Query 011580
Match_columns 482
No_of_seqs 136 out of 1469
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 11:06:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011580.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011580hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l1l_A Arginine/agmatine antip 99.8 6.7E-17 2.3E-21 164.7 29.0 366 33-438 5-380 (445)
2 3gia_A Uncharacterized protein 99.6 5.2E-13 1.8E-17 135.8 30.6 355 34-437 4-369 (444)
3 4djk_A Probable glutamate/gamm 99.5 5.9E-12 2E-16 130.4 29.5 284 31-340 6-305 (511)
4 2jln_A MHP1; hydantoin, transp 98.7 8.7E-06 3E-10 83.4 27.7 246 35-305 24-279 (501)
5 3dh4_A Sodium/glucose cotransp 98.1 0.0073 2.5E-07 62.1 31.3 152 35-207 19-172 (530)
6 2xq2_A Sodium/glucose cotransp 97.5 0.091 3.1E-06 54.7 29.0 152 35-207 48-201 (593)
7 3l1l_A Arginine/agmatine antip 41.1 2.5E+02 0.0084 26.9 13.4 48 105-152 260-307 (445)
8 3gia_A Uncharacterized protein 27.3 2.2E+02 0.0076 27.2 9.2 47 106-152 259-305 (444)
9 2a65_A Leutaa, Na(+):neurotran 25.3 5.2E+02 0.018 25.8 31.2 30 39-68 10-40 (519)
10 4ain_A Glycine betaine transpo 20.2 6.6E+02 0.023 25.1 22.4 103 35-139 93-215 (539)
No 1
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=99.78 E-value=6.7e-17 Score=164.73 Aligned_cols=366 Identities=13% Similarity=0.009 Sum_probs=214.9
Q ss_pred CccccchHHHHHHHHHhhhhhhhhhHHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHchhcCCCCCCcccccHHHHHH
Q 011580 33 RLKRTGTLWTASAHIITAVIGSGVLSLAWATAQLGWIAGPSVMFLFSFVTYYTSTLLAACYRSGDPVTGKRNYTYVDAVR 112 (482)
Q Consensus 33 ~~~~~~s~~~a~~~l~~~~iG~GiLslP~af~~~G~~~gii~~~~~~~~~~~t~~~l~~~~~~~~~~~g~~~~~y~~l~~ 112 (482)
+++|+.+.++.+...+++++|+|++.+|....+.|.. +++..++.+++....+..+.|...+.+ +.| .+.+..+
T Consensus 5 ~~~r~l~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~~-~~~~~li~~~~~~~~a~~~~el~~~~p-~~G----g~y~~~~ 78 (445)
T 3l1l_A 5 ADAHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGGI-AIYGWLVTIIGALGLSMVYAKMSFLDP-SPG----GSYAYAR 78 (445)
T ss_dssp --CCCBCHHHHHHHHHHHHCSSHHHHHHHHHHHHCTH-HHHHHHHHHHHHHHHHHHHHHHHHHCC-CTT----THHHHHH
T ss_pred CCCCcccHHHHHHHHHHhHHhhhHHhhHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHccCC-CCC----CchhhHH
Confidence 4567889999999999999999999999999888874 788888899999999988888776644 333 5566778
Q ss_pred hhhcCcceeehHHHHHHHHHHHHHHHHHHhhhhhHHhhhhccccCCCCCCCCccCCCchhH-HHHHHHHHhhcCCCcchh
Q 011580 113 SNLGGFQVKICGLVQYLNLFGVAIGYTIASSISMMAIERSNCFHSKGDKNPCHMNSNPYMI-AFGIVEIVLSQIPDFDQL 191 (482)
Q Consensus 113 ~~~G~~~~~i~~~~~~~~~~g~~~~y~i~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~-i~~~i~~pl~~~~~l~~l 191 (482)
+.+||+.+++..+..++........+....++++...++... . .+ ..+.+ +..+++.-....+..|..
T Consensus 79 ~~~G~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~--~~--~~~~~~~~~~~~~~~in~~g~~~~ 147 (445)
T 3l1l_A 79 RCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILK-------D--PW--VLTITCVVVLWIFVLLNIVGPKMI 147 (445)
T ss_dssp HHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCGGGG-------S--HH--HHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred hHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcccc-------c--cH--HHHHHHHHHHHHHHHHHHhchHHH
Confidence 999999999999999988888888888888887776554210 0 01 01111 122222223344556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccccccccchhhHHHHHHHHHHHHHHhcccchhHhhHhhhCCC
Q 011580 192 WWLSIVAAVMSFTYSTIGLGLGIAKVAETGKFRGSLTGISIGTVSETQKIWRSFQALGDIAFAYSYSIILIEIQDTVKSP 271 (482)
Q Consensus 192 ~~~s~~~~~~~~~~~~i~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~faf~~~~~i~~i~~~m~~p 271 (482)
.++..+.....+...++.+...+.. ..+ +...+. +. ......+.++..++....|+|.|.+.+....+|+|||
T Consensus 148 ~~~~~~~~~~~i~~~~~~~i~~~~~---~~~-~~~~~~--~~-~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~e~k~p 220 (445)
T 3l1l_A 148 TRVQAVATVLALIPIVGIAVFGWFW---FRG-ETYMAA--WN-VSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNP 220 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSTT---CCC-CCCCCC--------------HHHHHHHHHHTTTTTTHHHHGGGGBSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---hCh-hhcccc--cC-ccCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCc
Confidence 6665555444433222222111111 111 100011 11 0111124467788999999999999999999999999
Q ss_pred CccccchhhHHHHHHHHHHHHHHHHHhHHhhhcCCCcccc----cccccccCCCchHHHHHHHHHHHHHHHhhhhcccch
Q 011580 272 PSESKTMKKASLISVGVTTLFYMLCGCFGYAAFGDLSPGN----LLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPL 347 (482)
Q Consensus 272 ~~~~~~~~~~~~~s~~~~~i~Y~~~g~~gy~~fG~~~~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~s~pl~~~p~ 347 (482)
+ |+.+|++..+..++.++|++..+......+.+...+ ...-+......+...+..+...+....+.--.....
T Consensus 221 ~---r~ip~a~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (445)
T 3l1l_A 221 K---RNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLA 297 (445)
T ss_dssp H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTSCSTTCTHHHHHHHHHCTTHHHHHHHHHHHHHTTTHHHHHHHH
T ss_pred c---ccccHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhccCcHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 789999999999999999999888777766542211 111000001234444555555555555543333333
Q ss_pred HHHHHHHhhh-hCCCCcccccccccCCCCCcccccchhHHHHHHHHHHHHHHHHHhcc----chHHHHHHhhhhhhhhhH
Q 011580 348 FAFIEKQAHQ-RFPDSEFITKDIKVPIPGFKCYNLNLFRLVWRTIFVILTTVISMLLP----FFNDVVGLLGALGFWPLT 422 (482)
Q Consensus 348 ~~~~~~~~~~-~~~~s~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ia~~ip----~~~~v~~l~Ga~~~~~l~ 422 (482)
-+.+...-.+ ..|+ +..+.++.+.| ...+.+..++.. ...+....| .++.+.++.+ ....+.
T Consensus 298 sR~~~~~a~dg~lP~--~~~~~~~~~~P--------~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~ 364 (445)
T 3l1l_A 298 GQTAKAAADDGLFPP--IFARVNKAGTP--------VAGLIIVGILMT-IFQLSSISPNATKEFGLVSSVSV--IFTLVP 364 (445)
T ss_dssp HHHHHHHHHTTSSCG--GGGCCCTTCCC--------HHHHHHHHHHHH-HHHHSTTSHHHHCCCHHHHHHHH--HHHHHH
T ss_pred HHHHHHHHhCCCCcH--HHHhcCCCCCC--------HHHHHHHHHHHH-HHHHHHHcccHHHHHHHHHHHHH--HHHHHH
Confidence 3333332211 1221 11222111222 222222222111 111111122 3566666654 345788
Q ss_pred hhhhHHHHHHHhCCCc
Q 011580 423 VYFPVEMYIAQKKIPK 438 (482)
Q Consensus 423 ~ilP~~~~l~~~~~~~ 438 (482)
|.++++.+++.+++++
T Consensus 365 y~~~~~~~~~~r~~~~ 380 (445)
T 3l1l_A 365 YLYTCAALLLLGHGHF 380 (445)
T ss_dssp HHHHHHHHHHHHSSSS
T ss_pred HHHHHHHHHHHhhcCc
Confidence 9999999999887654
No 2
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=99.61 E-value=5.2e-13 Score=135.84 Aligned_cols=355 Identities=8% Similarity=0.017 Sum_probs=206.5
Q ss_pred ccccchHHHHHHHHHhhhhhhhhhHHH-HHHHhhChhhHHHHHHHHHHHHHHHHHHHHHchhcCCCCCCcccccHHHHHH
Q 011580 34 LKRTGTLWTASAHIITAVIGSGVLSLA-WATAQLGWIAGPSVMFLFSFVTYYTSTLLAACYRSGDPVTGKRNYTYVDAVR 112 (482)
Q Consensus 34 ~~~~~s~~~a~~~l~~~~iG~GiLslP-~af~~~G~~~gii~~~~~~~~~~~t~~~l~~~~~~~~~~~g~~~~~y~~l~~ 112 (482)
++|+.+.++.+...+++++|+|++..| .+....|. ..++.+++.+++....+..+.|...+.+. .| ...+.++
T Consensus 4 ~~r~l~~~~~~~l~~g~~iG~gi~~~~~~~~~~~G~-~~~~~~li~~~~~~~~~~~~~el~~~~P~-~G----g~y~~~~ 77 (444)
T 3gia_A 4 KNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGR-NLPETFILSGIYALLVAYSYTKLGAKIVS-NA----GPIAFIH 77 (444)
T ss_dssp CCCCBCHHHHHHHHHHHHHHHHTTTSHHHHHHHHGG-GHHHHHHHHHHHHHHHHHHHHHHHTTCCC-TT----THHHHHH
T ss_pred cCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHhhCCC-CC----cHHHhHH
Confidence 567889999999999999999999876 44556676 68888999999999999999997765443 33 4567788
Q ss_pred hhhcCcc-eeehHHHHHHHHHHHHHHHHHHhhhhhHHhhhhccccCCCCCCCCccCCCchhH---HHHHHHHHhhcCCCc
Q 011580 113 SNLGGFQ-VKICGLVQYLNLFGVAIGYTIASSISMMAIERSNCFHSKGDKNPCHMNSNPYMI---AFGIVEIVLSQIPDF 188 (482)
Q Consensus 113 ~~~G~~~-~~i~~~~~~~~~~g~~~~y~i~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~---i~~~i~~pl~~~~~l 188 (482)
+.+|+++ ...+.+..++........+....++++..+++. ....++.. +..++++-....+..
T Consensus 78 ~~~G~~~~~g~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~in~~g~ 144 (444)
T 3gia_A 78 KAIGDNIITGALSILLWMSYVISIALFAKGFAGYFLPLINA-------------PINTFNIAITEIGIVAFFTALNFFGS 144 (444)
T ss_dssp HHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------------CCCHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------------CCchHHHHHHHHHHHHHHHHHHHHhH
Confidence 8999962 223356666666667777777888888776641 01112211 122222233344556
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccccccccchhhHHHHHHHHHHHHHHhcccchhHhhHhhh
Q 011580 189 DQLWWLSIVAAVMSFTYSTIGLGLGIAKVAETGKFRGSLTGISIGTVSETQKIWRSFQALGDIAFAYSYSIILIEIQDTV 268 (482)
Q Consensus 189 ~~l~~~s~~~~~~~~~~~~i~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~faf~~~~~i~~i~~~m 268 (482)
|...++..+.....+...++.+...+... .+.+ +.+...+..+.+++.++....|+|.|.+.+....+|+
T Consensus 145 ~~~~~~~~~~~~~~i~~~~~~ii~~~~~~---~~~~-------~~~~~~~~g~~~~~~~~~~~~~a~~G~e~~~~~~~e~ 214 (444)
T 3gia_A 145 KAVGRAEFFIVLVKLLILGLFIFAGLITI---HPSY-------VIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHI 214 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CGGG-------TSCCCSHHHHHHHHHHHHHGGGGGTHHHHHHTTGGGB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc---Chhh-------cCCCCCCcchHHHHHHHHHHHHHHHhHHHHHHHHHHc
Confidence 66666665555544443332222222221 1111 1111112344567788888999999999999999999
Q ss_pred CCCCccccchhhHHHHHHHHHHHHHHHHHhHHhhhcCCCcc----cccccc-cccCCCchHHHHHHHHHHHHHHHhhhhc
Q 011580 269 KSPPSESKTMKKASLISVGVTTLFYMLCGCFGYAAFGDLSP----GNLLTG-FGFYNPYWLLDIANAAIVIHLVGAYQVF 343 (482)
Q Consensus 269 ~~p~~~~~~~~~~~~~s~~~~~i~Y~~~g~~gy~~fG~~~~----~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~s~pl~ 343 (482)
|||+ |+.+|++..+..++.++|++..+......+.+.- ++.... .......+...+..+...+....+.--.
T Consensus 215 k~P~---r~ip~ai~~~~~~~~~~y~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~ 291 (444)
T 3gia_A 215 ENPK---KNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNAT 291 (444)
T ss_dssp SSHH---HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcc---cchhHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHhcccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9996 7899999999999999999988776665553210 000000 0000012333344444444444444333
Q ss_pred ccchHHHHHHHhhh-hCCCCcccccccccCCCCCcccccchhHHHHHHHHHHHHHHHHHhccchHHHHHHhhhhhhhhhH
Q 011580 344 CQPLFAFIEKQAHQ-RFPDSEFITKDIKVPIPGFKCYNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLT 422 (482)
Q Consensus 344 ~~p~~~~~~~~~~~-~~~~s~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ia~~ip~~~~v~~l~Ga~~~~~l~ 422 (482)
+...-+.+...-.+ ..|+ . ..+.++ +.| ...+.+. .+.+.+++.. .+++.+.++.+. +..+.
T Consensus 292 ~~~~sR~l~a~a~dg~lP~-~-f~~~~~-~~P--------~~a~~~~---~~~~~~~~~~-~~~~~l~~~~~~--~~~~~ 354 (444)
T 3gia_A 292 IYGGANVAYSLAKDGELPE-F-FERKVW-FKS--------TEGLYIT---SALGVLFALL-FNMEGVASITSA--VFMVI 354 (444)
T ss_dssp HTTTHHHHHHHHHHSSCCS-S-CCTTSC-CSC--------THHHHHH---HHHHHHHHHH-SCHHHHHHHHHH--HHHHH
T ss_pred HHHHHHHHHHHHHCCCCCH-H-HhCCCC-CCC--------cHHHHHH---HHHHHHHHHH-cCHHHHHHHHHH--HHHHH
Confidence 33333333332221 2232 1 111110 112 2222222 1222222222 367777777543 45788
Q ss_pred hhhhHHHHHHHhCCC
Q 011580 423 VYFPVEMYIAQKKIP 437 (482)
Q Consensus 423 ~ilP~~~~l~~~~~~ 437 (482)
|.++.+.+++.++++
T Consensus 355 ~~~~~~~~~~~r~~~ 369 (444)
T 3gia_A 355 YLFVILSHYILIDEV 369 (444)
T ss_dssp HHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHhhhcC
Confidence 888888888876643
No 3
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=99.53 E-value=5.9e-12 Score=130.44 Aligned_cols=284 Identities=11% Similarity=-0.011 Sum_probs=159.4
Q ss_pred CCCccccchHHHHHHHHHhhhhhhhhhHHHHHHHhhChhhHHHHHHHHHHHHH-HHHHHHHHchh--cCCCCCCcccccH
Q 011580 31 DGRLKRTGTLWTASAHIITAVIGSGVLSLAWATAQLGWIAGPSVMFLFSFVTY-YTSTLLAACYR--SGDPVTGKRNYTY 107 (482)
Q Consensus 31 ~~~~~~~~s~~~a~~~l~~~~iG~GiLslP~af~~~G~~~gii~~~~~~~~~~-~t~~~l~~~~~--~~~~~~g~~~~~y 107 (482)
+.+.+|+.+.++.+...++.++| +.++|. ....|.. .++..++.+++.. ..+..+.|... ..+ .| ..
T Consensus 6 ~~~~~r~l~~~~~~~l~~~~~ig--~~~~~~-~~~~G~~-~~~~~~i~~~~~~l~~al~~ael~s~~~~P--~G----G~ 75 (511)
T 4djk_A 6 QTGKAKQLTLLGFFAITASMVMA--VYEYPT-FATSGFS-LVFFLLLGGILWFIPVGLCAAEMATVDGWE--EG----GV 75 (511)
T ss_dssp ------CCCHHHHHHHTGGGGCC--GGGHHH-HHTTTTH-HHHHHHHHHHHTHHHHHHHHHHHHTTSCC---------CH
T ss_pred cCccCccccHHHHHHHHHHHHHh--hchhHH-HHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHcccccCC--CC----Ch
Confidence 33567888999999999999986 567775 4566653 4444444444433 36777777666 543 44 55
Q ss_pred HHHHHhhhcCcceeehHHHHHHHHHHHHHHHHHHhhhhhHHhhhhccccCCCCCCCCccCCCc--hhH-HHHHHHHHhhc
Q 011580 108 VDAVRSNLGGFQVKICGLVQYLNLFGVAIGYTIASSISMMAIERSNCFHSKGDKNPCHMNSNP--YMI-AFGIVEIVLSQ 184 (482)
Q Consensus 108 ~~l~~~~~G~~~~~i~~~~~~~~~~g~~~~y~i~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~--~~~-i~~~i~~pl~~ 184 (482)
...+++.+||+.+++..+..++.......++....++.+..++....+ . ...+ +.+ +..+++.-+..
T Consensus 76 y~~~~~~~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---------~-~~~~~~~~~~~~~~~~~~~in 145 (511)
T 4djk_A 76 FAWVSNTLGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKWPAL---------N-EDPITKTIAALIILWALALTQ 145 (511)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTTTCGGG---------T-SCSSHHHHHHHHHHHHHHHHH
T ss_pred hhhHHhhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc---------c-cCcHHHHHHHHHHHHHHHHHH
Confidence 667789999999999999988888777777777777766544311000 0 1112 111 12222223334
Q ss_pred CCCcchhHHHHHHHHHHHHH-HHHHHHHHHHHhhhhcCCCCCCccccccccccchhhHHHHHHHHHHHHHHhcccchhHh
Q 011580 185 IPDFDQLWWLSIVAAVMSFT-YSTIGLGLGIAKVAETGKFRGSLTGISIGTVSETQKIWRSFQALGDIAFAYSYSIILIE 263 (482)
Q Consensus 185 ~~~l~~l~~~s~~~~~~~~~-~~~i~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~faf~~~~~i~~ 263 (482)
.+..+...++..+.....+. ..++.+...+.....+.+.+.. .++++..+.....+.+.++....|+|.|...+..
T Consensus 146 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~G~e~~~~ 222 (511)
T 4djk_A 146 FGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGAPVAIE---MDSKTFFPDFSKVGTLVVFVAFILSYMGVEASAT 222 (511)
T ss_dssp HTCSSSHHHHTHHHHHHTTHHHHHHHHHHHHHHTC---------------CCCCCTTSTTTTTTHHHHHHHHTTGGGGTG
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc---CcccccCCCcccchHHHHHHHHHHHHhhHHHHHH
Confidence 45566666655544333111 1112222222222111111000 0111111111112334567788999999999999
Q ss_pred hHhhhCCCCccccchhhHHHHHHHHHHHHHHHHHhHHhhhcCCCcccc---cc----cccccCC--CchHHHHHHHHHHH
Q 011580 264 IQDTVKSPPSESKTMKKASLISVGVTTLFYMLCGCFGYAAFGDLSPGN---LL----TGFGFYN--PYWLLDIANAAIVI 334 (482)
Q Consensus 264 i~~~m~~p~~~~~~~~~~~~~s~~~~~i~Y~~~g~~gy~~fG~~~~~~---i~----~~~~~~~--~~~~~~~~~~~~~~ 334 (482)
..+|+|||+ |+.+|++..++.++.++|++..+......+++.... .. .-++... ..|...+..+...+
T Consensus 223 ~a~E~k~P~---k~ip~ai~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 299 (511)
T 4djk_A 223 HVNEMSNPG---RDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLL 299 (511)
T ss_dssp GGSSSSCCT---TTHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTSCCSSSTHHHHHHHHHSSSCSSCTTHHHHHHHHHHH
T ss_pred HHHhccCcc---cchhHHHHHHHHHHHHHHHHHHHHHHeecCHhhccccchHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 999999997 789999999999999999999888777776543211 10 0011111 24555566666666
Q ss_pred HHHHhh
Q 011580 335 HLVGAY 340 (482)
Q Consensus 335 ~~~~s~ 340 (482)
....+.
T Consensus 300 ~~~~~~ 305 (511)
T 4djk_A 300 GVLAEI 305 (511)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665554
No 4
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=98.70 E-value=8.7e-06 Score=83.45 Aligned_cols=246 Identities=12% Similarity=0.059 Sum_probs=132.8
Q ss_pred cccchHHHHHHHHHhhhhhhhhhHHHHHHHh-hChhhHHHHHHHHHHHHHHHHHHHHHchhcCCCCCCcccccHHHHHHh
Q 011580 35 KRTGTLWTASAHIITAVIGSGVLSLAWATAQ-LGWIAGPSVMFLFSFVTYYTSTLLAACYRSGDPVTGKRNYTYVDAVRS 113 (482)
Q Consensus 35 ~~~~s~~~a~~~l~~~~iG~GiLslP~af~~-~G~~~gii~~~~~~~~~~~t~~~l~~~~~~~~~~~g~~~~~y~~l~~~ 113 (482)
+|+.++++.+..-++..++.+.+.+...+.. .++..+++.+++..++...-.-++.....+ .| .++.++.+.
T Consensus 24 ~R~~~~~~~~~~W~g~~~~i~~~~~Ga~~~~GLs~~~a~lai~lG~li~~~~~~l~~~~G~~----~G---l~~~v~~R~ 96 (501)
T 2jln_A 24 ERSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAIR----WG---INFTVAARM 96 (501)
T ss_dssp GCCBCHHHHHHHHHHHHCSTHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTHHHHH----HC---CCHHHHTTT
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHhHHHhh----cC---CChhhhhHh
Confidence 4556777777777777777766666655543 223444554444444444333333332222 22 379999999
Q ss_pred hhcCcceeehHHHHHHHHHHHHHHHHHHhhhhhHHhhhhccccCCCCCCCCccCCCchhHHHHHHHHHhhcCCCcchhHH
Q 011580 114 NLGGFQVKICGLVQYLNLFGVAIGYTIASSISMMAIERSNCFHSKGDKNPCHMNSNPYMIAFGIVEIVLSQIPDFDQLWW 193 (482)
Q Consensus 114 ~~G~~~~~i~~~~~~~~~~g~~~~y~i~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~pl~~~~~l~~l~~ 193 (482)
.||+++..+..+...+..+|-........++.+..+++... + ..+...+.+++.++.+++. ....+.+++
T Consensus 97 ~FG~~Gs~i~~ll~~i~~igw~~v~~~~gg~al~~~~~~~~-g--------~~~~~v~~~i~~~l~~~~~-~~G~~~i~~ 166 (501)
T 2jln_A 97 PFGIRGSLIPITLKALLSLFWFGFQTWLGALALDEITRLLT-G--------FTNLPLWIVIFGAIQVVTT-FYGITFIRW 166 (501)
T ss_dssp TSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-C--------CCCHHHHHHHHHHHHHHHH-TTHHHHHHH
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C--------cchHHHHHHHHHHHHHHHH-HhCHHHHHH
Confidence 99999999999999999999998888889999888775321 0 0001233445555666555 455777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccccccccchhhHHHHHHHHHHH-HHHhcccchhHhhHhhhCCCC
Q 011580 194 LSIVAAVMSFTYSTIGLGLGIAKVAETGKFRGSLTGISIGTVSETQKIWRSFQALGDI-AFAYSYSIILIEIQDTVKSPP 272 (482)
Q Consensus 194 ~s~~~~~~~~~~~~i~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~faf~~~~~i~~i~~~m~~p~ 272 (482)
+..+.....+...+...+..+.+ ....-.+.. .. .+....+.+..++..+ .+.-....+.++..+.+|+++
T Consensus 167 ~~~~~~p~~~i~~i~~~~~~l~~---~g~~~~~~~--~~---~~~~~~~~f~~ai~~~~~~~~~~~~~~~DysRy~~~~~ 238 (501)
T 2jln_A 167 MNVFASPVLLAMGVYMVYLMLDG---ADVSLGEVM--SM---GGENPGMPFSTAIMIFVGGWIAVVVSIHDIVKECKVDP 238 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---HTCCHHHHT--TC---CCSSCCSCHHHHHHHHHTTTHHHHTTTHHHHTTBCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh---cCCcchhhh--cc---CCccchHHHHHHHHHHHHHHHHHHhccCcccccCCCCc
Confidence 77766655544332222222221 110000000 00 0001122333333332 222234467889999998885
Q ss_pred c-cccc-------hhhHHHHHHHHHHHHHHHHHhHHhhhcC
Q 011580 273 S-ESKT-------MKKASLISVGVTTLFYMLCGCFGYAAFG 305 (482)
Q Consensus 273 ~-~~~~-------~~~~~~~s~~~~~i~Y~~~g~~gy~~fG 305 (482)
+ .+|+ ......++..+...+..++|.......+
T Consensus 239 ~~~~~~~~~~~~~~~~g~~lG~~i~~~~~~~lG~~~~~~~~ 279 (501)
T 2jln_A 239 NASREGQTKADARYATAQWLGMVPASIIFGFIGAASMVLVG 279 (501)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cccccchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2 1111 2233334455555555556654433333
No 5
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=98.07 E-value=0.0073 Score=62.13 Aligned_cols=152 Identities=11% Similarity=0.148 Sum_probs=86.3
Q ss_pred cccchHHHHHHHHHhhhhhhhh-hHHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHchhcCCCCCCcccccHHHHHHh
Q 011580 35 KRTGTLWTASAHIITAVIGSGV-LSLAWATAQLGWIAGPSVMFLFSFVTYYTSTLLAACYRSGDPVTGKRNYTYVDAVRS 113 (482)
Q Consensus 35 ~~~~s~~~a~~~l~~~~iG~Gi-LslP~af~~~G~~~gii~~~~~~~~~~~t~~~l~~~~~~~~~~~g~~~~~y~~l~~~ 113 (482)
.|+.+++...+.+..+.+++.. +++|-...+.|+........ .++.-...+..+..-.++. + ..|..|.-++
T Consensus 19 GR~l~~~~~~~s~~at~~Sa~~~lG~~g~~y~~G~~~~~~~~~-~~~~~~i~~~~~~p~~~~~----~--~~T~~e~l~~ 91 (530)
T 3dh4_A 19 GKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWM-SAITLIIVGKYFLPIFIEK----G--IYTIPEFVEK 91 (530)
T ss_dssp CSCCCHHHHHHHHHHHHCSHHHHTHHHHHHHHTCGGGHHHHHH-HHHHHHHHHHHTHHHHHHT----T--CCSHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH-HHHHHHHHHHHHHHHHHHc----C--CccHHHHHHH
Confidence 4667888888899888887765 78999888888764321111 1111112223333323322 1 3599999999
Q ss_pred hhcCcceeehHHHHHH-HHHHHHHHHHHHhhhhhHHhhhhccccCCCCCCCCccCCCchhHHHHHHHHHhhcCCCcchhH
Q 011580 114 NLGGFQVKICGLVQYL-NLFGVAIGYTIASSISMMAIERSNCFHSKGDKNPCHMNSNPYMIAFGIVEIVLSQIPDFDQLW 192 (482)
Q Consensus 114 ~~G~~~~~i~~~~~~~-~~~g~~~~y~i~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~pl~~~~~l~~l~ 192 (482)
-||++.+.+..+...+ ..+..+.+-+...+..++.+++ ++....+++.++++........++...
T Consensus 92 Rfg~~~~~~~a~~~l~~~~~~~~~~~l~~~~~~~~~~~G--------------i~~~~~i~i~~~i~~~Yt~~GGl~aV~ 157 (530)
T 3dh4_A 92 RFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILG--------------IPLMYSILGLALFALVYSIYGGLSAVV 157 (530)
T ss_dssp HTCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--------------CCHHHHHHHHHHHHHHTTC------CC
T ss_pred HcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------------CCHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 9999887766654432 2222233333334555555543 222333455666666777888899999
Q ss_pred HHHHHHHHHHHHHHH
Q 011580 193 WLSIVAAVMSFTYST 207 (482)
Q Consensus 193 ~~s~~~~~~~~~~~~ 207 (482)
+...+..+..+...+
T Consensus 158 ~TD~iQ~~im~~g~~ 172 (530)
T 3dh4_A 158 WTDVIQVFFLVLGGF 172 (530)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 988888877665333
No 6
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A
Probab=97.51 E-value=0.091 Score=54.71 Aligned_cols=152 Identities=11% Similarity=0.148 Sum_probs=84.8
Q ss_pred cccchHHHHHHHHHhhhhhhhh-hHHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHchhcCCCCCCcccccHHHHHHh
Q 011580 35 KRTGTLWTASAHIITAVIGSGV-LSLAWATAQLGWIAGPSVMFLFSFVTYYTSTLLAACYRSGDPVTGKRNYTYVDAVRS 113 (482)
Q Consensus 35 ~~~~s~~~a~~~l~~~~iG~Gi-LslP~af~~~G~~~gii~~~~~~~~~~~t~~~l~~~~~~~~~~~g~~~~~y~~l~~~ 113 (482)
.|+.+++.....+..+.+++.. ++.|-...+.|+........ .++.....+..+..-.++. + ..|..|.-++
T Consensus 48 GR~l~~~~~~~Sl~at~~sa~t~lG~~g~~y~~G~~~~~~~~~-~~~~~~~~~~~~~p~~~r~----~--~~T~~e~l~~ 120 (593)
T 2xq2_A 48 GKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWM-SAITLIIVGKYFLPIFIEK----G--IYTIPEFVEK 120 (593)
T ss_dssp ---CCHHHHHHHHHGGGSSHHHHHHHHHHHHHTCGGGGHHHHH-HHHHHHHHHHTHHHHHHHT----T--CCSHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcHHHHhhHhHHHHHcCHHHHHHHHH-HHHHHHHHHHHHHHHHHhC----C--CCCcHHHHHH
Confidence 4667888888888877777766 68898888888753221111 1111111222233323321 2 3599999999
Q ss_pred hhcCcceeehHHHHHH-HHHHHHHHHHHHhhhhhHHhhhhccccCCCCCCCCccCCCchhHHHHHHHHHhhcCCCcchhH
Q 011580 114 NLGGFQVKICGLVQYL-NLFGVAIGYTIASSISMMAIERSNCFHSKGDKNPCHMNSNPYMIAFGIVEIVLSQIPDFDQLW 192 (482)
Q Consensus 114 ~~G~~~~~i~~~~~~~-~~~g~~~~y~i~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~pl~~~~~l~~l~ 192 (482)
-||++.+.+..+...+ ..+......+...+..++.+++ ++.....++.++++......-.++...
T Consensus 121 Rfg~~~~~~~ai~~l~~~~~~~~~~~l~~~~~~l~~~~G--------------i~~~~~i~i~~~i~~~Yt~~GGl~av~ 186 (593)
T 2xq2_A 121 RFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILG--------------IPLMYSILGLALFALVYSIYGGLSAVV 186 (593)
T ss_dssp HTCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHHHHTTC---CC
T ss_pred HccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------------ccHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 8998877666554332 2222233333345566666553 122333445666666777888888888
Q ss_pred HHHHHHHHHHHHHHH
Q 011580 193 WLSIVAAVMSFTYST 207 (482)
Q Consensus 193 ~~s~~~~~~~~~~~~ 207 (482)
+...+..+..+...+
T Consensus 187 ~TD~iQ~iiml~~~l 201 (593)
T 2xq2_A 187 WTDVIQVFFLVLGGF 201 (593)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 888887776655433
No 7
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=41.09 E-value=2.5e+02 Score=26.89 Aligned_cols=48 Identities=21% Similarity=0.238 Sum_probs=41.9
Q ss_pred ccHHHHHHhhhcCcceeehHHHHHHHHHHHHHHHHHHhhhhhHHhhhh
Q 011580 105 YTYVDAVRSNLGGFQVKICGLVQYLNLFGVAIGYTIASSISMMAIERS 152 (482)
Q Consensus 105 ~~y~~l~~~~~G~~~~~i~~~~~~~~~~g~~~~y~i~~~~~l~~i~~~ 152 (482)
....+..+..+|+++..++.+...+..+++..++....++.+..+...
T Consensus 260 ~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~~~a~d 307 (445)
T 3l1l_A 260 SPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADD 307 (445)
T ss_dssp CTHHHHHHHHHCTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 378899999999999999999999999999999999999888776653
No 8
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=27.30 E-value=2.2e+02 Score=27.24 Aligned_cols=47 Identities=6% Similarity=0.097 Sum_probs=38.6
Q ss_pred cHHHHHHhhhcCcceeehHHHHHHHHHHHHHHHHHHhhhhhHHhhhh
Q 011580 106 TYVDAVRSNLGGFQVKICGLVQYLNLFGVAIGYTIASSISMMAIERS 152 (482)
Q Consensus 106 ~y~~l~~~~~G~~~~~i~~~~~~~~~~g~~~~y~i~~~~~l~~i~~~ 152 (482)
...+..+..+|+++..++.+...+..+++..+.+...++.+..+...
T Consensus 259 ~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~sR~l~a~a~d 305 (444)
T 3gia_A 259 ALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKD 305 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHH
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 56777888888888888888888888899888888888888777754
No 9
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=25.33 E-value=5.2e+02 Score=25.77 Aligned_cols=30 Identities=20% Similarity=0.178 Sum_probs=25.3
Q ss_pred hHHHHHHHHHhhhhhhh-hhHHHHHHHhhCh
Q 011580 39 TLWTASAHIITAVIGSG-VLSLAWATAQLGW 68 (482)
Q Consensus 39 s~~~a~~~l~~~~iG~G-iLslP~af~~~G~ 68 (482)
|-.+-+...+++.+|-| +.=.||-..+-|-
T Consensus 10 sr~~FiLa~~G~AVGLGNiWRFPyl~~~nGG 40 (519)
T 2a65_A 10 TRLGLILAMAGNAVGLGNFLRFPVQAAENGG 40 (519)
T ss_dssp CHHHHHHHHHHHHSSHHHHTHHHHHHHHTTT
T ss_pred cHHHHHHHHHHHHhcccHHHHHHHHHHHcCC
Confidence 55677888899999999 6889999988874
No 10
>4ain_A Glycine betaine transporter BETP; membrane protein, chemosensor and osmosensor, secondary TRAN sodium coupled transport; HET: FLC CM5; 3.10A {Corynebacterium glutamicum} PDB: 4doj_A* 2w8a_A 2wit_A 3p03_A
Probab=20.17 E-value=6.6e+02 Score=25.13 Aligned_cols=103 Identities=12% Similarity=0.005 Sum_probs=51.3
Q ss_pred cccchHHHHHHHHHhhhhhhhhhH----HHHHHHhh---C-----hhhHHHHHHHHHHHHHHHHHHHHHch------hcC
Q 011580 35 KRTGTLWTASAHIITAVIGSGVLS----LAWATAQL---G-----WIAGPSVMFLFSFVTYYTSTLLAACY------RSG 96 (482)
Q Consensus 35 ~~~~s~~~a~~~l~~~~iG~GiLs----lP~af~~~---G-----~~~gii~~~~~~~~~~~t~~~l~~~~------~~~ 96 (482)
|+.-|.++-+..++.+-+|.|++. =|....+. | .-.+....++=+.+..|+.+.++-.. ++.
T Consensus 93 kPefS~~sW~aMlF~AGmGiGl~FwgvaEPl~h~~~pP~~~~~eAa~~Am~~t~fHWG~~~WAiYav~glalaY~~yrk~ 172 (539)
T 4ain_A 93 APEFRTVSWISMMFAAGMGIGLMFYGTTEPLTFYRNGVPGHDEHNVGVAMSTTMFHWTLHPWAIYAIVGLAIAYSTFRVG 172 (539)
T ss_dssp CCSSCHHHHHHHHHTTSCCTHHHHHHHHHHHHHHHTCCTTSCSSCHHHHHHHHHHHHSHHHHHHHHHHHHHHHCCCCCTC
T ss_pred CCCCcchHHHHHHHHHhhcchheeehhhhhHHHhcCCCCCccHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhcCC
Confidence 344478888899999999999984 33333221 1 11233334444444455555444311 221
Q ss_pred CCCCCcccccHHHHHHh-hhcCcceeehHHH-HHHHHHHHHHHHH
Q 011580 97 DPVTGKRNYTYVDAVRS-NLGGFQVKICGLV-QYLNLFGVAIGYT 139 (482)
Q Consensus 97 ~~~~g~~~~~y~~l~~~-~~G~~~~~i~~~~-~~~~~~g~~~~y~ 139 (482)
.|. ..|..=|+=++++ .-|+.+ .++|+. ++...+|...+.-
T Consensus 173 ~pl-~iss~l~PllG~r~~~G~~G-~~IDilav~atv~GvatSLG 215 (539)
T 4ain_A 173 RKQ-LLSSAFVPLIGEKGAEGWLG-KLIDILAIIATVFGTACSLG 215 (539)
T ss_dssp CCS-CTTGGGHHHHHHHHTTSHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-cHHHHhHhhcCCCccCCcch-hhhHHHHHHHHHHHHhhhHH
Confidence 111 1111225555655 555544 456654 4455555555443
Done!