Query 011596
Match_columns 482
No_of_seqs 370 out of 2854
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 11:25:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011596.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011596hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 2.2E-37 7.6E-42 344.4 29.0 318 140-479 68-408 (802)
2 1xhb_A Polypeptide N-acetylgal 99.9 1.3E-26 4.5E-31 243.5 15.3 242 219-468 27-301 (472)
3 3bcv_A Putative glycosyltransf 99.9 1.3E-25 4.6E-30 213.5 16.7 205 219-436 3-223 (240)
4 1qg8_A Protein (spore coat pol 99.9 3.3E-26 1.1E-30 219.9 10.0 216 221-457 1-236 (255)
5 2d7i_A Polypeptide N-acetylgal 99.9 3.5E-25 1.2E-29 237.8 13.8 240 219-467 110-378 (570)
6 2z86_A Chondroitin synthase; G 99.9 8E-24 2.7E-28 229.9 21.1 218 219-445 91-337 (625)
7 2ffu_A Ppgalnact-2, polypeptid 99.9 1.6E-24 5.6E-29 229.3 15.3 251 219-481 64-353 (501)
8 2z86_A Chondroitin synthase; G 99.9 1.8E-23 6.1E-28 227.1 13.4 220 219-459 373-596 (625)
9 4fix_A UDP-galactofuranosyl tr 99.9 1.2E-22 4.1E-27 220.4 14.6 229 219-454 178-439 (657)
10 3ckj_A Putative uncharacterize 99.9 6.9E-22 2.4E-26 198.0 16.5 203 219-437 46-263 (329)
11 3l7i_A Teichoic acid biosynthe 99.8 7.6E-22 2.6E-26 218.0 0.0 200 220-435 1-203 (729)
12 3f1y_A Mannosyl-3-phosphoglyce 99.8 4.7E-19 1.6E-23 180.7 19.0 199 220-437 93-308 (387)
13 2nxv_A ATP synthase subunits r 99.8 4.5E-18 1.5E-22 163.4 14.8 184 219-439 14-204 (249)
14 2fy7_A Beta-1,4-galactosyltran 99.8 6.5E-19 2.2E-23 172.5 7.2 178 219-460 63-262 (287)
15 2bo4_A Mannosylglycerate synth 99.6 1.2E-14 4.2E-19 147.9 16.3 198 224-433 3-212 (397)
16 2wvl_A Mannosyl-3-phosphoglyce 99.1 2.5E-10 8.5E-15 111.7 11.3 104 220-331 52-179 (391)
17 1fo8_A Alpha-1,3-mannosyl-glyc 98.9 3.8E-09 1.3E-13 105.1 10.5 119 221-348 2-139 (343)
18 2zu9_A Mannosyl-3-phosphoglyce 98.9 4.2E-09 1.4E-13 105.8 8.6 109 221-337 51-185 (394)
19 3lw6_A FI08434P, beta-4-galact 97.4 0.00061 2.1E-08 64.7 9.9 178 220-460 50-249 (287)
20 2c0n_A A197; thermophil protei 96.7 0.0027 9.3E-08 56.9 6.9 103 309-427 51-165 (203)
21 3tqd_A 3-deoxy-manno-octuloson 95.9 0.024 8.1E-07 53.8 9.0 183 234-432 35-235 (256)
22 4fcu_A 3-deoxy-manno-octuloson 95.6 0.047 1.6E-06 51.6 9.6 183 233-431 26-226 (253)
23 1v84_A Galactosylgalactosylxyl 95.3 0.073 2.5E-06 49.8 9.5 103 220-333 2-128 (253)
24 3cu0_A Galactosylgalactosylxyl 95.3 0.16 5.6E-06 47.9 11.8 103 219-332 19-153 (281)
25 2d0j_A Galactosylgalactosylxyl 94.8 0.24 8.2E-06 46.1 11.3 103 220-333 2-122 (246)
26 3k8d_A 3-deoxy-manno-octuloson 94.0 0.24 8.1E-06 47.0 9.8 177 234-430 44-240 (264)
27 3oam_A 3-deoxy-manno-octuloson 93.5 0.25 8.5E-06 46.3 8.9 91 234-339 28-119 (252)
28 1omz_A Alpha-1,4-N-acetylhexos 92.2 0.81 2.8E-05 43.8 10.4 117 220-349 27-143 (293)
29 1qwj_A Cytidine monophospho-N- 88.7 5.7 0.0002 36.0 12.7 93 233-339 28-123 (229)
30 2wee_A MOBA-related protein; u 88.1 2.5 8.5E-05 37.2 9.6 90 232-335 30-120 (197)
31 2waw_A MOBA relate protein; un 88.1 3.8 0.00013 35.9 10.8 90 232-335 30-120 (199)
32 2y6p_A 3-deoxy-manno-octuloson 85.9 4.4 0.00015 36.7 10.2 90 232-341 26-116 (234)
33 3st8_A Bifunctional protein GL 82.3 6.6 0.00022 40.4 10.8 112 226-346 34-147 (501)
34 1vic_A 3-deoxy-manno-octuloson 80.4 8.9 0.0003 35.5 10.0 92 232-338 26-118 (262)
35 1h7e_A 3-deoxy-manno-octuloson 80.3 14 0.00047 33.6 11.2 92 231-339 25-117 (245)
36 3juk_A UDP-glucose pyrophospho 79.8 1.7 5.9E-05 40.9 4.9 104 227-340 28-153 (281)
37 3f1c_A Putative 2-C-methyl-D-e 79.1 6.9 0.00024 36.0 8.7 99 232-340 31-134 (246)
38 2j0a_A Beta-1,3-N-acetylglucos 78.6 2.2 7.4E-05 40.6 5.1 108 310-431 92-210 (280)
39 1ezi_A CMP-N-acetylneuraminic 76.2 16 0.00055 32.8 10.2 94 232-338 28-124 (228)
40 3ngw_A Molybdopterin-guanine d 76.0 11 0.00038 33.8 8.9 86 231-338 24-110 (208)
41 4fce_A Bifunctional protein GL 75.7 11 0.00038 37.9 9.8 96 233-345 36-132 (459)
42 3rsb_A Adenosylcobinamide-phos 75.3 7.4 0.00025 34.1 7.5 93 232-338 26-119 (196)
43 3q80_A 2-C-methyl-D-erythritol 75.0 18 0.00061 33.0 10.2 93 231-338 33-127 (231)
44 2v0h_A Bifunctional protein GL 72.0 24 0.0008 35.4 11.2 90 233-338 33-123 (456)
45 2qh5_A PMI, ALGA, mannose-6-ph 71.9 23 0.00078 33.7 10.6 95 227-335 31-128 (308)
46 2vsh_A TARI, 2-C-methyl-D-eryt 69.7 15 0.0005 33.0 8.3 98 232-339 30-134 (236)
47 1e5k_A Molybdopterin-guanine d 69.3 14 0.00047 32.8 7.8 84 232-335 32-116 (201)
48 3d5n_A Q97W15_sulso; NESG, SSR 67.6 7.2 0.00025 34.5 5.5 85 231-336 26-112 (197)
49 2ux8_A Glucose-1-phosphate uri 66.2 7.5 0.00026 36.8 5.7 98 233-338 45-160 (297)
50 1vgw_A 4-diphosphocytidyl-2C-m 65.3 30 0.001 30.8 9.4 97 231-340 32-133 (231)
51 3tzt_A Glycosyl transferase fa 63.8 39 0.0013 31.6 10.1 101 222-326 5-115 (276)
52 4ecm_A Glucose-1-phosphate thy 63.2 13 0.00046 34.4 6.7 95 232-338 54-148 (269)
53 2pa4_A UTP-glucose-1-phosphate 61.5 16 0.00054 35.1 7.1 58 281-340 104-162 (323)
54 3pnn_A Conserved domain protei 61.5 35 0.0012 32.3 9.5 100 226-338 25-141 (303)
55 1lvw_A Glucose-1-phosphate thy 59.6 35 0.0012 32.3 9.0 99 226-337 28-127 (295)
56 2e3d_A UTP--glucose-1-phosphat 59.1 16 0.00055 34.5 6.6 102 228-338 35-161 (302)
57 2xwl_A 2-C-methyl-D-erythritol 59.1 29 0.001 30.7 8.1 89 232-336 29-118 (223)
58 1fxo_A Glucose-1-phosphate thy 58.4 29 0.00099 32.7 8.2 99 226-337 27-126 (293)
59 1g9r_A Glycosyl transferase; a 54.3 31 0.001 32.9 7.7 89 233-327 12-111 (311)
60 1hm9_A GLMU, UDP-N-acetylgluco 53.3 21 0.00071 36.0 6.6 95 228-339 35-130 (468)
61 1i52_A 4-diphosphocytidyl-2-C- 52.9 32 0.0011 30.9 7.3 94 232-340 34-128 (236)
62 2yc3_A 2-C-methyl-D-erythritol 52.7 29 0.00099 30.9 6.9 93 233-338 32-125 (228)
63 3cgx_A Putative nucleotide-dip 47.5 1.2E+02 0.004 27.7 10.2 47 292-338 83-130 (242)
64 1w55_A ISPD/ISPF bifunctional 46.5 43 0.0015 32.9 7.4 87 232-339 30-117 (371)
65 1mc3_A Glucose-1-phosphate thy 45.9 39 0.0013 31.9 6.8 98 227-337 29-127 (296)
66 1ll2_A Glycogenin-1; protein-s 40.6 1.3E+02 0.0045 28.8 9.8 89 229-326 10-109 (333)
67 2gak_A Beta-1,6-N-acetylglucos 38.4 2.9E+02 0.01 27.0 12.3 106 220-336 83-199 (391)
68 2e8b_A Probable molybdopterin- 36.2 1.2E+02 0.0039 26.4 8.0 78 234-333 41-120 (201)
69 1yp2_A Glucose-1-phosphate ade 29.9 1.2E+02 0.0042 30.0 7.9 104 227-338 46-161 (451)
70 3u2u_A Glycogenin-1, GN-1, GN1 29.0 2.4E+02 0.0081 26.0 9.1 89 229-326 11-110 (263)
71 4evw_A Nucleoside-diphosphate- 27.4 82 0.0028 28.8 5.6 93 227-327 25-121 (255)
72 3brk_X Glucose-1-phosphate ade 25.4 1.4E+02 0.0047 29.4 7.3 104 227-338 38-151 (420)
73 2xme_A CTP-inositol-1-phosphat 24.7 74 0.0025 28.3 4.7 86 233-334 45-130 (232)
74 1tzf_A Glucose-1-phosphate cyt 23.8 1.9E+02 0.0064 25.9 7.4 40 296-338 108-147 (259)
75 3rht_A (gatase1)-like protein; 23.7 2.4E+02 0.0082 26.0 8.0 81 255-348 7-88 (259)
76 3kcq_A Phosphoribosylglycinami 21.2 4.3E+02 0.015 23.4 9.1 94 223-331 9-102 (215)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=2.2e-37 Score=344.40 Aligned_cols=318 Identities=27% Similarity=0.382 Sum_probs=224.5
Q ss_pred chhhHhHHHHHHHHHHHHhhHhhccchHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccCCC
Q 011596 140 SPLAIKGAFDLLYSSWVLVRVHYLAPPLQ--FLANACIVLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQK 217 (482)
Q Consensus 140 ~~~~~~~~~~~~y~~w~~~r~~~~~~~l~--~~~~~~~~lf~i~~~~~l~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 217 (482)
++..+..+...+|+.| |...+++... +...+.+.++++..+..+...++.+. ..++..+... .. ..+
T Consensus 68 ~~~~~~~~~~~~y~~w---r~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~----~~~~~~r~~~--~~--~~~ 136 (802)
T 4hg6_A 68 LLLSAASMLVMRYWFW---RLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFL----SADPTDRPFP--RP--LQP 136 (802)
T ss_dssp HHHHHHHHHHHHHHHH---HHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHH----TTSCCCCCCC--CC--CCT
T ss_pred HHHHHHHHHHHHHHHH---HhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH----HhcccCCCCC--CC--CCc
Confidence 3556666777899999 5555555321 11122233333333333333333332 2222221111 01 122
Q ss_pred CCCCeEEEEeecCCchHH-HHHHHHHHHhCCCCCCceEEEEEcCCCCHHHH-----HH----------HHHHHHHhhhCC
Q 011596 218 GFFPMVLVQIPMCNEKEV-YQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQ-----TL----------IKEEVLKWQEAG 281 (482)
Q Consensus 218 ~~~P~VsViIP~yne~~~-l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~-----~~----------~~~~~~~~~~~~ 281 (482)
++.|+|||+||+|||++. +++|++|+++|+||+++++|+|+||+|+|.+. ++ +++..+ +.+
T Consensus 137 ~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~---~~~ 213 (802)
T 4hg6_A 137 EELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCR---ELG 213 (802)
T ss_dssp TTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHH---HHT
T ss_pred cCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHH---hcC
Confidence 368999999999999954 59999999999999988999999999998883 22 222222 345
Q ss_pred CeEEEEeccCCCCCccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHH
Q 011596 282 ANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTR 361 (482)
Q Consensus 282 v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~ 361 (482)
+.+ ..+++++++|++|+|.|++ .+++|||+++|+|+.++||+|++++..|+++|++++|++...+.+.+. ....
T Consensus 214 v~~--i~~~~~~~GKa~alN~gl~---~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~-~~~~ 287 (802)
T 4hg6_A 214 VVY--STRERNEHAKAGNMSAALE---RLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDP-IQRN 287 (802)
T ss_dssp CEE--EECSSCCSHHHHHHHHHHH---HCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCH-HHHH
T ss_pred cEE--EEecCCCCcchHHHHHHHH---hcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCch-Hhhh
Confidence 554 4566676789999999999 689999999999999999999999999987899999999988777641 1111
Q ss_pred HHhh-----hhhhhhhhhhhhccccccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHHCCCcEEEeccceec
Q 011596 362 LQDI-----NLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQ 436 (482)
Q Consensus 362 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 436 (482)
.... .....+.......... +...++|+++++||++++++|||++..++||.+++.++.++||++.|+|++.++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~~~~~Rr~al~~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~~~~~ 366 (802)
T 4hg6_A 288 LALGDRCPPENEMFYGKIHRGLDRW-GGAFFCGSAAVLRRRALDEAGGFAGETITEDAETALEIHSRGWKSLYIDRAMIA 366 (802)
T ss_dssp HTCCTTSCCTTHHHHHTHHHHHHHT-TCCCCCSSSEEEEHHHHHHHTTCCCSSSSHHHHHHHHHHTTTCCEEECCCCCEE
T ss_pred hhHHhhhhHHHHHHHHHHHhhHhhc-CCceecccchhhhHHHHHHcCCcCCCCcchHHHHHHHHHHcCCeEEEecCCEEE
Confidence 1100 0011111111111111 112268999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCHHHHHHHHHhhhhhhHHHHHHhChhhhhcCcchhhcc
Q 011596 437 CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKVYILSNT 479 (482)
Q Consensus 437 ~~~p~t~~~~~~qr~RW~~G~~q~~~~~~~~i~~s~~~~~~k~ 479 (482)
++.|+|+.++++||.||.+|.+|.++.+.+ +.++++++.+|+
T Consensus 367 ~~~p~t~~~~~~Qr~RW~~G~~q~l~~~~p-l~~~~l~~~~rl 408 (802)
T 4hg6_A 367 GLQPETFASFIQQRGRWATGMMQMLLLKNP-LFRRGLGIAQRL 408 (802)
T ss_dssp ECCCCSHHHHHHHHHHHHHHHHHHHHHSCT-TSCSSCCHHHHH
T ss_pred ecCCCCHHHHHHHHHHHHccHHHHHHHhCc-cccCCCCHHHHH
Confidence 999999999999999999999999988754 445566666554
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.94 E-value=1.3e-26 Score=243.46 Aligned_cols=242 Identities=13% Similarity=0.160 Sum_probs=174.2
Q ss_pred CCCeEEEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCH-HHHHHHHHHHHHhhhCCCeEEEEeccCCCCCc
Q 011596 219 FFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDP-TAQTLIKEEVLKWQEAGANIVYRHRILRDGYK 296 (482)
Q Consensus 219 ~~P~VsViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd-~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~K 296 (482)
..|+||||||+|||+ +.+.+||+|+++|+||+..+|||||||+|+| .+.++++++.++++ .++.++..+.+.| +
T Consensus 27 ~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~---~~v~vi~~~~n~G-~ 102 (472)
T 1xhb_A 27 NLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLK---VPVHVIRMEQRSG-L 102 (472)
T ss_dssp CCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSS---SCEEEEECSSCCC-H
T ss_pred CCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCC---CcEEEEECCCCCC-h
Confidence 689999999999999 9999999999999998765789999999887 58888887766432 2344444555555 9
Q ss_pred cccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHH---HHH--hhhhhhhh
Q 011596 297 AGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLT---RLQ--DINLSFHF 371 (482)
Q Consensus 297 a~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~---~~~--~~~~~~~~ 371 (482)
+.++|.|++ .+++|||+|+|+|+.++|++|+.++..+.+++.++++ +.....+.+..... ... .+.+...+
T Consensus 103 ~~a~N~g~~---~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (472)
T 1xhb_A 103 IRARLKGAA---VSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVC-PIIDVISDDTFEYMAGSDMTYGGFNWKLNF 178 (472)
T ss_dssp HHHHHHHHH---HCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEE-EEEEEECSSSCCEECCCTTEEEEECTTCCE
T ss_pred HHHHHHHHH---hccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEE-eeeeeEcCCCceeccCCCcccceeecccee
Confidence 999999999 6899999999999999999999999999988876554 33333332211000 000 00000000
Q ss_pred h--------hhhhh-c-cccccccccccceEeeeHHHHHHcCCCCCCCc---hhHHHHHHHHHHCCCcEEEeccceeccc
Q 011596 372 E--------VEQQV-N-GVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLNDVECQCE 438 (482)
Q Consensus 372 ~--------~~~~~-~-~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~~~~ 438 (482)
. ..... . ........+.|+++++||++++++|||++... .||.++++|+.+.|+++.++|.+.+++.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~ 258 (472)
T 1xhb_A 179 RWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHV 258 (472)
T ss_dssp EEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEE
T ss_pred ecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcEEEEE
Confidence 0 00000 0 00112233679999999999999999998754 6999999999999999999999997664
Q ss_pred CCcC-------------HHHHHHHHHhhhhhhHHHHHHhChhh
Q 011596 439 LPES-------------YEAYRKQQHRWHSGPMQLFRLCLPDI 468 (482)
Q Consensus 439 ~p~t-------------~~~~~~qr~RW~~G~~q~~~~~~~~i 468 (482)
...+ .....+...+|..+..+.+....|..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~~p~~ 301 (472)
T 1xhb_A 259 FRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGV 301 (472)
T ss_dssp C------------CHHHHHHHHHHHHHHCGGGGHHHHHTSTTG
T ss_pred ccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhCccc
Confidence 4332 23455666789999888887776654
No 3
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.93 E-value=1.3e-25 Score=213.51 Aligned_cols=205 Identities=14% Similarity=0.148 Sum_probs=142.1
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
..|+|||+||+||+++.|++||+|+++|+|++ +||+|+||+|+|.+.++++++.++++ +++++ + .++ .|++.
T Consensus 3 ~~p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~--~eiIvvDd~S~d~t~~~~~~~~~~~~--~i~~i--~-~~n-~G~~~ 74 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVEKYLDQCVQALLAQTLSD--IEIILIDDESPDNCPKICDDYAAQYP--NIKVI--H-KKN-AGLGM 74 (240)
T ss_dssp CCCSEEEEEEESSCTTTHHHHHHHHHTCSSSS--EEEEEEECCCSSSHHHHHHHHHHHCS--SEEEE--E-CCC-CCHHH
T ss_pred CCCcEEEEEecCCCHHHHHHHHHHHHhCcCCC--eEEEEEECCCCcCHHHHHHHHHhhCC--CEEEE--E-CCC-CChHH
Confidence 46889999999999999999999999999986 78999999999999998888776532 34433 3 334 45999
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCC----hHHH-HHhhhhhhhhhh
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDEN----LLTR-LQDINLSFHFEV 373 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~----~~~~-~~~~~~~~~~~~ 373 (482)
++|.|++ .+++|||+++|+|+.++|++|++++..+.+ ++.+++.+.......+.. +... .....+.. ...
T Consensus 75 a~N~g~~---~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 149 (240)
T 3bcv_A 75 ACNSGLD---VATGEYVAFCDSDDYVDSDMYMTMYNVAQK-YTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNK-NEI 149 (240)
T ss_dssp HHHHHHH---HCCSSEEEECCTTCCCCTTHHHHHHHHHHH-HTCSEEEC--------------------CEEECSH-HHH
T ss_pred HHHHHHH---HcCCCEEEEECCCCcCCHHHHHHHHHHHHh-cCCCEEEEeeEEEccCCccccccccccccccccCH-HHH
Confidence 9999999 689999999999999999999999999986 345555554433332221 1100 00000000 000
Q ss_pred hhhhccccc--------cccccccceEeeeHHHHHHcC-CCCCC--CchhHHHHHHHHHHCCCcEEEeccceec
Q 011596 374 EQQVNGVFI--------NFFGFNGTAGVWRIKALEDSG-GWMER--TTVEDMDIAVRAHLRGWKFIFLNDVECQ 436 (482)
Q Consensus 374 ~~~~~~~~~--------~~~~~~G~~~~~Rr~~l~~iG-gf~~~--~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 436 (482)
......... .....+|+++++||++++++| ||++. ...||.++++|+..+|+++.++|++..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~~~~ 223 (240)
T 3bcv_A 150 HTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQTFYN 223 (240)
T ss_dssp HHHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC-----
T ss_pred HHHHHHHhhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCCeEE
Confidence 000001100 112246788999999999999 99886 4679999999999999999999998643
No 4
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.93 E-value=3.3e-26 Score=219.90 Aligned_cols=216 Identities=13% Similarity=0.141 Sum_probs=153.8
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEecc--C-----CC
Q 011596 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI--L-----RD 293 (482)
Q Consensus 221 P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~--~-----~~ 293 (482)
|+|||+||+||+++.+.+||+|+++|+||+ ++|+|+||+|+|.+.++++++.. ..+++ +...+ . .+
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~q~~~~--~eiivvDd~S~d~t~~~~~~~~~---~~~i~--~i~~~~~~~~~~~~n 73 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILSQTFSD--FELFIMDDNSNEETLNVIRPFLN---DNRVR--FYQSDISGVKERTEK 73 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCSCCC--EEEEEEECSCCHHHHHHHGGGGG---STTEE--EEECCCCSHHHHHSS
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHhccCCc--eEEEEEECCCCchHHHHHHHHhh---cCCEE--EEecccccccccccc
Confidence 689999999999999999999999999986 78999999999999888775432 23444 44333 0 34
Q ss_pred CCccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeee--cCCCChHHHHHhhhhhhhh
Q 011596 294 GYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFV--NKDENLLTRLQDINLSFHF 371 (482)
Q Consensus 294 g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~--n~~~~~~~~~~~~~~~~~~ 371 (482)
.|++.++|.|++ .+++|||+++|+|+.++|++|++++..+.++|++++|++..... +........... .
T Consensus 74 ~G~~~a~N~gi~---~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~---- 144 (255)
T 1qg8_A 74 TRYAALINQAIE---MAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVR--P---- 144 (255)
T ss_dssp CHHHHHHHHHHH---HCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEE--C----
T ss_pred cCHHHHHHHHHH---HcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhccC--c----
Confidence 459999999999 68999999999999999999999999999889999999987665 443221111000 0
Q ss_pred hhhhhhccccccccccccceEeeeHHHHHHcC-CC------CCC-CchhHHHHHHHHHHCCCcEEEeccceecc-cCCcC
Q 011596 372 EVEQQVNGVFINFFGFNGTAGVWRIKALEDSG-GW------MER-TTVEDMDIAVRAHLRGWKFIFLNDVECQC-ELPES 442 (482)
Q Consensus 372 ~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iG-gf------~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~~-~~p~t 442 (482)
. ..... .....+.|+++++||++++++| +| ++. ...||.+++.++...| ++.++|++.+++ ..+.+
T Consensus 145 -~-~~~~~--~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~~~~~~r~~~~s 219 (255)
T 1qg8_A 145 -A-AQVTW--NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDEELDLNYITDQS 219 (255)
T ss_dssp -C-CSCBS--CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEEEEEEEEEC---
T ss_pred -h-HHHHH--hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhC-CEEEecCcEEEEEEcCCc
Confidence 0 00000 1222367899999999999998 78 443 5679999999999987 799999988554 34444
Q ss_pred HHH--HHHHHHhhhhhh
Q 011596 443 YEA--YRKQQHRWHSGP 457 (482)
Q Consensus 443 ~~~--~~~qr~RW~~G~ 457 (482)
... ..+++.+|....
T Consensus 220 ~s~~~~~~~~~~~~~~~ 236 (255)
T 1qg8_A 220 IHFQLFELEKNEFVRNL 236 (255)
T ss_dssp -----------CTGGGS
T ss_pred cchhHHHHHHHHHHHhc
Confidence 433 345566666543
No 5
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.92 E-value=3.5e-25 Score=237.85 Aligned_cols=240 Identities=13% Similarity=0.151 Sum_probs=172.9
Q ss_pred CCCeEEEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHH-HHHHHHHHHHhhhCCCeEEEEeccCCCCCc
Q 011596 219 FFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTA-QTLIKEEVLKWQEAGANIVYRHRILRDGYK 296 (482)
Q Consensus 219 ~~P~VsViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t-~~~~~~~~~~~~~~~v~vv~~~~~~~~g~K 296 (482)
..|+||||||+|||+ +.+.+||.|+++|+||+..+|||||||+|+|.+ .++++++.+++ .+++ +++.+.+.| +
T Consensus 110 ~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~--~~v~--vi~~~~n~G-~ 184 (570)
T 2d7i_A 110 TLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALF--PSVR--ILRTKKREG-L 184 (570)
T ss_dssp SCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTS--TTEE--EEECSSCCC-H
T ss_pred CCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhC--CeEE--EEECCCCCC-H
Confidence 589999999999998 999999999999999875568999999998888 88887766543 2344 444444555 9
Q ss_pred cccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHH-----H-Hhhhhhhh
Q 011596 297 AGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTR-----L-QDINLSFH 370 (482)
Q Consensus 297 a~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~-----~-~~~~~~~~ 370 (482)
+.++|.|++ .+++|||+|+|+|+.++|++|+.++..+.+++++ +|++.....+.+...... . ..+.+...
T Consensus 185 ~~A~N~G~~---~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~-vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (570)
T 2d7i_A 185 IRTRMLGAS---VATGDVITFLDSHCEANVNWLPPLLDRIARNRKT-IVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMY 260 (570)
T ss_dssp HHHHHHHHH---HCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTE-EEEEEEEEECTTTCCEECCTTSSCEEEECTTCC
T ss_pred HHHHHHHHH---hcCCCEEEEEcCCccccccHHHHHHHHHHhCCCE-EEeeeeeccCCCchhhccccCCccccccccccc
Confidence 999999999 6899999999999999999999999999987765 555554444332110000 0 00000000
Q ss_pred hhhhh-----hhc--cccccccccccceEeeeHHHHHHcCCCCCCCc---hhHHHHHHHHHHCCCcEEEeccceecccC-
Q 011596 371 FEVEQ-----QVN--GVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLNDVECQCEL- 439 (482)
Q Consensus 371 ~~~~~-----~~~--~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~~~~~- 439 (482)
+.... ... ........+.|+++++||++++++|||++... .||.++++|+.+.|+++.++|.+.+++..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r 340 (570)
T 2d7i_A 261 YKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYR 340 (570)
T ss_dssp EEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCC
T ss_pred ccccccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEcc
Confidence 00000 000 00112223679999999999999999998743 69999999999999999999999977641
Q ss_pred ---CcC-------HHHHHHHHHhhhhhhHHHHHHhChh
Q 011596 440 ---PES-------YEAYRKQQHRWHSGPMQLFRLCLPD 467 (482)
Q Consensus 440 ---p~t-------~~~~~~qr~RW~~G~~q~~~~~~~~ 467 (482)
|.+ .+...+...+|....-+.+....|.
T Consensus 341 ~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~~~p~ 378 (570)
T 2d7i_A 341 KYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQRRPE 378 (570)
T ss_dssp SSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHTTCGG
T ss_pred ccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 211 3456666788998888777666553
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.91 E-value=8e-24 Score=229.85 Aligned_cols=218 Identities=20% Similarity=0.236 Sum_probs=161.7
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
..|.|||+||+||+++.+.+||.|+.+|+++. .++|+|+||+|+|.+.++++++.+ .. .+.+...+++.+++++
T Consensus 91 ~~p~vsviIp~~n~~~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~~~~~---~~--~i~~i~~~~~~~g~~~ 164 (625)
T 2z86_A 91 IIDGLSIVIPTYNRAKILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVREFES---LL--NIKYVRQKDYGYQLCA 164 (625)
T ss_dssp CCCCEEEEEEESSCHHHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHHTTTT---TS--CEEEEEECCCSCCHHH
T ss_pred cCCcEEEEEecCCcHHHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHHHHHhhh---cC--CeEEEEeCCCCcchhH
Confidence 46899999999999999999999999998875 688999999999999887775422 22 3444444444446999
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhh---------
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSF--------- 369 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~--------- 369 (482)
++|.|++ .+++|||+++|+|+.++|++|..++..+..+|.++++++.....+................
T Consensus 165 a~N~g~~---~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (625)
T 2z86_A 165 VRNLGLR---AAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNN 241 (625)
T ss_dssp HHHHHHH---HCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC-----
T ss_pred HHHHHHH---hCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCC
Confidence 9999999 5899999999999999999999999999988998888887665444322222111100000
Q ss_pred -----------------hhhhhhhhccccccccccccceEeeeHHHHHHcCCCCCCCc---hhHHHHHHHHHHCCCcEEE
Q 011596 370 -----------------HFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIF 429 (482)
Q Consensus 370 -----------------~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~---~ED~~l~~rl~~~G~ki~~ 429 (482)
.+...............+.|+++++||++++++|||++... .||.+++.|+.++|+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~ 321 (625)
T 2z86_A 242 QVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRS 321 (625)
T ss_dssp ----------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEE
T ss_pred chhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEE
Confidence 00000000111112234789999999999999999998754 6999999999999999999
Q ss_pred eccceecccCCcCHHH
Q 011596 430 LNDVECQCELPESYEA 445 (482)
Q Consensus 430 ~~~~~~~~~~p~t~~~ 445 (482)
+|++.+++..+.+...
T Consensus 322 ~p~~~v~H~~~~~~~~ 337 (625)
T 2z86_A 322 VEGAMAYHQEPPGKEN 337 (625)
T ss_dssp CGGGCEEEECCC----
T ss_pred cccchhhccCCccccc
Confidence 9999998887776443
No 7
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.91 E-value=1.6e-24 Score=229.27 Aligned_cols=251 Identities=15% Similarity=0.168 Sum_probs=172.4
Q ss_pred CCCeEEEEeecCCchH-HHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCcc
Q 011596 219 FFPMVLVQIPMCNEKE-VYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA 297 (482)
Q Consensus 219 ~~P~VsViIP~yne~~-~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka 297 (482)
..|.||||||+|||++ .+.++|.|+++|+|++..+|||||||+|+|.+.+.. .++ ..++ .++..+.+.| ++
T Consensus 64 ~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~---~~~--~~~v--~vi~~~~n~G-~~ 135 (501)
T 2ffu_A 64 DLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGAL---LGK--IEKV--RVLRNDRREG-LM 135 (501)
T ss_dssp SCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHG---GGG--BTTE--EEEECSSCCH-HH
T ss_pred CCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHH---Hhc--CCCE--EEEECCCCcC-HH
Confidence 6899999999999997 999999999999998755799999999988774322 222 2234 4444444555 99
Q ss_pred ccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChH-HHH----Hhhhhhhh--
Q 011596 298 GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLL-TRL----QDINLSFH-- 370 (482)
Q Consensus 298 ~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~-~~~----~~~~~~~~-- 370 (482)
.++|.|++ .+++|||+|+|+|+.++|++|+.++..+.+++. ++|++.....+.+.-.. ... ..+.+...
T Consensus 136 ~A~N~G~~---~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (501)
T 2ffu_A 136 RSRVRGAD---AAQAKVLTFLDSHCECNEHWLEPLLERVAEDRT-RVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFK 211 (501)
T ss_dssp HHHHHHHH---HCCSSEEEECCSSEEECTTCHHHHHHHHHHCTT-EEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEE
T ss_pred HHHHHHHH---hcCCCEEEEECCCcccCccHHHHHHHHHHhCCC-eEEEeeeccCcCCCceeecCCcccceEeeecCCCc
Confidence 99999999 689999999999999999999999999987665 56766554443321000 000 00000000
Q ss_pred ---hhhh---hhh-c-cccccccccccceEeeeHHHHHHcCCCCCCCc---hhHHHHHHHHHHCCCcEEEeccceecccC
Q 011596 371 ---FEVE---QQV-N-GVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLNDVECQCEL 439 (482)
Q Consensus 371 ---~~~~---~~~-~-~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~~~~~ 439 (482)
.... ... . ........+.|+++++||++++++|+|++... .||.++++|+.+.|+++.++|.+.+++..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~ 291 (501)
T 2ffu_A 212 WDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 291 (501)
T ss_dssp EEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECC
T ss_pred cccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccCcEEEEEc
Confidence 0000 000 0 00111223578999999999999999998743 89999999999999999999999877752
Q ss_pred --------CcC-----HHHHHHHHHhhhhhhHHHHHHhChhh-------hhcCcchhhcccc
Q 011596 440 --------PES-----YEAYRKQQHRWHSGPMQLFRLCLPDI-------IRAKVYILSNTSC 481 (482)
Q Consensus 440 --------p~t-----~~~~~~qr~RW~~G~~q~~~~~~~~i-------~~s~~~~~~k~~~ 481 (482)
|.. .....+...+|.....+.+....|.. +..+..+.+|+.|
T Consensus 292 r~~~~~~~~~~~~~~~~~n~~r~~~~w~d~~~~~~y~~~p~~~~~~~g~~~~r~~lr~~l~c 353 (501)
T 2ffu_A 292 RKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYGNIQSRLELRKKLSC 353 (501)
T ss_dssp CSSCCSCCTTCHHHHHHHHHHHHHHHHCGGGHHHHHHHCGGGGGCCCCCCHHHHHHHHHTTC
T ss_pred cCcCCCcCCccchhHHHHHHHHHHHHHHHHHHHHHhhcCcccccCCccchHHHHHHHHhcCC
Confidence 111 23444555678888777766666654 2223445555554
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.89 E-value=1.8e-23 Score=227.12 Aligned_cols=220 Identities=14% Similarity=0.167 Sum_probs=164.4
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
..|.|||+||+||+++.+.+||+|+++|+|++ ++|+|+||+|+|.+.+++++..+++ .+++++ . ..+ .|++.
T Consensus 373 ~~~~vsiii~~yn~~~~l~~~l~s~~~q~~~~--~eiivvdd~S~d~t~~~~~~~~~~~--~~i~~~--~-~~n-~G~~~ 444 (625)
T 2z86_A 373 RVPLVSIYIPAYNCSKYIVRCVESALNQTITD--LEVCICDDGSTDDTLRILQEHYANH--PRVRFI--S-QKN-KGIGS 444 (625)
T ss_dssp SSCSEEEEEEESSCTTTHHHHHHHHHSSSCCS--EEEEEEEESCSSSHHHHHHHHHTTC--TTEEEE--E-ECC-CCHHH
T ss_pred cCCeEEEEEeCCCCHHHHHHHHHHHHhCcCCC--eEEEEEECcCChhHHHHHHHHHhhC--CcEEEE--e-CCC-CCHHH
Confidence 46899999999999999999999999999986 7899999999999988887665432 234443 2 334 45999
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhc
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVN 378 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (482)
++|.|++ .+++|||+++|+|+.++|++|++++..+.++|++++|++.....+.+........... .+.... ..
T Consensus 445 a~n~g~~---~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~ 517 (625)
T 2z86_A 445 ASNTAVR---LCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWP---IYSREK-LT 517 (625)
T ss_dssp HHHHHHH---HCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEECCCCS---SCCHHH-HT
T ss_pred HHHHHHH---hcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccCcccc---cCCHHH-Hh
Confidence 9999999 5899999999999999999999999999888999999998776665544322110000 000000 00
Q ss_pred cccccccccccceEeeeHHHHHHcCCCCCC-CchhHHHHHHHHHHCCCcEEEeccceec---ccCCcCHHHHHHHHHhhh
Q 011596 379 GVFINFFGFNGTAGVWRIKALEDSGGWMER-TTVEDMDIAVRAHLRGWKFIFLNDVECQ---CELPESYEAYRKQQHRWH 454 (482)
Q Consensus 379 ~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~---~~~p~t~~~~~~qr~RW~ 454 (482)
...+.|+++++|+++++++|||++. ...||+++++|+.+.| ++.++|++..+ +....+......|+.+|.
T Consensus 518 -----~~~~~~~~~~~~r~~~~~~ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~~~~~~r~h~~~~s~~~~~~~~~~~~ 591 (625)
T 2z86_A 518 -----SAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVG-PFKHINKICYNRVLHGENTSIKKLDIQKENHF 591 (625)
T ss_dssp -----TSCCCCSCEEEEHHHHTTTTCCCSSCSSCHHHHHHHHHTTTS-CEEEEEEEEEEEECC----CCSSHHHHHHHHH
T ss_pred -----hcccCCceEEEEHHHHHHhCCCCCccCChHHHHHHHHHHHhC-CEEEeCCcEEEEEECCCccchhhHHHHHHHHH
Confidence 1125788899999999999999886 4679999999999999 99999998854 333445555556665555
Q ss_pred hhhHH
Q 011596 455 SGPMQ 459 (482)
Q Consensus 455 ~G~~q 459 (482)
....+
T Consensus 592 ~~~~~ 596 (625)
T 2z86_A 592 KVVNE 596 (625)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44333
No 9
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.88 E-value=1.2e-22 Score=220.44 Aligned_cols=229 Identities=13% Similarity=0.117 Sum_probs=156.4
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCc-eEEEEEcCCCCHH--HHHHHHHHHHHhhhCCCeEEEEeccCCCCC
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSK-ILIQVLDDSDDPT--AQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~-~~IiVvDdssdd~--t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~ 295 (482)
..|+||||||+||+++.+.+||+|+.+|+|+.+. .+||||||+|+|. +..+. +..+.. .. ++.++..+ |.|
T Consensus 178 ~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~-e~~~~~-~~--~I~vI~~~-N~G- 251 (657)
T 4fix_A 178 GTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFP-AAAARL-GS--RLSIHDQP-NLG- 251 (657)
T ss_dssp SCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHH-HHHHHH-GG--GEEEEECC-CCH-
T ss_pred CCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHH-HHHHhc-CC--CEEEEECC-CCC-
Confidence 4689999999999999999999999999984322 4899999998762 22222 222211 22 34444443 444
Q ss_pred ccccHHHHhhhcccC-CceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCC------hHHH--H----
Q 011596 296 KAGNLKSAMNCSYVK-DYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDEN------LLTR--L---- 362 (482)
Q Consensus 296 Ka~aln~al~~~~~a-~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~------~~~~--~---- 362 (482)
.+++.|.|++.+... ++|||+++|+|+.++|++|++++..+..+|+++++++.......... +... .
T Consensus 252 ~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~ 331 (657)
T 4fix_A 252 GSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTA 331 (657)
T ss_dssp HHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccc
Confidence 889999999853222 67999999999999999999999999988899999887654433211 0000 0
Q ss_pred -Hhhhhhhh-----hh----hhhhhccccccccccccceEeeeHHHHHHcCCCCCC-CchhHHHHHHHHHHCCCcEEEec
Q 011596 363 -QDINLSFH-----FE----VEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMER-TTVEDMDIAVRAHLRGWKFIFLN 431 (482)
Q Consensus 363 -~~~~~~~~-----~~----~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~-~~~ED~~l~~rl~~~G~ki~~~~ 431 (482)
....+... .. ....... ...+....|+++++|+++++++|+|++. ...||.|+++|+..+||++.++|
T Consensus 332 ~~~~~~~~~f~~~~l~~~~~~~~~~~~-~~~v~~~~g~~~lirr~v~~~vGgfd~~F~~~ED~Dl~lR~~~~G~ki~~~p 410 (657)
T 4fix_A 332 APHAEYDHDFAEYPLNDNNSRSKLLHR-RIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGLRAAEHGYPTVTLP 410 (657)
T ss_dssp CTTCCSCEETTTSCSSCSSHHHHGGGB-CCCCSBCCTTEEEEEHHHHHHHCSCCSCSSSSHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccccccccccccccccccccccccc-ceeccccchhHhHhhHHHHHHhCCChhHhccCcHHHHHHHHHHcCCeEEEEC
Confidence 00000000 00 0011111 1123346889999999999999999854 34699999999999999999999
Q ss_pred cceecccCCcC------HHHHHHHHHhhh
Q 011596 432 DVECQCELPES------YEAYRKQQHRWH 454 (482)
Q Consensus 432 ~~~~~~~~p~t------~~~~~~qr~RW~ 454 (482)
++.+++....+ ++.|+..|.|+.
T Consensus 411 ~a~V~H~~~~~~~~~s~~r~Yy~~RN~l~ 439 (657)
T 4fix_A 411 GAAIWHMAWSDKDDAIDWQAYFHLRNRLV 439 (657)
T ss_dssp EEEEEECCSSSSCCTTSTHHHHHHHHHHH
T ss_pred CEEEEEcCcCccccccHHHHHHHHHHHHH
Confidence 99988855322 456666665543
No 10
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.87 E-value=6.9e-22 Score=197.97 Aligned_cols=203 Identities=14% Similarity=0.087 Sum_probs=142.8
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEE----eccCCCC
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYR----HRILRDG 294 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~----~~~~~~g 294 (482)
..|+|||+||+||+++.|.+||+|+++|+|+. .++|+|+||+|+|.+.++++++ +.++... .....+.
T Consensus 46 ~~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~~~~~~-------~~~~~~~~~~~~~~~~n~ 117 (329)
T 3ckj_A 46 AGRTISVVLPALDEEDTIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEIRAVAA-------GARVVSREQALPEVPIRP 117 (329)
T ss_dssp TTCCEEEEEEESSCTTTHHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHHHHHHT-------TCEEEEHHHHCTTSCCCC
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHHHHHHh-------hhhhccceeeeccCCCCC
Confidence 45899999999999999999999999999984 4789999999999998887743 3332211 1133445
Q ss_pred CccccHHHHhhhcccCCceEEEEEcCCCC-CChHHHHHHHHHhhcCCCeEEEeeeeeeecC-CC-------ChHHHHHhh
Q 011596 295 YKAGNLKSAMNCSYVKDYEFVAIFDADFQ-PNPDFLRRTVPHFKDNEELGLVQARWSFVNK-DE-------NLLTRLQDI 365 (482)
Q Consensus 295 ~Ka~aln~al~~~~~a~~d~Vl~lDaD~~-~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~-~~-------~~~~~~~~~ 365 (482)
|++.|+|.|++ .+++|||+++|+|+. ++|++|.+++..+.++|++++|+|....... +. ....+....
T Consensus 118 G~~~a~n~g~~---~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (329)
T 3ckj_A 118 GKGEALWRSLA---ASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGGGRVTEL 194 (329)
T ss_dssp SHHHHHHHHHH---HCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------CHHHHH
T ss_pred CHHHHHHHHHH---hCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCCCceehh
Confidence 59999999999 689999999999999 8999999999997778999999997654321 10 111111110
Q ss_pred hhhhhhhhhhhhccccccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHH-CCCc-EEEeccceecc
Q 011596 366 NLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHL-RGWK-FIFLNDVECQC 437 (482)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~-~G~k-i~~~~~~~~~~ 437 (482)
... .................|+++++||++++++| |++ ...||.++..++.+ .|++ +..++.....+
T Consensus 195 ~~~---~~~~~~~~~~~~~~~~~~g~~~~rr~~l~~i~-f~~-~~~~D~~l~~r~~~~~g~~~i~~v~~~~r~h 263 (329)
T 3ckj_A 195 VAR---PLLAALRPELGCILQPLGGEYAATRELLTSVP-FAP-GYGVEIGLLVDTFDRLGLDAIAQVNLGVREH 263 (329)
T ss_dssp THH---HHHHHHCGGGGGCSCTTCSCEEEEHHHHTTSC-BCC-GGGHHHHHHHHHHHHHCGGGEEEEEEEECEE
T ss_pred hHH---HHHHHhhhhhccccCCCccceeeeHHHHHhCC-CCC-CCcccHHHHHHHHHhcCCccEeeecceEEec
Confidence 000 00000001111222346778899999999996 755 46799999999987 6775 77777655333
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.82 E-value=7.6e-22 Score=217.97 Aligned_cols=200 Identities=12% Similarity=0.117 Sum_probs=0.0
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCcccc
Q 011596 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299 (482)
Q Consensus 220 ~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~a 299 (482)
+|+|||+||+||+++.|++||+|+++|+|++ +||+||||+|+|.+.+++++..++++ .++++ ...+.+. |.+++
T Consensus 1 Mp~vSVIIp~yN~~~~L~~~L~Sll~Qt~~~--~EIIVVDDgStD~t~~il~~~~~~~~-~~i~~--i~~~~n~-G~~~a 74 (729)
T 3l7i_A 1 MNKLTIIVTYYNAEEYITGCLESIKQQRTQD--FNLIIVNDGSTDQSKKLMDEAIKDYD-KNIRF--IDLDENS-GHAHA 74 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCHHHHHHHHHHHHhCCCCC--eEEEEEECCCCCcHHHHHHHHHHhCC-CCEEE--EECCCCC-CHHHH
Confidence 4789999999999999999999999999986 77999999999999999887766432 23443 3333344 49999
Q ss_pred HHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhcc
Q 011596 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNG 379 (482)
Q Consensus 300 ln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (482)
+|.|++ .++||||+++|+|+.++|++|++++..+. ++++. .+.......+............. ..........
T Consensus 75 rN~gi~---~A~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~v--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 147 (729)
T 3l7i_A 75 RNIALE---EVETPYFMFLDADDELASYAITFYLEKFN-NTDGL--IAPIHSFTTQRPQFVDLDRVRVE-YFNAKENINS 147 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHH---hccCCEEEEECCCCCCChhHHHHHHHHhc-CCCEE--EEeeEEeecCCCccccccceeee-eecchhhHHH
Confidence 999999 68999999999999999999999999998 45443 33322222211111111111100 0000000001
Q ss_pred ccccccccccceEeeeHHHHHHcC-CCCCC-CchhHHHHHHHHHHCCCcEEEe-cccee
Q 011596 380 VFINFFGFNGTAGVWRIKALEDSG-GWMER-TTVEDMDIAVRAHLRGWKFIFL-NDVEC 435 (482)
Q Consensus 380 ~~~~~~~~~G~~~~~Rr~~l~~iG-gf~~~-~~~ED~~l~~rl~~~G~ki~~~-~~~~~ 435 (482)
. .....++++++||++++++| +|++. ...||.+++.++..+|+++.++ +.+..
T Consensus 148 ~---~~~~~~~~~~~rr~~l~~~gl~fde~~~~~ED~d~~~rl~~~g~~i~~~~~~~~~ 203 (729)
T 3l7i_A 148 F---LRKQSACNIIFRTAIVRAHHIRFNENLNTYVDWSFVLEYMKYVNKFVRIFNFPFY 203 (729)
T ss_dssp -----------------------------------------------------------
T ss_pred H---hhccchhheeeeHHHHHHcCCCcCCCCCcccCHHHHHHHHHhcCCEEEecCcEEE
Confidence 1 11246778999999999999 89887 4789999999999999999999 55553
No 12
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.81 E-value=4.7e-19 Score=180.69 Aligned_cols=199 Identities=14% Similarity=0.055 Sum_probs=140.7
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHh--CCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEe----ccCCC
Q 011596 220 FPMVLVQIPMCNEKEVYQQSIAAVCN--LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRH----RILRD 293 (482)
Q Consensus 220 ~P~VsViIP~yne~~~l~~tL~Sll~--q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~----~~~~~ 293 (482)
.|+|||+||+|||++.|.++|+|+.+ |+|+. .++|+||||+|+|.|.+++++. +.+++... +...+
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~-~~EIIVVDDgStD~T~~i~~~~-------~~~v~~~~~~~i~~~~n 164 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAPL-IDQILVVDADSEDGTAGVAASH-------GAEVYSENELMSGYGDA 164 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCC-CSEEEEEECSCSSSHHHHHHHT-------TCEEEEGGGTTGGGCSC
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCC-CeEEEEEcCcCCccHHHHHHHh-------CchhcccceeEecCCcc
Confidence 57899999999999999999999987 46653 3689999999999998888743 33433211 12334
Q ss_pred CCccccHHHHhhhcccCCceEEEEEcCCCC-CChHHHHHHHHHhhcCCCeEEEeeeeeeecCC--------CChHHHHHh
Q 011596 294 GYKAGNLKSAMNCSYVKDYEFVAIFDADFQ-PNPDFLRRTVPHFKDNEELGLVQARWSFVNKD--------ENLLTRLQD 364 (482)
Q Consensus 294 g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~-~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~--------~~~~~~~~~ 364 (482)
.||+.|+|.|++ .+++|||+++|+|+. ++|++|.+++..+.++|++++|.|........ .+...++..
T Consensus 165 ~G~g~A~n~G~~---~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~~~~g~v~~~~~ 241 (387)
T 3f1y_A 165 HGKGDAMWRALS---VTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEEDGGGRVTELTA 241 (387)
T ss_dssp CSHHHHHHHHTT---TCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CCBCCSHHHHHTH
T ss_pred CCHHHHHHHHHH---hcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccccccCCchhhhhH
Confidence 459999999999 689999999999999 89999999999998788999999875332111 111111110
Q ss_pred hhhhhhhhhhhhhccccccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHH-HCCCc-EEEeccceecc
Q 011596 365 INLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAH-LRGWK-FIFLNDVECQC 437 (482)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~-~~G~k-i~~~~~~~~~~ 437 (482)
.. ...........+....+.+.++||++++++ +|.+ .+..|.++..++. +.|++ +..+|-....+
T Consensus 242 ~~------l~~~~~~~l~~~~d~~sG~~a~rR~~l~~i-~f~~-gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h 308 (387)
T 3f1y_A 242 KP------LFNLFYPELAGFVQPLAGEFVADRELFCSI-PFLT-GYAVETGIMIDVLKKVGLGAMAQVDLGERQN 308 (387)
T ss_dssp HH------HHHHHCGGGTTCSCTTCSCEEEEHHHHTTS-CEEC-STTHHHHHHHHHHHHHCGGGEEEEEEEECCC
T ss_pred HH------HHHHHhHhhccccccccccEEEEHHHHHhC-CCCC-CcchHHHHHHHHHHhcCCCeEEEEecceeec
Confidence 00 000000000112223577889999999999 6754 5778899988885 55987 99888776433
No 13
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.76 E-value=4.5e-18 Score=163.40 Aligned_cols=184 Identities=10% Similarity=-0.024 Sum_probs=123.7
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
..+.+||| |+||+++.+++||+|+.++......+|||||||+|+|. . +.+.
T Consensus 14 ~~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~~EiIVVDn~s~d~---------------------------~-g~a~ 64 (249)
T 2nxv_A 14 STLMFSVC-SLVRDQAKYDRLLESFERFGFTPDKAEFLAADNREGNQ---------------------------F-HGFS 64 (249)
T ss_dssp CCCSEEEE-EEESCHHHHHHHHHHHHHTTCCTTTEEEEEEECTTSCS---------------------------C-CTTT
T ss_pred CcceEEEE-EeeCCHHHHHHHHHHHHHhccCCCcEEEEEEECCCCCc---------------------------c-cHHH
Confidence 35689974 67999999999999876532222128899999988641 1 2678
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhc----CCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhh
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKD----NEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVE 374 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~----~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 374 (482)
++|.|++ .+++||++|+|+|+.++|++|++++..+++ +|++++++............. ..............
T Consensus 65 a~N~Gi~---~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~~~~~~~~~g~~~-~~~~~~~~~~~~~~ 140 (249)
T 2nxv_A 65 WHKQMLP---RCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPLNHSV-TAQALHISDVFGND 140 (249)
T ss_dssp HHHHHGG---GCCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEESEEEESSCSCTTS-CCCEEEEEETTEEE
T ss_pred HHHHHHH---hcCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEeecccccCCCCcee-eecccccCCccccc
Confidence 8999999 689999999999999999999999999986 499988865432222111000 00000000000000
Q ss_pred hhhccccccccccccceEeeeHHHHHHcCCCCCC---CchhHHHHHHHHHHCCCcEEEeccceecccC
Q 011596 375 QQVNGVFINFFGFNGTAGVWRIKALEDSGGWMER---TTVEDMDIAVRAHLRGWKFIFLNDVECQCEL 439 (482)
Q Consensus 375 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~---~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~ 439 (482)
.........+..+.|+++++||++ .|||++. ...||.|+++|+.++|+++.+.|.. ++|..
T Consensus 141 ~~~~~~~~~v~~~~g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~~-v~H~~ 204 (249)
T 2nxv_A 141 RRRGNVPCRVESLDECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDFH-LHHYG 204 (249)
T ss_dssp EEESCSSEEEEEECTTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCCC-CEECC
T ss_pred cccCCCceEcCeeeeEeeEEEHhh---hCCCCCCCCCcceehhHHHHHHHHcCCeEEEeccE-EEECC
Confidence 000011112233579999999999 6889874 2358999999999999999999865 44443
No 14
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.75 E-value=6.5e-19 Score=172.48 Aligned_cols=178 Identities=16% Similarity=0.164 Sum_probs=126.3
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHH---hCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCC
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVC---NLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll---~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~ 295 (482)
..|+||||||+||+++.|.++|+|+. +|+|++ ++|+|+||++|+. - +
T Consensus 63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~~--~EIiVVdds~d~~---------------------------f-~ 112 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLD--YGIYVINQAGDTI---------------------------F-N 112 (287)
T ss_dssp CSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCE--EEEEEEEECSSSC---------------------------C-C
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcCC--ceEEEEEeCCCCc---------------------------c-c
Confidence 36899999999999999999999999 688875 7899999965421 0 2
Q ss_pred ccccHHHHh----hhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhh
Q 011596 296 KAGNLKSAM----NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHF 371 (482)
Q Consensus 296 Ka~aln~al----~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~ 371 (482)
++.++|.|+ + .+++|||+|+|+|+++.|++.... ....|.. .. ..... .. +
T Consensus 113 ~a~a~N~G~~~al~---~A~gd~i~flD~D~i~~~d~~~~~---~~~~p~~---------~~---~~~~~---~~----~ 167 (287)
T 2fy7_A 113 RAKLLNVGFQEALK---DYDYTCFVFSDVDLIPMNDHNAYR---CFSQPRH---------IS---VAMDK---FG----F 167 (287)
T ss_dssp HHHHHHHHHHHHHH---HSCCCEEEEECTTEEESBTTSCCS---CCSSCEE---------CC---CEEGG---GT----T
T ss_pred hhhhhhhHHHHHHH---hCCCCEEEEECCCcccCCCcceEe---cCCCCce---------EE---Eeecc---cc----c
Confidence 567788888 5 689999999999999999962100 0011110 00 00000 00 0
Q ss_pred hhhhhhccccccccccccceEeeeHHHHHHcCCCCCCCc---hhHHHHHHHHHHCCCcEEEec-----cceecc------
Q 011596 372 EVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLN-----DVECQC------ 437 (482)
Q Consensus 372 ~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~---~ED~~l~~rl~~~G~ki~~~~-----~~~~~~------ 437 (482)
. .....+.|+++++||++++++|||++... .||.|++.|+..+|+++...+ ....+|
T Consensus 168 ~---------~~~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~ 238 (287)
T 2fy7_A 168 S---------LPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKN 238 (287)
T ss_dssp S---------CSSTTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC-------
T ss_pred C---------CCcCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCccc
Confidence 0 01123578999999999999999998744 499999999999999998443 333322
Q ss_pred -cCCcCHHHHHHHHHhhhhhhHHH
Q 011596 438 -ELPESYEAYRKQQHRWHSGPMQL 460 (482)
Q Consensus 438 -~~p~t~~~~~~qr~RW~~G~~q~ 460 (482)
..|+.++...+|+.||+.+.+..
T Consensus 239 ~~n~~~~~~l~~~~~~~~~~Gl~~ 262 (287)
T 2fy7_A 239 EPNPQRFDRIAHTKETMLSDGLNS 262 (287)
T ss_dssp --CCCCCCCHHHHHHHTTTSSGGG
T ss_pred CCCHHHHHHHhhcccEEcCCCccc
Confidence 24667788889999999886654
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.60 E-value=1.2e-14 Score=147.93 Aligned_cols=198 Identities=12% Similarity=0.060 Sum_probs=127.5
Q ss_pred EEEeecCCchHHHHHHHHHHHh-CCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhh-hCCCeEEEEecc--C-CCCCccc
Q 011596 224 LVQIPMCNEKEVYQQSIAAVCN-LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQ-EAGANIVYRHRI--L-RDGYKAG 298 (482)
Q Consensus 224 sViIP~yne~~~l~~tL~Sll~-q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~-~~~v~vv~~~~~--~-~~g~Ka~ 298 (482)
.||||++|| .+..+++++.. +.+|. +||+||||||+|.|.++++++.++.+ ..+++++..... . .+.||+.
T Consensus 3 lVIiP~~eE--~I~~vl~~l~~~~~~~~--~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~ 78 (397)
T 2bo4_A 3 LVVFPFKHE--HPEVLLHNVRVAAAHPR--VHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGD 78 (397)
T ss_dssp EEEEECCSS--CHHHHHHHHHHHHHSTT--CCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHH
T ss_pred EEEEeCCcc--CHHHHHHHHHHhccCCC--eEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHH
Confidence 355665543 47777777652 33454 67999999999999999998777665 557776543212 2 0345999
Q ss_pred cHHHHhhhcc-cCCceEEEEEcCCCC-CChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHH-hhhhhhhhhhhh
Q 011596 299 NLKSAMNCSY-VKDYEFVAIFDADFQ-PNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQ-DINLSFHFEVEQ 375 (482)
Q Consensus 299 aln~al~~~~-~a~~d~Vl~lDaD~~-~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~-~~~~~~~~~~~~ 375 (482)
|++.|++.+. .+++|+|+++|||.+ .+|+++.+++..+.+ +.++|.|... .....+...+.. .......+....
T Consensus 79 Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~--g~D~V~g~~~-r~~~~~~~~~~~~~~ll~~~~~~~~ 155 (397)
T 2bo4_A 79 GMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF--GYGLVRHYFP-RASTDAMITWMITRTGFALLWPHTE 155 (397)
T ss_dssp HHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT--TCSEEEEECC-CCTTSCHHHHHTHHHHHHHHCTTSS
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc--CCCEEEEEec-cccCCcHHHHHHHHHHHHHHHHHhh
Confidence 9999993332 689999999999996 899999999998863 4677777422 112223222211 110110111111
Q ss_pred hhccccccccccccceEeeeHHHHHHcCCC----CCCCchhHHHHHHHHHHCCCcEEEeccc
Q 011596 376 QVNGVFINFFGFNGTAGVWRIKALEDSGGW----MERTTVEDMDIAVRAHLRGWKFIFLNDV 433 (482)
Q Consensus 376 ~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf----~~~~~~ED~~l~~rl~~~G~ki~~~~~~ 433 (482)
.. .+.-..+...++||++++++... .....+.|.++..++.++|+++..+|-.
T Consensus 156 ~~-----~i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~fg~eiel~~~a~~~G~rI~EVpig 212 (397)
T 2bo4_A 156 LS-----WIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIP 212 (397)
T ss_dssp GG-----GCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECT
T ss_pred cc-----ccccCCcccEEEeHHHHHHHhhhcccCcCCCcchHHHHHHHHHHcCCEEEEEECc
Confidence 00 11111344558999999987321 2334568999999999999999988743
No 16
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.12 E-value=2.5e-10 Score=111.68 Aligned_cols=104 Identities=21% Similarity=0.119 Sum_probs=74.4
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHH---HHHHHHHHHhhhCCCeEEEEeccC-----
Q 011596 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQ---TLIKEEVLKWQEAGANIVYRHRIL----- 291 (482)
Q Consensus 220 ~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~---~~~~~~~~~~~~~~v~vv~~~~~~----- 291 (482)
..++|||||||||+.. +++++++|.+.+ ++||+|||||.|.+. ++++++... .+.++.++ +..+
T Consensus 52 ~~klSIVVPvYNEe~~---lLesVl~qi~~d--~eIIlVdDGS~D~s~~e~dil~~~~~~-~~~ri~vi--HQkn~gls~ 123 (391)
T 2wvl_A 52 LEQTAIVVPTRNERLK---LLEGVLSGIPHE--ALILVASNSSPDRFQMERDLLEEFAHL-TERPALIF--HQKDPALAE 123 (391)
T ss_dssp HTTEEEEEEESSCCHH---HHHHHHHTSCTT--SEEEEEECCCHHHHHHHHHHHHHHHHH-TTCCEEEE--ETTCHHHHH
T ss_pred HhceEEEEeccCcHHH---HHHHHHhcCCCC--ceEEEEECCCCCChHhHHHHHHHHHhh-cccceEEE--eccChHHHH
Confidence 4679999999999974 699999998765 789999999999984 455555431 12334333 3211
Q ss_pred ----------------CCCCccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHH
Q 011596 292 ----------------RDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRR 331 (482)
Q Consensus 292 ----------------~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~ 331 (482)
.+.||+.++-.|+..+..++++||.|+|||..++.+..+.
T Consensus 124 Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Ey 179 (391)
T 2wvl_A 124 ALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEY 179 (391)
T ss_dssp HHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHH
T ss_pred HHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHH
Confidence 1124888888888843234899999999999997655443
No 17
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=98.91 E-value=3.8e-09 Score=105.14 Aligned_cols=119 Identities=15% Similarity=0.227 Sum_probs=83.8
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEe-------ccCCC
Q 011596 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRH-------RILRD 293 (482)
Q Consensus 221 P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~-------~~~~~ 293 (482)
+.++|+|++||.++ ++++|+|+++|..+....+|+|.||++.+++.++++++. ..+..+... ++.+.
T Consensus 2 ~~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~-----~~I~~~~~~d~~~~~~~~~N~ 75 (343)
T 1fo8_A 2 AVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYG-----SAVTHIRQPDLSNIAVQPDHR 75 (343)
T ss_dssp CCCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTG-----GGSEEEECSCCCCCCCCTTCG
T ss_pred CcccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcC-----CceEEEEcCCccccccchhhc
Confidence 45789999999999 999999999998655567799999999999888776431 123322110 11111
Q ss_pred CCc-----c----ccHHHHhhhcccCCceEEEEEcCCCCCChHHHHH---HHHHhhcCCCeEEEeee
Q 011596 294 GYK-----A----GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRR---TVPHFKDNEELGLVQAR 348 (482)
Q Consensus 294 g~K-----a----~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~---lv~~f~~~p~v~~V~~~ 348 (482)
|.+ + .++|.++. ..++|+++++|+|+.+.||+++- ++..++.|+.+.++++.
T Consensus 76 g~~~y~~ia~h~~~al~~vf~---~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ISa~ 139 (343)
T 1fo8_A 76 KFQGYYKIARHYRWALGQIFH---NFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAW 139 (343)
T ss_dssp GGHHHHHHHHHHHHHHHHHHT---TSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESC
T ss_pred CcccchhHhHHHHHHHHHHHH---hccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEecc
Confidence 110 0 23444444 45799999999999999999854 45555678999888764
No 18
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=98.85 E-value=4.2e-09 Score=105.78 Aligned_cols=109 Identities=20% Similarity=0.211 Sum_probs=70.7
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHH------HHHHHHHHHHhhhCCCeEEEEec-----
Q 011596 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTA------QTLIKEEVLKWQEAGANIVYRHR----- 289 (482)
Q Consensus 221 P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t------~~~~~~~~~~~~~~~v~vv~~~~----- 289 (482)
.++|||||+|||++.+ +..++++- |. ..+||||||+|.|.+ .++++++.... +.+..++....
T Consensus 51 ~~iSVVIP~yNEE~~l---I~~vL~~i-~~-~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~-~~~~~Vl~~~~p~v~~ 124 (394)
T 2zu9_A 51 GKMAVIVPMKNEKLHL---VDGVLKAI-PH-KCPIIIVSNSKREGPNRYKLEVDLIRHFYNLT-HSKIIMIHQKDPGLAK 124 (394)
T ss_dssp TTEEEEEEESSCCHHH---HHHHHHHS-CT-TSCEEEEECCCCSSSCHHHHHHHHHHHHHHHH-CCCEEEEETTCHHHHH
T ss_pred CCEEEEEecCcccHHH---HHHHHHcC-CC-CcEEEEEECcCcccccchhhHHHHHHHHhhcc-ccceEEEecCCcchhH
Confidence 4699999999999654 44444422 22 256899999984444 44555443322 23343333222
Q ss_pred ---------------cCCCCCccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhh
Q 011596 290 ---------------ILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (482)
Q Consensus 290 ---------------~~~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~ 337 (482)
..++ ||+.|+..|+..+...++|+|+++|||. ..|..+.+++..+.
T Consensus 125 ~~~~~g~~~il~~~~~~r~-GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~ 185 (394)
T 2zu9_A 125 AFKEVGYTDILDENGMIRS-GKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDYA 185 (394)
T ss_dssp HHHHHTCCTTBCTTSSBCC-SHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHHH
T ss_pred HhhhccccccccccccccC-ChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhh
Confidence 1134 5999999999842111899999999999 67888877777664
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=97.41 E-value=0.00061 Score=64.71 Aligned_cols=178 Identities=15% Similarity=0.196 Sum_probs=110.0
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHH----hCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCC
Q 011596 220 FPMVLVQIPMCNEKEVYQQSIAAVC----NLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (482)
Q Consensus 220 ~P~VsViIP~yne~~~l~~tL~Sll----~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~ 295 (482)
.-+|.||||-+|.++.|...|.-+. +|.. .+.|+|++...+. +-|
T Consensus 50 ~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l---~y~I~VieQ~~~~-------------------------~FN--- 98 (287)
T 3lw6_A 50 VHKMALLVPFRDRFEELLQFVPHMTAFLKRQGV---AHHIFVLNQVDRF-------------------------RFN--- 98 (287)
T ss_dssp CCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTC---EEEEEEEEECSSS-------------------------CCC---
T ss_pred cceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCC---ceEEEEEecCCCC-------------------------ccc---
Confidence 4589999999999988877776543 4532 4567777753221 111
Q ss_pred ccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhh
Q 011596 296 KAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQ 375 (482)
Q Consensus 296 Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 375 (482)
++.-+|.|+..+ ....|+++|-|.|.++..|... .. .|+. ..+.. ...+ .+ ++
T Consensus 99 Ra~LlNvGf~ea-~~~~d~~ifHDVDLlP~dd~n~-----Y~-c~~~---~~P~H-ls~~--------~~----~~---- 151 (287)
T 3lw6_A 99 RASLINVGFQFA-SDVYDYIAMHDVDLLPLNDNLL-----YE-YPSS---LGPLH-IAGP--------KL----HP---- 151 (287)
T ss_dssp HHHHHHHHHHHS-CTTCCEEEEECTTEEECCTTSC-----CC-CCCT---TCCEE-SSCT--------TT----CS----
T ss_pred hhheecccHHHH-hccCCEEEEecccccccCCCcc-----cc-CCCC---CCceE-Eeec--------cc----cC----
Confidence 556678888753 3458999999999988643211 00 1110 01111 1000 00 00
Q ss_pred hhccccccccccccceEeeeHHHHHHcCCCCCCCc---hhHHHHHHHHHHCCCcEEEeccc-e-----ec--c-------
Q 011596 376 QVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLNDV-E-----CQ--C------- 437 (482)
Q Consensus 376 ~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~---~ED~~l~~rl~~~G~ki~~~~~~-~-----~~--~------- 437 (482)
.....++.|..++++++.+.++|||++... .||.|+..|+..+|+++.-.+.. . .. +
T Consensus 152 -----~~~Y~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~r 226 (287)
T 3lw6_A 152 -----KYHYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKR 226 (287)
T ss_dssp -----SCCCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCC
T ss_pred -----CCCcCCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccCC
Confidence 012233679999999999999999988744 69999999999999998765532 1 11 1
Q ss_pred cCCcCHHHHHHHHHhhhhhhHHH
Q 011596 438 ELPESYEAYRKQQHRWHSGPMQL 460 (482)
Q Consensus 438 ~~p~t~~~~~~qr~RW~~G~~q~ 460 (482)
..+..+.....+++||....+..
T Consensus 227 d~~k~~~~~~~~~~r~~~dGLns 249 (287)
T 3lw6_A 227 DTQKCFNQKEMTRKRDHKTGLDN 249 (287)
T ss_dssp CCCCCTTHHHHHTSCCSSCSGGG
T ss_pred cccchhhhhhhhcEEccCCCCee
Confidence 11233455566777887665544
No 20
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=96.74 E-value=0.0027 Score=56.89 Aligned_cols=103 Identities=14% Similarity=0.123 Sum_probs=64.1
Q ss_pred cCCceEEEEEcCC---CCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhcccccccc
Q 011596 309 VKDYEFVAIFDAD---FQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFF 385 (482)
Q Consensus 309 ~a~~d~Vl~lDaD---~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (482)
..++|+++++||| ...+|+.+.+++ + .+.++|.|.......+ . .+...+ .+. . ... ...+.
T Consensus 51 ~~~~dhllfIDAD~~~I~FdPe~V~rLl---~--~g~DVV~GsYp~K~~~-~-~s~~a~-~y~----~--~i~--~~~V~ 114 (203)
T 2c0n_A 51 MKDYDTLAFLDEDVVPIEIDFQKVEAKF---N--EGYDVVCGYYYLKTLR-G-YSVYRK-DWE----K--EIF--DGEVN 114 (203)
T ss_dssp CTTCCEEEEECTTEEEEECCHHHHHHHH---H--HTCSEEEEECBCTTSS-S-BSEESS-SBC----S--SCC--CEECS
T ss_pred cCCCCEEEEEeCCCCccccCHHHHHHHH---h--CCCCEEEEEeeccCCC-c-cchHHH-HHH----H--hcc--Cceee
Confidence 4678999999999 999999999999 2 2445777764333221 1 000000 000 0 000 01233
Q ss_pred ccccceEeeeHHHHHHcC--CC-------CCCCchhHHHHHHHHHHCCCcE
Q 011596 386 GFNGTAGVWRIKALEDSG--GW-------MERTTVEDMDIAVRAHLRGWKF 427 (482)
Q Consensus 386 ~~~G~~~~~Rr~~l~~iG--gf-------~~~~~~ED~~l~~rl~~~G~ki 427 (482)
.+.+..++++|++++.+- .| ....++||..+...+..+|+.+
T Consensus 115 d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~ 165 (203)
T 2c0n_A 115 GCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYAL 165 (203)
T ss_dssp EECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEE
T ss_pred eccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccccccccc
Confidence 356677889999999983 33 2235789999999999888876
No 21
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=95.94 E-value=0.024 Score=53.78 Aligned_cols=183 Identities=13% Similarity=0.142 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCce
Q 011596 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYE 313 (482)
Q Consensus 234 ~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~d 313 (482)
..+..+++.+.+... ++ |+|+-| ++...+.++ ..++++++.......| ..+ +..+++.....+.|
T Consensus 35 Pli~~~l~~l~~~~i--~~--VvVvt~--~~~i~~~~~-------~~g~~v~~~~~~~~~G-t~~-i~~a~~~l~~~~~d 99 (256)
T 3tqd_A 35 PMIQHVYESAIKSGA--EE--VVIATD--DKRIRQVAE-------DFGAVVCMTSSDHQSG-TER-IAEAAVALGFEDDE 99 (256)
T ss_dssp EHHHHHHHHHHHTTC--SE--EEEEES--CHHHHHHHH-------HTTCEEEECCTTCCSH-HHH-HHHHHHHTTCCTTC
T ss_pred hHHHHHHHHHHhCCC--CE--EEEECC--HHHHHHHHH-------HcCCeEEEeCCCCCCc-HHH-HHHHHHHhCcCCCC
Confidence 478888888887542 23 334333 344444333 4577777643223333 433 56666632113679
Q ss_pred EEEEEcCCC-CCChHHHHHHHHHhhcCCCeEEEeeeeeeec----CCCChHHHHH-hhhhhhhhhh-----hhhhc----
Q 011596 314 FVAIFDADF-QPNPDFLRRTVPHFKDNEELGLVQARWSFVN----KDENLLTRLQ-DINLSFHFEV-----EQQVN---- 378 (482)
Q Consensus 314 ~Vl~lDaD~-~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n----~~~~~~~~~~-~~~~~~~~~~-----~~~~~---- 378 (482)
+++++++|. .++++.+.+++..+.++++.++++......+ .+.+...-.. .-....++.. .+...
T Consensus 100 ~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~d~~g~~l~fsr~pip~~r~~~~~~~ 179 (256)
T 3tqd_A 100 IIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTKVVLNRRNYALYFSHAPIPWGRDTFSDKE 179 (256)
T ss_dssp EEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCEEEECTTSBEEEEESSCSSCCTTTTTCGG
T ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccEEEECCCCEEeEEecCCCCCCCccccccc
Confidence 999999999 6789999999999976554333322211110 0011000000 0000000000 00000
Q ss_pred ccc-ccccccccceEeeeHHHHHHcCCCCCCCchhHHH--HHHHHHHCCCcEEEecc
Q 011596 379 GVF-INFFGFNGTAGVWRIKALEDSGGWMERTTVEDMD--IAVRAHLRGWKFIFLND 432 (482)
Q Consensus 379 ~~~-~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~--l~~rl~~~G~ki~~~~~ 432 (482)
... ......+....+||+++++....+.+. .-|..+ -.+|+..+|+++....-
T Consensus 180 ~~~~~~~~~~~~GiY~y~~~~l~~~~~l~~s-~lE~~e~leqlr~le~G~~i~~~~~ 235 (256)
T 3tqd_A 180 NLQLNGSHYRHVGIYAYRVGFLEEYLSWDAC-PAEKMEALEQLRILWHGGRIHMVVA 235 (256)
T ss_dssp GCCCSSCCEEEEEEEEEEHHHHHHHHHSCCC-HHHHHHTCTTHHHHHTTCCCEEEEC
T ss_pred ccccCCcceEEEEEEEcCHHHHHHHHhCCCC-cccchhhhHHHHHHHCCCeEEEEEe
Confidence 000 001113566789999999997655443 233322 23577889999987653
No 22
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=95.62 E-value=0.047 Score=51.57 Aligned_cols=183 Identities=9% Similarity=0.068 Sum_probs=92.6
Q ss_pred hHHHHHHH-HHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCC
Q 011596 233 KEVYQQSI-AAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (482)
Q Consensus 233 ~~~l~~tL-~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~ 311 (482)
...+..++ +.+.+.. -+++ |+++| ++...+.++ ..++++++.......| . +.+..+++.....+
T Consensus 26 kPli~~~i~~~~~~~~--~~~v-vVvt~---~~~i~~~~~-------~~g~~v~~~~~~~~~G-t-~~i~~a~~~~~~~~ 90 (253)
T 4fcu_A 26 RPMILRVVDQAKKVEG--FDDL-CVATD---DERIAEICR-------AEGVDVVLTSADHPSG-T-DRLSEVARIKGWDA 90 (253)
T ss_dssp EEHHHHHHHHHHTCTT--CCEE-EEEES---CHHHHHHHH-------TTTCCEEECCTTCCCH-H-HHHHHHHHHHTCCT
T ss_pred eEhHHHHHHHHHHhcC--CCEE-EEECC---HHHHHHHHH-------HcCCeEEEeCCCCCCh-H-HHHHHHHHhcCcCC
Confidence 35888888 8877643 2343 33443 244433332 4567776542222233 2 34666666421125
Q ss_pred ceEEEEEcCCC-CCChHHHHHHHHHhhcCCCeEE--Eeeeee----eecCCC-ChHH--HHHhhhhhhh-hhhhhhhccc
Q 011596 312 YEFVAIFDADF-QPNPDFLRRTVPHFKDNEELGL--VQARWS----FVNKDE-NLLT--RLQDINLSFH-FEVEQQVNGV 380 (482)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p~v~~--V~~~~~----~~n~~~-~~~~--~~~~~~~~~~-~~~~~~~~~~ 380 (482)
.|+++++++|. .++++.+.+++..+.++++..+ +..+.. ..++.. .... ......+... ....+.....
T Consensus 91 ~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~~~~~~~~~~p~~~kvv~d~~g~~l~fsr~~ip~~r~~~~~ 170 (253)
T 4fcu_A 91 DDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEALYFSRATIPYDRDGAKR 170 (253)
T ss_dssp TCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTSCEEEECTTSBEEEEESSCCSCCTTTSSS
T ss_pred CCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEEcCCHHHccCCCccEEEECCCCeEEEecCCCCCCCCCcccc
Confidence 69999999999 6789999999999976654332 222210 111111 0000 0000000000 0000000000
Q ss_pred ---c-ccccccccceEeeeHHHHHHcCCCCCCCchhH--HHHHHHHHHCCCcEEEec
Q 011596 381 ---F-INFFGFNGTAGVWRIKALEDSGGWMERTTVED--MDIAVRAHLRGWKFIFLN 431 (482)
Q Consensus 381 ---~-~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED--~~l~~rl~~~G~ki~~~~ 431 (482)
. ....-.+....+||++.+++.....+. --|- ..-.+|+..+|+++....
T Consensus 171 ~~~~~~~~~~~~~GiY~f~~~~l~~~~~~~~~-~le~~e~le~lr~l~~G~~I~~~~ 226 (253)
T 4fcu_A 171 DEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMG-KLEKLESLEQLRVLENGHRIAIAV 226 (253)
T ss_dssp SSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCC-HHHHHHTCTTHHHHHTTCCEEEEE
T ss_pred cccccccceeEEEEEEEeCHHHHHHHHhCCCC-cccchhHHHHHHHHHCCCceEEEE
Confidence 0 011113666789999999998765443 2222 222346678999987654
No 23
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=95.33 E-value=0.073 Score=49.77 Aligned_cols=103 Identities=15% Similarity=0.148 Sum_probs=67.3
Q ss_pred CCeEEEEeecCCch---HHHHHHHHHHHhCCCCCCceEEEEEcCCC--CHHHHHHHHHHHHHhhhCCCeEEEEeccCC--
Q 011596 220 FPMVLVQIPMCNEK---EVYQQSIAAVCNLDWPKSKILIQVLDDSD--DPTAQTLIKEEVLKWQEAGANIVYRHRILR-- 292 (482)
Q Consensus 220 ~P~VsViIP~yne~---~~l~~tL~Sll~q~yp~~~~~IiVvDdss--dd~t~~~~~~~~~~~~~~~v~vv~~~~~~~-- 292 (482)
+|.+-||.|+|... ..|.+.-..+ .+ -|+ +.-|||+|+. ++.+.++++ ..|+...+..-..+
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL-~~-Vp~--L~WIVVEd~~~~t~~va~lL~-------~sgl~y~HL~~~~p~~ 70 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAELTRMANTL-LH-VPN--LHWLVVEDAPRRTPLTARLLR-------DTGLNYTHLHVETPRN 70 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHH-TT-SSS--EEEEEEESSSSCCHHHHHHHH-------HHCCEEEEEECCCCHH
T ss_pred CCEEEEEeCCCCccchhHHHHHHhhhh-cc-CCc--eEEEEEeCCCCCCHHHHHHHH-------HcCCceEEeecCCCcc
Confidence 68999999999997 3333333333 22 354 6677899854 677777776 56777666543311
Q ss_pred ---------CCC--ccccHHHHhhhccc------CCceEEEEEcCCCCCChHHHHHHH
Q 011596 293 ---------DGY--KAGNLKSAMNCSYV------KDYEFVAIFDADFQPNPDFLRRTV 333 (482)
Q Consensus 293 ---------~g~--Ka~aln~al~~~~~------a~~d~Vl~lDaD~~~~pd~L~~lv 333 (482)
... -..+.|.|++.+.. ...-+|.|.|+|...+-+..++|-
T Consensus 71 ~~~~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~emR 128 (253)
T 1v84_A 71 YKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMR 128 (253)
T ss_dssp HHCC-------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHHH
T ss_pred ccccccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHHh
Confidence 010 12368888886521 235799999999999988877744
No 24
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=95.30 E-value=0.16 Score=47.93 Aligned_cols=103 Identities=13% Similarity=0.130 Sum_probs=65.3
Q ss_pred CCCeEEEEeecCCchH---HHHHHHHHHHhCCCCCCceEEEEEcCC--CCHHHHHHHHHHHHHhhhCCCeEEEEeccCCC
Q 011596 219 FFPMVLVQIPMCNEKE---VYQQSIAAVCNLDWPKSKILIQVLDDS--DDPTAQTLIKEEVLKWQEAGANIVYRHRILRD 293 (482)
Q Consensus 219 ~~P~VsViIP~yne~~---~l~~tL~Sll~q~yp~~~~~IiVvDds--sdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~ 293 (482)
..|.|-||.|+|.... .|.+.-..+ .+ .|+ +.-|||+|+ ..+.+.++++ ..|+...+..-..+.
T Consensus 19 ~~p~IivVTPTy~R~~Q~a~LtRLa~TL-~~-Vp~--L~WIVVEd~~~~t~~va~lL~-------rsGl~y~HL~~~~p~ 87 (281)
T 3cu0_A 19 SHMTIYVVTPTYARLVQKAELVRLSQTL-SL-VPR--LHWLLVEDAEGPTPLVSGLLA-------ASGLLFTHLVVLTPK 87 (281)
T ss_dssp --CEEEEEEEECCSTTHHHHHHHHHHHH-TT-SSS--EEEEEEESSSSCCHHHHHHHH-------HHCSEEEEEECCCC-
T ss_pred CCCeEEEEeCCCCCcchhHHHHHHHHHH-hc-CCc--eEEEEEcCCCCCCHHHHHHHH-------HcCCceEEeccCCCc
Confidence 6899999999999972 333332333 22 254 667789986 3677777776 567776665443222
Q ss_pred CCc-------------cccHHHHhhhcc--------cC------CceEEEEEcCCCCCChHHHHHH
Q 011596 294 GYK-------------AGNLKSAMNCSY--------VK------DYEFVAIFDADFQPNPDFLRRT 332 (482)
Q Consensus 294 g~K-------------a~aln~al~~~~--------~a------~~d~Vl~lDaD~~~~pd~L~~l 332 (482)
..+ ..+.|.|++.+. .. ..-+|.|.|+|...+-+..++|
T Consensus 88 ~~~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFdem 153 (281)
T 3cu0_A 88 AQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 153 (281)
T ss_dssp ----------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred cccccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHHh
Confidence 211 245888987653 11 2468999999999998877763
No 25
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=94.77 E-value=0.24 Score=46.07 Aligned_cols=103 Identities=10% Similarity=0.099 Sum_probs=65.2
Q ss_pred CCeEEEEeecCCch---HHHHHHHHHHHhCCCCCCceEEEEEcCCCC--HHHHHHHHHHHHHhhhCCCeEEEEeccCCCC
Q 011596 220 FPMVLVQIPMCNEK---EVYQQSIAAVCNLDWPKSKILIQVLDDSDD--PTAQTLIKEEVLKWQEAGANIVYRHRILRDG 294 (482)
Q Consensus 220 ~P~VsViIP~yne~---~~l~~tL~Sll~q~yp~~~~~IiVvDdssd--d~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g 294 (482)
+|.+-||.|+|... ..|.+.-..+. + -|+ +.-|||+|+.. +.+.++++ ..|+...+..-..+..
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~-~-Vp~--l~WIVVEd~~~~~~~v~~lL~-------~sgl~y~HL~~~~~~~ 70 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAELTRLANTFR-Q-VAQ--LHWILVEDAAARSELVSRFLA-------RAGLPSTHLHVPTPRR 70 (246)
T ss_dssp CCCEEEEEEECCSTTHHHHHHHHHHHHT-T-STT--EEEEEEESSSSCCHHHHHHHH-------HSCSCEEEEECCCCCC
T ss_pred CCEEEEEeCCCCccchhHHHHHHHHHHh-c-CCc--eEEEEEcCCCCCCHHHHHHHH-------HcCCceEEEecCCccc
Confidence 68899999999997 23333333333 2 354 66778888653 44566665 6788766654332111
Q ss_pred Cc-------cccHHHHhhhccc------CCceEEEEEcCCCCCChHHHHHHH
Q 011596 295 YK-------AGNLKSAMNCSYV------KDYEFVAIFDADFQPNPDFLRRTV 333 (482)
Q Consensus 295 ~K-------a~aln~al~~~~~------a~~d~Vl~lDaD~~~~pd~L~~lv 333 (482)
+| ..+.|.|++.+.. ...-+|.|.|+|...+-+..+++-
T Consensus 71 ~~~~~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~emR 122 (246)
T 2d0j_A 71 YKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEMR 122 (246)
T ss_dssp ----CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHHT
T ss_pred cCCCCCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHHh
Confidence 11 2567888876421 134799999999999887777643
No 26
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=94.00 E-value=0.24 Score=46.98 Aligned_cols=177 Identities=10% Similarity=0.093 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCce
Q 011596 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYE 313 (482)
Q Consensus 234 ~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~d 313 (482)
..+..+++.+.+... +++ +|+-| ++...+.++ ..++++++.... ..+|..+ +..+++.....+.|
T Consensus 44 Pmi~~~l~~l~~~~i--~~I--vV~t~--~~~i~~~~~-------~~g~~v~~~~~~-~~~Gt~~-i~~~~~~l~~~~~d 108 (264)
T 3k8d_A 44 PMIVHVLERARESGA--ERI--IVATD--HEDVARAVE-------AAGGEVCMTRAD-HQSGTER-LAEVVEKCAFSDDT 108 (264)
T ss_dssp EHHHHHHHHHHHTTC--SEE--EEEES--CHHHHHHHH-------HTTCEEEECCTT-CCSHHHH-HHHHHHHHTCCTTC
T ss_pred EHHHHHHHHHHhCCC--CEE--EEECC--HHHHHHHHH-------HcCCEEEEecCC-CCCCHHH-HHHHHHHhccCCCC
Confidence 488888888887652 343 33333 344433332 456777654222 2333433 55666532123679
Q ss_pred EEEEEcCCC-CCChHHHHHHHHHhhcCC-CeEEEeeeee------------e-ecCCCChHHHHHhhhhh-hhhhhhhh-
Q 011596 314 FVAIFDADF-QPNPDFLRRTVPHFKDNE-ELGLVQARWS------------F-VNKDENLLTRLQDINLS-FHFEVEQQ- 376 (482)
Q Consensus 314 ~Vl~lDaD~-~~~pd~L~~lv~~f~~~p-~v~~V~~~~~------------~-~n~~~~~~~~~~~~~~~-~~~~~~~~- 376 (482)
+++++++|. .++++.+++++..+.+.. ++..+..+.. . .+.+.... .+.-. .-+.....
T Consensus 109 ~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~~~p~~vkVv~d~~g~~l----~fsr~~ip~~r~~~~ 184 (264)
T 3k8d_A 109 VIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYAL----YFSRATIPWDRDRFA 184 (264)
T ss_dssp EEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECCSHHHHTCTTSCEEEECTTSBEE----EEESSCCSCCHHHHH
T ss_pred EEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcCCHHHccCCCceEEEECCCCeEE----EEecCCCCCCCcccc
Confidence 999999999 668999999999987422 2333333221 0 11111100 00000 00000000
Q ss_pred hcc-ccccccccccceEeeeHHHHHHcCCCCCCCchhHHH--HHHHHHHCCCcEEEe
Q 011596 377 VNG-VFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMD--IAVRAHLRGWKFIFL 430 (482)
Q Consensus 377 ~~~-~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~--l~~rl~~~G~ki~~~ 430 (482)
... ......-.+....+||++++++.-...+. ..|..+ -.+|+..+|+++...
T Consensus 185 ~~~~~~~~~~~~~~GiY~y~~~~l~~~~~~~~~-~lE~~e~leqlr~le~G~~I~~~ 240 (264)
T 3k8d_A 185 EGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPS-PLEHIEMLEQLRVLWYGEKIHVA 240 (264)
T ss_dssp HCSSCCCSCCEEECSEEEEEHHHHHHHHHSCCC-HHHHHHTCTTHHHHHTTCCEEEE
T ss_pred ccccccCCcceEEEEEEEECHHHHHHHHhCCCC-hhhhHHHHHHHHHHHCCCceEEE
Confidence 000 00011124667889999999987554432 233221 235778999999875
No 27
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=93.48 E-value=0.25 Score=46.31 Aligned_cols=91 Identities=12% Similarity=0.137 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCce
Q 011596 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYE 313 (482)
Q Consensus 234 ~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~d 313 (482)
..+..+++.+.+... +++ |+++| ++...+.++ +.++++++.......| .++ +..+++.....+.|
T Consensus 28 Pli~~~l~~l~~~~~--~~i-vVv~~---~~~i~~~~~-------~~g~~v~~~~~~~~~G-t~~-~~~~~~~l~~~~~d 92 (252)
T 3oam_A 28 PMIQWVYEQAMQAGA--DRV-IIATD---DERVEQAVQ-------AFGGVVCMTSPNHQSG-TER-LAEVVAKMAIPADH 92 (252)
T ss_dssp EHHHHHHHHHHHTTC--SEE-EEEES---CHHHHHHHH-------HTTCEEEECCTTCCSH-HHH-HHHHHHHTTCCTTS
T ss_pred EHHHHHHHHHHhCCC--CeE-EEECC---HHHHHHHHH-------HcCCEEEEcCCCCCCc-HHH-HHHHHHhcCcCCCC
Confidence 588888888887652 344 33443 344433332 4577877653333333 444 44455421113579
Q ss_pred EEEEEcCCC-CCChHHHHHHHHHhhcC
Q 011596 314 FVAIFDADF-QPNPDFLRRTVPHFKDN 339 (482)
Q Consensus 314 ~Vl~lDaD~-~~~pd~L~~lv~~f~~~ 339 (482)
.++++++|. .++++.+.+++..+.++
T Consensus 93 ~vlv~~gD~Pli~~~~i~~l~~~~~~~ 119 (252)
T 3oam_A 93 IVVNVQGDEPLIPPAIIRQVADNLAAC 119 (252)
T ss_dssp EEEECCTTCTTCCHHHHHHHHHHHHHS
T ss_pred EEEEEeCCeeecCHHHHHHHHHHHHhc
Confidence 999999999 67899999999988753
No 28
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=92.18 E-value=0.81 Score=43.80 Aligned_cols=117 Identities=6% Similarity=0.051 Sum_probs=72.5
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCcccc
Q 011596 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299 (482)
Q Consensus 220 ~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~a 299 (482)
....+|+|-+|+..+.+.+.|..+.+..+=. ++.|+-.+....+.. ... ...+...+.+.++.... + .
T Consensus 27 ~~~FTvvi~ty~R~~~L~~lv~~~~~~~~v~-~IvVvWn~~~~~pp~-~~~----~~~~~~~vpv~v~~~~~-n-----s 94 (293)
T 1omz_A 27 LDSFTLIMQTYNRTDLLLRLLNHYQAVPSLH-KVIVVWNNVGEKGPE-ELW----NSLGPHPIPVIFKPQTA-N-----K 94 (293)
T ss_dssp TTCEEEEEEESSCHHHHHHHHHHHTTSTTEE-EEEEEECCTTCCCTH-HHH----HHTCCCSSCEEEEECSS-C-----C
T ss_pred CCceEEEEEeecccHHHHHHHHHHhcCCCCC-eEEEEeCCCCCCCCh-hhc----cccCCCCccEEEEeCCC-C-----c
Confidence 4479999999999999999998876654322 333333333222221 111 11222346666553221 1 2
Q ss_pred HHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeee
Q 011596 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARW 349 (482)
Q Consensus 300 ln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~ 349 (482)
+|.=+.-.-.-+.|-|+.+|+|..++.+.|+.......++|+ -+|+...
T Consensus 95 LnnRF~p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~Pd-RlVGf~~ 143 (293)
T 1omz_A 95 MRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPD-QIIGFVP 143 (293)
T ss_dssp GGGGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTT-SEEESCE
T ss_pred hhhccCCCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCcc-ceecCch
Confidence 343332112457899999999999999999999999988887 3555543
No 29
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=88.68 E-value=5.7 Score=36.04 Aligned_cols=93 Identities=13% Similarity=0.126 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEecc--CCCCCccccHHHHhhhcccC
Q 011596 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI--LRDGYKAGNLKSAMNCSYVK 310 (482)
Q Consensus 233 ~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~--~~~g~Ka~aln~al~~~~~a 310 (482)
...+..+++.+.+...- ++ |+|+-+ ++...+.++ ..++.++..... ....+..+++..|++. ..
T Consensus 28 kpli~~~i~~~~~~~~~-~~--ivv~~~--~~~i~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~v~~al~~--~~ 93 (229)
T 1qwj_A 28 VPLIGWVLRAALDAGVF-QS--VWVSTD--HDEIENVAK-------QFGAQVHRRSSETSKDSSTSLDAIVEFLNY--HN 93 (229)
T ss_dssp EEHHHHHHHHHHHHTCC-SE--EEEEES--CHHHHHHHH-------HTTCEEEECCGGGSSTTCCHHHHHHHHHTT--CT
T ss_pred EEHHHHHHHHHHhCCCc-CE--EEEECC--hHHHHHHHH-------HcCCEEEeChhhhcCCCCcHHHHHHHHHHh--cC
Confidence 35888888888775421 23 333332 333333332 346776533211 1111123556677763 23
Q ss_pred CceEEEEEcCCC-CCChHHHHHHHHHhhcC
Q 011596 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKDN 339 (482)
Q Consensus 311 ~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~ 339 (482)
+.|+++++++|. .++++.+.+++..+..+
T Consensus 94 ~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~ 123 (229)
T 1qwj_A 94 EVDIVGNIQATSPCLHPTDLQKVAEMIREE 123 (229)
T ss_dssp TCSEEEEECTTCTTCCHHHHHHHHHHHHSS
T ss_pred CCCEEEEecCCCCcCCHHHHHHHHHHHHhC
Confidence 679999999999 46899999999988654
No 30
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=88.10 E-value=2.5 Score=37.16 Aligned_cols=90 Identities=13% Similarity=0.134 Sum_probs=54.1
Q ss_pred chHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCC
Q 011596 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (482)
Q Consensus 232 e~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~ 311 (482)
....+..+++.+.+... ++ |+|+-+...+...+.+ ...++++++. +....+..+++..|++.. ..+
T Consensus 30 g~pll~~~l~~l~~~~~--~~--i~vv~~~~~~~~~~~~-------~~~~~~~~~~--~~~~~g~~~~i~~al~~~-~~~ 95 (197)
T 2wee_A 30 DTTVLGATLDVARQAGF--DQ--LILTLGGAASAVRAAM-------ALDGTDVVVV--EDVERGCAASLRVALARV-HPR 95 (197)
T ss_dssp TEEHHHHHHHHHHHTTC--SE--EEEEECTTHHHHHHHS-------CCTTSEEEEC--C----CCHHHHHHHHTTS-CTT
T ss_pred CccHHHHHHHHHHhcCC--Cc--EEEEeCCCHHHHHHHh-------ccCCCEEEEC--CCcccCHHHHHHHHHHHh-ccc
Confidence 34688889998887542 23 3344332223222211 1346766542 212223667788888742 125
Q ss_pred ceEEEEEcCCC-CCChHHHHHHHHH
Q 011596 312 YEFVAIFDADF-QPNPDFLRRTVPH 335 (482)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~ 335 (482)
.|+++++++|. .++++.+++++..
T Consensus 96 ~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 96 ATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp EEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 79999999999 5689999999987
No 31
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=88.08 E-value=3.8 Score=35.92 Aligned_cols=90 Identities=12% Similarity=0.050 Sum_probs=55.9
Q ss_pred chHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCC
Q 011596 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (482)
Q Consensus 232 e~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~ 311 (482)
....+..+++.+.+... ++ |+|+-+...+...+.+ ...++++++. +....+..+++..|++.. ..+
T Consensus 30 g~pli~~~l~~l~~~~~--~~--i~vv~~~~~~~~~~~~-------~~~~~~~~~~--~~~~~g~~~~i~~al~~~-~~~ 95 (199)
T 2waw_A 30 DTTLLGATLAMARRCPF--DQ--LIVTLGGAADEVLEKV-------ELDGLDIVLV--DDAGLGCSSSLKSALTWV-DPT 95 (199)
T ss_dssp TEEHHHHHHHHHHTSSC--SE--EEEEECTTHHHHHHHS-------CCTTSEEEEC--CCCCTTCCCHHHHHHHTS-CTT
T ss_pred ccCHHHHHHHHHHhCCC--Cc--EEEEeCCCHHHHHHHh-------ccCCCEEEEC--CCcccCHHHHHHHHHHhh-hcc
Confidence 34688899998887642 23 4444333323322221 1346766542 222223677888888842 125
Q ss_pred ceEEEEEcCCCC-CChHHHHHHHHH
Q 011596 312 YEFVAIFDADFQ-PNPDFLRRTVPH 335 (482)
Q Consensus 312 ~d~Vl~lDaD~~-~~pd~L~~lv~~ 335 (482)
.|+++++++|.. ++++.+++++..
T Consensus 96 ~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 96 AEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp CSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CCeEEEEeCCcccCCHHHHHHHHhh
Confidence 689999999996 589999999987
No 32
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=85.94 E-value=4.4 Score=36.69 Aligned_cols=90 Identities=8% Similarity=0.086 Sum_probs=54.3
Q ss_pred chHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCC
Q 011596 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (482)
Q Consensus 232 e~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~ 311 (482)
....+..+++.+.+. . +++ ++++++ +...+.+ . .. +.+++.. +...++.++.+ .+++ ..+
T Consensus 26 g~pli~~~l~~~~~~-~--~~i-~v~~~~---~~i~~~~----~---~~-~~~~~~~-~~~~~g~~~~~-~~~~---~~~ 85 (234)
T 2y6p_A 26 GKPLIRWVVEGLVKT-G--ERV-ILATDS---ERVKEVV----E---DL-CEVFLTP-SDLPSGSDRVL-YVVR---DLD 85 (234)
T ss_dssp TEEHHHHHHHHHHTT-T--SCE-EEEESC---HHHHHHH----T---TT-SEEEECC-TTCCSHHHHHH-HHHT---TCC
T ss_pred CEEHHHHHHHHHHHh-C--CEE-EEECCh---HHHHHHH----H---hc-eEEEECC-cccccchHHHH-HHHH---hCC
Confidence 347888899988876 2 233 334433 3332222 2 22 5555432 22233344444 4555 345
Q ss_pred ceEEEEEcCCC-CCChHHHHHHHHHhhcCCC
Q 011596 312 YEFVAIFDADF-QPNPDFLRRTVPHFKDNEE 341 (482)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p~ 341 (482)
.|+++++++|. ..++..+.+++..+.++++
T Consensus 86 ~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~ 116 (234)
T 2y6p_A 86 VDLIINYQGDEPFVYEEDIKLIFRELEKGER 116 (234)
T ss_dssp CSEEEECCTTCCCCCHHHHHHHHHHHHHTCS
T ss_pred CCEEEEecCCcCcCCHHHHHHHHHHHHhCCC
Confidence 78999999999 8899999999998865444
No 33
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=82.34 E-value=6.6 Score=40.41 Aligned_cols=112 Identities=12% Similarity=0.082 Sum_probs=66.9
Q ss_pred EeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhh
Q 011596 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (482)
Q Consensus 226 iIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~ 305 (482)
++|..|.+ .|.-.|+.+.+.... + |+|+-....+...+.+.+..++ .+.++.|....++.| -++|+..++.
T Consensus 34 l~pv~gkp-~i~~~l~~~~~~g~~--~--i~vv~~~~~~~i~~~~~~~~~~---~~~~i~~~~q~~~lG-Ta~Av~~a~~ 104 (501)
T 3st8_A 34 LHTLAGRS-MLSHVLHAIAKLAPQ--R--LIVVLGHDHQRIAPLVGELADT---LGRTIDVALQDRPLG-TGHAVLCGLS 104 (501)
T ss_dssp GCEETTEE-HHHHHHHHHHHHCCS--E--EEEEECTTHHHHHHHHHHHHHH---HTSCCEEEECSSCCC-HHHHHHHHHT
T ss_pred HeEECChh-HHHHHHHHHHhCCCC--E--EEEEeCCCHHHHHHHHHHHHHh---cCCcEEEEEcCCCCC-cHHHHHHHHH
Confidence 56777876 777788888776532 3 4444444445555555443332 344555554555555 7888888887
Q ss_pred hcccCCceEEEEEcCCC-CCChHHHHHHHHHhhcCC-CeEEEe
Q 011596 306 CSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKDNE-ELGLVQ 346 (482)
Q Consensus 306 ~~~~a~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p-~v~~V~ 346 (482)
.......+.++++.+|+ ....+.+..++.....+. .+.++.
T Consensus 105 ~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~ 147 (501)
T 3st8_A 105 ALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLT 147 (501)
T ss_dssp TSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEee
Confidence 53222234566666665 668899999988776533 333433
No 34
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=80.37 E-value=8.9 Score=35.48 Aligned_cols=92 Identities=13% Similarity=0.172 Sum_probs=54.0
Q ss_pred chHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCC
Q 011596 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (482)
Q Consensus 232 e~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~ 311 (482)
....+..+++.+.+... ++ |+|+-+. +...+.+ . ..++.+++.. ....++.+ .+..+++.....+
T Consensus 26 gkpli~~~l~~l~~~~~--~~--ivvv~~~--~~i~~~~----~---~~~~~~~~~~-~~~~~g~~-~~~~~~~~l~~~~ 90 (262)
T 1vic_A 26 GKPMIQHVFEKALQSGA--SR--VIIATDN--ENVADVA----K---SFGAEVCMTS-VNHNSGTE-RLAEVVEKLAIPD 90 (262)
T ss_dssp TEEHHHHHHHHHHHTTC--SE--EEEEESC--HHHHHHH----H---HTTCEEEECC-CSSCCHHH-HHHHHHHHTTCCT
T ss_pred CeEHHHHHHHHHHhCCC--ce--EEEECCc--HHHHHHH----H---hcCCEEEECC-ccccCChH-HHHHHHHHhccCC
Confidence 34788899999887654 34 3344332 3333332 2 3467765431 12222233 3444443211235
Q ss_pred ceEEEEEcCCC-CCChHHHHHHHHHhhc
Q 011596 312 YEFVAIFDADF-QPNPDFLRRTVPHFKD 338 (482)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~f~~ 338 (482)
.|+++++++|. .++++.+++++..+..
T Consensus 91 ~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 118 (262)
T 1vic_A 91 NEIIVNIQGDEPLIPPVIVRQVADNLAK 118 (262)
T ss_dssp TCEEEECCTTCTTCCHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcCccCHHHHHHHHHHHHh
Confidence 78999999999 5689999999988764
No 35
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=80.25 E-value=14 Score=33.56 Aligned_cols=92 Identities=11% Similarity=0.120 Sum_probs=54.5
Q ss_pred CchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccC
Q 011596 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (482)
Q Consensus 231 ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a 310 (482)
+....+..+++.+.+.... +++ ++++++ +...+.++ ..++.++... ....++.++. ..+++. .
T Consensus 25 ~g~pli~~~i~~~~~~~~~-~~i-vvv~~~---~~i~~~~~-------~~~~~~~~~~-~~~~~g~~~~-~~~~~~---~ 87 (245)
T 1h7e_A 25 VGKPMIQHVYERALQVAGV-AEV-WVATDD---PRVEQAVQ-------AFGGKAIMTR-NDHESGTDRL-VEVMHK---V 87 (245)
T ss_dssp TTEEHHHHHHHHHHTCTTC-CEE-EEEESC---HHHHHHHH-------HTTCEEEECC-SCCSSHHHHH-HHHHHH---S
T ss_pred CCchHHHHHHHHHHhCCCC-CeE-EEECCc---HHHHHHHH-------HcCCeEEeCC-CccCCcHHHH-HHHHHh---C
Confidence 3446888899998876532 233 334432 33333322 3467765431 1222223333 344442 3
Q ss_pred CceEEEEEcCCCC-CChHHHHHHHHHhhcC
Q 011596 311 DYEFVAIFDADFQ-PNPDFLRRTVPHFKDN 339 (482)
Q Consensus 311 ~~d~Vl~lDaD~~-~~pd~L~~lv~~f~~~ 339 (482)
+.|.++++++|.- ++++.+.+++..+..+
T Consensus 88 ~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~ 117 (245)
T 1h7e_A 88 EADIYINLQGDEPMIRPRDVETLLQGMRDD 117 (245)
T ss_dssp CCSEEEECCTTCTTCCHHHHHHHHHHHHHC
T ss_pred CCCEEEEEcCCcCcCCHHHHHHHHHHHHhC
Confidence 5789999999995 5899999999988654
No 36
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=79.83 E-value=1.7 Score=40.95 Aligned_cols=104 Identities=9% Similarity=0.129 Sum_probs=60.9
Q ss_pred eecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHH------------------HHHhhhCCCeEEEEe
Q 011596 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEE------------------VLKWQEAGANIVYRH 288 (482)
Q Consensus 227 IP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~------------------~~~~~~~~v~vv~~~ 288 (482)
+|.-+. ..|..+++.+.+... ++ |+|+-....+...+.+... .... ..++++.+..
T Consensus 28 l~i~gk-pli~~~l~~l~~~gi--~~--i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~i~~~~ 101 (281)
T 3juk_A 28 LPIVDK-PLIQYAVEEAMEAGC--EV--MAIVTGRNKRSLEDYFDTSYEIEHQIQGTNKENALKSIRNI-IEKCCFSYVR 101 (281)
T ss_dssp CBSSSS-BHHHHHHHHHHHHTC--CE--EEEEECTTHHHHHHHTSCCC--------CCHHHHHHHHHHH-HHHCEEEEEE
T ss_pred ceECCE-EHHHHHHHHHHhCCC--CE--EEEEecCCHHHHHHHHhcchhhhhhhhcccchhhhhhhhcc-ccCccEEEEe
Confidence 444555 788888888887653 23 3444433333333222100 0000 0245665554
Q ss_pred ccCCCCCccccHHHHhhhcccCCceEEEEEcCCCCCChH----HHHHHHHHhhcCC
Q 011596 289 RILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPD----FLRRTVPHFKDNE 340 (482)
Q Consensus 289 ~~~~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd----~L~~lv~~f~~~p 340 (482)
.....| -++++..++.. .+.+.++++.+|...+++ .+.+++..+.+..
T Consensus 102 ~~~~~G-t~~al~~a~~~---l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~ 153 (281)
T 3juk_A 102 QKQMKG-LGHAILTGEAL---IGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQ 153 (281)
T ss_dssp CSSCCC-HHHHHHHTHHH---HCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHC
T ss_pred cCCCCC-cHHHHHHHHHH---cCCCCEEEEeCCeeccCccchHHHHHHHHHHHHcC
Confidence 444444 66778777764 234778899999988888 8999999876533
No 37
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=79.12 E-value=6.9 Score=35.99 Aligned_cols=99 Identities=10% Similarity=0.051 Sum_probs=56.9
Q ss_pred chHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhccc--
Q 011596 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYV-- 309 (482)
Q Consensus 232 e~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~-- 309 (482)
....+..+++.+.+..... ++ ++|+++...+...+ ..+.+... ..+.+.. .+.+ ..+++..|++....
T Consensus 31 Gkpll~~~l~~~~~~~~~~-~i-vvv~~~~~~~~~~~----~~~~~~~~-~~~~~~~--~~~~-~~~sv~~al~~l~~~~ 100 (246)
T 3f1c_A 31 GKPIIVHTVEKFILNTRFD-KI-LISSPKEWMNHAED----NIKKYISD-DRIVVIE--GGED-RNETIMNGIRFVEKTY 100 (246)
T ss_dssp TEEHHHHHHHHHHTCTTCS-EE-EEEECGGGHHHHHH----HHHHHCCC-TTEEEEE--CCSS-HHHHHHHHHHHHHHHT
T ss_pred CeeHHHHHHHHHHcCCCCC-EE-EEEeCHHHHHHHHH----HHHHhCCC-CCEEEEC--CCCc-hHHHHHHHHHHHhhhh
Confidence 3478999999988764222 33 33444322222333 33333211 1222221 1222 45566677764311
Q ss_pred --CCceEEEEEcCCC-CCChHHHHHHHHHhhcCC
Q 011596 310 --KDYEFVAIFDADF-QPNPDFLRRTVPHFKDNE 340 (482)
Q Consensus 310 --a~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p 340 (482)
.+.|+|+++|+|. .++++.+.+++..+.+++
T Consensus 101 ~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~ 134 (246)
T 3f1c_A 101 GLTDDDIIVTHDAVRPFLTHRIIEENIDAALETG 134 (246)
T ss_dssp CCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTS
T ss_pred cCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcC
Confidence 2368999999998 679999999999987643
No 38
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=78.62 E-value=2.2 Score=40.65 Aligned_cols=108 Identities=11% Similarity=0.037 Sum_probs=63.2
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhcccccccccccc
Q 011596 310 KDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNG 389 (482)
Q Consensus 310 a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 389 (482)
.+.+|++++|+|+.+..+-|.+++..+ +|+-.+.-|.......... ..+... .... .....++..|
T Consensus 92 ~~~~Wf~~~DDDtyv~~~nL~~~L~~~--d~~~~~YiG~~~~~~~~~~-------~~~~~~-~~~~----~~~~~y~~GG 157 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVNPKALLQLLKTF--PQDRDVYVGKPSLNRPIHA-------SELQSK-QRTK----LVRFWFATGG 157 (280)
T ss_dssp HTCSEEEEEETTEEECHHHHHHHHTTS--CTTSCCEEECEEC-------------------------------CCEECGG
T ss_pred CCCcEEEEeCCCcEEcHHHHHHHHHhC--CCCCCEEEEEeccCccccc-------cccCcc-cccc----ccccCcccCC
Confidence 689999999999999999999998877 3443333333221111000 000000 0000 0001233468
Q ss_pred ceEeeeHHHHHHcCC------C-C---CCCchhHHHHHHHHH-HCCCcEEEec
Q 011596 390 TAGVWRIKALEDSGG------W-M---ERTTVEDMDIAVRAH-LRGWKFIFLN 431 (482)
Q Consensus 390 ~~~~~Rr~~l~~iGg------f-~---~~~~~ED~~l~~rl~-~~G~ki~~~~ 431 (482)
+++++.+++++++-. + . .....||..++.-+. ..|.+....+
T Consensus 158 aG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~ 210 (280)
T 2j0a_A 158 AGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSP 210 (280)
T ss_dssp GCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECT
T ss_pred CEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecc
Confidence 899999999988632 1 1 112358999999998 8898776644
No 39
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=76.21 E-value=16 Score=32.76 Aligned_cols=94 Identities=14% Similarity=0.127 Sum_probs=54.0
Q ss_pred chHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCC--CccccHHHHhhhccc
Q 011596 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDG--YKAGNLKSAMNCSYV 309 (482)
Q Consensus 232 e~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g--~Ka~aln~al~~~~~ 309 (482)
....+..+++.+.+...- ++ |+|+-+ ++...+.+ . ..++.++.....-..+ +...++..|++.. .
T Consensus 28 gkpll~~~l~~~~~~~~~-~~--ivvv~~--~~~i~~~~----~---~~~~~~~~~~~~~~~~~~g~~~sv~~~l~~~-~ 94 (228)
T 1ezi_A 28 GISLLGHTINAAISSKCF-DR--IIVSTD--GGLIAEEA----K---NFGVEVVLRPAELASDTASSISGVIHALETI-G 94 (228)
T ss_dssp TEEHHHHHHHHHHHHCCC-SE--EEEEES--CHHHHHHH----H---HTTCEEEECCC------CHHHHHHHHHHHHH-T
T ss_pred CcCHHHHHHHHHHhCCCC-CE--EEEECC--CHHHHHHH----H---HcCCEEEeCchHHcCCCCChHHHHHHHHHHh-C
Confidence 346888888888775421 23 334333 23333322 2 3466653221101112 2455677777642 2
Q ss_pred CCceEEEEEcCCC-CCChHHHHHHHHHhhc
Q 011596 310 KDYEFVAIFDADF-QPNPDFLRRTVPHFKD 338 (482)
Q Consensus 310 a~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~ 338 (482)
.+.|.++++++|. .++++.+.+++..+..
T Consensus 95 ~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~ 124 (228)
T 1ezi_A 95 SNSGTVTLLQPTSPLRTGAHIREAFSLFDE 124 (228)
T ss_dssp CCSEEEEECCTTCTTCCHHHHHHHHTTCCT
T ss_pred CCCCEEEEEcCCCCcCCHHHHHHHHHHHHh
Confidence 2469999999998 5689999999988764
No 40
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=75.96 E-value=11 Score=33.76 Aligned_cols=86 Identities=9% Similarity=0.043 Sum_probs=54.4
Q ss_pred CchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccC
Q 011596 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (482)
Q Consensus 231 ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a 310 (482)
+....++.+++.+... +|+|+-+. ++... ...+ ..++.++.. ..... |...++..|++. .
T Consensus 24 ~G~pli~~~~~~l~~~-------~vvvv~~~-~~~~~----~~~~---~~~~~~v~d-~~~~~-G~~~si~~gl~~---~ 83 (208)
T 3ngw_A 24 CGKKLIEWVLEKYSPF-------QTVFVCRD-EKQAE----KLSS---RYEAEFIWD-LHKGV-GSIAGIHAALRH---F 83 (208)
T ss_dssp TTEEHHHHHHHHHTTS-------EEEEECSS-HHHHH----HHHT---TSCSCEECC-TTCCC-SHHHHHHHHHHH---H
T ss_pred CCeeHHHHHHHHhcCC-------CEEEEECC-HHHHH----HHHH---hcCCeEEec-CCCCC-ChHHHHHHHHHH---c
Confidence 5557888899888764 34455432 22222 2111 246666521 11222 355678888884 3
Q ss_pred CceEEEEEcCCC-CCChHHHHHHHHHhhc
Q 011596 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKD 338 (482)
Q Consensus 311 ~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~ 338 (482)
.|++ ++++|. .++++.+++++..+..
T Consensus 84 -~~~v-v~~~D~P~i~~~~i~~l~~~~~~ 110 (208)
T 3ngw_A 84 -GSCV-VAAIDMPFVKPEVLEHLYKEGEK 110 (208)
T ss_dssp -SSEE-EEETTCTTCCHHHHHHHHHHHHH
T ss_pred -CCCE-EEECCccCCCHHHHHHHHHHhhc
Confidence 7899 999999 5699999999998873
No 41
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=75.68 E-value=11 Score=37.90 Aligned_cols=96 Identities=18% Similarity=0.212 Sum_probs=57.5
Q ss_pred hHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCc
Q 011596 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (482)
Q Consensus 233 ~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~ 312 (482)
...++.+++.+.+... +++ +|+-+...+...+.++ +.++.++. .+...| -.+++..|++. ..+.
T Consensus 36 ~pli~~~l~~l~~~~~--~~i--~vv~~~~~~~i~~~~~-------~~~~~~v~--~~~~~g-~~~~i~~~~~~--~~~~ 99 (459)
T 4fce_A 36 KPMVQHVIDAAMKLGA--QHV--HLVYGHGGELLKKTLA-------DPSLNWVL--QAEQLG-TGHAMQQAAPH--FADD 99 (459)
T ss_dssp EEHHHHHHHHHHHHTC--SCE--EEEESSCHHHHHHHC------------CEEE--CSSCCC-HHHHHHHHGGG--SCTT
T ss_pred eeHHHHHHHHHHhCCC--CcE--EEEeCCCHHHHHHHhc-------cCCcEEEe--CCCCCC-cHHHHHHHHHh--cCCC
Confidence 4688889998887652 233 3333323333333222 23455442 333333 56778888874 2346
Q ss_pred eEEEEEcCCC-CCChHHHHHHHHHhhcCCCeEEE
Q 011596 313 EFVAIFDADF-QPNPDFLRRTVPHFKDNEELGLV 345 (482)
Q Consensus 313 d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p~v~~V 345 (482)
|.++++++|. .+++..+++++..+.+ .+..++
T Consensus 100 ~~~lv~~~D~P~i~~~~i~~l~~~~~~-~~~~~~ 132 (459)
T 4fce_A 100 EDILMLYGDVPLISVDTLQRLLAAKPE-GGIGLL 132 (459)
T ss_dssp SEEEEEETTCTTCCHHHHHHHHHHCCT-TSEEEE
T ss_pred CcEEEEeCCcccCCHHHHHHHHHHHhh-CCEEEE
Confidence 8999999999 6799999999998864 343333
No 42
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=75.35 E-value=7.4 Score=34.12 Aligned_cols=93 Identities=13% Similarity=0.185 Sum_probs=54.6
Q ss_pred chHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCC
Q 011596 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (482)
Q Consensus 232 e~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~ 311 (482)
....+..+++.+.+... ++ |+|+-+..++...+.+.+. +. ....+... .....| ...++..|++. .
T Consensus 26 g~pli~~~l~~l~~~~~--~~--v~vv~~~~~~~i~~~~~~~---~~-~~~~~~~~-~~~~~g-~~~si~~al~~---~- 91 (196)
T 3rsb_A 26 GRCLIDYVVSPLLKSKV--NN--IFIATSPNTPKTKEYINSA---YK-DYKNIVVI-DTSGKG-YIEDLNECIGY---F- 91 (196)
T ss_dssp TEEHHHHHHHHHHSSSC--CC--EEEECCTTCHHHHHHHHHH---TT-TTTEEEE----------CCCCCTTTTT---C-
T ss_pred CEEHHHHHHHHHHHCCC--CE--EEEEeCCChHHHHHHHHhh---cc-CCCCEEEE-ECCCCC-cHHHHHHHHHh---C-
Confidence 34688999999887652 23 4444443455554444321 11 11122222 222333 56667777773 3
Q ss_pred ceEEEEEcCCC-CCChHHHHHHHHHhhc
Q 011596 312 YEFVAIFDADF-QPNPDFLRRTVPHFKD 338 (482)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~f~~ 338 (482)
.|.++++++|. .++++.+.+++..+.+
T Consensus 92 ~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 92 SEPFLVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp SSCEEEEETTEESCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 78999999999 5699999999999874
No 43
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=74.97 E-value=18 Score=33.01 Aligned_cols=93 Identities=15% Similarity=0.214 Sum_probs=53.5
Q ss_pred CchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhccc-
Q 011596 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYV- 309 (482)
Q Consensus 231 ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~- 309 (482)
+....+..+++.+.+...-. ++ |+|+++...+...+ ... . ++.++ . .+.+ ....+..|++....
T Consensus 33 ~Gkpll~~~l~~~~~~~~~~-~i-vVv~~~~~~~~~~~----~~~---~-~v~~v--~--gg~~-r~~sv~~gl~~~~~~ 97 (231)
T 3q80_A 33 DGQTLIERAVDGLLDSGVVD-TV-VVAVPADRTDEARQ----ILG---H-RAMIV--A--GGSN-RTDTVNLALTVLSGT 97 (231)
T ss_dssp TTEEHHHHHHHHHHHTSCCC-EE-EEEECGGGHHHHHH----HHG---G-GCEEE--E--CCSS-HHHHHHHHHGGGC--
T ss_pred CCeEHHHHHHHHHHhCCCCC-eE-EEECChHHHHHHHH----Hhc---C-CeEEE--c--CCCc-hHHHHHHHHHHhhhc
Confidence 34468899999988753222 33 33443322122222 211 2 34433 1 1111 34566777774211
Q ss_pred CCceEEEEEcCCC-CCChHHHHHHHHHhhc
Q 011596 310 KDYEFVAIFDADF-QPNPDFLRRTVPHFKD 338 (482)
Q Consensus 310 a~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~ 338 (482)
.+.|+|++.|+|. .++++.+++++..+.+
T Consensus 98 ~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 98 AEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp -CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred CCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 1258999999998 6699999999999875
No 44
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=71.96 E-value=24 Score=35.35 Aligned_cols=90 Identities=17% Similarity=0.175 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCc
Q 011596 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (482)
Q Consensus 233 ~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~ 312 (482)
...+..+++.+.+... +++ ++++++ ..+...+ ... +.++.++. .....| ..+++..+++. ..+.
T Consensus 33 kpli~~~l~~l~~~~~--~~i-ivv~~~-~~~~i~~----~~~---~~~~~~v~--~~~~~g-~~~~~~~~~~~--~~~~ 96 (456)
T 2v0h_A 33 KPMVKHVIDTAHQLGS--ENI-HLIYGH-GGDLMRT----HLA---NEQVNWVL--QTEQLG-TAHAVQQAAPF--FKDN 96 (456)
T ss_dssp EEHHHHHHHHHHHTTC--SCE-EEEECT-THHHHHH----HTT---TCCCEEEE--CSCCCC-HHHHHHHHGGG--CCTT
T ss_pred ccHHHHHHHHHHhCCC--CcE-EEEeCC-CHHHHHH----Hhh---cCCcEEEe--CCCCCC-cHHHHHHHHHh--cCCC
Confidence 3688889999887652 233 334443 2222222 211 22455442 222333 56677777763 2237
Q ss_pred eEEEEEcCCC-CCChHHHHHHHHHhhc
Q 011596 313 EFVAIFDADF-QPNPDFLRRTVPHFKD 338 (482)
Q Consensus 313 d~Vl~lDaD~-~~~pd~L~~lv~~f~~ 338 (482)
|+++++++|. .+++..+++++..+.+
T Consensus 97 ~~vlv~~~D~P~i~~~~i~~l~~~~~~ 123 (456)
T 2v0h_A 97 ENIVVLYGDAPLITKETLEKLIEAKPE 123 (456)
T ss_dssp SEEEEEETTCTTCCHHHHHHHHHHCCT
T ss_pred CeEEEEcCCcceeCHHHHHHHHHHHhc
Confidence 8999999999 5689999999988764
No 45
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=71.94 E-value=23 Score=33.66 Aligned_cols=95 Identities=9% Similarity=0.114 Sum_probs=55.5
Q ss_pred eecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhh-CCC-eEEEEeccCCCCCccccHHHHh
Q 011596 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQE-AGA-NIVYRHRILRDGYKAGNLKSAM 304 (482)
Q Consensus 227 IP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~-~~v-~vv~~~~~~~~g~Ka~aln~al 304 (482)
+|..+....+..+++.+.+. . .++ +++++....+...+.+ . + .++ ++.+...+...| -++++..+.
T Consensus 31 l~i~gg~pli~~~l~~l~~~-~--~~i-~vv~~~~~~~~i~~~~----~---~~~~~~~~~~i~~~~~~g-t~~al~~a~ 98 (308)
T 2qh5_A 31 LKLFDHKSLFELSFKRNASL-V--DET-LIVCNEKHYFLALEEI----K---NEIKNKSVGFLLESLSKN-TANAIALSA 98 (308)
T ss_dssp CTTBTTBCHHHHHHHHHHTT-C--SEE-EEEEEGGGHHHHHHHT----T---TTCSSCEEEEEEESSCCC-HHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHcc-C--CCE-EEEEChhHHHHHHHHH----H---HhhCCCccEEEeCCCCCC-hHHHHHHHH
Confidence 44444557888899988876 3 233 3344432222222222 2 2 244 443433333344 677777777
Q ss_pred hhcccCCceEEEEEcCCCCC-ChHHHHHHHHH
Q 011596 305 NCSYVKDYEFVAIFDADFQP-NPDFLRRTVPH 335 (482)
Q Consensus 305 ~~~~~a~~d~Vl~lDaD~~~-~pd~L~~lv~~ 335 (482)
.. ....++++++.+|... +++.+.+++..
T Consensus 99 ~~--l~~~~~~lv~~~D~~~~~~~~~~~~~~~ 128 (308)
T 2qh5_A 99 LM--SDKEDLLIVTPSDHLIKDLQAYENAIKK 128 (308)
T ss_dssp HT--SCTTSEEEEEESSCBCCCHHHHHHHHHH
T ss_pred HH--hCCCCeEEEEcCCccccCHHHHHHHHHH
Confidence 63 2335689999999987 78888888875
No 46
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=69.69 E-value=15 Score=33.03 Aligned_cols=98 Identities=10% Similarity=0.083 Sum_probs=54.3
Q ss_pred chHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCC--eEEEEeccCCCCCccccHHHHhhhccc
Q 011596 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGA--NIVYRHRILRDGYKAGNLKSAMNCSYV 309 (482)
Q Consensus 232 e~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v--~vv~~~~~~~~g~Ka~aln~al~~~~~ 309 (482)
....+..+++.+.+...-. ++ ++++++...+...+.++ .+. ..+ ..... ....| ...++..|++....
T Consensus 30 g~pli~~~l~~l~~~~~~~-~i-~vv~~~~~~~~~~~~~~----~~~-~~~~~~~~~~--~~~~~-~~~~i~~~l~~~~~ 99 (236)
T 2vsh_A 30 DRPILIHTIEKFVLEPSIE-KI-VVGVHGDWVSHAEDLVD----KYL-PLYKERIIIT--KGGAD-RNTSIKNIIEAIDA 99 (236)
T ss_dssp TEEHHHHHHHHHHTCTTCC-CE-EEEECGGGHHHHHHHHH----HHC-GGGGGGEEEE--ECCSS-HHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHcCCCCC-eE-EEEeCHHHHHHHHHHHH----hcc-ccccCceEEE--CCCCc-hHHHHHHHHHHHHh
Confidence 4478888999888753222 33 33343322133333332 221 001 11111 11222 45566677764211
Q ss_pred --C--CceEEEEEcCCC-CCChHHHHHHHHHhhcC
Q 011596 310 --K--DYEFVAIFDADF-QPNPDFLRRTVPHFKDN 339 (482)
Q Consensus 310 --a--~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~ 339 (482)
. +.|+++++++|. .++++.+++++..+..+
T Consensus 100 ~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 134 (236)
T 2vsh_A 100 YRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNH 134 (236)
T ss_dssp HSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHS
T ss_pred hccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhc
Confidence 2 458999999999 77999999999988754
No 47
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=69.26 E-value=14 Score=32.76 Aligned_cols=84 Identities=15% Similarity=0.163 Sum_probs=51.1
Q ss_pred chHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCC
Q 011596 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (482)
Q Consensus 232 e~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~ 311 (482)
....+..+++.+... . ++ |+|+-+...+ . +. ..++.++.. ......+...++..|++. .+
T Consensus 32 G~pli~~~l~~l~~~-~--~~--ivvv~~~~~~---~-~~-------~~~~~~v~~-~~~~~~G~~~si~~~l~~---~~ 91 (201)
T 1e5k_A 32 GKPLWQHVADALMTQ-L--SH--VVVNANRHQE---I-YQ-------ASGLKVIED-SLADYPGPLAGMLSVMQQ---EA 91 (201)
T ss_dssp TEEHHHHHHHHHHHH-C--SC--EEEECSSSHH---H-HH-------TTSCCEECC-CTTCCCSHHHHHHHHHHH---CC
T ss_pred ceeHHHHHHHHHHhh-C--CE--EEEEcCCcHH---H-Hh-------hcCCeEEec-CCCCCCCHHHHHHHHHHh---CC
Confidence 346788888877643 1 23 4444433221 1 11 345665422 112212366777778873 46
Q ss_pred ceEEEEEcCCC-CCChHHHHHHHHH
Q 011596 312 YEFVAIFDADF-QPNPDFLRRTVPH 335 (482)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~ 335 (482)
.|+++++++|. .++++.+++++..
T Consensus 92 ~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 92 GEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp SSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred CCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 79999999999 6789999999887
No 48
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=67.64 E-value=7.2 Score=34.49 Aligned_cols=85 Identities=15% Similarity=0.253 Sum_probs=50.5
Q ss_pred CchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccC-CCCCccccHHHHhhhccc
Q 011596 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRIL-RDGYKAGNLKSAMNCSYV 309 (482)
Q Consensus 231 ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~-~~g~Ka~aln~al~~~~~ 309 (482)
+....+..+++.+... ++ |+|+.+. .+.. ++.. ..++ ++. .+. ..| -..++..|++. .
T Consensus 26 ~g~pll~~~l~~l~~~-----~i-vvv~~~~-~~~~----~~~~----~~~~-~v~--~~~~~~G-~~~si~~al~~--~ 84 (197)
T 3d5n_A 26 DNTPIIMRTIRIYGDL-----EK-IIIVGKY-VNEM----LPLL----MDQI-VIY--NPFWNEG-ISTSLKLGLRF--F 84 (197)
T ss_dssp SSSBHHHHHHHHTTTS-----BC-CEEECTT-HHHH----GGGC----TTSC-EEE--CTTGGGC-HHHHHHHHHHH--T
T ss_pred CceEHHHHHHHHHHhC-----CE-EEEECCC-HHHH----HHHh----cCCE-EEE--CCCCCCC-HHHHHHHHHHh--h
Confidence 3446888888887654 23 3344332 2222 1111 1345 432 222 223 55667777774 2
Q ss_pred CCceEEEEEcCCC-CCChHHHHHHHHHh
Q 011596 310 KDYEFVAIFDADF-QPNPDFLRRTVPHF 336 (482)
Q Consensus 310 a~~d~Vl~lDaD~-~~~pd~L~~lv~~f 336 (482)
.+.|+++++++|. .++++.+++++..+
T Consensus 85 ~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 85 KDYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp TTSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred ccCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 2348999999999 67999999999887
No 49
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=66.24 E-value=7.5 Score=36.82 Aligned_cols=98 Identities=12% Similarity=0.100 Sum_probs=55.8
Q ss_pred hHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHH---HHHhhh-------------CCCeEEEEeccCCCCCc
Q 011596 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEE---VLKWQE-------------AGANIVYRHRILRDGYK 296 (482)
Q Consensus 233 ~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~---~~~~~~-------------~~v~vv~~~~~~~~g~K 296 (482)
...+..+++.+.+... ++ |+|+-+...+...+.+... ..+... .++++.+...+...| -
T Consensus 45 kpli~~~l~~l~~~g~--~~--i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~i~~~~~~~~~G-t 119 (297)
T 2ux8_A 45 RPLIQYAVDEAVEAGI--EQ--MIFVTGRGKSALEDHFDIAYELEATMAARGKSLDVLDGTRLKPGNIAYVRQQEPMG-L 119 (297)
T ss_dssp EEHHHHHHHHHHHTTC--CE--EEEEECTTCHHHHHHTSCCHHHHHHHHTTTCCGGGGTTSCCSTTSEEEEECCSCCC-H
T ss_pred eEHHHHHHHHHHhCCC--CE--EEEEeCCCHHHHHHHHhhhhhhhhhhhhccchhhhhhhcccCCCceEEEeCCCCCC-h
Confidence 3688888998887643 23 3344333344443332210 000000 244555543333334 5
Q ss_pred cccHHHHhhhcccCCceEEEEEcCCCCCC--hHHHHHHHHHhhc
Q 011596 297 AGNLKSAMNCSYVKDYEFVAIFDADFQPN--PDFLRRTVPHFKD 338 (482)
Q Consensus 297 a~aln~al~~~~~a~~d~Vl~lDaD~~~~--pd~L~~lv~~f~~ 338 (482)
++++..++.. .+.+.++++.+|...+ +..+.+++..+.+
T Consensus 120 ~~al~~a~~~---~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~ 160 (297)
T 2ux8_A 120 GHAVWCARDI---VGDEPFAVLLPDDFMFGQPGCLKQMVDAYNK 160 (297)
T ss_dssp HHHHHTTHHH---HCSSCEEEECTTEEEESSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHH---cCCCcEEEEeCCeecCCChHHHHHHHHHHHh
Confidence 5666666553 2357899999999887 6889999988764
No 50
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=65.28 E-value=30 Score=30.84 Aligned_cols=97 Identities=11% Similarity=0.090 Sum_probs=55.5
Q ss_pred CchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhccc-
Q 011596 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYV- 309 (482)
Q Consensus 231 ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~- 309 (482)
+....+..+++.+.+..... + |+|+-+...+...+ +. ++... .+.+. ....| ...++..|++....
T Consensus 32 ~gkpli~~~l~~l~~~~~~~-~--ivvv~~~~~~~~~~-~~----~~~~~--~i~~~--~~~~~-~~~si~~~l~~~~~~ 98 (231)
T 1vgw_A 32 GSKTVLEHVLGIFERHEAVD-L--TVVVVSPEDTFADK-VQ----TAFPQ--VRVWK--NGGQT-RAETVRNGVAKLLET 98 (231)
T ss_dssp TTEEHHHHHHHHHHTCTTCC-E--EEEECCTTCSTHHH-HH----HHCTT--SEEEC--CCCSS-HHHHHHHHHHHHHHH
T ss_pred CCeEHHHHHHHHHHcCCCCC-e--EEEEECccHHHHHH-HH----hcCCC--ceEEE--cCCCc-HHHHHHHHHHHHhhh
Confidence 34568889999888654222 3 34443322233333 22 12111 22222 22233 56667777764211
Q ss_pred ---CCceEEEEEcCCC-CCChHHHHHHHHHhhcCC
Q 011596 310 ---KDYEFVAIFDADF-QPNPDFLRRTVPHFKDNE 340 (482)
Q Consensus 310 ---a~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p 340 (482)
.+.|.++++++|. .++++.+.+++..+..++
T Consensus 99 ~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~ 133 (231)
T 1vgw_A 99 GLAAETDNILVHDAARCCLPSEALARLIEQAGNAA 133 (231)
T ss_dssp SSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCT
T ss_pred ccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcC
Confidence 1468999999998 568999999999886543
No 51
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=63.81 E-value=39 Score=31.60 Aligned_cols=101 Identities=4% Similarity=-0.095 Sum_probs=56.7
Q ss_pred eEEEEeecCCc-hHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCC--CC---
Q 011596 222 MVLVQIPMCNE-KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRD--GY--- 295 (482)
Q Consensus 222 ~VsViIP~yne-~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~--g~--- 295 (482)
.+.|++.+-+. ...+..++.|++..+ +...+.+.|++++-+++..+.+++..+ ..+..+....-.... +.
T Consensus 5 ~i~I~~~~d~~Y~~~~~v~i~Sl~~~~-~~~~~~~~il~~~is~~~~~~L~~~~~---~~~~~i~~~~~~~~~~~~~~~~ 80 (276)
T 3tzt_A 5 ADALLLTLDENYIPQMKVLMTSIYINN-PGRIFDVYLIHSRISEDKLKDLGEDLK---KFSYTLYPIRATDDLFSFAKVT 80 (276)
T ss_dssp CEEEEEECCGGGHHHHHHHHHHHHHHS-TTCCEEEEEEESCCCHHHHHHHHHHHH---TTTCEEEEEECC----------
T ss_pred eEEEEEEeCHhHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCCHHHHHHHHHHHH---HcCCEEEEEEeCHHHHhcCccc
Confidence 46677555433 388889999998754 223577878877777766666666655 345555544322210 10
Q ss_pred ccccHHHHhhh----cccCCceEEEEEcCCCCCCh
Q 011596 296 KAGNLKSAMNC----SYVKDYEFVAIFDADFQPNP 326 (482)
Q Consensus 296 Ka~aln~al~~----~~~a~~d~Vl~lDaD~~~~p 326 (482)
+.-....-.+. ....+.|-|+.+|+|+++-.
T Consensus 81 ~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~ 115 (276)
T 3tzt_A 81 DRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVIN 115 (276)
T ss_dssp ---CHHHHHHHTHHHHSCTTCCEEEEECSSEEECS
T ss_pred cccCHHHHHHHHHHHHcccccCeEEEEeCCeeecC
Confidence 00010001111 11236899999999998754
No 52
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=63.23 E-value=13 Score=34.43 Aligned_cols=95 Identities=16% Similarity=0.143 Sum_probs=55.0
Q ss_pred chHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCC
Q 011596 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (482)
Q Consensus 232 e~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~ 311 (482)
....+..+++++.+... +++ +++++....+...+.+ ......++.+.+.......| -++++..+++. .+
T Consensus 54 g~pli~~~l~~l~~~g~--~~i-ivv~~~~~~~~~~~~~----~~~~~~~~~i~~~~~~~~~G-~~~al~~a~~~---~~ 122 (269)
T 4ecm_A 54 RYPMIYHAVYKLKQCDI--TDI-MIITGKEHMGDVVSFL----GSGQEFGVSFTYRVQDKAGG-IAQALGLCEDF---VG 122 (269)
T ss_dssp TEEHHHHHHHHHHHTTC--CEE-EEEECTTTHHHHHHHH----TTSGGGTCEEEEEECSSCCC-HHHHHHTTHHH---HT
T ss_pred CEEHHHHHHHHHHHCCC--CEE-EEECChhhHHHHHHHH----hhccccCceEEEeeCCccCc-HHHHHHHHHHh---cC
Confidence 34688889999888652 233 3344432223332222 11112356666654333333 56666666653 23
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHhhc
Q 011596 312 YEFVAIFDADFQPNPDFLRRTVPHFKD 338 (482)
Q Consensus 312 ~d~Vl~lDaD~~~~pd~L~~lv~~f~~ 338 (482)
.+.++++.+|.... ..+.+++..+.+
T Consensus 123 ~~~~lv~~~D~~~~-~~l~~l~~~~~~ 148 (269)
T 4ecm_A 123 NDRMVVILGDNIFS-DDIRPYVEEFTN 148 (269)
T ss_dssp TSEEEEEETTEEES-SCSHHHHHHHHT
T ss_pred CCcEEEEeCCccCc-cCHHHHHHHHHh
Confidence 68899999999766 567788887764
No 53
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=61.51 E-value=16 Score=35.08 Aligned_cols=58 Identities=14% Similarity=-0.064 Sum_probs=37.0
Q ss_pred CCeEEEEeccCCCCCccccHHHHhhhcccCCceEEEEEcCCCCCC-hHHHHHHHHHhhcCC
Q 011596 281 GANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPN-PDFLRRTVPHFKDNE 340 (482)
Q Consensus 281 ~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~-pd~L~~lv~~f~~~p 340 (482)
++++.+...+...| -++++..++... ..+.|+++++.+|...+ +..+.+++..+.++.
T Consensus 104 g~~i~~~~~~~~~G-t~~al~~a~~~l-~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~ 162 (323)
T 2pa4_A 104 LIKAVPVTQDKPLG-LGHAVGLAESVL-DDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFG 162 (323)
T ss_dssp HCEEEEEECSSCCC-HHHHHHTTGGGS-CSSCCEEEEECTTEEEESSCHHHHHHHHHHTTC
T ss_pred CcceEEEeCCccCC-cHHHHHHHHHHh-cCCCCeEEEEeCCcccCchHHHHHHHHHHHhcC
Confidence 35554443333333 666666666532 12345689999999886 688999998887533
No 54
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=61.49 E-value=35 Score=32.27 Aligned_cols=100 Identities=9% Similarity=0.014 Sum_probs=55.0
Q ss_pred EeecC-CchHHHHHHHHHHHhCCCCCCceEEEEEcCCC-CHHHHHHHHHHHHHhhhCCCeEEEEecc-------------
Q 011596 226 QIPMC-NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSD-DPTAQTLIKEEVLKWQEAGANIVYRHRI------------- 290 (482)
Q Consensus 226 iIP~y-ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdss-dd~t~~~~~~~~~~~~~~~v~vv~~~~~------------- 290 (482)
++|.- +....+..+++.+.+.... + |+|+-+.. .+...+.+.. .+ ..+.++.+....
T Consensus 25 l~~ig~~g~pli~~~l~~~~~~~~~--~--i~vv~~~~~~~~~~~~~~~---~~-~~~~~i~~~~~~~~~~~~~~~~~~~ 96 (303)
T 3pnn_A 25 LDGIGPGGDTIMDYSVYDAIRAGFG--R--LVFVIRHSFEKEFREKILT---KY-EGRIPVELVFQELDRLPEGFSCPEG 96 (303)
T ss_dssp CCCCSTTSCCHHHHHHHHHHHHTCC--E--EEEEECGGGHHHHHHHTHH---HH-TTTSCEEEEECCTTCCCTTCCCCTT
T ss_pred EeEcCCCCeeHHHHHHHHHHHCCCC--e--EEEEcCchHHHHHHHHHHH---Hh-ccCCcEEEEeccccccccccccccc
Confidence 45553 3447888888888775432 3 33443333 2444333321 11 223444444332
Q ss_pred --CCCCCccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhc
Q 011596 291 --LRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKD 338 (482)
Q Consensus 291 --~~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~ 338 (482)
...| -++++..+... -+ +-++++.+|+..+++.+++++....+
T Consensus 97 ~~~~~G-t~~al~~a~~~---i~-~~~lV~~gD~l~~~~~~~~l~~~~~~ 141 (303)
T 3pnn_A 97 REKPWG-TNHAVLMGRDA---IR-EPFAVINADDFYGRNGFEVLARKLMT 141 (303)
T ss_dssp CCSCCC-HHHHHHTTTTT---CC-SCEEEEESSCBCCHHHHHHHHHHHHT
T ss_pred ccccCC-cHHHHHHHHHh---cC-CCEEEEECCeecCHHHHHHHHHHHHH
Confidence 1222 45555555542 23 44566789999999999999998763
No 55
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=59.58 E-value=35 Score=32.25 Aligned_cols=99 Identities=12% Similarity=0.134 Sum_probs=54.5
Q ss_pred EeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcC-CCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHh
Q 011596 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDD-SDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (482)
Q Consensus 226 iIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDd-ssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al 304 (482)
++|.++. ..+..+++.+..... ++ |+|+-. ...+...+.+ ....+.++++.+...+...| -+.++..|.
T Consensus 28 llpi~gk-pli~~~l~~l~~~gi--~~--Iivv~~~~~~~~i~~~l----~~g~~~g~~i~~~~~~~~~G-~~~al~~a~ 97 (295)
T 1lvw_A 28 LLPIYDK-PMIYYPLSVLMLAGI--RD--ILIISTPRDLPLYRDLL----GDGSQFGVRFSYRVQEEPRG-IADAFIVGK 97 (295)
T ss_dssp GSEETTE-ETTHHHHHHHHHTTC--CE--EEEEECTTTHHHHHHHH----TTSGGGTSEEEEEECSSCCC-GGGHHHHTH
T ss_pred ecEECCe-eHHHHHHHHHHHCCC--Ce--EEEEeccchHHHHHHHh----hhccccCceEEEeeCCCCCC-hHHHHHHHH
Confidence 3556665 577777877776542 23 444432 2233333222 21112466665554444344 677777777
Q ss_pred hhcccCCceEEEEEcCCCCCChHHHHHHHHHhh
Q 011596 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (482)
Q Consensus 305 ~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~ 337 (482)
+.. .+.+++++. +|..+....+.+++..+.
T Consensus 98 ~~i--~~~~~~lv~-gD~~~~~~~l~~~l~~~~ 127 (295)
T 1lvw_A 98 DFI--GDSKVALVL-GDNVFYGHRFSEILRRAA 127 (295)
T ss_dssp HHH--TTSCEEEEE-TTCCEECTTHHHHHHHHH
T ss_pred HHh--CCCcEEEEE-CCccccCcCHHHHHHHHH
Confidence 642 345676666 898763356778887774
No 56
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=59.13 E-value=16 Score=34.49 Aligned_cols=102 Identities=15% Similarity=0.138 Sum_probs=57.0
Q ss_pred ecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHH---HHHHhh---------------hCCCeEEEEec
Q 011596 228 PMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKE---EVLKWQ---------------EAGANIVYRHR 289 (482)
Q Consensus 228 P~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~---~~~~~~---------------~~~v~vv~~~~ 289 (482)
|..+ ...+..+++.+.+... +++ ++|+.. ..+...+.+.. +..+.. ..++++.+...
T Consensus 35 ~i~g-kpli~~~l~~l~~~gi--~~i-~vv~~~-~~~~i~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~i~~~~~ 109 (302)
T 2e3d_A 35 PLVD-KPLIQYVVNECIAAGI--TEI-VLVTHS-SKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHVTIMQVRQ 109 (302)
T ss_dssp EETT-EEHHHHHHHHHHHTTC--CEE-EEEECG-GGHHHHHHHSCCHHHHHHHC----CHHHHHHHHTSCTTCEEEEEEC
T ss_pred EECC-eEHHHHHHHHHHHCCC--CEE-EEEeCC-CHHHHHHHHhcchhhhhhhhhccchhhhhhhhhccccCcceEEeeC
Confidence 3344 4788889998887642 233 333333 33333332221 000000 12456655443
Q ss_pred cCCCCCccccHHHHhhhcccCCceEEEEEcCCCCCC----hH---HHHHHHHHhhc
Q 011596 290 ILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPN----PD---FLRRTVPHFKD 338 (482)
Q Consensus 290 ~~~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~----pd---~L~~lv~~f~~ 338 (482)
....| -++++..+.... +.+.++++.+|...+ +. .+.+++..+.+
T Consensus 110 ~~~~G-t~~al~~a~~~~---~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~ 161 (302)
T 2e3d_A 110 GLAKG-LGHAVLCAHPVV---GDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDE 161 (302)
T ss_dssp SSCCC-HHHHHHHTHHHH---CSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHH
T ss_pred CccCC-HHHHHHHHHHHc---CCCcEEEEcCCccccCccccchHHHHHHHHHHHHh
Confidence 33444 667777776632 346789999999876 45 78999988764
No 57
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=59.06 E-value=29 Score=30.66 Aligned_cols=89 Identities=16% Similarity=0.178 Sum_probs=51.3
Q ss_pred chHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCC
Q 011596 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (482)
Q Consensus 232 e~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~ 311 (482)
....+..+++.+.+..... + |+|+-+..... .+++.. . +..+.+... ..+ ...++..|++.. .+
T Consensus 29 g~pli~~~l~~l~~~~~~~-~--i~vv~~~~~~~---~~~~~~----~-~~~v~~~~~--~~~-~~~~i~~al~~~--~~ 92 (223)
T 2xwl_A 29 GTPLLEHALSGLRASGVID-R--IVIAVPPALTD---ESKLVF----G-GEDSVIVSG--GVD-RTESVALALEAA--GD 92 (223)
T ss_dssp TEEHHHHHHHHHHHHSCCS-E--EEEEECGGGHH---HHHHHT----C-BTTEEEEEC--CSS-HHHHHHHHHTTC--TT
T ss_pred CeEHHHHHHHHHhcCCCCC-e--EEEEEcccHHH---HHHHHh----c-cCCeEEEcC--CCC-HHHHHHHHHHhc--CC
Confidence 3468888888887654222 3 33443322211 122111 0 122333221 222 456677787742 26
Q ss_pred ceEEEEEcCCC-CCChHHHHHHHHHh
Q 011596 312 YEFVAIFDADF-QPNPDFLRRTVPHF 336 (482)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~f 336 (482)
.|+++++++|. .++++.+.+++..+
T Consensus 93 ~~~vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 93 AEFVLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred CCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 78999999999 56899999999988
No 58
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=58.38 E-value=29 Score=32.74 Aligned_cols=99 Identities=12% Similarity=0.104 Sum_probs=53.6
Q ss_pred EeecCCchHHHHHHHHHHHhCCCCCCceEEEEEc-CCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHh
Q 011596 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLD-DSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (482)
Q Consensus 226 iIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvD-dssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al 304 (482)
++|.++. ..+..+++.+..... ++ |+|+- ....+...+.+ ....+.++++.+...+...| -++++..|.
T Consensus 27 llpi~gk-pli~~~l~~l~~~gi--~~--I~vv~~~~~~~~i~~~l----~~g~~~g~~i~~~~~~~~~G-~~~al~~a~ 96 (293)
T 1fxo_A 27 LLPVYDK-PMIYYPLSTLMLAGI--RE--ILIISTPQDTPRFQQLL----GDGSNWGLDLQYAVQPSPDG-LAQAFLIGE 96 (293)
T ss_dssp GSEETTE-ETTHHHHHHHHHTTC--CE--EEEEECTTTHHHHHHHH----TTSGGGTCEEEEEECSSCCC-GGGHHHHTH
T ss_pred eCeECCE-eHHHHHHHHHHHCCC--CE--EEEEeccccHHHHHHHH----hcccccCceEEEeeCCCCCC-HHHHHHHHH
Confidence 3455665 577777887776542 23 44433 32333333322 21112356666554444444 677777777
Q ss_pred hhcccCCceEEEEEcCCCCCChHHHHHHHHHhh
Q 011596 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (482)
Q Consensus 305 ~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~ 337 (482)
+.. .+.+++++. +|..+.+..+.+++..+.
T Consensus 97 ~~i--~~~~~~lv~-gD~~~~~~~l~~~l~~~~ 126 (293)
T 1fxo_A 97 SFI--GNDLSALVL-GDNLYYGHDFHELLGSAS 126 (293)
T ss_dssp HHH--TTSEEEEEE-TTEEEECTTHHHHHHHHH
T ss_pred HHh--CCCCEEEEE-CChhccCccHHHHHHHHH
Confidence 642 234555555 998664356788888774
No 59
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=54.31 E-value=31 Score=32.87 Aligned_cols=89 Identities=16% Similarity=0.190 Sum_probs=48.2
Q ss_pred hHHHHHHHHHH-HhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCC--CC----Ccc-ccHHH--
Q 011596 233 KEVYQQSIAAV-CNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILR--DG----YKA-GNLKS-- 302 (482)
Q Consensus 233 ~~~l~~tL~Sl-l~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~--~g----~Ka-~aln~-- 302 (482)
...+..++.|+ +..+ +..+.++|++|+-+++..+.+++.... .+..+....-... .. .+. ...++
T Consensus 12 ~~~~~vli~Sl~l~~~--~~~~~f~il~~~ls~~~~~~L~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~s~~~y~R 86 (311)
T 1g9r_A 12 AAYLCVAAKSVEAAHP--DTEIRFHVLDAGISEANRAAVAANLRG---GGGNIRFIDVNPEDFAGFPLNIRHISITTYAR 86 (311)
T ss_dssp HHHHHHHHHHHHHTCT--TSCCEEEEEESSCCHHHHHHHHHHSGG---GTTTEEEEECCGGGGTTSCCCCTTCCGGGGGG
T ss_pred HHHHHHHHHHHHHHcC--CCCceEEEEECCCCHHHHHHHHHHHHH---cCCEEEEEEcCHHHHhcCccccccCCHHHHHH
Confidence 37788889999 6543 234667677777666666666655442 2444443321110 00 010 01111
Q ss_pred -HhhhcccCCceEEEEEcCCCCCChH
Q 011596 303 -AMNCSYVKDYEFVAIFDADFQPNPD 327 (482)
Q Consensus 303 -al~~~~~a~~d~Vl~lDaD~~~~pd 327 (482)
-+-. ...+.|-|+++|+|+++-.|
T Consensus 87 l~l~~-ll~~~~kvlyLD~D~iv~~d 111 (311)
T 1g9r_A 87 LKLGE-YIADCDKVLYLDIDVLVRDS 111 (311)
T ss_dssp GGHHH-HCCSCSCEEEECSSEEECSC
T ss_pred HHHHH-HhhhcCEEEEEcCCeEeccC
Confidence 0110 12477999999999988544
No 60
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=53.32 E-value=21 Score=35.99 Aligned_cols=95 Identities=6% Similarity=0.027 Sum_probs=55.4
Q ss_pred ecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhc
Q 011596 228 PMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCS 307 (482)
Q Consensus 228 P~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~ 307 (482)
|..+. ..+..+++.+.+... ++ |+|+-+...+...+.+ ..++.++. .....| .++++..+++..
T Consensus 35 ~i~gk-pli~~~l~~l~~~g~--~~--iivv~~~~~~~i~~~~--------~~~i~~v~--~~~~~G-~~~sl~~a~~~~ 98 (468)
T 1hm9_A 35 KVAGI-SMLEHVFRSVGAIQP--EK--TVTVVGHKAELVEEVL--------AGQTEFVT--QSEQLG-TGHAVMMTEPIL 98 (468)
T ss_dssp EETTE-EHHHHHHHHHHTTCC--SE--EEEEECTTHHHHHHSS--------SSSSEEEE--CSSCCC-HHHHHHTTHHHH
T ss_pred EECCc-cHHHHHHHHHHhcCC--CC--EEEEECCCHHHHHHHh--------CCCcEEEe--CCccCC-hHHHHHHHHHHh
Confidence 44443 788899999887642 23 3333332222222111 11455543 222333 566666666642
Q ss_pred ccCCceEEEEEcCCCC-CChHHHHHHHHHhhcC
Q 011596 308 YVKDYEFVAIFDADFQ-PNPDFLRRTVPHFKDN 339 (482)
Q Consensus 308 ~~a~~d~Vl~lDaD~~-~~pd~L~~lv~~f~~~ 339 (482)
....|.++++++|.. +.+..+++++..+.++
T Consensus 99 -~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~ 130 (468)
T 1hm9_A 99 -EGLSGHTLVIAGDTPLITGESLKNLIDFHINH 130 (468)
T ss_dssp -TTCCSEEEEEETTCTTCCHHHHHHHHHHHHHT
T ss_pred -ccCCCeEEEEeCCccccCHHHHHHHHHHHHhc
Confidence 123689999999995 6889999999887653
No 61
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=52.94 E-value=32 Score=30.85 Aligned_cols=94 Identities=14% Similarity=0.180 Sum_probs=53.8
Q ss_pred chHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCC
Q 011596 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (482)
Q Consensus 232 e~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~ 311 (482)
....+..+++.+.+..... ++ ++|++... +...+ + ..+....+.+ .. +..| ...++..|++. ..+
T Consensus 34 g~pll~~~i~~l~~~~~~~-~i-vvv~~~~~-~~~~~-~----~~~~~~~v~~--~~--~~~g-~~~~i~~al~~--~~~ 98 (236)
T 1i52_A 34 NQTILEHSVHALLAHPRVK-RV-VIAISPGD-SRFAQ-L----PLANHPQITV--VD--GGDE-RADSVLAGLKA--AGD 98 (236)
T ss_dssp TEEHHHHHHHHHHTSTTEE-EE-EEEECTTC-CSGGG-S----GGGGCTTEEE--EE--CCSS-HHHHHHHHHHT--STT
T ss_pred CEEHHHHHHHHHHhCCCCC-eE-EEEeCccH-HHHHH-H----HhcCCCCEEE--EC--CCCC-HHHHHHHHHHh--cCC
Confidence 4468888898887654211 32 33444322 22222 1 1111112332 21 1233 55667777773 224
Q ss_pred ceEEEEEcCCC-CCChHHHHHHHHHhhcCC
Q 011596 312 YEFVAIFDADF-QPNPDFLRRTVPHFKDNE 340 (482)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p 340 (482)
.|+++++++|. .++++.+.+++..+..++
T Consensus 99 ~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~ 128 (236)
T 1i52_A 99 AQWVLVHDAARPCLHQDDLARLLALSETSR 128 (236)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHGGGGTCS
T ss_pred CCEEEEEcCccccCCHHHHHHHHHHHHhcC
Confidence 78999999998 568999999999886543
No 62
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=52.71 E-value=29 Score=30.90 Aligned_cols=93 Identities=12% Similarity=0.037 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCc
Q 011596 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (482)
Q Consensus 233 ~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~ 312 (482)
...+..+++.+.+...- ++ |+|+-+...+... +.... ..+..+.+.. ...| ..+++..|++.. ..+.
T Consensus 32 ~pli~~~l~~l~~~~~~-~~--ivvv~~~~~~~~~---~~~~~---~~~~~v~~~~--~~~~-~~~sv~~al~~~-~~~~ 98 (228)
T 2yc3_A 32 QPIALYSFFTFSRMPEV-KE--IVVVCDPFFRDIF---EEYEE---SIDVDLSFAI--PGKE-RQDSVYSGLQEI-DVNS 98 (228)
T ss_dssp EEHHHHHHHHHHHCTTE-EE--EEEECCGGGHHHH---HTTTT---TSSSEEEEEC--CCSS-HHHHHHHHHTTS-CTTC
T ss_pred EEHHHHHHHHHHcCCCC-Ce--EEEEEChHHHHHH---HHHHH---hCCCcEEEEC--CCCC-HHHHHHHHHHhh-ccCC
Confidence 46888888888775221 12 4444433322221 11111 1233444332 1223 556677777642 1236
Q ss_pred eEEEEEcCCC-CCChHHHHHHHHHhhc
Q 011596 313 EFVAIFDADF-QPNPDFLRRTVPHFKD 338 (482)
Q Consensus 313 d~Vl~lDaD~-~~~pd~L~~lv~~f~~ 338 (482)
++++++|+|. .++++.+++++..+..
T Consensus 99 ~~vl~~d~d~P~~~~~~i~~l~~~~~~ 125 (228)
T 2yc3_A 99 ELVCIHDSARPLVNTEDVEKVLKDGSA 125 (228)
T ss_dssp SEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred CEEEEecCCCccCCHHHHHHHHHHHHh
Confidence 8999999997 6789999999998864
No 63
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=47.51 E-value=1.2e+02 Score=27.69 Aligned_cols=47 Identities=13% Similarity=0.278 Sum_probs=35.7
Q ss_pred CCCCccccHHHHhhhcccCCceEEEEEcCCC-CCChHHHHHHHHHhhc
Q 011596 292 RDGYKAGNLKSAMNCSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKD 338 (482)
Q Consensus 292 ~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~ 338 (482)
..++-+..|+.|++......++-++++-+|+ .++++.|.+++..+..
T Consensus 83 ~~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l~~ 130 (242)
T 3cgx_A 83 QGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDLQH 130 (242)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHhcc
Confidence 4445777788888753234567899999999 6799999999988864
No 64
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=46.53 E-value=43 Score=32.95 Aligned_cols=87 Identities=17% Similarity=0.182 Sum_probs=52.5
Q ss_pred chHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCC
Q 011596 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (482)
Q Consensus 232 e~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~ 311 (482)
....+..+++.+.+..... ++ +++++ ..+.. ++. ..++.++ ....| ...++..|++. .+
T Consensus 30 GkPLi~~~l~~l~~~~~~~-~I-vVvt~--~~~~i----~~~-----~~~v~~v----~~g~g-~~~sv~~aL~~---l~ 88 (371)
T 1w55_A 30 NDPLWLYATKNLSSFYPFK-KI-VVTSS--NITYM----KKF-----TKNYEFI----EGGDT-RAESLKKALEL---ID 88 (371)
T ss_dssp TEEHHHHHHHHHHTTSCCS-CE-EEEES--CHHHH----HTT-----CSSSEEE----ECCSS-HHHHHHHHHTT---CC
T ss_pred CeEHHHHHHHHHHccCCCC-eE-EEEcC--CHHHH----HHH-----hCCCEEE----eCCCC-hHHHHHHHHHh---cC
Confidence 4468888999887632222 33 33443 22222 211 1124443 11222 45677778873 34
Q ss_pred ceEEEEEcCCC-CCChHHHHHHHHHhhcC
Q 011596 312 YEFVAIFDADF-QPNPDFLRRTVPHFKDN 339 (482)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~ 339 (482)
.|+++++|+|. .++++.+++++..+.++
T Consensus 89 ~d~vlv~~~D~Pli~~~~i~~li~~~~~~ 117 (371)
T 1w55_A 89 SEFVMVSDVARVLVSKNLFDRLIENLDKA 117 (371)
T ss_dssp SSEEEEEETTCTTCCHHHHHHHHTTGGGC
T ss_pred CCeEEEEeCCcccCCHHHHHHHHHHHHhc
Confidence 79999999998 56999999999888753
No 65
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=45.93 E-value=39 Score=31.94 Aligned_cols=98 Identities=13% Similarity=0.115 Sum_probs=52.5
Q ss_pred eecCCchHHHHHHHHHHHhCCCCCCceEEEEEcC-CCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhh
Q 011596 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDD-SDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (482)
Q Consensus 227 IP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDd-ssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~ 305 (482)
+|.++. ..+..+++.+..... ++ |+|+-. ...+...+.+ ....+.++++.+...+...| -+.++..|..
T Consensus 29 lpi~gk-pli~~~l~~l~~~gi--~~--I~vv~~~~~~~~i~~~l----~~g~~~g~~i~~~~~~~~~G-~~~al~~a~~ 98 (296)
T 1mc3_A 29 LPIYDK-PMIYYPLSVLMLAGI--RE--ILIITTPEDKGYFQRLL----GDGSEFGIQLEYAEQPSPDG-LAQAFIIGET 98 (296)
T ss_dssp SEETTE-ETTHHHHHHHHHTTC--CE--EEEEECTTTHHHHHHHH----TTSGGGTCEEEEEECSSCCC-STHHHHHTHH
T ss_pred eEECCe-eHHHHHHHHHHhCCC--Cc--EEEEechhHHHHHHHHH----hcccccCceEEEeccCCCCC-HHHHHHHHHH
Confidence 455664 567777777776542 23 444432 2333333322 21112366665554443344 6677777766
Q ss_pred hcccCCceEEEEEcCCCCCChHHHHHHHHHhh
Q 011596 306 CSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (482)
Q Consensus 306 ~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~ 337 (482)
.. .+.+++++. +|..+.+..+.+++..+.
T Consensus 99 ~i--~~~~~~lv~-gD~~~~~~~l~~~l~~~~ 127 (296)
T 1mc3_A 99 FL--NGEPSCLVL-GDNIFFGQGFSPKLRHVA 127 (296)
T ss_dssp HH--TTSCEEEEE-TTEEEECSSCHHHHHHHT
T ss_pred Hh--CCCCEEEEE-CCccccccCHHHHHHHHH
Confidence 42 345666666 897653356777777664
No 66
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=40.56 E-value=1.3e+02 Score=28.79 Aligned_cols=89 Identities=8% Similarity=0.011 Sum_probs=45.1
Q ss_pred cCCch--HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCc------cccH
Q 011596 229 MCNEK--EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYK------AGNL 300 (482)
Q Consensus 229 ~yne~--~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~K------a~al 300 (482)
+.|+. ..+.-++.|+.... +...+.| +++++-++...+.+++ .+..++.+......-.. ..-.
T Consensus 10 ~~d~~Yl~~a~vl~~SL~~~~-s~~~l~v-lv~~~is~~~~~~L~~-------~~~~v~~v~~l~~~~~~~~~~~~~~~~ 80 (333)
T 1ll2_A 10 TTNDAYAKGALVLGSSLKQHR-TSRRLAV-LTTPQVSDTMRKALEI-------VFDEVITVDILDSGDSAHLTLMKRPEL 80 (333)
T ss_dssp ESSHHHHHHHHHHHHHHHHTT-CCSEEEE-EECTTSCHHHHHHHHH-------HCSEEEECCTTSTTSTTHHHHHHCGGG
T ss_pred EeCHHHHHHHHHHHHHHHHhC-CCCCEEE-EEcCCCCHHHHHHHHH-------hCCEEEEEeecCCcchhhcccccccch
Confidence 45655 56666777887654 3445555 5666555555444442 23444443222111100 0001
Q ss_pred HHHhhhc---ccCCceEEEEEcCCCCCCh
Q 011596 301 KSAMNCS---YVKDYEFVAIFDADFQPNP 326 (482)
Q Consensus 301 n~al~~~---~~a~~d~Vl~lDaD~~~~p 326 (482)
...+.+. ...++|-|+++|+|+++-.
T Consensus 81 ~~t~~Kl~i~~l~~ydrvlYLDaD~lv~~ 109 (333)
T 1ll2_A 81 GVTLTKLHCWSLTQYSKCVFMDADTLVLA 109 (333)
T ss_dssp HHHHHHGGGGGCTTCSEEEEECTTEEECS
T ss_pred HHHHHHHHHhHhcCCCeEEEEeCCEEecc
Confidence 1111111 1367899999999997743
No 67
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=38.36 E-value=2.9e+02 Score=26.98 Aligned_cols=106 Identities=8% Similarity=0.019 Sum_probs=59.2
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCC--CCCcc
Q 011596 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILR--DGYKA 297 (482)
Q Consensus 220 ~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~--~g~Ka 297 (482)
.+++..+|-+++..+.+++.++++ ..|. ...+|-+|..+++...+.+.+.... ..++.+...... .| ..
T Consensus 83 ~~kiAflil~h~d~~~l~rll~~l---y~p~-n~y~IHvD~ks~~~~~~~~~~~~~~----f~NV~v~~~~~~v~WG-g~ 153 (391)
T 2gak_A 83 GFPIAYSIVVHHKIEMLDRLLRAI---YMPQ-NFYCIHVDRKAEESFLAAVQGIASC----FDNVFVASQLESVVYA-SW 153 (391)
T ss_dssp TSCEEEEEEECSCHHHHHHHHHHH---CCTT-SEEEEEECTTSCHHHHHHHHHHHHT----CTTEEECSSCCCCCTT-SH
T ss_pred CCCEEEEEEecCCHHHHHHHHHHH---hCCC-CeEEEEEeCCCCHHHHHHHHHHHhc----CCCEEEeccCcccccC-Cc
Confidence 357899999999888888887766 2344 3445667777766654444333222 223333322222 22 21
Q ss_pred c-------cHHHHhhhcccCCceEEEEEcCCCCC--ChHHHHHHHHHh
Q 011596 298 G-------NLKSAMNCSYVKDYEFVAIFDADFQP--NPDFLRRTVPHF 336 (482)
Q Consensus 298 ~-------aln~al~~~~~a~~d~Vl~lDaD~~~--~pd~L~~lv~~f 336 (482)
+ .+..+++. ..+.+|++.+-+.+.| +.+.+.+.+...
T Consensus 154 S~v~A~l~ll~~aL~~--~~~w~yfilLSgsD~PLkt~~~i~~~l~~~ 199 (391)
T 2gak_A 154 TRVKADLNCMKDLYRM--NANWKYLINLCGMDFPIKTNLEIVRKLKCS 199 (391)
T ss_dssp HHHHHHHHHHHHHHHH--CSCCCEEEEEETTCEESSCHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhc--CCCCCEEEEecCCCccccCHHHHHHHHHhc
Confidence 1 12223321 2368888888887766 556666665544
No 68
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=36.20 E-value=1.2e+02 Score=26.43 Aligned_cols=78 Identities=13% Similarity=0.112 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCce
Q 011596 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYE 313 (482)
Q Consensus 234 ~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~d 313 (482)
..++.+++.+.+. -+++ ++|+++.. . + .+ . +++++.. ..... +..+++..|++. .+.|
T Consensus 41 pll~~~l~~l~~~---~~~i-~vv~~~~~-~---~-------~~-~-~~~~v~~-~~~~~-g~~~~i~~al~~---~~~~ 98 (201)
T 2e8b_A 41 KVIERVYETAKSV---FKEV-YIVAKDRE-K---F-------SF-L-NAPVVLD-EFEES-ASIIGLYTALKH---AKEE 98 (201)
T ss_dssp HHHHHHHHHHHTT---CSEE-EEEESCSG-G---G-------GG-G-TCCEEEC-CCSSC-CHHHHHHHHHHH---CSSS
T ss_pred EHHHHHHHHHHHh---CCEE-EEEeCcHH-H---h-------hc-C-CceEEec-CCCCC-CcHHHHHHHHHH---cCCC
Confidence 4677777777655 2233 33443322 2 1 11 1 5665532 11223 366778888873 3578
Q ss_pred EEEEEcCCCC-CChHHHHH-HH
Q 011596 314 FVAIFDADFQ-PNPDFLRR-TV 333 (482)
Q Consensus 314 ~Vl~lDaD~~-~~pd~L~~-lv 333 (482)
.++++++|.. ++++.+++ ++
T Consensus 99 ~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 99 NVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp EEEEEETTCTTCCHHHHHHHHH
T ss_pred CEEEEeCCcCcCCHHHHHHHHh
Confidence 9999999995 58999988 77
No 69
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=29.87 E-value=1.2e+02 Score=30.01 Aligned_cols=104 Identities=12% Similarity=0.101 Sum_probs=53.3
Q ss_pred eecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhh--------hCCCeEEEEecc-CC---CC
Q 011596 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQ--------EAGANIVYRHRI-LR---DG 294 (482)
Q Consensus 227 IP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~--------~~~v~vv~~~~~-~~---~g 294 (482)
+|..+....+..+++.+.+... ++ |+|+-+...+...+.+.+ .+. ...+.++..... .+ ..
T Consensus 46 lpi~g~~pli~~~l~~l~~~g~--~~--i~vv~~~~~~~i~~~~~~---~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~ 118 (451)
T 1yp2_A 46 VPLGANYRLIDIPVSNCLNSNI--SK--IYVLTQFNSASLNRHLSR---AYASNMGGYKNEGFVEVLAAQQSPENPDWFQ 118 (451)
T ss_dssp CEETTTEETTHHHHHHHHHTTC--CE--EEEEESCCCHHHHHHHHH---HCC--------CCEEEEEESCSSTTSCCCCC
T ss_pred eEECCcceeHHHHHHHHHHCCC--CE--EEEEeccCHHHHHHHHhh---hhhcccccccccCcEEEeccccccccccccc
Confidence 3445553677788888877643 23 344444344444333321 110 011233321111 11 12
Q ss_pred CccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhc
Q 011596 295 YKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKD 338 (482)
Q Consensus 295 ~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~ 338 (482)
+-++++..++........+.++++.+|...+.+ +.+++..+.+
T Consensus 119 Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~~~-l~~l~~~~~~ 161 (451)
T 1yp2_A 119 GTADAVRQYLWLFEEHTVLEYLILAGDHLYRMD-YEKFIQAHRE 161 (451)
T ss_dssp SHHHHHHHTHHHHTTSCCSEEEEECSCEECCCC-HHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhcCCCeEEEecCcEEEcCC-HHHHHHHHHH
Confidence 355666666653211235889999999966554 7788877654
No 70
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=29.03 E-value=2.4e+02 Score=26.04 Aligned_cols=89 Identities=8% Similarity=0.048 Sum_probs=44.9
Q ss_pred cCCch--HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCC------ccccH
Q 011596 229 MCNEK--EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY------KAGNL 300 (482)
Q Consensus 229 ~yne~--~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~------Ka~al 300 (482)
+.|+. ..+.-++.|+...+ +...+ +++++++-++...+.+++ .+.+++.+........ +...+
T Consensus 11 ~td~~Yl~ga~vL~~SL~~~~-s~~~l-vvLvt~~vs~~~~~~L~~-------~~~~vi~V~~l~~~~~~~~~~~~rp~~ 81 (263)
T 3u2u_A 11 TTNDAYAKGALVLGSSLKQHR-TTRRL-VVLATPQVSDSMRKVLET-------VFDEVIMVDVLDSGDSAHLTLMKRPEL 81 (263)
T ss_dssp ESSHHHHHHHHHHHHHHHHTT-CCSEE-EEEECTTSCHHHHHHHHH-------HSSEEEECCCCCCCCHHHHHHTTCTTG
T ss_pred EECHHHHHHHHHHHHHHHHhC-CCCCE-EEEecCCCCHHHHHHHHH-------cCCeEEEeeecCCcchhhhhhhcCcch
Confidence 45655 66667777887643 23344 445666655555555542 3455554322211100 00001
Q ss_pred HHHhhhc---ccCCceEEEEEcCCCCCCh
Q 011596 301 KSAMNCS---YVKDYEFVAIFDADFQPNP 326 (482)
Q Consensus 301 n~al~~~---~~a~~d~Vl~lDaD~~~~p 326 (482)
...+... ...++|-|+.+|+|+++-.
T Consensus 82 ~~~~~kl~~~~l~~~~~vlylD~D~~v~~ 110 (263)
T 3u2u_A 82 GVTLTKLHCWSLTQYSKCVFMDADTLVLA 110 (263)
T ss_dssp GGGGGGGGGGGCTTCSEEEEECTTEEECS
T ss_pred hHHhHHHHhccccCcceEEEEcCCEeecc
Confidence 1111110 1346899999999997744
No 71
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=27.36 E-value=82 Score=28.81 Aligned_cols=93 Identities=11% Similarity=0.152 Sum_probs=49.0
Q ss_pred eecCCchHHHHHHHHHHHh-CCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhh
Q 011596 227 IPMCNEKEVYQQSIAAVCN-LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (482)
Q Consensus 227 IP~yne~~~l~~tL~Sll~-q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~ 305 (482)
+|..+. ..+..+++++.+ ... +++.| |+-...+ ..+.+++...++....+.+++. .....| -++++..|..
T Consensus 25 lpv~gk-pli~~~l~~l~~~~gi--~~iiv-v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~G-t~~av~~a~~ 96 (255)
T 4evw_A 25 LEAHGQ-TLFEHSVNSFAAYFAS--TPFLF-IVRNVYD--TAVFVREKATQLGIKQFYIAEL-HTETRG-QAETVTLGLE 96 (255)
T ss_dssp CEETTE-EHHHHHHGGGGGGTTT--SCEEE-EEESSTT--HHHHHHHHHHHHTCSSEEEEEE-SSCCSS-HHHHHHHHHH
T ss_pred cEECCe-EHHHHHHHHHhccCCC--ceEEE-EECchhh--hHHHHHHHHHHcCCCCceEEEe-CCCCCC-HHHHHHHHHH
Confidence 344454 688899998877 342 24434 3333222 3344444433332122333333 333333 6777877776
Q ss_pred hcc---cCCceEEEEEcCCCCCChH
Q 011596 306 CSY---VKDYEFVAIFDADFQPNPD 327 (482)
Q Consensus 306 ~~~---~a~~d~Vl~lDaD~~~~pd 327 (482)
... ....+-++++.+|+...+.
T Consensus 97 ~l~~~~~~~~~~~lV~~gD~l~~~~ 121 (255)
T 4evw_A 97 ELAKQGVDYQGSITVFNIDTFRPNF 121 (255)
T ss_dssp HHHHTTCCCCSCEEECCTTEECTTC
T ss_pred HHhhcccCCCCcEEEEeCCEEEecc
Confidence 421 0234558889999877443
No 72
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=25.44 E-value=1.4e+02 Score=29.40 Aligned_cols=104 Identities=11% Similarity=0.109 Sum_probs=52.3
Q ss_pred eecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhh------CCCeEEEEecc--CCC--CCc
Q 011596 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQE------AGANIVYRHRI--LRD--GYK 296 (482)
Q Consensus 227 IP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~------~~v~vv~~~~~--~~~--g~K 296 (482)
+|..+....+..+++.+.+... ++ |+|+-+...+...+.+.+ .|.. .++.++..... ... .+-
T Consensus 38 lpi~gk~pli~~~l~~l~~~gi--~~--i~vv~~~~~~~i~~~~~~---~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt 110 (420)
T 3brk_X 38 VYFGGKARIIDFALSNALNSGI--RR--IGVATQYKAHSLIRHLQR---GWDFFRPERNESFDILPASQRVSETQWYEGT 110 (420)
T ss_dssp SEETTTEETHHHHHHHHHHTTC--CE--EEEEECTTCHHHHHHHHH---HSCCCCGGGTCEEEEECCC-------CCCCH
T ss_pred cccCCCCcHHHHHHHHHHhCCC--Ce--EEEEeCCChHHHHHHHhh---hhccccccccCCEEEeCccccccCCccccCC
Confidence 3444553678888888887653 23 334434334444443321 1210 11222211100 110 235
Q ss_pred cccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhc
Q 011596 297 AGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKD 338 (482)
Q Consensus 297 a~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~ 338 (482)
++++..++......+.|.++++.+|...+.+ +.+++..+.+
T Consensus 111 ~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~-l~~l~~~~~~ 151 (420)
T 3brk_X 111 ADAVYQNIDIIEPYAPEYMVILAGDHIYKMD-YEYMLQQHVD 151 (420)
T ss_dssp HHHHHTTHHHHHHHCCSEEEEEESSCEECBC-THHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEecccEEEchH-HHHHHHHHHH
Confidence 5666666553211235789999999965544 7778877654
No 73
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=24.66 E-value=74 Score=28.31 Aligned_cols=86 Identities=14% Similarity=0.057 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCc
Q 011596 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (482)
Q Consensus 233 ~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~ 312 (482)
...+..+++.+.+. . +++ ++++ . ..+...+. ..+ ..+..+.+........|-.+++..|++. .+.
T Consensus 45 ~pli~~~l~~l~~~-~--~~i-~vv~-~-~~~~~~~~---~~~---~~~~~~~~v~~~~~~~g~~~~i~~a~~~---~~~ 109 (232)
T 2xme_A 45 CEIILRTMKLLSPH-V--SEF-IIVA-S-RYADDIDA---FLK---DKGFNYKIVRHDRPEKGNGYSLLVAKNH---VED 109 (232)
T ss_dssp EEHHHHHHHHHGGG-E--EEE-EEEE-S-TTHHHHHH---HHT---TSCCCEEEEECSCGGGCHHHHHHTTGGG---CCS
T ss_pred EEHHHHHHHHHHHh-C--CEE-EEEe-C-ChHHHHHH---HHH---hcCCcEEEEECCCCCCCcHHHHHHHHHH---CCC
Confidence 36888888888765 2 233 3344 3 33333221 111 2233343333222111245566666663 233
Q ss_pred eEEEEEcCCCCCChHHHHHHHH
Q 011596 313 EFVAIFDADFQPNPDFLRRTVP 334 (482)
Q Consensus 313 d~Vl~lDaD~~~~pd~L~~lv~ 334 (482)
+ ++++.+|...+++.+++++.
T Consensus 110 ~-~lv~~~D~p~~~~~~~~l~~ 130 (232)
T 2xme_A 110 R-FILTMGDHVYSQQFIEKAVR 130 (232)
T ss_dssp S-EEEEETTEEECHHHHHHHTT
T ss_pred C-EEEEcCCcccCHHHHHHHHh
Confidence 4 56788998778888887765
No 74
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=23.78 E-value=1.9e+02 Score=25.86 Aligned_cols=40 Identities=25% Similarity=0.202 Sum_probs=25.9
Q ss_pred ccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhc
Q 011596 296 KAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKD 338 (482)
Q Consensus 296 Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~ 338 (482)
-++++..+... ....+.++++.+|...+ ..+.+++..+..
T Consensus 108 t~~al~~a~~~--~~~~~~~lv~~~D~~~~-~~~~~~~~~~~~ 147 (259)
T 1tzf_A 108 TGGRLKRVAEY--VKDDEAFLFTYGDGVAD-LDIKATIDFHKA 147 (259)
T ss_dssp HHHHHHHTGGG--TTTSSCEEEEETTEEEC-CCHHHHHHHHHH
T ss_pred cHHHHHHHHHh--cCCCCcEEEEECCEecc-cCHHHHHHHHHH
Confidence 55566666553 22357788889998654 457788877654
No 75
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=23.71 E-value=2.4e+02 Score=25.98 Aligned_cols=81 Identities=11% Similarity=0.001 Sum_probs=45.5
Q ss_pred EEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCceEEEEEcCCC-CCChHHHHHHH
Q 011596 255 IQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADF-QPNPDFLRRTV 333 (482)
Q Consensus 255 IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~-~~~pd~L~~lv 333 (482)
|++|+++..+.....+.+..+ +.++.+.+.....-. . .. .. .+++|.|++.|... .++++.++.+.
T Consensus 7 vLiV~g~~~~~~a~~l~~aL~---~~g~~V~~i~~~~~~--~--~~-~~-----L~~yDvIIl~d~~~~~l~~~~~~~L~ 73 (259)
T 3rht_A 7 VLYCGDTSLETAAGYLAGLMT---SWQWEFDYIPSHVGL--D--VG-EL-----LAKQDLVILSDYPAERMTAQAIDQLV 73 (259)
T ss_dssp EEEEESSCTTTTHHHHHHHHH---HTTCCCEEECTTSCB--C--SS-HH-----HHTCSEEEEESCCGGGBCHHHHHHHH
T ss_pred EEEECCCCchhHHHHHHHHHH---hCCceEEEecccccc--c--Ch-hH-----HhcCCEEEEcCCccccCCHHHHHHHH
Confidence 556676544333333333333 456666655322111 1 00 11 35899999998775 57888888888
Q ss_pred HHhhcCCCeEEEeee
Q 011596 334 PHFKDNEELGLVQAR 348 (482)
Q Consensus 334 ~~f~~~p~v~~V~~~ 348 (482)
.+.++...+.++.+.
T Consensus 74 ~yV~~GGgLi~~gG~ 88 (259)
T 3rht_A 74 TMVKAGCGLVMLGGW 88 (259)
T ss_dssp HHHHTTCEEEEECST
T ss_pred HHHHhCCeEEEecCc
Confidence 888754444444444
No 76
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=21.24 E-value=4.3e+02 Score=23.42 Aligned_cols=94 Identities=10% Similarity=0.109 Sum_probs=53.3
Q ss_pred EEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHH
Q 011596 223 VLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKS 302 (482)
Q Consensus 223 VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~ 302 (482)
.-|.|-+-+....+...++.+.+..++. ++.. |+-|..+....+.++ +.++.+..... ...+...+..
T Consensus 9 ~ri~vl~SG~gsnl~all~~~~~~~~~~-~I~~-Vis~~~~a~~l~~A~-------~~gIp~~~~~~---~~~~~~~~~~ 76 (215)
T 3kcq_A 9 LRVGVLISGRGSNLEALAKAFSTEESSV-VISC-VISNNAEARGLLIAQ-------SYGIPTFVVKR---KPLDIEHIST 76 (215)
T ss_dssp EEEEEEESSCCHHHHHHHHHTCCC-CSE-EEEE-EEESCTTCTHHHHHH-------HTTCCEEECCB---TTBCHHHHHH
T ss_pred CEEEEEEECCcHHHHHHHHHHHcCCCCc-EEEE-EEeCCcchHHHHHHH-------HcCCCEEEeCc---ccCChHHHHH
Confidence 3444555566778888888776544432 4444 444433333222232 56788765421 1223334445
Q ss_pred HhhhcccCCceEEEEEcCCCCCChHHHHH
Q 011596 303 AMNCSYVKDYEFVAIFDADFQPNPDFLRR 331 (482)
Q Consensus 303 al~~~~~a~~d~Vl~lDaD~~~~pd~L~~ 331 (482)
.++ ..+.|++++..=--+++++.+..
T Consensus 77 ~L~---~~~~Dlivlagy~~IL~~~~l~~ 102 (215)
T 3kcq_A 77 VLR---EHDVDLVCLAGFMSILPEKFVTD 102 (215)
T ss_dssp HHH---HTTCSEEEESSCCSCCCHHHHHH
T ss_pred HHH---HhCCCEEEEeCCceEeCHHHHhh
Confidence 555 56788988888777888877754
Done!