Query 011589
Match_columns 482
No_of_seqs 233 out of 1174
Neff 5.0
Searched_HMMs 46136
Date Fri Mar 29 03:02:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011589.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011589hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1605 TFIIF-interacting CTD 100.0 3E-48 6.5E-53 384.0 13.9 180 295-474 81-262 (262)
2 TIGR02251 HIF-SF_euk Dullard-l 100.0 1.5E-40 3.3E-45 307.2 17.9 161 303-463 1-162 (162)
3 PF03031 NIF: NLI interacting 100.0 1.1E-38 2.5E-43 289.7 16.4 158 304-465 1-159 (159)
4 TIGR02245 HAD_IIID1 HAD-superf 100.0 1.6E-36 3.5E-41 289.7 15.6 159 299-473 17-193 (195)
5 TIGR02250 FCP1_euk FCP1-like p 100.0 3.4E-31 7.3E-36 244.6 13.5 138 300-440 3-154 (156)
6 KOG2832 TFIIF-interacting CTD 100.0 4E-31 8.6E-36 268.8 10.3 158 297-470 183-342 (393)
7 COG5190 FCP1 TFIIF-interacting 99.9 1.5E-28 3.3E-33 254.7 8.3 177 297-474 206-384 (390)
8 smart00577 CPDc catalytic doma 99.9 1.8E-26 3.9E-31 209.5 15.4 145 302-446 1-148 (148)
9 KOG0323 TFIIF-interacting CTD 99.8 1.2E-19 2.6E-24 197.7 10.8 137 301-440 144-297 (635)
10 TIGR01685 MDP-1 magnesium-depe 98.4 5.1E-07 1.1E-11 85.5 7.8 137 304-440 3-157 (174)
11 TIGR01681 HAD-SF-IIIC HAD-supe 98.4 2.4E-07 5.2E-12 82.6 3.4 111 304-426 1-121 (128)
12 COG5190 FCP1 TFIIF-interacting 98.4 2.2E-07 4.8E-12 97.7 3.4 136 300-438 23-172 (390)
13 COG4996 Predicted phosphatase 98.3 2.4E-06 5.1E-11 78.1 8.0 138 305-448 2-154 (164)
14 cd01427 HAD_like Haloacid deha 98.1 2E-06 4.2E-11 72.6 3.8 108 305-428 1-128 (139)
15 PRK13288 pyrophosphatase PpaX; 98.1 1.2E-06 2.6E-11 83.1 2.5 95 342-437 81-179 (214)
16 PRK14988 GMP/IMP nucleotidase; 98.1 1.2E-06 2.6E-11 84.8 1.1 93 342-435 92-188 (224)
17 TIGR01662 HAD-SF-IIIA HAD-supe 98.0 5.1E-06 1.1E-10 73.1 4.3 114 304-435 1-126 (132)
18 TIGR01684 viral_ppase viral ph 98.0 2.2E-05 4.8E-10 80.2 8.1 123 300-445 123-281 (301)
19 PHA03398 viral phosphatase sup 97.9 4.3E-05 9.3E-10 78.2 9.3 123 300-445 125-283 (303)
20 PRK13225 phosphoglycolate phos 97.9 4.4E-06 9.6E-11 83.9 1.0 94 342-436 141-235 (273)
21 TIGR00213 GmhB_yaeD D,D-heptos 97.8 3.4E-05 7.3E-10 71.9 5.9 115 304-436 2-146 (176)
22 TIGR01656 Histidinol-ppas hist 97.8 1.8E-05 4E-10 71.7 4.0 116 304-435 1-140 (147)
23 COG0637 Predicted phosphatase/ 97.8 5.5E-06 1.2E-10 80.4 0.4 99 342-441 85-187 (221)
24 TIGR01261 hisB_Nterm histidino 97.8 4.8E-05 1E-09 70.9 6.5 122 304-440 2-147 (161)
25 PF12689 Acid_PPase: Acid Phos 97.8 6.7E-05 1.5E-09 71.0 7.2 117 303-426 3-137 (169)
26 TIGR00338 serB phosphoserine p 97.7 7.3E-06 1.6E-10 77.7 0.5 94 342-436 84-191 (219)
27 TIGR01686 FkbH FkbH-like domai 97.7 4.7E-05 1E-09 77.8 6.1 107 303-426 3-116 (320)
28 PRK08942 D,D-heptose 1,7-bisph 97.7 7.8E-05 1.7E-09 69.5 6.3 116 303-435 3-142 (181)
29 PHA02530 pseT polynucleotide k 97.6 4.5E-05 9.7E-10 76.1 3.6 127 301-438 156-294 (300)
30 PF13419 HAD_2: Haloacid dehal 97.4 0.00011 2.3E-09 65.2 3.7 94 340-434 74-171 (176)
31 TIGR01672 AphA HAD superfamily 97.4 0.00018 3.9E-09 71.4 4.9 131 300-435 60-206 (237)
32 TIGR01664 DNA-3'-Pase DNA 3'-p 97.3 0.00052 1.1E-08 64.1 6.4 107 303-423 13-137 (166)
33 TIGR02253 CTE7 HAD superfamily 97.2 0.00028 6.1E-09 66.8 3.7 94 341-435 92-190 (221)
34 PRK06769 hypothetical protein; 97.2 0.00042 9.1E-09 64.8 4.5 116 304-437 5-134 (173)
35 TIGR01668 YqeG_hyp_ppase HAD s 97.2 0.00058 1.3E-08 63.7 5.2 107 301-436 23-132 (170)
36 PRK13582 thrH phosphoserine ph 97.2 9.5E-05 2.1E-09 69.3 -0.0 95 341-436 66-167 (205)
37 TIGR01509 HAD-SF-IA-v3 haloaci 97.2 0.00044 9.6E-09 62.9 4.3 92 342-435 84-179 (183)
38 PF05152 DUF705: Protein of un 97.1 0.0015 3.3E-08 66.6 8.2 71 301-393 120-192 (297)
39 TIGR01489 DKMTPPase-SF 2,3-dik 97.1 0.00046 1E-08 63.1 4.0 86 342-428 71-177 (188)
40 PLN03243 haloacid dehalogenase 97.1 0.00051 1.1E-08 68.6 4.5 97 342-439 108-208 (260)
41 PRK05446 imidazole glycerol-ph 97.1 0.0012 2.6E-08 69.2 7.5 120 302-436 1-144 (354)
42 TIGR02254 YjjG/YfnB HAD superf 97.1 0.00041 8.8E-09 65.4 3.5 94 342-436 96-194 (224)
43 PLN02770 haloacid dehalogenase 97.1 0.00049 1.1E-08 67.5 4.2 96 342-438 107-206 (248)
44 TIGR01454 AHBA_synth_RP 3-amin 97.1 0.00062 1.3E-08 64.2 4.5 96 341-437 73-172 (205)
45 TIGR01428 HAD_type_II 2-haloal 97.0 0.00052 1.1E-08 64.2 3.8 93 342-435 91-187 (198)
46 TIGR01449 PGP_bact 2-phosphogl 97.0 0.00056 1.2E-08 64.2 3.8 96 342-438 84-183 (213)
47 TIGR01993 Pyr-5-nucltdase pyri 97.0 0.00043 9.3E-09 64.2 2.5 91 342-435 83-180 (184)
48 PRK11009 aphA acid phosphatase 97.0 0.0022 4.7E-08 63.8 7.4 130 300-435 60-206 (237)
49 COG0546 Gph Predicted phosphat 96.9 0.00057 1.2E-08 65.9 3.2 93 342-435 88-184 (220)
50 KOG3109 Haloacid dehalogenase- 96.9 0.00056 1.2E-08 67.5 2.6 86 342-429 99-194 (244)
51 PRK09449 dUMP phosphatase; Pro 96.8 0.00093 2E-08 63.6 3.7 92 342-434 94-190 (224)
52 TIGR02137 HSK-PSP phosphoserin 96.8 0.00071 1.5E-08 65.3 2.8 49 342-391 67-115 (203)
53 PRK09456 ?-D-glucose-1-phospha 96.8 0.00088 1.9E-08 63.2 3.2 100 342-441 83-186 (199)
54 TIGR01689 EcbF-BcbF capsule bi 96.8 0.0033 7.3E-08 56.9 6.7 84 304-405 2-99 (126)
55 PRK10826 2-deoxyglucose-6-phos 96.8 0.0015 3.2E-08 62.5 4.2 99 342-441 91-193 (222)
56 TIGR01670 YrbI-phosphatas 3-de 96.8 0.0017 3.6E-08 59.7 4.4 111 304-435 2-114 (154)
57 TIGR02009 PGMB-YQAB-SF beta-ph 96.7 0.00085 1.8E-08 61.5 2.4 92 342-436 87-182 (185)
58 PRK10725 fructose-1-P/6-phosph 96.7 0.00096 2.1E-08 61.5 2.8 93 342-436 87-182 (188)
59 PLN02575 haloacid dehalogenase 96.7 0.0018 3.9E-08 68.6 4.6 97 342-439 215-315 (381)
60 PLN02954 phosphoserine phospha 96.6 0.00078 1.7E-08 64.1 1.4 92 342-435 83-191 (224)
61 TIGR01422 phosphonatase phosph 96.6 0.0024 5.1E-08 62.4 4.4 98 342-439 98-200 (253)
62 PRK11587 putative phosphatase; 96.6 0.0037 8.1E-08 59.8 5.5 97 341-439 81-181 (218)
63 TIGR01663 PNK-3'Pase polynucle 96.5 0.0054 1.2E-07 67.5 6.8 109 301-423 166-294 (526)
64 PRK13226 phosphoglycolate phos 96.4 0.0032 7E-08 60.9 4.4 95 341-436 93-191 (229)
65 PRK13222 phosphoglycolate phos 96.4 0.0038 8.2E-08 59.1 4.3 92 342-434 92-187 (226)
66 PRK11133 serB phosphoserine ph 96.2 0.0015 3.3E-08 67.5 0.7 95 342-437 180-288 (322)
67 TIGR01491 HAD-SF-IB-PSPlk HAD- 96.2 0.0087 1.9E-07 55.4 5.5 94 342-436 79-186 (201)
68 PRK10563 6-phosphogluconate ph 96.2 0.0027 5.7E-08 60.5 2.1 95 342-439 87-185 (221)
69 COG1011 Predicted hydrolase (H 96.2 0.007 1.5E-07 57.2 4.9 84 342-426 98-184 (229)
70 PRK13478 phosphonoacetaldehyde 96.1 0.0079 1.7E-07 59.5 5.2 97 342-438 100-201 (267)
71 PRK13223 phosphoglycolate phos 96.1 0.0059 1.3E-07 61.1 4.2 93 342-435 100-196 (272)
72 TIGR03351 PhnX-like phosphonat 96.1 0.0057 1.2E-07 58.1 3.9 95 342-436 86-186 (220)
73 PLN02779 haloacid dehalogenase 96.0 0.0072 1.6E-07 61.1 4.6 97 342-439 143-245 (286)
74 TIGR02247 HAD-1A3-hyp Epoxide 96.0 0.0027 5.9E-08 60.0 1.2 98 341-439 92-195 (211)
75 TIGR02252 DREG-2 REG-2-like, H 96.0 0.006 1.3E-07 57.2 3.4 91 342-434 104-199 (203)
76 TIGR01533 lipo_e_P4 5'-nucleot 95.9 0.0062 1.3E-07 61.6 3.5 93 301-394 73-173 (266)
77 TIGR01990 bPGM beta-phosphoglu 95.9 0.0059 1.3E-07 55.9 3.0 92 342-436 86-181 (185)
78 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.9 0.013 2.7E-07 57.4 5.4 95 303-423 8-105 (242)
79 PLN02940 riboflavin kinase 95.8 0.0062 1.3E-07 64.2 3.2 95 342-437 92-191 (382)
80 TIGR01548 HAD-SF-IA-hyp1 haloa 95.8 0.017 3.8E-07 54.2 5.6 81 344-426 107-191 (197)
81 PRK08238 hypothetical protein; 95.8 0.011 2.3E-07 64.5 4.7 90 342-437 71-165 (479)
82 TIGR01549 HAD-SF-IA-v1 haloaci 95.7 0.02 4.4E-07 51.2 5.7 82 341-426 62-147 (154)
83 PHA02597 30.2 hypothetical pro 95.7 0.0044 9.6E-08 58.0 1.5 96 342-439 73-173 (197)
84 PRK09484 3-deoxy-D-manno-octul 95.7 0.014 3E-07 55.1 4.8 114 302-437 20-136 (183)
85 COG0560 SerB Phosphoserine pho 95.6 0.037 8.1E-07 54.0 7.3 95 342-437 76-186 (212)
86 TIGR01691 enolase-ppase 2,3-di 95.5 0.012 2.6E-07 57.8 3.7 94 342-436 94-192 (220)
87 PLN02811 hydrolase 95.5 0.0089 1.9E-07 57.3 2.6 97 342-439 77-183 (220)
88 PLN02919 haloacid dehalogenase 95.0 0.033 7.1E-07 66.1 6.0 96 344-439 162-261 (1057)
89 PRK09552 mtnX 2-hydroxy-3-keto 95.0 0.052 1.1E-06 52.1 6.3 96 342-437 73-184 (219)
90 TIGR01493 HAD-SF-IA-v2 Haloaci 94.5 0.0096 2.1E-07 54.4 -0.1 77 342-425 89-168 (175)
91 PRK00192 mannosyl-3-phosphogly 94.5 0.11 2.3E-06 51.7 7.2 58 303-383 4-62 (273)
92 COG0561 Cof Predicted hydrolas 94.4 0.11 2.5E-06 50.8 7.2 58 303-383 3-61 (264)
93 PTZ00445 p36-lilke protein; Pr 94.3 0.026 5.5E-07 55.8 2.2 128 300-440 40-205 (219)
94 PRK06698 bifunctional 5'-methy 94.3 0.043 9.4E-07 58.9 4.1 92 342-436 329-423 (459)
95 COG0241 HisB Histidinol phosph 94.2 0.051 1.1E-06 52.3 4.1 126 303-442 5-154 (181)
96 TIGR01544 HAD-SF-IE haloacid d 94.1 0.1 2.2E-06 53.4 6.1 104 341-445 119-247 (277)
97 PF08282 Hydrolase_3: haloacid 94.0 0.11 2.4E-06 48.8 5.8 54 306-382 1-55 (254)
98 TIGR03333 salvage_mtnX 2-hydro 93.9 0.1 2.2E-06 50.0 5.5 94 341-434 68-177 (214)
99 PF08645 PNK3P: Polynucleotide 93.8 0.1 2.2E-06 48.6 5.2 106 304-424 1-129 (159)
100 PF13344 Hydrolase_6: Haloacid 93.8 0.13 2.7E-06 44.5 5.3 50 306-379 1-51 (101)
101 TIGR02726 phenyl_P_delta pheny 93.6 0.11 2.5E-06 49.0 5.1 115 303-438 7-123 (169)
102 PRK03669 mannosyl-3-phosphogly 93.6 0.2 4.4E-06 49.7 7.1 59 301-382 5-64 (271)
103 TIGR01487 SPP-like sucrose-pho 93.5 0.2 4.4E-06 47.6 6.7 57 304-383 2-59 (215)
104 TIGR02461 osmo_MPG_phos mannos 93.1 0.22 4.8E-06 48.6 6.5 54 305-382 1-55 (225)
105 PRK10513 sugar phosphate phosp 93.0 0.25 5.5E-06 48.4 6.7 57 303-382 3-60 (270)
106 PRK01158 phosphoglycolate phos 92.8 0.38 8.1E-06 45.9 7.4 57 304-383 4-61 (230)
107 TIGR00099 Cof-subfamily Cof su 92.7 0.27 5.8E-06 48.0 6.4 56 305-383 1-57 (256)
108 PRK10530 pyridoxal phosphate ( 92.7 0.34 7.3E-06 47.3 7.1 58 303-383 3-61 (272)
109 TIGR02463 MPGP_rel mannosyl-3- 92.2 0.47 1E-05 45.2 7.2 54 306-382 2-56 (221)
110 PRK10976 putative hydrolase; P 91.8 0.45 9.6E-06 46.7 6.7 57 304-383 3-60 (266)
111 PRK15126 thiamin pyrimidine py 91.7 0.46 1E-05 46.9 6.8 57 304-383 3-60 (272)
112 TIGR01486 HAD-SF-IIB-MPGP mann 91.6 0.42 9E-06 46.9 6.3 55 305-382 1-56 (256)
113 TIGR01484 HAD-SF-IIB HAD-super 91.5 0.37 8.1E-06 45.2 5.6 54 305-380 1-55 (204)
114 smart00775 LNS2 LNS2 domain. T 91.2 0.5 1.1E-05 43.9 6.1 62 305-379 1-67 (157)
115 KOG2914 Predicted haloacid-hal 91.1 0.046 9.9E-07 54.1 -1.0 95 341-436 90-192 (222)
116 TIGR01488 HAD-SF-IB Haloacid D 91.1 0.61 1.3E-05 42.3 6.5 49 342-391 72-121 (177)
117 PRK10748 flavin mononucleotide 91.0 0.13 2.8E-06 50.2 2.0 89 342-436 112-204 (238)
118 PF09419 PGP_phosphatase: Mito 90.9 0.58 1.3E-05 44.6 6.2 96 299-424 37-147 (168)
119 TIGR01482 SPP-subfamily Sucros 90.3 0.73 1.6E-05 43.7 6.4 53 306-381 1-54 (225)
120 COG2179 Predicted hydrolase of 90.3 0.29 6.4E-06 46.8 3.6 118 295-441 20-142 (175)
121 TIGR01456 CECR5 HAD-superfamil 90.1 0.51 1.1E-05 48.5 5.6 53 304-380 1-62 (321)
122 PRK10444 UMP phosphatase; Prov 90.1 0.47 1E-05 47.3 5.1 54 304-381 2-56 (248)
123 PRK10187 trehalose-6-phosphate 90.0 0.67 1.5E-05 46.5 6.2 59 303-379 14-74 (266)
124 COG3882 FkbH Predicted enzyme 89.8 0.45 9.7E-06 52.2 4.9 129 300-442 219-357 (574)
125 PLN02645 phosphoglycolate phos 89.5 0.46 1E-05 48.6 4.7 53 303-379 28-81 (311)
126 PRK12702 mannosyl-3-phosphogly 89.4 0.96 2.1E-05 46.9 6.8 57 304-383 2-59 (302)
127 PF06888 Put_Phosphatase: Puta 89.0 0.57 1.2E-05 46.8 4.8 49 342-391 70-121 (234)
128 PF11019 DUF2608: Protein of u 88.6 0.36 7.7E-06 48.5 3.0 100 341-440 79-209 (252)
129 PTZ00174 phosphomannomutase; P 88.4 1 2.2E-05 44.4 6.0 52 303-377 5-57 (247)
130 TIGR01458 HAD-SF-IIA-hyp3 HAD- 88.3 0.61 1.3E-05 46.4 4.5 47 304-370 2-49 (257)
131 TIGR01452 PGP_euk phosphoglyco 88.1 0.76 1.6E-05 46.0 5.0 41 304-368 3-44 (279)
132 PLN02423 phosphomannomutase 87.9 1.2 2.6E-05 44.1 6.2 55 301-381 5-59 (245)
133 TIGR01485 SPP_plant-cyano sucr 87.8 1 2.2E-05 44.1 5.6 60 303-382 1-61 (249)
134 TIGR01490 HAD-SF-IB-hyp1 HAD-s 87.7 0.69 1.5E-05 43.2 4.2 84 342-426 86-184 (202)
135 COG2503 Predicted secreted aci 85.9 0.64 1.4E-05 47.0 3.0 79 300-379 76-160 (274)
136 PRK14502 bifunctional mannosyl 85.0 3.1 6.7E-05 47.7 8.2 60 300-382 413-473 (694)
137 COG4359 Uncharacterized conser 84.3 2.3 5E-05 41.6 5.9 42 342-383 72-114 (220)
138 PLN03017 trehalose-phosphatase 84.1 1.7 3.7E-05 46.2 5.4 60 300-377 108-167 (366)
139 PLN02887 hydrolase family prot 83.8 2.6 5.5E-05 47.4 6.9 58 302-382 307-365 (580)
140 TIGR01457 HAD-SF-IIA-hyp2 HAD- 83.7 1.8 3.9E-05 42.8 5.1 52 305-380 3-58 (249)
141 PLN02151 trehalose-phosphatase 82.3 2.5 5.5E-05 44.8 5.8 60 300-377 95-154 (354)
142 PLN02580 trehalose-phosphatase 81.2 2.8 6.2E-05 44.8 5.8 61 300-378 116-176 (384)
143 TIGR01675 plant-AP plant acid 81.2 4.3 9.2E-05 40.6 6.7 93 300-393 74-172 (229)
144 TIGR01460 HAD-SF-IIA Haloacid 81.0 1.9 4.2E-05 42.2 4.1 50 306-379 1-55 (236)
145 COG0647 NagD Predicted sugar p 79.3 2.5 5.4E-05 43.1 4.4 53 303-379 8-61 (269)
146 TIGR00685 T6PP trehalose-phosp 79.0 1.9 4.1E-05 42.4 3.3 48 302-367 2-51 (244)
147 COG1877 OtsB Trehalose-6-phosp 78.8 4.1 8.8E-05 41.6 5.7 61 299-377 14-76 (266)
148 KOG3120 Predicted haloacid deh 78.4 1.1 2.4E-05 44.9 1.5 40 342-381 83-124 (256)
149 PF00702 Hydrolase: haloacid d 78.3 2.2 4.7E-05 39.5 3.4 81 340-424 124-206 (215)
150 TIGR01511 ATPase-IB1_Cu copper 78.0 3.5 7.7E-05 45.8 5.5 86 341-436 403-489 (562)
151 TIGR02244 HAD-IG-Ncltidse HAD 75.7 3.8 8.3E-05 43.2 4.7 53 339-391 180-240 (343)
152 PF06941 NT5C: 5' nucleotidase 75.6 2 4.3E-05 40.5 2.4 79 342-436 72-158 (191)
153 PRK10725 fructose-1-P/6-phosph 75.1 1.7 3.8E-05 39.9 1.8 16 303-318 5-20 (188)
154 PRK11587 putative phosphatase; 73.8 1.8 3.9E-05 41.4 1.6 15 304-318 4-18 (218)
155 PF03767 Acid_phosphat_B: HAD 72.3 3.4 7.4E-05 40.8 3.2 72 301-378 70-151 (229)
156 PHA02597 30.2 hypothetical pro 70.9 2.2 4.7E-05 39.9 1.4 15 304-318 3-17 (197)
157 PRK11590 hypothetical protein; 70.4 2.5 5.4E-05 40.5 1.7 39 342-380 94-134 (211)
158 TIGR01548 HAD-SF-IA-hyp1 haloa 69.9 2.1 4.5E-05 40.2 1.0 14 305-318 2-15 (197)
159 TIGR01993 Pyr-5-nucltdase pyri 68.8 2.7 5.9E-05 38.8 1.6 14 305-318 2-15 (184)
160 TIGR02253 CTE7 HAD superfamily 67.9 3 6.6E-05 39.3 1.7 15 304-318 3-17 (221)
161 PRK14501 putative bifunctional 67.8 9.5 0.00021 43.7 5.9 62 300-379 489-552 (726)
162 PRK11590 hypothetical protein; 67.4 8.1 0.00018 37.0 4.5 17 302-318 5-21 (211)
163 PF05116 S6PP: Sucrose-6F-phos 67.3 9.5 0.00021 37.8 5.1 54 303-380 2-57 (247)
164 TIGR03351 PhnX-like phosphonat 66.5 3.1 6.8E-05 39.4 1.5 15 304-318 2-16 (220)
165 TIGR02009 PGMB-YQAB-SF beta-ph 66.1 3.1 6.7E-05 37.9 1.3 15 304-318 2-16 (185)
166 PRK13226 phosphoglycolate phos 65.2 3.1 6.8E-05 40.2 1.2 16 303-318 12-27 (229)
167 TIGR01525 ATPase-IB_hvy heavy 65.1 9.8 0.00021 42.1 5.2 87 341-436 382-470 (556)
168 TIGR01422 phosphonatase phosph 64.4 3.9 8.5E-05 39.9 1.8 15 304-318 3-17 (253)
169 TIGR01545 YfhB_g-proteo haloac 64.2 15 0.00033 35.5 5.8 38 342-379 93-132 (210)
170 COG3769 Predicted hydrolase (H 64.0 21 0.00045 36.2 6.6 58 303-384 7-65 (274)
171 PRK10748 flavin mononucleotide 63.7 4 8.7E-05 39.8 1.7 16 303-318 10-25 (238)
172 TIGR02252 DREG-2 REG-2-like, H 63.7 3.6 7.7E-05 38.5 1.3 14 305-318 2-15 (203)
173 PLN03243 haloacid dehalogenase 63.5 4.4 9.5E-05 40.6 2.0 19 300-318 21-39 (260)
174 PLN02770 haloacid dehalogenase 63.3 4 8.8E-05 40.1 1.6 16 303-318 22-37 (248)
175 PRK13478 phosphonoacetaldehyde 63.1 4 8.6E-05 40.4 1.6 16 303-318 4-19 (267)
176 PRK13223 phosphoglycolate phos 62.8 4.4 9.5E-05 40.6 1.8 16 303-318 13-28 (272)
177 TIGR01549 HAD-SF-IA-v1 haloaci 62.3 3.3 7.2E-05 36.8 0.8 14 305-318 1-14 (154)
178 TIGR02471 sucr_syn_bact_C sucr 61.7 11 0.00023 36.5 4.3 53 305-381 1-53 (236)
179 TIGR01680 Veg_Stor_Prot vegeta 60.2 19 0.00041 37.1 5.8 91 302-393 100-197 (275)
180 TIGR01990 bPGM beta-phosphoglu 60.2 4.2 9.2E-05 37.0 1.1 14 305-318 1-14 (185)
181 TIGR01454 AHBA_synth_RP 3-amin 60.0 3.6 7.7E-05 38.7 0.6 13 306-318 1-13 (205)
182 PRK10826 2-deoxyglucose-6-phos 59.0 5.7 0.00012 37.9 1.8 17 302-318 6-22 (222)
183 PLN02779 haloacid dehalogenase 58.6 5.4 0.00012 40.4 1.6 18 301-318 38-55 (286)
184 TIGR01491 HAD-SF-IB-PSPlk HAD- 58.4 5.9 0.00013 36.5 1.7 16 303-318 4-19 (201)
185 TIGR01512 ATPase-IB2_Cd heavy 58.2 8.1 0.00017 42.7 3.0 88 340-436 359-448 (536)
186 PRK09449 dUMP phosphatase; Pro 57.9 5.1 0.00011 38.0 1.3 14 304-317 4-17 (224)
187 TIGR02254 YjjG/YfnB HAD superf 57.8 5.2 0.00011 37.5 1.3 15 304-318 2-16 (224)
188 TIGR01449 PGP_bact 2-phosphogl 57.8 4.1 8.9E-05 38.1 0.6 13 306-318 1-13 (213)
189 TIGR01428 HAD_type_II 2-haloal 57.3 5.5 0.00012 37.1 1.3 15 304-318 2-16 (198)
190 PRK13222 phosphoglycolate phos 56.8 5.5 0.00012 37.5 1.3 15 304-318 7-21 (226)
191 TIGR02247 HAD-1A3-hyp Epoxide 56.8 6.2 0.00013 37.2 1.6 15 304-318 3-17 (211)
192 TIGR01493 HAD-SF-IA-v2 Haloaci 56.7 5.4 0.00012 36.3 1.1 13 306-318 2-14 (175)
193 COG4502 5'(3')-deoxyribonucleo 56.5 25 0.00054 33.3 5.4 80 342-441 67-155 (180)
194 PF13419 HAD_2: Haloacid dehal 55.8 5.6 0.00012 35.0 1.1 13 306-318 1-13 (176)
195 PRK10563 6-phosphogluconate ph 54.9 6.7 0.00015 37.2 1.5 16 303-318 4-19 (221)
196 PF12710 HAD: haloacid dehalog 53.5 11 0.00024 34.3 2.7 47 344-390 86-138 (192)
197 KOG3085 Predicted hydrolase (H 52.3 8.8 0.00019 38.6 1.9 82 341-425 112-197 (237)
198 TIGR01509 HAD-SF-IA-v3 haloaci 51.6 6.7 0.00014 35.4 0.9 13 306-318 2-14 (183)
199 PF08235 LNS2: LNS2 (Lipin/Ned 51.1 36 0.00078 32.3 5.7 62 306-379 2-64 (157)
200 PF05822 UMPH-1: Pyrimidine 5' 47.9 20 0.00044 36.3 3.7 100 341-440 88-211 (246)
201 PF02358 Trehalose_PPase: Treh 47.7 27 0.00059 33.9 4.5 50 307-374 1-52 (235)
202 PLN02205 alpha,alpha-trehalose 45.9 35 0.00076 40.3 5.8 60 300-379 593-654 (854)
203 PLN03063 alpha,alpha-trehalose 44.7 37 0.00079 39.8 5.6 64 300-378 504-569 (797)
204 PRK06698 bifunctional 5'-methy 43.2 9.6 0.00021 41.1 0.6 15 304-318 242-256 (459)
205 TIGR02826 RNR_activ_nrdG3 anae 43.1 46 0.001 30.8 5.0 71 331-421 65-137 (147)
206 PLN02575 haloacid dehalogenase 41.7 14 0.0003 39.6 1.5 18 301-318 129-146 (381)
207 PF08484 Methyltransf_14: C-me 41.5 73 0.0016 30.0 6.2 66 344-440 53-120 (160)
208 PLN02382 probable sucrose-phos 41.2 71 0.0015 34.4 6.8 17 301-317 7-23 (413)
209 PLN02940 riboflavin kinase 40.0 18 0.00038 38.4 2.0 16 303-318 11-26 (382)
210 PRK09552 mtnX 2-hydroxy-3-keto 39.7 16 0.00034 35.0 1.5 16 303-318 3-18 (219)
211 COG1011 Predicted hydrolase (H 38.6 19 0.00041 33.8 1.8 16 303-318 4-19 (229)
212 TIGR01545 YfhB_g-proteo haloac 37.9 18 0.00039 35.1 1.5 16 303-318 5-20 (210)
213 PRK09456 ?-D-glucose-1-phospha 37.2 19 0.00041 33.8 1.5 14 305-318 2-15 (199)
214 PLN03064 alpha,alpha-trehalose 34.8 72 0.0016 38.2 6.0 71 300-379 588-660 (934)
215 PLN02177 glycerol-3-phosphate 30.4 41 0.00088 37.3 2.9 23 360-382 124-147 (497)
216 PF12710 HAD: haloacid dehalog 26.8 35 0.00076 31.0 1.4 13 306-318 1-13 (192)
217 KOG2134 Polynucleotide kinase 25.8 1E+02 0.0022 33.6 4.7 58 301-368 73-130 (422)
218 PF05761 5_nucleotid: 5' nucle 25.1 1.3E+02 0.0027 33.2 5.5 52 340-391 180-240 (448)
219 TIGR01490 HAD-SF-IB-hyp1 HAD-s 25.0 36 0.00078 31.6 1.2 13 306-318 2-14 (202)
220 PRK10671 copA copper exporting 23.7 66 0.0014 37.6 3.2 85 343-436 650-735 (834)
221 cd06537 CIDE_N_B CIDE_N domain 22.8 1.4E+02 0.0029 25.6 4.1 16 303-318 39-54 (81)
222 KOG3189 Phosphomannomutase [Li 21.3 1.4E+02 0.003 30.1 4.3 57 301-380 9-70 (252)
223 cd06539 CIDE_N_A CIDE_N domain 21.1 1.5E+02 0.0032 25.3 3.9 16 303-318 40-55 (78)
224 PLN02919 haloacid dehalogenase 21.0 55 0.0012 39.6 1.9 18 301-318 73-90 (1057)
No 1
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=100.00 E-value=3e-48 Score=384.00 Aligned_cols=180 Identities=58% Similarity=0.945 Sum_probs=172.9
Q ss_pred CCccCCCCceEEEEecCccccccc--ccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHH
Q 011589 295 PKETQGRKSVTLVLDLDETLVHST--LEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYA 372 (482)
Q Consensus 295 P~~~~~~kK~tLVLDLDeTLVhSs--~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA 372 (482)
|......+|++|||||||||||++ .++...++|.+++.+++..+.+||.+|||+++||+.++++||++||||+.+.||
T Consensus 81 ~~~~~~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya 160 (262)
T KOG1605|consen 81 PLRLATVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEIDGHIHQVYVRKRPHVDEFLSRVSKWYELVLFTASLEVYA 160 (262)
T ss_pred CcccccCCCceEEEeCCCcccccccccCCCCCcceeeeeeeCCcceEEEEEcCCCHHHHHHHhHHHHHHHHHHhhhHHHH
Confidence 344557889999999999999999 777789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCchHHHHHH
Q 011589 373 AQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLL 452 (482)
Q Consensus 373 ~~ILd~LDP~~klfs~RLyRe~C~~~~g~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~NgIpI~~w~gd~~D~eLl~Ll 452 (482)
.+|++.|||.+++|++|+||++|++.+|.|+|||+.+|+++++||||||+|.+|.+||+|||||++|++++.|+||++|+
T Consensus 161 ~~v~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~sw~~d~~D~eLL~Ll 240 (262)
T KOG1605|consen 161 DPLLDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIKSWFDDPTDTELLKLL 240 (262)
T ss_pred HHHHHHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccCccCCCcccccccCCChHHHHHHH
Confidence 99999999988899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCcHHHHHhhcCC
Q 011589 453 PFLDILADAEDVRPIIAKTFAF 474 (482)
Q Consensus 453 pfLe~L~~~~DVR~iL~krf~~ 474 (482)
|||++|+.++|||++++++|+.
T Consensus 241 pfLe~L~~~~Dvr~~l~~~~~~ 262 (262)
T KOG1605|consen 241 PFLEALAFVDDVRPILARRFGN 262 (262)
T ss_pred HHHHHhcccccHHHHHHHhhcC
Confidence 9999999999999999999874
No 2
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=100.00 E-value=1.5e-40 Score=307.24 Aligned_cols=161 Identities=57% Similarity=0.931 Sum_probs=153.9
Q ss_pred ceEEEEecCcccccccccccC-CCCceEEEEecceeceEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCC
Q 011589 303 SVTLVLDLDETLVHSTLEYCD-DADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDP 381 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~-~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~LDP 381 (482)
|+||||||||||||+++.+.. .+++.+.+.+++...++||++|||+.+||++|+++|||+|||++.+.||++|++.|||
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCc
Confidence 579999999999999988765 7788888888888889999999999999999999999999999999999999999999
Q ss_pred CCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCchHHHHHHHHHHhccCC
Q 011589 382 DGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILADA 461 (482)
Q Consensus 382 ~~klfs~RLyRe~C~~~~g~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~NgIpI~~w~gd~~D~eLl~LlpfLe~L~~~ 461 (482)
.+.+|++++||++|...++.|.|||+.+|+++++||||||++..|..|++|||+|.+|.|+.+|++|++|++||+.|+..
T Consensus 81 ~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~l~~~L~~l~~~ 160 (162)
T TIGR02251 81 GGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLIPFLEGLRFE 160 (162)
T ss_pred CCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHHHHHHHHHHhcc
Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CC
Q 011589 462 ED 463 (482)
Q Consensus 462 ~D 463 (482)
+|
T Consensus 161 ~~ 162 (162)
T TIGR02251 161 DD 162 (162)
T ss_pred CC
Confidence 76
No 3
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=100.00 E-value=1.1e-38 Score=289.72 Aligned_cols=158 Identities=51% Similarity=0.856 Sum_probs=130.8
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCC
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDG 383 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~LDP~~ 383 (482)
|||||||||||||+...+....++... . ....++|++|||+++||++++++|||+|||++.+.||++|++.|||.+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~---~-~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~ 76 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKII---D-QRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNG 76 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEE---T-EEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTT
T ss_pred CEEEEeCCCcEEEEeecCCCCccccee---c-cccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhc
Confidence 699999999999998766543343322 2 566789999999999999999999999999999999999999999988
Q ss_pred CeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceeeeccccCC-CCchHHHHHHHHHHhccCCC
Q 011589 384 KLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDD-PSDCSLISLLPFLDILADAE 462 (482)
Q Consensus 384 klfs~RLyRe~C~~~~g~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~NgIpI~~w~gd-~~D~eLl~LlpfLe~L~~~~ 462 (482)
.+|.++++|++|....|.++|||+++|+++++||||||++.+|..|++|+|+|++|.++ ++|++|.+|++||++|+..+
T Consensus 77 ~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~~~~~~D~~L~~l~~~L~~l~~~~ 156 (159)
T PF03031_consen 77 KLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFFGDTPNDRELLRLLPFLEELAKED 156 (159)
T ss_dssp SSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----SSCHTT--HHHHHHHHHHHHHTHS
T ss_pred cccccccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEEeccccCCCcchhHHHHHHHHHHHhCccc
Confidence 89999999999999888889999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CcH
Q 011589 463 DVR 465 (482)
Q Consensus 463 DVR 465 (482)
|||
T Consensus 157 Dvr 159 (159)
T PF03031_consen 157 DVR 159 (159)
T ss_dssp -CH
T ss_pred CCC
Confidence 998
No 4
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=100.00 E-value=1.6e-36 Score=289.68 Aligned_cols=159 Identities=23% Similarity=0.280 Sum_probs=137.1
Q ss_pred CCCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHH
Q 011589 299 QGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDI 378 (482)
Q Consensus 299 ~~~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~ 378 (482)
.+.+|+||||||||||||+... ..+.++.+|||+++||++++++|||+||||+++.||+.+++.
T Consensus 17 ~~~~kklLVLDLDeTLvh~~~~----------------~~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~ 80 (195)
T TIGR02245 17 PREGKKLLVLDIDYTLFDHRSP----------------AETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTE 80 (195)
T ss_pred CCCCCcEEEEeCCCceEccccc----------------CCCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHH
Confidence 3567899999999999997421 114578999999999999999999999999999999999999
Q ss_pred hCCCC-CeeeeEEEcccce------eeCCc-eeecccccC------CCCCcEEEEECChhhhccCCCceeeeccccC---
Q 011589 379 LDPDG-KLISRRVYRESCI------FSDGT-YTKDLTVLG------VDLAKVAIIDNSPQVFRLQVNNGIPIESWFD--- 441 (482)
Q Consensus 379 LDP~~-klfs~RLyRe~C~------~~~g~-yiKDLs~LG------RdLs~VIIVDDsp~~~~~qp~NgIpI~~w~g--- 441 (482)
|++.+ ..+..++++++|. ...|. ++|||+.++ +++++||||||+|.++.+||+|||+|++|++
T Consensus 81 l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~f~~~~~ 160 (195)
T TIGR02245 81 LGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRPFKKAHA 160 (195)
T ss_pred hcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCCccccCC
Confidence 98743 2356677778883 23454 599999873 3889999999999999999999999999995
Q ss_pred -CCCchHHHHHHHHHHhccCCCCcHHHHHhhcC
Q 011589 442 -DPSDCSLISLLPFLDILADAEDVRPIIAKTFA 473 (482)
Q Consensus 442 -d~~D~eLl~LlpfLe~L~~~~DVR~iL~krf~ 473 (482)
+.+|+||+.|+|||+.|+.++|||++++++|.
T Consensus 161 ~~~~D~eL~~L~~yL~~la~~~Dvr~~~~~~w~ 193 (195)
T TIGR02245 161 NRGTDQELLKLTQYLKTIAELEDFSSLDHKEWE 193 (195)
T ss_pred CCcccHHHHHHHHHHHHHhcCcccchhhhcccc
Confidence 57999999999999999999999999998885
No 5
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=99.97 E-value=3.4e-31 Score=244.55 Aligned_cols=138 Identities=31% Similarity=0.449 Sum_probs=118.0
Q ss_pred CCCceEEEEecCcccccccccccCCCCce------------EEEEecceeceEEEeeCchHHHHHHHhhcceEEEEEcCC
Q 011589 300 GRKSVTLVLDLDETLVHSTLEYCDDADFT------------FTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTAS 367 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~df~------------~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YEIvIfTAs 367 (482)
.++|++||||||||||||+..+....... -.+.+.......++++|||+.+||+++++.|+++|||++
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~ 82 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG 82 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence 57899999999999999997654322111 012233335678999999999999999999999999999
Q ss_pred cHHHHHHHHHHhCCCCCeeeeEE-EcccceeeCCceeeccc-ccCCCCCcEEEEECChhhhccCCCceeeecccc
Q 011589 368 QSIYAAQLLDILDPDGKLISRRV-YRESCIFSDGTYTKDLT-VLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWF 440 (482)
Q Consensus 368 ~k~YA~~ILd~LDP~~klfs~RL-yRe~C~~~~g~yiKDLs-~LGRdLs~VIIVDDsp~~~~~qp~NgIpI~~w~ 440 (482)
.+.||++|++.|||.+.+|++|+ +|++|. |.++|||+ .+|+++++||||||+|.+|..||+|+|+|++|.
T Consensus 83 ~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~---~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~~~N~i~i~~~~ 154 (156)
T TIGR02250 83 TRAYAQAIAKLIDPDGKYFGDRIISRDESG---SPHTKSLLRLFPADESMVVIIDDREDVWPWHKRNLIQIEPYN 154 (156)
T ss_pred cHHHHHHHHHHhCcCCCeeccEEEEeccCC---CCccccHHHHcCCCcccEEEEeCCHHHhhcCccCEEEeCCcc
Confidence 99999999999999998997775 599995 78999994 569999999999999999999999999999995
No 6
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=99.97 E-value=4e-31 Score=268.81 Aligned_cols=158 Identities=36% Similarity=0.662 Sum_probs=149.6
Q ss_pred ccCCCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHH
Q 011589 297 ETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLL 376 (482)
Q Consensus 297 ~~~~~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~IL 376 (482)
++..++++||||+|.++|||..|.. ..+|.+++|||++.||..++++|||||||+....||.+|+
T Consensus 183 pPy~Qp~yTLVleledvLVhpdws~---------------~tGwRf~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~ 247 (393)
T KOG2832|consen 183 PPYEQPPYTLVLELEDVLVHPDWSY---------------KTGWRFKKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLL 247 (393)
T ss_pred CcccCCCceEEEEeeeeEeccchhh---------------hcCceeccCchHHHHHHhhcccceEEEEecCCccchhhhH
Confidence 3457889999999999999998863 3578899999999999999999999999999999999999
Q ss_pred HHhCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCchHHHHHHHHHH
Q 011589 377 DILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLD 456 (482)
Q Consensus 377 d~LDP~~klfs~RLyRe~C~~~~g~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~NgIpI~~w~gd~~D~eLl~LlpfLe 456 (482)
+.|||.| +|+++|+|++|.+.+|..+|||+.|+||+++||+||=.+..+.+||+|+|++++|.|+.+|+.|++|++||+
T Consensus 248 d~lDP~g-~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W~Gn~dDt~L~dL~~FL~ 326 (393)
T KOG2832|consen 248 DALDPKG-YISYKLFRGATKYEEGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPWSGNDDDTSLFDLLAFLE 326 (393)
T ss_pred hhcCCcc-eEEEEEecCcccccCccchhhhhhhccccceeEEEEccccccccCcccccccCcCCCCcccchhhhHHHHHH
Confidence 9999996 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccC--CCCcHHHHHh
Q 011589 457 ILAD--AEDVRPIIAK 470 (482)
Q Consensus 457 ~L~~--~~DVR~iL~k 470 (482)
.|+. ++|||++|+.
T Consensus 327 ~ia~~~~eDvR~vL~~ 342 (393)
T KOG2832|consen 327 YIAQQQVEDVRPVLQS 342 (393)
T ss_pred HHHHccHHHHHHHHHH
Confidence 9985 7999999954
No 7
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.95 E-value=1.5e-28 Score=254.65 Aligned_cols=177 Identities=45% Similarity=0.726 Sum_probs=165.9
Q ss_pred ccCCCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHH
Q 011589 297 ETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLL 376 (482)
Q Consensus 297 ~~~~~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~IL 376 (482)
.....++++|++|||+||+|+....+...+|...+...+..+.+||..|||+++||..++++|++++||++.+.||++|+
T Consensus 206 ~~~~~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~~y~~~v~ 285 (390)
T COG5190 206 SKSTSPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKRYADPVL 285 (390)
T ss_pred hcCCCCccccccCCCccceeeccccccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecchhhhcchHH
Confidence 34566788999999999999998888888888777777778999999999999999999999999999999999999999
Q ss_pred HHhCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCchHHHHHHHHHH
Q 011589 377 DILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLD 456 (482)
Q Consensus 377 d~LDP~~klfs~RLyRe~C~~~~g~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~NgIpI~~w~gd~~D~eLl~LlpfLe 456 (482)
+.|++.+ .|++++||++|....|.|+|||..+||++.+|||||++|.+|.+||+|+|+|++|.+++.|.+|++|++||+
T Consensus 286 d~l~~~k-~~~~~lfr~sc~~~~G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~~i~i~~W~~d~~d~el~~ll~~le 364 (390)
T COG5190 286 DILDSDK-VFSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIPIEKWISDEHDDELLNLLPFLE 364 (390)
T ss_pred Hhccccc-eeehhhhcccceeccCchhhhHHhhccCCCceEEeeCChhhhhhCccceeccCcccccccchhhhhhccccc
Confidence 9999998 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccC--CCCcHHHHHhhcCC
Q 011589 457 ILAD--AEDVRPIIAKTFAF 474 (482)
Q Consensus 457 ~L~~--~~DVR~iL~krf~~ 474 (482)
.|.. ..||+.++..+-+.
T Consensus 365 ~L~~~~~~d~~~~l~~~~~~ 384 (390)
T COG5190 365 DLPDRDLKDVSSILQSRLEK 384 (390)
T ss_pred ccccccchhhhhhhhhhhHh
Confidence 9997 89999999766443
No 8
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.94 E-value=1.8e-26 Score=209.52 Aligned_cols=145 Identities=49% Similarity=0.859 Sum_probs=130.3
Q ss_pred CceEEEEecCcccccccc---cccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHH
Q 011589 302 KSVTLVLDLDETLVHSTL---EYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDI 378 (482)
Q Consensus 302 kK~tLVLDLDeTLVhSs~---~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~ 378 (482)
||++|||||||||||+.. .+.....+...+.+......+++++|||+.+||++|.+.|+++|||++.+.||+.+++.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~ 80 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL 80 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH
Confidence 578999999999999963 22234455666667788888999999999999999999999999999999999999999
Q ss_pred hCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCch
Q 011589 379 LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDC 446 (482)
Q Consensus 379 LDP~~klfs~RLyRe~C~~~~g~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~NgIpI~~w~gd~~D~ 446 (482)
+++.+.+|...+++++|...++.|.|+|+++|++++++|+|||++..|..++.|||+|++|.++.+|+
T Consensus 81 l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~~~~~d~ 148 (148)
T smart00577 81 LDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWFGDPDDT 148 (148)
T ss_pred hCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcCCCCCCC
Confidence 99976677999999999988878999999999999999999999999999999999999999998874
No 9
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.80 E-value=1.2e-19 Score=197.70 Aligned_cols=137 Identities=32% Similarity=0.459 Sum_probs=109.2
Q ss_pred CCceEEEEecCcccccccccccC--------CCCce-----EEEEec--ceeceEEEeeCchHHHHHHHhhcceEEEEEc
Q 011589 301 RKSVTLVLDLDETLVHSTLEYCD--------DADFT-----FTVFFN--MKEHTVYVKQRPHLKTFLERVAEMFEVVIFT 365 (482)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~~~~--------~~df~-----~~v~~~--~~~~~vyV~lRPgL~eFLe~Lsk~YEIvIfT 365 (482)
++++.||+|||.||+|+...+.. ..... --..++ .....+||++|||+++||++++++||++|||
T Consensus 144 ~~~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemhVyT 223 (635)
T KOG0323|consen 144 RKKLHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMHVYT 223 (635)
T ss_pred hhcceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeEEEe
Confidence 34479999999999999843211 00000 001112 2334689999999999999999999999999
Q ss_pred CCcHHHHHHHHHHhCCCCCeeeeEEE-cccceeeCCceeeccccc-CCCCCcEEEEECChhhhccCCCceeeecccc
Q 011589 366 ASQSIYAAQLLDILDPDGKLISRRVY-RESCIFSDGTYTKDLTVL-GVDLAKVAIIDNSPQVFRLQVNNGIPIESWF 440 (482)
Q Consensus 366 As~k~YA~~ILd~LDP~~klfs~RLy-Re~C~~~~g~yiKDLs~L-GRdLs~VIIVDDsp~~~~~qp~NgIpI~~w~ 440 (482)
.|.+.||..|++.|||.++||++|++ |+. ....-.+||..+ .++.++||||||+..+|..++.|.|.|.+|.
T Consensus 224 mg~R~YA~~i~~liDP~~~lF~dRIisrde---~~~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~~~nLI~i~~y~ 297 (635)
T KOG0323|consen 224 MGTRDYALEIAKLIDPEGKYFGDRIISRDE---SPFFKTLDLVLLFPCGDSMVVIIDDRSDVWPDHKRNLIQIAPYP 297 (635)
T ss_pred ccchHHHHHHHHHhCCCCccccceEEEecC---CCcccccccccCCCCCCccEEEEeCccccccCCCcceEEeeeee
Confidence 99999999999999999999999987 665 344567788776 4677889999999999999988999999973
No 10
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=98.45 E-value=5.1e-07 Score=85.54 Aligned_cols=137 Identities=14% Similarity=0.073 Sum_probs=90.3
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEec---ceeceEEEeeCchHHHHHHHhh-cceEEEEEcCC-cHHHHHHHHHH
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFN---MKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS-QSIYAAQLLDI 378 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~---~~~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs-~k~YA~~ILd~ 378 (482)
.++|||||+||........-+..+...-..+ .......+.++||+.++|++|. +.+.+.|.|++ ...++..+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~ 82 (174)
T TIGR01685 3 RVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT 82 (174)
T ss_pred cEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh
Confidence 4789999999965443222222111000000 0112345788999999999998 56999999988 99999999999
Q ss_pred hCCC--C------CeeeeEEEcccceeeCC--ceeecccc-c--CCCCCcEEEEECChhhhccCCCceeeecccc
Q 011589 379 LDPD--G------KLISRRVYRESCIFSDG--TYTKDLTV-L--GVDLAKVAIIDNSPQVFRLQVNNGIPIESWF 440 (482)
Q Consensus 379 LDP~--~------klfs~RLyRe~C~~~~g--~yiKDLs~-L--GRdLs~VIIVDDsp~~~~~qp~NgIpI~~w~ 440 (482)
++.. + .+|...+..+.....+. ...+.+.. + |-+++++++|||++........+|+.+--..
T Consensus 83 ~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~ 157 (174)
T TIGR01685 83 FEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCP 157 (174)
T ss_pred CCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcC
Confidence 9865 1 47877777543211110 11222222 2 5788999999999998877777888776553
No 11
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.37 E-value=2.4e-07 Score=82.59 Aligned_cols=111 Identities=15% Similarity=0.133 Sum_probs=75.0
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-cceEEEEEcCC-cHHHHHHHHHHhCC
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS-QSIYAAQLLDILDP 381 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs-~k~YA~~ILd~LDP 381 (482)
+.||+||||||+..-.... ..+-. .. .. .+.||+.++|++++ +.+.++|.|++ .+.++..+++.+.+
T Consensus 1 kli~~DlD~Tl~~~~~~~~-~~~~~----~~-~~-----~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~ 69 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVV-GEDPI----ID-LE-----VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED 69 (128)
T ss_pred CEEEEeCCCCCCCCCcccc-cCCcc----hh-hH-----HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc
Confidence 3789999999986621000 00000 00 00 57899999999998 46999999999 99999999998762
Q ss_pred ------CCCeeeeEEEcccceeeCCceeecccccC--CCCCcEEEEECChhhh
Q 011589 382 ------DGKLISRRVYRESCIFSDGTYTKDLTVLG--VDLAKVAIIDNSPQVF 426 (482)
Q Consensus 382 ------~~klfs~RLyRe~C~~~~g~yiKDLs~LG--RdLs~VIIVDDsp~~~ 426 (482)
-.++|......+.- .....+.+-+..+| ..++++++|||++...
T Consensus 70 ~~~i~~l~~~f~~~~~~~~~-pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~ 121 (128)
T TIGR01681 70 FGIIFPLAEYFDPLTIGYWL-PKSPRLVEIALKLNGVLKPKSILFVDDRPDNN 121 (128)
T ss_pred cccchhhHhhhhhhhhcCCC-cHHHHHHHHHHHhcCCCCcceEEEECCCHhHH
Confidence 12345544443221 11124556667789 9999999999999753
No 12
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=98.36 E-value=2.2e-07 Score=97.66 Aligned_cols=136 Identities=30% Similarity=0.463 Sum_probs=103.5
Q ss_pred CCCceEEEEecCcccccccccccCCC----------CceEEEEecceeceEEEeeCchHHHHHHHhhcceEEEEEcCCcH
Q 011589 300 GRKSVTLVLDLDETLVHSTLEYCDDA----------DFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQS 369 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~----------df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YEIvIfTAs~k 369 (482)
..++..||.|+|.|.+|+...+.... .+.....+......++++.||++..|+...++.||+.+||.|.+
T Consensus 23 q~~~~~l~~~~~~~~~h~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~i~~~~e~~~~~~~~~ 102 (390)
T COG5190 23 QDKKLILVVDLDQTIIHTTVDPNDPNNVNQSLERTLKSVNDRDPVQEKCAYYVKARPKLFPFLTKISPLYELHIYTMGTR 102 (390)
T ss_pred cCcccccccccccceecccccCCCCCchhhhhhccccchhccccccccccceeeecccccchhhhhchhcceeeEeeccc
Confidence 45677899999999999986651100 00111112223456899999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCeeeeEEEcccceeeCCceeeccccc-CCCCCcEEEEECChhhh---ccCCCceeeecc
Q 011589 370 IYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVL-GVDLAKVAIIDNSPQVF---RLQVNNGIPIES 438 (482)
Q Consensus 370 ~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g~yiKDLs~L-GRdLs~VIIVDDsp~~~---~~qp~NgIpI~~ 438 (482)
.||+.+.+++||.|++|..|....+ ...+.-.|-++++ ..+-..++++||++..| ... .|.++..+
T Consensus 103 ~~~~~~~~i~d~~g~~~~d~~~~~~--~~~~~~~~s~~~l~p~~~n~~vi~~d~~~~~~~~d~~-~~~v~~~~ 172 (390)
T COG5190 103 AYAERIAKIIDPTGKLFNDRILSRD--ESGSLSQKSLSRLFPKDQNMVVIIDDRGDVWGVGDMN-SNFVAKSP 172 (390)
T ss_pred cchhhhhhccccccccccccccccc--ccccchhhhhhhcCccccccccccccccccCCccchh-hhhhcccc
Confidence 9999999999999999988776322 2344556777766 67889999999999999 444 46777777
No 13
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.29 E-value=2.4e-06 Score=78.12 Aligned_cols=138 Identities=16% Similarity=0.074 Sum_probs=96.8
Q ss_pred EEEEecCcccccccccccCCCCceEEEEe---cc--eeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHH
Q 011589 305 TLVLDLDETLVHSTLEYCDDADFTFTVFF---NM--KEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDI 378 (482)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~df~~~v~~---~~--~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~ 378 (482)
.+|||+|+||.. +.+...+.-|.+. +. ...+.-|.+||++.+||+++.. .|-+..+|.....-|-++|.+
T Consensus 2 ~i~~d~d~t~wd----hh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLra 77 (164)
T COG4996 2 AIVFDADKTLWD----HHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRA 77 (164)
T ss_pred cEEEeCCCcccc----cccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHH
Confidence 589999999954 3332222222111 10 1235679999999999999995 589999999999999999999
Q ss_pred hCCCCCeeeeEEEcccceeeCCceeeccccc------CCCCCcEEEEECChhhh---ccCCCceeeeccccCCCCchHH
Q 011589 379 LDPDGKLISRRVYRESCIFSDGTYTKDLTVL------GVDLAKVAIIDNSPQVF---RLQVNNGIPIESWFDDPSDCSL 448 (482)
Q Consensus 379 LDP~~klfs~RLyRe~C~~~~g~yiKDLs~L------GRdLs~VIIVDDsp~~~---~~qp~NgIpI~~w~gd~~D~eL 448 (482)
||..+ ||.+.....|-.. ..+..+-|+.+ ...++++|.+||+...+ +....|.=.++.|.+-..-.+.
T Consensus 78 l~~~~-yFhy~ViePhP~K-~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~Di~c~~ei 154 (164)
T COG4996 78 LDLLQ-YFHYIVIEPHPYK-FLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKDISCYSEI 154 (164)
T ss_pred hchhh-hEEEEEecCCChh-HHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecchHHHHHH
Confidence 99986 8988877766421 11222222222 34788999999999776 4467888888998876444333
No 14
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.14 E-value=2e-06 Score=72.64 Aligned_cols=108 Identities=20% Similarity=0.281 Sum_probs=73.9
Q ss_pred EEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCCCC
Q 011589 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDG 383 (482)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~LDP~~ 383 (482)
++|||+||||+........ ...+..+|++.++|+++.+. +.++|.|++...++..+++.+....
T Consensus 1 ~~vfD~D~tl~~~~~~~~~---------------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~ 65 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAE---------------IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDD 65 (139)
T ss_pred CeEEccCCceEccCccccc---------------cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCch
Confidence 4799999999876421100 23467899999999999976 9999999999999999999986542
Q ss_pred CeeeeEEEcccceee----------------CC---ceeecccccCCCCCcEEEEECChhhhcc
Q 011589 384 KLISRRVYRESCIFS----------------DG---TYTKDLTVLGVDLAKVAIIDNSPQVFRL 428 (482)
Q Consensus 384 klfs~RLyRe~C~~~----------------~g---~yiKDLs~LGRdLs~VIIVDDsp~~~~~ 428 (482)
++..++..+..... ++ .+.+-+..++...+.++.|+|++.-...
T Consensus 66 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~ 128 (139)
T cd01427 66 -YFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEM 128 (139)
T ss_pred -hhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHH
Confidence 34444443222111 11 1222334456678999999999965433
No 15
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.13 E-value=1.2e-06 Score=83.12 Aligned_cols=95 Identities=13% Similarity=0.128 Sum_probs=77.6
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcEE
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~---g~yiKDLs~LGRdLs~VI 417 (482)
+.+.||+.++|+++++ .+.++|.|++.+.++..+++.++-.+ +|...+..+.+...+ ..|.+-++.+|.++++++
T Consensus 81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 159 (214)
T PRK13288 81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE-FFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEAL 159 (214)
T ss_pred cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-ceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEE
Confidence 6678999999999984 69999999999999999999998765 898888877654333 255667778888999999
Q ss_pred EEECChhhhccCCCceeeec
Q 011589 418 IIDNSPQVFRLQVNNGIPIE 437 (482)
Q Consensus 418 IVDDsp~~~~~qp~NgIpI~ 437 (482)
+|+|++.-+.....+|++.-
T Consensus 160 ~iGDs~~Di~aa~~aG~~~i 179 (214)
T PRK13288 160 MVGDNHHDILAGKNAGTKTA 179 (214)
T ss_pred EECCCHHHHHHHHHCCCeEE
Confidence 99999987766556777644
No 16
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=98.06 E-value=1.2e-06 Score=84.83 Aligned_cols=93 Identities=15% Similarity=0.164 Sum_probs=76.1
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEE
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VI 417 (482)
+...||+.++|+++.+ .+.+.|-|++.+.++...++.+.-.+ +|+..+..+.....+. .|.+-++++|.++++++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 170 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDA-HLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL 170 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHH-HCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 5678999999999996 59999999999999999999887654 7888887665443332 46677788999999999
Q ss_pred EEECChhhhccCCCceee
Q 011589 418 IIDNSPQVFRLQVNNGIP 435 (482)
Q Consensus 418 IVDDsp~~~~~qp~NgIp 435 (482)
+|+|++........+|+.
T Consensus 171 ~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 171 FIDDSEPILDAAAQFGIR 188 (224)
T ss_pred EEcCCHHHHHHHHHcCCe
Confidence 999999877666667775
No 17
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.02 E-value=5.1e-06 Score=73.11 Aligned_cols=114 Identities=20% Similarity=0.206 Sum_probs=76.3
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-cceEEEEEcCCc--------HHHHHH
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ--------SIYAAQ 374 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs~--------k~YA~~ 374 (482)
+.|+||+||||++.... . .......+.||+.++|++|. +.|.++|.|.+. ..++..
T Consensus 1 k~~~~D~dgtL~~~~~~--~-------------~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~ 65 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY--V-------------DDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVAR 65 (132)
T ss_pred CEEEEeCCCceecCCCC--C-------------CCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHH
Confidence 37899999999963100 0 00112467899999999997 559999999999 888999
Q ss_pred HHHHhCCCCCeeeeEEEccccee-eCCceeeccccc-CCCCCcEEEEEC-ChhhhccCCCceee
Q 011589 375 LLDILDPDGKLISRRVYRESCIF-SDGTYTKDLTVL-GVDLAKVAIIDN-SPQVFRLQVNNGIP 435 (482)
Q Consensus 375 ILd~LDP~~klfs~RLyRe~C~~-~~g~yiKDLs~L-GRdLs~VIIVDD-sp~~~~~qp~NgIp 435 (482)
+++.+... +...++...+.. ....|.+-++.+ +.+++++++|+| ...-......+|+.
T Consensus 66 ~l~~~~l~---~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 66 RLEELGVP---IDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHCCCC---EEEEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 99998764 222223221111 112455667778 589999999999 56555444344543
No 18
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.96 E-value=2.2e-05 Score=80.21 Aligned_cols=123 Identities=14% Similarity=0.148 Sum_probs=85.5
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeC-chHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHH
Q 011589 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQR-PHLKTFLERVAEM-FEVVIFTASQSIYAAQLLD 377 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lR-PgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd 377 (482)
...+..+|+||||||+-... -|.+| ||+.++|++|.+. +.++|||++.++++..+++
T Consensus 123 ~~~~kvIvFDLDgTLi~~~~---------------------~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~ 181 (301)
T TIGR01684 123 FEPPHVVVFDLDSTLITDEE---------------------PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMR 181 (301)
T ss_pred cccceEEEEecCCCCcCCCC---------------------ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
Confidence 44567999999999986531 26689 9999999999975 8999999999999999999
Q ss_pred HhCCCCCeeeeEEEcccceeeC----------------Cceeecc-----------------cccCCCC-CcEEEEECCh
Q 011589 378 ILDPDGKLISRRVYRESCIFSD----------------GTYTKDL-----------------TVLGVDL-AKVAIIDNSP 423 (482)
Q Consensus 378 ~LDP~~klfs~RLyRe~C~~~~----------------g~yiKDL-----------------s~LGRdL-s~VIIVDDsp 423 (482)
.++..+ +|...+..++..... ..+..|. +..|.+- +-+-+|||-+
T Consensus 182 ~lGLd~-YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvvl~yL~~~gvn~~KtitLVDDl~ 260 (301)
T TIGR01684 182 KVKLDR-YFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPRVVLWYLYDLGVNYFKSITLVDDLA 260 (301)
T ss_pred HcCCCc-ccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCeehHHHHHHcCCceeeeEEEeccCc
Confidence 999886 776666644332221 1222333 2224443 3356899988
Q ss_pred hhhccCCCceeeeccccCCCCc
Q 011589 424 QVFRLQVNNGIPIESWFDDPSD 445 (482)
Q Consensus 424 ~~~~~qp~NgIpI~~w~gd~~D 445 (482)
.. .++-+|-+.++..-.-.+|
T Consensus 261 ~N-n~~YD~fv~v~rcp~P~~D 281 (301)
T TIGR01684 261 DN-NFNYDYFVNVSRCPVPVND 281 (301)
T ss_pred cc-CccceeEEEeeeCCCCchH
Confidence 53 2345777777776543333
No 19
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.92 E-value=4.3e-05 Score=78.22 Aligned_cols=123 Identities=16% Similarity=0.189 Sum_probs=86.9
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeC-chHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHH
Q 011589 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQR-PHLKTFLERVAE-MFEVVIFTASQSIYAAQLLD 377 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lR-PgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd 377 (482)
.+.++.+|+||||||+.... -|.+| |++.++|++|++ .+.++|||++.++++..+++
T Consensus 125 ~~~~~~i~~D~D~TL~~~~~---------------------~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le 183 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITDEE---------------------PVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLK 183 (303)
T ss_pred eeeccEEEEecCCCccCCCC---------------------ccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHH
Confidence 35567999999999987631 26789 999999999996 59999999999999999999
Q ss_pred HhCCCCCeeeeEEEcccceeeC----------------Cceeeccc-----------------ccCCCC-CcEEEEECCh
Q 011589 378 ILDPDGKLISRRVYRESCIFSD----------------GTYTKDLT-----------------VLGVDL-AKVAIIDNSP 423 (482)
Q Consensus 378 ~LDP~~klfs~RLyRe~C~~~~----------------g~yiKDLs-----------------~LGRdL-s~VIIVDDsp 423 (482)
.+...+ +|...+..++..... ..+..|.. +.|.+- +-+-+|||-+
T Consensus 184 ~lgL~~-yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~ 262 (303)
T PHA03398 184 ETKLEG-YFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 262 (303)
T ss_pred HcCCCc-cccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHHHHcCcceeccEEEeccCc
Confidence 998875 776666644433211 12223333 224443 3356888887
Q ss_pred hhhccCCCceeeeccccCCCCc
Q 011589 424 QVFRLQVNNGIPIESWFDDPSD 445 (482)
Q Consensus 424 ~~~~~qp~NgIpI~~w~gd~~D 445 (482)
.. .++.+|-+.++..-.-.+|
T Consensus 263 ~N-n~~YD~fv~v~rcp~P~~D 283 (303)
T PHA03398 263 SN-NYSYDYFVNVKRCPEPVND 283 (303)
T ss_pred cc-CccceeEEEeeeCCCCcHH
Confidence 54 4567888888876554444
No 20
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.86 E-value=4.4e-06 Score=83.92 Aligned_cols=94 Identities=11% Similarity=0.086 Sum_probs=69.7
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEE
Q 011589 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIID 420 (482)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g~yiKDLs~LGRdLs~VIIVD 420 (482)
+...||+.++|++|. +.+.+.|.|++.+.++..+++.++... +|...+..+........+.+-+..+|.+++++++|+
T Consensus 141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~-~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IG 219 (273)
T PRK13225 141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS-LFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVG 219 (273)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-heEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEEC
Confidence 566899999999998 558999999999999999999998764 787665543321111233344456788889999999
Q ss_pred CChhhhccCCCceeee
Q 011589 421 NSPQVFRLQVNNGIPI 436 (482)
Q Consensus 421 Dsp~~~~~qp~NgIpI 436 (482)
|++.-.......|+..
T Consensus 220 Ds~~Di~aA~~AG~~~ 235 (273)
T PRK13225 220 DETRDVEAARQVGLIA 235 (273)
T ss_pred CCHHHHHHHHHCCCeE
Confidence 9997665544566654
No 21
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.81 E-value=3.4e-05 Score=71.86 Aligned_cols=115 Identities=15% Similarity=0.185 Sum_probs=75.9
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcH-------------
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQS------------- 369 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k------------- 369 (482)
+.|+||+||||+-.. .+. ...-.+.+.||+.++|++|++ .|.++|.|++..
T Consensus 2 ~~~~~D~Dgtl~~~~-------~~~--------~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~ 66 (176)
T TIGR00213 2 KAIFLDRDGTINIDH-------GYV--------HEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQ 66 (176)
T ss_pred CEEEEeCCCCEeCCC-------CCC--------CCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHH
Confidence 578999999998321 110 011125567999999999985 599999999885
Q ss_pred --HHHHHHHHHhCCCCCeeeeEEEcc-----------cceeeC---CceeecccccCCCCCcEEEEECChhhhccCCCce
Q 011589 370 --IYAAQLLDILDPDGKLISRRVYRE-----------SCIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNG 433 (482)
Q Consensus 370 --~YA~~ILd~LDP~~klfs~RLyRe-----------~C~~~~---g~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~Ng 433 (482)
.|...++..+... |...++.. .|...+ ..|.+-++++|.+++++++|+|++.-......+|
T Consensus 67 ~~~~~~~~l~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG 143 (176)
T TIGR00213 67 LTEWMDWSLAERDVD---LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAK 143 (176)
T ss_pred HHHHHHHHHHHcCCC---ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCC
Confidence 3444455544332 44444422 222222 2566667888999999999999998766555667
Q ss_pred eee
Q 011589 434 IPI 436 (482)
Q Consensus 434 IpI 436 (482)
+..
T Consensus 144 ~~~ 146 (176)
T TIGR00213 144 VKT 146 (176)
T ss_pred CcE
Confidence 653
No 22
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.80 E-value=1.8e-05 Score=71.66 Aligned_cols=116 Identities=20% Similarity=0.265 Sum_probs=75.7
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-cceEEEEEcCCcH-------------
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS------------- 369 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k------------- 369 (482)
++|+||+||||+........ ...-.+...||+.++|++|. +.|.++|.|++.+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~-------------~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~ 67 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYP-------------RSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRA 67 (147)
T ss_pred CeEEEeCCCceeccCCcccC-------------CCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHH
Confidence 37899999999987521100 00112467899999999998 5699999999874
Q ss_pred --HHHHHHHHHhCCCCCeeeeEEEc-----ccceeeC---CceeecccccCCCCCcEEEEECChhhhccCCCceee
Q 011589 370 --IYAAQLLDILDPDGKLISRRVYR-----ESCIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 435 (482)
Q Consensus 370 --~YA~~ILd~LDP~~klfs~RLyR-----e~C~~~~---g~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~NgIp 435 (482)
.++..+++.++.. +...++. +.....+ ..|.+-+..+|.+++++++|.|++.-.......||.
T Consensus 68 ~~~~~~~~l~~~~l~---~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 68 PNGRVLELLRQLGVA---VDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred HHHHHHHHHHhCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 5677777777654 2222222 1111111 244555667889999999999998766554445554
No 23
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=97.79 E-value=5.5e-06 Score=80.42 Aligned_cols=99 Identities=17% Similarity=0.207 Sum_probs=84.4
Q ss_pred EeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEE
Q 011589 342 VKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VI 417 (482)
+...||+.+||+.|.+. .-+++-|++.+..+..+++.+...+ +|..++++++....+. .|.+-.++||.+++++|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~-~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cv 163 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD-YFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECV 163 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh-hcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeE
Confidence 78999999999999977 9999999999999999999998876 8999999887765543 68899999999999999
Q ss_pred EEECChhhhccCCCceeeeccccC
Q 011589 418 IIDNSPQVFRLQVNNGIPIESWFD 441 (482)
Q Consensus 418 IVDDsp~~~~~qp~NgIpI~~w~g 441 (482)
+|+|++.-......-|+.+-.+.+
T Consensus 164 viEDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 164 VVEDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred EEecchhHHHHHHHCCCEEEEecC
Confidence 999999877555555666665554
No 24
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.78 E-value=4.8e-05 Score=70.88 Aligned_cols=122 Identities=16% Similarity=0.146 Sum_probs=85.1
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCC---------------
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTAS--------------- 367 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs--------------- 367 (482)
+.|+||.||||++.... .| . ....-.+..-||+.++|++|.+ .|.++|.|+.
T Consensus 2 ~~~~~d~dg~l~~~~~~-----~~--~-----~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~ 69 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPS-----DF--Q-----VDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDG 69 (161)
T ss_pred CEEEEeCCCCccccCCC-----cc--c-----cCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHH
Confidence 57999999999885311 00 0 0111146778999999999995 5999999996
Q ss_pred cHHHHHHHHHHhCCCCCeeeeEEEc-----ccceeeCC---ceeecccccCCCCCcEEEEECChhhhccCCCceeeeccc
Q 011589 368 QSIYAAQLLDILDPDGKLISRRVYR-----ESCIFSDG---TYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESW 439 (482)
Q Consensus 368 ~k~YA~~ILd~LDP~~klfs~RLyR-----e~C~~~~g---~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~NgIpI~~w 439 (482)
...++..+++.++.. |...++. +.+...+. .+..-++.+|.+++++++|.|+..-......+|+..-.+
T Consensus 70 ~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~ 146 (161)
T TIGR01261 70 PHNLMLQIFRSQGII---FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQY 146 (161)
T ss_pred HHHHHHHHHHHCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEE
Confidence 466888888888874 7666653 44443332 344445667889999999999987665555677766544
Q ss_pred c
Q 011589 440 F 440 (482)
Q Consensus 440 ~ 440 (482)
.
T Consensus 147 ~ 147 (161)
T TIGR01261 147 D 147 (161)
T ss_pred C
Confidence 3
No 25
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=97.76 E-value=6.7e-05 Score=71.04 Aligned_cols=117 Identities=16% Similarity=0.169 Sum_probs=63.4
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecce------eceEEEeeCchHHHHHHHhhc-ceEEEEEcC-CcHHHHHH
Q 011589 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMK------EHTVYVKQRPHLKTFLERVAE-MFEVVIFTA-SQSIYAAQ 374 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~------~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTA-s~k~YA~~ 374 (482)
++++|||||.||...-.... ..-|++.... ..+.-|.+-|++.+.|+.|.+ ..+|.+.|. ...+.|.+
T Consensus 3 PklvvFDLD~TlW~~~~~~~----~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~ 78 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTH----VGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARE 78 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTS----S-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhc----cCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHH
Confidence 46899999999965532222 2222222221 234568999999999999994 699999995 56789999
Q ss_pred HHHHhCCC---------CCeeeeEEEcccceeeCCceeecc-cccCCCCCcEEEEECChhhh
Q 011589 375 LLDILDPD---------GKLISRRVYRESCIFSDGTYTKDL-TVLGVDLAKVAIIDNSPQVF 426 (482)
Q Consensus 375 ILd~LDP~---------~klfs~RLyRe~C~~~~g~yiKDL-s~LGRdLs~VIIVDDsp~~~ 426 (482)
+|+.|... ..+|.+.-.-.+ .+...++.| +..|.+.+.++++||.....
T Consensus 79 ~L~~l~i~~~~~~~~~~~~~F~~~eI~~g---sK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~ 137 (169)
T PF12689_consen 79 LLKLLEIDDADGDGVPLIEYFDYLEIYPG---SKTTHFRRIHRKTGIPYEEMLFFDDESRNI 137 (169)
T ss_dssp HHHHTT-C----------CCECEEEESSS----HHHHHHHHHHHH---GGGEEEEES-HHHH
T ss_pred HHHhcCCCccccccccchhhcchhheecC---chHHHHHHHHHhcCCChhHEEEecCchhcc
Confidence 99999877 024443211111 111223333 35688999999999998655
No 26
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=97.75 E-value=7.3e-06 Score=77.74 Aligned_cols=94 Identities=16% Similarity=0.240 Sum_probs=67.9
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccce-----------ee-CC-ceeeccc
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCI-----------FS-DG-TYTKDLT 407 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~-----------~~-~g-~yiKDLs 407 (482)
+..+||+.+||+++.+ .+.++|.|++...++..+++.+.-.. +|...+.-++-. .. ++ .+.+-++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA-AFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc-eEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 5689999999999996 59999999999999999999987665 665544321110 00 11 2333345
Q ss_pred ccCCCCCcEEEEECChhhhccCCCceeee
Q 011589 408 VLGVDLAKVAIIDNSPQVFRLQVNNGIPI 436 (482)
Q Consensus 408 ~LGRdLs~VIIVDDsp~~~~~qp~NgIpI 436 (482)
.+|.+++++++|+|++.-...-...|+.+
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i 191 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGI 191 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeE
Confidence 67888999999999987665544456665
No 27
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=97.73 E-value=4.7e-05 Score=77.81 Aligned_cols=107 Identities=17% Similarity=0.130 Sum_probs=74.3
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceE-EEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHH--
Q 011589 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTV-YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDI-- 378 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~v-yV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~-- 378 (482)
+++||+|||+||+.-..... +..++ .....|++.++|+.++ +.+.+.|.|......|..+++.
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~-------------g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~ 69 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGED-------------GIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRK 69 (320)
T ss_pred eEEEEEcCCCCCCCCEEccC-------------CccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCc
Confidence 67999999999975431110 01111 1224789999999998 5599999999999999999998
Q ss_pred --hCCCCCeeeeEEEcccceeeC-CceeecccccCCCCCcEEEEECChhhh
Q 011589 379 --LDPDGKLISRRVYRESCIFSD-GTYTKDLTVLGVDLAKVAIIDNSPQVF 426 (482)
Q Consensus 379 --LDP~~klfs~RLyRe~C~~~~-g~yiKDLs~LGRdLs~VIIVDDsp~~~ 426 (482)
+.... +|...... ...+ ..+.+-++.+|.+++.+|+|||++...
T Consensus 70 ~~~~~~~-~f~~~~~~---~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~ 116 (320)
T TIGR01686 70 DFILQAE-DFDARSIN---WGPKSESLRKIAKKLNLGTDSFLFIDDNPAER 116 (320)
T ss_pred cccCcHH-HeeEEEEe---cCchHHHHHHHHHHhCCCcCcEEEECCCHHHH
Confidence 55443 45443221 1111 234455567899999999999999755
No 28
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.68 E-value=7.8e-05 Score=69.51 Aligned_cols=116 Identities=15% Similarity=0.110 Sum_probs=76.3
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcc-eEEEEEcCCcH------------
Q 011589 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQS------------ 369 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k------------ 369 (482)
.+.|+||+||||+-.... +..... .+...||+.++|++|++. |.++|.|++..
T Consensus 3 ~~~~~~d~~~t~~~~~~~------------~~~~~~--~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~ 68 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDG------------YVKSPD--EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLN 68 (181)
T ss_pred ccEEEEECCCCcccCCcc------------ccCCHH--HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHH
Confidence 368999999999654210 011111 255789999999999965 99999998863
Q ss_pred ---HHHHHHHHHhCCCCCeeeeEEEcccc-----eeeC---CceeecccccCCCCCcEEEEECChhhhccCCCceee
Q 011589 370 ---IYAAQLLDILDPDGKLISRRVYRESC-----IFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 435 (482)
Q Consensus 370 ---~YA~~ILd~LDP~~klfs~RLyRe~C-----~~~~---g~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~NgIp 435 (482)
.+...+++.++- +|...++...+ ...+ ..|.+-+..+|.+++++++|.|++.-.......|+.
T Consensus 69 ~~~~~~~~~l~~~g~---~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 69 ALHEKMDWSLADRGG---RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT 142 (181)
T ss_pred HHHHHHHHHHHHcCC---ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe
Confidence 334445554432 36666654322 2222 256677778899999999999999766544445553
No 29
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.59 E-value=4.5e-05 Score=76.15 Aligned_cols=127 Identities=12% Similarity=0.099 Sum_probs=91.0
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHh
Q 011589 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDIL 379 (482)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~L 379 (482)
.++..+++|+||||....... ..++. ...-....|++.++|+++.+ .+.++|.|+....+++.+++.|
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~--~~~~~---------~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRS--PYDWT---------KVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCC--ccchh---------hcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH
Confidence 345789999999998754211 11111 01124569999999999985 4999999999999999999999
Q ss_pred CCCCCeeeeEEEccc-------ceeeCC---ceeecccccCC-CCCcEEEEECChhhhccCCCceeeecc
Q 011589 380 DPDGKLISRRVYRES-------CIFSDG---TYTKDLTVLGV-DLAKVAIIDNSPQVFRLQVNNGIPIES 438 (482)
Q Consensus 380 DP~~klfs~RLyRe~-------C~~~~g---~yiKDLs~LGR-dLs~VIIVDDsp~~~~~qp~NgIpI~~ 438 (482)
...+.+|...+..+. ....+. .+.+.|..++. +.+.++.|+|++........+||+.-.
T Consensus 225 ~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~ 294 (300)
T PHA02530 225 RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQ 294 (300)
T ss_pred HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEE
Confidence 988767766655552 111111 23445566677 679999999999988887788887654
No 30
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.45 E-value=0.00011 Score=65.20 Aligned_cols=94 Identities=18% Similarity=0.309 Sum_probs=76.9
Q ss_pred EEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCc
Q 011589 340 VYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAK 415 (482)
Q Consensus 340 vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~ 415 (482)
......||+.++|+.++ +.+.++|.|.+...++..+++.+... .+|...+..++....+. .|.+-++.+|.++++
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~ 152 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD-DYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE 152 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG-GGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc-cccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence 35889999999999999 88999999999999999999999776 48988888776554433 566777788999999
Q ss_pred EEEEECChhhhccCCCcee
Q 011589 416 VAIIDNSPQVFRLQVNNGI 434 (482)
Q Consensus 416 VIIVDDsp~~~~~qp~NgI 434 (482)
+++|||++.........|+
T Consensus 153 ~~~vgD~~~d~~~A~~~G~ 171 (176)
T PF13419_consen 153 ILFVGDSPSDVEAAKEAGI 171 (176)
T ss_dssp EEEEESSHHHHHHHHHTTS
T ss_pred EEEEeCCHHHHHHHHHcCC
Confidence 9999999976654334444
No 31
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.40 E-value=0.00018 Score=71.38 Aligned_cols=131 Identities=11% Similarity=0.109 Sum_probs=76.2
Q ss_pred CCCceEEEEecCcccccccccc-c-----CCCCceEEE--Eecc---eeceEEEeeCchHHHHHHHhhc-ceEEEEEcCC
Q 011589 300 GRKSVTLVLDLDETLVHSTLEY-C-----DDADFTFTV--FFNM---KEHTVYVKQRPHLKTFLERVAE-MFEVVIFTAS 367 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~-~-----~~~df~~~v--~~~~---~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs 367 (482)
.++++.++|||||||++++..- . ...++..-+ .+.. ....-.....|++.+||+++.+ .+.++|.|+.
T Consensus 60 ~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr 139 (237)
T TIGR01672 60 GRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGR 139 (237)
T ss_pred CCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCC
Confidence 4456699999999999997410 0 110010000 0000 0001123444559999999985 5999999998
Q ss_pred ----cHHHHHHHHHHhCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceee
Q 011589 368 ----QSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 435 (482)
Q Consensus 368 ----~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~NgIp 435 (482)
...+++.+++.+...+ +|...+..+.....+ +-|. ..+ .....+|.|-|+..-+......|+.
T Consensus 140 ~~~k~~~~a~~ll~~lGi~~-~f~~i~~~d~~~~~K--p~~~-~~l-~~~~i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 140 TPGKTDTVSKTLAKNFHIPA-MNPVIFAGDKPGQYQ--YTKT-QWI-QDKNIRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CCCcCHHHHHHHHHHhCCch-heeEEECCCCCCCCC--CCHH-HHH-HhCCCeEEEeCCHHHHHHHHHCCCC
Confidence 7789999999988865 665554444332211 1111 111 1123378899988766554455655
No 32
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.29 E-value=0.00052 Score=64.12 Aligned_cols=107 Identities=18% Similarity=0.269 Sum_probs=67.4
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-cceEEEEEcCCcHH-----------
Q 011589 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSI----------- 370 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~----------- 370 (482)
+++++||+||||+-...... + ......| ..+-||+.+.|++|. +.|.++|.|++...
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~~----~------~~~~~~~-~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~ 81 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGKV----F------PTSASDW-RFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFK 81 (166)
T ss_pred CcEEEEeCCCceEecCCCCc----c------cCChHHe-EEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHH
Confidence 35799999999986431100 0 0001111 124599999999997 67999999998763
Q ss_pred -HHHHHHHHhCCCCCeeeeEEEcccceeeC---CceeecccccC--CCCCcEEEEECCh
Q 011589 371 -YAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLG--VDLAKVAIIDNSP 423 (482)
Q Consensus 371 -YA~~ILd~LDP~~klfs~RLyRe~C~~~~---g~yiKDLs~LG--RdLs~VIIVDDsp 423 (482)
++..+++.++.. +...+..+.....+ +.+..-+..+| .+++++++|.|++
T Consensus 82 ~~i~~~l~~~gl~---~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~ 137 (166)
T TIGR01664 82 NKIEAFLEKLKVP---IQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA 137 (166)
T ss_pred HHHHHHHHHcCCC---EEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence 567778887763 22233322221111 23344456677 7899999999986
No 33
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.21 E-value=0.00028 Score=66.78 Aligned_cols=94 Identities=16% Similarity=0.224 Sum_probs=74.4
Q ss_pred EEeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcE
Q 011589 341 YVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKV 416 (482)
Q Consensus 341 yV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~V 416 (482)
++.+.||+.+||++|.+. +.++|.|++...++...++.++... +|...+..+.....+. .|.+-++++|.+.+++
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRD-FFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHH-hccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 367899999999999865 9999999999999999999998765 8888887766544333 5677788899999999
Q ss_pred EEEECCh-hhhccCCCceee
Q 011589 417 AIIDNSP-QVFRLQVNNGIP 435 (482)
Q Consensus 417 IIVDDsp-~~~~~qp~NgIp 435 (482)
|+|.|++ .-.......|+.
T Consensus 171 ~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 171 VMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred EEECCChHHHHHHHHHCCCE
Confidence 9999998 344333344544
No 34
>PRK06769 hypothetical protein; Validated
Probab=97.18 E-value=0.00042 Score=64.80 Aligned_cols=116 Identities=17% Similarity=0.200 Sum_probs=70.8
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHH-----HHHHHH
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIY-----AAQLLD 377 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~Y-----A~~ILd 377 (482)
..|+||+||||.-.. + + .+.-.+.+.||+.++|++|.+ .|.++|.|++.... ......
T Consensus 5 ~~~~~d~d~~~~~~~--------~---~-----~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~ 68 (173)
T PRK06769 5 QAIFIDRDGTIGGDT--------T---I-----HYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQ 68 (173)
T ss_pred cEEEEeCCCcccCCC--------C---C-----CCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHH
Confidence 478999999994110 0 0 000124568999999999985 59999999876421 112233
Q ss_pred HhCCCCCeeeeEEE-----cccceeeC---CceeecccccCCCCCcEEEEECChhhhccCCCceeeec
Q 011589 378 ILDPDGKLISRRVY-----RESCIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 437 (482)
Q Consensus 378 ~LDP~~klfs~RLy-----Re~C~~~~---g~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~NgIpI~ 437 (482)
.+...+ |...+. .+.....+ ..|.+-++++|.+++++++|+|++.-.......|+..-
T Consensus 69 ~l~~~g--~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 69 ELKGFG--FDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred HHHhCC--cCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 333333 333332 12112222 25667778889999999999999976654444555443
No 35
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.16 E-value=0.00058 Score=63.69 Aligned_cols=107 Identities=18% Similarity=0.163 Sum_probs=73.1
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcc-eEEEEEcCCc-HHHHHHHHHH
Q 011589 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQ-SIYAAQLLDI 378 (482)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~-YEIvIfTAs~-k~YA~~ILd~ 378 (482)
.+-..||+|+||||..... ....||+.++|++|.+. +.++|.|.+. ...+..+++.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~----------------------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~ 80 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDH----------------------NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA 80 (170)
T ss_pred CCCCEEEEecCCccccCCC----------------------CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH
Confidence 4456899999999985420 23469999999999865 9999999998 6888888777
Q ss_pred hCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECChh-hhccCCCceeee
Q 011589 379 LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ-VFRLQVNNGIPI 436 (482)
Q Consensus 379 LDP~~klfs~RLyRe~C~~~~g~yiKDLs~LGRdLs~VIIVDDsp~-~~~~qp~NgIpI 436 (482)
++... + . .........+.+-++.+|.+.+++++|+|+.. -......+|+..
T Consensus 81 ~gl~~-~-----~-~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 81 LGIPV-L-----P-HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred cCCEE-E-----c-CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 65421 1 1 11111122455566778889999999999983 443333445443
No 36
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.16 E-value=9.5e-05 Score=69.30 Aligned_cols=95 Identities=18% Similarity=0.150 Sum_probs=62.3
Q ss_pred EEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEc-cccee-----eCC-ceeecccccCCCC
Q 011589 341 YVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYR-ESCIF-----SDG-TYTKDLTVLGVDL 413 (482)
Q Consensus 341 yV~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyR-e~C~~-----~~g-~yiKDLs~LGRdL 413 (482)
.+..+||+.+||+.+.+.+.++|.|++...+++.+++.++... +|..++.- +.-.. ..+ ....=+..++...
T Consensus 66 ~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~ 144 (205)
T PRK13582 66 TLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPT-LFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLG 144 (205)
T ss_pred hCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCch-hhcceEEECCCCeEECccccccchHHHHHHHHHHhC
Confidence 3567899999999999779999999999999999999988653 56554432 11100 001 0011122334455
Q ss_pred CcEEEEECChhhhccCCCceeee
Q 011589 414 AKVAIIDNSPQVFRLQVNNGIPI 436 (482)
Q Consensus 414 s~VIIVDDsp~~~~~qp~NgIpI 436 (482)
.+++.|-|+..-.......|+.+
T Consensus 145 ~~~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 145 YRVIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred CeEEEEeCCHHHHHHHHhCCCCE
Confidence 78999999997654433344444
No 37
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=97.15 E-value=0.00044 Score=62.86 Aligned_cols=92 Identities=20% Similarity=0.254 Sum_probs=70.8
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcEE
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~---g~yiKDLs~LGRdLs~VI 417 (482)
+..+||+.+||+++++ .|.++|.|++...+ ..++..++..+ +|...++.+.....+ ..|.+-++.+|.++++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRD-LFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHH-HCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 5778999999999985 69999999999999 66666676654 788888766554433 256666778899999999
Q ss_pred EEECChhhhccCCCceee
Q 011589 418 IIDNSPQVFRLQVNNGIP 435 (482)
Q Consensus 418 IVDDsp~~~~~qp~NgIp 435 (482)
+|+|++.........|+.
T Consensus 162 ~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 162 FVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred EEcCCHHHHHHHHHcCCE
Confidence 999999766544445543
No 38
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.13 E-value=0.0015 Score=66.58 Aligned_cols=71 Identities=20% Similarity=0.253 Sum_probs=57.9
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEee-CchHHHHHHHhhcce-EEEEEcCCcHHHHHHHHHH
Q 011589 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQ-RPHLKTFLERVAEMF-EVVIFTASQSIYAAQLLDI 378 (482)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~l-RPgL~eFLe~Lsk~Y-EIvIfTAs~k~YA~~ILd~ 378 (482)
.++-++|+|||.|||-.... +++ -|.+.+.|.++++.+ -+++||.|.++++..-++.
T Consensus 120 ~~phVIVfDlD~TLItd~~~---------------------v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~ 178 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGD---------------------VRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKE 178 (297)
T ss_pred CCCcEEEEECCCcccccCCc---------------------cccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHH
Confidence 44559999999999976421 222 388899999999765 8999999999999999999
Q ss_pred hCCCCCeeeeEEEcc
Q 011589 379 LDPDGKLISRRVYRE 393 (482)
Q Consensus 379 LDP~~klfs~RLyRe 393 (482)
+...+ +|...|.+.
T Consensus 179 ~~L~~-~Fd~ii~~G 192 (297)
T PF05152_consen 179 LKLEG-YFDIIICGG 192 (297)
T ss_pred hCCcc-ccEEEEeCC
Confidence 99885 898888754
No 39
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.11 E-value=0.00046 Score=63.13 Aligned_cols=86 Identities=12% Similarity=0.194 Sum_probs=59.1
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC-----------------cee
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG-----------------TYT 403 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g-----------------~yi 403 (482)
+.++||+.++|+++.+ .+.++|.|++...+++.+++.++-.. +|...+..+......| ...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKD-VFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChh-heeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 6899999999999985 59999999999999999999987654 6766664322111111 111
Q ss_pred e--cccccCCC-CCcEEEEECChhhhcc
Q 011589 404 K--DLTVLGVD-LAKVAIIDNSPQVFRL 428 (482)
Q Consensus 404 K--DLs~LGRd-Ls~VIIVDDsp~~~~~ 428 (482)
| -+..+... .+++|+|+|+..-+..
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~a 177 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCP 177 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhch
Confidence 2 12222233 6789999998876544
No 40
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.11 E-value=0.00051 Score=68.64 Aligned_cols=97 Identities=11% Similarity=0.187 Sum_probs=80.3
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEE
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VI 417 (482)
+.+.||+.++|++|.+ .|.++|.|++.+.++..+++.++-.+ +|...+..+.+...+. .|.+-+.++|..+++++
T Consensus 108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l 186 (260)
T PLN03243 108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG-FFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCI 186 (260)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh-hCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeE
Confidence 5678999999999985 59999999999999999999998665 8999988877654443 56777888999999999
Q ss_pred EEECChhhhccCCCceeeeccc
Q 011589 418 IIDNSPQVFRLQVNNGIPIESW 439 (482)
Q Consensus 418 IVDDsp~~~~~qp~NgIpI~~w 439 (482)
+|+|++.-.......|+..-..
T Consensus 187 ~IgDs~~Di~aA~~aG~~~i~v 208 (260)
T PLN03243 187 VFGNSNSSVEAAHDGCMKCVAV 208 (260)
T ss_pred EEcCCHHHHHHHHHcCCEEEEE
Confidence 9999998776666677665443
No 41
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=97.10 E-value=0.0012 Score=69.22 Aligned_cols=120 Identities=17% Similarity=0.176 Sum_probs=79.1
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCC-------------
Q 011589 302 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTAS------------- 367 (482)
Q Consensus 302 kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs------------- 367 (482)
+++.|+||-||||+........ ....-.+.+.||+.++|++|.+ .|.++|.|..
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~------------~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l 68 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQ------------VDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDF 68 (354)
T ss_pred CCcEEEEeCCCCccCCCCcccc------------ccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHH
Confidence 4679999999999987421100 1112247889999999999985 5999999995
Q ss_pred --cHHHHHHHHHHhCCCCCeeeeEEEc-----ccceeeCC---ceeecccccCCCCCcEEEEECChhhhccCCCceeee
Q 011589 368 --QSIYAAQLLDILDPDGKLISRRVYR-----ESCIFSDG---TYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPI 436 (482)
Q Consensus 368 --~k~YA~~ILd~LDP~~klfs~RLyR-----e~C~~~~g---~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~NgIpI 436 (482)
...++..+++.+.. +|...++. +.|...+. .+..-+..++.+++++++|-|+..-......+|+..
T Consensus 69 ~~~~~~i~~iL~~~gl---~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 69 DPPHNLMMQIFESQGI---KFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred hhHHHHHHHHHHHcCC---ceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 24556666666544 36555554 34433322 222333456889999999999986665544566553
No 42
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.09 E-value=0.00041 Score=65.42 Aligned_cols=94 Identities=14% Similarity=0.096 Sum_probs=75.3
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeeccccc-CCCCCcEE
Q 011589 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVL-GVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~L-GRdLs~VI 417 (482)
+.++||+.++|+++.+.+.++|-|++...+++.+++.+.-.+ +|+..+..+.....+. .|.+-++++ |.+++++|
T Consensus 96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v 174 (224)
T TIGR02254 96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFP-FFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVL 174 (224)
T ss_pred CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHh-hcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheE
Confidence 578999999999999779999999999999999999987765 7888888766554432 566778888 99999999
Q ss_pred EEECCh-hhhccCCCceeee
Q 011589 418 IIDNSP-QVFRLQVNNGIPI 436 (482)
Q Consensus 418 IVDDsp-~~~~~qp~NgIpI 436 (482)
+|+|++ .-......+|++.
T Consensus 175 ~igD~~~~di~~A~~~G~~~ 194 (224)
T TIGR02254 175 MIGDSLTADIKGGQNAGLDT 194 (224)
T ss_pred EECCCcHHHHHHHHHCCCcE
Confidence 999997 4554444455543
No 43
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.08 E-value=0.00049 Score=67.55 Aligned_cols=96 Identities=17% Similarity=0.254 Sum_probs=79.6
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEE
Q 011589 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VI 417 (482)
+.+.||+.++|++|. +.+.++|-|++.+.+++.+++.++..+ +|...+..+.+...+. .|.+-++++|.++++++
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l 185 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD-FFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTF 185 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh-hCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEE
Confidence 667899999999997 569999999999999999999998765 8998888776654433 56777888999999999
Q ss_pred EEECChhhhccCCCceeeecc
Q 011589 418 IIDNSPQVFRLQVNNGIPIES 438 (482)
Q Consensus 418 IVDDsp~~~~~qp~NgIpI~~ 438 (482)
+|.|++.-......+|++.-.
T Consensus 186 ~vgDs~~Di~aA~~aGi~~i~ 206 (248)
T PLN02770 186 VFEDSVSGIKAGVAAGMPVVG 206 (248)
T ss_pred EEcCCHHHHHHHHHCCCEEEE
Confidence 999999877665567776553
No 44
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.07 E-value=0.00062 Score=64.17 Aligned_cols=96 Identities=15% Similarity=0.125 Sum_probs=77.2
Q ss_pred EEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcE
Q 011589 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKV 416 (482)
Q Consensus 341 yV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~---g~yiKDLs~LGRdLs~V 416 (482)
.+...||+.++|+++. +.+.++|.|.+...++..+++.++..+ +|...+..+++...+ ..|.+-++.+|-+++++
T Consensus 73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 151 (205)
T TIGR01454 73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLP-LFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDA 151 (205)
T ss_pred ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChh-heeeEEecCcCCCCCCChHHHHHHHHHcCCChhhe
Confidence 3677899999999998 469999999999999999999998875 788877766654322 24556677889899999
Q ss_pred EEEECChhhhccCCCceeeec
Q 011589 417 AIIDNSPQVFRLQVNNGIPIE 437 (482)
Q Consensus 417 IIVDDsp~~~~~qp~NgIpI~ 437 (482)
++|+|++.-+.....+|++.-
T Consensus 152 l~igD~~~Di~aA~~~Gi~~i 172 (205)
T TIGR01454 152 VMVGDAVTDLASARAAGTATV 172 (205)
T ss_pred EEEcCCHHHHHHHHHcCCeEE
Confidence 999999977766666777654
No 45
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.05 E-value=0.00052 Score=64.21 Aligned_cols=93 Identities=15% Similarity=0.199 Sum_probs=74.0
Q ss_pred EeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEE
Q 011589 342 VKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VI 417 (482)
+...||+.++|+++++. |.++|.|.+...++..+++.+.-. .+|...+..++....+. .|.+-++.+|.++++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD-DPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh-hhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 45789999999999975 999999999999999999998754 37888888766543332 45666778899999999
Q ss_pred EEECChhhhccCCCceee
Q 011589 418 IIDNSPQVFRLQVNNGIP 435 (482)
Q Consensus 418 IVDDsp~~~~~qp~NgIp 435 (482)
+|+|++.-.......|+.
T Consensus 170 ~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 170 FVASNPWDLGGAKKFGFK 187 (198)
T ss_pred EEeCCHHHHHHHHHCCCc
Confidence 999999665444455554
No 46
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.03 E-value=0.00056 Score=64.24 Aligned_cols=96 Identities=16% Similarity=0.121 Sum_probs=75.6
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEE
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VI 417 (482)
+.++||+.++|+++.+ .+.++|.|++.+.+++.+++.++-.+ +|...+..+.....+. .|.+-++.+|.++++++
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 162 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK-YFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMV 162 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh-hCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeE
Confidence 6789999999999984 59999999999999999999988765 7877666654332222 45677788899999999
Q ss_pred EEECChhhhccCCCceeeecc
Q 011589 418 IIDNSPQVFRLQVNNGIPIES 438 (482)
Q Consensus 418 IVDDsp~~~~~qp~NgIpI~~ 438 (482)
+|+|++.-+..-...|++.-.
T Consensus 163 ~igDs~~d~~aa~~aG~~~i~ 183 (213)
T TIGR01449 163 YVGDSRVDIQAARAAGCPSVL 183 (213)
T ss_pred EeCCCHHHHHHHHHCCCeEEE
Confidence 999999877555556665543
No 47
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=96.98 E-value=0.00043 Score=64.16 Aligned_cols=91 Identities=22% Similarity=0.288 Sum_probs=71.9
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEccccee----eC---CceeecccccCCCCC
Q 011589 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF----SD---GTYTKDLTVLGVDLA 414 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~----~~---g~yiKDLs~LGRdLs 414 (482)
+...||+.++|++|. +.++|.|++...++..+++.++..+ +|+..+..+.... .+ ..|.+-++++|.+++
T Consensus 83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~~-~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 159 (184)
T TIGR01993 83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIED-CFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE 159 (184)
T ss_pred CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcHh-hhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence 456799999999998 6899999999999999999997654 8888887655432 12 256677788899999
Q ss_pred cEEEEECChhhhccCCCceee
Q 011589 415 KVAIIDNSPQVFRLQVNNGIP 435 (482)
Q Consensus 415 ~VIIVDDsp~~~~~qp~NgIp 435 (482)
++++|+|++.........|+.
T Consensus 160 ~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 160 RAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred ceEEEeCCHHHHHHHHHcCCE
Confidence 999999999766554455654
No 48
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.96 E-value=0.0022 Score=63.80 Aligned_cols=130 Identities=12% Similarity=0.119 Sum_probs=74.0
Q ss_pred CCCceEEEEecCcccccccccc-cCCCCceEEE--Eecc--------eeceEEEeeCchHHHHHHHhh-cceEEEEEcC-
Q 011589 300 GRKSVTLVLDLDETLVHSTLEY-CDDADFTFTV--FFNM--------KEHTVYVKQRPHLKTFLERVA-EMFEVVIFTA- 366 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~-~~~~df~~~v--~~~~--------~~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTA- 366 (482)
.++++.+++|+|||+++++... .....|.-.. .+.. .....+....||+.+||+++. +.++|++-|+
T Consensus 60 ~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR 139 (237)
T PRK11009 60 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGR 139 (237)
T ss_pred CCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4556799999999999975211 0111110000 0000 001234556667999999995 6799999998
Q ss_pred ---CcHHHHHHHHHHhCC-CCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceee
Q 011589 367 ---SQSIYAAQLLDILDP-DGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 435 (482)
Q Consensus 367 ---s~k~YA~~ILd~LDP-~~klfs~RLyRe~C~~~~g~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~NgIp 435 (482)
....+++.+++.+.. ...+|...+..+.. .+..-..-+. ...-+|+|-|+..-+......|+.
T Consensus 140 ~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~K~~K~~~l~----~~~i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 140 TATKTETVSKTLADDFHIPADNMNPVIFAGDKP--GQYTKTQWLK----KKNIRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--CCCCHHHHHH----hcCCeEEEcCCHHHHHHHHHcCCc
Confidence 456789999987765 23366555544431 1110011111 222388899998766444445554
No 49
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=96.95 E-value=0.00057 Score=65.94 Aligned_cols=93 Identities=17% Similarity=0.155 Sum_probs=72.3
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEE
Q 011589 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VI 417 (482)
...-||+.+.|..++ +.|.+.|.|+.....++.+++.++-.. +|..++..+.....+. ....-+..+|.+++++|
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~-~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD-YFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc-ccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 467899999999999 558999999999999999999998876 7877776333333332 33455667788877999
Q ss_pred EEECChhhhccCCCceee
Q 011589 418 IIDNSPQVFRLQVNNGIP 435 (482)
Q Consensus 418 IVDDsp~~~~~qp~NgIp 435 (482)
+|=|+..-.......|++
T Consensus 167 ~VGDs~~Di~aA~~Ag~~ 184 (220)
T COG0546 167 MVGDSLNDILAAKAAGVP 184 (220)
T ss_pred EECCCHHHHHHHHHcCCC
Confidence 999999877665556655
No 50
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=96.89 E-value=0.00056 Score=67.45 Aligned_cols=86 Identities=22% Similarity=0.331 Sum_probs=69.3
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEccc---------ceeeCCceeecccccCCC
Q 011589 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRES---------CIFSDGTYTKDLTVLGVD 412 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~---------C~~~~g~yiKDLs~LGRd 412 (482)
++.-|-|++||-.|.+.+ .++||.+.+..|..+|++|.... .|...++.+- |......|.|-.+..|.+
T Consensus 99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieD-cFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~ 176 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIED-CFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID 176 (244)
T ss_pred cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHH-hccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC
Confidence 677788999999999888 89999999999999999999886 7888877442 222234566667777886
Q ss_pred -CCcEEEEECChhhhccC
Q 011589 413 -LAKVAIIDNSPQVFRLQ 429 (482)
Q Consensus 413 -Ls~VIIVDDsp~~~~~q 429 (482)
++||+++||+.......
T Consensus 177 ~p~~t~FfDDS~~NI~~a 194 (244)
T KOG3109|consen 177 SPRNTYFFDDSERNIQTA 194 (244)
T ss_pred CcCceEEEcCchhhHHHH
Confidence 99999999999877543
No 51
>PRK09449 dUMP phosphatase; Provisional
Probab=96.85 E-value=0.00093 Score=63.59 Aligned_cols=92 Identities=15% Similarity=0.149 Sum_probs=72.4
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCC-CCCcEE
Q 011589 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGV-DLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGR-dLs~VI 417 (482)
+...||+.++|++|.+.|.++|.|++...+++.+++.+...+ +|...+..+++...+. .|.+-++.+|. +.++++
T Consensus 94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~ 172 (224)
T PRK09449 94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRD-YFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVL 172 (224)
T ss_pred CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHH-HcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 567899999999999889999999999999999999987765 7988888777654433 56677788885 457899
Q ss_pred EEECChh-hhccCCCcee
Q 011589 418 IIDNSPQ-VFRLQVNNGI 434 (482)
Q Consensus 418 IVDDsp~-~~~~qp~NgI 434 (482)
+|+|++. -.......|+
T Consensus 173 ~vgD~~~~Di~~A~~aG~ 190 (224)
T PRK09449 173 MVGDNLHSDILGGINAGI 190 (224)
T ss_pred EEcCCcHHHHHHHHHCCC
Confidence 9999973 4433334454
No 52
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=96.83 E-value=0.00071 Score=65.26 Aligned_cols=49 Identities=20% Similarity=0.314 Sum_probs=43.2
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEE
Q 011589 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY 391 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLy 391 (482)
+.++||+.+||+++.+.+.++|-|++...+++++++.+.-.. +|..++-
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~-~~an~l~ 115 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLE 115 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCch-hhceeeE
Confidence 578999999999999888999999999999999999998764 6765554
No 53
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=96.81 E-value=0.00088 Score=63.16 Aligned_cols=100 Identities=14% Similarity=0.146 Sum_probs=76.0
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEE
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VI 417 (482)
...+||+.++|+++.+ .|.++|.|.+....+..++.....-..+|...+..+++...+. .|.+-++.+|.++++++
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 162 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAV 162 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeE
Confidence 4579999999999985 6999999999988776655442222347888888776655443 56677888999999999
Q ss_pred EEECChhhhccCCCceeeeccccC
Q 011589 418 IIDNSPQVFRLQVNNGIPIESWFD 441 (482)
Q Consensus 418 IVDDsp~~~~~qp~NgIpI~~w~g 441 (482)
+|||++.........|+..--+.+
T Consensus 163 ~vgD~~~di~aA~~aG~~~i~~~~ 186 (199)
T PRK09456 163 FFDDNADNIEAANALGITSILVTD 186 (199)
T ss_pred EeCCCHHHHHHHHHcCCEEEEecC
Confidence 999999877666667887655544
No 54
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.81 E-value=0.0033 Score=56.93 Aligned_cols=84 Identities=24% Similarity=0.247 Sum_probs=58.4
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHh-hcceEEEEEcCCcHHHHH---------
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERV-AEMFEVVIFTASQSIYAA--------- 373 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~L-sk~YEIvIfTAs~k~YA~--------- 373 (482)
+.+++||||||+..... .+. .....|.+.+.|+++ .+.++|+++|+-......
T Consensus 2 K~i~~DiDGTL~~~~~~-----~y~------------~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~ 64 (126)
T TIGR01689 2 KRLVMDLDNTITLTENG-----DYA------------NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIH 64 (126)
T ss_pred CEEEEeCCCCcccCCCC-----ccc------------ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchh
Confidence 37899999999754210 000 134678999999998 467999999999888876
Q ss_pred ---HHHHHhCCCCCeeeeEEEcc-cceeeCCceeec
Q 011589 374 ---QLLDILDPDGKLISRRVYRE-SCIFSDGTYTKD 405 (482)
Q Consensus 374 ---~ILd~LDP~~klfs~RLyRe-~C~~~~g~yiKD 405 (482)
.+++.|+-.+-.+...+.|. .|. ..|.|+.|
T Consensus 65 ~~~~t~~wL~k~~ipYd~l~~~kp~~~-~~~~~~dD 99 (126)
T TIGR01689 65 TLPIIILWLNQHNVPYDEIYVGKPWCG-HDGFYVDD 99 (126)
T ss_pred hHHHHHHHHHHcCCCCceEEeCCCcCC-CCCceecc
Confidence 77888888775566666654 452 34455443
No 55
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.75 E-value=0.0015 Score=62.49 Aligned_cols=99 Identities=14% Similarity=0.081 Sum_probs=79.4
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEE
Q 011589 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VI 417 (482)
..+.||+.++|++++ +.|.++|.|++...+++.+++.+.-.+ +|...+.++.....+. .|.+-++.+|.++++++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD-YFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh-cccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 567899999999998 559999999999999999999988765 7888777765433332 56677788899999999
Q ss_pred EEECChhhhccCCCceeeeccccC
Q 011589 418 IIDNSPQVFRLQVNNGIPIESWFD 441 (482)
Q Consensus 418 IVDDsp~~~~~qp~NgIpI~~w~g 441 (482)
+|+|++.-.......|++.--...
T Consensus 170 ~igDs~~Di~aA~~aG~~~i~v~~ 193 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRSIVVPA 193 (222)
T ss_pred EEcCChhhHHHHHHcCCEEEEecC
Confidence 999999877666667776654443
No 56
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=96.75 E-value=0.0017 Score=59.70 Aligned_cols=111 Identities=18% Similarity=0.154 Sum_probs=73.8
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCC
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD 382 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~ 382 (482)
+.++||+||||+..... +..+ ....-++.++|+. -|++|.+ .+.++|.|+..+..+..+++.+...
T Consensus 2 ~~~~~D~Dgtl~~~~~~----------~~~~-~~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~ 68 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIY----------YTNN-GEEIKAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT 68 (154)
T ss_pred eEEEEeCceeEEcCeEE----------ECCC-CcEEEEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC
Confidence 47899999999853210 0011 1112235677776 6888874 6999999999999999999998765
Q ss_pred CCeeeeEEEcccceeeCC-ceeecccccCCCCCcEEEEECChhhhccCCCceee
Q 011589 383 GKLISRRVYRESCIFSDG-TYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 435 (482)
Q Consensus 383 ~klfs~RLyRe~C~~~~g-~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~NgIp 435 (482)
. +|... ..+. .+.+-+..+|.++++++.|-|+..-...-...|+.
T Consensus 69 ~-~~~~~-------~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~ 114 (154)
T TIGR01670 69 H-LYQGQ-------SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS 114 (154)
T ss_pred E-EEecc-------cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 3 45321 1122 23333466788899999999998766554444554
No 57
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.74 E-value=0.00085 Score=61.50 Aligned_cols=92 Identities=16% Similarity=0.194 Sum_probs=71.4
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEE
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VI 417 (482)
+...||+.++|+++.+ .+.++|-|++ .+++.+++.+.-.+ +|..++..+.....+. .|.+-++.+|..++++|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~-~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v 163 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTD-YFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV 163 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHH-HCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 6789999999999985 4899999988 78999999887654 7888877665543332 45566778899999999
Q ss_pred EEECChhhhccCCCceeee
Q 011589 418 IIDNSPQVFRLQVNNGIPI 436 (482)
Q Consensus 418 IVDDsp~~~~~qp~NgIpI 436 (482)
+|+|++.-......+|++.
T Consensus 164 ~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 164 VFEDALAGVQAARAAGMFA 182 (185)
T ss_pred EEeCcHhhHHHHHHCCCeE
Confidence 9999997776555566653
No 58
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=96.73 E-value=0.00096 Score=61.54 Aligned_cols=93 Identities=15% Similarity=0.174 Sum_probs=75.0
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEEE
Q 011589 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAI 418 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VII 418 (482)
+..-|++ +.|+++.+.+.++|-|++.+.+++.+++.+.-.+ +|...+..+++...+. .|.+-++++|.+++++|+
T Consensus 87 ~~~~~~~-e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~ 164 (188)
T PRK10725 87 VEPLPLI-EVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRR-YFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVV 164 (188)
T ss_pred CCCccHH-HHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHh-HceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 3456764 8999998779999999999999999999998765 8998888877654443 466777888999999999
Q ss_pred EECChhhhccCCCceeee
Q 011589 419 IDNSPQVFRLQVNNGIPI 436 (482)
Q Consensus 419 VDDsp~~~~~qp~NgIpI 436 (482)
|+|++.-+......|++.
T Consensus 165 igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 165 FEDADFGIQAARAAGMDA 182 (188)
T ss_pred EeccHhhHHHHHHCCCEE
Confidence 999998776665666654
No 59
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.67 E-value=0.0018 Score=68.58 Aligned_cols=97 Identities=10% Similarity=0.106 Sum_probs=79.8
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEE
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VI 417 (482)
+.+.||+.+||++|.+ .+.++|-|++.+.+++.+++.++-.+ ||+..+..+++...+. .|.+-+..+|..++++|
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~-yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl 293 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG-FFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI 293 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH-HceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 4678999999999985 59999999999999999999998765 8999988887754443 56778888999999999
Q ss_pred EEECChhhhccCCCceeeeccc
Q 011589 418 IIDNSPQVFRLQVNNGIPIESW 439 (482)
Q Consensus 418 IVDDsp~~~~~qp~NgIpI~~w 439 (482)
+|+|++.-.......|+..-..
T Consensus 294 ~IGDS~~DIeAAk~AGm~~IgV 315 (381)
T PLN02575 294 VFGNSNQTVEAAHDARMKCVAV 315 (381)
T ss_pred EEcCCHHHHHHHHHcCCEEEEE
Confidence 9999998776655566554443
No 60
>PLN02954 phosphoserine phosphatase
Probab=96.63 E-value=0.00078 Score=64.14 Aligned_cols=92 Identities=9% Similarity=0.142 Sum_probs=60.6
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCC-CeeeeEEEccc-------------cee-eCCceeec
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDG-KLISRRVYRES-------------CIF-SDGTYTKD 405 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~-klfs~RLyRe~-------------C~~-~~g~yiKD 405 (482)
..++||+.++|+++.+ .+.++|-|++.+.+++.+++.++-.. .+|..++.-+. |.. .+...++.
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~ 162 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH 162 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence 4578999999999975 58999999999999999999987653 36655443111 100 01111111
Q ss_pred -ccccCCCCCcEEEEECChhhhccCCCceee
Q 011589 406 -LTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 435 (482)
Q Consensus 406 -Ls~LGRdLs~VIIVDDsp~~~~~qp~NgIp 435 (482)
+..+| .+++|.|-|++.-......+|+.
T Consensus 163 ~~~~~~--~~~~i~iGDs~~Di~aa~~~~~~ 191 (224)
T PLN02954 163 IKKKHG--YKTMVMIGDGATDLEARKPGGAD 191 (224)
T ss_pred HHHHcC--CCceEEEeCCHHHHHhhhcCCCC
Confidence 12233 46899999999877664444444
No 61
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.58 E-value=0.0024 Score=62.39 Aligned_cols=98 Identities=12% Similarity=0.024 Sum_probs=76.3
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCC-CCCcE
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGV-DLAKV 416 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGR-dLs~V 416 (482)
+.+.||+.++|++|++ .+.++|-|++.+.+++.+++.+...+.+|...+..+.....+. .|.+-++++|. +++++
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~ 177 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAAC 177 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchhe
Confidence 5678999999999985 5999999999999999999999877632466666665443332 56777788897 48999
Q ss_pred EEEECChhhhccCCCceeeeccc
Q 011589 417 AIIDNSPQVFRLQVNNGIPIESW 439 (482)
Q Consensus 417 IIVDDsp~~~~~qp~NgIpI~~w 439 (482)
|+|.|++.-+......|+..-..
T Consensus 178 l~IGDs~~Di~aA~~aGi~~i~v 200 (253)
T TIGR01422 178 VKVGDTVPDIEEGRNAGMWTVGL 200 (253)
T ss_pred EEECCcHHHHHHHHHCCCeEEEE
Confidence 99999998776665667665543
No 62
>PRK11587 putative phosphatase; Provisional
Probab=96.55 E-value=0.0037 Score=59.76 Aligned_cols=97 Identities=12% Similarity=0.075 Sum_probs=74.1
Q ss_pred EEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcE
Q 011589 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKV 416 (482)
Q Consensus 341 yV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~V 416 (482)
.+.+.||+.++|++|. +.+.++|-|++...++..+++...-. +|...+..++....+. .|.+-+..+|..++++
T Consensus 81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~ 158 (218)
T PRK11587 81 GITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP--APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQEC 158 (218)
T ss_pred CceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC--CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccE
Confidence 3577999999999997 56999999999999888888876652 4556666655443332 5677788899999999
Q ss_pred EEEECChhhhccCCCceeeeccc
Q 011589 417 AIIDNSPQVFRLQVNNGIPIESW 439 (482)
Q Consensus 417 IIVDDsp~~~~~qp~NgIpI~~w 439 (482)
|+|+|++.-.......|++.--+
T Consensus 159 l~igDs~~di~aA~~aG~~~i~v 181 (218)
T PRK11587 159 VVVEDAPAGVLSGLAAGCHVIAV 181 (218)
T ss_pred EEEecchhhhHHHHHCCCEEEEE
Confidence 99999998776655667654443
No 63
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=96.47 E-value=0.0054 Score=67.55 Aligned_cols=109 Identities=12% Similarity=0.155 Sum_probs=71.8
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcH----------
Q 011589 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQS---------- 369 (482)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k---------- 369 (482)
.+.+++.||+||||+...... .| ...... +..+-||+.+.|++|.+ .|.|+|+|....
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~----~~------~~~~~d-~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~ 234 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGK----VF------PKGPDD-WQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADD 234 (526)
T ss_pred ccCcEEEEECCCCccccCCCc----cC------CCCHHH-eeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHH
Confidence 345799999999999753110 00 001111 22346999999999985 599999999766
Q ss_pred --HHHHHHHHHhCCCCCeeeeEEEcccceeeC---Cceeeccccc----CCCCCcEEEEECCh
Q 011589 370 --IYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVL----GVDLAKVAIIDNSP 423 (482)
Q Consensus 370 --~YA~~ILd~LDP~~klfs~RLyRe~C~~~~---g~yiKDLs~L----GRdLs~VIIVDDsp 423 (482)
..+..+++.++. .|...+..+.|.+.+ |.+..-+..+ +.+++++++|-|+.
T Consensus 235 ~~~ki~~iL~~lgi---pfdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaa 294 (526)
T TIGR01663 235 FKAKIEAIVAKLGV---PFQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAA 294 (526)
T ss_pred HHHHHHHHHHHcCC---ceEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcc
Confidence 468888888875 366544455555443 2333222333 57899999999997
No 64
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.45 E-value=0.0032 Score=60.92 Aligned_cols=95 Identities=12% Similarity=0.036 Sum_probs=74.4
Q ss_pred EEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcE
Q 011589 341 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKV 416 (482)
Q Consensus 341 yV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~V 416 (482)
.+.+.||+.++|++|++ .+.++|.|++...++..+++.++-.+ +|...+..+.+...+. .|.+-++++|.+++++
T Consensus 93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~ 171 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQ-RCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDC 171 (229)
T ss_pred cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchh-cccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhE
Confidence 36789999999999985 48999999999999999999987654 6776666665443332 4667778889999999
Q ss_pred EEEECChhhhccCCCceeee
Q 011589 417 AIIDNSPQVFRLQVNNGIPI 436 (482)
Q Consensus 417 IIVDDsp~~~~~qp~NgIpI 436 (482)
++|+|++.-.......|+..
T Consensus 172 l~IGDs~~Di~aA~~aG~~~ 191 (229)
T PRK13226 172 VYVGDDERDILAARAAGMPS 191 (229)
T ss_pred EEeCCCHHHHHHHHHCCCcE
Confidence 99999997665544556554
No 65
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=96.37 E-value=0.0038 Score=59.06 Aligned_cols=92 Identities=16% Similarity=0.186 Sum_probs=70.5
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEE
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VI 417 (482)
...+||+.+||+.+.+ .+.++|.|.+...++..+++.++-.+ +|...+..+.....+. .+.+-++.++.+.++++
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i 170 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIAD-YFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEML 170 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCcc-CccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheE
Confidence 6689999999999985 59999999999999999999987754 6766555544322221 34556677888999999
Q ss_pred EEECChhhhccCCCcee
Q 011589 418 IIDNSPQVFRLQVNNGI 434 (482)
Q Consensus 418 IVDDsp~~~~~qp~NgI 434 (482)
+|+|++.-...-...|+
T Consensus 171 ~igD~~~Di~~a~~~g~ 187 (226)
T PRK13222 171 FVGDSRNDIQAARAAGC 187 (226)
T ss_pred EECCCHHHHHHHHHCCC
Confidence 99999876655444555
No 66
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=96.20 E-value=0.0015 Score=67.49 Aligned_cols=95 Identities=15% Similarity=0.203 Sum_probs=65.5
Q ss_pred EeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEccc----------cee--eCCceeec-cc
Q 011589 342 VKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRES----------CIF--SDGTYTKD-LT 407 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~----------C~~--~~g~yiKD-Ls 407 (482)
+.++||+.++|+++.+. +.++|.|++...+++.+++.++-.. .+...+--.. +.. .+...++. ++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~-~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA-AVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe-EEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 67899999999999955 9999999999999999999987654 3333332110 000 11122222 24
Q ss_pred ccCCCCCcEEEEECChhhhccCCCceeeec
Q 011589 408 VLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 437 (482)
Q Consensus 408 ~LGRdLs~VIIVDDsp~~~~~qp~NgIpI~ 437 (482)
.+|.+++++|.|-|+..-..+-..-|+.|-
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA 288 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIA 288 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHHCCCeEE
Confidence 678899999999999976655444455553
No 67
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=96.17 E-value=0.0087 Score=55.42 Aligned_cols=94 Identities=14% Similarity=0.150 Sum_probs=66.0
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC-c------------eeeccc
Q 011589 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG-T------------YTKDLT 407 (482)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g-~------------yiKDLs 407 (482)
+.++||+.++|+++. +.+.++|.|++...+++.+++.+.... +|...+..+......+ . +.+-+.
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 678999999999998 469999999999999999999998654 6666554322111111 1 111134
Q ss_pred ccCCCCCcEEEEECChhhhccCCCceeee
Q 011589 408 VLGVDLAKVAIIDNSPQVFRLQVNNGIPI 436 (482)
Q Consensus 408 ~LGRdLs~VIIVDDsp~~~~~qp~NgIpI 436 (482)
.+|.+++++++|.|+..-...-...|+++
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~ 186 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISI 186 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeE
Confidence 46778899999999986554433445544
No 68
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=96.16 E-value=0.0027 Score=60.48 Aligned_cols=95 Identities=7% Similarity=0.069 Sum_probs=73.5
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCeee-eEEEcccceeeC---CceeecccccCCCCCcEE
Q 011589 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLIS-RRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~LDP~~klfs-~RLyRe~C~~~~---g~yiKDLs~LGRdLs~VI 417 (482)
+...||+.++|+++. +.++|.|++.+.+++.+++.++-.. +|. ..+..++....+ ..|.+-++++|..++++|
T Consensus 87 ~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~-~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 87 LEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLH-YFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI 163 (221)
T ss_pred CCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHH-hCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 567899999999994 8999999999999999999887765 675 455554443333 256677788899999999
Q ss_pred EEECChhhhccCCCceeeeccc
Q 011589 418 IIDNSPQVFRLQVNNGIPIESW 439 (482)
Q Consensus 418 IVDDsp~~~~~qp~NgIpI~~w 439 (482)
+|+|++.-.......|+++--+
T Consensus 164 ~igDs~~di~aA~~aG~~~i~~ 185 (221)
T PRK10563 164 LVDDSSAGAQSGIAAGMEVFYF 185 (221)
T ss_pred EEeCcHhhHHHHHHCCCEEEEE
Confidence 9999998776655667666533
No 69
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.15 E-value=0.007 Score=57.22 Aligned_cols=84 Identities=14% Similarity=0.122 Sum_probs=73.5
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEEE
Q 011589 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAI 418 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VII 418 (482)
+...|++.++|+.+.+.|.++|.|.|...++...+..+. -..+|...++.+.....+. .|..-++.+|-+++++++
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~g-l~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~ 176 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLG-LLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALF 176 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcC-ChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEE
Confidence 678899999999999889999999999999999999998 4458999999888775543 567778889999999999
Q ss_pred EECChhhh
Q 011589 419 IDNSPQVF 426 (482)
Q Consensus 419 VDDsp~~~ 426 (482)
|||+...-
T Consensus 177 VgD~~~~d 184 (229)
T COG1011 177 VGDSLEND 184 (229)
T ss_pred ECCChhhh
Confidence 99999766
No 70
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.11 E-value=0.0079 Score=59.48 Aligned_cols=97 Identities=12% Similarity=0.067 Sum_probs=74.5
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeC---CceeecccccCCC-CCcE
Q 011589 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVD-LAKV 416 (482)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~---g~yiKDLs~LGRd-Ls~V 416 (482)
+.+-||+.++|++|. +.+.++|-|++.+..+..+++.+.-.+-+|...+..++....+ ..|.+-++.+|.. ++.+
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~ 179 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC 179 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence 567899999999997 4599999999999999999998776653346666676654333 2566777888875 6899
Q ss_pred EEEECChhhhccCCCceeeecc
Q 011589 417 AIIDNSPQVFRLQVNNGIPIES 438 (482)
Q Consensus 417 IIVDDsp~~~~~qp~NgIpI~~ 438 (482)
|+|.|++.-+......|++.-.
T Consensus 180 l~IGDs~~Di~aA~~aG~~~i~ 201 (267)
T PRK13478 180 VKVDDTVPGIEEGLNAGMWTVG 201 (267)
T ss_pred EEEcCcHHHHHHHHHCCCEEEE
Confidence 9999999877665566765443
No 71
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.09 E-value=0.0059 Score=61.09 Aligned_cols=93 Identities=13% Similarity=0.137 Sum_probs=72.3
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEE
Q 011589 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VI 417 (482)
+..+||+.++|+++. +.+.++|.|.+...++..+++.++-.+ +|...+..+.+...+. .|.+-++.+|.+++++|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~-~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGR-YFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL 178 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHh-hCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence 457899999999998 469999999999999999999987654 7877666654432222 34555677899999999
Q ss_pred EEECChhhhccCCCceee
Q 011589 418 IIDNSPQVFRLQVNNGIP 435 (482)
Q Consensus 418 IVDDsp~~~~~qp~NgIp 435 (482)
+|+|++.-...-..+|+.
T Consensus 179 ~IGD~~~Di~aA~~aGi~ 196 (272)
T PRK13223 179 FVGDSRSDVLAAKAAGVQ 196 (272)
T ss_pred EECCCHHHHHHHHHCCCe
Confidence 999999877665556764
No 72
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.08 E-value=0.0057 Score=58.06 Aligned_cols=95 Identities=16% Similarity=0.169 Sum_probs=73.7
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCC-CeeeeEEEcccceeeC---CceeecccccCCC-CCc
Q 011589 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRVYRESCIFSD---GTYTKDLTVLGVD-LAK 415 (482)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~-klfs~RLyRe~C~~~~---g~yiKDLs~LGRd-Ls~ 415 (482)
+.+.||+.+||++|+ +.|.++|-|++...++..+++.++... .+|...+..+.-...+ ..|.+-+.++|.. +++
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 468999999999997 679999999999999999999988652 5888777765432222 2455667788876 799
Q ss_pred EEEEECChhhhccCCCceeee
Q 011589 416 VAIIDNSPQVFRLQVNNGIPI 436 (482)
Q Consensus 416 VIIVDDsp~~~~~qp~NgIpI 436 (482)
+++|+|++.-.......|++.
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCe
Confidence 999999997665555566664
No 73
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.04 E-value=0.0072 Score=61.07 Aligned_cols=97 Identities=12% Similarity=0.167 Sum_probs=71.0
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCC--CCeeeeEEEcccceeeCC---ceeecccccCCCCCc
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD--GKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAK 415 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~--~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~ 415 (482)
+.+.||+.++|+++.+ .+.++|.|++...++..+++.+.-. ..+|... ..+.+...+. .|.+-++.+|.++++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 4789999999999985 6999999999999999999876321 1223322 4444433222 456677788999999
Q ss_pred EEEEECChhhhccCCCceeeeccc
Q 011589 416 VAIIDNSPQVFRLQVNNGIPIESW 439 (482)
Q Consensus 416 VIIVDDsp~~~~~qp~NgIpI~~w 439 (482)
+|+|+|++.-+.....+|+..-..
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v 245 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVT 245 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEE
Confidence 999999998776655667665544
No 74
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=95.98 E-value=0.0027 Score=59.95 Aligned_cols=98 Identities=18% Similarity=0.109 Sum_probs=69.2
Q ss_pred EEeeCchHHHHHHHhhc-ceEEEEEcCCcHHH--HHHHHHHhCCCCCeeeeEEEcccceeeC---CceeecccccCCCCC
Q 011589 341 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIY--AAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLA 414 (482)
Q Consensus 341 yV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~Y--A~~ILd~LDP~~klfs~RLyRe~C~~~~---g~yiKDLs~LGRdLs 414 (482)
.+.+.||+.++|++|.+ .|.++|.|++...+ +...+..+... .+|...+..+.....+ ..|.+-++++|.+++
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~-~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIM-ALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhH-hhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 35678999999999985 59999999987654 32223222222 3687777655543333 256677788999999
Q ss_pred cEEEEECChhhhccCCCceeeeccc
Q 011589 415 KVAIIDNSPQVFRLQVNNGIPIESW 439 (482)
Q Consensus 415 ~VIIVDDsp~~~~~qp~NgIpI~~w 439 (482)
++++|||++.........|+..--+
T Consensus 171 ~~l~i~D~~~di~aA~~aG~~~i~v 195 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAALGITTIKV 195 (211)
T ss_pred HeEEEcCCHHHHHHHHHcCCEEEEE
Confidence 9999999998776665667765443
No 75
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=95.96 E-value=0.006 Score=57.18 Aligned_cols=91 Identities=14% Similarity=0.084 Sum_probs=67.1
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEE
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VI 417 (482)
+.+.||+.++|++|++ .|.++|.|++...+ ..+++.+.-.+ +|...+..+.+...+. .|.+-++.+|.+++++|
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 181 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEALGLLE-YFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEAL 181 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHHCCcHH-hcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEE
Confidence 3568999999999985 59999999988764 77888876654 7888777666544433 46677788899999999
Q ss_pred EEECCh-hhhccCCCcee
Q 011589 418 IIDNSP-QVFRLQVNNGI 434 (482)
Q Consensus 418 IVDDsp-~~~~~qp~NgI 434 (482)
+|+|++ .-.......|+
T Consensus 182 ~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 182 HIGDSLRNDYQGARAAGW 199 (203)
T ss_pred EECCCchHHHHHHHHcCC
Confidence 999997 33433323443
No 76
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.93 E-value=0.0062 Score=61.64 Aligned_cols=93 Identities=15% Similarity=0.125 Sum_probs=55.7
Q ss_pred CCceEEEEecCccccccccc----ccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHH
Q 011589 301 RKSVTLVLDLDETLVHSTLE----YCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQL 375 (482)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~----~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~I 375 (482)
.+++.+|||||||+++.+.- ......|.- -.++.-........-||+.+||+++. +...++|.|.....+.+..
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~-~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDP-ETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCH-HHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHH
Confidence 45789999999999987621 111111100 00000001123556799999999997 5589999999886666644
Q ss_pred H---HHhCCCCCeeeeEEEccc
Q 011589 376 L---DILDPDGKLISRRVYRES 394 (482)
Q Consensus 376 L---d~LDP~~klfs~RLyRe~ 394 (482)
+ +.+......+.+.++|+.
T Consensus 152 ~~~Lkk~Gi~~~~~d~lllr~~ 173 (266)
T TIGR01533 152 LKNLKRFGFPQADEEHLLLKKD 173 (266)
T ss_pred HHHHHHcCcCCCCcceEEeCCC
Confidence 4 444443323466777753
No 77
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.89 E-value=0.0059 Score=55.92 Aligned_cols=92 Identities=15% Similarity=0.159 Sum_probs=67.9
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcEE
Q 011589 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~---g~yiKDLs~LGRdLs~VI 417 (482)
..+.||+.++|++|. +.+.++|-|.+. .+..+++.+.-.+ +|...+..++-...+ ..|.+-++++|.+++++|
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v 162 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLID-YFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECI 162 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHh-hCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 357899999999998 459999999764 3567888887664 788877654322222 246677788899999999
Q ss_pred EEECChhhhccCCCceeee
Q 011589 418 IIDNSPQVFRLQVNNGIPI 436 (482)
Q Consensus 418 IVDDsp~~~~~qp~NgIpI 436 (482)
+|+|++.-+.....+|++.
T Consensus 163 ~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 163 GIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred EEecCHHHHHHHHHcCCEE
Confidence 9999997766555566653
No 78
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.87 E-value=0.013 Score=57.36 Aligned_cols=95 Identities=11% Similarity=0.071 Sum_probs=62.6
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHH--HHHHHh
Q 011589 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAA--QLLDIL 379 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~--~ILd~L 379 (482)
-..+++|+||||.+.. ..-||+.++|++|.+ .+.++|.|++.+..++ +.++.+
T Consensus 8 ~~~~~~D~dG~l~~~~------------------------~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~ 63 (242)
T TIGR01459 8 YDVFLLDLWGVIIDGN------------------------HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL 63 (242)
T ss_pred CCEEEEecccccccCC------------------------ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC
Confidence 3478999999997652 246999999999984 6999999999988776 778888
Q ss_pred CCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECCh
Q 011589 380 DPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSP 423 (482)
Q Consensus 380 DP~~klfs~RLyRe~C~~~~g~yiKDLs~LGRdLs~VIIVDDsp 423 (482)
.....+|...+....... ..+..-++.+|...+++++|-|+.
T Consensus 64 gl~~~~~~~Ii~s~~~~~--~~l~~~~~~~~~~~~~~~~vGd~~ 105 (242)
T TIGR01459 64 GINADLPEMIISSGEIAV--QMILESKKRFDIRNGIIYLLGHLE 105 (242)
T ss_pred CCCccccceEEccHHHHH--HHHHhhhhhccCCCceEEEeCCcc
Confidence 765325666666443211 011111223344445566665544
No 79
>PLN02940 riboflavin kinase
Probab=95.83 E-value=0.0062 Score=64.18 Aligned_cols=95 Identities=11% Similarity=0.081 Sum_probs=75.4
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHH-HhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcE
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLD-ILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKV 416 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd-~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~V 416 (482)
+...||+.++|++|.+ .+.++|-|++.+.++..+++ .++-. .+|+..+..+++...+. .|.+-++.+|-.++++
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~ 170 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK-ESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNC 170 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHE
Confidence 5678999999999975 59999999999999999887 55544 48999998887654442 5677788889999999
Q ss_pred EEEECChhhhccCCCceeeec
Q 011589 417 AIIDNSPQVFRLQVNNGIPIE 437 (482)
Q Consensus 417 IIVDDsp~~~~~qp~NgIpI~ 437 (482)
|+|+|++.-.......|+..-
T Consensus 171 l~VGDs~~Di~aA~~aGi~~I 191 (382)
T PLN02940 171 LVIEDSLPGVMAGKAAGMEVI 191 (382)
T ss_pred EEEeCCHHHHHHHHHcCCEEE
Confidence 999999987655555566533
No 80
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=95.76 E-value=0.017 Score=54.22 Aligned_cols=81 Identities=16% Similarity=0.188 Sum_probs=65.0
Q ss_pred eCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEEEE
Q 011589 344 QRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAII 419 (482)
Q Consensus 344 lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VIIV 419 (482)
..|+..++|+.|.+ .+.++|.|++.+.+++.+++.+.-.+ +|...+..++... +. .+.+-++.+|.+++++|+|
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~v 184 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEI-LFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMV 184 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchh-hCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEE
Confidence 44566999999985 59999999999999999999998764 8888887665433 32 4566677889999999999
Q ss_pred ECChhhh
Q 011589 420 DNSPQVF 426 (482)
Q Consensus 420 DDsp~~~ 426 (482)
.|++.-.
T Consensus 185 GD~~~Di 191 (197)
T TIGR01548 185 GDTVDDI 191 (197)
T ss_pred eCCHHHH
Confidence 9998533
No 81
>PRK08238 hypothetical protein; Validated
Probab=95.76 E-value=0.011 Score=64.54 Aligned_cols=90 Identities=13% Similarity=0.079 Sum_probs=57.1
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC--ceeecccccCCCCCcEEE
Q 011589 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG--TYTKDLTVLGVDLAKVAI 418 (482)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g--~yiKDLs~LGRdLs~VII 418 (482)
...+|++.++|+++. +.+.++|-|++.+.+++++++.++- |+..+..+.....++ ...+-.+.++ .+.++.
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~y 144 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL----FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFDY 144 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCccccCCchHHHHHHHHhC--ccCeeE
Confidence 457899999999997 5699999999999999999999854 666665443221111 1111112233 244677
Q ss_pred EECChhhhc--cCCCceeeec
Q 011589 419 IDNSPQVFR--LQVNNGIPIE 437 (482)
Q Consensus 419 VDDsp~~~~--~qp~NgIpI~ 437 (482)
+-|+..-.. ..-+|.+.|.
T Consensus 145 vGDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 145 AGNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred ecCCHHHHHHHHhCCCeEEEC
Confidence 777774331 1334555554
No 82
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.74 E-value=0.02 Score=51.15 Aligned_cols=82 Identities=12% Similarity=0.062 Sum_probs=63.9
Q ss_pred EEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcE
Q 011589 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKV 416 (482)
Q Consensus 341 yV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~V 416 (482)
.....||+.++|+++. +.+.++|.|++.+..+..+++.+ - ..+|...+..++.. .+. .|.+-++.+|.+. ++
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l-~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~ 137 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-L-GDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EV 137 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-H-HhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CE
Confidence 3445699999999996 56999999999999999999996 2 34687777777654 332 4566677788888 99
Q ss_pred EEEECChhhh
Q 011589 417 AIIDNSPQVF 426 (482)
Q Consensus 417 IIVDDsp~~~ 426 (482)
++|.|++.-.
T Consensus 138 l~iGDs~~Di 147 (154)
T TIGR01549 138 LHVGDNLNDI 147 (154)
T ss_pred EEEeCCHHHH
Confidence 9999997543
No 83
>PHA02597 30.2 hypothetical protein; Provisional
Probab=95.74 E-value=0.0044 Score=58.02 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=66.1
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCC---CeeeeEEEcccceeeCCceeecccccCCCCCcEEE
Q 011589 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDG---KLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 418 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~LDP~~---klfs~RLyRe~C~~~~g~yiKDLs~LGRdLs~VII 418 (482)
+...||+.++|++|.+.+.+++-|++.......+++.+...+ .+|+..+..+........+.+-++.+| ++.+|+
T Consensus 73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~ 150 (197)
T PHA02597 73 LSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCF 150 (197)
T ss_pred ccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEE
Confidence 668999999999999878877777766655555666654332 245666665554322224445566778 678999
Q ss_pred EECChhhhccCCCc--eeeeccc
Q 011589 419 IDNSPQVFRLQVNN--GIPIESW 439 (482)
Q Consensus 419 VDDsp~~~~~qp~N--gIpI~~w 439 (482)
|||++........+ ||+.--+
T Consensus 151 vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 151 VDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred eCCCHHHHHHHHHHHcCCcEEEe
Confidence 99999988776667 7776544
No 84
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=95.71 E-value=0.014 Score=55.08 Aligned_cols=114 Identities=16% Similarity=0.146 Sum_probs=70.2
Q ss_pred CceEEEEecCccccccc-ccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHh
Q 011589 302 KSVTLVLDLDETLVHST-LEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 379 (482)
Q Consensus 302 kK~tLVLDLDeTLVhSs-~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~L 379 (482)
+.+.+|+|+||||+... +..... .....+.. |.+ .=++.+. +.++++|-|......+..+++.+
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~~-----------~~~~~~~~-~d~--~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~l 85 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNNG-----------EELKAFNV-RDG--YGIRCLLTSGIEVAIITGRKSKLVEDRMTTL 85 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCCC-----------CEEEEEec-cch--HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc
Confidence 46799999999999763 111110 11111111 222 1233333 67999999999999999999998
Q ss_pred CCCCCeeeeEEEcccceeeC-CceeecccccCCCCCcEEEEECChhhhccCCCceeeec
Q 011589 380 DPDGKLISRRVYRESCIFSD-GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 437 (482)
Q Consensus 380 DP~~klfs~RLyRe~C~~~~-g~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~NgIpI~ 437 (482)
.... +|. .+ ..+ ..+.+-+..+|.++++++.|-|+..-...-...|+.+.
T Consensus 86 gl~~-~f~------g~-~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~ 136 (183)
T PRK09484 86 GITH-LYQ------GQ-SNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA 136 (183)
T ss_pred CCce-eec------CC-CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe
Confidence 7653 442 11 111 12334456778899999999999876654434455543
No 85
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=95.59 E-value=0.037 Score=53.95 Aligned_cols=95 Identities=14% Similarity=0.244 Sum_probs=68.0
Q ss_pred EeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeC---Ccee----ec------cc
Q 011589 342 VKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYT----KD------LT 407 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~---g~yi----KD------Ls 407 (482)
+.++||+.+.++++.+. +.++|.|+|...++++|.+.|..+. .+..++-.+.-.+.. |..+ |. ++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~-~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDY-VVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCch-heeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 88999999999999955 9999999999999999999999886 567777655411111 1111 11 23
Q ss_pred ccCCCCCcEEEEECChhhhcc--CCCceeeec
Q 011589 408 VLGVDLAKVAIIDNSPQVFRL--QVNNGIPIE 437 (482)
Q Consensus 408 ~LGRdLs~VIIVDDsp~~~~~--qp~NgIpI~ 437 (482)
.+|.++++++-+=|+..-..+ .-+++|.+.
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n 186 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPMLEAAGLPIAVN 186 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC
Confidence 458888899999888865544 334555443
No 86
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=95.53 E-value=0.012 Score=57.79 Aligned_cols=94 Identities=12% Similarity=0.093 Sum_probs=68.3
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhC---CCCCeeeeEEEccccee-eCCceeecccccCCCCCcE
Q 011589 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD---PDGKLISRRVYRESCIF-SDGTYTKDLTVLGVDLAKV 416 (482)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LD---P~~klfs~RLyRe~C~~-~~g~yiKDLs~LGRdLs~V 416 (482)
..+.||+.++|+++. +.+.++|+|++...+...+++..+ -. .+|+..+....+.. ....|.+-++.+|.+++++
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~-~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e~ 172 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLT-PYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPREI 172 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchh-hhcceEEEeCcccCCCHHHHHHHHHHhCcChhHE
Confidence 567899999999997 569999999999999999888763 22 24554442111111 1126777788899999999
Q ss_pred EEEECChhhhccCCCceeee
Q 011589 417 AIIDNSPQVFRLQVNNGIPI 436 (482)
Q Consensus 417 IIVDDsp~~~~~qp~NgIpI 436 (482)
++|+|++.-.......|+..
T Consensus 173 lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 173 LFLSDIINELDAARKAGLHT 192 (220)
T ss_pred EEEeCCHHHHHHHHHcCCEE
Confidence 99999997665554556553
No 87
>PLN02811 hydrolase
Probab=95.49 E-value=0.0089 Score=57.34 Aligned_cols=97 Identities=13% Similarity=0.114 Sum_probs=69.4
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHH-HHHHhCCCCCeeeeEEEcc--cceeeC---CceeecccccC---C
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQ-LLDILDPDGKLISRRVYRE--SCIFSD---GTYTKDLTVLG---V 411 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~-ILd~LDP~~klfs~RLyRe--~C~~~~---g~yiKDLs~LG---R 411 (482)
+.+.||+.++|+.|++ .|.++|-|++.+.+... +++..... .+|...++.+ ++...+ ..|.+-+..+| .
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~-~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 155 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELF-SLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV 155 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHH-hhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence 4568999999999985 59999999998876554 33322222 3788888877 554333 25666667775 8
Q ss_pred CCCcEEEEECChhhhccCCCceeeeccc
Q 011589 412 DLAKVAIIDNSPQVFRLQVNNGIPIESW 439 (482)
Q Consensus 412 dLs~VIIVDDsp~~~~~qp~NgIpI~~w 439 (482)
.++++|+|+|++.-+......|++.--.
T Consensus 156 ~~~~~v~IgDs~~di~aA~~aG~~~i~v 183 (220)
T PLN02811 156 DPGKVLVFEDAPSGVEAAKNAGMSVVMV 183 (220)
T ss_pred CccceEEEeccHhhHHHHHHCCCeEEEE
Confidence 8999999999998776655666655543
No 88
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.04 E-value=0.033 Score=66.10 Aligned_cols=96 Identities=10% Similarity=0.106 Sum_probs=78.2
Q ss_pred eCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEEEE
Q 011589 344 QRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAII 419 (482)
Q Consensus 344 lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VIIV 419 (482)
..||+.+||++|. +.|.++|.|++...+++.+++.+.-...+|...+..+.+...+. .|.+-++++|.+++++|+|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I 241 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI 241 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence 5899999999998 55999999999999999999998765457888888777654443 5677788899999999999
Q ss_pred ECChhhhccCCCceeeeccc
Q 011589 420 DNSPQVFRLQVNNGIPIESW 439 (482)
Q Consensus 420 DDsp~~~~~qp~NgIpI~~w 439 (482)
+|++.-+......|+..-..
T Consensus 242 gDs~~Di~AA~~aGm~~I~v 261 (1057)
T PLN02919 242 EDALAGVQAARAAGMRCIAV 261 (1057)
T ss_pred cCCHHHHHHHHHcCCEEEEE
Confidence 99998776655666655443
No 89
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=95.02 E-value=0.052 Score=52.09 Aligned_cols=96 Identities=14% Similarity=0.101 Sum_probs=64.1
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEE--cccceeeC------------C-ceeec
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY--RESCIFSD------------G-TYTKD 405 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLy--Re~C~~~~------------g-~yiKD 405 (482)
+.++||+.+||+++.+ .+.++|.|++...|++.+++.+-+...++...+. .+...... | ...+-
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 6889999999999985 5999999999999999999987222224432221 11111100 0 12233
Q ss_pred ccccCCCCCcEEEEECChhhhccCCCceeeec
Q 011589 406 LTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 437 (482)
Q Consensus 406 Ls~LGRdLs~VIIVDDsp~~~~~qp~NgIpI~ 437 (482)
++.++....++|.|-|+..-...-...|+.+.
T Consensus 153 l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred HHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 44567777899999999987655445566443
No 90
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=94.53 E-value=0.0096 Score=54.37 Aligned_cols=77 Identities=13% Similarity=0.112 Sum_probs=62.8
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEEE
Q 011589 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAI 418 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VII 418 (482)
+..+||+.++|+. ++|.|++.+.++..+++.+.... +|...+..+.....+. .|.+-++++|.+++++++
T Consensus 89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~ 161 (175)
T TIGR01493 89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLPW-YFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM 161 (175)
T ss_pred CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCHH-HHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence 5579999999994 78999999999999999987654 7888777765444433 567788889999999999
Q ss_pred EECChhh
Q 011589 419 IDNSPQV 425 (482)
Q Consensus 419 VDDsp~~ 425 (482)
|+|++.-
T Consensus 162 vgD~~~D 168 (175)
T TIGR01493 162 VAAHQWD 168 (175)
T ss_pred EecChhh
Confidence 9999743
No 91
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=94.51 E-value=0.11 Score=51.74 Aligned_cols=58 Identities=21% Similarity=0.181 Sum_probs=47.2
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCC
Q 011589 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDP 381 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~LDP 381 (482)
.+.+++||||||+.... ...|...+.|+++.+. +.++|-|.-....+..+++.++.
T Consensus 4 ~kli~~DlDGTLl~~~~-----------------------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l 60 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHT-----------------------YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGL 60 (273)
T ss_pred ceEEEEcCcccCcCCCC-----------------------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 46899999999997420 1357788999999864 89999999999999999999875
Q ss_pred CC
Q 011589 382 DG 383 (482)
Q Consensus 382 ~~ 383 (482)
..
T Consensus 61 ~~ 62 (273)
T PRK00192 61 ED 62 (273)
T ss_pred CC
Confidence 43
No 92
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=94.45 E-value=0.11 Score=50.85 Aligned_cols=58 Identities=31% Similarity=0.340 Sum_probs=50.4
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCC
Q 011589 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP 381 (482)
.+.|++||||||+.... ..+|...+.|+++. +.+.++|-|...-..+.++++.|..
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~ 59 (264)
T COG0561 3 IKLLAFDLDGTLLDSNK-----------------------TISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGL 59 (264)
T ss_pred eeEEEEcCCCCccCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCC
Confidence 57899999999998741 15788999999885 7799999999999999999999998
Q ss_pred CC
Q 011589 382 DG 383 (482)
Q Consensus 382 ~~ 383 (482)
.+
T Consensus 60 ~~ 61 (264)
T COG0561 60 DG 61 (264)
T ss_pred Cc
Confidence 76
No 93
>PTZ00445 p36-lilke protein; Provisional
Probab=94.30 E-value=0.026 Score=55.76 Aligned_cols=128 Identities=16% Similarity=0.177 Sum_probs=78.2
Q ss_pred CCCceEEEEecCccccc--cc--ccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHH---
Q 011589 300 GRKSVTLVLDLDETLVH--ST--LEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIY--- 371 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVh--Ss--~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~Y--- 371 (482)
..+-+.+++|||.|||- |- |.+. .....+.-..||.+..++++|.+ .+.|+|-|-+.+.-
T Consensus 40 ~~GIk~Va~D~DnTlI~~HsgG~~~~~------------~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~ 107 (219)
T PTZ00445 40 ECGIKVIASDFDLTMITKHSGGYIDPD------------NDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPS 107 (219)
T ss_pred HcCCeEEEecchhhhhhhhcccccCCC------------cchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccc
Confidence 45677999999999975 32 1111 01122345679999999999985 59999999998854
Q ss_pred ------------HHHHHHHhCCCCCeeee------EEEcccceee-----C---Cc--e--eecccccCCCCCcEEEEEC
Q 011589 372 ------------AAQLLDILDPDGKLISR------RVYRESCIFS-----D---GT--Y--TKDLTVLGVDLAKVAIIDN 421 (482)
Q Consensus 372 ------------A~~ILd~LDP~~klfs~------RLyRe~C~~~-----~---g~--y--iKDLs~LGRdLs~VIIVDD 421 (482)
+...|+.=.-.-+ +.. +++++.-.+. + +. | .+=+++.|.+++.+++|||
T Consensus 108 ~~~~~~Isg~~li~~~lk~s~~~~~-i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD 186 (219)
T PTZ00445 108 ENRPRYISGDRMVEAALKKSKCDFK-IKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDD 186 (219)
T ss_pred cCCcceechHHHHHHHHHhcCccce-eeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecC
Confidence 4444443221111 111 1222221111 1 12 3 4445667999999999999
Q ss_pred ChhhhccCCCceeeecccc
Q 011589 422 SPQVFRLQVNNGIPIESWF 440 (482)
Q Consensus 422 sp~~~~~qp~NgIpI~~w~ 440 (482)
++........-|+..--+.
T Consensus 187 ~~~NVeaA~~lGi~ai~f~ 205 (219)
T PTZ00445 187 DMNNCKNALKEGYIALHVT 205 (219)
T ss_pred CHHHHHHHHHCCCEEEEcC
Confidence 9998866555566554443
No 94
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=94.26 E-value=0.043 Score=58.87 Aligned_cols=92 Identities=13% Similarity=0.172 Sum_probs=68.7
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEccccee-eC-CceeecccccCCCCCcEEE
Q 011589 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF-SD-GTYTKDLTVLGVDLAKVAI 418 (482)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~-~~-g~yiKDLs~LGRdLs~VII 418 (482)
+.++||+.++|+++. +.+.+.|.|++.+.++..+++.++-.. +|...+..+.... .+ ..|.+-++.+ +++++|+
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~-~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v~ 405 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ-WVTETFSIEQINSLNKSDLVKSILNKY--DIKEAAV 405 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh-hcceeEecCCCCCCCCcHHHHHHHHhc--CcceEEE
Confidence 567899999999998 569999999999999999999988765 7888777665321 11 1333444444 3588999
Q ss_pred EECChhhhccCCCceeee
Q 011589 419 IDNSPQVFRLQVNNGIPI 436 (482)
Q Consensus 419 VDDsp~~~~~qp~NgIpI 436 (482)
|.|++.-+......|+..
T Consensus 406 VGDs~~Di~aAk~AG~~~ 423 (459)
T PRK06698 406 VGDRLSDINAAKDNGLIA 423 (459)
T ss_pred EeCCHHHHHHHHHCCCeE
Confidence 999997665555566543
No 95
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=94.21 E-value=0.051 Score=52.28 Aligned_cols=126 Identities=18% Similarity=0.261 Sum_probs=82.8
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCc------------H
Q 011589 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQ------------S 369 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~------------k 369 (482)
.+.|+||.||||+--.. ++. . ..--..+.||+.+-|..+.+ .|.+||+|.-. .
T Consensus 5 ~k~lflDRDGtin~d~~------~yv-----~---~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~ 70 (181)
T COG0241 5 QKALFLDRDGTINIDKG------DYV-----D---SLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFD 70 (181)
T ss_pred CcEEEEcCCCceecCCC------ccc-----C---cHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHH
Confidence 57999999999964321 010 0 00015578999999999975 59999999822 2
Q ss_pred HHHHHHHHHhCCCCCeeeeEEEccc-----ceeeC---CceeecccccCCCCCcEEEEECChhhhccCCCc---eeeecc
Q 011589 370 IYAAQLLDILDPDGKLISRRVYRES-----CIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNN---GIPIES 438 (482)
Q Consensus 370 ~YA~~ILd~LDP~~klfs~RLyRe~-----C~~~~---g~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~N---gIpI~~ 438 (482)
.+-+.++..|--.|.-|..+++..| |.+.+ |.+..-++..+.|+++.++|=|+..-....... ++.+..
T Consensus 71 ~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~ 150 (181)
T COG0241 71 KLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLT 150 (181)
T ss_pred HHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEc
Confidence 2444467777777777999999543 55554 355566667789999999999996544322112 555555
Q ss_pred ccCC
Q 011589 439 WFDD 442 (482)
Q Consensus 439 w~gd 442 (482)
|.+.
T Consensus 151 ~~~~ 154 (181)
T COG0241 151 GIGV 154 (181)
T ss_pred Cccc
Confidence 5543
No 96
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=94.09 E-value=0.1 Score=53.38 Aligned_cols=104 Identities=18% Similarity=0.291 Sum_probs=68.0
Q ss_pred EEeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCC---CCCeeeeEEEcccceeeCC-------ceeec----
Q 011589 341 YVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDP---DGKLISRRVYRESCIFSDG-------TYTKD---- 405 (482)
Q Consensus 341 yV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~LDP---~~klfs~RLyRe~C~~~~g-------~yiKD---- 405 (482)
.+.+|||+.+||++|.++ ..++|+|+|...+++.+++.+.- ....++.++--.......| .+-|.
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~ 198 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA 198 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence 378899999999999755 99999999999999999998553 3345666665321111111 11221
Q ss_pred ---ccccC--CCCCcEEEEECChhhhcc-----CCCceeeeccccCCCCc
Q 011589 406 ---LTVLG--VDLAKVAIIDNSPQVFRL-----QVNNGIPIESWFDDPSD 445 (482)
Q Consensus 406 ---Ls~LG--RdLs~VIIVDDsp~~~~~-----qp~NgIpI~~w~gd~~D 445 (482)
.+.++ .+.+++|+|-|+..-..+ +.+|.|.|. |..+.-+
T Consensus 199 ~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~ig-fln~~~e 247 (277)
T TIGR01544 199 LRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIG-YLNDRVD 247 (277)
T ss_pred HHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEE-ecccCHH
Confidence 12345 678899999999975433 334555553 4444333
No 97
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=94.01 E-value=0.11 Score=48.75 Aligned_cols=54 Identities=28% Similarity=0.284 Sum_probs=44.5
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 011589 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (482)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~ 382 (482)
|++||||||+++... +-|...+.|+++. +...++|.|.-....+..++..+.-.
T Consensus 1 i~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGK-----------------------ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp EEEECCTTTCSTTSS-----------------------SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred cEEEECCceecCCCe-----------------------eCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 689999999985311 3577888899888 77999999999999999999977644
No 98
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=93.93 E-value=0.1 Score=50.04 Aligned_cols=94 Identities=10% Similarity=0.090 Sum_probs=61.1
Q ss_pred EEeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEE--cccceeeCC---c----------eee
Q 011589 341 YVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVY--RESCIFSDG---T----------YTK 404 (482)
Q Consensus 341 yV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLy--Re~C~~~~g---~----------yiK 404 (482)
.+.+|||+.+||+++.+. +.++|.|++...|++++++.+.+...++..++. .+....... . ..+
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 368999999999999964 999999999999999999998654434443333 111111100 0 012
Q ss_pred cccccCCCCCcEEEEECChhhhccCCCcee
Q 011589 405 DLTVLGVDLAKVAIIDNSPQVFRLQVNNGI 434 (482)
Q Consensus 405 DLs~LGRdLs~VIIVDDsp~~~~~qp~NgI 434 (482)
-++.++....++|.|-|+..-+..-...++
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 233344566789999999876644333333
No 99
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=93.83 E-value=0.1 Score=48.62 Aligned_cols=106 Identities=21% Similarity=0.289 Sum_probs=54.9
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCc---H----------
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQ---S---------- 369 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~---k---------- 369 (482)
+.+.||||||||....... |. ....=+..+-|++-+-|+++.+ .|.|||+|.-. +
T Consensus 1 Kia~fD~DgTLi~~~s~~~----f~-------~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~ 69 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKK----FP-------KDPDDWKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENF 69 (159)
T ss_dssp SEEEE-SCTTTEE-STSTT----S--------SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHH
T ss_pred CEEEEeCCCCccCCCCCCc----Cc-------CCHHHhhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHH
Confidence 4789999999998753211 00 0011134567889999999985 69999999641 1
Q ss_pred -HHHHHHHHHhCCCCCeeeeEEE---cccceee-CCcee---ecccc-cCCCCCcEEEEECChh
Q 011589 370 -IYAAQLLDILDPDGKLISRRVY---RESCIFS-DGTYT---KDLTV-LGVDLAKVAIIDNSPQ 424 (482)
Q Consensus 370 -~YA~~ILd~LDP~~klfs~RLy---Re~C~~~-~g~yi---KDLs~-LGRdLs~VIIVDDsp~ 424 (482)
...+.+++.|+- .+ ..++ .+.|..- .|++. +++.. +..|+++.++|=|++.
T Consensus 70 ~~ki~~il~~l~i---p~-~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaag 129 (159)
T PF08645_consen 70 HEKIENILKELGI---PI-QVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAG 129 (159)
T ss_dssp HHHHHHHHHHCTS----E-EEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCH
T ss_pred HHHHHHHHHHcCC---ce-EEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCC
Confidence 233445555532 22 2222 2223211 23333 33332 2358899999998753
No 100
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=93.76 E-value=0.13 Score=44.45 Aligned_cols=50 Identities=24% Similarity=0.279 Sum_probs=36.5
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHh
Q 011589 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDIL 379 (482)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~L 379 (482)
+++|+||||.+.. ..=||+.+||++|.+. ..+++.|.+...-...+.+.|
T Consensus 1 ~l~D~dGvl~~g~------------------------~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L 51 (101)
T PF13344_consen 1 FLFDLDGVLYNGN------------------------EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL 51 (101)
T ss_dssp EEEESTTTSEETT------------------------EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH
T ss_pred CEEeCccEeEeCC------------------------CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH
Confidence 5899999998742 1249999999999965 999999999855545554444
No 101
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=93.58 E-value=0.11 Score=49.02 Aligned_cols=115 Identities=12% Similarity=0.141 Sum_probs=73.5
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceec-eEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCC
Q 011589 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEH-TVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDP 381 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~-~vyV~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~LDP 381 (482)
-+++|+|.||+|-.-+. .++..+. ...+..|-|.--.+-+ .+.+.+.|.|+....+++.+++.+.-
T Consensus 7 i~~~v~d~dGv~tdg~~------------~~~~~g~~~~~~~~~D~~~~~~L~-~~Gi~laIiT~k~~~~~~~~l~~lgi 73 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRI------------VINDEGIESRNFDIKDGMGVIVLQ-LCGIDVAIITSKKSGAVRHRAEELKI 73 (169)
T ss_pred CeEEEEeCceeeECCeE------------EEcCCCcEEEEEecchHHHHHHHH-HCCCEEEEEECCCcHHHHHHHHHCCC
Confidence 56899999999976531 1111111 2334556655432221 35699999999999999999999977
Q ss_pred CCCeeeeEEEcccceeeC-CceeecccccCCCCCcEEEEECChhhhccCCCceeeecc
Q 011589 382 DGKLISRRVYRESCIFSD-GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIES 438 (482)
Q Consensus 382 ~~klfs~RLyRe~C~~~~-g~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~NgIpI~~ 438 (482)
.. +|... ..+ ..+.+-+..+|-++++++.|-|++.-...-...|+.+-+
T Consensus 74 ~~-~f~~~-------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am 123 (169)
T TIGR02726 74 KR-FHEGI-------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAV 123 (169)
T ss_pred cE-EEecC-------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEEC
Confidence 63 55421 111 123344456788889999999998765444345555444
No 102
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=93.56 E-value=0.2 Score=49.67 Aligned_cols=59 Identities=19% Similarity=0.255 Sum_probs=45.6
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHh
Q 011589 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 379 (482)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~L 379 (482)
+.++.+++||||||++... ..-|-..+-|+++. +...++|.|.-....+.++++.|
T Consensus 5 ~~~~lI~~DlDGTLL~~~~-----------------------~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l 61 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHT-----------------------YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTL 61 (271)
T ss_pred CCCeEEEEeCccCCcCCCC-----------------------cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHh
Confidence 4467999999999997521 01244667788887 45999999999999999999998
Q ss_pred CCC
Q 011589 380 DPD 382 (482)
Q Consensus 380 DP~ 382 (482)
+..
T Consensus 62 ~~~ 64 (271)
T PRK03669 62 GLQ 64 (271)
T ss_pred CCC
Confidence 764
No 103
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=93.49 E-value=0.2 Score=47.64 Aligned_cols=57 Identities=16% Similarity=0.243 Sum_probs=46.4
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCCC
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPD 382 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~LDP~ 382 (482)
+.+++||||||+... -.+.|...+-|+++.+. +.++|.|.-....+.++++.|...
T Consensus 2 k~v~~DlDGTLl~~~-----------------------~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 2 KLVAIDIDGTLTEPN-----------------------RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS 58 (215)
T ss_pred cEEEEecCCCcCCCC-----------------------cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence 478999999998532 02467788889999854 899999999999999999999876
Q ss_pred C
Q 011589 383 G 383 (482)
Q Consensus 383 ~ 383 (482)
+
T Consensus 59 ~ 59 (215)
T TIGR01487 59 G 59 (215)
T ss_pred C
Confidence 4
No 104
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=93.15 E-value=0.22 Score=48.61 Aligned_cols=54 Identities=19% Similarity=0.252 Sum_probs=43.1
Q ss_pred EEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCC
Q 011589 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD 382 (482)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~ 382 (482)
.+++||||||++... .-|...++|+++.+ ...+++.|.-+...+..+++.+...
T Consensus 1 li~~DlDGTLl~~~~------------------------~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 1 VIFTDLDGTLLPPGY------------------------EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CEEEeCCCCCcCCCC------------------------CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 368999999998420 13568899999985 5999999999988888888888753
No 105
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=92.97 E-value=0.25 Score=48.40 Aligned_cols=57 Identities=19% Similarity=0.204 Sum_probs=45.3
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCC
Q 011589 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDP 381 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP 381 (482)
.+.+++||||||++... .+-|...+-|+++.+ .+.++|-|.-....+.++++.|..
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH-----------------------TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHM 59 (270)
T ss_pred eEEEEEecCCcCcCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCC
Confidence 46899999999997531 134566788888884 489999999999999999999876
Q ss_pred C
Q 011589 382 D 382 (482)
Q Consensus 382 ~ 382 (482)
.
T Consensus 60 ~ 60 (270)
T PRK10513 60 E 60 (270)
T ss_pred C
Confidence 4
No 106
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=92.77 E-value=0.38 Score=45.87 Aligned_cols=57 Identities=12% Similarity=0.245 Sum_probs=45.1
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCC
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD 382 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~ 382 (482)
+.+++||||||+.... .+.|...+-|+++.+ ...++|-|.-....+.++++.|...
T Consensus 4 kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (230)
T PRK01158 4 KAIAIDIDGTITDKDR-----------------------RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS 60 (230)
T ss_pred eEEEEecCCCcCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 5899999999996421 245677888888884 5899999999988899998888765
Q ss_pred C
Q 011589 383 G 383 (482)
Q Consensus 383 ~ 383 (482)
+
T Consensus 61 ~ 61 (230)
T PRK01158 61 G 61 (230)
T ss_pred C
Confidence 4
No 107
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=92.72 E-value=0.27 Score=48.02 Aligned_cols=56 Identities=27% Similarity=0.322 Sum_probs=43.7
Q ss_pred EEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCC
Q 011589 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDG 383 (482)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~ 383 (482)
.+++||||||+.... .+.|...+.|+++.+ .+.++|-|......+..+++.+....
T Consensus 1 li~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~ 57 (256)
T TIGR00099 1 LIFIDLDGTLLNDDH-----------------------TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDT 57 (256)
T ss_pred CEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 378999999997521 135667788888884 59999999999998888888887653
No 108
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=92.68 E-value=0.34 Score=47.33 Aligned_cols=58 Identities=24% Similarity=0.295 Sum_probs=42.2
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCC
Q 011589 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP 381 (482)
.+++++||||||+.... .+.|...+-|+++. +...++|-|.-....+..+++.|..
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (272)
T PRK10530 3 YRVIALDLDGTLLTPKK-----------------------TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALAL 59 (272)
T ss_pred ccEEEEeCCCceECCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCC
Confidence 35899999999996531 12455567777777 4588888888888888888888766
Q ss_pred CC
Q 011589 382 DG 383 (482)
Q Consensus 382 ~~ 383 (482)
..
T Consensus 60 ~~ 61 (272)
T PRK10530 60 DT 61 (272)
T ss_pred CC
Confidence 53
No 109
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=92.19 E-value=0.47 Score=45.20 Aligned_cols=54 Identities=24% Similarity=0.256 Sum_probs=42.9
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCC
Q 011589 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD 382 (482)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~ 382 (482)
+++||||||+..... ..|-..+.|+++.+ ...++|.|......+..+++.+...
T Consensus 2 i~~DlDGTLL~~~~~-----------------------~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 2 VFSDLDGTLLDSHSY-----------------------DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred EEEeCCCCCcCCCCC-----------------------CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 789999999975310 12236788999885 4899999999999999999998754
No 110
>PRK10976 putative hydrolase; Provisional
Probab=91.80 E-value=0.45 Score=46.66 Aligned_cols=57 Identities=23% Similarity=0.246 Sum_probs=40.3
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~ 382 (482)
+.+++||||||+.... .+.|...+-|+++. +...++|-|.-....+.++++.|+..
T Consensus 3 kli~~DlDGTLl~~~~-----------------------~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 3 QVVASDLDGTLLSPDH-----------------------TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIK 59 (266)
T ss_pred eEEEEeCCCCCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 5899999999997631 12445566677766 45788888887777777777777654
Q ss_pred C
Q 011589 383 G 383 (482)
Q Consensus 383 ~ 383 (482)
.
T Consensus 60 ~ 60 (266)
T PRK10976 60 S 60 (266)
T ss_pred C
Confidence 3
No 111
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=91.74 E-value=0.46 Score=46.86 Aligned_cols=57 Identities=19% Similarity=0.220 Sum_probs=41.4
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCC
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD 382 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~ 382 (482)
+.+++||||||+.... .+-|...+-|+++.+ ...++|-|.-....+.++++.++..
T Consensus 3 kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (272)
T PRK15126 3 RLAAFDMDGTLLMPDH-----------------------HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLD 59 (272)
T ss_pred cEEEEeCCCcCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Confidence 5899999999997521 134556677777774 4788888888888888888887665
Q ss_pred C
Q 011589 383 G 383 (482)
Q Consensus 383 ~ 383 (482)
.
T Consensus 60 ~ 60 (272)
T PRK15126 60 A 60 (272)
T ss_pred C
Confidence 3
No 112
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=91.65 E-value=0.42 Score=46.93 Aligned_cols=55 Identities=25% Similarity=0.240 Sum_probs=43.5
Q ss_pred EEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCCC
Q 011589 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPD 382 (482)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~LDP~ 382 (482)
.+++||||||++... ...+...++++++.+. ..+++.|.-....+..+++.+...
T Consensus 1 li~~DlDGTll~~~~-----------------------~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 1 WIFTDLDGTLLDPHG-----------------------YDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CEEEcCCCCCcCCCC-----------------------cCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 378999999997631 0123578999999865 899999999999999999998753
No 113
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=91.51 E-value=0.37 Score=45.21 Aligned_cols=54 Identities=31% Similarity=0.375 Sum_probs=43.4
Q ss_pred EEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhC
Q 011589 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILD 380 (482)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~LD 380 (482)
+|++|+||||+.... ....|.+.+.|+++.+. ..++|.|......+..+++.++
T Consensus 1 li~~D~DgTL~~~~~----------------------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 1 LLFFDLDGTLLDPNA----------------------HELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred CEEEeCcCCCcCCCC----------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 378999999996420 12358889999999865 8999999999999999998753
No 114
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=91.20 E-value=0.5 Score=43.88 Aligned_cols=62 Identities=15% Similarity=0.230 Sum_probs=41.9
Q ss_pred EEEEecCcccccccc-cccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHH---HHHHHh
Q 011589 305 TLVLDLDETLVHSTL-EYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAA---QLLDIL 379 (482)
Q Consensus 305 tLVLDLDeTLVhSs~-~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~---~ILd~L 379 (482)
.+++|+||||+.+.. .+.. +. .... +..|++.++++++.+ .|.+++.|+.....+. +.++.+
T Consensus 1 iVisDIDGTL~~sd~~~~~~------~~----~~~~---~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~ 67 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVV------PI----IGKD---WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQI 67 (157)
T ss_pred CEEEecCCCCcccccccccc------cc----cccC---cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHh
Confidence 378999999997741 1100 00 0001 347999999999995 5888888988877765 556553
No 115
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=91.14 E-value=0.046 Score=54.15 Aligned_cols=95 Identities=18% Similarity=0.178 Sum_probs=71.0
Q ss_pred EEeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhC-CCCCeeeeEEEcccceeeC-----CceeecccccCCCC
Q 011589 341 YVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILD-PDGKLISRRVYRESCIFSD-----GTYTKDLTVLGVDL 413 (482)
Q Consensus 341 yV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~LD-P~~klfs~RLyRe~C~~~~-----g~yiKDLs~LGRdL 413 (482)
.++.-||+..++..|..+ -.+.++|++.+..++..++.+. +. ..|++...-+.-.... ..|.+-++++|..+
T Consensus 90 ~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~-~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~ 168 (222)
T KOG2914|consen 90 NSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIF-KNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPP 168 (222)
T ss_pred ccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHH-HhcCCCeecCCccccCCCCCchHHHHHHHhcCCCC
Confidence 478889999999999954 8999999999999998888876 43 3566666622222222 25788889999988
Q ss_pred -CcEEEEECChhhhccCCCceeee
Q 011589 414 -AKVAIIDNSPQVFRLQVNNGIPI 436 (482)
Q Consensus 414 -s~VIIVDDsp~~~~~qp~NgIpI 436 (482)
+++++++|++........-|.++
T Consensus 169 ~~k~lVfeds~~Gv~aa~aagm~v 192 (222)
T KOG2914|consen 169 PSKCLVFEDSPVGVQAAKAAGMQV 192 (222)
T ss_pred ccceEEECCCHHHHHHHHhcCCeE
Confidence 99999999998775543334333
No 116
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=91.14 E-value=0.61 Score=42.32 Aligned_cols=49 Identities=18% Similarity=0.352 Sum_probs=41.5
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEE
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY 391 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLy 391 (482)
+.+|||+.++|+++.+ .+.++|.|++.+.|++.+++.+.... +|..++.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~~~ 121 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANRLE 121 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeeeEE
Confidence 5689999999999974 59999999999999999999987653 5665554
No 117
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=91.03 E-value=0.13 Score=50.23 Aligned_cols=89 Identities=10% Similarity=0.106 Sum_probs=61.6
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEEE
Q 011589 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAI 418 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g---~yiKDLs~LGRdLs~VII 418 (482)
+..-||+.++|++|++.|.++|.|++... ++.+.-. .+|...+..+.....+. .|.+-++.+|.+++++|+
T Consensus 112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~-~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~ 185 (238)
T PRK10748 112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLG-DYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILH 185 (238)
T ss_pred CCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcH-HhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEE
Confidence 44559999999999988999999998875 2444333 47877776554333332 456667788999999999
Q ss_pred EECCh-hhhccCCCceeee
Q 011589 419 IDNSP-QVFRLQVNNGIPI 436 (482)
Q Consensus 419 VDDsp-~~~~~qp~NgIpI 436 (482)
|-|++ .-......+|+..
T Consensus 186 VGD~~~~Di~~A~~aG~~~ 204 (238)
T PRK10748 186 VGDDLTTDVAGAIRCGMQA 204 (238)
T ss_pred EcCCcHHHHHHHHHCCCeE
Confidence 98884 4443333455543
No 118
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=90.87 E-value=0.58 Score=44.59 Aligned_cols=96 Identities=20% Similarity=0.290 Sum_probs=63.3
Q ss_pred CCCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcce---EEEEEcCCc-------
Q 011589 299 QGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMF---EVVIFTASQ------- 368 (482)
Q Consensus 299 ~~~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~Y---EIvIfTAs~------- 368 (482)
...+-+.||||+|+||+.-.. -..-|.+.+.++++.+.| .|+|+|.+.
T Consensus 37 k~~Gik~li~DkDNTL~~~~~----------------------~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~ 94 (168)
T PF09419_consen 37 KKKGIKALIFDKDNTLTPPYE----------------------DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPD 94 (168)
T ss_pred hhcCceEEEEcCCCCCCCCCc----------------------CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCcc
Confidence 456778999999999975321 124688889999999776 399999983
Q ss_pred HHHHHHHHHHhCCCCCeeeeEEEcccceeeCCceeecccccC-----CCCCcEEEEECChh
Q 011589 369 SIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLG-----VDLAKVAIIDNSPQ 424 (482)
Q Consensus 369 k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g~yiKDLs~LG-----RdLs~VIIVDDsp~ 424 (482)
..-|+.+-+.|.-. .+.|+--.. +.+-+-++.++ ..++++++|-|+-.
T Consensus 95 ~~~a~~~~~~lgIp--vl~h~~kKP------~~~~~i~~~~~~~~~~~~p~eiavIGDrl~ 147 (168)
T PF09419_consen 95 GERAEALEKALGIP--VLRHRAKKP------GCFREILKYFKCQKVVTSPSEIAVIGDRLF 147 (168)
T ss_pred HHHHHHHHHhhCCc--EEEeCCCCC------ccHHHHHHHHhhccCCCCchhEEEEcchHH
Confidence 67787887888743 233332122 22222222222 35889999999874
No 119
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=90.31 E-value=0.73 Score=43.66 Aligned_cols=53 Identities=17% Similarity=0.249 Sum_probs=40.0
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCC
Q 011589 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDP 381 (482)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP 381 (482)
+++||||||+.+.. .+.|-..+-|+++.+ ...+++-|.-....+.++++.|..
T Consensus 1 i~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~ 54 (225)
T TIGR01482 1 IASDIDGTLTDPNR-----------------------AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGT 54 (225)
T ss_pred CeEeccCccCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence 58999999997531 134556677777774 488999999888888888888874
No 120
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=90.28 E-value=0.29 Score=46.79 Aligned_cols=118 Identities=19% Similarity=0.272 Sum_probs=82.7
Q ss_pred CCccCCCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHH
Q 011589 295 PKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAA 373 (482)
Q Consensus 295 P~~~~~~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~ 373 (482)
|.....++-+.+|+|||+|||-= ... ..-|-+.+.+..+... -.++|.+...+.-+.
T Consensus 20 ~~~L~~~Gikgvi~DlDNTLv~w--d~~--------------------~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~ 77 (175)
T COG2179 20 PDILKAHGIKGVILDLDNTLVPW--DNP--------------------DATPELRAWLAELKEAGIKVVVVSNNKESRVA 77 (175)
T ss_pred HHHHHHcCCcEEEEeccCceecc--cCC--------------------CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHH
Confidence 44445678889999999999853 211 1358899999999955 999999999999999
Q ss_pred HHHHHhCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECChh--hhccCCCc--eeeeccccC
Q 011589 374 QLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ--VFRLQVNN--GIPIESWFD 441 (482)
Q Consensus 374 ~ILd~LDP~~klfs~RLyRe~C~~~~g~yiKDLs~LGRdLs~VIIVDDsp~--~~~~qp~N--gIpI~~w~g 441 (482)
.++..||-.. + ++--.. ....+.|-|..++-+.++|+.|-|.-. +...+... .|.|+|-..
T Consensus 78 ~~~~~l~v~f--i-~~A~KP----~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~Pl~~ 142 (175)
T COG2179 78 RAAEKLGVPF--I-YRAKKP----FGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEPLVA 142 (175)
T ss_pred hhhhhcCCce--e-ecccCc----cHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEEecc
Confidence 9999998752 1 000000 011345777888999999999999874 44444322 467777543
No 121
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=90.12 E-value=0.51 Score=48.51 Aligned_cols=53 Identities=17% Similarity=0.265 Sum_probs=40.6
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-----ceEEEEEcCCc----HHHHHH
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-----MFEVVIFTASQ----SIYAAQ 374 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-----~YEIvIfTAs~----k~YA~~ 374 (482)
+.++||+||||+++. ..-||+.+||+.+.. ...++++|... +.+++.
T Consensus 1 ~~~ifD~DGvL~~g~------------------------~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~ 56 (321)
T TIGR01456 1 FGFAFDIDGVLFRGK------------------------KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEE 56 (321)
T ss_pred CEEEEeCcCceECCc------------------------cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHH
Confidence 368999999998874 126899999999996 78888988764 566777
Q ss_pred HHHHhC
Q 011589 375 LLDILD 380 (482)
Q Consensus 375 ILd~LD 380 (482)
+.+.+.
T Consensus 57 l~~~lG 62 (321)
T TIGR01456 57 ISSLLG 62 (321)
T ss_pred HHHHcC
Confidence 655543
No 122
>PRK10444 UMP phosphatase; Provisional
Probab=90.11 E-value=0.47 Score=47.27 Aligned_cols=54 Identities=22% Similarity=0.369 Sum_probs=42.2
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCC
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDP 381 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP 381 (482)
+.+++||||||++.. ..=||+.+||+++.+ ...+++.|.....-+..+++.|.-
T Consensus 2 ~~v~~DlDGtL~~~~------------------------~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~ 56 (248)
T PRK10444 2 KNVICDIDGVLMHDN------------------------VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFAT 56 (248)
T ss_pred cEEEEeCCCceEeCC------------------------eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 378999999998763 125899999999985 588999998888767777766643
No 123
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=89.98 E-value=0.67 Score=46.45 Aligned_cols=59 Identities=15% Similarity=0.075 Sum_probs=41.3
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc--ceEEEEEcCCcHHHHHHHHHHh
Q 011589 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLDIL 379 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk--~YEIvIfTAs~k~YA~~ILd~L 379 (482)
+..|++|+||||+.....+.. ...-|.+.+-|+.|++ ...++|.|.-...-+..++..+
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~------------------~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~ 74 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQ------------------VVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY 74 (266)
T ss_pred CEEEEEecCCCCCCCCCCccc------------------ccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc
Confidence 679999999999975422211 1234778888888875 4678888888877777766544
No 124
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=89.76 E-value=0.45 Score=52.19 Aligned_cols=129 Identities=19% Similarity=0.246 Sum_probs=70.6
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecce-eceEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHH
Q 011589 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMK-EHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD 377 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~-~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd 377 (482)
.+.+++||||||+||.--. -..+-.-.+..... ....| --+++|...+. +.+=+.|.|-....-|..+..
T Consensus 219 g~~kK~LVLDLDNTLWGGV----IGedGv~GI~Ls~~~~G~~f----k~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~ 290 (574)
T COG3882 219 GKSKKALVLDLDNTLWGGV----IGEDGVDGIRLSNSAEGEAF----KTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFR 290 (574)
T ss_pred CcccceEEEecCCcccccc----cccccccceeecCCCCchhH----HHHHHHHHHHHhccEEEEEecCCchhhHHHHHh
Confidence 4567899999999995443 22221111111100 00000 01345555555 457788888888888887765
Q ss_pred HhCCCCCeeeeEEEccc-----ceeeC-C-ceeecccccCCCCCcEEEEECChhhhccCCCce-eeeccccCC
Q 011589 378 ILDPDGKLISRRVYRES-----CIFSD-G-TYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNG-IPIESWFDD 442 (482)
Q Consensus 378 ~LDP~~klfs~RLyRe~-----C~~~~-g-~yiKDLs~LGRdLs~VIIVDDsp~~~~~qp~Ng-IpI~~w~gd 442 (482)
+- |+ ..|--++ |.+.+ + +..|-.++|+-.+.-.|+|||.|.....-..++ +.+.+|-.|
T Consensus 291 kh-p~-----MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~v~Vi~~~~D 357 (574)
T COG3882 291 KH-PD-----MILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELPVSVIEFPED 357 (574)
T ss_pred hC-CC-----eEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCceeeccCCCC
Confidence 42 11 1222222 22221 1 344666788999999999999997664432232 555555433
No 125
>PLN02645 phosphoglycolate phosphatase
Probab=89.52 E-value=0.46 Score=48.56 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=39.5
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHh
Q 011589 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 379 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~L 379 (482)
-.+++||+||||++.. .+ =||+.++|+++. +...+++.|.....-...+++.|
T Consensus 28 ~~~~~~D~DGtl~~~~----------------------~~--~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l 81 (311)
T PLN02645 28 VETFIFDCDGVIWKGD----------------------KL--IEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKF 81 (311)
T ss_pred CCEEEEeCcCCeEeCC----------------------cc--CcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHH
Confidence 4589999999997642 01 289999999998 56999999998855555555444
No 126
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=89.36 E-value=0.96 Score=46.90 Aligned_cols=57 Identities=12% Similarity=0.155 Sum_probs=43.8
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCC
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD 382 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~ 382 (482)
+.+++||||||+.... | .-+-+.+-|+++.+ ...|++.|+-+..-+..+.+.|...
T Consensus 2 KLIftDLDGTLLd~~~---------------------~--~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 2 RLVLSSLDGSLLDLEF---------------------N--SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cEEEEeCCCCCcCCCC---------------------c--CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 5889999999997531 1 12346777888885 4899999999888888888888765
Q ss_pred C
Q 011589 383 G 383 (482)
Q Consensus 383 ~ 383 (482)
.
T Consensus 59 ~ 59 (302)
T PRK12702 59 H 59 (302)
T ss_pred C
Confidence 4
No 127
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=89.05 E-value=0.57 Score=46.79 Aligned_cols=49 Identities=18% Similarity=0.326 Sum_probs=41.1
Q ss_pred EeeCchHHHHHHHhh---cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEE
Q 011589 342 VKQRPHLKTFLERVA---EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY 391 (482)
Q Consensus 342 V~lRPgL~eFLe~Ls---k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLy 391 (482)
+...||..+|+++++ ..++++|-|-|..-|.+.+|+.-+-.+ .|+.++.
T Consensus 70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~-~f~~I~T 121 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD-CFSEIFT 121 (234)
T ss_pred CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc-ccceEEe
Confidence 788999999999995 379999999999999999999977654 4544443
No 128
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=88.56 E-value=0.36 Score=48.47 Aligned_cols=100 Identities=17% Similarity=0.203 Sum_probs=66.8
Q ss_pred EEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcc---------------cceeeCCc-e-
Q 011589 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRE---------------SCIFSDGT-Y- 402 (482)
Q Consensus 341 yV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe---------------~C~~~~g~-y- 402 (482)
+...-|.+-++++.+. +..-++..|+....+...-++.|--.|--|+...+++ .-.+.+|. +
T Consensus 79 ~~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft 158 (252)
T PF11019_consen 79 MELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFT 158 (252)
T ss_pred eEEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEe
Confidence 3566789999999999 5699999999999999988888754443333332111 11223331 1
Q ss_pred ---------eecccccCCCCCcEEEEECChhhh----ccCCCceeeecccc
Q 011589 403 ---------TKDLTVLGVDLAKVAIIDNSPQVF----RLQVNNGIPIESWF 440 (482)
Q Consensus 403 ---------iKDLs~LGRdLs~VIIVDDsp~~~----~~qp~NgIpI~~w~ 440 (482)
..=|..+|+.++++|+|||+.... ..-...+|..-.++
T Consensus 159 ~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~ 209 (252)
T PF11019_consen 159 GGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFH 209 (252)
T ss_pred CCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEE
Confidence 122456799999999999999755 12233677776664
No 129
>PTZ00174 phosphomannomutase; Provisional
Probab=88.37 E-value=1 Score=44.36 Aligned_cols=52 Identities=19% Similarity=0.260 Sum_probs=37.0
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHH
Q 011589 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLD 377 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd 377 (482)
.+.+++||||||+++.. .+.|...+-|+++.+. ..++|-|.-...-+.+.+.
T Consensus 5 ~klia~DlDGTLL~~~~-----------------------~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 5 KTILLFDVDGTLTKPRN-----------------------PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CeEEEEECcCCCcCCCC-----------------------CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 46899999999998741 1346677788888754 8888888866654544443
No 130
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=88.28 E-value=0.61 Score=46.41 Aligned_cols=47 Identities=17% Similarity=0.148 Sum_probs=34.3
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHH
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSI 370 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~ 370 (482)
+++++||||||++..... =..=|+..++|+++.+ ...+++.|.....
T Consensus 2 k~i~~D~DGtl~~~~~~~--------------------~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~ 49 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKS--------------------GVAVPGSQEAVKRLRGASVKVRFVTNTTKE 49 (257)
T ss_pred CEEEEeCCCeEEeCCCcc--------------------cCcCCCHHHHHHHHHHCCCeEEEEECCCCC
Confidence 378999999998763100 0025899999999995 5899999965544
No 131
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=88.08 E-value=0.76 Score=46.05 Aligned_cols=41 Identities=20% Similarity=0.265 Sum_probs=32.3
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCc
Q 011589 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQ 368 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~ 368 (482)
..+++|+||||++.. ..-||+.++|+++.+ ...+++.|.+.
T Consensus 3 ~~~~~D~DGtl~~~~------------------------~~~~ga~e~l~~L~~~g~~~~~~Tnns 44 (279)
T TIGR01452 3 QGFIFDCDGVLWLGE------------------------RVVPGAPELLDRLARAGKAALFVTNNS 44 (279)
T ss_pred cEEEEeCCCceEcCC------------------------eeCcCHHHHHHHHHHCCCeEEEEeCCC
Confidence 478999999997642 124889999999985 58899999854
No 132
>PLN02423 phosphomannomutase
Probab=87.90 E-value=1.2 Score=44.07 Aligned_cols=55 Identities=18% Similarity=0.354 Sum_probs=36.7
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhC
Q 011589 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILD 380 (482)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~LD 380 (482)
+.+..+++||||||+.... .+-|...+-|+++.+...+++.|...- ..+.+.+.
T Consensus 5 ~~~~i~~~D~DGTLl~~~~-----------------------~i~~~~~~ai~~l~~~i~fviaTGR~~---~~~~~~~~ 58 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPRK-----------------------EATPEMLEFMKELRKVVTVGVVGGSDL---SKISEQLG 58 (245)
T ss_pred ccceEEEEeccCCCcCCCC-----------------------cCCHHHHHHHHHHHhCCEEEEECCcCH---HHHHHHhc
Confidence 3455667999999997631 124677788999988777777776532 24555554
Q ss_pred C
Q 011589 381 P 381 (482)
Q Consensus 381 P 381 (482)
+
T Consensus 59 ~ 59 (245)
T PLN02423 59 K 59 (245)
T ss_pred c
Confidence 4
No 133
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=87.76 E-value=1 Score=44.07 Aligned_cols=60 Identities=25% Similarity=0.081 Sum_probs=40.4
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcce-EEEEEcCCcHHHHHHHHHHhCC
Q 011589 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMF-EVVIFTASQSIYAAQLLDILDP 381 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~Y-EIvIfTAs~k~YA~~ILd~LDP 381 (482)
++.++.||||||+.+.... -...|.+.+-++++.+.- .+++-|.-+..-+.++++.+.+
T Consensus 1 ~~li~tDlDGTLl~~~~~~--------------------~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~ 60 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGD--------------------NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPL 60 (249)
T ss_pred CeEEEEcCCCcCcCCCCCC--------------------hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCC
Confidence 4688999999999642000 124588888888887665 6666666666667777666654
Q ss_pred C
Q 011589 382 D 382 (482)
Q Consensus 382 ~ 382 (482)
.
T Consensus 61 ~ 61 (249)
T TIGR01485 61 L 61 (249)
T ss_pred C
Confidence 4
No 134
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=87.72 E-value=0.69 Score=43.17 Aligned_cols=84 Identities=24% Similarity=0.270 Sum_probs=56.4
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEc-ccceee---CC--ce--eec--c----
Q 011589 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYR-ESCIFS---DG--TY--TKD--L---- 406 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyR-e~C~~~---~g--~y--iKD--L---- 406 (482)
..++|++.++|+++.+ .+.++|-|++...+++.+++.+.-.+ +|..++.. +.-.+. .+ .+ .|- +
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~ 164 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELL 164 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHH
Confidence 3579999999999985 59999999999999999999988765 66665442 110010 00 00 011 1
Q ss_pred cccCCCCCcEEEEECChhhh
Q 011589 407 TVLGVDLAKVAIIDNSPQVF 426 (482)
Q Consensus 407 s~LGRdLs~VIIVDDsp~~~ 426 (482)
...+.++++++.+-|++.-.
T Consensus 165 ~~~~~~~~~~~~~gDs~~D~ 184 (202)
T TIGR01490 165 AEEQIDLKDSYAYGDSISDL 184 (202)
T ss_pred HHcCCCHHHcEeeeCCcccH
Confidence 23355677788888877544
No 135
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=85.92 E-value=0.64 Score=47.04 Aligned_cols=79 Identities=20% Similarity=0.213 Sum_probs=42.3
Q ss_pred CCCceEEEEecCccccccccc----ccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcceEEEEEcC-CcHHH-HH
Q 011589 300 GRKSVTLVLDLDETLVHSTLE----YCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTA-SQSIY-AA 373 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~----~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YEIvIfTA-s~k~Y-A~ 373 (482)
+.|++.+|||||||.+.-+.. -.....|+-. ..+.-...---+.=||+.|||+++-++-=.|.|-+ -.++- ..
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe-~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~ 154 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPE-TWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKD 154 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCcc-chHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccc
Confidence 456679999999999987621 1112222100 00000000013456999999999998755555543 33333 33
Q ss_pred HHHHHh
Q 011589 374 QLLDIL 379 (482)
Q Consensus 374 ~ILd~L 379 (482)
.-++-|
T Consensus 155 ~T~~nL 160 (274)
T COG2503 155 GTIENL 160 (274)
T ss_pred hhHHHH
Confidence 334443
No 136
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=85.02 E-value=3.1 Score=47.66 Aligned_cols=60 Identities=18% Similarity=0.140 Sum_probs=45.6
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHH
Q 011589 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDI 378 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~ 378 (482)
..+++.+++||||||++... ++. +...+-|+++.+ ...++|.|.-....+..+++.
T Consensus 413 ~~~~KLIfsDLDGTLLd~d~---------------------~i~--~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~ 469 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLNPLT---------------------YSY--STALDALRLLKDKELPLVFCSAKTMGEQDLYRNE 469 (694)
T ss_pred CceeeEEEEECcCCCcCCCC---------------------ccC--HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH
Confidence 46778999999999998631 111 234566777774 589999999999999999998
Q ss_pred hCCC
Q 011589 379 LDPD 382 (482)
Q Consensus 379 LDP~ 382 (482)
|+..
T Consensus 470 Lgl~ 473 (694)
T PRK14502 470 LGIK 473 (694)
T ss_pred cCCC
Confidence 8754
No 137
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=84.32 E-value=2.3 Score=41.64 Aligned_cols=42 Identities=17% Similarity=0.335 Sum_probs=38.1
Q ss_pred EeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCCCC
Q 011589 342 VKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDG 383 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~LDP~~ 383 (482)
+++|||.++|.+++.++ -.++|-++|+..|..++++.|--+.
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke 114 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKE 114 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhcccc
Confidence 89999999999999966 8999999999999999999886543
No 138
>PLN03017 trehalose-phosphatase
Probab=84.15 E-value=1.7 Score=46.24 Aligned_cols=60 Identities=17% Similarity=0.165 Sum_probs=44.8
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHH
Q 011589 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 377 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd 377 (482)
..++..|+||+||||+--...+ -....-|.+.+-|++|++.+.++|-|--...-+.++++
T Consensus 108 ~~k~~llflD~DGTL~Piv~~p------------------~~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 167 (366)
T PLN03017 108 RGKQIVMFLDYDGTLSPIVDDP------------------DKAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVK 167 (366)
T ss_pred cCCCeEEEEecCCcCcCCcCCc------------------ccccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhc
Confidence 4567899999999998322111 01234588899999999999999999988888887743
No 139
>PLN02887 hydrolase family protein
Probab=83.81 E-value=2.6 Score=47.44 Aligned_cols=58 Identities=22% Similarity=0.209 Sum_probs=45.4
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhC
Q 011589 302 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD 380 (482)
Q Consensus 302 kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LD 380 (482)
+.+.+++||||||+.... .+-|...+-|+++. +...++|-|.-...-+..+++.|+
T Consensus 307 ~iKLIa~DLDGTLLn~d~-----------------------~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~ 363 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKS-----------------------QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVD 363 (580)
T ss_pred CccEEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Confidence 457899999999997631 13455667788887 559999999999888889999887
Q ss_pred CC
Q 011589 381 PD 382 (482)
Q Consensus 381 P~ 382 (482)
..
T Consensus 364 l~ 365 (580)
T PLN02887 364 LA 365 (580)
T ss_pred cc
Confidence 54
No 140
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=83.69 E-value=1.8 Score=42.83 Aligned_cols=52 Identities=21% Similarity=0.351 Sum_probs=35.0
Q ss_pred EEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc-ceEEEEEcCCc---HHHHHHHHHHhC
Q 011589 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQ---SIYAAQLLDILD 380 (482)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~---k~YA~~ILd~LD 380 (482)
.+++|+||||++... .=|+..++|+++.+ ...+++.|.+. ..-..+.++.+.
T Consensus 3 ~~~~D~DGtl~~~~~------------------------~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g 58 (249)
T TIGR01457 3 GYLIDLDGTMYKGKE------------------------RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFD 58 (249)
T ss_pred EEEEeCCCceEcCCe------------------------eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcC
Confidence 789999999986520 13688999999984 58888888533 333333444444
No 141
>PLN02151 trehalose-phosphatase
Probab=82.31 E-value=2.5 Score=44.79 Aligned_cols=60 Identities=15% Similarity=0.187 Sum_probs=45.7
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHH
Q 011589 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 377 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd 377 (482)
..++..|+||+||||+--...+ -.+..-|.+.+-|+.|++.+.++|-|.-...-.+.++.
T Consensus 95 ~~~~~ll~lDyDGTL~PIv~~P------------------~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 95 EGKQIVMFLDYDGTLSPIVDDP------------------DRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred cCCceEEEEecCccCCCCCCCc------------------ccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 4567899999999998432111 12446789999999999989999999888877777664
No 142
>PLN02580 trehalose-phosphatase
Probab=81.23 E-value=2.8 Score=44.84 Aligned_cols=61 Identities=20% Similarity=0.226 Sum_probs=48.0
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHH
Q 011589 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDI 378 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~ 378 (482)
..++..|+||.||||+--...| --+..-|++.+-|+.|++.+.++|-|.-...-.+.++..
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~~P------------------d~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVDDP------------------DRALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred hcCCeEEEEecCCccCCCCCCc------------------ccccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 4567899999999997543211 124567899999999999999999999998888877753
No 143
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=81.20 E-value=4.3 Score=40.58 Aligned_cols=93 Identities=15% Similarity=0.118 Sum_probs=54.0
Q ss_pred CCCceEEEEecCccccccccccc----CCCCceEEEEecceeceEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHH
Q 011589 300 GRKSVTLVLDLDETLVHSTLEYC----DDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQ 374 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~----~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ 374 (482)
..++..+|||+|||++....-.. ....|.-. .++.--..---..-|++.+|++++. +.++|++.|.-.......
T Consensus 74 ~dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~-~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~ 152 (229)
T TIGR01675 74 GDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPT-AFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNA 152 (229)
T ss_pred CCCCcEEEEccccccccCHHHHHHhccCCCcCCHH-HHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHH
Confidence 35788999999999998752110 01111000 0000000001346799999999997 569999999998877555
Q ss_pred HHHHhCCCCCe-eeeEEEcc
Q 011589 375 LLDILDPDGKL-ISRRVYRE 393 (482)
Q Consensus 375 ILd~LDP~~kl-fs~RLyRe 393 (482)
.++.|.-.|-. +.+.+.|.
T Consensus 153 T~~nL~~~G~~~~~~LiLR~ 172 (229)
T TIGR01675 153 TLDNLINAGFTGWKHLILRG 172 (229)
T ss_pred HHHHHHHcCCCCcCeeeecC
Confidence 55555444411 24445564
No 144
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=80.96 E-value=1.9 Score=42.21 Aligned_cols=50 Identities=26% Similarity=0.347 Sum_probs=36.7
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcc-eEEEEEcCC----cHHHHHHHHHHh
Q 011589 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTAS----QSIYAAQLLDIL 379 (482)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~-YEIvIfTAs----~k~YA~~ILd~L 379 (482)
++||+||||+.... .=|++.++|+.+.+. +.+++-|.+ ...+++.+.+.+
T Consensus 1 ~lfD~DGvL~~~~~------------------------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~ 55 (236)
T TIGR01460 1 FLFDIDGVLWLGHK------------------------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLL 55 (236)
T ss_pred CEEeCcCccCcCCc------------------------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhc
Confidence 47999999987631 136899999999854 888888744 456777776643
No 145
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=79.32 E-value=2.5 Score=43.14 Aligned_cols=53 Identities=19% Similarity=0.217 Sum_probs=39.1
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHh
Q 011589 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDIL 379 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~L 379 (482)
..++.+||||||++-. ..=||+.+||+++.+. -.+++-|.+..+-.+.+...|
T Consensus 8 y~~~l~DlDGvl~~G~------------------------~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 8 YDGFLFDLDGVLYRGN------------------------EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCEEEEcCcCceEeCC------------------------ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 4478999999998753 2249999999999966 788888887765444444333
No 146
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=78.97 E-value=1.9 Score=42.37 Aligned_cols=48 Identities=19% Similarity=0.173 Sum_probs=32.9
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcceEEE--EEcCC
Q 011589 302 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVV--IFTAS 367 (482)
Q Consensus 302 kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YEIv--IfTAs 367 (482)
|+..|+||+||||+-....+ -....-|++.+.|+.|++....+ |-|.-
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p------------------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR 51 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDP------------------DAAVVSDRLLTILQKLAARPHNAIWIISGR 51 (244)
T ss_pred CcEEEEEecCccccCCcCCC------------------cccCCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 56789999999998542111 01234689999999999876544 44544
No 147
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=78.75 E-value=4.1 Score=41.61 Aligned_cols=61 Identities=20% Similarity=0.151 Sum_probs=46.2
Q ss_pred CCCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcceE--EEEEcCCcHHHHHHHH
Q 011589 299 QGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE--VVIFTASQSIYAAQLL 376 (482)
Q Consensus 299 ~~~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YE--IvIfTAs~k~YA~~IL 376 (482)
...++.+++||.||||++....+. -+..=+++.+-|..|+..+. ++|.|.-+..-.+..+
T Consensus 14 ~~a~~~~~~lDyDGTl~~i~~~p~------------------~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~ 75 (266)
T COG1877 14 LNARKRLLFLDYDGTLTEIVPHPE------------------AAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLF 75 (266)
T ss_pred ccccceEEEEeccccccccccCcc------------------ccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhc
Confidence 345678999999999998764331 23445788999999998888 7777877777777766
Q ss_pred H
Q 011589 377 D 377 (482)
Q Consensus 377 d 377 (482)
.
T Consensus 76 ~ 76 (266)
T COG1877 76 G 76 (266)
T ss_pred C
Confidence 6
No 148
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=78.44 E-value=1.1 Score=44.90 Aligned_cols=40 Identities=18% Similarity=0.458 Sum_probs=35.4
Q ss_pred EeeCchHHHHHHHhhcc--eEEEEEcCCcHHHHHHHHHHhCC
Q 011589 342 VKQRPHLKTFLERVAEM--FEVVIFTASQSIYAAQLLDILDP 381 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~--YEIvIfTAs~k~YA~~ILd~LDP 381 (482)
+..-||+-+.++.+++. ||++|-+-+..-+.+.+|++.+-
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 66789999999999854 89999999999999999999754
No 149
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=78.33 E-value=2.2 Score=39.48 Aligned_cols=81 Identities=19% Similarity=0.193 Sum_probs=58.8
Q ss_pred EEEeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEccc-ceeeCCceeecccccCCCCCcEE
Q 011589 340 VYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRES-CIFSDGTYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 340 vyV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~-C~~~~g~yiKDLs~LGRdLs~VI 417 (482)
..-.+||++.++|++|.+. +.++|.|......|..+.+.+.... ..++.+. +...+..+.+-++.|+.+.+.|+
T Consensus 124 ~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~ 199 (215)
T PF00702_consen 124 LRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----SIVFARVIGKPEPKIFLRIIKELQVKPGEVA 199 (215)
T ss_dssp EEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----EEEEESHETTTHHHHHHHHHHHHTCTGGGEE
T ss_pred ecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----ccccccccccccchhHHHHHHHHhcCCCEEE
Confidence 3467899999999999976 9999999999999999999998743 2222111 11111133445566787888999
Q ss_pred EEECChh
Q 011589 418 IIDNSPQ 424 (482)
Q Consensus 418 IVDDsp~ 424 (482)
.|-|...
T Consensus 200 ~vGDg~n 206 (215)
T PF00702_consen 200 MVGDGVN 206 (215)
T ss_dssp EEESSGG
T ss_pred EEccCHH
Confidence 9999874
No 150
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=78.02 E-value=3.5 Score=45.80 Aligned_cols=86 Identities=15% Similarity=0.123 Sum_probs=57.7
Q ss_pred EEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEE
Q 011589 341 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAII 419 (482)
Q Consensus 341 yV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g~yiKDLs~LGRdLs~VIIV 419 (482)
.-.+||++.++|+++.+ .++++|-|...+.+|+.+++.+.-+ +|.... ...+...++. +....++++.|
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~--~~~~~~-----p~~K~~~v~~---l~~~~~~v~~V 472 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN--VRAEVL-----PDDKAALIKE---LQEKGRVVAMV 472 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc--EEccCC-----hHHHHHHHHH---HHHcCCEEEEE
Confidence 45689999999999985 5999999999999999999998764 222110 0111122333 33456789999
Q ss_pred ECChhhhccCCCceeee
Q 011589 420 DNSPQVFRLQVNNGIPI 436 (482)
Q Consensus 420 DDsp~~~~~qp~NgIpI 436 (482)
-|...-...-...++.|
T Consensus 473 GDg~nD~~al~~A~vgi 489 (562)
T TIGR01511 473 GDGINDAPALAQADVGI 489 (562)
T ss_pred eCCCccHHHHhhCCEEE
Confidence 99876554322334444
No 151
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=75.72 E-value=3.8 Score=43.23 Aligned_cols=53 Identities=21% Similarity=0.275 Sum_probs=44.1
Q ss_pred eEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHh-C------CCCCeeeeEEE
Q 011589 339 TVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDIL-D------PDGKLISRRVY 391 (482)
Q Consensus 339 ~vyV~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~L-D------P~~klfs~RLy 391 (482)
.-||.+-||+.++|+++.+ .+.+.|-|++...|++.+++.+ + ....+|+..+.
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt 240 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIV 240 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEe
Confidence 3478889999999999985 5999999999999999999997 5 23557765555
No 152
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=75.61 E-value=2 Score=40.54 Aligned_cols=79 Identities=25% Similarity=0.371 Sum_probs=41.9
Q ss_pred EeeCchHHHHHHHhhcc-eEEEEEcCCcHH-H---HH---HHHHHhCCCCCeeeeEEEcccceeeCCceeecccccCCCC
Q 011589 342 VKQRPHLKTFLERVAEM-FEVVIFTASQSI-Y---AA---QLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDL 413 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~-Y---A~---~ILd~LDP~~klfs~RLyRe~C~~~~g~yiKDLs~LGRdL 413 (482)
...=||+.+.|++|.+. +++++-|+.... + +. +.|+.--|. ......++..+ |. .++.|
T Consensus 72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~-i~~~~~~~~~~---------K~--~v~~D- 138 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPF-IPYDNLIFTGD---------KT--LVGGD- 138 (191)
T ss_dssp --B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTH-HHHCCEEEESS---------GG--GC--S-
T ss_pred CCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCC-CchheEEEecC---------CC--eEecc-
Confidence 56679999999999977 577777776554 1 22 223332121 11122222111 22 34443
Q ss_pred CcEEEEECChhhhccCCCceeee
Q 011589 414 AKVAIIDNSPQVFRLQVNNGIPI 436 (482)
Q Consensus 414 s~VIIVDDsp~~~~~qp~NgIpI 436 (482)
|+|||+|.....-...|+++
T Consensus 139 ---vlIDD~~~n~~~~~~~g~~~ 158 (191)
T PF06941_consen 139 ---VLIDDRPHNLEQFANAGIPV 158 (191)
T ss_dssp ---EEEESSSHHHSS-SSESSEE
T ss_pred ---EEecCChHHHHhccCCCceE
Confidence 79999999887655667443
No 153
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=75.10 E-value=1.7 Score=39.88 Aligned_cols=16 Identities=25% Similarity=0.553 Sum_probs=14.1
Q ss_pred ceEEEEecCccccccc
Q 011589 303 SVTLVLDLDETLVHST 318 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (482)
.+.++||+||||+++.
T Consensus 5 ~~~viFD~DGTLiDs~ 20 (188)
T PRK10725 5 YAGLIFDMDGTILDTE 20 (188)
T ss_pred ceEEEEcCCCcCccCH
Confidence 4579999999999986
No 154
>PRK11587 putative phosphatase; Provisional
Probab=73.78 E-value=1.8 Score=41.36 Aligned_cols=15 Identities=47% Similarity=0.596 Sum_probs=13.7
Q ss_pred eEEEEecCccccccc
Q 011589 304 VTLVLDLDETLVHST 318 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (482)
+.++|||||||+++.
T Consensus 4 k~viFDlDGTL~Ds~ 18 (218)
T PRK11587 4 KGFLFDLDGTLVDSL 18 (218)
T ss_pred CEEEEcCCCCcCcCH
Confidence 589999999999986
No 155
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=72.28 E-value=3.4 Score=40.80 Aligned_cols=72 Identities=15% Similarity=0.128 Sum_probs=41.6
Q ss_pred CCceEEEEecCccccccccc----c-----cCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcc-eEEEEEcCCcHH
Q 011589 301 RKSVTLVLDLDETLVHSTLE----Y-----CDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSI 370 (482)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~----~-----~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~ 370 (482)
.++..+|||+||||+..... . ....+|.-.+ .... -..=||+.+|++++.+. ++|++-|.-...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv--~~~~----~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWV--ASGK----APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHH--HCTG----GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHH--hccc----CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 57889999999999865321 0 0111111000 0000 13458899999999955 888888875554
Q ss_pred HHHHHHHH
Q 011589 371 YAAQLLDI 378 (482)
Q Consensus 371 YA~~ILd~ 378 (482)
.-+.-++.
T Consensus 144 ~r~~T~~n 151 (229)
T PF03767_consen 144 QREATEKN 151 (229)
T ss_dssp CHHHHHHH
T ss_pred hHHHHHHH
Confidence 33333333
No 156
>PHA02597 30.2 hypothetical protein; Provisional
Probab=70.89 E-value=2.2 Score=39.91 Aligned_cols=15 Identities=27% Similarity=0.372 Sum_probs=13.0
Q ss_pred eEEEEecCccccccc
Q 011589 304 VTLVLDLDETLVHST 318 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (482)
+.++|||||||++..
T Consensus 3 k~viFDlDGTLiD~~ 17 (197)
T PHA02597 3 PTILTDVDGVLLSWQ 17 (197)
T ss_pred cEEEEecCCceEchh
Confidence 579999999999943
No 157
>PRK11590 hypothetical protein; Provisional
Probab=70.38 E-value=2.5 Score=40.50 Aligned_cols=39 Identities=18% Similarity=0.066 Sum_probs=34.7
Q ss_pred EeeCchHHHHH-HHhh-cceEEEEEcCCcHHHHHHHHHHhC
Q 011589 342 VKQRPHLKTFL-ERVA-EMFEVVIFTASQSIYAAQLLDILD 380 (482)
Q Consensus 342 V~lRPgL~eFL-e~Ls-k~YEIvIfTAs~k~YA~~ILd~LD 380 (482)
+..+||+.+.| +.+. +.+.++|-|++...|+++++..+.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~ 134 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP 134 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence 45689999999 5677 589999999999999999999876
No 158
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=69.93 E-value=2.1 Score=40.20 Aligned_cols=14 Identities=36% Similarity=0.648 Sum_probs=12.6
Q ss_pred EEEEecCccccccc
Q 011589 305 TLVLDLDETLVHST 318 (482)
Q Consensus 305 tLVLDLDeTLVhSs 318 (482)
.++|||||||+.+.
T Consensus 2 ~viFD~DGTLiDs~ 15 (197)
T TIGR01548 2 ALVLDMDGVMADVS 15 (197)
T ss_pred ceEEecCceEEech
Confidence 57999999999986
No 159
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=68.82 E-value=2.7 Score=38.79 Aligned_cols=14 Identities=36% Similarity=0.508 Sum_probs=12.5
Q ss_pred EEEEecCccccccc
Q 011589 305 TLVLDLDETLVHST 318 (482)
Q Consensus 305 tLVLDLDeTLVhSs 318 (482)
+++|||||||+.+.
T Consensus 2 ~viFDlDGTL~ds~ 15 (184)
T TIGR01993 2 VWFFDLDNTLYPHS 15 (184)
T ss_pred eEEEeCCCCCCCCc
Confidence 58999999999875
No 160
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=67.87 E-value=3 Score=39.32 Aligned_cols=15 Identities=33% Similarity=0.731 Sum_probs=13.4
Q ss_pred eEEEEecCccccccc
Q 011589 304 VTLVLDLDETLVHST 318 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (482)
..++|||||||+++.
T Consensus 3 ~~viFDlDGTL~ds~ 17 (221)
T TIGR02253 3 KAIFFDLDDTLIDTS 17 (221)
T ss_pred eEEEEeCCCCCcCCC
Confidence 479999999999985
No 161
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=67.84 E-value=9.5 Score=43.70 Aligned_cols=62 Identities=23% Similarity=0.222 Sum_probs=45.0
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhc--ceEEEEEcCCcHHHHHHHHH
Q 011589 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLD 377 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk--~YEIvIfTAs~k~YA~~ILd 377 (482)
..++.++++|+||||+-....+. .....|.+.+.|++|.+ ...|+|-|.-.....++++.
T Consensus 489 ~~~~rLi~~D~DGTL~~~~~~~~------------------~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~ 550 (726)
T PRK14501 489 AASRRLLLLDYDGTLVPFAPDPE------------------LAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFG 550 (726)
T ss_pred hccceEEEEecCccccCCCCCcc------------------cCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhC
Confidence 45678999999999985421110 11235788999999997 68899999998887777665
Q ss_pred Hh
Q 011589 378 IL 379 (482)
Q Consensus 378 ~L 379 (482)
.+
T Consensus 551 ~~ 552 (726)
T PRK14501 551 DL 552 (726)
T ss_pred CC
Confidence 43
No 162
>PRK11590 hypothetical protein; Provisional
Probab=67.39 E-value=8.1 Score=36.99 Aligned_cols=17 Identities=29% Similarity=0.421 Sum_probs=14.0
Q ss_pred CceEEEEecCccccccc
Q 011589 302 KSVTLVLDLDETLVHST 318 (482)
Q Consensus 302 kK~tLVLDLDeTLVhSs 318 (482)
++++++|||||||++..
T Consensus 5 ~~k~~iFD~DGTL~~~d 21 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD 21 (211)
T ss_pred cceEEEEecCCCCcccc
Confidence 45699999999999554
No 163
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=67.33 E-value=9.5 Score=37.84 Aligned_cols=54 Identities=24% Similarity=0.238 Sum_probs=35.9
Q ss_pred ceEEEEecCcccc-cccccccCCCCceEEEEecceeceEEEeeCchHHHHHH-HhhcceEEEEEcCCcHHHHHHHHHHhC
Q 011589 303 SVTLVLDLDETLV-HSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLE-RVAEMFEVVIFTASQSIYAAQLLDILD 380 (482)
Q Consensus 303 K~tLVLDLDeTLV-hSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe-~Lsk~YEIvIfTAs~k~YA~~ILd~LD 380 (482)
++.||-||||||+ ... .-+.-+.++|+ ......-+++-|..+..-+..++....
T Consensus 2 ~~ll~sDlD~Tl~~~~~------------------------~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~ 57 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGDD------------------------EALARLEELLEQQARPEILFVYVTGRSLESVLRLLREYN 57 (247)
T ss_dssp SEEEEEETBTTTBHCHH------------------------HHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT
T ss_pred CEEEEEECCCCCcCCCH------------------------HHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhCC
Confidence 6799999999998 211 11344556666 344557777778888888888887643
No 164
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=66.50 E-value=3.1 Score=39.37 Aligned_cols=15 Identities=33% Similarity=0.412 Sum_probs=13.4
Q ss_pred eEEEEecCccccccc
Q 011589 304 VTLVLDLDETLVHST 318 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (482)
++++||+||||+.+.
T Consensus 2 k~iiFD~DGTL~ds~ 16 (220)
T TIGR03351 2 SLVVLDMAGTTVDED 16 (220)
T ss_pred cEEEEecCCCeeccC
Confidence 478999999999986
No 165
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=66.07 E-value=3.1 Score=37.95 Aligned_cols=15 Identities=20% Similarity=0.576 Sum_probs=13.5
Q ss_pred eEEEEecCccccccc
Q 011589 304 VTLVLDLDETLVHST 318 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (482)
++++||+||||+.+.
T Consensus 2 ~~iiFD~DGTL~ds~ 16 (185)
T TIGR02009 2 KAVIFDMDGVIVDTA 16 (185)
T ss_pred CeEEEcCCCcccCCh
Confidence 478999999999986
No 166
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=65.17 E-value=3.1 Score=40.21 Aligned_cols=16 Identities=38% Similarity=0.598 Sum_probs=14.1
Q ss_pred ceEEEEecCccccccc
Q 011589 303 SVTLVLDLDETLVHST 318 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (482)
.+.++||+||||+.+.
T Consensus 12 ~k~viFD~DGTL~Ds~ 27 (229)
T PRK13226 12 PRAVLFDLDGTLLDSA 27 (229)
T ss_pred CCEEEEcCcCccccCH
Confidence 3589999999999986
No 167
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=65.07 E-value=9.8 Score=42.13 Aligned_cols=87 Identities=15% Similarity=0.091 Sum_probs=59.7
Q ss_pred EEeeCchHHHHHHHhhc-c-eEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEE
Q 011589 341 YVKQRPHLKTFLERVAE-M-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 418 (482)
Q Consensus 341 yV~lRPgL~eFLe~Lsk-~-YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g~yiKDLs~LGRdLs~VII 418 (482)
....|||+.+.|++|.+ . ++++|-|...+.+|+.+++.++-.. +|....- ..+...++ .++....+++.
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~-~f~~~~p-----~~K~~~v~---~l~~~~~~v~~ 452 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE-VHAELLP-----EDKLAIVK---ELQEEGGVVAM 452 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-eeccCCH-----HHHHHHHH---HHHHcCCEEEE
Confidence 46689999999999974 5 8999999999999999999998854 4432110 01112233 33445568999
Q ss_pred EECChhhhccCCCceeee
Q 011589 419 IDNSPQVFRLQVNNGIPI 436 (482)
Q Consensus 419 VDDsp~~~~~qp~NgIpI 436 (482)
|-|...-...-...++-|
T Consensus 453 vGDg~nD~~al~~A~vgi 470 (556)
T TIGR01525 453 VGDGINDAPALAAADVGI 470 (556)
T ss_pred EECChhHHHHHhhCCEeE
Confidence 999987554322334433
No 168
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=64.44 E-value=3.9 Score=39.88 Aligned_cols=15 Identities=20% Similarity=0.215 Sum_probs=13.3
Q ss_pred eEEEEecCccccccc
Q 011589 304 VTLVLDLDETLVHST 318 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (482)
+.++||+||||+.+.
T Consensus 3 k~viFD~DGTLiDs~ 17 (253)
T TIGR01422 3 EAVIFDWAGTTVDFG 17 (253)
T ss_pred eEEEEeCCCCeecCC
Confidence 589999999999974
No 169
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=64.23 E-value=15 Score=35.53 Aligned_cols=38 Identities=13% Similarity=0.038 Sum_probs=33.7
Q ss_pred EeeCchHHHHHH-Hhh-cceEEEEEcCCcHHHHHHHHHHh
Q 011589 342 VKQRPHLKTFLE-RVA-EMFEVVIFTASQSIYAAQLLDIL 379 (482)
Q Consensus 342 V~lRPgL~eFLe-~Ls-k~YEIvIfTAs~k~YA~~ILd~L 379 (482)
+.++||+.+.|+ .+. +.+.++|-|++...|++++.+..
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~ 132 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS 132 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc
Confidence 367999999995 777 68999999999999999999774
No 170
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=63.98 E-value=21 Score=36.23 Aligned_cols=58 Identities=19% Similarity=0.224 Sum_probs=40.5
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCC
Q 011589 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP 381 (482)
.+++++|||+|||-...+..+ +..-+.++. ..|+||..|+-++.-...+-+.|+.
T Consensus 7 ~~lIFtDlD~TLl~~~ye~~p------------------------A~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v 62 (274)
T COG3769 7 PLLIFTDLDGTLLPHSYEWQP------------------------AAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGV 62 (274)
T ss_pred ceEEEEcccCcccCCCCCCCc------------------------cchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCC
Confidence 468889999999974433211 123345555 5699999999888777777788888
Q ss_pred CCC
Q 011589 382 DGK 384 (482)
Q Consensus 382 ~~k 384 (482)
++.
T Consensus 63 ~~~ 65 (274)
T COG3769 63 QGL 65 (274)
T ss_pred CCC
Confidence 753
No 171
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=63.68 E-value=4 Score=39.76 Aligned_cols=16 Identities=38% Similarity=0.551 Sum_probs=13.7
Q ss_pred ceEEEEecCccccccc
Q 011589 303 SVTLVLDLDETLVHST 318 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (482)
-+.++|||||||+.+.
T Consensus 10 ~k~iiFDlDGTL~D~~ 25 (238)
T PRK10748 10 ISALTFDLDDTLYDNR 25 (238)
T ss_pred ceeEEEcCcccccCCh
Confidence 3589999999999974
No 172
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=63.66 E-value=3.6 Score=38.48 Aligned_cols=14 Identities=21% Similarity=0.211 Sum_probs=12.6
Q ss_pred EEEEecCccccccc
Q 011589 305 TLVLDLDETLVHST 318 (482)
Q Consensus 305 tLVLDLDeTLVhSs 318 (482)
.++|||||||+.+.
T Consensus 2 ~viFDlDGTL~d~~ 15 (203)
T TIGR02252 2 LITFDAVGTLLALK 15 (203)
T ss_pred eEEEecCCceeeeC
Confidence 68999999999875
No 173
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=63.52 E-value=4.4 Score=40.62 Aligned_cols=19 Identities=21% Similarity=0.368 Sum_probs=16.2
Q ss_pred CCCceEEEEecCccccccc
Q 011589 300 GRKSVTLVLDLDETLVHST 318 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs 318 (482)
.+..+.+||||||||++|.
T Consensus 21 ~~~~k~vIFDlDGTLvDS~ 39 (260)
T PLN03243 21 GCGWLGVVLEWEGVIVEDD 39 (260)
T ss_pred cCCceEEEEeCCCceeCCc
Confidence 4566789999999999984
No 174
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=63.34 E-value=4 Score=40.06 Aligned_cols=16 Identities=31% Similarity=0.453 Sum_probs=14.0
Q ss_pred ceEEEEecCccccccc
Q 011589 303 SVTLVLDLDETLVHST 318 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (482)
-+.++|||||||+.+.
T Consensus 22 ~k~viFDlDGTLiDs~ 37 (248)
T PLN02770 22 LEAVLFDVDGTLCDSD 37 (248)
T ss_pred cCEEEEcCCCccCcCH
Confidence 3589999999999986
No 175
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=63.12 E-value=4 Score=40.37 Aligned_cols=16 Identities=19% Similarity=0.173 Sum_probs=13.9
Q ss_pred ceEEEEecCccccccc
Q 011589 303 SVTLVLDLDETLVHST 318 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (482)
-++++||+||||+.+.
T Consensus 4 ~k~vIFDlDGTLiDs~ 19 (267)
T PRK13478 4 IQAVIFDWAGTTVDFG 19 (267)
T ss_pred eEEEEEcCCCCeecCC
Confidence 3589999999999984
No 176
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=62.85 E-value=4.4 Score=40.62 Aligned_cols=16 Identities=44% Similarity=0.576 Sum_probs=14.1
Q ss_pred ceEEEEecCccccccc
Q 011589 303 SVTLVLDLDETLVHST 318 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (482)
.+.++|||||||+++.
T Consensus 13 ~k~viFDlDGTL~Ds~ 28 (272)
T PRK13223 13 PRLVMFDLDGTLVDSV 28 (272)
T ss_pred CCEEEEcCCCccccCH
Confidence 3499999999999985
No 177
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=62.34 E-value=3.3 Score=36.84 Aligned_cols=14 Identities=43% Similarity=0.776 Sum_probs=12.4
Q ss_pred EEEEecCccccccc
Q 011589 305 TLVLDLDETLVHST 318 (482)
Q Consensus 305 tLVLDLDeTLVhSs 318 (482)
+++||+||||+++.
T Consensus 1 ~iifD~DGTL~d~~ 14 (154)
T TIGR01549 1 AILFDIDGTLVDSS 14 (154)
T ss_pred CeEecCCCcccccH
Confidence 47999999999985
No 178
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=61.75 E-value=11 Score=36.46 Aligned_cols=53 Identities=19% Similarity=0.136 Sum_probs=32.3
Q ss_pred EEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCC
Q 011589 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDP 381 (482)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA~~ILd~LDP 381 (482)
++++||||||++.... +.|. .+-|+...+...++|-|.-...-+..++..++.
T Consensus 1 li~~DlDgTLl~~~~~-----------------------~~~~-~~~~~~~~~gi~~viaTGR~~~~v~~~~~~l~l 53 (236)
T TIGR02471 1 LIITDLDNTLLGDDEG-----------------------LASF-VELLRGSGDAVGFGIATGRSVESAKSRYAKLNL 53 (236)
T ss_pred CeEEeccccccCCHHH-----------------------HHHH-HHHHHhcCCCceEEEEeCCCHHHHHHHHHhCCC
Confidence 3788999999974210 1111 133443334566777777777777777777654
No 179
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=60.23 E-value=19 Score=37.14 Aligned_cols=91 Identities=11% Similarity=0.135 Sum_probs=50.7
Q ss_pred CceEEEEecCccccccccccc----CCCCceEEEEec-ceeceEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHH
Q 011589 302 KSVTLVLDLDETLVHSTLEYC----DDADFTFTVFFN-MKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQL 375 (482)
Q Consensus 302 kK~tLVLDLDeTLVhSs~~~~----~~~df~~~v~~~-~~~~~vyV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~I 375 (482)
++..+|||+|||++....... ....|.- ..+. .-...--...=|++.+|++++. ..+.|++.|.-....-+.=
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~-~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDS-ELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCCh-hhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHH
Confidence 467999999999995431110 0111110 0000 0000001233589999999997 5599999998887665555
Q ss_pred HHHhCCCCCe-eeeEEEcc
Q 011589 376 LDILDPDGKL-ISRRVYRE 393 (482)
Q Consensus 376 Ld~LDP~~kl-fs~RLyRe 393 (482)
++.|.-.|-. ..+.+.|.
T Consensus 179 ~~NL~kaGy~~~~~LiLR~ 197 (275)
T TIGR01680 179 EANLKKAGYHTWEKLILKD 197 (275)
T ss_pred HHHHHHcCCCCcceeeecC
Confidence 6666555511 23444564
No 180
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=60.22 E-value=4.2 Score=37.04 Aligned_cols=14 Identities=21% Similarity=0.605 Sum_probs=12.5
Q ss_pred EEEEecCccccccc
Q 011589 305 TLVLDLDETLVHST 318 (482)
Q Consensus 305 tLVLDLDeTLVhSs 318 (482)
.++||+||||+.+.
T Consensus 1 ~iiFD~DGTL~ds~ 14 (185)
T TIGR01990 1 AVIFDLDGVITDTA 14 (185)
T ss_pred CeEEcCCCccccCh
Confidence 37999999999987
No 181
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=60.02 E-value=3.6 Score=38.69 Aligned_cols=13 Identities=54% Similarity=0.708 Sum_probs=11.8
Q ss_pred EEEecCccccccc
Q 011589 306 LVLDLDETLVHST 318 (482)
Q Consensus 306 LVLDLDeTLVhSs 318 (482)
+||||||||+.+.
T Consensus 1 iiFDlDGTL~Ds~ 13 (205)
T TIGR01454 1 VVFDLDGVLVDSF 13 (205)
T ss_pred CeecCcCccccCH
Confidence 5899999999986
No 182
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=58.95 E-value=5.7 Score=37.85 Aligned_cols=17 Identities=24% Similarity=0.505 Sum_probs=14.4
Q ss_pred CceEEEEecCccccccc
Q 011589 302 KSVTLVLDLDETLVHST 318 (482)
Q Consensus 302 kK~tLVLDLDeTLVhSs 318 (482)
+.+.++||+||||+++.
T Consensus 6 ~~k~iiFD~DGTL~d~~ 22 (222)
T PRK10826 6 QILAAIFDMDGLLIDSE 22 (222)
T ss_pred cCcEEEEcCCCCCCcCH
Confidence 35689999999999885
No 183
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=58.61 E-value=5.4 Score=40.40 Aligned_cols=18 Identities=28% Similarity=0.381 Sum_probs=15.1
Q ss_pred CCceEEEEecCccccccc
Q 011589 301 RKSVTLVLDLDETLVHST 318 (482)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs 318 (482)
.+-..+|||+||||+.+.
T Consensus 38 ~~~k~VIFDlDGTLvDS~ 55 (286)
T PLN02779 38 ALPEALLFDCDGVLVETE 55 (286)
T ss_pred cCCcEEEEeCceeEEccc
Confidence 334689999999999987
No 184
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=58.40 E-value=5.9 Score=36.53 Aligned_cols=16 Identities=31% Similarity=0.439 Sum_probs=13.3
Q ss_pred ceEEEEecCccccccc
Q 011589 303 SVTLVLDLDETLVHST 318 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (482)
.+++|+|+||||+...
T Consensus 4 ~k~viFD~DGTLid~~ 19 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVM 19 (201)
T ss_pred ceEEEEeCCCCCcCCc
Confidence 3589999999999853
No 185
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=58.20 E-value=8.1 Score=42.68 Aligned_cols=88 Identities=14% Similarity=0.123 Sum_probs=61.2
Q ss_pred EEEeeCchHHHHHHHhhc-ce-EEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEE
Q 011589 340 VYVKQRPHLKTFLERVAE-MF-EVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVA 417 (482)
Q Consensus 340 vyV~lRPgL~eFLe~Lsk-~Y-EIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g~yiKDLs~LGRdLs~VI 417 (482)
..-..|||+.+.|++|.+ .+ +++|-|...+.+|+.+++.+...+ +|..... ....+-++.++...++++
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-~f~~~~p--------~~K~~~i~~l~~~~~~v~ 429 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-VHAELLP--------EDKLEIVKELREKYGPVA 429 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-hhhccCc--------HHHHHHHHHHHhcCCEEE
Confidence 346789999999999996 48 999999999999999999998764 3421111 111223344556668999
Q ss_pred EEECChhhhccCCCceeee
Q 011589 418 IIDNSPQVFRLQVNNGIPI 436 (482)
Q Consensus 418 IVDDsp~~~~~qp~NgIpI 436 (482)
.|-|...-...-...++.|
T Consensus 430 ~vGDg~nD~~al~~A~vgi 448 (536)
T TIGR01512 430 MVGDGINDAPALAAADVGI 448 (536)
T ss_pred EEeCCHHHHHHHHhCCEEE
Confidence 9999986554322334433
No 186
>PRK09449 dUMP phosphatase; Provisional
Probab=57.92 E-value=5.1 Score=38.02 Aligned_cols=14 Identities=43% Similarity=0.520 Sum_probs=12.3
Q ss_pred eEEEEecCcccccc
Q 011589 304 VTLVLDLDETLVHS 317 (482)
Q Consensus 304 ~tLVLDLDeTLVhS 317 (482)
++++|||||||++.
T Consensus 4 k~iiFDlDGTLid~ 17 (224)
T PRK09449 4 DWILFDADETLFHF 17 (224)
T ss_pred cEEEEcCCCchhcc
Confidence 58999999999974
No 187
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=57.85 E-value=5.2 Score=37.54 Aligned_cols=15 Identities=40% Similarity=0.654 Sum_probs=13.3
Q ss_pred eEEEEecCccccccc
Q 011589 304 VTLVLDLDETLVHST 318 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (482)
+.++||+||||+++.
T Consensus 2 k~viFD~DGTL~d~~ 16 (224)
T TIGR02254 2 KTLLFDLDDTILDFQ 16 (224)
T ss_pred CEEEEcCcCcccccc
Confidence 479999999999975
No 188
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=57.84 E-value=4.1 Score=38.11 Aligned_cols=13 Identities=54% Similarity=0.802 Sum_probs=11.6
Q ss_pred EEEecCccccccc
Q 011589 306 LVLDLDETLVHST 318 (482)
Q Consensus 306 LVLDLDeTLVhSs 318 (482)
+|||+||||+.+.
T Consensus 1 viFD~DGTL~Ds~ 13 (213)
T TIGR01449 1 VLFDLDGTLVDSA 13 (213)
T ss_pred CeecCCCccccCH
Confidence 5899999999976
No 189
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=57.26 E-value=5.5 Score=37.14 Aligned_cols=15 Identities=33% Similarity=0.377 Sum_probs=13.1
Q ss_pred eEEEEecCccccccc
Q 011589 304 VTLVLDLDETLVHST 318 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (482)
+.++||+||||+++.
T Consensus 2 k~viFD~dgTLiD~~ 16 (198)
T TIGR01428 2 KALVFDVYGTLFDVH 16 (198)
T ss_pred cEEEEeCCCcCccHH
Confidence 378999999999975
No 190
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=56.80 E-value=5.5 Score=37.51 Aligned_cols=15 Identities=47% Similarity=0.627 Sum_probs=13.2
Q ss_pred eEEEEecCccccccc
Q 011589 304 VTLVLDLDETLVHST 318 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (482)
..++||+||||+++.
T Consensus 7 ~~iiFD~DGTL~d~~ 21 (226)
T PRK13222 7 RAVAFDLDGTLVDSA 21 (226)
T ss_pred cEEEEcCCcccccCH
Confidence 489999999999874
No 191
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=56.77 E-value=6.2 Score=37.16 Aligned_cols=15 Identities=20% Similarity=0.419 Sum_probs=13.1
Q ss_pred eEEEEecCccccccc
Q 011589 304 VTLVLDLDETLVHST 318 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (482)
+.++|||||||+++.
T Consensus 3 k~viFDldGtL~d~~ 17 (211)
T TIGR02247 3 KAVIFDFGGVLLPSP 17 (211)
T ss_pred eEEEEecCCceecCH
Confidence 479999999999874
No 192
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=56.72 E-value=5.4 Score=36.27 Aligned_cols=13 Identities=38% Similarity=0.516 Sum_probs=11.9
Q ss_pred EEEecCccccccc
Q 011589 306 LVLDLDETLVHST 318 (482)
Q Consensus 306 LVLDLDeTLVhSs 318 (482)
|+|||||||+.+.
T Consensus 2 viFD~DGTL~D~~ 14 (175)
T TIGR01493 2 MVFDVYGTLVDVH 14 (175)
T ss_pred eEEecCCcCcccH
Confidence 7899999999986
No 193
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=56.49 E-value=25 Score=33.34 Aligned_cols=80 Identities=20% Similarity=0.325 Sum_probs=50.0
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHH------HHHHHH---hCCCCCeeeeEEEcccceeeCCceeecccccCCC
Q 011589 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYA------AQLLDI---LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVD 412 (482)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~k~YA------~~ILd~---LDP~~klfs~RLyRe~C~~~~g~yiKDLs~LGRd 412 (482)
...-||+++-+++|-++|+|+|-||++..+- +.+.+. |++++ .++ | ...+.+|
T Consensus 67 L~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn-----~vf---C--gnKnivk-------- 128 (180)
T COG4502 67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQN-----IVF---C--GNKNIVK-------- 128 (180)
T ss_pred cCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhh-----EEE---e--cCCCeEE--------
Confidence 5668999999999999999999999955432 233333 23322 222 1 1112222
Q ss_pred CCcEEEEECChhhhccCCCceeeeccccC
Q 011589 413 LAKVAIIDNSPQVFRLQVNNGIPIESWFD 441 (482)
Q Consensus 413 Ls~VIIVDDsp~~~~~qp~NgIpI~~w~g 441 (482)
-=++|||.|.......+|-|....-++
T Consensus 129 --aDilIDDnp~nLE~F~G~kIlFdA~HN 155 (180)
T COG4502 129 --ADILIDDNPLNLENFKGNKILFDAHHN 155 (180)
T ss_pred --eeEEecCCchhhhhccCceEEEecccc
Confidence 136899999877666666666555444
No 194
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=55.81 E-value=5.6 Score=34.95 Aligned_cols=13 Identities=46% Similarity=0.828 Sum_probs=11.7
Q ss_pred EEEecCccccccc
Q 011589 306 LVLDLDETLVHST 318 (482)
Q Consensus 306 LVLDLDeTLVhSs 318 (482)
++||+||||+++.
T Consensus 1 iifD~dgtL~d~~ 13 (176)
T PF13419_consen 1 IIFDLDGTLVDTD 13 (176)
T ss_dssp EEEESBTTTEEHH
T ss_pred cEEECCCCcEeCH
Confidence 6899999999875
No 195
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=54.88 E-value=6.7 Score=37.19 Aligned_cols=16 Identities=38% Similarity=0.424 Sum_probs=13.8
Q ss_pred ceEEEEecCccccccc
Q 011589 303 SVTLVLDLDETLVHST 318 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (482)
.+.++||+||||+.+.
T Consensus 4 ~~~viFD~DGTL~d~~ 19 (221)
T PRK10563 4 IEAVFFDCDGTLVDSE 19 (221)
T ss_pred CCEEEECCCCCCCCCh
Confidence 3589999999999875
No 196
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=53.46 E-value=11 Score=34.31 Aligned_cols=47 Identities=17% Similarity=0.260 Sum_probs=37.8
Q ss_pred eCchHH----HHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCC-CeeeeEE
Q 011589 344 QRPHLK----TFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRV 390 (482)
Q Consensus 344 lRPgL~----eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~-klfs~RL 390 (482)
++|++. +||+++. +.++++|-|++...+++.+++.+.-.. ..+..++
T Consensus 86 ~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~ 138 (192)
T PF12710_consen 86 LFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL 138 (192)
T ss_dssp HCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE
T ss_pred cCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee
Confidence 457777 9999985 779999999999999999999887654 2445555
No 197
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=52.26 E-value=8.8 Score=38.62 Aligned_cols=82 Identities=13% Similarity=0.035 Sum_probs=63.1
Q ss_pred EEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcE
Q 011589 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKV 416 (482)
Q Consensus 341 yV~lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~---g~yiKDLs~LGRdLs~V 416 (482)
+....|-+ ++|++++ +.+.|.|.|....++= .++..+... .+|++.+..-.-...+ ..|.+-|..+|..++.+
T Consensus 112 ~~~~~~~~-~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~-~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~ 188 (237)
T KOG3085|consen 112 WKYLDGMQ-ELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLS-AYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEEC 188 (237)
T ss_pred ceeccHHH-HHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHH-HhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHe
Confidence 45555555 9999999 5589999999998887 777777776 5888877632222222 36788889999999999
Q ss_pred EEEECChhh
Q 011589 417 AIIDNSPQV 425 (482)
Q Consensus 417 IIVDDsp~~ 425 (482)
|.|||....
T Consensus 189 vhIgD~l~n 197 (237)
T KOG3085|consen 189 VHIGDLLEN 197 (237)
T ss_pred EEecCcccc
Confidence 999999987
No 198
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=51.61 E-value=6.7 Score=35.42 Aligned_cols=13 Identities=38% Similarity=0.769 Sum_probs=12.0
Q ss_pred EEEecCccccccc
Q 011589 306 LVLDLDETLVHST 318 (482)
Q Consensus 306 LVLDLDeTLVhSs 318 (482)
++|||||||+.+.
T Consensus 2 vlFDlDgtLv~~~ 14 (183)
T TIGR01509 2 ILFDLDGVLVDTS 14 (183)
T ss_pred eeeccCCceechH
Confidence 7999999999985
No 199
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=51.07 E-value=36 Score=32.29 Aligned_cols=62 Identities=18% Similarity=0.262 Sum_probs=40.2
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHh
Q 011589 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDIL 379 (482)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~L 379 (482)
+|.|+||||--|-.. ....++ .... +.|||+-++..++.+. |.++=-|+-.--.|...-+.|
T Consensus 2 VvsDIDGTiT~SD~~-----G~i~~~----~G~d---~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L 64 (157)
T PF08235_consen 2 VVSDIDGTITKSDVL-----GHILPI----LGKD---WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWL 64 (157)
T ss_pred EEEeccCCcCccchh-----hhhhhc----cCch---hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHH
Confidence 688999999776310 000110 1111 6799999999999955 888777887666665544444
No 200
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=47.95 E-value=20 Score=36.31 Aligned_cols=100 Identities=18% Similarity=0.232 Sum_probs=57.0
Q ss_pred EEeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhC---CCCCeeeeEEEcccce----eeC---Cceeeccccc
Q 011589 341 YVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILD---PDGKLISRRVYRESCI----FSD---GTYTKDLTVL 409 (482)
Q Consensus 341 yV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~YA~~ILd~LD---P~~klfs~RLyRe~C~----~~~---g~yiKDLs~L 409 (482)
.+.+|.|+.+|++.|.++ --+.|||||...-.+.+|+.-. |.=+.++..+.=+.-. +.. ..|-|+-..+
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 488999999999999976 7999999999999999999853 2224455555422111 111 1233443333
Q ss_pred --------CCCCCcEEEEECChhhhcc-----CCCceeeecccc
Q 011589 410 --------GVDLAKVAIIDNSPQVFRL-----QVNNGIPIESWF 440 (482)
Q Consensus 410 --------GRdLs~VIIVDDsp~~~~~-----qp~NgIpI~~w~ 440 (482)
-....|||++=|+..-..+ ..+|.|.|.=..
T Consensus 168 ~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn 211 (246)
T PF05822_consen 168 EDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLN 211 (246)
T ss_dssp TTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-
T ss_pred cCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecc
Confidence 1356889999999875533 335666664443
No 201
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=47.69 E-value=27 Score=33.89 Aligned_cols=50 Identities=22% Similarity=0.163 Sum_probs=29.7
Q ss_pred EEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcceE--EEEEcCCcHHHHHH
Q 011589 307 VLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE--VVIFTASQSIYAAQ 374 (482)
Q Consensus 307 VLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YE--IvIfTAs~k~YA~~ 374 (482)
.||.||||.-....+ --.+.-|++.+.|++|++... |+|-|.-...-.+.
T Consensus 1 ~lDyDGTL~p~~~~p------------------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~ 52 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP------------------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLER 52 (235)
T ss_dssp EEE-TTTSS---S-G------------------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHH
T ss_pred CcccCCccCCCCCCc------------------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHH
Confidence 589999997543221 124567999999999998876 77888777766333
No 202
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=45.89 E-value=35 Score=40.30 Aligned_cols=60 Identities=17% Similarity=0.114 Sum_probs=39.7
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh--cceEEEEEcCCcHHHHHHHHH
Q 011589 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA--EMFEVVIFTASQSIYAAQLLD 377 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls--k~YEIvIfTAs~k~YA~~ILd 377 (482)
..++..|+||+||||+..... -+..-|++.+-|++|+ +...++|-|.-...-.++++.
T Consensus 593 ~~~~rlI~LDyDGTLlp~~~~--------------------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 593 RTTTRAILLDYDGTLMPQASI--------------------DKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred hhcCeEEEEecCCcccCCccc--------------------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 345788999999999954210 0122467888888875 346777777777776666664
Q ss_pred Hh
Q 011589 378 IL 379 (482)
Q Consensus 378 ~L 379 (482)
.+
T Consensus 653 ~~ 654 (854)
T PLN02205 653 PC 654 (854)
T ss_pred CC
Confidence 44
No 203
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=44.66 E-value=37 Score=39.76 Aligned_cols=64 Identities=17% Similarity=0.147 Sum_probs=45.1
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcc--eEEEEEcCCcHHHHHHHHH
Q 011589 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM--FEVVIFTASQSIYAAQLLD 377 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~--YEIvIfTAs~k~YA~~ILd 377 (482)
..++..|+||.||||+.....+. ...-+..-|++.+-|+.|++. -.|+|-|.-...-.++++.
T Consensus 504 ~a~~rll~LDyDGTL~~~~~~~~---------------~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 568 (797)
T PLN03063 504 KSNNRLLILGFYGTLTEPRNSQI---------------KEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFG 568 (797)
T ss_pred hccCeEEEEecCccccCCCCCcc---------------ccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhC
Confidence 44567899999999985321110 111244568999999999864 7888999888887777775
Q ss_pred H
Q 011589 378 I 378 (482)
Q Consensus 378 ~ 378 (482)
.
T Consensus 569 ~ 569 (797)
T PLN03063 569 E 569 (797)
T ss_pred C
Confidence 4
No 204
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=43.16 E-value=9.6 Score=41.07 Aligned_cols=15 Identities=33% Similarity=0.643 Sum_probs=13.7
Q ss_pred eEEEEecCccccccc
Q 011589 304 VTLVLDLDETLVHST 318 (482)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (482)
..++|||||||+++.
T Consensus 242 k~vIFDlDGTLiDs~ 256 (459)
T PRK06698 242 QALIFDMDGTLFQTD 256 (459)
T ss_pred hheeEccCCceecch
Confidence 579999999999986
No 205
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=43.13 E-value=46 Score=30.83 Aligned_cols=71 Identities=23% Similarity=0.287 Sum_probs=46.3
Q ss_pred EEecceeceEEEeeCchHHHHHHHhhcc-eEEEEEcCCcHH-HHHHHHHHhCCCCCeeeeEEEcccceeeCCceeecccc
Q 011589 331 VFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSI-YAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTV 408 (482)
Q Consensus 331 v~~~~~~~~vyV~lRPgL~eFLe~Lsk~-YEIvIfTAs~k~-YA~~ILd~LDP~~klfs~RLyRe~C~~~~g~yiKDLs~ 408 (482)
|.+.+++ ..++.+.++++.+.+. +.+.|+|.+... --+.++..+|- ...|.|+++|..
T Consensus 65 Vt~SGGE-----l~~~~l~~ll~~lk~~Gl~i~l~Tg~~~~~~~~~il~~iD~---------------l~~g~y~~~~~~ 124 (147)
T TIGR02826 65 VLFLGGE-----WNREALLSLLKIFKEKGLKTCLYTGLEPKDIPLELVQHLDY---------------LKTGRWIHTRGG 124 (147)
T ss_pred EEEechh-----cCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhCCE---------------EEEChHHHHcCC
Confidence 5556666 3678999999999864 899999986542 23345555442 245666666665
Q ss_pred cCCCCCcEEEEEC
Q 011589 409 LGVDLAKVAIIDN 421 (482)
Q Consensus 409 LGRdLs~VIIVDD 421 (482)
+++.-+|=.|+|-
T Consensus 125 ~~~~~sNQ~~~~~ 137 (147)
T TIGR02826 125 LGSPTTNQIFIDL 137 (147)
T ss_pred CCCCCcCceEEEC
Confidence 5554457777774
No 206
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=41.67 E-value=14 Score=39.64 Aligned_cols=18 Identities=0% Similarity=0.172 Sum_probs=15.5
Q ss_pred CCceEEEEecCccccccc
Q 011589 301 RKSVTLVLDLDETLVHST 318 (482)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs 318 (482)
.+-+.+|||||||||.+.
T Consensus 129 ~~~~~VIFDlDGTLIDS~ 146 (381)
T PLN02575 129 CGWLGAIFEWEGVIIEDN 146 (381)
T ss_pred CCCCEEEEcCcCcceeCH
Confidence 466789999999999875
No 207
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=41.49 E-value=73 Score=29.95 Aligned_cols=66 Identities=26% Similarity=0.329 Sum_probs=38.0
Q ss_pred eCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECC
Q 011589 344 QRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNS 422 (482)
Q Consensus 344 lRPgL~eFLe~Ls-k~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g~yiKDLs~LGRdLs~VIIVDDs 422 (482)
.|-.+.+||+.+. +.-.|++|-|+.+-. .+|..++...+++ ..+||++
T Consensus 53 ~~~~l~~~L~~~~~~gk~I~~yGA~~kg~--tlln~~g~~~~~I-----------------------------~~vvD~n 101 (160)
T PF08484_consen 53 SKAELREFLEKLKAEGKRIAGYGAGAKGN--TLLNYFGLDNDLI-----------------------------DYVVDDN 101 (160)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE---SHHH--HHHHHHT--TTTS-------------------------------EEES-
T ss_pred HHHHHHHHHHHHHHcCCEEEEECcchHHH--HHHHHhCCCccee-----------------------------EEEEeCC
Confidence 4666788888887 456799999998765 4677777655444 2478888
Q ss_pred hhhh-ccCCCceeeecccc
Q 011589 423 PQVF-RLQVNNGIPIESWF 440 (482)
Q Consensus 423 p~~~-~~qp~NgIpI~~w~ 440 (482)
|.+. .+-|..+|||.+..
T Consensus 102 p~K~G~~~PGt~ipI~~p~ 120 (160)
T PF08484_consen 102 PLKQGKYLPGTHIPIVSPE 120 (160)
T ss_dssp GGGTTEE-TTT--EEEEGG
T ss_pred hhhcCcccCCCCCeECCHH
Confidence 8877 44677788887764
No 208
>PLN02382 probable sucrose-phosphatase
Probab=41.17 E-value=71 Score=34.43 Aligned_cols=17 Identities=35% Similarity=0.530 Sum_probs=14.3
Q ss_pred CCceEEEEecCcccccc
Q 011589 301 RKSVTLVLDLDETLVHS 317 (482)
Q Consensus 301 ~kK~tLVLDLDeTLVhS 317 (482)
.+++.||.||||||+..
T Consensus 7 ~~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCCEEEEEcCCCcCcCC
Confidence 45789999999999965
No 209
>PLN02940 riboflavin kinase
Probab=39.96 E-value=18 Score=38.42 Aligned_cols=16 Identities=38% Similarity=0.630 Sum_probs=13.9
Q ss_pred ceEEEEecCccccccc
Q 011589 303 SVTLVLDLDETLVHST 318 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (482)
-+.++||+||||+.+.
T Consensus 11 ik~VIFDlDGTLvDt~ 26 (382)
T PLN02940 11 VSHVILDLDGTLLNTD 26 (382)
T ss_pred CCEEEECCcCcCCcCH
Confidence 4579999999999986
No 210
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=39.68 E-value=16 Score=35.02 Aligned_cols=16 Identities=25% Similarity=0.515 Sum_probs=13.5
Q ss_pred ceEEEEecCccccccc
Q 011589 303 SVTLVLDLDETLVHST 318 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (482)
++++++|+||||+...
T Consensus 3 ~~~vifDfDgTi~~~d 18 (219)
T PRK09552 3 SIQIFCDFDGTITNND 18 (219)
T ss_pred CcEEEEcCCCCCCcch
Confidence 4589999999998764
No 211
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=38.63 E-value=19 Score=33.85 Aligned_cols=16 Identities=31% Similarity=0.463 Sum_probs=13.8
Q ss_pred ceEEEEecCccccccc
Q 011589 303 SVTLVLDLDETLVHST 318 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (482)
.+.++||+||||++..
T Consensus 4 ~k~i~FD~d~TL~d~~ 19 (229)
T COG1011 4 IKAILFDLDGTLLDFD 19 (229)
T ss_pred eeEEEEecCCcccccc
Confidence 4689999999999974
No 212
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=37.88 E-value=18 Score=35.07 Aligned_cols=16 Identities=31% Similarity=0.436 Sum_probs=13.7
Q ss_pred ceEEEEecCccccccc
Q 011589 303 SVTLVLDLDETLVHST 318 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (482)
++..++|+||||++.-
T Consensus 5 ~~la~FDfDgTLt~~d 20 (210)
T TIGR01545 5 KRIIFFDLDGTLHQQD 20 (210)
T ss_pred CcEEEEcCCCCCccCc
Confidence 5688999999999874
No 213
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=37.20 E-value=19 Score=33.85 Aligned_cols=14 Identities=21% Similarity=0.437 Sum_probs=12.4
Q ss_pred EEEEecCccccccc
Q 011589 305 TLVLDLDETLVHST 318 (482)
Q Consensus 305 tLVLDLDeTLVhSs 318 (482)
++||||||||++..
T Consensus 2 ~viFDldgvL~d~~ 15 (199)
T PRK09456 2 LYIFDLGNVIVDID 15 (199)
T ss_pred EEEEeCCCccccCc
Confidence 68999999999874
No 214
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=34.82 E-value=72 Score=38.25 Aligned_cols=71 Identities=15% Similarity=0.178 Sum_probs=48.1
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcc--eEEEEEcCCcHHHHHHHHH
Q 011589 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM--FEVVIFTASQSIYAAQLLD 377 (482)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~--YEIvIfTAs~k~YA~~ILd 377 (482)
..++..|+||.||||+-....+...... -....+..-|.+.+.|+.|++. ..|+|-|.-...-.+.++.
T Consensus 588 ~a~~RLlfLDyDGTLap~~~~P~~~~~~---------~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg 658 (934)
T PLN03064 588 QSNNRLLILGFNATLTEPVDTPGRRGDQ---------IKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFG 658 (934)
T ss_pred hccceEEEEecCceeccCCCCccccccc---------ccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhC
Confidence 4566789999999998653222100000 0011244558899999999964 7899999999888888876
Q ss_pred Hh
Q 011589 378 IL 379 (482)
Q Consensus 378 ~L 379 (482)
.+
T Consensus 659 ~~ 660 (934)
T PLN03064 659 EF 660 (934)
T ss_pred CC
Confidence 55
No 215
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=30.35 E-value=41 Score=37.33 Aligned_cols=23 Identities=30% Similarity=0.382 Sum_probs=19.2
Q ss_pred EEEEEcCCcHHHHHHHHHH-hCCC
Q 011589 360 EVVIFTASQSIYAAQLLDI-LDPD 382 (482)
Q Consensus 360 EIvIfTAs~k~YA~~ILd~-LDP~ 382 (482)
+.+|-||+.+.|++++++. |+-+
T Consensus 124 ~~vvVSASp~~~Vepfa~~~LGid 147 (497)
T PLN02177 124 KRYIITASPRIMVEPFVKTFLGAD 147 (497)
T ss_pred CEEEEECCcHHHHHHHHHHcCCCC
Confidence 4599999999999999975 6554
No 216
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=26.83 E-value=35 Score=31.04 Aligned_cols=13 Identities=38% Similarity=0.682 Sum_probs=11.3
Q ss_pred EEEecCccccccc
Q 011589 306 LVLDLDETLVHST 318 (482)
Q Consensus 306 LVLDLDeTLVhSs 318 (482)
+|+|+||||+...
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 5899999998875
No 217
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=25.78 E-value=1e+02 Score=33.64 Aligned_cols=58 Identities=16% Similarity=0.141 Sum_probs=35.8
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcceEEEEEcCCc
Q 011589 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQ 368 (482)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YEIvIfTAs~ 368 (482)
...+..-||+|||||...... .+......|.+..++.-..+=+.=.+.|-++|||...
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~----------vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~ 130 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGK----------VFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQN 130 (422)
T ss_pred CCcceEEEecCCceeecCCcc----------eeeccCccceeeccccchhhhhhccCCeEEEEEeccc
Confidence 345688999999999875321 1222333455555555555443334679999998654
No 218
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=25.08 E-value=1.3e+02 Score=33.21 Aligned_cols=52 Identities=23% Similarity=0.388 Sum_probs=40.4
Q ss_pred EEEeeCchHHHHHHHhhcce-EEEEEcCCcHHHHHHHHHHh-CC-------CCCeeeeEEE
Q 011589 340 VYVKQRPHLKTFLERVAEMF-EVVIFTASQSIYAAQLLDIL-DP-------DGKLISRRVY 391 (482)
Q Consensus 340 vyV~lRPgL~eFLe~Lsk~Y-EIvIfTAs~k~YA~~ILd~L-DP-------~~klfs~RLy 391 (482)
-||.+-|.+..+|++|.+.- .+.+-|.|...|++.+++.+ ++ ++.||+-++.
T Consensus 180 kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv 240 (448)
T PF05761_consen 180 KYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIV 240 (448)
T ss_dssp CCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEE
T ss_pred HHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEE
Confidence 46778999999999999775 89999999999999999985 44 4578877766
No 219
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=24.99 E-value=36 Score=31.61 Aligned_cols=13 Identities=31% Similarity=0.445 Sum_probs=11.1
Q ss_pred EEEecCccccccc
Q 011589 306 LVLDLDETLVHST 318 (482)
Q Consensus 306 LVLDLDeTLVhSs 318 (482)
.++|+||||+...
T Consensus 2 a~FD~DgTL~~~~ 14 (202)
T TIGR01490 2 AFFDFDGTLTAKD 14 (202)
T ss_pred eEEccCCCCCCCc
Confidence 6899999999853
No 220
>PRK10671 copA copper exporting ATPase; Provisional
Probab=23.69 E-value=66 Score=37.62 Aligned_cols=85 Identities=14% Similarity=0.154 Sum_probs=58.1
Q ss_pred eeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEEC
Q 011589 343 KQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDN 421 (482)
Q Consensus 343 ~lRPgL~eFLe~Lsk-~YEIvIfTAs~k~YA~~ILd~LDP~~klfs~RLyRe~C~~~~g~yiKDLs~LGRdLs~VIIVDD 421 (482)
.+||++.+.|+++.+ .+.+++.|...+..|+.+++.+.-.. +|.... .....+-++.++...++++.|-|
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~-~~~~~~--------p~~K~~~i~~l~~~~~~v~~vGD 720 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE-VIAGVL--------PDGKAEAIKRLQSQGRQVAMVGD 720 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-EEeCCC--------HHHHHHHHHHHhhcCCEEEEEeC
Confidence 569999999999974 59999999999999999999988753 332211 00111223334555678999999
Q ss_pred ChhhhccCCCceeee
Q 011589 422 SPQVFRLQVNNGIPI 436 (482)
Q Consensus 422 sp~~~~~qp~NgIpI 436 (482)
...-...-...++-|
T Consensus 721 g~nD~~al~~Agvgi 735 (834)
T PRK10671 721 GINDAPALAQADVGI 735 (834)
T ss_pred CHHHHHHHHhCCeeE
Confidence 987554433344433
No 221
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=22.77 E-value=1.4e+02 Score=25.65 Aligned_cols=16 Identities=50% Similarity=0.536 Sum_probs=13.8
Q ss_pred ceEEEEecCccccccc
Q 011589 303 SVTLVLDLDETLVHST 318 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (482)
..+|||+=|||.|.+.
T Consensus 39 ~~~lvLeeDGT~Vd~E 54 (81)
T cd06537 39 VLTLVLEEDGTAVDSE 54 (81)
T ss_pred ceEEEEecCCCEEccH
Confidence 3799999999999763
No 222
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=21.25 E-value=1.4e+02 Score=30.10 Aligned_cols=57 Identities=19% Similarity=0.319 Sum_probs=36.6
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhcceEEEEE-cCCcHHHHH----HH
Q 011589 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIF-TASQSIYAA----QL 375 (482)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsk~YEIvIf-TAs~k~YA~----~I 375 (482)
.++.++.+|.||||.-.. -+.-|-+.+||+.+.+...|.+- -+-.....+ .|
T Consensus 9 ~~~~l~lfdvdgtLt~~r-----------------------~~~~~e~~~~l~~lr~~v~ig~VggsDl~k~~eqlG~~V 65 (252)
T KOG3189|consen 9 DEETLCLFDVDGTLTPPR-----------------------QKVTPEMLEFLQKLRKKVTIGFVGGSDLSKQQEQLGDNV 65 (252)
T ss_pred CCceEEEEecCCcccccc-----------------------ccCCHHHHHHHHHHhhheEEEEeecHHHHHHHHHhchhH
Confidence 344566679999995442 23468899999999988777644 333333333 34
Q ss_pred HHHhC
Q 011589 376 LDILD 380 (482)
Q Consensus 376 Ld~LD 380 (482)
++..|
T Consensus 66 l~~fD 70 (252)
T KOG3189|consen 66 LEEFD 70 (252)
T ss_pred Hhhhc
Confidence 55544
No 223
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=21.15 E-value=1.5e+02 Score=25.28 Aligned_cols=16 Identities=50% Similarity=0.594 Sum_probs=13.8
Q ss_pred ceEEEEecCccccccc
Q 011589 303 SVTLVLDLDETLVHST 318 (482)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (482)
..+|||+=|||.|.+.
T Consensus 40 ~~~lvL~eDGT~Vd~E 55 (78)
T cd06539 40 LVTLVLEEDGTVVDTE 55 (78)
T ss_pred CcEEEEeCCCCEEccH
Confidence 4799999999999763
No 224
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=20.99 E-value=55 Score=39.58 Aligned_cols=18 Identities=28% Similarity=0.466 Sum_probs=15.0
Q ss_pred CCceEEEEecCccccccc
Q 011589 301 RKSVTLVLDLDETLVHST 318 (482)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs 318 (482)
.+-+.++|||||||+++.
T Consensus 73 ~~ikaVIFDlDGTLiDS~ 90 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNSE 90 (1057)
T ss_pred CCCCEEEECCCCCeEeCh
Confidence 344589999999999986
Done!