Query 011600
Match_columns 481
No_of_seqs 336 out of 1759
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 11:30:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011600.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011600hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 7E-64 2.4E-68 520.5 30.0 342 121-478 5-398 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 2.2E-59 7.7E-64 485.9 29.9 337 124-481 9-395 (403)
3 1t6e_X Xylanase inhibitor; two 100.0 2.1E-56 7.2E-61 460.3 30.7 326 125-479 3-373 (381)
4 3psg_A Pepsinogen; hydrolase(a 100.0 6.2E-56 2.1E-60 454.9 30.8 304 125-479 46-370 (370)
5 1tzs_A Cathepsin E; hydrolase, 100.0 2.2E-55 7.7E-60 447.8 30.7 307 125-481 13-344 (351)
6 1dpj_A Proteinase A; proteinas 100.0 4E-55 1.4E-59 442.1 31.2 302 126-479 4-329 (329)
7 2x0b_A Renin; hydrolase-hormon 100.0 9.3E-56 3.2E-60 455.0 26.6 304 125-479 51-383 (383)
8 3cms_A Chymosin B; hydrolase, 100.0 1.8E-55 6.1E-60 443.6 27.5 301 126-479 5-323 (323)
9 1mpp_A Pepsin; hydrolase(acid 100.0 2E-55 6.8E-60 449.9 27.7 313 123-481 6-357 (361)
10 1j71_A Candidapepsin, aspartic 100.0 3E-55 1E-59 444.0 27.5 297 125-481 3-326 (334)
11 1am5_A Pepsin, acid proteinase 100.0 9.1E-55 3.1E-59 438.5 30.0 302 125-479 2-324 (324)
12 3fv3_A SAPP1P-secreted asparti 100.0 8.7E-55 3E-59 441.2 29.5 300 125-481 3-331 (339)
13 2qzx_A Candidapepsin-5; aspart 100.0 1E-54 3.4E-59 441.4 29.1 300 125-481 3-333 (342)
14 3c9x_A Trichoderma reesei aspa 100.0 1E-54 3.6E-59 439.1 27.9 298 135-478 12-329 (329)
15 1oew_A Endothiapepsin; hydrola 100.0 1.8E-54 6.2E-59 437.3 27.6 296 136-478 13-329 (329)
16 2apr_A Rhizopuspepsin; hydrola 100.0 3.2E-54 1.1E-58 434.9 29.3 295 135-479 12-324 (325)
17 4aa9_A Chymosin; hydrolase, as 100.0 1.4E-54 4.7E-59 436.4 25.8 296 134-479 7-320 (320)
18 1htr_B Gastricsin; aspartyl pr 100.0 2.1E-54 7.1E-59 436.8 27.0 302 127-479 5-329 (329)
19 3k1w_A Renin; protease, altern 100.0 4E-54 1.4E-58 436.6 27.0 306 123-479 6-340 (341)
20 1miq_A Plasmepsin; aspartic pr 100.0 1.2E-53 4.2E-58 438.6 30.5 300 125-479 52-374 (375)
21 3pvk_A Candidapepsin-2; hydrol 100.0 1.4E-53 4.8E-58 432.8 28.7 301 125-481 3-333 (342)
22 2ewy_A Beta-secretase 2; BACE2 100.0 1.6E-53 5.6E-58 439.0 29.4 307 137-481 12-357 (383)
23 2bju_A Plasmepsin II; aspartic 100.0 1.2E-53 4.3E-58 446.7 26.1 301 125-479 128-450 (453)
24 1qdm_A Prophytepsin; aspartic 100.0 4.8E-53 1.6E-57 446.2 30.6 317 125-479 42-478 (478)
25 2qp8_A Beta-secretase 1; BACE1 100.0 5.3E-53 1.8E-57 437.0 28.5 309 137-481 20-369 (395)
26 3vf3_A Beta-secretase 1; struc 100.0 1.2E-52 4.2E-57 435.2 30.5 311 137-481 27-376 (402)
27 3lpj_A Beta-secretase 1; alzhe 100.0 8.6E-53 2.9E-57 443.1 28.8 311 137-481 73-422 (455)
28 1yg9_A Aspartic protease BLA G 100.0 6.3E-53 2.1E-57 426.3 25.9 303 125-479 7-329 (330)
29 3qvc_A Histo-aspartic protease 100.0 1.6E-52 5.5E-57 438.7 27.5 300 125-479 127-449 (451)
30 1ibq_A Aspergillopepsin; aspar 100.0 5.5E-52 1.9E-56 418.5 27.4 294 136-479 12-325 (325)
31 1izd_A Aspartic proteinase; su 100.0 4.9E-52 1.7E-56 418.6 26.7 293 136-479 13-323 (323)
32 1bxo_A Protein (penicillopepsi 100.0 7.2E-52 2.5E-56 417.3 24.4 292 136-479 13-323 (323)
33 1wkr_A Polyporopepsin; hydrola 100.0 2.9E-51 9.8E-56 415.7 28.8 296 126-481 4-335 (340)
34 1b5f_A Protein (cardosin A); h 100.0 1.2E-41 4.1E-46 328.4 19.7 219 126-381 4-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 9.6E-35 3.3E-39 280.2 21.7 215 246-479 3-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 6.9E-23 2.4E-27 169.0 10.0 90 126-244 4-96 (97)
37 1b5f_B Protein (cardosin A); h 99.6 6.8E-16 2.3E-20 124.5 8.2 80 399-479 3-87 (87)
38 2i1a_A DNA damage-inducible pr 89.8 0.7 2.4E-05 39.6 6.9 108 328-476 25-134 (148)
39 3s8i_A Protein DDI1 homolog 1; 89.0 0.49 1.7E-05 41.0 5.2 109 328-477 23-134 (148)
40 1fmb_A EIAV protease; hydrolas 78.1 2 6.8E-05 34.8 4.0 25 141-167 10-34 (104)
41 2hs1_A HIV-1 protease; ultra-h 77.7 2 7E-05 34.4 3.8 28 141-170 10-37 (99)
42 3liy_A Protease; hydrolase, hy 73.9 2.8 9.7E-05 34.3 3.7 31 141-171 12-45 (116)
43 3ec0_A Protease; HIV-2, inhibi 72.3 3.4 0.00011 33.1 3.8 28 141-170 10-37 (99)
44 2i1a_A DNA damage-inducible pr 68.9 4.2 0.00014 34.6 4.1 30 136-167 23-52 (148)
45 2hah_A Protease, retropepsin; 66.4 4.9 0.00017 33.1 3.7 25 141-168 16-40 (116)
46 3sqf_A Protease; folded monome 61.7 7.6 0.00026 31.8 4.0 28 141-170 11-38 (114)
47 3s8i_A Protein DDI1 homolog 1; 55.7 9.4 0.00032 32.7 3.8 30 137-168 22-51 (148)
48 1lya_A Cathepsin D; lysosomal 48.4 19 0.00066 28.2 4.3 40 318-370 5-44 (97)
49 2rsp_A RSV protease; hydrolase 45.8 15 0.00052 30.5 3.3 22 150-171 29-50 (124)
50 3slz_A GAG-Pro-POL polyprotein 45.7 18 0.00061 30.4 3.8 28 140-169 23-50 (132)
51 3ka2_A [L-Ala51;Gly51']HIV-1 p 42.6 19 0.00066 32.5 3.8 27 140-168 9-35 (203)
52 1bxo_A Protein (penicillopepsi 33.1 36 0.0012 32.6 4.4 40 315-371 6-45 (323)
53 1izd_A Aspartic proteinase; su 31.9 39 0.0013 32.4 4.4 41 315-372 6-46 (323)
54 1ibq_A Aspergillopepsin; aspar 30.8 39 0.0013 32.4 4.2 33 327-372 13-45 (325)
55 1mpp_A Pepsin; hydrolase(acid 25.9 65 0.0022 31.2 4.9 45 313-370 5-49 (361)
56 3ka2_A [L-Ala51;Gly51']HIV-1 p 24.7 58 0.002 29.3 3.8 27 141-169 114-140 (203)
57 3cms_A Chymosin B; hydrolase, 23.7 47 0.0016 31.7 3.3 43 315-370 3-45 (323)
58 3vla_A EDGP; extracellular, in 22.8 58 0.002 32.5 3.9 43 315-369 8-50 (413)
59 2apr_A Rhizopuspepsin; hydrola 21.9 83 0.0028 30.0 4.7 33 327-370 14-46 (325)
60 3aup_A SBG7S, BG, basic 7S glo 21.8 49 0.0017 32.8 3.0 42 317-370 11-52 (403)
61 1b5f_A Protein (cardosin A); h 20.8 74 0.0025 28.9 3.9 33 327-370 12-44 (239)
62 1oew_A Endothiapepsin; hydrola 20.7 85 0.0029 30.0 4.5 33 327-370 14-46 (329)
63 1wkr_A Polyporopepsin; hydrola 20.5 90 0.0031 29.9 4.6 39 317-369 4-42 (340)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=7e-64 Score=520.53 Aligned_cols=342 Identities=24% Similarity=0.428 Sum_probs=286.6
Q ss_pred cCCceeeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcccccccCCCCCCCCCCCCccccccCCCcc
Q 011600 121 QSDDATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTI 200 (481)
Q Consensus 121 ~~~~~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~~~C~~~~~~~f~ps~SsT~~~~~C~s~~ 200 (481)
..+.+.+|++.+ ..+++|+++|.||||||++.|++||||+++||+|++| .+|+||+.++|.++.
T Consensus 5 ~~~~~~~pv~~d--~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c--------------~~Sst~~~v~C~s~~ 68 (413)
T 3vla_A 5 RPSALVVPVKKD--ASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN--------------YVSSTYRPVRCRTSQ 68 (413)
T ss_dssp CCSEEEEEEEEC--TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS--------------CCCTTCEECBTTSHH
T ss_pred CCccEEEEeeec--CCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC--------------CCCCCcCccCCCccc
Confidence 345678999865 4689999999999999999999999999999999875 279999999999999
Q ss_pred cccccccCC------CCCCCCCCCceeeEEc-CCCCeEEEEEEEEEEEeCC--------CcccCceEEEEEEec--CCCC
Q 011600 201 CTSLQSATG------NSPACASSTCLYGIQY-GDSSFSIGFFGKETLTLTP--------RDVFPNFLFGCGQNN--RGLF 263 (481)
Q Consensus 201 C~~~~~~~~------~~~~C~~~~c~y~~~Y-gdgs~~~G~~~~Dtltl~~--------~~~~~~~~FGc~~~~--~g~~ 263 (481)
|.....+.. ....|.++.|.|.+.| +|++.+.|++++|+|+|+. ...++++.|||++.+ .+.+
T Consensus 69 C~~~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~ 148 (413)
T 3vla_A 69 CSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLA 148 (413)
T ss_dssp HHHTTCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSC
T ss_pred ccccccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcc
Confidence 997654311 0135666779999999 5888899999999999973 146789999999986 4566
Q ss_pred CCcceeeecCCCCCchhhhhhhhc--CCceEEeccCCCCCCceEEeCCCCC---------CC-ceEeecccCCCC-----
Q 011600 264 GGAAGLMGLGRDPISLVSQTATKY--KKLFSYCLPSSASSTGHLTFGPGAS---------KS-VQFTPLSSISGG----- 326 (481)
Q Consensus 264 ~~~~GilGLg~~~~Sl~sQ~~~~~--~~~FS~cL~~~~~~~G~L~fGg~d~---------~~-~~~tpl~~~~~~----- 326 (481)
...+||||||++++|+++|+..+. .++|||||++.....|+|+||+.+. ++ +.||||+.++..
T Consensus 149 ~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~ 228 (413)
T 3vla_A 149 SGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATS 228 (413)
T ss_dssp TTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSC
T ss_pred cccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccc
Confidence 789999999999999999998764 4899999998655689999999763 45 999999986532
Q ss_pred -----CccEEEEEeEEEEccEEeeecccccc-----cCCeEEeccCceeecCHHHHHHHHHHHHHhhh--cCCCCCCCCc
Q 011600 327 -----SSFYGLEMIGISVGGQKLSIAASVFT-----TAGTIIDSGTVITRLPPDAYTPLRTAFRQFMS--KYPTAPALSL 394 (481)
Q Consensus 327 -----~~~y~V~l~gIsVgg~~l~~~~~~f~-----~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~--~~~~~~~~~~ 394 (481)
..+|+|+|++|+||++.+.+++..|. .+++||||||++|+||+++|++|+++|.+++. +++...+...
T Consensus 229 ~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~ 308 (413)
T 3vla_A 229 TQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAP 308 (413)
T ss_dssp CTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTT
T ss_pred cccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCC
Confidence 27999999999999999998877663 26899999999999999999999999999876 3443334456
Q ss_pred ccceeeccCCcc----cccCeEEEEEcC-CeEEEECCCCcEEEeCCCceEEEEEeCCCC-CCceeecHhhhceeEEEEEC
Q 011600 395 LDTCYDFSKYST----VTLPQISLFFSG-GVEVSVDKTGIMYASNISQVCLAFAGNSDP-TDVSIFGNTQQHTLEVVYDV 468 (481)
Q Consensus 395 ~~~Cy~~~~~~~----~~~P~i~f~f~g-g~~~~l~~~~~l~~~~~~~~Cla~~~~~~~-~~~~IlG~~fl~~~~vvfD~ 468 (481)
++.||+.++... ..+|+|+|+|.| +++++|++++|+++...+..|++|+..+.. .+.||||++|||++|+|||+
T Consensus 309 ~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~ 388 (413)
T 3vla_A 309 FGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDL 388 (413)
T ss_dssp CSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEET
T ss_pred CcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEEC
Confidence 789999876532 479999999965 489999999999987667789998876322 35799999999999999999
Q ss_pred CCCEEEEEeC
Q 011600 469 AGGKVGFAAG 478 (481)
Q Consensus 469 ~~~rIGFa~~ 478 (481)
+++|||||++
T Consensus 389 ~~~riGfa~~ 398 (413)
T 3vla_A 389 ATSRVGFSGT 398 (413)
T ss_dssp TTTEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 9999999985
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=2.2e-59 Score=485.94 Aligned_cols=337 Identities=23% Similarity=0.434 Sum_probs=271.8
Q ss_pred ceeeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcccccccCCCCCCCCCCCCccccccCCCccccc
Q 011600 124 DATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTS 203 (481)
Q Consensus 124 ~~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~ 203 (481)
.+.+|+.. +..+++|+++|.||||||++.|+|||||+++||+|.+| .+|+||+.++|.++.|..
T Consensus 9 ~~~~pl~~--~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~--------------~~Sst~~~~~C~s~~C~~ 72 (403)
T 3aup_A 9 LVVLPVQN--DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ--------------YSSKTYQAPFCHSTQCSR 72 (403)
T ss_dssp CEEEEEEE--CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC--------------CCCSSCBCCCTTBHHHHH
T ss_pred cEEEeeec--CCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC--------------CCCCCCCccCCCCccccC
Confidence 46788873 34678999999999999999999999999999999864 379999999999999987
Q ss_pred cccc------CCCCCCCCCCCceeeEEcC-CCCeEEEEEEEEEEEeCCC----------cccCceEEEEEEecC---CCC
Q 011600 204 LQSA------TGNSPACASSTCLYGIQYG-DSSFSIGFFGKETLTLTPR----------DVFPNFLFGCGQNNR---GLF 263 (481)
Q Consensus 204 ~~~~------~~~~~~C~~~~c~y~~~Yg-dgs~~~G~~~~Dtltl~~~----------~~~~~~~FGc~~~~~---g~~ 263 (481)
...+ ......|.++.|.|.+.|+ |++.+.|.+++|+|+|++. ..++++.|||++... +.+
T Consensus 73 ~~~~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~ 152 (403)
T 3aup_A 73 ANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLP 152 (403)
T ss_dssp TTCCCEEECSSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSS
T ss_pred ccccCccccCCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCC
Confidence 6543 1112357667899999998 7888999999999999762 468899999999874 344
Q ss_pred CCcceeeecCCCCCchhhhhhhhc--CCceEEeccCCCCCCceEEeCCCCC-------C-----CceEeecccCCCCCcc
Q 011600 264 GGAAGLMGLGRDPISLVSQTATKY--KKLFSYCLPSSASSTGHLTFGPGAS-------K-----SVQFTPLSSISGGSSF 329 (481)
Q Consensus 264 ~~~~GilGLg~~~~Sl~sQ~~~~~--~~~FS~cL~~~~~~~G~L~fGg~d~-------~-----~~~~tpl~~~~~~~~~ 329 (481)
...+||||||++.+++++|+.... .++|||||++.....|.|+||+ |+ + ++.|+|++.++ ..+
T Consensus 153 ~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~--~~~ 229 (403)
T 3aup_A 153 RNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITL--QGE 229 (403)
T ss_dssp TTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECT--TSC
T ss_pred CCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCC--CCc
Confidence 578999999999999999987642 5899999998655689999999 42 3 89999999854 368
Q ss_pred EEEEEeEEEEccEEe-eecccccc-----cCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccC
Q 011600 330 YGLEMIGISVGGQKL-SIAASVFT-----TAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSK 403 (481)
Q Consensus 330 y~V~l~gIsVgg~~l-~~~~~~f~-----~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~ 403 (481)
|.|+|++|+|+++.+ .++...+. .+++||||||++++||+++|++|+++|.+++..++.......++.||+.
T Consensus 230 y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c-- 307 (403)
T 3aup_A 230 YNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNS-- 307 (403)
T ss_dssp EEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECG--
T ss_pred ceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEEC--
Confidence 999999999999998 77766552 2579999999999999999999999998876443322222345678764
Q ss_pred CcccccCeEEEEEcCC--eEEEECCCCcEEEeCCCceEEEEEeCCCC-CCceeecHhhhceeEEEEECCCCEEEE-----
Q 011600 404 YSTVTLPQISLFFSGG--VEVSVDKTGIMYASNISQVCLAFAGNSDP-TDVSIFGNTQQHTLEVVYDVAGGKVGF----- 475 (481)
Q Consensus 404 ~~~~~~P~i~f~f~gg--~~~~l~~~~~l~~~~~~~~Cla~~~~~~~-~~~~IlG~~fl~~~~vvfD~~~~rIGF----- 475 (481)
.....+|.|+|+|.|+ ++++|++++|+++...+..|++|+..+.. .+.||||+.|||++|+|||++++||||
T Consensus 308 ~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~~ 387 (403)
T 3aup_A 308 NKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSL 387 (403)
T ss_dssp GGCCCCCCEEEEESSTTCCEEEECHHHHEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESSCG
T ss_pred CCcCcCCcEEEEEcCCCceEEEEcccceEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEecccc
Confidence 3334799999999765 69999999999987656789999876432 357999999999999999999999999
Q ss_pred --EeCCCC
Q 011600 476 --AAGGCS 481 (481)
Q Consensus 476 --a~~~C~ 481 (481)
++++|+
T Consensus 388 ~~~~~~C~ 395 (403)
T 3aup_A 388 HSHGVKCA 395 (403)
T ss_dssp GGGTCCGG
T ss_pred cccCCCcc
Confidence 788884
No 3
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2.1e-56 Score=460.32 Aligned_cols=326 Identities=22% Similarity=0.445 Sum_probs=262.7
Q ss_pred eeeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcccccccCCCCCCCCCCCCccccccCCCcccccc
Q 011600 125 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSL 204 (481)
Q Consensus 125 ~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~~ 204 (481)
+.+|++. +..+.+|+++|.|||| |+|||||+++||+|.+|. +|+.++|.++.|...
T Consensus 3 ~~~pv~~--~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~-----------------~~~~~~C~s~~C~~~ 58 (381)
T 1t6e_X 3 VLAPVTK--DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ-----------------PPAEIPCSSPTCLLA 58 (381)
T ss_dssp EEEEEEE--CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC-----------------CCCCCBTTSHHHHHH
T ss_pred eEEeEEe--cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC-----------------CCCccCCCCchhccc
Confidence 4567763 4567899999999998 999999999999998651 356788988888765
Q ss_pred cccCCCCCCCC---------CCCc-eeeEEcCCCCeEEEEEEEEEEEeCC---CcccCce----EEEEEEec--CCCCCC
Q 011600 205 QSATGNSPACA---------SSTC-LYGIQYGDSSFSIGFFGKETLTLTP---RDVFPNF----LFGCGQNN--RGLFGG 265 (481)
Q Consensus 205 ~~~~~~~~~C~---------~~~c-~y~~~Ygdgs~~~G~~~~Dtltl~~---~~~~~~~----~FGc~~~~--~g~~~~ 265 (481)
..+ +...|+ +..| .|.+.|+||+.+.|++++|+|+|++ ...++++ .|||++.+ .+.+..
T Consensus 59 ~~~--~~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~~~~ 136 (381)
T 1t6e_X 59 NAY--PAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRG 136 (381)
T ss_dssp HSS--CCTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTT
T ss_pred cCC--CCCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCCCCC
Confidence 432 123454 2357 5999999999889999999999984 2355665 57999987 445568
Q ss_pred cceeeecCCCCCchhhhhhhh--cCCceEEeccCCCCCCceEEeCCCCC------CCceEeecccCCCCCccEEEEEeEE
Q 011600 266 AAGLMGLGRDPISLVSQTATK--YKKLFSYCLPSSASSTGHLTFGPGAS------KSVQFTPLSSISGGSSFYGLEMIGI 337 (481)
Q Consensus 266 ~~GilGLg~~~~Sl~sQ~~~~--~~~~FS~cL~~~~~~~G~L~fGg~d~------~~~~~tpl~~~~~~~~~y~V~l~gI 337 (481)
.+||||||++++|+++|+..+ .+++|||||++. ..|+|+||+.+. +++.|+|++.++.. .+|+|+|++|
T Consensus 137 ~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~--~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~-~~y~v~l~~i 213 (381)
T 1t6e_X 137 STGVAGLANSGLALPAQVASAQKVANRFLLCLPTG--GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGS-PAHYISARSI 213 (381)
T ss_dssp EEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSS--SCEEEEESCCSCSCHHHHTTCCEEECBCCTTC-CSCEECEEEE
T ss_pred CceEEEeCCCcchhHHHHhhhcccCceEEEEeCCC--CCeeEEeCCcccccccccCcceeeccccCCCC-cceEEEEEEE
Confidence 999999999999999999864 378999999875 579999999763 68999999986543 4577999999
Q ss_pred EEccEEeeecccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhh-------cCCCC-CCCCcccceeeccCCc----
Q 011600 338 SVGGQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMS-------KYPTA-PALSLLDTCYDFSKYS---- 405 (481)
Q Consensus 338 sVgg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~-------~~~~~-~~~~~~~~Cy~~~~~~---- 405 (481)
+||++.+.++...|..+++||||||++++||+++|++|+++|.+++. .++.. .....++.||+.++..
T Consensus 214 ~vg~~~~~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~ 293 (381)
T 1t6e_X 214 VVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLG 293 (381)
T ss_dssp EETTEECCCCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETT
T ss_pred EEcCEEecCCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCccccc
Confidence 99999998887767557899999999999999999999999999875 23332 2234567899887542
Q ss_pred ccccCeEEEEEcCCeEEEECCCCcEEEeCCCceEEEEEeCCC------CCCceeecHhhhceeEEEEECCCCEEEEEeCC
Q 011600 406 TVTLPQISLFFSGGVEVSVDKTGIMYASNISQVCLAFAGNSD------PTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 406 ~~~~P~i~f~f~gg~~~~l~~~~~l~~~~~~~~Cla~~~~~~------~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~ 479 (481)
...+|+|+|+|.||++++|++++|+++...+..|++|+..+. ..+.||||+.|||++|+|||++++|||||++.
T Consensus 294 ~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~ 373 (381)
T 1t6e_X 294 GYAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLP 373 (381)
T ss_dssp EECCCCEEEEETTSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECC
T ss_pred CCcCCeEEEEECCCcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEeccc
Confidence 147899999997679999999999998655678999987643 12579999999999999999999999999854
No 4
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=6.2e-56 Score=454.85 Aligned_cols=304 Identities=25% Similarity=0.413 Sum_probs=251.4
Q ss_pred eeeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcc-cccccCCCCCCCCCCCCccccccCCCccccc
Q 011600 125 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV-KYCYEQKEPKFDPTVSQSYSNVSCSSTICTS 203 (481)
Q Consensus 125 ~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~-~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~ 203 (481)
...|+. ++.+.+|+++|+||||||++.|++||||+++||+|..|. ..|.. ++.|||++|+||+...
T Consensus 46 ~~~~l~---n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~--~~~y~~~~SsT~~~~~-------- 112 (370)
T 3psg_A 46 GDEPLE---NYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSD--HNQFNPDDSSTFEATS-------- 112 (370)
T ss_dssp CCCTTG---GGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTT--SCCBCGGGCTTCEEEE--------
T ss_pred ceecce---eccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCC--CCCCCCccCcCcEECC--------
Confidence 456665 456889999999999999999999999999999999994 24654 4899999999999875
Q ss_pred ccccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCCC-C--CCcceeeecCCCCCch-
Q 011600 204 LQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGL-F--GGAAGLMGLGRDPISL- 279 (481)
Q Consensus 204 ~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g~-~--~~~~GilGLg~~~~Sl- 279 (481)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||++...+. | ...+||||||++.++.
T Consensus 113 ---------------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~-~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~ 175 (370)
T 3psg_A 113 ---------------QELSITYGTGS-MTGILGYDTVQVGG-ISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISAS 175 (370)
T ss_dssp ---------------EEEEEESSSCE-EEEEEEEEEEEETT-EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGG
T ss_pred ---------------cEEEEEeCCce-EEEEEEEEEEeeCC-cccCCeEEEEEEeecccccccCCccceeccCCcccccc
Confidence 79999999998 89999999999998 69999999999988762 3 3689999999987653
Q ss_pred -----hhhhhhh---cCCceEEeccCCCCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEeeec
Q 011600 280 -----VSQTATK---YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIA 347 (481)
Q Consensus 280 -----~sQ~~~~---~~~~FS~cL~~~~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~ 347 (481)
..++..+ ..++||+||.+.....|.|+|||+|+ +++.|+|+.. ..+|.|+|++|+|+++.+...
T Consensus 176 ~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~----~~~w~v~l~~i~v~g~~~~~~ 251 (370)
T 3psg_A 176 GATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSV----EGYWQITLDSITMDGETIACS 251 (370)
T ss_dssp GCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSE----ETTEEEEECEEESSSSEEECT
T ss_pred CCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeecccc----cceeEEEEeEEEECCEEEecC
Confidence 3344433 26899999998755689999999885 7999999987 678999999999999887643
Q ss_pred ccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCeEEEECCC
Q 011600 348 ASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKT 427 (481)
Q Consensus 348 ~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~l~~~ 427 (481)
.. ..+||||||++++||++++++|.+++++.. ... .+|.++|.....+|+|+|+| ||.++.|+++
T Consensus 252 ~~----~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~----~~~------g~~~v~C~~~~~lP~i~f~~-~g~~~~l~~~ 316 (370)
T 3psg_A 252 GG----CQAIVDTGTSLLTGPTSAIANIQSDIGASE----NSD------GEMVISCSSIDSLPDIVFTI-DGVQYPLSPS 316 (370)
T ss_dssp TC----EEEEECTTCCSEEEEHHHHHHHHHHTTCEE----CTT------CCEECCGGGGGGCCCEEEEE-TTEEEEECHH
T ss_pred CC----ceEEEcCCCCcEECCHHHHHHHHHHhCCcc----cCC------CcEEEECCCcccCCcEEEEE-CCEEEEECHH
Confidence 22 469999999999999999999999987652 111 24667777667899999999 7899999999
Q ss_pred CcEEEeCCCceEE-EEEeCCC---CCCceeecHhhhceeEEEEECCCCEEEEEeCC
Q 011600 428 GIMYASNISQVCL-AFAGNSD---PTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 428 ~~l~~~~~~~~Cl-a~~~~~~---~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~ 479 (481)
+|+++ .+..|+ +|.+.+. .+..||||++|||++|+|||++++|||||++.
T Consensus 317 ~yi~~--~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 317 AYILQ--DDDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp HHEEE--CSSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred Hhccc--CCCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 99998 345799 5766431 23479999999999999999999999999974
No 5
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.2e-55 Score=447.84 Aligned_cols=307 Identities=23% Similarity=0.414 Sum_probs=250.8
Q ss_pred eeeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcc-cccccCCCCCCCCCCCCccccccCCCccccc
Q 011600 125 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV-KYCYEQKEPKFDPTVSQSYSNVSCSSTICTS 203 (481)
Q Consensus 125 ~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~-~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~ 203 (481)
..+|+. +..+.+|+++|.||||+|++.|++||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 13 ~~~~l~---n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~-------- 79 (351)
T 1tzs_A 13 AKEPLI---NYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTH--SRFQPSQSSTYSQPG-------- 79 (351)
T ss_dssp -CCTTG---GGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTS--CCBCGGGCTTCBCCS--------
T ss_pred cceece---ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCC--CcCCcccCcceEECC--------
Confidence 456766 345789999999999999999999999999999999995 368754 899999999998864
Q ss_pred ccccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCCC-C--CCcceeeecCCCCCc--
Q 011600 204 LQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGL-F--GGAAGLMGLGRDPIS-- 278 (481)
Q Consensus 204 ~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g~-~--~~~~GilGLg~~~~S-- 278 (481)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||++...+. | ...+||||||+..++
T Consensus 80 ---------------~~~~i~Yg~Gs-~~G~~~~D~v~ig~-~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 142 (351)
T 1tzs_A 80 ---------------QSFSIQYGTGS-LSGIIGADQVSVEG-LTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVG 142 (351)
T ss_dssp ---------------CEEEEESSSCE-EEEEEEEEEEEETT-EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGG
T ss_pred ---------------CEEEEEeCCCC-eEEEEEEeEEEECC-eEECCeEEEEEEeccccccccCCCceEEecCCcccccc
Confidence 79999999997 78999999999998 68999999999987662 3 368999999998776
Q ss_pred ----hhhhhhhh---cCCceEEeccCCCCC--CceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEee
Q 011600 279 ----LVSQTATK---YKKLFSYCLPSSASS--TGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLS 345 (481)
Q Consensus 279 ----l~sQ~~~~---~~~~FS~cL~~~~~~--~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~ 345 (481)
++.|+..+ ..++||+||.+.... .|.|+|||+|+ +++.|+|+.. ..+|.|.|++|+|+++.+.
T Consensus 143 ~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~ 218 (351)
T 1tzs_A 143 GVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTK----QAYWQIALDNIQVGGTVMF 218 (351)
T ss_dssp GCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSE----ETTEEEEEEEEEETTEEEE
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCC----CceEEEEeCEEEECCceEE
Confidence 33444443 268999999986443 79999999874 6899999987 5799999999999998864
Q ss_pred ecccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCeEEEEC
Q 011600 346 IAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVD 425 (481)
Q Consensus 346 ~~~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~l~ 425 (481)
.... ..+||||||++++||+++|++|.+++++.. .. +. |.++|.....+|+|+|+| +|++++|+
T Consensus 219 ~~~~----~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~---~~--g~------~~~~C~~~~~~P~i~f~f-~g~~~~i~ 282 (351)
T 1tzs_A 219 CSEG----CQAIVDTGTSLITGPSDKIKQLQNAIGAAP---VD--GE------YAVECANLNVMPDVTFTI-NGVPYTLS 282 (351)
T ss_dssp CTTC----EEEEECTTCSSEEECHHHHHHHHHHHTCEE---CS--SS------EEECGGGGGGSCCEEEEE-TTEEEEEC
T ss_pred cCCC----ceEEeccCCcceeCCHHHHHHHHHHhCCcc---cC--Ce------EEEeCCCCccCCcEEEEE-CCEEEEEC
Confidence 3221 469999999999999999999999987652 11 21 334455455799999999 78999999
Q ss_pred CCCcEEEeCC--CceEE-EEEeCCC---CCCceeecHhhhceeEEEEECCCCEEEEEeCCCC
Q 011600 426 KTGIMYASNI--SQVCL-AFAGNSD---PTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 481 (481)
Q Consensus 426 ~~~~l~~~~~--~~~Cl-a~~~~~~---~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~C~ 481 (481)
+++|+++... +..|+ +|.+.+. ..+.||||+.|||++|+|||++++|||||+++|.
T Consensus 283 ~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~ 344 (351)
T 1tzs_A 283 PTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPW 344 (351)
T ss_dssp TTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC--
T ss_pred HHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcc
Confidence 9999987532 46899 6876531 3467999999999999999999999999999983
No 6
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=4e-55 Score=442.09 Aligned_cols=302 Identities=23% Similarity=0.441 Sum_probs=253.0
Q ss_pred eeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCccc-ccccCCCCCCCCCCCCccccccCCCcccccc
Q 011600 126 TLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVK-YCYEQKEPKFDPTVSQSYSNVSCSSTICTSL 204 (481)
Q Consensus 126 ~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~~-~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~~ 204 (481)
.+|+. +..+.+|+++|.||||+|++.|++||||+++||+|.+|.. .|..+ +.|||++|+||+...
T Consensus 4 ~~~l~---~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~--------- 69 (329)
T 1dpj_A 4 DVPLT---NYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLH--SKYDHEASSSYKANG--------- 69 (329)
T ss_dssp EEECE---EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS--CCBCGGGCTTCEEEE---------
T ss_pred ceeee---ecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCc--CcCCcccCcCeEECC---------
Confidence 46766 3457899999999999999999999999999999999953 58765 799999999998854
Q ss_pred cccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCC-C--CCCcceeeecCCCCCchh-
Q 011600 205 QSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRG-L--FGGAAGLMGLGRDPISLV- 280 (481)
Q Consensus 205 ~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g-~--~~~~~GilGLg~~~~Sl~- 280 (481)
|.|.+.|++| .+.|.+++|+|+|++ ..++++.|||++...+ . ....+||||||+..+++.
T Consensus 70 --------------~~~~i~Yg~G-s~~G~~~~D~v~ig~-~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~ 133 (329)
T 1dpj_A 70 --------------TEFAIQYGTG-SLEGYISQDTLSIGD-LTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDK 133 (329)
T ss_dssp --------------EEEEEEETTE-EEEEEEEEEEEEETT-EEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGG
T ss_pred --------------cEEEEEECCc-eEEEEEEEEEEEECC-eEECCeEEEEEEecCccccccCCcceEEEeCCchhhccC
Confidence 7999999999 589999999999997 6899999999998765 2 246899999999987643
Q ss_pred -----hhhhhh---cCCceEEeccCCC---CCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEee
Q 011600 281 -----SQTATK---YKKLFSYCLPSSA---SSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLS 345 (481)
Q Consensus 281 -----sQ~~~~---~~~~FS~cL~~~~---~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~ 345 (481)
.|+..+ ..++||+||.+.. ...|.|+|||+|+ +++.|+|+.. +.+|.|.|++|+|+++.+.
T Consensus 134 ~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~ 209 (329)
T 1dpj_A 134 VVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRR----KAYWEVKFEGIGLGDEYAE 209 (329)
T ss_dssp CCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSS----BTTBEEEEEEEEETTEEEE
T ss_pred CCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCC----CceEEEEeeeEEECCeEec
Confidence 233332 2689999998653 2479999999885 5899999986 6799999999999998875
Q ss_pred ecccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCeEEEEC
Q 011600 346 IAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVD 425 (481)
Q Consensus 346 ~~~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~l~ 425 (481)
... ..+||||||++++||+++|++|.+++.+. .. .+.||.++|.....+|+|+|+| +|++++|+
T Consensus 210 ~~~-----~~aiiDSGTt~~~lP~~~~~~l~~~~~~~----~~------~~g~~~~~C~~~~~~P~i~f~f-~g~~~~i~ 273 (329)
T 1dpj_A 210 LES-----HGAAIDTGTSLITLPSGLAEMINAEIGAK----KG------WTGQYTLDCNTRDNLPDLIFNF-NGYNFTIG 273 (329)
T ss_dssp CSS-----CEEEECTTCSCEEECHHHHHHHHHHHTCE----EC------TTSSEEECGGGGGGCCCEEEEE-TTEEEEEC
T ss_pred CCC-----ccEEeeCCCCcEECCHHHHHHHHHHhCCc----cC------CCCeEEEECCCCCcCCcEEEEE-CCEEEEEC
Confidence 321 46999999999999999999999998654 11 1236777887777899999999 68999999
Q ss_pred CCCcEEEeCCCceEE-EEEeCC---CCCCceeecHhhhceeEEEEECCCCEEEEEeCC
Q 011600 426 KTGIMYASNISQVCL-AFAGNS---DPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 426 ~~~~l~~~~~~~~Cl-a~~~~~---~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~ 479 (481)
+++|+++.. ..|+ +|.+.+ ...+.||||+.|||++|+|||++++|||||+++
T Consensus 274 ~~~y~~~~~--~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 274 PYDYTLEVS--GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp TTTSEEEET--TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHHhEecCC--CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 999999874 6899 787652 234689999999999999999999999999874
No 7
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=9.3e-56 Score=454.96 Aligned_cols=304 Identities=20% Similarity=0.364 Sum_probs=251.7
Q ss_pred eeeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcc---cccccCCCCCCCCCCCCccccccCCCccc
Q 011600 125 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV---KYCYEQKEPKFDPTVSQSYSNVSCSSTIC 201 (481)
Q Consensus 125 ~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~---~~C~~~~~~~f~ps~SsT~~~~~C~s~~C 201 (481)
..+|+. ++.+.+|+++|+||||||+|.|+|||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 51 ~~~~l~---n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~~--~~y~~~~SsT~~~~~------ 119 (383)
T 2x0b_A 51 SSVILT---NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH--KLFDASDSSSYKHNG------ 119 (383)
T ss_dssp CEEEEE---EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHTS--CCBCGGGCTTCEEEE------
T ss_pred ceEeee---ecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccCC--CCCCCCCCCcEEECC------
Confidence 346776 356789999999999999999999999999999999995 369765 899999999999875
Q ss_pred ccccccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCC-CC--CCcceeeecCCCCCc
Q 011600 202 TSLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRG-LF--GGAAGLMGLGRDPIS 278 (481)
Q Consensus 202 ~~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g-~~--~~~~GilGLg~~~~S 278 (481)
|.|.+.|++|+ +.|++++|+|+|++ ..++ +.|||++.+.+ .| ..++||||||+..++
T Consensus 120 -----------------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~-~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s 179 (383)
T 2x0b_A 120 -----------------TELTLRYSTGT-VSGFLSQDIITVGG-ITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQA 179 (383)
T ss_dssp -----------------EEEEEECSSCE-EEEEEEEEEEEETT-EEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGC
T ss_pred -----------------cEEEEEcCCcc-EEEEEEeeEEEEcC-ceEE-EEEEEEEecCCcccccCCCceEeccCCCccc
Confidence 79999999997 89999999999998 6888 99999999866 22 468999999999876
Q ss_pred h------hhhhhhh---cCCceEEeccCCCCC----CceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEcc
Q 011600 279 L------VSQTATK---YKKLFSYCLPSSASS----TGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGG 341 (481)
Q Consensus 279 l------~sQ~~~~---~~~~FS~cL~~~~~~----~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg 341 (481)
. ..++..+ ..++||+||.+.... .|+|+|||+|+ +++.|+|+.. ..+|.|+|++|+|++
T Consensus 180 ~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~----~~~w~v~l~~i~v~~ 255 (383)
T 2x0b_A 180 IGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQMKGVSVGS 255 (383)
T ss_dssp GGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSS----TTSCEEEECEEEESS
T ss_pred cCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCC----CceEEEEEeEEEeCC
Confidence 3 2333332 268999999986433 79999999985 5899999986 679999999999999
Q ss_pred EEeeecccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCeE
Q 011600 342 QKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVE 421 (481)
Q Consensus 342 ~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~ 421 (481)
+.+..... ..+||||||+++++|+++|++|.+++++.. ..+. |.++|.....+|+|+|+| +|.+
T Consensus 256 ~~~~~~~~----~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-----~~g~------~~v~C~~~~~~P~i~f~~-~g~~ 319 (383)
T 2x0b_A 256 STLLCEDG----CLALVDTGASYISGSTSSIEKLMEALGAKK-----RLFD------YVVKCNEGPTLPDISFHL-GGKE 319 (383)
T ss_dssp CCCBSTTC----EEEEECTTCSSEEECHHHHHHHHHHHTCEE-----CSSC------EEEEGGGTTTCCCEEEEE-TTEE
T ss_pred ceEEcCCC----cEEEEcCCCceEEcCHHHHHHHHHHhCCcc-----cCCc------EEEeccccccCceEEEEE-CCEE
Confidence 87532211 469999999999999999999999997652 2222 334455456799999999 7899
Q ss_pred EEECCCCcEEEeCC--CceEE-EEEeCC---CCCCceeecHhhhceeEEEEECCCCEEEEEeCC
Q 011600 422 VSVDKTGIMYASNI--SQVCL-AFAGNS---DPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 422 ~~l~~~~~l~~~~~--~~~Cl-a~~~~~---~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~ 479 (481)
++|++++|+++... +..|+ +|...+ ...+.||||++|||++|+|||++++|||||++.
T Consensus 320 ~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 320 YTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp EEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 99999999987642 45899 787653 134689999999999999999999999999874
No 8
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.8e-55 Score=443.61 Aligned_cols=301 Identities=20% Similarity=0.368 Sum_probs=250.7
Q ss_pred eeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCc-ccccccCCCCCCCCCCCCccccccCCCcccccc
Q 011600 126 TLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPC-VKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSL 204 (481)
Q Consensus 126 ~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C-~~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~~ 204 (481)
.+|+. +..+.+|+++|.||||||++.|++||||+++||+|.+| ...|..+ +.|||++|+||+...
T Consensus 5 ~~~l~---n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~--------- 70 (323)
T 3cms_A 5 SVPLT---NYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNH--QRFDPRKSSTFQNLG--------- 70 (323)
T ss_dssp EEEEE---EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS--CCBCGGGCTTCEEEE---------
T ss_pred eeeeE---eccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccCC--CCCCCccCCCeEECC---------
Confidence 45665 34578999999999999999999999999999999999 3469755 899999999999875
Q ss_pred cccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCC-CC--CCcceeeecCCCCCch--
Q 011600 205 QSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRG-LF--GGAAGLMGLGRDPISL-- 279 (481)
Q Consensus 205 ~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g-~~--~~~~GilGLg~~~~Sl-- 279 (481)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||++...+ .| ...+||||||++.++.
T Consensus 71 --------------~~~~i~Yg~Gs-~~G~~~~D~v~ig~-~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 134 (323)
T 3cms_A 71 --------------KPLSIHYGTGS-MQGILGYDTVTVSN-IVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEY 134 (323)
T ss_dssp --------------EEEEEEETTEE-EEEEEEEEEEEETT-EEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTT
T ss_pred --------------cEEEEEeCCCC-eEEEEEEEEEEECC-eEEeccEEEEEEecccccccccCCceEEecCcchhhccC
Confidence 79999999997 79999999999998 6899999999998866 23 3689999999987653
Q ss_pred ----hhhhhhh---cCCceEEeccCCCCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEeeecc
Q 011600 280 ----VSQTATK---YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAA 348 (481)
Q Consensus 280 ----~sQ~~~~---~~~~FS~cL~~~~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~ 348 (481)
+.|+..+ ..++||+||.+... .|.|+|||+|+ +++.|+|+.. ..+|.|+|++|+|+++.+.++.
T Consensus 135 ~~~~~~~l~~q~~i~~~~FS~~l~~~~~-~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~ 209 (323)
T 3cms_A 135 SIPVFDNMMNRHLVAQDLFSVYMDRNGQ-ESMLTLGAIDPSYYTGSLHWVPVTV----QQYWQFTVDSVTISGVVVACEG 209 (323)
T ss_dssp CCCHHHHHHHTTCSSSSEEEEECCTTSS-CEEEEESCCCGGGEEEEEEEEECSS----BTTBEEEEEEEEETTEEEESTT
T ss_pred CCCHHHHHHHCCCCCCCEEEEEECCCCC-CEEEEECCCChhhccCceEEEECcc----CCeEEEEEeeEEECCEEeecCC
Confidence 3344433 26899999998644 39999999885 5899999986 5789999999999999876543
Q ss_pred cccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCeEEEECCCC
Q 011600 349 SVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTG 428 (481)
Q Consensus 349 ~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~l~~~~ 428 (481)
. ..+||||||++++||+++|++|.+++.+... ..+ .|.++|.....+|+|+|+| +|++++|++++
T Consensus 210 ~----~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~g------~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~ 274 (323)
T 3cms_A 210 G----CQAILDTGTSKLVGPSSDILNIQQAIGATQN----QYG------EFDIDCDNLSYMPTVVFEI-NGKMYPLTPSA 274 (323)
T ss_dssp C----EEEEECTTCCSEEECHHHHHHHHHHHTCEEE----TTT------EEEECTTCTTTSCCEEEEE-TTEEEEECHHH
T ss_pred C----cEEEEecCCccEeCCHHHHHHHHHHhCCeec----CCC------cEEEECCCCccCceEEEEE-CCEEEEECHHH
Confidence 2 4699999999999999999999999865421 111 2445565556799999999 78999999999
Q ss_pred cEEEeCCCceEE-EEEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCC
Q 011600 429 IMYASNISQVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 429 ~l~~~~~~~~Cl-a~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~ 479 (481)
|+++ .+..|+ +|.+.+ ..+.||||+.|||++|+|||++++|||||+++
T Consensus 275 y~~~--~~~~C~~~i~~~~-~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 275 YTSQ--DQGFCTSGFQSEN-HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp HEEE--ETTEEEESEEEC----CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred hccC--CCCEEEEEEEeCC-CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 9998 367899 587653 34679999999999999999999999999874
No 9
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=2e-55 Score=449.85 Aligned_cols=313 Identities=21% Similarity=0.321 Sum_probs=257.2
Q ss_pred CceeeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcc--cccccCCCCCCCCCCCCccccccCCCcc
Q 011600 123 DDATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV--KYCYEQKEPKFDPTVSQSYSNVSCSSTI 200 (481)
Q Consensus 123 ~~~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~--~~C~~~~~~~f~ps~SsT~~~~~C~s~~ 200 (481)
+...+|+. +..+.+|+++|.||||+|++.|+|||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 6 ~~~~~~l~---~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~--~~y~~~~SsT~~~~~----- 75 (361)
T 1mpp_A 6 SVDTPGLY---DFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGK--RFFDPSSSSTFKETD----- 75 (361)
T ss_dssp CEEEEEEE---ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSS--CCBCGGGCTTCEEEE-----
T ss_pred ccceEEee---cCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCC--CcCCCccCCceEecC-----
Confidence 34557776 345789999999999999999999999999999999995 369754 899999999999875
Q ss_pred cccccccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCC------CC--CCcceeeec
Q 011600 201 CTSLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRG------LF--GGAAGLMGL 272 (481)
Q Consensus 201 C~~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g------~~--~~~~GilGL 272 (481)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||++...+ .| ...+|||||
T Consensus 76 ------------------~~~~i~Yg~Gs-~~G~~~~D~v~~g~-~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGL 135 (361)
T 1mpp_A 76 ------------------YNLNITYGTGG-ANGIYFRDSITVGG-ATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGA 135 (361)
T ss_dssp ------------------EEEEEECSSCE-EEEEEEEEEEEETT-EEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEEC
T ss_pred ------------------CeEEEEECCce-EEEEEEEEEEEECC-EEEeceEEEEEEeccCccccccccccCCCCCEEEe
Confidence 79999999998 79999999999998 6899999999999865 23 368999999
Q ss_pred CCCCCchh------------hhhhhh---cCCceEEeccCCCCCCceEEeCCCCC----CCceEeecccCCCCCccEEEE
Q 011600 273 GRDPISLV------------SQTATK---YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLE 333 (481)
Q Consensus 273 g~~~~Sl~------------sQ~~~~---~~~~FS~cL~~~~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~ 333 (481)
|++.+++. .|+..+ ..++||+||.+. ...|.|+|||+|+ +++.|+|+........+|.|.
T Consensus 136 g~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~ 214 (361)
T 1mpp_A 136 AYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN-DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAP 214 (361)
T ss_dssp SCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS-SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEE
T ss_pred CCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCC-CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEE
Confidence 99876643 344443 268999999985 4579999999874 689999998743223389999
Q ss_pred EeEEEEccEEeeecccccccCCeE-EeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCccccc-Ce
Q 011600 334 MIGISVGGQKLSIAASVFTTAGTI-IDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTL-PQ 411 (481)
Q Consensus 334 l~gIsVgg~~l~~~~~~f~~~~~i-iDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~-P~ 411 (481)
|++|+|+++.+..+.. ..+| |||||++++||+++|++|.+++.+.. +...+ .|.++|.....+ |.
T Consensus 215 l~~i~v~~~~~~~~~~----~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~---~~~~g------~~~~~C~~~~~~~p~ 281 (361)
T 1mpp_A 215 VTGVKIDGSDAVSFDG----AQAFTIDTGTNFFIAPSSFAEKVVKAALPDA---TESQQ------GYTVPCSKYQDSKTT 281 (361)
T ss_dssp EEEEEETTEEEEEEEE----EEEEEEETTCCSEEEEHHHHHHHHHHHCTTC---EEETT------EEEEEHHHHTTCCCE
T ss_pred EeEEEECCeeeccCCC----CEEEEECCCCCceeCCHHHHHHHHHHhCCcc---cCCCC------cEEEECCCcccCCCc
Confidence 9999999988754322 4599 99999999999999999999997652 21111 133344444567 99
Q ss_pred EEEEEc-C-----CeEEEECCCCcEEEeC-CCceEE-EEEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCCCC
Q 011600 412 ISLFFS-G-----GVEVSVDKTGIMYASN-ISQVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 481 (481)
Q Consensus 412 i~f~f~-g-----g~~~~l~~~~~l~~~~-~~~~Cl-a~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~C~ 481 (481)
|+|+|. | |++++|++++|+++.. .+..|+ +|.+. ..+.||||+.|||++|+|||++++|||||+++|+
T Consensus 282 i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~--~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~ 357 (361)
T 1mpp_A 282 FSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPD--GGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASG 357 (361)
T ss_dssp EEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEE--SSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTT
T ss_pred EEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeC--CCCCEEEChHHhccEEEEEECCCCEEEEEEcccC
Confidence 999994 4 8999999999999864 356898 88865 3457999999999999999999999999999995
No 10
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=3e-55 Score=443.96 Aligned_cols=297 Identities=23% Similarity=0.351 Sum_probs=249.0
Q ss_pred eeeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCC--Cccc--------ccccCCCCCCCCCCCCccccc
Q 011600 125 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCE--PCVK--------YCYEQKEPKFDPTVSQSYSNV 194 (481)
Q Consensus 125 ~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~--~C~~--------~C~~~~~~~f~ps~SsT~~~~ 194 (481)
+.+|+... +.+|+++|.||||+|++.|++||||+++||+|. +|.. .|.. ++.|||++|+||+..
T Consensus 3 ~~~~l~~~----~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~--~~~y~~~~SsT~~~~ 76 (334)
T 1j71_A 3 VPTTLINE----GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQ--EGTFDPSSSSSAQNL 76 (334)
T ss_dssp EEEEEEEC----SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGS--SCCBCGGGCTTCEEE
T ss_pred eeEEEecC----CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccC--CCcCCcccCCCcccC
Confidence 56777643 678999999999999999999999999999876 6742 4754 489999999999987
Q ss_pred cCCCcccccccccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCCCCCCcceeeecCC
Q 011600 195 SCSSTICTSLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLFGGAAGLMGLGR 274 (481)
Q Consensus 195 ~C~s~~C~~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g~~~~~~GilGLg~ 274 (481)
. |.|.+.|+||+.+.|.+++|+|+|++ ..++++.|||++... ..+||||||+
T Consensus 77 ~-----------------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~-~~~~~~~fg~~~~~~----~~~GilGLg~ 128 (334)
T 1j71_A 77 N-----------------------QDFSIEYGDLTSSQGSFYKDTVGFGG-ISIKNQQFADVTTTS----VDQGIMGIGF 128 (334)
T ss_dssp E-----------------------EEEEEEBTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEES----SSSCEEECSC
T ss_pred C-----------------------CceEEEECCCCEEEEEEEEEEEEECC-EEEccEEEEEEEecC----CCccEEEEcC
Confidence 5 79999999999889999999999997 689999999999874 4899999999
Q ss_pred CCC--------chhhhhhhhc---CCceEEeccCCCCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEE
Q 011600 275 DPI--------SLVSQTATKY---KKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISV 339 (481)
Q Consensus 275 ~~~--------Sl~sQ~~~~~---~~~FS~cL~~~~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsV 339 (481)
..+ +++.|+..+. .++||+||.+.....|.|+|||+|+ +++.|+|+.. ..+|.|.|++|+|
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v 204 (334)
T 1j71_A 129 TADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTS----SVELRVHLGSINF 204 (334)
T ss_dssp GGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCC----SSSCEEEEEEEEE
T ss_pred CcccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccC----CCeEEEEEeEEEE
Confidence 865 5566766542 6899999987655689999999875 4799999987 4589999999999
Q ss_pred ccEEeeecccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceee-ccCCcccccCeEEEEEcC
Q 011600 340 GGQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYD-FSKYSTVTLPQISLFFSG 418 (481)
Q Consensus 340 gg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~-~~~~~~~~~P~i~f~f~g 418 (481)
+++.+..+ ..+||||||++++||+++|++|.+++.+.+. ...+ .|. ++|. .+|.|+|+|.|
T Consensus 205 ~g~~~~~~------~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~~------~~~~~~C~---~~p~i~f~f~~ 266 (334)
T 1j71_A 205 DGTSVSTN------ADVVLDSGTTITYFSQSTADKFARIVGATWD---SRNE------IYRLPSCD---LSGDAVFNFDQ 266 (334)
T ss_dssp TTEEEEEE------EEEEECTTCSSEEECHHHHHHHHHHHTCEEE---TTTT------EEECSSSC---CCSEEEEEEST
T ss_pred CCEeccCC------ccEEEeCCCCcEecCHHHHHHHHHHcCCccc---CCCc------eEEEEcCC---CCCceEEEEcC
Confidence 99988643 3599999999999999999999999987642 1111 233 3443 28999999977
Q ss_pred CeEEEECCCCcEEEeCCCceEEE-EEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCCCC
Q 011600 419 GVEVSVDKTGIMYASNISQVCLA-FAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 481 (481)
Q Consensus 419 g~~~~l~~~~~l~~~~~~~~Cla-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~C~ 481 (481)
|++++|++++|+++...+..|++ |.+. +.||||+.|||++|+|||++++|||||+++|+
T Consensus 267 g~~~~i~~~~y~~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~ 326 (334)
T 1j71_A 267 GVKITVPLSELILKDSDSSICYFGISRN----DANILGDNFLRRAYIVYDLDDKTISLAQVKYT 326 (334)
T ss_dssp TCEEEEEGGGGEEECSSSSCEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEEEEECCC
T ss_pred CcEEEECHHHheeecCCCCeeEEEEeEC----CCcEEChHhhccEEEEEECCCCEEEEEecCCC
Confidence 89999999999998654456984 5543 25999999999999999999999999999995
No 11
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=9.1e-55 Score=438.55 Aligned_cols=302 Identities=24% Similarity=0.434 Sum_probs=252.7
Q ss_pred eeeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcc-cccccCCCCCCCCCCCCccccccCCCccccc
Q 011600 125 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV-KYCYEQKEPKFDPTVSQSYSNVSCSSTICTS 203 (481)
Q Consensus 125 ~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~-~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~ 203 (481)
+.+|+. +..+.+|+++|.||||||++.|++||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 2 ~~~~l~---n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~-------- 68 (324)
T 1am5_A 2 VTEQMK---NEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNH--NKFKPRQSSTYVETG-------- 68 (324)
T ss_dssp EEEEEE---EETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTS--CCBCGGGCTTCEEEE--------
T ss_pred ceeeee---cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCC--CcCCCccCCCeEeCC--------
Confidence 346666 345789999999999999999999999999999999994 358754 899999999999875
Q ss_pred ccccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCC-CC--CCcceeeecCCCCCch-
Q 011600 204 LQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRG-LF--GGAAGLMGLGRDPISL- 279 (481)
Q Consensus 204 ~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g-~~--~~~~GilGLg~~~~Sl- 279 (481)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||++...+ .| ...+||||||+..++.
T Consensus 69 ---------------~~~~i~Yg~Gs-~~G~~~~D~v~~g~-~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 131 (324)
T 1am5_A 69 ---------------KTVDLTYGTGG-MRGILGQDTVSVGG-GSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAA 131 (324)
T ss_dssp ---------------EEEEEECSSCE-EEEEEEEEEEESSS-SCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGG
T ss_pred ---------------cEEEEEECCCC-eEEEEEECceeECC-cEEcccEEEEEEecccccccCCCCceEEecCCcccccc
Confidence 79999999997 59999999999998 6899999999999866 33 3689999999987764
Q ss_pred -----hhhhhhh---cCCceEEeccCCCCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEeeec
Q 011600 280 -----VSQTATK---YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIA 347 (481)
Q Consensus 280 -----~sQ~~~~---~~~~FS~cL~~~~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~ 347 (481)
+.|+..+ ..++||+||.+.....|.|+|||+|+ +++.|+|+.. ..+|.|.|++|+|+++.+..+
T Consensus 132 ~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~ 207 (324)
T 1am5_A 132 GAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTA----EKYWQVALDGITVNGQTAACE 207 (324)
T ss_dssp GCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEE----ETTEEEEECEEEETTEECCCC
T ss_pred CCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCC----CcEEEEEEeEEEECCceeecc
Confidence 3444443 26899999998755689999999874 6899999987 578999999999999876422
Q ss_pred ccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCeEEEECCC
Q 011600 348 ASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKT 427 (481)
Q Consensus 348 ~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~l~~~ 427 (481)
. ..+||||||++++||+++|++|.+++.+. . ..+ .|.++|.....+|+|+|+| +|++++|+++
T Consensus 208 ~-----~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~----~~g------~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~ 270 (324)
T 1am5_A 208 G-----CQAIVDTGTSKIVAPVSALANIMKDIGAS-E----NQG------EMMGNCASVQSLPDITFTI-NGVKQPLPPS 270 (324)
T ss_dssp C-----EEEEECTTCSSEEECTTTHHHHHHHHTCE-E----CCC------CEECCTTSSSSSCCEEEEE-TTEEEEECHH
T ss_pred C-----ceEEEecCCccEECCHHHHHHHHHHhCCc-c----cCC------cEEEeCCCcccCCcEEEEE-CCEEEEECHH
Confidence 1 35999999999999999999999998765 1 111 1444555556799999999 7899999999
Q ss_pred CcEEEeCCCceEE-EEEeCC---CCCCceeecHhhhceeEEEEECCCCEEEEEeCC
Q 011600 428 GIMYASNISQVCL-AFAGNS---DPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 428 ~~l~~~~~~~~Cl-a~~~~~---~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~ 479 (481)
+|+++. +..|+ +|.+.+ ...+.||||+.|||++|+|||++++|||||+++
T Consensus 271 ~y~~~~--~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 271 AYIEGD--QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp HHEEES--SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred HhcccC--CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 999987 67899 787653 134689999999999999999999999999974
No 12
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=8.7e-55 Score=441.23 Aligned_cols=300 Identities=23% Similarity=0.384 Sum_probs=252.3
Q ss_pred eeeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEe-----CCCcccccccCCCCCCCCCCCCccccccCCCc
Q 011600 125 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQ-----CEPCVKYCYEQKEPKFDPTVSQSYSNVSCSST 199 (481)
Q Consensus 125 ~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~-----c~~C~~~C~~~~~~~f~ps~SsT~~~~~C~s~ 199 (481)
+.+|+... +.+|+++|.||||||++.|++||||+++||+ |.+|. .|..+ +.|||++|+||+...
T Consensus 3 i~~~l~~~----~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~-~C~~~--~~y~~~~SsT~~~~~---- 71 (339)
T 3fv3_A 3 ISLSLINE----GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGV-DCKSS--GTFTPSSSSSYKNLG---- 71 (339)
T ss_dssp EEEEEEEC----SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTC-CTTTT--CCBCGGGCTTCEEEE----
T ss_pred eeeEEEcC----CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCC-CCCCC--CcCCCccCcceeeCC----
Confidence 56787754 5789999999999999999999999999998 66553 48754 899999999999975
Q ss_pred ccccccccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCCCCCCcceeeecCCCCCc-
Q 011600 200 ICTSLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLFGGAAGLMGLGRDPIS- 278 (481)
Q Consensus 200 ~C~~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g~~~~~~GilGLg~~~~S- 278 (481)
|.|.+.|+||+.+.|.+++|+|+|++ ..++++.|||++...+ .+||||||+..++
T Consensus 72 -------------------~~~~i~Yg~gs~~~G~~~~D~v~~g~-~~v~~~~fg~~~~~~~----~~GilGLg~~~~~~ 127 (339)
T 3fv3_A 72 -------------------AAFTIRYGDGSTSQGTWGKDTVTING-VSITGQQIADVTQTSV----DQGILGIGYTSNEA 127 (339)
T ss_dssp -------------------EEEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEESS----SSCEEECSCGGGCC
T ss_pred -------------------ceEEEEECCCceEEEEEEEEEEEECC-EEECceEEEEEEecCC----CceeEEecCccccc
Confidence 79999999998899999999999998 6899999999999875 6999999998754
Q ss_pred ---------------hhhhhhhhc---CCceEEeccCCCCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeE
Q 011600 279 ---------------LVSQTATKY---KKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIG 336 (481)
Q Consensus 279 ---------------l~sQ~~~~~---~~~FS~cL~~~~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~g 336 (481)
++.|+..+. .++||+||.+.....|.|+|||+|+ +++.|+|+.. ..+|.|+|++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~ 203 (339)
T 3fv3_A 128 VYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTS----SQALTISLAS 203 (339)
T ss_dssp CBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCC----SSSCEEEEEE
T ss_pred cccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEeccc----CccEEEEEEE
Confidence 566666542 5899999998765689999999764 6899999987 4689999999
Q ss_pred EEEccEEeeecccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEE
Q 011600 337 ISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFF 416 (481)
Q Consensus 337 IsVgg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f 416 (481)
|+|+++.+... ..+||||||++++||+++|++|.+++.+.........+ -|.++|.. ..+|.|+|+|
T Consensus 204 i~v~g~~~~~~------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~------~~~~~C~~-~~~p~i~f~f 270 (339)
T 3fv3_A 204 VNLKGSSFSFG------DGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQY------LYFIDCNT-DTSGTTVFNF 270 (339)
T ss_dssp EEESSCEEEEE------EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTEE------EEEECTTC-CCCSEEEEEE
T ss_pred EEECCEeecCC------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccCc------eEEEecCC-CCCCcEEEEE
Confidence 99999988654 35999999999999999999999999876321101111 24445553 4689999999
Q ss_pred cCCeEEEECCCCcEEEeCCCceEE-EEEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCCCC
Q 011600 417 SGGVEVSVDKTGIMYASNISQVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 481 (481)
Q Consensus 417 ~gg~~~~l~~~~~l~~~~~~~~Cl-a~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~C~ 481 (481)
.+|++++|++++|+++.. +..|+ +|.+ .+.+|||+.|||++|+|||++++|||||+++|+
T Consensus 271 ~~g~~~~v~~~~~~~~~~-~~~C~~~i~~----~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~ 331 (339)
T 3fv3_A 271 GNGAKITVPNTEYVYQNG-DGTCLWGIQP----SDDTILGDNFLRHAYLLYNLDANTISIAQVKYT 331 (339)
T ss_dssp TTSCEEEEEGGGGEEECS-SSCEEESEEE----CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCC
T ss_pred CCCCEEEECHHHheeeCC-CCeEEEEEEe----CCcEEeChHHHhCEEEEEECCCCEEEEEecCCC
Confidence 768999999999998864 46795 7776 246999999999999999999999999999995
No 13
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1e-54 Score=441.44 Aligned_cols=300 Identities=21% Similarity=0.359 Sum_probs=249.4
Q ss_pred eeeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCC--Ccc--------cccccCCCCCCCCCCCCccccc
Q 011600 125 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCE--PCV--------KYCYEQKEPKFDPTVSQSYSNV 194 (481)
Q Consensus 125 ~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~--~C~--------~~C~~~~~~~f~ps~SsT~~~~ 194 (481)
+.+|+.. ++.+|+++|.||||+|++.|++||||+++||+|. +|. ..|.. ++.|||++|+||+..
T Consensus 3 v~~~l~~----~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~--~~~y~~~~SsT~~~~ 76 (342)
T 2qzx_A 3 VAVTLHN----EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKS--AGSYSPASSRTSQNL 76 (342)
T ss_dssp EEEEEEE----CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGT--TCCBCGGGCTTCEEE
T ss_pred eeEEEec----CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccC--CCcCCcccCCCcccC
Confidence 5567764 3678999999999999999999999999999865 674 24754 489999999999987
Q ss_pred cCCCcccccccccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCCCCCCcceeeecCC
Q 011600 195 SCSSTICTSLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLFGGAAGLMGLGR 274 (481)
Q Consensus 195 ~C~s~~C~~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g~~~~~~GilGLg~ 274 (481)
. |.|.+.|+||+.+.|.+++|+|+|++ ..++++.|||++... ..+||||||+
T Consensus 77 ~-----------------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~-~~v~~~~fg~~~~~~----~~~GilGLg~ 128 (342)
T 2qzx_A 77 N-----------------------TRFDIKYGDGSYAKGKLYKDTVGIGG-VSVRDQLFANVWSTS----ARKGILGIGF 128 (342)
T ss_dssp E-----------------------EEEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEEC----SSSCEEECSC
T ss_pred C-----------------------CcEEEEeCCCCeEEEEEEEEEEEECC-EEecceEEEEEEecC----CCcCEEEEcc
Confidence 5 79999999999889999999999997 689999999999875 4899999999
Q ss_pred CCC--------chhhhhhhhc---CCceEEeccCCCCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEE
Q 011600 275 DPI--------SLVSQTATKY---KKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISV 339 (481)
Q Consensus 275 ~~~--------Sl~sQ~~~~~---~~~FS~cL~~~~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsV 339 (481)
..+ +++.|+..+. +++||+||.+.....|.|+|||+|+ +++.|+|+.. ..+|.|.|++|+|
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v 204 (342)
T 2qzx_A 129 QSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITS----EKKLTVGLRSVNV 204 (342)
T ss_dssp GGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCC----SSSCEEEEEEEEE
T ss_pred ccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccC----CceEEEEEeEEEE
Confidence 865 5566766542 6899999987655689999999764 6899999987 4589999999999
Q ss_pred ccEEeeecccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCC
Q 011600 340 GGQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGG 419 (481)
Q Consensus 340 gg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg 419 (481)
+++.+..+ ..+||||||++++||+++|++|.+++.+.+.. ....+ ..|.++|.. +|.|+|+|.||
T Consensus 205 ~g~~~~~~------~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~-~~~~~-----~~~~~~C~~---~p~i~f~f~~g 269 (342)
T 2qzx_A 205 RGRNVDAN------TNVLLDSGTTISYFTRSIVRNILYAIGAQMKF-DSAGN-----KVYVADCKT---SGTIDFQFGNN 269 (342)
T ss_dssp TTEEEEEE------EEEEECTTCSSEEECHHHHHHHHHHHTCEEEE-CTTSC-----EEEEECTTC---CCEEEEEETTT
T ss_pred CCEecCCC------cCEEEeCCCCCEEcCHHHHHHHHHHhCCeeee-ccCCC-----cEEEEECCC---CCcEEEEECCC
Confidence 99988643 35999999999999999999999999876431 11111 134555542 89999999778
Q ss_pred eEEEECCCCcEEEe-----CCCceEEE-EEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCCCC
Q 011600 420 VEVSVDKTGIMYAS-----NISQVCLA-FAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 481 (481)
Q Consensus 420 ~~~~l~~~~~l~~~-----~~~~~Cla-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~C~ 481 (481)
++++|++++|+++. +....|++ +.+. +.+|||+.|||++|+|||++++|||||+++|+
T Consensus 270 ~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~ 333 (342)
T 2qzx_A 270 LKISVPVSEFLFQTYYTSGKPFPKCEVRIRES----EDNILGDNFLRSAYVVYNLDDKKISMAPVKYT 333 (342)
T ss_dssp EEEEEEGGGGEECCBCTTSCBCSSEEESEEEC----SSCEECHHHHTTEEEEEETTTTEEEEEEBCCC
T ss_pred cEEEEcHHHhcccccccCCCCCCccEEEEecC----CCcEeChHhhhcEEEEEECCCCEEEEEeeCCC
Confidence 99999999999874 22467995 5443 25999999999999999999999999999995
No 14
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1e-54 Score=439.10 Aligned_cols=298 Identities=26% Similarity=0.364 Sum_probs=245.0
Q ss_pred cCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcccccccCCCCCCCCCCCCccccccCCCcccccccccCCCCCCC
Q 011600 135 VGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPAC 214 (481)
Q Consensus 135 ~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~~~~~~~~~~~C 214 (481)
..+.+|+++|.||||+|++.|++||||+++||+|.+|.. |..+.++.|||++|+||+.++|
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~-~~~~~~~~y~~~~SsT~~~~~~------------------ 72 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPK-SSATGHAIYTPSKSSTSKKVSG------------------ 72 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCH-HHHTTSCCBCGGGCTTCEECTT------------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCc-cccCCCCcCCcccCcCceEcCC------------------
Confidence 357889999999999999999999999999999999953 7666678999999999998742
Q ss_pred CCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCCCC---CCcceeeecCCCCCchh---------hh
Q 011600 215 ASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLF---GGAAGLMGLGRDPISLV---------SQ 282 (481)
Q Consensus 215 ~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g~~---~~~~GilGLg~~~~Sl~---------sQ 282 (481)
|.|.+.|+||+.+.|.+++|+|+|++ ..++++.|||++...+.| ...+||||||+..++++ .|
T Consensus 73 ----~~~~i~Yg~Gs~~~G~~~~D~v~ig~-~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 147 (329)
T 3c9x_A 73 ----ASWSISYGDGSSSSGDVYTDKVTIGG-FSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSN 147 (329)
T ss_dssp ----CBEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred ----CeEEEEeCCCCcEEEEEEEEEEEECC-EEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHH
Confidence 79999999999889999999999997 689999999999876633 46899999999876643 34
Q ss_pred hhhhc-CCceEEeccCCCCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEeeecccccccCCeE
Q 011600 283 TATKY-KKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTI 357 (481)
Q Consensus 283 ~~~~~-~~~FS~cL~~~~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~i 357 (481)
+..+. .++||+||.+. ..|.|+|||+|+ +++.|+|+.. ...+|.|+|++|+|+++.+. ... ..+|
T Consensus 148 l~~~i~~~~FS~~l~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~~v~l~~i~v~~~~~~--~~~---~~ai 217 (329)
T 3c9x_A 148 AASSLAEPLFTADLRHG--QNGSYNFGYIDTSVAKGPVAYTPVDN---SQGFWEFTASGYSVGGGKLN--RNS---IDGI 217 (329)
T ss_dssp HHTTSSSSEEEEECCSS--SCEEEEESSCCGGGCSSCEEEEECBC---TTSSCEEEECCEEETTCCCC--SCC---EEEE
T ss_pred HHHhcCCCEEEEEecCC--CCcEEEEeCcChhhcccceEEEEccC---CCceEEEEEeeEEECCEecc--CCC---ceEE
Confidence 43332 68999999863 479999999874 6999999975 25789999999999998764 222 3599
Q ss_pred EeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCeEEEECCCCcEEEeC--C
Q 011600 358 IDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTGIMYASN--I 435 (481)
Q Consensus 358 iDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~l~~~~~l~~~~--~ 435 (481)
|||||++++||+++|++|.+++.... +....+. |.++|. ..+|+|+|+| +|+++.|++++|++... .
T Consensus 218 iDSGTt~~~lp~~~~~~i~~~i~~a~--~~~~~~~------~~~~C~--~~~P~i~f~f-~g~~~~ip~~~~~~~~~~~~ 286 (329)
T 3c9x_A 218 ADTGTTLLLLDDNVVDAYYANVQSAQ--YDNQQEG------VVFDCD--EDLPSFSFGV-GSSTITIPGDLLNLTPLEEG 286 (329)
T ss_dssp ECTTCCSEEECHHHHHHHHTTCTTCE--EETTTTE------EEEETT--CCCCCEEEEE-TTEEEEECGGGGEEEESSTT
T ss_pred EECCCCcEeCCHHHHHHHHHhCCCcE--EcCCCCE------EEEECC--CCCCcEEEEE-CCEEEEECHHHeeeeccCCC
Confidence 99999999999999999998874432 1111111 334444 3689999999 68999999999998753 2
Q ss_pred CceEEE-EEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeC
Q 011600 436 SQVCLA-FAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAG 478 (481)
Q Consensus 436 ~~~Cla-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~ 478 (481)
...|++ |.+.+ ..+.||||+.|||++|+|||++++|||||+.
T Consensus 287 ~~~C~~~i~~~~-~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 287 SSTCFGGLQSSS-GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp CSEEEESEEECT-TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred CCeEEEEEEcCC-CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 478995 66553 3468999999999999999999999999974
No 15
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.8e-54 Score=437.34 Aligned_cols=296 Identities=22% Similarity=0.336 Sum_probs=243.1
Q ss_pred CceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcccccccCCCCCCCCCCCCccccccCCCcccccccccCCCCCCCC
Q 011600 136 GAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPACA 215 (481)
Q Consensus 136 ~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~~~~~~~~~~~C~ 215 (481)
.+.+|+++|.||||+|++.|++||||+++||+|.+|.. |.. .++.|||++|+||+.++|
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~-~~~-~~~~y~~~~SsT~~~~~~------------------- 71 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTA-SEV-XQTIYTPSKSTTAKLLSG------------------- 71 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCG-GGC--CCCBCGGGCTTCEEEEE-------------------
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCc-ccc-ccCccCCccCccceecCC-------------------
Confidence 46889999999999999999999999999999999953 654 568999999999998752
Q ss_pred CCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCCCC---CCcceeeecCCCCCch---------hhhh
Q 011600 216 SSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLF---GGAAGLMGLGRDPISL---------VSQT 283 (481)
Q Consensus 216 ~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g~~---~~~~GilGLg~~~~Sl---------~sQ~ 283 (481)
|.|.+.|++|+.+.|.+++|+|+|++ ..++++.|||++...+.+ ...+||||||+..+++ ..|+
T Consensus 72 ---~~~~i~Yg~Gs~~~G~~~~D~v~~g~-~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 147 (329)
T 1oew_A 72 ---ATWSISYGDGSSSSGDVYTDTVSVGG-LTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNA 147 (329)
T ss_dssp ---EEEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred ---CeEEEEeCCCCcEEEEEEEEEEEECC-EEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHH
Confidence 79999999999889999999999998 689999999999876633 4689999999987664 3344
Q ss_pred hhhc-CCceEEeccCCCCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEeeecccccccCCeEE
Q 011600 284 ATKY-KKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTII 358 (481)
Q Consensus 284 ~~~~-~~~FS~cL~~~~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~ii 358 (481)
..+. .++||+||.+. ..|.|+|||+|+ +++.|+|+.. ...+|.|+|++|+|+++.+.. .. ..+||
T Consensus 148 ~~~i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~~v~l~~i~v~~~~~~~--~~---~~aii 217 (329)
T 1oew_A 148 KASLDSPVFTADLGYH--APGTYNFGFIDTTAYTGSITYTAVST---KQGFWEWTSTGYAVGSGTFKS--TS---IDGIA 217 (329)
T ss_dssp TTTSSSSEEEEECCSS--SCEEEEESCCCTTSSSSCCEEEECBC---TTSSCEEEEEEEEETTSCCEE--EE---EEEEE
T ss_pred HHhccCcEEEEEccCC--CCeEEEEeccChHhcccceEEEEccC---CCceEEEEEeeEEECCeeccC--CC---ceEEE
Confidence 4333 68999999863 479999999874 6899999985 257899999999999987642 22 35999
Q ss_pred eccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCeEEEECCCCcEEEeC--CC
Q 011600 359 DSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTGIMYASN--IS 436 (481)
Q Consensus 359 DSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~l~~~~~l~~~~--~~ 436 (481)
||||++++||+++|++|.+++.... +....+. |.++|. ..+|+|+|+| ||++++|++++|++... ..
T Consensus 218 DSGTt~~~lP~~~~~~l~~~i~~a~--~~~~~g~------~~~~C~--~~~P~i~f~f-gg~~~~ip~~~~~~~~~~~~~ 286 (329)
T 1oew_A 218 DTGTTLLYLPATVVSAYWAQVSGAK--SSSSVGG------YVFPCS--ATLPSFTFGV-GSARIVIPGDYIDFGPISTGS 286 (329)
T ss_dssp CTTCCSEEECHHHHHHHHTTSTTCE--EETTTTE------EEEETT--CCCCCEEEEE-TTEEEEECHHHHEEEESSTTC
T ss_pred eCCCCCEECCHHHHHHHHHhCCCcE--EcCCCCE------EEEECC--CCCCcEEEEE-CCEEEEECHHHeeeeecCCCC
Confidence 9999999999999999998874332 1111111 334444 3689999999 89999999999998752 24
Q ss_pred ceEEE-EEeCCCCCCceeecHhhhceeEEEEEC-CCCEEEEEeC
Q 011600 437 QVCLA-FAGNSDPTDVSIFGNTQQHTLEVVYDV-AGGKVGFAAG 478 (481)
Q Consensus 437 ~~Cla-~~~~~~~~~~~IlG~~fl~~~~vvfD~-~~~rIGFa~~ 478 (481)
..|++ |.+.+ ..+.||||+.|||++|+|||+ +++|||||+.
T Consensus 287 ~~C~~~i~~~~-~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 287 SSCFGGIQSSA-GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp SEEEESEEEST-TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred CeEEEEEEeCC-CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 78995 66553 346899999999999999999 9999999984
No 16
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=3.2e-54 Score=434.87 Aligned_cols=295 Identities=24% Similarity=0.394 Sum_probs=244.1
Q ss_pred cCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcccccccCCCCCCCCCCCCccccccCCCcccccccccCCCCCCC
Q 011600 135 VGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPAC 214 (481)
Q Consensus 135 ~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~~~~~~~~~~~C 214 (481)
..+.+|+++|.||||+|++.|++||||+++||+|.+|.. | .+.++.|||++|+||+...
T Consensus 12 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~-c-~~~~~~y~~~~SsT~~~~~------------------- 70 (325)
T 2apr_A 12 GNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTN-C-GSGQTKYDPNQSSTYQADG------------------- 70 (325)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSS-C-CTTSCCBCGGGCTTCEEEE-------------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCch-H-hcCCCCCCcccCCCeeeCC-------------------
Confidence 457899999999999999999999999999999999964 7 5667899999999998853
Q ss_pred CCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCCCCC--CcceeeecCCCCCc-------hhhhhhh
Q 011600 215 ASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLFG--GAAGLMGLGRDPIS-------LVSQTAT 285 (481)
Q Consensus 215 ~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g~~~--~~~GilGLg~~~~S-------l~sQ~~~ 285 (481)
|.|.+.|+||+.+.|.+++|+|+|++ ..++++.|||++...+.|. ..+||||||+..++ ++.|+..
T Consensus 71 ----~~~~i~Yg~Gs~~~G~~~~D~v~~g~-~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~ 145 (325)
T 2apr_A 71 ----RTWSISYGDGSSASGILAKDNVNLGG-LLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLIS 145 (325)
T ss_dssp ----EEEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHH
T ss_pred ----CEEEEEECCCCCEEEEEEEEEEEECC-EEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHHh
Confidence 79999999999899999999999998 6899999999998765442 48999999998765 4455554
Q ss_pred h---cCCceEEeccCC-CCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEeeecccccccCCeE
Q 011600 286 K---YKKLFSYCLPSS-ASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTI 357 (481)
Q Consensus 286 ~---~~~~FS~cL~~~-~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~i 357 (481)
+ ..++||+||.+. ....|.|+|||+|+ +++.|+|+.. ...+|.|.|++|+|++ ++. ... ..+|
T Consensus 146 qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~~v~l~~i~vg~-~~~--~~~---~~~i 216 (325)
T 2apr_A 146 QGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDN---SRGWWGITVDRATVGT-STV--ASS---FDGI 216 (325)
T ss_dssp TTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBC---TTSSCEEEECEEEETT-EEE--ECC---EEEE
T ss_pred cCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccC---CCCEEEEEEeEEEECC-Eec--CCC---ceEE
Confidence 4 268999999653 23579999999874 6899999975 2578999999999999 332 222 3599
Q ss_pred EeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCeEEEECCCCcEEEeCCCc
Q 011600 358 IDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTGIMYASNISQ 437 (481)
Q Consensus 358 iDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~l~~~~~l~~~~~~~ 437 (481)
|||||++++||+++|++|.+++.+.+... +. |.++|.. ..+|+|+|+|. |.+++||+++|+++.. +.
T Consensus 217 iDSGTs~~~lP~~~~~~~~~~~~~~~~~~----g~------~~~~C~~-~~~p~i~f~f~-g~~~~ip~~~~~~~~~-~~ 283 (325)
T 2apr_A 217 LDTGTTLLILPNNIAASVARAYGASDNGD----GT------YTISCDT-SAFKPLVFSIN-GASFQVSPDSLVFEEF-QG 283 (325)
T ss_dssp ECTTCSSEEEEHHHHHHHHHHHTCEECSS----SC------EEECSCG-GGCCCEEEEET-TEEEEECGGGGEEEEE-TT
T ss_pred EecCCccEECCHHHHHHHHHHHhcccCCC----Ce------EEEECCC-CCCCcEEEEEC-CEEEEECHHHEEEcCC-CC
Confidence 99999999999999999999998764321 11 3444543 35899999994 5699999999998754 67
Q ss_pred eEEE-EEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCC
Q 011600 438 VCLA-FAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 438 ~Cla-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~ 479 (481)
.|++ |...+ .+.||||+.|||++|+|||++++|||||++.
T Consensus 284 ~C~~~i~~~~--~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 284 QCIAGFGYGN--WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp EEEESEEEES--SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred eEEEEEEcCC--CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 8995 55442 4579999999999999999999999999874
No 17
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.4e-54 Score=436.38 Aligned_cols=296 Identities=22% Similarity=0.426 Sum_probs=249.5
Q ss_pred ccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcc-cccccCCCCCCCCCCCCccccccCCCcccccccccCCCCC
Q 011600 134 VVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV-KYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSP 212 (481)
Q Consensus 134 ~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~-~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~~~~~~~~~~ 212 (481)
++.+.+|+++|.||||||++.|++||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 7 n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~----------------- 67 (320)
T 4aa9_A 7 SYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNH--HRFDPRKSSTFRNLG----------------- 67 (320)
T ss_dssp -CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS--CCBCGGGCTTCEEEE-----------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCC--CCCCCCCCcCeEcCC-----------------
Confidence 456789999999999999999999999999999999994 257654 899999999999875
Q ss_pred CCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCC-CC--CCcceeeecCCCCCc------hhhhh
Q 011600 213 ACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRG-LF--GGAAGLMGLGRDPIS------LVSQT 283 (481)
Q Consensus 213 ~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g-~~--~~~~GilGLg~~~~S------l~sQ~ 283 (481)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||++...+ .| ...+||||||+..++ ++.++
T Consensus 68 ------~~~~i~Yg~gs-~~G~~~~D~v~ig~-~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l 139 (320)
T 4aa9_A 68 ------KPLSIHYGTGS-MEGFLGYDTVTVSN-IVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNM 139 (320)
T ss_dssp ------EEEEEEETTEE-EEEEEEEEEEEETT-EEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHH
T ss_pred ------cEEEEEECCcE-EEEEEEEEEEEECC-EeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHH
Confidence 79999999998 79999999999998 6899999999998876 23 357999999998655 44455
Q ss_pred hhh---cCCceEEeccCCCCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEeeecccccccCCe
Q 011600 284 ATK---YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGT 356 (481)
Q Consensus 284 ~~~---~~~~FS~cL~~~~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~ 356 (481)
..+ ..++||+||.+. ...|.|+|||+|+ +++.|+|+.. ..+|.|+|++|+|+++.+..+.. ..+
T Consensus 140 ~~~g~i~~~~Fs~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~~~~~~~----~~~ 210 (320)
T 4aa9_A 140 MDRHLVARDLFSVYMDRN-GQGSMLTLGAIDPSYYTGSLHWVPVTL----QQYWQFTVDSVTINGVAVACVGG----CQA 210 (320)
T ss_dssp HHTTCSSSSEEEEECCSS-SSCCEEEETCCCGGGEEEEEEEEECSS----BTTBEEEECEEEETTEEEESTTC----EEE
T ss_pred HhCCCCCCceEEEEeCCC-CCCeEEEEcccCHHHccCceEEEEccc----CCceEEEEeEEEECCEEeccCCC----cEE
Confidence 443 268899999985 4579999999885 5899999986 67999999999999998875432 469
Q ss_pred EEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCeEEEECCCCcEEEeCCC
Q 011600 357 IIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTGIMYASNIS 436 (481)
Q Consensus 357 iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~l~~~~~l~~~~~~ 436 (481)
||||||++++||+++|++|.+++++... .. ..|.++|.....+|+|+|+| +|++++|++++|+.+. +
T Consensus 211 iiDsGtt~~~lP~~~~~~i~~~~~~~~~----~~------g~~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~y~~~~--~ 277 (320)
T 4aa9_A 211 ILDTGTSVLFGPSSDILKIQMAIGATEN----RY------GEFDVNCGNLRSMPTVVFEI-NGRDYPLSPSAYTSKD--Q 277 (320)
T ss_dssp EECTTCSSEEEEHHHHHHHHHHTTCEEC----TT------SCEEECGGGGGGCCCEEEEE-TTEEEEECHHHHEEEE--T
T ss_pred EEECCCCcEECCHHHHHHHHHHhCCccc----CC------CcEEEeCCCCCcCceEEEEE-CCEEEEECHHHhccCC--C
Confidence 9999999999999999999999865421 11 13566666667899999999 7899999999999774 5
Q ss_pred ceEE-EEEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCC
Q 011600 437 QVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 437 ~~Cl-a~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~ 479 (481)
..|+ +|... ...+.+|||+.|||++|+|||++++|||||+++
T Consensus 278 ~~C~~~i~~~-~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 278 GFCTSGFQGD-NNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp TEEEESEEEE-TTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CeEEEEEEcC-CCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 7899 57764 234579999999999999999999999999974
No 18
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=2.1e-54 Score=436.84 Aligned_cols=302 Identities=26% Similarity=0.472 Sum_probs=249.6
Q ss_pred eccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcc-cccccCCCCCCCCCCCCccccccCCCccccccc
Q 011600 127 LPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV-KYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQ 205 (481)
Q Consensus 127 ~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~-~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~~~ 205 (481)
+|+. ..+.+|+++|.||||+|++.|++||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 5 ~~l~----~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~---------- 68 (329)
T 1htr_B 5 EPMA----YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSH--SRFNPSESSTYSTNG---------- 68 (329)
T ss_dssp CGGG----GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS--CCBCGGGCTTCEEEE----------
T ss_pred eeeE----EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCC--CcCCCccCCCeEECC----------
Confidence 5665 35789999999999999999999999999999999994 258754 899999999999875
Q ss_pred ccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCC-CC--CCcceeeecCCCCCch---
Q 011600 206 SATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRG-LF--GGAAGLMGLGRDPISL--- 279 (481)
Q Consensus 206 ~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g-~~--~~~~GilGLg~~~~Sl--- 279 (481)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||++...+ .| ...+||||||+..++.
T Consensus 69 -------------~~~~i~Yg~gs-~~G~~~~D~v~~g~-~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 133 (329)
T 1htr_B 69 -------------QTFSLQYGSGS-LTGFFGYDTLTVQS-IQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEA 133 (329)
T ss_dssp -------------EEEEEEETTEE-EEEEEEEEEEEETT-EEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTC
T ss_pred -------------cEEEEEeCCCC-eEEEEEeeeEEEcc-eEECceEEEEEEEccccccccCCCceEEecCCCcccccCC
Confidence 79999999997 59999999999997 6899999999998866 23 3689999999998764
Q ss_pred ---hhhhhhh---cCCceEEeccCCCCC-CceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEeeecc
Q 011600 280 ---VSQTATK---YKKLFSYCLPSSASS-TGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAA 348 (481)
Q Consensus 280 ---~sQ~~~~---~~~~FS~cL~~~~~~-~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~ 348 (481)
+.|+..+ ..++||+||.+.... .|.|+|||+|+ +++.|+|+.. ..+|.|+|++|+|+++.+....
T Consensus 134 ~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~ 209 (329)
T 1htr_B 134 TTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQ----ELYWQIGIEEFLIGGQASGWCS 209 (329)
T ss_dssp CSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCS----SSSCEEEECEEEETTEECCTTT
T ss_pred CCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCC----CceEEEEEeEEEECCceeeecC
Confidence 3444443 268999999986544 79999999885 5899999986 5799999999999998764111
Q ss_pred cccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCeEEEECCCC
Q 011600 349 SVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTG 428 (481)
Q Consensus 349 ~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~l~~~~ 428 (481)
.. ..+||||||++++||+++|++|.+++.+... ..+. |.++|.....+|+|+|+| +|++++|++++
T Consensus 210 ~~---~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~----~~g~------~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~ 275 (329)
T 1htr_B 210 EG---CQAIVDTGTSLLTVPQQYMSALLQATGAQED----EYGQ------FLVNCNSIQNLPSLTFII-NGVEFPLPPSS 275 (329)
T ss_dssp TC---EEEEECTTCCSEEEEGGGHHHHHHHHTCEEC----TTSC------EEECGGGGGGSCCEEEEE-TTEEEEECHHH
T ss_pred CC---ceEEEecCCccEECCHHHHHHHHHHhCCeec----CCCe------EEEeCCCcccCCcEEEEE-CCEEEEECHHH
Confidence 11 4699999999999999999999999876521 1111 334444445799999999 78999999999
Q ss_pred cEEEeCCCceEE-EEEeCC---CCCC-ceeecHhhhceeEEEEECCCCEEEEEeCC
Q 011600 429 IMYASNISQVCL-AFAGNS---DPTD-VSIFGNTQQHTLEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 429 ~l~~~~~~~~Cl-a~~~~~---~~~~-~~IlG~~fl~~~~vvfD~~~~rIGFa~~~ 479 (481)
|+++.. ..|+ +|.+.+ ...+ .||||+.|||++|+|||++++|||||+++
T Consensus 276 y~~~~~--g~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 276 YILSNN--GYCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp HEEECS--SCEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred hcccCC--CEEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 999875 3899 687653 1234 79999999999999999999999999874
No 19
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=4e-54 Score=436.65 Aligned_cols=306 Identities=21% Similarity=0.370 Sum_probs=254.4
Q ss_pred CceeeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcc---cccccCCCCCCCCCCCCccccccCCCc
Q 011600 123 DDATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV---KYCYEQKEPKFDPTVSQSYSNVSCSST 199 (481)
Q Consensus 123 ~~~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~---~~C~~~~~~~f~ps~SsT~~~~~C~s~ 199 (481)
+.+.+|+. +..+.+|+++|.||||||++.|++||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 6 ~~~~~~l~---n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~--~~y~~~~SsT~~~~~---- 76 (341)
T 3k1w_A 6 TTSSVILT---NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH--KLFDASDSSSYKHNG---- 76 (341)
T ss_dssp BCEEEEEE---EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTS--CCBCGGGCTTCEEEE----
T ss_pred CCccccce---EccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCC--CCCCCCcCcCeeECC----
Confidence 34567876 345789999999999999999999999999999999995 258654 899999999999864
Q ss_pred ccccccccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCCC-C--CCcceeeecCCCC
Q 011600 200 ICTSLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGL-F--GGAAGLMGLGRDP 276 (481)
Q Consensus 200 ~C~~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g~-~--~~~~GilGLg~~~ 276 (481)
|.|.+.|++|+ +.|.+++|+|+|++ ..+ ++.|||++...+. | ...+||||||+..
T Consensus 77 -------------------~~~~i~Yg~gs-~~G~~~~D~v~ig~-~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~ 134 (341)
T 3k1w_A 77 -------------------TELTLRYSTGT-VSGFLSQDIITVGG-ITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIE 134 (341)
T ss_dssp -------------------EEEEEEETTEE-EEEEEEEEEEEETT-EEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGG
T ss_pred -------------------CEEEEEECCcE-EEEEEEEEEEEECC-cee-eEEEEEEEEccccccccCCcceEEECCchh
Confidence 79999999998 89999999999998 678 9999999988752 2 3579999999988
Q ss_pred Cc------hhhhhhhh---cCCceEEeccCCC----CCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEE
Q 011600 277 IS------LVSQTATK---YKKLFSYCLPSSA----SSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISV 339 (481)
Q Consensus 277 ~S------l~sQ~~~~---~~~~FS~cL~~~~----~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsV 339 (481)
++ ++.++..+ ..++||+||.+.. ...|.|+|||+|+ +++.|+|+.. ..+|.|.|++|+|
T Consensus 135 ~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v 210 (341)
T 3k1w_A 135 QAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQMKGVSV 210 (341)
T ss_dssp GCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSS----TTSCEEEECCEEE
T ss_pred hcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCC----CCEEEEEEeEEEE
Confidence 76 34455443 2689999999864 2479999999885 5899999986 6799999999999
Q ss_pred ccEEeeecccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCC
Q 011600 340 GGQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGG 419 (481)
Q Consensus 340 gg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg 419 (481)
+++.+..+.. ..+||||||++++||+++|++|.+++.+.. . ..+ |.++|.....+|+|+|+| +|
T Consensus 211 ~~~~~~~~~~----~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~---~-~~g-------~~~~C~~~~~~p~i~f~f-~g 274 (341)
T 3k1w_A 211 GSSTLLCEDG----CLALVDTGASYISGSTSSIEKLMEALGAKK---R-LFD-------YVVKCNEGPTLPDISFHL-GG 274 (341)
T ss_dssp TTEEEECTTC----EEEEECTTCSSEEECHHHHHHHHHHHTCEE---C-SSC-------EEEEGGGGGGCCCEEEEE-TT
T ss_pred CCEEeecCCC----CEEEEECCCChhcCCHHHHHHHHHHcCCee---c-CCC-------eEEeCCCCCcCCcEEEEE-CC
Confidence 9997654432 469999999999999999999999997652 1 111 556666666899999999 78
Q ss_pred eEEEECCCCcEEEeC--CCceEE-EEEeCC---CCCCceeecHhhhceeEEEEECCCCEEEEEeCC
Q 011600 420 VEVSVDKTGIMYASN--ISQVCL-AFAGNS---DPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 420 ~~~~l~~~~~l~~~~--~~~~Cl-a~~~~~---~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~ 479 (481)
++++|++++|+++.. .+..|+ +|...+ ...+.||||+.|||++|+|||++++|||||+++
T Consensus 275 ~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 275 KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp EEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 999999999998753 357899 677642 234679999999999999999999999999974
No 20
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.2e-53 Score=438.57 Aligned_cols=300 Identities=21% Similarity=0.345 Sum_probs=250.3
Q ss_pred eeeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcc-cccccCCCCCCCCCCCCccccccCCCccccc
Q 011600 125 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV-KYCYEQKEPKFDPTVSQSYSNVSCSSTICTS 203 (481)
Q Consensus 125 ~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~-~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~ 203 (481)
..+|+. +..+.+|+++|.||||+|++.|++||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 52 ~~~pl~---~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~-------- 118 (375)
T 1miq_A 52 DVIELD---DVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIK--NLYDSSKSKSYEKDG-------- 118 (375)
T ss_dssp BCCCGG---GTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGS--CCBCGGGCTTCEEEE--------
T ss_pred ceEEcc---cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCC--CcCCCccCCceEECC--------
Confidence 456776 345789999999999999999999999999999999994 468765 899999999999875
Q ss_pred ccccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEe----cCCCC--CCcceeeecCCCCC
Q 011600 204 LQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQN----NRGLF--GGAAGLMGLGRDPI 277 (481)
Q Consensus 204 ~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~----~~g~~--~~~~GilGLg~~~~ 277 (481)
|.|.+.|++|+ +.|.+++|+|+|++ ..+++ .|||++. +. .| ...+||||||++.+
T Consensus 119 ---------------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~-~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~ 179 (375)
T 1miq_A 119 ---------------TKVDITYGSGT-VKGFFSKDLVTLGH-LSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDL 179 (375)
T ss_dssp ---------------EEEEEEETTEE-EEEEEEEEEEEETT-EEEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCT
T ss_pred ---------------cEEEEEeCCCe-EEEEEEEEEEEEcC-ceECc-EEEEEEecccccc-ccccCCCceEEeCCCCcc
Confidence 79999999998 79999999999998 68899 9999998 54 33 36899999999987
Q ss_pred ch------hhhhhhh---cCCceEEeccCCCCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEe
Q 011600 278 SL------VSQTATK---YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKL 344 (481)
Q Consensus 278 Sl------~sQ~~~~---~~~~FS~cL~~~~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l 344 (481)
+. +.|+..+ ..++||+||++.....|.|+|||+|+ +++.|+|+.. ..+|.|.|+ |+|+++.+
T Consensus 180 s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~-i~v~g~~~ 254 (375)
T 1miq_A 180 SIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNH----DLYWQIDLD-VHFGKQTM 254 (375)
T ss_dssp TCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSS----SSSSEEEEE-EEETTEEE
T ss_pred cccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCC----CceEEEEEE-EEECCEEc
Confidence 64 3344443 26899999998654689999999985 5899999976 679999999 99999887
Q ss_pred eecccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCeEEEE
Q 011600 345 SIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSV 424 (481)
Q Consensus 345 ~~~~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~l 424 (481)
.. ..+||||||++++||+++|++|.+++.+. ++...+. |.++|.. ..+|+|+|+| ||++++|
T Consensus 255 ----~~---~~aiiDSGTs~~~lP~~~~~~l~~~~~~~---~~~~~g~------~~~~C~~-~~~P~i~f~f-~g~~~~l 316 (375)
T 1miq_A 255 ----EK---ANVIVDSGTTTITAPSEFLNKFFANLNVI---KVPFLPF------YVTTCDN-KEMPTLEFKS-ANNTYTL 316 (375)
T ss_dssp ----EE---EEEEECTTBSSEEECHHHHHHHHHHHTCE---ECTTSSC------EEEETTC-TTCCCEEEEC-SSCEEEE
T ss_pred ----cc---ceEEecCCCccEEcCHHHHHHHHHHhCCc---ccCCCCe------EEEECCC-CCCCcEEEEE-CCEEEEE
Confidence 11 46999999999999999999999999764 2222222 3344444 5799999999 7899999
Q ss_pred CCCCcEEEeC--CCceEE-EEEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCC
Q 011600 425 DKTGIMYASN--ISQVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 425 ~~~~~l~~~~--~~~~Cl-a~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~ 479 (481)
++++|+++.. ....|+ +|.+.+...+.||||++|||++|+|||++++|||||+++
T Consensus 317 ~~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 317 EPEYYMNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp CGGGSEEESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CHHHhEeeccCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 9999999864 346898 888764323689999999999999999999999999864
No 21
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.4e-53 Score=432.80 Aligned_cols=301 Identities=22% Similarity=0.363 Sum_probs=247.6
Q ss_pred eeeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCC--cc--------cccccCCCCCCCCCCCCccccc
Q 011600 125 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEP--CV--------KYCYEQKEPKFDPTVSQSYSNV 194 (481)
Q Consensus 125 ~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~--C~--------~~C~~~~~~~f~ps~SsT~~~~ 194 (481)
+.+|+.. ++++|+++|.||||||++.|++||||+++||+|.. |. ..|.. ++.|||++|+||+..
T Consensus 3 v~~~l~~----~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~--~~~y~~~~SsT~~~~ 76 (342)
T 3pvk_A 3 VPVTLHN----EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQ--KGTYDPSGSSASQDL 76 (342)
T ss_dssp EEEEEEE----CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGT--TCCBCGGGCTTCEEE
T ss_pred cceEEec----CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCC--CCcCCCccCcceeec
Confidence 4566654 36789999999999999999999999999998543 42 35754 489999999999997
Q ss_pred cCCCcccccccccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCCCCCCcceeeecCC
Q 011600 195 SCSSTICTSLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLFGGAAGLMGLGR 274 (481)
Q Consensus 195 ~C~s~~C~~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g~~~~~~GilGLg~ 274 (481)
. |.|.+.|+||+.+.|.+++|+|+|++ ..++++.|||++... ..+||||||+
T Consensus 77 ~-----------------------~~~~i~Yg~gs~~~G~~~~D~v~ig~-~~v~~~~fg~~~~~~----~~~GilGLg~ 128 (342)
T 3pvk_A 77 N-----------------------TPFKIGYGDGSSSQGTLYKDTVGFGG-VSIKNQVLADVDSTS----IDQGILGVGY 128 (342)
T ss_dssp E-----------------------EEEEEECSSSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEES----SSSCEEECSC
T ss_pred C-----------------------CeEEEEecCCCeEEEEEEEEEEEECC-EEecceEEEEEEccC----CCccEEEecC
Confidence 5 79999999999899999999999998 689999999999876 4899999999
Q ss_pred CCC-------chhhhhhhh---cCCceEEeccCCCCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEc
Q 011600 275 DPI-------SLVSQTATK---YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVG 340 (481)
Q Consensus 275 ~~~-------Sl~sQ~~~~---~~~~FS~cL~~~~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVg 340 (481)
..+ +++.|+..+ ..++||+||.+.....|.|+|||+|+ +++.|+|+.. ..+|.|+|++|+|+
T Consensus 129 ~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~ 204 (342)
T 3pvk_A 129 KTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTS----DRELRISLGSVEVS 204 (342)
T ss_dssp GGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCC----SSSCEEEEEEEEET
T ss_pred ccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCc----cceEEEEEeEEEEC
Confidence 874 566676664 25899999987655689999999764 6899999987 45899999999999
Q ss_pred cEEeeecccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCe
Q 011600 341 GQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGV 420 (481)
Q Consensus 341 g~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~ 420 (481)
++.+..+. ..+||||||++++||+++|++|.+++.+...... .+ ..+|.++|. ..|.|+|+|.+|+
T Consensus 205 g~~~~~~~-----~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~--~~----~~~~~~~C~---~~p~i~f~f~~g~ 270 (342)
T 3pvk_A 205 GKTINTDN-----VDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDS--NG----NSFYEVDCN---LSGDVVFNFSKNA 270 (342)
T ss_dssp TEEEEEEE-----EEEEECTTCSSEEECHHHHHHHHHHTTCEEEECT--TS----CEEEEECSC---CCSEEEEEESTTC
T ss_pred CEEecCCC-----ceEEEeCCCCCeecCHHHHHHHHHHcCCeecccC--CC----ceEEEEecC---CCCceEEEECCCC
Confidence 99987542 3599999999999999999999999987643211 11 123555555 3599999996689
Q ss_pred EEEECCCCcEEEeC--C---CceEE-EEEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCCCC
Q 011600 421 EVSVDKTGIMYASN--I---SQVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 481 (481)
Q Consensus 421 ~~~l~~~~~l~~~~--~---~~~Cl-a~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~C~ 481 (481)
+++|++++|+++.. . ...|+ ++.+. +.+|||+.|||++|+|||++++|||||+++|+
T Consensus 271 ~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~----~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~ 333 (342)
T 3pvk_A 271 KISVPASEFAASLQGDDGQPYDKCQLLFDVN----DANILGDNFLRSAYIVYDLDDNEISLAQVKYT 333 (342)
T ss_dssp EEEEEGGGGEEC----------CEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEEEEBCCC
T ss_pred EEEEcHHHheeeccccCCCcCCeeEEEEeeC----CCeEeCHHHHhcEEEEEECCCCEEEEEecCCC
Confidence 99999999998731 2 26798 55542 46999999999999999999999999999995
No 22
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-53 Score=438.98 Aligned_cols=307 Identities=22% Similarity=0.379 Sum_probs=246.5
Q ss_pred ceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcccccccCCCCCCCCCCCCccccccCCCcccccccccCCCCCCCCC
Q 011600 137 AGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPACAS 216 (481)
Q Consensus 137 ~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~~~~~~~~~~~C~~ 216 (481)
+..|+++|.||||+|++.|+|||||+++||+|.+|.. |+ +.|||++|+||+...
T Consensus 12 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~-~~----~~f~~~~SsT~~~~~--------------------- 65 (383)
T 2ewy_A 12 GRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSY-ID----TYFDTERSSTYRSKG--------------------- 65 (383)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTT-BS----CCCCGGGCTTCEEEE---------------------
T ss_pred CCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCc-cc----cCcccccCccceeCC---------------------
Confidence 4579999999999999999999999999999999843 53 789999999999875
Q ss_pred CCceeeEEcCCCCeEEEEEEEEEEEeCCCcccC-ceEEEEEEecCCCC---CCcceeeecCCCCCc------------hh
Q 011600 217 STCLYGIQYGDSSFSIGFFGKETLTLTPRDVFP-NFLFGCGQNNRGLF---GGAAGLMGLGRDPIS------------LV 280 (481)
Q Consensus 217 ~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~-~~~FGc~~~~~g~~---~~~~GilGLg~~~~S------------l~ 280 (481)
|.|.+.|++|+ +.|.+++|+|+|++..... .+.|+|..+..+.| ...+||||||+..++ |+
T Consensus 66 --~~~~i~Yg~Gs-~~G~~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~ 142 (383)
T 2ewy_A 66 --FDVTVKYTQGS-WTGFVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLV 142 (383)
T ss_dssp --EEEEEECSSCE-EEEEEEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred --ceEEEEECCcE-EEEEEEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHH
Confidence 79999999997 6899999999998632222 46789987766655 257999999998764 34
Q ss_pred hhhhhhcCCceEEeccCC-------CCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEeeeccc
Q 011600 281 SQTATKYKKLFSYCLPSS-------ASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAAS 349 (481)
Q Consensus 281 sQ~~~~~~~~FS~cL~~~-------~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~~ 349 (481)
+|... .++||+||... ....|.|+|||+|+ +++.|+|+.. ..+|.|.|++|+|+++.+.++..
T Consensus 143 ~q~~i--~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~~~~~~~~ 216 (383)
T 2ewy_A 143 TQANI--PNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKE----EWYYQIEILKLEIGGQSLNLDCR 216 (383)
T ss_dssp HHHTC--CSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSS----BTTBBCCEEEEEETTEECCCCTT
T ss_pred HccCC--CcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCC----CceEEEEEEEEEECCEEcccccc
Confidence 44433 58999998631 23579999999874 6899999987 57899999999999999987766
Q ss_pred ccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCC--CCcccceeeccCCcccccCeEEEEEcCC-----eEE
Q 011600 350 VFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPA--LSLLDTCYDFSKYSTVTLPQISLFFSGG-----VEV 422 (481)
Q Consensus 350 ~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~i~f~f~gg-----~~~ 422 (481)
.|....+||||||++++||+++|++|++++.+.+.......+ ......|+.........+|.|+|+|.|+ .++
T Consensus 217 ~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~ 296 (383)
T 2ewy_A 217 EYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRI 296 (383)
T ss_dssp TTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEE
T ss_pred ccCCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEE
Confidence 565468999999999999999999999999987532111111 1124569876544445799999999654 389
Q ss_pred EECCCCcEEEeC---CCceEEEE--EeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCCCC
Q 011600 423 SVDKTGIMYASN---ISQVCLAF--AGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 481 (481)
Q Consensus 423 ~l~~~~~l~~~~---~~~~Cla~--~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~C~ 481 (481)
+|++++|+++.. .+..|++| .+. .+.||||+.|||++|+|||++++|||||+++|+
T Consensus 297 ~l~~~~yi~~~~~~~~~~~C~~~~i~~~---~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 357 (383)
T 2ewy_A 297 TILPQLYIQPMMGAGLNYECYRFGISPS---TNALVIGATVMEGFYVIFDRAQKRVGFAASPCA 357 (383)
T ss_dssp EECHHHHEEEECCCTTCSEEEEESEEEE---SSCEEECHHHHTTEEEEEETTTTEEEEEECTTC
T ss_pred EEChHHheeecccCCCCceeEEEEecCC---CCcEEEChHHhCCeeEEEECCCCeEEEEeccCC
Confidence 999999998863 35689864 332 346999999999999999999999999999994
No 23
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.2e-53 Score=446.72 Aligned_cols=301 Identities=20% Similarity=0.334 Sum_probs=249.9
Q ss_pred eeeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcc-cccccCCCCCCCCCCCCccccccCCCccccc
Q 011600 125 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV-KYCYEQKEPKFDPTVSQSYSNVSCSSTICTS 203 (481)
Q Consensus 125 ~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~-~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~ 203 (481)
..+|+. +..+.+|+++|.||||||++.|++||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 128 ~~~~L~---n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~--~~ydps~SsT~~~~~-------- 194 (453)
T 2bju_A 128 DNIELV---DFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTK--HLYDSSKSRTYEKDG-------- 194 (453)
T ss_dssp EEEEEE---EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGS--CCBCGGGCTTCEEEE--------
T ss_pred CceeeE---ecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCC--CcCCCccCCceeECC--------
Confidence 456775 345789999999999999999999999999999999994 468754 899999999999875
Q ss_pred ccccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecC--CC-C--CCcceeeecCCCCCc
Q 011600 204 LQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNR--GL-F--GGAAGLMGLGRDPIS 278 (481)
Q Consensus 204 ~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~--g~-~--~~~~GilGLg~~~~S 278 (481)
|.|.+.|+||+ +.|.+++|+|+|++ ..++ +.|||++... +. | ...+||||||++.++
T Consensus 195 ---------------~~~~i~YgdGs-~~G~~~~Dtv~ig~-~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s 256 (453)
T 2bju_A 195 ---------------TKVEMNYVSGT-VSGFFSKDLVTVGN-LSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLS 256 (453)
T ss_dssp ---------------EEEEEECSSSE-EEEEEEEEEEEETT-EEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGS
T ss_pred ---------------cEEEEEcCCCC-eEEEEEEEEEEEeC-cEEE-EEEEEEEEecccCccccccCCceeEeccCCccc
Confidence 79999999998 79999999999998 6888 9999999987 52 3 468999999998766
Q ss_pred h------hhhhhhh---cCCceEEeccCCCCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEee
Q 011600 279 L------VSQTATK---YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLS 345 (481)
Q Consensus 279 l------~sQ~~~~---~~~~FS~cL~~~~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~ 345 (481)
. +.++..+ ..++||+||++.+...|.|+|||+|+ +++.|+|+.. +.+|.|.|+ |+|++ .+
T Consensus 257 ~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~----~~~w~V~l~-I~Vgg-~~- 329 (453)
T 2bju_A 257 IGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNH----DLYWQITLD-AHVGN-IM- 329 (453)
T ss_dssp TTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEE----ETTEEEEEE-EEETT-EE-
T ss_pred ccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCC----CceEEEEEE-EEECc-EE-
Confidence 4 3344443 26899999998654589999999985 6899999987 679999999 99999 43
Q ss_pred ecccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCeEEEEC
Q 011600 346 IAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVD 425 (481)
Q Consensus 346 ~~~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~l~ 425 (481)
+ . ..++||||||++++||+++|++|.+++.+. +...+ ..|.++|.. ..+|+|+|+| ||++++|+
T Consensus 330 ~--~---~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~----~~~~g-----~~~~v~C~~-~~~P~itf~f-gg~~~~l~ 393 (453)
T 2bju_A 330 L--E---KANCIVDSGTSAITVPTDFLNKMLQNLDVI----KVPFL-----PFYVTLCNN-SKLPTFEFTS-ENGKYTLE 393 (453)
T ss_dssp E--E---EEEEEECTTCCSEEECHHHHHHHTTTSSCE----ECTTS-----SCEEEETTC-TTCCCEEEEC-SSCEEEEC
T ss_pred e--c---cccEEEcCCCCeEecCHHHHHHHHHHhCCc----ccCCC-----ceEEEecCC-CCCCcEEEEE-CCEEEEEC
Confidence 2 1 146999999999999999999999888653 11111 134555554 6799999999 78999999
Q ss_pred CCCcEEEeC--CCceEE-EEEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCC
Q 011600 426 KTGIMYASN--ISQVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 426 ~~~~l~~~~--~~~~Cl-a~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~ 479 (481)
+++|+++.. ....|+ +|.+.+...+.||||++|||++|+|||++++|||||++.
T Consensus 394 ~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 394 PEYYLQHIEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp HHHHEEECTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred HHHhEeecccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 999999864 346898 788764334589999999999999999999999999864
No 24
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=4.8e-53 Score=446.22 Aligned_cols=317 Identities=22% Similarity=0.404 Sum_probs=251.5
Q ss_pred eeeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcc--cccccCCCCCCCCCCCCccccccCCCcccc
Q 011600 125 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV--KYCYEQKEPKFDPTVSQSYSNVSCSSTICT 202 (481)
Q Consensus 125 ~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~--~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~ 202 (481)
..+|+.. ..+.+|+++|.||||||++.|+|||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 42 ~~~~l~n---~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~~--~~y~~~~SsT~~~~~------- 109 (478)
T 1qdm_A 42 DIVALKN---YMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLH--SRYKAGASSTYKKNG------- 109 (478)
T ss_dssp CSGGGCC---GGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGGS--CCBCGGGCTTCBCCC-------
T ss_pred ceEEeEe---ccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccCC--CCCCcccCCCeeeCC-------
Confidence 4567763 35789999999999999999999999999999999994 469866 799999999998754
Q ss_pred cccccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCCC-C--CCcceeeecCCCCCch
Q 011600 203 SLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGL-F--GGAAGLMGLGRDPISL 279 (481)
Q Consensus 203 ~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g~-~--~~~~GilGLg~~~~Sl 279 (481)
|.|.+.|++|+ +.|++++|+|+|++ ..++++.|||++...+. | ..++||||||++.+++
T Consensus 110 ----------------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~-~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~ 171 (478)
T 1qdm_A 110 ----------------KPAAIQYGTGS-IAGYFSEDSVTVGD-LVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISV 171 (478)
T ss_dssp ----------------CEEEEEETTEE-EEEEEEEEEEEETT-EEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCG
T ss_pred ----------------cEEEEEcCCCC-eEEEEEEEEEEECC-eEECCEEEEEEEecCCcccccccccceeccccccccc
Confidence 68999999997 79999999999998 68999999999987652 2 3679999999998774
Q ss_pred h------hhhhhh---cCCceEEeccCCC--CCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEe
Q 011600 280 V------SQTATK---YKKLFSYCLPSSA--SSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKL 344 (481)
Q Consensus 280 ~------sQ~~~~---~~~~FS~cL~~~~--~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l 344 (481)
. .++..+ ..++||+||.+.. ...|.|+|||+|+ +++.|+|+.. ..+|.|+|++|+|+++.+
T Consensus 172 ~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~----~~~w~v~l~~i~v~g~~~ 247 (478)
T 1qdm_A 172 GKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQ----KGYWQFDMGDVLVGGKST 247 (478)
T ss_dssp GGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEE----ETTEEEEECCEEETTEEC
T ss_pred CCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccC----CCeEEEEEeEEEECCEEE
Confidence 2 223322 2689999998753 2479999999886 4799999986 679999999999999987
Q ss_pred eecccccccCCeEEeccCceeecCHHHHHHHHHHHHHhh----------------------hcCCC-----------CCC
Q 011600 345 SIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFM----------------------SKYPT-----------APA 391 (481)
Q Consensus 345 ~~~~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~----------------------~~~~~-----------~~~ 391 (481)
.++... .++||||||++++||+++|++|.+++.+.. .+.+. ..+
T Consensus 248 ~~~~~~---~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~ 324 (478)
T 1qdm_A 248 GFCAGG---CAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDG 324 (478)
T ss_dssp STTTTC---EEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC----
T ss_pred eecCCC---ceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCc
Confidence 654332 469999999999999999999999986431 00000 000
Q ss_pred ----------------------------------------------------CCcccceee---------ccCCcccccC
Q 011600 392 ----------------------------------------------------LSLLDTCYD---------FSKYSTVTLP 410 (481)
Q Consensus 392 ----------------------------------------------------~~~~~~Cy~---------~~~~~~~~~P 410 (481)
....+.|+. ++|.....+|
T Consensus 325 ~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~~lP 404 (478)
T 1qdm_A 325 TRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMP 404 (478)
T ss_dssp -----------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGTTCC
T ss_pred cccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccccccc
Confidence 000123443 3455456799
Q ss_pred eEEEEEcCCeEEEECCCCcEEEeCC--CceEE-EEEeCC---CCCCceeecHhhhceeEEEEECCCCEEEEEeCC
Q 011600 411 QISLFFSGGVEVSVDKTGIMYASNI--SQVCL-AFAGNS---DPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 411 ~i~f~f~gg~~~~l~~~~~l~~~~~--~~~Cl-a~~~~~---~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~ 479 (481)
+|+|+| ||++++|+|++|+++... ...|+ +|...+ ..++.||||++||+++|+|||++++|||||++.
T Consensus 405 ~i~f~~-gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 405 DIEFTI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp CEEEEE-TTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cEEEEE-CCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 999999 789999999999998654 35899 476543 124689999999999999999999999999863
No 25
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=5.3e-53 Score=436.96 Aligned_cols=309 Identities=20% Similarity=0.342 Sum_probs=246.6
Q ss_pred ceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcccccccCCCCCCCCCCCCccccccCCCcccccccccCCCCCCCCC
Q 011600 137 AGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPACAS 216 (481)
Q Consensus 137 ~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~~~~~~~~~~~C~~ 216 (481)
+..|+++|.||||+|++.|+|||||+++||+|.+|.. | ++.|||++|+||+...
T Consensus 20 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~-~----~~~y~~~~SsT~~~~~--------------------- 73 (395)
T 2qp8_A 20 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPF-L----HRYYQRQLSSTYRDLR--------------------- 73 (395)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTT-C----SCCCCGGGCTTCEEEE---------------------
T ss_pred CceEEEEEEecCCCceEEEEEecCCCceEEECCCCcc-c----cCCcCcccCCCceeCC---------------------
Confidence 4679999999999999999999999999999998842 4 3789999999999875
Q ss_pred CCceeeEEcCCCCeEEEEEEEEEEEeCCCcccC-ceEEEEEEecCCCC---CCcceeeecCCCCCch--------hhhhh
Q 011600 217 STCLYGIQYGDSSFSIGFFGKETLTLTPRDVFP-NFLFGCGQNNRGLF---GGAAGLMGLGRDPISL--------VSQTA 284 (481)
Q Consensus 217 ~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~-~~~FGc~~~~~g~~---~~~~GilGLg~~~~Sl--------~sQ~~ 284 (481)
|.|.+.|+||+ +.|.+++|+|+|++...++ .+.|+|.....+.| ...+||||||+..++. +.|+.
T Consensus 74 --~~~~i~Yg~Gs-~~G~~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~ 150 (395)
T 2qp8_A 74 --KGVYVPYTQGK-WEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLV 150 (395)
T ss_dssp --EEEEEECSSCE-EEEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred --ceEEEEECCcE-EEEEEEeEEEEECCCCCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHH
Confidence 79999999998 5899999999998423333 36788887766655 3689999999987643 22443
Q ss_pred hh--cCCceEEeccCC----------CCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEeeecc
Q 011600 285 TK--YKKLFSYCLPSS----------ASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAA 348 (481)
Q Consensus 285 ~~--~~~~FS~cL~~~----------~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~ 348 (481)
.+ ..++||+||.+. ....|.|+|||+|+ +++.|+|+.. ..+|.|.|++|+|+++.+.++.
T Consensus 151 ~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~~~~~~~ 226 (395)
T 2qp8_A 151 KQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQDLKMDC 226 (395)
T ss_dssp HHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS----BTTBBCCEEEEEETTEECCCCG
T ss_pred HccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCC----CceEEEEEEEEEECCEEcccCc
Confidence 33 147999999753 12579999999885 5899999987 5789999999999999998776
Q ss_pred cccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCC--CCcccceeeccCCcccccCeEEEEEcCCe-----E
Q 011600 349 SVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPA--LSLLDTCYDFSKYSTVTLPQISLFFSGGV-----E 421 (481)
Q Consensus 349 ~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~-----~ 421 (481)
..|....+||||||++++||+++|++|.+++.+.+.......+ ......|+.........+|.|+|+|.|+. +
T Consensus 227 ~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~ 306 (395)
T 2qp8_A 227 KEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFR 306 (395)
T ss_dssp GGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEE
T ss_pred cccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEEEEEccCCCCceEE
Confidence 6565468999999999999999999999999987532111111 11134698765444457999999997653 7
Q ss_pred EEECCCCcEEEeCC----CceEEE--EEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCCCC
Q 011600 422 VSVDKTGIMYASNI----SQVCLA--FAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 481 (481)
Q Consensus 422 ~~l~~~~~l~~~~~----~~~Cla--~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~C~ 481 (481)
++|++++|+++... ...|++ +.+. ...||||+.|||++|+|||++++|||||+++|+
T Consensus 307 ~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~---~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 369 (395)
T 2qp8_A 307 ITILPQQYLRPVEDVATSQDDCYKFAISQS---STGTVMGAVIMEGFYVVFDRARKRIGFAVSACH 369 (395)
T ss_dssp EEECHHHHEEEECCTTCCSCEEEEECEEEE---SSCEEECHHHHTTEEEEEETTTTEEEEEEETTC
T ss_pred EEECHHHhEeecccCCCCCceEEEEEecCC---CCcEEEChHHhCCeeEEEECCCCEEEEEeccCC
Confidence 99999999988632 358974 4432 346999999999999999999999999999995
No 26
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.2e-52 Score=435.20 Aligned_cols=311 Identities=21% Similarity=0.350 Sum_probs=247.5
Q ss_pred ceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcccccccCCCCCCCCCCCCccccccCCCcccccccccCCCCCCCCC
Q 011600 137 AGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPACAS 216 (481)
Q Consensus 137 ~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~~~~~~~~~~~C~~ 216 (481)
..+|+++|.||||||++.|+|||||+++||+|.+| |.. ++.|||++|+||+...
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c---~~~--~~~y~~~~SsT~~~~~--------------------- 80 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH---PFL--HRYYQRQLSSTYRDLR--------------------- 80 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC---TTC--SCCCCGGGCTTCEEEE---------------------
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC---Ccc--cCCcCcccCcccccCC---------------------
Confidence 35799999999999999999999999999999988 543 4899999999999875
Q ss_pred CCceeeEEcCCCCeEEEEEEEEEEEeCCCcccC-ceEEEEEEecCCCC---CCcceeeecCCCCCch--------hhhhh
Q 011600 217 STCLYGIQYGDSSFSIGFFGKETLTLTPRDVFP-NFLFGCGQNNRGLF---GGAAGLMGLGRDPISL--------VSQTA 284 (481)
Q Consensus 217 ~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~-~~~FGc~~~~~g~~---~~~~GilGLg~~~~Sl--------~sQ~~ 284 (481)
|.|.+.|++|+ +.|.+++|+|+|++...++ .+.|+|.....+.| ...+||||||+..++. +.|+.
T Consensus 81 --~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~ 157 (402)
T 3vf3_A 81 --KGVYVPYTQGK-WEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLV 157 (402)
T ss_dssp --EEEEEECSSCE-EEEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred --CEEEEEECcEE-EEEEEEEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHH
Confidence 79999999998 6999999999998533333 34588888776654 3689999999987653 33444
Q ss_pred hh--cCCceEEeccCC----------CCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEeeecc
Q 011600 285 TK--YKKLFSYCLPSS----------ASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAA 348 (481)
Q Consensus 285 ~~--~~~~FS~cL~~~----------~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~ 348 (481)
.+ ..++||+||.+. ....|.|+|||+|+ +++.|+|+.. ..+|.|.|++|+|+++.+.++.
T Consensus 158 ~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~g~~~~~~~ 233 (402)
T 3vf3_A 158 KQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQDLKMDC 233 (402)
T ss_dssp HHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSS----BTTBEECEEEEEETTEECCCCG
T ss_pred HccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCc----CcEEEEEEeEEEECCEEecccc
Confidence 43 147999999742 23479999999885 5899999987 6789999999999999998776
Q ss_pred cccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCC--CCcccceeeccCCcccccCeEEEEEcCCe-----E
Q 011600 349 SVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPA--LSLLDTCYDFSKYSTVTLPQISLFFSGGV-----E 421 (481)
Q Consensus 349 ~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~-----~ 421 (481)
..|....+||||||++++||+++|++|.+++.+.......... ...+..|+.........+|+|+|+|.|+. +
T Consensus 234 ~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~ 313 (402)
T 3vf3_A 234 KEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFR 313 (402)
T ss_dssp GGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEE
T ss_pred cccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEEecCCCCceEE
Confidence 5554467999999999999999999999999998532111111 12246798876544457999999996543 6
Q ss_pred EEECCCCcEEEeCCC----ceEEEEEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCCCC
Q 011600 422 VSVDKTGIMYASNIS----QVCLAFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 481 (481)
Q Consensus 422 ~~l~~~~~l~~~~~~----~~Cla~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~C~ 481 (481)
++|++++|+++.... ..|++|.... ..+.||||++|||++|+|||++++|||||+++|+
T Consensus 314 ~~l~~~~yi~~~~~~~~~~~~C~~~~~~~-~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 376 (402)
T 3vf3_A 314 ITILPQQYLRPVEDVATSQDDCYKFAISQ-SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACH 376 (402)
T ss_dssp EEECHHHHEEECCCGGGTTEEEEEECEEE-ESSCEEECHHHHTTEEEEEEGGGTEEEEEEETTC
T ss_pred EEECHHHheehhccCCCCCceEEEEeccC-CCCcEEEChHHhCCeEEEEECCCCEEEEEecccC
Confidence 999999999986432 4899643221 2356999999999999999999999999999995
No 27
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=8.6e-53 Score=443.07 Aligned_cols=311 Identities=21% Similarity=0.350 Sum_probs=250.4
Q ss_pred ceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcccccccCCCCCCCCCCCCccccccCCCcccccccccCCCCCCCCC
Q 011600 137 AGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPACAS 216 (481)
Q Consensus 137 ~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~~~~~~~~~~~C~~ 216 (481)
+..|+++|.||||+|++.|+|||||+++||+|.+| |.. ++.|||++|+||+...
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c---c~~--~~~y~~~~SsT~~~~~--------------------- 126 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH---PFL--HRYYQRQLSSTYRDLR--------------------- 126 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC---TTC--SCCCCGGGCTTCEEEE---------------------
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc---ccc--CCcccCCCCCCcccCC---------------------
Confidence 45899999999999999999999999999999988 643 4899999999999875
Q ss_pred CCceeeEEcCCCCeEEEEEEEEEEEeCCCcccC-ceEEEEEEecCCCC---CCcceeeecCCCCCch--------hhhhh
Q 011600 217 STCLYGIQYGDSSFSIGFFGKETLTLTPRDVFP-NFLFGCGQNNRGLF---GGAAGLMGLGRDPISL--------VSQTA 284 (481)
Q Consensus 217 ~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~-~~~FGc~~~~~g~~---~~~~GilGLg~~~~Sl--------~sQ~~ 284 (481)
|.|.+.|++|+ +.|.+++|+|+|++...+. .+.|+|+....+.| ...+||||||+..++. +.|+.
T Consensus 127 --~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~ 203 (455)
T 3lpj_A 127 --KGVYVPYTQGK-WEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLV 203 (455)
T ss_dssp --EEEEEECSSCE-EEEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred --ccEEEEeCCeE-EEEEEEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHH
Confidence 79999999998 5999999999998532222 36799988877654 3689999999987653 33444
Q ss_pred hh--cCCceEEeccCC----------CCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEeeecc
Q 011600 285 TK--YKKLFSYCLPSS----------ASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAA 348 (481)
Q Consensus 285 ~~--~~~~FS~cL~~~----------~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~ 348 (481)
.+ ..++||+||.+. ....|.|+|||+|+ +++.|+|+.. ..+|.|.|++|+|+++.+.++.
T Consensus 204 ~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~g~~~~~~~ 279 (455)
T 3lpj_A 204 KQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQDLKMDC 279 (455)
T ss_dssp HHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS----BTTBBCCEEEEEETTEECCCCG
T ss_pred HccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCC----CceeEEEEeEEEECCEEccccc
Confidence 33 147999999753 23479999999985 6899999987 6799999999999999998776
Q ss_pred cccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCC--CCcccceeeccCCcccccCeEEEEEcCCe-----E
Q 011600 349 SVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPA--LSLLDTCYDFSKYSTVTLPQISLFFSGGV-----E 421 (481)
Q Consensus 349 ~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~-----~ 421 (481)
..|....+||||||++++||+++|++|.+++.+.+........ ...+..|+.........+|+|+|+|.|+. +
T Consensus 280 ~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~ 359 (455)
T 3lpj_A 280 KEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFR 359 (455)
T ss_dssp GGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEE
T ss_pred cccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEEEEEcCCCcCceEE
Confidence 6554467999999999999999999999999998542111111 12246798766544456999999996553 5
Q ss_pred EEECCCCcEEEeCCC----ceEEEEEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCCCC
Q 011600 422 VSVDKTGIMYASNIS----QVCLAFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 481 (481)
Q Consensus 422 ~~l~~~~~l~~~~~~----~~Cla~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~C~ 481 (481)
++|++++|+++.... ..|++|.... ..+.||||++|||++|+|||++++|||||+++|+
T Consensus 360 ~~l~~~~yi~~~~~~~~~~~~C~~f~~~~-~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 422 (455)
T 3lpj_A 360 ITILPQQYLRPVEDVATSQDDCYKFAISQ-SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACH 422 (455)
T ss_dssp EEECHHHHEEEECCTTCCSCEEEEECEEE-ESSCEEECHHHHTTEEEEEETTTTEEEEEEETTC
T ss_pred EEECHHHheEeccCCCCCCceEEEEeccC-CCCcEEEChHHhCCeEEEEECCCCEEEEEecccc
Confidence 999999999986432 5899753221 2357999999999999999999999999999995
No 28
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=6.3e-53 Score=426.27 Aligned_cols=303 Identities=14% Similarity=0.204 Sum_probs=249.1
Q ss_pred eeeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcc-cccccCCCCCCCCCCCCccccccCCCccccc
Q 011600 125 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV-KYCYEQKEPKFDPTVSQSYSNVSCSSTICTS 203 (481)
Q Consensus 125 ~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~-~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~ 203 (481)
+..|+. +..+.+|+++|.|| +|++.|++||||+++||+|.+|. ..|+.+.++.|||++| ||+...
T Consensus 7 ~~~~l~---n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~~-------- 72 (330)
T 1yg9_A 7 LYKLVH---VFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISDG-------- 72 (330)
T ss_dssp SCSCEE---EEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEEE--------
T ss_pred eEeeee---cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEECC--------
Confidence 345555 34567899999999 89999999999999999999995 3695445589999999 998864
Q ss_pred ccccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCCCC--CCcceeeecCCCCCc---
Q 011600 204 LQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLF--GGAAGLMGLGRDPIS--- 278 (481)
Q Consensus 204 ~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g~~--~~~~GilGLg~~~~S--- 278 (481)
|.|.+.|+||+. .|.+++|+|+|++ ..++++.|||++.....| ...+||||||++.++
T Consensus 73 ---------------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~-~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~ 135 (330)
T 1yg9_A 73 ---------------NVQVKFFDTGSA-VGRGIEDSLTISQ-LTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNAL 135 (330)
T ss_dssp ---------------EEEEEETTTEEE-EEEEEEEEEEETT-EEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTT
T ss_pred ---------------CEEEEEECCceE-EEEEEEEEEEECC-EEEcCeEEEEEEEcccccccccCceEEEcCcchhcccc
Confidence 699999999984 9999999999998 689999999999983333 368999999999877
Q ss_pred ----hhhhhhhh--cCCceEEeccCCCCC--CceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEeee
Q 011600 279 ----LVSQTATK--YKKLFSYCLPSSASS--TGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSI 346 (481)
Q Consensus 279 ----l~sQ~~~~--~~~~FS~cL~~~~~~--~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~ 346 (481)
++.|+..+ ..++||+||.+..+. .|.|+|||+|+ +++.|+|+.. +.+|.|+|++|+|+++.+.
T Consensus 136 ~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~~~- 210 (330)
T 1yg9_A 136 KGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVG----DDSWKFRLDGVKIGDTTVA- 210 (330)
T ss_dssp SCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSC----TTSCCEECSEEEETTEEEE-
T ss_pred CCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCC----CCEEEEEeCeEEECCEEEc-
Confidence 44455433 278999999876332 79999999885 5899999985 6799999999999998865
Q ss_pred cccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCccccee-eccCCcccccCeEEEEEcCCeEEEEC
Q 011600 347 AASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCY-DFSKYSTVTLPQISLFFSGGVEVSVD 425 (481)
Q Consensus 347 ~~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy-~~~~~~~~~~P~i~f~f~gg~~~~l~ 425 (481)
... ..+||||||++++||+++|++|.+++++... . .+ . ..| .++|.....+|+|+|+| ||++++|+
T Consensus 211 -~~~---~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~---~-~g--~--~~~~~~~C~~~~~~p~i~f~f-gg~~~~l~ 277 (330)
T 1yg9_A 211 -PAG---TQAIIDTSKAIIVGPKAYVNPINEAIGCVVE---K-TT--T--RRICKLDCSKIPSLPDVTFVI-NGRNFNIS 277 (330)
T ss_dssp -CTT---CEEEECTTCSSEEEEHHHHHHHHHHHTCEEE---E-CS--S--CEEEEECGGGGGGSCCEEEEE-TTEEEEEC
T ss_pred -CCC---cEEEEecCCccccCCHHHHHHHHHHhCCccc---C-CC--c--eEEEEEECCCccccCcEEEEE-CCEEEEEC
Confidence 211 4699999999999999999999999966421 1 11 0 124 55666556799999999 79999999
Q ss_pred CCCcEEEeCCCceEE-EEEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCC
Q 011600 426 KTGIMYASNISQVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 426 ~~~~l~~~~~~~~Cl-a~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~ 479 (481)
+++|+++. +..|+ +|.+. ...+.||||++|||++|+|||++++|||||+++
T Consensus 278 ~~~y~~~~--~~~C~~~i~~~-~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 278 SQYYIQQN--GNLCYSGFQPC-GHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp HHHHEEEE--TTEEEESEEEE-TTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHHhcccC--CCcEEEEEEeC-CCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 99999987 67899 67765 234579999999999999999999999999864
No 29
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.6e-52 Score=438.70 Aligned_cols=300 Identities=17% Similarity=0.301 Sum_probs=251.0
Q ss_pred eeeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcc-cccccCCCCCCCCCCCCccccccCCCccccc
Q 011600 125 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV-KYCYEQKEPKFDPTVSQSYSNVSCSSTICTS 203 (481)
Q Consensus 125 ~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~-~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~ 203 (481)
..+|+. +..+.+|+++|.||||||++.|++||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 127 ~~~pL~---n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~--~~ydps~SsT~~~~~-------- 193 (451)
T 3qvc_A 127 DNVELK---DLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESK--NHYDSSKSKTYEKDD-------- 193 (451)
T ss_dssp CCCCGG---GGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTS--CCBCGGGCTTCEEEE--------
T ss_pred Ccccee---ecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCC--CCCCCCCCcccccCC--------
Confidence 456776 345789999999999999999999999999999999993 468654 899999999999864
Q ss_pred ccccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEe----cCCCC--CCcceeeecCCCCC
Q 011600 204 LQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQN----NRGLF--GGAAGLMGLGRDPI 277 (481)
Q Consensus 204 ~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~----~~g~~--~~~~GilGLg~~~~ 277 (481)
|.|.+.|+||+ +.|.+++|+|+|++ ..++ +.|||++. ..+ | ...+||||||++.+
T Consensus 194 ---------------~~f~i~YgdGs-~~G~~~~Dtv~igg-~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~ 254 (451)
T 3qvc_A 194 ---------------TPVKLTSKAGT-ISGIFSKDLVTIGK-LSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDL 254 (451)
T ss_dssp ---------------EEEEEECSSEE-EEEEEEEEEEEETT-EEEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCS
T ss_pred ---------------CEEEEEECCCE-EEEEEEEEEEEECC-EEEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcc
Confidence 79999999998 89999999999998 6888 99999998 655 4 25799999999875
Q ss_pred c------hhhhhhhh---cCCceEEeccCCCCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEe
Q 011600 278 S------LVSQTATK---YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKL 344 (481)
Q Consensus 278 S------l~sQ~~~~---~~~~FS~cL~~~~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l 344 (481)
+ ++.++..+ ..++||+||.+.....|.|+|||+|+ +++.|+|+.. +.+|.|+++ |+|+++ .
T Consensus 255 s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~----~~~w~v~l~-I~Vgg~-~ 328 (451)
T 3qvc_A 255 SIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNH----DLMWQVDLD-VHFGNV-S 328 (451)
T ss_dssp SSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSS----TTSSEEEEE-EEETTE-E
T ss_pred cccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEccc----CCeeEEEEE-EEECCc-c
Confidence 4 44555554 26899999998765689999999985 6899999986 689999999 999998 1
Q ss_pred eecccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCeEEEE
Q 011600 345 SIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSV 424 (481)
Q Consensus 345 ~~~~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~l 424 (481)
. . ...+||||||++++||++++++|.+++++.. ... ..+|.++|. ...+|+|+|+| ||.+++|
T Consensus 329 --~-~---~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~---~~~------~g~y~v~C~-~~~~P~itf~f-gg~~i~l 391 (451)
T 3qvc_A 329 --S-K---KANVILDSATSVITVPTEFFNQFVESASVFK---VPF------LSLYVTTCG-NTKLPTLEYRS-PNKVYTL 391 (451)
T ss_dssp --E-E---EEEEEECTTBSSEEECHHHHHHHHTTTTCEE---CTT------SSCEEEETT-CTTCCCEEEEE-TTEEEEE
T ss_pred --C-C---CceEEEeCCCccccCCHHHHHHHHHHcCCee---cCC------CCeEEeeCC-cCcCCcEEEEE-CCEEEEE
Confidence 1 1 1459999999999999999999999986652 111 124666777 56899999999 7899999
Q ss_pred CCCCcEEEeC--CCceEE-EEEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCC
Q 011600 425 DKTGIMYASN--ISQVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 425 ~~~~~l~~~~--~~~~Cl-a~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~ 479 (481)
++++|+++.. .+..|+ +|.+.+...+.||||++|||++|+|||++++|||||++.
T Consensus 392 p~~~yi~~~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 392 EPKQYLEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp CHHHHEEECTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred cHHHheeecccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 9999999864 357899 677664225689999999999999999999999999874
No 30
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=5.5e-52 Score=418.48 Aligned_cols=294 Identities=25% Similarity=0.344 Sum_probs=240.3
Q ss_pred CceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcccccccCCCCCCCCCCCCccccccCCCcccccccccCCCCCCCC
Q 011600 136 GAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPACA 215 (481)
Q Consensus 136 ~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~~~~~~~~~~~C~ 215 (481)
.+.+|+++|.|| +|++.|++||||+++||+|.+|.. |..+.++.|||++|+ ++..
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~-~~c~~~~~y~~~~Ss-~~~~--------------------- 66 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPS-SEQTGHDLYTPSSSA-TKLS--------------------- 66 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCH-HHHTTSCCCBCCSSC-EECT---------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCc-cccCCCCCCCchhcC-CccC---------------------
Confidence 468899999999 899999999999999999999953 655666899999998 5432
Q ss_pred CCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCCCC---CCcceeeecCCCCCch---------hhhh
Q 011600 216 SSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLF---GGAAGLMGLGRDPISL---------VSQT 283 (481)
Q Consensus 216 ~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g~~---~~~~GilGLg~~~~Sl---------~sQ~ 283 (481)
.|.|.+.|+||+.+.|.+++|+|+|++ ..++++.|||++...+.+ ...+||||||+..++. +.|+
T Consensus 67 --~~~~~i~Yg~Gs~~~G~~~~D~v~ig~-~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l 143 (325)
T 1ibq_A 67 --GYSWDISYGDGSSASGDVYRDTVTVGG-VTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTV 143 (325)
T ss_dssp --TCBEEEECSSSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred --CCEEEEEeCCCCEEEEEEEEeEEEECC-EEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHH
Confidence 279999999999889999999999998 689999999999876533 3689999999987664 3566
Q ss_pred hhhc-CCceEEeccCCCCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEeeecccccccCCeEE
Q 011600 284 ATKY-KKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTII 358 (481)
Q Consensus 284 ~~~~-~~~FS~cL~~~~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~ii 358 (481)
..+. .++||+||.+. ..|.|+|||+|+ +++.|+|+.. ...+|.|+|++|+|+++.+. ... ..+||
T Consensus 144 ~~~i~~~~FS~~l~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~w~v~l~~i~v~~~~~~--~~~---~~aii 213 (325)
T 1ibq_A 144 KSQLDSPLFAVQLKHD--APGVYDFGYIDDSKYTGSITYTDADS---SQGYWGFSTDGYSIGDGSSS--SSG---FSAIA 213 (325)
T ss_dssp GGGSSSSEEEEEEETT--EEEEEEESSCCGGGBSSCCEEEECBC---TTSSCEEEECEEEETTSCCB--SCC---EEEEE
T ss_pred HHhcCCcEEEEEecCC--CCceEEECCcChhhccCceEEEEcCC---CCceEEEEECcEEECCeecc--CCC---ceEEE
Confidence 5433 68999999863 479999999874 6899999974 25789999999999998764 222 45999
Q ss_pred eccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCeEEEECCCCcEEEeC--CC
Q 011600 359 DSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTGIMYASN--IS 436 (481)
Q Consensus 359 DSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~l~~~~~l~~~~--~~ 436 (481)
||||++++||+++|++|.+++.... +....+. |.++|. ..+|+|+|+| ||++++|++++|++... ..
T Consensus 214 DSGTt~~~lP~~~~~~i~~~i~~a~--~~~~~g~------~~~~C~--~~~P~i~f~f-gg~~~~i~~~~~~~~~~~~~~ 282 (325)
T 1ibq_A 214 DTGTTLILLDDEIVSAYYEQVSGAQ--ESYEAGG------YVFSCS--TDLPDFTVVI-GDYKAVVPGKYINYAPVSTGS 282 (325)
T ss_dssp CTTCCSEEECHHHHHHHHTTSTTCB--CCSSSSS------CEEETT--CCCCCEEEEE-TTEEEEECHHHHEEEESSTTC
T ss_pred eCCCCcEeCCHHHHHHHHHhCCCce--EcCcCCe------EEEEcC--CCCCcEEEEE-CCEEEEECHHHhcccccCCCC
Confidence 9999999999999999999984331 2222222 233444 3689999999 89999999999998753 34
Q ss_pred ceEEE-EEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCC
Q 011600 437 QVCLA-FAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 437 ~~Cla-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~ 479 (481)
..|++ |.+.+ ..+.||||+.|||++|+|||++++|||||+++
T Consensus 283 ~~C~~~i~~~~-~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 283 STCYGGIQSNS-GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp SEEEESEEECT-TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CeEEEEEEcCC-CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 78995 66552 34679999999999999999999999999874
No 31
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=4.9e-52 Score=418.55 Aligned_cols=293 Identities=24% Similarity=0.364 Sum_probs=239.5
Q ss_pred CceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcccccccCCCCCCCCCCCCccccccCCCcccccccccCCCCCCCC
Q 011600 136 GAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPACA 215 (481)
Q Consensus 136 ~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~~~~~~~~~~~C~ 215 (481)
.+.+|+++|.|| ||++.|++||||+++||+|.+|.. |..+.++.|||++|+ ++...
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~-~~c~~~~~y~~~~Ss-~~~~~-------------------- 68 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPS-SERSGHDYYTPGSSA-QKIDG-------------------- 68 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCH-HHHTTCCCBCCCTTC-EEEEE--------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCc-ccccCCCCCCccccC-CccCC--------------------
Confidence 468899999999 899999999999999999999953 655566899999999 55322
Q ss_pred CCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCCCC---CCcceeeecCCCCCch---------hhhh
Q 011600 216 SSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLF---GGAAGLMGLGRDPISL---------VSQT 283 (481)
Q Consensus 216 ~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g~~---~~~~GilGLg~~~~Sl---------~sQ~ 283 (481)
|.|.+.|+||+.+.|.+++|+|+|++ ..++++.|||++...+.+ ...+||||||++.++. ..|+
T Consensus 69 ---~~~~i~Yg~Gs~~~G~~~~D~v~ig~-~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l 144 (323)
T 1izd_A 69 ---ATWSISYGDGSSASGDVYKDKVTVGG-VSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNV 144 (323)
T ss_dssp ---EEEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred ---CeEEEEcCCCCeEEEEEEEEEEEECC-EEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHH
Confidence 79999999999889999999999998 689999999999886533 4689999999987664 3444
Q ss_pred hhh-cCCceEEeccCCCCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEeeecccccccCCeEE
Q 011600 284 ATK-YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTII 358 (481)
Q Consensus 284 ~~~-~~~~FS~cL~~~~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~ii 358 (481)
..+ ..++||+||.+. ..|.|+|||+|+ +++.|+|+.. ...+|.|+|++|+|++ .+. ... ..+||
T Consensus 145 ~~~i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~w~v~l~~i~v~~-~~~--~~~---~~aii 213 (323)
T 1izd_A 145 KSSLSEPIFAVALKHN--APGVYDFGYTDSSKYTGSITYTDVDN---SQGFWGFTADGYSIGS-DSS--SDS---ITGIA 213 (323)
T ss_dssp GGGSSSSEEEEECCTT--SCEEEEESSCCTTSEEEEEEEEECBC---TTSSCEEEESEEEETT-EEE--CCC---EEEEE
T ss_pred HHhccCcEEEEEccCC--CCCEEEECCcCccccccceEEEECCC---CCceEEEEECeEEECC-ccc--CCC---ceEEE
Confidence 433 268999999864 479999999886 5799999974 2578999999999999 543 222 35999
Q ss_pred eccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCeEEEECCCCcEEEeCCCce
Q 011600 359 DSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTGIMYASNISQV 438 (481)
Q Consensus 359 DSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~l~~~~~l~~~~~~~~ 438 (481)
||||++++||+++|++|.+++.... +....+. |.++|. ..+|+|+|+| ||++++|++++|++....+..
T Consensus 214 DSGTs~~~lp~~~~~~i~~~i~ga~--~~~~~g~------~~~~C~--~~~P~i~f~f-gg~~~~i~~~~~~~~~~~~~~ 282 (323)
T 1izd_A 214 DTGTTLLLLDDSIVDAYYEQVNGAS--YDSSQGG------YVFPSS--ASLPDFSVTI-GDYTATVPGEYISFADVGNGQ 282 (323)
T ss_dssp CTTCCSEEECHHHHHHHHTTSTTCE--EETTTTE------EEEETT--CCCCCEEEEE-TTEEEEECHHHHEEEECSTTE
T ss_pred eCCCcceeCCHHHHHHHHHhCCCcE--EcCcCCE------EEEECC--CCCceEEEEE-CCEEEecCHHHeEEecCCCCe
Confidence 9999999999999999999885321 1111121 444454 3689999999 899999999999988655678
Q ss_pred EEE-EEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCC
Q 011600 439 CLA-FAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 439 Cla-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~ 479 (481)
|++ |.+.+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 283 C~~~i~~~~-~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 283 TFGGIQSNS-GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp EEESEEECT-TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEcCC-CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 995 77653 34679999999999999999999999999864
No 32
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=7.2e-52 Score=417.31 Aligned_cols=292 Identities=24% Similarity=0.342 Sum_probs=237.8
Q ss_pred CceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcccccccCCCCCCCCCCCCccccccCCCcccccccccCCCCCCCC
Q 011600 136 GAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPACA 215 (481)
Q Consensus 136 ~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~~~~~~~~~~~C~ 215 (481)
.+.+|+++|.|| +|++.|++||||+++||+|.+|.. |..+.++.|||++|+ ++...
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~-~~c~~~~~y~~~~Ss-~~~~~-------------------- 68 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPA-SQQSGHSVYNPSATG-KELSG-------------------- 68 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCH-HHHTTSCCBCHHHHC-EEEEE--------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCc-hhccCCCCCCcccCC-cccCC--------------------
Confidence 468899999999 899999999999999999999953 655666899999998 65432
Q ss_pred CCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCCCC---CCcceeeecCCCCCch---------hhhh
Q 011600 216 SSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLF---GGAAGLMGLGRDPISL---------VSQT 283 (481)
Q Consensus 216 ~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g~~---~~~~GilGLg~~~~Sl---------~sQ~ 283 (481)
|.|.+.|+||+.+.|.+++|+|+|++ ..++++.|||++...+.+ ...+||||||++.++. ..|+
T Consensus 69 ---~~~~i~Yg~Gs~~~G~~~~D~v~ig~-~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 144 (323)
T 1bxo_A 69 ---YTWSISYGDGSSASGNVFTDSVTVGG-VTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTV 144 (323)
T ss_dssp ---EEEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred ---CeEEEEeCCCCeEEEEEEEEEEEECC-EEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHH
Confidence 79999999999889999999999998 689999999999876533 4689999999987654 3344
Q ss_pred hhhc-CCceEEeccCCCCCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEeeecccccccCCeEE
Q 011600 284 ATKY-KKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTII 358 (481)
Q Consensus 284 ~~~~-~~~FS~cL~~~~~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~ii 358 (481)
..+. .++||+||.+. ..|.|+|||+|+ +++.|+|+... ..+|.|+|++|+|++ +. ... ..+||
T Consensus 145 ~~~i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~--~~--~~~---~~aii 212 (323)
T 1bxo_A 145 KSSLAQPLFAVALKHQ--QPGVYDFGFIDSSKYTGSLTYTGVDNS---QGFWSFNVDSYTAGS--QS--GDG---FSGIA 212 (323)
T ss_dssp GGGBSSSEEEEECCSS--SCEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEEEEEEETT--EE--EEE---EEEEE
T ss_pred HHhcCCcEEEEEEeCC--CCceEEEeCcChhhccCceEEEECCCC---CCeEEEEEeeEEECC--cc--CCC---ceEEE
Confidence 4332 68999999863 479999999874 78999999752 578999999999999 21 121 45999
Q ss_pred eccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCeEEEECCCCcEEEeC-CCc
Q 011600 359 DSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTGIMYASN-ISQ 437 (481)
Q Consensus 359 DSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~l~~~~~l~~~~-~~~ 437 (481)
||||++++||+++|++|.+++.... +....+. |.++|. ..+|+|+|+| ||++++|++++|++... .+.
T Consensus 213 DSGTs~~~lP~~~~~~l~~~i~~a~--~~~~~g~------~~~~C~--~~~P~i~f~f-gg~~~~l~~~~~~~~~~~~~~ 281 (323)
T 1bxo_A 213 DTGTTLLLLDDSVVSQYYSQVSGAQ--QDSNAGG------YVFDCS--TNLPDFSVSI-SGYTATVPGSLINYGPSGDGS 281 (323)
T ss_dssp CTTCSSEEECHHHHHHHHTTSTTCE--EETTTTE------EEECTT--CCCCCEEEEE-TTEEEEECHHHHEEEECSSSS
T ss_pred eCCCCceeCCHHHHHHHHHhCCCce--EcCcCCE------EEEECC--CCCceEEEEE-CCEEEEECHHHeEEeccCCCC
Confidence 9999999999999999999984331 1111121 334454 3689999999 88999999999998763 347
Q ss_pred eEEE-EEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEeCC
Q 011600 438 VCLA-FAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 438 ~Cla-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~ 479 (481)
.|++ |.+.+ ..+.||||++|||++|+|||++++|||||++.
T Consensus 282 ~C~~~i~~~~-~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 282 TCLGGIQSNS-GIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp CEEESEEECT-TCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred eEEEEEECCC-CCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 8995 76653 34679999999999999999999999999874
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=2.9e-51 Score=415.70 Aligned_cols=296 Identities=24% Similarity=0.414 Sum_probs=240.0
Q ss_pred eeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcccccccCCCCCCCCCCCCccccccCCCccccccc
Q 011600 126 TLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQ 205 (481)
Q Consensus 126 ~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~~~ 205 (481)
++|+... +.+|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++..
T Consensus 4 ~~~l~n~----~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~~~~------------ 56 (340)
T 1wkr_A 4 SVPATNQ----LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSSATS------------ 56 (340)
T ss_dssp EEEEEEC----SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCEEEE------------
T ss_pred cEeeecc----CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCccccC------------
Confidence 4677642 468999999999999999999999999999764 4799998886432
Q ss_pred ccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCCCCCCcceeeecCCCCCch------
Q 011600 206 SATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLFGGAAGLMGLGRDPISL------ 279 (481)
Q Consensus 206 ~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g~~~~~~GilGLg~~~~Sl------ 279 (481)
|.|.+.|+||+ +.|.+++|+|+|++ ..++++.|||++...+ |...+||||||+..+++
T Consensus 57 -------------~~~~i~Yg~Gs-~~G~~~~Dtv~~g~-~~v~~~~fg~~~~~~~-~~~~~GilGLg~~~~s~~~~~~~ 120 (340)
T 1wkr_A 57 -------------DKVSVTYGSGS-FSGTEYTDTVTLGS-LTIPKQSIGVASRDSG-FDGVDGILGVGPVDLTVGTLSPH 120 (340)
T ss_dssp -------------EEEEEECSSCE-EEEEEEEEEEEETT-EEEEEEEEEEEEEEES-CTTCSEEEECSCGGGGTTSEESC
T ss_pred -------------ceEEEEECCcE-EEEEEEEEEEEECC-EEEcceEEEEEEccCC-CcCCCcEEECCcccccccccccc
Confidence 79999999997 89999999999998 6899999999999876 66799999999987664
Q ss_pred --------hhhhhhh---cCCceEEeccCCC---CCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEcc
Q 011600 280 --------VSQTATK---YKKLFSYCLPSSA---SSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGG 341 (481)
Q Consensus 280 --------~sQ~~~~---~~~~FS~cL~~~~---~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg 341 (481)
+.++..+ ..++||+||.+.. ...|.|+|||+|+ +++.|+|+..++....+|.|. ++|+|++
T Consensus 121 ~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~ 199 (340)
T 1wkr_A 121 TSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGS 199 (340)
T ss_dssp TTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETT
T ss_pred ccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECC
Confidence 3333332 1589999998642 2479999999874 689999998864446799999 9999998
Q ss_pred -EEeeecccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCCCCCCCCcccceeeccCCcccccCeEEEEEcCCe
Q 011600 342 -QKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGV 420 (481)
Q Consensus 342 -~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~ 420 (481)
+.+..+ +.+||||||++++||+++|++|.+++++... ... .+|.++|.....+|+|+|+| +|.
T Consensus 200 ~~~l~~~------~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~---~~~------g~~~~~C~~~~~~p~i~f~f-~g~ 263 (340)
T 1wkr_A 200 STSILSS------TAGIVDTGTTLTLIASDAFAKYKKATGAVAD---NNT------GLLRLTTAQYANLQSLFFTI-GGQ 263 (340)
T ss_dssp TEEEEEE------EEEEECTTBCSEEECHHHHHHHHHHHTCEEC---TTT------SSEEECHHHHHTCCCEEEEE-TTE
T ss_pred CeEccCC------CeEEEeCCcccccCCHHHHHHHHHhhCCEEc---CCC------CeEEeeccccccCCcEEEEE-CCE
Confidence 877522 3599999999999999999999998876532 111 13555665556789999999 789
Q ss_pred EEEECCCCcEEEeC-------CCceEE-EEEeCCC---CCCceeecHhhhceeEEEEECCCCEEEEEeCCCC
Q 011600 421 EVSVDKTGIMYASN-------ISQVCL-AFAGNSD---PTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 481 (481)
Q Consensus 421 ~~~l~~~~~l~~~~-------~~~~Cl-a~~~~~~---~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~~~C~ 481 (481)
++.|++++|+++.. ....|+ +|.+.+. .+..||||+.|||++|+|||++++|||||+++|+
T Consensus 264 ~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~ 335 (340)
T 1wkr_A 264 TFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFT 335 (340)
T ss_dssp EEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTT
T ss_pred EEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCC
Confidence 99999999998743 235676 6765321 2346999999999999999999999999999985
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.2e-41 Score=328.39 Aligned_cols=219 Identities=23% Similarity=0.429 Sum_probs=184.6
Q ss_pred eeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcc--cccccCCCCCCCCCCCCccccccCCCccccc
Q 011600 126 TLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV--KYCYEQKEPKFDPTVSQSYSNVSCSSTICTS 203 (481)
Q Consensus 126 ~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~--~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~~ 203 (481)
.+|+. +..+.+|+++|.||||+|++.|+|||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 4 ~~~l~---n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~--~~y~~~~SsT~~~~~-------- 70 (239)
T 1b5f_A 4 VVALT---NDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAH--SMYESSDSSTYKENG-------- 70 (239)
T ss_dssp EEEEE---EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTS--CCBCGGGCTTCEEEE--------
T ss_pred eeeee---ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCC--CCCCCccCCCeeeCC--------
Confidence 46665 345789999999999999999999999999999999994 358765 799999999998865
Q ss_pred ccccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCCCcccCceEEEEEEecCC-CC--CCcceeeecCCCCCchh
Q 011600 204 LQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRG-LF--GGAAGLMGLGRDPISLV 280 (481)
Q Consensus 204 ~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~FGc~~~~~g-~~--~~~~GilGLg~~~~Sl~ 280 (481)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||++...+ .| ...+||||||+..++.+
T Consensus 71 ---------------~~~~i~Yg~Gs-~~G~~~~D~v~~g~-~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p 133 (239)
T 1b5f_A 71 ---------------TFGAIIYGTGS-ITGFFSQDSVTIGD-LVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVP 133 (239)
T ss_dssp ---------------EEEEEECSSCE-EEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCC
T ss_pred ---------------cEEEEEECCCc-EEEEEEEEEEEECC-cEEccEEEEEEEeccCccccccCcceEEecCccccccH
Confidence 68999999997 78999999999998 6899999999998764 22 36899999999998722
Q ss_pred --hhhhhh---cCCceEEeccCCC--CCCceEEeCCCCC----CCceEeecccCCCCCccEEEEEeEEEEccEEeeeccc
Q 011600 281 --SQTATK---YKKLFSYCLPSSA--SSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAAS 349 (481)
Q Consensus 281 --sQ~~~~---~~~~FS~cL~~~~--~~~G~L~fGg~d~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~~ 349 (481)
.++..+ ..++||+||++.. ...|.|+||++|+ +++.|+|+.. ..+|.|+|++|+|+++.+.+...
T Consensus 134 ~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~~ 209 (239)
T 1b5f_A 134 VWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTY----QYYWQFGIGDVLIGDKSTGFCAP 209 (239)
T ss_dssp HHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEE----ETTEEEEECCEEETTEECCTTTT
T ss_pred HHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEccc----CCeEEEEeeEEEECCEEecccCC
Confidence 233322 2689999998753 3579999999885 5899999987 57999999999999998765443
Q ss_pred ccccCCeEEeccCceeecCHHHHHHHHHHHHH
Q 011600 350 VFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQ 381 (481)
Q Consensus 350 ~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~ 381 (481)
. .++||||||++++||+++|++|.+++++
T Consensus 210 ~---~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 210 G---CQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp C---EEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred C---CEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 2 4699999999999999999999998864
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=9.6e-35 Score=280.20 Aligned_cols=215 Identities=21% Similarity=0.330 Sum_probs=172.5
Q ss_pred cccCceEEEEEEecCC-CCC--CcceeeecCCCCCch------hhhhhhh---cCCceEEeccCCCCC--CceEEeCCCC
Q 011600 246 DVFPNFLFGCGQNNRG-LFG--GAAGLMGLGRDPISL------VSQTATK---YKKLFSYCLPSSASS--TGHLTFGPGA 311 (481)
Q Consensus 246 ~~~~~~~FGc~~~~~g-~~~--~~~GilGLg~~~~Sl------~sQ~~~~---~~~~FS~cL~~~~~~--~G~L~fGg~d 311 (481)
.+++++.|||++.+.+ .|. ..+||||||++.++. +.|+..+ ..++||+||.+.... .|+|+|||+|
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 4688999999999876 343 689999999987653 3455443 268999999986543 7999999998
Q ss_pred C----CCceEeecccCCCCCccEEEEEeEEEEccEEeeecccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhcCC
Q 011600 312 S----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYP 387 (481)
Q Consensus 312 ~----~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~ 387 (481)
+ +++.|+|+.. ..+|.|+|++|+|+++.+... .. ..+||||||++++||+++|++|.+++++...
T Consensus 83 ~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~-~~---~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~--- 151 (241)
T 1lya_B 83 SKYYKGSLSYLNVTR----KAYWQVHLDQVEVASGLTLCK-EG---CEAIVDTGTSLMVGPVDEVRELQKAIGAVPL--- 151 (241)
T ss_dssp GGGEEEEEEEEECSS----BTTBEEEEEEEEETTSCEEST-TC---EEEEECTTCSSEEECHHHHHHHHHHHTCEEE---
T ss_pred HHHcCCceEEEECcc----ccEEEEEEeEEEECCeeEecc-CC---CEEEEECCCccccCCHHHHHHHHHHhCCeec---
Confidence 5 5899999986 679999999999999875322 11 3599999999999999999999999876521
Q ss_pred CCCCCCcccceeeccCCcccccCeEEEEEcCCeEEEECCCCcEEEeCC--CceEE-EEEeCCC---CCCceeecHhhhce
Q 011600 388 TAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTGIMYASNI--SQVCL-AFAGNSD---PTDVSIFGNTQQHT 461 (481)
Q Consensus 388 ~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~l~~~~~l~~~~~--~~~Cl-a~~~~~~---~~~~~IlG~~fl~~ 461 (481)
. .+ .|.++|.....+|+|+|+| +|++++|++++|+++... +..|+ +|.+.+. ..+.||||++|||+
T Consensus 152 ~-~g------~~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~ 223 (241)
T 1lya_B 152 I-QG------EYMIPCEKVSTLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGR 223 (241)
T ss_dssp E-TT------EEEEEGGGGGGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHHTT
T ss_pred c-CC------cEEEECCCCccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHhcc
Confidence 1 11 2445565556799999999 789999999999998643 46899 5876531 34689999999999
Q ss_pred eEEEEECCCCEEEEEeCC
Q 011600 462 LEVVYDVAGGKVGFAAGG 479 (481)
Q Consensus 462 ~~vvfD~~~~rIGFa~~~ 479 (481)
+|+|||++++|||||+++
T Consensus 224 ~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 224 YYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp EEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCEEEEEEcC
Confidence 999999999999999864
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.88 E-value=6.9e-23 Score=168.99 Aligned_cols=90 Identities=27% Similarity=0.530 Sum_probs=80.4
Q ss_pred eeccccCCccCceeEEEEEEecCCCceEEEEEEcCCCceeEeCCCcc---cccccCCCCCCCCCCCCccccccCCCcccc
Q 011600 126 TLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV---KYCYEQKEPKFDPTVSQSYSNVSCSSTICT 202 (481)
Q Consensus 126 ~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~C~---~~C~~~~~~~f~ps~SsT~~~~~C~s~~C~ 202 (481)
.+|+. +..+.+|+++|.||||||++.|+|||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 4 ~~~l~---n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~--~~y~p~~SsT~~~~~------- 71 (97)
T 1lya_A 4 PEVLK---NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIH--HKYNSDKSSTYVKNG------- 71 (97)
T ss_dssp EEEEE---EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTS--CCBCGGGCTTCEEEE-------
T ss_pred eEeeE---ECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCC--CCCCchhCCCceeCC-------
Confidence 45665 345789999999999999999999999999999999996 369765 899999999999875
Q ss_pred cccccCCCCCCCCCCCceeeEEcCCCCeEEEEEEEEEEEeCC
Q 011600 203 SLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTP 244 (481)
Q Consensus 203 ~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~ 244 (481)
|.|.+.|++|+ +.|.+++|+|+|++
T Consensus 72 ----------------~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 ----------------TSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp ----------------EEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred ----------------CcEEEEECCcE-EEEEEEEEEEEECC
Confidence 79999999998 89999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.62 E-value=6.8e-16 Score=124.50 Aligned_cols=80 Identities=18% Similarity=0.325 Sum_probs=66.6
Q ss_pred eeccCCcccccCeEEEEEcCCeEEEECCCCcEEEeCC--CceEE-EEEeCC--CCCCceeecHhhhceeEEEEECCCCEE
Q 011600 399 YDFSKYSTVTLPQISLFFSGGVEVSVDKTGIMYASNI--SQVCL-AFAGNS--DPTDVSIFGNTQQHTLEVVYDVAGGKV 473 (481)
Q Consensus 399 y~~~~~~~~~~P~i~f~f~gg~~~~l~~~~~l~~~~~--~~~Cl-a~~~~~--~~~~~~IlG~~fl~~~~vvfD~~~~rI 473 (481)
|.++|.....+|+|+|+| ||++++|++++|+++... ...|+ +|++.+ ...+.||||++|||++|+|||++++||
T Consensus 3 y~v~C~~~~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~ri 81 (87)
T 1b5f_B 3 LQVDCNTLSSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLV 81 (87)
T ss_dssp CEECGGGGGGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEE
T ss_pred EEEECCCCCcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEE
Confidence 455666666899999999 789999999999988643 36899 687653 234589999999999999999999999
Q ss_pred EEEeCC
Q 011600 474 GFAAGG 479 (481)
Q Consensus 474 GFa~~~ 479 (481)
|||++.
T Consensus 82 GfA~~~ 87 (87)
T 1b5f_B 82 GFAEAA 87 (87)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999863
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=89.81 E-value=0.7 Score=39.61 Aligned_cols=108 Identities=9% Similarity=0.096 Sum_probs=59.8
Q ss_pred ccEEEEEeEEEEccEEeeecccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhc-CC-CCCCCCcccceeeccCCc
Q 011600 328 SFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSK-YP-TAPALSLLDTCYDFSKYS 405 (481)
Q Consensus 328 ~~y~V~l~gIsVgg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~-~~-~~~~~~~~~~Cy~~~~~~ 405 (481)
..++|+ +.|+|+.+. ++||||.+.+.++++..+.+--. ..... .. .+.+.... .+
T Consensus 25 ~~~~v~---v~InG~~~~----------~LvDTGAs~s~is~~~a~~lgl~--~~~~~~~~~~a~g~g~~-~~------- 81 (148)
T 2i1a_A 25 PMLYIN---IEINNYPVK----------AFVDTGAQTTIMSTRLAKKTGLS--RMIDKRFIGEARGVGTG-KI------- 81 (148)
T ss_dssp CCCEEE---EEETTEEEE----------EEECTTCSSCEEEHHHHHHHTGG--GGCBCCCC-------------------
T ss_pred ceEEEE---EEECCEEEE----------EEEECCCCccccCHHHHHHcCCC--ccCCcceEEEEecCCCc-cc-------
Confidence 445555 678888543 99999999999998776654211 11000 00 00110000 00
Q ss_pred ccccCeEEEEEcCCeEEEECCCCcEEEeCCCceEEEEEeCCCCCCceeecHhhhceeEEEEECCCCEEEEE
Q 011600 406 TVTLPQISLFFSGGVEVSVDKTGIMYASNISQVCLAFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFA 476 (481)
Q Consensus 406 ~~~~P~i~f~f~gg~~~~l~~~~~l~~~~~~~~Cla~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa 476 (481)
........+.+ |+..+.++ +.+.+. ....|||..||+.+.+..|+++++|-|.
T Consensus 82 ~~~~~~~~i~i-g~~~~~~~--------------~~vl~~---~~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 82 IGRIHQAQVKI-ETQYIPCS--------------FTVLDT---DIDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp CEEEEEEEEEE-TTEEEEEE--------------EEEECS---SCSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred ccEEEEEEEEE-CCEEecee--------------EEEecC---CCCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 01122335556 55443211 112221 1247999999999999999999999885
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=89.03 E-value=0.49 Score=40.98 Aligned_cols=109 Identities=11% Similarity=0.167 Sum_probs=62.4
Q ss_pred ccEEEEEeEEEEccEEeeecccccccCCeEEeccCceeecCHHHHHHHHHHHHHhhhc-CC-CCCCCCcccceeeccCCc
Q 011600 328 SFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSK-YP-TAPALSLLDTCYDFSKYS 405 (481)
Q Consensus 328 ~~y~V~l~gIsVgg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~-~~-~~~~~~~~~~Cy~~~~~~ 405 (481)
..++|+ +.|+|+++. +++|||.+.+.++.+..+.+-- ...... +. ...+.... .+
T Consensus 23 ~~l~v~---~~Ing~~v~----------~LVDTGAs~s~Is~~~A~rlGL--~~~~~~~~~~~a~g~G~~-~~------- 79 (148)
T 3s8i_A 23 TMLYIN---CKVNGHPLK----------AFVDSGAQMTIMSQACAERCNI--MRLVDRRWAGVAKGVGTQ-RI------- 79 (148)
T ss_dssp CCCEEE---EEETTEEEE----------EEECTTCSSCEEEHHHHHHTTC--GGGEEGGGCEECCC---C-EE-------
T ss_pred CEEEEE---EEECCEEEE----------EEEeCCCCcEeeCHHHHHHcCC--ccccCcceeEEEEcCCcc-EE-------
Confidence 345555 457888653 9999999999999988876521 100000 00 00000000 00
Q ss_pred ccccCeEEEEEcCCeEEEECCCCcEEEeCCCceEE-EEEeCCCCCCceeecHhhhceeEEEEECCCCEEEEEe
Q 011600 406 TVTLPQISLFFSGGVEVSVDKTGIMYASNISQVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAA 477 (481)
Q Consensus 406 ~~~~P~i~f~f~gg~~~~l~~~~~l~~~~~~~~Cl-a~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rIGFa~ 477 (481)
...++...+.+ |+..+ .|- .+.+. .....|||..+|+.+-.+.|+++++|-|..
T Consensus 80 ~g~v~~~~I~I-g~~~~---------------~~~~~Vle~--~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~ 134 (148)
T 3s8i_A 80 IGRVHLAQIQI-EGDFL---------------QCSFSILED--QPMDMLLGLDMLRRHQCSIDLKKNVLVIGT 134 (148)
T ss_dssp EEEEEEEEEEE-TTEEE---------------EEEEEEETT--CSSSEEECHHHHHHTTCEEETTTTEEECTT
T ss_pred EEEEEEEEEEE-CCEEE---------------EEEEEEeCC--CCcCeeccHHHHHhCCEEEEcCCCEEEEcc
Confidence 01233445555 44322 132 22222 223479999999999999999999998864
No 40
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=78.12 E-value=2 Score=34.76 Aligned_cols=25 Identities=28% Similarity=0.395 Sum_probs=22.9
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEe
Q 011600 141 IVTVGIGTPKKDLSLIFDTGSDLTWTQ 167 (481)
Q Consensus 141 ~~~i~iGTP~q~~~vivDTGS~~~Wv~ 167 (481)
++.|.|| .|.+.+++|||+|++-+.
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 5789999 799999999999999986
No 41
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=77.73 E-value=2 Score=34.38 Aligned_cols=28 Identities=32% Similarity=0.385 Sum_probs=24.2
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEeCCC
Q 011600 141 IVTVGIGTPKKDLSLIFDTGSDLTWTQCEP 170 (481)
Q Consensus 141 ~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~ 170 (481)
+++|.|| .|.+.+++|||.|++-+.-..
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~ 37 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEMS 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCCS
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEeccc
Confidence 4789999 799999999999999996543
No 42
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=73.87 E-value=2.8 Score=34.31 Aligned_cols=31 Identities=19% Similarity=0.383 Sum_probs=25.4
Q ss_pred EEEEEec---CCCceEEEEEEcCCCceeEeCCCc
Q 011600 141 IVTVGIG---TPKKDLSLIFDTGSDLTWTQCEPC 171 (481)
Q Consensus 141 ~~~i~iG---TP~q~~~vivDTGS~~~Wv~c~~C 171 (481)
.++|.|| +|+|.+..++|||.|+|-+.-..+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 4666666 889999999999999999976544
No 43
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=72.31 E-value=3.4 Score=33.08 Aligned_cols=28 Identities=25% Similarity=0.317 Sum_probs=24.0
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEeCCC
Q 011600 141 IVTVGIGTPKKDLSLIFDTGSDLTWTQCEP 170 (481)
Q Consensus 141 ~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~ 170 (481)
++++.|| .|.+.+++|||.|++-+.-..
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~~ 37 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGIE 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSCC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCcc
Confidence 4789999 799999999999999996443
No 44
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=68.87 E-value=4.2 Score=34.55 Aligned_cols=30 Identities=17% Similarity=0.219 Sum_probs=26.3
Q ss_pred CceeEEEEEEecCCCceEEEEEEcCCCceeEe
Q 011600 136 GAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQ 167 (481)
Q Consensus 136 ~~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~ 167 (481)
..+.+++++.|+ .+++.+++|||++.+-+.
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is 52 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMS 52 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccC
Confidence 356789999998 789999999999998885
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=66.43 E-value=4.9 Score=33.09 Aligned_cols=25 Identities=24% Similarity=0.434 Sum_probs=21.8
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEeC
Q 011600 141 IVTVGIGTPKKDLSLIFDTGSDLTWTQC 168 (481)
Q Consensus 141 ~~~i~iGTP~q~~~vivDTGS~~~Wv~c 168 (481)
++ |.|| .|.+.+++|||.|++-+.-
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEcc
Confidence 35 8999 7999999999999998864
No 46
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=61.74 E-value=7.6 Score=31.81 Aligned_cols=28 Identities=25% Similarity=0.343 Sum_probs=24.0
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEeCCC
Q 011600 141 IVTVGIGTPKKDLSLIFDTGSDLTWTQCEP 170 (481)
Q Consensus 141 ~~~i~iGTP~q~~~vivDTGS~~~Wv~c~~ 170 (481)
.+.+.|| .|.+.+++|||.|++-+.-..
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEeccc
Confidence 5778888 799999999999999997543
No 47
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=55.69 E-value=9.4 Score=32.74 Aligned_cols=30 Identities=13% Similarity=0.229 Sum_probs=25.8
Q ss_pred ceeEEEEEEecCCCceEEEEEEcCCCceeEeC
Q 011600 137 AGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQC 168 (481)
Q Consensus 137 ~~~Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c 168 (481)
...|++++.|. .+++.+++|||++.+-+.-
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~ 51 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQ 51 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCH
Confidence 34588999998 7999999999999999854
No 48
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=48.35 E-value=19 Score=28.18 Aligned_cols=40 Identities=25% Similarity=0.351 Sum_probs=26.6
Q ss_pred eecccCCCCCccEEEEEeEEEEccEEeeecccccccCCeEEeccCceeecCHH
Q 011600 318 TPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPD 370 (481)
Q Consensus 318 tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~ 370 (481)
.||... ....|.++ |.||. |+..|. ++||||+..+++|..
T Consensus 5 ~~l~n~--~~~~Y~~~---i~iGT-----P~Q~~~---v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 5 EVLKNY--MDAQYYGE---IGIGT-----PPQCFT---VVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEEE--TTTEEEEE---EEETT-----TTEEEE---EEEETTCCCEEEEBT
T ss_pred EeeEEC--CCCeEEEE---EEECC-----CCeEEE---EEEeCCCCceEEeEc
Confidence 555432 24567765 67773 344444 999999999999864
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=45.80 E-value=15 Score=30.51 Aligned_cols=22 Identities=23% Similarity=0.366 Sum_probs=18.1
Q ss_pred CceEEEEEEcCCCceeEeCCCc
Q 011600 150 KKDLSLIFDTGSDLTWTQCEPC 171 (481)
Q Consensus 150 ~q~~~vivDTGS~~~Wv~c~~C 171 (481)
.|.+.+++|||.|++-+.-...
T Consensus 29 gq~~eaLLDTGAD~TVl~~~~l 50 (124)
T 2rsp_A 29 SVYITALLDSGADITIISEEDW 50 (124)
T ss_dssp EEEEEEEECTTCSSCEEETTTS
T ss_pred CEEEEEEecCCCCcEEEecccC
Confidence 5778999999999999975433
No 50
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=45.67 E-value=18 Score=30.44 Aligned_cols=28 Identities=18% Similarity=0.340 Sum_probs=23.7
Q ss_pred EEEEEEecCCCceEEEEEEcCCCceeEeCC
Q 011600 140 YIVTVGIGTPKKDLSLIFDTGSDLTWTQCE 169 (481)
Q Consensus 140 Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c~ 169 (481)
-++.+.|+ .|.+.+++|||.+.+-+.-.
T Consensus 23 P~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 23 PRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 35778898 79999999999999998643
No 51
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=42.62 E-value=19 Score=32.51 Aligned_cols=27 Identities=33% Similarity=0.372 Sum_probs=23.6
Q ss_pred EEEEEEecCCCceEEEEEEcCCCceeEeC
Q 011600 140 YIVTVGIGTPKKDLSLIFDTGSDLTWTQC 168 (481)
Q Consensus 140 Y~~~i~iGTP~q~~~vivDTGS~~~Wv~c 168 (481)
-.+.|.|| .|.+.+++|||.|.+-+.-
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEec
Confidence 36889999 7999999999999998853
No 52
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=33.12 E-value=36 Score=32.60 Aligned_cols=40 Identities=18% Similarity=0.273 Sum_probs=27.4
Q ss_pred ceEeecccCCCCCccEEEEEeEEEEccEEeeecccccccCCeEEeccCceeecCHHH
Q 011600 315 VQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPDA 371 (481)
Q Consensus 315 ~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~~ 371 (481)
+..+|+.. ...|.++ |+||.++ |. ++||||++.+++|..-
T Consensus 6 v~~~~~~~----~~~Y~~~---i~iG~Q~-------~~---v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 6 ATNTPTAN----DEEYITP---VTIGGTT-------LN---LNFDTGSADLWVFSTE 45 (323)
T ss_dssp EEEEECGG----GSCEEEE---EEETTEE-------EE---EEEETTCCCEEECBTT
T ss_pred eeeeecCC----CCEEEEE---EEECCEE-------EE---EEEeCCCcceEEecCC
Confidence 34455543 4567765 7788433 33 9999999999999754
No 53
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=31.87 E-value=39 Score=32.39 Aligned_cols=41 Identities=20% Similarity=0.234 Sum_probs=27.7
Q ss_pred ceEeecccCCCCCccEEEEEeEEEEccEEeeecccccccCCeEEeccCceeecCHHHH
Q 011600 315 VQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPDAY 372 (481)
Q Consensus 315 ~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~~y 372 (481)
+.-+|+.. ...|.++ |+||.++ |. ++||||++.+++|..-.
T Consensus 6 v~~~~~~~----~~~Y~~~---i~iG~q~-------~~---v~~DTGSs~lWv~~~~C 46 (323)
T 1izd_A 6 VTTNPTSN----DEEYITQ---VTVGDDT-------LG---LDFDTGSADLWVFSSQT 46 (323)
T ss_dssp EEEEECGG----GCCEEEE---EEETTEE-------EE---EEEETTCCCEEECBTTS
T ss_pred eeeeEcCC----CCEEEEE---EEECCEE-------EE---EEEcCCCcceEEecCCC
Confidence 34455543 4567765 7788333 33 99999999999997543
No 54
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=30.83 E-value=39 Score=32.42 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=24.1
Q ss_pred CccEEEEEeEEEEccEEeeecccccccCCeEEeccCceeecCHHHH
Q 011600 327 SSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPDAY 372 (481)
Q Consensus 327 ~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~~y 372 (481)
...|.++ |+||.++ |. ++||||++.+++|..-.
T Consensus 13 ~~~Y~~~---i~iG~Q~-------~~---v~~DTGSs~lWv~~~~C 45 (325)
T 1ibq_A 13 DEEYLTP---VTVGKST-------LH---LDFDTGSADLWVFSDEL 45 (325)
T ss_dssp TSCEEEE---EEEBTEE-------EE---EEEETTCCCEEEECTTS
T ss_pred CCEEEEE---EEECCEE-------EE---EEEeCCCccceEeeCCC
Confidence 5667765 7788433 33 99999999999986543
No 55
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=25.92 E-value=65 Score=31.23 Aligned_cols=45 Identities=24% Similarity=0.367 Sum_probs=30.6
Q ss_pred CCceEeecccCCCCCccEEEEEeEEEEccEEeeecccccccCCeEEeccCceeecCHH
Q 011600 313 KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPD 370 (481)
Q Consensus 313 ~~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~ 370 (481)
+.+...|+.... ...|.++ |.||. |+..|. ++||||++.+++|..
T Consensus 5 g~~~~~~l~~~~--~~~Y~~~---i~iGt-----P~q~~~---v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 5 GSVDTPGLYDFD--LEEYAIP---VSIGT-----PGQDFY---LLFDTGSSDTWVPHK 49 (361)
T ss_dssp CCEEEEEEEETT--TTEEEEE---EEETT-----TTEEEE---EEEETTCCCCEEEBT
T ss_pred CccceEEeecCC--CCEEEEE---EEECC-----CCcEEE---EEEcCCCCCeEECCC
Confidence 456667776522 4567765 67773 333343 999999999999864
No 56
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=24.66 E-value=58 Score=29.34 Aligned_cols=27 Identities=33% Similarity=0.375 Sum_probs=23.5
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEeCC
Q 011600 141 IVTVGIGTPKKDLSLIFDTGSDLTWTQCE 169 (481)
Q Consensus 141 ~~~i~iGTP~q~~~vivDTGS~~~Wv~c~ 169 (481)
.+++.|| .|.+.+++|||.|++-+.-.
T Consensus 114 ~~~iki~--Gq~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 114 LVTIRIG--GQLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred cEEEEEC--CEEEeeeecccCCceeeecc
Confidence 5889999 69999999999999998543
No 57
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=23.75 E-value=47 Score=31.74 Aligned_cols=43 Identities=28% Similarity=0.346 Sum_probs=28.7
Q ss_pred ceEeecccCCCCCccEEEEEeEEEEccEEeeecccccccCCeEEeccCceeecCHH
Q 011600 315 VQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPD 370 (481)
Q Consensus 315 ~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~ 370 (481)
+...||.... ...|.++ |.||. |+..|. ++||||++.+++|..
T Consensus 3 ~~~~~l~n~~--~~~Y~~~---i~iGt-----P~q~~~---v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 3 VASVPLTNYL--DSQYFGK---IYLGT-----PPQEFT---VLFDTGSSDFWVPSI 45 (323)
T ss_dssp CEEEEEEEET--TTEEEEE---EEETT-----TTEEEE---EEEETTCCCEEEEBT
T ss_pred cceeeeEecc--CCEEEEE---EEECC-----CCeEEE---EEEeCCccceEEcCC
Confidence 4456665422 4567765 67774 334444 999999999999864
No 58
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=22.76 E-value=58 Score=32.54 Aligned_cols=43 Identities=12% Similarity=0.064 Sum_probs=30.5
Q ss_pred ceEeecccCCCCCccEEEEEeEEEEccEEeeecccccccCCeEEeccCceeecCH
Q 011600 315 VQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPP 369 (481)
Q Consensus 315 ~~~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~ 369 (481)
-...|+..+.. ...|+++ |+||. |+..|. ++||||+.++|+|-
T Consensus 8 ~~~~pv~~d~~-~~~Y~~~---i~iGT-----Ppq~~~---v~~DTGS~~lWv~c 50 (413)
T 3vla_A 8 ALVVPVKKDAS-TLQYVTT---INQRT-----PLVSEN---LVVDLGGRFLWVDC 50 (413)
T ss_dssp EEEEEEEECTT-TCCEEEE---EEETT-----TTEEEE---EEEETTCSSEEEEC
T ss_pred cEEEEeeecCC-CCeEEEE---EEcCC-----CCcceE---EEEeCCChhhhccc
Confidence 34578877653 5567766 66664 444455 99999999999985
No 59
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=21.87 E-value=83 Score=30.01 Aligned_cols=33 Identities=15% Similarity=0.222 Sum_probs=23.6
Q ss_pred CccEEEEEeEEEEccEEeeecccccccCCeEEeccCceeecCHH
Q 011600 327 SSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPD 370 (481)
Q Consensus 327 ~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~ 370 (481)
...|.++ |+||. |+..|. ++||||++.+++|..
T Consensus 14 ~~~Y~~~---i~iGT-----P~q~~~---v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 14 DIEYYGQ---VTIGT-----PGKKFN---LDFDTGSSDLWIAST 46 (325)
T ss_dssp TTEEEEE---EEETT-----TTEEEE---EEEETTCCCCEEEBT
T ss_pred CCEEEEE---EEECC-----CCeEEE---EEEcCCCCCEEEccC
Confidence 5567765 67773 333344 999999999999864
No 60
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=21.82 E-value=49 Score=32.84 Aligned_cols=42 Identities=5% Similarity=0.005 Sum_probs=28.2
Q ss_pred EeecccCCCCCccEEEEEeEEEEccEEeeecccccccCCeEEeccCceeecCHH
Q 011600 317 FTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPD 370 (481)
Q Consensus 317 ~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~ 370 (481)
..|+..+. ....|+++ |.||. |+..|. ++||||++.+|+|-.
T Consensus 11 ~~pl~~~~-~~~~Y~~~---i~iGT-----P~Q~~~---v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 11 VLPVQNDG-STGLHWAN---LQKRT-----PLMQVP---VLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEEECT-TTCCEEEE---EEETT-----TTEEEE---EEEETTCSSEEEECS
T ss_pred EEeeecCC-CCceEEEE---EECCC-----CCceeE---EEEECCCCceeECCC
Confidence 46666432 24567765 66773 344444 999999999999854
No 61
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=20.81 E-value=74 Score=28.92 Aligned_cols=33 Identities=30% Similarity=0.520 Sum_probs=23.5
Q ss_pred CccEEEEEeEEEEccEEeeecccccccCCeEEeccCceeecCHH
Q 011600 327 SSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPD 370 (481)
Q Consensus 327 ~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~ 370 (481)
...|.++ |.||. |+..|. ++||||++.+++|..
T Consensus 12 ~~~Y~~~---i~iGt-----P~q~~~---v~~DTGSs~lWv~~~ 44 (239)
T 1b5f_A 12 DTSYFGE---IGIGT-----PPQKFT---VIFDTGSSVLWVPSS 44 (239)
T ss_dssp TTEEEEE---EEETT-----TTEEEE---EEEETTCCCEEEEBT
T ss_pred CCEEEEE---EEECC-----CCeEEE---EEEeCCCcceEEEcC
Confidence 4567665 66773 333344 999999999999854
No 62
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=20.73 E-value=85 Score=30.01 Aligned_cols=33 Identities=15% Similarity=0.193 Sum_probs=23.8
Q ss_pred CccEEEEEeEEEEccEEeeecccccccCCeEEeccCceeecCHH
Q 011600 327 SSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPD 370 (481)
Q Consensus 327 ~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~~ 370 (481)
...|.++ |.||. |+..|. ++||||++.+++|..
T Consensus 14 ~~~Y~~~---i~iGT-----P~Q~~~---v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 14 DDAYITP---VQIGT-----PAQTLN---LDFDTGSSDLWVFSS 46 (329)
T ss_dssp CCCEEEE---EEETT-----TTEEEE---EEEETTCCCEEECBT
T ss_pred CCEEEEE---EEECC-----CCeEEE---EEECCCCCCeEEecC
Confidence 4567665 77773 333344 999999999999864
No 63
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=20.54 E-value=90 Score=29.90 Aligned_cols=39 Identities=23% Similarity=0.404 Sum_probs=26.3
Q ss_pred EeecccCCCCCccEEEEEeEEEEccEEeeecccccccCCeEEeccCceeecCH
Q 011600 317 FTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPP 369 (481)
Q Consensus 317 ~tpl~~~~~~~~~y~V~l~gIsVgg~~l~~~~~~f~~~~~iiDSGT~~t~Lp~ 369 (481)
..|+... ...|.++ |+||. |+..|. ++||||++.++++.
T Consensus 4 ~~~l~n~---~~~Y~~~---i~iGT-----P~q~~~---v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 4 SVPATNQ---LVDYVVN---VGVGS-----PATTYS---LLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEEEEC---SSCEEEE---EEETT-----TTEEEE---EEEETTCCCCEECS
T ss_pred cEeeecc---CcEEEEE---EEECC-----CCcEEE---EEEeCCChhheecC
Confidence 3455542 3467765 67773 333344 99999999999985
Done!