Query 011584
Match_columns 482
No_of_seqs 414 out of 2250
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 11:11:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011584.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011584hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hdj_A Human HSP40, HDJ-1; mol 99.8 4.1E-19 1.4E-23 144.0 7.9 70 203-272 2-71 (77)
2 2ctp_A DNAJ homolog subfamily 99.8 5.4E-19 1.8E-23 143.7 6.9 70 202-271 5-74 (78)
3 2cug_A Mkiaa0962 protein; DNAJ 99.8 4E-19 1.4E-23 147.9 5.3 71 201-271 14-84 (88)
4 2ctr_A DNAJ homolog subfamily 99.8 1.3E-18 4.4E-23 144.9 7.9 71 202-272 5-75 (88)
5 2ctw_A DNAJ homolog subfamily 99.7 2.2E-18 7.6E-23 149.1 8.4 76 199-274 12-88 (109)
6 2dn9_A DNAJ homolog subfamily 99.7 1.4E-18 4.6E-23 141.5 6.5 70 202-271 5-75 (79)
7 1wjz_A 1700030A21RIK protein; 99.7 1.9E-18 6.6E-23 144.9 6.6 69 203-271 15-90 (94)
8 2ej7_A HCG3 gene; HCG3 protein 99.7 2.5E-18 8.7E-23 140.8 7.0 69 203-271 8-78 (82)
9 2ctq_A DNAJ homolog subfamily 99.7 3.5E-18 1.2E-22 148.5 7.9 71 203-273 19-90 (112)
10 2och_A Hypothetical protein DN 99.7 3.7E-18 1.3E-22 137.1 7.4 66 203-270 7-72 (73)
11 2qsa_A DNAJ homolog DNJ-2; J-d 99.7 2.4E-18 8.1E-23 148.6 6.6 87 202-296 13-104 (109)
12 2yua_A Williams-beuren syndrom 99.7 4.2E-18 1.4E-22 144.8 7.1 71 203-273 16-87 (99)
13 2ys8_A RAB-related GTP-binding 99.7 3.4E-18 1.2E-22 143.1 6.4 75 187-263 12-86 (90)
14 2lgw_A DNAJ homolog subfamily 99.7 1.2E-17 4E-22 142.5 7.9 71 204-274 2-74 (99)
15 2dmx_A DNAJ homolog subfamily 99.7 9.5E-18 3.2E-22 140.5 6.7 68 203-270 8-77 (92)
16 2o37_A Protein SIS1; HSP40, J- 99.7 1.8E-17 6.1E-22 139.1 7.7 69 203-273 7-75 (92)
17 1bq0_A DNAJ, HSP40; chaperone, 99.7 6.1E-18 2.1E-22 144.7 2.8 71 203-273 2-73 (103)
18 3apq_A DNAJ homolog subfamily 99.6 2.1E-16 7.2E-21 148.6 6.7 70 204-273 2-72 (210)
19 2l6l_A DNAJ homolog subfamily 99.6 2.8E-16 9.4E-21 143.5 6.8 71 202-272 8-85 (155)
20 3hho_A CO-chaperone protein HS 99.6 7.6E-16 2.6E-20 143.7 6.4 68 203-270 3-78 (174)
21 1fpo_A HSC20, chaperone protei 99.6 1.5E-15 5.1E-20 141.5 5.9 66 205-270 2-75 (171)
22 3lz8_A Putative chaperone DNAJ 99.6 2.3E-16 8E-21 160.7 0.0 69 203-271 27-95 (329)
23 1gh6_A Large T antigen; tumor 99.5 2.4E-16 8.1E-21 137.9 -3.1 64 203-269 7-72 (114)
24 3bvo_A CO-chaperone protein HS 99.5 6.4E-15 2.2E-19 141.1 6.4 67 203-269 42-116 (207)
25 1iur_A KIAA0730 protein; DNAJ 99.5 3E-15 1E-19 125.1 2.5 59 204-262 16-76 (88)
26 2pf4_E Small T antigen; PP2A, 99.5 1.2E-15 4.2E-20 142.4 -0.7 65 203-270 10-76 (174)
27 1faf_A Large T antigen; J doma 99.5 4.2E-15 1.4E-19 121.6 2.6 59 204-265 11-71 (79)
28 1n4c_A Auxilin; four helix bun 99.5 2.9E-15 9.9E-20 140.7 1.8 63 203-265 116-182 (182)
29 3uo3_A J-type CO-chaperone JAC 99.5 1.3E-14 4.3E-19 136.4 4.7 66 202-269 9-81 (181)
30 2qwo_B Putative tyrosine-prote 99.5 9.2E-15 3.1E-19 123.2 2.7 55 204-258 33-91 (92)
31 3ag7_A Putative uncharacterize 99.5 7.3E-15 2.5E-19 126.8 1.9 58 202-260 39-104 (106)
32 2guz_A Mitochondrial import in 99.4 2.9E-14 9.8E-19 114.3 0.8 56 204-262 14-70 (71)
33 3apo_A DNAJ homolog subfamily 99.4 3.7E-14 1.3E-18 157.4 -0.3 74 202-275 19-93 (780)
34 2y4t_A DNAJ homolog subfamily 98.8 3E-09 1E-13 106.4 5.1 65 203-267 381-449 (450)
35 2guz_B Mitochondrial import in 98.4 9E-08 3.1E-12 75.5 3.4 51 205-258 5-58 (65)
36 2pzi_A Probable serine/threoni 86.1 0.69 2.4E-05 50.3 5.4 52 197-255 622-675 (681)
37 2krc_A DNA-directed RNA polyme 34.0 47 0.0016 27.7 4.6 62 1-70 13-80 (99)
38 1e91_A Paired amphipathic heli 24.8 37 0.0013 27.4 2.3 47 7-54 17-68 (85)
No 1
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.77 E-value=4.1e-19 Score=144.04 Aligned_cols=70 Identities=33% Similarity=0.527 Sum_probs=66.6
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
..|||+||||+++++.++||++|++|+++||||+++.+.+.+.|+.|++||++|+||.+|..||.++..+
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 71 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEG 71 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGG
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccc
Confidence 4699999999999999999999999999999999998899999999999999999999999999987654
No 2
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=5.4e-19 Score=143.65 Aligned_cols=70 Identities=36% Similarity=0.554 Sum_probs=66.6
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhh
Q 011584 202 EGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (482)
Q Consensus 202 ~~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (482)
...|||+||||+++++..+||++|++|+++||||++..+++.+.|+.|++||++|+||.+|..||.++..
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 74 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSG 74 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 3679999999999999999999999999999999999999999999999999999999999999998753
No 3
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.76 E-value=4e-19 Score=147.93 Aligned_cols=71 Identities=37% Similarity=0.484 Sum_probs=67.1
Q ss_pred cCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhh
Q 011584 201 VEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (482)
Q Consensus 201 ~~~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (482)
....|||+||||+++++..+||++||+|+++||||+++.+.+.+.|+.|++||++|+||.+|..||.++..
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 34789999999999999999999999999999999999889999999999999999999999999998753
No 4
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=1.3e-18 Score=144.89 Aligned_cols=71 Identities=31% Similarity=0.523 Sum_probs=67.0
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 202 EGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 202 ~~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
...|||+||||+++++.++||++||+|+++||||+++.+.+.+.|+.|++||++|+||.+|..||.++...
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 75 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSA 75 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 36799999999999999999999999999999999998899999999999999999999999999987543
No 5
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.74 E-value=2.2e-18 Score=149.15 Aligned_cols=76 Identities=37% Similarity=0.589 Sum_probs=69.5
Q ss_pred hccCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHHH
Q 011584 199 MGVEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEE 274 (482)
Q Consensus 199 ~~~~~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~ 274 (482)
+.....|||+||||+++++..+||++|++|+++||||+++ .+.+.+.|+.|++||++|+||.+|..||.++..+..
T Consensus 12 ~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 12 LSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp TTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred cCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 3445789999999999999999999999999999999998 578899999999999999999999999999876654
No 6
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=1.4e-18 Score=141.48 Aligned_cols=70 Identities=33% Similarity=0.495 Sum_probs=65.5
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhh
Q 011584 202 EGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (482)
Q Consensus 202 ~~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (482)
...|||+||||+++++..+||++|++|+++||||+++ .+.+.+.|+.|++||++|+||.+|..||.++..
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 75 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSG 75 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCc
Confidence 3679999999999999999999999999999999998 578999999999999999999999999998753
No 7
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.74 E-value=1.9e-18 Score=144.91 Aligned_cols=69 Identities=30% Similarity=0.489 Sum_probs=64.6
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC-------hHHHHHHHHHHHHHHHhcChhHHHHHHHHhhh
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH-------PQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~-------~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (482)
..|||+||||+++++..+||+|||+|+++||||+++. ..+.+.|+.|++||++|+||.+|..||..+..
T Consensus 15 ~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 6899999999999999999999999999999999873 56889999999999999999999999998753
No 8
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=2.5e-18 Score=140.82 Aligned_cols=69 Identities=35% Similarity=0.451 Sum_probs=64.5
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCh--HHHHHHHHHHHHHHHhcChhHHHHHHHHhhh
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHP--QAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~--~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (482)
..|||+||||+++++.++||++|++|+++||||+++.. .+.+.|+.|++||++|+||.+|..||.++..
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 78 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSG 78 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 57999999999999999999999999999999999853 6889999999999999999999999998753
No 9
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=3.5e-18 Score=148.52 Aligned_cols=71 Identities=31% Similarity=0.411 Sum_probs=66.7
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKE 273 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~ 273 (482)
..|||+||||+++++..+||+|||+|+++||||+++ .+.+.+.|+.|++||++|+||.+|..||.++..+.
T Consensus 19 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 589999999999999999999999999999999998 67899999999999999999999999999886543
No 10
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.73 E-value=3.7e-18 Score=137.08 Aligned_cols=66 Identities=33% Similarity=0.569 Sum_probs=61.5
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (482)
..|||+||||+++++..+||++|++|+++||||+++.. .+.|+.|++||++|+||.+|..||.+|.
T Consensus 7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~--~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG--AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC--HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH--HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 68999999999999999999999999999999999643 6899999999999999999999999874
No 11
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.73 E-value=2.4e-18 Score=148.59 Aligned_cols=87 Identities=21% Similarity=0.303 Sum_probs=74.1
Q ss_pred CCCCcccccccCCCC-CHHHHHHHHHHHHHhhCCCCCCC----hHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHHHHH
Q 011584 202 EGDCPYDVIGANHNM-SAENIKKRYWKLSLFVHPDKCPH----PQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEEQE 276 (482)
Q Consensus 202 ~~~d~Y~VLGV~~~a-s~~eIKkAYrkLsl~~HPDk~~~----~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~~~ 276 (482)
...|||+||||++++ +..+||+|||+|+++||||+++. +.+.+.|+.|++||++|+||.+|..||.++......
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~~~~~- 91 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHPDQR- 91 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTTCH-
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccCchHH-
Confidence 478999999999999 99999999999999999999986 568999999999999999999999999988654421
Q ss_pred HHHHHHhhhhhhhhhhhhhc
Q 011584 277 KFKVELKAMQEGAQWRKSQG 296 (482)
Q Consensus 277 ~~~~e~~~~~~~~~wr~~fG 296 (482)
...+..+|+..|+
T Consensus 92 -------~~~~~~~~~~~~~ 104 (109)
T 2qsa_A 92 -------FYNYYQYYRLRAA 104 (109)
T ss_dssp -------HHHHHHHHHHC--
T ss_pred -------HHHHHHHHHHHhc
Confidence 1245677877765
No 12
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=4.2e-18 Score=144.80 Aligned_cols=71 Identities=23% Similarity=0.477 Sum_probs=65.9
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKE 273 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~ 273 (482)
..|||+||||+++++.++||++||+|+++||||++. .+.+.+.|+.|++||+||+||.+|..||..+...+
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~e 87 (99)
T 2yua_A 16 RTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSDE 87 (99)
T ss_dssp SSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCCHH
T ss_pred ccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccccc
Confidence 678999999999999999999999999999999997 67899999999999999999999999999765443
No 13
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=3.4e-18 Score=143.14 Aligned_cols=75 Identities=28% Similarity=0.484 Sum_probs=70.2
Q ss_pred chHHHHHHHHHHhccCCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHH
Q 011584 187 NEAERFEEVTRIMGVEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRK 263 (482)
Q Consensus 187 ~~~e~~~~v~ri~~~~~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~ 263 (482)
.+.++++.+.+++. ..|||+||||+++++..+||++||+|+++||||+++.+++.+.|+.|++||++|+|+.+|.
T Consensus 12 ~s~~~~~~~~~~~~--~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 12 FTKEQADAIRRIRN--SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp CCHHHHHHHHHHHT--CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCHHHHHHHHHHhc--CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCccccc
Confidence 57788888888876 7999999999999999999999999999999999999999999999999999999998875
No 14
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.71 E-value=1.2e-17 Score=142.46 Aligned_cols=71 Identities=30% Similarity=0.446 Sum_probs=64.1
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC--hHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHHH
Q 011584 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH--PQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEE 274 (482)
Q Consensus 204 ~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~--~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~ 274 (482)
.|||+||||+++++.++||++|++|+++||||+++. ..+.+.|+.|++||++|+||.+|..||.++..+..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~ 74 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLT 74 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC---
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 589999999999999999999999999999999985 45889999999999999999999999998865543
No 15
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=9.5e-18 Score=140.50 Aligned_cols=68 Identities=37% Similarity=0.523 Sum_probs=64.0
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC--hHHHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH--PQAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~--~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (482)
..|||+||||+++++..+||++|++|+++||||+++. ..+.+.|+.|++||++|+||.+|..||.++.
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~ 77 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGC 77 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCS
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 5799999999999999999999999999999999985 4789999999999999999999999999764
No 16
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.70 E-value=1.8e-17 Score=139.15 Aligned_cols=69 Identities=30% Similarity=0.466 Sum_probs=63.6
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKE 273 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~ 273 (482)
..|||+||||+++++.++||++|++|+++||||+++.. .+.|+.|++||++|+||.+|..||.++....
T Consensus 7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 75 (92)
T 2o37_A 7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD--TEKFKEISEAFEILNDPQKREIYDQYGLEAA 75 (92)
T ss_dssp CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC--HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHH
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh--HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHh
Confidence 67999999999999999999999999999999999643 5799999999999999999999999886554
No 17
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.68 E-value=6.1e-18 Score=144.70 Aligned_cols=71 Identities=25% Similarity=0.448 Sum_probs=66.3
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKE 273 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~ 273 (482)
..|||+||||+++++.++||++||+|+++||||+++ .+.+.+.|+.|++||++|+||.+|..||.++..+.
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 73 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF 73 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhh
Confidence 479999999999999999999999999999999998 47789999999999999999999999999887653
No 18
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.63 E-value=2.1e-16 Score=148.61 Aligned_cols=70 Identities=34% Similarity=0.601 Sum_probs=65.8
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHH
Q 011584 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKE 273 (482)
Q Consensus 204 ~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~ 273 (482)
.|||+||||+++|+.++||+|||+|+++||||+++ .+.+.+.|+.|++||++|+||.+|+.||.++..+.
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~ 72 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGL 72 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccc
Confidence 58999999999999999999999999999999996 67899999999999999999999999999886553
No 19
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.62 E-value=2.8e-16 Score=143.53 Aligned_cols=71 Identities=28% Similarity=0.465 Sum_probs=64.6
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCh-------HHHHHHHHHHHHHHHhcChhHHHHHHHHhhhH
Q 011584 202 EGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHP-------QAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (482)
Q Consensus 202 ~~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~-------~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (482)
...|||+||||+++++.++||+|||+|+++||||+++.. .+.+.|+.|++||++|+||.+|+.||..+...
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~~ 85 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCED 85 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHHH
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcchh
Confidence 357999999999999999999999999999999999854 36799999999999999999999999977543
No 20
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.59 E-value=7.6e-16 Score=143.74 Aligned_cols=68 Identities=19% Similarity=0.335 Sum_probs=61.8
Q ss_pred CCCcccccccCCCCC--HHHHHHHHHHHHHhhCCCCCCChH------HHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 011584 203 GDCPYDVIGANHNMS--AENIKKRYWKLSLFVHPDKCPHPQ------AHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as--~~eIKkAYrkLsl~~HPDk~~~~~------a~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (482)
..|||+||||+++++ ..+||++||+|+++||||+++... +.+.|..|++||++|+||.+|..||..+.
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 78 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQ 78 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHcc
Confidence 579999999999988 999999999999999999988542 67899999999999999999999998654
No 21
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.57 E-value=1.5e-15 Score=141.45 Aligned_cols=66 Identities=21% Similarity=0.298 Sum_probs=60.6
Q ss_pred CcccccccCCCC--CHHHHHHHHHHHHHhhCCCCCCCh------HHHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 011584 205 CPYDVIGANHNM--SAENIKKRYWKLSLFVHPDKCPHP------QAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (482)
Q Consensus 205 d~Y~VLGV~~~a--s~~eIKkAYrkLsl~~HPDk~~~~------~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (482)
|||+||||++++ +..+||++||+|+++||||+++.. .+.+.|..|++||+||+||.+|+.||..+.
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 799999999999 999999999999999999998853 256799999999999999999999998653
No 22
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.56 E-value=2.3e-16 Score=160.72 Aligned_cols=69 Identities=25% Similarity=0.373 Sum_probs=0.0
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhh
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (482)
..|||+||||+++|+.++||+|||+|+++||||+|+.+.|.++|+.|++||++|+||.+|+.||.++..
T Consensus 27 ~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 27 LKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp ---------------------------------------------------------------------
T ss_pred ccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 579999999999999999999999999999999999888999999999999999999999999998543
No 23
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.53 E-value=2.4e-16 Score=137.86 Aligned_cols=64 Identities=22% Similarity=0.252 Sum_probs=59.2
Q ss_pred CCCcccccccCCCCCH--HHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHh
Q 011584 203 GDCPYDVIGANHNMSA--ENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKI 269 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~--~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~ 269 (482)
..+||+||||+++++. .+||+|||+|+++||||+++. .++|+.|++||+||+||.+|+.||.++
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~ 72 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFG 72 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhcc
Confidence 3579999999999999 999999999999999999875 579999999999999999999999654
No 24
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.52 E-value=6.4e-15 Score=141.14 Aligned_cols=67 Identities=22% Similarity=0.347 Sum_probs=60.5
Q ss_pred CCCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCCh------HHHHHHHHHHHHHHHhcChhHHHHHHHHh
Q 011584 203 GDCPYDVIGANHN--MSAENIKKRYWKLSLFVHPDKCPHP------QAHQAFIKLNKAFKELQDPEKRKALDEKI 269 (482)
Q Consensus 203 ~~d~Y~VLGV~~~--as~~eIKkAYrkLsl~~HPDk~~~~------~a~e~F~~I~~AY~vLsDp~kR~~YD~~~ 269 (482)
..|||+||||+++ ++..+||++||+|+++||||+++.. .+.+.|+.|++||+||+||.+|+.||..+
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l 116 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKL 116 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHh
Confidence 5799999999986 7899999999999999999998743 25678999999999999999999999754
No 25
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.51 E-value=3e-15 Score=125.13 Aligned_cols=59 Identities=24% Similarity=0.285 Sum_probs=54.6
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC--hHHHHHHHHHHHHHHHhcChhHH
Q 011584 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH--PQAHQAFIKLNKAFKELQDPEKR 262 (482)
Q Consensus 204 ~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~--~~a~e~F~~I~~AY~vLsDp~kR 262 (482)
.++|+||||+++|+.++||+|||+|+++||||+++. ..+.+.|+.|++||++|+|...|
T Consensus 16 ~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 578999999999999999999999999999999986 35899999999999999987665
No 26
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.50 E-value=1.2e-15 Score=142.39 Aligned_cols=65 Identities=22% Similarity=0.236 Sum_probs=57.7
Q ss_pred CCCcccccccCCCCC--HHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 011584 203 GDCPYDVIGANHNMS--AENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as--~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (482)
..|||+||||+++|+ .++||+|||++++++|||++++ .++|+.|++||++|+||.+|+.||.++.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~---~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C---CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 358999999999998 6999999999999999999865 4799999999999999999999999875
No 27
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.50 E-value=4.2e-15 Score=121.65 Aligned_cols=59 Identities=17% Similarity=0.276 Sum_probs=54.5
Q ss_pred CCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHH
Q 011584 204 DCPYDVIGANHN--MSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKAL 265 (482)
Q Consensus 204 ~d~Y~VLGV~~~--as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~Y 265 (482)
.++|+||||+++ ++..+||+|||+|+++||||++.. .+.|+.|++||++|+|+.+|..+
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~---~~~f~~i~~AYe~L~~~~~r~~~ 71 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS---HALMQELNSLWGTFKTEVYNLRM 71 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC---HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHHhhHHHHHHH
Confidence 468999999999 999999999999999999999854 58999999999999999998874
No 28
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.50 E-value=2.9e-15 Score=140.75 Aligned_cols=63 Identities=30% Similarity=0.554 Sum_probs=58.6
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChH----HHHHHHHHHHHHHHhcChhHHHHH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQ----AHQAFIKLNKAFKELQDPEKRKAL 265 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~----a~e~F~~I~~AY~vLsDp~kR~~Y 265 (482)
..|||+||||+++|+..+||+|||+|+++|||||++... |.+.|+.|++||++|+|+.+|+.|
T Consensus 116 ~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 469999999999999999999999999999999997543 889999999999999999999876
No 29
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.48 E-value=1.3e-14 Score=136.39 Aligned_cols=66 Identities=23% Similarity=0.373 Sum_probs=60.6
Q ss_pred CCCCccccc------ccCC-CCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHHHHHHHHh
Q 011584 202 EGDCPYDVI------GANH-NMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKI 269 (482)
Q Consensus 202 ~~~d~Y~VL------GV~~-~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~ 269 (482)
...|||+|| |+++ +++..+||++||+|+++||||+++. +.+.|+.|++||++|+||.+|..||..+
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 367999999 4665 8999999999999999999999976 7789999999999999999999999976
No 30
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.48 E-value=9.2e-15 Score=123.22 Aligned_cols=55 Identities=31% Similarity=0.529 Sum_probs=51.0
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCh----HHHHHHHHHHHHHHHhcC
Q 011584 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHP----QAHQAFIKLNKAFKELQD 258 (482)
Q Consensus 204 ~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~----~a~e~F~~I~~AY~vLsD 258 (482)
.++|++|||++.|+..+||+|||+++++|||||++.. .|++.|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 5899999999999999999999999999999999743 388999999999999975
No 31
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.47 E-value=7.3e-15 Score=126.82 Aligned_cols=58 Identities=22% Similarity=0.326 Sum_probs=52.4
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCh--------HHHHHHHHHHHHHHHhcChh
Q 011584 202 EGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHP--------QAHQAFIKLNKAFKELQDPE 260 (482)
Q Consensus 202 ~~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~--------~a~e~F~~I~~AY~vLsDp~ 260 (482)
...|||.|||++. |+..+||+|||+++++|||||++.+ .|+++|+.|++||++|+|+.
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 3579999999996 9999999999999999999998632 36899999999999999985
No 32
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.40 E-value=2.9e-14 Score=114.27 Aligned_cols=56 Identities=20% Similarity=0.220 Sum_probs=50.6
Q ss_pred CCcccccccCC-CCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcChhHH
Q 011584 204 DCPYDVIGANH-NMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKR 262 (482)
Q Consensus 204 ~d~Y~VLGV~~-~as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsDp~kR 262 (482)
.++|+||||++ +++.++||++||+|+++||||++. ..+.|+.|++||++|+++..|
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g---~~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG---SPFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC---CHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC---CHHHHHHHHHHHHHHhhhhhc
Confidence 47899999999 799999999999999999999974 457999999999999987654
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.38 E-value=3.7e-14 Score=157.41 Aligned_cols=74 Identities=34% Similarity=0.591 Sum_probs=40.8
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHhcChhHHHHHHHHhhhHHHH
Q 011584 202 EGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEEQ 275 (482)
Q Consensus 202 ~~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~-~~~a~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~~ 275 (482)
...|||+||||+++|+.++||+|||+|+++||||+++ .+.+.+.|+.|++||++|+||.+|+.||.++..+...
T Consensus 19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~ 93 (780)
T 3apo_A 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 93 (780)
T ss_dssp ----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccccccc
Confidence 3689999999999999999999999999999999996 6778999999999999999999999999998766543
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.79 E-value=3e-09 Score=106.36 Aligned_cols=65 Identities=35% Similarity=0.564 Sum_probs=56.7
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCChH----HHHHHHHHHHHHHHhcChhHHHHHHH
Q 011584 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQ----AHQAFIKLNKAFKELQDPEKRKALDE 267 (482)
Q Consensus 203 ~~d~Y~VLGV~~~as~~eIKkAYrkLsl~~HPDk~~~~~----a~e~F~~I~~AY~vLsDp~kR~~YD~ 267 (482)
..++|.+||+...++..+|+++|+++++.+|||+.+.+. +.+.|+.|++||++|+|+.+|..||.
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 469999999999999999999999999999999998654 88999999999999999999999996
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.44 E-value=9e-08 Score=75.55 Aligned_cols=51 Identities=14% Similarity=0.148 Sum_probs=45.8
Q ss_pred CcccccccCCC---CCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHhcC
Q 011584 205 CPYDVIGANHN---MSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQD 258 (482)
Q Consensus 205 d~Y~VLGV~~~---as~~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~vLsD 258 (482)
..|.||||+++ ++.++|+++||+|...+|||+. +....+.+|+.|+++|..
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG---GS~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG---GSFYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT---CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHHH
Confidence 35889999999 9999999999999999999996 566788999999999863
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=86.07 E-value=0.69 Score=50.25 Aligned_cols=52 Identities=8% Similarity=0.089 Sum_probs=40.2
Q ss_pred HHhccCCCCcccccccCCCCCH--HHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHH
Q 011584 197 RIMGVEGDCPYDVIGANHNMSA--ENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKE 255 (482)
Q Consensus 197 ri~~~~~~d~Y~VLGV~~~as~--~eIKkAYrkLsl~~HPDk~~~~~a~e~F~~I~~AY~v 255 (482)
..+.....+||.+||++.+... .+|+++||+|++..+++ .+++..|..|+.|
T Consensus 622 ~~~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 622 DWLKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV 675 (681)
T ss_dssp HHHTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred HHHHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence 3344557789999999766655 67999999999976665 3688888888775
No 37
>2krc_A DNA-directed RNA polymerase subunit delta; delta subunit, GRAM-positive bacteria, nucleotidyltransferase, transcription, transferase; NMR {Bacillus subtilis}
Probab=34.00 E-value=47 Score=27.71 Aligned_cols=62 Identities=18% Similarity=0.414 Sum_probs=44.6
Q ss_pred CChHHHHHHHHHhC--CcchhhHHHHHHHhhCCceeeecCCCChhHHHHHHHHHHhcCcccc----CCcceeecCC
Q 011584 1 MSPEEVVRDVLTQF--PNVGNDLKTLLQMIDDGQAVDIRGISEKSLSKHLRKLFLSLDLKES----KDRVFLRRPT 70 (482)
Q Consensus 1 ~~~~~~~~~~l~~~--p~~~~~~~~ll~~id~G~~~~i~Gi~~~~l~~~l~~lf~~l~l~~~----~~g~~~l~~~ 70 (482)
||--+|+.+||.+. |-- +..|+.-| +.+.|++++.++..|..|+-.|++--+ |+|.|+|..-
T Consensus 13 ~SmiDvAy~iL~~~~~~~~---F~dL~~eV-----~~~~~~s~ee~~~~iaqfYTdLn~DGRFi~lGen~WgLr~w 80 (99)
T 2krc_A 13 MALVEIAHELFEEHKKPVP---FQELLNEI-----ASLLGVKKEELGDRIAQFYTDLNIDGRFLALSDQTWGLRSW 80 (99)
T ss_dssp SCHHHHHHHHHHHHCSCEE---HHHHHHHH-----HHHHTSCGGGGTHHHHHHHHHHHTCSSCEESSSSEEECGGG
T ss_pred CCHHHHHHHHHHHcCCccc---HHHHHHHH-----HHHhCCCHHHHHHHHHHHHHHHhccCCeeECCCCceecCcc
Confidence 45567899999875 333 33333332 223499999999999999999988744 9999998763
No 38
>1e91_A Paired amphipathic helix protein SIN3B; eukaryotic transcriptional regulation, SIN3, PAH domains, protein-protein interactions; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1pd7_A
Probab=24.81 E-value=37 Score=27.39 Aligned_cols=47 Identities=17% Similarity=0.390 Sum_probs=36.5
Q ss_pred HHHHHHhCCcchhhHHHHHHHhhCCceeeecC-----CCChhHHHHHHHHHHh
Q 011584 7 VRDVLTQFPNVGNDLKTLLQMIDDGQAVDIRG-----ISEKSLSKHLRKLFLS 54 (482)
Q Consensus 7 ~~~~l~~~p~~~~~~~~ll~~id~G~~~~i~G-----i~~~~l~~~l~~lf~~ 54 (482)
|+.-+...|++=+.+.++|.+.-.|+ +++.| +|...+..+++.||..
T Consensus 17 VK~rF~~~p~~Y~~FL~il~~yk~~~-~d~~~~~~~~~s~~eV~~~V~~Lf~~ 68 (85)
T 1e91_A 17 IKTRFLDHPEIYRSFLEILHTYQKEQ-LHTKGRPFRGMSEEEVFTEVANLFRG 68 (85)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHTT-CSSSCCCSSCCCHHHHHHHHHHHTSS
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHcc-ccccccccccCcHHHHHHHHHHHHcc
Confidence 34444446888899999999998876 56555 7888999999999953
Done!