Query 011584
Match_columns 482
No_of_seqs 414 out of 2250
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 02:59:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011584.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011584hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4188 Uncharacterized conser 100.0 7.8E-38 1.7E-42 278.2 7.1 156 315-482 2-159 (159)
2 PF12572 DUF3752: Protein of u 100.0 7.7E-32 1.7E-36 248.3 9.7 135 333-474 12-152 (152)
3 COG0484 DnaJ DnaJ-class molecu 99.9 4.1E-22 9E-27 205.4 6.0 94 203-296 3-100 (371)
4 KOG0713 Molecular chaperone (D 99.8 6.7E-21 1.4E-25 192.5 7.2 73 203-275 15-88 (336)
5 KOG0712 Molecular chaperone (D 99.7 1.9E-18 4.1E-23 176.3 6.4 86 203-296 3-88 (337)
6 PRK14288 chaperone protein Dna 99.7 4.6E-18 1E-22 177.2 7.5 70 203-272 2-72 (369)
7 PRK14296 chaperone protein Dna 99.7 5.2E-18 1.1E-22 177.0 7.5 70 203-272 3-72 (372)
8 KOG0691 Molecular chaperone (D 99.7 4E-17 8.6E-22 164.8 8.1 94 203-302 4-98 (296)
9 PTZ00037 DnaJ_C chaperone prot 99.7 2.5E-17 5.4E-22 174.3 6.7 86 203-296 27-112 (421)
10 PRK14279 chaperone protein Dna 99.7 4.4E-17 9.5E-22 171.1 7.5 68 203-270 8-76 (392)
11 PRK14286 chaperone protein Dna 99.7 5.8E-17 1.3E-21 169.2 7.9 70 203-272 3-73 (372)
12 PRK14287 chaperone protein Dna 99.7 5.6E-17 1.2E-21 169.2 7.6 70 203-272 3-72 (371)
13 PRK14283 chaperone protein Dna 99.7 7.4E-17 1.6E-21 168.7 7.4 70 203-272 4-73 (378)
14 PF00226 DnaJ: DnaJ domain; I 99.7 1.1E-16 2.3E-21 125.9 6.2 62 205-266 1-64 (64)
15 PRK14276 chaperone protein Dna 99.7 7.9E-17 1.7E-21 168.6 7.0 70 203-272 3-72 (380)
16 PRK14299 chaperone protein Dna 99.7 1.4E-16 3E-21 161.2 7.6 70 203-272 3-72 (291)
17 PRK14291 chaperone protein Dna 99.6 1.3E-16 2.9E-21 167.0 7.2 70 203-272 2-71 (382)
18 PRK14298 chaperone protein Dna 99.6 1.2E-16 2.5E-21 167.2 6.6 70 203-272 4-73 (377)
19 PRK14280 chaperone protein Dna 99.6 1.6E-16 3.5E-21 166.1 7.2 70 203-272 3-72 (376)
20 PRK14282 chaperone protein Dna 99.6 1.8E-16 3.9E-21 165.3 7.4 70 203-272 3-74 (369)
21 PRK14278 chaperone protein Dna 99.6 1.7E-16 3.7E-21 166.0 7.1 68 204-271 3-70 (378)
22 PRK14294 chaperone protein Dna 99.6 2.8E-16 6.1E-21 163.7 7.8 70 203-272 3-73 (366)
23 PRK14277 chaperone protein Dna 99.6 2.9E-16 6.4E-21 164.6 7.7 70 203-272 4-74 (386)
24 PRK14285 chaperone protein Dna 99.6 2.8E-16 6.1E-21 163.6 7.2 70 203-272 2-72 (365)
25 PRK14297 chaperone protein Dna 99.6 3.7E-16 8E-21 163.5 6.5 70 203-272 3-73 (380)
26 PRK14284 chaperone protein Dna 99.6 4.9E-16 1.1E-20 163.2 7.3 69 204-272 1-70 (391)
27 PRK14295 chaperone protein Dna 99.6 5.4E-16 1.2E-20 162.8 7.3 69 203-271 8-81 (389)
28 PRK14301 chaperone protein Dna 99.6 5.1E-16 1.1E-20 162.2 6.7 70 203-272 3-73 (373)
29 KOG0716 Molecular chaperone (D 99.6 7.3E-16 1.6E-20 151.9 7.4 73 203-275 30-103 (279)
30 KOG0718 Molecular chaperone (D 99.6 3.8E-16 8.3E-21 162.8 5.3 73 203-275 8-84 (546)
31 KOG0719 Molecular chaperone (D 99.6 9.5E-16 2.1E-20 148.2 6.9 89 203-296 13-104 (264)
32 PRK10767 chaperone protein Dna 99.6 9.2E-16 2E-20 160.0 7.4 70 203-272 3-73 (371)
33 PRK14281 chaperone protein Dna 99.6 8.8E-16 1.9E-20 161.6 7.3 70 204-273 3-73 (397)
34 PTZ00341 Ring-infected erythro 99.6 9.5E-16 2.1E-20 171.6 7.3 74 202-275 571-644 (1136)
35 KOG0717 Molecular chaperone (D 99.6 1.1E-15 2.3E-20 159.4 6.6 70 203-272 7-78 (508)
36 TIGR02349 DnaJ_bact chaperone 99.6 1.2E-15 2.7E-20 158.0 6.8 69 205-273 1-69 (354)
37 PRK10266 curved DNA-binding pr 99.6 1.7E-15 3.8E-20 154.2 7.5 68 203-270 3-70 (306)
38 PRK14300 chaperone protein Dna 99.6 1.3E-15 2.8E-20 159.0 6.7 69 204-272 3-71 (372)
39 KOG0715 Molecular chaperone (D 99.6 2.1E-15 4.5E-20 152.6 7.2 70 203-272 42-111 (288)
40 PRK14293 chaperone protein Dna 99.6 1.9E-15 4.1E-20 157.9 7.0 70 203-272 2-71 (374)
41 PRK14292 chaperone protein Dna 99.6 1.8E-15 3.9E-20 157.8 6.6 69 204-272 2-70 (371)
42 PRK14289 chaperone protein Dna 99.6 3.1E-15 6.6E-20 156.9 7.7 70 203-272 4-74 (386)
43 PRK14290 chaperone protein Dna 99.6 3E-15 6.4E-20 156.0 6.7 69 204-272 3-73 (365)
44 smart00271 DnaJ DnaJ molecular 99.5 1.1E-14 2.3E-19 112.7 6.2 57 204-260 1-59 (60)
45 KOG0720 Molecular chaperone (D 99.5 2.8E-14 6.1E-19 149.0 10.0 82 192-275 225-306 (490)
46 cd06257 DnaJ DnaJ domain or J- 99.5 2.4E-14 5.2E-19 108.7 6.5 54 205-258 1-55 (55)
47 TIGR03835 termin_org_DnaJ term 99.5 4.9E-14 1.1E-18 155.0 8.6 70 204-273 2-71 (871)
48 COG2214 CbpA DnaJ-class molecu 99.4 1.2E-13 2.6E-18 129.1 6.8 67 203-269 5-73 (237)
49 KOG0721 Molecular chaperone (D 99.4 1.7E-13 3.6E-18 131.6 6.9 71 203-273 98-169 (230)
50 PHA03102 Small T antigen; Revi 99.4 7.1E-14 1.5E-18 129.1 4.0 67 205-274 6-74 (153)
51 PRK05014 hscB co-chaperone Hsc 99.3 2.7E-12 5.8E-17 120.9 7.5 67 204-270 1-75 (171)
52 PRK01356 hscB co-chaperone Hsc 99.3 3.5E-12 7.5E-17 119.6 7.8 67 204-270 2-74 (166)
53 PRK00294 hscB co-chaperone Hsc 99.3 6.7E-12 1.5E-16 118.4 8.2 69 202-270 2-78 (173)
54 KOG0722 Molecular chaperone (D 99.3 3.5E-12 7.6E-17 124.9 5.5 77 199-275 28-104 (329)
55 KOG0624 dsRNA-activated protei 99.3 6.7E-12 1.5E-16 128.0 6.8 77 192-268 381-462 (504)
56 PRK03578 hscB co-chaperone Hsc 99.2 1.6E-11 3.4E-16 116.3 7.8 68 203-270 5-80 (176)
57 PRK09430 djlA Dna-J like membr 99.2 1.5E-11 3.2E-16 123.4 6.5 89 170-258 144-262 (267)
58 PHA02624 large T antigen; Prov 99.1 3E-11 6.5E-16 131.9 4.1 97 203-308 10-113 (647)
59 KOG0714 Molecular chaperone (D 99.1 3.3E-11 7.2E-16 118.2 3.7 70 203-272 2-73 (306)
60 KOG1150 Predicted molecular ch 99.1 2.5E-10 5.4E-15 108.6 8.4 84 192-275 37-126 (250)
61 KOG0550 Molecular chaperone (D 99.1 1E-10 2.2E-15 121.6 4.2 71 200-270 369-441 (486)
62 PTZ00100 DnaJ chaperone protei 99.0 2E-10 4.4E-15 101.5 4.4 52 203-257 64-115 (116)
63 PRK01773 hscB co-chaperone Hsc 98.9 2.5E-09 5.5E-14 101.0 7.0 67 204-270 2-76 (173)
64 COG5407 SEC63 Preprotein trans 98.8 3.6E-09 7.9E-14 110.8 6.0 72 202-273 96-173 (610)
65 TIGR00714 hscB Fe-S protein as 98.8 1.3E-08 2.8E-13 94.8 7.0 56 215-270 2-63 (157)
66 COG5269 ZUO1 Ribosome-associat 98.5 4.6E-08 1E-12 97.1 3.6 74 197-270 36-115 (379)
67 KOG1789 Endocytosis protein RM 98.2 2.6E-06 5.7E-11 96.6 7.7 100 203-306 1280-1393(2235)
68 KOG0568 Molecular chaperone (D 97.9 1.5E-05 3.3E-10 77.9 4.8 54 204-257 47-101 (342)
69 KOG0723 Molecular chaperone (D 97.1 0.00064 1.4E-08 59.3 4.8 49 208-259 60-108 (112)
70 COG1076 DjlA DnaJ-domain-conta 96.8 0.0011 2.4E-08 62.7 3.7 87 170-256 77-173 (174)
71 KOG3192 Mitochondrial J-type c 96.6 0.0025 5.4E-08 59.3 4.4 68 203-270 7-82 (168)
72 KOG0431 Auxilin-like protein a 95.5 0.013 2.8E-07 63.5 4.3 44 212-255 396-447 (453)
73 COG1076 DjlA DnaJ-domain-conta 94.4 0.031 6.7E-07 52.9 3.0 69 205-273 2-78 (174)
74 PF03656 Pam16: Pam16; InterP 89.0 0.63 1.4E-05 42.3 4.7 50 206-258 60-109 (127)
75 PRK05339 PEP synthetase regula 75.9 9.1 0.0002 39.1 7.3 70 2-86 17-98 (269)
76 PF03618 Kinase-PPPase: Kinase 71.9 13 0.00029 37.6 7.3 71 2-87 11-93 (255)
77 KOG0724 Zuotin and related mol 70.6 4.6 9.9E-05 41.8 3.8 54 216-269 4-62 (335)
78 PF13446 RPT: A repeated domai 57.7 17 0.00036 28.4 3.9 26 205-230 6-31 (62)
79 PRK02363 DNA-directed RNA poly 48.1 35 0.00075 31.2 4.9 64 1-70 3-70 (129)
80 COG5552 Uncharacterized conser 42.3 80 0.0017 26.4 5.6 46 203-248 2-47 (88)
81 PF11833 DUF3353: Protein of u 39.2 53 0.0012 31.9 5.0 38 213-257 1-38 (194)
82 PF14687 DUF4460: Domain of un 36.0 76 0.0016 28.2 5.0 25 214-238 4-28 (112)
83 PF10041 DUF2277: Uncharacteri 31.1 1.3E+02 0.0027 25.3 5.1 45 203-247 2-46 (78)
84 PF12626 PolyA_pol_arg_C: Poly 20.7 1.3E+02 0.0029 27.1 3.9 52 250-307 52-103 (124)
No 1
>KOG4188 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=7.8e-38 Score=278.21 Aligned_cols=156 Identities=49% Similarity=0.810 Sum_probs=133.6
Q ss_pred CCcccccccCCCCCCCCCCCCCCcccccccCCCCCCCCCCCCCCChHHHHHHHHhhhhhhhhhhhcccchHHHhhhchhH
Q 011584 315 PKRDEWMTTLPPERKPGGGVPMHSTKTFSRTSKEGRGDTSVWTDTPSDRAQKAKMNYLEAYSETSALASTEEEKKGARAD 394 (482)
Q Consensus 315 ~~reeWM~~lPp~~~~~~g~~~~~~R~F~~~~~~~~gd~S~WTeTP~ek~kR~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 394 (482)
|+|++|||.|||.+..+ |++.+ +|+|.+....++||+|+||+||.+|.+|+++.++..++..++..+.+.+.-+..++
T Consensus 2 pkReeWMt~lP~e~~~~-gl~~~-~rTFkrga~~~sgd~ssWtdtP~dke~rak~t~~ars~sskale~~~~~~~~~~rd 79 (159)
T KOG4188|consen 2 PKREEWMTTLPPERKVF-GLGQQ-SRTFKRGAREGSGDRSSWTDTPMDKERRAKETYLARSNSSKALESNEGENMKRSRD 79 (159)
T ss_pred chHHHHHHhCCchhccc-ccccc-chhhhcccccCCCcccccccCcccHHHHHHhhhhhhhhhhHHHHHhhhhhhhhhhh
Confidence 58999999999999987 77765 89999999889999999999999999999999888877766665555555566789
Q ss_pred HHHHHHHHhhccCcchHHHhHHhhhhhhhhccCCCcccccccCCCCCCCCchhhhhhcCccc--ccccHHHHhcccCCCC
Q 011584 395 ADLVDKYNKEKRSKSLVQKHQEEGKTRAKKKSKQQPEKEEWVGEHPWKPWDREKDLVAGRQN--IKFDSENMAEGLSSRF 472 (482)
Q Consensus 395 ~~~v~~yn~~~R~~SLle~Hq~k~k~~~k~~s~~~~~ke~~~ed~p~RpFDRekDl~~~~~~--~~~~~~~kA~~l~sRF 472 (482)
+++|+.||+++|++||||+||++++.+.+ .+|...++|||||||+||.|+++. ...+.+.+|+.|++||
T Consensus 80 aeqvs~~nkkkr~eSLvEiHqkk~~sK~k---------d~~~~q~errPfdRekDlkv~r~d~n~kk~avdkak~latkF 150 (159)
T KOG4188|consen 80 AEQVSKYNKKKRAESLVEIHQKKLSSKEK---------DEWKPQHERRPFDREKDLKVNRQDPNQKKDAVDKAKELATKF 150 (159)
T ss_pred HHHHHHHHhhhcchHHHHHHHHHHhHHHH---------hcccCcccCCCccccccccccccCcchhHHHHHHHHHHHHHh
Confidence 99999999999999999999999987532 234456789999999999999984 4555679999999999
Q ss_pred CCCcccCCCC
Q 011584 473 SSGNFQRNFL 482 (482)
Q Consensus 473 s~G~~~r~FL 482 (482)
|+|+|| .||
T Consensus 151 s~gk~q-rfl 159 (159)
T KOG4188|consen 151 SSGKFQ-RFL 159 (159)
T ss_pred ccCccc-ccC
Confidence 999999 565
No 2
>PF12572 DUF3752: Protein of unknown function (DUF3752); InterPro: IPR022226 This domain family is found in eukaryotes, and is typically between 140 and 163 amino acids in length.
Probab=99.97 E-value=7.7e-32 Score=248.32 Aligned_cols=135 Identities=36% Similarity=0.539 Sum_probs=108.4
Q ss_pred CCCCCcccccccCCCCCCCCCCCCCCChHHHHHHHHhhhhhhhhhhhcccc---hHHHhhhchhHHHHHHHHHhhccCcc
Q 011584 333 GVPMHSTKTFSRTSKEGRGDTSVWTDTPSDRAQKAKMNYLEAYSETSALAS---TEEEKKGARADADLVDKYNKEKRSKS 409 (482)
Q Consensus 333 g~~~~~~R~F~~~~~~~~gd~S~WTeTP~ek~kR~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~v~~yn~~~R~~S 409 (482)
+++++++|+|+++...+.+|+|+|||||+||++|++++++|.......... ......+..+++++|++||+++|++|
T Consensus 12 dptkl~~R~F~~~~~~~~~d~S~WTeTP~ek~~Rl~~~~~g~~~~~~~~~~~~~~~~~~~~~~e~~~~v~~yn~k~R~~S 91 (152)
T PF12572_consen 12 DPTKLKNRKFSKGTKSARGDRSSWTETPEEKAKRLADEVLGRSSRASASADEAEAEKRSKRDKEMAEQVKEYNEKKRGES 91 (152)
T ss_pred CcccccCCccccCCCCCCCCccccccCHHHHHHhhhhcccccccccccccccchhhhhhhccHHHHHHHHHHHHHhcchh
Confidence 667788999999987777899999999999999999999988755432211 11223344567789999999999999
Q ss_pred hHHHhHHhhhhhhhhccCCCcccccccCCCCCCCCchhhhhhcCcc-cc--cccHHHHhcccCCCCCC
Q 011584 410 LVQKHQEEGKTRAKKKSKQQPEKEEWVGEHPWKPWDREKDLVAGRQ-NI--KFDSENMAEGLSSRFSS 474 (482)
Q Consensus 410 Lle~Hq~k~k~~~k~~s~~~~~ke~~~ed~p~RpFDRekDl~~~~~-~~--~~~~~~kA~~l~sRFs~ 474 (482)
||++||++++++++. +++++++++|||||||+||.++++ +. +..++++|++|||||+|
T Consensus 92 L~e~Hq~k~k~~~~~-------~~~~~~~~~rR~FDRekDm~~~~~~~~~qr~~li~ka~~l~sRFs~ 152 (152)
T PF12572_consen 92 LLEMHQKKRKKKKKE-------KEEEEDDPSRRPFDREKDMAVGGRIDNAQRKELIKKAKDLGSRFSS 152 (152)
T ss_pred HHHHHHHHHHhhccc-------ccccCCCCCCCCCChhhhccccccCCHHHHHHHHHHHHhccccccC
Confidence 999999999886552 233456778899999999999998 54 34468999999999996
No 3
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.85 E-value=4.1e-22 Score=205.39 Aligned_cols=94 Identities=31% Similarity=0.462 Sum_probs=79.6
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHHHHHHHHH-
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEEQEKFKV- 280 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~~~~~~~- 280 (482)
.+|||+||||+++||.+|||+|||+||++||||+|+ .+.|+++|+.|++||+|||||++|+.||+++..+.....+.-
T Consensus 3 ~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~gg~ 82 (371)
T COG0484 3 KRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFGGF 82 (371)
T ss_pred ccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcCCC
Confidence 689999999999999999999999999999999999 889999999999999999999999999999988875322111
Q ss_pred HHhhh--hhhhhhhhhhc
Q 011584 281 ELKAM--QEGAQWRKSQG 296 (482)
Q Consensus 281 e~~~~--~~~~~wr~~fG 296 (482)
.+..+ +..++|..|||
T Consensus 83 g~~~fgg~~~DIF~~~Fg 100 (371)
T COG0484 83 GFGGFGGDFGDIFEDFFG 100 (371)
T ss_pred CcCCCCCCHHHHHHHhhc
Confidence 11111 25778888885
No 4
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=6.7e-21 Score=192.50 Aligned_cols=73 Identities=41% Similarity=0.627 Sum_probs=69.9
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHHHH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEEQ 275 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~~ 275 (482)
.+|||+||||+++|+..+||+||||||++||||||+ +|.|.+.|+.|+.||+|||||++|+.||.+|..+...
T Consensus 15 ~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~ 88 (336)
T KOG0713|consen 15 GRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKD 88 (336)
T ss_pred CCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcc
Confidence 799999999999999999999999999999999999 6899999999999999999999999999999877664
No 5
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=1.9e-18 Score=176.34 Aligned_cols=86 Identities=33% Similarity=0.435 Sum_probs=73.4
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHHHHHHHHHHH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEEQEKFKVEL 282 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~~~~~~~e~ 282 (482)
...||+||||+++||.+|||+|||+|+++||||||++ +.++|+.|++||+|||||++|..||+++..+.....+.-.
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~--~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~~g- 79 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD--AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGGGG- 79 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc--HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCCCC-
Confidence 5789999999999999999999999999999999976 8899999999999999999999999999877654332211
Q ss_pred hhhhhhhhhhhhhc
Q 011584 283 KAMQEGAQWRKSQG 296 (482)
Q Consensus 283 ~~~~~~~~wr~~fG 296 (482)
...|..||+
T Consensus 80 -----~~~f~~~F~ 88 (337)
T KOG0712|consen 80 -----FGGFSQFFG 88 (337)
T ss_pred -----CccHHHhcc
Confidence 112777776
No 6
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.72 E-value=4.6e-18 Score=177.22 Aligned_cols=70 Identities=31% Similarity=0.443 Sum_probs=65.9
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++||.++||+|||+||++||||+|+ ++.|+++|+.|++||+||+||.+|+.||+++..+
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~ 72 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKG 72 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccc
Confidence 479999999999999999999999999999999998 5679999999999999999999999999998654
No 7
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.72 E-value=5.2e-18 Score=177.02 Aligned_cols=70 Identities=31% Similarity=0.477 Sum_probs=66.8
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+.++||+|||+||++||||+|+.+.|+++|+.|++||+|||||.+|+.||+++..+
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~ 72 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAA 72 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccchh
Confidence 4799999999999999999999999999999999988889999999999999999999999999998654
No 8
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.69 E-value=4e-17 Score=164.79 Aligned_cols=94 Identities=32% Similarity=0.446 Sum_probs=81.4
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHHHHHHHHHH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEEQEKFKVE 281 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~~~~~~~e 281 (482)
..|||+||||+.+++..+|++|||+.++.||||||+ +|.|.+.|+.|.+||+||+|+.+|..||.++..+.....+
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~~~--- 80 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQGR--- 80 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccchhh---
Confidence 579999999999999999999999999999999999 7889999999999999999999999999999888766432
Q ss_pred HhhhhhhhhhhhhhcCCCCCc
Q 011584 282 LKAMQEGAQWRKSQGILMEGD 302 (482)
Q Consensus 282 ~~~~~~~~~wr~~fG~~~~gD 302 (482)
.++.+.|+..||..++.+
T Consensus 81 ---~d~~~~~r~~f~~dl~~~ 98 (296)
T KOG0691|consen 81 ---EDQADGFRKKFGSDLFER 98 (296)
T ss_pred ---hhHHHHHHHHhhhhhhhh
Confidence 345577777777554433
No 9
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.68 E-value=2.5e-17 Score=174.25 Aligned_cols=86 Identities=29% Similarity=0.424 Sum_probs=70.9
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHHHHHHHHHHH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEEQEKFKVEL 282 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~~~~~~~e~ 282 (482)
..|||+||||+++||.++||+|||+||++||||+|++ .++|+.|++||+||+||.+|+.||.++..+.... .
T Consensus 27 ~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~---~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~-----~ 98 (421)
T PTZ00037 27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD---PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGG-----E 98 (421)
T ss_pred chhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch---HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccC-----C
Confidence 5799999999999999999999999999999999853 5899999999999999999999999987543211 0
Q ss_pred hhhhhhhhhhhhhc
Q 011584 283 KAMQEGAQWRKSQG 296 (482)
Q Consensus 283 ~~~~~~~~wr~~fG 296 (482)
...++.+.|..|||
T Consensus 99 ~~~d~~d~f~~~Fg 112 (421)
T PTZ00037 99 QPADASDLFDLIFG 112 (421)
T ss_pred CCcchhhhHHHhhc
Confidence 11234466777765
No 10
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.68 E-value=4.4e-17 Score=171.15 Aligned_cols=68 Identities=40% Similarity=0.593 Sum_probs=64.8
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (482)
..|||+||||+++|+.++||+|||+|+++||||+|+ .+.|.++|+.|++||+|||||++|+.||+++.
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~ 76 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRR 76 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence 479999999999999999999999999999999998 56799999999999999999999999999975
No 11
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.67 E-value=5.8e-17 Score=169.17 Aligned_cols=70 Identities=33% Similarity=0.546 Sum_probs=66.0
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+.++||+|||+|+++||||+|+ .+.|+++|+.|++||+||+||.+|+.||+++..+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g 73 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAG 73 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchh
Confidence 479999999999999999999999999999999998 4679999999999999999999999999998754
No 12
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.67 E-value=5.6e-17 Score=169.24 Aligned_cols=70 Identities=31% Similarity=0.518 Sum_probs=66.6
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+.++||+|||+|+++||||+|+.+.++++|+.|++||++|+||.+|+.||+++..+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~ 72 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTD 72 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcc
Confidence 4799999999999999999999999999999999988889999999999999999999999999998654
No 13
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.67 E-value=7.4e-17 Score=168.68 Aligned_cols=70 Identities=31% Similarity=0.451 Sum_probs=66.9
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+.++||+|||+|+++||||+|+++.|+++|+.|++||++|+|+.+|+.||+++..+
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g 73 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAG 73 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhcccc
Confidence 6799999999999999999999999999999999988889999999999999999999999999988654
No 14
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.66 E-value=1.1e-16 Score=125.91 Aligned_cols=62 Identities=40% Similarity=0.717 Sum_probs=59.6
Q ss_pred CcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChH--HHHHHHHHHHHHHHhcChhHHHHHH
Q 011584 205 CPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQ--AHQAFIKLNKAFKELQDPEKRKALD 266 (482)
Q Consensus 205 d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~--a~e~F~~I~~AY~vLsDp~kR~~YD 266 (482)
|||+||||+++++.++|+++|+++++.+|||++.... +.+.|..|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 5899999999999999999999999999999998755 9999999999999999999999998
No 15
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.66 E-value=7.9e-17 Score=168.57 Aligned_cols=70 Identities=34% Similarity=0.517 Sum_probs=66.7
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+.++||+|||+|+++||||+|+++.|+++|+.|++||+||+||.+|+.||.++..+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~ 72 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAG 72 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCcc
Confidence 4799999999999999999999999999999999998889999999999999999999999999998654
No 16
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.65 E-value=1.4e-16 Score=161.21 Aligned_cols=70 Identities=34% Similarity=0.488 Sum_probs=66.6
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+.++||+|||+|+++||||+|+.+.++++|+.|++||++|+||.+|+.||.++..+
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~ 72 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTA 72 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCcc
Confidence 4799999999999999999999999999999999988889999999999999999999999999988653
No 17
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.65 E-value=1.3e-16 Score=166.95 Aligned_cols=70 Identities=36% Similarity=0.570 Sum_probs=66.7
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+.++||+|||+|+++||||+|+.+.+.++|+.|++||+||+||.+|+.||.++..+
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~ 71 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAA 71 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccc
Confidence 4799999999999999999999999999999999998889999999999999999999999999988654
No 18
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.65 E-value=1.2e-16 Score=167.21 Aligned_cols=70 Identities=34% Similarity=0.534 Sum_probs=66.5
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+.++||+|||+|+++||||+|+.+.++++|+.|++||+||+||.+|+.||+++..+
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g 73 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAG 73 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccc
Confidence 4699999999999999999999999999999999988889999999999999999999999999998654
No 19
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.65 E-value=1.6e-16 Score=166.07 Aligned_cols=70 Identities=31% Similarity=0.432 Sum_probs=66.7
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+.++||+|||+|+++||||+|+.+.|+++|+.|++||+||+||.+|+.||.++..+
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~ 72 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAG 72 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCccc
Confidence 4799999999999999999999999999999999998889999999999999999999999999998654
No 20
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.64 E-value=1.8e-16 Score=165.30 Aligned_cols=70 Identities=31% Similarity=0.523 Sum_probs=65.4
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC--hHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH--PQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~--~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+.++||+|||+|+++||||+|+. ..|++.|+.|++||+||+||.+|+.||.++..+
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~ 74 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVG 74 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccc
Confidence 5799999999999999999999999999999999974 568999999999999999999999999988654
No 21
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.64 E-value=1.7e-16 Score=165.96 Aligned_cols=68 Identities=34% Similarity=0.537 Sum_probs=65.4
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhh
Q 011584 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (482)
Q Consensus 204 ~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (482)
.|||+||||+++|+.++||+|||+|+++||||+|+.+.|+++|+.|++||+||+||.+|+.||.++..
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~ 70 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDP 70 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCCc
Confidence 69999999999999999999999999999999999888999999999999999999999999998764
No 22
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.64 E-value=2.8e-16 Score=163.67 Aligned_cols=70 Identities=33% Similarity=0.535 Sum_probs=66.1
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+.++||+|||+|+++||||+++ .+.+++.|+.|++||+||+||.+|+.||+++..+
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g 73 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEG 73 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhcccc
Confidence 579999999999999999999999999999999998 4678999999999999999999999999998754
No 23
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.63 E-value=2.9e-16 Score=164.61 Aligned_cols=70 Identities=34% Similarity=0.558 Sum_probs=65.8
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+.++||+|||+|+++||||+|+ .+.|+++|+.|++||+||+||.+|+.||.++..+
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~ 74 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAA 74 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccc
Confidence 479999999999999999999999999999999998 4678999999999999999999999999998654
No 24
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.63 E-value=2.8e-16 Score=163.63 Aligned_cols=70 Identities=29% Similarity=0.428 Sum_probs=65.5
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+.++||+|||+|+++||||+|+ .+.|.++|+.|++||+||+|+.+|..||.++..+
T Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~ 72 (365)
T PRK14285 2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTA 72 (365)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcch
Confidence 369999999999999999999999999999999997 4678899999999999999999999999998754
No 25
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.62 E-value=3.7e-16 Score=163.54 Aligned_cols=70 Identities=31% Similarity=0.531 Sum_probs=65.8
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+.++||+|||+|+++||||+|+ .+.|+++|+.|++||+||+||.+|+.||+++..+
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~ 73 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTAD 73 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCccc
Confidence 479999999999999999999999999999999998 4678999999999999999999999999998654
No 26
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.62 E-value=4.9e-16 Score=163.22 Aligned_cols=69 Identities=35% Similarity=0.527 Sum_probs=64.9
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 204 ~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
.|||+||||+++|+.++||+|||+|+++||||+|+ .+.|+++|+.|++||+||+|+.+|+.||+++..+
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g 70 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDG 70 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccc
Confidence 48999999999999999999999999999999998 4679999999999999999999999999998653
No 27
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.62 E-value=5.4e-16 Score=162.79 Aligned_cols=69 Identities=32% Similarity=0.444 Sum_probs=64.3
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHH----Hhhh
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDE----KIKL 271 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~----~~~~ 271 (482)
..|||+||||+++|+.++||+|||+|+++||||+|+ .+.|+++|+.|++||+||+||.+|+.||+ ++..
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~ 81 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNG 81 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccc
Confidence 469999999999999999999999999999999998 45789999999999999999999999998 6643
No 28
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.61 E-value=5.1e-16 Score=162.19 Aligned_cols=70 Identities=37% Similarity=0.576 Sum_probs=65.6
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+.++||+|||+|+++||||+|+ .+.|+++|+.|++||+||+||.+|+.||.++..+
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g 73 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAG 73 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccc
Confidence 479999999999999999999999999999999998 4678899999999999999999999999998654
No 29
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.61 E-value=7.3e-16 Score=151.94 Aligned_cols=73 Identities=38% Similarity=0.535 Sum_probs=68.3
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC-hHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHHHH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH-PQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEEQ 275 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~-~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~~ 275 (482)
..|+|+||||+++|+.++|||+||+|+++||||++++ |.+.++|+.||.||.||+||.+|..||.++..+...
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~l 103 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGLKL 103 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHHH
Confidence 5689999999999999999999999999999999996 889999999999999999999999999998766543
No 30
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.61 E-value=3.8e-16 Score=162.82 Aligned_cols=73 Identities=30% Similarity=0.489 Sum_probs=68.5
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCh----HHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHHHH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHP----QAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEEQ 275 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~----~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~~ 275 (482)
..|||.+|+|+++|+.+||++|||++++.|||||..++ .|++.|+.|.+||+|||||.+|++||.+|..+...
T Consensus 8 e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t 84 (546)
T KOG0718|consen 8 EIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLKT 84 (546)
T ss_pred hhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccccc
Confidence 46899999999999999999999999999999999855 48999999999999999999999999999998774
No 31
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.60 E-value=9.5e-16 Score=148.18 Aligned_cols=89 Identities=31% Similarity=0.486 Sum_probs=77.4
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC---ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHHHHHHHH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP---HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEEQEKFK 279 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~---~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~~~~~~ 279 (482)
..|+|+||||.++|+..+|++||++|+++||||++. ...+.+.|+.|+.||+||+|.++|+.||+.+.........
T Consensus 13 ~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~idd~~~d~- 91 (264)
T KOG0719|consen 13 KKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSIDDESGDI- 91 (264)
T ss_pred ccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCccchh-
Confidence 569999999999999999999999999999999996 3468999999999999999999999999999877443322
Q ss_pred HHHhhhhhhhhhhhhhc
Q 011584 280 VELKAMQEGAQWRKSQG 296 (482)
Q Consensus 280 ~e~~~~~~~~~wr~~fG 296 (482)
..+|...|+.+|.
T Consensus 92 ----~~~~~e~~~~iyk 104 (264)
T KOG0719|consen 92 ----DEDWLEFWRAIYK 104 (264)
T ss_pred ----hhHHHHHHHHHHh
Confidence 3357788888876
No 32
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=9.2e-16 Score=160.02 Aligned_cols=70 Identities=36% Similarity=0.600 Sum_probs=65.6
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+.++||+|||+|+++||||+|+ .+.|.++|+.|++||++|+|+.+|..||.++..+
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 73 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAA 73 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccc
Confidence 479999999999999999999999999999999997 4678999999999999999999999999988654
No 33
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=8.8e-16 Score=161.60 Aligned_cols=70 Identities=33% Similarity=0.533 Sum_probs=65.5
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC-hHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHH
Q 011584 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH-PQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKE 273 (482)
Q Consensus 204 ~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~-~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~ 273 (482)
.|||+||||+++|+.++||+|||+|+++||||+++. +.|++.|+.|++||++|+|+.+|+.||.++..+.
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~ 73 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGV 73 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhh
Confidence 699999999999999999999999999999999984 6788999999999999999999999999987543
No 34
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.60 E-value=9.5e-16 Score=171.56 Aligned_cols=74 Identities=26% Similarity=0.346 Sum_probs=69.1
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHHHH
Q 011584 202 EGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEEQ 275 (482)
Q Consensus 202 ~~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~~ 275 (482)
...+||+||||+++|+..+||+|||+||++||||+++.+.|...|+.|++||+|||||.+|+.||.+|..+...
T Consensus 571 ~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~ 644 (1136)
T PTZ00341 571 PDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKG 644 (1136)
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCC
Confidence 46899999999999999999999999999999999997788999999999999999999999999998876443
No 35
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.59 E-value=1.1e-15 Score=159.42 Aligned_cols=70 Identities=36% Similarity=0.619 Sum_probs=65.1
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC--hHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH--PQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~--~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
.++||+||||.+++++.+||++||+|||+||||||+. ..|.+.|+.|+.||+|||||..|++||......
T Consensus 7 ~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqi 78 (508)
T KOG0717|consen 7 KRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQI 78 (508)
T ss_pred hhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHH
Confidence 5789999999999999999999999999999999985 468999999999999999999999999987643
No 36
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.59 E-value=1.2e-15 Score=158.05 Aligned_cols=69 Identities=35% Similarity=0.530 Sum_probs=65.3
Q ss_pred CcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHH
Q 011584 205 CPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKE 273 (482)
Q Consensus 205 d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~ 273 (482)
|||+||||+++|+.++||+|||+|+++||||+++.+.+.++|+.|++||++|+|+.+|..||.++..+.
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~ 69 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGF 69 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhcccccc
Confidence 799999999999999999999999999999999877789999999999999999999999999887543
No 37
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.59 E-value=1.7e-15 Score=154.22 Aligned_cols=68 Identities=25% Similarity=0.413 Sum_probs=65.0
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (482)
..|||+||||+++++.++||+|||+|+++||||+|+.+.+.++|+.|++||++|+|+.+|+.||.++.
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~ 70 (306)
T PRK10266 3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQ 70 (306)
T ss_pred cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhc
Confidence 46999999999999999999999999999999999888899999999999999999999999999864
No 38
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.59 E-value=1.3e-15 Score=159.05 Aligned_cols=69 Identities=30% Similarity=0.452 Sum_probs=65.6
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 204 ~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
.|||+||||+++|+.++||+|||+|+++||||+++.+.++++|+.|++||++|+|+.+|+.||.++..+
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~ 71 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDA 71 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccc
Confidence 699999999999999999999999999999999987788999999999999999999999999988654
No 39
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.58 E-value=2.1e-15 Score=152.56 Aligned_cols=70 Identities=29% Similarity=0.404 Sum_probs=67.2
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+..|||+||++|+++||||.|...++.+.|+.|.+||++|+|+++|..||.++...
T Consensus 42 ~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~ 111 (288)
T KOG0715|consen 42 KEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ 111 (288)
T ss_pred CcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence 3499999999999999999999999999999999999999999999999999999999999999998765
No 40
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.58 E-value=1.9e-15 Score=157.88 Aligned_cols=70 Identities=27% Similarity=0.511 Sum_probs=66.3
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+..+||+|||+|+++||||+|+.+.++++|+.|++||++|+||.+|+.||.++..+
T Consensus 2 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g 71 (374)
T PRK14293 2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAG 71 (374)
T ss_pred CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhccccc
Confidence 3699999999999999999999999999999999998889999999999999999999999999988653
No 41
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.58 E-value=1.8e-15 Score=157.84 Aligned_cols=69 Identities=33% Similarity=0.479 Sum_probs=65.8
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 204 ~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
.|||+||||+++|+.++||+|||+|+++||||+++...+.++|+.|++||++|+||.+|+.||.++..+
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~ 70 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAP 70 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcc
Confidence 589999999999999999999999999999999998889999999999999999999999999988653
No 42
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.57 E-value=3.1e-15 Score=156.91 Aligned_cols=70 Identities=31% Similarity=0.514 Sum_probs=65.7
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++|+.+|||+|||+|+++||||+|+ .+.+.++|+.|++||++|+||.+|+.||.++..+
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~ 74 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAG 74 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccc
Confidence 579999999999999999999999999999999998 4579999999999999999999999999998654
No 43
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.56 E-value=3e-15 Score=155.97 Aligned_cols=69 Identities=32% Similarity=0.567 Sum_probs=64.7
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCh--HHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHP--QAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 204 ~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~--~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
.|||+||||+++|+..+||+|||+|+++||||+++.. .|.+.|+.|++||++|+|+.+|..||.++..+
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~ 73 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVD 73 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcc
Confidence 6999999999999999999999999999999999843 68999999999999999999999999988653
No 44
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.54 E-value=1.1e-14 Score=112.70 Aligned_cols=57 Identities=40% Similarity=0.705 Sum_probs=54.2
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC--ChHHHHHHHHHHHHHHHhcChh
Q 011584 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP--HPQAHQAFIKLNKAFKELQDPE 260 (482)
Q Consensus 204 ~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~--~~~a~e~F~~I~~AY~vLsDp~ 260 (482)
.|||+||||+++++..+||++|+++++.||||++. .+.+.+.|..|++||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence 48999999999999999999999999999999998 6789999999999999999985
No 45
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.52 E-value=2.8e-14 Score=148.98 Aligned_cols=82 Identities=34% Similarity=0.501 Sum_probs=74.5
Q ss_pred HHHHHHHhccCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhh
Q 011584 192 FEEVTRIMGVEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (482)
Q Consensus 192 ~~~v~ri~~~~~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (482)
.+++.+++. +.|+|.||||+.++++++|||.||++|.++|||||..+.|++.|+.|+.||++|+|+++|..||..+..
T Consensus 225 adrl~re~~--~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~k 302 (490)
T KOG0720|consen 225 ADRLSRELN--ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDLELKK 302 (490)
T ss_pred HHhhhhhhc--CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHHHHHH
Confidence 455566655 799999999999999999999999999999999999999999999999999999999999999998766
Q ss_pred HHHH
Q 011584 272 KEEQ 275 (482)
Q Consensus 272 ~~~~ 275 (482)
.+..
T Consensus 303 ene~ 306 (490)
T KOG0720|consen 303 ENEL 306 (490)
T ss_pred HHHH
Confidence 5543
No 46
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.52 E-value=2.4e-14 Score=108.71 Aligned_cols=54 Identities=44% Similarity=0.736 Sum_probs=51.9
Q ss_pred CcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC-hHHHHHHHHHHHHHHHhcC
Q 011584 205 CPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH-PQAHQAFIKLNKAFKELQD 258 (482)
Q Consensus 205 d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~-~~a~e~F~~I~~AY~vLsD 258 (482)
|||+||||+++++.++||++|++|++.||||++.. ..+.+.|..|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 69999999999999999999999999999999987 7899999999999999986
No 47
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.49 E-value=4.9e-14 Score=155.02 Aligned_cols=70 Identities=30% Similarity=0.449 Sum_probs=66.3
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHH
Q 011584 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKE 273 (482)
Q Consensus 204 ~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~ 273 (482)
.|||+||||+++|+..+||++||+|+++||||++..+.+..+|+.|++||++|+||.+|+.||.++..+.
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~ 71 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHDGV 71 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhccccc
Confidence 6999999999999999999999999999999999888888999999999999999999999999887553
No 48
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=1.2e-13 Score=129.12 Aligned_cols=67 Identities=39% Similarity=0.567 Sum_probs=63.3
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChH--HHHHHHHHHHHHHHhcChhHHHHHHHHh
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQ--AHQAFIKLNKAFKELQDPEKRKALDEKI 269 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~--a~e~F~~I~~AY~vLsDp~kR~~YD~~~ 269 (482)
..+||+||||.++|+..+|+++||+++++||||+|+... +.+.|+.|++||++|+|+.+|..||..+
T Consensus 5 ~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~ 73 (237)
T COG2214 5 LLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG 73 (237)
T ss_pred hhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence 578999999999999999999999999999999999543 8999999999999999999999999974
No 49
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.43 E-value=1.7e-13 Score=131.61 Aligned_cols=71 Identities=30% Similarity=0.475 Sum_probs=66.2
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC-hHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH-PQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKE 273 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~-~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~ 273 (482)
..|+|+||||+++++..|||+|||+|+++|||||++. .+.++.|..|++||+.|+|...|..|..++....
T Consensus 98 ~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDG 169 (230)
T KOG0721|consen 98 KFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDG 169 (230)
T ss_pred cCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCC
Confidence 6899999999999999999999999999999999987 5678889999999999999999999999987554
No 50
>PHA03102 Small T antigen; Reviewed
Probab=99.43 E-value=7.1e-14 Score=129.12 Aligned_cols=67 Identities=19% Similarity=0.255 Sum_probs=61.2
Q ss_pred CcccccccCCCC--CHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHHH
Q 011584 205 CPYDVIGANHNM--SAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEE 274 (482)
Q Consensus 205 d~Y~VLGV~~~a--s~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~ 274 (482)
.+|+||||+++| |..+||+|||++++++|||+++ ..+.|+.|++||++|+|+.+|..||.++.....
T Consensus 6 ~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg---~~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~ 74 (153)
T PHA03102 6 ELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGG---DEEKMKELNTLYKKFRESVKSLRDLDGEEDSSS 74 (153)
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCc---hhHHHHHHHHHHHHHhhHHHhccccccCCcccc
Confidence 478999999999 9999999999999999999974 468999999999999999999999998866543
No 51
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.32 E-value=2.7e-12 Score=120.92 Aligned_cols=67 Identities=24% Similarity=0.348 Sum_probs=59.1
Q ss_pred CCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCCh------HHHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 011584 204 DCPYDVIGANHN--MSAENIKKRYWKLSLFVHPDKCPHP------QAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (482)
Q Consensus 204 ~d~Y~VLGV~~~--as~~eIKkAYrkLsl~~HPDk~~~~------~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (482)
.|||+||||++. ++..+|+++||+++++||||++... .+.+.|..||+||++|+||.+|+.|+..+.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~l~ 75 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLSLH 75 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHHhc
Confidence 489999999996 6789999999999999999997632 256789999999999999999999997544
No 52
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.32 E-value=3.5e-12 Score=119.62 Aligned_cols=67 Identities=22% Similarity=0.374 Sum_probs=58.9
Q ss_pred CCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCChH----HHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 011584 204 DCPYDVIGANHN--MSAENIKKRYWKLSLFVHPDKCPHPQ----AHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (482)
Q Consensus 204 ~d~Y~VLGV~~~--as~~eIKkAYrkLsl~~HPDk~~~~~----a~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (482)
.|||+||||++. ++..+|+++|++|+++||||++.... +.+.|..||+||++|+||.+|+.|+..+.
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l~ 74 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLLQ 74 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHcc
Confidence 589999999997 78999999999999999999986432 34568899999999999999999988653
No 53
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.29 E-value=6.7e-12 Score=118.44 Aligned_cols=69 Identities=22% Similarity=0.427 Sum_probs=61.4
Q ss_pred CCCCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCCh------HHHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 011584 202 EGDCPYDVIGANHN--MSAENIKKRYWKLSLFVHPDKCPHP------QAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (482)
Q Consensus 202 ~~~d~Y~VLGV~~~--as~~eIKkAYrkLsl~~HPDk~~~~------~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (482)
+..|||++|||++. .+..+|+++||+|+++||||++... .+.+.|..||+||++|+||.+|+.|+..+.
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l~ 78 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLALS 78 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 47899999999997 6789999999999999999998642 256789999999999999999999998654
No 54
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.27 E-value=3.5e-12 Score=124.95 Aligned_cols=77 Identities=27% Similarity=0.486 Sum_probs=71.5
Q ss_pred hccCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHHHH
Q 011584 199 MGVEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEEQ 275 (482)
Q Consensus 199 ~~~~~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~~ 275 (482)
+-|+..|+|+||||+++++..+|.+|||+|+++||||++.++.+.+.|+.|..||++|.|.+.|..||-.+......
T Consensus 28 LYCG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~ydyaldhpd~~ 104 (329)
T KOG0722|consen 28 LYCGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRTQYDYALDHPDEV 104 (329)
T ss_pred hcccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHHhHHHHhcCchHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999988766543
No 55
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.26 E-value=6.7e-12 Score=128.03 Aligned_cols=77 Identities=32% Similarity=0.510 Sum_probs=68.0
Q ss_pred HHHHHHHhc-cCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCh----HHHHHHHHHHHHHHHhcChhHHHHHH
Q 011584 192 FEEVTRIMG-VEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHP----QAHQAFIKLNKAFKELQDPEKRKALD 266 (482)
Q Consensus 192 ~~~v~ri~~-~~~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~----~a~e~F~~I~~AY~vLsDp~kR~~YD 266 (482)
.+...|+.. ...+|||+||||.++|+..||-||||+++.+||||...+. .|+.+|..|..|-+||+||++|+.||
T Consensus 381 le~Akrlkkqs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFD 460 (504)
T KOG0624|consen 381 LERAKRLKKQSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFD 460 (504)
T ss_pred HHHHHHHHHHhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhcc
Confidence 444555543 3589999999999999999999999999999999998864 48999999999999999999999999
Q ss_pred HH
Q 011584 267 EK 268 (482)
Q Consensus 267 ~~ 268 (482)
..
T Consensus 461 nG 462 (504)
T KOG0624|consen 461 NG 462 (504)
T ss_pred CC
Confidence 84
No 56
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.24 E-value=1.6e-11 Score=116.25 Aligned_cols=68 Identities=24% Similarity=0.383 Sum_probs=59.0
Q ss_pred CCCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCC-hH-----HHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 011584 203 GDCPYDVIGANHN--MSAENIKKRYWKLSLFVHPDKCPH-PQ-----AHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (482)
Q Consensus 203 ~~d~Y~VLGV~~~--as~~eIKkAYrkLsl~~HPDk~~~-~~-----a~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (482)
..|||+||||++. ++..+|+++|++|+++||||++.. .. +.+.+..||+||++|+||.+|+.|+..+.
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l~ 80 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHLR 80 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHhc
Confidence 5799999999985 688999999999999999999873 22 34557999999999999999999998543
No 57
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.21 E-value=1.5e-11 Score=123.42 Aligned_cols=89 Identities=20% Similarity=0.283 Sum_probs=71.8
Q ss_pred cccCCCCchhhHhhhhh--chHHHHHHHHHHhc--------------------cCCCCcccccccCCCCCHHHHHHHHHH
Q 011584 170 LFIGPPPPAMVAEAETA--NEAERFEEVTRIMG--------------------VEGDCPYDVIGANHNMSAENIKKRYWK 227 (482)
Q Consensus 170 ~~igp~~p~~~~~~~~~--~~~e~~~~v~ri~~--------------------~~~~d~Y~VLGV~~~as~~eIKkAYrk 227 (482)
+-+++.+..++..++.. .+...|..+...+. ....++|+||||++++|.++||++||+
T Consensus 144 G~l~~~E~~~L~~Ia~~Lgis~~df~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ay~vLgv~~~as~~eIk~aYr~ 223 (267)
T PRK09430 144 GSLHPNERQVLYVIAEELGFSRFQFDQLLRMMQAGFRFQQQQGGGGYQQAQRGPTLEDAYKVLGVSESDDDQEIKRAYRK 223 (267)
T ss_pred CCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcccccccccccccCCCcHHhHHHHcCCCCCCCHHHHHHHHHH
Confidence 34577788888888877 56666666654322 123589999999999999999999999
Q ss_pred HHHhhCCCCCCC--------hHHHHHHHHHHHHHHHhcC
Q 011584 228 LSLFVHPDKCPH--------PQAHQAFIKLNKAFKELQD 258 (482)
Q Consensus 228 Lsl~~HPDk~~~--------~~a~e~F~~I~~AY~vLsD 258 (482)
|+++||||++.. +.++++|+.|++||++|+.
T Consensus 224 L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 224 LMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred HHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999742 3588999999999999985
No 58
>PHA02624 large T antigen; Provisional
Probab=99.12 E-value=3e-11 Score=131.85 Aligned_cols=97 Identities=19% Similarity=0.210 Sum_probs=76.4
Q ss_pred CCCcccccccCCCC--CHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHH--HHHhhhHHHHHHH
Q 011584 203 GDCPYDVIGANHNM--SAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKAL--DEKIKLKEEQEKF 278 (482)
Q Consensus 203 ~~d~Y~VLGV~~~a--s~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~Y--D~~~~~~~~~~~~ 278 (482)
..++|+||||+++| +..+||+|||+++++||||++ ++.+.|+.|+.||++|+|+.+|..| |..-..+ .
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKg---Gdeekfk~Ln~AYevL~d~~k~~r~~fd~~~~~~-----v 81 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKG---GDEEKMKRLNSLYKKLQEGVKSARQSFGTQDSSE-----I 81 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC---CcHHHHHHHHHHHHHHhcHHHhhhcccccccccC-----C
Confidence 45799999999999 999999999999999999996 4568999999999999999999999 4320000 0
Q ss_pred HHHHhhhhhhhhhhhhhc---CCCCCchhHHhh
Q 011584 279 KVELKAMQEGAQWRKSQG---ILMEGDDELLAD 308 (482)
Q Consensus 279 ~~e~~~~~~~~~wr~~fG---~~~~gDeEllAG 308 (482)
.......|...|+.|+. ..++.+++.+..
T Consensus 82 -~~~~~~~w~~ww~~f~~k~~EDI~c~E~~y~S 113 (647)
T PHA02624 82 -PTYGTPEWEQWWEEFNEKWDEDLFCDEELSSS 113 (647)
T ss_pred -CCCccccHHHHHHHhhhhhhccchhhhhccCC
Confidence 01245568899999983 567777666643
No 59
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=3.3e-11 Score=118.18 Aligned_cols=70 Identities=40% Similarity=0.621 Sum_probs=64.6
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCh--HHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHP--QAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~--~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||.||||.+.|+..+|++||+++++.||||+|+.+ .+..+|+.|.+||++|+|+.+|..||.++...
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~ 73 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEG 73 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccc
Confidence 47899999999999999999999999999999998876 56668999999999999999999999999733
No 60
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=2.5e-10 Score=108.63 Aligned_cols=84 Identities=32% Similarity=0.525 Sum_probs=72.8
Q ss_pred HHHHHHHhcc----CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC--hHHHHHHHHHHHHHHHhcChhHHHHH
Q 011584 192 FEEVTRIMGV----EGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH--PQAHQAFIKLNKAFKELQDPEKRKAL 265 (482)
Q Consensus 192 ~~~v~ri~~~----~~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~--~~a~e~F~~I~~AY~vLsDp~kR~~Y 265 (482)
-.+|+|++.. -+.|+|+||.|.+..+.++||+.||+|++.+|||||++ +.|..+|..|.+||.+|-|+..|...
T Consensus 37 ~~qIeRllrpgstyfnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~ 116 (250)
T KOG1150|consen 37 KQQIERLLRPGSTYFNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRC 116 (250)
T ss_pred HHHHHHHhcCCccccccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 3567777763 37899999999999999999999999999999999995 57999999999999999999988888
Q ss_pred HHHhhhHHHH
Q 011584 266 DEKIKLKEEQ 275 (482)
Q Consensus 266 D~~~~~~~~~ 275 (482)
+..+..+...
T Consensus 117 ~~~y~~ak~~ 126 (250)
T KOG1150|consen 117 LDVYTAAKNR 126 (250)
T ss_pred HHHHHHHHHH
Confidence 7766655443
No 61
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.05 E-value=1e-10 Score=121.64 Aligned_cols=71 Identities=34% Similarity=0.506 Sum_probs=64.9
Q ss_pred ccCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC--hHHHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 011584 200 GVEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH--PQAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (482)
Q Consensus 200 ~~~~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~--~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (482)
..+..|||.||||..+++..+||++||++++.||||++.. ..++..|+.|.+||.+|+||.+|..||....
T Consensus 369 kSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~d 441 (486)
T KOG0550|consen 369 KSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQD 441 (486)
T ss_pred HhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccccc
Confidence 3457899999999999999999999999999999999884 4789999999999999999999999997543
No 62
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.03 E-value=2e-10 Score=101.54 Aligned_cols=52 Identities=25% Similarity=0.256 Sum_probs=47.8
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhc
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQ 257 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLs 257 (482)
..++|+||||+++++.++|+++||+|++++|||+. +..+.|++|++||++|.
T Consensus 64 ~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkg---Gs~~~~~kIneAyevL~ 115 (116)
T PTZ00100 64 KSEAYKILNISPTASKERIREAHKQLMLRNHPDNG---GSTYIASKVNEAKDLLL 115 (116)
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999985 45678999999999985
No 63
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=98.90 E-value=2.5e-09 Score=101.03 Aligned_cols=67 Identities=22% Similarity=0.360 Sum_probs=59.8
Q ss_pred CCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCCh------HHHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 011584 204 DCPYDVIGANHN--MSAENIKKRYWKLSLFVHPDKCPHP------QAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (482)
Q Consensus 204 ~d~Y~VLGV~~~--as~~eIKkAYrkLsl~~HPDk~~~~------~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (482)
.|||++|||++. .+...++++|+.|.+.+|||+.... .+.+....||+||.+|+||.+|+.|=..+.
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~ 76 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALN 76 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhc
Confidence 589999999987 8999999999999999999998643 256678999999999999999999988655
No 64
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=98.83 E-value=3.6e-09 Score=110.79 Aligned_cols=72 Identities=31% Similarity=0.530 Sum_probs=65.1
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC------hHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHH
Q 011584 202 EGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH------PQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKE 273 (482)
Q Consensus 202 ~~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~------~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~ 273 (482)
..-|+|+||||+.+++..+||++||+|+.+|||||.+. ...++.++.|++||..|+|...|..|-.+|....
T Consensus 96 ~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~ 173 (610)
T COG5407 96 RGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDS 173 (610)
T ss_pred cCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCC
Confidence 46899999999999999999999999999999999774 2478999999999999999999999999865443
No 65
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.77 E-value=1.3e-08 Score=94.81 Aligned_cols=56 Identities=29% Similarity=0.405 Sum_probs=49.1
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCCCCh------HHHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 011584 215 NMSAENIKKRYWKLSLFVHPDKCPHP------QAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (482)
Q Consensus 215 ~as~~eIKkAYrkLsl~~HPDk~~~~------~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (482)
+.+..+|+++|++|+++||||++... .+.+.|..||+||++|+||.+|+.|+..+.
T Consensus 2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~ 63 (157)
T TIGR00714 2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH 63 (157)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 35778999999999999999997632 267889999999999999999999998765
No 66
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.54 E-value=4.6e-08 Score=97.07 Aligned_cols=74 Identities=22% Similarity=0.170 Sum_probs=64.8
Q ss_pred HHhccCCCCcccccccCC---CCCHHHHHHHHHHHHHhhCCCCCC---ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 011584 197 RIMGVEGDCPYDVIGANH---NMSAENIKKRYWKLSLFVHPDKCP---HPQAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (482)
Q Consensus 197 ri~~~~~~d~Y~VLGV~~---~as~~eIKkAYrkLsl~~HPDk~~---~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (482)
..-.|+..|+|.+|||+. -++..+|.++.++.+.+||||+.. +.+..+.|+.|+.||+||+|+.+|.+||....
T Consensus 36 d~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~df 115 (379)
T COG5269 36 DFKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSNDF 115 (379)
T ss_pred hhhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccccc
Confidence 344677899999999985 488899999999999999999974 35688999999999999999999999998543
No 67
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.21 E-value=2.6e-06 Score=96.62 Aligned_cols=100 Identities=23% Similarity=0.347 Sum_probs=65.3
Q ss_pred CCCcccccccCCC----CCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcC----------hhHHHHHHHH
Q 011584 203 GDCPYDVIGANHN----MSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQD----------PEKRKALDEK 268 (482)
Q Consensus 203 ~~d~Y~VLGV~~~----as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsD----------p~kR~~YD~~ 268 (482)
..+.|+||.|+-+ ...+.||++|++|+.+|||||| |...+.|..|++||++|+. |.+--.. .
T Consensus 1280 ~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKN--PEGRemFe~VnKAYE~L~~~ta~~~~GPdP~riiL~--L 1355 (2235)
T KOG1789|consen 1280 VDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKN--PEGREMFERVNKAYELLSSETANNSGGPDPHRIVLC--L 1355 (2235)
T ss_pred hHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCC--chHHHHHHHHHHHHHHHHHHHhhcCCCCChhHhhHH--H
Confidence 3578999999853 4457899999999999999999 5778999999999999983 2211100 0
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhhhhhhcCCCCCchhHH
Q 011584 269 IKLKEEQEKFKVELKAMQEGAQWRKSQGILMEGDDELL 306 (482)
Q Consensus 269 ~~~~~~~~~~~~e~~~~~~~~~wr~~fG~~~~gDeEll 306 (482)
-....-...+..+++.+.++.+=.-+..++++.+++.+
T Consensus 1356 KaQsILy~Ry~~~L~PyKYAGYPMLi~tiT~e~~D~~l 1393 (2235)
T KOG1789|consen 1356 KAQSILYSRYSQELSPYKYAGYPMLIKTITLEAKDEAL 1393 (2235)
T ss_pred HhHHHHHHHhhhhcCccccCcchhhhhhhhhcccchhh
Confidence 00001112233444444555554444557777776655
No 68
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.86 E-value=1.5e-05 Score=77.90 Aligned_cols=54 Identities=24% Similarity=0.501 Sum_probs=50.6
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHH-Hhc
Q 011584 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFK-ELQ 257 (482)
Q Consensus 204 ~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~-vLs 257 (482)
..||.||||..+|+.++++.+|..|++++|||........+.|.+|.+||. ||+
T Consensus 47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq 101 (342)
T KOG0568|consen 47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQ 101 (342)
T ss_pred HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999988888899999999998 776
No 69
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.13 E-value=0.00064 Score=59.34 Aligned_cols=49 Identities=24% Similarity=0.371 Sum_probs=43.1
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcCh
Q 011584 208 DVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDP 259 (482)
Q Consensus 208 ~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp 259 (482)
.||||+++++.+.||.++|++.+..|||+...| -.-.+||+|+++|...
T Consensus 60 lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP---YlAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 60 LILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP---YLASKINEAKDLLEGT 108 (112)
T ss_pred HHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH---HHHHHHHHHHHHHhcc
Confidence 489999999999999999999999999998554 4556899999999753
No 70
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.80 E-value=0.0011 Score=62.73 Aligned_cols=87 Identities=17% Similarity=0.204 Sum_probs=62.1
Q ss_pred cccCCCCchhhHhhhhhc--hHHHHHHHHHHhccCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC--------
Q 011584 170 LFIGPPPPAMVAEAETAN--EAERFEEVTRIMGVEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH-------- 239 (482)
Q Consensus 170 ~~igp~~p~~~~~~~~~~--~~e~~~~v~ri~~~~~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~-------- 239 (482)
|.++..+..++..+.... ....++...........+.|.+||+....+..+|+++|+++...+|||+-..
T Consensus 77 g~~~~~e~~~l~~~~~l~~~~~~~~e~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~ 156 (174)
T COG1076 77 GLDHAKERQTLRDIAFLLEQSELREELEEAREQLDREDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFI 156 (174)
T ss_pred cccchhHHHHHHHHHHHHHhhHHHHHHHHHHHcccchhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHH
Confidence 344555566666555552 3333333332222223789999999999999999999999999999999542
Q ss_pred hHHHHHHHHHHHHHHHh
Q 011584 240 PQAHQAFIKLNKAFKEL 256 (482)
Q Consensus 240 ~~a~e~F~~I~~AY~vL 256 (482)
..+.+.++.|++||+.+
T Consensus 157 ~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 157 EKLKEKLQEIQEAYEDI 173 (174)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 24788899999999854
No 71
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=96.60 E-value=0.0025 Score=59.29 Aligned_cols=68 Identities=29% Similarity=0.455 Sum_probs=55.8
Q ss_pred CCCcccccccCC--CCCHHHHHHHHHHHHHhhCCCCCCC------hHHHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 011584 203 GDCPYDVIGANH--NMSAENIKKRYWKLSLFVHPDKCPH------PQAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (482)
Q Consensus 203 ~~d~Y~VLGV~~--~as~~eIKkAYrkLsl~~HPDk~~~------~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (482)
..+||.++|... ...++-++--|.-.+.++|||+..+ ..|.+....|++||.+|.||-.|+.|-..+.
T Consensus 7 ~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilkl~ 82 (168)
T KOG3192|consen 7 PSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLKLK 82 (168)
T ss_pred HHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 467999998654 4667777778999999999999542 2478889999999999999999999987543
No 72
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=95.52 E-value=0.013 Score=63.50 Aligned_cols=44 Identities=32% Similarity=0.487 Sum_probs=32.3
Q ss_pred cCCCCCHHHHHHHHHHHHHhhCCCCCCChH--------HHHHHHHHHHHHHH
Q 011584 212 ANHNMSAENIKKRYWKLSLFVHPDKCPHPQ--------AHQAFIKLNKAFKE 255 (482)
Q Consensus 212 V~~~as~~eIKkAYrkLsl~~HPDk~~~~~--------a~e~F~~I~~AY~v 255 (482)
|.--.+...|||+|||.+|.+||||.+..+ |++.|..+++||..
T Consensus 396 ltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~ 447 (453)
T KOG0431|consen 396 LTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNK 447 (453)
T ss_pred hhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHh
Confidence 334478999999999999999999987543 44555555555543
No 73
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=94.39 E-value=0.031 Score=52.90 Aligned_cols=69 Identities=22% Similarity=0.284 Sum_probs=53.4
Q ss_pred CcccccccCCCC--CHHHHHHHHHHHHHhhCCCCCCChH------HHHHHHHHHHHHHHhcChhHHHHHHHHhhhHH
Q 011584 205 CPYDVIGANHNM--SAENIKKRYWKLSLFVHPDKCPHPQ------AHQAFIKLNKAFKELQDPEKRKALDEKIKLKE 273 (482)
Q Consensus 205 d~Y~VLGV~~~a--s~~eIKkAYrkLsl~~HPDk~~~~~------a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~ 273 (482)
||+..+|..+.+ ..+.++..|+.+.+.||||+....+ +-+.+..++.||.+|.+|-+|..|=.....+.
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~~g~ 78 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALADGL 78 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhcccc
Confidence 345555555543 3456889999999999999987432 45678999999999999999999998777443
No 74
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=89.02 E-value=0.63 Score=42.26 Aligned_cols=50 Identities=24% Similarity=0.295 Sum_probs=37.4
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcC
Q 011584 206 PYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQD 258 (482)
Q Consensus 206 ~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsD 258 (482)
-..||||++..+.++|.+.|.+|-...+|++. |+.-.=.+|..|.++|..
T Consensus 60 A~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kG---GSfYLQSKV~rAKErl~~ 109 (127)
T PF03656_consen 60 ARQILNVKEELSREEIQKRYKHLFKANDPSKG---GSFYLQSKVFRAKERLEQ 109 (127)
T ss_dssp HHHHHT--G--SHHHHHHHHHHHHHHT-CCCT---S-HHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCccCHHHHHHHHHHHHhccCCCcC---CCHHHHHHHHHHHHHHHH
Confidence 34678999999999999999999999999987 666667788889888873
No 75
>PRK05339 PEP synthetase regulatory protein; Provisional
Probab=75.90 E-value=9.1 Score=39.08 Aligned_cols=70 Identities=24% Similarity=0.410 Sum_probs=61.3
Q ss_pred ChHHHHHHHHHhCCcch------------hhHHHHHHHhhCCceeeecCCCChhHHHHHHHHHHhcCccccCCcceeecC
Q 011584 2 SPEEVVRDVLTQFPNVG------------NDLKTLLQMIDDGQAVDIRGISEKSLSKHLRKLFLSLDLKESKDRVFLRRP 69 (482)
Q Consensus 2 ~~~~~~~~~l~~~p~~~------------~~~~~ll~~id~G~~~~i~Gi~~~~l~~~l~~lf~~l~l~~~~~g~~~l~~ 69 (482)
+++.|++-.|++||++. +.+.++|..|....++.+.=|-|+.||..|+.....+|+.
T Consensus 17 TAe~v~~A~l~QF~~~~~~~~~~p~v~~~~~~~~i~~~~~~~~~iV~~Tlv~~elr~~l~~~~~~~~i~----------- 85 (269)
T PRK05339 17 TAETVGRAALSQFPNVEFEEHRYPFVRTEEKADEVLEEINAERPIVFYTLVDPELREILEERCAEFGIP----------- 85 (269)
T ss_pred HHHHHHHHHHHhCCCCCeeEEEeCCcCCHHHHHHHHHHHHhcCCEEEEeCCCHHHHHHHHHHHHHcCCC-----------
Confidence 47899999999999763 4588899999888899999999999999999999888775
Q ss_pred CCCCchhhHHHHHhhhh
Q 011584 70 TDRPTLDVVGTLIQTHM 86 (482)
Q Consensus 70 ~~~~t~~~~~~~~~~~~ 86 (482)
.+|+++++|..-.
T Consensus 86 ----~vdll~p~i~~le 98 (269)
T PRK05339 86 ----CIDILGPLIAPLE 98 (269)
T ss_pred ----EEeccHHHHHHHH
Confidence 6899999998853
No 76
>PF03618 Kinase-PPPase: Kinase/pyrophosphorylase; InterPro: IPR005177 This entry represents a family of uncharacterised proteins which are predicted to function as phosphotransferases.; GO: 0005524 ATP binding, 0016772 transferase activity, transferring phosphorus-containing groups
Probab=71.85 E-value=13 Score=37.61 Aligned_cols=71 Identities=25% Similarity=0.453 Sum_probs=62.1
Q ss_pred ChHHHHHHHHHhCCcc------------hhhHHHHHHHhhCCceeeecCCCChhHHHHHHHHHHhcCccccCCcceeecC
Q 011584 2 SPEEVVRDVLTQFPNV------------GNDLKTLLQMIDDGQAVDIRGISEKSLSKHLRKLFLSLDLKESKDRVFLRRP 69 (482)
Q Consensus 2 ~~~~~~~~~l~~~p~~------------~~~~~~ll~~id~G~~~~i~Gi~~~~l~~~l~~lf~~l~l~~~~~g~~~l~~ 69 (482)
+++.|++-.|++||++ ...+.++|+.|..-.++.+.=|-|+.|+.+|+......|+.
T Consensus 11 TAe~v~~A~l~QF~~~~~~~~~~p~I~~~~~~~~il~~i~~~~~iV~~Tlv~~~lr~~l~~~~~~~~i~----------- 79 (255)
T PF03618_consen 11 TAETVARAALAQFPDVEFEIHRFPFIRTEEQLDEILEEIKEENAIVFYTLVDPELREYLEEFCREHGIP----------- 79 (255)
T ss_pred HHHHHHHHHHHhCCCCceEEEECCCcCCHHHHHHHHHHHhccCCEEEEeCCCHHHHHHHHHHHHhcCCC-----------
Confidence 4788999999999887 46789999999998889999999999999999998887764
Q ss_pred CCCCchhhHHHHHhhhhh
Q 011584 70 TDRPTLDVVGTLIQTHME 87 (482)
Q Consensus 70 ~~~~t~~~~~~~~~~~~~ 87 (482)
.+|++++++..-.+
T Consensus 80 ----~~Dll~~~l~~l~~ 93 (255)
T PF03618_consen 80 ----CVDLLGPLLSALEE 93 (255)
T ss_pred ----EEeccHHHHHHHHH
Confidence 78999999988633
No 77
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=70.56 E-value=4.6 Score=41.77 Aligned_cols=54 Identities=28% Similarity=0.403 Sum_probs=44.2
Q ss_pred CCHHHHHHHHHHHHHhhCCCCCC-----ChHHHHHHHHHHHHHHHhcChhHHHHHHHHh
Q 011584 216 MSAENIKKRYWKLSLFVHPDKCP-----HPQAHQAFIKLNKAFKELQDPEKRKALDEKI 269 (482)
Q Consensus 216 as~~eIKkAYrkLsl~~HPDk~~-----~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~ 269 (482)
++..+|..+|+..++.+||++.. .-...+.|++|.+||.+|++...|..+|...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~~ 62 (335)
T KOG0724|consen 4 ASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSWD 62 (335)
T ss_pred ccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhhh
Confidence 56778999999999999999874 2246777999999999999977666666654
No 78
>PF13446 RPT: A repeated domain in UCH-protein
Probab=57.70 E-value=17 Score=28.37 Aligned_cols=26 Identities=12% Similarity=0.275 Sum_probs=23.6
Q ss_pred CcccccccCCCCCHHHHHHHHHHHHH
Q 011584 205 CPYDVIGANHNMSAENIKKRYWKLSL 230 (482)
Q Consensus 205 d~Y~VLGV~~~as~~eIKkAYrkLsl 230 (482)
..|.+|||+++.+++.|-.+|.....
T Consensus 6 ~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 6 EAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 46999999999999999999998776
No 79
>PRK02363 DNA-directed RNA polymerase subunit delta; Reviewed
Probab=48.11 E-value=35 Score=31.16 Aligned_cols=64 Identities=19% Similarity=0.259 Sum_probs=47.0
Q ss_pred CChHHHHHHHHHhCCcchhhHHHHHHHhhCCceeeecCCCChhHHHHHHHHHHhcCcccc----CCcceeecCC
Q 011584 1 MSPEEVVRDVLTQFPNVGNDLKTLLQMIDDGQAVDIRGISEKSLSKHLRKLFLSLDLKES----KDRVFLRRPT 70 (482)
Q Consensus 1 ~~~~~~~~~~l~~~p~~~~~~~~ll~~id~G~~~~i~Gi~~~~l~~~l~~lf~~l~l~~~----~~g~~~l~~~ 70 (482)
||--+|+.+||.+. .-.=-+..|+..| +...|+++..+..++.+|+-.|++--+ |+|.|+|..-
T Consensus 3 ~S~idvAy~iL~~~-~~~m~f~dL~~ev-----~~~~~~s~e~~~~~iaq~YtdLn~DGRFi~lG~n~WgLr~w 70 (129)
T PRK02363 3 LSLIEVAYEILKEK-KEPMSFYDLVNEI-----QKYLGKSDEEIRERIAQFYTDLNLDGRFISLGDNKWGLRSW 70 (129)
T ss_pred ccHHHHHHHHHHHc-CCcccHHHHHHHH-----HHHhCCCHHHHHHHHHHHHHHHhccCCeeEcCCCceecccc
Confidence 45567899999876 2222344555433 345779999999999999999988744 9999999874
No 80
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=42.28 E-value=80 Score=26.39 Aligned_cols=46 Identities=7% Similarity=0.061 Sum_probs=33.0
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIK 248 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~ 248 (482)
|+|.-.++|+.+-++..||+.|-++.++++.=-..+.....++|..
T Consensus 2 CRNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~PS~~n~~AFe~ 47 (88)
T COG5552 2 CRNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHPSAANAEAFEA 47 (88)
T ss_pred ccchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCcchhhHHHHHH
Confidence 5677789999999999999999877777765444443344445543
No 81
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=39.24 E-value=53 Score=31.91 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=29.3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhc
Q 011584 213 NHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQ 257 (482)
Q Consensus 213 ~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLs 257 (482)
+++|+.+||..|+.++..+|--|. ..-..|-.||+.|.
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd~-------~~~~~IEaAYD~IL 38 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGDE-------KSREAIEAAYDAIL 38 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCH-------HHHHHHHHHHHHHH
Confidence 478999999999999999994443 45566888887443
No 82
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=36.00 E-value=76 Score=28.20 Aligned_cols=25 Identities=24% Similarity=0.428 Sum_probs=21.2
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCCC
Q 011584 214 HNMSAENIKKRYWKLSLFVHPDKCP 238 (482)
Q Consensus 214 ~~as~~eIKkAYrkLsl~~HPDk~~ 238 (482)
+..+..+++.+.|.+-+.+|||...
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~ 28 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFG 28 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccc
Confidence 3456788999999999999999865
No 83
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=31.15 E-value=1.3e+02 Score=25.30 Aligned_cols=45 Identities=13% Similarity=0.011 Sum_probs=34.3
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFI 247 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~ 247 (482)
|+|--.+.|+.|-++.+||..|-.+.++++.=-..+.....+.|.
T Consensus 2 CRnI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps~an~eaF~ 46 (78)
T PF10041_consen 2 CRNIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKPSAANAEAFD 46 (78)
T ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcchhhHHHHH
Confidence 566667788999999999999999988888766655444445554
No 84
>PF12626 PolyA_pol_arg_C: Polymerase A arginine-rich C-terminus; PDB: 3AQN_A 3AQK_A 3AQM_B 3AQL_B.
Probab=20.66 E-value=1.3e+02 Score=27.13 Aligned_cols=52 Identities=25% Similarity=0.305 Sum_probs=31.4
Q ss_pred HHHHHHhcChhHHHHHHHHhhhHHHHHHHHHHHhhhhhhhhhhhhhcCCCCCchhHHh
Q 011584 250 NKAFKELQDPEKRKALDEKIKLKEEQEKFKVELKAMQEGAQWRKSQGILMEGDDELLA 307 (482)
Q Consensus 250 ~~AY~vLsDp~kR~~YD~~~~~~~~~~~~~~e~~~~~~~~~wr~~fG~~~~gDeEllA 307 (482)
..+|.+|..|.-|+.||-.+--..- ++...++ +..|..|+..+-.....++.
T Consensus 52 kr~~~ll~hprFRAAyDFL~LR~~~-ge~~~~l-----~~WW~~fq~~~~~~r~~~~~ 103 (124)
T PF12626_consen 52 KRAFRLLEHPRFRAAYDFLLLRAEA-GEELSEL-----AEWWTEFQEADEEQREAMID 103 (124)
T ss_dssp TTHHHHHHSTTHHHHHHHHHHHHHH--HHHHHH-----HHHHHHHTTS-HHHHHHHHH
T ss_pred CCHHHHHhCchHHHHHHHHHHHHHh-CCCcHHH-----HHHHHHHHhCCHHHHHHHHH
Confidence 3578999999999999976543333 2333333 57788887544333333443
Done!