Query 011576
Match_columns 482
No_of_seqs 299 out of 1898
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 02:54:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011576.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011576hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0708 XthA Exonuclease III [ 100.0 3.3E-53 7.1E-58 410.0 19.7 252 1-324 1-260 (261)
2 PRK13911 exodeoxyribonuclease 100.0 2.7E-49 5.9E-54 387.8 23.9 244 1-323 1-249 (250)
3 PRK11756 exonuclease III; Prov 100.0 7.1E-43 1.5E-47 346.3 24.0 252 1-325 1-268 (268)
4 TIGR00195 exoDNase_III exodeox 100.0 8.2E-41 1.8E-45 328.9 23.1 249 1-323 1-254 (254)
5 TIGR00633 xth exodeoxyribonucl 100.0 5.8E-38 1.3E-42 307.4 24.3 248 1-323 1-254 (255)
6 PRK05421 hypothetical protein; 99.9 8.4E-21 1.8E-25 188.0 20.6 213 1-326 44-262 (263)
7 KOG1294 Apurinic/apyrimidinic 99.8 1.2E-20 2.5E-25 190.2 12.2 253 2-324 65-334 (335)
8 COG3568 ElsH Metal-dependent h 99.8 2E-17 4.4E-22 160.5 17.1 233 1-326 10-258 (259)
9 KOG3873 Sphingomyelinase famil 99.7 1.6E-17 3.4E-22 164.5 12.5 276 1-346 9-313 (422)
10 TIGR03395 sphingomy sphingomye 99.7 5.3E-16 1.2E-20 155.2 21.4 214 1-266 1-245 (283)
11 PF03372 Exo_endo_phos: Endonu 99.7 9.6E-17 2.1E-21 152.9 13.7 76 4-82 1-83 (249)
12 PLN03144 Carbon catabolite rep 99.7 9.8E-16 2.1E-20 165.5 20.3 181 1-194 255-470 (606)
13 PTZ00297 pantothenate kinase; 99.7 2.2E-15 4.9E-20 177.2 23.2 263 1-326 11-315 (1452)
14 KOG2756 Predicted Mg2+-depende 99.6 1.6E-14 3.6E-19 138.0 13.4 198 2-263 101-309 (349)
15 PRK15251 cytolethal distending 99.6 1.9E-13 4E-18 134.0 18.0 150 1-194 25-199 (271)
16 KOG2338 Transcriptional effect 99.5 1.8E-12 3.8E-17 134.3 17.5 163 1-194 117-307 (495)
17 COG3021 Uncharacterized protei 99.4 1.5E-12 3.3E-17 128.8 12.4 215 2-326 90-308 (309)
18 PF14529 Exo_endo_phos_2: Endo 99.4 9.9E-13 2.2E-17 113.4 8.9 100 140-268 1-100 (119)
19 smart00476 DNaseIc deoxyribonu 99.2 3E-10 6.6E-15 112.8 17.3 76 1-82 18-104 (276)
20 COG5239 CCR4 mRNA deadenylase, 99.0 1.2E-08 2.6E-13 102.2 15.5 81 1-81 31-131 (378)
21 smart00128 IPPc Inositol polyp 99.0 2.7E-08 5.9E-13 101.0 17.9 157 2-193 6-195 (310)
22 KOG1294 Apurinic/apyrimidinic 98.8 3.5E-08 7.6E-13 100.1 10.5 182 123-355 6-189 (335)
23 KOG0620 Glucose-repressible al 98.7 4.7E-08 1E-12 100.6 9.2 86 1-88 20-121 (361)
24 KOG0566 Inositol-1,4,5-triphos 98.2 1.9E-05 4.1E-10 87.5 13.8 51 138-192 673-727 (1080)
25 COG2374 Predicted extracellula 97.8 0.00045 9.7E-09 75.7 14.2 84 159-269 652-737 (798)
26 PLN03191 Type I inositol-1,4,5 96.0 0.1 2.2E-06 56.9 13.2 17 311-327 577-593 (621)
27 COG5411 Phosphatidylinositol 5 91.1 0.35 7.5E-06 50.7 5.3 51 138-192 165-219 (460)
28 PTZ00312 inositol-1,4,5-tripho 80.1 4.6 0.0001 40.5 6.4 56 138-193 80-142 (356)
29 PLN03191 Type I inositol-1,4,5 73.0 2.9 6.3E-05 45.9 3.1 36 2-39 111-149 (621)
30 KOG1976 Inositol polyphosphate 36.3 77 0.0017 32.2 5.6 58 137-194 168-232 (391)
No 1
>COG0708 XthA Exonuclease III [DNA replication, recombination, and repair]
Probab=100.00 E-value=3.3e-53 Score=410.05 Aligned_cols=252 Identities=37% Similarity=0.659 Sum_probs=221.0
Q ss_pred CEEEEeeccCccccccccchHHHHHhhcCCcEEEEecccccccchhhHHHhhcCCcEEEeecccCCCCCCcceEEEEEEe
Q 011576 1 MKIVTYNVNGLRQRVSQFGSLRKLLDSFDADIICFQETKLRRQELKSDLVMADGYESFFSCTRTSDKGRTGYSGVATFCR 80 (482)
Q Consensus 1 mrIlTwNVnGl~~~~~r~~~l~~~L~~~~pDII~LQEtk~~~~~l~~~l~~~~gY~~~~s~~~~~~~g~~g~~GVAIlsR 80 (482)
|||+||||||+|.++++ +.++|.+.+||||||||||+..+.++...+...||+.++.. |.+||+||||++|
T Consensus 1 mkI~SwNVNgiRar~~~---~~~~l~~~~pDVlclQEtK~~~~~fp~~~~~~~GY~~~~~~------gqKgysGVailsr 71 (261)
T COG0708 1 MKIASWNVNGLRARLKK---LLDWLEEEQPDVLCLQETKAQDEQFPREELEALGYHHVFNH------GQKGYSGVAILSK 71 (261)
T ss_pred CeeEEEehhhHHHHHHH---HHHHHHHhCCCEEEEEecccCcccCCHhHHhhCCceEEEec------CcCCcceEEEEEc
Confidence 89999999999999987 99999999999999999999998888777778999776663 5689999999999
Q ss_pred ccCCCCCcccccceeeeecccccccccCcccccCccccccccccccCCCCCEEEEeeCeEEEEEEEecCCCCCChhhHHH
Q 011576 81 VKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGRCVITDHGHFILFNVYGPRADSEDTVRIQF 160 (482)
Q Consensus 81 ~~~~f~~~~~~~pi~v~~g~~g~~~~~~p~~~~gl~~~~~~~~~~~D~eGR~i~v~~~~~~l~nvY~P~~~~~~~~r~~~ 160 (482)
.+ |..+..|+.+. ...|.+||+|.+.++.|.|+|+|+|++...+.+++.+
T Consensus 72 ~~----------~~~v~~g~~~~--------------------~~~d~e~R~I~a~~~~~~v~~~Y~PnG~~~~~~k~~y 121 (261)
T COG0708 72 KP----------PDDVRRGFPGE--------------------EEDDEEGRVIEAEFDGFRVINLYFPNGSSIGLEKFDY 121 (261)
T ss_pred cC----------chhhhcCCCCC--------------------ccccccCcEEEEEECCEEEEEEEcCCCCCCCCcchHH
Confidence 84 45666666431 1257899999999999999999999999756788999
Q ss_pred HHHHHHHHHHHHHHHHhCCCeEEEecCCCCCCCcccccCC--------CCCCCchHHHHHHHHHHHHcCCCccccccccC
Q 011576 161 KLQFFHVLQKRWEFLLCQGRRIFVVGDLNIAPAAIDRCDA--------GPDFAKNEFRIWFRSMLVESGGSFFDVFRSKH 232 (482)
Q Consensus 161 k~~fl~~L~~~i~~l~~~~~pvII~GDFN~~~~~~D~~~~--------~~~~~~~~~r~~l~~ll~~~g~~L~Dv~R~~~ 232 (482)
|++|++.|..+++++...+.|+|||||||++|.++|..++ .++|.++| |.||+.++. .| |+|+||.+|
T Consensus 122 Kl~f~~~l~~~l~~l~~~~~~~vl~GD~NIap~~iDv~~~~~~~~n~~~~~f~~ee-R~~~~~ll~-~G--~~D~~R~~~ 197 (261)
T COG0708 122 KLRFLDALRNYLEELLKKGKPVVLCGDFNIAPEEIDVANPKKRWLNEGNSGFLPEE-RAWFRRLLN-AG--FVDTFRLFH 197 (261)
T ss_pred HHHHHHHHHHHHHHHhhcCCCEEEecccccCCchhcccCchhhhhcCCCCCCCHHH-HHHHHHHHH-cc--hhhhhHhhC
Confidence 9999999999999999999999999999999999887655 25677777 999999984 44 999999999
Q ss_pred CCCCCccccCCCCCCCcccCCcceEEEEEEcCCCccccccccccccccceeeeeeeeeccccCCCCCCCCccCCCCcCCC
Q 011576 233 PERREAYTCWPSNTGAEQFNYGTRIDHILCAGPCLHQKHDLQSHNFVTCHVNECDILIDYKRWKPGNAPRWKGGMSTRLE 312 (482)
Q Consensus 233 P~~~~~yT~~s~~~~~~~~n~gsRID~Ilvs~~~l~~~~~l~~~~~~~~~V~~~~I~~~~~~~~~~~~~~w~~~~~~~~~ 312 (482)
|+.+. ||||+++.++++.|.|.||||+|+|+.+.. ++++|.|+.+.++|. .
T Consensus 198 p~~~~-YTwW~YR~~~~~~n~G~RID~~l~S~~L~~-------------~~~~a~I~~~~rg~e---------------~ 248 (261)
T COG0708 198 PEPEK-YTWWDYRANAARRNRGWRIDYILVSPALAD-------------RLKDAGIDREVRGWE---------------K 248 (261)
T ss_pred CCCCc-ccccccccchhhhcCceeEEEEEeCHHHHH-------------HHHhcCccHHHhcCC---------------C
Confidence 99876 999999999888889999999999999855 899999998876554 6
Q ss_pred CCCCcceEEEEe
Q 011576 313 GSDHAPVYMCLG 324 (482)
Q Consensus 313 ~SDH~PV~~~l~ 324 (482)
+||||||.++|.
T Consensus 249 pSDHaPV~~e~~ 260 (261)
T COG0708 249 PSDHAPVWVELD 260 (261)
T ss_pred CCCcCcEEEEec
Confidence 799999999986
No 2
>PRK13911 exodeoxyribonuclease III; Provisional
Probab=100.00 E-value=2.7e-49 Score=387.84 Aligned_cols=244 Identities=34% Similarity=0.610 Sum_probs=206.6
Q ss_pred CEEEEeeccCccccccccchHHHHHhhcCCcEEEEecccccccchhhHHHhhcCCcEEEeecccCCCCCCcceEEEEEEe
Q 011576 1 MKIVTYNVNGLRQRVSQFGSLRKLLDSFDADIICFQETKLRRQELKSDLVMADGYESFFSCTRTSDKGRTGYSGVATFCR 80 (482)
Q Consensus 1 mrIlTwNVnGl~~~~~r~~~l~~~L~~~~pDII~LQEtk~~~~~l~~~l~~~~gY~~~~s~~~~~~~g~~g~~GVAIlsR 80 (482)
|||+|||||||+++.++ .+.++|++++||||||||||++...+. ....||..++.+. +++||+||||++|
T Consensus 1 mki~swNVNgir~~~~~--~~~~~l~~~~~DIiclQEtK~~~~~~~---~~~~gY~~~~~~~-----~~kgy~GVAi~~k 70 (250)
T PRK13911 1 MKLISWNVNGLRACMTK--GFMDFFNSVDADVFCIQESKMQQEQNT---FEFKGYFDFWNCA-----IKKGYSGVVTFTK 70 (250)
T ss_pred CEEEEEEeCChhHhhhh--hHHHHHHhcCCCEEEEEeecccccccc---cccCCceEEEEec-----ccCccceEEEEEc
Confidence 89999999999988754 499999999999999999999877652 3467999887543 5789999999999
Q ss_pred ccCCCCCcccccceeeeecccccccccCcccccCccccccccccccCCCCCEEEEeeCeEEEEEEEecCCCCCChhhHHH
Q 011576 81 VKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGRCVITDHGHFILFNVYGPRADSEDTVRIQF 160 (482)
Q Consensus 81 ~~~~f~~~~~~~pi~v~~g~~g~~~~~~p~~~~gl~~~~~~~~~~~D~eGR~i~v~~~~~~l~nvY~P~~~~~~~~r~~~ 160 (482)
.+ |+.+..++.. ...|.|||+|.++++.|+|+|+|+|+++. ..+++++
T Consensus 71 ~~----------~~~v~~~~~~---------------------~~~d~eGR~I~~~~~~~~l~nvY~Pn~~~-~~~r~~~ 118 (250)
T PRK13911 71 KE----------PLSVSYGINI---------------------EEHDKEGRVITCEFESFYLVNVYTPNSQQ-ALSRLSY 118 (250)
T ss_pred CC----------chheEEcCCC---------------------CcccccCCEEEEEECCEEEEEEEecCCCC-CCcchHH
Confidence 83 5555555420 13578999999999999999999999885 4569999
Q ss_pred HHHHHHHHHHHHHHHHhCCCeEEEecCCCCCCCcccccCC-----CCCCCchHHHHHHHHHHHHcCCCccccccccCCCC
Q 011576 161 KLQFFHVLQKRWEFLLCQGRRIFVVGDLNIAPAAIDRCDA-----GPDFAKNEFRIWFRSMLVESGGSFFDVFRSKHPER 235 (482)
Q Consensus 161 k~~fl~~L~~~i~~l~~~~~pvII~GDFN~~~~~~D~~~~-----~~~~~~~~~r~~l~~ll~~~g~~L~Dv~R~~~P~~ 235 (482)
|++|++.|.+++..+ ..++++|||||||+++.++|.+++ .++|.++| |.||+.++. .| |+|+||.+||+.
T Consensus 119 K~~~~~~~~~~l~~l-~~~~~~Ii~GD~Nva~~~~D~~~~~~~~~~~gf~~~e-r~~f~~~l~-~g--l~D~~R~~~p~~ 193 (250)
T PRK13911 119 RMSWEVEFKKFLKAL-ELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEE-RGKFSELLN-AG--FIDTFRYFYPNK 193 (250)
T ss_pred HHHHHHHHHHHHHhc-ccCCCEEEEccccCCCChhhccChhhcCCCCCcCHHH-HHHHHHHHh-cC--CeehhhhhCCCC
Confidence 999999999999876 566899999999999999998753 35777777 999999996 34 999999999997
Q ss_pred CCccccCCCCCCCcccCCcceEEEEEEcCCCccccccccccccccceeeeeeeeeccccCCCCCCCCccCCCCcCCCCCC
Q 011576 236 REAYTCWPSNTGAEQFNYGTRIDHILCAGPCLHQKHDLQSHNFVTCHVNECDILIDYKRWKPGNAPRWKGGMSTRLEGSD 315 (482)
Q Consensus 236 ~~~yT~~s~~~~~~~~n~gsRID~Ilvs~~~l~~~~~l~~~~~~~~~V~~~~I~~~~~~~~~~~~~~w~~~~~~~~~~SD 315 (482)
.+.||||+++.+++..|.|.||||||+++.+.. .+.++.|... ..+||
T Consensus 194 ~~~yTww~~~~~~~~~n~g~RIDyilvs~~~~~-------------~~~~~~i~~~-------------------~~~SD 241 (250)
T PRK13911 194 EKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKT-------------RLKDALIYKD-------------------ILGSD 241 (250)
T ss_pred CCCCccCCCcCCccccCCcceEEEEEEChHHhh-------------hEEEEEECCC-------------------CCCCC
Confidence 667999999999999999999999999999854 7888888653 36799
Q ss_pred CcceEEEE
Q 011576 316 HAPVYMCL 323 (482)
Q Consensus 316 H~PV~~~l 323 (482)
|+||+++|
T Consensus 242 H~Pv~~~~ 249 (250)
T PRK13911 242 HCPVGLEL 249 (250)
T ss_pred cccEEEEe
Confidence 99999987
No 3
>PRK11756 exonuclease III; Provisional
Probab=100.00 E-value=7.1e-43 Score=346.26 Aligned_cols=252 Identities=30% Similarity=0.510 Sum_probs=195.4
Q ss_pred CEEEEeeccCccccccccchHHHHHhhcCCcEEEEecccccccchhhHHHhhcCCcEEEeecccCCCCCCcceEEEEEEe
Q 011576 1 MKIVTYNVNGLRQRVSQFGSLRKLLDSFDADIICFQETKLRRQELKSDLVMADGYESFFSCTRTSDKGRTGYSGVATFCR 80 (482)
Q Consensus 1 mrIlTwNVnGl~~~~~r~~~l~~~L~~~~pDII~LQEtk~~~~~l~~~l~~~~gY~~~~s~~~~~~~g~~g~~GVAIlsR 80 (482)
|||+||||+|++.+.++ +.++|++.+|||||||||+.....+....+...||..++. +.++++|||||+|
T Consensus 1 mri~T~Nv~g~~~~~~~---i~~~i~~~~pDIi~LQE~~~~~~~~~~~~~~~~gy~~~~~-------~~~~~~GvailSr 70 (268)
T PRK11756 1 MKFVSFNINGLRARPHQ---LEAIIEKHQPDVIGLQETKVHDEMFPLEEVEALGYHVFYH-------GQKGHYGVALLSK 70 (268)
T ss_pred CEEEEEEcCCHHHHHHH---HHHHHHhcCCCEEEEEecccccccCCHHHHHhcCCEEEEe-------CCCCCCEEEEEEC
Confidence 89999999999876554 9999999999999999999876554434456789987764 2356789999999
Q ss_pred ccCCCCCcccccceeeeecccccccccCcccccCccccccccccccCCCCCEEEEee----CeEEEEEEEecCCCCC-Ch
Q 011576 81 VKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGRCVITDH----GHFILFNVYGPRADSE-DT 155 (482)
Q Consensus 81 ~~~~f~~~~~~~pi~v~~g~~g~~~~~~p~~~~gl~~~~~~~~~~~D~eGR~i~v~~----~~~~l~nvY~P~~~~~-~~ 155 (482)
.+ +..+..++.+ ...+.++|++.+.+ +.+.++|+|+|++... ..
T Consensus 71 ~p----------~~~~~~~~~~---------------------~~~~~~~r~l~~~i~~~~g~~~v~n~y~P~~~~~~~~ 119 (268)
T PRK11756 71 QT----------PIAVRKGFPT---------------------DDEEAQRRIIMATIPTPNGNLTVINGYFPQGESRDHP 119 (268)
T ss_pred CC----------hHHeEECCCC---------------------ccccccCCEEEEEEEcCCCCEEEEEEEecCCCCCCcc
Confidence 84 2233322210 01345789988765 3599999999997643 23
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCeEEEecCCCCCCCcccccCC-----------CCCCCchHHHHHHHHHHHHcCCCc
Q 011576 156 VRIQFKLQFFHVLQKRWEFLLCQGRRIFVVGDLNIAPAAIDRCDA-----------GPDFAKNEFRIWFRSMLVESGGSF 224 (482)
Q Consensus 156 ~r~~~k~~fl~~L~~~i~~l~~~~~pvII~GDFN~~~~~~D~~~~-----------~~~~~~~~~r~~l~~ll~~~g~~L 224 (482)
++...|.+|+..|..++.++...+.|+|||||||+.+.++|...+ ..+|.+.| |.|++.++. .| |
T Consensus 120 ~~~~~r~~~~~~l~~~l~~~~~~~~pvIl~GDfN~~~~~~D~~~~~~~~~~~~~~~~~~~~~~e-r~~~~~l~~-~~--l 195 (268)
T PRK11756 120 TKFPAKRQFYQDLQNYLETELSPDNPLLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEE-REWLDRLMD-WG--L 195 (268)
T ss_pred hhHHHHHHHHHHHHHHHHHHhccCCCEEEEeecccCCChhhcCCcccChHHhcccCCccCCHHH-HHHHHHHHh-CC--c
Confidence 456678899999999998876778899999999999998887531 24566666 889988763 44 9
Q ss_pred cccccccCCCCCCccccCCCCCCCcccCCcceEEEEEEcCCCccccccccccccccceeeeeeeeeccccCCCCCCCCcc
Q 011576 225 FDVFRSKHPERREAYTCWPSNTGAEQFNYGTRIDHILCAGPCLHQKHDLQSHNFVTCHVNECDILIDYKRWKPGNAPRWK 304 (482)
Q Consensus 225 ~Dv~R~~~P~~~~~yT~~s~~~~~~~~n~gsRID~Ilvs~~~l~~~~~l~~~~~~~~~V~~~~I~~~~~~~~~~~~~~w~ 304 (482)
+|+||.+||+..+.||||+++.++++.|.|.||||||+++.+.. +|++|.|..+.+.+
T Consensus 196 ~D~~R~~~p~~~~~~T~~~~~~~~~~~~~g~RIDyi~~s~~~~~-------------~v~~~~i~~~~~~~--------- 253 (268)
T PRK11756 196 VDTFRQLNPDVNDRFSWFDYRSKGFDDNRGLRIDLILATQPLAE-------------RCVETGIDYDIRGM--------- 253 (268)
T ss_pred EeehhhhCCCCCCcccCcCCcccccccCCceEEEEEEeCHHHHh-------------hheEeEEeHHHhCC---------
Confidence 99999999985456999999988888899999999999998743 79999998764322
Q ss_pred CCCCcCCCCCCCcceEEEEec
Q 011576 305 GGMSTRLEGSDHAPVYMCLGE 325 (482)
Q Consensus 305 ~~~~~~~~~SDH~PV~~~l~~ 325 (482)
..+|||+||+++|.+
T Consensus 254 ------~~~SDH~PV~~~~~~ 268 (268)
T PRK11756 254 ------EKPSDHAPIWATFKL 268 (268)
T ss_pred ------CCCCCcccEEEEEeC
Confidence 268999999999863
No 4
>TIGR00195 exoDNase_III exodeoxyribonuclease III. The model brings in reverse transcriptases at scores below 50, model also contains eukaryotic apurinic/apyrimidinic endonucleases which group in the same family
Probab=100.00 E-value=8.2e-41 Score=328.88 Aligned_cols=249 Identities=35% Similarity=0.632 Sum_probs=197.9
Q ss_pred CEEEEeeccCccccccccchHHHHHhhcCCcEEEEecccccccchhhHHHhhcCCcEEEeecccCCCCCCcceEEEEEEe
Q 011576 1 MKIVTYNVNGLRQRVSQFGSLRKLLDSFDADIICFQETKLRRQELKSDLVMADGYESFFSCTRTSDKGRTGYSGVATFCR 80 (482)
Q Consensus 1 mrIlTwNVnGl~~~~~r~~~l~~~L~~~~pDII~LQEtk~~~~~l~~~l~~~~gY~~~~s~~~~~~~g~~g~~GVAIlsR 80 (482)
|||+||||+|++.+.++ +.++|+.++|||||||||+.....+...++...||..++.. .+|+.||||++|
T Consensus 1 mri~t~Ni~g~~~~~~~---~~~~l~~~~~DIi~LQE~~~~~~~~~~~~~~~~g~~~~~~~-------~~g~~Gvailsr 70 (254)
T TIGR00195 1 MKIISWNVNGLRARLHK---GLAWLKENQPDVLCLQETKVQDEQFPLEPFHKEGYHVFFSG-------QKGYSGVAIFSK 70 (254)
T ss_pred CEEEEEEcCcHHHhHHH---HHHHHHhcCCCEEEEEecccchhhCCHHHhhcCCcEEEEec-------CCCcceEEEEEc
Confidence 89999999999876655 89999999999999999998655454445566899877653 246679999999
Q ss_pred ccCCCCCcccccceeeeecccccccccCcccccCccccccccccccCCCCCEEEEeeCeEEEEEEEecCCCCCChhhHHH
Q 011576 81 VKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGRCVITDHGHFILFNVYGPRADSEDTVRIQF 160 (482)
Q Consensus 81 ~~~~f~~~~~~~pi~v~~g~~g~~~~~~p~~~~gl~~~~~~~~~~~D~eGR~i~v~~~~~~l~nvY~P~~~~~~~~r~~~ 160 (482)
.. |+.+..++.. ...|.+||++.+++..+.|+|+|+|+++..+.++..+
T Consensus 71 ~~----------~~~~~~~~~~---------------------~~~~~~~r~i~~~~~~~~l~~~~~p~~~~~~~~~~~~ 119 (254)
T TIGR00195 71 EE----------PLSVRRGFGV---------------------EEEDAEGRIIMAEFDSFLVINGYFPNGSRDDSEKLPY 119 (254)
T ss_pred CC----------cceEEECCCC---------------------cccccCCCEEEEEECCEEEEEEEccCCCCCCCccHHH
Confidence 63 5544433310 1246799999999988999999999976555677888
Q ss_pred HHHHHHHHHHHHHHHHhCCCeEEEecCCCCCCCcccccCC-----CCCCCchHHHHHHHHHHHHcCCCccccccccCCCC
Q 011576 161 KLQFFHVLQKRWEFLLCQGRRIFVVGDLNIAPAAIDRCDA-----GPDFAKNEFRIWFRSMLVESGGSFFDVFRSKHPER 235 (482)
Q Consensus 161 k~~fl~~L~~~i~~l~~~~~pvII~GDFN~~~~~~D~~~~-----~~~~~~~~~r~~l~~ll~~~g~~L~Dv~R~~~P~~ 235 (482)
|.+|++.|.+.+..+...+.|+|||||||+.+.++|+.+. .++|.+.+ +.+|+.++. .+ |+|+||..+|..
T Consensus 120 r~~~~~~l~~~~~~~~~~~~pvIi~GDfN~~~~~~d~~~~~~~~~~~~~~~~e-~~~~~~l~~-~~--l~D~~r~~~~~~ 195 (254)
T TIGR00195 120 KLQWLEALQNYLEKLVDKDKPVLICGDMNIAPTEIDLHSPDENRNHTGFLPEE-REWLDRLLE-AG--LVDTFRKFNPDE 195 (254)
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEeecccCCChhhccChhhcCCCcCcChHH-HHHHHHHHH-cC--CEeeecccCCCC
Confidence 9999999999999876777899999999999988877543 24566655 788988884 44 999999999984
Q ss_pred CCccccCCCCCCCcccCCcceEEEEEEcCCCccccccccccccccceeeeeeeeeccccCCCCCCCCccCCCCcCCCCCC
Q 011576 236 REAYTCWPSNTGAEQFNYGTRIDHILCAGPCLHQKHDLQSHNFVTCHVNECDILIDYKRWKPGNAPRWKGGMSTRLEGSD 315 (482)
Q Consensus 236 ~~~yT~~s~~~~~~~~n~gsRID~Ilvs~~~l~~~~~l~~~~~~~~~V~~~~I~~~~~~~~~~~~~~w~~~~~~~~~~SD 315 (482)
+.||||+.++.++..+.+.||||||+++.+.. +|.+|.|....... ..+||
T Consensus 196 -~~~T~~~~~~~~~~~~~g~RID~i~~s~~~~~-------------~v~~~~i~~~~~~~---------------~~~SD 246 (254)
T TIGR00195 196 -GAYSWWDYRTKARDRNRGWRIDYFLVSEPLKE-------------RCVDCGIDYDIRGS---------------EKPSD 246 (254)
T ss_pred -CCCcccCCcCCccccCCceEEEEEEECHHHHh-------------hhhEEEEcHHHhcC---------------CCCCC
Confidence 46999998887776788999999999998754 78999997642211 26799
Q ss_pred CcceEEEE
Q 011576 316 HAPVYMCL 323 (482)
Q Consensus 316 H~PV~~~l 323 (482)
|+||.++|
T Consensus 247 H~Pv~~~~ 254 (254)
T TIGR00195 247 HCPVVLEF 254 (254)
T ss_pred cccEEEeC
Confidence 99999975
No 5
>TIGR00633 xth exodeoxyribonuclease III (xth). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=5.8e-38 Score=307.43 Aligned_cols=248 Identities=37% Similarity=0.666 Sum_probs=190.0
Q ss_pred CEEEEeeccCccccccccchH-HHHHhhcCCcEEEEecccccccchhhHHHhhcCCcEEEeecccCCCCCCcceEEEEEE
Q 011576 1 MKIVTYNVNGLRQRVSQFGSL-RKLLDSFDADIICFQETKLRRQELKSDLVMADGYESFFSCTRTSDKGRTGYSGVATFC 79 (482)
Q Consensus 1 mrIlTwNVnGl~~~~~r~~~l-~~~L~~~~pDII~LQEtk~~~~~l~~~l~~~~gY~~~~s~~~~~~~g~~g~~GVAIls 79 (482)
|||+||||+|++.+.++ + .++|++++|||||||||+.....+...++...||..++... ...|++|||||+
T Consensus 1 lri~t~Nv~g~~~~~~~---~~~~~l~~~~~DIv~LQE~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~~G~ails 72 (255)
T TIGR00633 1 MKIISWNVNGLRARLHK---LFLDWLKEEQPDVLCLQETKVADEQFPAELFEELGYHVFFHGA-----KSKGYSGVAILS 72 (255)
T ss_pred CEEEEEecccHHHHhhc---cHHHHHHhcCCCEEEEEeccCchhhCCHhHhccCCceEEEeec-----ccCCcceEEEEE
Confidence 89999999999887765 5 99999999999999999986544333344568998877643 123567999999
Q ss_pred eccCCCCCcccccceeeeecccccccccCcccccCccccccccccccCCCCCEEEEeeCeEEEEEEEecCCCCCChhhHH
Q 011576 80 RVKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGRCVITDHGHFILFNVYGPRADSEDTVRIQ 159 (482)
Q Consensus 80 R~~~~f~~~~~~~pi~v~~g~~g~~~~~~p~~~~gl~~~~~~~~~~~D~eGR~i~v~~~~~~l~nvY~P~~~~~~~~r~~ 159 (482)
|.+ +..+..++.. ...+.+||++.+.++.+.|+++|+|+.+..+.++.+
T Consensus 73 r~~----------~~~~~~~~~~---------------------~~~~~~~r~l~~~~~~~~i~~vy~p~~~~~~~~~~~ 121 (255)
T TIGR00633 73 KVE----------PLDVRYGFGG---------------------EEHDEEGRVITAEFDGFTVVNVYVPNGGSRGLERLE 121 (255)
T ss_pred cCC----------cceEEECCCC---------------------CcccCCCcEEEEEECCEEEEEEEccCCCCCCchhHH
Confidence 984 2223322210 125678999999889999999999998755566777
Q ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEecCCCCCCCcccccCC-----CCCCCchHHHHHHHHHHHHcCCCccccccccCCC
Q 011576 160 FKLQFFHVLQKRWEFLLCQGRRIFVVGDLNIAPAAIDRCDA-----GPDFAKNEFRIWFRSMLVESGGSFFDVFRSKHPE 234 (482)
Q Consensus 160 ~k~~fl~~L~~~i~~l~~~~~pvII~GDFN~~~~~~D~~~~-----~~~~~~~~~r~~l~~ll~~~g~~L~Dv~R~~~P~ 234 (482)
.|.++++.|.+.+.+.+..+.|+||+||||+.+..+|+... ..++...+ +.+|+.++. .| |.|+||..+|.
T Consensus 122 ~r~~~~~~l~~~~~~~~~~~~~~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~--l~D~~~~~~~~ 197 (255)
T TIGR00633 122 YKLQFWDALFQYYEKELDAGKPVIICGDMNVAHTEIDLGNPKENKGNAGFTPEE-REWFDELLE-AG--LVDTFRHFNPD 197 (255)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEeecccCCChHHccChhhcCCCCCcCHHH-HHHHHHHHH-cC--CEecchhhCCC
Confidence 88889988888776655677899999999999988776532 12344333 677888885 55 99999999998
Q ss_pred CCCccccCCCCCCCcccCCcceEEEEEEcCCCccccccccccccccceeeeeeeeeccccCCCCCCCCccCCCCcCCCCC
Q 011576 235 RREAYTCWPSNTGAEQFNYGTRIDHILCAGPCLHQKHDLQSHNFVTCHVNECDILIDYKRWKPGNAPRWKGGMSTRLEGS 314 (482)
Q Consensus 235 ~~~~yT~~s~~~~~~~~n~gsRID~Ilvs~~~l~~~~~l~~~~~~~~~V~~~~I~~~~~~~~~~~~~~w~~~~~~~~~~S 314 (482)
..+.||||+.+...++.+.+.||||||++..+.. .+.++.|... ..+|
T Consensus 198 ~~~~~T~~~~~~~~~~~~~~~rID~i~~s~~~~~-------------~~~~~~i~~~-------------------~~~S 245 (255)
T TIGR00633 198 TEGAYTWWDYRSGARDRNRGWRIDYFLVSEPLAE-------------RVVDSYIDSE-------------------IRGS 245 (255)
T ss_pred CCCcCcCcCCccCccccCCceEEEEEEECHHHHh-------------hhcEeEECCC-------------------CCCC
Confidence 7557999998876666678999999999998743 6788888643 2469
Q ss_pred CCcceEEEE
Q 011576 315 DHAPVYMCL 323 (482)
Q Consensus 315 DH~PV~~~l 323 (482)
||+||+++|
T Consensus 246 DH~pv~~~~ 254 (255)
T TIGR00633 246 DHCPIVLEL 254 (255)
T ss_pred CcccEEEEE
Confidence 999999987
No 6
>PRK05421 hypothetical protein; Provisional
Probab=99.87 E-value=8.4e-21 Score=188.00 Aligned_cols=213 Identities=15% Similarity=0.175 Sum_probs=123.3
Q ss_pred CEEEEeeccCccccccccchHHHHHhhcCCcEEEEecccccccchhhHHHhhcCCcEEEeecccCCCCCCcceEEEEEEe
Q 011576 1 MKIVTYNVNGLRQRVSQFGSLRKLLDSFDADIICFQETKLRRQELKSDLVMADGYESFFSCTRTSDKGRTGYSGVATFCR 80 (482)
Q Consensus 1 mrIlTwNVnGl~~~~~r~~~l~~~L~~~~pDII~LQEtk~~~~~l~~~l~~~~gY~~~~s~~~~~~~g~~g~~GVAIlsR 80 (482)
|||+||||++.+....+ ...+.+ ..+|||||||||+.... . ..++...+|...+..+. ....+++||||++|
T Consensus 44 lri~t~NI~~~~~~~~~--~~l~~l-~~~~DiI~LQEv~~~~~-~-~~~~~~~~~~~~~~~~~---~~~~~~~GvaiLSR 115 (263)
T PRK05421 44 LRLLVWNIYKQQRAGWL--SVLKNL-GKDADLVLLQEAQTTPE-L-VQFATANYLAADQAPAF---VLPQHPSGVMTLSK 115 (263)
T ss_pred eeEEEEEccccccccHH--HHHHHh-ccCCCEEEEEecccCcc-h-HHHhhcccchHHhcccc---ccCCCccceeEeee
Confidence 69999999988765221 245555 89999999999986432 1 12334455544333221 12345789999999
Q ss_pred ccCCCCCcccccceeeeecccccccccCcccccCccccccccccccCCCCCEE-EE--ee---CeEEEEEEEecCCCCCC
Q 011576 81 VKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGRCV-IT--DH---GHFILFNVYGPRADSED 154 (482)
Q Consensus 81 ~~~~f~~~~~~~pi~v~~g~~g~~~~~~p~~~~gl~~~~~~~~~~~D~eGR~i-~v--~~---~~~~l~nvY~P~~~~~~ 154 (482)
.++ .....+.+ ..| .-..+|.+ .+ +. +.+.|+|+|+++.....
T Consensus 116 ~pi-----------~~~~~~~~----~~~----------------~~~~~r~~l~a~~~~~~g~~l~v~ntHl~~~~~~~ 164 (263)
T PRK05421 116 AHP-----------VYCCPLRE----REP----------------WLRLPKSALITEYPLPNGRTLLVVNIHAINFSLGV 164 (263)
T ss_pred ccc-----------ceeeccCC----CCc----------------cccCcceeEEEEEEeCCCCEEEEEEECccccCcCh
Confidence 852 11111100 000 01123332 22 22 25999999997643211
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCCeEEEecCCCCCCCcccccCCCCCCCchHHHHHHHHHHHHcCCCccccccccCCC
Q 011576 155 TVRIQFKLQFFHVLQKRWEFLLCQGRRIFVVGDLNIAPAAIDRCDAGPDFAKNEFRIWFRSMLVESGGSFFDVFRSKHPE 234 (482)
Q Consensus 155 ~~r~~~k~~fl~~L~~~i~~l~~~~~pvII~GDFN~~~~~~D~~~~~~~~~~~~~r~~l~~ll~~~g~~L~Dv~R~~~P~ 234 (482)
..+...++.|.+.+.. ...|+||+||||..... . ...++.++...+ +.|++ .|.
T Consensus 165 ----~~r~~q~~~l~~~~~~---~~~p~Il~GDFN~~~~~-----------~---~~~l~~~~~~~~--l~~~~---~~~ 218 (263)
T PRK05421 165 ----DVYSKQLEPIGDQIAH---HSGPVILAGDFNTWSRK-----------R---MNALKRFARELG--LKEVR---FTD 218 (263)
T ss_pred ----HHHHHHHHHHHHHHHh---CCCCEEEEcccccCccc-----------c---hHHHHHHHHHcC--CCccC---cCC
Confidence 2234455555555543 35799999999964321 0 234666665554 55542 111
Q ss_pred CCCccccCCCCCCCcccCCcceEEEEEEcCCCccccccccccccccceeeeeeeeeccccCCCCCCCCccCCCCcCCCCC
Q 011576 235 RREAYTCWPSNTGAEQFNYGTRIDHILCAGPCLHQKHDLQSHNFVTCHVNECDILIDYKRWKPGNAPRWKGGMSTRLEGS 314 (482)
Q Consensus 235 ~~~~yT~~s~~~~~~~~n~gsRID~Ilvs~~~l~~~~~l~~~~~~~~~V~~~~I~~~~~~~~~~~~~~w~~~~~~~~~~S 314 (482)
... + ..++.||||||++ .+ .+.++.+... .+|
T Consensus 219 ~~~-~-----------~~~~~~ID~I~~~-~~---------------~v~~~~v~~~--------------------~~S 250 (263)
T PRK05421 219 DQR-R-----------RAFGRPLDFVFYR-GL---------------NVSKASVLVT--------------------RAS 250 (263)
T ss_pred ccc-c-----------cccCCCcceEEEC-Cc---------------EEEEEEcCCC--------------------CCC
Confidence 000 0 0125789999985 43 6778877642 689
Q ss_pred CCcceEEEEecC
Q 011576 315 DHAPVYMCLGEV 326 (482)
Q Consensus 315 DH~PV~~~l~~~ 326 (482)
||+||+++|.+.
T Consensus 251 DH~Pv~a~l~l~ 262 (263)
T PRK05421 251 DHNPLLVEFSLK 262 (263)
T ss_pred CccCEEEEEEec
Confidence 999999999864
No 7
>KOG1294 consensus Apurinic/apyrimidinic endonuclease and related enzymes [Replication, recombination and repair]
Probab=99.84 E-value=1.2e-20 Score=190.18 Aligned_cols=253 Identities=25% Similarity=0.420 Sum_probs=190.0
Q ss_pred EEEEeeccCccccccccchHHHHHhhcCCcEEEEecccccccchhhHHHhhcCC-cEEEeecccCCCCCCcceEEEEEEe
Q 011576 2 KIVTYNVNGLRQRVSQFGSLRKLLDSFDADIICFQETKLRRQELKSDLVMADGY-ESFFSCTRTSDKGRTGYSGVATFCR 80 (482)
Q Consensus 2 rIlTwNVnGl~~~~~r~~~l~~~L~~~~pDII~LQEtk~~~~~l~~~l~~~~gY-~~~~s~~~~~~~g~~g~~GVAIlsR 80 (482)
.|+.|||.+++...+. .-..++.....|++|+|||++.-...+...-...+| +.++.++ .++.+|.|++.+++
T Consensus 65 ~i~~~~i~~~~~~~~~--~~~~~~~~~l~d~~~~~~t~~~i~~~~~~~~~~~~~~~~~~~~~----~~~~~y~~~~~~~~ 138 (335)
T KOG1294|consen 65 NICPWDIAGLEACEKF--SGDPEISSELRDLQCLLETKCTIDSGPCSHPTEKGYTHSLLSCA----SKKDGYSGEIDYSK 138 (335)
T ss_pred ecCchhhhhhhhhhcc--ccchhccccchhhhhhhhccceeccCcceecccCCcccceeecc----cccCCccceeeeee
Confidence 5788999998876665 256677888899999999998633333223346788 5677655 35668889999998
Q ss_pred ccCCCCCcccccceeeeecccccccccCcccccCccccccccccccCCCCCEEEEeeCeEEEEEEEecCCCCCChhhHHH
Q 011576 81 VKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGRCVITDHGHFILFNVYGPRADSEDTVRIQF 160 (482)
Q Consensus 81 ~~~~f~~~~~~~pi~v~~g~~g~~~~~~p~~~~gl~~~~~~~~~~~D~eGR~i~v~~~~~~l~nvY~P~~~~~~~~r~~~ 160 (482)
. .|+.+..++..+. ...+..||+|++++..+.+++.|+|+.... ....++
T Consensus 139 ~----------~p~~v~~~~~~~~-------------------s~h~~~g~~i~~e~e~~~l~~~y~p~~~~~-~~~~~~ 188 (335)
T KOG1294|consen 139 F----------KPLKVHYGFGAMG-------------------SDHRPVGRVIIAEFEIFILINTYVPNIGGG-LVNLVY 188 (335)
T ss_pred c----------ccceeeecccccC-------------------CccCccceEEEEeecceeeccccCcccccc-cchhhh
Confidence 7 3777766553110 236789999999999999999999998763 333444
Q ss_pred H--HHHHHHHHHHHHHHHhC---CCeEEEecCCCCCCCccccc----C------CCCCCCchHHHHHH-HHHHHHcCCCc
Q 011576 161 K--LQFFHVLQKRWEFLLCQ---GRRIFVVGDLNIAPAAIDRC----D------AGPDFAKNEFRIWF-RSMLVESGGSF 224 (482)
Q Consensus 161 k--~~fl~~L~~~i~~l~~~---~~pvII~GDFN~~~~~~D~~----~------~~~~~~~~~~r~~l-~~ll~~~g~~L 224 (482)
+ .+|-..+...+.+.-.. ..+++++||.|..+..+|.. . ..++|++++ |.++ ..++. . +.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~k~~~~~~v~~gd~nvs~~~i~~~~~~~~~~~~~~~~~~~t~e~-R~~~~~~~~~-~-~~~ 265 (335)
T KOG1294|consen 189 RILDRWDKEIEEKRKKQSSSKNLKAPVVICGDLNVSHEEIDPSKPLVSPAGNTLSNAGFTPEE-RDSFFAELLE-K-GPL 265 (335)
T ss_pred hhhhhhHHHHHHHhhhccccccccCcceeccccccchhhccccccccccccCCcCCCCCCHHH-hhhHHHhhcc-C-Ccc
Confidence 4 55555555555543222 24899999999999888841 1 135677776 8888 56653 3 259
Q ss_pred cccccccCCCCCCccccCCCCCCCcccCCcceEEEEEEcCCCccccccccccccccceeeeeeeeeccccCCCCCCCCcc
Q 011576 225 FDVFRSKHPERREAYTCWPSNTGAEQFNYGTRIDHILCAGPCLHQKHDLQSHNFVTCHVNECDILIDYKRWKPGNAPRWK 304 (482)
Q Consensus 225 ~Dv~R~~~P~~~~~yT~~s~~~~~~~~n~gsRID~Ilvs~~~l~~~~~l~~~~~~~~~V~~~~I~~~~~~~~~~~~~~w~ 304 (482)
+|+||..+++....||+|.+....+.++.+.|+||++++....+ .+.++.|....
T Consensus 266 iDt~r~~~~~~~~~~t~Wk~~~~~r~~~~~~r~dy~~Vsk~~~n-------------~~r~~~Ic~r~------------ 320 (335)
T KOG1294|consen 266 IDTYRELHKDQKKAYTFWKYMPNGRQRGHGERCDYILVSKPGPN-------------NGRRFYICSRP------------ 320 (335)
T ss_pred eeehhhhcCCccccccchhhccccccCCCCCceeEEEecCcCCC-------------CCceeeeecCc------------
Confidence 99999999998867999999999999999999999999999866 78899998641
Q ss_pred CCCCcCCCCCCCcceEEEEe
Q 011576 305 GGMSTRLEGSDHAPVYMCLG 324 (482)
Q Consensus 305 ~~~~~~~~~SDH~PV~~~l~ 324 (482)
+.+|||+|+.+.|.
T Consensus 321 ------~~gsdh~pi~~~~~ 334 (335)
T KOG1294|consen 321 ------IHGSDHCPITLEFF 334 (335)
T ss_pred ------cCCCCCCCeeeeec
Confidence 48999999999885
No 8
>COG3568 ElsH Metal-dependent hydrolase [General function prediction only]
Probab=99.76 E-value=2e-17 Score=160.51 Aligned_cols=233 Identities=20% Similarity=0.168 Sum_probs=130.2
Q ss_pred CEEEEeeccCcccc-cccc--chHHHHHhhcCCcEEEEeccccc----ccchh---hHHHhhcCCcEEEeecccCCCCCC
Q 011576 1 MKIVTYNVNGLRQR-VSQF--GSLRKLLDSFDADIICFQETKLR----RQELK---SDLVMADGYESFFSCTRTSDKGRT 70 (482)
Q Consensus 1 mrIlTwNVnGl~~~-~~r~--~~l~~~L~~~~pDII~LQEtk~~----~~~l~---~~l~~~~gY~~~~s~~~~~~~g~~ 70 (482)
|+|+||||+-.... ..|. ..+.+.+.+..+|||||||+... ++.+. ..+....+.+.+++..........
T Consensus 10 ~~v~TyNih~~~~~~d~r~~~~r~~~~i~~~~~Div~LQEv~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 89 (259)
T COG3568 10 FKVLTYNIHKGFGAFDRRFDLPRIAEVIREVGADIVALQEVDGAFGRHRDGLLDLPHLLGRLGLAPYWWSGAAFGAVYGE 89 (259)
T ss_pred eEEEEEEEEEccCccCceecHHHHHHHHHhhccCeeeeecccccccccccccchhHHHHHHhcCCccccchhhhhhhccc
Confidence 58999999744333 1111 34899999999999999999742 12211 112233343433332210001234
Q ss_pred cceEEEEEEeccCCCCCcccccceeeeecccccccccCcccccCccccccccccccCCCCCEEE-E--e---eCeEEEEE
Q 011576 71 GYSGVATFCRVKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGRCVI-T--D---HGHFILFN 144 (482)
Q Consensus 71 g~~GVAIlsR~~~~f~~~~~~~pi~v~~g~~g~~~~~~p~~~~gl~~~~~~~~~~~D~eGR~i~-v--~---~~~~~l~n 144 (482)
+..|++++++.+ +....... + |. ..+.+.|-.. + + ++.+.|+|
T Consensus 90 ~~~GnaiLS~~p-----------i~~v~~~~-l-----p~--------------~~~~~~Rgal~a~~~~~~g~~l~V~~ 138 (259)
T COG3568 90 GQHGNAILSRLP-----------IRDVENLA-L-----PD--------------PTGLEPRGALLAEIELPGGKPLRVIN 138 (259)
T ss_pred ceeeeEEEecCc-----------ccchhhcc-C-----CC--------------CCCCCCceeEEEEEEcCCCCEEEEEE
Confidence 567999999764 22111110 0 00 0122444432 2 2 24799999
Q ss_pred EEecCCCCCChhhHHHHHHHHHHHHHHHHHHHhCCCeEEEecCCCCCCCcccccCCCCCCCchHHHHHHHHHHHHcCCCc
Q 011576 145 VYGPRADSEDTVRIQFKLQFFHVLQKRWEFLLCQGRRIFVVGDLNIAPAAIDRCDAGPDFAKNEFRIWFRSMLVESGGSF 224 (482)
Q Consensus 145 vY~P~~~~~~~~r~~~k~~fl~~L~~~i~~l~~~~~pvII~GDFN~~~~~~D~~~~~~~~~~~~~r~~l~~ll~~~g~~L 224 (482)
+|+--.. +.|.+++..|.+.+ . +....|+|+|||||+.++.-++.... +..+. .+..+
T Consensus 139 ~HL~l~~-------~~R~~Q~~~L~~~~-~-l~~~~p~vl~GDFN~~p~s~~yr~~~------------~~~~~-~~~~~ 196 (259)
T COG3568 139 AHLGLSE-------ESRLRQAAALLALA-G-LPALNPTVLMGDFNNEPGSAEYRLAA------------RSPLN-AQAAL 196 (259)
T ss_pred EeccccH-------HHHHHHHHHHHhhc-c-CcccCceEEEccCCCCCCCccceecc------------CCchh-hcccc
Confidence 9998332 23445555555411 1 23445999999999988764442111 01111 11125
Q ss_pred cccccccCCCCCCccccCCCCCCCcccCCcceEEEEEEcCCCccccccccccccccceeeeeeeeeccccCCCCCCCCcc
Q 011576 225 FDVFRSKHPERREAYTCWPSNTGAEQFNYGTRIDHILCAGPCLHQKHDLQSHNFVTCHVNECDILIDYKRWKPGNAPRWK 304 (482)
Q Consensus 225 ~Dv~R~~~P~~~~~yT~~s~~~~~~~~n~gsRID~Ilvs~~~l~~~~~l~~~~~~~~~V~~~~I~~~~~~~~~~~~~~w~ 304 (482)
.+++.-.++... -||-+.. ...||||||+++.+ .|..+++..+.. |
T Consensus 197 ~~~~~~a~~~~~--~tfps~~-------p~lriD~Ifvs~~~---------------~i~~~~v~~~~~---------a- 242 (259)
T COG3568 197 TGAFAPAVGRTI--RTFPSNT-------PLLRLDRIFVSKEL---------------AIRSVHVLTDRL---------A- 242 (259)
T ss_pred ccccCcccCccc--CCCCCCC-------ccccccEEEecCcc---------------cEEEEEeecCCC---------c-
Confidence 666655554321 2443332 24599999999987 678888887521 1
Q ss_pred CCCCcCCCCCCCcceEEEEecC
Q 011576 305 GGMSTRLEGSDHAPVYMCLGEV 326 (482)
Q Consensus 305 ~~~~~~~~~SDH~PV~~~l~~~ 326 (482)
-..|||+||.++|.+.
T Consensus 243 ------~~aSDHlPl~aeL~~~ 258 (259)
T COG3568 243 ------RVASDHLPLLAELRLK 258 (259)
T ss_pred ------cccccccceEEEEecC
Confidence 3689999999999864
No 9
>KOG3873 consensus Sphingomyelinase family protein [Signal transduction mechanisms]
Probab=99.74 E-value=1.6e-17 Score=164.48 Aligned_cols=276 Identities=18% Similarity=0.210 Sum_probs=152.7
Q ss_pred CEEEEeeccCccc----cccccchHHHHHhhcCCcEEEEecccccccchhhHHHhhcCCcEEEeecccCCCCCCcceEEE
Q 011576 1 MKIVTYNVNGLRQ----RVSQFGSLRKLLDSFDADIICFQETKLRRQELKSDLVMADGYESFFSCTRTSDKGRTGYSGVA 76 (482)
Q Consensus 1 mrIlTwNVnGl~~----~~~r~~~l~~~L~~~~pDII~LQEtk~~~~~l~~~l~~~~gY~~~~s~~~~~~~g~~g~~GVA 76 (482)
+||+|.|++|+.- +..|.+.+-+++.+...||+.|||+|..++-..-.-.+..-|.+...+. .|--| +|++
T Consensus 9 lriltlN~Wgip~~Sk~R~~Rm~~~g~~l~~E~yDiv~LQEvWs~eD~~~L~~~~ss~yPysh~FH----SGimG-aGL~ 83 (422)
T KOG3873|consen 9 LRILTLNIWGIPYVSKDRRHRMDAIGDELASEKYDIVSLQEVWSQEDFEYLQSGCSSVYPYSHYFH----SGIMG-AGLC 83 (422)
T ss_pred eeeeEeeccccccccchhHHHHHHHhHHHhhcccchhhHHHHHHHHHHHHHHHhccccCchHHhhh----ccccc-CceE
Confidence 6899999999852 2334456889999999999999999975432210112333454322211 14444 6999
Q ss_pred EEEeccCCCCCcccccceeeeecccccccccCcccccCccccccccccccCCCCCEEE-EeeCe--EEEEEE--EecCCC
Q 011576 77 TFCRVKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGRCVI-TDHGH--FILFNV--YGPRAD 151 (482)
Q Consensus 77 IlsR~~~~f~~~~~~~pi~v~~g~~g~~~~~~p~~~~gl~~~~~~~~~~~D~eGR~i~-v~~~~--~~l~nv--Y~P~~~ 151 (482)
+|+|.++.-. ......+.|++. - +.. +| .+-..|.-+. +.++. +.+.|. |+|.+.
T Consensus 84 vfSK~PI~~t-------~~~~y~lNG~p~---~-i~r--GD-------Wf~GK~Vgl~~l~~~g~~v~~yntHLHAeY~r 143 (422)
T KOG3873|consen 84 VFSKHPILET-------LFHRYSLNGYPH---A-IHR--GD-------WFGGKGVGLTVLLVGGRMVNLYNTHLHAEYDR 143 (422)
T ss_pred EeecCchhhh-------hhhccccCCccc---e-eee--cc-------ccccceeEEEEEeeCCEEeeeeehhccccccc
Confidence 9999854110 001112222110 0 000 00 0111121121 12232 333443 345554
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHhCCCeEEEecCCCCCCCcccccCCCCCCCchHHHHHHHHHHHHcCCCcccccccc
Q 011576 152 SEDTVRIQFKLQFFHVLQKRWEFLLCQGRRIFVVGDLNIAPAAIDRCDAGPDFAKNEFRIWFRSMLVESGGSFFDVFRSK 231 (482)
Q Consensus 152 ~~~~~r~~~k~~fl~~L~~~i~~l~~~~~pvII~GDFN~~~~~~D~~~~~~~~~~~~~r~~l~~ll~~~g~~L~Dv~R~~ 231 (482)
.. ++-...|..+.-.+.++++.....+.-||++||||+.|.++.++ +|.+.| |+|+|+.+
T Consensus 144 q~-D~YL~HR~~QAwdlaqfi~~t~q~~~vVI~~GDLN~~P~dl~~~-----------------ll~~a~--l~daw~~~ 203 (422)
T KOG3873|consen 144 QN-DEYLCHRVAQAWDLAQFIRATRQNADVVILAGDLNMQPQDLGHK-----------------LLLSAG--LVDAWTSL 203 (422)
T ss_pred cC-chhhhHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCcccccee-----------------eeeccc--hhhhHhhh
Confidence 43 33455667777778888888878889999999999988765431 222344 77888877
Q ss_pred CCCCCC--------------ccccCCCCCCC------cccCCcceEEEEEEcCCCccccccccccccccceeeeeeeeec
Q 011576 232 HPERRE--------------AYTCWPSNTGA------EQFNYGTRIDHILCAGPCLHQKHDLQSHNFVTCHVNECDILID 291 (482)
Q Consensus 232 ~P~~~~--------------~yT~~s~~~~~------~~~n~gsRID~Ilvs~~~l~~~~~l~~~~~~~~~V~~~~I~~~ 291 (482)
|++.-. .-||-+..+-. .+.-.+.||||+|+++...+ .+..++++...
T Consensus 204 h~~q~e~~~~r~s~~~~l~~g~tcd~~~N~y~~aqk~~ddp~~~RiDYvl~k~~~~~------------~~~a~~~~t~~ 271 (422)
T KOG3873|consen 204 HLDQCESDSFRLSEDKELVEGNTCDSPLNCYTSAQKREDDPLGKRIDYVLVKPGDCN------------AKIAEVEFTEP 271 (422)
T ss_pred chhhhcCcccccchhhhhhcCCcccCcchhhhHHHhCCCCccceeeeEEEEcCcceE------------EEeeeEEecCC
Confidence 765311 12443322111 11224889999999987532 13344444321
Q ss_pred cccCCCCCCCCccCCCCcCCCCCCCcceEEEEecCCCCCCCCChhhHhhcccccc
Q 011576 292 YKRWKPGNAPRWKGGMSTRLEGSDHAPVYMCLGEVPEIPQHSTPSLASRYLPIIR 346 (482)
Q Consensus 292 ~~~~~~~~~~~w~~~~~~~~~~SDH~PV~~~l~~~~~~~~~~~~~l~~~~~~~~r 346 (482)
+ .| ..+...|||..++++|.+.+..+...|-+-|+..+...+
T Consensus 272 -r--vP----------~~d~s~SDH~Al~a~L~I~~~~~~~~p~t~v~~~~~~~~ 313 (422)
T KOG3873|consen 272 -R--VP----------GEDCSYSDHEALMATLKIFKQPPRSEPVTTVEVNRLVLD 313 (422)
T ss_pred -C--CC----------CCCCCccchhhheeEEEeecCCCCCCCccccccccchhH
Confidence 1 11 123588999999999998775554444444444444333
No 10
>TIGR03395 sphingomy sphingomyelin phosphodiesterase. Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins.
Probab=99.72 E-value=5.3e-16 Score=155.20 Aligned_cols=214 Identities=13% Similarity=0.090 Sum_probs=109.4
Q ss_pred CEEEEeeccCccc-------cccccchHHHHHhhcCCcEEEEeccccccc--chhhHHHhhcCCcEEE--eeccc-C---
Q 011576 1 MKIVTYNVNGLRQ-------RVSQFGSLRKLLDSFDADIICFQETKLRRQ--ELKSDLVMADGYESFF--SCTRT-S--- 65 (482)
Q Consensus 1 mrIlTwNVnGl~~-------~~~r~~~l~~~L~~~~pDII~LQEtk~~~~--~l~~~l~~~~gY~~~~--s~~~~-~--- 65 (482)
||||||||+.+.. ...|...+.+.+...+||||||||+..... .+.+.+ ...|.... ..... .
T Consensus 1 lkVmtyNv~~l~~~~~~~~g~~~R~~~i~~~~~~~~~DVV~LQEv~~~~~~~~l~~~L--~~~yp~~~~~~g~~~~g~~~ 78 (283)
T TIGR03395 1 IKILSHNVYMLSTNLYPNWGQMERADLIASADYIKNQDVVILNEAFDTSASKRLLDNL--REEYPYQTDVIGRSKKGWDK 78 (283)
T ss_pred CeEEEEEeeeecccccCCccHhHHHHHHHHhhcccCCCEEEEecccchHHHHHHHHHH--HhhCCceEeecccccccchh
Confidence 7999999975321 223444577778888999999999964321 122112 22343211 10000 0
Q ss_pred -----CCCCCcceEEEEEEeccCCCCCcccccceeeeecccccccccCcccccCccccccccccccCCCCCEEEEe--e-
Q 011576 66 -----DKGRTGYSGVATFCRVKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGRCVITD--H- 137 (482)
Q Consensus 66 -----~~g~~g~~GVAIlsR~~~~f~~~~~~~pi~v~~g~~g~~~~~~p~~~~gl~~~~~~~~~~~D~eGR~i~v~--~- 137 (482)
.....+..|++||+|.++ ...... .+.. . .+.+ .....| ++.++ .
T Consensus 79 ~~g~~~~~~~~~~G~~iLSr~Pi-----------~~~~~~-~f~~----~--~~~d--------~~~~kg-~l~a~i~~~ 131 (283)
T TIGR03395 79 TLGNYSSSALEDGGVAIVSKWPI-----------EEKIQY-IFNK----G--CGAD--------NLSNKG-FAYVKINKN 131 (283)
T ss_pred ccccccccCccCCEEEEEECCCc-----------cccEEE-EccC----C--CCCc--------cccCCc-eEEEEEecC
Confidence 000112359999999853 211100 0000 0 0000 000112 22232 2
Q ss_pred -CeEEEEEEEecCCCCCC--hhhHHHHHHHHHHHHHHHHHH-HhCCCeEEEecCCCCCCCcccccCCCCCCCchHHHHHH
Q 011576 138 -GHFILFNVYGPRADSED--TVRIQFKLQFFHVLQKRWEFL-LCQGRRIFVVGDLNIAPAAIDRCDAGPDFAKNEFRIWF 213 (482)
Q Consensus 138 -~~~~l~nvY~P~~~~~~--~~r~~~k~~fl~~L~~~i~~l-~~~~~pvII~GDFN~~~~~~D~~~~~~~~~~~~~r~~l 213 (482)
..+.|+|+|+-+..... ......|..+++.|.+++... ...+.|+||+||||+.+.. ..+
T Consensus 132 g~~~~v~~THL~~~~~~~~~~~~~~~R~~Q~~~i~~~i~~~~~~~~~pvIl~GDfN~~~~s----------------~~~ 195 (283)
T TIGR03395 132 GKKFHVIGTHLQAQDSMCSKLGPASIRANQLNEIQDFIDSKNIPKDETVLIGGDLNVNKGS----------------NEY 195 (283)
T ss_pred CeEEEEEEeCCCCCcccccccccHHHHHHHHHHHHHHHhhccCCCCceEEEEeeCCCCCCC----------------HHH
Confidence 35899999997643210 011345677778888877542 2346789999999986542 124
Q ss_pred HHHHHHcCCCccccccccCCCCCCccccCCCCCCC----cccCCcceEEEEEEcCCC
Q 011576 214 RSMLVESGGSFFDVFRSKHPERREAYTCWPSNTGA----EQFNYGTRIDHILCAGPC 266 (482)
Q Consensus 214 ~~ll~~~g~~L~Dv~R~~~P~~~~~yT~~s~~~~~----~~~n~gsRID~Ilvs~~~ 266 (482)
+.++...+ ..+.. +.. ..|||-...+.- .+.....||||||++...
T Consensus 196 ~~ml~~l~--~~~p~---~~g--~~~T~d~~~N~~a~~~~~~~~~~~lDyvl~~~~~ 245 (283)
T TIGR03395 196 HDMFKTLN--VSEPR---YVG--VPATWDATTNSIAKYYYPKEEPEYLDYIFVSKSH 245 (283)
T ss_pred HHHHHHhc--ccCCC---cCC--CCCCcCCCcCchhhhhcCCCCcceEEEEEEECCC
Confidence 44554433 33321 111 137885533211 012235699999999764
No 11
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling []. Proteins this domain is found in include: AP endonuclease proteins (4.2.99.18 from EC), DNase I proteins (3.1.21.1 from EC), Synaptojanin an inositol-1,4,5-trisphosphate phosphatase (3.1.3.56 from EC) and Sphingomyelinase (3.1.4.12 from EC).; PDB: 2J63_A 2JC4_A 3TEB_B 3MTC_A 3N9V_B 1ZWX_A 2F1N_A 1Y21_A 1NTF_A 2IMQ_X ....
Probab=99.71 E-value=9.6e-17 Score=152.88 Aligned_cols=76 Identities=28% Similarity=0.340 Sum_probs=42.7
Q ss_pred EEeeccCccccc---cccchHHHHHhhcCCcEEEEeccccc--ccchhhHHHhhcCCcEEEeecccCCCCC--CcceEEE
Q 011576 4 VTYNVNGLRQRV---SQFGSLRKLLDSFDADIICFQETKLR--RQELKSDLVMADGYESFFSCTRTSDKGR--TGYSGVA 76 (482)
Q Consensus 4 lTwNVnGl~~~~---~r~~~l~~~L~~~~pDII~LQEtk~~--~~~l~~~l~~~~gY~~~~s~~~~~~~g~--~g~~GVA 76 (482)
+||||+++..+. .+...|.++|..++||||||||++.. ...+...+....++........ .+. .+..|++
T Consensus 1 ~T~Nv~~~~~~~~~~~~~~~i~~~i~~~~~Dii~LQEv~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~ 77 (249)
T PF03372_consen 1 MTWNVRGWNYRSDNDRKRREIAQWIAELDPDIIALQEVRNDDLSELLEEQLRGYLGYYGSFWPGN---SPPSDAGGYGVA 77 (249)
T ss_dssp EEEEESTHHHHHHHHHHHHHHHHHHHHHT-SEEEEEEEESHHHHHHHHHHHHTCTTHEEEEEETS---SSTTCSSSEEEE
T ss_pred CeEEeCcCcccccchhHHHHHHHHHHhcCCCEEEEecchhhhhhhhhhhhcccccccccceeccc---cccccccCceEE
Confidence 799999943221 12234999999999999999999843 1122211212222222322221 011 0246999
Q ss_pred EEEecc
Q 011576 77 TFCRVK 82 (482)
Q Consensus 77 IlsR~~ 82 (482)
|++|.+
T Consensus 78 i~~r~~ 83 (249)
T PF03372_consen 78 ILSRSP 83 (249)
T ss_dssp EEESSC
T ss_pred EEEccc
Confidence 999985
No 12
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional
Probab=99.69 E-value=9.8e-16 Score=165.46 Aligned_cols=181 Identities=20% Similarity=0.242 Sum_probs=95.8
Q ss_pred CEEEEeeccCc---------------cccccccchHHHHHhhcCCcEEEEeccccccc-chhhHHHhhcCCcEEEeeccc
Q 011576 1 MKIVTYNVNGL---------------RQRVSQFGSLRKLLDSFDADIICFQETKLRRQ-ELKSDLVMADGYESFFSCTRT 64 (482)
Q Consensus 1 mrIlTwNVnGl---------------~~~~~r~~~l~~~L~~~~pDII~LQEtk~~~~-~l~~~l~~~~gY~~~~s~~~~ 64 (482)
+|||||||..- ..+..|+..|.+.|..++||||||||+....- ++....+...||..++.....
T Consensus 255 frVmSYNILAd~ya~~dly~ycp~~aL~W~yRk~lIl~EI~~~~aDIICLQEV~~~~~~d~~~p~L~~~GY~Gv~~~Kt~ 334 (606)
T PLN03144 255 FTVLSYNILSDLYATSDMYSYCPPWALSWTYRRQNLLREIVGYRADILCLQEVQSDHFEEFFAPELDKHGYQALYKKKTT 334 (606)
T ss_pred EEEEEeeeccccccCcccccCCCccccCHHHHHHHHHHHHHhcCCCEEEEeecCHHHHHHHHHhhhhhcCceEEEeCCCC
Confidence 58999999631 12334556799999999999999999953211 121223456789887753210
Q ss_pred C--CCCCCcceEEEEEEeccCCCCCcccccceeeeecccccccccCcccccC--cc-ccccccccccCCCCCEEEEee--
Q 011576 65 S--DKGRTGYSGVATFCRVKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEG--LE-DFSKDELLKIDSEGRCVITDH-- 137 (482)
Q Consensus 65 ~--~~g~~g~~GVAIlsR~~~~f~~~~~~~pi~v~~g~~g~~~~~~p~~~~g--l~-~~~~~~~~~~D~eGR~i~v~~-- 137 (482)
. ..+..+..|+|||+|.+ +|++.+. -.++.+..++... |..... .+ .+. + ...|.-+.++.++.
T Consensus 335 ~~~~~~~~~~DGcAIFyr~d-rFeLv~~---~~ief~~~~lslt--~~~~~s~~~~~~l~--R-l~kdNVAliv~Le~k~ 405 (606)
T PLN03144 335 EVYTGNTYVIDGCATFFRRD-RFSLVKK---YEVEFNKAAQSLT--EALIPSAQKKAALN--R-LLKDNVALIVVLEAKF 405 (606)
T ss_pred ccccccccCCceeEEEEECc-ceEEEEe---eeeeccchhhccC--ccccccccchhhhh--h-hccCcEEEEEEEEEec
Confidence 0 01112346999999985 5654421 0111111111100 000000 00 000 0 00122222333332
Q ss_pred -----------CeEEEEEEEecCCCCCChhhHHHHHHHHHHHHHHHHHHHh-CCCeEEEecCCCCCCCc
Q 011576 138 -----------GHFILFNVYGPRADSEDTVRIQFKLQFFHVLQKRWEFLLC-QGRRIFVVGDLNIAPAA 194 (482)
Q Consensus 138 -----------~~~~l~nvY~P~~~~~~~~r~~~k~~fl~~L~~~i~~l~~-~~~pvII~GDFN~~~~~ 194 (482)
..|.|+|+|+-..... ...|..+...|.+.++.+.. .+.|+|||||||..|+.
T Consensus 406 ~~~~~~~~~~~~~l~VaNTHL~~~p~~----~dvRl~Q~~~Ll~~l~~~~~~~~~PvIlcGDFNS~P~S 470 (606)
T PLN03144 406 GNQGADNGGKRQLLCVANTHIHANQEL----KDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGS 470 (606)
T ss_pred ccccccCCCCccEEEEEEeeeccCCcc----chhHHHHHHHHHHHHHHHhhcCCCceEEeccCCCCCCC
Confidence 1389999999443321 23445555666666665432 46899999999998764
No 13
>PTZ00297 pantothenate kinase; Provisional
Probab=99.68 E-value=2.2e-15 Score=177.22 Aligned_cols=263 Identities=18% Similarity=0.179 Sum_probs=132.7
Q ss_pred CEEEEeeccCccc---cccccchHHHHHhhc-CCcEEEEeccccccc-------chh-----hHHHhhcCCcEEEeeccc
Q 011576 1 MKIVTYNVNGLRQ---RVSQFGSLRKLLDSF-DADIICFQETKLRRQ-------ELK-----SDLVMADGYESFFSCTRT 64 (482)
Q Consensus 1 mrIlTwNVnGl~~---~~~r~~~l~~~L~~~-~pDII~LQEtk~~~~-------~l~-----~~l~~~~gY~~~~s~~~~ 64 (482)
+||+||||+.+.. ...+ ..+..+|+.+ ++|||||||+-.... +.. .+.+...||..+......
T Consensus 11 l~VlTyNv~~~~~~~~~~~~-~ri~~~i~~l~~~DIv~lQEvf~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 89 (1452)
T PTZ00297 11 ARVLSYNFNILPRGCGGFQH-ERIETFLASVDAYDVVLLQEVYAASVLPYFLQKQLCFQKMLVDELKARGFHHYVISKQP 89 (1452)
T ss_pred eEEEEEEccccCCCcccccH-HHHHHHHHhccCCCEEEEecccccccccccccccchhhHHHHHHHHhcCCceeEeecCc
Confidence 6899999985432 1222 3488999995 779999999974321 100 123345688765532211
Q ss_pred CCCC-----CCcceEEEEEEeccCCCCCcccccceeeeecccccccccCcccccCccccccccccccCCCCC-EEEEee-
Q 011576 65 SDKG-----RTGYSGVATFCRVKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGR-CVITDH- 137 (482)
Q Consensus 65 ~~~g-----~~g~~GVAIlsR~~~~f~~~~~~~pi~v~~g~~g~~~~~~p~~~~gl~~~~~~~~~~~D~eGR-~i~v~~- 137 (482)
.... --+..|+||++|++ +...+.+. + |.. ...++ .-.-|- ...++.
T Consensus 90 ~~~~~~~~~~~~~~G~AILSR~P-----------I~~~~~~~-l-----~~~--~~~~~-------~~~RG~L~a~I~vp 143 (1452)
T PTZ00297 90 SYLTMLRYNVCSDNGLIIASRFP-----------IWQRGSYT-F-----RNH--ERGEQ-------SVRRGCLFAEVEVP 143 (1452)
T ss_pred cccccccCccccCCEEEEEECCC-----------hhhceeee-c-----Ccc--ccccc-------ccccceEEEEEEcc
Confidence 0000 00335999999995 32222110 0 000 00000 001121 122332
Q ss_pred ------CeEEEEEEEecCCCCCChhhHHHHHHHHHHHHHHHHHHH---------hCCCeEEEecCCCCCCCcccccCCCC
Q 011576 138 ------GHFILFNVYGPRADSEDTVRIQFKLQFFHVLQKRWEFLL---------CQGRRIFVVGDLNIAPAAIDRCDAGP 202 (482)
Q Consensus 138 ------~~~~l~nvY~P~~~~~~~~r~~~k~~fl~~L~~~i~~l~---------~~~~pvII~GDFN~~~~~~D~~~~~~ 202 (482)
+.+.++|+|+-..... .. +.++.+.+.++++..+ ..+.|+||+||||+.. +|+....+
T Consensus 144 ~~~g~~~~v~v~~tHL~~~~~~-~~----R~~Q~~ql~~~i~~~i~~~~~~~~~~~~~PvILaGDFN~~~--~~~~~~~~ 216 (1452)
T PTZ00297 144 LAEGGSQRIVFFNVHLRQEDSL-PS----TSSQVQETRRFVESVIANVYEQNNDGAEIPFVIAGDFNING--IDPHNGGH 216 (1452)
T ss_pred ccCCCCceEEEEEeCCCCCCCc-ch----HHHHHHHHHHHHHHhhhhhcccccCCCCCCEEEEeeCCCcc--ccccccCC
Confidence 3699999999765431 12 2344444555544311 2456999999999642 12211000
Q ss_pred CCCchHHHHHHHHHHHHcCCCccccccccC---CCCCCccccCCCCC-CCcccCCcceEEEEEEcCCCcccccccccccc
Q 011576 203 DFAKNEFRIWFRSMLVESGGSFFDVFRSKH---PERREAYTCWPSNT-GAEQFNYGTRIDHILCAGPCLHQKHDLQSHNF 278 (482)
Q Consensus 203 ~~~~~~~r~~l~~ll~~~g~~L~Dv~R~~~---P~~~~~yT~~s~~~-~~~~~n~gsRID~Ilvs~~~l~~~~~l~~~~~ 278 (482)
...++...+.. +...+.++.|++...+ |......+||.... ..+......||||||+++.+
T Consensus 217 --~s~e~~~ml~~-l~~~~~~l~dv~~~~~~~~~~T~p~~~~fP~~~p~~~~~~~~~riD~Ifv~~~v------------ 281 (1452)
T PTZ00297 217 --PTKRFQELLNE-LQDLGSGVREVIYDETGQHPPTRPPILFFPEQSKLERYSSTPQRQDYFFVTPCV------------ 281 (1452)
T ss_pred --ccHHHHHHHHH-hhhccccHhHHhHhhcCCCCCCCCccccccccCccccccCCCcceeEEEEeCCc------------
Confidence 11222222222 2333334667654433 22222245555331 11111223699999999875
Q ss_pred ccceeeeeeeeeccccCCCCCCCCccCCCCcCCCCCCCcceEEEEecC
Q 011576 279 VTCHVNECDILIDYKRWKPGNAPRWKGGMSTRLEGSDHAPVYMCLGEV 326 (482)
Q Consensus 279 ~~~~V~~~~I~~~~~~~~~~~~~~w~~~~~~~~~~SDH~PV~~~l~~~ 326 (482)
.|.++.|.....-. ... ....|||+||.++|.+.
T Consensus 282 ---~v~~~~v~~~~~~~----~~~-------~~~~SDH~Pv~a~l~l~ 315 (1452)
T PTZ00297 282 ---QVEKPRIEKFVVSS----RRP-------YTYLSDHFGVSARLTLP 315 (1452)
T ss_pred ---eEEEEEEecccccC----CCC-------CCCcCcCccEEEEEEeC
Confidence 67788775431100 001 13799999999999873
No 14
>KOG2756 consensus Predicted Mg2+-dependent phosphodiesterase TTRAP [Signal transduction mechanisms]
Probab=99.58 E-value=1.6e-14 Score=138.04 Aligned_cols=198 Identities=17% Similarity=0.218 Sum_probs=121.8
Q ss_pred EEEEeeccCcc--ccccccchHHHHHhhcCCcEEEEecccccccchhhHHHhhcC-CcEEEeecccCCCCCCcceEEEEE
Q 011576 2 KIVTYNVNGLR--QRVSQFGSLRKLLDSFDADIICFQETKLRRQELKSDLVMADG-YESFFSCTRTSDKGRTGYSGVATF 78 (482)
Q Consensus 2 rIlTwNVnGl~--~~~~r~~~l~~~L~~~~pDII~LQEtk~~~~~l~~~l~~~~g-Y~~~~s~~~~~~~g~~g~~GVAIl 78 (482)
.+++||+.||. +-..|.+++..+|+.+.||||||||+.-..... +-+... |..++. ...+++|.+++
T Consensus 101 S~~~WnidgLdln~l~~RMrAv~H~i~l~sPdiiflQEV~p~~y~~---~~K~~s~y~i~~~-------~~~~~~~~~~l 170 (349)
T KOG2756|consen 101 SLITWNIDGLDLNNLSERMRAVCHYLALYSPDVIFLQEVIPPYYSY---LKKRSSNYEIITG-------HEEGYFTAIML 170 (349)
T ss_pred EEEEeeccccccchHHHHHHHHHHHHHhcCCCEEEEeecCchhhHH---HHHhhhheeEEEe-------ccceeeeeeee
Confidence 57899999864 345566789999999999999999996322111 112233 334433 23467788888
Q ss_pred EeccCCCCCcccccceeeeecccccccccCcccccCccccccccccccCCCCCEEEE-e--e--CeEEEEEEEecCCCCC
Q 011576 79 CRVKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGRCVIT-D--H--GHFILFNVYGPRADSE 153 (482)
Q Consensus 79 sR~~~~f~~~~~~~pi~v~~g~~g~~~~~~p~~~~gl~~~~~~~~~~~D~eGR~i~v-~--~--~~~~l~nvY~P~~~~~ 153 (482)
.+..+.-++.+ .+ |+. -...+|-+.+ + . ..+++++.|+-.....
T Consensus 171 ~~s~~~Vks~~---------~i--------~F~--------------NS~M~R~L~I~Ev~v~G~Kl~l~tsHLEStr~h 219 (349)
T KOG2756|consen 171 KKSRVKVKSQE---------II--------PFP--------------NSKMMRNLLIVEVNVSGNKLCLMTSHLESTRGH 219 (349)
T ss_pred ehhhcCccccc---------ee--------ccC--------------cchhhheeEEEEEeecCceEEEEeccccCCCCC
Confidence 76643211111 00 110 1224555532 2 2 3589999999776655
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhCCCeEEEecCCCCCCCcccccCCCCCCCchHHHHHHHHHHHHcCCCccccccccC-
Q 011576 154 DTVRIQFKLQFFHVLQKRWEFLLCQGRRIFVVGDLNIAPAAIDRCDAGPDFAKNEFRIWFRSMLVESGGSFFDVFRSKH- 232 (482)
Q Consensus 154 ~~~r~~~k~~fl~~L~~~i~~l~~~~~pvII~GDFN~~~~~~D~~~~~~~~~~~~~r~~l~~ll~~~g~~L~Dv~R~~~- 232 (482)
.++|.++-..-++..++.|+.+ .+..||.+||+|..-....++.- + . +++|+|..+.
T Consensus 220 ~P~r~~qF~~~~~k~~EaIe~l--PnA~ViFGGD~NlrD~ev~r~~l-----P-------------D--~~vDvWE~lg~ 277 (349)
T KOG2756|consen 220 APERMNQFKMVLKKMQEAIESL--PNATVIFGGDTNLRDREVTRCGL-----P-------------D--NIVDVWEFLGK 277 (349)
T ss_pred ChHHHHHHHHHHHHHHHHHHhC--CCceEEEcCcccchhhhcccCCC-----C-------------c--hHHHHHHHhCC
Confidence 5555444334456666777665 77899999999965332222211 1 1 3899999888
Q ss_pred CCCCCccccCCCCCCCcccC--CcceEEEEEEc
Q 011576 233 PERREAYTCWPSNTGAEQFN--YGTRIDHILCA 263 (482)
Q Consensus 233 P~~~~~yT~~s~~~~~~~~n--~gsRID~Ilvs 263 (482)
|..- .|||-...+.....+ ...|+|+||..
T Consensus 278 p~~~-~FTwDT~~N~nl~G~~a~k~RfDRi~~r 309 (349)
T KOG2756|consen 278 PKHC-QFTWDTQMNSNLGGTAACKLRFDRIFFR 309 (349)
T ss_pred CCcC-ceeeecccCcccchhHHHHHHHHHHhhh
Confidence 6644 599988766544333 33599999994
No 15
>PRK15251 cytolethal distending toxin subunit CdtB; Provisional
Probab=99.55 E-value=1.9e-13 Score=133.98 Aligned_cols=150 Identities=14% Similarity=0.177 Sum_probs=88.3
Q ss_pred CEEEEeeccCcccccc-ccc-hHHHHHhhc-CCcEEEEecccccccc-------h-------h-hHH-H-----hhcCCc
Q 011576 1 MKIVTYNVNGLRQRVS-QFG-SLRKLLDSF-DADIICFQETKLRRQE-------L-------K-SDL-V-----MADGYE 56 (482)
Q Consensus 1 mrIlTwNVnGl~~~~~-r~~-~l~~~L~~~-~pDII~LQEtk~~~~~-------l-------~-~~l-~-----~~~gY~ 56 (482)
.|++|||.+|-..... +.. .+.++|... .+||++|||+-.-+.. . + .+. + ...++.
T Consensus 25 ~~~~twn~qg~s~~~~~kw~~~v~~l~~~~~~~DIla~QEags~p~~a~~~~~~~~~~g~~~~v~ey~w~l~~~srpgm~ 104 (271)
T PRK15251 25 YKVATWNLQGSSASTESKWNVNVRQLLSGENPADILMVQEAGSLPSSAVPTGRHVQPGGVGIPIDEYTWNLGTRSRPNQV 104 (271)
T ss_pred ceEEEeecCCCCCCChhhhhhhHHHHhcCCCCCCEEEEEecCCCccccccccccccccccccCcccEEEEccCccCCCce
Confidence 4899999999754332 222 477888775 6999999998542211 0 1 000 0 134555
Q ss_pred EEEeecccCCCCCCcceEEEEEEeccCCCCCcccccceeeeecccccccccCcccccCccccccccccccCCCCCEEEEe
Q 011576 57 SFFSCTRTSDKGRTGYSGVATFCRVKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGRCVITD 136 (482)
Q Consensus 57 ~~~s~~~~~~~g~~g~~GVAIlsR~~~~f~~~~~~~pi~v~~g~~g~~~~~~p~~~~gl~~~~~~~~~~~D~eGR~i~v~ 136 (482)
++|..... .+ .|..|+||++|.+. .. ..-+. .| .......+.++
T Consensus 105 YiY~~aiD--~~-ggr~glAIlSr~~a----------~~-~~~l~------~p----------------~~~~Rpilgi~ 148 (271)
T PRK15251 105 YIYYSRVD--VG-ANRVNLAIVSRRRA----------DE-VIVLR------PP----------------TVASRPIIGIR 148 (271)
T ss_pred EEEEeccc--CC-CCceeEEEEecccc----------cc-eEEec------CC----------------CCcccceEEEE
Confidence 55554321 23 34469999999852 11 11110 00 11233445677
Q ss_pred eCeEEEEEEEecCCCCCChhhHHHHHHHHHHHHHHHH-HHHhCCCeEEEecCCCCCCCc
Q 011576 137 HGHFILFNVYGPRADSEDTVRIQFKLQFFHVLQKRWE-FLLCQGRRIFVVGDLNIAPAA 194 (482)
Q Consensus 137 ~~~~~l~nvY~P~~~~~~~~r~~~k~~fl~~L~~~i~-~l~~~~~pvII~GDFN~~~~~ 194 (482)
++.+.++++|+++.+.. + +...++.+.++.. . ....|+||+||||..|+.
T Consensus 149 i~~~~ffstH~~a~~~~--d----a~aiV~~I~~~f~~~--~~~~pw~I~GDFNr~P~s 199 (271)
T PRK15251 149 IGNDVFFSIHALANGGT--D----AGAIVRAVHNFFRPN--MRHINWMIAGDFNRSPDR 199 (271)
T ss_pred ecCeEEEEeeecCCCCc--c----HHHHHHHHHHHHhhc--cCCCCEEEeccCCCCCcc
Confidence 77899999999988532 2 3445566666554 2 123699999999987764
No 16
>KOG2338 consensus Transcriptional effector CCR4-related protein [Transcription]
Probab=99.46 E-value=1.8e-12 Score=134.28 Aligned_cols=163 Identities=21% Similarity=0.299 Sum_probs=96.9
Q ss_pred CEEEEeeccC--c---------------cccccccchHHHHHhhcCCcEEEEecccccccc-hhhHHHhhcCCcEEEeec
Q 011576 1 MKIVTYNVNG--L---------------RQRVSQFGSLRKLLDSFDADIICFQETKLRRQE-LKSDLVMADGYESFFSCT 62 (482)
Q Consensus 1 mrIlTwNVnG--l---------------~~~~~r~~~l~~~L~~~~pDII~LQEtk~~~~~-l~~~l~~~~gY~~~~s~~ 62 (482)
++||||||-. + -.+..|.+.|+..|...+|||+||||+...... +........||+.++...
T Consensus 117 ftvmSYNILAQ~l~~~~~r~~~~~s~~~L~W~~R~~~Ll~EL~~~dpDIlCLQEVq~d~~~~~~~~~~~~lGy~~~~~r~ 196 (495)
T KOG2338|consen 117 FTVMSYNILAQDLLRDIRRLYFPESGPALKWLRRSQNLLNELKHYDPDVLCLQEVQEDHYPEFWQPLLGKLGYTGFFKRR 196 (495)
T ss_pred eEEEEehHhHHHHHHHhHHhhccCChhhcchhHHhHHHHHHHhhcCCCeeeehhhhhhhhHHHHHHHHhhcCceEEEEec
Confidence 4799999932 2 012234467999999999999999999753221 222345678999877643
Q ss_pred ccCCCCCCcceEEEEEEeccCCCCCcccccceeeeecccccccccCcccccCccccccccccccCCCCCEEEEee-----
Q 011576 63 RTSDKGRTGYSGVATFCRVKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGRCVITDH----- 137 (482)
Q Consensus 63 ~~~~~g~~g~~GVAIlsR~~~~f~~~~~~~pi~v~~g~~g~~~~~~p~~~~gl~~~~~~~~~~~D~eGR~i~v~~----- 137 (482)
.+.+ ..||||+++.. .|++... .++..-... ..+...|.-|-+|.+.+
T Consensus 197 ----t~~K-thG~ai~w~~~-~F~lv~~-~~l~y~~~~--------------------~~l~n~~NV~lvv~l~f~~~~~ 249 (495)
T KOG2338|consen 197 ----TGTK-THGVAILWHSA-KFKLVNH-SELNYFDSG--------------------SALANRDNVGLVVSLEFRLVDE 249 (495)
T ss_pred ----cCCC-CceEEEEEecc-cceeccc-chhhccccc--------------------chhhcccceeEEEEEEecccCc
Confidence 2223 35999999974 5554311 111100000 01223444555555554
Q ss_pred --CeEEEEEEEecCCCCCChhhHHHHHHHHHHHHHHHHHHHhC---CCeEEEecCCCCCCCc
Q 011576 138 --GHFILFNVYGPRADSEDTVRIQFKLQFFHVLQKRWEFLLCQ---GRRIFVVGDLNIAPAA 194 (482)
Q Consensus 138 --~~~~l~nvY~P~~~~~~~~r~~~k~~fl~~L~~~i~~l~~~---~~pvII~GDFN~~~~~ 194 (482)
..+.|+|+|+-.......+|..+ ...|.+.+++.... +-|+++|||||..+++
T Consensus 250 ~sq~ilVanTHLl~np~~~~vrL~Q----~~iiL~~~~~~~~~~~~~~pi~l~GDfNt~p~~ 307 (495)
T KOG2338|consen 250 SSQGILVANTHLLFNPSRSDVRLAQ----VYIILAELEKMSKSSKSHWPIFLCGDFNTEPDS 307 (495)
T ss_pred ccCceEEEeeeeeecCcccchhhHH----HHHHHHHHHHHHhhcccCCCeEEecCCCCCCCC
Confidence 26899999986655444445443 44444444444333 4599999999998753
No 17
>COG3021 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.41 E-value=1.5e-12 Score=128.83 Aligned_cols=215 Identities=18% Similarity=0.157 Sum_probs=121.3
Q ss_pred EEEEeeccCccccccccchHHHHHhhcCCcEEEEecccccccchhhHHHhhcCCcEEEeecccCCCCCCcceEEEEEEec
Q 011576 2 KIVTYNVNGLRQRVSQFGSLRKLLDSFDADIICFQETKLRRQELKSDLVMADGYESFFSCTRTSDKGRTGYSGVATFCRV 81 (482)
Q Consensus 2 rIlTwNVnGl~~~~~r~~~l~~~L~~~~pDII~LQEtk~~~~~l~~~l~~~~gY~~~~s~~~~~~~g~~g~~GVAIlsR~ 81 (482)
++++.|++.-+....+ +...+...++|+|.+||+........ ......|..+..+. ...+..|+++++|.
T Consensus 90 ~~l~~N~r~~n~~~~k---~Lsl~~~~~~D~v~~~E~~~~~~~~~--~~l~~~yP~~~~~~-----~~~~~~~~a~~sr~ 159 (309)
T COG3021 90 WNLQKNVRFDNASVAK---LLSLIQQLDADAVTTPEGVQLWTAKV--GALAAQYPAFILCQ-----HPTGVFTLAILSRR 159 (309)
T ss_pred hhhhhhccccCcCHHH---HHHHHhhhCcchhhhHHHHHHhHhHH--HHHHHhCCceeecC-----CCCCeeeeeecccc
Confidence 5678888777665554 78888888899999999964322221 14456777666544 22355689999887
Q ss_pred cCCCCCcccccceeeeecccccccccCcccccCccccccccccccCCCCCEEEEe----eCeEEEEEEEecCCCCCChhh
Q 011576 82 KSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGRCVITD----HGHFILFNVYGPRADSEDTVR 157 (482)
Q Consensus 82 ~~~f~~~~~~~pi~v~~g~~g~~~~~~p~~~~gl~~~~~~~~~~~D~eGR~i~v~----~~~~~l~nvY~P~~~~~~~~r 157 (482)
+ ++...+..+++ ....++.++.. ...+.++++|.-+.....
T Consensus 160 ~----------~~~~~~~e~~~----------------------~~pk~~~~t~~~~~~g~~l~v~~lh~~~~~~~~--- 204 (309)
T COG3021 160 P----------CCPLTEAEPWL----------------------RLPKSALATAYPLPDGTELTVVALHAVNFPVGT--- 204 (309)
T ss_pred c----------cccccccCccc----------------------cCCccceeEEEEcCCCCEEEEEeeccccccCCc---
Confidence 3 11111111111 12233443322 246888888887533221
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEEecCCCCCCCcccccCCCCCCCchHHHHHHHHHHHHcCCCccccccccCCCCCC
Q 011576 158 IQFKLQFFHVLQKRWEFLLCQGRRIFVVGDLNIAPAAIDRCDAGPDFAKNEFRIWFRSMLVESGGSFFDVFRSKHPERRE 237 (482)
Q Consensus 158 ~~~k~~fl~~L~~~i~~l~~~~~pvII~GDFN~~~~~~D~~~~~~~~~~~~~r~~l~~ll~~~g~~L~Dv~R~~~P~~~~ 237 (482)
..++ ..+..|.+.+. .-..|+|++||||+.+-..- .+.+..+ + ..+.+.... . .
T Consensus 205 ~~~~-~ql~~l~~~i~---~~~gpvIlaGDfNa~pWS~~-------------~~R~~~l----~--~~~~~~~aG-~--~ 258 (309)
T COG3021 205 DPQR-AQLLELGDQIA---GHSGPVILAGDFNAPPWSRT-------------AKRMAAL----G--GLRAAPRAG-L--W 258 (309)
T ss_pred cHHH-HHHHHHHHHHH---cCCCCeEEeecCCCcchhHH-------------HHHHHHh----c--ccccchhcc-C--C
Confidence 2333 34444444443 45699999999998653200 0122222 1 123222222 1 1
Q ss_pred ccccCCCCCCCcccCCcceEEEEEEcCCCccccccccccccccceeeeeeeeeccccCCCCCCCCccCCCCcCCCCCCCc
Q 011576 238 AYTCWPSNTGAEQFNYGTRIDHILCAGPCLHQKHDLQSHNFVTCHVNECDILIDYKRWKPGNAPRWKGGMSTRLEGSDHA 317 (482)
Q Consensus 238 ~yT~~s~~~~~~~~n~gsRID~Ilvs~~~l~~~~~l~~~~~~~~~V~~~~I~~~~~~~~~~~~~~w~~~~~~~~~~SDH~ 317 (482)
.+-++..... +-.|.+|||||.++ + .+.+...+.+ .+|||.
T Consensus 259 ~~~~~p~~~~---r~~g~PIDhvf~rg-l---------------~~~ka~rl~~--------------------~gSDH~ 299 (309)
T COG3021 259 EVRFTPDERR---RAFGLPIDHVFYRG-L---------------TVMKARRLPD--------------------RGSDHR 299 (309)
T ss_pred ccccCHHHHh---hccCCCcceeeecC-c---------------chhhhhhccc--------------------cCCCCC
Confidence 1222222111 12478899999988 3 4556665543 789999
Q ss_pred ceEEEEecC
Q 011576 318 PVYMCLGEV 326 (482)
Q Consensus 318 PV~~~l~~~ 326 (482)
||+++|...
T Consensus 300 PLLveF~~~ 308 (309)
T COG3021 300 PLLVEFSYG 308 (309)
T ss_pred ceEEEEEec
Confidence 999999763
No 18
>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B.
Probab=99.40 E-value=9.9e-13 Score=113.43 Aligned_cols=100 Identities=24% Similarity=0.368 Sum_probs=54.9
Q ss_pred EEEEEEEecCCCCCChhhHHHHHHHHHHHHHHHHHHHhCCCeEEEecCCCCCCCcccccCCCCCCCchHHHHHHHHHHHH
Q 011576 140 FILFNVYGPRADSEDTVRIQFKLQFFHVLQKRWEFLLCQGRRIFVVGDLNIAPAAIDRCDAGPDFAKNEFRIWFRSMLVE 219 (482)
Q Consensus 140 ~~l~nvY~P~~~~~~~~r~~~k~~fl~~L~~~i~~l~~~~~pvII~GDFN~~~~~~D~~~~~~~~~~~~~r~~l~~ll~~ 219 (482)
+.|+|||+|+... +..+++.|.+.+... ...++||+||||+.+..++.... .....+.|.+++.+
T Consensus 1 i~i~~vY~pp~~~--------~~~~~~~l~~~~~~~--~~~~~Ii~GDFN~~~~~w~~~~~-----~~~~~~~l~~~~~~ 65 (119)
T PF14529_consen 1 ITIISVYAPPSSE--------REEFFDQLRQLLKNL--PPAPIIIGGDFNAHHPNWDSSNT-----NSRRGEQLLDWLDS 65 (119)
T ss_dssp EEEEEEE--TTS---------CHHHHHHHHHHHHCC--TTSSEEEEEE-----GGGT-SCH-----HHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCcc--------HHHHHHHHHHHHHhC--CCCCEEEEeECCCCchhhhhccc-----cchhHHHHHHHhhh
Confidence 5799999999761 245677776666542 11299999999997666653211 10223457777777
Q ss_pred cCCCccccccccCCCCCCccccCCCCCCCcccCCcceEEEEEEcCCCcc
Q 011576 220 SGGSFFDVFRSKHPERREAYTCWPSNTGAEQFNYGTRIDHILCAGPCLH 268 (482)
Q Consensus 220 ~g~~L~Dv~R~~~P~~~~~yT~~s~~~~~~~~n~gsRID~Ilvs~~~l~ 268 (482)
.+ |.++ ++... .+||++..+ ++|||++|++..+..
T Consensus 66 ~~--l~~~----~~~~~-~~T~~~~~~-------~s~iD~~~~s~~~~~ 100 (119)
T PF14529_consen 66 HN--LVDL----NPPGR-PPTFISNSH-------GSRIDLILTSDNLLS 100 (119)
T ss_dssp CT--EEE-------TT----SEEECCC-------EE--EEEEEECCGCC
T ss_pred ce--eeee----ecCCC-CCcccCCCC-------CceEEEEEECChHHh
Confidence 76 7776 33222 489987653 689999999998743
No 19
>smart00476 DNaseIc deoxyribonuclease I. Deoxyribonuclease I catalyzes the endonucleolytic cleavage of double-stranded DNA. The enzyme is secreted outside the cell and also involved in apoptosis in the nucleus.
Probab=99.24 E-value=3e-10 Score=112.85 Aligned_cols=76 Identities=18% Similarity=0.249 Sum_probs=44.7
Q ss_pred CEEEEeeccCccccc----cccchHHHHHhhcCCcEEEEecccccccchhhHHH------hhcCCcEEEeecccCCCCCC
Q 011576 1 MKIVTYNVNGLRQRV----SQFGSLRKLLDSFDADIICFQETKLRRQELKSDLV------MADGYESFFSCTRTSDKGRT 70 (482)
Q Consensus 1 mrIlTwNVnGl~~~~----~r~~~l~~~L~~~~pDII~LQEtk~~~~~l~~~l~------~~~gY~~~~s~~~~~~~g~~ 70 (482)
|||+||||+...... .+...++++|+ ++|||++||+.-........++ ...+|..+.+.+ .|+.
T Consensus 18 l~I~SfNIr~fgd~k~~~~~r~~~i~~il~--~~DIiglQEV~d~q~~~l~~ll~~Ln~~~~~~Y~~v~s~r----~gr~ 91 (276)
T smart00476 18 LRICAFNIQSFGDSKMSNATLMSIIVKILS--RYDIALVQEVRDSDLSAVPKLMDQLNSDSPNTYSYVSSEP----LGRN 91 (276)
T ss_pred EEEEEEECcccCCccccHHHHHHHHHHHhc--cCCEEEEEEeecchhHHHHHHHHHHhhcCCCCceEEecCC----CCCC
Confidence 699999998543211 12334666666 8899999999753221111111 123687766543 2333
Q ss_pred c-ceEEEEEEecc
Q 011576 71 G-YSGVATFCRVK 82 (482)
Q Consensus 71 g-~~GVAIlsR~~ 82 (482)
+ .--.|+++|.+
T Consensus 92 ~~~E~~a~~Yr~d 104 (276)
T smart00476 92 SYKEQYLFLYRSD 104 (276)
T ss_pred CCCEEEEEEEecc
Confidence 2 23578888875
No 20
>COG5239 CCR4 mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification]
Probab=98.98 E-value=1.2e-08 Score=102.22 Aligned_cols=81 Identities=27% Similarity=0.373 Sum_probs=52.7
Q ss_pred CEEEEeeccC---cc-----------ccccccchHHHHHhhcCCcEEEEecccccc-cchhhHHHhhcCCcEEEeeccc-
Q 011576 1 MKIVTYNVNG---LR-----------QRVSQFGSLRKLLDSFDADIICFQETKLRR-QELKSDLVMADGYESFFSCTRT- 64 (482)
Q Consensus 1 mrIlTwNVnG---l~-----------~~~~r~~~l~~~L~~~~pDII~LQEtk~~~-~~l~~~l~~~~gY~~~~s~~~~- 64 (482)
++|||||+-. ++ ++-.|++.|.+.|..++|||+||||+.... ..+..+.+-..||+..|.....
T Consensus 31 ftimTYN~Laq~y~~r~~y~~s~~aL~W~~R~~~L~~EL~~Yn~Di~CLQEvd~~~~~~fw~~~l~~~gY~~if~~k~~k 110 (378)
T COG5239 31 FTIMTYNVLAQTYATRKMYPYSGWALKWSYRSRLLLQELLYYNADILCLQEVDAEDFEDFWKDQLGKLGYDGIFIPKERK 110 (378)
T ss_pred eEEEehhhhhhhhccccccCCchhhhhhHHHHHHHHHHHhccCCceeeeehhhhhHHHHHHHHHhcccccceEEecCCCc
Confidence 4799999932 11 122345568899999999999999997643 2244445667899987764321
Q ss_pred C----CCCCCcceEEEEEEec
Q 011576 65 S----DKGRTGYSGVATFCRV 81 (482)
Q Consensus 65 ~----~~g~~g~~GVAIlsR~ 81 (482)
. ....+.-.|++|+.+.
T Consensus 111 ~~~m~~~d~t~~dGc~if~k~ 131 (378)
T COG5239 111 VKWMIDYDTTKVDGCAIFLKR 131 (378)
T ss_pred ccccccccccccceEEEEEEe
Confidence 0 0011123599999987
No 21
>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues. Mg(2+)-dependent/Li(+)-sensitive enzymes.
Probab=98.97 E-value=2.7e-08 Score=100.99 Aligned_cols=157 Identities=20% Similarity=0.199 Sum_probs=81.5
Q ss_pred EEEEeeccCccccccccchHHHHHhh-------cCCcE--EEEecc-cccccc-----------hhhHHHhh----cCCc
Q 011576 2 KIVTYNVNGLRQRVSQFGSLRKLLDS-------FDADI--ICFQET-KLRRQE-----------LKSDLVMA----DGYE 56 (482)
Q Consensus 2 rIlTwNVnGl~~~~~r~~~l~~~L~~-------~~pDI--I~LQEt-k~~~~~-----------l~~~l~~~----~gY~ 56 (482)
-++||||+|....-.. .+.++|.. ..||| |+|||+ ...... ....+... ..|.
T Consensus 6 ~v~TwNv~~~~~~p~~--~l~~~l~~~~~~~~~~~pDI~viglQEi~~~~~~~~~~~~~~~~~~W~~~i~~~l~~~~~Y~ 83 (310)
T smart00128 6 LVGTWNVGGLKADPKV--DVTSWLFQKIDVKQSEKPDIYVIGLQEVVDLENGVLLETIAGKERLWSKLIESSLNGDGQYN 83 (310)
T ss_pred EEEEEECCCccCCChh--hHHHhhccccccccCCCCCEEEEEeeeecccchhhhhhccchhHHHHHHHHHHhcCCCCceE
Confidence 5789999997521121 36777765 67999 779998 221111 00111111 3344
Q ss_pred EEEeecccCCCCCCcceEEEEEEeccCCCCCcccccceeeeecccccccccCcccccCccccccccccccCCCCCEEEEe
Q 011576 57 SFFSCTRTSDKGRTGYSGVATFCRVKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGRCVITD 136 (482)
Q Consensus 57 ~~~s~~~~~~~g~~g~~GVAIlsR~~~~f~~~~~~~pi~v~~g~~g~~~~~~p~~~~gl~~~~~~~~~~~D~eGR~i~v~ 136 (482)
...+. .-+.-++.+|+|.........+ ....+..|+.+. .....|+.+.+.
T Consensus 84 ~v~~~-------~l~gi~l~vf~~~~~~~~i~~v-~~~~v~~G~~~~---------------------~~nKG~v~i~~~ 134 (310)
T smart00128 84 VLAKV-------RLVGILVLVFVKANHLVYIKDV-ETFTVKTGMGGL---------------------WGNKGAVAVRFK 134 (310)
T ss_pred EEeee-------eecceEEEEEEehhhcCcccee-Eeeeeeccccce---------------------eecCceEEEEEE
Confidence 43332 1233478888887532111100 000111122111 124456666666
Q ss_pred eC--eEEEEEEEecCCCCCChhhHHHHHHHHHHHHHHHHH----H--HhCCCeEEEecCCCCCCC
Q 011576 137 HG--HFILFNVYGPRADSEDTVRIQFKLQFFHVLQKRWEF----L--LCQGRRIFVVGDLNIAPA 193 (482)
Q Consensus 137 ~~--~~~l~nvY~P~~~~~~~~r~~~k~~fl~~L~~~i~~----l--~~~~~pvII~GDFN~~~~ 193 (482)
+. .+.++|+|+++.... .+.|..-+..+...+.- . ......+|++||||-..+
T Consensus 135 ~~~~~~~fv~~HL~a~~~~----~~~R~~~~~~I~~~~~f~~~~~~~~~~~d~~f~~GDlNyRi~ 195 (310)
T smart00128 135 LSDTSFCFVNSHLAAGASN----VEQRNQDYKTILRALSFPERAELSQFDHDVVFWFGDLNFRLD 195 (310)
T ss_pred EcCcEEEEEeeccccccch----hhhhHHHHHHHHHhcCCCCCccccccccceEEEecCcceeec
Confidence 54 599999999996642 23344444444332210 0 123578999999998655
No 22
>KOG1294 consensus Apurinic/apyrimidinic endonuclease and related enzymes [Replication, recombination and repair]
Probab=98.77 E-value=3.5e-08 Score=100.13 Aligned_cols=182 Identities=34% Similarity=0.405 Sum_probs=123.3
Q ss_pred ccccCCCCCEEEEeeCeEEEEEEEecCCCCCChhhHHHHHHHHHHHHHHHHHHHhCCCeEEEecCCCCCCCcccccCCCC
Q 011576 123 LLKIDSEGRCVITDHGHFILFNVYGPRADSEDTVRIQFKLQFFHVLQKRWEFLLCQGRRIFVVGDLNIAPAAIDRCDAGP 202 (482)
Q Consensus 123 ~~~~D~eGR~i~v~~~~~~l~nvY~P~~~~~~~~r~~~k~~fl~~L~~~i~~l~~~~~pvII~GDFN~~~~~~D~~~~~~ 202 (482)
+...|.+||+++.++..+++++||+|........+ +..|+..|..+++.+...+.++++ |+.+..++......
T Consensus 6 ~~~~~~~~~~~~~~k~~~~~~~v~~~~~~~e~~~~---~~~~~~~l~~r~~~~~~~g~~~~~----~i~~~~i~~~~~~~ 78 (335)
T KOG1294|consen 6 ALELDSEGRCVIVDKEMFVLINVYCPRNSPEISKR---RLRFAKVLHYRVEKLLKQGNRKVL----NICPWDIAGLEACE 78 (335)
T ss_pred hhhhhccCCeeeeecccccccceeccccCCcchhh---hhhhhhHHHHHHHHHHHhCCeeEe----ecCchhhhhhhhhh
Confidence 45688999999999988999999999988644433 789999999999999999999998 77776655433222
Q ss_pred CCCch-HHHHHHHHHHHHcCCC-ccccccccCCCCCCccccCCCCCCCcccCCcceEEEEEEcCCCcccccccccccccc
Q 011576 203 DFAKN-EFRIWFRSMLVESGGS-FFDVFRSKHPERREAYTCWPSNTGAEQFNYGTRIDHILCAGPCLHQKHDLQSHNFVT 280 (482)
Q Consensus 203 ~~~~~-~~r~~l~~ll~~~g~~-L~Dv~R~~~P~~~~~yT~~s~~~~~~~~n~gsRID~Ilvs~~~l~~~~~l~~~~~~~ 280 (482)
.+... ....++.+++...... .+|..+..+|. .+.||+|.........+++.++||+.+.+-..+
T Consensus 79 ~~~~~~~~~~~l~d~~~~~~t~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~y~~~~~~~~~~p~~v~------------ 145 (335)
T KOG1294|consen 79 KFSGDPEISSELRDLQCLLETKCTIDSGPCSHPT-EKGYTHSLLSCASKKDGYSGEIDYSKFKPLKVH------------ 145 (335)
T ss_pred ccccchhccccchhhhhhhhccceeccCcceecc-cCCcccceeecccccCCccceeeeeecccceee------------
Confidence 22111 0122333333221112 38888999999 556999988877777889999999988654321
Q ss_pred ceeeeeeeeeccccCCCCCCCCccCCCCcCCCCCCCcceEEEEecCCCCCCCCChhhHhhccccccchhHHHHHH
Q 011576 281 CHVNECDILIDYKRWKPGNAPRWKGGMSTRLEGSDHAPVYMCLGEVPEIPQHSTPSLASRYLPIIRGVQQTLVSV 355 (482)
Q Consensus 281 ~~V~~~~I~~~~~~~~~~~~~~w~~~~~~~~~~SDH~PV~~~l~~~~~~~~~~~~~l~~~~~~~~rg~~~~i~s~ 355 (482)
+. .+ ..+|||+||..-+... ..++.|...|.+.+-+.++.++--
T Consensus 146 -------~~---------------~~----~~~s~h~~~g~~i~~e-----~e~~~l~~~y~p~~~~~~~~~~~~ 189 (335)
T KOG1294|consen 146 -------YG---------------FG----AMGSDHRPVGRVIIAE-----FEIFILINTYVPNIGGGLVNLVYR 189 (335)
T ss_pred -------ec---------------cc----ccCCccCccceEEEEe-----ecceeeccccCcccccccchhhhh
Confidence 10 00 1489999998866443 233556666777665555554433
No 23
>KOG0620 consensus Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins [Transcription]
Probab=98.70 E-value=4.7e-08 Score=100.63 Aligned_cols=86 Identities=22% Similarity=0.316 Sum_probs=52.4
Q ss_pred CEEEEeeccCcc---------------ccccccchHHHHHhhcCCcEEEEecccccccchhhHHHhhcCCcEEEeecccC
Q 011576 1 MKIVTYNVNGLR---------------QRVSQFGSLRKLLDSFDADIICFQETKLRRQELKSDLVMADGYESFFSCTRTS 65 (482)
Q Consensus 1 mrIlTwNVnGl~---------------~~~~r~~~l~~~L~~~~pDII~LQEtk~~~~~l~~~l~~~~gY~~~~s~~~~~ 65 (482)
++|+|||+.... .+..|+..+.+.|...+|||+||||+ .....+....+...||...|......
T Consensus 20 ~~v~s~n~l~~~~~~~~~~~~~~~~~~~w~~r~~~~~~ei~~~~ad~icLqev-~~~~~~~~p~l~~~gY~g~~~~k~~~ 98 (361)
T KOG0620|consen 20 FTVLSYNILSQLYATSKLYMYCPSWALSWEYRRQLLLEEILNYNADILCLQEV-DRYHDFFSPELEASGYSGIFIEKTRM 98 (361)
T ss_pred EEeechhhhhhhhcccCCCcccchhhccHHHHHHHHHHHHhCCCcceeecchh-hHHHHHccchhhhcCCcceeeccccc
Confidence 378899984321 11123456888899999999999998 22223322234455999988742100
Q ss_pred -CCCCCcceEEEEEEeccCCCCCc
Q 011576 66 -DKGRTGYSGVATFCRVKSPFSST 88 (482)
Q Consensus 66 -~~g~~g~~GVAIlsR~~~~f~~~ 88 (482)
....++-.|+||+.|.. .|++.
T Consensus 99 ~~~~~~~~dGcaiffk~s-~f~li 121 (361)
T KOG0620|consen 99 GEVELEKIDGCAIFFKPS-LFQLI 121 (361)
T ss_pred chhhcccCceeeeeecch-HHhhh
Confidence 01133357999999874 45543
No 24
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.19 E-value=1.9e-05 Score=87.55 Aligned_cols=51 Identities=16% Similarity=0.293 Sum_probs=29.9
Q ss_pred CeEEEEEEEecCCCCCChhhHHHHHHHHHHHHHHHHH----HHhCCCeEEEecCCCCCC
Q 011576 138 GHFILFNVYGPRADSEDTVRIQFKLQFFHVLQKRWEF----LLCQGRRIFVVGDLNIAP 192 (482)
Q Consensus 138 ~~~~l~nvY~P~~~~~~~~r~~~k~~fl~~L~~~i~~----l~~~~~pvII~GDFN~~~ 192 (482)
..|.+++-|+-++... .+.|..-++.+.+-+.- .+..+..|++|||||-..
T Consensus 673 TsfCFv~SHlAAG~sn----v~ERn~DY~tI~r~l~Fp~Gr~I~~HD~ifW~GDFNYRI 727 (1080)
T KOG0566|consen 673 TSFCFVCSHLAAGQSN----VEERNEDYKTIARKLRFPRGRMIFSHDYIFWLGDFNYRI 727 (1080)
T ss_pred ccEEEEecccccccch----HhhhhhhHHHHHHhccccCCccccCCceEEEecccceee
Confidence 4688899998776643 22233333333332211 123457899999999654
No 25
>COG2374 Predicted extracellular nuclease [General function prediction only]
Probab=97.75 E-value=0.00045 Score=75.69 Aligned_cols=84 Identities=17% Similarity=0.171 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHHHH--hCCCeEEEecCCCCCCCcccccCCCCCCCchHHHHHHHHHHHHcCCCccccccccCCCCC
Q 011576 159 QFKLQFFHVLQKRWEFLL--CQGRRIFVVGDLNIAPAAIDRCDAGPDFAKNEFRIWFRSMLVESGGSFFDVFRSKHPERR 236 (482)
Q Consensus 159 ~~k~~fl~~L~~~i~~l~--~~~~pvII~GDFN~~~~~~D~~~~~~~~~~~~~r~~l~~ll~~~g~~L~Dv~R~~~P~~~ 236 (482)
..|.+...+|..++.... ....+++|+||||.-..+ . .++ .|+..| +...--.+++...
T Consensus 652 ~~R~~~AqaL~~~la~~~~~~~d~~~viLGD~N~y~~e-----------d-----pI~-~l~~aG--y~~l~~~~~~~~~ 712 (798)
T COG2374 652 QTRVRAAQALAAFLATNPTGKADADIVILGDFNDYAFE-----------D-----PIQ-ALEGAG--YMNLAARFHDAGD 712 (798)
T ss_pred hHHHHHHHHHHHHHhhCcccccCCCEEEEeccchhhhc-----------c-----HHH-HHhhcC--chhhhhhccCCCC
Confidence 356666777777776432 236799999999953211 0 112 233333 4444334443322
Q ss_pred CccccCCCCCCCcccCCcceEEEEEEcCCCccc
Q 011576 237 EAYTCWPSNTGAEQFNYGTRIDHILCAGPCLHQ 269 (482)
Q Consensus 237 ~~yT~~s~~~~~~~~n~gsRID~Ilvs~~~l~~ 269 (482)
.|+|.- .. ...-+||+|++.++.++
T Consensus 713 -~YSY~f---~G----~~gtLDhaLas~sl~~~ 737 (798)
T COG2374 713 -RYSYVF---NG----QSGTLDHALASASLAAQ 737 (798)
T ss_pred -ceEEEE---CC----ccchHhhhhhhhhhhhh
Confidence 355532 11 13459999999988774
No 26
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional
Probab=95.97 E-value=0.1 Score=56.87 Aligned_cols=17 Identities=29% Similarity=0.196 Sum_probs=14.4
Q ss_pred CCCCCCcceEEEEecCC
Q 011576 311 LEGSDHAPVYMCLGEVP 327 (482)
Q Consensus 311 ~~~SDH~PV~~~l~~~~ 327 (482)
+..|||.||++.|.+..
T Consensus 577 i~~SDHRPV~A~F~v~V 593 (621)
T PLN03191 577 IRLSDHRPVSSMFLVEV 593 (621)
T ss_pred cccCCchhcceEEEEEE
Confidence 47899999999998754
No 27
>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms]
Probab=91.06 E-value=0.35 Score=50.69 Aligned_cols=51 Identities=20% Similarity=0.246 Sum_probs=28.0
Q ss_pred CeEEEEEEEecCCCCCChhhHHHHHHHHHHHHHHHHH----HHhCCCeEEEecCCCCCC
Q 011576 138 GHFILFNVYGPRADSEDTVRIQFKLQFFHVLQKRWEF----LLCQGRRIFVVGDLNIAP 192 (482)
Q Consensus 138 ~~~~l~nvY~P~~~~~~~~r~~~k~~fl~~L~~~i~~----l~~~~~pvII~GDFN~~~ 192 (482)
..+.++|.|+-++... .+.|..-++-+..-+.- -+.....++++||||-..
T Consensus 165 t~~cFv~shlaag~~N----~eeR~~Dy~~I~~~i~f~~g~~I~~hdti~w~GDlNyRV 219 (460)
T COG5411 165 TSFCFVNSHLAAGVNN----IEERIFDYRSIASNICFSRGLRIYDHDTIFWLGDLNYRV 219 (460)
T ss_pred CCcEEEecchhccccc----HHHHHHHHHHHHHheecCCCceecccceEEEecccCcee
Confidence 4688888888765542 22233333333322211 012346799999999643
No 28
>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional
Probab=80.14 E-value=4.6 Score=40.54 Aligned_cols=56 Identities=13% Similarity=0.126 Sum_probs=36.8
Q ss_pred CeEEEEEEEecCCCCCChhh-------HHHHHHHHHHHHHHHHHHHhCCCeEEEecCCCCCCC
Q 011576 138 GHFILFNVYGPRADSEDTVR-------IQFKLQFFHVLQKRWEFLLCQGRRIFVVGDLNIAPA 193 (482)
Q Consensus 138 ~~~~l~nvY~P~~~~~~~~r-------~~~k~~fl~~L~~~i~~l~~~~~pvII~GDFN~~~~ 193 (482)
..|.++|+|+-+....-.++ ...|.+-+......+........++++.||||-..+
T Consensus 80 t~fdfVNiHLFHDaSNl~A~~tSPSiYS~~RqrAL~~iL~r~~~~~~~~~~lF~fGDfNyRld 142 (356)
T PTZ00312 80 VVVNVLNVHLYNDDDNRVAAASSPSLYTGQRQEALLEAIAECSAFISPSDPLFIFGDFNVRLD 142 (356)
T ss_pred EEEEEEEeeccCCcchhhHHhcCCchhHHHHHHHHHHHHHHHhhccCCCCcEEEeccceeeec
Confidence 35899999998765421111 123444555555455555567789999999998765
No 29
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional
Probab=73.05 E-value=2.9 Score=45.93 Aligned_cols=36 Identities=33% Similarity=0.406 Sum_probs=25.9
Q ss_pred EEEEeeccCccccccccchHHHHHhhcCC-c--EEEEeccc
Q 011576 2 KIVTYNVNGLRQRVSQFGSLRKLLDSFDA-D--IICFQETK 39 (482)
Q Consensus 2 rIlTwNVnGl~~~~~r~~~l~~~L~~~~p-D--II~LQEtk 39 (482)
-|+||||+|-..+..- .+.+||....| | ||+|||+-
T Consensus 111 ~v~TWNV~g~~p~~~l--~l~~wl~~~~p~DiyviG~QE~v 149 (621)
T PLN03191 111 TIGTWNVAGRLPSEDL--EIEDWLSTEEPADIYIIGFQEVV 149 (621)
T ss_pred EEEEeecCCCCCcccC--CHHHhccCCCCCCEEEEeeEEec
Confidence 3689999997654332 37888876665 7 57789984
No 30
>KOG1976 consensus Inositol polyphosphate 5-phosphatase, type I [Lipid transport and metabolism]
Probab=36.31 E-value=77 Score=32.18 Aligned_cols=58 Identities=19% Similarity=0.159 Sum_probs=33.2
Q ss_pred eCeEEEEEEEecCCCCC------ChhhH-HHHHHHHHHHHHHHHHHHhCCCeEEEecCCCCCCCc
Q 011576 137 HGHFILFNVYGPRADSE------DTVRI-QFKLQFFHVLQKRWEFLLCQGRRIFVVGDLNIAPAA 194 (482)
Q Consensus 137 ~~~~~l~nvY~P~~~~~------~~~r~-~~k~~fl~~L~~~i~~l~~~~~pvII~GDFN~~~~~ 194 (482)
...|.++|+|+-+.... .+... ..|.+.++.+.+.+..-.-...-+++.||||..++.
T Consensus 168 ~k~fdfVN~hLFhD~snla~~~sspt~ys~~R~~al~~vL~el~~~~~~~~~~fVfGdfNfrLds 232 (391)
T KOG1976|consen 168 GKEFDFVNLHLFHDVSNLATKNSSPTKYSSKREQALEMVLKELDEEGLRNDAIFVFGDFNFRLDS 232 (391)
T ss_pred CceeeeeehhhhcchhhhhhhcCChhhhhhhHHHHHHHHHHHHHhhccCceEEEEecccccccch
Confidence 45789999998553320 11111 124445555555444322234578899999987765
Done!