Query 011607
Match_columns 481
No_of_seqs 266 out of 825
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 03:14:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011607.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011607hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2458 Endoplasmic reticulum 100.0 4E-128 8E-133 987.8 33.9 430 43-479 94-528 (528)
2 PF05686 Glyco_transf_90: Glyc 100.0 3E-116 6E-121 918.3 35.1 395 76-471 1-395 (395)
3 smart00672 CAP10 Putative lipo 100.0 2E-69 4.3E-74 535.4 21.1 250 152-401 1-256 (256)
4 PF13524 Glyco_trans_1_2: Glyc 97.8 0.00014 3E-09 60.3 8.5 82 300-387 9-90 (92)
5 PRK10307 putative glycosyl tra 69.4 26 0.00057 36.5 9.3 84 303-393 321-407 (412)
6 cd03801 GT1_YqgM_like This fam 67.5 32 0.00069 33.2 8.9 85 301-389 287-371 (374)
7 COG4641 Uncharacterized protei 66.2 27 0.00058 37.0 8.3 73 301-379 275-347 (373)
8 PRK15427 colanic acid biosynth 64.2 38 0.00081 35.8 9.3 87 302-392 317-404 (406)
9 cd04962 GT1_like_5 This family 63.0 38 0.00081 34.1 8.7 83 306-392 287-369 (371)
10 cd03808 GT1_cap1E_like This fa 58.0 54 0.0012 31.7 8.6 81 301-385 275-355 (359)
11 TIGR02149 glgA_Coryne glycogen 56.3 55 0.0012 33.3 8.7 78 307-387 298-380 (388)
12 cd05844 GT1_like_7 Glycosyltra 56.0 44 0.00095 33.5 7.8 82 302-387 283-364 (367)
13 TIGR02472 sucr_P_syn_N sucrose 55.4 39 0.00085 35.9 7.6 81 306-391 357-438 (439)
14 TIGR03087 stp1 sugar transfera 55.2 53 0.0011 34.1 8.5 83 301-391 310-394 (397)
15 cd03794 GT1_wbuB_like This fam 54.7 46 0.00099 32.6 7.5 80 302-385 312-391 (394)
16 TIGR03088 stp2 sugar transfera 54.4 83 0.0018 32.0 9.6 86 302-391 285-370 (374)
17 cd03822 GT1_ecORF704_like This 53.7 75 0.0016 31.3 8.9 79 301-385 281-359 (366)
18 PF00534 Glycos_transf_1: Glyc 52.6 47 0.001 29.6 6.7 69 301-373 104-172 (172)
19 cd03795 GT1_like_4 This family 52.5 44 0.00096 33.1 7.1 76 304-383 280-356 (357)
20 cd03817 GT1_UGDG_like This fam 51.1 81 0.0018 30.8 8.7 72 302-378 291-362 (374)
21 cd03807 GT1_WbnK_like This fam 50.2 1.1E+02 0.0023 29.8 9.3 78 301-385 280-358 (365)
22 PF07436 Curto_V3: Curtovirus 49.7 8.2 0.00018 31.6 1.0 24 3-26 10-33 (87)
23 cd03825 GT1_wcfI_like This fam 49.2 94 0.002 30.8 8.9 80 302-386 277-357 (365)
24 PRK15484 lipopolysaccharide 1, 47.0 84 0.0018 32.7 8.4 82 306-394 294-378 (380)
25 cd03818 GT1_ExpC_like This fam 46.4 1.1E+02 0.0024 31.7 9.1 75 305-383 316-390 (396)
26 cd03799 GT1_amsK_like This is 45.4 75 0.0016 31.4 7.4 79 302-384 274-352 (355)
27 cd04955 GT1_like_6 This family 42.8 88 0.0019 31.1 7.5 81 302-390 281-361 (363)
28 PRK05749 3-deoxy-D-manno-octul 41.1 57 0.0012 34.3 6.1 68 306-377 337-406 (425)
29 cd03805 GT1_ALG2_like This fam 40.3 71 0.0015 32.5 6.5 80 298-384 310-389 (392)
30 cd03792 GT1_Trehalose_phosphor 39.7 1.3E+02 0.0028 30.7 8.4 81 305-391 289-369 (372)
31 cd03798 GT1_wlbH_like This fam 34.0 1.8E+02 0.0039 28.1 8.0 86 301-392 290-375 (377)
32 PF03016 Exostosin: Exostosin 34.0 1.1E+02 0.0024 30.3 6.6 104 227-338 174-284 (302)
33 cd03823 GT1_ExpE7_like This fa 32.2 2E+02 0.0043 28.0 8.0 72 301-376 275-346 (359)
34 cd03800 GT1_Sucrose_synthase T 30.0 1.7E+02 0.0037 29.5 7.3 77 306-386 319-395 (398)
35 cd03821 GT1_Bme6_like This fam 29.0 3.2E+02 0.0069 26.5 8.8 77 302-385 294-371 (375)
36 TIGR03449 mycothiol_MshA UDP-N 26.7 4.3E+02 0.0094 27.1 9.8 84 303-391 316-399 (405)
37 cd03813 GT1_like_3 This family 26.1 2.4E+02 0.0053 30.3 8.0 80 304-385 385-468 (475)
38 cd04946 GT1_AmsK_like This fam 25.4 2.9E+02 0.0062 29.0 8.2 81 302-385 323-403 (407)
39 PLN02871 UDP-sulfoquinovose:DA 25.0 2.5E+02 0.0053 30.1 7.7 30 347-376 388-417 (465)
40 cd03814 GT1_like_2 This family 24.5 3.7E+02 0.0081 26.1 8.5 78 302-384 279-356 (364)
41 cd03816 GT1_ALG1_like This fam 23.3 1.9E+02 0.0042 30.4 6.5 77 299-381 327-406 (415)
42 cd03796 GT1_PIG-A_like This fa 22.6 2.8E+02 0.0061 28.7 7.5 87 304-399 284-370 (398)
43 cd03819 GT1_WavL_like This fam 22.3 2.7E+02 0.0058 27.5 7.0 75 301-381 276-353 (355)
No 1
>KOG2458 consensus Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif [General function prediction only]
Probab=100.00 E-value=3.6e-128 Score=987.77 Aligned_cols=430 Identities=60% Similarity=1.158 Sum_probs=409.9
Q ss_pred cccccC---C-CCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCcchhhHHhcccccccCCCCHHHHHHHhhcCcEEEEEE
Q 011607 43 TPLNCV---K-NQTQTCPTNYPKTSQTQESISDYSIPPTSTCPDYFRWIHEDLSPWKVTGITRDMLERANQTAHFRLILV 118 (481)
Q Consensus 43 ~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cp~~f~~I~~DL~pw~~~GIt~~~le~a~~~~~~rv~I~ 118 (481)
+.|.|+ + +.+++||++.....+ ++..++...+..+|||||+|||+||.||+++|||++++++|++.+++|++|+
T Consensus 94 ~~l~cs~~s~~~~~~~~p~~~~~~s~--~~~~~~~~~~~~tCPDyfrWIheDL~Pw~etgItre~~erak~~a~fr~vI~ 171 (528)
T KOG2458|consen 94 YRLYCSLFSGLKREVLCPSSHVSKSP--YILKNPVYHESCTCPDYFRWIHEDLCPWRETGITREMAERAKRKAHFRLVIK 171 (528)
T ss_pred hhhhhhhhhcccccccccccccccCc--cccCCCCCCCCCCCCcHHHHHHHhcCccccccchHHHhhhhhcccceeeeee
Confidence 447883 2 667899997433311 2234466678899999999999999999999999999999999999999999
Q ss_pred CCEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCCeEEEeeCCCCccccccCCCCCCCCCCCCeeEeccCCCCCcccc
Q 011607 119 NNKVYIHKYKQSIQTRDVFTIWGILQLLRKYPGRLPDLELMFDCDDRPVIRSRDYSGPNNKGPPPLFRYSGDRWTMDIVF 198 (481)
Q Consensus 119 ~G~lyv~~~~~~~~tR~~~tl~~il~llr~~~~~LPDvef~~n~~D~P~v~~~~~~g~~~~~~~PlFs~ck~~~~~DIl~ 198 (481)
+|++||+.|++++|+|++||+|||+|||++|||+|||+||||||+|+|.|.+.+|+| + .+|+|||+||++.++.||+|
T Consensus 172 ~g~~yv~~Y~ks~qtrd~ft~wgilqLlr~ypgklPDlElmf~~~D~P~v~~~~~~~-~-~~ppPlF~yCg~~~s~DIVf 249 (528)
T KOG2458|consen 172 EGRLYVENYRKSIQTRDVFTIWGILQLLRTYPGKLPDLELMFNCGDWPLVRKKDFQG-T-PPPPPLFSYCGSSESLDIVF 249 (528)
T ss_pred cCceehhhhhhhhcccchHHHHHHHHHHHhcCCCCCCceeeeecCCccccchhhccC-C-CCCCCeEeecCCcccccccc
Confidence 999999999999999999999999999999999999999999999999999999987 3 48999999999999999999
Q ss_pred CCccccccccccccchHHHHHHHHccCCCCCCCCCCCeeEeeeCCCCc-cchHHHHhccccCCCCccccchhhhhhhhhc
Q 011607 199 PDWSFWGWAEINIKPWESLLRELKEGNNGRNWIDREPYAYWKGNPFVA-ETRRDLLTCNLSDKHDWNARLYVQDWILESK 277 (481)
Q Consensus 199 Pd~~fwgwpe~~i~~w~~~~~~l~~~~~~~pW~~K~~kafWRG~~t~~-~~R~~Lv~~~~s~~~~~~a~v~~~~w~~e~~ 277 (481)
|||+||||+|.||++|+.++.++.+|+...+|.+|.++|||||++++. +.|..|+.||++.-.+|+++++.|+|.+|.+
T Consensus 250 Pdwsfwgw~e~nik~w~~~~~~~~egn~~~~W~~r~~yAywrGnp~v~e~~rl~ll~cn~s~~~d~~~~~y~qdw~~E~~ 329 (528)
T KOG2458|consen 250 PDWSFWGWAEVNIKPWEKLLEDIVEGNKRPKWKNKNPYAYWRGNPSVAERLRLDLLSCNNSELVDANATLYFQDWSKESK 329 (528)
T ss_pred cCccccCChhhcccccchHHHHHHhhccCCCcccCCceeEecCCCCccccchhhhhhcCCchhhchhhhhHHHhhhhhhh
Confidence 999999999999999999999999999999999999999999999998 8999999999998889999999999999999
Q ss_pred cCCccCChhhhccccEEEeecCcccccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhch
Q 011607 278 RGFQQSNLASQCAHRYKIYIEGYAWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGN 357 (481)
Q Consensus 278 ~g~~~~~l~d~c~YKYli~idG~~~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~ 357 (481)
.||+.+.+++||+|||+|||||.+||+|+||||+|+||||++++.|+|||++.|+||+|||||+.+ |+||++||+|++
T Consensus 330 ~G~k~s~l~dqc~hrYkIyiEG~awsvs~kYilacDS~tL~v~p~YydfF~r~l~P~~HYwPIk~~--c~slkfaV~Wgn 407 (528)
T KOG2458|consen 330 LGFKQSNLFDQCKHRYKIYIEGTAWSVSEKYILACDSMTLKVKPEYYDFFYRGLQPWKHYWPIKSN--CRSLKFAVDWGN 407 (528)
T ss_pred ccccccchhhhcceeeEEEEeeeeeeeecceeeecceeEEeecchHHHHHhhcccchhcccccccc--hhHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999999999999999998 899999999999
Q ss_pred hcHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHhhcCCCCCCCCCeeeccccccccCCChhhhhhhhhcccCCC
Q 011607 358 THKQKAQEIGRAASNFIQEELKMEYVYDYMFHLLNEYAKLLKFKPVAPDGAVEVCSETMACNANGSHKKFMMESLVKGPS 437 (481)
Q Consensus 358 ~h~~~Aq~IA~~g~~fa~~~L~~~~~~~Y~~~LL~eYa~l~~~~P~~~~~a~e~c~~~~~c~~~g~~~~f~~~s~v~~~~ 437 (481)
+|+++||.||++|++|+++.|.|++|||||||||+|||+||+|||++|+||+|||+|+|+|+++|++|+||+||+|+ |+
T Consensus 408 ~h~~~Aq~Igk~gs~f~r~~L~m~~vYdYmfhllqeYakL~k~kpevp~~a~evc~~~m~cp~~g~~r~~m~~slv~-ps 486 (528)
T KOG2458|consen 408 NHDEEAQKIGKEGSEFARKNLKMDYVYDYMFHLLQEYAKLQKFKPEVPEGATEVCPETMACPEDGRERKFMDESLVM-PS 486 (528)
T ss_pred cChHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHhhcCCcCCCCccccCchhccCCccchhhhhhhhcccc-cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHhHHHHHHHHHHHHHHHhhh
Q 011607 438 ITNPCTLPPPYEPKVLGAFYRRKLNAILQVQKWEDRYWESLK 479 (481)
Q Consensus 438 ~~~pc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (481)
++.||.|||||++.+|+.|++||+++++|||+||++||++|+
T Consensus 487 ~~~pC~~p~p~~~~~l~~~~~~k~~~~~~ve~we~~y~~~~~ 528 (528)
T KOG2458|consen 487 DTAPCEMPPPYDPNELKEFLEKKESTTRQVEKWENKYWQKQN 528 (528)
T ss_pred ccCcccCCCCCCcHHHHHHHHHHHhHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999874
No 2
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=100.00 E-value=2.9e-116 Score=918.32 Aligned_cols=395 Identities=53% Similarity=1.022 Sum_probs=382.0
Q ss_pred CCCCCCcchhhHHhcccccccCCCCHHHHHHHhhcCcEEEEEECCEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCC
Q 011607 76 PTSTCPDYFRWIHEDLSPWKVTGITRDMLERANQTAHFRLILVNNKVYIHKYKQSIQTRDVFTIWGILQLLRKYPGRLPD 155 (481)
Q Consensus 76 ~~~~Cp~~f~~I~~DL~pw~~~GIt~~~le~a~~~~~~rv~I~~G~lyv~~~~~~~~tR~~~tl~~il~llr~~~~~LPD 155 (481)
++.+||+||+||++||+||+++|||+++|+++++.+++|++|+||+|||+.+++++++|++||+|+|++|++++|++|||
T Consensus 1 ~~~~cp~~f~~I~~dl~~w~~~gIt~~~l~~~~~~~~~r~~I~~g~lYv~~~~~~~~tR~~~t~~~l~~ll~~~p~~lPD 80 (395)
T PF05686_consen 1 SNSQCPDYFRQIHRDLAPWRETGITREMLDRARRRAMFRYVIKDGRLYVESYREMFQTRDMFTLWGLLQLLRRYPGRLPD 80 (395)
T ss_pred CCCCCCccHHHHHHHHHHhhcCCCCHHHHHHHHhcCceEEEEECCEEEEEecccccchhHHHHHHHHHHHHHhCcCCCCC
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeCCCCccccccCCCCCCCCCCCCeeEeccCCCCCccccCCccccccccccccchHHHHHHHHccCCCCCCCCCCC
Q 011607 156 LELMFDCDDRPVIRSRDYSGPNNKGPPPLFRYSGDRWTMDIVFPDWSFWGWAEINIKPWESLLRELKEGNNGRNWIDREP 235 (481)
Q Consensus 156 vef~~n~~D~P~v~~~~~~g~~~~~~~PlFs~ck~~~~~DIl~Pd~~fwgwpe~~i~~w~~~~~~l~~~~~~~pW~~K~~ 235 (481)
|||+||++|+|.+.+..+.|.+ .+++|||||||+.++.|||||||+|||||+++|++|+..+..+.+++..+||++|++
T Consensus 81 ~Ef~~n~~D~P~~~~~~~~~~~-~~~~Pifs~~~~~~~~DIl~Pd~~fwgw~e~~i~~w~~~~~~i~~~~~~~pW~~K~p 159 (395)
T PF05686_consen 81 VEFMFNCDDWPVVRKDDYQGPS-APPPPIFSYCKSSDTADILFPDFSFWGWPEINIGPWDEDRKDIKEGNERVPWEDKKP 159 (395)
T ss_pred eeEEeECCCCccccccccCCCC-cchhhheeeccccCcCccccCCccccccccccCCchHHHhhhhhccccCCChhhccc
Confidence 9999999999999988766543 378999999999999999999999999999999999999999999999999999999
Q ss_pred eeEeeeCCCCccchHHHHhccccCCCCccccchhhhhhhhhccCCccCChhhhccccEEEeecCcccccchHHHHhcCCe
Q 011607 236 YAYWKGNPFVAETRRDLLTCNLSDKHDWNARLYVQDWILESKRGFQQSNLASQCAHRYKIYIEGYAWSVSEKYILACDSM 315 (481)
Q Consensus 236 kafWRG~~t~~~~R~~Lv~~~~s~~~~~~a~v~~~~w~~e~~~g~~~~~l~d~c~YKYli~idG~~~S~Rlk~LL~~~Sv 315 (481)
+|||||+++++..|++|+.|+++++.+|+|+++.++|..+...+++.+++++||+|||+||+||++||+||||||+||||
T Consensus 160 ~afWRG~~~~~~~R~~L~~~~~~~~~~~~a~i~~~d~~~~~~~~~~~~~l~~~~~yKYli~idG~~~S~RlkylL~c~Sv 239 (395)
T PF05686_consen 160 KAFWRGSPTVAETRQRLVRCSRSHPDLWDARITKQDWDKEYKPGFKHVPLEDQCKYKYLIYIDGNAWSGRLKYLLACNSV 239 (395)
T ss_pred ceEECCCcCCCcchhHHHHHhccCCccceeeechhhhhhhccccccccCHHHHhhhheeecCCCceeehhHHHHHcCCce
Confidence 99999999988889999999988889999999999998877788889999999999999999999999999999999999
Q ss_pred eeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHH
Q 011607 316 TLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKMEYVYDYMFHLLNEYA 395 (481)
Q Consensus 316 Vlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~~~~~Y~~~LL~eYa 395 (481)
||++++.|+|||+++|+||+|||||+.+..|+||.++|+|+++||++||+||++|++|++++|++++++|||++||+|||
T Consensus 240 Vl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v~w~~~~~~~A~~IA~~g~~f~~~~L~~~~~~~Y~~~LL~eYa 319 (395)
T PF05686_consen 240 VLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKVEWLNAHDDEAQRIAENGQRFAREYLTMEDVYCYWRRLLLEYA 319 (395)
T ss_pred EEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHhhhcccChHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999955579999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCeeeccccccccCCChhhhhhhhhcccCCCCCCCCCCCCCCChHHHHHHHHHHhHHHHHHHHHH
Q 011607 396 KLLKFKPVAPDGAVEVCSETMACNANGSHKKFMMESLVKGPSITNPCTLPPPYEPKVLGAFYRRKLNAILQVQKWE 471 (481)
Q Consensus 396 ~l~~~~P~~~~~a~e~c~~~~~c~~~g~~~~f~~~s~v~~~~~~~pc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (481)
+|++|+|+++++++|||+|+|+|+++|.+|+||+||+|++|+++.||+|||||+|++|++|++||+|+++|||+||
T Consensus 320 ~l~~~~p~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (395)
T PF05686_consen 320 KLLRFKPTVPPGAEEVCPESMACPAEGRERKFMMESMVKSPSDTDPCTMPPPYDPEELKEFLERKENVIRQVEKWE 395 (395)
T ss_pred HHhCCCCcCCCCceEechhhcCCCcccchhhHHHHhhccCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999997
No 3
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=100.00 E-value=2e-69 Score=535.38 Aligned_cols=250 Identities=58% Similarity=1.097 Sum_probs=230.3
Q ss_pred CCCCeEEEeeCCCCccccccCCCCCCCCCCCCeeEeccCCCCCccccCCcccc-ccccccccchHHHHHHHHccCCCCCC
Q 011607 152 RLPDLELMFDCDDRPVIRSRDYSGPNNKGPPPLFRYSGDRWTMDIVFPDWSFW-GWAEINIKPWESLLRELKEGNNGRNW 230 (481)
Q Consensus 152 ~LPDvef~~n~~D~P~v~~~~~~g~~~~~~~PlFs~ck~~~~~DIl~Pd~~fw-gwpe~~i~~w~~~~~~l~~~~~~~pW 230 (481)
+|||+||+||++|+|.+.+..+.+.+..+++||||+||..++.|||||||+|| |||+.++++|+..+.++.+++..+||
T Consensus 1 ~lPD~ef~~n~~D~p~~~~~~~~~~~~~~~~Pifs~~k~~~~~DIl~P~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~pW 80 (256)
T smart00672 1 RVPDLELMFNCRDWPLINKKSFASYNQHAPPPLFSYCGSDEYLDIVFPDWSFWAGWPEVNGRPWDKDLMELEEGNKRTKW 80 (256)
T ss_pred CCCCeeeeeeCCCccccccCCCCCcccCCCCCeEEecCCCCCCceEecCHHHhCCCccccCcchHHHHHHHHhhhcCCCc
Confidence 58999999999999998876544332346899999999999999999999999 99999999999999999998999999
Q ss_pred CCCCCeeEeeeCCCCccchHHHHhccccCCCCccccchhhhhh-----hhhccCCccCChhhhccccEEEeecCcccccc
Q 011607 231 IDREPYAYWKGNPFVAETRRDLLTCNLSDKHDWNARLYVQDWI-----LESKRGFQQSNLASQCAHRYKIYIEGYAWSVS 305 (481)
Q Consensus 231 ~~K~~kafWRG~~t~~~~R~~Lv~~~~s~~~~~~a~v~~~~w~-----~e~~~g~~~~~l~d~c~YKYli~idG~~~S~R 305 (481)
++|+++|||||+++++.+|++|+++++.++.+|||+++.++|. .+...+++.+++++||+|||+|++||++||+|
T Consensus 81 ~~K~~~a~WRG~~~~~~~R~~Lv~~~~~~p~~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yKyli~~dG~~~S~r 160 (256)
T smart00672 81 SDKNAYAYWRGNPTVASERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEGVAWSVR 160 (256)
T ss_pred cccCcCccccCCCCCCcchHHHHHHhcCCcccceeEEEEecCCCCChHHhcccCcCCCCHHHHhhcceEEecCCccchhh
Confidence 9999999999999987799999999988888899999887774 23445667799999999999999999999999
Q ss_pred hHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchhHHHH
Q 011607 306 EKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKMEYVYD 385 (481)
Q Consensus 306 lk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~~~~~ 385 (481)
|+++|+||||||++++.|+|||+++|+||+|||||+.|..++||+++|+|+++||++||+||++|++|++++|++++++|
T Consensus 161 l~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYvPv~~d~sd~~l~~~i~~~~~~~~~a~~Ia~~~~~~~~~~L~~~~~~~ 240 (256)
T smart00672 161 LKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCRELKEAVDWGNEHDKKAQEIGKRGSEFIQQNLSMEDVYD 240 (256)
T ss_pred HHHHHhcCceEEEeCCchhHHHHhcccCccceEEeeCCCchhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 99999999999999999999999999999999999999822339999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCC
Q 011607 386 YMFHLLNEYAKLLKFK 401 (481)
Q Consensus 386 Y~~~LL~eYa~l~~~~ 401 (481)
||++||+|||+||+|+
T Consensus 241 Y~~~ll~eya~l~~~~ 256 (256)
T smart00672 241 YMFHLLQEYAKLLKYK 256 (256)
T ss_pred HHHHHHHHHHHHhccC
Confidence 9999999999999986
No 4
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=97.77 E-value=0.00014 Score=60.30 Aligned_cols=82 Identities=7% Similarity=0.043 Sum_probs=69.7
Q ss_pred cccccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhc
Q 011607 300 YAWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELK 379 (481)
Q Consensus 300 ~~~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~ 379 (481)
.+.+.|.--.|+||++||...+ .-+...+.++.|++-++ +. +|+.++++++.+||++.++||++|++++++..+
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~---~~~~~~~~~~~~~~~~~-~~--~el~~~i~~ll~~~~~~~~ia~~a~~~v~~~~t 82 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS---PGLREIFEDGEHIITYN-DP--EELAEKIEYLLENPEERRRIAKNARERVLKRHT 82 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh---HHHHHHcCCCCeEEEEC-CH--HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhCC
Confidence 4567788889999999998765 44455588899999998 44 899999999999999999999999999999988
Q ss_pred hhHHHHHH
Q 011607 380 MEYVYDYM 387 (481)
Q Consensus 380 ~~~~~~Y~ 387 (481)
-+.+..++
T Consensus 83 ~~~~~~~i 90 (92)
T PF13524_consen 83 WEHRAEQI 90 (92)
T ss_pred HHHHHHHH
Confidence 87776654
No 5
>PRK10307 putative glycosyl transferase; Provisional
Probab=69.40 E-value=26 Score=36.51 Aligned_cols=84 Identities=10% Similarity=0.078 Sum_probs=57.4
Q ss_pred ccchHHHHhcCCeeeeecCc---hhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhc
Q 011607 303 SVSEKYILACDSMTLLVKPY---FHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELK 379 (481)
Q Consensus 303 S~Rlk~LL~~~SvVlk~~s~---~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~ 379 (481)
...+--.|+|+-.|+..... ..|-. . ..-++ +..++ .++|.++|..+.++++..++++++|++++++.++
T Consensus 321 p~kl~eama~G~PVi~s~~~g~~~~~~i----~-~~G~~-~~~~d-~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs 393 (412)
T PRK10307 321 PSKLTNMLASGRNVVATAEPGTELGQLV----E-GIGVC-VEPES-VEALVAAIAALARQALLRPKLGTVAREYAERTLD 393 (412)
T ss_pred cHHHHHHHHcCCCEEEEeCCCchHHHHH----h-CCcEE-eCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcC
Confidence 33444558899888776432 22221 1 22222 22222 3789999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHH
Q 011607 380 MEYVYDYMFHLLNE 393 (481)
Q Consensus 380 ~~~~~~Y~~~LL~e 393 (481)
.+.+..-+..++.+
T Consensus 394 ~~~~~~~~~~~~~~ 407 (412)
T PRK10307 394 KENVLRQFIADIRG 407 (412)
T ss_pred HHHHHHHHHHHHHH
Confidence 88887766555543
No 6
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=67.54 E-value=32 Score=33.22 Aligned_cols=85 Identities=9% Similarity=-0.026 Sum_probs=59.5
Q ss_pred ccccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhch
Q 011607 301 AWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKM 380 (481)
Q Consensus 301 ~~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~ 380 (481)
+++..+---|+||-.|+.... ..+.+.+....+-+-+..++ .+++.+++..+..+++..+++++++++.+.+.++.
T Consensus 287 ~~~~~~~Ea~~~g~pvI~~~~---~~~~~~~~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03801 287 GFGLVLLEAMAAGLPVVASDV---GGIPEVVEDGETGLLVPPGD-PEALAEAILRLLDDPELRRRLGEAARERVAERFSW 362 (374)
T ss_pred cccchHHHHHHcCCcEEEeCC---CChhHHhcCCcceEEeCCCC-HHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhcCH
Confidence 455666667888988887663 22333344344434444432 37899999999999999999999999999898888
Q ss_pred hHHHHHHHH
Q 011607 381 EYVYDYMFH 389 (481)
Q Consensus 381 ~~~~~Y~~~ 389 (481)
+.+..=+..
T Consensus 363 ~~~~~~~~~ 371 (374)
T cd03801 363 DRVAARTEE 371 (374)
T ss_pred HHHHHHHHH
Confidence 776654433
No 7
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.18 E-value=27 Score=37.03 Aligned_cols=73 Identities=12% Similarity=0.177 Sum_probs=56.7
Q ss_pred ccccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhc
Q 011607 301 AWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELK 379 (481)
Q Consensus 301 ~~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~ 379 (481)
+.+-|.--+++|+-..+ |.|.+-....++|+.-.+--. |. .|+.++++++.+|++++++||+.|-+=+...-+
T Consensus 275 ~~~~RvFeiagc~~~li---T~~~~~~e~~f~pgk~~iv~~-d~--kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht 347 (373)
T COG4641 275 SPTNRVFEIAGCGGFLI---TDYWKDLEKFFKPGKDIIVYQ-DS--KDLKEKLKYLLNHPDERKEIAECAYERVLARHT 347 (373)
T ss_pred CchhhHHHHhhcCCccc---cccHHHHHHhcCCchheEEec-CH--HHHHHHHHHHhcCcchHHHHHHhhHHHHHHhcc
Confidence 34778888999998433 357777777778887776444 44 899999999999999999999999976654433
No 8
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=64.17 E-value=38 Score=35.84 Aligned_cols=87 Identities=8% Similarity=0.083 Sum_probs=62.0
Q ss_pred cccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchh-cHHHHHHHHHHHHHHHHHHhch
Q 011607 302 WSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNT-HKQKAQEIGRAASNFIQEELKM 380 (481)
Q Consensus 302 ~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~-h~~~Aq~IA~~g~~fa~~~L~~ 380 (481)
+...+---|+||-.|+..... -..+.+..+.+-+=+..++ .++|.++|..+.+ ++++.++++++|++++.+..+.
T Consensus 317 ~p~~llEAma~G~PVI~t~~~---g~~E~v~~~~~G~lv~~~d-~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~ 392 (406)
T PRK15427 317 IPVALMEAMAVGIPVVSTLHS---GIPELVEADKSGWLVPEND-AQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQ 392 (406)
T ss_pred ccHHHHHHHhCCCCEEEeCCC---CchhhhcCCCceEEeCCCC-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCH
Confidence 444556778999888765421 2234455555544444332 3789999998888 9999999999999999999998
Q ss_pred hHHHHHHHHHHH
Q 011607 381 EYVYDYMFHLLN 392 (481)
Q Consensus 381 ~~~~~Y~~~LL~ 392 (481)
+.+..=+..++.
T Consensus 393 ~~~~~~l~~~~~ 404 (406)
T PRK15427 393 QVINRELASLLQ 404 (406)
T ss_pred HHHHHHHHHHHh
Confidence 877776666554
No 9
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=63.04 E-value=38 Score=34.10 Aligned_cols=83 Identities=14% Similarity=-0.003 Sum_probs=58.5
Q ss_pred hHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchhHHHH
Q 011607 306 EKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKMEYVYD 385 (481)
Q Consensus 306 lk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~~~~~ 385 (481)
+---|+||-.|+..+.. -..+.+..+..-+=++.++ .+++..++..+.++++..++++++|++++.+..+.+.+..
T Consensus 287 ~~EAma~g~PvI~s~~~---~~~e~i~~~~~G~~~~~~~-~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~ 362 (371)
T cd04962 287 ALEAMACGVPVVASNAG---GIPEVVKHGETGFLVDVGD-VEAMAEYALSLLEDDELWQEFSRAARNRAAERFDSERIVP 362 (371)
T ss_pred HHHHHHcCCCEEEeCCC---CchhhhcCCCceEEcCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 45567888877765432 1334455554444344432 3788899988888999999999999999988899888776
Q ss_pred HHHHHHH
Q 011607 386 YMFHLLN 392 (481)
Q Consensus 386 Y~~~LL~ 392 (481)
-+..+++
T Consensus 363 ~~~~~y~ 369 (371)
T cd04962 363 QYEALYR 369 (371)
T ss_pred HHHHHHH
Confidence 6665554
No 10
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=58.01 E-value=54 Score=31.69 Aligned_cols=81 Identities=12% Similarity=0.003 Sum_probs=56.7
Q ss_pred ccccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhch
Q 011607 301 AWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKM 380 (481)
Q Consensus 301 ~~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~ 380 (481)
+++..+---|+||-.|+..... -..+.+....+=+-+..++ .+++.+++..+..+++..++++++|++++.+..+.
T Consensus 275 ~~~~~~~Ea~~~G~Pvi~s~~~---~~~~~i~~~~~g~~~~~~~-~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~ 350 (359)
T cd03808 275 GLPRVLLEAMAMGRPVIATDVP---GCREAVIDGVNGFLVPPGD-AEALADAIERLIEDPELRARMGQAARKRAEEEFDE 350 (359)
T ss_pred CcchHHHHHHHcCCCEEEecCC---CchhhhhcCcceEEECCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCH
Confidence 3455566778889877775432 1233344344444454432 37899999999999999999999999999888887
Q ss_pred hHHHH
Q 011607 381 EYVYD 385 (481)
Q Consensus 381 ~~~~~ 385 (481)
+.+..
T Consensus 351 ~~~~~ 355 (359)
T cd03808 351 EIVVK 355 (359)
T ss_pred HHHHH
Confidence 76654
No 11
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=56.30 E-value=55 Score=33.30 Aligned_cols=78 Identities=10% Similarity=0.034 Sum_probs=53.5
Q ss_pred HHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCC-----cccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchh
Q 011607 307 KYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDK-----CKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKME 381 (481)
Q Consensus 307 k~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~-----~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~ 381 (481)
---|+||-.|+..... -..+.+.....-+-+..++. ..+|.+++..+.+++++.++++++|++.+++..+.+
T Consensus 298 lEA~a~G~PvI~s~~~---~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~ 374 (388)
T TIGR02149 298 LEAMACGTPVVASATG---GIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIAGRKRAEEEFSWG 374 (388)
T ss_pred HHHHHcCCCEEEeCCC---CHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 4557888877765532 23334444444444444331 147888998888899999999999999999888887
Q ss_pred HHHHHH
Q 011607 382 YVYDYM 387 (481)
Q Consensus 382 ~~~~Y~ 387 (481)
.+..-+
T Consensus 375 ~~~~~~ 380 (388)
T TIGR02149 375 SIAKKT 380 (388)
T ss_pred HHHHHH
Confidence 766533
No 12
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=56.00 E-value=44 Score=33.54 Aligned_cols=82 Identities=9% Similarity=-0.023 Sum_probs=57.1
Q ss_pred cccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchh
Q 011607 302 WSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKME 381 (481)
Q Consensus 302 ~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~ 381 (481)
++..+---|+||-.|+..+.. -..+.+.....-+-+..++ .++|.+++..+.++++..++++++|++++.+.++.+
T Consensus 283 ~~~~~~EA~a~G~PvI~s~~~---~~~e~i~~~~~g~~~~~~d-~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~ 358 (367)
T cd05844 283 LPVVLLEAQASGVPVVATRHG---GIPEAVEDGETGLLVPEGD-VAALAAALGRLLADPDLRARMGAAGRRRVEERFDLR 358 (367)
T ss_pred CchHHHHHHHcCCCEEEeCCC---CchhheecCCeeEEECCCC-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHH
Confidence 444556678899888865532 1233444444444444332 378999998888899999999999999999998887
Q ss_pred HHHHHH
Q 011607 382 YVYDYM 387 (481)
Q Consensus 382 ~~~~Y~ 387 (481)
.+..-+
T Consensus 359 ~~~~~l 364 (367)
T cd05844 359 RQTAKL 364 (367)
T ss_pred HHHHHH
Confidence 766544
No 13
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=55.43 E-value=39 Score=35.93 Aligned_cols=81 Identities=12% Similarity=0.042 Sum_probs=55.3
Q ss_pred hHHHHhcCCeeeeecCc-hhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchhHHH
Q 011607 306 EKYILACDSMTLLVKPY-FHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKMEYVY 384 (481)
Q Consensus 306 lk~LL~~~SvVlk~~s~-~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~~~~ 384 (481)
.---|+|+-.|+..... ..|. +....+=+=+..++ .++|.++|..+.++++.+++++++|++++.+..+.+.+.
T Consensus 357 ~lEAma~G~PvV~s~~gg~~ei----v~~~~~G~lv~~~d-~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fsw~~~~ 431 (439)
T TIGR02472 357 LLEAAACGLPIVATDDGGPRDI----IANCRNGLLVDVLD-LEAIASALEDALSDSSQWQLWSRNGIEGVRRHYSWDAHV 431 (439)
T ss_pred HHHHHHhCCCEEEeCCCCcHHH----hcCCCcEEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 45668888877765432 3333 33333222222222 378999999999999999999999999999999888776
Q ss_pred HHHHHHH
Q 011607 385 DYMFHLL 391 (481)
Q Consensus 385 ~Y~~~LL 391 (481)
.-+..+|
T Consensus 432 ~~~~~l~ 438 (439)
T TIGR02472 432 EKYLRIL 438 (439)
T ss_pred HHHHHHh
Confidence 6555554
No 14
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=55.23 E-value=53 Score=34.13 Aligned_cols=83 Identities=11% Similarity=-0.022 Sum_probs=58.5
Q ss_pred ccccchHHHHhcCCeeeeecCchhhhhhhhc--cCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHh
Q 011607 301 AWSVSEKYILACDSMTLLVKPYFHDFFIRYL--QPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEEL 378 (481)
Q Consensus 301 ~~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L--~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L 378 (481)
+....+---|+||-.|+..... ...+ ....+++- ..|. +++.++|..+.++++..++++++|++++.+..
T Consensus 310 G~~~~~lEAma~G~PVV~t~~~-----~~~i~~~~~~g~lv-~~~~--~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~f 381 (397)
T TIGR03087 310 GIQNKVLEAMAMAKPVVASPEA-----AEGIDALPGAELLV-AADP--ADFAAAILALLANPAEREELGQAARRRVLQHY 381 (397)
T ss_pred CcccHHHHHHHcCCCEEecCcc-----cccccccCCcceEe-CCCH--HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhC
Confidence 3444455678899888876421 1122 34556653 3443 78999999999999999999999999999888
Q ss_pred chhHHHHHHHHHH
Q 011607 379 KMEYVYDYMFHLL 391 (481)
Q Consensus 379 ~~~~~~~Y~~~LL 391 (481)
+.+.+..-+..+|
T Consensus 382 sw~~~~~~~~~~l 394 (397)
T TIGR03087 382 HWPRNLARLDALL 394 (397)
T ss_pred CHHHHHHHHHHHh
Confidence 8777666555544
No 15
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=54.75 E-value=46 Score=32.64 Aligned_cols=80 Identities=10% Similarity=0.004 Sum_probs=53.0
Q ss_pred cccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchh
Q 011607 302 WSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKME 381 (481)
Q Consensus 302 ~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~ 381 (481)
.+..+---|+||-.|+...... ....+.....-+-+..++ .++|.++|.-+..+++..++++++|++++.+..+.+
T Consensus 312 ~p~~~~Ea~~~G~pvi~~~~~~---~~~~~~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 387 (394)
T cd03794 312 SPSKLFEYMAAGKPVLASVDGE---SAELVEEAGAGLVVPPGD-PEALAAAILELLDDPEERAEMGENGRRYVEEKFSRE 387 (394)
T ss_pred CchHHHHHHHCCCcEEEecCCC---chhhhccCCcceEeCCCC-HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhhcHH
Confidence 3444556788888777665332 122223322222233322 378999999888999999999999999999888877
Q ss_pred HHHH
Q 011607 382 YVYD 385 (481)
Q Consensus 382 ~~~~ 385 (481)
.+..
T Consensus 388 ~~~~ 391 (394)
T cd03794 388 KLAE 391 (394)
T ss_pred HHHH
Confidence 6654
No 16
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=54.44 E-value=83 Score=31.99 Aligned_cols=86 Identities=9% Similarity=-0.104 Sum_probs=57.2
Q ss_pred cccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchh
Q 011607 302 WSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKME 381 (481)
Q Consensus 302 ~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~ 381 (481)
++..+---|+||-.|+..+.. -..+.+....+=+-+..++ .+++.+++..+.++++..+.++++|++.+.+..+.+
T Consensus 285 ~~~~~lEAma~G~Pvv~s~~~---g~~e~i~~~~~g~~~~~~d-~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~ 360 (374)
T TIGR03088 285 ISNTILEAMASGLPVIATAVG---GNPELVQHGVTGALVPPGD-AVALARALQPYVSDPAARRAHGAAGRARAEQQFSIN 360 (374)
T ss_pred CchHHHHHHHcCCCEEEcCCC---CcHHHhcCCCceEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 344455668888877775421 1222333333323333332 378999999988999999999999999999999888
Q ss_pred HHHHHHHHHH
Q 011607 382 YVYDYMFHLL 391 (481)
Q Consensus 382 ~~~~Y~~~LL 391 (481)
.+..-+..+.
T Consensus 361 ~~~~~~~~~y 370 (374)
T TIGR03088 361 AMVAAYAGLY 370 (374)
T ss_pred HHHHHHHHHH
Confidence 7766554444
No 17
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=53.67 E-value=75 Score=31.27 Aligned_cols=79 Identities=11% Similarity=-0.008 Sum_probs=55.1
Q ss_pred ccccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhch
Q 011607 301 AWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKM 380 (481)
Q Consensus 301 ~~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~ 380 (481)
+++..+-.-|+||-.|+..+... .+.+.....-+-+..++ .+++.+++..+.++++..+++++++.+++++ ++.
T Consensus 281 ~~~~~~~Ea~a~G~PvI~~~~~~----~~~i~~~~~g~~~~~~d-~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~-~s~ 354 (366)
T cd03822 281 TQSGVLAYAIGFGKPVISTPVGH----AEEVLDGGTGLLVPPGD-PAALAEAIRRLLADPELAQALRARAREYARA-MSW 354 (366)
T ss_pred ccchHHHHHHHcCCCEEecCCCC----hheeeeCCCcEEEcCCC-HHHHHHHHHHHHcChHHHHHHHHHHHHHHhh-CCH
Confidence 56666667789999888765332 23333333333344332 3789999999999999999999999999987 777
Q ss_pred hHHHH
Q 011607 381 EYVYD 385 (481)
Q Consensus 381 ~~~~~ 385 (481)
+.+..
T Consensus 355 ~~~~~ 359 (366)
T cd03822 355 ERVAE 359 (366)
T ss_pred HHHHH
Confidence 66544
No 18
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=52.59 E-value=47 Score=29.63 Aligned_cols=69 Identities=12% Similarity=0.065 Sum_probs=48.5
Q ss_pred ccccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHH
Q 011607 301 AWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNF 373 (481)
Q Consensus 301 ~~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~f 373 (481)
+++..+---|+|+.+||... ...+.+.+.+..+-+-+.... ..++.++|.-+.++++..+.++++|++|
T Consensus 104 ~~~~~~~Ea~~~g~pvI~~~---~~~~~e~~~~~~~g~~~~~~~-~~~l~~~i~~~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 104 GFGLSLLEAMACGCPVIASD---IGGNNEIINDGVNGFLFDPND-IEELADAIEKLLNDPELRQKLGKNARER 172 (172)
T ss_dssp SS-HHHHHHHHTT-EEEEES---STHHHHHSGTTTSEEEESTTS-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccceeecc---ccCCceeeccccceEEeCCCC-HHHHHHHHHHHHCCHHHHHHHHHHhcCC
Confidence 45556667889999888765 344455566666444343332 3789999999999999999999999976
No 19
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=52.52 E-value=44 Score=33.09 Aligned_cols=76 Identities=11% Similarity=-0.027 Sum_probs=50.3
Q ss_pred cchHHHHhcCCeeeeecCc-hhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchhH
Q 011607 304 VSEKYILACDSMTLLVKPY-FHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKMEY 382 (481)
Q Consensus 304 ~Rlk~LL~~~SvVlk~~s~-~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~~ 382 (481)
..+---|+|+-.||..+.. ..+.... ....=.-+..++ .+++.++|..+.+++++.++++++|++++.++.+.+.
T Consensus 280 ~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~~~g~~~~~~d-~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~ 355 (357)
T cd03795 280 IVLLEAMAFGKPVISTEIGTGGSYVNL---HGVTGLVVPPGD-PAALAEAIRRLLEDPELRERLGEAARERAEEEFTADR 355 (357)
T ss_pred hHHHHHHHcCCCEEecCCCCchhHHhh---CCCceEEeCCCC-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHhcchHh
Confidence 3345567788877775532 2222211 122222233222 3789999999999999999999999999999888765
Q ss_pred H
Q 011607 383 V 383 (481)
Q Consensus 383 ~ 383 (481)
+
T Consensus 356 ~ 356 (357)
T cd03795 356 M 356 (357)
T ss_pred h
Confidence 4
No 20
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=51.06 E-value=81 Score=30.82 Aligned_cols=72 Identities=7% Similarity=-0.076 Sum_probs=53.4
Q ss_pred cccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHh
Q 011607 302 WSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEEL 378 (481)
Q Consensus 302 ~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L 378 (481)
++..+---|+||-.|+.... ....+.+....+-+-+..+. .++.+++..+.++++..+++++++++++.++.
T Consensus 291 ~~~~~~Ea~~~g~PvI~~~~---~~~~~~i~~~~~g~~~~~~~--~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 291 QGLVLLEAMAAGLPVVAVDA---PGLPDLVADGENGFLFPPGD--EALAEALLRLLQDPELRRRLSKNAEESAEKFS 362 (374)
T ss_pred cChHHHHHHHcCCcEEEeCC---CChhhheecCceeEEeCCCC--HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 44445566888888887653 23445556666666666554 38999999999999999999999999997765
No 21
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=50.16 E-value=1.1e+02 Score=29.75 Aligned_cols=78 Identities=14% Similarity=0.099 Sum_probs=53.8
Q ss_pred ccccchHHHHhcCCeeeeecCc-hhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhc
Q 011607 301 AWSVSEKYILACDSMTLLVKPY-FHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELK 379 (481)
Q Consensus 301 ~~S~Rlk~LL~~~SvVlk~~s~-~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~ 379 (481)
+++..+-=-|+||-.|+..... ..|+..+ .--+++.. + .+++.+++..+.+++++.+++++++.+++++..+
T Consensus 280 ~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~----~g~~~~~~-~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s 352 (365)
T cd03807 280 GFPNVLLEAMACGLPVVATDVGDNAELVGD----TGFLVPPG-D--PEALAEAIEALLADPALRQALGEAARERIEENFS 352 (365)
T ss_pred cCCcHHHHHHhcCCCEEEcCCCChHHHhhc----CCEEeCCC-C--HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCC
Confidence 3455566678888877765433 3333333 12222222 2 3789999999999999999999999999999888
Q ss_pred hhHHHH
Q 011607 380 MEYVYD 385 (481)
Q Consensus 380 ~~~~~~ 385 (481)
.+.+..
T Consensus 353 ~~~~~~ 358 (365)
T cd03807 353 IEAMVE 358 (365)
T ss_pred HHHHHH
Confidence 776554
No 22
>PF07436 Curto_V3: Curtovirus V3 protein; InterPro: IPR009997 This family consists of several Curtovirus V3 proteins of around 90 residues in length. The function of this family is unknown.
Probab=49.66 E-value=8.2 Score=31.58 Aligned_cols=24 Identities=33% Similarity=0.448 Sum_probs=19.8
Q ss_pred cchhhhhhhccCcceeeeecCCee
Q 011607 3 ELFAFSIILQSNFSVHNISRNKTV 26 (481)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~ 26 (481)
-||.|||||||+-.+-+.|-.+++
T Consensus 10 LlFifsillQsgtNfYGTfqSgsi 33 (87)
T PF07436_consen 10 LLFIFSILLQSGTNFYGTFQSGSI 33 (87)
T ss_pred HHHHHHHHHhcCCceeeeeccchH
Confidence 379999999999888888876653
No 23
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=49.24 E-value=94 Score=30.83 Aligned_cols=80 Identities=14% Similarity=0.198 Sum_probs=52.1
Q ss_pred cccchHHHHhcCCeeeeecCc-hhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhch
Q 011607 302 WSVSEKYILACDSMTLLVKPY-FHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKM 380 (481)
Q Consensus 302 ~S~Rlk~LL~~~SvVlk~~s~-~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~ 380 (481)
++..+---|+|+-.|+..... ..| .+.....=+-+..+. .+++.+++..+.++++..+++++++++++.+..+.
T Consensus 277 ~g~~~~Eam~~g~PvI~~~~~~~~e----~~~~~~~g~~~~~~~-~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~s~ 351 (365)
T cd03825 277 FPNTAIEALACGTPVVAFDVGGIPD----IVDHGVTGYLAKPGD-PEDLAEGIEWLLADPDEREELGEAARELAENEFDS 351 (365)
T ss_pred ccHHHHHHHhcCCCEEEecCCCChh----heeCCCceEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCH
Confidence 344455667888877765432 222 222222222333322 37899999988899999999999999999888876
Q ss_pred hHHHHH
Q 011607 381 EYVYDY 386 (481)
Q Consensus 381 ~~~~~Y 386 (481)
+.+..=
T Consensus 352 ~~~~~~ 357 (365)
T cd03825 352 RVQAKR 357 (365)
T ss_pred HHHHHH
Confidence 655443
No 24
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=47.03 E-value=84 Score=32.72 Aligned_cols=82 Identities=11% Similarity=0.031 Sum_probs=56.0
Q ss_pred hHHHHhcCCeeeeecCchhhhhhhhccCCce---eEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchhH
Q 011607 306 EKYILACDSMTLLVKPYFHDFFIRYLQPLRH---YWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKMEY 382 (481)
Q Consensus 306 lk~LL~~~SvVlk~~s~~~e~f~~~L~P~~H---YVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~~ 382 (481)
+---|+||-.|+..... -..+.+..+.+ .++ ..| .++|.+++..+.++++. ++++++|++.+.+..+.+.
T Consensus 294 ~lEAma~G~PVI~s~~g---g~~Eiv~~~~~G~~l~~-~~d--~~~la~~I~~ll~d~~~-~~~~~~ar~~~~~~fsw~~ 366 (380)
T PRK15484 294 AVEAMAAGKPVLASTKG---GITEFVLEGITGYHLAE-PMT--SDSIISDINRTLADPEL-TQIAEQAKDFVFSKYSWEG 366 (380)
T ss_pred HHHHHHcCCCEEEeCCC---CcHhhcccCCceEEEeC-CCC--HHHHHHHHHHHHcCHHH-HHHHHHHHHHHHHhCCHHH
Confidence 34557888877765431 12233334433 222 223 37899999998888875 7899999999999999888
Q ss_pred HHHHHHHHHHHH
Q 011607 383 VYDYMFHLLNEY 394 (481)
Q Consensus 383 ~~~Y~~~LL~eY 394 (481)
+..=+.++|..|
T Consensus 367 ~a~~~~~~l~~~ 378 (380)
T PRK15484 367 VTQRFEEQIHNW 378 (380)
T ss_pred HHHHHHHHHHHh
Confidence 887777777665
No 25
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=46.45 E-value=1.1e+02 Score=31.71 Aligned_cols=75 Identities=12% Similarity=-0.066 Sum_probs=53.0
Q ss_pred chHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchhHH
Q 011607 305 SEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKMEYV 383 (481)
Q Consensus 305 Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~~~ 383 (481)
.+---|+|+-.|+..... -..+.+....+=+-+..++ .++|.++|..+.++++..++++++|++.+.++.+.+.+
T Consensus 316 ~llEAmA~G~PVIas~~~---g~~e~i~~~~~G~lv~~~d-~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~~ 390 (396)
T cd03818 316 SLLEAMACGCLVVGSDTA---PVREVITDGENGLLVDFFD-PDALAAAVIELLDDPARRARLRRAARRTALRYDLLSVC 390 (396)
T ss_pred HHHHHHHCCCCEEEcCCC---CchhhcccCCceEEcCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHHH
Confidence 345668999988876532 2233444444444344322 37899999999999999999999999999988876644
No 26
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=45.38 E-value=75 Score=31.41 Aligned_cols=79 Identities=11% Similarity=0.013 Sum_probs=53.7
Q ss_pred cccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchh
Q 011607 302 WSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKME 381 (481)
Q Consensus 302 ~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~ 381 (481)
++..+---|+||-.|+..... ...+.+.....=+-+..++ .+++.++|..+.++++..++++++|++++.+..+.+
T Consensus 274 ~~~~~~Ea~a~G~Pvi~~~~~---~~~~~i~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~ 349 (355)
T cd03799 274 LPVVLMEAMAMGLPVISTDVS---GIPELVEDGETGLLVPPGD-PEALADAIERLLDDPELRREMGEAGRARVEEEFDIR 349 (355)
T ss_pred ccHHHHHHHHcCCCEEecCCC---CcchhhhCCCceEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHH
Confidence 344555567888877765432 2333444443333344322 378999999999999999999999999999888766
Q ss_pred HHH
Q 011607 382 YVY 384 (481)
Q Consensus 382 ~~~ 384 (481)
.+.
T Consensus 350 ~~~ 352 (355)
T cd03799 350 KQA 352 (355)
T ss_pred HHh
Confidence 543
No 27
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=42.82 E-value=88 Score=31.07 Aligned_cols=81 Identities=16% Similarity=0.101 Sum_probs=54.8
Q ss_pred cccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchh
Q 011607 302 WSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKME 381 (481)
Q Consensus 302 ~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~ 381 (481)
++..+---|+||-.|+..... -..+.+.....+++. + +++.++++.+.++++..++++++|++.+.+.++.+
T Consensus 281 ~~~~~~EAma~G~PvI~s~~~---~~~e~~~~~g~~~~~--~---~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 281 TNPSLLEAMAYGCPVLASDNP---FNREVLGDKAIYFKV--G---DDLASLLEELEADPEEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred CChHHHHHHHcCCCEEEecCC---ccceeecCCeeEecC--c---hHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 444466678888888876532 122333333344332 2 23999999999999999999999999998888877
Q ss_pred HHHHHHHHH
Q 011607 382 YVYDYMFHL 390 (481)
Q Consensus 382 ~~~~Y~~~L 390 (481)
.+..-+..+
T Consensus 353 ~~~~~~~~~ 361 (363)
T cd04955 353 KIADQYEEL 361 (363)
T ss_pred HHHHHHHHH
Confidence 766544433
No 28
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=41.14 E-value=57 Score=34.27 Aligned_cols=68 Identities=16% Similarity=0.135 Sum_probs=44.8
Q ss_pred hHHHHhcCCeeeeec--CchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHH
Q 011607 306 EKYILACDSMTLLVK--PYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEE 377 (481)
Q Consensus 306 lk~LL~~~SvVlk~~--s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~ 377 (481)
.---|+|+..|+.-. ..+.|-. +.+...---+++. | .++|.+++..+.++++.+++++++|++++.++
T Consensus 337 ~lEAma~G~PVI~g~~~~~~~e~~-~~~~~~g~~~~~~-d--~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 337 PLEPAAFGVPVISGPHTFNFKEIF-ERLLQAGAAIQVE-D--AEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN 406 (425)
T ss_pred HHHHHHhCCCEEECCCccCHHHHH-HHHHHCCCeEEEC-C--HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC
Confidence 345688888777632 1233322 2222222233433 2 27899999999999999999999999999776
No 29
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=40.35 E-value=71 Score=32.55 Aligned_cols=80 Identities=9% Similarity=-0.034 Sum_probs=55.9
Q ss_pred cCcccccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHH
Q 011607 298 EGYAWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEE 377 (481)
Q Consensus 298 dG~~~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~ 377 (481)
||.+.+ .---|+||-.|+..+... ..+.+..+..-+=+..|. +++.+++..+.++++..++++++|.+++++.
T Consensus 310 E~~g~~--~lEAma~G~PvI~s~~~~---~~e~i~~~~~g~~~~~~~--~~~a~~i~~l~~~~~~~~~~~~~a~~~~~~~ 382 (392)
T cd03805 310 EHFGIV--PLEAMYAGKPVIACNSGG---PLETVVDGETGFLCEPTP--EEFAEAMLKLANDPDLADRMGAAGRKRVKEK 382 (392)
T ss_pred CCCCch--HHHHHHcCCCEEEECCCC---cHHHhccCCceEEeCCCH--HHHHHHHHHHHhChHHHHHHHHHHHHHHHHh
Confidence 554333 345688898888765422 234455555444355554 7899999999899999999999999999988
Q ss_pred hchhHHH
Q 011607 378 LKMEYVY 384 (481)
Q Consensus 378 L~~~~~~ 384 (481)
.+.+.+.
T Consensus 383 ~s~~~~~ 389 (392)
T cd03805 383 FSTEAFA 389 (392)
T ss_pred cCHHHHh
Confidence 8877654
No 30
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=39.72 E-value=1.3e+02 Score=30.73 Aligned_cols=81 Identities=6% Similarity=-0.042 Sum_probs=54.3
Q ss_pred chHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchhHHH
Q 011607 305 SEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKMEYVY 384 (481)
Q Consensus 305 Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~~~~ 384 (481)
..---|+|+-.|+..+..- ..+.+..+..-+-+.. . +++..++..+..+++..++++++|.+.+.+..+.+.+.
T Consensus 289 ~~lEA~a~G~Pvv~s~~~~---~~~~i~~~~~g~~~~~-~--~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~ 362 (372)
T cd03792 289 TVTEALWKGKPVIAGPVGG---IPLQIEDGETGFLVDT-V--EEAAVRILYLLRDPELRRKMGANAREHVRENFLITRHL 362 (372)
T ss_pred HHHHHHHcCCCEEEcCCCC---chhhcccCCceEEeCC-c--HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 3445678888776654221 1233455555555543 2 56778888888899999999999999998888877766
Q ss_pred HHHHHHH
Q 011607 385 DYMFHLL 391 (481)
Q Consensus 385 ~Y~~~LL 391 (481)
.=|..++
T Consensus 363 ~~~~~~~ 369 (372)
T cd03792 363 KDYLYLI 369 (372)
T ss_pred HHHHHHH
Confidence 5444443
No 31
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=34.04 E-value=1.8e+02 Score=28.10 Aligned_cols=86 Identities=14% Similarity=0.074 Sum_probs=56.4
Q ss_pred ccccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhch
Q 011607 301 AWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKM 380 (481)
Q Consensus 301 ~~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~ 380 (481)
+++...---|+||-.|+..... ...+.+.....=+-+..++ .+++.+++..+.++++. +++.++++.+.+.++.
T Consensus 290 ~~~~~~~Ea~~~G~pvI~~~~~---~~~~~~~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~ 363 (377)
T cd03798 290 GFGLVLLEAMACGLPVVATDVG---GIPEIITDGENGLLVPPGD-PEALAEAILRLLADPWL--RLGRAARRRVAERFSW 363 (377)
T ss_pred cCChHHHHHHhcCCCEEEecCC---ChHHHhcCCcceeEECCCC-HHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhhH
Confidence 4556666778889988865532 2233444444312233322 37888999998888877 7888899998888887
Q ss_pred hHHHHHHHHHHH
Q 011607 381 EYVYDYMFHLLN 392 (481)
Q Consensus 381 ~~~~~Y~~~LL~ 392 (481)
+.+..-+..++.
T Consensus 364 ~~~~~~~~~~~~ 375 (377)
T cd03798 364 ENVAERLLELYR 375 (377)
T ss_pred HHHHHHHHHHHh
Confidence 776665555543
No 32
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=34.00 E-value=1.1e+02 Score=30.27 Aligned_cols=104 Identities=16% Similarity=0.163 Sum_probs=61.9
Q ss_pred CCCCCCCCCeeEeeeCCCCc------cchHHHHhccccCCCCccccchhhhhhhhhccCCccCChhhhccccEEEeecCc
Q 011607 227 GRNWIDREPYAYWKGNPFVA------ETRRDLLTCNLSDKHDWNARLYVQDWILESKRGFQQSNLASQCAHRYKIYIEGY 300 (481)
Q Consensus 227 ~~pW~~K~~kafWRG~~t~~------~~R~~Lv~~~~s~~~~~~a~v~~~~w~~e~~~g~~~~~l~d~c~YKYli~idG~ 300 (481)
..+..+|.-.++|+|..... ..|..|+..-...+ ++... .. .+...+ ...-.+...+-||-+...|.
T Consensus 174 ~~~~~~R~~l~~f~g~~~~~~~~~~~~~r~~l~~~~~~~~-~~~~~--~~---~~~~~~-~~~~~~~l~~S~FCL~p~G~ 246 (302)
T PF03016_consen 174 QRPPARRPYLLFFAGTIRPSSNDYSGGVRQRLLDECKSDP-DFRCS--DG---SETCPS-PSEYMELLRNSKFCLCPRGD 246 (302)
T ss_pred cCCccCCceEEEEeeeccccccccchhhhhHHHHhcccCC-cceee--ec---cccccc-chHHHHhcccCeEEEECCCC
Confidence 45667888999999997643 46777776422211 11110 00 000000 01124456788999999999
Q ss_pred c-cccchHHHHhcCCeeeeecCchhhhhhhhccCCceeE
Q 011607 301 A-WSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYW 338 (481)
Q Consensus 301 ~-~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYV 338 (481)
+ +|.|+-=-|.+|++.+.....+..=|.+.| +|.-+.
T Consensus 247 ~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~l-dw~~fs 284 (302)
T PF03016_consen 247 GPWSRRLYEALAAGCIPVIISDDYVLPFEDVL-DWSRFS 284 (302)
T ss_pred CcccchHHHHhhhceeeEEecCcccCCccccc-CHHHEE
Confidence 7 899999999999976666544444444443 444443
No 33
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=32.17 E-value=2e+02 Score=28.00 Aligned_cols=72 Identities=6% Similarity=-0.090 Sum_probs=46.6
Q ss_pred ccccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHH
Q 011607 301 AWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQE 376 (481)
Q Consensus 301 ~~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~ 376 (481)
+++..+---|+||-.|+...... ..+.+.....=+-+..++ ..+|.+++..+.++++..+++++++++....
T Consensus 275 ~~~~~~~Ea~a~G~Pvi~~~~~~---~~e~i~~~~~g~~~~~~d-~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 346 (359)
T cd03823 275 NFPLVIREALAAGVPVIASDIGG---MAELVRDGVNGLLFPPGD-AEDLAAALERLIDDPDLLERLRAGIEPPRSI 346 (359)
T ss_pred CCChHHHHHHHCCCCEEECCCCC---HHHHhcCCCcEEEECCCC-HHHHHHHHHHHHhChHHHHHHHHhHHHhhhH
Confidence 34445556688898777665331 223333332222333332 3789999999999999999999999887654
No 34
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=29.98 E-value=1.7e+02 Score=29.52 Aligned_cols=77 Identities=12% Similarity=-0.056 Sum_probs=51.1
Q ss_pred hHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchhHHHH
Q 011607 306 EKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKMEYVYD 385 (481)
Q Consensus 306 lk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~~~~~ 385 (481)
+-=-|+||-.||..+.. ...+.+.....=+-+..++ .+++.++|..+.++++..++++++|++++.+..+.+.+..
T Consensus 319 l~Ea~a~G~Pvi~s~~~---~~~e~i~~~~~g~~~~~~~-~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~ 394 (398)
T cd03800 319 ALEAMACGLPVVATAVG---GPRDIVVDGVTGLLVDPRD-PEALAAALRRLLTDPALRRRLSRAGLRRARARYTWERVAA 394 (398)
T ss_pred HHHHHhcCCCEEECCCC---CHHHHccCCCCeEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 44557778777655422 2233344433323333322 3789999998888999999999999999988888776654
Q ss_pred H
Q 011607 386 Y 386 (481)
Q Consensus 386 Y 386 (481)
.
T Consensus 395 ~ 395 (398)
T cd03800 395 R 395 (398)
T ss_pred H
Confidence 3
No 35
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=28.96 E-value=3.2e+02 Score=26.51 Aligned_cols=77 Identities=10% Similarity=0.198 Sum_probs=52.2
Q ss_pred cccchHHHHhcCCeeeeecCc-hhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhch
Q 011607 302 WSVSEKYILACDSMTLLVKPY-FHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKM 380 (481)
Q Consensus 302 ~S~Rlk~LL~~~SvVlk~~s~-~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~ 380 (481)
++..+---|+||-.|+..+.. ..+... ....++ +..+. +++.+++..+.++++..++++++|.+++++..+.
T Consensus 294 ~~~~~~Eama~G~PvI~~~~~~~~~~~~----~~~~~~-~~~~~--~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~ 366 (375)
T cd03821 294 FGIVVAEALACGTPVVTTDKVPWQELIE----YGCGWV-VDDDV--DALAAALRRALELPQRLKAMGENGRALVEERFSW 366 (375)
T ss_pred CCcHHHHHHhcCCCEEEcCCCCHHHHhh----cCceEE-eCCCh--HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCH
Confidence 344455568888877765432 333322 223333 23332 7899999999999999999999999999888887
Q ss_pred hHHHH
Q 011607 381 EYVYD 385 (481)
Q Consensus 381 ~~~~~ 385 (481)
+.+..
T Consensus 367 ~~~~~ 371 (375)
T cd03821 367 TAIAQ 371 (375)
T ss_pred HHHHH
Confidence 76543
No 36
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=26.70 E-value=4.3e+02 Score=27.08 Aligned_cols=84 Identities=10% Similarity=-0.041 Sum_probs=54.7
Q ss_pred ccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchhH
Q 011607 303 SVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKMEY 382 (481)
Q Consensus 303 S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~~ 382 (481)
+..+---|+|+-.|+..+.. ...+.+.....-+-+..++ .+++.++|..+.++++..++++++|++++ +.++.+.
T Consensus 316 g~~~lEAma~G~Pvi~~~~~---~~~e~i~~~~~g~~~~~~d-~~~la~~i~~~l~~~~~~~~~~~~~~~~~-~~fsw~~ 390 (405)
T TIGR03449 316 GLVAMEAQACGTPVVAARVG---GLPVAVADGETGLLVDGHD-PADWADALARLLDDPRTRIRMGAAAVEHA-AGFSWAA 390 (405)
T ss_pred ChHHHHHHHcCCCEEEecCC---CcHhhhccCCceEECCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHH-HhCCHHH
Confidence 33455667788777765532 1223444555555565433 37899999988889999999999999987 4467666
Q ss_pred HHHHHHHHH
Q 011607 383 VYDYMFHLL 391 (481)
Q Consensus 383 ~~~Y~~~LL 391 (481)
+..=+..++
T Consensus 391 ~~~~~~~~y 399 (405)
T TIGR03449 391 TADGLLSSY 399 (405)
T ss_pred HHHHHHHHH
Confidence 655333333
No 37
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=26.13 E-value=2.4e+02 Score=30.31 Aligned_cols=80 Identities=9% Similarity=-0.028 Sum_probs=49.7
Q ss_pred cchHHHHhcCCeeeeecCc-hhhhhhhhccC---CceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhc
Q 011607 304 VSEKYILACDSMTLLVKPY-FHDFFIRYLQP---LRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELK 379 (481)
Q Consensus 304 ~Rlk~LL~~~SvVlk~~s~-~~e~f~~~L~P---~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~ 379 (481)
..+-=-|+||-.|+..+.. ..|...+. .. +..=+=+...+ .++|.+++..+.++++..++++++|++.++++.+
T Consensus 385 ~~vlEAma~G~PVVatd~g~~~elv~~~-~~~~~g~~G~lv~~~d-~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~~s 462 (475)
T cd03813 385 LVILEAMAAGIPVVATDVGSCRELIEGA-DDEALGPAGEVVPPAD-PEALARAILRLLKDPELRRAMGEAGRKRVERYYT 462 (475)
T ss_pred hHHHHHHHcCCCEEECCCCChHHHhcCC-cccccCCceEEECCCC-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCC
Confidence 3344557788877664321 33332220 00 11111122221 3789999999999999999999999999999888
Q ss_pred hhHHHH
Q 011607 380 MEYVYD 385 (481)
Q Consensus 380 ~~~~~~ 385 (481)
.+.+..
T Consensus 463 ~~~~~~ 468 (475)
T cd03813 463 LERMID 468 (475)
T ss_pred HHHHHH
Confidence 665444
No 38
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=25.36 E-value=2.9e+02 Score=29.04 Aligned_cols=81 Identities=7% Similarity=-0.073 Sum_probs=53.7
Q ss_pred cccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchh
Q 011607 302 WSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKME 381 (481)
Q Consensus 302 ~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~ 381 (481)
.+..+---|+||-.|+..... -..+.+....+=+=+..+...+++.++|..+.++++..++++++|++++++..+.+
T Consensus 323 ~p~~llEAma~G~PVIas~vg---g~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~ 399 (407)
T cd04946 323 LPVSIMEAMSFGIPVIATNVG---GTPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDNEEEYQTMREKAREKWEENFNAS 399 (407)
T ss_pred ccHHHHHHHHcCCCEEeCCCC---CcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHH
Confidence 444556678888888765421 12234444432121222111378999999988899999999999999999998877
Q ss_pred HHHH
Q 011607 382 YVYD 385 (481)
Q Consensus 382 ~~~~ 385 (481)
..+.
T Consensus 400 ~~~~ 403 (407)
T cd04946 400 KNYR 403 (407)
T ss_pred HhHH
Confidence 5543
No 39
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=25.02 E-value=2.5e+02 Score=30.07 Aligned_cols=30 Identities=10% Similarity=0.059 Sum_probs=26.8
Q ss_pred ccHHHHHHhchhcHHHHHHHHHHHHHHHHH
Q 011607 347 KSIKFAVDWGNTHKQKAQEIGRAASNFIQE 376 (481)
Q Consensus 347 sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~ 376 (481)
++|.++|..+.++++..++++++|++.+.+
T Consensus 388 ~~la~~i~~ll~~~~~~~~~~~~a~~~~~~ 417 (465)
T PLN02871 388 DDCVEKLETLLADPELRERMGAAAREEVEK 417 (465)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHh
Confidence 788889999989999999999999998854
No 40
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=24.49 E-value=3.7e+02 Score=26.12 Aligned_cols=78 Identities=8% Similarity=-0.094 Sum_probs=51.9
Q ss_pred cccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchh
Q 011607 302 WSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKME 381 (481)
Q Consensus 302 ~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~ 381 (481)
++..+---|+||-.||..... ...+.+.....-+=+..+. .+++.+++..+..+++..+++++++.+++ +..+.+
T Consensus 279 ~~~~~lEa~a~g~PvI~~~~~---~~~~~i~~~~~g~~~~~~~-~~~l~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~ 353 (364)
T cd03814 279 FGLVVLEAMASGLPVVAPDAG---GPADIVTDGENGLLVEPGD-AEAFAAALAALLADPELRRRMAARARAEA-ERRSWE 353 (364)
T ss_pred CCcHHHHHHHcCCCEEEcCCC---CchhhhcCCcceEEcCCCC-HHHHHHHHHHHHcCHHHHHHHHHHHHHHH-hhcCHH
Confidence 445566678999988876533 2334444433333344332 25688899988999999999999999988 556655
Q ss_pred HHH
Q 011607 382 YVY 384 (481)
Q Consensus 382 ~~~ 384 (481)
.+.
T Consensus 354 ~~~ 356 (364)
T cd03814 354 AFL 356 (364)
T ss_pred HHH
Confidence 443
No 41
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=23.25 E-value=1.9e+02 Score=30.41 Aligned_cols=77 Identities=5% Similarity=-0.038 Sum_probs=53.3
Q ss_pred CcccccchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhc---HHHHHHHHHHHHHHHH
Q 011607 299 GYAWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTH---KQKAQEIGRAASNFIQ 375 (481)
Q Consensus 299 G~~~S~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h---~~~Aq~IA~~g~~fa~ 375 (481)
|.+.+..+--.|+||-.|+..... -..+.+.....=+-+. | .++|.+++..+.++ +++.++++++|+++++
T Consensus 327 ~~~~p~~~~Eama~G~PVI~s~~~---~~~eiv~~~~~G~lv~-d--~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~ 400 (415)
T cd03816 327 GLDLPMKVVDMFGCGLPVCALDFK---CIDELVKHGENGLVFG-D--SEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE 400 (415)
T ss_pred ccCCcHHHHHHHHcCCCEEEeCCC---CHHHHhcCCCCEEEEC-C--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh
Confidence 344555566679999988875532 2234444544444443 4 38999999998888 8999999999999987
Q ss_pred HHhchh
Q 011607 376 EELKME 381 (481)
Q Consensus 376 ~~L~~~ 381 (481)
+.+..+
T Consensus 401 ~~~~~~ 406 (415)
T cd03816 401 LRWDEN 406 (415)
T ss_pred cCHHHH
Confidence 665543
No 42
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=22.59 E-value=2.8e+02 Score=28.67 Aligned_cols=87 Identities=11% Similarity=0.037 Sum_probs=56.6
Q ss_pred cchHHHHhcCCeeeeecCchhhhhhhhccCCceeEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHhchhHH
Q 011607 304 VSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKMEYV 383 (481)
Q Consensus 304 ~Rlk~LL~~~SvVlk~~s~~~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L~~~~~ 383 (481)
..+---|+||-.|+..... -..+.+.....++. ..|. .++.+++..+.+++.+.+.+.+++.+++++..+.+.+
T Consensus 284 ~~~~EAma~G~PVI~s~~g---g~~e~i~~~~~~~~-~~~~--~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~fs~~~~ 357 (398)
T cd03796 284 IAIVEAASCGLLVVSTRVG---GIPEVLPPDMILLA-EPDV--ESIVRKLEEAISILRTGKHDPWSFHNRVKKMYSWEDV 357 (398)
T ss_pred HHHHHHHHcCCCEEECCCC---CchhheeCCceeec-CCCH--HHHHHHHHHHHhChhhhhhHHHHHHHHHHhhCCHHHH
Confidence 3456778999988775432 12233333333332 3343 7899999988888877778889999999888887776
Q ss_pred HHHHHHHHHHHHHhhc
Q 011607 384 YDYMFHLLNEYAKLLK 399 (481)
Q Consensus 384 ~~Y~~~LL~eYa~l~~ 399 (481)
..-+ +.-|.+++.
T Consensus 358 ~~~~---~~~y~~l~~ 370 (398)
T cd03796 358 AKRT---EKVYDRILQ 370 (398)
T ss_pred HHHH---HHHHHHHhc
Confidence 6544 344445543
No 43
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=22.34 E-value=2.7e+02 Score=27.52 Aligned_cols=75 Identities=9% Similarity=0.038 Sum_probs=48.5
Q ss_pred ccccchHHHHhcCCeeeeecC-chhhhhhhhccCC-ceeEecCCCCCcccHHHHHH-hchhcHHHHHHHHHHHHHHHHHH
Q 011607 301 AWSVSEKYILACDSMTLLVKP-YFHDFFIRYLQPL-RHYWPIRDKDKCKSIKFAVD-WGNTHKQKAQEIGRAASNFIQEE 377 (481)
Q Consensus 301 ~~S~Rlk~LL~~~SvVlk~~s-~~~e~f~~~L~P~-~HYVPv~~d~~~sDL~~~v~-w~~~h~~~Aq~IA~~g~~fa~~~ 377 (481)
+++..+---|+|+-.|+.... ...| .+... ..++ +..++ .+++.+++. .+..++++.++++++|++++.++
T Consensus 276 ~~~~~l~EA~a~G~PvI~~~~~~~~e----~i~~~~~g~~-~~~~~-~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 276 AFGRTAVEAQAMGRPVIASDHGGARE----TVRPGETGLL-VPPGD-AEALAQALDQILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred CCchHHHHHHhcCCCEEEcCCCCcHH----HHhCCCceEE-eCCCC-HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHh
Confidence 344445566788887766542 2333 33333 2333 33322 378888884 66678999999999999999888
Q ss_pred hchh
Q 011607 378 LKME 381 (481)
Q Consensus 378 L~~~ 381 (481)
.+.+
T Consensus 350 f~~~ 353 (355)
T cd03819 350 FSYD 353 (355)
T ss_pred hhhc
Confidence 7654
Done!