTQ 363
Query: 395 LAKNYLNIESHNLFDKIGELLGEA--KMTPADVAEHLMP-KTFPADVEFSLRSLNQ 447
+ + + ++ +L + + + +A +++PA V + M K PA + SL +
Sbjct: 364 MFQRFYPGQATSLAENFADRVLQATTQISPAQVQGYFMLYKNDPAGAIQNAESLRR 419
>POMBASE|SPAC644.07 [details] [associations]
symbol:SPAC644.07 "mitochondrial Rieske ISP assembly
ATPase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
[GO:0043623 "cellular protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC644.07 GO:GO:0016021 GO:GO:0005524 EMBL:CU329670
GO:GO:0005743 GO:GO:0016226 eggNOG:COG0465 GO:GO:0043623
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
KO:K08900 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:D89136 PIR:T42406
RefSeq:NP_593875.1 ProteinModelPortal:Q9P6Q3 STRING:Q9P6Q3
EnsemblFungi:SPAC644.07.1 GeneID:2543663 KEGG:spo:SPAC644.07
OrthoDB:EOG4XWK6J NextBio:20804669 GO:GO:0042623 Uniprot:Q9P6Q3
Length = 449
Score = 183 (69.5 bits), Expect = 6.4e-22, Sum P(2) = 6.4e-22
Identities = 47/131 (35%), Positives = 74/131 (56%)
Query: 180 LYTNNGSNWVHVVFEHPATFQTLA---MEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRG 236
+YT + W F HP + + L+ +E KK I DD+ F ++ +Y G ++RG
Sbjct: 187 IYTAWATEWKP--FGHPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRG 244
Query: 237 YLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTE--LRKLLIETSSKSIIVIEDI 294
YLLYGPPG+GK++ + A+A L YD+ L L A K T+ L LL K+++++ED+
Sbjct: 245 YLLYGPPGSGKTSFLYALAGELDYDICVLNL-AEKGLTDDRLNHLLSNVPPKAVVLLEDV 303
Query: 295 DCSLDLTGQRR 305
D + G+ R
Sbjct: 304 DSAFQ--GRER 312
Score = 145 (56.1 bits), Expect = 6.4e-22, Sum P(2) = 6.4e-22
Identities = 37/106 (34%), Positives = 60/106 (56%)
Query: 333 NSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAF 392
++ VT SGLLN +DG+ S+ ER+I TTN+ EKLDPAL+R GR+D L + + E
Sbjct: 319 HANVTFSGLLNALDGVTSS--DERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPEQV 376
Query: 393 KVLAKNYLNIESHNLFDKIGELLGEAKMTPADVAE-HLMPKTFPAD 437
+ + + S + D + +++ + A + +M K+ PAD
Sbjct: 377 REMFTRFYG-HSPEMADDLSDIVCPKNTSMASLQGLFVMNKSSPAD 421
>UNIPROTKB|F1P1Q6 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
GeneTree:ENSGT00390000005415 EMBL:AADN02016784 IPI:IPI00819859
PRIDE:F1P1Q6 Ensembl:ENSGALT00000038219 Uniprot:F1P1Q6
Length = 419
Score = 183 (69.5 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 43/140 (30%), Positives = 78/140 (55%)
Query: 163 SVLKEGREIKVRNRMRK--LYTNNGSNWVHVVF-EHPATFQTLAMEPAEKKEIIDDLIAF 219
++L+E RE+ ++ + + +YT G+ W F ++ +E + +++D+ F
Sbjct: 149 NILQEARELALQQQEGRTIMYTAMGTEWRQFGFPRRRRPLSSVVLEKGVSERLVEDVKEF 208
Query: 220 SKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELT--AVKDNTELR 277
+ +Y G ++RGYLLYGPPG GKS+ I A+A L + + L L+ ++ D+ L
Sbjct: 209 IDNPKWYIERGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLSDRSLSDD-RLN 267
Query: 278 KLLIETSSKSIIVIEDIDCS 297
LL +SII++ED+D +
Sbjct: 268 YLLSVAPQQSIILLEDVDAA 287
Score = 138 (53.6 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 37/114 (32%), Positives = 61/114 (53%)
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKV 394
++T SGLLN +DG+ S R++ TTNY+++LDPAL+R GR+D + HCS
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNYVDRLDPALVRPGRVDLKQYVGHCSRGQLAR 363
Query: 395 LAKNYLNIESHNLFDKIGE-LLGEAK-MTPADVAEHLMP-KTFPADVEFSLRSL 445
+ + + + ++ E L +K ++ A V H M KT P ++ S+
Sbjct: 364 MFQRFYPEQPPAAAERFAEQALAVSKQISAAQVQGHFMLYKTDPGGAIENIHSI 417
>UNIPROTKB|I3LFK0 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 Ensembl:ENSSSCT00000027544
Uniprot:I3LFK0
Length = 419
Score = 183 (69.5 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 61/243 (25%), Positives = 115/243 (47%)
Query: 65 RSEAYSAIENYLSSKSS-TQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWWSSG 123
R +Y+ + ++L+ S+ TQ ++ +++ S + + + F +W+ G
Sbjct: 56 RDRSYAWLLSWLTRHSARTQHLSVETSYLQHESGRISTKFEFVPSPGNHF----IWYQ-G 110
Query: 124 K--HISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRK-- 179
K + +S+ + +TF D + ++L+E RE+ ++ K
Sbjct: 111 KWIRVERSREMQMIDLQTGTPWESVTFTALGTDRKI---FFNILEEARELALQQEEGKTV 167
Query: 180 LYTNNGSNWVHVVFEHPAT---FQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRG 236
+YT GS W F +P ++ +E I+ D+ F + +Y G ++RG
Sbjct: 168 MYTAVGSEWRP--FGYPRRRRPLNSVVLEQGLADRIVRDIREFIDNPKWYTDRGIPYRRG 225
Query: 237 YLLYGPPGTGKSTMIAAMANLLGYDLYDLELT--AVKDNTELRKLLIETSSKSIIVIEDI 294
YLLYGPPG GKS+ I A+A L + + L LT ++ D+ L LL +S++++ED+
Sbjct: 226 YLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSDD-RLNHLLSVAPQQSLVLLEDV 284
Query: 295 DCS 297
D +
Sbjct: 285 DAA 287
Score = 138 (53.6 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 32/98 (32%), Positives = 56/98 (57%)
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKV 394
++T SGLLN +DG+ S R++ TTN++++LDPALIR GR+D + HCS
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGHCSRWQLTQ 363
Query: 395 LAKNYLNIESHNLFDKIGE--LLGEAKMTPADVAEHLM 430
+ + + ++ +L + + L +++PA V + M
Sbjct: 364 MFQRFYPGQAPSLAESFADRALQATTQISPAQVQGYFM 401
>DICTYBASE|DDB_G0286765 [details] [associations]
symbol:DDB_G0286765 "BCS1-like protein" species:44689
"Dictyostelium discoideum" [GO:0034551 "mitochondrial respiratory
chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0286765 GO:GO:0005524 EMBL:AAFI02000089
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 RefSeq:XP_637666.1
ProteinModelPortal:Q54L95 EnsemblProtists:DDB0229898 GeneID:8625806
KEGG:ddi:DDB_G0286765 InParanoid:Q54L95 OMA:SISIMNM Uniprot:Q54L95
Length = 574
Score = 167 (63.8 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 326 KEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELS 385
K N +T SGLLN IDGL S+ G R+++ TTN++E+L PALIR GR+D ++
Sbjct: 350 KNNSAAGNDVLTFSGLLNAIDGLASSDG--RILMMTTNHLERLSPALIRPGRIDLKVKFD 407
Query: 386 HCSYEAFKVLAKNYLNIESHNLFDKIGELLGEAKMTPADV 425
+ S +++ K + + + H L D I L +++ A +
Sbjct: 408 YASNHQIELMFKRFFDQKYHYLIDSINSKLENHQISTAQL 447
Score = 160 (61.4 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 36/137 (26%), Positives = 77/137 (56%)
Query: 163 SVLKEGREIKVR-NRMR-KLYTNNGSN--WVHVVFEHPATFQTLAMEPAEKKEIIDDLIA 218
S+L+ E V N+ + K+Y+ + S+ W + ++ ++ ++ +++++DL
Sbjct: 207 SILETAVEYSVTLNKDKTKIYSLDQSSTFWECIACQNKRLVDSVFLDENISEKVVNDLTN 266
Query: 219 FSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRK 278
F + +Y G ++RGYLLYGPPG+GK++ I +MA G + + ++ + +
Sbjct: 267 FIHGKKWYTDTGVPYRRGYLLYGPPGSGKTSFILSMAGNFGKSISIMNMSKGIHDGNIHS 326
Query: 279 LLIETSSKSIIVIEDID 295
++ + + +I+V+EDID
Sbjct: 327 IIQKCNKDTILVLEDID 343
>MGI|MGI:1914071 [details] [associations]
symbol:Bcs1l "BCS1-like (yeast)" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=ISO]
[GO:0033617 "mitochondrial respiratory chain complex IV assembly"
evidence=ISO] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1914071 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617
EMBL:AK012324 EMBL:AK078925 EMBL:AK079385 EMBL:BC019781
IPI:IPI00112986 RefSeq:NP_080060.1 UniGene:Mm.358700
ProteinModelPortal:Q9CZP5 SMR:Q9CZP5 STRING:Q9CZP5
PhosphoSite:Q9CZP5 PaxDb:Q9CZP5 PRIDE:Q9CZP5 DNASU:66821
Ensembl:ENSMUST00000027358 Ensembl:ENSMUST00000113732
Ensembl:ENSMUST00000113733 GeneID:66821 KEGG:mmu:66821
UCSC:uc007bmq.1 InParanoid:Q9CZP5 NextBio:322735 Bgee:Q9CZP5
CleanEx:MM_BCS1L Genevestigator:Q9CZP5
GermOnline:ENSMUSG00000026172 Uniprot:Q9CZP5
Length = 418
Score = 172 (65.6 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 44/142 (30%), Positives = 76/142 (53%)
Query: 163 SVLKEGREIKVRNRMRK--LYTNNGSNWVHVVFEHPAT---FQTLAMEPAEKKEIIDDLI 217
++L+E R + ++ K +YT GS W F +P ++ ++ I+ D+
Sbjct: 149 NILEEARALALQQEEGKTVMYTAVGSEWR--TFGYPRRRRPLDSVVLQQGLADRIVKDIR 206
Query: 218 AFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELT--AVKDNTE 275
F + +Y G ++RGYLLYGPPG GKS+ I A+A L + + L LT ++ D+
Sbjct: 207 EFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDD-R 265
Query: 276 LRKLLIETSSKSIIVIEDIDCS 297
L LL +S++++ED+D +
Sbjct: 266 LNHLLSVAPQQSLVLLEDVDAA 287
Score = 149 (57.5 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 38/114 (33%), Positives = 64/114 (56%)
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKV 394
++T SGLLN +DG+ S R++ TTNYI++LDPALIR GR+D + +CS+
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNYIDRLDPALIRPGRVDLKEYVGYCSHWQLTQ 363
Query: 395 LAKNYLNIESHNLFDKIGE--LLGEAKMTPADVAEHLMP-KTFPADVEFSLRSL 445
+ + + ++ +L + E L ++++PA V + M K P ++ SL
Sbjct: 364 MFQRFYPGQAPSLAENFAEHVLKATSEISPAQVQGYFMLYKNDPMGAVHNIESL 417
>UNIPROTKB|E2RE50 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IEA] [GO:0033617 "mitochondrial
respiratory chain complex IV assembly" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 GO:GO:0034551 GO:GO:0033617
EMBL:AAEX03018156 RefSeq:XP_536070.1 Ensembl:ENSCAFT00000023625
GeneID:478911 KEGG:cfa:478911 NextBio:20854180 Uniprot:E2RE50
Length = 419
Score = 181 (68.8 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 62/243 (25%), Positives = 115/243 (47%)
Query: 65 RSEAYSAIENYLSSKSS-TQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWWSSG 123
R +Y+ + ++L+ S+ TQ ++ +++ S + + + F +W+ G
Sbjct: 56 RDRSYAWLLSWLTRHSTRTQHLSVETSYLQHESGRISTKFEFVPSPGNHF----IWYQ-G 110
Query: 124 K--HISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRK-- 179
K + +S+ + +TF D + ++L+E RE+ ++ K
Sbjct: 111 KWIRVERSREMQMIDLQTGTPWESVTFTALGTDRKV---FFNILEEARELALQQEEGKTV 167
Query: 180 LYTNNGSNWVHVVF---EHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRG 236
+YT GS W + P T L A++ I+ D+ F + +Y G ++RG
Sbjct: 168 MYTAMGSEWRPFGYPRRRRPLTSVVLGQGLADR--IVRDVREFIDNPKWYTDRGIPYRRG 225
Query: 237 YLLYGPPGTGKSTMIAAMANLLGYDLYDLELT--AVKDNTELRKLLIETSSKSIIVIEDI 294
YLLYGPPG GKS+ I A+A L + + L LT ++ D+ L LL +S++++ED+
Sbjct: 226 YLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDD-RLNHLLSVAPQQSLVLLEDV 284
Query: 295 DCS 297
D +
Sbjct: 285 DAA 287
Score = 138 (53.6 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 37/114 (32%), Positives = 64/114 (56%)
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKV 394
++T SGLLN +DG+ S R++ TTN++++LDPALIR GR+D + +CS+
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDMKEYVGYCSHWQLTQ 363
Query: 395 LAKNYLNIESHNLFDKI-GELLG-EAKMTPADVAEHLMP-KTFPADVEFSLRSL 445
+ + + ++ +L + G +L +++PA V + M K PA + SL
Sbjct: 364 MFQRFYPGQAPSLAEAFAGRVLQVTTQISPAQVQGYFMLYKNDPAGAIHNAESL 417
>ASPGD|ASPL0000007908 [details] [associations]
symbol:AN6397 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001301 eggNOG:COG0465 GO:GO:0017111
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
EMBL:AACD01000108 OrthoDB:EOG4BK8C9 RefSeq:XP_664001.1
ProteinModelPortal:Q5AZ83 EnsemblFungi:CADANIAT00006582
GeneID:2871293 KEGG:ani:AN6397.2 HOGENOM:HOG000201600 OMA:EEANAYS
Uniprot:Q5AZ83
Length = 518
Score = 270 (100.1 bits), Expect = 7.2e-21, P = 7.2e-21
Identities = 66/217 (30%), Positives = 111/217 (51%)
Query: 188 WVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSE--DFYARIGRAWKRGYLLYGPPGT 245
W + T+ ++ +KK ++DD+ + + + +YA G ++RGYL GPPGT
Sbjct: 204 WNRITTRPSRAISTVILDSCKKKAVLDDMREYLREDTRQWYANHGIPYRRGYLFSGPPGT 263
Query: 246 GKSTMIAAMANLLGYDLYDLELTAVK-DNTELRKLLIETSSKSIIVIEDIDCSLDLTGQR 304
GK+++ +A+A + G D+Y L L + +L E ++ ++++EDID + +T +R
Sbjct: 264 GKTSLSSALAGVFGLDIYVLSLLDPNISESHFLRLFSEVPTQCVVLLEDIDAA-GMTLKR 322
Query: 305 RXXXXXXXXXXXXXXPRQKLGKEERETNNSQ---VTLSGLLNFIDGLWSACGGERLIVFT 361
+K + S ++LS LLN IDG+ S G R+++ T
Sbjct: 323 ANEEPVTADTTASFDVMKKRARPGAPVPTSPPTPISLSALLNAIDGVSSQEG--RILIMT 380
Query: 362 TNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKN 398
TN + LDPALIR GR+D HI S F+ L ++
Sbjct: 381 TNAPQDLDPALIRPGRVDMHIRFELPSRVEFRELFRS 417
>UNIPROTKB|E1BWG5 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 EMBL:AADN02016784 IPI:IPI00579056
Ensembl:ENSGALT00000018571 Uniprot:E1BWG5
Length = 420
Score = 179 (68.1 bits), Expect = 7.5e-21, Sum P(2) = 7.5e-21
Identities = 44/141 (31%), Positives = 79/141 (56%)
Query: 163 SVLKEGREIKVRNRMRK--LYTNNGSNWVHVVF-EHPATFQTLAMEPAEKKEIIDDLIAF 219
++L+E RE+ ++ + + +YT G+ W F ++ +E + +++D+ F
Sbjct: 149 NILQEARELALQQQEGRTIMYTAMGTEWRQFGFPRRRRPLSSVVLEKGVSERLVEDVKEF 208
Query: 220 SKSEDFYARIGRA-WKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELT--AVKDNTEL 276
+ +Y G+A +RGYLLYGPPG GKS+ I A+A L + + L L+ ++ D+ L
Sbjct: 209 IDNPKWYIERGKAPVRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLSDRSLSDD-RL 267
Query: 277 RKLLIETSSKSIIVIEDIDCS 297
LL +SII++ED+D +
Sbjct: 268 NYLLSVAPQQSIILLEDVDAA 288
Score = 138 (53.6 bits), Expect = 7.5e-21, Sum P(2) = 7.5e-21
Identities = 37/114 (32%), Positives = 61/114 (53%)
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKV 394
++T SGLLN +DG+ S R++ TTNY+++LDPAL+R GR+D + HCS
Sbjct: 307 RLTFSGLLNALDGVAST--EARIVFMTTNYVDRLDPALVRPGRVDLKQYVGHCSRGQLAR 364
Query: 395 LAKNYLNIESHNLFDKIGE-LLGEAK-MTPADVAEHLMP-KTFPADVEFSLRSL 445
+ + + + ++ E L +K ++ A V H M KT P ++ S+
Sbjct: 365 MFQRFYPEQPPAAAERFAEQALAVSKQISAAQVQGHFMLYKTDPGGAIENIHSI 418
>UNIPROTKB|Q9Y276 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IMP] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IMP] [GO:0005750 "mitochondrial
respiratory chain complex III" evidence=TAS] Reactome:REACT_17015
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 EMBL:CH471063 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 HOGENOM:HOG000198799 HOVERGEN:HBG048759
OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617 EMBL:AF026849
EMBL:AF346835 EMBL:AF516670 EMBL:AF038195 EMBL:AK096210
EMBL:BX571752 EMBL:BC000416 EMBL:BC007500 IPI:IPI00003985
RefSeq:NP_001073335.1 RefSeq:NP_001244271.1 RefSeq:NP_001244272.1
RefSeq:NP_001244273.1 RefSeq:NP_004319.1 UniGene:Hs.471401
ProteinModelPortal:Q9Y276 SMR:Q9Y276 IntAct:Q9Y276
MINT:MINT-1433080 STRING:Q9Y276 PhosphoSite:Q9Y276 DMDM:46397351
PaxDb:Q9Y276 PeptideAtlas:Q9Y276 PRIDE:Q9Y276 DNASU:617
Ensembl:ENST00000359273 Ensembl:ENST00000392109
Ensembl:ENST00000392110 Ensembl:ENST00000392111
Ensembl:ENST00000412366 Ensembl:ENST00000431802
Ensembl:ENST00000439945 GeneID:617 KEGG:hsa:617 UCSC:uc002vip.3
GeneCards:GC02P219523 HGNC:HGNC:1020 HPA:HPA037700 HPA:HPA037701
MIM:124000 MIM:262000 MIM:603358 MIM:603647 neXtProt:NX_Q9Y276
Orphanet:123 Orphanet:53693 Orphanet:1460 Orphanet:255249
Orphanet:254902 PharmGKB:PA25327 InParanoid:Q9Y276 PhylomeDB:Q9Y276
GenomeRNAi:617 NextBio:2497 ArrayExpress:Q9Y276 Bgee:Q9Y276
CleanEx:HS_BCS1L Genevestigator:Q9Y276 GermOnline:ENSG00000074582
GO:GO:0005750 Uniprot:Q9Y276
Length = 419
Score = 177 (67.4 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 60/243 (24%), Positives = 115/243 (47%)
Query: 65 RSEAYSAIENYLSSKSS-TQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWWSSG 123
R +Y+ + ++L+ S+ TQ ++ +++ S + + + F +W+ G
Sbjct: 56 RDRSYAWLLSWLTRHSTRTQHLSVETSYLQHESGRISTKFEFVPSPGNHF----IWYR-G 110
Query: 124 K--HISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRK-- 179
K + +S+ + +TF D + ++L+E RE+ ++ K
Sbjct: 111 KWIRVERSREMQMIDLQTGTPWESVTFTALGTDRKV---FFNILEEARELALQQEEGKTV 167
Query: 180 LYTNNGSNWVHVVFEHPAT---FQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRG 236
+YT GS W F +P ++ ++ I+ D+ F + +Y G ++RG
Sbjct: 168 MYTAVGSEWRP--FGYPRRRRPLNSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRG 225
Query: 237 YLLYGPPGTGKSTMIAAMANLLGYDLYDLELT--AVKDNTELRKLLIETSSKSIIVIEDI 294
YLLYGPPG GKS+ I A+A L + + L LT ++ D+ L LL +S++++ED+
Sbjct: 226 YLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDD-RLNHLLSVAPQQSLVLLEDV 284
Query: 295 DCS 297
D +
Sbjct: 285 DAA 287
Score = 138 (53.6 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 36/116 (31%), Positives = 63/116 (54%)
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKV 394
++T SGLLN +DG+ S R++ TTN++++LDPALIR GR+D + +CS+
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQLTQ 363
Query: 395 LAKNYLNIESHNLFDKIGE--LLGEAKMTPADVAEHLMP-KTFPADVEFSLRSLNQ 447
+ + + ++ +L + E L +++PA V + M K P + SL +
Sbjct: 364 MFQRFYPGQAPSLAENFAEHVLRATNQISPAQVQGYFMLYKNDPVGAIHNAESLRR 419
>RGD|1359658 [details] [associations]
symbol:Bcs1l "BC1 (ubiquinol-cytochrome c reductase)
synthesis-like" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0007005
"mitochondrion organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly"
evidence=IEA;ISO] [GO:0033617 "mitochondrial respiratory chain
complex IV assembly" evidence=IEA;ISO] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA;ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1359658 GO:GO:0005739 GO:GO:0005524 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0
GO:GO:0034551 GO:GO:0033617 EMBL:CH474004 EMBL:BC083660
IPI:IPI00213929 RefSeq:NP_001007667.1 UniGene:Rn.15293
IntAct:Q5XIM0 STRING:Q5XIM0 Ensembl:ENSRNOT00000022632
GeneID:301514 KEGG:rno:301514 UCSC:RGD:1359658 InParanoid:Q5XIM0
NextBio:648873 Genevestigator:Q5XIM0 Uniprot:Q5XIM0
Length = 418
Score = 172 (65.6 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 44/142 (30%), Positives = 76/142 (53%)
Query: 163 SVLKEGREIKVRNRMRK--LYTNNGSNWVHVVFEHPAT---FQTLAMEPAEKKEIIDDLI 217
++L+E R + ++ K +YT GS W F +P ++ ++ I+ D+
Sbjct: 149 NILEEARALALQQEEGKTVMYTAVGSEWR--TFGYPRRRRPLDSVVLQQGLADRIVKDIR 206
Query: 218 AFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELT--AVKDNTE 275
F + +Y G ++RGYLLYGPPG GKS+ I A+A L + + L LT ++ D+
Sbjct: 207 EFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDD-R 265
Query: 276 LRKLLIETSSKSIIVIEDIDCS 297
L LL +S++++ED+D +
Sbjct: 266 LNHLLSVAPQQSLVLLEDVDAA 287
Score = 142 (55.0 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 37/114 (32%), Positives = 64/114 (56%)
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKV 394
++T SGLLN +DG+ S R++ TTN+I++LDPALIR GR+D + +CS+
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDLKEYVGYCSHWQLTQ 363
Query: 395 LAKNYLNIESHNLFDKIGE--LLGEAKMTPADVAEHLMP-KTFPADVEFSLRSL 445
+ + + ++ +L + E L ++++PA V + M K P ++ SL
Sbjct: 364 MFQRFYPGQAPSLAENFAEHVLKATSQISPAQVQGYFMLYKNDPMGAIHNVESL 417
>ASPGD|ASPL0000041452 [details] [associations]
symbol:AN3131 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001306 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EnsemblFungi:CADANIAT00009943 Uniprot:C8VII7
Length = 497
Score = 182 (69.1 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 42/132 (31%), Positives = 73/132 (55%)
Query: 171 IKVRNRMRKLYTNNGSNWVHVVFEHPA---TFQTLAMEPAEKKEIIDDLIAFSKSEDFYA 227
+K +Y + + W F P T ++ ++ K+ I++D+ F +E +Y
Sbjct: 220 VKANEGKTTIYRADTATWTP--FGDPRRKRTLDSVILDKGVKERIVEDVKDFLATESWYH 277
Query: 228 RIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELT--AVKDNTELRKLLIETSS 285
G ++RGYLLYGPPGTGKS+ I A+A L YD+ L L+ + D+ L +LL
Sbjct: 278 DRGIPYRRGYLLYGPPGTGKSSFIQAVAGELDYDIAILNLSERGMTDD-RLNRLLTIVPK 336
Query: 286 KSIIVIEDIDCS 297
++++++ED+D +
Sbjct: 337 RTLVLLEDVDAA 348
Score = 134 (52.2 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 36/107 (33%), Positives = 59/107 (55%)
Query: 327 EERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSH 386
+E + VT SGLLN +DG+ SA ER++ TTN++E+LD AL+R GR+D + +
Sbjct: 357 DEDGYRGANVTFSGLLNALDGVASA--EERIVFLTTNHVERLDEALVRPGRVDMTVRIGE 414
Query: 387 CS-YEAFKVLAKNYLNIESHNLFDKIG-ELLGEAKMTPADVAEHLMP 431
+ Y+A + Y +++S + + E L E + + E L P
Sbjct: 415 LTRYQATCFWERFYGDLDSTGSYKQAFLERLYELGLIENENGERLDP 461
>SGD|S000002783 [details] [associations]
symbol:BCS1 "Protein translocase and chaperone required for
Complex III assembly" species:4932 "Saccharomyces cerevisiae"
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;IDA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0008320 "protein
transmembrane transporter activity" evidence=IMP] [GO:0032979
"protein insertion into mitochondrial membrane from inner side"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051131 "chaperone-mediated protein complex assembly"
evidence=IMP;IPI] Reactome:REACT_85873 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000002783
GO:GO:0016021 GO:GO:0005829 GO:GO:0005524 GO:GO:0005743
GO:GO:0005758 EMBL:BK006938 GO:GO:0016887 Reactome:REACT_118590
EMBL:U28373 eggNOG:COG0465 GO:GO:0051131 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
GO:GO:0034551 OrthoDB:EOG4XWK6J EMBL:S47190 PIR:S61170
RefSeq:NP_010663.1 ProteinModelPortal:P32839 SMR:P32839
IntAct:P32839 STRING:P32839 PaxDb:P32839 EnsemblFungi:YDR375C
GeneID:851981 KEGG:sce:YDR375C CYGD:YDR375c NextBio:970127
Genevestigator:P32839 GermOnline:YDR375C GO:GO:0008320
GO:GO:0032979 Uniprot:P32839
Length = 456
Score = 189 (71.6 bits), Expect = 5.6e-20, Sum P(2) = 5.6e-20
Identities = 47/146 (32%), Positives = 80/146 (54%)
Query: 164 VLKEGREIKVRNRMRK--LYTNNGSNWVHVVFEHPATFQTLA---MEPAEKKEIIDDLIA 218
+L E ++I ++ K +YT+ G W F P + L ++ K+ I+DD+
Sbjct: 187 ILNEAKDIALKTTEGKTVIYTSFGPEWRK--FGQPKAKRMLPSVILDSGIKEGILDDVYD 244
Query: 219 FSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVK-DNTELR 277
F K+ +Y+ G ++RGYLLYGPPG+GK++ I A+A L Y++ L L+ + L
Sbjct: 245 FMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILNLSENNLTDDRLN 304
Query: 278 KLLIETSSKSIIVIEDIDCSLDLTGQ 303
L+ +SI+++EDID + + Q
Sbjct: 305 HLMNNMPERSILLLEDIDAAFNKRSQ 330
Score = 120 (47.3 bits), Expect = 5.6e-20, Sum P(2) = 5.6e-20
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 333 NSQVTLSGLLNFIDGLWSACGGERLIVF-TTNYIEKLDPALIRKGRMDKHIELSHCS-YE 390
+S VT SGLLN +DG+ S+ E I F TTN+ EKLD A++R GR+D + + + + Y+
Sbjct: 337 HSSVTFSGLLNALDGVTSS---EETITFMTTNHPEKLDAAIMRPGRIDYKVFVGNATPYQ 393
Query: 391 AFKVLAKNY 399
K+ K Y
Sbjct: 394 VEKMFMKFY 402
>CGD|CAL0005742 [details] [associations]
symbol:orf19.458 species:5476 "Candida albicans" [GO:0008320
"protein transmembrane transporter activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0032979 "protein insertion into mitochondrial membrane from
inner side" evidence=IEA] [GO:0051131 "chaperone-mediated protein
complex assembly" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 CGD:CAL0005742 GO:GO:0005524
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
HOGENOM:HOG000198799 EMBL:AACQ01000078 EMBL:AACQ01000077
RefSeq:XP_715892.1 RefSeq:XP_715943.1 ProteinModelPortal:Q5A283
STRING:Q5A283 GeneID:3642454 GeneID:3642502 KEGG:cal:CaO19.458
KEGG:cal:CaO19.8089 Uniprot:Q5A283
Length = 444
Score = 172 (65.6 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 47/158 (29%), Positives = 84/158 (53%)
Query: 146 LTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRKLYTNNGSNWVHVVFEHPATFQTLA-- 203
+T +RD L L+S K +K R ++T+ G W F P + + L
Sbjct: 159 VTLTTLYRDRKLFNDLLSEAKS-LALKAREGKTVIFTSWGPEWRP--FGQPRSKRLLGSV 215
Query: 204 -MEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDL 262
++ + I++D+ F S ++Y + G ++RGYLLYGPPG+GK++ I A+A L Y++
Sbjct: 216 ILDEGIAENIVNDVKDFLTSGEWYHKRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNI 275
Query: 263 YDLELTAVK-DNTELRKLLIETSSKSIIVIEDIDCSLD 299
L L+ + L L+ ++SI+++ED+D + +
Sbjct: 276 CILNLSENNLTDDRLNHLMNHIPNRSILLLEDVDAAFN 313
Score = 129 (50.5 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 333 NSQVTLSGLLNFIDGLWSACGGERLIVF-TTNYIEKLDPALIRKGRMDKHIELSHCS-YE 390
N+ VT SGLLN +DG+ SA E I F TTN+ EKLDPAL+R GR+D + + + + ++
Sbjct: 324 NNGVTFSGLLNALDGVASA---EECITFMTTNHPEKLDPALLRPGRVDYKVMIDNATEHQ 380
Query: 391 AFKVLAKNYLNIE 403
++ + Y N E
Sbjct: 381 VKRMFLRFYENEE 393
>UNIPROTKB|G4MYI1 [details] [associations]
symbol:MGG_10383 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003713408.1 ProteinModelPortal:G4MYI1
EnsemblFungi:MGG_10383T0 GeneID:2681994 KEGG:mgr:MGG_10383
Uniprot:G4MYI1
Length = 494
Score = 159 (61.0 bits), Expect = 8.5e-19, Sum P(2) = 8.5e-19
Identities = 37/119 (31%), Positives = 65/119 (54%)
Query: 180 LYTNNGSNWVHVVF-EHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYL 238
+Y G +W + ++ E K+ I++D+ F +YA G ++R YL
Sbjct: 217 VYNIQGMSWAQLGLPRRKRPLASVVFEKGLKEAIVEDVQDFLSRHQWYADRGIPYRRTYL 276
Query: 239 LYGPPGTGKSTMIAAMANLLGYDLYDLELT--AVKDNTELRKLLIETSSKSIIVIEDID 295
L+GPPG+GKS+ I A+A L Y+L + L + D+ +L +L+ +SI+++ED+D
Sbjct: 277 LHGPPGSGKSSFIHALAGELDYNLAIVNLVERGLTDD-KLANMLMRLPPRSILLLEDVD 334
Score = 143 (55.4 bits), Expect = 8.5e-19, Sum P(2) = 8.5e-19
Identities = 30/74 (40%), Positives = 50/74 (67%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYE- 390
+ + VT SGLLN +DG+ A G +R+ TTNY+E+LDPALIR GR+D + + + E
Sbjct: 349 SGATVTYSGLLNVLDGM--AAGEDRIAFLTTNYVERLDPALIRPGRVDVKVRVGEATPEQ 406
Query: 391 AFKVLAKNYLNIES 404
A ++ ++ Y ++++
Sbjct: 407 AAELWSRFYGDVDT 420
>GENEDB_PFALCIPARUM|PFF0155w [details] [associations]
symbol:PFF0155w "bcs1-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0006461
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:AL844505
RefSeq:XP_966022.1 ProteinModelPortal:C6KSN2
EnsemblProtists:PFF0155w:mRNA GeneID:3885965 KEGG:pfa:PFF0155w
EuPathDB:PlasmoDB:PF3D7_0603200 ProtClustDB:CLSZ2429496
Uniprot:C6KSN2
Length = 471
Score = 233 (87.1 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 79/284 (27%), Positives = 130/284 (45%)
Query: 180 LYTNNGSNWVHVVFEHPATFQTL--AMEPAEKKE-IIDDLIAFSKSEDFYARIGRAWKRG 236
+Y + G W F +P + + + P E II+D+ F S +Y G ++R
Sbjct: 196 VYKSFGPEWRP--FGNPKNKRPINSVILPENLNEYIINDIQTFLNSSKWYIDKGIPYRRC 253
Query: 237 YLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVK-DNTELRKLLIETSSKSIIVIEDID 295
YLL+GPPG GKS++I A+A +++ + + + + LL K+I+++EDID
Sbjct: 254 YLLHGPPGCGKSSLITALAGYFDFNICTININDIYLTDDRFIHLLATIPPKTILILEDID 313
Query: 296 CSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ-VTLSGLLNFIDGLWSACGG 354
+ G T + V+ SGLLN +DG+ +
Sbjct: 314 FIFINDPIMKYTNNDQNSSSNSSI---FTGTNNHSTIKTLGVSYSGLLNALDGIVAT--E 368
Query: 355 ERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIESHNLFDKIGEL 414
ER+I TTN IEKL P LIR GR+D I + + + +K + + E H L +K ++
Sbjct: 369 ERIIFMTTNNIEKLPPTLIRPGRVDMKILIPYANIYQYKKMFLRFFP-EHHELSNKFAKI 427
Query: 415 LGEAKMTPADVAEH-LMPKTFP----ADVEFSLRSLNQALELAK 453
+ ++ A++ L K P + E +R+ QA E K
Sbjct: 428 FQDFNLSMAEIQSFFLFSKVDPYKTVQNAEEWVRTYAQARENKK 471
Score = 37 (18.1 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 4 KDLFTSLGSIIASGMFLWAM 23
K++FTSL I + W +
Sbjct: 73 KNIFTSLEITINDNAYYWIL 92
>UNIPROTKB|C6KSN2 [details] [associations]
symbol:PFF0155w "Bcs1 protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0006461 GO:GO:0016887 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EMBL:AL844505 RefSeq:XP_966022.1
ProteinModelPortal:C6KSN2 EnsemblProtists:PFF0155w:mRNA
GeneID:3885965 KEGG:pfa:PFF0155w EuPathDB:PlasmoDB:PF3D7_0603200
ProtClustDB:CLSZ2429496 Uniprot:C6KSN2
Length = 471
Score = 233 (87.1 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 79/284 (27%), Positives = 130/284 (45%)
Query: 180 LYTNNGSNWVHVVFEHPATFQTL--AMEPAEKKE-IIDDLIAFSKSEDFYARIGRAWKRG 236
+Y + G W F +P + + + P E II+D+ F S +Y G ++R
Sbjct: 196 VYKSFGPEWRP--FGNPKNKRPINSVILPENLNEYIINDIQTFLNSSKWYIDKGIPYRRC 253
Query: 237 YLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVK-DNTELRKLLIETSSKSIIVIEDID 295
YLL+GPPG GKS++I A+A +++ + + + + LL K+I+++EDID
Sbjct: 254 YLLHGPPGCGKSSLITALAGYFDFNICTININDIYLTDDRFIHLLATIPPKTILILEDID 313
Query: 296 CSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ-VTLSGLLNFIDGLWSACGG 354
+ G T + V+ SGLLN +DG+ +
Sbjct: 314 FIFINDPIMKYTNNDQNSSSNSSI---FTGTNNHSTIKTLGVSYSGLLNALDGIVAT--E 368
Query: 355 ERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIESHNLFDKIGEL 414
ER+I TTN IEKL P LIR GR+D I + + + +K + + E H L +K ++
Sbjct: 369 ERIIFMTTNNIEKLPPTLIRPGRVDMKILIPYANIYQYKKMFLRFFP-EHHELSNKFAKI 427
Query: 415 LGEAKMTPADVAEH-LMPKTFP----ADVEFSLRSLNQALELAK 453
+ ++ A++ L K P + E +R+ QA E K
Sbjct: 428 FQDFNLSMAEIQSFFLFSKVDPYKTVQNAEEWVRTYAQARENKK 471
Score = 37 (18.1 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 4 KDLFTSLGSIIASGMFLWAM 23
K++FTSL I + W +
Sbjct: 73 KNIFTSLEITINDNAYYWIL 92
>TAIR|locus:2115914 [details] [associations]
symbol:AT4G05340 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004
PROSITE:PS00674 GO:GO:0005524 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016787 eggNOG:COG0465
EMBL:AL161503 HSSP:P28691 IPI:IPI00522068 PIR:B85067
RefSeq:NP_192443.1 UniGene:At.54163 ProteinModelPortal:Q9M0W1
SMR:Q9M0W1 EnsemblPlants:AT4G05340.1 GeneID:825882
KEGG:ath:AT4G05340 TAIR:At4g05340 InParanoid:Q9M0W1
PhylomeDB:Q9M0W1 ArrayExpress:Q9M0W1 Genevestigator:Q9M0W1
Uniprot:Q9M0W1
Length = 96
Score = 207 (77.9 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 40/77 (51%), Positives = 56/77 (72%)
Query: 326 KEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELS 385
+ +++ N+ QV+LSGLL F+DGLWS ER+I+FTTN+ EKLDPA +R G+MD HI +
Sbjct: 17 QNKKKKNDPQVSLSGLLYFVDGLWSNSVEERIIIFTTNHKEKLDPAFLRPGKMDVHILMD 76
Query: 386 HCSYEAFKVLAKNYLNI 402
+C+ FK L YL+I
Sbjct: 77 YCTPVVFKKLDALYLDI 93
>UNIPROTKB|G4MN83 [details] [associations]
symbol:MGG_02058 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:CM001231 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 RefSeq:XP_003708818.1
EnsemblFungi:MGG_02058T0 GeneID:2681213 KEGG:mgr:MGG_02058
Uniprot:G4MN83
Length = 566
Score = 226 (84.6 bits), Expect = 9.4e-16, P = 9.4e-16
Identities = 72/282 (25%), Positives = 130/282 (46%)
Query: 188 WVHVVFEHPATFQTLAMEPAEKKEIIDDLIAF--SKSEDFYARIGRAWKRGYLLYGPPGT 245
W V T+ ++ +K ++ D+ + K+E +Y+ G +RGYL +GPPGT
Sbjct: 258 WREVAKRPVRPISTVVLDQEQKTAVLSDMNEYLQPKTECWYSNRGIPLRRGYLFHGPPGT 317
Query: 246 GKSTMIAAMANLLGYDLYDLELTAVK-DNTELRKLLIETSSKSIIVIEDIDCS--LDLTG 302
GK+++ A+A + G ++Y + L + + +L L + I+++EDID + G
Sbjct: 318 GKTSLSFALAGVFGLEIYVISLIEPQLSDEDLSTLFNGLPRRCIVLLEDIDTAGMSRAEG 377
Query: 303 QRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ--VTLSGLLNFIDGLWSACGGERLIVF 360
+ R + K R + Q +++SGLLN IDG+ +A G R+ +
Sbjct: 378 EIRTETKTEGPSEWKVADLARALKVGRGHGDDQKGISMSGLLNVIDGV-AAHEG-RIFIM 435
Query: 361 TTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIESHNLFDKIGELLGEAKM 420
TTN E LD ALIR GR+D + + + + L + + E + +
Sbjct: 436 TTNKPEILDEALIRSGRVDLQVAFRNATQQQASELFQRLYSTEK--------SVKSSRCL 487
Query: 421 TPADVAEHLMPKTFPADVEFSLRSLNQALELAKEEARRVKVD 462
+P D + D+E S+ ++ +E+A E ++ D
Sbjct: 488 SPLDATDK------KDDLETSITDADELIEMAAEFGSKIVPD 523
>UNIPROTKB|G4NGV5 [details] [associations]
symbol:MGG_04018 "Mitochondrial chaperone BCS1, variant"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:CM001236 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003719831.1 EnsemblFungi:MGG_04018T1 GeneID:2677451
KEGG:mgr:MGG_04018 Uniprot:G4NGV5
Length = 610
Score = 149 (57.5 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 33/112 (29%), Positives = 60/112 (53%)
Query: 187 NWVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSED--FYARIGRAWKRGYLLYGPPG 244
+W V T+ ++ +K ++ D+ + + E +YA G +RGYL +GPPG
Sbjct: 270 SWTSVANRPVRPMNTVVLDQKQKTAVLSDMNEYLQPETPRWYANRGIPLRRGYLFHGPPG 329
Query: 245 TGKSTMIAAMANLLGYDLYDLELTAVKDNTE-LRKLLIETSSKSIIVIEDID 295
TGK+++ A+A + G D+Y + L + + E L L + ++++EDID
Sbjct: 330 TGKTSLSFALAGVFGLDIYVVSLLEPQLSEEDLSNLFNCLPRRCVVLLEDID 381
Score = 118 (46.6 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYE-AFKV 394
++LSGLLN IDG+ S G R+++ TTN E LD ALIR GR+D + S+ + E A ++
Sbjct: 442 ISLSGLLNAIDGVASHEG--RVLIMTTNRPESLDDALIRPGRVDLQVAFSNATQEQASEL 499
Query: 395 LAKNY 399
+ Y
Sbjct: 500 FQRMY 504
>UNIPROTKB|H7BZF6 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7BZF6 Ensembl:ENST00000436603 Uniprot:H7BZF6
Length = 121
Score = 131 (51.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 233 WKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELT--AVKDNTELRKLLIETSSKSIIV 290
++RGYLLYGPPG GKS+ I A+A L + + L LT ++ D+ L LL +S+++
Sbjct: 4 YRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDD-RLNHLLSVAPQQSLVL 62
Query: 291 IEDIDCS 297
+ED+D +
Sbjct: 63 LEDVDAA 69
Score = 65 (27.9 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEK 367
++T SGLLN +DG+ S R++ TTN++++
Sbjct: 88 RLTFSGLLNALDGVAST--EARIVFMTTNHVDR 118
>UNIPROTKB|C9J1S9 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 GO:GO:0005739
GO:GO:0005524 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
IPI:IPI00927724 ProteinModelPortal:C9J1S9 SMR:C9J1S9 STRING:C9J1S9
Ensembl:ENST00000443791 ArrayExpress:C9J1S9 Bgee:C9J1S9
Uniprot:C9J1S9
Length = 150
Score = 146 (56.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 37/111 (33%), Positives = 59/111 (53%)
Query: 163 SVLKEGREIKVRNRMRK--LYTNNGSNWVHVVFEHPAT---FQTLAMEPAEKKEIIDDLI 217
++L+E RE+ ++ K +YT GS W F +P ++ ++ I+ D+
Sbjct: 29 NILEEARELALQQEEGKTVMYTAVGSEWRP--FGYPRRRRPLNSVVLQQGLADRIVRDVQ 86
Query: 218 AFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELT 268
F + +Y G ++RGYLLYGPPG GKS+ I A+A L + + L LT
Sbjct: 87 EFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLT 137
>UNIPROTKB|H7C492 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 GO:GO:0005524
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7C492 Ensembl:ENST00000426649 Uniprot:H7C492
Length = 201
Score = 138 (53.6 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 36/116 (31%), Positives = 63/116 (54%)
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKV 394
++T SGLLN +DG+ S R++ TTN++++LDPALIR GR+D + +CS+
Sbjct: 88 RLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQLTQ 145
Query: 395 LAKNYLNIESHNLFDKIGE--LLGEAKMTPADVAEHLMP-KTFPADVEFSLRSLNQ 447
+ + + ++ +L + E L +++PA V + M K P + SL +
Sbjct: 146 MFQRFYPGQAPSLAENFAEHVLRATNQISPAQVQGYFMLYKNDPVGAIHNAESLRR 201
Score = 48 (22.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 13/49 (26%), Positives = 28/49 (57%)
Query: 251 IAAMANLLGYDLYDLELT--AVKDNTELRKLLIETSSKSIIVIEDIDCS 297
+ ++A L + + L LT ++ D+ L LL +S++++ED+D +
Sbjct: 22 VLSLAGELEHSICLLSLTDSSLSDD-RLNHLLSVAPQQSLVLLEDVDAA 69
>UNIPROTKB|G4MMM3 [details] [associations]
symbol:MGG_16395 "ATP-dependent Zn protease" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524
GO:GO:0006508 GO:GO:0008233 EMBL:CM001231 RefSeq:XP_003710407.1
ProteinModelPortal:G4MMM3 EnsemblFungi:MGG_16395T0 GeneID:12986318
KEGG:mgr:MGG_16395 Uniprot:G4MMM3
Length = 477
Score = 144 (55.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 197 ATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
A++ + ++P+ K+ +IDD ++F KS Y ++ WKRG + YGPPG GK+ I A N
Sbjct: 190 ASWDNVILDPSMKQALIDDHMSFFKSRGQYEKLKVPWKRGIIYYGPPGNGKTVSIKATMN 249
Query: 257 LLGYDLYD 264
+L Y L D
Sbjct: 250 ML-YKLKD 256
Score = 61 (26.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 339 SGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRK-GRMDK 380
S LN +DGL + G ++ +TN++E+LDP + ++ R D+
Sbjct: 306 SYFLNEVDGLKNNDG--IFMIGSTNHLERLDPGISKRPSRFDR 346
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 157 (60.3 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 69/228 (30%), Positives = 104/228 (45%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYD--- 264
E KE I + + F K+ FY R+G RG +L GPPGTGK+ + A A
Sbjct: 303 EAKEEIMEFVKFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSG 362
Query: 265 ---LELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
LE+ + +R L T+ K+ I ID +D G+ R
Sbjct: 363 SEFLEMFVGVGPSRVRDLFA-TARKNAPCIIFID-EIDAIGKARGRGG------------ 408
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFT-TNYIEKLDPALIRKGRMDK 380
Q +ERE+ TL+ LL +DG S+ E ++VF TN + LDPAL+R GR D+
Sbjct: 409 QFGSNDERES-----TLNQLLVEMDGFTSS---EHIVVFAGTNRPDVLDPALLRPGRFDR 460
Query: 381 HIELSHCSYEAFKVLAKNYL-NIESHNLFDKIGELLG--EAKMTPADV 425
I + + + K +L +I++ + D I + L + T AD+
Sbjct: 461 QITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADI 508
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 152 (58.6 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 59/195 (30%), Positives = 93/195 (47%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNT--ELRKLLI 281
+ + R+G +G LLYGPPGTGK+ + A+A+ L + + +A+ D E +L+
Sbjct: 165 ELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIR 224
Query: 282 ETSSKS------IIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
E + + II +++ID G RR +RE Q
Sbjct: 225 EMFNYARDHQPCIIFMDEIDA----IGGRRFSEGTSA---------------DREI---Q 262
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA-FKV 394
TL LLN +DG S G+ ++ TN + LDPAL+R GR+D+ IE+ + +A ++
Sbjct: 263 RTLMELLNQMDGFDSL--GQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQARLEI 320
Query: 395 LAKNYLNIESHNLFD 409
L + L I H D
Sbjct: 321 LKIHALKIAKHGEID 335
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 155 (59.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 67/219 (30%), Positives = 103/219 (47%)
Query: 199 FQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLL 258
F+ +A EK+E+++ ++ F K +A +G +G LL GPPGTGK+ + A A
Sbjct: 160 FKDVAGADEEKQELVE-VVEFLKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAGEA 218
Query: 259 GYDLYDL------ELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXX 312
G + + E+ + +R L E + K+ + ID +D G++R
Sbjct: 219 GVPFFSISGSDFVEMFVGVGASRVRDLF-ENAKKNAPCLIFID-EIDAVGRQRGAGLGG- 275
Query: 313 XXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPAL 372
G +ERE TL+ LL +DG +SA G +I+ TN + LDPAL
Sbjct: 276 ------------GHDEREQ-----TLNQLLVEMDG-FSANEGI-IIIAATNRADILDPAL 316
Query: 373 IRKGRMDKHIELSH---CSYEA-FKVLAKNYLNIESHNL 407
+R GR D+ I + EA KV A+N E+ NL
Sbjct: 317 LRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNL 355
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 151 (58.2 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 57/168 (33%), Positives = 82/168 (48%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTEL-R 277
++Y +G +G +LYGPPGTGK+ + A+AN + EL + D +L R
Sbjct: 136 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 195
Query: 278 KL--LIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
+L + E + SI+ I++ID G +R ERE Q
Sbjct: 196 ELFRVAEEHAPSIVFIDEIDA----IGTKRYDSNSGG---------------EREI---Q 233
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
T+ LLN +DG S G+ ++ TN IE LDPALIR GR+D+ IE
Sbjct: 234 RTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIE 279
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 149 (57.5 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 57/170 (33%), Positives = 82/170 (48%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN--------LLGYDLYDLEL-TAVKDNT 274
+ Y IG +G +LYGPPGTGK+ + A+AN ++G +L L K
Sbjct: 217 ELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVR 276
Query: 275 ELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNS 334
E+ K+ E + SI+ I++ID G +R ERE
Sbjct: 277 EMFKVA-EEHAPSIVFIDEIDA----VGTKRYEATSGG---------------EREI--- 313
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
Q T+ LLN +DG S G+ ++ TN I+ LDPALIR GR+D+ I+L
Sbjct: 314 QRTMLELLNQLDGFDSR--GDVKVIMATNRIDSLDPALIRPGRIDRKIQL 361
Score = 46 (21.3 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 61 DRFMRSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGI 116
D + E Y + + S +LK D ++ S +S+ EE+ DE GI
Sbjct: 79 DYLLLEEEYITNQEQIKSSDDKNYVKLKIDDLRGSP----VSVGTLEELIDENHGI 130
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 149 (57.5 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 57/170 (33%), Positives = 82/170 (48%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN--------LLGYDLYDLEL-TAVKDNT 274
+ Y IG +G +LYGPPGTGK+ + A+AN ++G +L L K
Sbjct: 217 ELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVR 276
Query: 275 ELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNS 334
E+ K+ E + SI+ I++ID G +R ERE
Sbjct: 277 EMFKVA-EEHAPSIVFIDEIDA----VGTKRYEATSGG---------------EREI--- 313
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
Q T+ LLN +DG S G+ ++ TN I+ LDPALIR GR+D+ I+L
Sbjct: 314 QRTMLELLNQLDGFDSR--GDVKVIMATNRIDSLDPALIRPGRIDRKIQL 361
Score = 46 (21.3 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 61 DRFMRSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGI 116
D + E Y + + S +LK D ++ S +S+ EE+ DE GI
Sbjct: 79 DYLLLEEEYITNQEQIKSSDDKNYVKLKIDDLRGSP----VSVGTLEELIDENHGI 130
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 152 (58.6 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 57/168 (33%), Positives = 82/168 (48%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTEL-R 277
++Y +G +G +LYGPPGTGK+ + A+AN + EL + D +L R
Sbjct: 208 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 267
Query: 278 KL--LIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
+L + E + SI+ I++ID G +R ERE Q
Sbjct: 268 ELFRVAEEHAPSIVFIDEIDA----VGTKRYDSNSGG---------------EREI---Q 305
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
T+ LLN +DG S G+ ++ TN IE LDPALIR GR+D+ IE
Sbjct: 306 RTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIE 351
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 56/187 (29%), Positives = 88/187 (47%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTM---IAAMANLLGYDLYDLE 266
+E+I+ ++ +D + +G +G L+YGPPGTGK+ M +AA L +
Sbjct: 187 QELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQ 246
Query: 267 LTA--VKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKL 324
L + D +L + + + I ID LD G +R +K
Sbjct: 247 LVQMFIGDGAKLVRDAFALAKEKAPAIIFID-ELDAIGTKRFDS-------------EKA 292
Query: 325 GKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
G +RE Q T+ LLN +DG + ++ TN I+ LDPAL+R GR+D+ IEL
Sbjct: 293 G--DREV---QRTMLELLNQLDGFQP--NDDIKVIAATNRIDVLDPALLRSGRLDRKIEL 345
Query: 385 SHCSYEA 391
H + +A
Sbjct: 346 PHPNEDA 352
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 56/187 (29%), Positives = 88/187 (47%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTM---IAAMANLLGYDLYDLE 266
+E+I+ ++ +D + +G +G L+YGPPGTGK+ M +AA L +
Sbjct: 187 QELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQ 246
Query: 267 LTA--VKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKL 324
L + D +L + + + I ID LD G +R +K
Sbjct: 247 LVQMFIGDGAKLVRDAFALAKEKAPAIIFID-ELDAIGTKRFDS-------------EKA 292
Query: 325 GKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
G +RE Q T+ LLN +DG + ++ TN I+ LDPAL+R GR+D+ IEL
Sbjct: 293 G--DREV---QRTMLELLNQLDGFQP--NDDIKVIAATNRIDVLDPALLRSGRLDRKIEL 345
Query: 385 SHCSYEA 391
H + +A
Sbjct: 346 PHPNEDA 352
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 57/168 (33%), Positives = 82/168 (48%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTEL-R 277
++Y +G +G +LYGPPGTGK+ + A+AN + EL + D +L R
Sbjct: 207 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 266
Query: 278 KL--LIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
+L + E + SI+ I++ID G +R ERE Q
Sbjct: 267 ELFRVAEEHAPSIVFIDEIDA----IGTKRYDSNSGG---------------EREI---Q 304
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
T+ LLN +DG S G+ ++ TN IE LDPALIR GR+D+ IE
Sbjct: 305 RTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIE 350
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 57/168 (33%), Positives = 82/168 (48%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTEL-R 277
++Y +G +G +LYGPPGTGK+ + A+AN + EL + D +L R
Sbjct: 208 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 267
Query: 278 KL--LIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
+L + E + SI+ I++ID G +R ERE Q
Sbjct: 268 ELFRVAEEHAPSIVFIDEIDA----IGTKRYDSNSGG---------------EREI---Q 305
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
T+ LLN +DG S G+ ++ TN IE LDPALIR GR+D+ IE
Sbjct: 306 RTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIE 351
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 57/168 (33%), Positives = 82/168 (48%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTEL-R 277
++Y +G +G +LYGPPGTGK+ + A+AN + EL + D +L R
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268
Query: 278 KL--LIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
+L + E + SI+ I++ID G +R ERE Q
Sbjct: 269 ELFRVAEEHAPSIVFIDEIDA----IGTKRYDSNSGG---------------EREI---Q 306
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
T+ LLN +DG S G+ ++ TN IE LDPALIR GR+D+ IE
Sbjct: 307 RTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIE 352
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 57/168 (33%), Positives = 82/168 (48%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTEL-R 277
++Y +G +G +LYGPPGTGK+ + A+AN + EL + D +L R
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268
Query: 278 KL--LIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
+L + E + SI+ I++ID G +R ERE Q
Sbjct: 269 ELFRVAEEHAPSIVFIDEIDA----IGTKRYDSNSGG---------------EREI---Q 306
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
T+ LLN +DG S G+ ++ TN IE LDPALIR GR+D+ IE
Sbjct: 307 RTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIE 352
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 57/168 (33%), Positives = 82/168 (48%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTEL-R 277
++Y +G +G +LYGPPGTGK+ + A+AN + EL + D +L R
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268
Query: 278 KL--LIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
+L + E + SI+ I++ID G +R ERE Q
Sbjct: 269 ELFRVAEEHAPSIVFIDEIDA----IGTKRYDSNSGG---------------EREI---Q 306
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
T+ LLN +DG S G+ ++ TN IE LDPALIR GR+D+ IE
Sbjct: 307 RTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIE 352
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 57/168 (33%), Positives = 82/168 (48%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTEL-R 277
++Y +G +G +LYGPPGTGK+ + A+AN + EL + D +L R
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268
Query: 278 KL--LIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
+L + E + SI+ I++ID G +R ERE Q
Sbjct: 269 ELFRVAEEHAPSIVFIDEIDA----IGTKRYDSNSGG---------------EREI---Q 306
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
T+ LLN +DG S G+ ++ TN IE LDPALIR GR+D+ IE
Sbjct: 307 RTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIE 352
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 57/168 (33%), Positives = 82/168 (48%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTEL-R 277
++Y +G +G +LYGPPGTGK+ + A+AN + EL + D +L R
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268
Query: 278 KL--LIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
+L + E + SI+ I++ID G +R ERE Q
Sbjct: 269 ELFRVAEEHAPSIVFIDEIDA----IGTKRYDSNSGG---------------EREI---Q 306
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
T+ LLN +DG S G+ ++ TN IE LDPALIR GR+D+ IE
Sbjct: 307 RTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIE 352
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 57/168 (33%), Positives = 82/168 (48%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTEL-R 277
++Y +G +G +LYGPPGTGK+ + A+AN + EL + D +L R
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268
Query: 278 KL--LIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
+L + E + SI+ I++ID G +R ERE Q
Sbjct: 269 ELFRVAEEHAPSIVFIDEIDA----IGTKRYDSNSGG---------------EREI---Q 306
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
T+ LLN +DG S G+ ++ TN IE LDPALIR GR+D+ IE
Sbjct: 307 RTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIE 352
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 53/167 (31%), Positives = 83/167 (49%)
Query: 226 YARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNT--ELRKLLIET 283
Y R+G +G LLYGPPGTGK+ + AMA+ + + + ++A+ D E +++ E
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREM 222
Query: 284 SSKS------IIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVT 337
+ + II +++ID G RR +RE Q T
Sbjct: 223 FNYAKEHQPCIIFMDEIDA----IGGRRFSQGTSA---------------DREI---QRT 260
Query: 338 LSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
L LLN +DG + G ++I+ TN + LDPAL+R GR+D+ IE+
Sbjct: 261 LMELLNHLDG-FEELGNVKIIM-ATNRPDVLDPALVRPGRLDRKIEI 305
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 53/167 (31%), Positives = 83/167 (49%)
Query: 226 YARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNT--ELRKLLIET 283
Y R+G +G LLYGPPGTGK+ + AMA+ + + + ++A+ D E +++ E
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREM 222
Query: 284 SSKS------IIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVT 337
+ + II +++ID G RR +RE Q T
Sbjct: 223 FNYAKEHQPCIIFMDEIDA----IGGRRFSQGTSA---------------DREI---QRT 260
Query: 338 LSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
L LLN +DG + G ++I+ TN + LDPAL+R GR+D+ IE+
Sbjct: 261 LMELLNHLDG-FEELGNVKIIM-ATNRPDVLDPALVRPGRLDRKIEI 305
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 153 (58.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 66/219 (30%), Positives = 102/219 (46%)
Query: 199 FQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLL 258
F+ +A EK+E+++ ++ F K +A +G +G LL GPPGTGK+ + A+A
Sbjct: 161 FRDVAGADEEKQELVE-VVEFLKDPRKFAEVGARIPKGVLLVGPPGTGKTLLARAVAGEA 219
Query: 259 GYDLYDL------ELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXX 312
G + + E+ + +R L E + K+ I ID +D G++R
Sbjct: 220 GVPFFSISGSDFVEMFVGVGASRVRDLF-ENAKKNAPCIIFID-EIDAVGRQRGAGLGG- 276
Query: 313 XXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPAL 372
G +ERE TL+ LL +DG + G +I+ TN + LDPAL
Sbjct: 277 ------------GHDEREQ-----TLNQLLVEMDGFGANEG--IIIIAATNRPDILDPAL 317
Query: 373 IRKGRMDKHIELSHCSY---EA-FKVLAKNYLNIESHNL 407
+R GR D+ I + EA KV A+N E+ NL
Sbjct: 318 LRPGRFDRQITVDRPDVNGREAVLKVHARNKPLDENINL 356
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 150 (57.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 57/168 (33%), Positives = 81/168 (48%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTEL-R 277
++Y +G +G +LYGPPGTGK+ + A+AN + EL + D +L R
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268
Query: 278 KL--LIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
+L + E SI+ I++ID G +R ERE Q
Sbjct: 269 ELFRVAEEHGPSIVFIDEIDA----IGTKRYDSNSGG---------------EREI---Q 306
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
T+ LLN +DG S G+ ++ TN IE LDPALIR GR+D+ IE
Sbjct: 307 RTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIE 352
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 109 (43.4 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 31/106 (29%), Positives = 54/106 (50%)
Query: 198 TFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANL 257
TF+ +A K+EI++ ++F K Y ++G +G +L GPPGTGK+ + A A
Sbjct: 352 TFKDVAGMDEAKEEIME-FVSFLKDPSRYKKLGARIPKGAILSGPPGTGKTLLAKATAGE 410
Query: 258 LGYDLYDL------ELTAVKDNTELRKLLIETSSKS--IIVIEDID 295
G + Y + E+ + +R L E + + I+ I++ID
Sbjct: 411 AGVNFYTISGSDFIEMFVGVGPSRVRDLFKEARANTPCIVFIDEID 456
Score = 93 (37.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 38/112 (33%), Positives = 56/112 (50%)
Query: 321 RQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFT-TNYIEKLDPALIRKGRMD 379
R + G E N TL+ LL +DG S G ++VF TN + LDPAL+R GR D
Sbjct: 462 RSRGGFHNDEREN---TLNQLLVEMDGFSSTSG---VVVFAGTNRSDVLDPALLRPGRFD 515
Query: 380 KHIELSHCSYEAFKVLAKNYL-NIESHNLFDKIGELLGEAKMTP----ADVA 426
+ I + + K + +L NI+ ++I + L A +TP AD+A
Sbjct: 516 RQIYVGKPDIKGRKDIFMVHLKNIKLDGEMEEIAKKL--ATLTPGFSGADIA 565
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 56/185 (30%), Positives = 90/185 (48%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLEL 267
E +E+I+ + K+ + + R+G +G LLYGPPGTGK+ + A+A +G +
Sbjct: 183 ELREVIELPL---KNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPA 239
Query: 268 TAVKDNT--ELRKLLIETSSKS------IIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXX 319
+A+ D E +L+ E + + II ++++D G RR
Sbjct: 240 SAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDA----IGGRRFSEGTSA------- 288
Query: 320 PRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMD 379
+RE Q TL LLN +DG + G+ I+ TN + LDPAL+R GR+D
Sbjct: 289 --------DREI---QRTLMELLNQMDGFDTL--GQTKIIMATNRPDTLDPALLRAGRLD 335
Query: 380 KHIEL 384
+ IE+
Sbjct: 336 RKIEI 340
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 55/184 (29%), Positives = 87/184 (47%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLEL 267
E +E+I+ + K+ + + R+G +G LLYGPPGTGK+ + A+A LG + +
Sbjct: 143 ELREVIELPL---KNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVS 199
Query: 268 TAVKDNT--ELRKLLIET-----SSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXP 320
+A+ D E +++ E + ++ D +D G RR
Sbjct: 200 SAIVDKYIGESARIIREMFGYAKEHEPCVIFMD---EIDAIGGRRFSEGTSA-------- 248
Query: 321 RQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDK 380
+RE Q TL LLN +DG G+ I+ TN + LDPAL+R GR+D+
Sbjct: 249 -------DREI---QRTLMELLNQMDGFDYL--GQTKIIMATNRPDTLDPALLRPGRLDR 296
Query: 381 HIEL 384
IE+
Sbjct: 297 KIEI 300
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 149 (57.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 82/301 (27%), Positives = 129/301 (42%)
Query: 100 VLSMDDHEEVADEFQGIKLWWSSGKHISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGP 159
+L +D E A+E I L + KS V +T + Y L H L G
Sbjct: 120 LLDLDVEAEAAEEGANIDL---DATRVGKSAVIK--TSTRQTIYLPLIGLVDHEKLKPGD 174
Query: 160 YLVSVLKEGREIKVRNRMRKLYTNNGSNWVHVVFEHPATFQT-LAMEPAEKKEIIDDLIA 218
L+ V K+ + + + Y N V E P T + + +EI++ ++
Sbjct: 175 -LIGVNKDS--YLILDTLPAEYDNRVK--AMEVDEKPTEKYTDIGGLDKQIEEIVEAIVW 229
Query: 219 FSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMA---NLLGYDLYDLELTA--VKDN 273
K + + ++G +G L+YGPPGTGK+ + A A N L +L + D
Sbjct: 230 PMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETNATFLKLAGPQLVQMFIGDG 289
Query: 274 TELRK---LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERE 330
+L + L + + SII I++ LD G +R +K G +RE
Sbjct: 290 AKLVRDCFALAKEKAPSIIFIDE----LDAVGTKRFDS-------------EKSG--DRE 330
Query: 331 TNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYE 390
Q T+ LLN +DG A ++ TN ++ LDPAL+R GR+D+ IE + E
Sbjct: 331 V---QRTMLELLNQLDGF--ASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPNEE 385
Query: 391 A 391
A
Sbjct: 386 A 386
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 146 (56.5 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 57/191 (29%), Positives = 95/191 (49%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYD 261
L + E +E+I+ + + D + R+G + +G LLYGPPGTGK+ + A+A+ + +
Sbjct: 147 LGQQIRELREVIELPLL---NPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDAN 203
Query: 262 LYDLELTAVKDNT--ELRKLLIETSSKS------IIVIEDIDCSLDLTGQRRXXXXXXXX 313
+ +A+ D E +L+ E + + II +++ID G RR
Sbjct: 204 FLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDA----IGGRRFSEGTSA- 258
Query: 314 XXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALI 373
+RE Q TL LLN +DG + A G ++I+ TN + LDPAL+
Sbjct: 259 --------------DREI---QRTLMELLNQMDG-FDALGQVKMIM-ATNRPDTLDPALL 299
Query: 374 RKGRMDKHIEL 384
R GR+D+ +E+
Sbjct: 300 RPGRLDRKLEI 310
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 146 (56.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 62/217 (28%), Positives = 102/217 (47%)
Query: 202 LAMEPAEKKEIID-DLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGY 260
LA + E +E+++ LI + + + R+G +G LL+GPPGTGK+ + A+A+ L
Sbjct: 155 LAEQIRELREVVELPLI----NPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDC 210
Query: 261 DLYDLELTAVKDNT--ELRKLLIETSS-----KSIIVIEDIDCSLDLTGQRRXXXXXXXX 313
+ + +A+ D E +++ E + + IV D +D G RR
Sbjct: 211 NFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMD---EIDAIGGRRFSEGTSA- 266
Query: 314 XXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALI 373
+RE Q TL LLN +DG S G+ ++ TN + LDPAL+
Sbjct: 267 --------------DREI---QRTLMELLNQLDGFDSL--GKVKVIMATNRPDTLDPALL 307
Query: 374 RKGRMDKHIELSHCSYEAFKVLAKNYLN-IESHNLFD 409
R GR+D+ IE+ + ++ + K + N I H D
Sbjct: 308 RPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEID 344
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 146 (56.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 62/217 (28%), Positives = 102/217 (47%)
Query: 202 LAMEPAEKKEIID-DLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGY 260
LA + E +E+++ LI + + + R+G +G LL+GPPGTGK+ + A+A+ L
Sbjct: 155 LAEQIRELREVVELPLI----NPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDC 210
Query: 261 DLYDLELTAVKDNT--ELRKLLIETSS-----KSIIVIEDIDCSLDLTGQRRXXXXXXXX 313
+ + +A+ D E +++ E + + IV D +D G RR
Sbjct: 211 NFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMD---EIDAIGGRRFSEGTSA- 266
Query: 314 XXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALI 373
+RE Q TL LLN +DG S G+ ++ TN + LDPAL+
Sbjct: 267 --------------DREI---QRTLMELLNQLDGFDSL--GKVKVIMATNRPDTLDPALL 307
Query: 374 RKGRMDKHIELSHCSYEAFKVLAKNYLN-IESHNLFD 409
R GR+D+ IE+ + ++ + K + N I H D
Sbjct: 308 RPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEID 344
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 146 (56.5 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 57/190 (30%), Positives = 88/190 (46%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMI---AAMANLLGYDLYDLE 266
+E+++ ++ ++ + ++G +G LLYGPPGTGK+ M AA N L +
Sbjct: 180 QELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 239
Query: 267 LTA--VKDNTELRK---LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
L + D +L + LL + S II I++ID G +R
Sbjct: 240 LVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDA----IGTKRFDSEVSG--------- 286
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+RE Q T+ LLN +DG S ++ TN + LDPAL+R GR+D+
Sbjct: 287 ------DREV---QRTMLELLNQLDGFSS--DDRIKVIAATNRADILDPALMRSGRLDRK 335
Query: 382 IELSHCSYEA 391
IE H + EA
Sbjct: 336 IEFPHPTEEA 345
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 108 (43.1 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 324 LGKEERETNNSQ--VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+GK E +N + TL+ LL +DG G +++ TN IE +DPAL+R GR D+
Sbjct: 256 VGKARGEMSNVERDSTLNQLLTQMDGFEDNSGV--IVIAATNKIELMDPALLRSGRFDRR 313
Query: 382 IELSHCSY-EAFKVLAKNYLNIESHNL-FDKIGE 413
I LS + + K+L + Y+ +++N+ +KI +
Sbjct: 314 IFLSLPDFKDRLKIL-EIYMKDKNNNINLNKIAK 346
Score = 85 (35.0 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 28/106 (26%), Positives = 49/106 (46%)
Query: 198 TFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANL 257
TF +A K E+ +L+ F ++ Y G +G L+ GPPG GK+ + A+A
Sbjct: 150 TFNDVAGVDEVKMEL-SELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGE 208
Query: 258 LGYDLYD------LELTAVKDNTELRKLLIETS--SKSIIVIEDID 295
G + +E+ +R+L + + SI+ I++ID
Sbjct: 209 AGVPFFYQSGSSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEID 254
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 147 (56.8 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 55/191 (28%), Positives = 89/191 (46%)
Query: 198 TFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANL 257
TF+ +A E KE ++++I F K + ++G +G LL GPPGTGK+ + A+A
Sbjct: 151 TFEDVAGVD-EAKEELEEIIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAGE 209
Query: 258 LGYDLYDL------ELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXX 311
G + + E+ + +R L ++ + +I ID +D G+ R
Sbjct: 210 AGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIF-ID-EIDAVGRHRGAGLGG 267
Query: 312 XXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPA 371
G +ERE TL+ LL +DG S G +++ TN + LDPA
Sbjct: 268 -------------GHDEREQ-----TLNQLLVEMDGFESNEGV--ILIAATNRPDVLDPA 307
Query: 372 LIRKGRMDKHI 382
L+R GR D+ +
Sbjct: 308 LLRPGRFDRQV 318
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 147 (56.8 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 56/181 (30%), Positives = 85/181 (46%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL-- 265
E KE + +++ F K+ Y +G +G LL+G PGTGK+ + A+A G + +
Sbjct: 165 EVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGEAGVPFFSISG 224
Query: 266 ----ELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
E+ + +R L E + K+ I ID +D G++R
Sbjct: 225 SDFVEMFVGVGASRVRDLF-EQAKKNAPCIVFID-EIDAVGRQRGAGLGG---------- 272
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
G +ERE TL+ LL +DG S G +I+ TN + LDPAL+R GR D+H
Sbjct: 273 ---GHDEREQ-----TLNQLLVEMDGFNSNEG--IIIIAATNRPDILDPALLRPGRFDRH 322
Query: 382 I 382
I
Sbjct: 323 I 323
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 147 (56.8 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 56/181 (30%), Positives = 85/181 (46%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL-- 265
E KE + +++ F K+ Y +G +G LL+G PGTGK+ + A+A G + +
Sbjct: 165 EVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGEAGVPFFSISG 224
Query: 266 ----ELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
E+ + +R L E + K+ I ID +D G++R
Sbjct: 225 SDFVEMFVGVGASRVRDLF-EQAKKNAPCIVFID-EIDAVGRQRGAGLGG---------- 272
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
G +ERE TL+ LL +DG S G +I+ TN + LDPAL+R GR D+H
Sbjct: 273 ---GHDEREQ-----TLNQLLVEMDGFNSNEG--IIIIAATNRPDILDPALLRPGRFDRH 322
Query: 382 I 382
I
Sbjct: 323 I 323
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 145 (56.1 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 55/189 (29%), Positives = 88/189 (46%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTA 269
+E+I+ ++ K D + +G +G L+YGPPGTGK+ + A A G L+L A
Sbjct: 210 EELIEAVVLPMKQADKFKNLGIKPPKGALMYGPPGTGKTLLARACAAQSGATF--LKLAA 267
Query: 270 VKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKE-E 328
+L ++ I +K ++ D + L ++ R K +
Sbjct: 268 ----PQLVQMFIGDGAK---LVRD---AFALAKEKAPTIIFIDELDAIGTKRFDSDKSGD 317
Query: 329 RETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCS 388
RE Q T+ LLN +DG S ++ TN ++ LDPAL+R GR+D+ IE S
Sbjct: 318 REV---QRTMLELLNQLDGFGS--DDRVKVLAATNRVDTLDPALLRSGRLDRKIEFPLPS 372
Query: 389 YEAFKVLAK 397
EA + + K
Sbjct: 373 EEARESVLK 381
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 144 (55.7 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 69/247 (27%), Positives = 111/247 (44%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNT--ELRKLLI 281
+ + R+G +G LLYGPPGTGK+ + A+A+ + + + +A+ D E +L+
Sbjct: 164 ELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIR 223
Query: 282 ET-----SSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQV 336
E + I+ D +D G RR +RE Q
Sbjct: 224 EMFGYARDHQPCIIFMD---EIDAIGGRRFSEGTSA---------------DREI---QR 262
Query: 337 TLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA-FKVL 395
TL LLN +DG + G ++I+ TN + LDPAL+R GR+D+ IE+ + +A +VL
Sbjct: 263 TLMELLNQLDG-FDELGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQARMEVL 320
Query: 396 AKNYLNIESHNLFD-----KIGELLGEAKM----TPADVAEHLMPKTFPADVEF--SLRS 444
+ I H D K+ E A + T A +A + + +F ++R
Sbjct: 321 KIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVVHEDFMKAVRK 380
Query: 445 LNQALEL 451
LN A +L
Sbjct: 381 LNDAKKL 387
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 143 (55.4 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 55/184 (29%), Positives = 87/184 (47%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLEL 267
E +E+I+ + K+ + + R+G +G LLYGPPGTGK+ + A+A+ + + +
Sbjct: 148 ELREVIELPL---KNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVS 204
Query: 268 TAVKDNT--ELRKLLIET-----SSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXP 320
+A+ D E +L+ E + I+ D +D G RR
Sbjct: 205 SAIVDKYIGESARLIREMFGYAKEHEPCIIFMD---EIDAIGGRRFSEGTSA-------- 253
Query: 321 RQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDK 380
+RE Q TL LLN +DG G+ I+ TN + LDPAL+R GR+D+
Sbjct: 254 -------DREI---QRTLMELLNQLDGFDYL--GKTKIIMATNRPDTLDPALLRAGRLDR 301
Query: 381 HIEL 384
IE+
Sbjct: 302 KIEI 305
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 99 (39.9 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 35/136 (25%), Positives = 63/136 (46%)
Query: 337 TLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLA 396
T++ LL+ +DG G +++ TN + LD AL+R GR D + +S + K +
Sbjct: 420 TINQLLSEMDGFHQNAGV--IVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEIL 477
Query: 397 KNYLNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLNQALELAKEEA 456
YL H+ D G + T AD+ + A ++ + + LE A+++
Sbjct: 478 SLYLTKILHDEIDLDMLARGTSGFTGADLENMINQAALRAAIDGAETVSMKHLETARDKV 537
Query: 457 -----RRVKVDDKEAN 467
R+ ++ D+EAN
Sbjct: 538 LMGPERKARLPDEEAN 553
Score = 96 (38.9 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMA 255
E K+ + +++ F KS + ++ +G +G LL GPPGTGK+ + A+A
Sbjct: 307 EAKQELKEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVA 354
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 146 (56.5 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 53/185 (28%), Positives = 90/185 (48%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL-- 265
E KE +++++ F ++ ++R+G +G LL GPPGTGK+ + A+A G + +
Sbjct: 163 EAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISG 222
Query: 266 ----ELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
E+ + +R + E + K+ I ID +D G+ R
Sbjct: 223 SDFVEMFVGVGASRVRDMF-EQAKKNAPCIVFID-EIDAVGRHRGAGYGG---------- 270
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
G +ERE TL+ LL +DG + A G +I+ TN + LDPAL+R GR D++
Sbjct: 271 ---GNDEREQ-----TLNQLLVEMDG-FEANEGV-IILAATNRKDVLDPALLRPGRFDRN 320
Query: 382 IELSH 386
+ + +
Sbjct: 321 VTVGN 325
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 146 (56.5 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 53/185 (28%), Positives = 90/185 (48%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL-- 265
E KE +++++ F ++ ++R+G +G LL GPPGTGK+ + A+A G + +
Sbjct: 163 EAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISG 222
Query: 266 ----ELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
E+ + +R + E + K+ I ID +D G+ R
Sbjct: 223 SDFVEMFVGVGASRVRDMF-EQAKKNAPCIVFID-EIDAVGRHRGAGYGG---------- 270
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
G +ERE TL+ LL +DG + A G +I+ TN + LDPAL+R GR D++
Sbjct: 271 ---GNDEREQ-----TLNQLLVEMDG-FEANEGV-IILAATNRKDVLDPALLRPGRFDRN 320
Query: 382 IELSH 386
+ + +
Sbjct: 321 VTVGN 325
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 143 (55.4 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 56/168 (33%), Positives = 81/168 (48%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTEL-R 277
++Y +G +G +LYG PGTGK+ + A+AN + EL + D +L R
Sbjct: 209 EYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268
Query: 278 KL--LIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
+L + E + SI+ I++ID G +R ERE Q
Sbjct: 269 ELFRVAEEHAPSIVFIDEIDA----IGTKRYDSNSGG---------------EREI---Q 306
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
T+ LLN +DG S G+ ++ TN IE LDPALIR GR+D+ IE
Sbjct: 307 RTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIE 352
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 143 (55.4 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 56/168 (33%), Positives = 81/168 (48%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTEL-R 277
++Y +G +G +LYG PGTGK+ + A+AN + EL + D +L R
Sbjct: 209 EYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268
Query: 278 KL--LIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
+L + E + SI+ I++ID G +R ERE Q
Sbjct: 269 ELFRVAEEHAPSIVFIDEIDA----IGTKRYDSNSGG---------------EREI---Q 306
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
T+ LLN +DG S G+ ++ TN IE LDPALIR GR+D+ IE
Sbjct: 307 RTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIE 352
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 143 (55.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 56/169 (33%), Positives = 82/169 (48%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN--------LLGYDLYDLEL-TAVKDNT 274
++Y +G +G +LYG PGTGK+ + A+AN ++G +L L K
Sbjct: 212 EYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVR 271
Query: 275 ELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNS 334
EL ++ E ++ SI+ I++ID G +R ERE
Sbjct: 272 ELFRVA-EENAPSIVFIDEIDA----VGTKRYDSNSGG---------------EREI--- 308
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
Q T+ LLN +DG S G+ ++ TN IE LDPALIR GR+D+ IE
Sbjct: 309 QRTMLELLNQLDGFDSR--GDVKVLMATNRIESLDPALIRPGRIDRKIE 355
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 145 (56.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 68/211 (32%), Positives = 96/211 (45%)
Query: 179 KLYTNNGSNWVHVVFEHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYL 238
K+YT + V V F+ A + ME KEI+D L + + RIG +G L
Sbjct: 162 KMYTPSAK--VKVTFDDVAGMENPKME---LKEIVDYL----RDPKKFQRIGGKVPKGVL 212
Query: 239 LYGPPGTGKSTMIAAMANLLGYDLYDLELTA-------VKDNTELRKLLIETSSKSIIVI 291
L GPPGTGK+ + A+A D+ L ++A V + L T+ KS I
Sbjct: 213 LVGPPGTGKTLLARAVAGEA--DVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSI 270
Query: 292 EDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSA 351
ID LD G+ R G +ERE TL+ LL+ +DG S
Sbjct: 271 IFID-ELDAVGRSRGAGLGG-------------GHDEREQ-----TLNQLLSEMDGFDSH 311
Query: 352 CGGERLIVFTTNYIEKLDPALIRKGRMDKHI 382
E +++ TN + LDPAL+R GR D+H+
Sbjct: 312 --DEVIVMAATNRPDVLDPALLRPGRFDRHV 340
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 107 (42.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
L M+ E KE ++ + ++ D Y++IG RG LLYGPPGTGK+ ++ A+AN
Sbjct: 160 LDMQKQEIKEAVE--LPLTQG-DLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 211
Score = 80 (33.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
Q L LLN +DG + ++ TN + LDPAL+R GR+D+ IE
Sbjct: 276 QRILLELLNQMDGFDQTSTVK--VIMATNRADTLDPALLRPGRLDRKIE 322
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 107 (42.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
L M+ E KE ++ + ++ D Y++IG RG LLYGPPGTGK+ ++ A+AN
Sbjct: 160 LDMQKQEIKEAVE--LPLTQG-DLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 211
Score = 80 (33.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
Q L LLN +DG + ++ TN + LDPAL+R GR+D+ IE
Sbjct: 276 QRILLELLNQMDGFDQTSTVK--VIMATNRADTLDPALLRPGRLDRKIE 322
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 97 (39.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 330 ETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSY 389
E N+S ++ LLN +DG+ + L++ TN + +DPAL+R GR+D+ + + ++
Sbjct: 659 EDNSSDRVVAALLNELDGIEAL--RNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNF 716
Query: 390 EAFKVLAK 397
EA K + K
Sbjct: 717 EARKQIVK 724
Score = 97 (39.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 62/246 (25%), Positives = 109/246 (44%)
Query: 64 MRSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIKLWWSSG 123
M +E + I + LS++S T+ ++ N S+ + +D +E++ +K
Sbjct: 156 MATEIFE-INSGLSAQSGTEVGSSQSSPSVNESEPK--ATEDLDELSPGSYKVK-----E 207
Query: 124 KHI-SKSQVFSFYP--ATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRNRMRKL 180
HI S S + + DE R YK T I P L+ + E +R +
Sbjct: 208 IHIRSPSNLIEAISDMSLDEPRIYKFTAASSME--IETPDLLKLPHE-------DRTQSA 258
Query: 181 YTNNGSNWVHVVFEHP---ATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGY 237
Y N GS F+ P TF ++ A+ +I D + ++ + + RG
Sbjct: 259 Y-NQGSEETQN-FDGPPSAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGV 316
Query: 238 LLYGPPGTGKSTMIAAMANLLGYDLYDLELTAV------KDNTELRKLLIETSSK--SII 289
LLYGPPGTGK+ ++ A+A ++ ++ +V + + LRK+ + + SII
Sbjct: 317 LLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSII 376
Query: 290 VIEDID 295
I++ID
Sbjct: 377 FIDEID 382
Score = 80 (33.2 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 36/130 (27%), Positives = 61/130 (46%)
Query: 341 LLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYL 400
LL +DG+ +A G+ +++ TN +D AL R GR++K IE+ A + K L
Sbjct: 403 LLTLLDGMANA--GKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLL 460
Query: 401 NIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLNQALELAKEEAR--- 457
+ + + D +L A T A V L A +LR++ + + L K+ +
Sbjct: 461 SGVPNEIND--AQLEDLASRTHAYVGADLAAVVREA----ALRAIKRTISLQKDTSGLDI 514
Query: 458 --RVKVDDKE 465
V++DD E
Sbjct: 515 FGAVQMDDLE 524
Score = 70 (29.7 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 226 YARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSS 285
++R+G +G LLYGPPG K+ A+A G L AVK EL + S
Sbjct: 574 FSRLGVRPPKGVLLYGPPGCSKTITAKAIATETG-----LNFIAVK-GPELFDKFVGESE 627
Query: 286 KSI 288
+++
Sbjct: 628 RAV 630
>UNIPROTKB|E1C6S3 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 Pfam:PF04212 GO:GO:0008568
GeneTree:ENSGT00570000078874 IPI:IPI00599182 EMBL:AADN02011792
EMBL:AADN02011793 Ensembl:ENSGALT00000017279 ArrayExpress:E1C6S3
Uniprot:E1C6S3
Length = 592
Score = 102 (41.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 37/134 (27%), Positives = 68/134 (50%)
Query: 179 KLYTNNGSNWVHVVFEH-----PAT-FQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRA 232
K++ N SN +++ PA F +A + K+ + + +I S + + + RA
Sbjct: 291 KVFRNVDSNLANLILNEIVDSGPAVKFDDIAGQELAKQALQEIVILPSLRPELFTGL-RA 349
Query: 233 WKRGYLLYGPPGTGKSTM---IAAMANLLGYDLYDLELTA--VKDNTELRKLLIETSSK- 286
RG LL+GPPG GK+ + +AA +N +++ LT+ V + +L + L + +
Sbjct: 350 PARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVAREL 409
Query: 287 --SIIVIEDIDCSL 298
SII I+++D L
Sbjct: 410 QPSIIFIDEVDSLL 423
Score = 88 (36.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 38/126 (30%), Positives = 61/126 (48%)
Query: 341 LLNFIDGLWSACGGERLIVF-TTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNY 399
L+ F DG+ S+ G +R++V TN ++LD A++R R K + +S + E +L KN
Sbjct: 442 LIEF-DGVQSS-GEDRILVMGATNRPQELDDAVLR--RFTKRVYVSLPNEETRLILLKNL 497
Query: 400 LNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLN--QALELAKEEAR 457
L+ + L K EL A+MT L A + +R L Q ++ E R
Sbjct: 498 LSKQGSPLTQK--ELAQLARMTDGYSGSDLTALAKDAALG-PIRELKPEQVKNMSASEMR 554
Query: 458 RVKVDD 463
+K+ D
Sbjct: 555 NIKLSD 560
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 145 (56.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 67/259 (25%), Positives = 122/259 (47%)
Query: 207 AEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN-----LLGYD 261
+E K+ + + + + KS + Y R+G RG LL GPPG GK+ + A+A L +
Sbjct: 347 SEAKQEVKEFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQVPFLSMN 406
Query: 262 LYD-LELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXP 320
+ +E+ +R L E ++ +I ID +D G++R
Sbjct: 407 GSEFIEMIGGLGAARVRDLFKEGKKRAPCIIY-ID-EIDAIGRQRSGT------------ 452
Query: 321 RQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDK 380
+ +G + + S+ TL+ LL +DG+ + G L++ +TN + LD AL+R GR D+
Sbjct: 453 -ESMG--QGSSGESEQTLNQLLVEMDGMATKEGV--LMLASTNRADILDKALLRPGRFDR 507
Query: 381 HIELSHCSY-EAFKVLAKNYLNIESHNLFDKIGELLGEAKMTP----ADVA----EHLMP 431
HI + + E ++ K+ +++ + + L A++TP AD+A E +
Sbjct: 508 HILIDLPTLAERKEIFEKHLSSVKLESPPTTFSQRL--ARLTPGFSGADIANVCNEAALH 565
Query: 432 KTFPADVEFSLRSLNQALE 450
+E S ++L A+E
Sbjct: 566 AARNTQMEVSSKNLEYAVE 584
>UNIPROTKB|F1NCJ3 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001578 "microtubule
bundle formation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0007109 "cytokinesis, completion of separation" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0030496
"midbody" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0034214 "protein hexamerization" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0005768
GO:GO:0051260 Pfam:PF04212 GO:GO:0006888 GO:GO:0030496
GO:GO:0007109 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
GO:GO:0005874 GO:GO:0034214 GeneTree:ENSGT00570000078874
OMA:HKSTPKT EMBL:AADN02011792 EMBL:AADN02011793 IPI:IPI00821045
Ensembl:ENSGALT00000037930 ArrayExpress:F1NCJ3 Uniprot:F1NCJ3
Length = 600
Score = 102 (41.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 37/134 (27%), Positives = 68/134 (50%)
Query: 179 KLYTNNGSNWVHVVFEH-----PAT-FQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRA 232
K++ N SN +++ PA F +A + K+ + + +I S + + + RA
Sbjct: 299 KVFRNVDSNLANLILNEIVDSGPAVKFDDIAGQELAKQALQEIVILPSLRPELFTGL-RA 357
Query: 233 WKRGYLLYGPPGTGKSTM---IAAMANLLGYDLYDLELTA--VKDNTELRKLLIETSSK- 286
RG LL+GPPG GK+ + +AA +N +++ LT+ V + +L + L + +
Sbjct: 358 PARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVAREL 417
Query: 287 --SIIVIEDIDCSL 298
SII I+++D L
Sbjct: 418 QPSIIFIDEVDSLL 431
Score = 88 (36.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 38/126 (30%), Positives = 61/126 (48%)
Query: 341 LLNFIDGLWSACGGERLIVF-TTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNY 399
L+ F DG+ S+ G +R++V TN ++LD A++R R K + +S + E +L KN
Sbjct: 450 LIEF-DGVQSS-GEDRILVMGATNRPQELDDAVLR--RFTKRVYVSLPNEETRLILLKNL 505
Query: 400 LNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLN--QALELAKEEAR 457
L+ + L K EL A+MT L A + +R L Q ++ E R
Sbjct: 506 LSKQGSPLTQK--ELAQLARMTDGYSGSDLTALAKDAALG-PIRELKPEQVKNMSASEMR 562
Query: 458 RVKVDD 463
+K+ D
Sbjct: 563 NIKLSD 568
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 53/196 (27%), Positives = 85/196 (43%)
Query: 190 HVVFEHPA-TFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKS 248
H V + P TF + ++ +E+ + + ++Y +G +G +LYG PGTGK+
Sbjct: 172 HKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKT 231
Query: 249 TMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXX 308
+ A+AN T ++ L+ + S + ++ I + ++
Sbjct: 232 LLAKAVAN-------STSATFIRATGS--DLVQKQSGEGARLVRQI---FQMAKEQAPSI 279
Query: 309 XXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKL 368
R R Q TL LLN +DG S G+ I+ TN I+ L
Sbjct: 280 VFIDEIDAVGTKR--FDTSSRGEQEVQRTLLELLNQLDGFESR--GDVKIIMATNRIDSL 335
Query: 369 DPALIRKGRMDKHIEL 384
DPALIR GR+D+ IEL
Sbjct: 336 DPALIRPGRIDRKIEL 351
>UNIPROTKB|Q5ZK92 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0015630 "microtubule cytoskeleton" evidence=ISS] [GO:0043014
"alpha-tubulin binding" evidence=ISS] [GO:0048487 "beta-tubulin
binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0001578
"microtubule bundle formation" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017 HSSP:O75351
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214 HOGENOM:HOG000225146
KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502
OrthoDB:EOG4NZTTF EMBL:EU849599 EMBL:EU849600 EMBL:AJ720192
IPI:IPI00599182 IPI:IPI00923811 RefSeq:NP_001026232.1
UniGene:Gga.21964 ProteinModelPortal:Q5ZK92 SMR:Q5ZK92
STRING:Q5ZK92 GeneID:421481 KEGG:gga:421481 InParanoid:Q5ZK92
NextBio:20824244 Uniprot:Q5ZK92
Length = 613
Score = 102 (41.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 37/134 (27%), Positives = 68/134 (50%)
Query: 179 KLYTNNGSNWVHVVFEH-----PAT-FQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRA 232
K++ N SN +++ PA F +A + K+ + + +I S + + + RA
Sbjct: 312 KVFRNVDSNLANLILNEIVDSGPAVKFDDIAGQELAKQALQEIVILPSLRPELFTGL-RA 370
Query: 233 WKRGYLLYGPPGTGKSTM---IAAMANLLGYDLYDLELTA--VKDNTELRKLLIETSSK- 286
RG LL+GPPG GK+ + +AA +N +++ LT+ V + +L + L + +
Sbjct: 371 PARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVAREL 430
Query: 287 --SIIVIEDIDCSL 298
SII I+++D L
Sbjct: 431 QPSIIFIDEVDSLL 444
Score = 88 (36.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 38/126 (30%), Positives = 61/126 (48%)
Query: 341 LLNFIDGLWSACGGERLIVF-TTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNY 399
L+ F DG+ S+ G +R++V TN ++LD A++R R K + +S + E +L KN
Sbjct: 463 LIEF-DGVQSS-GEDRILVMGATNRPQELDDAVLR--RFTKRVYVSLPNEETRLILLKNL 518
Query: 400 LNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLN--QALELAKEEAR 457
L+ + L K EL A+MT L A + +R L Q ++ E R
Sbjct: 519 LSKQGSPLTQK--ELAQLARMTDGYSGSDLTALVKDAALG-PIRELKPEQVKNMSASEMR 575
Query: 458 RVKVDD 463
+K+ D
Sbjct: 576 NIKLSD 581
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 143 (55.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 56/195 (28%), Positives = 90/195 (46%)
Query: 194 EHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAA 253
E TF +A K E+ +++ F K+ D Y +G +G LL GPPGTGK+ + A
Sbjct: 244 ETGVTFGDVAGADQAKLEL-QEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARA 302
Query: 254 MANLLGYDLYD------LELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXX 307
+A G + +EL + +R L + SK+ ++ ID +D G++R
Sbjct: 303 VAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVF-ID-EIDAVGRQRGA 360
Query: 308 XXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEK 367
G +ERE T++ LL +DG +S G +++ TN +
Sbjct: 361 GMGG-------------GNDEREQ-----TINQLLTEMDG-FSGNSGV-IVLAATNRPDV 400
Query: 368 LDPALIRKGRMDKHI 382
LD AL+R GR D+ +
Sbjct: 401 LDSALLRPGRFDRQV 415
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 56/168 (33%), Positives = 80/168 (47%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTEL-R 277
+ Y IG +G +LYG PGTGK+ + A+AN + EL + D +L R
Sbjct: 212 ELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVR 271
Query: 278 KL--LIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
+L + + S SI+ I++ID G +R ERE Q
Sbjct: 272 ELFRVADDLSPSIVFIDEIDA----VGTKRYDANSGG---------------EREI---Q 309
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
T+ LLN +DG S G+ ++ TN IE LDPAL+R GR+D+ IE
Sbjct: 310 RTMLELLNQLDGFDSR--GDVKVILATNRIESLDPALLRPGRIDRKIE 355
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 56/168 (33%), Positives = 80/168 (47%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTEL-R 277
+ Y IG +G +LYG PGTGK+ + A+AN + EL + D +L R
Sbjct: 212 ELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVR 271
Query: 278 KL--LIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
+L + + S SI+ I++ID G +R ERE Q
Sbjct: 272 ELFRVADDLSPSIVFIDEIDA----VGTKRYDAHSGG---------------EREI---Q 309
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
T+ LLN +DG S G+ ++ TN IE LDPAL+R GR+D+ IE
Sbjct: 310 RTMLELLNQLDGFDSR--GDVKVILATNRIESLDPALLRPGRIDRKIE 355
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 101 (40.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 202 LAMEPAEKKEIID-DLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
L M+ E +E ++ L F D Y +IG RG LLYGPPGTGK+ ++ A+AN
Sbjct: 171 LDMQKQEIREAVELPLTHF----DLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 222
Score = 83 (34.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
Q L LLN +DG + ++ TN + LDPAL+R GR+D+ IE
Sbjct: 287 QRILLELLNQMDGFEQTSNVK--VIMATNRADTLDPALLRPGRLDRKIE 333
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 141 (54.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 72/286 (25%), Positives = 126/286 (44%)
Query: 198 TFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANL 257
TF +A K+E+ +++ F KS + + +G +G LL GPPGTGK+ + A+A
Sbjct: 157 TFANVAGVDEAKQEV-GEVVEFLKSREKFQALGARIPKGILLIGPPGTGKTLLAKAIAGE 215
Query: 258 LGYDLYDL------ELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXX 311
G + + E+ + +R L + + K+ I ID +D G++R
Sbjct: 216 AGVPFFSISGSEFVEMFVGVGASRVRDLF-DQAKKNAPCIIFID-EIDAVGRQRGAGLGG 273
Query: 312 XXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPA 371
G +ERE TL+ +L +DG + +++ TN + LDPA
Sbjct: 274 -------------GHDEREQ-----TLNQILVEMDGFDTDTSV--IVIAATNRPDILDPA 313
Query: 372 LIRKGRMDKHIELSH---CSYEAF-KVLAKNYLNIESHNLFDKIGELLGEAKMTPADVAE 427
L+R GR D+ + L EA K+ AK ++ NL + + +G + AD+A
Sbjct: 314 LLRPGRFDRRVVLDKPDITGREAILKIHAKGKPLADTVNLENLAKQTVG---FSGADLAN 370
Query: 428 HLMPKTFPA--------DVEFSLRSLNQALELAKEEARRVKVDDKE 465
L A + E S+++ + + ++RR+ +KE
Sbjct: 371 LLNEAAILAARKNRKVVETEDLEESIDRVIAGPERKSRRISTQEKE 416
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 138 (53.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 53/187 (28%), Positives = 85/187 (45%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMI---AAMANLLGYDLYDLE 266
+E+++ ++ ++ + ++G +G LLYGPPGTGK+ M AA N L +
Sbjct: 181 QELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 240
Query: 267 LTA--VKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKL 324
L + D +L + + + + I ID +D G +R
Sbjct: 241 LVQMFIGDGAKLVRDAFQLAKEKAPCIIFID-EIDAIGTKRFDSEVSG------------ 287
Query: 325 GKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
+RE Q T+ LLN +DG S ++ TN + LDPAL+R GR+D+ IE
Sbjct: 288 ---DREV---QRTMLELLNQLDGFSS--DERIKVIAATNRADILDPALMRSGRLDRKIEF 339
Query: 385 SHCSYEA 391
H + EA
Sbjct: 340 PHPTEEA 346
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 140 (54.3 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 55/195 (28%), Positives = 90/195 (46%)
Query: 194 EHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAA 253
E +F +A K E+ +++ F K+ D Y +G +G LL GPPGTGK+ + A
Sbjct: 256 ETGVSFADVAGADQAKLEL-QEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARA 314
Query: 254 MANLLGYDLYD------LELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXX 307
+A G + +EL + +R L + SK+ ++ ID +D G++R
Sbjct: 315 VAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVF-ID-EIDAVGRQRGA 372
Query: 308 XXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEK 367
G +ERE T++ LL +DG +S G +++ TN +
Sbjct: 373 GMGG-------------GNDEREQ-----TINQLLTEMDG-FSGNSGV-IVLAATNRPDV 412
Query: 368 LDPALIRKGRMDKHI 382
LD AL+R GR D+ +
Sbjct: 413 LDSALLRPGRFDRQV 427
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 137 (53.3 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 62/190 (32%), Positives = 90/190 (47%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYD 261
L + E KE I+ + + E Y IG +G +LYG PGTGK+ + A+AN
Sbjct: 189 LEAQVQEMKEAIE--LPLTHPE-LYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSAT 245
Query: 262 LYDL---ELTA--VKDNTEL-RKL--LIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXX 313
+ EL + D +L R+L + + + SI+ I++ID G +R
Sbjct: 246 FLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDA----VGTKRYDS----- 296
Query: 314 XXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALI 373
Q G ERE Q T+ LLN +DG + + ++ TN IE LDPALI
Sbjct: 297 --------QSGG--EREI---QRTMLELLNQLDGFDARTDVK--VIMATNRIETLDPALI 341
Query: 374 RKGRMDKHIE 383
R GR+D+ IE
Sbjct: 342 RPGRIDRKIE 351
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 101 (40.6 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 29/96 (30%), Positives = 50/96 (52%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL-- 265
E K+ + +L+ F + + ++ +G +G LL GPPGTGK+ + A+A G + +
Sbjct: 322 EAKDELQELVEFLLNPERFSSLGGKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFYMSG 381
Query: 266 -ELTAVKDNT---ELRKLLIETSSKS--IIVIEDID 295
E V +R+L + SKS II I+++D
Sbjct: 382 SEFDEVYVGVGAKRVRELFNQARSKSPAIIFIDELD 417
Score = 87 (35.7 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 326 KEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHI 382
+ ER+ + TL+ LL +DG + G +I+ TNY E LD AL R GR D+ +
Sbjct: 423 RNERDAAYVKQTLNQLLTELDGFSQSTGV--IILAATNYPELLDKALTRPGRFDRKV 477
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 136 (52.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 59/204 (28%), Positives = 97/204 (47%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNT--ELRKLLI 281
+ + R+G +G LLYGPPGTGK+ + A+A+ + + + +A+ D E +L+
Sbjct: 163 ELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIR 222
Query: 282 ETSSKS------IIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
E + + II +++ID G RR +RE Q
Sbjct: 223 EMFNYAREHQPCIIFMDEIDA----IGGRRFSEGTSA---------------DREI---Q 260
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA-FKV 394
TL LLN +DG + G ++I+ TN + LDPAL+R GR+D+ IE+ + ++ ++
Sbjct: 261 RTLMELLNQLDG-FDQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEI 318
Query: 395 LAKNYLNIESHNLFD-----KIGE 413
L + I H D K+GE
Sbjct: 319 LKIHASGIAKHGEIDYEAIVKLGE 342
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 93 (37.8 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 328 ERETNNSQV--TLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELS 385
E E +S+V T+ LLN +DG S + ++ TN I+ LD AL+R GR+D+ IE
Sbjct: 290 EGEHGDSEVQRTMMELLNQLDGFESTQNIK--VIMCTNRIDILDEALLRPGRIDRKIEFP 347
Query: 386 HCSYEA 391
+ + EA
Sbjct: 348 NPNVEA 353
Score = 89 (36.4 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
L + E KE+I+ + K + + +G + +G LLYGPPGTGK+ + A+A+
Sbjct: 184 LDQQVKEVKEVIELPV---KHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAH 235
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 93 (37.8 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 328 ERETNNSQV--TLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELS 385
E E +S+V T+ LLN +DG S + ++ TN I+ LD AL+R GR+D+ IE
Sbjct: 290 EGEHGDSEVQRTMMELLNQLDGFESTQNIK--VIMCTNRIDILDEALLRPGRIDRKIEFP 347
Query: 386 HCSYEA 391
+ + EA
Sbjct: 348 NPNVEA 353
Score = 89 (36.4 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
L + E KE+I+ + K + + +G + +G LLYGPPGTGK+ + A+A+
Sbjct: 184 LDQQVKEVKEVIELPV---KHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAH 235
>GENEDB_PFALCIPARUM|PFC0140c [details] [associations]
symbol:PFC0140c "N-ethylmaleimide-sensitive
fusion protein, putative" species:5833 "Plasmodium falciparum"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016887 HSSP:Q01853
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 EMBL:AL844502 KO:K06027
HOGENOM:HOG000198544 PIR:T18421 RefSeq:XP_001351105.1
ProteinModelPortal:O77313 EnsemblProtists:PFC0140c:mRNA
GeneID:814347 KEGG:pfa:PFC0140c EuPathDB:PlasmoDB:PF3D7_0303000
OMA:ESAHECE ProtClustDB:CLSZ2432490 Uniprot:O77313
Length = 783
Score = 140 (54.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 53/190 (27%), Positives = 85/190 (44%)
Query: 235 RGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVIEDI 294
+G +LYGPPGTGK T+IA +G L E + L K + ++ + +D
Sbjct: 288 KGMILYGPPGTGK-TLIARQ---IGKTLNAREPKIINGPEILNKYVGQSEENIRNLFKDA 343
Query: 295 DCSLDLTGQRRXXXXXXXXXXXXX-XPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACG 353
+ +G+ R +G N+S V + LL+ IDG+ S
Sbjct: 344 EMEYKQSGENSLLHIIILDEIDAICRQRGNVGSSSTGVNDSVV--NQLLSKIDGVNSL-- 399
Query: 354 GERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA-FKVLAKNYLNIESHNLFDKIG 412
L++ TN I+ +D AL+R GR + HIE+S + E ++L + N+ N
Sbjct: 400 NNILLIGMTNRIDLIDEALLRPGRFELHIEISLPNKEGRIQILNIHTKNMRMSNKLSSDV 459
Query: 413 ELLGEAKMTP 422
+L A+ TP
Sbjct: 460 NILELAERTP 469
>UNIPROTKB|O77313 [details] [associations]
symbol:PFC0140c "N-ethylmaleimide sensitive fusion protein,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016887 HSSP:Q01853 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
EMBL:AL844502 KO:K06027 HOGENOM:HOG000198544 PIR:T18421
RefSeq:XP_001351105.1 ProteinModelPortal:O77313
EnsemblProtists:PFC0140c:mRNA GeneID:814347 KEGG:pfa:PFC0140c
EuPathDB:PlasmoDB:PF3D7_0303000 OMA:ESAHECE ProtClustDB:CLSZ2432490
Uniprot:O77313
Length = 783
Score = 140 (54.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 53/190 (27%), Positives = 85/190 (44%)
Query: 235 RGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVIEDI 294
+G +LYGPPGTGK T+IA +G L E + L K + ++ + +D
Sbjct: 288 KGMILYGPPGTGK-TLIARQ---IGKTLNAREPKIINGPEILNKYVGQSEENIRNLFKDA 343
Query: 295 DCSLDLTGQRRXXXXXXXXXXXXX-XPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACG 353
+ +G+ R +G N+S V + LL+ IDG+ S
Sbjct: 344 EMEYKQSGENSLLHIIILDEIDAICRQRGNVGSSSTGVNDSVV--NQLLSKIDGVNSL-- 399
Query: 354 GERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA-FKVLAKNYLNIESHNLFDKIG 412
L++ TN I+ +D AL+R GR + HIE+S + E ++L + N+ N
Sbjct: 400 NNILLIGMTNRIDLIDEALLRPGRFELHIEISLPNKEGRIQILNIHTKNMRMSNKLSSDV 459
Query: 413 ELLGEAKMTP 422
+L A+ TP
Sbjct: 460 NILELAERTP 469
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 100 (40.3 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
+K+E+ + + D Y +IG RG LLYGPPGTGK+ ++ A+AN
Sbjct: 142 QKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 190
Score = 80 (33.2 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
Q L LL +DG G ++ TN + LDPAL+R GR+D+ IE
Sbjct: 255 QRILIELLTQMDGFDQ--GANVKVIMATNRADTLDPALLRPGRLDRKIE 301
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 136 (52.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 54/190 (28%), Positives = 90/190 (47%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMI---AAMANLLGYDLYDLE 266
+E+++ ++ ++ + +G +G L+YGPPGTGK+ + AA L +
Sbjct: 191 QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 250
Query: 267 LTA--VKDNTELRK---LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
L + D +L + L + + SII I++ LD TG +R
Sbjct: 251 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDE----LDATGTKRFDS------------- 293
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+K G +RE Q T+ LLN +DG + ++ TN ++ LDPAL+R GR+D+
Sbjct: 294 EKAG--DREV---QRTMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDQK 346
Query: 382 IELSHCSYEA 391
IE + EA
Sbjct: 347 IEFPMPNEEA 356
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 136 (52.9 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 54/190 (28%), Positives = 91/190 (47%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMI---AAMANLLGYDLYDLE 266
+E+ + ++ + D + ++G +G L++GPPGTGK+ + AA +N L +
Sbjct: 195 EELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQ 254
Query: 267 LTA--VKDNTELRK---LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
L + D +L + L + S +II I++ LD G +R
Sbjct: 255 LVQMFIGDGAKLVRDAFALAKEKSPAIIFIDE----LDAIGTKRFDS------------- 297
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+K G +RE Q T+ LLN +DG S ++ TN ++ LDPAL+R GR+D+
Sbjct: 298 EKAG--DREV---QRTMLELLNQLDGFSS--DDRVKVIAATNRVDTLDPALLRSGRLDRK 350
Query: 382 IELSHCSYEA 391
+E + EA
Sbjct: 351 LEFPLPNEEA 360
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 138 (53.6 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 55/201 (27%), Positives = 89/201 (44%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL-- 265
E KE + +++ F K + + +G +G LL GPPGTGK+ + A+A G + +
Sbjct: 179 EAKEELQEVVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISG 238
Query: 266 ----ELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
E+ + +R L + + +I ID +D G++R
Sbjct: 239 SEFVEMFVGVGASRVRDLFKKAKENAPCLIF-ID-EIDAVGRQRGAGIGG---------- 286
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
G +ERE TL+ LL +DG G +I+ TN + LD AL+R GR D+
Sbjct: 287 ---GNDEREQ-----TLNQLLTEMDGFEGNTG--IIIIAATNRPDVLDSALMRPGRFDRQ 336
Query: 382 IELSHCSY----EAFKVLAKN 398
+ + Y E +V A+N
Sbjct: 337 VMVDAPDYSGRKEILEVHARN 357
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 135 (52.6 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 66/244 (27%), Positives = 111/244 (45%)
Query: 162 VSVLKEGREIKVRN---RMRKLYTNNGSNWVHVVFEHPATFQTLAMEPAEKKEI--IDDL 216
+ +K + +RN ++ K+ N V ++ T M +K+I I ++
Sbjct: 101 IKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEV 160
Query: 217 IAFS-KSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN-----LLGYDLYDLELTAV 270
I K + + +G +G LLYGPPGTGK+ + A+A+ + +L +
Sbjct: 161 IELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYI 220
Query: 271 KDNTEL-RKLLI--ETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKE 327
+ + + R+L + + SII +++ID S+ G R G
Sbjct: 221 GEGSRMVRELFVMAREHAPSIIFMDEID-SI---GSSRSDSSG--------------GSG 262
Query: 328 ERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHC 387
+ E Q T+ LLN +DG + A ++I+ TN I+ LDPAL+R GR+D+ IE
Sbjct: 263 DSEV---QRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDPALLRPGRIDRKIEFPPP 317
Query: 388 SYEA 391
S EA
Sbjct: 318 SAEA 321
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 135 (52.6 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 58/212 (27%), Positives = 97/212 (45%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLEL 267
E KE+I+ + K + + +G A +G LLYGPPGTGK+ + A+A + E
Sbjct: 159 EIKEVIELPV---KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA-------HHTEC 208
Query: 268 TAVK-DNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGK 326
T ++ +EL + I S+ ++ ++ R ++
Sbjct: 209 TFIRVSGSELVQKFIGEGSR---MVREL-----FVMAREHAPSIIFMDEIDSIGSSRIES 260
Query: 327 EERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSH 386
+ Q T+ LLN +DG + A ++I+ TN I+ LDPAL+R GR+D+ IE
Sbjct: 261 GSGGDSEVQRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDPALLRPGRIDRKIEFPP 318
Query: 387 CSYEAFKVLAKNY---LNIESHNLFDKIGELL 415
+ EA + K + +N+ KI EL+
Sbjct: 319 PNEEARLDILKIHSRKMNLTRGINLRKIAELM 350
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 139 (54.0 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 66/234 (28%), Positives = 103/234 (44%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL-- 265
E KE I + ++F K Y ++G RG +L GPPGTGK+ + A A G Y +
Sbjct: 355 EAKEEIMEFVSFLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSG 414
Query: 266 ----ELTAVKDNTELRKLL--IETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXX 319
E+ +R L ++ SI+ I++ID G+ R
Sbjct: 415 SEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDA----IGKARQKGNFSGA------ 464
Query: 320 PRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFT-TNYIEKLDPALIRKGRM 378
+ERE TL+ +L +DG A + ++V TN + LD AL+R GR
Sbjct: 465 ------NDEREN-----TLNQMLVEMDGFTPA---DHVVVLAGTNRPDILDKALLRPGRF 510
Query: 379 DKHIELSHCSYEAFKVLAKNYLN-IE-SHNLFDKIGELLGEAKMTP----ADVA 426
D+HI + E K + +L+ ++ + +FD L A +TP AD+A
Sbjct: 511 DRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRL---AALTPGFSGADIA 561
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 135 (52.6 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 52/185 (28%), Positives = 88/185 (47%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLEL 267
E +E+I+ + K+ + + R+G +G LLYGPPGTGK+ + A+A +G +
Sbjct: 192 ELREVIELPL---KNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPA 248
Query: 268 TAVKDNT--ELRKLLIETSSKS------IIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXX 319
+ + D E +++ E + + II ++++D G RR
Sbjct: 249 SGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDA----IGGRRFSEGTSA------- 297
Query: 320 PRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMD 379
+RE Q TL LL +DG + G+ I+ TN + LDPAL+R GR+D
Sbjct: 298 --------DREI---QRTLMELLTQMDGFDNL--GQTKIIMATNRPDTLDPALLRPGRLD 344
Query: 380 KHIEL 384
+ +E+
Sbjct: 345 RKVEI 349
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 135 (52.6 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 84/361 (23%), Positives = 154/361 (42%)
Query: 44 VSFFYPYVQITFNEFTGDRFMRSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSM 103
VS ++I NE +++E + E + ++ ++ N +SL L
Sbjct: 29 VSLIDTEIKILKNEHAR---LKNEYKNLQEKIKDNVEKIHLNKMLPYLVANVVESLDLED 85
Query: 104 DDHE-EVADEFQGIKLWWSSGKHISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPY-- 160
++ E E+ DE+ L+ ++ K +S F DEKR + R I P
Sbjct: 86 EEEENEIKDEYD---LYDNNLK-LSHE---GFRDIDDEKRGKCMVIKTSTRQTIFLPVPG 138
Query: 161 LV--SVLKEGREIKVR-------NRMRKLYTNNGSNWVHVVFEHPAT-FQTLAMEPAEKK 210
L+ S LK G + V +++ + Y N V E P+ + + + +
Sbjct: 139 LIDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVK--AMEVIEKPSEDYSDIGGLDKQIE 196
Query: 211 EIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAV 270
++++ ++ ++ + +IG +G L++GPPGTGK+ + A A+ L+L
Sbjct: 197 DLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATF--LKLAG- 253
Query: 271 KDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERE 330
+L ++ I +K ++ D + +L ++ R E
Sbjct: 254 ---PQLVQMFIGDGAK---MVRD---AFNLAKEKAPAIIFIDELDAIGTKR--FDSELSG 302
Query: 331 TNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYE 390
Q T+ LLN +DG +S ++I TN + LDPAL+R GR+D+ IEL H + E
Sbjct: 303 DREVQRTMLELLNQLDG-FSTDDTVKVIA-ATNRPDTLDPALLRSGRLDRKIELPHPNEE 360
Query: 391 A 391
+
Sbjct: 361 S 361
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 135 (52.6 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 84/361 (23%), Positives = 154/361 (42%)
Query: 44 VSFFYPYVQITFNEFTGDRFMRSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSM 103
VS ++I NE +++E + E + ++ ++ N +SL L
Sbjct: 29 VSLIDTEIKILKNEHAR---LKNEYKNLQEKIKDNVEKIHLNKMLPYLVANVVESLDLED 85
Query: 104 DDHE-EVADEFQGIKLWWSSGKHISKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPY-- 160
++ E E+ DE+ L+ ++ K +S F DEKR + R I P
Sbjct: 86 EEEENEIKDEYD---LYDNNLK-LSHE---GFRDIDDEKRGKCMVIKTSTRQTIFLPVPG 138
Query: 161 LV--SVLKEGREIKVR-------NRMRKLYTNNGSNWVHVVFEHPAT-FQTLAMEPAEKK 210
L+ S LK G + V +++ + Y N V E P+ + + + +
Sbjct: 139 LIDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVK--AMEVIEKPSEDYSDIGGLDKQIE 196
Query: 211 EIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAV 270
++++ ++ ++ + +IG +G L++GPPGTGK+ + A A+ L+L
Sbjct: 197 DLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATF--LKLAG- 253
Query: 271 KDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERE 330
+L ++ I +K ++ D + +L ++ R E
Sbjct: 254 ---PQLVQMFIGDGAK---MVRD---AFNLAKEKAPAIIFIDELDAIGTKR--FDSELSG 302
Query: 331 TNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYE 390
Q T+ LLN +DG +S ++I TN + LDPAL+R GR+D+ IEL H + E
Sbjct: 303 DREVQRTMLELLNQLDG-FSTDDTVKVIA-ATNRPDTLDPALLRSGRLDRKIELPHPNEE 360
Query: 391 A 391
+
Sbjct: 361 S 361
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 102 (41.0 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 194 EHP-ATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIA 252
E P T+ + +K+EI + + D Y +IG RG LLYGPPGTGK+ ++
Sbjct: 165 EKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVK 224
Query: 253 AMAN 256
A+AN
Sbjct: 225 AVAN 228
Score = 77 (32.2 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
Q L LL +DG + + ++ TN + LDPAL+R GR+D+ IE
Sbjct: 293 QRILIELLTQMDGFDQSTNVK--VIMATNRADTLDPALLRPGRLDRKIE 339
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 95 (38.5 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 32/131 (24%), Positives = 66/131 (50%)
Query: 326 KEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELS 385
+ ++ ++TL+ +L +DG G ++V TN+ E LD AL+R GR D+HI +
Sbjct: 335 RNPKDQQYMKMTLNQMLVELDGFKQNEG--IIVVAATNFPESLDKALVRPGRFDRHIVVP 392
Query: 386 HCSYEAFKVLAKNYLN--IESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLR 443
+ E + + +++++ +++ ++ D + G + AD+A + A ++ S
Sbjct: 393 NPDVEGRRQILESHMSKVLKAEDV-DLMIIARGTPGFSGADLANLVNVAALKAAMDGSKD 451
Query: 444 SLNQALELAKE 454
LE AK+
Sbjct: 452 VTMSDLEFAKD 462
Score = 90 (36.7 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLY 263
E K +++++ + + + R+G +G LL GPPGTGK+ + A+A G +
Sbjct: 234 EAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFF 289
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 138 (53.6 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 51/189 (26%), Positives = 89/189 (47%)
Query: 207 AEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL- 265
AE K+ + + + F ++ + Y ++G RG +L GPPGTGK+ + A A G Y +
Sbjct: 379 AEAKQEVMEFVKFLQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYSVS 438
Query: 266 -----ELTAVKDNTELRKLL--IETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXX 318
E+ + +R L ++ SI+ +++ID G++R
Sbjct: 439 GSEFVEMFVGVGASRVRDLFKTARENAPSIVFVDEIDA----IGKQRSKGNATGA----- 489
Query: 319 XPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFT-TNYIEKLDPALIRKGR 377
+ERET TL+ LL +DG ++ + ++V TN + LD AL+R GR
Sbjct: 490 -------NDERET-----TLNQLLVEMDGFDTS---DHVVVLAGTNRPDILDRALMRPGR 534
Query: 378 MDKHIELSH 386
D+H+ + +
Sbjct: 535 FDRHVHIDN 543
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 52/184 (28%), Positives = 88/184 (47%)
Query: 207 AEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMA--NLLGY-DLY 263
+E K I + + + K+ + ++G RG LL GPPG GK+ + A+A + + + +
Sbjct: 291 SEAKVEIREFVDYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAESTVPFISMN 350
Query: 264 DLELTAVKDN---TELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXP 320
E V + +R L E S++ +I ID +D G++R
Sbjct: 351 GSEFVEVIGGLGASRIRGLFKEARSRAPCIIY-ID-EIDAIGRKRSEGAGAGGGFGGGS- 407
Query: 321 RQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDK 380
G+EE+ TL+ LL +DG+ S G +++ +TN + LD AL+R GR D+
Sbjct: 408 ----GEEEQ-------TLNQLLVEMDGMGS--GNGVVVLASTNRADVLDKALLRPGRFDR 454
Query: 381 HIEL 384
HI +
Sbjct: 455 HISI 458
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 52/185 (28%), Positives = 84/185 (45%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL-- 265
E E + ++ F ++ Y +G +G LLYGPPGTGK+ + A+A G + +
Sbjct: 170 EAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISG 229
Query: 266 ----ELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
E+ + +R L + S +I +D +D G++R
Sbjct: 230 SDFVEMFVGVGASRVRDLFEQAKQNSPCIIF-VD-EIDAVGRQRGAGLGG---------- 277
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
G +ERE TL+ LL +DG G +++ TN + LDPAL+R GR D+
Sbjct: 278 ---GHDEREQ-----TLNQLLVEMDGFGDRAGV--ILIAATNRPDILDPALLRPGRFDRQ 327
Query: 382 IELSH 386
I +S+
Sbjct: 328 IPVSN 332
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 51/181 (28%), Positives = 80/181 (44%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYD--- 264
E KE + +++ F K + Y ++G +G LL GPPGTGK+ + A+A +
Sbjct: 185 EAKEEVKEIVDFLKYPERYIKLGAKIPKGLLLVGPPGTGKTLLAKAVAGEADVPFFSVSG 244
Query: 265 ---LELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
+E+ + +R L E + K I ID +D G+ R
Sbjct: 245 SSFIEMFVGVGASRVRDLF-ENAKKEAPAIVFID-EIDAIGKSRAASGMMG--------- 293
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
G +ERE TL+ LL +DG + +++ TN E LD AL+R GR D+
Sbjct: 294 ---GNDEREQ-----TLNQLLAEMDGFGTE-SSPVIVLAATNRPEVLDAALLRPGRFDRQ 344
Query: 382 I 382
+
Sbjct: 345 V 345
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 51/169 (30%), Positives = 82/169 (48%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNT--ELRKLLI 281
+ + R+G +G LLYGPPGTGK+ + A+A+ + + + +A+ D E +L+
Sbjct: 163 ELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIR 222
Query: 282 ETSSKS------IIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
E + + II +++ID G RR +RE Q
Sbjct: 223 EMFNYAREHQPCIIFMDEIDA----IGGRRFSEGTSA---------------DREI---Q 260
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
TL LLN +DG + G+ ++ TN + LDPAL+R GR+D+ IE+
Sbjct: 261 RTLMELLNQLDGFDNL--GKVKMIMATNRPDVLDPALLRPGRLDRKIEI 307
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 144 (55.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 64/235 (27%), Positives = 104/235 (44%)
Query: 198 TFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANL 257
TF A + K+E+ +++ K+++ + G +G LL+GPPGTGK+ + A+A
Sbjct: 314 TFDDFAGQEYIKREL-QEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 372
Query: 258 LGYDLY-----D-LELTAVKDNTELRKLLIETSS--KSIIVIEDIDCSLDLTGQRRXXXX 309
G + D +E+ + ++ L + S SII I++ID G +R
Sbjct: 373 AGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEIDA----IGSKRGG-- 426
Query: 310 XXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLD 369
P G ERE Q+ L +DG + + L++ TN ++ LD
Sbjct: 427 ----------PDIGGGGAEREQGLLQI-----LTEMDG-FKVTTSQVLVIGATNRLDILD 470
Query: 370 PALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIESHNLFDKIGELLGEAKMTPAD 424
PAL+RKGR DK I + S + + K + + D+ ELL E D
Sbjct: 471 PALLRKGRFDKIIRVGLPSKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTED 525
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 53 ITFNEFTGDRFMRSE 67
+TF++F G +++ E
Sbjct: 313 VTFDDFAGQEYIKRE 327
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 181 YTNNGSNWVHVVFEHPATFQTLAMEPAEKKEII 213
Y+N G + V+ + + L E KKEII
Sbjct: 167 YSNYGQT-ISVILPYYKDGEPLGEEEDSKKEII 198
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 99 (39.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 28/95 (29%), Positives = 48/95 (50%)
Query: 209 KKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL--- 265
K E+++ +++ + Y ++G RG LL GPPGTGK+ + A+A G + +
Sbjct: 343 KDELVE-IVSCLQGSINYKKLGARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSAS 401
Query: 266 ---ELTAVKDNTELRKLL--IETSSKSIIVIEDID 295
EL + +R L +S SII I+++D
Sbjct: 402 EFVELFVGRGAARIRDLFNAARKNSPSIIFIDELD 436
Score = 83 (34.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 43/147 (29%), Positives = 66/147 (44%)
Query: 325 GKEERETNNSQ-VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
GK R N+ + TL+ LL +DG S + +++ TN E LD AL R GR + +
Sbjct: 440 GKRGRSFNDERDQTLNQLLTEMDGFESDT--KVIVIAATNRPEALDSALCRPGRFSRKVL 497
Query: 384 LSHCSYEAF-KVLAKNYLNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSL 442
++ E K+LA + ++ I +L+ A +TP V L A + +
Sbjct: 498 VAEPDQEGRRKILAIHLRDVPLEEDAFLICDLV--ASLTPGFVGADLANIVNEAALLAAR 555
Query: 443 RSLNQ-ALELAKEEARRVK--VDDKEA 466
R A E E R K ++DKEA
Sbjct: 556 RGGEAVAREDIMEAIERAKFGINDKEA 582
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 98 (39.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
N Q T+ L+N +DG G ++ TN + LDPAL+R GR+D+ IE S E
Sbjct: 156 NEVQRTMLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 213
Query: 392 ----FKVLAKNYLNIESHNLFDKIGEL 414
FK+ A++ +++E F+ + L
Sbjct: 214 RTHIFKIHARS-MSVERDIRFELLARL 239
Score = 75 (31.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 205 EPAEK-KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E EK +E+++ + + + +G +G LL+GPPGTGK+ A+AN
Sbjct: 45 EQIEKLREVVETPLLHPER---FVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 94
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 56/198 (28%), Positives = 90/198 (45%)
Query: 192 VFEHPA-TFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTM 250
V E P T+ + + +E+++ ++ K D + +G +G L+YGPPGTGK+ +
Sbjct: 172 VDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLL 231
Query: 251 I---AAMANLLGYDLYDLELTA--VKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRR 305
AA N L +L + + +L + + + I ID LD G +R
Sbjct: 232 ARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFID-ELDAIGTKR 290
Query: 306 XXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYI 365
+K G +RE Q T+ LLN +DG S ++ TN +
Sbjct: 291 FDS-------------EKSG--DREV---QRTMLELLNQLDGFSS--DDRVKVLAATNRV 330
Query: 366 EKLDPALIRKGRMDKHIE 383
+ LDPAL+R GR+D+ IE
Sbjct: 331 DVLDPALLRSGRLDRKIE 348
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 59/235 (25%), Positives = 107/235 (45%)
Query: 196 PATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMA 255
P F+ +A K E+++ ++ F K+ + Y +G +G LL GPPG+GK+ + A+A
Sbjct: 145 PIRFEEIAGIDESKLELLE-VVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVA 203
Query: 256 NLLGYD-LYD-----LELTAVKDNTELRKLLIETSS--KSIIVIEDIDCSLDLTGQRRXX 307
+Y +E+ + +R+L S SI+ I++ID + G+R
Sbjct: 204 TEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDA---IGGKRSSG 260
Query: 308 XXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEK 367
G +RE + TL+ LL +DG + +++ TN I+
Sbjct: 261 SVN--------------GAGQREHDQ---TLNQLLVEMDGFSNTV--HIMVIGATNRIDT 301
Query: 368 LDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIESHNLFDKIGELLGEAKMTP 422
LD AL+R GR D+ + + K + + Y+ +L K+ ++ A++TP
Sbjct: 302 LDSALLRPGRFDRIVYVPLPDINGRKKILEIYIKKIKSDL--KLEDIEKIARLTP 354
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 59/235 (25%), Positives = 107/235 (45%)
Query: 196 PATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMA 255
P F+ +A K E+++ ++ F K+ + Y +G +G LL GPPG+GK+ + A+A
Sbjct: 145 PIRFEEIAGIDESKLELLE-VVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVA 203
Query: 256 NLLGYD-LYD-----LELTAVKDNTELRKLLIETSS--KSIIVIEDIDCSLDLTGQRRXX 307
+Y +E+ + +R+L S SI+ I++ID + G+R
Sbjct: 204 TEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDA---IGGKRSSG 260
Query: 308 XXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEK 367
G +RE + TL+ LL +DG + +++ TN I+
Sbjct: 261 SVN--------------GAGQREHDQ---TLNQLLVEMDGFSNTV--HIMVIGATNRIDT 301
Query: 368 LDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLNIESHNLFDKIGELLGEAKMTP 422
LD AL+R GR D+ + + K + + Y+ +L K+ ++ A++TP
Sbjct: 302 LDSALLRPGRFDRIVYVPLPDINGRKKILEIYIKKIKSDL--KLEDIEKIARLTP 354
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 138 (53.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 55/209 (26%), Positives = 96/209 (45%)
Query: 199 FQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLL 258
F +A K EI++ ++F KS + + ++G RG +L GPPGTGK+ + A A
Sbjct: 401 FSDVAGMDEAKVEIME-FVSFLKSPERFQKLGAKIPRGAILSGPPGTGKTLLAKATAGES 459
Query: 259 GYDLYDL------ELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXX 312
G + + E+ + +R L + +I ID +D G+ R
Sbjct: 460 GVPFFSVSGSEFVEMFVGVGPSRVRDLFANARKNTPCIIF-ID-EIDAIGKSRSAKNFSG 517
Query: 313 XXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFT-TNYIEKLDPA 371
G +ERE+ TL+ +L +DG ++ ++++V TN + LD A
Sbjct: 518 ------------GNDERES-----TLNQILTEMDGFNTS---DQVVVLAGTNRPDVLDKA 557
Query: 372 LIRKGRMDKHIELSHCSYEAFKVLAKNYL 400
L+R GR D+HI + + + K + + +L
Sbjct: 558 LMRPGRFDRHISIDRPTMDGRKQIFRVHL 586
Score = 45 (20.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 379 DKHIELSHCSYEAFKVLAKNYLNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADV 438
D IE+ EA+K ++ L + + ELL + ++ D+ L P+ +P
Sbjct: 790 DIDIEVRRIVNEAYKQ-CRDLLTAKKKEVGLVAEELLAKEVLSRDDMVRLLGPREWPESG 848
Query: 439 EFS 441
EF+
Sbjct: 849 EFA 851
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 79/292 (27%), Positives = 130/292 (44%)
Query: 198 TFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANL 257
+F+ +A K+EI++ + F K+ Y ++G RG +L GPPGTGK+ + A A
Sbjct: 286 SFKNVAGCDEAKQEIME-FVHFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGE 344
Query: 258 LGYDLYDL------ELTAVKDNTELRKLLIETSSK--SIIVIEDIDCSLDLTGQRRXXXX 309
+ E+ + +R L + S SII I++ID G+ R
Sbjct: 345 ANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDA----IGKERGKGG 400
Query: 310 XXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFT-TNYIEKL 368
+ERE TL+ LL +DG ++ ++++V TN + L
Sbjct: 401 ALGGA-----------NDEREA-----TLNQLLVEMDGFTTS---DQVVVLAGTNRPDVL 441
Query: 369 DPALIRKGRMDKHIELS----HCSYEAFKVLAKNYLNIESHNLFDKIGELLGE-AKMTP- 422
D AL+R GR D+HI++ + + + V K LN++ L D + L G+ A +TP
Sbjct: 442 DNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKR-LNLDPL-LTDDMNNLSGKLATLTPG 499
Query: 423 ---ADVAEHLMPKTFPA----DVEFSLRSLNQALE--LAKEEARRVKVDDKE 465
AD+A A D ++ QA+E +A E ++ +V KE
Sbjct: 500 FTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGLE-KKTRVLSKE 550
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 94 (38.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
+K+EI + + + Y +IG RG LLYGPPGTGK+ + A+AN
Sbjct: 163 QKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAN 211
Score = 83 (34.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
Q L LLN +DG + ++ TN + LDPAL+R GR+D+ IE
Sbjct: 276 QRILMELLNQMDGFDQTVNVK--VIMATNRADTLDPALLRPGRLDRKIE 322
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 106 (42.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 328 ERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHC 387
+ T + L+ LLN IDG+ G +IV TN ++DPAL+R GR+D+HI ++
Sbjct: 611 DSSTTAASNVLTSLLNEIDGVEELKGV--VIVGATNKPTEIDPALLRPGRLDRHIYVAPP 668
Query: 388 SYEA-FKVLAK--NYLNIES 404
Y+A ++L K N++S
Sbjct: 669 DYDARLQILQKCSRKFNLQS 688
Score = 77 (32.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 226 YARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
++ G + RG LL+GPPGTGK+ ++ +AN
Sbjct: 255 FSDFGISPPRGILLHGPPGTGKTMLLRCVAN 285
Score = 77 (32.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 23/95 (24%), Positives = 47/95 (49%)
Query: 209 KKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELT 268
K+++I+ + ++ D + +G + +G LLYGPPG K+ A+A G + ++
Sbjct: 508 KRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGP 567
Query: 269 AV------KDNTELRKLL--IETSSKSIIVIEDID 295
+ + +R++ +S SII ++ID
Sbjct: 568 EIFNKYVGESERAIREIFRKARAASPSIIFFDEID 602
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 53/190 (27%), Positives = 89/190 (46%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMI---AAMANLLGYDLYDLE 266
+E+++ ++ ++ + +G +G L+YGPPGTGK+ + AA L +
Sbjct: 161 QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 220
Query: 267 LTA--VKDNTELRK---LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
L + D +L + L + + SII I++ LD G +R
Sbjct: 221 LVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDE----LDAIGNKRFDS------------- 263
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+K G +RE Q T+ LLN +DG + ++ TN ++ LDPAL+R GR+D+
Sbjct: 264 EKAG--DREV---QRTMLELLNQLDGFQPTT--QVKVIAATNRVDILDPALLRSGRLDRK 316
Query: 382 IELSHCSYEA 391
IE + EA
Sbjct: 317 IEFPMPNEEA 326
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 81/331 (24%), Positives = 145/331 (43%)
Query: 70 SAIENYLSSK-SSTQAK-RLKADIIKN-SSQSLVLSMDDHEEVADEFQGIKLWWSSGKHI 126
S I+ Y K T+ K R K + ++ +Q L+ D + DE ++L G ++
Sbjct: 17 SGIKPYFEQKIQETELKIRSKTENVRRLEAQRNALN-DKVRFIKDE---LRLLQEPGSYV 72
Query: 127 SKSQVFSFYPATDEKRYYKLTFHKRHRDLILGPYLVSVLKEGREIKVRN---RMRKLYTN 183
+V +D+K K+ ++ + V LK + + +R+ + K+ N
Sbjct: 73 G--EVIKI--VSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLEN 128
Query: 184 NGSNWVHVVFEHPATFQTLAMEPAEKKEI--IDDLIAFS-KSEDFYARIGRAWKRGYLLY 240
V ++ T M K+I I ++I K + + +G A +G +LY
Sbjct: 129 KADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILY 188
Query: 241 GPPGTGKSTMIAAMAN-----LLGYDLYDLELTAVKDNTEL-RKLLI--ETSSKSIIVIE 292
GPPGTGK+ + A+A+ + +L + + + + R+L + + SII ++
Sbjct: 189 GPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMD 248
Query: 293 DIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSAC 352
+ID S+ G R G + E Q T+ LLN +DG ++
Sbjct: 249 EID-SI---GSTRVEGS---------------GGGDSEV---QRTMLELLNQLDGFETSK 286
Query: 353 GGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
+ I+ TN ++ LDPAL+R GR+D+ IE
Sbjct: 287 NIK--IIMATNRLDILDPALLRPGRIDRKIE 315
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 96 (38.9 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
N Q T+ ++N +DG + A G ++++ TN + LDPAL+R GR+D+ +E E+
Sbjct: 286 NEVQRTMLEIVNQLDG-FDARGNIKVLM-ATNRPDTLDPALLRPGRLDRKVEFGLPDLES 343
Query: 392 ----FKVLAKNYLNIESHNLFDKIGELLGEAKMTPADV 425
FK+ + +N E F+ + L + T AD+
Sbjct: 344 RTQIFKIHTRT-MNCERDIRFELLARLCPNS--TGADI 378
Score = 80 (33.2 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 205 EPAEK-KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E EK +E+++ + E F ++G +G L YGPPGTGK+ + A+AN
Sbjct: 175 EQIEKMREVVE--LPMLHPEKF-VKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
Score = 39 (18.8 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 157 LGPYLVSVLKEGREIK 172
LGPY + K +EIK
Sbjct: 31 LGPYSAPIKKVEKEIK 46
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 51/190 (26%), Positives = 91/190 (47%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLEL 267
E KE+I+ I K + + +G A +G LLYGPPGTGK+ + A+A + +
Sbjct: 172 EIKEVIELPI---KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA-------HHTDC 221
Query: 268 TAVK-DNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGK 326
T ++ +EL + I S+ ++ ++ + + R + G
Sbjct: 222 TFIRVSGSELVQKYIGEGSR---MVREL---FVMAREHAPSIIFMDEIDSIGSARMESGS 275
Query: 327 EERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSH 386
++ Q T+ LLN +DG ++ + ++ TN I+ LD AL+R GR+D+ IE +
Sbjct: 276 GNGDSE-VQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
Query: 387 CSYEA-FKVL 395
+ E+ F +L
Sbjct: 333 PNEESRFDIL 342
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 51/190 (26%), Positives = 91/190 (47%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLEL 267
E KE+I+ I K + + +G A +G LLYGPPGTGK+ + A+A + +
Sbjct: 172 EIKEVIELPI---KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA-------HHTDC 221
Query: 268 TAVK-DNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGK 326
T ++ +EL + I S+ ++ ++ + + R + G
Sbjct: 222 TFIRVSGSELVQKYIGEGSR---MVREL---FVMAREHAPSIIFMDEIDSIGSARMESGS 275
Query: 327 EERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSH 386
++ Q T+ LLN +DG ++ + ++ TN I+ LD AL+R GR+D+ IE +
Sbjct: 276 GNGDSE-VQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
Query: 387 CSYEA-FKVL 395
+ E+ F +L
Sbjct: 333 PNEESRFDIL 342
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 53/190 (27%), Positives = 89/190 (46%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMI---AAMANLLGYDLYDLE 266
+E+++ ++ ++ + +G +G L+YGPPGTGK+ + AA L +
Sbjct: 142 QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 201
Query: 267 LTA--VKDNTELRK---LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
L + D +L + L + + SII I++ LD G +R
Sbjct: 202 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDE----LDAIGTKRFDS------------- 244
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+K G +RE Q T+ LLN +DG + ++ TN ++ LDPAL+R GR+D+
Sbjct: 245 EKAG--DREV---QRTMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRK 297
Query: 382 IELSHCSYEA 391
IE + EA
Sbjct: 298 IEFPMPNEEA 307
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 57/203 (28%), Positives = 94/203 (46%)
Query: 197 ATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
+T+ + + KEI + + K + + +G A +G LLYGPPGTGK+ + A+A+
Sbjct: 129 STYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 188
Query: 257 -----LLGYDLYDLELTAVKDNTEL-RKLLI--ETSSKSIIVIEDIDCSLDLTGQRRXXX 308
+ +L + + + + R+L + + SII +++ID S+ G R
Sbjct: 189 HTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SI---GSSRIDS 244
Query: 309 XXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKL 368
G + E Q T+ LLN +DG + I+ TN ++ L
Sbjct: 245 A---------------GSGDSEV---QRTMLELLNQLDGFEPTKNIK--IIMATNRLDIL 284
Query: 369 DPALIRKGRMDKHIELSHCSYEA 391
DPAL+R GR+D+ IE S EA
Sbjct: 285 DPALLRPGRIDRKIEFPPPSVEA 307
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 53/190 (27%), Positives = 89/190 (46%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMI---AAMANLLGYDLYDLE 266
+E+++ ++ ++ + +G +G L+YGPPGTGK+ + AA L +
Sbjct: 146 QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 205
Query: 267 LTA--VKDNTELRK---LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
L + D +L + L + + SII I++ LD G +R
Sbjct: 206 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDE----LDAIGTKRFDS------------- 248
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+K G +RE Q T+ LLN +DG + ++ TN ++ LDPAL+R GR+D+
Sbjct: 249 EKAG--DREV---QRTMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRK 301
Query: 382 IELSHCSYEA 391
IE + EA
Sbjct: 302 IEFPMPNEEA 311
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 58/193 (30%), Positives = 94/193 (48%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYD 261
L+ + E +E+I+ + + E + R+G +G LLYGPPGTGK+ + A+A+ L +
Sbjct: 138 LSEQIRELREVIE--LPLTNPE-LFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 194
Query: 262 LYDLELTAVKDNT--ELRKLLIETSSKS------IIVIEDIDCSLDLTGQRRXXXXXXXX 313
+ +++ D E +L+ E + + II +++ID G RR
Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA----IGGRRFSEGTSA- 249
Query: 314 XXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALI 373
+RE Q TL LLN +DG + ++I+ TN + LDPAL+
Sbjct: 250 --------------DREI---QRTLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALL 290
Query: 374 RKGRMDK--HIEL 384
R GR+D+ HIEL
Sbjct: 291 RPGRLDRKIHIEL 303
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 136 (52.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 52/185 (28%), Positives = 82/185 (44%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL-- 265
E + + +L+ + K+ D + ++G G LL GPPG GK+ + A+A G Y +
Sbjct: 437 EAVDELQELVKYLKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAG 496
Query: 266 ----ELTAVKDNTELRKLL--IETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXX 319
E+ + +R L + + S+I I++ID RR
Sbjct: 497 SEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDA----LATRRQGIFKENSDQLYNA 552
Query: 320 PRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMD 379
Q ERET TL+ LL +DG + G + + TN + LDPAL+R GR D
Sbjct: 553 ATQ-----ERET-----TLNQLLIELDGFDTGKGV--IFLGATNRRDLLDPALLRPGRFD 600
Query: 380 KHIEL 384
+ I +
Sbjct: 601 RKIRV 605
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 53/190 (27%), Positives = 89/190 (46%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMI---AAMANLLGYDLYDLE 266
+E+++ ++ ++ + +G +G L+YGPPGTGK+ + AA L +
Sbjct: 154 QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 213
Query: 267 LTA--VKDNTELRK---LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
L + D +L + L + + SII I++ LD G +R
Sbjct: 214 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDE----LDAIGTKRFDS------------- 256
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+K G +RE Q T+ LLN +DG + ++ TN ++ LDPAL+R GR+D+
Sbjct: 257 EKAG--DREV---QRTMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRK 309
Query: 382 IELSHCSYEA 391
IE + EA
Sbjct: 310 IEFPMPNEEA 319
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 69/258 (26%), Positives = 116/258 (44%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAV------KDNTELR 277
+ Y+ G RG LLYGPPG GK+T+ A+A L ++ +V + +LR
Sbjct: 217 EIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAPSVVSGMSGESEKKLR 276
Query: 278 KLLIETS--SKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
++ E + +I +++ID +T +R G +RE
Sbjct: 277 EIFEEAKQIAPCLIFMDEIDA---ITPKRD-------------------GGAQREMEKRI 314
Query: 336 VTLSGLLNFIDGLW-SACGGERLIVF-TTNYIEKLDPALIRKGRMDKHIELSHCSYEA-- 391
V + LL +D L GG+ ++V TN + LD AL R GR D+ I L+ + E
Sbjct: 315 V--AQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRI 372
Query: 392 --FKVLAKNYLNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLNQAL 449
K + KN + +E+ F+ EL +K+TP V L A + +++ + + +
Sbjct: 373 SILKAMTKN-IKLENGEHFN-YREL---SKLTPGYVGADLKSLVTAAGIS-AIKRIFETM 426
Query: 450 ELAKEEARRVKVDDKEAN 467
+EE+ VK D +A+
Sbjct: 427 SELQEESHSVKDDSMDAD 444
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 69/258 (26%), Positives = 116/258 (44%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAV------KDNTELR 277
+ Y+ G RG LLYGPPG GK+T+ A+A L ++ +V + +LR
Sbjct: 217 EIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAPSVVSGMSGESEKKLR 276
Query: 278 KLLIETS--SKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
++ E + +I +++ID +T +R G +RE
Sbjct: 277 EIFEEAKQIAPCLIFMDEIDA---ITPKRD-------------------GGAQREMEKRI 314
Query: 336 VTLSGLLNFIDGLW-SACGGERLIVF-TTNYIEKLDPALIRKGRMDKHIELSHCSYEA-- 391
V + LL +D L GG+ ++V TN + LD AL R GR D+ I L+ + E
Sbjct: 315 V--AQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRI 372
Query: 392 --FKVLAKNYLNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLNQAL 449
K + KN + +E+ F+ EL +K+TP V L A + +++ + + +
Sbjct: 373 SILKAMTKN-IKLENGEHFN-YREL---SKLTPGYVGADLKSLVTAAGIS-AIKRIFETM 426
Query: 450 ELAKEEARRVKVDDKEAN 467
+EE+ VK D +A+
Sbjct: 427 SELQEESHSVKDDSMDAD 444
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 91 (37.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E KE+I+ + E F A +G A +G LLYGPPGTGK+ + A+A+
Sbjct: 155 EIKEVIE--LPVKHPEHFEA-LGIAQPKGVLLYGPPGTGKTLLARAVAH 200
Score = 86 (35.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 30/84 (35%), Positives = 46/84 (54%)
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKV 394
Q T+ LLN +DG + A ++I+ TN I+ LD AL+R GR+D+ IE + EA
Sbjct: 264 QRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 321
Query: 395 LAKNY---LNIESHNLFDKIGELL 415
+ K + +N+ KI EL+
Sbjct: 322 ILKIHSRKMNLTRGINLRKIAELM 345
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 134 (52.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 55/186 (29%), Positives = 81/186 (43%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTM---IAAMANL----LGY 260
E KE +++++ F + + R+G RG LL GPPGTGK+ + +A AN+ +
Sbjct: 274 EAKEELEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSG 333
Query: 261 DLYDLELTAVKDNTELRKLLIETSSK--SIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXX 318
+D E+ +R+L + SII I++ LD GQ+R
Sbjct: 334 SQFD-EMYVGVGAKRVRELFAAARKQAPSIIFIDE----LDAIGQKRNARDAAHM----- 383
Query: 319 XPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRM 378
RQ L N V L G D + + TN+ E LDPAL R GR
Sbjct: 384 --RQTL-------NQLLVDLDGFSKNED-----LAHPVVFIGATNFPESLDPALTRPGRF 429
Query: 379 DKHIEL 384
D+HI +
Sbjct: 430 DRHIHV 435
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 53/190 (27%), Positives = 89/190 (46%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMI---AAMANLLGYDLYDLE 266
+E+++ ++ ++ + +G +G L+YGPPGTGK+ + AA L +
Sbjct: 196 QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 255
Query: 267 LTA--VKDNTELRK---LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
L + D +L + L + + SII I++ LD G +R
Sbjct: 256 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDE----LDAIGTKRFDS------------- 298
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+K G +RE Q T+ LLN +DG + ++ TN ++ LDPAL+R GR+D+
Sbjct: 299 EKAG--DREV---QRTMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRK 351
Query: 382 IELSHCSYEA 391
IE + EA
Sbjct: 352 IEFPMPNEEA 361
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 53/190 (27%), Positives = 89/190 (46%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMI---AAMANLLGYDLYDLE 266
+E+++ ++ ++ + +G +G L+YGPPGTGK+ + AA L +
Sbjct: 196 QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 255
Query: 267 LTA--VKDNTELRK---LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
L + D +L + L + + SII I++ LD G +R
Sbjct: 256 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDE----LDAIGTKRFDS------------- 298
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+K G +RE Q T+ LLN +DG + ++ TN ++ LDPAL+R GR+D+
Sbjct: 299 EKAG--DREV---QRTMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRK 351
Query: 382 IELSHCSYEA 391
IE + EA
Sbjct: 352 IEFPMPNEEA 361
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 53/190 (27%), Positives = 89/190 (46%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMI---AAMANLLGYDLYDLE 266
+E+++ ++ ++ + +G +G L+YGPPGTGK+ + AA L +
Sbjct: 196 QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 255
Query: 267 LTA--VKDNTELRK---LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
L + D +L + L + + SII I++ LD G +R
Sbjct: 256 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDE----LDAIGTKRFDS------------- 298
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+K G +RE Q T+ LLN +DG + ++ TN ++ LDPAL+R GR+D+
Sbjct: 299 EKAG--DREV---QRTMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRK 351
Query: 382 IELSHCSYEA 391
IE + EA
Sbjct: 352 IEFPMPNEEA 361
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 53/190 (27%), Positives = 89/190 (46%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMI---AAMANLLGYDLYDLE 266
+E+++ ++ ++ + +G +G L+YGPPGTGK+ + AA L +
Sbjct: 199 QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 258
Query: 267 LTA--VKDNTELRK---LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
L + D +L + L + + SII I++ LD G +R
Sbjct: 259 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDE----LDAIGTKRFDS------------- 301
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+K G +RE Q T+ LLN +DG + ++ TN ++ LDPAL+R GR+D+
Sbjct: 302 EKAG--DREV---QRTMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRK 354
Query: 382 IELSHCSYEA 391
IE + EA
Sbjct: 355 IEFPMPNEEA 364
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 53/190 (27%), Positives = 89/190 (46%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMI---AAMANLLGYDLYDLE 266
+E+++ ++ ++ + +G +G L+YGPPGTGK+ + AA L +
Sbjct: 199 QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 258
Query: 267 LTA--VKDNTELRK---LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
L + D +L + L + + SII I++ LD G +R
Sbjct: 259 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDE----LDAIGTKRFDS------------- 301
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+K G +RE Q T+ LLN +DG + ++ TN ++ LDPAL+R GR+D+
Sbjct: 302 EKAG--DREV---QRTMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRK 354
Query: 382 IELSHCSYEA 391
IE + EA
Sbjct: 355 IEFPMPNEEA 364
>GENEDB_PFALCIPARUM|PF14_0616 [details] [associations]
symbol:PF14_0616 "i-AAA protease, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 95 (38.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 30/103 (29%), Positives = 50/103 (48%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTM---IAAMANLLGYDLYD 264
E K+ ++++I + K+ D + +IG +G LL G PGTGK+ + IA AN+
Sbjct: 261 EVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIAGEANVPFLQASG 320
Query: 265 LELTAVKDNTELRKL--LIETSSKSIIVIEDIDCSLDLTGQRR 305
E + R++ L + + K I ID +D G +R
Sbjct: 321 SEFEEMFVGVGARRIRELFQAAKKHAPCIVFID-EIDAVGSKR 362
Score = 86 (35.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 41/155 (26%), Positives = 70/155 (45%)
Query: 324 LGKEERETNNSQV--TLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+G + +NS V TL+ LL +DG G +++ TN+ + LD AL+R GR+DK
Sbjct: 358 VGSKRSSRDNSAVRMTLNQLLVELDGFEQNEG--IVVICATNFPQSLDKALVRPGRLDKT 415
Query: 382 IELS----HCSYEAFKVLAKNYLNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPAD 437
I + YE K+ + + + +L +G MT AD+ L
Sbjct: 416 IVVPLPDIKGRYEILKMYSNKIVLSKDVDLHVLSRRTVG---MTGADLNNILNIAAIKCS 472
Query: 438 VE----FSLRSLNQALE-LAKEEARRVKVDDKEAN 467
VE + S+ QA + + R+ ++++E N
Sbjct: 473 VEGKKSVDMNSIEQAFDRVVVGLQRKSPLNEEEKN 507
>UNIPROTKB|Q8IKI9 [details] [associations]
symbol:PF14_0616 "ATP-dependent protease la, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 95 (38.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 30/103 (29%), Positives = 50/103 (48%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTM---IAAMANLLGYDLYD 264
E K+ ++++I + K+ D + +IG +G LL G PGTGK+ + IA AN+
Sbjct: 261 EVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIAGEANVPFLQASG 320
Query: 265 LELTAVKDNTELRKL--LIETSSKSIIVIEDIDCSLDLTGQRR 305
E + R++ L + + K I ID +D G +R
Sbjct: 321 SEFEEMFVGVGARRIRELFQAAKKHAPCIVFID-EIDAVGSKR 362
Score = 86 (35.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 41/155 (26%), Positives = 70/155 (45%)
Query: 324 LGKEERETNNSQV--TLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+G + +NS V TL+ LL +DG G +++ TN+ + LD AL+R GR+DK
Sbjct: 358 VGSKRSSRDNSAVRMTLNQLLVELDGFEQNEG--IVVICATNFPQSLDKALVRPGRLDKT 415
Query: 382 IELS----HCSYEAFKVLAKNYLNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPAD 437
I + YE K+ + + + +L +G MT AD+ L
Sbjct: 416 IVVPLPDIKGRYEILKMYSNKIVLSKDVDLHVLSRRTVG---MTGADLNNILNIAAIKCS 472
Query: 438 VE----FSLRSLNQALE-LAKEEARRVKVDDKEAN 467
VE + S+ QA + + R+ ++++E N
Sbjct: 473 VEGKKSVDMNSIEQAFDRVVVGLQRKSPLNEEEKN 507
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 53/190 (27%), Positives = 89/190 (46%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMI---AAMANLLGYDLYDLE 266
+E+++ ++ ++ + +G +G L+YGPPGTGK+ + AA L +
Sbjct: 203 QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 262
Query: 267 LTA--VKDNTELRK---LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
L + D +L + L + + SII I++ LD G +R
Sbjct: 263 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDE----LDAIGTKRFDS------------- 305
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+K G +RE Q T+ LLN +DG + ++ TN ++ LDPAL+R GR+D+
Sbjct: 306 EKAG--DREV---QRTMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRK 358
Query: 382 IELSHCSYEA 391
IE + EA
Sbjct: 359 IEFPMPNEEA 368
>UNIPROTKB|Q05AS3 [details] [associations]
symbol:spast "Spastin" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0001578 "microtubule bundle formation"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0048487 "beta-tubulin binding"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0015630
"microtubule cytoskeleton" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0051301 GO:GO:0051260 GO:GO:0005815 GO:GO:0007049
Pfam:PF04212 eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 EMBL:CR760974
EMBL:BC123973 RefSeq:NP_001016453.1 UniGene:Str.10574
ProteinModelPortal:Q05AS3 SMR:Q05AS3 STRING:Q05AS3
Ensembl:ENSXETT00000057121 GeneID:549207 KEGG:xtr:549207
Xenbase:XB-GENE-947839 Bgee:Q05AS3 Uniprot:Q05AS3
Length = 603
Score = 96 (38.9 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 38/140 (27%), Positives = 68/140 (48%)
Query: 173 VRNRMRKLYTNNGSNWVHVVFEH-----PAT-FQTLAMEPAEKKEIIDDLIAFSKSEDFY 226
VR + K N SN +++ P F +A + K+ + + +I S + +
Sbjct: 296 VRKKDMKNLRNVDSNLANLILNEIVDSGPTVKFADIAGQDLAKQALQEIVILPSIRPELF 355
Query: 227 ARIGRAWKRGYLLYGPPGTGKSTM---IAAMANLLGYDLYDLELTA--VKDNTELRKLLI 281
+ RA RG LL+GPPG GK+ + +AA +N +++ LT+ V + +L + L
Sbjct: 356 TGL-RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALF 414
Query: 282 ETSSK---SIIVIEDIDCSL 298
+ + SII I+++D L
Sbjct: 415 SVARELQPSIIFIDEVDSLL 434
Score = 81 (33.6 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 36/126 (28%), Positives = 61/126 (48%)
Query: 341 LLNFIDGLWSACGGERLIVF-TTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNY 399
L+ F DG+ S G +R++V TN ++LD A++R R K + +S + E +L KN
Sbjct: 453 LIEF-DGVQSG-GDDRVLVMGATNRPQELDDAVLR--RFTKRVYVSLPNEETRLLLLKNL 508
Query: 400 LNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLN--QALELAKEEAR 457
L+ + + L +K EL +++T + A + +R L Q +A E R
Sbjct: 509 LSKQGNPLNEK--ELTQLSRLTEGYSGSDITALAKDAALG-PIRELKPEQVKNMAASEMR 565
Query: 458 RVKVDD 463
+K D
Sbjct: 566 NIKYSD 571
Score = 42 (19.8 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 61 DRFMRSEAYSAIENYLSSKSSTQA-KRLKADIIKNSSQSLVLS 102
DR R +A + N L +K Q +LKADI SQ V S
Sbjct: 165 DRARRLQAKMST-NLLMAKDRLQLLAKLKADIQGQHSQMEVCS 206
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 90 (36.7 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 328 ERETNNSQV--TLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELS 385
E T +S+V T+ LLN +DG + A ++I+ TN I+ LD AL+R GR+D+ IE
Sbjct: 254 ETGTGDSEVQRTMLELLNQLDG-FEATKNIKVIM-ATNRIDVLDQALLRPGRIDRKIEFP 311
Query: 386 HCSYEA 391
+ EA
Sbjct: 312 PPNEEA 317
Score = 85 (35.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E KE+I+ + K + + +G +G LLYGPPGTGK+ + A+A+
Sbjct: 154 EIKEVIELPV---KHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAH 199
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 50/177 (28%), Positives = 84/177 (47%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLEL 267
E KE+I+ I K + + +G A +G LLYGPPGTGK+ + A+A + +
Sbjct: 156 EIKEVIELPI---KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA-------HHTDC 205
Query: 268 TAVK-DNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGK 326
T ++ +EL + I S+ ++ ++ + + R + G
Sbjct: 206 TFIRVSGSELVQKYIGEGSR---MVREL---FIMAREHAPSIIFMDEIDSIGSSRGESGS 259
Query: 327 EERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
++ Q T+ LLN +DG S + ++ TN I+ LDPAL+R GR+D+ IE
Sbjct: 260 GGGDSE-VQRTMLELLNQLDGFESTKNIK--VLMCTNRIDILDPALLRPGRIDRKIE 313
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 53/190 (27%), Positives = 89/190 (46%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMI---AAMANLLGYDLYDLE 266
+E+++ ++ ++ + +G +G L+YGPPGTGK+ + AA L +
Sbjct: 180 QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 239
Query: 267 LTA--VKDNTELRK---LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
L + D +L + L + + SII I++ LD G +R
Sbjct: 240 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDE----LDAIGTKRFDS------------- 282
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+K G +RE Q T+ LLN +DG + ++ TN ++ LDPAL+R GR+D+
Sbjct: 283 EKAG--DREV---QRTMLELLNQLDGFQPNM--QVKVIAATNRVDILDPALLRSGRLDRK 335
Query: 382 IELSHCSYEA 391
IE + EA
Sbjct: 336 IEFPMPNEEA 345
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 98 (39.6 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 31/99 (31%), Positives = 46/99 (46%)
Query: 324 LGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
+GK R T + TL LL +DG + +I+ TN LDPAL+R GR D+HI
Sbjct: 404 VGKS-RNTAHHNETLLQLLTEMDGFEG--NSQIMIIGATNAPNSLDPALLRPGRFDRHIS 460
Query: 384 LSHCSYEAFKVLAKNYLNIESHNLFDKIGELLGEAKMTP 422
+ + + +YL H + K + A+ TP
Sbjct: 461 VPIPDMKGRSEIIDHYLKKVKHTVEVKADTI---ARATP 496
Score = 83 (34.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 30/97 (30%), Positives = 46/97 (47%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYD-LY--- 263
E KE +++++ + Y IG +G LL G PGTGK+ + A+A G LY
Sbjct: 307 EVKEELEEIVDYLLHPTKYNSIGAKLPKGVLLSGEPGTGKTLLARAIAGEAGVSFLYTTG 366
Query: 264 ---DLELTAVKDNTELRKLLIETSSKS--IIVIEDID 295
D + V + +R+L K II I++ID
Sbjct: 367 SSFDEKYVGV-GSRRVRELFNAAREKQPCIIFIDEID 402
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 130 (50.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 53/190 (27%), Positives = 89/190 (46%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMI---AAMANLLGYDLYDLE 266
+E+++ ++ ++ + +G +G L+YGPPGTGK+ + AA L +
Sbjct: 184 QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 243
Query: 267 LTA--VKDNTELRK---LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
L + D +L + L + + SII I++ LD G +R
Sbjct: 244 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDE----LDAIGTKRFDS------------- 286
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+K G +RE Q T+ LLN +DG + ++ TN ++ LDPAL+R GR+D+
Sbjct: 287 EKAG--DREV---QRTMLELLNQLDGFQPNM--QVKVIAATNRVDILDPALLRSGRLDRK 339
Query: 382 IELSHCSYEA 391
IE + EA
Sbjct: 340 IEFPMPNEEA 349
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 101 (40.6 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 36/124 (29%), Positives = 61/124 (49%)
Query: 183 NNGSNWVHVVFEHPATFQTLA---MEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLL 239
NN +N + FQ++ ++ + +E+ID ++F K D G +G LL
Sbjct: 295 NNSNNKIDNNKNINLNFQSIGGLDLQVKQIRELID--LSFYKL-DLLKSFGVKPPKGILL 351
Query: 240 YGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDN----TE--LRKLLIETSSKS--IIVI 291
YGPPGTGK+ + +A L+ + + D TE L+K+ + + KS II I
Sbjct: 352 YGPPGTGKTLLARIVATQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFI 411
Query: 292 EDID 295
+++D
Sbjct: 412 DELD 415
Score = 81 (33.6 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 32/122 (26%), Positives = 59/122 (48%)
Query: 352 CGGERLIVF-TTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNYLN-IESHNLFD 409
CGG+++IV TN + +D AL R GR D IE+S + + + + +L+ I +
Sbjct: 464 CGGDKVIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQ 523
Query: 410 KIGELLGEAK-MTPADV---AEHLMPKTFPADVEFSLRSLNQALELAKEEARRVKVDDKE 465
+I + + AD+ + K F ++ + L Q++ + KEE + K + +E
Sbjct: 524 EIAMIASKTHGFVGADIESLCKEASLKCFNR-IKNENQKLFQSINIEKEE--KGKEEKQE 580
Query: 466 AN 467
N
Sbjct: 581 EN 582
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 50/164 (30%), Positives = 74/164 (45%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTELRK 278
+ Y +G +G +LYG PGTGK+ + A+AN + EL + D L +
Sbjct: 228 ELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVR 287
Query: 279 LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTL 338
+ + +++ I ID +D G +R ERE Q T+
Sbjct: 288 QIFQVAAEHAPSIVFID-EIDAIGTKRYDSTSGG---------------EREI---QRTM 328
Query: 339 SGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHI 382
LLN +DG G+ ++ TN IE LDPALIR GR+D+ I
Sbjct: 329 LELLNQLDGFDDR--GDVKVIMATNKIETLDPALIRPGRIDRKI 370
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 129 (50.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 50/164 (30%), Positives = 74/164 (45%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTELRK 278
+ Y +G +G +LYG PGTGK+ + A+AN + EL + D L +
Sbjct: 206 ELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCR 265
Query: 279 LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTL 338
+ + + ++ I ID +D G +R ERE Q T+
Sbjct: 266 QIFKVAGENAPSIVFID-EIDAIGTKRYDSNSGG---------------EREI---QRTM 306
Query: 339 SGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHI 382
LLN +DG G+ ++ TN IE LDPALIR GR+D+ I
Sbjct: 307 LELLNQLDGFDDR--GDVKVIMATNKIETLDPALIRPGRIDRKI 348
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 57/193 (29%), Positives = 94/193 (48%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYD 261
L+ + E +E+I+ + + E + R+G +G LLYGPPGTGK+ + A+A+ L +
Sbjct: 130 LSEQIRELREVIE--LPLTNPE-LFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 186
Query: 262 LYDLELTAVKDNT--ELRKLLIETSSKS------IIVIEDIDCSLDLTGQRRXXXXXXXX 313
+ +++ D E +L+ E + + II +++ID G RR
Sbjct: 187 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA----IGGRRFSEGTSA- 241
Query: 314 XXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALI 373
+RE Q TL LLN +DG + ++I+ TN + LDPAL+
Sbjct: 242 --------------DREI---QRTLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALL 282
Query: 374 RKGRMDK--HIEL 384
R GR+D+ HI+L
Sbjct: 283 RPGRLDRKIHIDL 295
>UNIPROTKB|Q6AZT2 [details] [associations]
symbol:spast "Spastin" species:8355 "Xenopus laevis"
[GO:0001578 "microtubule bundle formation" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0048487 "beta-tubulin binding"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0015630
"microtubule cytoskeleton" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
GO:GO:0048487 GO:GO:0008017 HSSP:O75351 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 GO:GO:0043014 SMART:SM00745
GO:GO:0034214 KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502
EMBL:BC077358 RefSeq:NP_001086725.1 UniGene:Xl.32426
ProteinModelPortal:Q6AZT2 SMR:Q6AZT2 GeneID:446560 KEGG:xla:446560
Xenbase:XB-GENE-947846 Uniprot:Q6AZT2
Length = 600
Score = 97 (39.2 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 38/140 (27%), Positives = 69/140 (49%)
Query: 173 VRNRMRKLYTNNGSNWVHVVFEH-----PAT-FQTLAMEPAEKKEIIDDLIAFSKSEDFY 226
VR + K N SN +++ P+ F +A + K+ + + +I S + +
Sbjct: 293 VRKKDMKNLRNVDSNLANLILNEIVDSGPSVKFADIAGQDLAKQALQEIVILPSIRPELF 352
Query: 227 ARIGRAWKRGYLLYGPPGTGKSTM---IAAMANLLGYDLYDLELTA--VKDNTELRKLLI 281
+ RA RG LL+GPPG GK+ + +AA +N +++ LT+ V + +L + L
Sbjct: 353 TGL-RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALF 411
Query: 282 ETSSK---SIIVIEDIDCSL 298
+ + SII I+++D L
Sbjct: 412 SVARELQPSIIFIDEVDSLL 431
Score = 80 (33.2 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 36/126 (28%), Positives = 61/126 (48%)
Query: 341 LLNFIDGLWSACGGERLIVF-TTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNY 399
L+ F DG+ S G +R++V TN ++LD A++R R K + ++ + E VL KN
Sbjct: 450 LIEF-DGVQSG-GDDRVLVMGATNRPQELDDAVLR--RFTKRVYVALPNEETRLVLLKNL 505
Query: 400 LNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLN--QALELAKEEAR 457
L+ + + L +K EL +++T + A + +R L Q +A E R
Sbjct: 506 LSKQGNPLSEK--ELTQLSRLTEGYSGSDITALAKDAALG-PIRELKPEQVKNMAASEMR 562
Query: 458 RVKVDD 463
+K D
Sbjct: 563 NMKYSD 568
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 98 (39.6 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
N Q T+ L+N +DG G ++ TN + LDPAL+R GR+D+ IE S E
Sbjct: 284 NEVQRTMLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 341
Query: 392 ----FKVLAKNYLNIESHNLFDKIGEL 414
FK+ A++ +++E F+ + L
Sbjct: 342 RTHIFKIHARS-MSVERDIRFELLARL 367
Score = 75 (31.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 205 EPAEK-KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E EK +E+++ + + + +G +G LL+GPPGTGK+ A+AN
Sbjct: 173 EQIEKLREVVETPLLHPER---FVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 222
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 128 (50.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 57/193 (29%), Positives = 94/193 (48%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYD 261
L+ + E +E+I+ + + E + R+G +G LLYGPPGTGK+ + A+A+ L +
Sbjct: 138 LSEQIRELREVIE--LPLTNPE-LFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 194
Query: 262 LYDLELTAVKDNT--ELRKLLIETSSKS------IIVIEDIDCSLDLTGQRRXXXXXXXX 313
+ +++ D E +L+ E + + II +++ID G RR
Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA----IGGRRFSEGTSA- 249
Query: 314 XXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALI 373
+RE Q TL LLN +DG + ++I+ TN + LDPAL+
Sbjct: 250 --------------DREI---QRTLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALL 290
Query: 374 RKGRMDK--HIEL 384
R GR+D+ HI+L
Sbjct: 291 RPGRLDRKIHIDL 303
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 128 (50.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 57/193 (29%), Positives = 94/193 (48%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYD 261
L+ + E +E+I+ + + E + R+G +G LLYGPPGTGK+ + A+A+ L +
Sbjct: 138 LSEQIRELREVIE--LPLTNPE-LFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 194
Query: 262 LYDLELTAVKDNT--ELRKLLIETSSKS------IIVIEDIDCSLDLTGQRRXXXXXXXX 313
+ +++ D E +L+ E + + II +++ID G RR
Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA----IGGRRFSEGTSA- 249
Query: 314 XXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALI 373
+RE Q TL LLN +DG + ++I+ TN + LDPAL+
Sbjct: 250 --------------DREI---QRTLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALL 290
Query: 374 RKGRMDK--HIEL 384
R GR+D+ HI+L
Sbjct: 291 RPGRLDRKIHIDL 303
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 128 (50.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 57/193 (29%), Positives = 94/193 (48%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYD 261
L+ + E +E+I+ + + E + R+G +G LLYGPPGTGK+ + A+A+ L +
Sbjct: 138 LSEQIRELREVIE--LPLTNPE-LFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 194
Query: 262 LYDLELTAVKDNT--ELRKLLIETSSKS------IIVIEDIDCSLDLTGQRRXXXXXXXX 313
+ +++ D E +L+ E + + II +++ID G RR
Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA----IGGRRFSEGTSA- 249
Query: 314 XXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALI 373
+RE Q TL LLN +DG + ++I+ TN + LDPAL+
Sbjct: 250 --------------DREI---QRTLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALL 290
Query: 374 RKGRMDK--HIEL 384
R GR+D+ HI+L
Sbjct: 291 RPGRLDRKIHIDL 303
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 128 (50.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 57/193 (29%), Positives = 94/193 (48%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYD 261
L+ + E +E+I+ + + E + R+G +G LLYGPPGTGK+ + A+A+ L +
Sbjct: 138 LSEQIRELREVIE--LPLTNPE-LFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 194
Query: 262 LYDLELTAVKDNT--ELRKLLIETSSKS------IIVIEDIDCSLDLTGQRRXXXXXXXX 313
+ +++ D E +L+ E + + II +++ID G RR
Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA----IGGRRFSEGTSA- 249
Query: 314 XXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALI 373
+RE Q TL LLN +DG + ++I+ TN + LDPAL+
Sbjct: 250 --------------DREI---QRTLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALL 290
Query: 374 RKGRMDK--HIEL 384
R GR+D+ HI+L
Sbjct: 291 RPGRLDRKIHIDL 303
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 128 (50.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 57/193 (29%), Positives = 94/193 (48%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYD 261
L+ + E +E+I+ + + E + R+G +G LLYGPPGTGK+ + A+A+ L +
Sbjct: 138 LSEQIRELREVIE--LPLTNPE-LFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 194
Query: 262 LYDLELTAVKDNT--ELRKLLIETSSKS------IIVIEDIDCSLDLTGQRRXXXXXXXX 313
+ +++ D E +L+ E + + II +++ID G RR
Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA----IGGRRFSEGTSA- 249
Query: 314 XXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALI 373
+RE Q TL LLN +DG + ++I+ TN + LDPAL+
Sbjct: 250 --------------DREI---QRTLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALL 290
Query: 374 RKGRMDK--HIEL 384
R GR+D+ HI+L
Sbjct: 291 RPGRLDRKIHIDL 303
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 128 (50.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 57/193 (29%), Positives = 94/193 (48%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYD 261
L+ + E +E+I+ + + E + R+G +G LLYGPPGTGK+ + A+A+ L +
Sbjct: 138 LSEQIRELREVIE--LPLTNPE-LFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 194
Query: 262 LYDLELTAVKDNT--ELRKLLIETSSKS------IIVIEDIDCSLDLTGQRRXXXXXXXX 313
+ +++ D E +L+ E + + II +++ID G RR
Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA----IGGRRFSEGTSA- 249
Query: 314 XXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALI 373
+RE Q TL LLN +DG + ++I+ TN + LDPAL+
Sbjct: 250 --------------DREI---QRTLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALL 290
Query: 374 RKGRMDK--HIEL 384
R GR+D+ HI+L
Sbjct: 291 RPGRLDRKIHIDL 303
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 128 (50.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 49/168 (29%), Positives = 78/168 (46%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNT--ELRKLLI 281
+ + R+G +G LLYGPPGTGK+ + A+A+ L + + +A+ D E +++
Sbjct: 161 ELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIR 220
Query: 282 ET-----SSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQV 336
E + ++ D +D G RR +RE Q
Sbjct: 221 EMFGYARDHQPCVIFMD---EIDAIGGRRFSEGTSA---------------DREI---QR 259
Query: 337 TLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
TL LLN +DG + + I+ TN + LDPAL+R GR+D+ IE+
Sbjct: 260 TLMELLNQMDGFDTL--SKVKIIMATNRPDVLDPALLRPGRLDRKIEI 305
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 128 (50.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 57/193 (29%), Positives = 94/193 (48%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYD 261
L+ + E +E+I+ + + E + R+G +G LLYGPPGTGK+ + A+A+ L +
Sbjct: 144 LSEQIRELREVIE--LPLTNPE-LFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 200
Query: 262 LYDLELTAVKDNT--ELRKLLIETSSKS------IIVIEDIDCSLDLTGQRRXXXXXXXX 313
+ +++ D E +L+ E + + II +++ID G RR
Sbjct: 201 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA----IGGRRFSEGTSA- 255
Query: 314 XXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALI 373
+RE Q TL LLN +DG + ++I+ TN + LDPAL+
Sbjct: 256 --------------DREI---QRTLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALL 296
Query: 374 RKGRMDK--HIEL 384
R GR+D+ HI+L
Sbjct: 297 RPGRLDRKIHIDL 309
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 98 (39.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
N Q T+ L+N +DG G ++ TN + LDPAL+R GR+D+ IE S E
Sbjct: 292 NEVQRTMLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 349
Query: 392 ----FKVLAKNYLNIESHNLFDKIGEL 414
FK+ A++ +++E F+ + L
Sbjct: 350 RTHIFKIHARS-MSVERDIRFELLARL 375
Score = 75 (31.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 205 EPAEK-KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E EK +E+++ + + + +G +G LL+GPPGTGK+ A+AN
Sbjct: 181 EQIEKLREVVETPLLHPER---FVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 230
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 98 (39.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
N Q T+ L+N +DG G ++ TN + LDPAL+R GR+D+ IE S E
Sbjct: 293 NEVQRTMLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350
Query: 392 ----FKVLAKNYLNIESHNLFDKIGEL 414
FK+ A++ +++E F+ + L
Sbjct: 351 RTHIFKIHARS-MSVERDIRFELLARL 376
Score = 75 (31.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 205 EPAEK-KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E EK +E+++ + + + +G +G LL+GPPGTGK+ A+AN
Sbjct: 182 EQIEKLREVVETPLLHPER---FVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 98 (39.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
N Q T+ L+N +DG G ++ TN + LDPAL+R GR+D+ IE S E
Sbjct: 293 NEVQRTMLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350
Query: 392 ----FKVLAKNYLNIESHNLFDKIGEL 414
FK+ A++ +++E F+ + L
Sbjct: 351 RTHIFKIHARS-MSVERDIRFELLARL 376
Score = 75 (31.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 205 EPAEK-KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E EK +E+++ + + + +G +G LL+GPPGTGK+ A+AN
Sbjct: 182 EQIEKLREVVETPLLHPER---FVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 98 (39.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
N Q T+ L+N +DG G ++ TN + LDPAL+R GR+D+ IE S E
Sbjct: 293 NEVQRTMLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350
Query: 392 ----FKVLAKNYLNIESHNLFDKIGEL 414
FK+ A++ +++E F+ + L
Sbjct: 351 RTHIFKIHARS-MSVERDIRFELLARL 376
Score = 75 (31.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 205 EPAEK-KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E EK +E+++ + + + +G +G LL+GPPGTGK+ A+AN
Sbjct: 182 EQIEKLREVVETPLLHPER---FVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 98 (39.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
N Q T+ L+N +DG G ++ TN + LDPAL+R GR+D+ IE S E
Sbjct: 293 NEVQRTMLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350
Query: 392 ----FKVLAKNYLNIESHNLFDKIGEL 414
FK+ A++ +++E F+ + L
Sbjct: 351 RTHIFKIHARS-MSVERDIRFELLARL 376
Score = 75 (31.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 205 EPAEK-KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E EK +E+++ + + + +G +G LL+GPPGTGK+ A+AN
Sbjct: 182 EQIEKLREVVETPLLHPER---FVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 98 (39.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
N Q T+ L+N +DG G ++ TN + LDPAL+R GR+D+ IE S E
Sbjct: 293 NEVQRTMLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350
Query: 392 ----FKVLAKNYLNIESHNLFDKIGEL 414
FK+ A++ +++E F+ + L
Sbjct: 351 RTHIFKIHARS-MSVERDIRFELLARL 376
Score = 75 (31.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 205 EPAEK-KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E EK +E+++ + + + +G +G LL+GPPGTGK+ A+AN
Sbjct: 182 EQIEKLREVVETPLLHPER---FVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 98 (39.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
N Q T+ L+N +DG G ++ TN + LDPAL+R GR+D+ IE S E
Sbjct: 293 NEVQRTMLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350
Query: 392 ----FKVLAKNYLNIESHNLFDKIGEL 414
FK+ A++ +++E F+ + L
Sbjct: 351 RTHIFKIHARS-MSVERDIRFELLARL 376
Score = 75 (31.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 205 EPAEK-KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E EK +E+++ + + + +G +G LL+GPPGTGK+ A+AN
Sbjct: 182 EQIEKLREVVETPLLHPER---FVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 98 (39.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
N Q T+ L+N +DG G ++ TN + LDPAL+R GR+D+ IE S E
Sbjct: 293 NEVQRTMLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350
Query: 392 ----FKVLAKNYLNIESHNLFDKIGEL 414
FK+ A++ +++E F+ + L
Sbjct: 351 RTHIFKIHARS-MSVERDIRFELLARL 376
Score = 75 (31.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 205 EPAEK-KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E EK +E+++ + + + +G +G LL+GPPGTGK+ A+AN
Sbjct: 182 EQIEKLREVVETPLLHPER---FVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 98 (39.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
N Q T+ L+N +DG G ++ TN + LDPAL+R GR+D+ IE S E
Sbjct: 293 NEVQRTMLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350
Query: 392 ----FKVLAKNYLNIESHNLFDKIGEL 414
FK+ A++ +++E F+ + L
Sbjct: 351 RTHIFKIHARS-MSVERDIRFELLARL 376
Score = 75 (31.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 205 EPAEK-KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E EK +E+++ + + + +G +G LL+GPPGTGK+ A+AN
Sbjct: 182 EQIEKLREVVETPLLHPER---FVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 98 (39.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
N Q T+ L+N +DG G ++ TN + LDPAL+R GR+D+ IE S E
Sbjct: 293 NEVQRTMLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350
Query: 392 ----FKVLAKNYLNIESHNLFDKIGEL 414
FK+ A++ +++E F+ + L
Sbjct: 351 RTHIFKIHARS-MSVERDIRFELLARL 376
Score = 75 (31.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 205 EPAEK-KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E EK +E+++ + + + +G +G LL+GPPGTGK+ A+AN
Sbjct: 182 EQIEKLREVVETPLLHPER---FVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 132 (51.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 56/200 (28%), Positives = 87/200 (43%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL-- 265
E KE I + + F + Y ++G RG +L GPPGTGK+ + A A G +
Sbjct: 294 ESKEEIMEFVKFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFLSVSG 353
Query: 266 ----ELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
E+ + +R L +T+ + I +D +D G+ R
Sbjct: 354 SEFVEMFVGVGASRVRDLF-KTAREMAPAIIFVD-EIDAIGKERGNGRMG---------- 401
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
G +ERE TL+ LL +DG + +++ TN + LD AL+R GR D+H
Sbjct: 402 ---GNDEREN-----TLNQLLVEMDGFDTT--DHVVVLAGTNRPDILDKALLRPGRFDRH 451
Query: 382 IELSHCSYEAFKVLAKNYLN 401
I + E K + K +LN
Sbjct: 452 ISIDVPDVEGRKQIFKVHLN 471
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 132 (51.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 56/200 (28%), Positives = 87/200 (43%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL-- 265
E KE I + + F + Y ++G RG +L GPPGTGK+ + A A G +
Sbjct: 294 ESKEEIMEFVKFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFLSVSG 353
Query: 266 ----ELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
E+ + +R L +T+ + I +D +D G+ R
Sbjct: 354 SEFVEMFVGVGASRVRDLF-KTAREMAPAIIFVD-EIDAIGKERGNGRMG---------- 401
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
G +ERE TL+ LL +DG + +++ TN + LD AL+R GR D+H
Sbjct: 402 ---GNDEREN-----TLNQLLVEMDGFDTT--DHVVVLAGTNRPDILDKALLRPGRFDRH 451
Query: 382 IELSHCSYEAFKVLAKNYLN 401
I + E K + K +LN
Sbjct: 452 ISIDVPDVEGRKQIFKVHLN 471
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 57/193 (29%), Positives = 94/193 (48%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYD 261
L+ + E +E+I+ + + E + R+G +G LLYGPPGTGK+ + A+A+ L +
Sbjct: 152 LSEQIRELREVIE--LPLTNPE-LFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 208
Query: 262 LYDLELTAVKDNT--ELRKLLIETSSKS------IIVIEDIDCSLDLTGQRRXXXXXXXX 313
+ +++ D E +L+ E + + II +++ID G RR
Sbjct: 209 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA----IGGRRFSEGTSA- 263
Query: 314 XXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALI 373
+RE Q TL LLN +DG + ++I+ TN + LDPAL+
Sbjct: 264 --------------DREI---QRTLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALL 304
Query: 374 RKGRMDK--HIEL 384
R GR+D+ HI+L
Sbjct: 305 RPGRLDRKIHIDL 317
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 57/193 (29%), Positives = 94/193 (48%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYD 261
L+ + E +E+I+ + + E + R+G +G LLYGPPGTGK+ + A+A+ L +
Sbjct: 152 LSEQIRELREVIE--LPLTNPE-LFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 208
Query: 262 LYDLELTAVKDNT--ELRKLLIETSSKS------IIVIEDIDCSLDLTGQRRXXXXXXXX 313
+ +++ D E +L+ E + + II +++ID G RR
Sbjct: 209 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA----IGGRRFSEGTSA- 263
Query: 314 XXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALI 373
+RE Q TL LLN +DG + ++I+ TN + LDPAL+
Sbjct: 264 --------------DREI---QRTLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALL 304
Query: 374 RKGRMDK--HIEL 384
R GR+D+ HI+L
Sbjct: 305 RPGRLDRKIHIDL 317
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 57/193 (29%), Positives = 94/193 (48%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYD 261
L+ + E +E+I+ + + E + R+G +G LLYGPPGTGK+ + A+A+ L +
Sbjct: 152 LSEQIRELREVIE--LPLTNPE-LFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 208
Query: 262 LYDLELTAVKDNT--ELRKLLIETSSKS------IIVIEDIDCSLDLTGQRRXXXXXXXX 313
+ +++ D E +L+ E + + II +++ID G RR
Sbjct: 209 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA----IGGRRFSEGTSA- 263
Query: 314 XXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALI 373
+RE Q TL LLN +DG + ++I+ TN + LDPAL+
Sbjct: 264 --------------DREI---QRTLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALL 304
Query: 374 RKGRMDK--HIEL 384
R GR+D+ HI+L
Sbjct: 305 RPGRLDRKIHIDL 317
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 98 (39.6 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
N Q T+ L+N +DG G ++ TN + LDPAL+R GR+D+ IE S E
Sbjct: 294 NEVQRTMLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 351
Query: 392 ----FKVLAKNYLNIESHNLFDKIGEL 414
FK+ A++ +++E F+ + L
Sbjct: 352 RTHIFKIHARS-MSVERDIRFELLARL 377
Score = 75 (31.5 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 205 EPAEK-KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E EK +E+++ + + + +G +G LL+GPPGTGK+ A+AN
Sbjct: 183 EQIEKLREVVETPLLHPER---FVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 232
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 91 (37.1 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 328 ERETNNSQV---TLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
+RE N +V +S LL +DG+ S G+ +++ TN +DPAL R GR D+ I++
Sbjct: 315 KREKTNGEVERRVVSQLLTLMDGIKSR--GQVVVIAATNRQNSIDPALRRFGRFDREIDI 372
Query: 385 S----HCSYEAFKVLAKN 398
+ +E ++ KN
Sbjct: 373 GVPDDNGRFEILRIHTKN 390
Score = 89 (36.4 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 31/98 (31%), Positives = 51/98 (52%)
Query: 209 KKEI--IDDLIAFS-KSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLG--YDLY 263
KK++ I ++I + + +G RG LLYGPPG+GK+ + A+AN G + L
Sbjct: 213 KKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLI 272
Query: 264 D----LELTAVKDNTELRKLL--IETSSKSIIVIEDID 295
+ + A + LR+ E +S +II I++ID
Sbjct: 273 NGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEID 310
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 91 (37.1 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 328 ERETNNSQV---TLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
+RE N +V +S LL +DG+ S G+ +++ TN +DPAL R GR D+ I++
Sbjct: 315 KREKTNGEVERRVVSQLLTLMDGIKSR--GQVVVIAATNRQNSIDPALRRFGRFDREIDI 372
Query: 385 S----HCSYEAFKVLAKN 398
+ +E ++ KN
Sbjct: 373 GVPDDNGRFEILRIHTKN 390
Score = 89 (36.4 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 31/98 (31%), Positives = 51/98 (52%)
Query: 209 KKEI--IDDLIAFS-KSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLG--YDLY 263
KK++ I ++I + + +G RG LLYGPPG+GK+ + A+AN G + L
Sbjct: 213 KKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLI 272
Query: 264 D----LELTAVKDNTELRKLL--IETSSKSIIVIEDID 295
+ + A + LR+ E +S +II I++ID
Sbjct: 273 NGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEID 310
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 128 (50.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 57/213 (26%), Positives = 98/213 (46%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMI---AAMANLLGYDLYDLE 266
+E+++ ++ ++ + IG +G L+YGPPGTGK+ + AA N L +
Sbjct: 178 QELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQ 237
Query: 267 LTA--VKDNTELRK---LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
L + D +L + L + +II I++ LD G +R
Sbjct: 238 LVQMFIGDGAKLVRDAFALAKEKGPTIIFIDE----LDAIGTKRFDSEVSG--------- 284
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
+RE Q T+ LLN +DG S + ++ TN I+ LDPAL+R GR+D+
Sbjct: 285 ------DREV---QRTMLELLNQLDGFSSDANIK--VIAATNRIDILDPALLRSGRLDRK 333
Query: 382 IELSHCSYEAFKVLAKNY---LNIESHNLFDKI 411
IE + EA + + + +N+ + FD++
Sbjct: 334 IEFPLPNEEARAHILQIHSRKMNVSADVNFDEL 366
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 104 (41.7 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 31/78 (39%), Positives = 43/78 (55%)
Query: 226 YARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLG--YDLYD----LELTAVKDNTELRKL 279
+ IG RG LLYGPPGTGK+ M A+AN G + L + + A + + LRK
Sbjct: 248 FKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKA 307
Query: 280 L--IETSSKSIIVIEDID 295
E +S +II I++ID
Sbjct: 308 FEEAEKNSPAIIFIDEID 325
Score = 75 (31.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 328 ERETNNSQV---TLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
+RE N +V +S LL +DG+ + +++ TN +DPAL R GR D+ +++
Sbjct: 330 KREKTNGEVERRVVSQLLTLMDGMKAR--SNVVVMAATNRPNSIDPALRRFGRFDREVDI 387
>DICTYBASE|DDB_G0276153 [details] [associations]
symbol:nsfA "N-ethylmaleimide-sensitive fusion
protein" species:44689 "Dictyostelium discoideum" [GO:0006928
"cellular component movement" evidence=IMP] [GO:0006897
"endocytosis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006909 "phagocytosis" evidence=IMP] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0276153 GO:GO:0005524 GO:GO:0016020
GO:GO:0046872 GO:GO:0015031 GO:GO:0006909 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0006928 GO:GO:0010008 GO:GO:0006935
GO:GO:0030659 HSSP:Q01853 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 KO:K06027 OMA:MTSGQRV
EMBL:AF006826 RefSeq:XP_643273.1 ProteinModelPortal:Q75JI3
IntAct:Q75JI3 STRING:Q75JI3 EnsemblProtists:DDB0185052
GeneID:8620316 KEGG:ddi:DDB_G0276153 Uniprot:Q75JI3
Length = 738
Score = 131 (51.2 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 62/247 (25%), Positives = 101/247 (40%)
Query: 184 NGSNWVHVVFEHPATFQTLAME--PAEKKEIIDDLIAFSKS---EDFYARIGRAWKRGYL 238
NG V+ +F F+ + + AE ++I AFS ++G +G L
Sbjct: 204 NGPLVVNQIFTSDWDFENMGIGGLDAEFRDIFRR--AFSSRIFPPAIVKKLGVNHVKGML 261
Query: 239 LYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVIEDIDCSL 298
LYGPPGTGK T+IA +G L E V + L K + ++ ++ D +
Sbjct: 262 LYGPPGTGK-TLIARQ---IGKMLNGREPKVVSGPSILNKYVGQSEENIRMLFRDAEIEQ 317
Query: 299 DLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLI 358
G + G + ++ ++ LL IDG+ S L+
Sbjct: 318 KAKGDDSGLHIIIFDELDAICKSR--GSRQGDSGVGDSVVNQLLAMIDGVESL--NNILV 373
Query: 359 VFTTNYIEKLDPALIRKGRMDKHIELS----HCSYEAFKVLAKNYLNIESHNLFDKIGEL 414
+ TN + +D AL+R GR++ H+E+S H + FK+ + + N DK L
Sbjct: 374 IGMTNRKDMIDEALLRPGRLEVHVEISLPDEHGREQIFKI---HTAKMRDQNALDKDVNL 430
Query: 415 LGEAKMT 421
A T
Sbjct: 431 ANYAHTT 437
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 94 (38.1 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 194 EHPATFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAA 253
E P T M E K + DL+ F ++ + Y R +G LL GPPGTGK+ + +
Sbjct: 157 ERPNTTFADVMGAEEAKGELQDLVDFLRNPEKYYRRNIVMPKGILLVGPPGTGKTLLAKS 216
Query: 254 MA 255
+A
Sbjct: 217 LA 218
Score = 84 (34.6 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 30/86 (34%), Positives = 43/86 (50%)
Query: 325 GKEERETN-NSQVTLSGLLNFIDGLWSACGGERLIVFT-TNYIEKLDPALIRKGRMDKHI 382
G + N + L+ LL +DG G E ++V TNY + LD ALIR GR D+ I
Sbjct: 270 GSRTKRVNYHPSEALNQLLVELDGF---DGREGVMVMAATNYQDSLDTALIRSGRFDRII 326
Query: 383 ELSHCSYEAFKVLAKNYLN---IESH 405
++ +A K + +YL I SH
Sbjct: 327 QVPLPDGKARKSIIDHYLKDKPIASH 352
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 128 (50.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 50/164 (30%), Positives = 73/164 (44%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTELRK 278
+ Y +G +G +LYG PGTGK+ + A+AN + EL + D L +
Sbjct: 210 ELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCR 269
Query: 279 LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQVTL 338
+ + ++ I ID +D G +R ERE Q T+
Sbjct: 270 QIFQIAADHAPSIVFID-EIDAIGTKRYESTSGG---------------EREI---QRTM 310
Query: 339 SGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHI 382
LLN +DG G+ ++ TN IE LDPALIR GR+D+ I
Sbjct: 311 LELLNQLDGFDDR--GDIKVIMATNKIESLDPALIRPGRIDRKI 352
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 98 (39.6 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
N Q T+ L+N +DG G ++ TN + LDPAL+R GR+D+ IE S E
Sbjct: 335 NEVQRTMLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 392
Query: 392 ----FKVLAKNYLNIESHNLFDKIGEL 414
FK+ A++ +++E F+ + L
Sbjct: 393 RTHIFKIHARS-MSVERDIRFELLARL 418
Score = 75 (31.5 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 205 EPAEK-KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E EK +E+++ + + + +G +G LL+GPPGTGK+ A+AN
Sbjct: 224 EQIEKLREVVETPLLHPER---FVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 273
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 130 (50.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 49/193 (25%), Positives = 86/193 (44%)
Query: 198 TFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANL 257
TF +A K++ ++ ++ F K + + +G +G LL GPPGTGK+ + A+A
Sbjct: 218 TFDDVAGVDEAKQDFME-VVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 276
Query: 258 LGYDLYDL------ELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXX 311
G + + E+ + +R L + + ++ +D +D G++R
Sbjct: 277 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVF-VD-EIDAVGRQRGTGIGG 334
Query: 312 XXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPA 371
G +ERE TL+ LL +DG G ++V TN + LD A
Sbjct: 335 -------------GNDEREQ-----TLNQLLTEMDGFEGNTGV--IVVAATNRADILDSA 374
Query: 372 LIRKGRMDKHIEL 384
L+R GR D+ + +
Sbjct: 375 LLRPGRFDRQVSV 387
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 130 (50.8 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 49/193 (25%), Positives = 86/193 (44%)
Query: 198 TFQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANL 257
TF +A K++ ++ ++ F K + + +G +G LL GPPGTGK+ + A+A
Sbjct: 225 TFDDVAGVDEAKQDFME-VVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGE 283
Query: 258 LGYDLYDL------ELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXX 311
G + + E+ + +R L + + ++ +D +D G++R
Sbjct: 284 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVF-VD-EIDAVGRQRGTGIGG 341
Query: 312 XXXXXXXXPRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPA 371
G +ERE TL+ LL +DG G ++V TN + LD A
Sbjct: 342 -------------GNDEREQ-----TLNQLLTEMDGFEGNTGV--IVVAATNRADILDSA 381
Query: 372 LIRKGRMDKHIEL 384
L+R GR D+ + +
Sbjct: 382 LLRPGRFDRQVSV 394
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 104 (41.7 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 34/98 (34%), Positives = 52/98 (53%)
Query: 209 KKEI--IDDLIAFS-KSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLG--YDLY 263
KK++ I +L+ + + IG +G L+YGPPGTGK+ M A+AN G + L
Sbjct: 221 KKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLI 280
Query: 264 D----LELTAVKDNTELRKLL--IETSSKSIIVIEDID 295
+ + A + + LRK E +S SII I++ID
Sbjct: 281 NGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEID 318
Score = 74 (31.1 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 328 ERETNNSQV---TLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
+R+ N +V +S LL +DG+ + +++ TN +DPAL R GR D+ +++
Sbjct: 323 KRDKTNGEVERRVVSQLLTLMDGMKAR--SNVVVIAATNRPNSIDPALRRFGRFDREVDI 380
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 104 (41.7 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 34/98 (34%), Positives = 52/98 (53%)
Query: 209 KKEI--IDDLIAFS-KSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLG--YDLY 263
KK++ I +L+ + + IG +G L+YGPPGTGK+ M A+AN G + L
Sbjct: 221 KKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLI 280
Query: 264 D----LELTAVKDNTELRKLL--IETSSKSIIVIEDID 295
+ + A + + LRK E +S SII I++ID
Sbjct: 281 NGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEID 318
Score = 74 (31.1 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 328 ERETNNSQV---TLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
+R+ N +V +S LL +DG+ + +++ TN +DPAL R GR D+ +++
Sbjct: 323 KRDKTNGEVERRVVSQLLTLMDGMKAR--SNVVVIAATNRPNSIDPALRRFGRFDREVDI 380
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 90 (36.7 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 28/91 (30%), Positives = 45/91 (49%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
N Q T+ L+ +DG G ++F TN LDPAL+R GR+D+ +E S E
Sbjct: 304 NEVQRTMLELITQLDGFDPR--GNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEG 361
Query: 392 ----FKVLAKNYLNIESHNLFDKIGELLGEA 418
F++ +K +++E ++ I L A
Sbjct: 362 RANIFRIHSKT-MSVEKDIRWELISRLCPNA 391
Score = 82 (33.9 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 205 EPAEK-KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E EK +E+++ + E F ++G +G LLYGPPGTGK+ A+AN
Sbjct: 193 EQIEKLREVVE--LPLLSPERF-VKLGIDPPKGILLYGPPGTGKTLCARAVAN 242
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 129 (50.5 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 52/184 (28%), Positives = 84/184 (45%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL-- 265
E KE + +++ F + + ++G +G LL GPPGTGK+ + A+A + +
Sbjct: 164 EAKEELAEIVEFLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEAKVPFFSISG 223
Query: 266 ----ELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
E+ + +R + E K+ + ID +D G+ R
Sbjct: 224 SDFVEMFVGVGASRVRDMF-EQGKKNAPCLIFID-EIDAVGRHRGVGFGG---------- 271
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
G +ERE TL+ LL +DG + A G +I+ TN + LDPAL+R GR D+
Sbjct: 272 ---GNDEREQ-----TLNQLLVEMDG-FEANEGV-IIIAATNRPDVLDPALLRPGRFDRQ 321
Query: 382 IELS 385
I +S
Sbjct: 322 ITIS 325
>UNIPROTKB|A2VDN5 [details] [associations]
symbol:SPAST "Spastin" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0007109
"cytokinesis, completion of separation" evidence=ISS] [GO:0001578
"microtubule bundle formation" evidence=ISS] [GO:0051260 "protein
homooligomerization" evidence=ISS] [GO:0051013 "microtubule
severing" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0048487 "beta-tubulin binding" evidence=ISS]
[GO:0043014 "alpha-tubulin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005768 "endosome" evidence=ISS]
[GO:0030496 "midbody" evidence=ISS] [GO:0015630 "microtubule
cytoskeleton" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005815
"microtubule organizing center" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0016021 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0005819 GO:GO:0005768
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0030496 GO:GO:0007109
GO:GO:0048487 GO:GO:0008017 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 GO:GO:0043014 SMART:SM00745
GO:GO:0034214 GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146
KO:K13254 HAMAP:MF_03021 EMBL:BC133327 IPI:IPI00840116
RefSeq:NP_001075060.1 UniGene:Bt.46123 ProteinModelPortal:A2VDN5
SMR:A2VDN5 STRING:A2VDN5 Ensembl:ENSBTAT00000046919 GeneID:521442
KEGG:bta:521442 CTD:6683 HOVERGEN:HBG108502 InParanoid:A2VDN5
OMA:HKSTPKT OrthoDB:EOG4NZTTF NextBio:20873307 ArrayExpress:A2VDN5
Uniprot:A2VDN5
Length = 614
Score = 94 (38.1 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 31/108 (28%), Positives = 57/108 (52%)
Query: 199 FQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTM---IAAMA 255
F +A + K+ + + +I S + + + RA RG LL+GPPG GK+ + +AA +
Sbjct: 339 FDDIAGQELAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAES 397
Query: 256 NLLGYDLYDLELTA--VKDNTELRKLLIETSSK---SIIVIEDIDCSL 298
N +++ LT+ V + +L + L + + SII I+++D L
Sbjct: 398 NATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLL 445
Score = 81 (33.6 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 38/126 (30%), Positives = 60/126 (47%)
Query: 341 LLNFIDGLWSACGGERLIVF-TTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNY 399
L+ F DG+ SA G +R++V TN ++LD A++R R K + +S + E +L KN
Sbjct: 464 LIEF-DGVQSA-GDDRVLVMGATNRPQELDEAVLR--RFTKRVYVSLPNEETRLLLLKNL 519
Query: 400 LNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLN--QALELAKEEAR 457
L + L K EL A+MT L A + +R L Q ++ E R
Sbjct: 520 LCKQGSPLTQK--ELAQLARMTNGYSGSDLTALAKDAALG-PIRELKPEQVKNMSASEMR 576
Query: 458 RVKVDD 463
+++ D
Sbjct: 577 NIRLSD 582
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 126 (49.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 54/184 (29%), Positives = 89/184 (48%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN-----LLGYDL 262
E KE+I+ + K + + +G A +G +LYGPPGTGK+ + A+A+ +
Sbjct: 155 EIKEVIELPV---KHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTECKFIRVSG 211
Query: 263 YDLELTAVKDNTEL-RKLLI--ETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXX 319
+L + + + + R+L + + SII +++ID S+ G R
Sbjct: 212 SELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SI---GSSRVEGSSG-------- 259
Query: 320 PRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMD 379
G E Q T+ LLN +DG S+ + I+ TN ++ LDPAL+R GR+D
Sbjct: 260 -----GDSE-----VQRTMLELLNQLDGFESS--KDIKIIMATNRLDILDPALLRPGRID 307
Query: 380 KHIE 383
+ IE
Sbjct: 308 RKIE 311
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 126 (49.4 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 57/229 (24%), Positives = 99/229 (43%)
Query: 162 VSVLKEGREIKVRN---RMRKLYTNNGSNWVHVVFEHPATFQTLAMEPAEKKEI--IDDL 216
++ L G + +R + KL N V ++ T M K+I I ++
Sbjct: 115 INSLNTGARVALRADSYALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEV 174
Query: 217 IAFS-KSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVK-DNT 274
I K + + +G A +G LL+GPPGTGK+ + A+A + E T ++ +
Sbjct: 175 IELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVA-------HHTECTFIRVSGS 227
Query: 275 ELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNS 334
EL + I ++ ++ ++ R ++ +
Sbjct: 228 ELVQKFIGEGAR---MVREL-----FVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEV 279
Query: 335 QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
Q T+ LLN +DG + A ++I+ TN I+ LDPAL+R GR+D+ IE
Sbjct: 280 QRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDPALLRPGRIDRKIE 326
>RGD|1308494 [details] [associations]
symbol:Spast "spastin" species:10116 "Rattus norvegicus"
[GO:0001578 "microtubule bundle formation" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768
"endosome" evidence=ISO;ISS] [GO:0005783 "endoplasmic reticulum"
evidence=ISO;ISS] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA;ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO;ISS] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007109 "cytokinesis, completion of
separation" evidence=ISO;ISS] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=ISO;ISS] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA;ISO;ISS] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO;ISS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030496 "midbody" evidence=ISO;ISS] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA;ISO] [GO:0034214 "protein hexamerization"
evidence=ISO;ISS] [GO:0043014 "alpha-tubulin binding"
evidence=ISO;ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048487 "beta-tubulin binding" evidence=ISO;ISS]
[GO:0051013 "microtubule severing" evidence=ISO;ISS] [GO:0051260
"protein homooligomerization" evidence=ISO;ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 RGD:1308494 GO:GO:0005783 GO:GO:0016021 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0005768 GO:GO:0051260 GO:GO:0005815
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0006888
GO:GO:0007109 GO:GO:0048487 GO:GO:0008017 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 GO:GO:0005874 GO:GO:0043014
SMART:SM00745 GO:GO:0034214 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 EMBL:BC166846
IPI:IPI00365573 RefSeq:NP_001102172.2 UniGene:Rn.41645
ProteinModelPortal:B2RYN7 SMR:B2RYN7 STRING:B2RYN7 PRIDE:B2RYN7
GeneID:362700 KEGG:rno:362700 UCSC:RGD:1308494 NextBio:680920
ArrayExpress:B2RYN7 Genevestigator:B2RYN7 Uniprot:B2RYN7
Length = 581
Score = 94 (38.1 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 31/108 (28%), Positives = 57/108 (52%)
Query: 199 FQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTM---IAAMA 255
F +A + K+ + + +I S + + + RA RG LL+GPPG GK+ + +AA +
Sbjct: 306 FDDIAGQELAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAES 364
Query: 256 NLLGYDLYDLELTA--VKDNTELRKLLIETSSK---SIIVIEDIDCSL 298
N +++ LT+ V + +L + L + + SII I+++D L
Sbjct: 365 NATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLL 412
Score = 80 (33.2 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 38/126 (30%), Positives = 60/126 (47%)
Query: 341 LLNFIDGLWSACGGERLIVF-TTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNY 399
L+ F DG+ SA G +R++V TN ++LD A++R R K + +S + E +L KN
Sbjct: 431 LIEF-DGVQSA-GDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNL 486
Query: 400 LNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLN--QALELAKEEAR 457
L + L K EL A+MT L A + +R L Q ++ E R
Sbjct: 487 LCKQGSPLTQK--ELAQLARMTDGYSGSDLTALAKDAALG-PIRELKPEQVKNMSASEMR 543
Query: 458 RVKVDD 463
+++ D
Sbjct: 544 NIRLSD 549
>UNIPROTKB|F1M9D2 [details] [associations]
symbol:Spast "Spastin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 RGD:1308494 GO:GO:0005524 Pfam:PF04212 GO:GO:0008568
SMART:SM00745 GeneTree:ENSGT00570000078874 IPI:IPI00365573
Ensembl:ENSRNOT00000039375 ArrayExpress:F1M9D2 Uniprot:F1M9D2
Length = 581
Score = 94 (38.1 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 31/108 (28%), Positives = 57/108 (52%)
Query: 199 FQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTM---IAAMA 255
F +A + K+ + + +I S + + + RA RG LL+GPPG GK+ + +AA +
Sbjct: 306 FDDIAGQELAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAES 364
Query: 256 NLLGYDLYDLELTA--VKDNTELRKLLIETSSK---SIIVIEDIDCSL 298
N +++ LT+ V + +L + L + + SII I+++D L
Sbjct: 365 NATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLL 412
Score = 80 (33.2 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 38/126 (30%), Positives = 60/126 (47%)
Query: 341 LLNFIDGLWSACGGERLIVF-TTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNY 399
L+ F DG+ SA G +R++V TN ++LD A++R R K + +S + E +L KN
Sbjct: 431 LIEF-DGVQSA-GDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNL 486
Query: 400 LNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLN--QALELAKEEAR 457
L + L K EL A+MT L A + +R L Q ++ E R
Sbjct: 487 LCKQGSPLTQK--ELAQLARMTDGYSGSDLTALAKDAALG-PIRELKPEQVKNMSASEMR 543
Query: 458 RVKVDD 463
+++ D
Sbjct: 544 NIRLSD 549
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 102 (41.0 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 226 YARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLG--YDLYD----LELTAVKDNTELRKL 279
+ IG RG L+YGPPGTGK+ M A+AN G + L + + A + + LRK
Sbjct: 251 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKA 310
Query: 280 L--IETSSKSIIVIEDID 295
E +S +II I++ID
Sbjct: 311 FEEAEKNSPAIIFIDEID 328
Score = 75 (31.5 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 328 ERETNNSQV---TLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
+RE N +V +S LL +DG+ + +++ TN +DPAL R GR D+ +++
Sbjct: 333 KREKTNGEVERRVVSQLLTLMDGMKAR--SNVVVMAATNRPNSIDPALRRFGRFDREVDI 390
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 92 (37.4 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELS 385
N Q T+ L+ +DG + A G + ++F TN LDPAL+R GR+D+ IE S
Sbjct: 303 NEVQRTMLELITQLDG-FDARGNIK-VMFATNRPSTLDPALMRPGRIDRKIEFS 354
Score = 79 (32.9 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 205 EPAEK-KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E EK +E+++ + S + + +G +G LLYGPPGTGK+ A+AN
Sbjct: 192 EQIEKLREVVEMPLL---SPERFVNLGIDPPKGALLYGPPGTGKTLCARAVAN 241
>UNIPROTKB|D4A0I3 [details] [associations]
symbol:Spast "Spastin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
RGD:1308494 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005768 GO:GO:0051260 Pfam:PF04212 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 SMART:SM00745 GO:GO:0034214
OrthoDB:EOG4NZTTF IPI:IPI00947816 Ensembl:ENSRNOT00000068220
ArrayExpress:D4A0I3 Uniprot:D4A0I3
Length = 613
Score = 94 (38.1 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 31/108 (28%), Positives = 57/108 (52%)
Query: 199 FQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTM---IAAMA 255
F +A + K+ + + +I S + + + RA RG LL+GPPG GK+ + +AA +
Sbjct: 338 FDDIAGQELAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAES 396
Query: 256 NLLGYDLYDLELTA--VKDNTELRKLLIETSSK---SIIVIEDIDCSL 298
N +++ LT+ V + +L + L + + SII I+++D L
Sbjct: 397 NATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLL 444
Score = 80 (33.2 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 38/126 (30%), Positives = 60/126 (47%)
Query: 341 LLNFIDGLWSACGGERLIVF-TTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNY 399
L+ F DG+ SA G +R++V TN ++LD A++R R K + +S + E +L KN
Sbjct: 463 LIEF-DGVQSA-GDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNL 518
Query: 400 LNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLN--QALELAKEEAR 457
L + L K EL A+MT L A + +R L Q ++ E R
Sbjct: 519 LCKQGSPLTQK--ELAQLARMTDGYSGSDLTALAKDAALG-PIRELKPEQVKNMSASEMR 575
Query: 458 RVKVDD 463
+++ D
Sbjct: 576 NIRLSD 581
>MGI|MGI:1858896 [details] [associations]
symbol:Spast "spastin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768 "endosome"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007109
"cytokinesis, completion of separation" evidence=ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008017 "microtubule
binding" evidence=ISO] [GO:0008568 "microtubule-severing ATPase
activity" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=ISO] [GO:0034214 "protein hexamerization"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=ISO] [GO:0051013
"microtubule severing" evidence=ISO;IGI;IMP;IDA] [GO:0051260
"protein homooligomerization" evidence=ISO] [GO:0051301 "cell
division" evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1858896 GO:GO:0005783 GO:GO:0016021 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0005768 GO:GO:0051260 GO:GO:0005815
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0048487 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 OMA:HKSTPKT
OrthoDB:EOG4NZTTF EMBL:AK129282 EMBL:BC046286 EMBL:AK007793
EMBL:AJ246002 IPI:IPI00420580 RefSeq:NP_001156342.1
RefSeq:NP_058658.2 UniGene:Mm.19804 ProteinModelPortal:Q9QYY8
SMR:Q9QYY8 STRING:Q9QYY8 PhosphoSite:Q9QYY8 PaxDb:Q9QYY8
PRIDE:Q9QYY8 Ensembl:ENSMUST00000024869 GeneID:50850 KEGG:mmu:50850
UCSC:uc008dnz.2 InParanoid:Q9QYY8 NextBio:307827 Bgee:Q9QYY8
CleanEx:MM_SPAST Genevestigator:Q9QYY8
GermOnline:ENSMUSG00000024068 Uniprot:Q9QYY8
Length = 614
Score = 94 (38.1 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 31/108 (28%), Positives = 57/108 (52%)
Query: 199 FQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTM---IAAMA 255
F +A + K+ + + +I S + + + RA RG LL+GPPG GK+ + +AA +
Sbjct: 339 FDDIAGQELAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAES 397
Query: 256 NLLGYDLYDLELTA--VKDNTELRKLLIETSSK---SIIVIEDIDCSL 298
N +++ LT+ V + +L + L + + SII I+++D L
Sbjct: 398 NATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLL 445
Score = 80 (33.2 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 38/126 (30%), Positives = 60/126 (47%)
Query: 341 LLNFIDGLWSACGGERLIVF-TTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNY 399
L+ F DG+ SA G +R++V TN ++LD A++R R K + +S + E +L KN
Sbjct: 464 LIEF-DGVQSA-GDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNL 519
Query: 400 LNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLN--QALELAKEEAR 457
L + L K EL A+MT L A + +R L Q ++ E R
Sbjct: 520 LCKQGSPLTQK--ELAQLARMTDGYSGSDLTALAKDAALG-PIRELKPEQVKNMSASEMR 576
Query: 458 RVKVDD 463
+++ D
Sbjct: 577 NIRLSD 582
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 91 (37.1 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 42/151 (27%), Positives = 65/151 (43%)
Query: 324 LGKEERE-TNN--SQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDK 380
L KE TNN S ++ +L IDG+ I+ TN + LD AL R GR+DK
Sbjct: 1039 LAKERNSNTNNDASDRVINQILTEIDGINEK--KTIFIIAATNRPDILDKALTRPGRLDK 1096
Query: 381 HIELS----HCSYEAFKVLAKNY-LNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFP 435
I +S Y FK + KN LN E ++ D G + ++ + + +
Sbjct: 1097 LIYISLPDLKSRYSIFKAILKNTPLN-EDVDIHDMAKRTEGFSGADITNLCQSAVNEAIK 1155
Query: 436 ADVEF-SLRSLNQALELAKEEARRVKVDDKE 465
+ ++R Q E K+ K+DD +
Sbjct: 1156 ETIHLLNIRKKEQE-EQRKKNKNSFKIDDTD 1185
Score = 89 (36.4 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 31/98 (31%), Positives = 54/98 (55%)
Query: 209 KKEI--IDDLIAFS-KSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL 265
KK++ I +LI K + + IG + +G L++G PGTGK+++ A+AN Y +
Sbjct: 533 KKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYII 592
Query: 266 ---ELTAV---KDNTELRKLLIETSSKS--IIVIEDID 295
E+ + + +LRK+ + S K+ II I++ID
Sbjct: 593 NGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEID 630
Score = 86 (35.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 208 EKKEIIDDLIAFS-KSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E KE + + I + + + Y + + +G LLYGPPG GK+ + A+AN
Sbjct: 941 EVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIAN 990
Score = 44 (20.5 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 164 VLKEGREIKVRNRMRKLYTNNGSNWVHVVFEHPATFQTLAMEPAEKKEIIDDLI 217
+L++ K R ++ Y NN +N V+ H T + E K+ DD I
Sbjct: 170 ILEKVDYFKEREKITNSYNNNNNN-NKVIVTHDNKNHTNYINKVENKQS-DDKI 221
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 91 (37.1 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 42/151 (27%), Positives = 65/151 (43%)
Query: 324 LGKEERE-TNN--SQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDK 380
L KE TNN S ++ +L IDG+ I+ TN + LD AL R GR+DK
Sbjct: 1039 LAKERNSNTNNDASDRVINQILTEIDGINEK--KTIFIIAATNRPDILDKALTRPGRLDK 1096
Query: 381 HIELS----HCSYEAFKVLAKNY-LNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFP 435
I +S Y FK + KN LN E ++ D G + ++ + + +
Sbjct: 1097 LIYISLPDLKSRYSIFKAILKNTPLN-EDVDIHDMAKRTEGFSGADITNLCQSAVNEAIK 1155
Query: 436 ADVEF-SLRSLNQALELAKEEARRVKVDDKE 465
+ ++R Q E K+ K+DD +
Sbjct: 1156 ETIHLLNIRKKEQE-EQRKKNKNSFKIDDTD 1185
Score = 89 (36.4 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 31/98 (31%), Positives = 54/98 (55%)
Query: 209 KKEI--IDDLIAFS-KSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL 265
KK++ I +LI K + + IG + +G L++G PGTGK+++ A+AN Y +
Sbjct: 533 KKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYII 592
Query: 266 ---ELTAV---KDNTELRKLLIETSSKS--IIVIEDID 295
E+ + + +LRK+ + S K+ II I++ID
Sbjct: 593 NGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEID 630
Score = 86 (35.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 208 EKKEIIDDLIAFS-KSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E KE + + I + + + Y + + +G LLYGPPG GK+ + A+AN
Sbjct: 941 EVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIAN 990
Score = 44 (20.5 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 164 VLKEGREIKVRNRMRKLYTNNGSNWVHVVFEHPATFQTLAMEPAEKKEIIDDLI 217
+L++ K R ++ Y NN +N V+ H T + E K+ DD I
Sbjct: 170 ILEKVDYFKEREKITNSYNNNNNN-NKVIVTHDNKNHTNYINKVENKQS-DDKI 221
>UNIPROTKB|Q9UBP0 [details] [associations]
symbol:SPAST "Spastin" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IPI] [GO:0008568
"microtubule-severing ATPase activity" evidence=IDA] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0043014 "alpha-tubulin
binding" evidence=IPI] [GO:0051013 "microtubule severing"
evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0034214 "protein hexamerization" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0007109 "cytokinesis,
completion of separation" evidence=IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0001578 "microtubule
bundle formation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0030496 "midbody" evidence=IDA] [GO:0031410 "cytoplasmic
vesicle" evidence=IDA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 EMBL:CH471053 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0008219 GO:GO:0005768 GO:GO:0051260
GO:GO:0031410 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0007109 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
SMART:SM00745 PDB:3EAB PDBsum:3EAB GO:GO:0034214
HOGENOM:HOG000225146 KO:K13254 HAMAP:MF_03021 CTD:6683
HOVERGEN:HBG108502 OMA:HKSTPKT OrthoDB:EOG4NZTTF EMBL:AJ246001
EMBL:AJ246003 EMBL:AB029006 EMBL:BC150260 IPI:IPI00002707
IPI:IPI00219816 IPI:IPI00923524 IPI:IPI00923553 RefSeq:NP_055761.2
RefSeq:NP_955468.1 UniGene:Hs.468091 PDB:3VFD PDBsum:3VFD
ProteinModelPortal:Q9UBP0 SMR:Q9UBP0 IntAct:Q9UBP0 STRING:Q9UBP0
PhosphoSite:Q9UBP0 DMDM:12230611 PaxDb:Q9UBP0 PeptideAtlas:Q9UBP0
PRIDE:Q9UBP0 Ensembl:ENST00000315285 Ensembl:ENST00000345662
GeneID:6683 KEGG:hsa:6683 UCSC:uc002roc.3 GeneCards:GC02P032288
HGNC:HGNC:11233 HPA:HPA017311 MIM:182601 MIM:604277
neXtProt:NX_Q9UBP0 Orphanet:100985 PharmGKB:PA36063
InParanoid:Q9UBP0 PhylomeDB:Q9UBP0 ChiTaRS:SPAST
EvolutionaryTrace:Q9UBP0 GenomeRNAi:6683 NextBio:26047
ArrayExpress:Q9UBP0 Bgee:Q9UBP0 CleanEx:HS_SPAST
Genevestigator:Q9UBP0 Uniprot:Q9UBP0
Length = 616
Score = 94 (38.1 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 31/108 (28%), Positives = 57/108 (52%)
Query: 199 FQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTM---IAAMA 255
F +A + K+ + + +I S + + + RA RG LL+GPPG GK+ + +AA +
Sbjct: 341 FDDIAGQDLAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAES 399
Query: 256 NLLGYDLYDLELTA--VKDNTELRKLLIETSSK---SIIVIEDIDCSL 298
N +++ LT+ V + +L + L + + SII I+++D L
Sbjct: 400 NATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLL 447
Score = 80 (33.2 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 38/126 (30%), Positives = 60/126 (47%)
Query: 341 LLNFIDGLWSACGGERLIVF-TTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNY 399
L+ F DG+ SA G +R++V TN ++LD A++R R K + +S + E +L KN
Sbjct: 466 LIEF-DGVQSA-GDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNL 521
Query: 400 LNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLN--QALELAKEEAR 457
L + L K EL A+MT L A + +R L Q ++ E R
Sbjct: 522 LCKQGSPLTQK--ELAQLARMTDGYSGSDLTALAKDAALG-PIRELKPEQVKNMSASEMR 578
Query: 458 RVKVDD 463
+++ D
Sbjct: 579 NIRLSD 584
>UNIPROTKB|F1PR99 [details] [associations]
symbol:SPAST "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0043014
"alpha-tubulin binding" evidence=IEA] [GO:0034214 "protein
hexamerization" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0007109 "cytokinesis,
completion of separation" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001578 "microtubule bundle formation"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 GO:GO:0005634 GO:GO:0005768 GO:GO:0051260
Pfam:PF04212 GO:GO:0006888 GO:GO:0030496 GO:GO:0007109
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
SMART:SM00745 GO:GO:0034214 GeneTree:ENSGT00570000078874 KO:K13254
CTD:6683 OMA:HKSTPKT EMBL:AAEX03010834 RefSeq:XP_850973.1
Ensembl:ENSCAFT00000009227 GeneID:608582 KEGG:cfa:608582
Uniprot:F1PR99
Length = 624
Score = 94 (38.1 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 31/108 (28%), Positives = 57/108 (52%)
Query: 199 FQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTM---IAAMA 255
F +A + K+ + + +I S + + + RA RG LL+GPPG GK+ + +AA +
Sbjct: 349 FDDIAGQELAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAES 407
Query: 256 NLLGYDLYDLELTA--VKDNTELRKLLIETSSK---SIIVIEDIDCSL 298
N +++ LT+ V + +L + L + + SII I+++D L
Sbjct: 408 NATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLL 455
Score = 80 (33.2 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 38/126 (30%), Positives = 60/126 (47%)
Query: 341 LLNFIDGLWSACGGERLIVF-TTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLAKNY 399
L+ F DG+ SA G +R++V TN ++LD A++R R K + +S + E +L KN
Sbjct: 474 LIEF-DGVQSA-GDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNL 529
Query: 400 LNIESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPADVEFSLRSLN--QALELAKEEAR 457
L + L K EL A+MT L A + +R L Q ++ E R
Sbjct: 530 LCKQGSPLTQK--ELAQLARMTDGYSGSDLTALAKDAALG-PIRELKPEQVKNMSASEMR 586
Query: 458 RVKVDD 463
+++ D
Sbjct: 587 NIRLSD 592
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 94 (38.1 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
N Q T+ L+N +DG G ++ TN + LDPAL+R GR+D+ +E +
Sbjct: 293 NEVQRTMLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDG 350
Query: 392 ----FKVLAKNYLNIESHNLFDKIGEL 414
FK+ A++ +++E FD + L
Sbjct: 351 RSHIFKIHARS-MSVERDIRFDLLARL 376
Score = 76 (31.8 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 205 EPAEK-KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
E EK +E+++ + + + +G +G LL+GPPGTGK+ A+AN
Sbjct: 182 EQIEKLREVVETPLLHPEK---FVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 94 (38.1 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 341 LLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA-FKVLAKNY 399
LL +DG+ +A G+ +++ TN +DPAL R GR D+ +E+ +A F +L K +
Sbjct: 370 LLTLMDGMGAA--GKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQF 427
Query: 400 LNIES 404
+ S
Sbjct: 428 SRMSS 432
Score = 94 (38.1 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 30/93 (32%), Positives = 47/93 (50%)
Query: 326 KEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELS 385
++ T+ + L+ LLN IDG+ G +IV TN +++D AL+R GR+D+HI +
Sbjct: 625 RDGSSTSAANHVLTSLLNEIDGVEELKGV--VIVAATNRPDEIDAALLRPGRLDRHIYVG 682
Query: 386 ----HCSYEAFKVLAKNYLNIES----HNLFDK 410
+ E K K + ES H L D+
Sbjct: 683 PPDVNARLEILKKCTKKFNTEESGVDLHELADR 715
Score = 82 (33.9 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 226 YARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDN----TE--LRKL 279
++ G + RG LL+GPPGTGK+ ++ +AN + + ++ TE LR +
Sbjct: 271 FSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDI 330
Query: 280 LIETSS--KSIIVIEDID 295
E SII I++ID
Sbjct: 331 FNEARKYQPSIIFIDEID 348
Score = 82 (33.9 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 210 KEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTA 269
KE+I + SE F AR+G + +G LLYGPPG K+ A+A G + ++
Sbjct: 529 KEMIQ--LPLEASETF-ARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPE 585
Query: 270 V------KDNTELRKLL--IETSSKSIIVIEDIDC-SLDLTG 302
+ + +R++ +++ SII ++ID S D G
Sbjct: 586 IFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDG 627
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 102 (41.0 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 226 YARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLG--YDLYD----LELTAVKDNTELRKL 279
+ IG RG L+YGPPGTGK+ M A+AN G + L + + A + + LRK
Sbjct: 250 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKA 309
Query: 280 L--IETSSKSIIVIEDID 295
E +S +II I++ID
Sbjct: 310 FEEAEKNSPAIIFIDEID 327
Score = 74 (31.1 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 328 ERETNNSQV---TLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
+RE N +V +S LL +DG+ + +++ TN +DPAL R GR D+ +++
Sbjct: 332 KREKTNGEVERRVVSQLLTLMDGMKAR--SNVVVMAATNRPNSIDPALRRFGRFDREVDV 389
Score = 68 (29.0 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 325 GKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIEL 384
G ++ ++ LL +DG+ S ++ TN +++DPAL+R GR+D+ I +
Sbjct: 607 GASAGDSGGGDRVVNQLLTEMDGVNSK--KNVFVIGATNRPDQIDPALMRPGRLDQLIYV 664
Query: 385 SHCSYEA-FKVL 395
EA F +L
Sbjct: 665 PLPDEEARFSIL 676
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 88 (36.0 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE--LSHCSY 389
N Q T+ L+N +DG G ++ TN + LDPAL+R GR+D+ +E L +
Sbjct: 295 NEVQRTMLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAG 352
Query: 390 EA--FKVLAKNYLNIESHNLFDKIGEL 414
A K+ AK +++E +D + L
Sbjct: 353 RAHILKIHAKQ-MSVERDIRYDLLARL 378
Score = 82 (33.9 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 226 YARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
Y +G +G LLYGPPGTGK+ A+AN
Sbjct: 203 YVNLGIEPPKGVLLYGPPGTGKTLCARAVAN 233
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 88 (36.0 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE--LSHCSY 389
N Q T+ L+N +DG G ++ TN + LDPAL+R GR+D+ +E L +
Sbjct: 295 NEVQRTMLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAG 352
Query: 390 EA--FKVLAKNYLNIESHNLFDKIGEL 414
A K+ AK +++E +D + L
Sbjct: 353 RAHILKIHAKQ-MSVERDIRYDLLARL 378
Score = 82 (33.9 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 226 YARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
Y +G +G LLYGPPGTGK+ A+AN
Sbjct: 203 YVNLGIEPPKGVLLYGPPGTGKTLCARAVAN 233
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 131 (51.2 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 54/215 (25%), Positives = 97/215 (45%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLEL 267
E KE +++++ F K+ D Y R+G RG LL G PGTGK+ + A+A D+ +
Sbjct: 336 EAKEELEEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAG--ESDVPFISC 393
Query: 268 TAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKE 327
+A +E +L + + + D+ ++ + + GK
Sbjct: 394 SA----SEFVELYVGMGASRV---RDL-----FARAKKEAPSIIFIDEIDAVAKSRDGKF 441
Query: 328 ERETNNS-QVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSH 386
+N+ + TL+ LL +DG S+ +++ TN + LDPAL R GR D+ + +
Sbjct: 442 RMVSNDEREQTLNQLLTEMDGFDSSSAV--IVLGATNRADVLDPALRRPGRFDRVVTVES 499
Query: 387 CSYEAFKVLAKNYLNIESHNLFDKIGELLGEAKMT 421
+ + K +++ + L D + L A MT
Sbjct: 500 PDKVGRESILKVHVSKKELPLGDDVN-LASIASMT 533
Score = 43 (20.2 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 16/66 (24%), Positives = 30/66 (45%)
Query: 64 MRSEAYSAIENYLSSKSSTQAKRLKADIIKNSSQSLVLSMDDHEEVADEFQGIK-----L 118
+ E ++ + + S K ST + R + + ++ S + E ++ +G K L
Sbjct: 65 INQERFNLWQGF-SRKKSTSSSRTIVNCQEGDQKA---SSSEGEGKTNKDKGRKQGKNEL 120
Query: 119 WWSSGK 124
WWS GK
Sbjct: 121 WWSKGK 126
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 98 (39.6 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL-- 265
E + +++++ F K Y +G +G LL GPPGTGK+ + A A G D + +
Sbjct: 288 EARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGEAGVDFFFMSG 347
Query: 266 -ELTAVKDNT---ELRKLLIETSSKS--IIVIEDID 295
E V +R L + S++ II I+++D
Sbjct: 348 SEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELD 383
Score = 77 (32.2 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 325 GKEE-RETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
GK ++ ++ TL+ LL +DG G +I+ TN+ E LD AL R GR DK +
Sbjct: 387 GKRNPKDQAYAKQTLNQLLVELDGFSQTSG--IIIIGATNFPEALDKALTRPGRFDKVVN 444
Query: 384 L 384
+
Sbjct: 445 V 445
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 125 (49.1 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 53/167 (31%), Positives = 75/167 (44%)
Query: 224 DFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDL---ELTA--VKDNTEL-R 277
+ Y +G +G +LYG PGTGK+ + A+AN + EL + D L R
Sbjct: 215 ELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVR 274
Query: 278 KLL--IETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEERETNNSQ 335
+L E S SI+ I++ID G +R ERE Q
Sbjct: 275 QLFNAAEEHSPSIVFIDEIDA----IGTKRYDAQSGA---------------EREI---Q 312
Query: 336 VTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHI 382
T+ LLN +DG + + ++ TN I LDPALIR GR+D+ I
Sbjct: 313 RTMLELLNQLDG-FDTSQRDIKVIMATNRISDLDPALIRPGRIDRKI 358
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 49/182 (26%), Positives = 79/182 (43%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYD 261
L M+ E KE ++ + + E Y +IG G L+YGPPGTGK+ ++ A+AN
Sbjct: 143 LDMQKQEMKEAVE--LPLTCPE-LYEKIGIEPPMGILIYGPPGTGKTMLVKAVANET--- 196
Query: 262 LYDLELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
+ V + ++K L E ++ D+ L R
Sbjct: 197 --QVTFIGVVGSEFVQKYLGEGPR----MVRDV---FRLA--RENSPSIIFIDEVDAIAT 245
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
++ + Q L LLN +DG + + ++ TN + LDPAL+R GR+D+
Sbjct: 246 KRFDAQTGADREVQRILLELLNQMDGFDKSTNVK--VIMATNRADTLDPALLRPGRLDRK 303
Query: 382 IE 383
IE
Sbjct: 304 IE 305
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 49/182 (26%), Positives = 79/182 (43%)
Query: 202 LAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYD 261
L M+ E KE ++ + + E Y +IG G L+YGPPGTGK+ ++ A+AN
Sbjct: 143 LDMQKQEMKEAVE--LPLTCPE-LYEKIGIEPPMGILIYGPPGTGKTMLVKAVANET--- 196
Query: 262 LYDLELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPR 321
+ V + ++K L E ++ D+ L R
Sbjct: 197 --QVTFIGVVGSEFVQKYLGEGPR----MVRDV---FRLA--RENSPSIIFIDEVDAIAT 245
Query: 322 QKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKH 381
++ + Q L LLN +DG + + ++ TN + LDPAL+R GR+D+
Sbjct: 246 KRFDAQTGADREVQRILLELLNQMDGFDKSTNVK--VIMATNRADTLDPALLRPGRLDRK 303
Query: 382 IE 383
IE
Sbjct: 304 IE 305
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 52/188 (27%), Positives = 87/188 (46%)
Query: 212 IIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMI---AAMANLLGYDLYDLELT 268
+++ ++ ++ + +G +G L+YGPPGTGK+ + AA L +L
Sbjct: 215 LVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLV 274
Query: 269 A--VKDNTELRK---LLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQK 323
+ D +L + L + + SII I++ LD G +R +K
Sbjct: 275 QMFIGDGAKLVRDAFALAKEKAPSIIFIDE----LDAIGTKRFDS-------------EK 317
Query: 324 LGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIE 383
G +RE Q T+ LLN +DG + ++ TN ++ LDPAL+R GR+D+ IE
Sbjct: 318 AG--DREV---QRTMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRKIE 370
Query: 384 LSHCSYEA 391
+ EA
Sbjct: 371 FPMPNEEA 378
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 96 (38.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 31/105 (29%), Positives = 50/105 (47%)
Query: 199 FQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLL 258
F+ + A KE+ LI E Y +G RG LL+GPPG GK+ + A+A L
Sbjct: 258 FEDVGGNDATLKEVCKMLIHMRHPE-VYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGEL 316
Query: 259 GYDLYDLELTAV------KDNTELRKLLIETSSKS--IIVIEDID 295
+ + T V + +LR+L + S + ++ I++ID
Sbjct: 317 DLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEID 361
Score = 80 (33.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 326 KEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDK 380
+ +RET S ++ LL +DGL + + I+ TN + +DPA++R GR+DK
Sbjct: 684 RSDRETGASVRVVNQLLTEMDGLEAR--QQVFIMAATNRPDIIDPAILRPGRLDK 736
Score = 72 (30.4 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 320 PRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVF-TTNYIEKLDPALIRKGRM 378
P++++ ++ E ++ LL +D L + R++V TN + LDPAL R GR
Sbjct: 365 PKREVASKDMERR----IVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRF 420
Query: 379 DKHI 382
D+ I
Sbjct: 421 DREI 424
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 96 (38.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 31/105 (29%), Positives = 50/105 (47%)
Query: 199 FQTLAMEPAEKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLL 258
F+ + A KE+ LI E Y +G RG LL+GPPG GK+ + A+A L
Sbjct: 258 FEDVGGNDATLKEVCKMLIHMRHPE-VYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGEL 316
Query: 259 GYDLYDLELTAV------KDNTELRKLLIETSSKS--IIVIEDID 295
+ + T V + +LR+L + S + ++ I++ID
Sbjct: 317 DLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEID 361
Score = 80 (33.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 326 KEERETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDK 380
+ +RET S ++ LL +DGL + + I+ TN + +DPA++R GR+DK
Sbjct: 689 RSDRETGASVRVVNQLLTEMDGLEAR--QQVFIMAATNRPDIIDPAILRPGRLDK 741
Score = 72 (30.4 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 320 PRQKLGKEERETNNSQVTLSGLLNFIDGLWSACGGERLIVF-TTNYIEKLDPALIRKGRM 378
P++++ ++ E ++ LL +D L + R++V TN + LDPAL R GR
Sbjct: 365 PKREVASKDMERR----IVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRF 420
Query: 379 DKHI 382
D+ I
Sbjct: 421 DREI 424
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 88 (36.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 332 NNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEA 391
N Q T+ L+ +DG G ++F TN LDPAL+R GR+D+ +E S E
Sbjct: 327 NEVQRTMLELITQLDGFDPR--GNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEG 384
Query: 392 ----FKVLAKNYLNIESHNLFDKIGEL 414
F++ +K+ +++E ++ I L
Sbjct: 385 RANIFRIHSKS-MSVERGIRWELISRL 410
Score = 82 (33.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 222 SEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMAN 256
S + +A +G +G LLYGPPGTGK+ A+AN
Sbjct: 231 SPERFATLGIDPPKGILLYGPPGTGKTLCARAVAN 265
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 97 (39.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 208 EKKEIIDDLIAFSKSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMA 255
E K +++++ + K + Y+R+G +G LL GPPGTGK+ + A+A
Sbjct: 255 EAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIA 302
Score = 77 (32.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 35/139 (25%), Positives = 62/139 (44%)
Query: 337 TLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDKHIELSHCSYEAFKVLA 396
T++ LL+ +DG G +++ TN ++ LD AL+R GR D + + +
Sbjct: 368 TINQLLSEMDGFTRNEG--IIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIF 425
Query: 397 KNYLN--IESHNLFDKIGELLGEAKMTPADVAEHLMPKTFPA--D--VEFSLRSLNQALE 450
YL+ + S + K+ G T AD+ + A D VE ++ L++A +
Sbjct: 426 NFYLSKIVHSGGIDPKV-LAKGSTGFTGADIENMVNQAALKAATDNAVEVTMAYLDEARD 484
Query: 451 LAKEEARRV--KVDDKEAN 467
R ++ D+EAN
Sbjct: 485 RVLMGPARTGGRIPDEEAN 503
>DICTYBASE|DDB_G0272777 [details] [associations]
symbol:DDB_G0272777 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0272777 GO:GO:0005524 EMBL:AAFI02000008
eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_644963.1
ProteinModelPortal:Q86B10 EnsemblProtists:DDB0305119 GeneID:8618641
KEGG:ddi:DDB_G0272777 OMA:ITRAGRI Uniprot:Q86B10
Length = 738
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 54/207 (26%), Positives = 88/207 (42%)
Query: 210 KEIIDDLIAFS-KSEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELT 268
KE LI + K +D + R+ G LL+GP G GKS M+ A+A + +
Sbjct: 495 KERFRQLIEWPLKYQDTFKRLSLNNSSGLLLHGPSGCGKSLMVKAIATEMS-----INFI 549
Query: 269 AVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRXXXXXXXXXXXXXXPRQKLGKEE 328
++K + K L E+ +I D+ S L+ R G +
Sbjct: 550 SIKGSDIYSKWLGESER----IIRDLFKSARLSSP---CIMFFDEIDSLTLSRGS-GDDN 601
Query: 329 RETNNSQVTLSGLLNFIDGLWSACGGERLIVFTTNYIEKLDPALIRKGRMDK--HIELSH 386
+ S+ LS LLN +DG+ + ++ TN I+ +D AL+R GR + HI+L
Sbjct: 602 EDGGTSKRILSQLLNEMDGI--QVKSQIFLIGCTNSIQSIDSALLRPGRFESLIHIDLPS 659
Query: 387 CS--YEAFKVLAKNYLNIESHNLFDKI 411
+ VL+ N LN + ++
Sbjct: 660 LDDRLDILNVLSTNSLNFNKDEITQQV 686
WARNING: HSPs involving 61 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 482 453 0.00093 118 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 311
No. of states in DFA: 614 (65 KB)
Total size of DFA: 275 KB (2145 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.16u 0.25s 39.41t Elapsed: 00:00:02
Total cpu time: 39.20u 0.26s 39.46t Elapsed: 00:00:02
Start: Tue May 21 09:59:12 2013 End: Tue May 21 09:59:14 2013
WARNINGS ISSUED: 2