RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 011590
(482 letters)
>d1t9ba2 c.36.1.5 (A:89-263) Acetohydroxyacid synthase catalytic
subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 175
Score = 104 bits (261), Expect = 5e-27
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 1/167 (0%)
Query: 14 IDGNTLAAKSLSLFGATHMFGVVGIPVTSLAN-RAVQLGVRFIAFHNEQSAGYAASAYGY 72
+ G + + +S +FG G + + + F+ +EQ AG+ A Y
Sbjct: 4 LTGGQIFNEMMSRQNVDTVFGYPGGAILPVYDAIHNSDKFNFVLPKHEQGAGHMAEGYAR 63
Query: 73 LTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVK 132
+GKPG++L SGPG + + +++ + P+V+ +G G FQE D V +
Sbjct: 64 ASGKPGVVLVTSGPGATNVVTPMADAFADGIPMVVFTGQVPTSAIGTDAFQEADVVGISR 123
Query: 133 PFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTI 179
+K+ V K + E+P + + E A SGRPG +DLP DV +
Sbjct: 124 SCTKWNVMVKSVEELPLRINEAFEIATSGRPGPVLVDLPKDVTAAIL 170
>d1ybha2 c.36.1.5 (A:86-280) Acetohydroxyacid synthase catalytic
subunit {Thale cress (Arabidopsis thaliana), chloroplast
[TaxId: 3702]}
Length = 195
Score = 104 bits (259), Expect = 1e-26
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Query: 16 GNTLAAKSLSLFGATHMFGVVGIPVTSLAN-RAVQLGVRFIAFHNEQSAGYAASAYGYLT 74
G + ++L G +F G + +R + +EQ +AA Y +
Sbjct: 14 GADILVEALERQGVETVFAYPGGASMEIHQALTRSSSIRNVLPRHEQGGVFAAEGYARSS 73
Query: 75 GKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPF 134
GKPGI + SGPG + ++GL++ ++++ P+V I+G ++ G FQE VE +
Sbjct: 74 GKPGICIATSGPGATNLVSGLADALLDSVPLVAITGQVPRRMIGTDAFQETPIVEVTRSI 133
Query: 135 SKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTI 179
+K D+ ++P+ + + A SGRPG +D+P D+ Q
Sbjct: 134 TKHNYLVMDVEDIPRIIEEAFFLATSGRPGPVLVDVPKDIQQQLA 178
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter
formigenes [TaxId: 847]}
Length = 175
Score = 97.0 bits (240), Expect = 3e-24
Identities = 65/172 (37%), Positives = 97/172 (56%), Gaps = 5/172 (2%)
Query: 206 SDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHPL 265
I +A L+K AK+P+I+ GKGAAYA+ + E++ LVE TGIPFLP M KGLLPD HP
Sbjct: 7 DAIARAADLIKNAKRPVIMLGKGAAYAQCDDEIRALVEETGIPFLPMGMAKGLLPDNHPQ 66
Query: 266 AATAARSLAIGQCDVALVVGARLNWLLHFGEPPKWSKDVKFVLVDVCKEEIELR--KPHL 323
+A A R+ A+ QCDV +++GARLNWL+ G+ W ++K + +
Sbjct: 67 SAAATRAFALAQCDVCVLIGARLNWLMQHGKGKTWGDELKKYVQIDIQANEMDSNQPIAA 126
Query: 324 GLVGDAKKVLEMINKEIKDEPFCLGKNHPWVEAIWKKTKDNVLKMEVQLAKD 375
+VGD K + ++ K +K P + W A+ K N K+ ++ +
Sbjct: 127 PVVGDIKSAVSLLRKALKGAPK---ADAEWTGALKAKVDGNKAKLAGKMTAE 175
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase
{Pseudomonas putida [TaxId: 303]}
Length = 160
Score = 88.0 bits (217), Expect = 4e-21
Identities = 30/145 (20%), Positives = 45/145 (31%), Gaps = 7/145 (4%)
Query: 205 NSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHP 264
+ D+D V L A P IV G A A + L E P P T
Sbjct: 6 DQDLDILVKALNSASNPAIVLGPDVDAANANADCVMLAERLKAPVWVAPSAPRCPFPTRH 65
Query: 265 -------LAATAARSLAIGQCDVALVVGARLNWLLHFGEPPKWSKDVKFVLVDVCKEEIE 317
A AA S + DV LV+GA + + + + V E
Sbjct: 66 PCFRGLMPAGIAAISQLLEGHDVVLVIGAPVFRYHQYDPGQYLKPGTRLISVTCDPLEAA 125
Query: 318 LRKPHLGLVGDAKKVLEMINKEIKD 342
+V D + + +++
Sbjct: 126 RAPMGDAIVADIGAMASALANLVEE 150
>d2ji7a2 c.36.1.5 (A:7-194) Oxalyl-CoA decarboxylase {Oxalobacter
formigenes [TaxId: 847]}
Length = 188
Score = 85.5 bits (210), Expect = 5e-20
Identities = 76/177 (42%), Positives = 112/177 (63%), Gaps = 2/177 (1%)
Query: 14 IDGNTLAAKSLSLFGATHMFGVVGIPVTSLANRAVQLGVRFIAFHNEQSAGYAASAYGYL 73
DG + +L + M+GVVGIP+T+LA G RF +F +EQ AGYAAS GY+
Sbjct: 4 TDGFHVLIDALKMNDIDTMYGVVGIPITNLARMWQDDGQRFYSFRHEQHAGYAASIAGYI 63
Query: 74 TGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISG--SCDQKDFGRGDFQELDQVEAV 131
GKPG+ LTVS PG ++G+ L++ N +P++++SG + D +GD++E+DQ+
Sbjct: 64 EGKPGVCLTVSAPGFLNGVTSLAHATTNCFPMILLSGSSEREIVDLQQGDYEEMDQMNVA 123
Query: 132 KPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVSEAEKLL 188
+P K + + I ++P +A+ + AVSGRPGG Y+DLP + QTISV EA KLL
Sbjct: 124 RPHCKASFRINSIKDIPIGIARAVRTAVSGRPGGVYVDLPAKLFGQTISVEEANKLL 180
>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase
{Enterobacter cloacae [TaxId: 550]}
Length = 161
Score = 84.0 bits (207), Expect = 8e-20
Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 10/159 (6%)
Query: 191 AESAKETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFL 250
A + K+ + + D A + L +K+ ++ + L+K V+ +
Sbjct: 2 ALTHKQAHADSACLKAFRDAAENKLAMSKRTALLADFLVLRHGLKHALQKWVKEVPMAHA 61
Query: 251 PTPMGKGLLPDTHP--------LAATAARSLAIGQCDVALVVGARLNWLLHFGEPPKWSK 302
MGKG+ + A+T A AI D L VG R L
Sbjct: 62 TMLMGKGIFDERQAGFYGTYSGSASTGAVKEAIEGADTVLCVGTRFTDTLTA-GFTHQLT 120
Query: 303 DVKFVLVDVCKEEI-ELRKPHLGLVGDAKKVLEMINKEI 340
+ + V + ++ + + + ++E+ + +
Sbjct: 121 PAQTIEVQPHAARVGDVWFTGIPMNQAIETLVELCKQHV 159
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase
{Streptomyces clavuligerus [TaxId: 1901]}
Length = 177
Score = 83.1 bits (204), Expect = 2e-19
Identities = 38/175 (21%), Positives = 59/175 (33%), Gaps = 17/175 (9%)
Query: 198 VTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKG 257
V G D+A +LL EAK P++V G A + A ++ L E IP + T + KG
Sbjct: 1 VADGW--QKAADQAAALLAEAKHPVLVVGAAAIRSGAVPAIRALAERLNIPVITTYIAKG 58
Query: 258 LLPDTHPLAA------------TAARSLAIGQCDVALVVGARLNWLLHFGEPPKWSKDVK 305
+LP H L A D+ L VG L K +
Sbjct: 59 VLPVGHELNYGAVTGYMDGILNFPALQTMFAPVDLVLTVGYDYAEDLRPSMWQKGIEKKT 118
Query: 306 FVLVDVCKEEIELRKPHLGLVGDAKKVLEMINKEIKDEPFCLGKNHPWVEAIWKK 360
+ + +P + +V D +E K +E + +
Sbjct: 119 VRISPTVNPIPRVYRPDVDVVTDVLAFVEHFETATASFGA---KQRHDIEPLRAR 170
>d1ozha2 c.36.1.5 (A:7-187) Catabolic acetolactate synthase
{Klebsiella pneumoniae [TaxId: 573]}
Length = 181
Score = 83.1 bits (204), Expect = 3e-19
Identities = 46/169 (27%), Positives = 80/169 (47%)
Query: 14 IDGNTLAAKSLSLFGATHMFGVVGIPVTSLANRAVQLGVRFIAFHNEQSAGYAASAYGYL 73
G L L G +FG+ G + + + + +R I +E +A + A+A G +
Sbjct: 5 AHGADLVVSQLEAQGVRQVFGIPGAKIDKVFDSLLDSSIRIIPVRHEANAAFMAAAVGRI 64
Query: 74 TGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKP 133
TGK G+ L SGPGC + + G++ P+V + G+ + D + Q +D V P
Sbjct: 65 TGKAGVALVTSGPGCSNLITGMATANSEGDPVVALGGAVKRADKAKQVHQSMDTVAMFSP 124
Query: 134 FSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVS 182
+K+A++ + + V+ A GRPG ++ LP DV+ +S
Sbjct: 125 VTKYAIEVTAPDALAEVVSNAFRAAEQGRPGSAFVSLPQDVVDGPVSGK 173
>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase
{Klebsiella pneumoniae [TaxId: 573]}
Length = 179
Score = 82.7 bits (203), Expect = 4e-19
Identities = 33/168 (19%), Positives = 57/168 (33%), Gaps = 16/168 (9%)
Query: 201 GGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLP 260
G + ID+ L+ +AK P+ + G A+ L++L+E++ IP T G +
Sbjct: 3 GAAPDDAIDQVAKLIAQAKNPIFLLGLMASQPENSKALRRLLETSHIPVTSTYQAAGAVN 62
Query: 261 DTHP--------LAATAARSLAIGQCDVALVVGARLNWLLHFGEPPKWSKDVKFVLVDVC 312
+ L A + D+ + +G + V +DV
Sbjct: 63 QDNFSRFAGRVGLFNNQAGDRLLQLADLVICIGYSPVEYEPAMWNSGNA---TLVHIDVL 119
Query: 313 KEEIE-LRKPHLGLVGDAKKVLEMINKEIKDEPFCLGKNHPWVEAIWK 359
E P + LVGD L + + I P I +
Sbjct: 120 PAYEERNYTPDVELVGDIAGTLNKLAQNIDHRL----VLSPQAAEILR 163
>d1ytla1 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synthase
complex epsilon subunit 2, ACDE2 {Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 158
Score = 81.6 bits (201), Expect = 6e-19
Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 22/156 (14%)
Query: 204 VNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTP------MGKG 257
+ +++K+AK+PL++ G E K I + T + G
Sbjct: 5 LLEKGKPVANMIKKAKRPLLIVGPDMTDEMF--ERVKKFVEKDITVVATGSAITRFIDAG 62
Query: 258 LLPDTHPLA-------ATAARSLAI---GQCDVALVVGARLNWL-LHFGEPPKWSKDVKF 306
L + G D+ L++G+ ++ ++
Sbjct: 63 LGEKVNYAVLHELTQFLLDPDWKGFDGQGNYDLVLMLGSIYYHGSQMLAAIKNFAPHIRA 122
Query: 307 VLVDVCKEEIELRKPHLG-LVGDAKKVLEMINKEIK 341
+ +D + G L + L+++++ +
Sbjct: 123 LAID--RYYHPNADMSFGNLWKKEEDYLKLLDEILA 156
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas
mobilis [TaxId: 542]}
Length = 175
Score = 75.7 bits (185), Expect = 1e-16
Identities = 22/174 (12%), Positives = 49/174 (28%), Gaps = 19/174 (10%)
Query: 204 VNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTH 263
+N+ +D+ + + K ++ G A AE K ++ G K P+ +
Sbjct: 8 LNAAVDETLKFIANRDKVAVLVGSKLRAAGAEEAAVKFTDALGGAVATMAAAKSFFPEEN 67
Query: 264 PL--------AATAARSLAIGQCDVALVVGARLNWLLHFGEPPKWSKDVKFVLVDVCKEE 315
L + + + D + + N K VL +
Sbjct: 68 ALYIGTSWGEVSYPGVEKTMKEADAVIALAPVFND-YSTTGWTDIPDPKKLVLAEP--RS 124
Query: 316 IELRKPHLGLVGDAKKVLEMINKEIKDEPFCLGKNHPWVEAIWKKTKDNVLKME 369
+ + V K L + +++ K ++ + K
Sbjct: 125 VVVNGIRFPSV-HLKDYLTRLAQKVS-------KKTGSLDFFKSLNAGELKKAA 170
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic
subunit {Thale cress (Arabidopsis thaliana), chloroplast
[TaxId: 3702]}
Length = 179
Score = 73.9 bits (180), Expect = 5e-16
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 14/167 (8%)
Query: 205 NSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHP 264
+S +++ V L+ E+KKP++ G G + EL + VE TGIP T MG G P
Sbjct: 6 DSHLEQIVRLISESKKPVLYVGGGCLNSSD--ELGRFVELTGIPVASTLMGLGSYPCDDE 63
Query: 265 L-------AATAARSLAIGQCDVALVVGARLNWLLHFGEPPKWSKDVKFVLVDVCKEEIE 317
L T + A+ D+ L G R + G+ ++ K V +D+ EI
Sbjct: 64 LSLHMLGMHGTVYANYAVEHSDLLLAFGVRFDD-RVTGKLEAFASRAKIVHIDIDSAEIG 122
Query: 318 LR-KPHLGLVGDAKKVLEMINKEIKDEPFCLGKNH-PWVEAI--WKK 360
PH+ + GD K L+ +NK +++ L + W + K+
Sbjct: 123 KNKTPHVSVCGDVKLALQGMNKVLENRAEELKLDFGVWRNELNVQKQ 169
>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 179
Score = 73.0 bits (178), Expect = 9e-16
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 10/147 (6%)
Query: 205 NSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHP 264
ID ++L+K+AK P+I+ + + E KKL++ T P TPMGKG + + HP
Sbjct: 17 KEVIDTILALVKDAKNPVILADACCSRHDVKAETKKLIDLTQFPAFVTPMGKGSISEQHP 76
Query: 265 L--------AATAARSLAIGQCDVALVVGARLNWLLHFGEPPKWSKDVKFVLVDVCKEEI 316
+ A+ D+ L VGA L+ + G K V +I
Sbjct: 77 RYGGVYVGTLSKPEVKEAVESADLILSVGALLSD-FNTGSFSYSYKTKNIVEFHSDHMKI 135
Query: 317 -ELRKPHLGLVGDAKKVLEMINKEIKD 342
P + + +K+L I K
Sbjct: 136 RNATFPGVQMKFVLQKLLTNIADAAKG 162
>d2ez9a2 c.36.1.5 (A:9-182) Pyruvate oxidase {Lactobacillus
plantarum [TaxId: 1590]}
Length = 174
Score = 71.5 bits (174), Expect = 3e-15
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 3/173 (1%)
Query: 13 QIDGNTLAAKSLSLFGATHMFGVVGIPVTSL--ANRAVQLGVRFIAFHNEQSAGYAASAY 70
I K L +G H++G+ G + S+ A A + + +I +E+ AA+A
Sbjct: 2 NILAGAAVIKVLEAWGVDHLYGIPGGSINSIMDALSAERDRIHYIQVRHEEVGAMAAAAD 61
Query: 71 GYLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEA 130
LTGK G+ +GPG H + GL + + P++ + G FQE+++
Sbjct: 62 AKLTGKIGVCFGSAGPGGTHLMNGLYDAREDHVPVLALIGQFGTTGMNMDTFQEMNENPI 121
Query: 131 VKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVSE 183
+ + V A + +P + + + RA G + +P D+ Q I +
Sbjct: 122 YADVADYNVTAVNAATLPHVIDEAIRRA-YAHQGVAVVQIPVDLPWQQIPAED 173
>d1q6za2 c.36.1.5 (A:2-181) Benzoylformate decarboxylase
{Pseudomonas putida [TaxId: 303]}
Length = 180
Score = 69.6 bits (169), Expect = 2e-14
Identities = 33/174 (18%), Positives = 58/174 (33%), Gaps = 2/174 (1%)
Query: 21 AKSLSLFGATHMFGVVGIPVTSLANRAVQLGVRFIAFHNEQSAGYAASAYGYLTGKPGIL 80
+ L G +FG G R+I E A Y + KP +
Sbjct: 8 YELLRRQGIDTVFGNPGSNALPFLK-DFPEDFRYILALQEACVVGIADGYAQASRKPAFI 66
Query: 81 LTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQ-ELDQVEAVKPFSKFAV 139
S G + + LSN + P+++ +G + G +D +P K++
Sbjct: 67 NLHSAAGTGNAMGALSNAWNSHSPLIVTAGQQTRAMIGVEALLTNVDAANLPRPLVKWSY 126
Query: 140 KAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVSEAEKLLKEAES 193
+ EVP +++ + A G YL +P D + + S
Sbjct: 127 EPASAAEVPHAMSRAIHMASMAPQGPVYLSVPYDDWDKDADPQSHHLFDRHVSS 180
>d2ihta2 c.36.1.5 (A:12-197) Carboxyethylarginine synthase
{Streptomyces clavuligerus [TaxId: 1901]}
Length = 186
Score = 68.5 bits (166), Expect = 4e-14
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 2/162 (1%)
Query: 21 AKSLSLFGATHMFGVVGIPVTSLANRAVQLGVRFIAFHNEQSAGYAASAYGYLTGKPGIL 80
L G +FGVVG S+ V+ G+ F+ +E +AG AA +TG+P
Sbjct: 8 LSRLRDHGVGKVFGVVGREAASILFDEVE-GIDFVLTRHEFTAGVAADVLARITGRPQAC 66
Query: 81 LTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEA-VKPFSKFAV 139
GPG + G++ +++ P++ ++ + D D + A V P SK+AV
Sbjct: 67 WATLGPGMTNLSTGIATSVLDRSPVIALAAQSESHDIFPNDTHQCLDSVAIVAPMSKYAV 126
Query: 140 KAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISV 181
+ + E+ V + A++ G ++ LP D+L + +
Sbjct: 127 ELQRPHEITDLVDSAVNAAMTEPVGPSFISLPVDLLGSSEGI 168
>d1pvda2 c.36.1.5 (A:2-181) Pyruvate decarboxylase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 67.6 bits (164), Expect = 8e-14
Identities = 27/185 (14%), Positives = 56/185 (30%), Gaps = 13/185 (7%)
Query: 12 AQIDGNTLAAKSLSLFGATHMFGVVGIPVTSLANRAVQLGVRFIAFHNEQSAGYAASAYG 71
++I + L +FG+ G SL ++ ++ A + + A+
Sbjct: 1 SEITLGKYLFERLKQVNVNTVFGLPGDFNLSLLDKIYEVEGMRWAGNANELNAAYAADGY 60
Query: 72 YLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFG--------RGDFQ 123
++T G G + L G++ ++ + G G+
Sbjct: 61 ARIKGMSCIITTFGVGELSALNGIAGSYAEHVGVLHVVGVPSISSQAKQLLLHHTLGNGD 120
Query: 124 ELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVSE 183
S+ DI P + + + YL LP +++ +
Sbjct: 121 FTVFHRMSANISETTAMITDIATAPAEIDRCIRTT-YVTQRPVYLGLPANLVDLNVP--- 176
Query: 184 AEKLL 188
KLL
Sbjct: 177 -AKLL 180
>d1t9ba1 c.31.1.3 (A:290-460) Acetohydroxyacid synthase catalytic
subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 171
Score = 67.0 bits (162), Expect = 1e-13
Identities = 32/171 (18%), Positives = 56/171 (32%), Gaps = 23/171 (13%)
Query: 209 DKAVSLLKEAKKPLIVFGKGA-AYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHPLAA 267
+KA L+ AKKP++ G G +A LK+L + IP T G G P +
Sbjct: 1 NKAADLINLAKKPVLYVGAGILNHADGPRLLKELSDRAQIPVTTTLQGLGSFDQEDPKSL 60
Query: 268 TAARSLAIGQCDVALVVGARLNWLLHFG---------------EPPKWSKDVKFVLVDVC 312
++A+ + + + +V
Sbjct: 61 DMLGMHGCATANLAVQNADLIIAVGARFDDRVTGNISKFAPEARRAAAEGRGGIIHFEVS 120
Query: 313 KEEI-ELRKPHLGLVGDAKKVLEMINKEIKDEPFCLGKNHPWVEAI--WKK 360
+ I ++ + + + GDA L + +I + W I WKK
Sbjct: 121 PKNINKVVQTQIAVEGDATTNLGKMMSKIFPVK----ERSEWFAQINKWKK 167
>d2djia2 c.36.1.5 (A:3-186) Pyruvate oxidase {Aerococcus viridans
[TaxId: 1377]}
Length = 184
Score = 65.0 bits (157), Expect = 7e-13
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 11 NAQIDGNTLAAKSLSLFGATHMFGVVGIPVTSL--ANRAVQLGVRFIAFHNEQSAGYAAS 68
+ +I+ K L +GA ++G+ ++SL A + V+F+ +E+ AA
Sbjct: 1 DNKINIGLAVMKILESWGADTIYGIPSGTLSSLMDAMGEEENNVKFLQVKHEEVGAMAAV 60
Query: 69 AYGYLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQV 128
G G+ + GPG H + GL + ++ P+V I GS Q++ FQEL+Q
Sbjct: 61 MQSKFGGNLGVTVGSGGPGASHLINGLYDAAMDNIPVVAILGSRPQRELNMDAFQELNQN 120
Query: 129 EAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVSE 183
+ + + ++PK V + A++ R G L++P D I +
Sbjct: 121 PMYDHIAVYNRRVAYAEQLPKLVDEAARMAIAKR-GVAVLEVPGDFAKVEIDNDQ 174
>d1ovma2 c.36.1.5 (A:3-180) Indole-3-pyruvate decarboxylase
{Enterobacter cloacae [TaxId: 550]}
Length = 178
Score = 63.8 bits (154), Expect = 1e-12
Identities = 36/169 (21%), Positives = 60/169 (35%), Gaps = 12/169 (7%)
Query: 21 AKSLSLFGATHMFGVVGIPVTSLANRAV-QLGVRFIAFHNEQSAGYAASAYGYLTGKPGI 79
L+ GA H+FGV G + + + ++ NE +A YAA Y G +
Sbjct: 10 LDRLTDCGADHLFGVPGDYNLQFLDHVIDSPDICWVGCANELNASYAADGYARCKGFAAL 69
Query: 80 LLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQE--------LDQVEAV 131
L T G G + + G++ P++ I G+ RG+
Sbjct: 70 L-TTFGVGELSAMNGIAGSYAEHVPVLHIVGAPGTAAQQRGELLHHTLGDGEFRHFYHMS 128
Query: 132 KPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTIS 180
+P + + + + RPG YL LP DV + +
Sbjct: 129 EPITVAQAVLTEQNACYEIDRVLTTMLRERRPG--YLMLPADVAKKAAT 175
>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus
plantarum [TaxId: 1590]}
Length = 183
Score = 63.5 bits (153), Expect = 2e-12
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 16/165 (9%)
Query: 206 SDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHP- 264
+ + L A++PLI +G GA +A EL++L ++ IP + T KG++ D +P
Sbjct: 18 QAVTRLTQTLLAAERPLIYYGIGA--RKAGKELEQLSKTLKIPLMSTYPAKGIVADRYPA 75
Query: 265 ------LAATAARSLAIGQCDVALVVGARLNWLLHFGEPPKWSKDVKFVLVDVCKEEIEL 318
A + A+ Q DV L VG + + + + +
Sbjct: 76 YLGSANRVAQKPANEALAQADVVLFVGNNYPF--AEVSKAFKNTRYFLQIDIDPAKLGKR 133
Query: 319 RKPHLGLVGDAKKVLEMINKEIKDEPFCLGKNHPWVEAIWKKTKD 363
K + ++ DA+K L I ++ + ++ PW +A K+
Sbjct: 134 HKTDIAVLADAQKTLAAILAQVSER-----ESTPWWQANLANVKN 173
>d1zpda2 c.36.1.5 (A:2-187) Pyruvate decarboxylase {Zymomonas
mobilis [TaxId: 542]}
Length = 186
Score = 62.5 bits (151), Expect = 4e-12
Identities = 31/170 (18%), Positives = 59/170 (34%), Gaps = 11/170 (6%)
Query: 21 AKSLSLFGATHMFGVVGIPVTSLANRAVQLG-VRFIAFHNEQSAGYAASAYGYLTGKPGI 79
A+ L G H F V G L + + + + NE + G++A Y G
Sbjct: 9 AERLVQIGLKHHFAVAGDYNLVLLDNLLLNKNMEQVYCCNELNCGFSAEGYARAKGAAAA 68
Query: 80 LLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQE--------LDQVEAV 131
+ G + + P+++ISG+ + D G Q+E
Sbjct: 69 V-VTYSVGALSAFDAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTDYHYQLEMA 127
Query: 132 KPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISV 181
K + A E P + V++ A+ + YL++ ++ +
Sbjct: 128 KNITAAAEAIYTPEEAPAKIDHVIKTALREK-KPVYLEIACNIASMPCAA 176
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans
[TaxId: 1377]}
Length = 177
Score = 61.2 bits (147), Expect = 1e-11
Identities = 31/163 (19%), Positives = 54/163 (33%), Gaps = 12/163 (7%)
Query: 206 SDIDKAVSLLKEAKKPLIVFGKGAAYARAE-----GELKKLVESTGIPFLPTPMGKGLLP 260
DID AV LL +K+P+I G G ++K V +TG F L
Sbjct: 9 QDIDAAVELLNNSKRPVIYAGIGTMGHGPAVQELARKIKAPVITTGKNFETFEWDFEALT 68
Query: 261 DTHPLAATAARSLAIGQCDVALVVGARLNWLLHFGEPPKWSKDVKFVLVDVCKEEIELRK 320
+ + I + D L G+ + E + D + +
Sbjct: 69 GSTYRVGWKPANETILEADTVLFAGSNFPF--SEVEGTFRNVDNFIQIDIDPAMLGKRHH 126
Query: 321 PHLGLVGDAKKVLEMINKEIKDEPFCLGKNHPWVEAIWKKTKD 363
+ ++GDA ++ I ++ + W A K +
Sbjct: 127 ADVAILGDAALAIDEILNKVDAV-----EESAWWTANLKNIAN 164
>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter
formigenes [TaxId: 847]}
Length = 183
Score = 61.1 bits (147), Expect = 1e-11
Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
Query: 378 PFNFMTPMRIIRDAILGVGSPAPILVSEGANTMDVGRAVLVQTEPRCRLDAGTWGTMGVG 437
N+ + ++RD +L +P LV+EGAN +D R ++ +PR RLD+GTWG MG+G
Sbjct: 5 MMNYSNSLGVVRDFMLA--NPDISLVNEGANALDNTRMIVDMLKPRKRLDSGTWGVMGIG 62
Query: 438 LGYCIAAAIACPERLVVAVEGDSGFGFSAVEVEVW 472
+GYC+ AA A + V+AVEGDS FGFS +E+E
Sbjct: 63 MGYCV-AAAAVTGKPVIAVEGDSAFGFSGMELETI 96
>d1zpda3 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymomonas
mobilis [TaxId: 542]}
Length = 204
Score = 44.8 bits (105), Expect = 6e-06
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 2/91 (2%)
Query: 382 MTPMRIIRDAILGVGSPAPILVSEGANTMDVGRAVLVQTEPRCRLDAGTWGTMGVGLGYC 441
+ I R + + +P +++E ++ + WG +G +
Sbjct: 3 LVNAEIAR-QVEALLTPNTTVIAETGDSW-FNAQRMKLPNGARVEYEMQWGHIGWSVPAA 60
Query: 442 IAAAIACPERLVVAVEGDSGFGFSAVEVEVW 472
A+ PER + + GD F +A EV
Sbjct: 61 FGYAVGAPERRNILMVGDGSFQLTAQEVAQM 91
>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase
{Enterobacter cloacae [TaxId: 550]}
Length = 196
Score = 38.4 bits (88), Expect = 7e-04
Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 2/105 (1%)
Query: 378 PFNFMTPMRIIRDAILGVGSPAPILVSEGANTMDVGRAVLVQTEPRCRLDAGTWGTMGVG 437
P +T R + P I++++ + G L + WG++G
Sbjct: 1 PDGSLTQENFWR-TLQTFIRPGDIILADQGTSA-FGAIDLRLPADVNFIVQPLWGSIGYT 58
Query: 438 LGYCIAAAIACPERLVVAVEGDSGFGFSAVEVEVWLSCIIMISSI 482
L A ACP R V+ + GD + E+ L +
Sbjct: 59 LAAAFGAQTACPNRRVIVLTGDGAAQLTIQELGSMLRDKQHPIIL 103
>d1pnoa_ c.31.1.4 (A:) Transhydrogenase domain III (dIII)
{Rhodospirillum rubrum [TaxId: 1085]}
Length = 180
Score = 32.8 bits (75), Expect = 0.042
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 200 QGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVE 243
+G + + A ++K A K +IV G G A A+A+ L+++ +
Sbjct: 5 EGRHMAGSAEDAAFIMKNASKVIIVPGYGMAVAQAQHALREMAD 48
>d1d4oa_ c.31.1.4 (A:) Transhydrogenase domain III (dIII) {Cow (Bos
taurus) [TaxId: 9913]}
Length = 177
Score = 31.6 bits (72), Expect = 0.11
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 201 GGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVE 243
G ++D A+ +++EA +I G G A+A+ + LV+
Sbjct: 1 GTHTEINLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVK 43
Score = 27.0 bits (60), Expect = 3.3
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 325 LVGDAKKVLEMINKEIKD 342
L+GDAKK + + ++++
Sbjct: 159 LLGDAKKTCDALQAKVRE 176
>d2ihta3 c.36.1.9 (A:375-572) Carboxyethylarginine synthase
{Streptomyces clavuligerus [TaxId: 1901]}
Length = 198
Score = 31.1 bits (69), Expect = 0.18
Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 382 MTPMRIIR--DAILGVGSPAP--ILVSEGANTMDVGRAVLVQTEPRCRLDAGTWGTMGVG 437
M ++I + ++ + +VS+ G +P L + + G G
Sbjct: 8 MRVHQVIDSMNTVMEEAAEPGEGTIVSDIGFFRHYGVLFARADQPFGFLTSAGCSSFGYG 67
Query: 438 LGYCIAAAIACPERLVVAVEGDSGFGFSAVEVEVW 472
+ I A +A P++ + GD GF ++ ++E
Sbjct: 68 IPAAIGAQMARPDQPTFLIAGDGGFHSNSSDLETI 102
>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 289
Score = 29.5 bits (65), Expect = 0.84
Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 3/95 (3%)
Query: 249 FLPTPMGKGLLPDTHPLAATAARSLAIGQCDVALVVGARLNWLLHFGEPPKWSKDVKFVL 308
LP + L D+ L S Q + +VVG L P + + VK VL
Sbjct: 183 DLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEIPRKVKRVL 242
Query: 309 VD---VCKEEIELRKPHLGLVGDAKKVLEMINKEI 340
+ V + R L + + + E + +E+
Sbjct: 243 CNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEEL 277
>d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans
[TaxId: 1377]}
Length = 229
Score = 29.2 bits (64), Expect = 1.0
Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 1/94 (1%)
Query: 382 MTPMRIIRDAILGVGSPAPILVSEGANTMDVGRAVLVQTEPRCRLDAGTWGTMGVGLGYC 441
+ ++ +AI I + N+ L T + + TMG+ +
Sbjct: 3 LQFYQVY-NAINNHADEDAIYSIDVGNSTQTSIRHLHMTPKNMWRTSPLFATMGIAIPGG 61
Query: 442 IAAAIACPERLVVAVEGDSGFGFSAVEVEVWLSC 475
+ A P+R V + GD F + +V +
Sbjct: 62 LGAKNTYPDRQVWNIIGDGAFSMTYPDVVTNVRY 95
>d1zeea1 a.266.1.2 (A:6-392) Hypothetical protein SO4414 {Shewanella
oneidensis [TaxId: 70863]}
Length = 387
Score = 29.4 bits (66), Expect = 1.1
Identities = 11/48 (22%), Positives = 15/48 (31%)
Query: 40 VTSLANRAVQLGVRFIAFHNEQSAGYAASAYGYLTGKPGILLTVSGPG 87
+ G I HNE Y A + + +T SGP
Sbjct: 302 LKLFIEVCELHGQTAIQHHNELVTKYIAEPSVSMEQQHLAKVTASGPP 349
>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative
beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor
[TaxId: 1902]}
Length = 216
Score = 28.5 bits (62), Expect = 1.6
Identities = 6/20 (30%), Positives = 8/20 (40%)
Query: 269 AARSLAIGQCDVALVVGARL 288
A R++ G DV A
Sbjct: 177 AVRAIEEGSADVMFAGAADT 196
>d1jeoa_ c.80.1.3 (A:) Probable 3-hexulose-6-phosphate isomerase
MJ1247 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 177
Score = 27.4 bits (60), Expect = 2.4
Identities = 7/32 (21%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 204 VNSDIDKAVSLLKEAKKPLIVFGKGAAYARAE 235
+ +D + + +AKK + +FG G +
Sbjct: 23 WKNKLDSLIDRIIKAKK-IFIFGVGRSGYIGR 53
>d1efva2 c.31.1.2 (A:208-331) C-terminal domain of the electron
transfer flavoprotein alpha subunit {Human (Homo
sapiens) [TaxId: 9606]}
Length = 124
Score = 25.9 bits (57), Expect = 7.1
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 322 HLGLVGDAKKVLEMINKEIK 341
G+V D KV+ + + +K
Sbjct: 105 DYGIVADLFKVVPEMTEILK 124
>d1q1la_ d.258.1.1 (A:) Chorismate synthase, AroC {Aquifex aeolicus
[TaxId: 63363]}
Length = 397
Score = 26.5 bits (58), Expect = 8.9
Identities = 10/49 (20%), Positives = 21/49 (42%)
Query: 89 VHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKF 137
L+G+ G PI + + D +++ E + +V PF++
Sbjct: 60 AEILSGVRFGKTLGSPIALFIRNRDWENWKEKMAIEGEPSPSVVPFTRP 108
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.136 0.406
Gapped
Lambda K H
0.267 0.0469 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,761,283
Number of extensions: 83655
Number of successful extensions: 343
Number of sequences better than 10.0: 1
Number of HSP's gapped: 332
Number of HSP's successfully gapped: 42
Length of query: 482
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 393
Effective length of database: 1,185,626
Effective search space: 465951018
Effective search space used: 465951018
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.6 bits)