Query 011592
Match_columns 482
No_of_seqs 269 out of 829
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 03:04:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011592.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011592hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2458 Endoplasmic reticulum 100.0 6E-127 1E-131 978.5 33.0 430 43-480 94-528 (528)
2 PF05686 Glyco_transf_90: Glyc 100.0 2E-115 5E-120 911.6 34.3 395 76-472 1-395 (395)
3 smart00672 CAP10 Putative lipo 100.0 7.5E-69 1.6E-73 531.3 20.4 248 152-402 1-256 (256)
4 PF13524 Glyco_trans_1_2: Glyc 97.6 0.00024 5.3E-09 58.9 7.3 82 300-388 9-90 (92)
5 PRK10307 putative glycosyl tra 62.9 27 0.00059 36.4 7.9 83 303-393 321-406 (412)
6 cd03801 GT1_YqgM_like This fam 58.0 40 0.00087 32.5 7.7 85 301-390 287-371 (374)
7 COG4641 Uncharacterized protei 54.3 49 0.0011 35.1 7.8 70 302-378 276-345 (373)
8 PRK15427 colanic acid biosynth 52.5 54 0.0012 34.7 8.0 87 302-393 317-404 (406)
9 cd04962 GT1_like_5 This family 50.8 70 0.0015 32.1 8.3 86 303-393 284-369 (371)
10 PF07436 Curto_V3: Curtovirus 49.9 8.1 0.00018 31.5 1.0 24 3-26 10-33 (87)
11 cd05844 GT1_like_7 Glycosyltra 46.9 53 0.0012 32.9 6.7 82 302-388 283-364 (367)
12 TIGR03087 stp1 sugar transfera 46.4 68 0.0015 33.3 7.6 83 301-392 310-394 (397)
13 cd03818 GT1_ExpC_like This fam 46.3 55 0.0012 34.0 6.9 75 305-384 316-390 (396)
14 cd03808 GT1_cap1E_like This fa 46.2 78 0.0017 30.6 7.6 81 301-386 275-355 (359)
15 TIGR03088 stp2 sugar transfera 44.3 1.1E+02 0.0024 31.1 8.6 85 302-392 285-370 (374)
16 cd03807 GT1_WbnK_like This fam 43.9 1.1E+02 0.0024 29.6 8.3 79 301-387 280-359 (365)
17 cd03822 GT1_ecORF704_like This 43.7 1E+02 0.0022 30.4 8.0 79 301-386 281-359 (366)
18 cd03794 GT1_wbuB_like This fam 43.4 61 0.0013 31.8 6.4 81 301-386 311-391 (394)
19 TIGR02149 glgA_Coryne glycogen 43.3 84 0.0018 32.0 7.6 78 307-388 298-380 (388)
20 TIGR02472 sucr_P_syn_N sucrose 42.9 58 0.0013 34.6 6.5 80 305-392 356-438 (439)
21 cd03795 GT1_like_4 This family 41.3 60 0.0013 32.2 6.0 78 302-384 278-356 (357)
22 cd03817 GT1_UGDG_like This fam 40.1 97 0.0021 30.3 7.2 73 301-379 290-362 (374)
23 PF00534 Glycos_transf_1: Glyc 39.9 51 0.0011 29.4 4.8 69 301-374 104-172 (172)
24 cd03825 GT1_wcfI_like This fam 39.0 1.2E+02 0.0025 30.1 7.7 80 302-387 277-357 (365)
25 PRK05749 3-deoxy-D-manno-octul 36.1 60 0.0013 34.2 5.3 68 306-378 337-406 (425)
26 cd04955 GT1_like_6 This family 34.6 1E+02 0.0023 30.6 6.6 80 302-390 281-360 (363)
27 cd03799 GT1_amsK_like This is 34.3 99 0.0021 30.5 6.3 78 302-384 274-351 (355)
28 PRK15484 lipopolysaccharide 1, 33.6 1.2E+02 0.0025 31.6 7.0 82 306-395 294-378 (380)
29 cd03792 GT1_Trehalose_phosphor 33.1 1.5E+02 0.0033 30.2 7.6 82 304-392 288-369 (372)
30 cd03805 GT1_ALG2_like This fam 32.1 84 0.0018 32.0 5.5 74 306-385 316-389 (392)
31 PF03016 Exostosin: Exostosin 26.4 1.2E+02 0.0027 29.9 5.4 104 227-338 174-284 (302)
32 cd03821 GT1_Bme6_like This fam 22.8 3.4E+02 0.0073 26.3 7.7 77 301-385 293-370 (375)
33 cd03800 GT1_Sucrose_synthase T 22.1 2.2E+02 0.0048 28.7 6.4 77 305-386 318-394 (398)
34 cd03823 GT1_ExpE7_like This fa 21.2 3E+02 0.0065 26.7 7.0 72 301-377 275-346 (359)
No 1
>KOG2458 consensus Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif [General function prediction only]
Probab=100.00 E-value=5.6e-127 Score=978.53 Aligned_cols=430 Identities=60% Similarity=1.158 Sum_probs=408.7
Q ss_pred cccccC---C-CCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCcchhhHHhcccccccCCCCHHHHHHHhccCeEEEEEE
Q 011592 43 TPLNCV---K-NQTQTCPTNYPKTSQTQESISDYSIPPTSTCPDYFRWIHEDLSPWKVTGITRDMLERANQTAHFRLILV 118 (482)
Q Consensus 43 ~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cp~~f~~I~~DL~pw~~~GIt~~~le~a~~~~~~rv~I~ 118 (482)
+.|.|. + +.+.+||++...+.. ....++...+..+|||||+|||+||.||+++|||++++++|++.++||++|+
T Consensus 94 ~~l~cs~~s~~~~~~~~p~~~~~~s~--~~~~~~~~~~~~tCPDyfrWIheDL~Pw~etgItre~~erak~~a~fr~vI~ 171 (528)
T KOG2458|consen 94 YRLYCSLFSGLKREVLCPSSHVSKSP--YILKNPVYHESCTCPDYFRWIHEDLCPWRETGITREMAERAKRKAHFRLVIK 171 (528)
T ss_pred hhhhhhhhhcccccccccccccccCc--cccCCCCCCCCCCCCcHHHHHHHhcCccccccchHHHhhhhhcccceeeeee
Confidence 447882 2 667899987443311 1123356677889999999999999999999999999999999999999999
Q ss_pred CCEEEEEcccccccchhHHHHHHHHHHHHhcCCCCCCeEEEeeCCCCccccccCCCCCCCCCCCCeeEeccCCCCCcccc
Q 011592 119 NNKVYIHKYKQSIQTRDVFTIWGILQLLRKYPGRLPDLELMFDCDDRPVIRSRDYSGPNNKGPPPLFRYSGDRWTMDIVF 198 (482)
Q Consensus 119 nG~lyv~~~~~~~~tR~~~tl~~il~ll~~~~~~LPDvef~~n~~D~P~v~~~~~~g~~~~~~~PlFs~ck~~~~~DIl~ 198 (482)
+|++||+.|++++|+|++||+|||+|||++|||+|||+||+|||+|+|.|.+.+|+| + .+|+|||+||++.++.||+|
T Consensus 172 ~g~~yv~~Y~ks~qtrd~ft~wgilqLlr~ypgklPDlElmf~~~D~P~v~~~~~~~-~-~~ppPlF~yCg~~~s~DIVf 249 (528)
T KOG2458|consen 172 EGRLYVENYRKSIQTRDVFTIWGILQLLRTYPGKLPDLELMFNCGDWPLVRKKDFQG-T-PPPPPLFSYCGSSESLDIVF 249 (528)
T ss_pred cCceehhhhhhhhcccchHHHHHHHHHHHhcCCCCCCceeeeecCCccccchhhccC-C-CCCCCeEeecCCcccccccc
Confidence 999999999999999999999999999999999999999999999999999999987 3 38999999999999999999
Q ss_pred CCccccccccccccchHHHHHHHHccCCCCCCCCcCCceeeeeCCCCc-hhHHHHHhccccCCCCcccceehhhhhhhhc
Q 011592 199 PDWSFWGWAEINIKPWESLLRELKEGNNGRNWIDREPYAYWKGNPFVA-ETRRDLLTCNLSDKHDWNARLYVQDWILESK 277 (482)
Q Consensus 199 Pd~~fwgwpe~~i~~w~~~~~~l~~~~~~~pW~~K~~kafWRG~~t~~-~~R~~Lv~~~~s~~~~~~a~i~~~~w~~e~~ 277 (482)
|||+||||+|.||++|+.+..++.||+...+|.+|.++|||||++++. +.|+.|+.||++.-.+|+++++.|+|.+|++
T Consensus 250 Pdwsfwgw~e~nik~w~~~~~~~~egn~~~~W~~r~~yAywrGnp~v~e~~rl~ll~cn~s~~~d~~~~~y~qdw~~E~~ 329 (528)
T KOG2458|consen 250 PDWSFWGWAEVNIKPWEKLLEDIVEGNKRPKWKNKNPYAYWRGNPSVAERLRLDLLSCNNSELVDANATLYFQDWSKESK 329 (528)
T ss_pred cCccccCChhhcccccchHHHHHHhhccCCCcccCCceeEecCCCCccccchhhhhhcCCchhhchhhhhHHHhhhhhhh
Confidence 999999999999999999999999999999999999999999999998 8999999999888889999999999999999
Q ss_pred cCCccCChhhhccccEEEeecccccccchHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcc
Q 011592 278 RGFQQSNLASQCAHRYKIYIEGYAWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGN 357 (482)
Q Consensus 278 ~g~~~v~l~~~c~yKYli~idG~a~S~RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~ 357 (482)
.||+.+++++||+|||+|+|||.+||+|+||||+||||+|++++.|+|||++.|+||+|||||+.+ |+||++||+|++
T Consensus 330 ~G~k~s~l~dqc~hrYkIyiEG~awsvs~kYilacDS~tL~v~p~YydfF~r~l~P~~HYwPIk~~--c~slkfaV~Wgn 407 (528)
T KOG2458|consen 330 LGFKQSNLFDQCKHRYKIYIEGTAWSVSEKYILACDSMTLKVKPEYYDFFYRGLQPWKHYWPIKSN--CRSLKFAVDWGN 407 (528)
T ss_pred ccccccchhhhcceeeEEEEeeeeeeeecceeeecceeEEeecchHHHHHhhcccchhcccccccc--hhHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999999999999999998 899999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhhcCCCCCCCCCeeeccccceecCCCchhhhhhhhcccCC
Q 011592 358 THKQKQAQEIGRAASNFIQEELKMEYVYDYMFHLLNEYAKLLKFKPVAPDGAVEVCSETMACNANGSHKKFMMESLVKGP 437 (482)
Q Consensus 358 ~h~~~~Aq~IA~~g~~fa~~~L~~~~v~~Y~~~LL~eYarL~~~~P~~~~~~~e~~~e~~~c~~~g~~~~~~~~~~v~~~ 437 (482)
+|+++ ||.||++|++|+++.|.|++|||||||||+|||+|++|||++|.||+|||+|+|+|+++|++|+||+||+|+ |
T Consensus 408 ~h~~~-Aq~Igk~gs~f~r~~L~m~~vYdYmfhllqeYakL~k~kpevp~~a~evc~~~m~cp~~g~~r~~m~~slv~-p 485 (528)
T KOG2458|consen 408 NHDEE-AQKIGKEGSEFARKNLKMDYVYDYMFHLLQEYAKLQKFKPEVPEGATEVCPETMACPEDGRERKFMDESLVM-P 485 (528)
T ss_pred cChHH-HHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHhhcCCcCCCCccccCchhccCCccchhhhhhhhcccc-c
Confidence 99999 999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHhHHHHHHHHHHHHHHHhhh
Q 011592 438 SITNPCTLPPPYEPKVLGAFYRRKLNAILQVQKWEDRYWESLK 480 (482)
Q Consensus 438 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (482)
|++.||.|||||++.+|++|++||+++++|||+||++||++|+
T Consensus 486 s~~~pC~~p~p~~~~~l~~~~~~k~~~~~~ve~we~~y~~~~~ 528 (528)
T KOG2458|consen 486 SDTAPCEMPPPYDPNELKEFLEKKESTTRQVEKWENKYWQKQN 528 (528)
T ss_pred cccCcccCCCCCCcHHHHHHHHHHHhHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999874
No 2
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=100.00 E-value=2.4e-115 Score=911.61 Aligned_cols=395 Identities=53% Similarity=1.022 Sum_probs=381.2
Q ss_pred CCCCCCcchhhHHhcccccccCCCCHHHHHHHhccCeEEEEEECCEEEEEcccccccchhHHHHHHHHHHHHhcCCCCCC
Q 011592 76 PTSTCPDYFRWIHEDLSPWKVTGITRDMLERANQTAHFRLILVNNKVYIHKYKQSIQTRDVFTIWGILQLLRKYPGRLPD 155 (482)
Q Consensus 76 ~~~~Cp~~f~~I~~DL~pw~~~GIt~~~le~a~~~~~~rv~I~nG~lyv~~~~~~~~tR~~~tl~~il~ll~~~~~~LPD 155 (482)
++.+||+||+||++||+||+++|||+++|+++++.+++|++|+||+|||+.+++++++|++|++|+|++|+++++++|||
T Consensus 1 ~~~~cp~~f~~I~~dl~~w~~~gIt~~~l~~~~~~~~~r~~I~~g~lYv~~~~~~~~tR~~~t~~~l~~ll~~~p~~lPD 80 (395)
T PF05686_consen 1 SNSQCPDYFRQIHRDLAPWRETGITREMLDRARRRAMFRYVIKDGRLYVESYREMFQTRDMFTLWGLLQLLRRYPGRLPD 80 (395)
T ss_pred CCCCCCccHHHHHHHHHHhhcCCCCHHHHHHHHhcCceEEEEECCEEEEEecccccchhHHHHHHHHHHHHHhCcCCCCC
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeCCCCccccccCCCCCCCCCCCCeeEeccCCCCCccccCCccccccccccccchHHHHHHHHccCCCCCCCCcCC
Q 011592 156 LELMFDCDDRPVIRSRDYSGPNNKGPPPLFRYSGDRWTMDIVFPDWSFWGWAEINIKPWESLLRELKEGNNGRNWIDREP 235 (482)
Q Consensus 156 vef~~n~~D~P~v~~~~~~g~~~~~~~PlFs~ck~~~~~DIl~Pd~~fwgwpe~~i~~w~~~~~~l~~~~~~~pW~~K~~ 235 (482)
|||+||++|+|.+.+..+.|.. .+++||||+||+.++.|||||||+|||||+++|++|+..+..+.+++..+||++|++
T Consensus 81 ~Ef~~n~~D~P~~~~~~~~~~~-~~~~Pifs~~~~~~~~DIl~Pd~~fwgw~e~~i~~w~~~~~~i~~~~~~~pW~~K~p 159 (395)
T PF05686_consen 81 VEFMFNCDDWPVVRKDDYQGPS-APPPPIFSYCKSSDTADILFPDFSFWGWPEINIGPWDEDRKDIKEGNERVPWEDKKP 159 (395)
T ss_pred eeEEeECCCCccccccccCCCC-cchhhheeeccccCcCccccCCccccccccccCCchHHHhhhhhccccCCChhhccc
Confidence 9999999999999887765543 379999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeCCCCchhHHHHHhccccCCCCcccceehhhhhhhhccCCccCChhhhccccEEEeecccccccchHHHHhcCCc
Q 011592 236 YAYWKGNPFVAETRRDLLTCNLSDKHDWNARLYVQDWILESKRGFQQSNLASQCAHRYKIYIEGYAWSVSEKYILACDSM 315 (482)
Q Consensus 236 kafWRG~~t~~~~R~~Lv~~~~s~~~~~~a~i~~~~w~~e~~~g~~~v~l~~~c~yKYli~idG~a~S~RlkyLL~~~Sv 315 (482)
+|||||+++++..|++|+.|+++++.+|+|+++.++|..+...+++.+++++||+|||+||+||++||+||||||+||||
T Consensus 160 ~afWRG~~~~~~~R~~L~~~~~~~~~~~~a~i~~~d~~~~~~~~~~~~~l~~~~~yKYli~idG~~~S~RlkylL~c~Sv 239 (395)
T PF05686_consen 160 KAFWRGSPTVAETRQRLVRCSRSHPDLWDARITKQDWDKEYKPGFKHVPLEDQCKYKYLIYIDGNAWSGRLKYLLACNSV 239 (395)
T ss_pred ceEECCCcCCCcchhHHHHHhccCCccceeeechhhhhhhccccccccCHHHHhhhheeecCCCceeehhHHHHHcCCce
Confidence 99999999988889999999988888999999999998777788889999999999999999999999999999999999
Q ss_pred ccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHH
Q 011592 316 TLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELKMEYVYDYMFHLLNEY 395 (482)
Q Consensus 316 Vlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~~~~v~~Y~~~LL~eY 395 (482)
||++++.|+|||+++|+||+|||||+.+..|+||.++|+|+++||++ |++||++|++|++++|++++++|||++||+||
T Consensus 240 Vl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v~w~~~~~~~-A~~IA~~g~~f~~~~L~~~~~~~Y~~~LL~eY 318 (395)
T PF05686_consen 240 VLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKVEWLNAHDDE-AQRIAENGQRFAREYLTMEDVYCYWRRLLLEY 318 (395)
T ss_pred EEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHhhhcccChHH-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999954579999999999999999 99999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCeeeccccceecCCCchhhhhhhhcccCCCCCCCCCCCCCCChHHHHHHHHHHhHHHHHHHHHH
Q 011592 396 AKLLKFKPVAPDGAVEVCSETMACNANGSHKKFMMESLVKGPSITNPCTLPPPYEPKVLGAFYRRKLNAILQVQKWE 472 (482)
Q Consensus 396 arL~~~~P~~~~~~~e~~~e~~~c~~~g~~~~~~~~~~v~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (482)
|+|++|+|+++++++|||+|+|+|+++|.+++||++|+|++|+++.||+|||||+|++|++|++||+|+++|||+||
T Consensus 319 a~l~~~~p~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (395)
T PF05686_consen 319 AKLLRFKPTVPPGAEEVCPESMACPAEGRERKFMMESMVKSPSDTDPCTMPPPYDPEELKEFLERKENVIRQVEKWE 395 (395)
T ss_pred HHHhCCCCcCCCCceEechhhcCCCcccchhhHHHHhhccCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997
No 3
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=100.00 E-value=7.5e-69 Score=531.29 Aligned_cols=248 Identities=58% Similarity=1.086 Sum_probs=229.9
Q ss_pred CCCCeEEEeeCCCCccccccCCCCCCCCCCCCeeEeccCCCCCccccCCcccc-ccccccccchHHHHHHHHccCCCCCC
Q 011592 152 RLPDLELMFDCDDRPVIRSRDYSGPNNKGPPPLFRYSGDRWTMDIVFPDWSFW-GWAEINIKPWESLLRELKEGNNGRNW 230 (482)
Q Consensus 152 ~LPDvef~~n~~D~P~v~~~~~~g~~~~~~~PlFs~ck~~~~~DIl~Pd~~fw-gwpe~~i~~w~~~~~~l~~~~~~~pW 230 (482)
+|||+||+||++|+|.+.+..+.+.+...++||||+||..++.|||||+|+|| |||+.++++|+..+.++.+++..+||
T Consensus 1 ~lPD~ef~~n~~D~p~~~~~~~~~~~~~~~~Pifs~~k~~~~~DIl~P~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~pW 80 (256)
T smart00672 1 RVPDLELMFNCRDWPLINKKSFASYNQHAPPPLFSYCGSDEYLDIVFPDWSFWAGWPEVNGRPWDKDLMELEEGNKRTKW 80 (256)
T ss_pred CCCCeeeeeeCCCccccccCCCCCcccCCCCCeEEecCCCCCCceEecCHHHhCCCccccCcchHHHHHHHHhhhcCCCc
Confidence 58999999999999998876544333356899999999999999999999999 99999999999999999988999999
Q ss_pred CCcCCceeeeeCCCCchhHHHHHhccccCCCCcccceehhhhh-----hhhccCCccCChhhhccccEEEeecccccccc
Q 011592 231 IDREPYAYWKGNPFVAETRRDLLTCNLSDKHDWNARLYVQDWI-----LESKRGFQQSNLASQCAHRYKIYIEGYAWSVS 305 (482)
Q Consensus 231 ~~K~~kafWRG~~t~~~~R~~Lv~~~~s~~~~~~a~i~~~~w~-----~e~~~g~~~v~l~~~c~yKYli~idG~a~S~R 305 (482)
++|+++|||||+++++.+|++|+.+++.++.+|||+++.++|. .+...+++.+++++||+|||+|++||++||+|
T Consensus 81 ~~K~~~a~WRG~~~~~~~R~~Lv~~~~~~p~~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yKyli~~dG~~~S~r 160 (256)
T smart00672 81 SDKNAYAYWRGNPTVASERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEGVAWSVR 160 (256)
T ss_pred cccCcCccccCCCCCCcchHHHHHHhcCCcccceeEEEEecCCCCChHHhcccCcCCCCHHHHhhcceEEecCCccchhh
Confidence 9999999999999987799999999988888899999987774 23345667799999999999999999999999
Q ss_pred hHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCccc--HHHHHHhcccccHHHHHHHHHHHHHHHHHhhChhH
Q 011592 306 EKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKS--IKFAVDWGNTHKQKQAQEIGRAASNFIQEELKMEY 383 (482)
Q Consensus 306 lkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~d--L~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~~~~ 383 (482)
|+++|+||||||++++.|+|||+++|+||+|||||+.|+ +| |+++|+|+++||++ ||+||++|++|++++|++++
T Consensus 161 l~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYvPv~~d~--sd~~l~~~i~~~~~~~~~-a~~Ia~~~~~~~~~~L~~~~ 237 (256)
T smart00672 161 LKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDL--SCRELKEAVDWGNEHDKK-AQEIGKRGSEFIQQNLSMED 237 (256)
T ss_pred HHHHHhcCceEEEeCCchhHHHHhcccCccceEEeeCCC--chhhHHHHHHHHHhCHHH-HHHHHHHHHHHHHHHcCHHH
Confidence 999999999999999999999999999999999999998 66 99999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCC
Q 011592 384 VYDYMFHLLNEYAKLLKFK 402 (482)
Q Consensus 384 v~~Y~~~LL~eYarL~~~~ 402 (482)
++|||++||+|||+|++|+
T Consensus 238 ~~~Y~~~ll~eya~l~~~~ 256 (256)
T smart00672 238 VYDYMFHLLQEYAKLLKYK 256 (256)
T ss_pred HHHHHHHHHHHHHHHhccC
Confidence 9999999999999999986
No 4
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=97.58 E-value=0.00024 Score=58.87 Aligned_cols=82 Identities=7% Similarity=0.043 Sum_probs=69.3
Q ss_pred cccccchHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhh
Q 011592 300 YAWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEEL 379 (482)
Q Consensus 300 ~a~S~RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L 379 (482)
.+.+.|+--.|+||++||...+ .-+...+.+..|++-++ +. +++.++++++.+||++ .++||++|++++++..
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~---~~~~~~~~~~~~~~~~~-~~--~el~~~i~~ll~~~~~-~~~ia~~a~~~v~~~~ 81 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS---PGLREIFEDGEHIITYN-DP--EELAEKIEYLLENPEE-RRRIAKNARERVLKRH 81 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh---HHHHHHcCCCCeEEEEC-CH--HHHHHHHHHHHCCHHH-HHHHHHHHHHHHHHhC
Confidence 4567788899999999998765 44455588899999998 44 8999999999999999 9999999999999888
Q ss_pred ChhHHHHHH
Q 011592 380 KMEYVYDYM 388 (482)
Q Consensus 380 ~~~~v~~Y~ 388 (482)
+-+.+..++
T Consensus 82 t~~~~~~~i 90 (92)
T PF13524_consen 82 TWEHRAEQI 90 (92)
T ss_pred CHHHHHHHH
Confidence 887776654
No 5
>PRK10307 putative glycosyl transferase; Provisional
Probab=62.90 E-value=27 Score=36.42 Aligned_cols=83 Identities=10% Similarity=0.041 Sum_probs=56.8
Q ss_pred ccchHHHHhcCCcccccCcc---hhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhh
Q 011592 303 SVSEKYILACDSMTLLVKPY---FHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEEL 379 (482)
Q Consensus 303 S~RlkyLL~~~SvVlk~~s~---~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L 379 (482)
+..+--.|+||-.|+..... ..|-.. .-+. .++ ..| .++|.+++..+.+++++ .++++++|++++++.+
T Consensus 321 p~kl~eama~G~PVi~s~~~g~~~~~~i~---~~G~-~~~-~~d--~~~la~~i~~l~~~~~~-~~~~~~~a~~~~~~~f 392 (412)
T PRK10307 321 PSKLTNMLASGRNVVATAEPGTELGQLVE---GIGV-CVE-PES--VEALVAAIAALARQALL-RPKLGTVAREYAERTL 392 (412)
T ss_pred cHHHHHHHHcCCCEEEEeCCCchHHHHHh---CCcE-EeC-CCC--HHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHHc
Confidence 33444558999888776422 222221 2222 122 123 37899999999899999 9999999999999999
Q ss_pred ChhHHHHHHHHHHH
Q 011592 380 KMEYVYDYMFHLLN 393 (482)
Q Consensus 380 ~~~~v~~Y~~~LL~ 393 (482)
+.+.+..-+..++.
T Consensus 393 s~~~~~~~~~~~~~ 406 (412)
T PRK10307 393 DKENVLRQFIADIR 406 (412)
T ss_pred CHHHHHHHHHHHHH
Confidence 99888776655554
No 6
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=58.02 E-value=40 Score=32.54 Aligned_cols=85 Identities=9% Similarity=-0.026 Sum_probs=58.7
Q ss_pred ccccchHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhC
Q 011592 301 AWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELK 380 (482)
Q Consensus 301 a~S~RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~ 380 (482)
+++..+---|+||-.|+.... ..+.+.+....+-+-+..+. .+++.+++..+.++++. .+++++++++.+.+.++
T Consensus 287 ~~~~~~~Ea~~~g~pvI~~~~---~~~~~~~~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~ 361 (374)
T cd03801 287 GFGLVLLEAMAAGLPVVASDV---GGIPEVVEDGETGLLVPPGD-PEALAEAILRLLDDPEL-RRRLGEAARERVAERFS 361 (374)
T ss_pred cccchHHHHHHcCCcEEEeCC---CChhHHhcCCcceEEeCCCC-HHHHHHHHHHHHcChHH-HHHHHHHHHHHHHHhcC
Confidence 556667777889998887663 22333343333433333331 37899999998889998 99999999988888888
Q ss_pred hhHHHHHHHH
Q 011592 381 MEYVYDYMFH 390 (482)
Q Consensus 381 ~~~v~~Y~~~ 390 (482)
.+.+..=+..
T Consensus 362 ~~~~~~~~~~ 371 (374)
T cd03801 362 WDRVAARTEE 371 (374)
T ss_pred HHHHHHHHHH
Confidence 8876654433
No 7
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.29 E-value=49 Score=35.10 Aligned_cols=70 Identities=13% Similarity=0.185 Sum_probs=55.2
Q ss_pred cccchHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHh
Q 011592 302 WSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEE 378 (482)
Q Consensus 302 ~S~RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~ 378 (482)
.+-|.--+++|+-..+ |.|.+-....+.|+.-.+-- .|. .|+.++++++.+|+++ +++||+.|-+=+...
T Consensus 276 ~~~RvFeiagc~~~li---T~~~~~~e~~f~pgk~~iv~-~d~--kdl~~~~~yll~h~~e-rkeiae~~ye~V~~~ 345 (373)
T COG4641 276 PTNRVFEIAGCGGFLI---TDYWKDLEKFFKPGKDIIVY-QDS--KDLKEKLKYLLNHPDE-RKEIAECAYERVLAR 345 (373)
T ss_pred chhhHHHHhhcCCccc---cccHHHHHHhcCCchheEEe-cCH--HHHHHHHHHHhcCcch-HHHHHHhhHHHHHHh
Confidence 4678888999998433 35777777778888877744 444 8999999999999999 999999999766543
No 8
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=52.51 E-value=54 Score=34.67 Aligned_cols=87 Identities=8% Similarity=0.083 Sum_probs=61.1
Q ss_pred cccchHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhccc-ccHHHHHHHHHHHHHHHHHhhC
Q 011592 302 WSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNT-HKQKQAQEIGRAASNFIQEELK 380 (482)
Q Consensus 302 ~S~RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~-h~~~~Aq~IA~~g~~fa~~~L~ 380 (482)
+..-+.--|+||-.|+..... -..+.+..+.+-+=+..+. .++|.++|..+.+ ++++ .++++++|++++.+.++
T Consensus 317 ~p~~llEAma~G~PVI~t~~~---g~~E~v~~~~~G~lv~~~d-~~~la~ai~~l~~~d~~~-~~~~~~~ar~~v~~~f~ 391 (406)
T PRK15427 317 IPVALMEAMAVGIPVVSTLHS---GIPELVEADKSGWLVPEND-AQALAQRLAAFSQLDTDE-LAPVVKRAREKVETDFN 391 (406)
T ss_pred ccHHHHHHHhCCCCEEEeCCC---CchhhhcCCCceEEeCCCC-HHHHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHhcC
Confidence 455567789999888765421 2233445555433343322 3789999998888 8898 99999999999999999
Q ss_pred hhHHHHHHHHHHH
Q 011592 381 MEYVYDYMFHLLN 393 (482)
Q Consensus 381 ~~~v~~Y~~~LL~ 393 (482)
.+.+..=+..++.
T Consensus 392 ~~~~~~~l~~~~~ 404 (406)
T PRK15427 392 QQVINRELASLLQ 404 (406)
T ss_pred HHHHHHHHHHHHh
Confidence 8877766655554
No 9
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=50.75 E-value=70 Score=32.13 Aligned_cols=86 Identities=14% Similarity=0.010 Sum_probs=59.0
Q ss_pred ccchHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhChh
Q 011592 303 SVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELKME 382 (482)
Q Consensus 303 S~RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~~~ 382 (482)
+..+---|+||-.|+..+.. -..+.+..+..-+=++.+. .+++..++..+.+++++ .++++++|++++.+..+.+
T Consensus 284 ~~~~~EAma~g~PvI~s~~~---~~~e~i~~~~~G~~~~~~~-~~~l~~~i~~l~~~~~~-~~~~~~~~~~~~~~~fs~~ 358 (371)
T cd04962 284 GLAALEAMACGVPVVASNAG---GIPEVVKHGETGFLVDVGD-VEAMAEYALSLLEDDEL-WQEFSRAARNRAAERFDSE 358 (371)
T ss_pred ccHHHHHHHcCCCEEEeCCC---CchhhhcCCCceEEcCCCC-HHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHhCCHH
Confidence 33455668888877765432 1334455544433344322 37888889888888988 8999999999988889988
Q ss_pred HHHHHHHHHHH
Q 011592 383 YVYDYMFHLLN 393 (482)
Q Consensus 383 ~v~~Y~~~LL~ 393 (482)
.+..-+..++.
T Consensus 359 ~~~~~~~~~y~ 369 (371)
T cd04962 359 RIVPQYEALYR 369 (371)
T ss_pred HHHHHHHHHHH
Confidence 87766665553
No 10
>PF07436 Curto_V3: Curtovirus V3 protein; InterPro: IPR009997 This family consists of several Curtovirus V3 proteins of around 90 residues in length. The function of this family is unknown.
Probab=49.88 E-value=8.1 Score=31.55 Aligned_cols=24 Identities=33% Similarity=0.448 Sum_probs=19.9
Q ss_pred cchhhhhhhccCcceeeeecCCee
Q 011592 3 ELFAFSIILQSNFSVHNISRNKTV 26 (482)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~ 26 (482)
-||.|||||||+-.+-+.|-.+++
T Consensus 10 LlFifsillQsgtNfYGTfqSgsi 33 (87)
T PF07436_consen 10 LLFIFSILLQSGTNFYGTFQSGSI 33 (87)
T ss_pred HHHHHHHHHhcCCceeeeeccchH
Confidence 379999999999888888876653
No 11
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=46.90 E-value=53 Score=32.93 Aligned_cols=82 Identities=9% Similarity=-0.023 Sum_probs=56.6
Q ss_pred cccchHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhCh
Q 011592 302 WSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELKM 381 (482)
Q Consensus 302 ~S~RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~~ 381 (482)
++..+---|+||-.|+..+.. -..+.+.....-+=+..+. .++|.+++..+.++++. .++++++|++++++.++.
T Consensus 283 ~~~~~~EA~a~G~PvI~s~~~---~~~e~i~~~~~g~~~~~~d-~~~l~~~i~~l~~~~~~-~~~~~~~a~~~~~~~~s~ 357 (367)
T cd05844 283 LPVVLLEAQASGVPVVATRHG---GIPEAVEDGETGLLVPEGD-VAALAAALGRLLADPDL-RARMGAAGRRRVEERFDL 357 (367)
T ss_pred CchHHHHHHHcCCCEEEeCCC---CchhheecCCeeEEECCCC-HHHHHHHHHHHHcCHHH-HHHHHHHHHHHHHHHCCH
Confidence 455666778999888865432 1233344444433343322 37888999888888888 999999999999999988
Q ss_pred hHHHHHH
Q 011592 382 EYVYDYM 388 (482)
Q Consensus 382 ~~v~~Y~ 388 (482)
+.+..-+
T Consensus 358 ~~~~~~l 364 (367)
T cd05844 358 RRQTAKL 364 (367)
T ss_pred HHHHHHH
Confidence 8766544
No 12
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=46.39 E-value=68 Score=33.31 Aligned_cols=83 Identities=11% Similarity=-0.022 Sum_probs=58.3
Q ss_pred ccccchHHHHhcCCcccccCcchhhhhhhhc--cCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHh
Q 011592 301 AWSVSEKYILACDSMTLLVKPYFHDFFIRYL--QPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEE 378 (482)
Q Consensus 301 a~S~RlkyLL~~~SvVlk~~s~~~e~f~~~L--~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~ 378 (482)
+....+---|+||-.|+..+.. ...+ ....+++- ..|. +++.++|..+.++++. .++++++|++++.+.
T Consensus 310 G~~~~~lEAma~G~PVV~t~~~-----~~~i~~~~~~g~lv-~~~~--~~la~ai~~ll~~~~~-~~~~~~~ar~~v~~~ 380 (397)
T TIGR03087 310 GIQNKVLEAMAMAKPVVASPEA-----AEGIDALPGAELLV-AADP--ADFAAAILALLANPAE-REELGQAARRRVLQH 380 (397)
T ss_pred CcccHHHHHHHcCCCEEecCcc-----cccccccCCcceEe-CCCH--HHHHHHHHHHHcCHHH-HHHHHHHHHHHHHHh
Confidence 3444566678999888776421 1122 24456653 3443 8899999998889998 999999999999988
Q ss_pred hChhHHHHHHHHHH
Q 011592 379 LKMEYVYDYMFHLL 392 (482)
Q Consensus 379 L~~~~v~~Y~~~LL 392 (482)
.+.+.+..=+..+|
T Consensus 381 fsw~~~~~~~~~~l 394 (397)
T TIGR03087 381 YHWPRNLARLDALL 394 (397)
T ss_pred CCHHHHHHHHHHHh
Confidence 88887666555544
No 13
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=46.28 E-value=55 Score=33.98 Aligned_cols=75 Identities=12% Similarity=-0.066 Sum_probs=52.2
Q ss_pred chHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhChhHH
Q 011592 305 SEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELKMEYV 384 (482)
Q Consensus 305 RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~~~~v 384 (482)
.+---|+||-.|+..+.. -..+.+....+=+-+..+. .++|.++|..+.+++++ .++++++|++.+.++.+.+.+
T Consensus 316 ~llEAmA~G~PVIas~~~---g~~e~i~~~~~G~lv~~~d-~~~la~~i~~ll~~~~~-~~~l~~~ar~~~~~~fs~~~~ 390 (396)
T cd03818 316 SLLEAMACGCLVVGSDTA---PVREVITDGENGLLVDFFD-PDALAAAVIELLDDPAR-RARLRRAARRTALRYDLLSVC 390 (396)
T ss_pred HHHHHHHCCCCEEEcCCC---CchhhcccCCceEEcCCCC-HHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHhccHHHH
Confidence 355668999988876532 2233344444333333221 37899999998899998 999999999999888886654
No 14
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=46.16 E-value=78 Score=30.61 Aligned_cols=81 Identities=12% Similarity=0.003 Sum_probs=56.3
Q ss_pred ccccchHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhC
Q 011592 301 AWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELK 380 (482)
Q Consensus 301 a~S~RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~ 380 (482)
+++..+---|+||-.|+..+.. -..+.+....+=+-+..+. .+++.+++..+.++++. .++++++|++++.+..+
T Consensus 275 ~~~~~~~Ea~~~G~Pvi~s~~~---~~~~~i~~~~~g~~~~~~~-~~~~~~~i~~l~~~~~~-~~~~~~~~~~~~~~~~s 349 (359)
T cd03808 275 GLPRVLLEAMAMGRPVIATDVP---GCREAVIDGVNGFLVPPGD-AEALADAIERLIEDPEL-RARMGQAARKRAEEEFD 349 (359)
T ss_pred CcchHHHHHHHcCCCEEEecCC---CchhhhhcCcceEEECCCC-HHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHhcC
Confidence 4566677778999877775432 1233343344433444332 37889999998899999 99999999999888888
Q ss_pred hhHHHH
Q 011592 381 MEYVYD 386 (482)
Q Consensus 381 ~~~v~~ 386 (482)
.+.+..
T Consensus 350 ~~~~~~ 355 (359)
T cd03808 350 EEIVVK 355 (359)
T ss_pred HHHHHH
Confidence 776653
No 15
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=44.26 E-value=1.1e+02 Score=31.09 Aligned_cols=85 Identities=9% Similarity=-0.070 Sum_probs=56.7
Q ss_pred cccchHHHHhcCCcccccCcc-hhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhC
Q 011592 302 WSVSEKYILACDSMTLLVKPY-FHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELK 380 (482)
Q Consensus 302 ~S~RlkyLL~~~SvVlk~~s~-~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~ 380 (482)
++.-+---|+||-.|+..+.. ..| .+....+=+-+..+. .+++.+++..+.++++. .+.++++|++.+.+.++
T Consensus 285 ~~~~~lEAma~G~Pvv~s~~~g~~e----~i~~~~~g~~~~~~d-~~~la~~i~~l~~~~~~-~~~~~~~a~~~~~~~fs 358 (374)
T TIGR03088 285 ISNTILEAMASGLPVIATAVGGNPE----LVQHGVTGALVPPGD-AVALARALQPYVSDPAA-RRAHGAAGRARAEQQFS 358 (374)
T ss_pred CchHHHHHHHcCCCEEEcCCCCcHH----HhcCCCceEEeCCCC-HHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHhCC
Confidence 444556678899877765421 233 233333322233322 37899999988889988 99999999999998998
Q ss_pred hhHHHHHHHHHH
Q 011592 381 MEYVYDYMFHLL 392 (482)
Q Consensus 381 ~~~v~~Y~~~LL 392 (482)
.+.+..-+..+.
T Consensus 359 ~~~~~~~~~~~y 370 (374)
T TIGR03088 359 INAMVAAYAGLY 370 (374)
T ss_pred HHHHHHHHHHHH
Confidence 887766554443
No 16
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=43.88 E-value=1.1e+02 Score=29.65 Aligned_cols=79 Identities=14% Similarity=0.089 Sum_probs=55.0
Q ss_pred ccccchHHHHhcCCcccccCcc-hhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhh
Q 011592 301 AWSVSEKYILACDSMTLLVKPY-FHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEEL 379 (482)
Q Consensus 301 a~S~RlkyLL~~~SvVlk~~s~-~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L 379 (482)
+++..+---|+||-.|+..... ..|+..+ .--+++.. + .+++.+++..+.+++++ .+++++++++++++.+
T Consensus 280 ~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~----~g~~~~~~-~--~~~l~~~i~~l~~~~~~-~~~~~~~~~~~~~~~~ 351 (365)
T cd03807 280 GFPNVLLEAMACGLPVVATDVGDNAELVGD----TGFLVPPG-D--PEALAEAIEALLADPAL-RQALGEAARERIEENF 351 (365)
T ss_pred cCCcHHHHHHhcCCCEEEcCCCChHHHhhc----CCEEeCCC-C--HHHHHHHHHHHHhChHH-HHHHHHHHHHHHHHhC
Confidence 4566677778889877765433 3344433 12233322 2 37899999998889988 9999999999999988
Q ss_pred ChhHHHHH
Q 011592 380 KMEYVYDY 387 (482)
Q Consensus 380 ~~~~v~~Y 387 (482)
+.+.+..=
T Consensus 352 s~~~~~~~ 359 (365)
T cd03807 352 SIEAMVEA 359 (365)
T ss_pred CHHHHHHH
Confidence 88766543
No 17
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=43.72 E-value=1e+02 Score=30.39 Aligned_cols=79 Identities=11% Similarity=-0.008 Sum_probs=54.4
Q ss_pred ccccchHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhC
Q 011592 301 AWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELK 380 (482)
Q Consensus 301 a~S~RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~ 380 (482)
+++..+-.-|+||-.|+..+... .+.+.....-+-+..+. .+++.+++..+.++++. .+++++++++++++ ++
T Consensus 281 ~~~~~~~Ea~a~G~PvI~~~~~~----~~~i~~~~~g~~~~~~d-~~~~~~~l~~l~~~~~~-~~~~~~~~~~~~~~-~s 353 (366)
T cd03822 281 TQSGVLAYAIGFGKPVISTPVGH----AEEVLDGGTGLLVPPGD-PAALAEAIRRLLADPEL-AQALRARAREYARA-MS 353 (366)
T ss_pred ccchHHHHHHHcCCCEEecCCCC----hheeeeCCCcEEEcCCC-HHHHHHHHHHHHcChHH-HHHHHHHHHHHHhh-CC
Confidence 66666777799999888765332 22333333333233322 37899999998888888 89999999999987 87
Q ss_pred hhHHHH
Q 011592 381 MEYVYD 386 (482)
Q Consensus 381 ~~~v~~ 386 (482)
.+.+..
T Consensus 354 ~~~~~~ 359 (366)
T cd03822 354 WERVAE 359 (366)
T ss_pred HHHHHH
Confidence 776544
No 18
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=43.45 E-value=61 Score=31.79 Aligned_cols=81 Identities=10% Similarity=0.005 Sum_probs=52.9
Q ss_pred ccccchHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhC
Q 011592 301 AWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELK 380 (482)
Q Consensus 301 a~S~RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~ 380 (482)
+.+..+---|+||-.|+..+... ..+.+.....-+-+..+. .++|.++|.-+..++++ .++++++|++++.+..+
T Consensus 311 ~~p~~~~Ea~~~G~pvi~~~~~~---~~~~~~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~s 385 (394)
T cd03794 311 VSPSKLFEYMAAGKPVLASVDGE---SAELVEEAGAGLVVPPGD-PEALAAAILELLDDPEE-RAEMGENGRRYVEEKFS 385 (394)
T ss_pred cCchHHHHHHHCCCcEEEecCCC---chhhhccCCcceEeCCCC-HHHHHHHHHHHHhChHH-HHHHHHHHHHHHHHhhc
Confidence 33445566788898777654322 122222322222233211 37889999888889999 99999999999998888
Q ss_pred hhHHHH
Q 011592 381 MEYVYD 386 (482)
Q Consensus 381 ~~~v~~ 386 (482)
.+.+..
T Consensus 386 ~~~~~~ 391 (394)
T cd03794 386 REKLAE 391 (394)
T ss_pred HHHHHH
Confidence 776653
No 19
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=43.30 E-value=84 Score=31.97 Aligned_cols=78 Identities=10% Similarity=0.034 Sum_probs=52.3
Q ss_pred HHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCC-----cccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhCh
Q 011592 307 KYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDK-----CKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELKM 381 (482)
Q Consensus 307 kyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~-----~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~~ 381 (482)
.--|+||-.|+..... -..+.+.....-+-+..+.. .++|.+++..+.+++++ .++++++|++.+.+..+.
T Consensus 298 lEA~a~G~PvI~s~~~---~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~-~~~~~~~a~~~~~~~~s~ 373 (388)
T TIGR02149 298 LEAMACGTPVVASATG---GIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPEL-AKKMGIAGRKRAEEEFSW 373 (388)
T ss_pred HHHHHcCCCEEEeCCC---CHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHhCCH
Confidence 4558888877765432 22333444443333443320 14788888888889998 999999999999888888
Q ss_pred hHHHHHH
Q 011592 382 EYVYDYM 388 (482)
Q Consensus 382 ~~v~~Y~ 388 (482)
+.+..-+
T Consensus 374 ~~~~~~~ 380 (388)
T TIGR02149 374 GSIAKKT 380 (388)
T ss_pred HHHHHHH
Confidence 7765533
No 20
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=42.85 E-value=58 Score=34.65 Aligned_cols=80 Identities=11% Similarity=0.052 Sum_probs=55.2
Q ss_pred chHHHHhcCCcccccCc-chhhhhhhhccCCce--EEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhCh
Q 011592 305 SEKYILACDSMTLLVKP-YFHDFFIRYLQPLRH--YWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELKM 381 (482)
Q Consensus 305 RlkyLL~~~SvVlk~~s-~~~e~f~~~L~P~~H--YVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~~ 381 (482)
-.---|+||-.|+.... -..|.. ....+ .+|.. | .++|..+|..+.++++. +++++++|++++.+..+.
T Consensus 356 ~~lEAma~G~PvV~s~~gg~~eiv----~~~~~G~lv~~~-d--~~~la~~i~~ll~~~~~-~~~~~~~a~~~~~~~fsw 427 (439)
T TIGR02472 356 TLLEAAACGLPIVATDDGGPRDII----ANCRNGLLVDVL-D--LEAIASALEDALSDSSQ-WQLWSRNGIEGVRRHYSW 427 (439)
T ss_pred HHHHHHHhCCCEEEeCCCCcHHHh----cCCCcEEEeCCC-C--HHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHhCCH
Confidence 35566888887776542 133333 33322 23332 2 27899999999899999 999999999999988998
Q ss_pred hHHHHHHHHHH
Q 011592 382 EYVYDYMFHLL 392 (482)
Q Consensus 382 ~~v~~Y~~~LL 392 (482)
+.+..=+..+|
T Consensus 428 ~~~~~~~~~l~ 438 (439)
T TIGR02472 428 DAHVEKYLRIL 438 (439)
T ss_pred HHHHHHHHHHh
Confidence 87766555544
No 21
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=41.25 E-value=60 Score=32.16 Aligned_cols=78 Identities=10% Similarity=-0.009 Sum_probs=50.9
Q ss_pred cccchHHHHhcCCcccccCcc-hhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhC
Q 011592 302 WSVSEKYILACDSMTLLVKPY-FHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELK 380 (482)
Q Consensus 302 ~S~RlkyLL~~~SvVlk~~s~-~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~ 380 (482)
++..+---|+||-.|+..+.. ..+.... ....=.-+..+. .+++.+++..+.+++++ .++++++|+++++++.+
T Consensus 278 ~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~~~g~~~~~~d-~~~~~~~i~~l~~~~~~-~~~~~~~~~~~~~~~~s 352 (357)
T cd03795 278 FGIVLLEAMAFGKPVISTEIGTGGSYVNL---HGVTGLVVPPGD-PAALAEAIRRLLEDPEL-RERLGEAARERAEEEFT 352 (357)
T ss_pred cchHHHHHHHcCCCEEecCCCCchhHHhh---CCCceEEeCCCC-HHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHhcc
Confidence 333455567888877775432 2222211 122222222221 37899999999999999 99999999999999888
Q ss_pred hhHH
Q 011592 381 MEYV 384 (482)
Q Consensus 381 ~~~v 384 (482)
.+.+
T Consensus 353 ~~~~ 356 (357)
T cd03795 353 ADRM 356 (357)
T ss_pred hHhh
Confidence 7654
No 22
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=40.05 E-value=97 Score=30.29 Aligned_cols=73 Identities=7% Similarity=-0.073 Sum_probs=53.3
Q ss_pred ccccchHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhh
Q 011592 301 AWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEEL 379 (482)
Q Consensus 301 a~S~RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L 379 (482)
+++..+---|+||-.|+.... ..+.+.+....+-+-+..+. .++.+++..+.++++. .++++++++++++++.
T Consensus 290 ~~~~~~~Ea~~~g~PvI~~~~---~~~~~~i~~~~~g~~~~~~~--~~~~~~i~~l~~~~~~-~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 290 TQGLVLLEAMAAGLPVVAVDA---PGLPDLVADGENGFLFPPGD--EALAEALLRLLQDPEL-RRRLSKNAEESAEKFS 362 (374)
T ss_pred CcChHHHHHHHcCCcEEEeCC---CChhhheecCceeEEeCCCC--HHHHHHHHHHHhChHH-HHHHHHHHHHHHHHHH
Confidence 344556667889988887553 23445556656665565543 3899999999999999 9999999999997765
No 23
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=39.91 E-value=51 Score=29.40 Aligned_cols=69 Identities=12% Similarity=0.065 Sum_probs=47.9
Q ss_pred ccccchHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHH
Q 011592 301 AWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNF 374 (482)
Q Consensus 301 a~S~RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~f 374 (482)
+++..+---|+||.+||... ...+.+.+.+..+-+-++... ..++.++|.-+.++++. .+.++++|++|
T Consensus 104 ~~~~~~~Ea~~~g~pvI~~~---~~~~~e~~~~~~~g~~~~~~~-~~~l~~~i~~~l~~~~~-~~~l~~~~~~~ 172 (172)
T PF00534_consen 104 GFGLSLLEAMACGCPVIASD---IGGNNEIINDGVNGFLFDPND-IEELADAIEKLLNDPEL-RQKLGKNARER 172 (172)
T ss_dssp SS-HHHHHHHHTT-EEEEES---STHHHHHSGTTTSEEEESTTS-HHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred ccccccccccccccceeecc---ccCCceeeccccceEEeCCCC-HHHHHHHHHHHHCCHHH-HHHHHHHhcCC
Confidence 55666777899999888765 344455555666433333321 37899999999999998 99999999976
No 24
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=38.97 E-value=1.2e+02 Score=30.14 Aligned_cols=80 Identities=14% Similarity=0.205 Sum_probs=51.8
Q ss_pred cccchHHHHhcCCcccccCcc-hhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhC
Q 011592 302 WSVSEKYILACDSMTLLVKPY-FHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELK 380 (482)
Q Consensus 302 ~S~RlkyLL~~~SvVlk~~s~-~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~ 380 (482)
++..+---|+||-.|+..+.. ..|. +.....=+-+..+. .+++.+++..+.+++++ .+++++++++++.+..+
T Consensus 277 ~g~~~~Eam~~g~PvI~~~~~~~~e~----~~~~~~g~~~~~~~-~~~~~~~l~~l~~~~~~-~~~~~~~~~~~~~~~~s 350 (365)
T cd03825 277 FPNTAIEALACGTPVVAFDVGGIPDI----VDHGVTGYLAKPGD-PEDLAEGIEWLLADPDE-REELGEAARELAENEFD 350 (365)
T ss_pred ccHHHHHHHhcCCCEEEecCCCChhh----eeCCCceEEeCCCC-HHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHhcC
Confidence 445556678888877765421 2332 22222222233221 37889999988889998 99999999999988887
Q ss_pred hhHHHHH
Q 011592 381 MEYVYDY 387 (482)
Q Consensus 381 ~~~v~~Y 387 (482)
.+.+..=
T Consensus 351 ~~~~~~~ 357 (365)
T cd03825 351 SRVQAKR 357 (365)
T ss_pred HHHHHHH
Confidence 7655443
No 25
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=36.14 E-value=60 Score=34.16 Aligned_cols=68 Identities=16% Similarity=0.120 Sum_probs=44.9
Q ss_pred hHHHHhcCCcccccC--cchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHh
Q 011592 306 EKYILACDSMTLLVK--PYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEE 378 (482)
Q Consensus 306 lkyLL~~~SvVlk~~--s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~ 378 (482)
.---|+||..|+... ..+.|-.. .+...---+++. | .++|.+++..+.++++. +++++++|++++.+.
T Consensus 337 ~lEAma~G~PVI~g~~~~~~~e~~~-~~~~~g~~~~~~-d--~~~La~~l~~ll~~~~~-~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 337 PLEPAAFGVPVISGPHTFNFKEIFE-RLLQAGAAIQVE-D--AEDLAKAVTYLLTDPDA-RQAYGEAGVAFLKQN 406 (425)
T ss_pred HHHHHHhCCCEEECCCccCHHHHHH-HHHHCCCeEEEC-C--HHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHhC
Confidence 345688888777632 12333322 222222334433 3 27899999988889999 999999999999765
No 26
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=34.62 E-value=1e+02 Score=30.56 Aligned_cols=80 Identities=15% Similarity=0.086 Sum_probs=54.2
Q ss_pred cccchHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhCh
Q 011592 302 WSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELKM 381 (482)
Q Consensus 302 ~S~RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~~ 381 (482)
++..+---|+||-.|+..... -..+.+.....+++. + +.+.+++..+.++++. .++++++|++.+.+.++.
T Consensus 281 ~~~~~~EAma~G~PvI~s~~~---~~~e~~~~~g~~~~~--~---~~l~~~i~~l~~~~~~-~~~~~~~~~~~~~~~fs~ 351 (363)
T cd04955 281 TNPSLLEAMAYGCPVLASDNP---FNREVLGDKAIYFKV--G---DDLASLLEELEADPEE-VSAMAKAARERIREKYTW 351 (363)
T ss_pred CChHHHHHHHcCCCEEEecCC---ccceeecCCeeEecC--c---hHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHhCCH
Confidence 444566778899888876432 122233333344432 2 2399999999999988 999999999999888887
Q ss_pred hHHHHHHHH
Q 011592 382 EYVYDYMFH 390 (482)
Q Consensus 382 ~~v~~Y~~~ 390 (482)
+.+..=+..
T Consensus 352 ~~~~~~~~~ 360 (363)
T cd04955 352 EKIADQYEE 360 (363)
T ss_pred HHHHHHHHH
Confidence 776554433
No 27
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=34.30 E-value=99 Score=30.54 Aligned_cols=78 Identities=12% Similarity=0.033 Sum_probs=53.0
Q ss_pred cccchHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhCh
Q 011592 302 WSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELKM 381 (482)
Q Consensus 302 ~S~RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~~ 381 (482)
++..+---|+||-.|+.... ....+.+.....=+-+..+. .+++.+++..+.+++++ .++++++|++++++..+.
T Consensus 274 ~~~~~~Ea~a~G~Pvi~~~~---~~~~~~i~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~-~~~~~~~a~~~~~~~~s~ 348 (355)
T cd03799 274 LPVVLMEAMAMGLPVISTDV---SGIPELVEDGETGLLVPPGD-PEALADAIERLLDDPEL-RREMGEAGRARVEEEFDI 348 (355)
T ss_pred ccHHHHHHHHcCCCEEecCC---CCcchhhhCCCceEEeCCCC-HHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHhcCH
Confidence 45555666888887776542 22233444442222233321 37899999999899998 999999999999888877
Q ss_pred hHH
Q 011592 382 EYV 384 (482)
Q Consensus 382 ~~v 384 (482)
+.+
T Consensus 349 ~~~ 351 (355)
T cd03799 349 RKQ 351 (355)
T ss_pred HHH
Confidence 654
No 28
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=33.65 E-value=1.2e+02 Score=31.61 Aligned_cols=82 Identities=11% Similarity=0.024 Sum_probs=55.0
Q ss_pred hHHHHhcCCcccccCcchhhhhhhhccCCce---EEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhChh
Q 011592 306 EKYILACDSMTLLVKPYFHDFFIRYLQPLRH---YWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELKME 382 (482)
Q Consensus 306 lkyLL~~~SvVlk~~s~~~e~f~~~L~P~~H---YVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~~~ 382 (482)
+---|+||-.|+..... -..+.+....+ .++- .| .++|.+++..+.++++. ++++++|++.+.+.++.+
T Consensus 294 ~lEAma~G~PVI~s~~g---g~~Eiv~~~~~G~~l~~~-~d--~~~la~~I~~ll~d~~~--~~~~~~ar~~~~~~fsw~ 365 (380)
T PRK15484 294 AVEAMAAGKPVLASTKG---GITEFVLEGITGYHLAEP-MT--SDSIISDINRTLADPEL--TQIAEQAKDFVFSKYSWE 365 (380)
T ss_pred HHHHHHcCCCEEEeCCC---CcHhhcccCCceEEEeCC-CC--HHHHHHHHHHHHcCHHH--HHHHHHHHHHHHHhCCHH
Confidence 44557888877765421 12223333332 2222 23 37899999988877764 579999999999999988
Q ss_pred HHHHHHHHHHHHH
Q 011592 383 YVYDYMFHLLNEY 395 (482)
Q Consensus 383 ~v~~Y~~~LL~eY 395 (482)
.+..=+..+|..|
T Consensus 366 ~~a~~~~~~l~~~ 378 (380)
T PRK15484 366 GVTQRFEEQIHNW 378 (380)
T ss_pred HHHHHHHHHHHHh
Confidence 8887777777665
No 29
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=33.06 E-value=1.5e+02 Score=30.25 Aligned_cols=82 Identities=6% Similarity=-0.029 Sum_probs=54.1
Q ss_pred cchHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhChhH
Q 011592 304 VSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELKMEY 383 (482)
Q Consensus 304 ~RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~~~~ 383 (482)
...---|+||-.|+..+.. -..+.+..+..-+-+... +++..++..+.+++++ .++++++|++.+.+..+.+.
T Consensus 288 ~~~lEA~a~G~Pvv~s~~~---~~~~~i~~~~~g~~~~~~---~~~a~~i~~ll~~~~~-~~~~~~~a~~~~~~~~s~~~ 360 (372)
T cd03792 288 LTVTEALWKGKPVIAGPVG---GIPLQIEDGETGFLVDTV---EEAAVRILYLLRDPEL-RRKMGANAREHVRENFLITR 360 (372)
T ss_pred HHHHHHHHcCCCEEEcCCC---CchhhcccCCceEEeCCc---HHHHHHHHHHHcCHHH-HHHHHHHHHHHHHHHcCHHH
Confidence 3455668888876665421 112334555555545432 5777888888788888 89999999999988888776
Q ss_pred HHHHHHHHH
Q 011592 384 VYDYMFHLL 392 (482)
Q Consensus 384 v~~Y~~~LL 392 (482)
+..=|..++
T Consensus 361 ~~~~~~~~~ 369 (372)
T cd03792 361 HLKDYLYLI 369 (372)
T ss_pred HHHHHHHHH
Confidence 655444333
No 30
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=32.11 E-value=84 Score=32.01 Aligned_cols=74 Identities=8% Similarity=-0.059 Sum_probs=52.6
Q ss_pred hHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhChhHHH
Q 011592 306 EKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELKMEYVY 385 (482)
Q Consensus 306 lkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~~~~v~ 385 (482)
.---|+||-.|+..+... ..+.+..+..-+=+..|. +++.+++..+.++++. .++++++|++++++..+.+.+.
T Consensus 316 ~lEAma~G~PvI~s~~~~---~~e~i~~~~~g~~~~~~~--~~~a~~i~~l~~~~~~-~~~~~~~a~~~~~~~~s~~~~~ 389 (392)
T cd03805 316 PLEAMYAGKPVIACNSGG---PLETVVDGETGFLCEPTP--EEFAEAMLKLANDPDL-ADRMGAAGRKRVKEKFSTEAFA 389 (392)
T ss_pred HHHHHHcCCCEEEECCCC---cHHHhccCCceEEeCCCH--HHHHHHHHHHHhChHH-HHHHHHHHHHHHHHhcCHHHHh
Confidence 345688998887765322 233455544443344443 7888999988889988 9999999999998888877654
No 31
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=26.38 E-value=1.2e+02 Score=29.88 Aligned_cols=104 Identities=15% Similarity=0.140 Sum_probs=61.5
Q ss_pred CCCCCCcCCceeeeeCCCCc------hhHHHHHhccccCCCCcccceehhhhhhhhccCCccCChhhhccccEEEeeccc
Q 011592 227 GRNWIDREPYAYWKGNPFVA------ETRRDLLTCNLSDKHDWNARLYVQDWILESKRGFQQSNLASQCAHRYKIYIEGY 300 (482)
Q Consensus 227 ~~pW~~K~~kafWRG~~t~~------~~R~~Lv~~~~s~~~~~~a~i~~~~w~~e~~~g~~~v~l~~~c~yKYli~idG~ 300 (482)
..+..+|.-.++++|..... ..|..|+..-...+ ++.. ..... ...+ ...-.+...+-||-+...|.
T Consensus 174 ~~~~~~R~~l~~f~g~~~~~~~~~~~~~r~~l~~~~~~~~-~~~~--~~~~~---~~~~-~~~~~~~l~~S~FCL~p~G~ 246 (302)
T PF03016_consen 174 QRPPARRPYLLFFAGTIRPSSNDYSGGVRQRLLDECKSDP-DFRC--SDGSE---TCPS-PSEYMELLRNSKFCLCPRGD 246 (302)
T ss_pred cCCccCCceEEEEeeeccccccccchhhhhHHHHhcccCC-ccee--eeccc---cccc-chHHHHhcccCeEEEECCCC
Confidence 44667888999999997643 46788876421211 1111 00000 0000 01124556788899999998
Q ss_pred c-cccchHHHHhcCCcccccCcchhhhhhhhccCCceEE
Q 011592 301 A-WSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYW 338 (482)
Q Consensus 301 a-~S~RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYV 338 (482)
+ +|.|+-=-|++|++.+.....+.-=|.+.| +|--|.
T Consensus 247 ~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~l-dw~~fs 284 (302)
T PF03016_consen 247 GPWSRRLYEALAAGCIPVIISDDYVLPFEDVL-DWSRFS 284 (302)
T ss_pred CcccchHHHHhhhceeeEEecCcccCCccccc-CHHHEE
Confidence 6 899999999999966665544444444433 554443
No 32
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=22.77 E-value=3.4e+02 Score=26.34 Aligned_cols=77 Identities=10% Similarity=0.177 Sum_probs=52.6
Q ss_pred ccccchHHHHhcCCcccccCcc-hhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhh
Q 011592 301 AWSVSEKYILACDSMTLLVKPY-FHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEEL 379 (482)
Q Consensus 301 a~S~RlkyLL~~~SvVlk~~s~-~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L 379 (482)
+++..+---|+||-.|+..+.. ..+...+ ...++. ..+. +++.+++..+.+++++ .+.++++|++++.+..
T Consensus 293 ~~~~~~~Eama~G~PvI~~~~~~~~~~~~~----~~~~~~-~~~~--~~~~~~i~~l~~~~~~-~~~~~~~~~~~~~~~~ 364 (375)
T cd03821 293 NFGIVVAEALACGTPVVTTDKVPWQELIEY----GCGWVV-DDDV--DALAAALRRALELPQR-LKAMGENGRALVEERF 364 (375)
T ss_pred CCCcHHHHHHhcCCCEEEcCCCCHHHHhhc----CceEEe-CCCh--HHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHhc
Confidence 3444556668889877765432 3333322 233332 2332 7899999999999988 9999999999988888
Q ss_pred ChhHHH
Q 011592 380 KMEYVY 385 (482)
Q Consensus 380 ~~~~v~ 385 (482)
+.+.+.
T Consensus 365 s~~~~~ 370 (375)
T cd03821 365 SWTAIA 370 (375)
T ss_pred CHHHHH
Confidence 877654
No 33
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=22.07 E-value=2.2e+02 Score=28.68 Aligned_cols=77 Identities=12% Similarity=-0.041 Sum_probs=50.3
Q ss_pred chHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHHhhChhHH
Q 011592 305 SEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQEELKMEYV 384 (482)
Q Consensus 305 RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~~L~~~~v 384 (482)
.+-=-|+||-.|+..+.. ...+.+.....=+=+..+. .+++.++|..+.+++++ .++++++|++++.+..+.+.+
T Consensus 318 ~l~Ea~a~G~Pvi~s~~~---~~~e~i~~~~~g~~~~~~~-~~~l~~~i~~l~~~~~~-~~~~~~~a~~~~~~~~s~~~~ 392 (398)
T cd03800 318 TALEAMACGLPVVATAVG---GPRDIVVDGVTGLLVDPRD-PEALAAALRRLLTDPAL-RRRLSRAGLRRARARYTWERV 392 (398)
T ss_pred HHHHHHhcCCCEEECCCC---CHHHHccCCCCeEEeCCCC-HHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHhCCHHHH
Confidence 345557888777655421 2233343433222233221 37888999888888888 999999999999888887766
Q ss_pred HH
Q 011592 385 YD 386 (482)
Q Consensus 385 ~~ 386 (482)
..
T Consensus 393 ~~ 394 (398)
T cd03800 393 AA 394 (398)
T ss_pred HH
Confidence 54
No 34
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=21.16 E-value=3e+02 Score=26.72 Aligned_cols=72 Identities=6% Similarity=-0.090 Sum_probs=45.9
Q ss_pred ccccchHHHHhcCCcccccCcchhhhhhhhccCCceEEecCCCCCcccHHHHHHhcccccHHHHHHHHHHHHHHHHH
Q 011592 301 AWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKQAQEIGRAASNFIQE 377 (482)
Q Consensus 301 a~S~RlkyLL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~~dL~~~v~w~~~h~~~~Aq~IA~~g~~fa~~ 377 (482)
+++..+---|+||-.|+..+... ..+.+.....=+-+..+. .++|.+++..+.++++. .+.+++++++....
T Consensus 275 ~~~~~~~Ea~a~G~Pvi~~~~~~---~~e~i~~~~~g~~~~~~d-~~~l~~~i~~l~~~~~~-~~~~~~~~~~~~~~ 346 (359)
T cd03823 275 NFPLVIREALAAGVPVIASDIGG---MAELVRDGVNGLLFPPGD-AEDLAAALERLIDDPDL-LERLRAGIEPPRSI 346 (359)
T ss_pred CCChHHHHHHHCCCCEEECCCCC---HHHHhcCCCcEEEECCCC-HHHHHHHHHHHHhChHH-HHHHHHhHHHhhhH
Confidence 45555666788998777665331 223333332222223221 37899999999889999 99999999877643
Done!