Your job contains 1 sequence.
>011591
MQIKTLIHPLQGCSPSLIILNKTPALARFQSSFSPPSLRFFTTNILHRGVKTSCISPGKE
LIFDENSDNSISLSKNEEEKEEEEEEIEMEVKRGGLEKQSIWSQMKEIVMFTGPATGLWL
CGPLMSLIDTAVIGQGSSVELAALGPGTVMCDYLTYVFMFLSIATSNMVATSLARQDKNE
VQHQISVLLFVGLACGFLMLLFTRFFGSWALTAFTGPRNVHLVPAANTYVQIRSFAWPAV
LVGLVAQSASLGMKDSLGPLKALAVASAINGIGDVALCSFLGYGIAGAAWATMVSQVVSA
YMMIQSLNNKGYNAFSFSVPSTNELATILGLAGPVFITMISKVAFYSLIIYFATSMGTNT
VAAHQVMIQTYGMCSVWGEPLSQTAQSFMPELIYGVNRSLVKARMLLKSLLLIGSTLGLV
LGTIGASVPWFFPNIFTSDKSVIQEMHKVLIPYILAIVVSPSTHSLEGTLLVCLMPVFQT
RN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011591
(482 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2050140 - symbol:AT2G21340 species:3702 "Arabi... 1489 1.2e-152 1
TAIR|locus:2120267 - symbol:EDS5 "AT4G39030" species:3702... 1346 1.7e-137 1
TAIR|locus:2057135 - symbol:AT2G38330 "AT2G38330" species... 247 3.1e-18 1
TAIR|locus:2077477 - symbol:FRD3 "FERRIC REDUCTASE DEFECT... 165 3.7e-13 2
UNIPROTKB|Q8E8P4 - symbol:dinF "DNA damage-inducible mult... 198 7.7e-13 1
TIGR_CMR|SO_4617 - symbol:SO_4617 "DNA-damage-inducible p... 198 7.7e-13 1
TAIR|locus:2008236 - symbol:AT1G51340 species:3702 "Arabi... 140 5.2e-11 2
UNIPROTKB|Q9KVQ1 - symbol:VC_0090 "DNA-damage-inducible p... 179 1.0e-10 1
TIGR_CMR|VC_0090 - symbol:VC_0090 "DNA-damage-inducible p... 179 1.0e-10 1
UNIPROTKB|P28303 - symbol:dinF "DinF MATE Transporter" sp... 179 1.1e-10 1
UNIPROTKB|Q5LPD9 - symbol:dinF "DNA-damage-inducible prot... 163 5.9e-09 1
TIGR_CMR|SPO_2909 - symbol:SPO_2909 "DNA-damage-inducible... 163 5.9e-09 1
UNIPROTKB|Q0BYJ3 - symbol:HNE_2771 "Putative DNA-damage-i... 155 4.5e-08 1
TIGR_CMR|GSU_3129 - symbol:GSU_3129 "MATE efflux family p... 147 3.7e-07 1
UNIPROTKB|Q48DJ8 - symbol:dinF "DNA-damage-inducible prot... 138 3.5e-06 1
TIGR_CMR|BA_1402 - symbol:BA_1402 "MATE efflux family pro... 135 7.8e-06 1
UNIPROTKB|P76352 - symbol:yeeO "YeeO MATE transporter" sp... 135 9.0e-06 1
TIGR_CMR|CHY_1592 - symbol:CHY_1592 "MATE efflux family p... 129 3.4e-05 1
TIGR_CMR|CPS_2915 - symbol:CPS_2915 "multidrug resistance... 127 6.3e-05 1
UNIPROTKB|Q9KKW1 - symbol:VC_A0989 "Putative uncharacteri... 116 0.00094 1
TIGR_CMR|VC_A0989 - symbol:VC_A0989 "conserved hypothetic... 116 0.00094 1
>TAIR|locus:2050140 [details] [associations]
symbol:AT2G21340 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
transmembrane transport" evidence=IEA] [GO:0015238 "drug
transmembrane transporter activity" evidence=IEA] [GO:0015297
"antiporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006841
GO:GO:0009941 GO:GO:0031969 GO:GO:0015238 GO:GO:0015297
eggNOG:COG0534 TIGRFAMs:TIGR00797 HOGENOM:HOG000029977
EMBL:AY062577 EMBL:AY128797 EMBL:AY086052 IPI:IPI00522746
PIR:B84600 RefSeq:NP_565509.4 UniGene:At.27297
ProteinModelPortal:Q8W4G3 PaxDb:Q8W4G3 PRIDE:Q8W4G3
EnsemblPlants:AT2G21340.1 GeneID:816673 KEGG:ath:AT2G21340
GeneFarm:3161 TAIR:At2g21340 InParanoid:Q9SJU3 OMA:WAMGFLR
PhylomeDB:Q8W4G3 ProtClustDB:CLSN2927366 Genevestigator:Q8W4G3
Uniprot:Q8W4G3
Length = 559
Score = 1489 (529.2 bits), Expect = 1.2e-152, P = 1.2e-152
Identities = 306/485 (63%), Positives = 359/485 (74%)
Query: 1 MQIKTLIHPLQG--CSP------SLIILNKTPALARFQSS-FSPPSLRFFTTNILHRGVK 51
+Q KTL + C+P SL + + P+ F+SS S P ++ L+R ++
Sbjct: 3 IQCKTLTFTVSSIPCNPKLPFPSSLTLRSWNPSFPSFRSSAVSGPK----SSLKLNRFLR 58
Query: 52 TSCISPGKELIFD-ENSDNSISL----SKNXXXXXXXXXXXXXXVKRGGLEKQSIWSQMK 106
+C S +EL+ D E + SIS + N VK L QSIW QMK
Sbjct: 59 -NCASTNQELVVDGETGNGSISELQGDAANGSISPVEVEAEVEEVKVDDLATQSIWGQMK 117
Query: 107 EIVMFTGPATGLWLCGPLMSLIDTAVIGQGSSVELAALGPGTVMCDYLTYVFMFLSIATS 166
EIVMFTGPA GLWLCGPLMSLIDTAVIGQGSS+ELAALGP TV+CDYL Y FMFLS+ATS
Sbjct: 118 EIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVICDYLCYTFMFLSVATS 177
Query: 167 NMVATSLARQDKNEVQHQISVLLFVGLACGFLMLLFTRFFGSWALTAFTGPRNVHLVPAA 226
N+VATSLARQDK+EVQHQIS+LLF+GLACG M++ TR FGSWALTAFTG +N +VPAA
Sbjct: 178 NLVATSLARQDKDEVQHQISILLFIGLACGVTMMVLTRLFGSWALTAFTGVKNADIVPAA 237
Query: 227 NTYVQIRSFAWPAVLVGLVAQSASLGMKDSLGPLKALAVASAINGIGDVALCSFLGYGIA 286
N YVQIR AWPAVL+G VAQSASLGMKDS GPLKALAVASAING+GDV LC+FLGYGIA
Sbjct: 238 NKYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVGDVVLCTFLGYGIA 297
Query: 287 GAAWATMVSQVVSAYMMIQSLNNKGYNAFSFSVPSTNELATILGLAGPVFITMISKVAFY 346
GAAWATMVSQVV+AYMM+ +LN KGY+AFSF VPS +EL TI GLA PVFITM+SKV FY
Sbjct: 298 GAAWATMVSQVVAAYMMMDALNKKGYSAFSFCVPSPSELLTIFGLAAPVFITMMSKVLFY 357
Query: 347 SLIIYFATSMGTNTVAAHQVMIQTYGMCSVWGEPLSQTAQSFMPELIYGVNRSLVKARMX 406
+L++YFATSMGTN +AAHQVM+Q Y M +VWGEPLSQTAQSFMPEL++G+NR+L KAR+
Sbjct: 358 TLLVYFATSMGTNIIAAHQVMLQIYTMSTVWGEPLSQTAQSFMPELLFGINRNLPKARVL 417
Query: 407 XXXXXXXXXXXXXXXXXXXASVPWFFPNIFTSDKSVIQEMHKVLIPYILAIVVSPSTHSL 466
+VPW FP IFT DK V EMHKV+IPY LA+ ++PSTHSL
Sbjct: 418 LKSLVIIGATLGIVVGTIGTAVPWLFPGIFTRDKVVTSEMHKVIIPYFLALSITPSTHSL 477
Query: 467 EGTLL 471
EGTLL
Sbjct: 478 EGTLL 482
>TAIR|locus:2120267 [details] [associations]
symbol:EDS5 "AT4G39030" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
transmembrane transport" evidence=IEA] [GO:0015238 "drug
transmembrane transporter activity" evidence=IEA;ISS] [GO:0015297
"antiporter activity" evidence=IEA;ISS] [GO:0016020 "membrane"
evidence=ISS] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0009697 "salicylic acid biosynthetic process" evidence=RCA;IMP]
[GO:0006952 "defense response" evidence=TAS] [GO:0009624 "response
to nematode" evidence=IEP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0009536 "plastid" evidence=IDA] [GO:0031348
"negative regulation of defense response" evidence=RCA;IMP]
[GO:0042742 "defense response to bacterium" evidence=RCA;IMP]
[GO:0000096 "sulfur amino acid metabolic process" evidence=RCA]
[GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006520 "cellular
amino acid metabolic process" evidence=RCA] [GO:0006546 "glycine
catabolic process" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006636 "unsaturated fatty acid
biosynthetic process" evidence=RCA] [GO:0006733 "oxidoreduction
coenzyme metabolic process" evidence=RCA] [GO:0006766 "vitamin
metabolic process" evidence=RCA] [GO:0008652 "cellular amino acid
biosynthetic process" evidence=RCA] [GO:0009072 "aromatic amino
acid family metabolic process" evidence=RCA] [GO:0009106 "lipoate
metabolic process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic
process" evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009684 "indoleacetic acid biosynthetic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009863
"salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0019748 "secondary metabolic process" evidence=RCA] [GO:0034976
"response to endoplasmic reticulum stress" evidence=RCA]
[GO:0043900 "regulation of multi-organism process" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045087 "innate immune response" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR002528
Pfam:PF01554 GO:GO:0016021 GO:GO:0005739 GO:GO:0009536
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0031348 GO:GO:0042742
GO:GO:0009624 GO:GO:0015238 GO:GO:0015297 eggNOG:COG0534
TIGRFAMs:TIGR00797 EMBL:AL035679 EMBL:AL161594 GO:GO:0009697
EMBL:AF416569 IPI:IPI00540268 RefSeq:NP_195614.2 UniGene:At.2846
UniGene:At.66625 ProteinModelPortal:Q945F0 STRING:Q945F0
TCDB:2.A.66.1.11 EnsemblPlants:AT4G39030.1 GeneID:830058
KEGG:ath:AT4G39030 TAIR:At4g39030 HOGENOM:HOG000029977
InParanoid:Q945F0 OMA:ELWKISA PhylomeDB:Q945F0
ProtClustDB:CLSN2915066 Genevestigator:Q945F0 GermOnline:AT4G39030
Uniprot:Q945F0
Length = 543
Score = 1346 (478.9 bits), Expect = 1.7e-137, P = 1.7e-137
Identities = 255/380 (67%), Positives = 300/380 (78%)
Query: 92 KRGGLEKQSIWSQMKEIVMFTGPATGLWLCGPLMSLIDTAVIGQGSSVELAALGPGTVMC 151
+RG L KQSIW QMKEIV FTGPA G+W+CGPLMSLIDT VIGQGSS+ELAALGPGTV+C
Sbjct: 86 ERGDLVKQSIWEQMKEIVKFTGPAMGMWICGPLMSLIDTVVIGQGSSIELAALGPGTVLC 145
Query: 152 DYLTYVFMFLSIATSNMVATSLARQDKNEVQHQISVLLFVGLACGFLMLLFTRFFGSWAL 211
D+++YVFMFLS+ATSNMVATSLA+QDK E QHQISVLLF+GL CG +MLL TR FG WA+
Sbjct: 146 DHMSYVFMFLSVATSNMVATSLAKQDKKEAQHQISVLLFIGLVCGLMMLLLTRLFGPWAV 205
Query: 212 TAFTGPRNVHLVPAANTYVQIRSFAWPAVLVGLVAQSASLGMKDSLGPLKALAVASAING 271
TAFT +N+ +VPAAN Y+QIR AWP +LVGLVAQSASLGMK+S GPLKALA A+ ING
Sbjct: 206 TAFTRGKNIEIVPAANKYIQIRGLAWPFILVGLVAQSASLGMKNSWGPLKALAAATIING 265
Query: 272 IGDVALCSFLGYGIAGAAWATMVSQVVSAYMMIQSLNNKGYNAFSFSVPSTNELATILGL 331
+GD LC FLG GIAGAAWAT SQ+VSAYMM+ SLN +GYNA+SF++PS EL I L
Sbjct: 266 LGDTILCLFLGQGIAGAAWATTASQIVSAYMMMDSLNKEGYNAYSFAIPSPQELWKISAL 325
Query: 332 AGPVFITMISKVAFYSLIIYFATSMGTNTVAAHQVMIQTYGMCSVWGEPLSQTAQSFMPE 391
A PVFI++ SK+AFYS IIY ATSMGT+ +AAHQVM QTY MC+VWGEPLSQTAQSFMPE
Sbjct: 326 AAPVFISIFSKIAFYSFIIYCATSMGTHVLAAHQVMAQTYRMCNVWGEPLSQTAQSFMPE 385
Query: 392 LIYGVNRSLVKARMXXXXXXXXXXXXXXXXXXXXASVPWFFPNIFTSDKSVIQEMHKVLI 451
++YG NR+L KAR +VP FP ++T DK +I EMH++LI
Sbjct: 386 MLYGANRNLPKARTLLKSLMIIGATLGLVLGVIGTAVPGLFPGVYTHDKVIISEMHRLLI 445
Query: 452 PYILAIVVSPSTHSLEGTLL 471
P+ +A+ P T SLEGTLL
Sbjct: 446 PFFMALSALPMTVSLEGTLL 465
>TAIR|locus:2057135 [details] [associations]
symbol:AT2G38330 "AT2G38330" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
transmembrane transport" evidence=IEA] [GO:0015238 "drug
transmembrane transporter activity" evidence=IEA] [GO:0015297
"antiporter activity" evidence=IEA;ISS] [GO:0016020 "membrane"
evidence=IEA;ISS] [GO:0055085 "transmembrane transport"
evidence=IEA] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0031969 GO:GO:0015238
GO:GO:0015297 eggNOG:COG0534 TIGRFAMs:TIGR00797 EMBL:AC004683
UniGene:At.37311 UniGene:At.74107 HOGENOM:HOG000253153
EMBL:BT004001 EMBL:BT005521 IPI:IPI00529504 PIR:T02512
RefSeq:NP_181367.2 ProteinModelPortal:Q84K71 IntAct:Q84K71
PaxDb:Q84K71 PRIDE:Q84K71 EnsemblPlants:AT2G38330.1 GeneID:818413
KEGG:ath:AT2G38330 TAIR:At2g38330 InParanoid:Q84K71 OMA:FAYDGVF
PhylomeDB:Q84K71 ProtClustDB:CLSN2918200 Genevestigator:Q84K71
Uniprot:Q84K71
Length = 521
Score = 247 (92.0 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 84/298 (28%), Positives = 144/298 (48%)
Query: 107 EIVMFTGPATGLWLCGPLMSLIDTAVIGQGSSVELAALGPGTVMCDYLTYVFM--FLSIA 164
EI+ PA P+ SL+DTA +G S ELAA+G + + ++ +F L++
Sbjct: 79 EIMSIALPAALALAADPITSLVDTAFVGHIGSAELAAVGVSVSVFNLVSKLFNVPLLNVT 138
Query: 165 TSNMVAT-SLARQDKNE-------VQHQISVLLF----VGLACGFLMLLFTRFFGSWALT 212
TS + ++A +D N+ V +S L VG+A + L + F
Sbjct: 139 TSFVAEEQAIAAKDDNDSIETSKKVLPSVSTSLVLAAGVGIAEAIALSLGSDFLMDVMAI 198
Query: 213 AFTGPRNVHLVPAANTYVQIRSFAWPAVLVGLVAQSASLGMKDSLGPLKALAVASAINGI 272
F P + PA ++++R++ P ++V L AQ A G KD+ PL A+ + +N +
Sbjct: 199 PFDSPMRI---PAEQ-FLRLRAYGAPPIVVALAAQGAFRGFKDTTTPLYAVVAGNVLNAV 254
Query: 273 GDVALCSFLGYGIAGAAWATMVSQVVSAYMMIQSLN-NKGYNAFSFSVPSTNELATILGL 331
D L LG+GI+GAA AT++S+ + A++++ LN N + V N+ GL
Sbjct: 255 LDPILIFVLGFGISGAAAATVISEYLIAFILLWKLNENVVLLSPQIKVGRANQYLKSGGL 314
Query: 332 AGPVFITMISKVAFYSLIIYFATSMGTNTVAAHQVMIQTYGMCSVWGEPLSQTAQSFM 389
+ T+ V F +L A G +A HQ++++ + S+ + L+ AQS +
Sbjct: 315 L--IGRTVALLVPF-TLATSLAAQNGPTQMAGHQIVLEIWLAVSLLTDALAIAAQSLL 369
>TAIR|locus:2077477 [details] [associations]
symbol:FRD3 "FERRIC REDUCTASE DEFECTIVE 3" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0006855 "drug transmembrane transport"
evidence=IEA] [GO:0015238 "drug transmembrane transporter activity"
evidence=IEA] [GO:0015297 "antiporter activity" evidence=IEA;ISS]
[GO:0016020 "membrane" evidence=IEA;ISS] [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006879 "cellular iron ion homeostasis"
evidence=IMP] [GO:0015137 "citrate transmembrane transporter
activity" evidence=IDA] [GO:0071281 "cellular response to iron ion"
evidence=IEP] [GO:0071369 "cellular response to ethylene stimulus"
evidence=IEP] [GO:0071732 "cellular response to nitric oxide"
evidence=IEP] [GO:0006826 "iron ion transport" evidence=RCA]
[GO:0010106 "cellular response to iron ion starvation"
evidence=RCA] [GO:0010167 "response to nitrate" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016021 GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0071281 GO:GO:0006879 GO:GO:0015238 GO:GO:0071732
GO:GO:0015297 EMBL:AC013483 eggNOG:COG0534 TIGRFAMs:TIGR00797
GO:GO:0005216 GO:GO:0071369 EMBL:AC074395 EMBL:AF448231
EMBL:AY056439 EMBL:AY057517 EMBL:AY133652 EMBL:BT006370
IPI:IPI00531718 RefSeq:NP_001154595.1 RefSeq:NP_187461.1
UniGene:At.17333 ProteinModelPortal:Q9SFB0 IntAct:Q9SFB0
STRING:Q9SFB0 PRIDE:Q9SFB0 EnsemblPlants:AT3G08040.1
EnsemblPlants:AT3G08040.2 GeneID:819995 KEGG:ath:AT3G08040
TAIR:At3g08040 HOGENOM:HOG000253153 InParanoid:Q9SFB0 OMA:ARSARHY
PhylomeDB:Q9SFB0 ProtClustDB:CLSN2915580 Genevestigator:Q9SFB0
GO:GO:0015137 Uniprot:Q9SFB0
Length = 526
Score = 165 (63.1 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 60/218 (27%), Positives = 98/218 (44%)
Query: 175 RQDKNEVQHQISVLLFVGLACGFLMLLFTRFFGSWALTAFTGPR-NVHLVPAANTYVQIR 233
+++K ++ S + +GL G + +F F S L G + N ++ A+ Y+ IR
Sbjct: 162 KKEKRTIR-TASTAMILGLILGLVQAIFL-IFSSKLLLGVMGVKPNSPMLSPAHKYLSIR 219
Query: 234 SFAWPAVLVGLVAQSASLGMKDSLGPLKALAVASAINGIGDVALCSFLGYGIAGAAWATM 293
+ PA+L+ L Q G KD+ PL A VA IN + D L GI GAA A +
Sbjct: 220 ALGAPALLLSLAMQGIFRGFKDTKTPLFATVVADVINIVLDPIFIFVLRLGIIGAAIAHV 279
Query: 294 VSQVVSAYMMIQSLNNKGYNAFSFSVPSTNELATILGLA-GPVFITMISKVAF-YSLIIY 351
+SQ ++ L K N P+ +L L G + + V F +L
Sbjct: 280 ISQYFMTLILFVFLAKK-VNLIP---PNFGDLQFGRFLKNGLLLLARTIAVTFCQTLAAA 335
Query: 352 FATSMGTNTVAAHQVMIQTYGMCSVWGEPLSQTAQSFM 389
A +GT +AA Q+ +Q + S+ + L+ Q+ +
Sbjct: 336 MAARLGTTPMAAFQICLQVWLTSSLLNDGLAVAGQAIL 373
Score = 83 (34.3 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 106 KEIVMFTGPATGLWLCGPLMSLIDTAVIGQGSSVELAALGPGTVMCDYLTYVFMF--LSI 163
+EI+ PA P+ SLIDTA +G+ +V+LAA+G + + + + +F +S+
Sbjct: 35 REILGIAFPAALALAADPIASLIDTAFVGRLGAVQLAAVGVSIAIFNQASRITIFPLVSL 94
Query: 164 ATSNMVATSLARQDKNE 180
TS + + K E
Sbjct: 95 TTSFVAEEDTMEKMKEE 111
>UNIPROTKB|Q8E8P4 [details] [associations]
symbol:dinF "DNA damage-inducible multidrug and toxin
efflux protein DinF" species:211586 "Shewanella oneidensis MR-1"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR002528
Pfam:PF01554 GO:GO:0016020 GO:GO:0015238 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0015297 TIGRFAMs:TIGR00797
HOGENOM:HOG000253154 RefSeq:NP_720133.1 GeneID:1172200
KEGG:son:SO_4617 PATRIC:23528897 OMA:FYNILAN ProtClustDB:CLSK907734
Uniprot:Q8E8P4
Length = 455
Score = 198 (74.8 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 77/288 (26%), Positives = 135/288 (46%)
Query: 123 PLMSLIDTAVIGQGSSVE-LAALGPGTVMCDYLTYVFMFLSIATSNMVATSLARQDKNEV 181
PL+ L+DTAVIG S L + G+ + + ++ FL +AT+ +VA + D N
Sbjct: 36 PLLGLVDTAVIGHLSDAYYLGGVALGSTIITLIIWLLGFLRMATTGLVAQAYGANDIN-A 94
Query: 182 QHQISV---LLFVGLACGFLMLLFTRFFGSWALTAFTGPRNVHLVPAANTYVQIRSFAWP 238
Q ++ V +L GL G M+L S AL+ F+ +V + Y QIR ++ P
Sbjct: 95 QLKLLVQGAMLATGL--GIAMILLQVPLLSLALS-FS-EASVEVERYCREYFQIRIWSTP 150
Query: 239 AVLVGLVAQSASLGMKDSLGPLKALAVASAINGIGDVALCSFLGYGIAGAAWATMVSQV- 297
L+ LV LG + + L A+ N I DV G+G+ GAA A++ + +
Sbjct: 151 FALLNLVMLGWLLGRQQPKAAMWQLIFANVANIILDVLFVLGFGWGVKGAALASVFADIT 210
Query: 298 ---VSAYMMIQSLN---NKGYNAFSFSVPSTNELATILGLAGPVFITMISKVAFYSLIIY 351
V+ YM++Q + N + + T +L L +FI + ++ + +
Sbjct: 211 AFSVALYMVLQQVKLIPNYPFAEIRAHIRFTG-FGQLLRLNSDIFIRSLCLQTAFAFMTF 269
Query: 352 FATSMGTNTVAAHQVMIQTYGMCSVWGEPLSQTAQSFMPELIYGVNRS 399
+G NTVAA+ V++ + S + ++ A++ + + YG R+
Sbjct: 270 HGAGLGDNTVAANAVLLNLLLLISYALDGIAYYAEAEVGKA-YGQKRA 316
>TIGR_CMR|SO_4617 [details] [associations]
symbol:SO_4617 "DNA-damage-inducible protein F"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016020 GO:GO:0015238 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0015297 TIGRFAMs:TIGR00797 HOGENOM:HOG000253154
RefSeq:NP_720133.1 GeneID:1172200 KEGG:son:SO_4617 PATRIC:23528897
OMA:FYNILAN ProtClustDB:CLSK907734 Uniprot:Q8E8P4
Length = 455
Score = 198 (74.8 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 77/288 (26%), Positives = 135/288 (46%)
Query: 123 PLMSLIDTAVIGQGSSVE-LAALGPGTVMCDYLTYVFMFLSIATSNMVATSLARQDKNEV 181
PL+ L+DTAVIG S L + G+ + + ++ FL +AT+ +VA + D N
Sbjct: 36 PLLGLVDTAVIGHLSDAYYLGGVALGSTIITLIIWLLGFLRMATTGLVAQAYGANDIN-A 94
Query: 182 QHQISV---LLFVGLACGFLMLLFTRFFGSWALTAFTGPRNVHLVPAANTYVQIRSFAWP 238
Q ++ V +L GL G M+L S AL+ F+ +V + Y QIR ++ P
Sbjct: 95 QLKLLVQGAMLATGL--GIAMILLQVPLLSLALS-FS-EASVEVERYCREYFQIRIWSTP 150
Query: 239 AVLVGLVAQSASLGMKDSLGPLKALAVASAINGIGDVALCSFLGYGIAGAAWATMVSQV- 297
L+ LV LG + + L A+ N I DV G+G+ GAA A++ + +
Sbjct: 151 FALLNLVMLGWLLGRQQPKAAMWQLIFANVANIILDVLFVLGFGWGVKGAALASVFADIT 210
Query: 298 ---VSAYMMIQSLN---NKGYNAFSFSVPSTNELATILGLAGPVFITMISKVAFYSLIIY 351
V+ YM++Q + N + + T +L L +FI + ++ + +
Sbjct: 211 AFSVALYMVLQQVKLIPNYPFAEIRAHIRFTG-FGQLLRLNSDIFIRSLCLQTAFAFMTF 269
Query: 352 FATSMGTNTVAAHQVMIQTYGMCSVWGEPLSQTAQSFMPELIYGVNRS 399
+G NTVAA+ V++ + S + ++ A++ + + YG R+
Sbjct: 270 HGAGLGDNTVAANAVLLNLLLLISYALDGIAYYAEAEVGKA-YGQKRA 316
>TAIR|locus:2008236 [details] [associations]
symbol:AT1G51340 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
transmembrane transport" evidence=IEA] [GO:0015238 "drug
transmembrane transporter activity" evidence=IEA] [GO:0015297
"antiporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0019761 "glucosinolate biosynthetic process" evidence=RCA]
InterPro:IPR002528 Pfam:PF01554 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0015238 GO:GO:0015297
eggNOG:COG0534 TIGRFAMs:TIGR00797 GO:GO:0005216 EMBL:AC006085
OMA:GAEMRNS HOGENOM:HOG000253153 EMBL:BX818238 IPI:IPI00518906
IPI:IPI00524609 PIR:D96551 RefSeq:NP_564588.2 RefSeq:NP_974000.1
UniGene:At.26628 ProteinModelPortal:Q9SYD6 PaxDb:Q9SYD6
PRIDE:Q9SYD6 EnsemblPlants:AT1G51340.2 GeneID:841557
KEGG:ath:AT1G51340 TAIR:At1g51340 InParanoid:Q9SYD6
PhylomeDB:Q9SYD6 ProtClustDB:CLSN2918502 Genevestigator:Q9SYD6
Uniprot:Q9SYD6
Length = 515
Score = 140 (54.3 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 55/228 (24%), Positives = 99/228 (43%)
Query: 165 TSNMVATSLARQDKNEVQHQISVLLFVGLACGFLMLLFTRFFGSWALTAFTGPRNVH-LV 223
+S++ + S K + S L+ +G G +F + L +F G ++ ++
Sbjct: 148 SSSIFSISKPPAKKRNIPSASSALI-IGGVLGLFQAVFL-ISAAKPLLSFMGVKHDSPMM 205
Query: 224 PAANTYVQIRSFAWPAVLVGLVAQSASLGMKDSLGPLKALAVASAINGIGDVALCSFLGY 283
+ Y+ +RS PAVL+ L AQ G KD+ PL A + N I D
Sbjct: 206 RPSQRYLSLRSLGAPAVLLSLAAQGVFRGFKDTTTPLFATVIGDVTNIILDPIFIFVFRL 265
Query: 284 GIAGAAWATMVSQVVSAYMMIQSLNNKGYNAFSFSVPSTNELATILGLAGPVFITM-ISK 342
G+ GAA A ++SQ + +++ L + + F+ S T L + + M +
Sbjct: 266 GVTGAATAHVISQYLMCGILLWKLMGQ-VDIFNMS---TKHLQFCRFMKNGFLLLMRVIA 321
Query: 343 VAF-YSLIIYFATSMGTNTVAAHQVMIQTYGMCSVWGEPLSQTAQSFM 389
V F +L A G+ ++AA QV +Q + S+ + + Q+ +
Sbjct: 322 VTFCVTLSASLAAREGSTSMAAFQVCLQVWLATSLLADGYAVAGQAIL 369
Score = 89 (36.4 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 107 EIVMFTGPATGLWLCGPLMSLIDTAVIGQGSSVELAALGPGTVMCDYLTYVFMF--LSIA 164
EI PA P+ SL+DTA IGQ VELAA+G + + ++ + +F +SI
Sbjct: 35 EIARIALPAALALTADPIASLVDTAFIGQIGPVELAAVGVSIALFNQVSRIAIFPLVSIT 94
Query: 165 TS 166
TS
Sbjct: 95 TS 96
>UNIPROTKB|Q9KVQ1 [details] [associations]
symbol:VC_0090 "DNA-damage-inducible protein F"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR002528
Pfam:PF01554 GO:GO:0016020 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0015238 GO:GO:0015297 KO:K03327 TIGRFAMs:TIGR00797 PIR:G82364
RefSeq:NP_229749.1 DNASU:2615829 GeneID:2615829 KEGG:vch:VC0090
PATRIC:20079236 OMA:ATKGSEM ProtClustDB:CLSK873856 Uniprot:Q9KVQ1
Length = 454
Score = 179 (68.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 63/263 (23%), Positives = 120/263 (45%)
Query: 123 PLMSLIDTAVIGQGSSV-ELAALGPGTVMCDYLTYVFMFLSIATSNMVATSLARQDKNEV 181
PL+ L+D AVIG L + G+ M ++ FL ++T+ + A + Q+ ++
Sbjct: 35 PLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLRMSTTGLTAQAHGAQNSQQL 94
Query: 182 QHQISVLLFVGLACGFLMLLFTRFFGSWALTAFTGPRNVHLVPAANTYVQIRSFAWPAVL 241
+ + L L LLF R L + + A Y IR+++ PA L
Sbjct: 95 ARVLLQGSVIALGLAALFLLFHRPVAE--LIFHFSDASSEVKTYAEAYFYIRAWSAPAAL 152
Query: 242 VGLVAQSASLGMKDSLGPLKALAVASAINGIGDVALCSFLGYGIAGAAWATMVSQVVSAY 301
+ V LG +++ P+ + + + N + D+ L LG + GAA A++++
Sbjct: 153 LNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLGLGLKVEGAAIASVIADYAGLL 212
Query: 302 MMIQSLNN--KGYNA---FSFSVPS-TNELATILGLAGPVFITMISKVAFYSLIIYFATS 355
+ + + + FSF +PS T EL+ ++ L +F+ + A +S + + +
Sbjct: 213 FGLLCVGRYWRQHQLPAPFSF-IPSLTKELSRLVALNRDIFLRSLCLQAVFSFMTFQGAA 271
Query: 356 MGTNTVAAHQVMIQ-----TYGM 373
+G + VAA+ V++ +YGM
Sbjct: 272 LGDDIVAANAVLMSFLMMISYGM 294
>TIGR_CMR|VC_0090 [details] [associations]
symbol:VC_0090 "DNA-damage-inducible protein F" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016020
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0015238 GO:GO:0015297
KO:K03327 TIGRFAMs:TIGR00797 PIR:G82364 RefSeq:NP_229749.1
DNASU:2615829 GeneID:2615829 KEGG:vch:VC0090 PATRIC:20079236
OMA:ATKGSEM ProtClustDB:CLSK873856 Uniprot:Q9KVQ1
Length = 454
Score = 179 (68.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 63/263 (23%), Positives = 120/263 (45%)
Query: 123 PLMSLIDTAVIGQGSSV-ELAALGPGTVMCDYLTYVFMFLSIATSNMVATSLARQDKNEV 181
PL+ L+D AVIG L + G+ M ++ FL ++T+ + A + Q+ ++
Sbjct: 35 PLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLRMSTTGLTAQAHGAQNSQQL 94
Query: 182 QHQISVLLFVGLACGFLMLLFTRFFGSWALTAFTGPRNVHLVPAANTYVQIRSFAWPAVL 241
+ + L L LLF R L + + A Y IR+++ PA L
Sbjct: 95 ARVLLQGSVIALGLAALFLLFHRPVAE--LIFHFSDASSEVKTYAEAYFYIRAWSAPAAL 152
Query: 242 VGLVAQSASLGMKDSLGPLKALAVASAINGIGDVALCSFLGYGIAGAAWATMVSQVVSAY 301
+ V LG +++ P+ + + + N + D+ L LG + GAA A++++
Sbjct: 153 LNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLGLGLKVEGAAIASVIADYAGLL 212
Query: 302 MMIQSLNN--KGYNA---FSFSVPS-TNELATILGLAGPVFITMISKVAFYSLIIYFATS 355
+ + + + FSF +PS T EL+ ++ L +F+ + A +S + + +
Sbjct: 213 FGLLCVGRYWRQHQLPAPFSF-IPSLTKELSRLVALNRDIFLRSLCLQAVFSFMTFQGAA 271
Query: 356 MGTNTVAAHQVMIQ-----TYGM 373
+G + VAA+ V++ +YGM
Sbjct: 272 LGDDIVAANAVLMSFLMMISYGM 294
>UNIPROTKB|P28303 [details] [associations]
symbol:dinF "DinF MATE Transporter" species:83333
"Escherichia coli K-12" [GO:0015297 "antiporter activity"
evidence=IEA] [GO:0015238 "drug transmembrane transporter activity"
evidence=IEA] [GO:0006855 "drug transmembrane transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016021 GO:GO:0005886 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0015238
EMBL:U00006 GO:GO:0015297 eggNOG:COG0534 KO:K03327
TIGRFAMs:TIGR00797 EMBL:L02362 PIR:C65212 RefSeq:NP_418468.3
RefSeq:YP_492187.1 ProteinModelPortal:P28303 TCDB:2.A.66.1.4
EnsemblBacteria:EBESCT00000004175 EnsemblBacteria:EBESCT00000014884
GeneID:12932728 GeneID:948554 KEGG:ecj:Y75_p3931 KEGG:eco:b4044
PATRIC:32123625 EchoBASE:EB1454 EcoGene:EG11491
HOGENOM:HOG000253154 OMA:GAEMRNS ProtClustDB:PRK10367
BioCyc:EcoCyc:DINF-MONOMER BioCyc:ECOL316407:JW4004-MONOMER
Genevestigator:P28303 Uniprot:P28303
Length = 459
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 59/251 (23%), Positives = 111/251 (44%)
Query: 123 PLMSLIDTAVIGQ-GSSVELAALGPGTVMCDYLTYVFMFLSIATSNMVATSLARQDKNEV 181
PL+ L+DTAVIG S V L + G +L + +FL ++T+ + A + ++ +
Sbjct: 44 PLLGLVDTAVIGHLDSPVYLGGVAVGATATSFLFMLLLFLRMSTTGLTAQAYGAKNPQAL 103
Query: 182 QHQISVLLFVGLACGFLMLLFTRFFGSWALTAFTGPRNVHLVPAANTYVQIRSFAWPAVL 241
+ L + L G L+ L AL G V + A +++IR + PA L
Sbjct: 104 ARTLVQPLLLALGAGALIALLRTPIIDLALHIVGGSEAV--LEQARRFLEIRWLSAPASL 161
Query: 242 VGLVAQSASLGMKDSLGPLKALAVASAINGIGDVALCSFLGYGIAGAAWATMVSQ----V 297
LV LG++ + P+ L V + +N + DV L L + GAA AT++++ +
Sbjct: 162 ANLVLLGWLLGVQYARAPVILLVVGNILNIVLDVWLVMGLHMNVQGAALATVIAEYATLL 221
Query: 298 VSAYMMIQSLNNKGYNAFSFSVPSTNELATILGLAGPVFITMISKVAFYSLIIYFATSMG 357
+ M+ + L +G + +L L + + + + I +G
Sbjct: 222 IGLLMVRKILKLRGISGEMLKTAWRGNFRRLLALNRDIMLRSLLLQLCFGAITVLGARLG 281
Query: 358 TNTVAAHQVMI 368
++ +A + V++
Sbjct: 282 SDIIAVNAVLM 292
>UNIPROTKB|Q5LPD9 [details] [associations]
symbol:dinF "DNA-damage-inducible protein F" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016020
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0015238 GO:GO:0015297
KO:K03327 TIGRFAMs:TIGR00797 HOGENOM:HOG000253154
RefSeq:YP_168117.1 GeneID:3193509 KEGG:sil:SPO2909 PATRIC:23379243
OMA:PMILANI ProtClustDB:CLSK933990 Uniprot:Q5LPD9
Length = 441
Score = 163 (62.4 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 63/258 (24%), Positives = 123/258 (47%)
Query: 123 PLMSLIDTAVIGQ-GSSVELAALGPGTVMCDYLTYVFMFLSIATSNMVATSLARQDKNEV 181
P++ +DTAV+GQ + +AA+G G ++ + ++F FL + T+ + A + + EV
Sbjct: 27 PILGAVDTAVVGQIPQAAPIAAVGVGAIILSAIYWIFGFLRMGTAGLTAQAHGAGHEGEV 86
Query: 182 QHQISVLLFVGLACGF-LMLLFTRFFGSWALTAFTGPRNVHLVPAANTYVQIRSFAWPAV 240
++ L +G+A G L+LL + W A + P + + A Y+ IR ++ PA
Sbjct: 87 AALLTRSLMIGVAGGVALILLQLPIY--WGALAVS-PASAEVETLARGYMSIRIWSAPAA 143
Query: 241 LVGLVAQSASLGMKDSLGPLKALAVASA-INGIG---DVALCSFLGYGIAGAAWATMVSQ 296
+A G +L +A+ V +NG+ D+ LG+G+ G A+AT +++
Sbjct: 144 ----IAIYGITGWLIALERTRAVLVLQLWMNGLNMGLDLWFVLGLGWGVNGVAFATFLAE 199
Query: 297 ----VVSAYMMIQSLNNKGYNAFSFSVPSTNELATILGLAGPVFI-TMISKVAFYSLIIY 351
++ + N + ++ V L + + + I +M+ + F S ++
Sbjct: 200 WTGLAFGLWLCRDAFLNPRWRDWA-RVFEAARLRRMAVVNTDILIRSMLLQAIFVSFLL- 257
Query: 352 FATSMGTNTVAAHQVMIQ 369
G T+AA+QV++Q
Sbjct: 258 LGGRFGDVTLAANQVLLQ 275
>TIGR_CMR|SPO_2909 [details] [associations]
symbol:SPO_2909 "DNA-damage-inducible protein F"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016020 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0015238
GO:GO:0015297 KO:K03327 TIGRFAMs:TIGR00797 HOGENOM:HOG000253154
RefSeq:YP_168117.1 GeneID:3193509 KEGG:sil:SPO2909 PATRIC:23379243
OMA:PMILANI ProtClustDB:CLSK933990 Uniprot:Q5LPD9
Length = 441
Score = 163 (62.4 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 63/258 (24%), Positives = 123/258 (47%)
Query: 123 PLMSLIDTAVIGQ-GSSVELAALGPGTVMCDYLTYVFMFLSIATSNMVATSLARQDKNEV 181
P++ +DTAV+GQ + +AA+G G ++ + ++F FL + T+ + A + + EV
Sbjct: 27 PILGAVDTAVVGQIPQAAPIAAVGVGAIILSAIYWIFGFLRMGTAGLTAQAHGAGHEGEV 86
Query: 182 QHQISVLLFVGLACGF-LMLLFTRFFGSWALTAFTGPRNVHLVPAANTYVQIRSFAWPAV 240
++ L +G+A G L+LL + W A + P + + A Y+ IR ++ PA
Sbjct: 87 AALLTRSLMIGVAGGVALILLQLPIY--WGALAVS-PASAEVETLARGYMSIRIWSAPAA 143
Query: 241 LVGLVAQSASLGMKDSLGPLKALAVASA-INGIG---DVALCSFLGYGIAGAAWATMVSQ 296
+A G +L +A+ V +NG+ D+ LG+G+ G A+AT +++
Sbjct: 144 ----IAIYGITGWLIALERTRAVLVLQLWMNGLNMGLDLWFVLGLGWGVNGVAFATFLAE 199
Query: 297 ----VVSAYMMIQSLNNKGYNAFSFSVPSTNELATILGLAGPVFI-TMISKVAFYSLIIY 351
++ + N + ++ V L + + + I +M+ + F S ++
Sbjct: 200 WTGLAFGLWLCRDAFLNPRWRDWA-RVFEAARLRRMAVVNTDILIRSMLLQAIFVSFLL- 257
Query: 352 FATSMGTNTVAAHQVMIQ 369
G T+AA+QV++Q
Sbjct: 258 LGGRFGDVTLAANQVLLQ 275
>UNIPROTKB|Q0BYJ3 [details] [associations]
symbol:HNE_2771 "Putative DNA-damage-inducible protein F"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016020 GO:GO:0006974 GO:GO:0015238 GO:GO:0015297
eggNOG:COG0534 TIGRFAMs:TIGR00797 EMBL:CP000158
GenomeReviews:CP000158_GR HOGENOM:HOG000253154 RefSeq:YP_761450.1
STRING:Q0BYJ3 GeneID:4290229 KEGG:hne:HNE_2771 PATRIC:32218415
OMA:RLNTDIF ProtClustDB:CLSK777581
BioCyc:HNEP228405:GI69-2778-MONOMER Uniprot:Q0BYJ3
Length = 437
Score = 155 (59.6 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 56/247 (22%), Positives = 109/247 (44%)
Query: 127 LIDTAVIGQ-GSSVELAALGPGTVMCDYLTYVFMFLSIATSNMVATSLARQDKNEVQHQI 185
++DTAV+G+ G++ ELAA+G V+ ++L + F FL +AT+ + A + D E +
Sbjct: 30 IVDTAVMGRYGTAAELAAVGLAAVVFNFLYWGFGFLRMATTGLTAQADGAGDTGETNAIL 89
Query: 186 SVLLFVGLACGFLMLLFTRFFGSWALTAFTGPRNVHLVPAANTYVQIRSFAWPAVLVGLV 245
L +G G L+L+ ++L F V AA Y R + PA L+G
Sbjct: 90 KRALLLGGGLGLLILITFPLVSHFSLALFQADAPVEAEAAA--YFWGRIWGAPAALMGFA 147
Query: 246 AQSASLGMKDSLGPLKALAVASAINGIGDVALCSFLGYGIAGAAWATMVSQ---VVSAYM 302
+G + L +A+NG D + +G AG T +++ + +
Sbjct: 148 ITGWLIGTGRTRALLAVQIGMNAVNGGLDFLFVAVFDWGPAGIGVGTAMAEWAALALGLV 207
Query: 303 MIQSLNNKGYNAFSFSVPSTNELATILGLAGPVFITMISKVAFYSLIIYFATSMGTNTVA 362
+++S G + +L +++ + I ++ + ++ + G +A
Sbjct: 208 IVRSALGPGGQLLDRA-----KLTSLISANRDIMIRTLALLFSFAWFVNSGAQQGIAVMA 262
Query: 363 AHQVMIQ 369
+QV++Q
Sbjct: 263 GNQVLLQ 269
>TIGR_CMR|GSU_3129 [details] [associations]
symbol:GSU_3129 "MATE efflux family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006855 "drug
transmembrane transport" evidence=ISS] [GO:0042493 "response to
drug" evidence=ISS] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016020
GO:GO:0015238 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0015297
TIGRFAMs:TIGR00797 OMA:MTVFWGL HOGENOM:HOG000056140
RefSeq:NP_954170.1 GeneID:2687697 KEGG:gsu:GSU3129 PATRIC:22029115
ProtClustDB:CLSK829126 BioCyc:GSUL243231:GH27-3131-MONOMER
Uniprot:Q747Y6
Length = 452
Score = 147 (56.8 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 74/329 (22%), Positives = 137/329 (41%)
Query: 124 LMSLIDTAVIGQGSSVELAALGPGTVMCDYLTYVFMFLSIATSNMVATSLARQDKNEVQH 183
L++++D ++G + +AA G G ++ VF L+ T+ ++A + E +
Sbjct: 40 LVAIVDIFLVGGLGAAAIAATGLGQLLVFVTMTVFWGLATGTTVVIAHLRGAGQRREARR 99
Query: 184 QISVLLFVGLACGFLMLLFTR--FFGSWALTAFTGPRNVHLVPAANTYVQIRSFAWPAVL 241
LAC + + +F S L AF G R+ L AA Y ++ F + A
Sbjct: 100 ---AAFAASLACAGMTAAASALGWFFSDDLAAFLGARDDVLHLAAG-YTRL-VFLYLAFT 154
Query: 242 VGLVAQSASL-GMKDSLGPLKALAVASAING-IGDVALCSFLGY---GIAGAAWATMVSQ 296
GL SA + G+ ++ P++A+ + + ++ I + LG G+ GAA A S+
Sbjct: 155 TGLNILSAIMHGIGNTRTPMQAIILVNILHVLIAWPLIYGKLGLPAMGVTGAAIAINASE 214
Query: 297 VVS-AYMMIQSLNNKGYNAFSFSVPSTNELATILGLAGPVFITMISKVAFYSLIIYFATS 355
+ Y+++Q+L + P T + I + PV + I++ F
Sbjct: 215 AIGFLYLLVQALR---LDYIRIGRPDTGLMGRIWRVGWPVALERIAQQGGQLFYSKFIIG 271
Query: 356 MGTNTVAAHQVMIQTYGMCSVWGEPLSQTAQSFMPELIYGVNRSLVKARMXXXXXXXXXX 415
GT AAHQ+ + + + G + A + M + + G + +AR+
Sbjct: 272 YGTAAYAAHQIGLSIESLSFMPGAGMGIAAATLMGQAL-GAKKYR-RARISHREALRLAV 329
Query: 416 XXXXXXXXXXASVPWFFPNIFTSDKSVIQ 444
+VP +FT D +VI+
Sbjct: 330 IVMGTMAAVFLTVPGPLIGLFTRDPAVIE 358
>UNIPROTKB|Q48DJ8 [details] [associations]
symbol:dinF "DNA-damage-inducible protein F" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0006974 "response
to DNA damage stimulus" evidence=ISS] InterPro:IPR002528
Pfam:PF01554 GO:GO:0016020 GO:GO:0006974 GO:GO:0015238
GO:GO:0015297 EMBL:CP000058 GenomeReviews:CP000058_GR
eggNOG:COG0534 KO:K03327 TIGRFAMs:TIGR00797 HOGENOM:HOG000253154
OMA:WAMGFLR RefSeq:YP_276543.1 STRING:Q48DJ8 GeneID:3557074
KEGG:psp:PSPPH_4427 PATRIC:19978345 ProtClustDB:CLSK868921
Uniprot:Q48DJ8
Length = 446
Score = 138 (53.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 58/254 (22%), Positives = 116/254 (45%)
Query: 123 PLMSLIDTAVIGQ-GSSVELAALGPGTVMCDYLTYVFMFLSIATSNMVATSLARQDKNEV 181
PL++L+D+AVIG + + ++ G+ + +L + FL + T+ A + R D +
Sbjct: 32 PLVALVDSAVIGHLPHAHQSGSVAVGSTLYTFLAWAMGFLRMGTTGFAAQAAGRNDSAAL 91
Query: 182 QHQI--SVLLFVGLACGFLMLLFTRFFGSWALTAFTGPRNVHLVPAANTYVQIRSFAWPA 239
+ + +LL +GLA L+ + F AL A P + L + R F PA
Sbjct: 92 RRILLQGLLLAIGLA--LLLGVIALPFSHLAL-AMMQP-SADLQQMTLDFFYTRLFGLPA 147
Query: 240 VLVGLVAQSASLGMKDSLGPLKALAVASAINGIGDVALCSFLGYGIAGAAWATMVSQVVS 299
L LG +++ PL L + + +N ++ L +G+ G+A A+++++
Sbjct: 148 ALASYALVGWFLGAQNARAPLAILLITNLVNIALNLWFVIGLDWGVVGSARASVLAEWTG 207
Query: 300 AYMMIQSLNNKGYNAFSFSVP-STNELAT----ILGLAGPVFITMISKVAFYSLIIYFAT 354
+ + L K A+ + S +L + +L + +F+ ++ + LI
Sbjct: 208 VVLGLL-LARKTLRAWPGQIVWSALKLWSNWRPLLAVNRDIFLRTLALQSVMFLITVQGA 266
Query: 355 SMGTNTVAAHQVMI 368
+G TVAA+ +++
Sbjct: 267 RLGDATVAANALLL 280
>TIGR_CMR|BA_1402 [details] [associations]
symbol:BA_1402 "MATE efflux family protein" species:198094
"Bacillus anthracis str. Ames" [GO:0006855 "drug transmembrane
transport" evidence=ISS] [GO:0042493 "response to drug"
evidence=ISS] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016021
GO:GO:0005886 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006811 GO:GO:0015238 GO:GO:0015297
eggNOG:COG0534 KO:K03327 TIGRFAMs:TIGR00797 HOGENOM:HOG000038538
ProtClustDB:PRK01766 RefSeq:NP_843859.1 RefSeq:YP_018023.1
RefSeq:YP_027564.1 DNASU:1084137 EnsemblBacteria:EBBACT00000010144
EnsemblBacteria:EBBACT00000016354 EnsemblBacteria:EBBACT00000019704
GeneID:1084137 GeneID:2819818 GeneID:2849552 KEGG:ban:BA_1402
KEGG:bar:GBAA_1402 KEGG:bat:BAS1295 OMA:FASFHIF
BioCyc:BANT260799:GJAJ-1369-MONOMER
BioCyc:BANT261594:GJ7F-1429-MONOMER Uniprot:Q81T85
Length = 453
Score = 135 (52.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 64/300 (21%), Positives = 125/300 (41%)
Query: 97 EKQSIWSQMKEIVMFTGPATGLWLCGPLMSLIDTAVIGQGSSVELAALGPGTVMCDYLTY 156
E S ++K+ V+ P + MS DT + G S ++LA + GT + ++
Sbjct: 3 ETNSFSQKLKQFVLLFFPIFVTQMSLFAMSFFDTTMSGHASPIDLAGVAIGTSIWIPVST 62
Query: 157 VFMFLSIATSNMVATSLARQDKNEVQHQISVLLFVGLACGFLMLLFTRFFGSWALTAFTG 216
+ +AT+ +VA + + K +V H I +++ + F+++L G + +T
Sbjct: 63 GLTGILMATTPIVAQLVGSKKKEDVPHVIIQAVYLAICASFVVILI----GLFTVTPILN 118
Query: 217 PRNVHLVPAANTYVQIRSFAWPAV-LVGLVAQSASLGMKDSLGP--------LKALAVAS 267
+ P Q S A+ ++ L + G D+LG L +L +
Sbjct: 119 GMRLE-EPVERIAAQFLSII--AIGIIPLFTYTVLRGFIDALGKTRTTMIITLLSLPINV 175
Query: 268 AINGI---GDVALCSFLGYGIAGAAWATMVSQVVSAYMMIQSLNN-KGYNAFS-FSVPST 322
+N + G+ G G A A+ AT ++ M+I++ +N F PS
Sbjct: 176 VLNYVLIFGNFGFPKLGGVGAAIASAATYWCILIITVMIIRTKEPFASFNIFKQLYRPSL 235
Query: 323 NELATILGLAGPVFITMISKVAFYSLIIYFATSMGTNTVAAHQVMIQTYGMCSVWGEPLS 382
+ L L P+ + + + ++ + ++ T T+AAHQ + + ++ PLS
Sbjct: 236 SSWKEFLKLGVPIGFAIFFETSIFAAVTLMMSNFSTTTIAAHQAAMNFASL--LYMTPLS 293
>UNIPROTKB|P76352 [details] [associations]
symbol:yeeO "YeeO MATE transporter" species:83333
"Escherichia coli K-12" [GO:0015297 "antiporter activity"
evidence=IEA] [GO:0015238 "drug transmembrane transporter activity"
evidence=IEA] [GO:0006855 "drug transmembrane transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002528 Pfam:PF01554 GO:GO:0016021 GO:GO:0005886
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0015238 GO:GO:0015297 eggNOG:COG0534
TIGRFAMs:TIGR00797 PIR:B64963 RefSeq:NP_416491.2 RefSeq:YP_490230.1
ProteinModelPortal:P76352 SMR:P76352
EnsemblBacteria:EBESCT00000000101 EnsemblBacteria:EBESCT00000017686
GeneID:12930361 GeneID:946506 KEGG:ecj:Y75_p1948 KEGG:eco:b1985
PATRIC:32119301 EchoBASE:EB3164 EcoGene:EG13383
HOGENOM:HOG000056139 ProtClustDB:PRK10189
BioCyc:EcoCyc:YEEO-MONOMER BioCyc:ECOL316407:JW1965-MONOMER
Genevestigator:P76352 Uniprot:P76352
Length = 495
Score = 135 (52.6 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 56/276 (20%), Positives = 112/276 (40%)
Query: 121 CGPLMSLIDTAVIGQGSSVELAALGPGTVMCDYLTYVFMFLSIATSNMVATSLARQDKNE 180
C LM ++ T ++ +A +G + F + + T+ +VA SL ++D+
Sbjct: 55 CVLLMGVLSTFLVSWLGKDAMAGVGLADSFNMVIMAFFAAIDLGTTVVVAFSLGKRDRRR 114
Query: 181 VQHQISVLLFVGLACGFLMLLFTRFFGSWALTAFTGPRNVHLVPAANTYVQIRSFAWPAV 240
+ L + L+ FG + G + A TY+++ ++PA
Sbjct: 115 ARVATRQSLVIMTLFAVLLATLIHHFGEQIIDFVAGDATTEVKALALTYLELTVLSYPAA 174
Query: 241 LVGLVAQSASLGMKDSLGPLK---ALAVASAI-NGIGDVALCSFLGYGIAGAAWATMVSQ 296
+ L+ A G ++ PL +L + + I +GI L S+ G G GA +S+
Sbjct: 175 AITLIGSGALRGAGNTKIPLLINGSLNILNIIISGILIYGLFSWPGLGFVGAGLGLTISR 234
Query: 297 VVSAYMMIQSLNNKGYN-AFSFSVPSTNE------LATILGLAGPVFITMISKVAFYSLI 349
+ A ++ L G+N A S+ S + + ++G+ P + + + L
Sbjct: 235 YIGAVAILWVLAI-GFNPALRISLKSYFKPLNFSIIWEVMGIGIPASVESVLFTSGRLLT 293
Query: 350 IYFATSMGTNTVAAHQVMIQTYGMCSVWGEPLSQTA 385
F MGT+ +A + + + ++ G L +
Sbjct: 294 QMFVAGMGTSVIAGNFIAFSIAALINLPGSALGSAS 329
>TIGR_CMR|CHY_1592 [details] [associations]
symbol:CHY_1592 "MATE efflux family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006810
"transport" evidence=ISS] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016020 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0015238
GO:GO:0015297 eggNOG:COG0534 TIGRFAMs:TIGR00797 RefSeq:YP_360420.1
STRING:Q3ABR4 GeneID:3728224 KEGG:chy:CHY_1592 PATRIC:21276309
HOGENOM:HOG000056140 BioCyc:CHYD246194:GJCN-1591-MONOMER
Uniprot:Q3ABR4
Length = 442
Score = 129 (50.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 82/355 (23%), Positives = 148/355 (41%)
Query: 107 EIVMFTGPATGLWLCGPLMSLIDTAVIGQGSSVELAALGPGTVMCDYLTYVFMFLSIATS 166
EI+ PA + ++ ++DTA++G+ + +A + G + + T+ F+F +I T
Sbjct: 4 EIIKVALPAVLEMILHMVVGIVDTAMVGRLGATAVAGVSLGAQII-FSTF-FVFAAIGTG 61
Query: 167 N--MVATSLARQDKNEVQHQISVLLFVGLACGFLMLLFTRFFGSWALTAFTGPRNVHLVP 224
+ A +L + K EV+ S L + GFL L F + L A +NV LV
Sbjct: 62 GGALAAQALGAKKKEEVKKFFSYSLLLAFFAGFL-LFFLPYIVEIILPALKIDKNVALVT 120
Query: 225 AANTYVQ-IRSFAWPAVLVGLVAQSASLGMKDSLGPLKALAVASAINGIGD-VALCSFLG 282
+ Y++ I FA A+LV V + + PL V + +N D V + LG
Sbjct: 121 IS--YLKTIGKFAVFALLV-FVGNGLLRAIGQTRVPLYTAVVINCLNIFLDYVLIFGKLG 177
Query: 283 Y---GIAGAAWATMVSQVVSAYMM---IQSLNNKGYNAFSFSVPSTNELATILGLAGPVF 336
+ G GAA A+ +S + + + I + K F + + L I+ ++ P
Sbjct: 178 FPKLGPGGAALASGISLTLGSIIALGYIGLIEKKLSLKFQW-LEIRVYLKKIIQISIPAA 236
Query: 337 ITMISKVAFYSLIIYFATSMGTNTVAAHQVMIQTYGMCSVWGEPLSQTAQSFMPELIYGV 396
+ S ++ + +G + AA+++ I + + G L+ A SF YG
Sbjct: 237 LEEGSFSLGRVVVSFILVKLGAVSFAANEIAIYIESLAYMPGYGLAIAAYSFAARF-YGE 295
Query: 397 NRSLVKARMXXXXXXXXXXXXXXXXXXXXASVPWFFPNIFTSDKSVIQEMHKVLI 451
+ KA+ +P +FT D V++++ KV +
Sbjct: 296 G-NYQKAKSYIEKTLNLTILGMGLMGIIFFFLPQQLGLLFTKDVDVLEKI-KVCL 348
>TIGR_CMR|CPS_2915 [details] [associations]
symbol:CPS_2915 "multidrug resistance protein NorM"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006855 "drug
transmembrane transport" evidence=ISS] [GO:0016020 "membrane"
evidence=ISS] [GO:0042493 "response to drug" evidence=ISS]
InterPro:IPR002528 Pfam:PF01554 GO:GO:0016020 GO:GO:0015238
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0015297
eggNOG:COG0534 KO:K03327 TIGRFAMs:TIGR00797 HOGENOM:HOG000038538
OMA:ARTDIIV RefSeq:YP_269616.1 STRING:Q480A3 GeneID:3520976
KEGG:cps:CPS_2915 PATRIC:21468857
BioCyc:CPSY167879:GI48-2965-MONOMER Uniprot:Q480A3
Length = 472
Score = 127 (49.8 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 64/294 (21%), Positives = 122/294 (41%)
Query: 102 WSQMKEIVMFTGPATGLWLCGPLMSLIDTAVIGQGSSVELAALGPGTVMCDYLTYVFMFL 161
++ K ++ T P L LM +D + G+ S+ +LAA+ + L L
Sbjct: 7 FTHSKSLLKLTYPILIAQLIQNLMGFVDIVMAGRVSATDLAAVAVANSIWLPLILTIYGL 66
Query: 162 SIATSNMVATSLARQDKNEVQHQISVLLFVGLACGFLMLLFTRFFGSWALTAFTGPRNVH 221
+A S +V+ ++ +++ Q ++ L G ++L T N
Sbjct: 67 IMALSAIVSQLAGAKNYSKIVEQTYQTAWISLVLGLSLILLYYLLIPIVSPLVTLESN-- 124
Query: 222 LVPAANTYVQIRSFAWPAVLVGLVAQSASLGMKDSLGPLKALAVASAINGI--------G 273
L Y+ + P + LV ++ S G+ + P +++ + I G
Sbjct: 125 LEELMFDYLGFIVWGAPGFCLYLVLRNYSEGLSYTK-PTMIISIIGLLVNIPANYIFIYG 183
Query: 274 DVALCSF--LGYGIAGAA--WATMVSQVVSAYMMIQSLNNKGYNAFS-FSVPSTNELATI 328
+ + G G+A A W+ +S ++ + S K N FS F P E+ I
Sbjct: 184 KFGMPALGGAGCGVATALVYWSMFISMLIYCFY---SKVLKQANLFSAFYWPVLAEIKAI 240
Query: 329 LGLAGPVFITMISKVAFYSLIIYFATSMGTNTVAAHQVMIQTYGMCSVWGEPLS 382
LGL P+ ++++ +V+ ++++ G VA+HQV + G+ V+ PLS
Sbjct: 241 LGLGIPIALSLLFEVSLFAIVAIILVPFGAQVVASHQVALNFTGL--VFMVPLS 292
>UNIPROTKB|Q9KKW1 [details] [associations]
symbol:VC_A0989 "Putative uncharacterized protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016020
GO:GO:0015238 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0015297
TIGRFAMs:TIGR00797 PIR:G82392 RefSeq:NP_233373.1 DNASU:2612337
GeneID:2612337 KEGG:vch:VCA0989 PATRIC:20086500 OMA:KKEEFRQ
ProtClustDB:CLSK869860 Uniprot:Q9KKW1
Length = 444
Score = 116 (45.9 bits), Expect = 0.00094, P = 0.00094
Identities = 61/265 (23%), Positives = 111/265 (41%)
Query: 103 SQMKEIVMFTGPATGLWLCGPLMS--LIDTAVIGQGSSVELAALGPGTVMCDYLTYVFMF 160
S K++ T P L+ LMS L+D+A IGQ + LAA G + + + +
Sbjct: 9 SLAKQLFQMTWPM--LFGVLSLMSFQLVDSAFIGQLGVLPLAAQGFTMPIQMVIIGIQVG 66
Query: 161 LSIATSNMVATSLARQDKNEVQHQISVLLFVGLACGFLMLLFTRFFGSWALTAFTG-PRN 219
L IAT+ +++ ++ K E Q+ L+ V G ++ + L G P
Sbjct: 67 LGIATTAVISRAIGA-GKTEYAKQLGGLVIVIGGIGVALIALVLYLLRQPLLGLLGAPET 125
Query: 220 VHLVPAANTYVQIRSFAWPAVLVGLVAQSASLGMKDSLGPLKALAVASAINGIGDVALCS 279
V + + ++ + AW ++ S ++L P + V S +N I D
Sbjct: 126 VFAI-IDHYWLWWLASAWTGAMLYFY-YSVCRANGNTLLPGTLMMVTSVLNLILDPIFIF 183
Query: 280 FLGYGIAGAAWATMVSQVVSAYMMIQSLNNKGYNAFSFSVPSTNELATILG-LAGPVFIT 338
GI GAA AT+++ V ++ + + + ++ + + ++ T LG + GP ++
Sbjct: 184 TFDLGIDGAAIATIIAFGVGIAIVAPKVAQRQWTSYQWQDLNISQSLTALGHIMGPAMLS 243
Query: 339 MISKVAFYSLIIYFATSMGTNTVAA 363
+ S GT VAA
Sbjct: 244 QLLPPLSSMFATKLLASFGTAAVAA 268
>TIGR_CMR|VC_A0989 [details] [associations]
symbol:VC_A0989 "conserved hypothetical protein"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002528 Pfam:PF01554 GO:GO:0016020 GO:GO:0015238
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0015297
TIGRFAMs:TIGR00797 PIR:G82392 RefSeq:NP_233373.1 DNASU:2612337
GeneID:2612337 KEGG:vch:VCA0989 PATRIC:20086500 OMA:KKEEFRQ
ProtClustDB:CLSK869860 Uniprot:Q9KKW1
Length = 444
Score = 116 (45.9 bits), Expect = 0.00094, P = 0.00094
Identities = 61/265 (23%), Positives = 111/265 (41%)
Query: 103 SQMKEIVMFTGPATGLWLCGPLMS--LIDTAVIGQGSSVELAALGPGTVMCDYLTYVFMF 160
S K++ T P L+ LMS L+D+A IGQ + LAA G + + + +
Sbjct: 9 SLAKQLFQMTWPM--LFGVLSLMSFQLVDSAFIGQLGVLPLAAQGFTMPIQMVIIGIQVG 66
Query: 161 LSIATSNMVATSLARQDKNEVQHQISVLLFVGLACGFLMLLFTRFFGSWALTAFTG-PRN 219
L IAT+ +++ ++ K E Q+ L+ V G ++ + L G P
Sbjct: 67 LGIATTAVISRAIGA-GKTEYAKQLGGLVIVIGGIGVALIALVLYLLRQPLLGLLGAPET 125
Query: 220 VHLVPAANTYVQIRSFAWPAVLVGLVAQSASLGMKDSLGPLKALAVASAINGIGDVALCS 279
V + + ++ + AW ++ S ++L P + V S +N I D
Sbjct: 126 VFAI-IDHYWLWWLASAWTGAMLYFY-YSVCRANGNTLLPGTLMMVTSVLNLILDPIFIF 183
Query: 280 FLGYGIAGAAWATMVSQVVSAYMMIQSLNNKGYNAFSFSVPSTNELATILG-LAGPVFIT 338
GI GAA AT+++ V ++ + + + ++ + + ++ T LG + GP ++
Sbjct: 184 TFDLGIDGAAIATIIAFGVGIAIVAPKVAQRQWTSYQWQDLNISQSLTALGHIMGPAMLS 243
Query: 339 MISKVAFYSLIIYFATSMGTNTVAA 363
+ S GT VAA
Sbjct: 244 QLLPPLSSMFATKLLASFGTAAVAA 268
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.135 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 482 448 0.00091 118 3 11 22 0.47 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 613 (65 KB)
Total size of DFA: 249 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.32u 0.13s 33.45t Elapsed: 00:00:02
Total cpu time: 33.33u 0.13s 33.46t Elapsed: 00:00:02
Start: Sat May 11 00:22:54 2013 End: Sat May 11 00:22:56 2013