Your job contains 1 sequence.
>011610
MNFTLARFVFQFAVSLDTASTRSNCKYLLLTSKKRKFTTAAIPLTHTSSEELLVVVGGGA
AGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHK
EFRGSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQ
TGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSIVD
PVPSLFTFKIADSQLTELSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVI
LRLSAWGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLV
KRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPLS
EISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSNDATLKNRG
F
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011610
(481 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2177997 - symbol:AT5G39940 "AT5G39940" species... 1540 4.8e-158 1
UNIPROTKB|Q81KN6 - symbol:BAS4604 "Uncharacterized protei... 466 3.1e-44 1
TIGR_CMR|BA_4960 - symbol:BA_4960 "conserved hypothetical... 466 3.1e-44 1
UNIPROTKB|Q71Y97 - symbol:LMOf2365_1947 "Putative unchara... 410 2.6e-38 1
UNIPROTKB|Q3AAT1 - symbol:CHY_1934 "Putative uncharacteri... 365 1.5e-33 1
TIGR_CMR|CHY_1934 - symbol:CHY_1934 "conserved hypothetic... 365 1.5e-33 1
UNIPROTKB|Q9KVQ9 - symbol:VC_0080 "Putative uncharacteriz... 213 1.2e-29 2
TIGR_CMR|VC_0080 - symbol:VC_0080 "conserved hypothetical... 213 1.2e-29 2
UNIPROTKB|Q3ZA06 - symbol:DET0195 "Putative uncharacteriz... 204 1.3e-29 2
TIGR_CMR|DET_0195 - symbol:DET_0195 "conserved hypothetic... 204 1.3e-29 2
UNIPROTKB|Q48AK0 - symbol:CPS_0145 "Putative uncharacteri... 203 2.5e-29 2
TIGR_CMR|CPS_0145 - symbol:CPS_0145 "conserved hypothetic... 203 2.5e-29 2
UNIPROTKB|Q5LU70 - symbol:SPO1188 "Uncharacterized protei... 201 6.6e-27 2
TIGR_CMR|SPO_1188 - symbol:SPO_1188 "conserved hypothetic... 201 6.6e-27 2
UNIPROTKB|Q8EKN8 - symbol:yhiN "HI0933 family flavoprotei... 188 2.9e-26 2
TIGR_CMR|SO_0054 - symbol:SO_0054 "conserved hypothetical... 188 2.9e-26 2
UNIPROTKB|P37631 - symbol:yhiN "predicted oxidoreductase ... 187 6.6e-26 2
UNIPROTKB|Q87VD1 - symbol:PSPTO_5008 "Uncharacterized pro... 175 5.0e-24 2
UNIPROTKB|Q48P62 - symbol:PSPPH_0505 "Uncharacterized pro... 179 6.8e-24 2
UNIPROTKB|Q4K4K2 - symbol:PFL_5773 "Pyridine nucleotide-d... 169 1.1e-22 2
UNIPROTKB|Q3Z9X5 - symbol:DET0226 "Putative uncharacteriz... 219 1.9e-15 1
TIGR_CMR|DET_0226 - symbol:DET_0226 "conserved hypothetic... 219 1.9e-15 1
UNIPROTKB|Q5LMX6 - symbol:SPO3436 "Uncharacterized protei... 82 0.00091 2
TIGR_CMR|SPO_3436 - symbol:SPO_3436 "conserved hypothetic... 82 0.00091 2
>TAIR|locus:2177997 [details] [associations]
symbol:AT5G39940 "AT5G39940" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0042744 "hydrogen
peroxide catabolic process" evidence=RCA] InterPro:IPR013027
PRINTS:PR00368 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0055114 HOGENOM:HOG000043048 UniGene:At.10806
UniGene:At.30316 eggNOG:COG2081 KO:K07007 OMA:VMDVSGW
InterPro:IPR004792 Pfam:PF03486 TIGRFAMs:TIGR00275 EMBL:BT002493
EMBL:BT009681 IPI:IPI00524832 RefSeq:NP_198810.2
ProteinModelPortal:Q8GUI2 SMR:Q8GUI2 STRING:Q8GUI2 PaxDb:Q8GUI2
PRIDE:Q8GUI2 EnsemblPlants:AT5G39940.1 GeneID:833991
KEGG:ath:AT5G39940 TAIR:At5g39940 InParanoid:Q8GUI2
PhylomeDB:Q8GUI2 ProtClustDB:CLSN2680384 ArrayExpress:Q8GUI2
Genevestigator:Q8GUI2 Uniprot:Q8GUI2
Length = 480
Score = 1540 (547.2 bits), Expect = 4.8e-158, P = 4.8e-158
Identities = 304/451 (67%), Positives = 352/451 (78%)
Query: 33 KKRKFTTAAIPLTHTSSE----ELLXXXXXXXXXXXXXIRAKTVAPKLNVVIIEKGKPLS 88
++R FT AI E ELL IRAKT++P L V++IEKG LS
Sbjct: 23 RRRIFTATAITSLADKGEKDESELLVVVGGGAAGVYGAIRAKTLSPDLRVLVIEKGSFLS 82
Query: 89 KVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTMSWFSDHGVELKT 148
KVKISGGGRCNVTNGHC D + LAGHYPRGHKE +GSFF HGP DTMSWFS+HGV LKT
Sbjct: 83 KVKISGGGRCNVTNGHCNDTINLAGHYPRGHKELKGSFFYTHGPADTMSWFSEHGVPLKT 142
Query: 149 EDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208
EDDGRVFPVSD+S SV+DCLL EA RGV L+ GK V AS G KFL+KV K++ +
Sbjct: 143 EDDGRVFPVSDNSLSVVDCLLNEANIRGVRLERGKSVLAASIKPDG-KFLVKVGKQSADT 201
Query: 209 VECIEADYLLIASGSSQQGHRLAAQLGHSIVDPVPSLFTFKIADSQLTELSGVSFPKVVA 268
E IEA YLLIA+GSSQ+GH LA + GHSIVDPVPSLFTFKI D LTEL+G+SF KV A
Sbjct: 202 SESIEATYLLIATGSSQKGHSLATKFGHSIVDPVPSLFTFKINDPLLTELAGISFSKVQA 261
Query: 269 KLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLFSSCYKGMLTVDFVPDL 328
KLKL+N L Q+GPMLVTHWGLSGPVILRLSAWGARYLFSS YKG L VDF+PD+
Sbjct: 262 KLKLDNPCPDLSNLVQIGPMLVTHWGLSGPVILRLSAWGARYLFSSKYKGHLIVDFIPDI 321
Query: 329 HIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLI 388
+IE +S+L +HK++F+K KV NS PP+F LV RFW+YIL REG S DTLWAS+SNNSL
Sbjct: 322 NIETAKSVLKEHKLQFSKHKVSNSYPPQFGLVNRFWRYILDREGSSKDTLWASLSNNSLS 381
Query: 389 SIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVT 448
SI+ LLKHCT +V GKGQ+KDEFVTAGGVPLSE+SL TMESK+ P LFFAGEVLNVDGVT
Sbjct: 382 SISDLLKHCTFQVTGKGQYKDEFVTAGGVPLSEVSLKTMESKLVPNLFFAGEVLNVDGVT 441
Query: 449 GGFNFQNAWSGGYIAGTSIGKLSNDATLKNR 479
GGFNFQNAWSGGYIAGT+IG+L++ + + ++
Sbjct: 442 GGFNFQNAWSGGYIAGTNIGELASSSRISSK 472
>UNIPROTKB|Q81KN6 [details] [associations]
symbol:BAS4604 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR013027 PRINTS:PR00368
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0055114
HOGENOM:HOG000043048 KO:K07007 Gene3D:1.10.8.260 InterPro:IPR004792
InterPro:IPR023166 Pfam:PF03486 TIGRFAMs:TIGR00275 OMA:RHIPGNG
RefSeq:NP_847155.1 RefSeq:YP_030850.1 RefSeq:YP_052650.1
ProteinModelPortal:Q81KN6 SMR:Q81KN6 DNASU:1084175
EnsemblBacteria:EBBACT00000010897 EnsemblBacteria:EBBACT00000015786
EnsemblBacteria:EBBACT00000021402 GeneID:1084175 GeneID:2821017
GeneID:2850376 KEGG:ban:BA_4960 KEGG:bar:GBAA_4960 KEGG:bat:BAS4604
ProtClustDB:CLSK917468 BioCyc:BANT260799:GJAJ-4660-MONOMER
BioCyc:BANT261594:GJ7F-4818-MONOMER Uniprot:Q81KN6
Length = 423
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 134/402 (33%), Positives = 208/402 (51%)
Query: 77 NVVIIEKGKPLS-KVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDT 135
+V++++KG L K+ ISGGGRCNVTN D+++ H P G+ F S FS+ D
Sbjct: 27 SVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVK--HIP-GNGRFLYSAFSIFNNEDI 83
Query: 136 MSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGR 195
+++F + GV+LK ED GR+FPVS+ + SV+D LLT K GV ++T V T +N
Sbjct: 84 ITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQT 143
Query: 196 K-FLLKV-EKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSIVDPVPSLFTFKIADS 253
K +LK E N V + +GS+ G+ A + GH+I + P+ +
Sbjct: 144 KAVVLKTGEVLETNHVVIAVGGKSVPQTGSTGDGYAWAKKAGHTITELFPTEVPILSNEP 203
Query: 254 QLTE--LSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYL 311
+ + L G++ V L + N + ++ ML TH+GLSGP LR S + + L
Sbjct: 204 FIQDRSLQGLALRDV--NLSVLN-PKGKAIISHKMDMLFTHFGLSGPAALRCSQFVVKAL 260
Query: 312 FS-SCYKGMLTVDFVPDLHIEDM-QSILSQHKIRFAK--QKVLNSCPPEFCLVKRFWKYI 367
+++D +P+ + E + Q +L Q K K + VL PE R++ ++
Sbjct: 261 KKFKTNTVQMSIDALPEENSEQLFQRMLKQMKEDPKKGIKNVLKGYVPE-----RYFLFL 315
Query: 368 LGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTM 427
L R + G VS+ + ++ + K T+ V G + FVT GGV + EI+ M
Sbjct: 316 LERNEIDGSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGGVSVKEINPKEM 375
Query: 428 ESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGK 469
SK L+F GEVL++ G TGG+N +A G IAGT+ G+
Sbjct: 376 SSKFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGE 417
>TIGR_CMR|BA_4960 [details] [associations]
symbol:BA_4960 "conserved hypothetical protein TIGR00275"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR013027 PRINTS:PR00368 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0055114 HOGENOM:HOG000043048
KO:K07007 Gene3D:1.10.8.260 InterPro:IPR004792 InterPro:IPR023166
Pfam:PF03486 TIGRFAMs:TIGR00275 OMA:RHIPGNG RefSeq:NP_847155.1
RefSeq:YP_030850.1 RefSeq:YP_052650.1 ProteinModelPortal:Q81KN6
SMR:Q81KN6 DNASU:1084175 EnsemblBacteria:EBBACT00000010897
EnsemblBacteria:EBBACT00000015786 EnsemblBacteria:EBBACT00000021402
GeneID:1084175 GeneID:2821017 GeneID:2850376 KEGG:ban:BA_4960
KEGG:bar:GBAA_4960 KEGG:bat:BAS4604 ProtClustDB:CLSK917468
BioCyc:BANT260799:GJAJ-4660-MONOMER
BioCyc:BANT261594:GJ7F-4818-MONOMER Uniprot:Q81KN6
Length = 423
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 134/402 (33%), Positives = 208/402 (51%)
Query: 77 NVVIIEKGKPLS-KVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDT 135
+V++++KG L K+ ISGGGRCNVTN D+++ H P G+ F S FS+ D
Sbjct: 27 SVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVK--HIP-GNGRFLYSAFSIFNNEDI 83
Query: 136 MSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGR 195
+++F + GV+LK ED GR+FPVS+ + SV+D LLT K GV ++T V T +N
Sbjct: 84 ITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQT 143
Query: 196 K-FLLKV-EKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSIVDPVPSLFTFKIADS 253
K +LK E N V + +GS+ G+ A + GH+I + P+ +
Sbjct: 144 KAVVLKTGEVLETNHVVIAVGGKSVPQTGSTGDGYAWAKKAGHTITELFPTEVPILSNEP 203
Query: 254 QLTE--LSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYL 311
+ + L G++ V L + N + ++ ML TH+GLSGP LR S + + L
Sbjct: 204 FIQDRSLQGLALRDV--NLSVLN-PKGKAIISHKMDMLFTHFGLSGPAALRCSQFVVKAL 260
Query: 312 FS-SCYKGMLTVDFVPDLHIEDM-QSILSQHKIRFAK--QKVLNSCPPEFCLVKRFWKYI 367
+++D +P+ + E + Q +L Q K K + VL PE R++ ++
Sbjct: 261 KKFKTNTVQMSIDALPEENSEQLFQRMLKQMKEDPKKGIKNVLKGYVPE-----RYFLFL 315
Query: 368 LGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTM 427
L R + G VS+ + ++ + K T+ V G + FVT GGV + EI+ M
Sbjct: 316 LERNEIDGSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGGVSVKEINPKEM 375
Query: 428 ESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGK 469
SK L+F GEVL++ G TGG+N +A G IAGT+ G+
Sbjct: 376 SSKFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGE 417
>UNIPROTKB|Q71Y97 [details] [associations]
symbol:LMOf2365_1947 "Putative uncharacterized protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR013027 PRINTS:PR00368 GO:GO:0055114
EMBL:AE017262 GenomeReviews:AE017262_GR HOGENOM:HOG000043048
eggNOG:COG2081 KO:K07007 InterPro:IPR004792 Pfam:PF03486
TIGRFAMs:TIGR00275 OMA:RHIPGNG RefSeq:YP_014540.1
ProteinModelPortal:Q71Y97 SMR:Q71Y97 STRING:Q71Y97 GeneID:2799211
KEGG:lmf:LMOf2365_1947 PATRIC:20325187 ProtClustDB:CLSK564677
Uniprot:Q71Y97
Length = 421
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 122/401 (30%), Positives = 198/401 (49%)
Query: 78 VVIIEKGKPLS-KVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTM 136
V++IEKG L K+ +SGGGRCNVTN A+++I H P G+ F S F D +
Sbjct: 28 VLLIEKGPKLGRKLIMSGGGRCNVTNRRPAEEIIK--HIP-GNGRFLYSAFHAFDNEDII 84
Query: 137 SWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRK 196
+F GV LK ED GR+FPVS+S+ SV + ++ + GV + V ++ K
Sbjct: 85 RFFERLGVALKEEDHGRMFPVSNSARSVAEAMIQRMEKLGVKIYMQTAVKQVDYEDGHVK 144
Query: 197 FLLKVEKRTMNLVECIEA--DYLLIASGSSQQGHRLAAQLGHSIVDPVPSLFTFKIADSQ 254
+ + + ++ I A + +GS+ G+ A + GH+I + P+ ++
Sbjct: 145 GVTLKDGQEISASAVIVAVGGKSVPRTGSTGDGYAWAKKAGHTITELYPTEVPITSSEPF 204
Query: 255 LTE--LSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLF 312
+ + L G S V L + N + P +T M+ TH+G+SGP LR S + R L
Sbjct: 205 IKQKVLQGTSLRDV--SLSVLNA-KGKPIITHQMDMIFTHFGVSGPAALRCSMFVLRELK 261
Query: 313 SSCYKGM-LTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGRE 371
+ + + +D P++ ++ + + K+ + NS L ++ ++L +
Sbjct: 262 KTGASTVKMRLDLFPNVSAAELSKDVYKLLEENPKKALKNSLSS--LLQEKMLLFLLEKA 319
Query: 372 GLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTMESKI 431
L + VS + +LLK T EV G F+ FVT GGV + EI M+SK+
Sbjct: 320 DLDETADYKQVSPKKIEQFIQLLKDFTFEVNGTLDFEKAFVTGGGVSVKEIKPKEMQSKL 379
Query: 432 HPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSN 472
LFF GE+L+++G TGG+N A G+ AG ++SN
Sbjct: 380 MEGLFFCGEILDINGYTGGYNITCALVTGHTAGAYAAEVSN 420
>UNIPROTKB|Q3AAT1 [details] [associations]
symbol:CHY_1934 "Putative uncharacterized protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR013027 PRINTS:PR00368 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0055114 HOGENOM:HOG000043048
eggNOG:COG2081 KO:K07007 InterPro:IPR004792 Pfam:PF03486
TIGRFAMs:TIGR00275 RefSeq:YP_360753.1 ProteinModelPortal:Q3AAT1
STRING:Q3AAT1 GeneID:3727590 KEGG:chy:CHY_1934 PATRIC:21276959
OMA:RHIPGNG BioCyc:CHYD246194:GJCN-1933-MONOMER Uniprot:Q3AAT1
Length = 394
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 102/337 (30%), Positives = 179/337 (53%)
Query: 134 DTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGV-VLQTGKVVTTASSDN 192
D M++F +G++LK E+ +V+P SD + V+ L + +GV +L KV +D
Sbjct: 77 DLMAFFIKNGLKLKVEEK-KVYPASDKAKDVVKLLEKLLRKKGVEILYKQKVKDILVND- 134
Query: 193 AGRKFLLKVEKRTMNLVECIEAD--YLLIASGSSQQGHRLAAQLGHSIVDPVPSLFTFKI 250
G+ ++ + + I A +GSS G L ++LGH+I+ P P+L K+
Sbjct: 135 -GQVLGVRTKDGIYYAAKVIVATGGASFPQTGSSGDGFELLSKLGHNIISPRPALVPLKL 193
Query: 251 ADSQLTELSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARY 310
A+ ++ ELSG++ V + L + GP+L TH+GLSGP +L LS Y
Sbjct: 194 AE-KVAELSGIT----VMDVNLALFSSGKKLKARRGPLLFTHFGLSGPTVLNLSC----Y 244
Query: 311 LFSSCYKGMLTVDFVPDLHIEDM-QSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILG 369
L + + + +DF P+ ++++ + I+S + + N+ P + L ++ +++L
Sbjct: 245 LPLNFSEAKIKIDFFPEYSVDELKEKIISN-----GNKTLKNALPGK--LPEKLREWLLN 297
Query: 370 REGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTMES 429
G + + S+S + +++ LK + G + +VTAGGV + EI+ +TMES
Sbjct: 298 YYGQNPKAVVHSLSPKVVTKVSQALKGTFFNLTGTMPLEMAYVTAGGVDVKEINPSTMES 357
Query: 430 KIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTS 466
++ ++ AGEV++ G TGGFN Q A+S GY+AG S
Sbjct: 358 RLIKGVYLAGEVIDCHGETGGFNLQMAFSTGYLAGKS 394
Score = 244 (91.0 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 78/266 (29%), Positives = 136/266 (51%)
Query: 78 VVIIEKGKPLSK-VKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTM 136
V++IEK L K + ++G GR N+TN + +Y G K + + F+ D M
Sbjct: 24 VLLIEKTDSLGKKLCLTGNGRGNITNITPINNFY--EYYHNG-KFLKKALFTFTNE-DLM 79
Query: 137 SWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGV-VLQTGKVVTTASSDNAGR 195
++F +G++LK E+ +V+P SD + V+ L + +GV +L KV +D G+
Sbjct: 80 AFFIKNGLKLKVEEK-KVYPASDKAKDVVKLLEKLLRKKGVEILYKQKVKDILVND--GQ 136
Query: 196 KFLLKVEKRTMNLVECIEAD--YLLIASGSSQQGHRLAAQLGHSIVDPVPSLFTFKIADS 253
++ + + I A +GSS G L ++LGH+I+ P P+L K+A+
Sbjct: 137 VLGVRTKDGIYYAAKVIVATGGASFPQTGSSGDGFELLSKLGHNIISPRPALVPLKLAE- 195
Query: 254 QLTELSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLFS 313
++ ELSG++ V + L + GP+L TH+GLSGP +L LS YL
Sbjct: 196 KVAELSGIT----VMDVNLALFSSGKKLKARRGPLLFTHFGLSGPTVLNLSC----YLPL 247
Query: 314 SCYKGMLTVDFVPDLHIEDM-QSILS 338
+ + + +DF P+ ++++ + I+S
Sbjct: 248 NFSEAKIKIDFFPEYSVDELKEKIIS 273
>TIGR_CMR|CHY_1934 [details] [associations]
symbol:CHY_1934 "conserved hypothetical protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR013027 PRINTS:PR00368 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0055114 HOGENOM:HOG000043048
eggNOG:COG2081 KO:K07007 InterPro:IPR004792 Pfam:PF03486
TIGRFAMs:TIGR00275 RefSeq:YP_360753.1 ProteinModelPortal:Q3AAT1
STRING:Q3AAT1 GeneID:3727590 KEGG:chy:CHY_1934 PATRIC:21276959
OMA:RHIPGNG BioCyc:CHYD246194:GJCN-1933-MONOMER Uniprot:Q3AAT1
Length = 394
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 102/337 (30%), Positives = 179/337 (53%)
Query: 134 DTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGV-VLQTGKVVTTASSDN 192
D M++F +G++LK E+ +V+P SD + V+ L + +GV +L KV +D
Sbjct: 77 DLMAFFIKNGLKLKVEEK-KVYPASDKAKDVVKLLEKLLRKKGVEILYKQKVKDILVND- 134
Query: 193 AGRKFLLKVEKRTMNLVECIEAD--YLLIASGSSQQGHRLAAQLGHSIVDPVPSLFTFKI 250
G+ ++ + + I A +GSS G L ++LGH+I+ P P+L K+
Sbjct: 135 -GQVLGVRTKDGIYYAAKVIVATGGASFPQTGSSGDGFELLSKLGHNIISPRPALVPLKL 193
Query: 251 ADSQLTELSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARY 310
A+ ++ ELSG++ V + L + GP+L TH+GLSGP +L LS Y
Sbjct: 194 AE-KVAELSGIT----VMDVNLALFSSGKKLKARRGPLLFTHFGLSGPTVLNLSC----Y 244
Query: 311 LFSSCYKGMLTVDFVPDLHIEDM-QSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILG 369
L + + + +DF P+ ++++ + I+S + + N+ P + L ++ +++L
Sbjct: 245 LPLNFSEAKIKIDFFPEYSVDELKEKIISN-----GNKTLKNALPGK--LPEKLREWLLN 297
Query: 370 REGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTMES 429
G + + S+S + +++ LK + G + +VTAGGV + EI+ +TMES
Sbjct: 298 YYGQNPKAVVHSLSPKVVTKVSQALKGTFFNLTGTMPLEMAYVTAGGVDVKEINPSTMES 357
Query: 430 KIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTS 466
++ ++ AGEV++ G TGGFN Q A+S GY+AG S
Sbjct: 358 RLIKGVYLAGEVIDCHGETGGFNLQMAFSTGYLAGKS 394
Score = 244 (91.0 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 78/266 (29%), Positives = 136/266 (51%)
Query: 78 VVIIEKGKPLSK-VKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTM 136
V++IEK L K + ++G GR N+TN + +Y G K + + F+ D M
Sbjct: 24 VLLIEKTDSLGKKLCLTGNGRGNITNITPINNFY--EYYHNG-KFLKKALFTFTNE-DLM 79
Query: 137 SWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGV-VLQTGKVVTTASSDNAGR 195
++F +G++LK E+ +V+P SD + V+ L + +GV +L KV +D G+
Sbjct: 80 AFFIKNGLKLKVEEK-KVYPASDKAKDVVKLLEKLLRKKGVEILYKQKVKDILVND--GQ 136
Query: 196 KFLLKVEKRTMNLVECIEAD--YLLIASGSSQQGHRLAAQLGHSIVDPVPSLFTFKIADS 253
++ + + I A +GSS G L ++LGH+I+ P P+L K+A+
Sbjct: 137 VLGVRTKDGIYYAAKVIVATGGASFPQTGSSGDGFELLSKLGHNIISPRPALVPLKLAE- 195
Query: 254 QLTELSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLFS 313
++ ELSG++ V + L + GP+L TH+GLSGP +L LS YL
Sbjct: 196 KVAELSGIT----VMDVNLALFSSGKKLKARRGPLLFTHFGLSGPTVLNLSC----YLPL 247
Query: 314 SCYKGMLTVDFVPDLHIEDM-QSILS 338
+ + + +DF P+ ++++ + I+S
Sbjct: 248 NFSEAKIKIDFFPEYSVDELKEKIIS 273
>UNIPROTKB|Q9KVQ9 [details] [associations]
symbol:VC_0080 "Putative uncharacterized protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE003852 GenomeReviews:AE003852_GR KO:K07007
OMA:VMDVSGW Gene3D:1.10.8.260 InterPro:IPR004792 InterPro:IPR023166
Pfam:PF03486 TIGRFAMs:TIGR00275 PIR:A82366 RefSeq:NP_229739.1
ProteinModelPortal:Q9KVQ9 SMR:Q9KVQ9 DNASU:2614422 GeneID:2614422
KEGG:vch:VC0080 PATRIC:20079216 ProtClustDB:CLSK873851
Uniprot:Q9KVQ9
Length = 398
Score = 213 (80.0 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 61/178 (34%), Positives = 90/178 (50%)
Query: 288 MLVTHWGLSGPVILRLSAWGARYLFSSCYKGM-LTVDFVPDLHIEDMQSILSQHKIRFAK 346
+L TH GLSGP +L++S++ G +T + VPD+ D+ +LS K
Sbjct: 232 LLFTHRGLSGPAVLQISSYWT--------PGQTITTNLVPDV---DLAELLSSEKEAHPN 280
Query: 347 QKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQ 406
Q + N+ L KR + ++ R+ L D S L ++ L+ ++ G
Sbjct: 281 QSLKNTLSK--VLPKRLVEVLIERQ-LFADKPLKQYSPKELDAVQTRLEQWSIVPNGTEG 337
Query: 407 FKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAG 464
++ VT GGV +S TME K LFF GEV++V G GG+NFQ AWS GY+AG
Sbjct: 338 YRTAEVTLGGVDTDCLSSKTMECKTVKGLFFIGEVMDVTGWLGGYNFQWAWSSGYVAG 395
Score = 183 (69.5 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 68/241 (28%), Positives = 115/241 (47%)
Query: 78 VVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTM 136
V++++ K P K+ ISGGGRCN TN D + A +Y + F S S + D +
Sbjct: 33 VLLLDHAKKPGRKILISGGGRCNFTN---YD--VSAANYLCQNPHFVKSALSQYTNWDFI 87
Query: 137 SWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRK 196
S S +G+ + D G++F + DS+ ++D LL+E + + ++ + G
Sbjct: 88 SLVSKYGIAFEERDHGQLFCL-DSAKEIVDMLLSECDQPNIEQRYQVEISAIAHTEQG-- 144
Query: 197 FLLKVEKRTMNLVECIEADYLLIASGSSQQ--------GHRLAAQLGHSIVDPVPSL--F 246
F L+ T+ +EC L++A+G G+++A Q G ++ L F
Sbjct: 145 FTLQT---TIGEIECAS---LVVATGGLSMPKLGATPFGYKIAEQFGLPVISTSAGLVPF 198
Query: 247 TFKIADSQ-LTELSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSA 305
T + D + LSGV+ P +E R+ T +L TH GLSGP +L++S+
Sbjct: 199 TLHVQDKEDFAPLSGVAIP-------VE--MRAECGKTFKEALLFTHRGLSGPAVLQISS 249
Query: 306 W 306
+
Sbjct: 250 Y 250
>TIGR_CMR|VC_0080 [details] [associations]
symbol:VC_0080 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE003852
GenomeReviews:AE003852_GR KO:K07007 OMA:VMDVSGW Gene3D:1.10.8.260
InterPro:IPR004792 InterPro:IPR023166 Pfam:PF03486
TIGRFAMs:TIGR00275 PIR:A82366 RefSeq:NP_229739.1
ProteinModelPortal:Q9KVQ9 SMR:Q9KVQ9 DNASU:2614422 GeneID:2614422
KEGG:vch:VC0080 PATRIC:20079216 ProtClustDB:CLSK873851
Uniprot:Q9KVQ9
Length = 398
Score = 213 (80.0 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 61/178 (34%), Positives = 90/178 (50%)
Query: 288 MLVTHWGLSGPVILRLSAWGARYLFSSCYKGM-LTVDFVPDLHIEDMQSILSQHKIRFAK 346
+L TH GLSGP +L++S++ G +T + VPD+ D+ +LS K
Sbjct: 232 LLFTHRGLSGPAVLQISSYWT--------PGQTITTNLVPDV---DLAELLSSEKEAHPN 280
Query: 347 QKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQ 406
Q + N+ L KR + ++ R+ L D S L ++ L+ ++ G
Sbjct: 281 QSLKNTLSK--VLPKRLVEVLIERQ-LFADKPLKQYSPKELDAVQTRLEQWSIVPNGTEG 337
Query: 407 FKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAG 464
++ VT GGV +S TME K LFF GEV++V G GG+NFQ AWS GY+AG
Sbjct: 338 YRTAEVTLGGVDTDCLSSKTMECKTVKGLFFIGEVMDVTGWLGGYNFQWAWSSGYVAG 395
Score = 183 (69.5 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 68/241 (28%), Positives = 115/241 (47%)
Query: 78 VVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTM 136
V++++ K P K+ ISGGGRCN TN D + A +Y + F S S + D +
Sbjct: 33 VLLLDHAKKPGRKILISGGGRCNFTN---YD--VSAANYLCQNPHFVKSALSQYTNWDFI 87
Query: 137 SWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRK 196
S S +G+ + D G++F + DS+ ++D LL+E + + ++ + G
Sbjct: 88 SLVSKYGIAFEERDHGQLFCL-DSAKEIVDMLLSECDQPNIEQRYQVEISAIAHTEQG-- 144
Query: 197 FLLKVEKRTMNLVECIEADYLLIASGSSQQ--------GHRLAAQLGHSIVDPVPSL--F 246
F L+ T+ +EC L++A+G G+++A Q G ++ L F
Sbjct: 145 FTLQT---TIGEIECAS---LVVATGGLSMPKLGATPFGYKIAEQFGLPVISTSAGLVPF 198
Query: 247 TFKIADSQ-LTELSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSA 305
T + D + LSGV+ P +E R+ T +L TH GLSGP +L++S+
Sbjct: 199 TLHVQDKEDFAPLSGVAIP-------VE--MRAECGKTFKEALLFTHRGLSGPAVLQISS 249
Query: 306 W 306
+
Sbjct: 250 Y 250
>UNIPROTKB|Q3ZA06 [details] [associations]
symbol:DET0195 "Putative uncharacterized protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR013027 PRINTS:PR00368 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0055114 HOGENOM:HOG000043048
eggNOG:COG2081 KO:K07007 InterPro:IPR004792 Pfam:PF03486
TIGRFAMs:TIGR00275 OMA:RHIPGNG RefSeq:YP_180943.1
ProteinModelPortal:Q3ZA06 STRING:Q3ZA06 GeneID:3230511
KEGG:det:DET0195 PATRIC:21607467 ProtClustDB:CLSK837610
BioCyc:DETH243164:GJNF-195-MONOMER Uniprot:Q3ZA06
Length = 435
Score = 204 (76.9 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 65/193 (33%), Positives = 94/193 (48%)
Query: 78 VVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTM 136
V+++EK + P K+ ISG GRCN++N + I A P G F S FS + +
Sbjct: 29 VILLEKTEQPGKKMLISGQGRCNISNSRDIAEFITA-FGPNGR--FLYSAFSRFFRQELV 85
Query: 137 SWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRK 196
+ +GVE KTE GR+FPVSD + V+ L A G L +G+ V+ GR
Sbjct: 86 DLLARYGVETKTERGGRLFPVSDKAHDVVAALTEYAS--GAALVSGQKVSQILVSE-GRV 142
Query: 197 FLLKVEKRTMNLVECIEAD--YLLIASGSSQQGHRLAAQLGHSIVDPVPSLFTFKIADSQ 254
+K EK T + A +GSS G RLA LGH+IV P+L + +
Sbjct: 143 VGVKTEKETFRADAAVIATGGASYPGTGSSGDGFRLAEALGHTIVKLRPALVPLVVKEID 202
Query: 255 LTE-LSGVSFPKV 266
L + + GV+ +
Sbjct: 203 LAKSMQGVALKNI 215
Score = 195 (73.7 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 53/184 (28%), Positives = 88/184 (47%)
Query: 283 TQVGPMLVTHWGLSGPVILRLSAWGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKI 342
+++G +++TH+GL GP+ + + A L + +D P L ++ ++ L +
Sbjct: 252 SRMGELMITHFGLGGPLTMLMGLPVAEALEQGAVS--VAIDLKPALSLDKLRLRLQRDFD 309
Query: 343 RFAKQKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVA 402
F K+ N L ++ + + G+ ++ I LK +
Sbjct: 310 TFGKRSFQNLLSE--LLPQKMIRPFVDLTGIDPFKCGGQITAAEREVILANLKCLRFNIT 367
Query: 403 GKGQFKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYI 462
VTAGGV L EI+ TMESK+ L+F GEV+++D TGG+N Q A+S GY+
Sbjct: 368 STLPLSAAVVTAGGVDLKEINPRTMESKLVKGLYFCGEVMDIDADTGGYNLQAAFSTGYL 427
Query: 463 AGTS 466
AG S
Sbjct: 428 AGES 431
Score = 38 (18.4 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 182 GKVVTTASSDNAGRKFLLKVEKR 204
GKV+ ++ G+K L+ + R
Sbjct: 27 GKVILLEKTEQPGKKMLISGQGR 49
>TIGR_CMR|DET_0195 [details] [associations]
symbol:DET_0195 "conserved hypothetical protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR013027 PRINTS:PR00368 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0055114 HOGENOM:HOG000043048
eggNOG:COG2081 KO:K07007 InterPro:IPR004792 Pfam:PF03486
TIGRFAMs:TIGR00275 OMA:RHIPGNG RefSeq:YP_180943.1
ProteinModelPortal:Q3ZA06 STRING:Q3ZA06 GeneID:3230511
KEGG:det:DET0195 PATRIC:21607467 ProtClustDB:CLSK837610
BioCyc:DETH243164:GJNF-195-MONOMER Uniprot:Q3ZA06
Length = 435
Score = 204 (76.9 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 65/193 (33%), Positives = 94/193 (48%)
Query: 78 VVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTM 136
V+++EK + P K+ ISG GRCN++N + I A P G F S FS + +
Sbjct: 29 VILLEKTEQPGKKMLISGQGRCNISNSRDIAEFITA-FGPNGR--FLYSAFSRFFRQELV 85
Query: 137 SWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRK 196
+ +GVE KTE GR+FPVSD + V+ L A G L +G+ V+ GR
Sbjct: 86 DLLARYGVETKTERGGRLFPVSDKAHDVVAALTEYAS--GAALVSGQKVSQILVSE-GRV 142
Query: 197 FLLKVEKRTMNLVECIEAD--YLLIASGSSQQGHRLAAQLGHSIVDPVPSLFTFKIADSQ 254
+K EK T + A +GSS G RLA LGH+IV P+L + +
Sbjct: 143 VGVKTEKETFRADAAVIATGGASYPGTGSSGDGFRLAEALGHTIVKLRPALVPLVVKEID 202
Query: 255 LTE-LSGVSFPKV 266
L + + GV+ +
Sbjct: 203 LAKSMQGVALKNI 215
Score = 195 (73.7 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 53/184 (28%), Positives = 88/184 (47%)
Query: 283 TQVGPMLVTHWGLSGPVILRLSAWGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKI 342
+++G +++TH+GL GP+ + + A L + +D P L ++ ++ L +
Sbjct: 252 SRMGELMITHFGLGGPLTMLMGLPVAEALEQGAVS--VAIDLKPALSLDKLRLRLQRDFD 309
Query: 343 RFAKQKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVA 402
F K+ N L ++ + + G+ ++ I LK +
Sbjct: 310 TFGKRSFQNLLSE--LLPQKMIRPFVDLTGIDPFKCGGQITAAEREVILANLKCLRFNIT 367
Query: 403 GKGQFKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYI 462
VTAGGV L EI+ TMESK+ L+F GEV+++D TGG+N Q A+S GY+
Sbjct: 368 STLPLSAAVVTAGGVDLKEINPRTMESKLVKGLYFCGEVMDIDADTGGYNLQAAFSTGYL 427
Query: 463 AGTS 466
AG S
Sbjct: 428 AGES 431
Score = 38 (18.4 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 182 GKVVTTASSDNAGRKFLLKVEKR 204
GKV+ ++ G+K L+ + R
Sbjct: 27 GKVILLEKTEQPGKKMLISGQGR 49
>UNIPROTKB|Q48AK0 [details] [associations]
symbol:CPS_0145 "Putative uncharacterized protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG2081
HOGENOM:HOG000043046 KO:K07007 OMA:VMDVSGW Gene3D:1.10.8.260
InterPro:IPR004792 InterPro:IPR023166 Pfam:PF03486
TIGRFAMs:TIGR00275 RefSeq:YP_266913.1 ProteinModelPortal:Q48AK0
SMR:Q48AK0 STRING:Q48AK0 GeneID:3520475 KEGG:cps:CPS_0145
PATRIC:21463703 ProtClustDB:CLSK742443
BioCyc:CPSY167879:GI48-248-MONOMER Uniprot:Q48AK0
Length = 394
Score = 203 (76.5 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 56/181 (30%), Positives = 94/181 (51%)
Query: 288 MLVTHWGLSGPVILRLSA-WGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAK 346
+L TH GLSGP IL++S+ W A +T++ +P+ ++ + L Q + +
Sbjct: 228 ILFTHRGLSGPAILQISSFWRAGQA--------VTINLLPECNLSET---LIQWQNEQGQ 276
Query: 347 QKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQ 406
+ V N L KRF + +L ++G+ D +++ + +++ L ++ G
Sbjct: 277 KSVKNLLAT--LLPKRFVE-VLVKDGIIADKPIKQLNHPEITALSEYLHAWQIKPNGTEG 333
Query: 407 FKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTS 466
++ VT GGV E+S T ESK LFF GEV++V G GG+NFQ W+ GY G +
Sbjct: 334 YRTAEVTLGGVDTDELSSKTFESKKQQGLFFIGEVIDVTGWLGGYNFQFCWASGYACGQA 393
Query: 467 I 467
+
Sbjct: 394 V 394
Score = 191 (72.3 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 60/234 (25%), Positives = 111/234 (47%)
Query: 77 NVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDT 135
+VV+++ GK P KV ISGGGRCN TN + + L + P H F S S + D
Sbjct: 28 SVVVVDMGKKPARKVLISGGGRCNFTNENTTPENYLCQN-P--H--FAKSALSRYSAQDF 82
Query: 136 MSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGR 195
+ HG++ + G++F DS+ ++D L+TE + GV + V + + + G
Sbjct: 83 IDLVDRHGLKYHHKTLGQLF-CDDSAQDLVDILMTECEWAGVEVNLRSEVLSVTKIDDGY 141
Query: 196 KFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSIVDPVPSLFTFKIADSQL 255
+ + + G++ G+++A Q ++++ + +L F + +
Sbjct: 142 SVTTNDKSYQCKSLVVASGGLTMPKLGATPIGYKIAEQFDLNVLETLAALVPFTLHEHDK 201
Query: 256 TELSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSA-WGA 308
G+S ++ ++ E+ + + + L TH GLSGP IL++S+ W A
Sbjct: 202 QRFDGLSGISLLTEVTSED---GTSFKENI---LFTHRGLSGPAILQISSFWRA 249
>TIGR_CMR|CPS_0145 [details] [associations]
symbol:CPS_0145 "conserved hypothetical protein TIGR00275"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG2081
HOGENOM:HOG000043046 KO:K07007 OMA:VMDVSGW Gene3D:1.10.8.260
InterPro:IPR004792 InterPro:IPR023166 Pfam:PF03486
TIGRFAMs:TIGR00275 RefSeq:YP_266913.1 ProteinModelPortal:Q48AK0
SMR:Q48AK0 STRING:Q48AK0 GeneID:3520475 KEGG:cps:CPS_0145
PATRIC:21463703 ProtClustDB:CLSK742443
BioCyc:CPSY167879:GI48-248-MONOMER Uniprot:Q48AK0
Length = 394
Score = 203 (76.5 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 56/181 (30%), Positives = 94/181 (51%)
Query: 288 MLVTHWGLSGPVILRLSA-WGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAK 346
+L TH GLSGP IL++S+ W A +T++ +P+ ++ + L Q + +
Sbjct: 228 ILFTHRGLSGPAILQISSFWRAGQA--------VTINLLPECNLSET---LIQWQNEQGQ 276
Query: 347 QKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQ 406
+ V N L KRF + +L ++G+ D +++ + +++ L ++ G
Sbjct: 277 KSVKNLLAT--LLPKRFVE-VLVKDGIIADKPIKQLNHPEITALSEYLHAWQIKPNGTEG 333
Query: 407 FKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTS 466
++ VT GGV E+S T ESK LFF GEV++V G GG+NFQ W+ GY G +
Sbjct: 334 YRTAEVTLGGVDTDELSSKTFESKKQQGLFFIGEVIDVTGWLGGYNFQFCWASGYACGQA 393
Query: 467 I 467
+
Sbjct: 394 V 394
Score = 191 (72.3 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 60/234 (25%), Positives = 111/234 (47%)
Query: 77 NVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDT 135
+VV+++ GK P KV ISGGGRCN TN + + L + P H F S S + D
Sbjct: 28 SVVVVDMGKKPARKVLISGGGRCNFTNENTTPENYLCQN-P--H--FAKSALSRYSAQDF 82
Query: 136 MSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGR 195
+ HG++ + G++F DS+ ++D L+TE + GV + V + + + G
Sbjct: 83 IDLVDRHGLKYHHKTLGQLF-CDDSAQDLVDILMTECEWAGVEVNLRSEVLSVTKIDDGY 141
Query: 196 KFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSIVDPVPSLFTFKIADSQL 255
+ + + G++ G+++A Q ++++ + +L F + +
Sbjct: 142 SVTTNDKSYQCKSLVVASGGLTMPKLGATPIGYKIAEQFDLNVLETLAALVPFTLHEHDK 201
Query: 256 TELSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSA-WGA 308
G+S ++ ++ E+ + + + L TH GLSGP IL++S+ W A
Sbjct: 202 QRFDGLSGISLLTEVTSED---GTSFKENI---LFTHRGLSGPAILQISSFWRA 249
>UNIPROTKB|Q5LU70 [details] [associations]
symbol:SPO1188 "Uncharacterized protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR013027
PRINTS:PR00368 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0055114 HOGENOM:HOG000043046 KO:K07007 OMA:VMDVSGW
Gene3D:1.10.8.260 InterPro:IPR004792 InterPro:IPR023166
Pfam:PF03486 TIGRFAMs:TIGR00275 RefSeq:YP_166435.1
ProteinModelPortal:Q5LU70 GeneID:3194363 KEGG:sil:SPO1188
PATRIC:23375681 ProtClustDB:CLSK933460 Uniprot:Q5LU70
Length = 406
Score = 201 (75.8 bits), Expect = 6.6e-27, Sum P(2) = 6.6e-27
Identities = 55/182 (30%), Positives = 91/182 (50%)
Query: 288 MLVTHWGLSGPVILRLSAWGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAKQ 347
+L TH GLSGP +L+LS++ + +D PD +D+ + L + ++
Sbjct: 236 LLFTHRGLSGPAVLQLSSYWRE-------GEEIAIDLAPD---QDLFAALRDQRQAAGRR 285
Query: 348 KVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQF 407
+ L R +++ + GL G A S+++L ++A L+ L +G +
Sbjct: 286 DLTTELARH--LPARLVEFLAPQLGLKGRL--ADQSDSALRALAETLRDWRLTPSGTEGY 341
Query: 408 KDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSI 467
+ VT GG+ + T+ SK P L+ GE ++V G GG+NFQ AWS G+ AGT+I
Sbjct: 342 RTAEVTLGGIDTDMLDSRTLRSKSQPGLYAIGEAVDVTGWLGGYNFQWAWSSGHAAGTAI 401
Query: 468 GK 469
K
Sbjct: 402 AK 403
Score = 171 (65.3 bits), Expect = 6.6e-27, Sum P(2) = 6.6e-27
Identities = 65/229 (28%), Positives = 107/229 (46%)
Query: 86 PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTMSWFSDHGVE 145
P K++ISGGGRCN TN + + L+ + P H F S + + D + + H +
Sbjct: 46 PGEKIRISGGGRCNFTNMYAEPENFLSQN-P--H--FCKSALARYTQWDFIDLMNRHHIA 100
Query: 146 LKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRT 205
+ G++F + S+ VI LL+E + G L + S +A +F L VE+
Sbjct: 101 WHEKTLGQLF-CNGSAKQVISMLLSEMERAGATLWLSTTLKDLS--HADGRFSLTVERE- 156
Query: 206 MNLVECIEADYLLIASGSS---QQG-----HRLAAQLGHSIVDPVPSLFTFKIADSQLTE 257
E + A L++A+G + G + +A Q G + + L F +S+
Sbjct: 157 -GRTEHLSARNLVLATGGKSIPKMGATGLAYDIARQFGLGVTETRAGLVPFTFPESRFAP 215
Query: 258 LSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAW 306
L+G+S P +L N + T +L TH GLSGP +L+LS++
Sbjct: 216 LAGLSLPA-----RLSNARA-----TFDEALLFTHRGLSGPAVLQLSSY 254
>TIGR_CMR|SPO_1188 [details] [associations]
symbol:SPO_1188 "conserved hypothetical protein TIGR00275"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR013027 PRINTS:PR00368 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0055114 HOGENOM:HOG000043046
KO:K07007 OMA:VMDVSGW Gene3D:1.10.8.260 InterPro:IPR004792
InterPro:IPR023166 Pfam:PF03486 TIGRFAMs:TIGR00275
RefSeq:YP_166435.1 ProteinModelPortal:Q5LU70 GeneID:3194363
KEGG:sil:SPO1188 PATRIC:23375681 ProtClustDB:CLSK933460
Uniprot:Q5LU70
Length = 406
Score = 201 (75.8 bits), Expect = 6.6e-27, Sum P(2) = 6.6e-27
Identities = 55/182 (30%), Positives = 91/182 (50%)
Query: 288 MLVTHWGLSGPVILRLSAWGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAKQ 347
+L TH GLSGP +L+LS++ + +D PD +D+ + L + ++
Sbjct: 236 LLFTHRGLSGPAVLQLSSYWRE-------GEEIAIDLAPD---QDLFAALRDQRQAAGRR 285
Query: 348 KVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQF 407
+ L R +++ + GL G A S+++L ++A L+ L +G +
Sbjct: 286 DLTTELARH--LPARLVEFLAPQLGLKGRL--ADQSDSALRALAETLRDWRLTPSGTEGY 341
Query: 408 KDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSI 467
+ VT GG+ + T+ SK P L+ GE ++V G GG+NFQ AWS G+ AGT+I
Sbjct: 342 RTAEVTLGGIDTDMLDSRTLRSKSQPGLYAIGEAVDVTGWLGGYNFQWAWSSGHAAGTAI 401
Query: 468 GK 469
K
Sbjct: 402 AK 403
Score = 171 (65.3 bits), Expect = 6.6e-27, Sum P(2) = 6.6e-27
Identities = 65/229 (28%), Positives = 107/229 (46%)
Query: 86 PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTMSWFSDHGVE 145
P K++ISGGGRCN TN + + L+ + P H F S + + D + + H +
Sbjct: 46 PGEKIRISGGGRCNFTNMYAEPENFLSQN-P--H--FCKSALARYTQWDFIDLMNRHHIA 100
Query: 146 LKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRT 205
+ G++F + S+ VI LL+E + G L + S +A +F L VE+
Sbjct: 101 WHEKTLGQLF-CNGSAKQVISMLLSEMERAGATLWLSTTLKDLS--HADGRFSLTVERE- 156
Query: 206 MNLVECIEADYLLIASGSS---QQG-----HRLAAQLGHSIVDPVPSLFTFKIADSQLTE 257
E + A L++A+G + G + +A Q G + + L F +S+
Sbjct: 157 -GRTEHLSARNLVLATGGKSIPKMGATGLAYDIARQFGLGVTETRAGLVPFTFPESRFAP 215
Query: 258 LSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAW 306
L+G+S P +L N + T +L TH GLSGP +L+LS++
Sbjct: 216 LAGLSLPA-----RLSNARA-----TFDEALLFTHRGLSGPAVLQLSSY 254
>UNIPROTKB|Q8EKN8 [details] [associations]
symbol:yhiN "HI0933 family flavoprotein YhiN"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR013027 PRINTS:PR00368 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0055114 HOGENOM:HOG000043046
KO:K07007 OMA:VMDVSGW Gene3D:1.10.8.260 InterPro:IPR004792
InterPro:IPR023166 Pfam:PF03486 TIGRFAMs:TIGR00275
RefSeq:NP_715696.2 ProteinModelPortal:Q8EKN8 SMR:Q8EKN8
GeneID:1167953 KEGG:son:SO_0054 PATRIC:23519807
ProtClustDB:CLSK905568 Uniprot:Q8EKN8
Length = 394
Score = 188 (71.2 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 67/240 (27%), Positives = 112/240 (46%)
Query: 77 NVVIIEKGKPLS-KVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDT 135
+V++++ K K+ ISGGGRCN TN + ++ G+ F S + +
Sbjct: 28 DVLVLDNAKQAGRKILISGGGRCNFTN-----LKVEPANFICGNPHFVKSALARYPSQQF 82
Query: 136 MSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGR 195
+ HG+E D G++F +DS+ ++ LLTE + GV ++ + + + AGR
Sbjct: 83 IELVERHGIEYHERDHGQLF-CNDSAKEIVTMLLTECEWAGVSIKLRTDILSVGKNEAGR 141
Query: 196 KFLLKVEKRTMNLVECIEADYLLIAS--GSSQQGHRLAAQLGHSIVDPVPSL--FTFKIA 251
F L ++ + A L G++ G++LA Q G ++ L FT+
Sbjct: 142 -FELNTSNGELSCDSLVIATGGLSMPKLGATPYGYQLAEQFGLKVLPTHAGLVPFTWHSE 200
Query: 252 DS-QLTELSGVSFP-KVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSA-WGA 308
D + LSG++ P ++ AK + S +L TH GLSGP IL++S W A
Sbjct: 201 DKIRFEPLSGIAVPSRITAK---DGTAFSEA-------LLFTHRGLSGPAILQISNYWKA 250
Score = 179 (68.1 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 60/181 (33%), Positives = 87/181 (48%)
Query: 288 MLVTHWGLSGPVILRLSA-WGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAK 346
+L TH GLSGP IL++S W A + ++ +P++ D + Q K
Sbjct: 229 LLFTHRGLSGPAILQISNYWKAGET--------IKINLLPNM---DAAQAIEQQLAAHPK 277
Query: 347 QKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQ 406
Q + N+ L KR + +L E L L V + + L T+ + G
Sbjct: 278 QSLRNTL--SLWLPKRLVE-VLFDEVLLNKALNQLV-HAERAKLVDDLHRWTVLMNGTEG 333
Query: 407 FKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTS 466
++ VT GGV E+S TME+ P LFF GEV++V G GGFNFQ AW+ G AG +
Sbjct: 334 YRTAEVTLGGVDTHELSSKTMEAIKVPGLFFIGEVMDVSGWLGGFNFQWAWASGVAAGKA 393
Query: 467 I 467
+
Sbjct: 394 V 394
>TIGR_CMR|SO_0054 [details] [associations]
symbol:SO_0054 "conserved hypothetical protein TIGR00275"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR013027 PRINTS:PR00368 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0055114 HOGENOM:HOG000043046
KO:K07007 OMA:VMDVSGW Gene3D:1.10.8.260 InterPro:IPR004792
InterPro:IPR023166 Pfam:PF03486 TIGRFAMs:TIGR00275
RefSeq:NP_715696.2 ProteinModelPortal:Q8EKN8 SMR:Q8EKN8
GeneID:1167953 KEGG:son:SO_0054 PATRIC:23519807
ProtClustDB:CLSK905568 Uniprot:Q8EKN8
Length = 394
Score = 188 (71.2 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 67/240 (27%), Positives = 112/240 (46%)
Query: 77 NVVIIEKGKPLS-KVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDT 135
+V++++ K K+ ISGGGRCN TN + ++ G+ F S + +
Sbjct: 28 DVLVLDNAKQAGRKILISGGGRCNFTN-----LKVEPANFICGNPHFVKSALARYPSQQF 82
Query: 136 MSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGR 195
+ HG+E D G++F +DS+ ++ LLTE + GV ++ + + + AGR
Sbjct: 83 IELVERHGIEYHERDHGQLF-CNDSAKEIVTMLLTECEWAGVSIKLRTDILSVGKNEAGR 141
Query: 196 KFLLKVEKRTMNLVECIEADYLLIAS--GSSQQGHRLAAQLGHSIVDPVPSL--FTFKIA 251
F L ++ + A L G++ G++LA Q G ++ L FT+
Sbjct: 142 -FELNTSNGELSCDSLVIATGGLSMPKLGATPYGYQLAEQFGLKVLPTHAGLVPFTWHSE 200
Query: 252 DS-QLTELSGVSFP-KVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSA-WGA 308
D + LSG++ P ++ AK + S +L TH GLSGP IL++S W A
Sbjct: 201 DKIRFEPLSGIAVPSRITAK---DGTAFSEA-------LLFTHRGLSGPAILQISNYWKA 250
Score = 179 (68.1 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 60/181 (33%), Positives = 87/181 (48%)
Query: 288 MLVTHWGLSGPVILRLSA-WGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAK 346
+L TH GLSGP IL++S W A + ++ +P++ D + Q K
Sbjct: 229 LLFTHRGLSGPAILQISNYWKAGET--------IKINLLPNM---DAAQAIEQQLAAHPK 277
Query: 347 QKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQ 406
Q + N+ L KR + +L E L L V + + L T+ + G
Sbjct: 278 QSLRNTL--SLWLPKRLVE-VLFDEVLLNKALNQLV-HAERAKLVDDLHRWTVLMNGTEG 333
Query: 407 FKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTS 466
++ VT GGV E+S TME+ P LFF GEV++V G GGFNFQ AW+ G AG +
Sbjct: 334 YRTAEVTLGGVDTHELSSKTMEAIKVPGLFFIGEVMDVSGWLGGFNFQWAWASGVAAGKA 393
Query: 467 I 467
+
Sbjct: 394 V 394
>UNIPROTKB|P37631 [details] [associations]
symbol:yhiN "predicted oxidoreductase with
FAD/NAD(P)-binding domain" species:83333 "Escherichia coli K-12"
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR013027 PRINTS:PR00368 EMBL:U00039 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0055114 PIR:G65146 RefSeq:NP_417949.1 RefSeq:YP_491943.1
ProteinModelPortal:P37631 SMR:P37631 DIP:DIP-12368N IntAct:P37631
PRIDE:P37631 EnsemblBacteria:EBESCT00000001131
EnsemblBacteria:EBESCT00000015831 GeneID:12933102 GeneID:947996
KEGG:ecj:Y75_p3685 KEGG:eco:b3492 PATRIC:32122432 EchoBASE:EB2141
EcoGene:EG12229 eggNOG:COG2081 HOGENOM:HOG000043046 KO:K07007
OMA:VMDVSGW ProtClustDB:CLSK880687 BioCyc:EcoCyc:EG12229-MONOMER
BioCyc:ECOL316407:JW3459-MONOMER Genevestigator:P37631
Gene3D:1.10.8.260 InterPro:IPR004792 InterPro:IPR023166
Pfam:PF03486 TIGRFAMs:TIGR00275 Uniprot:P37631
Length = 400
Score = 187 (70.9 bits), Expect = 6.6e-26, Sum P(2) = 6.6e-26
Identities = 64/235 (27%), Positives = 111/235 (47%)
Query: 78 VVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTM 136
V++I+ GK P K+ +SGGGRCN TN + + G Y + F S + D +
Sbjct: 29 VLLIDNGKKPGRKILMSGGGRCNFTNLY-----VEPGAYLSQNPHFCKSALARFTQWDFI 83
Query: 137 SWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRK 196
+ HG+ + G++F DS+ ++D L+ E + V + V + + D G
Sbjct: 84 DLVNKHGIAWHEKTLGQLF-CDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETG-- 140
Query: 197 FLLKVEKRTMNLVECIEAD--YLLIASGSSQQGHRLAAQLGHSIVDPVPSLFTFKIADSQ 254
F L + T+ + + A + G+S G+++A Q G +++ L F +
Sbjct: 141 FTLDLNGMTVGCEKLVIATGGLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPL 200
Query: 255 LTEL---SGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAW 306
L EL +GV+ P V+ EN + + +L TH GLSGP +L++S++
Sbjct: 201 LEELQVLAGVAVPSVITA---EN---GTVFREN---LLFTHRGLSGPAVLQISSY 246
Score = 177 (67.4 bits), Expect = 6.6e-26, Sum P(2) = 6.6e-26
Identities = 52/174 (29%), Positives = 89/174 (51%)
Query: 288 MLVTHWGLSGPVILRLSAWGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAKQ 347
+L TH GLSGP +L++S++ F S ++ +PD+ D+++ L++ + Q
Sbjct: 228 LLFTHRGLSGPAVLQISSYWQPGEFVS-------INLLPDV---DLETFLNEQRNAHPNQ 277
Query: 348 KVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQF 407
+ N+ L KR + L + G D ++ ++ L ++ G +
Sbjct: 278 SLKNTLAVH--LPKRLVER-LQQLGQIPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGY 334
Query: 408 KDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGY 461
+ VT GGV +E+S TME++ P L+F GEV++V G GG+NFQ AWS +
Sbjct: 335 RTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAW 388
>UNIPROTKB|Q87VD1 [details] [associations]
symbol:PSPTO_5008 "Uncharacterized protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR013027 PRINTS:PR00368 GO:GO:0055114 EMBL:AE016853
GenomeReviews:AE016853_GR eggNOG:COG2081 HOGENOM:HOG000043046
KO:K07007 OMA:VMDVSGW Gene3D:1.10.8.260 InterPro:IPR004792
InterPro:IPR023166 Pfam:PF03486 TIGRFAMs:TIGR00275
ProtClustDB:CLSK865951 RefSeq:NP_794741.1 ProteinModelPortal:Q87VD1
GeneID:1186693 KEGG:pst:PSPTO_5008 PATRIC:20001544
BioCyc:PSYR223283:GJIX-5076-MONOMER Uniprot:Q87VD1
Length = 392
Score = 175 (66.7 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 68/236 (28%), Positives = 112/236 (47%)
Query: 78 VVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTM 136
V++I+ KP K+ +SGGGRCN TN + L+ + H F S + + D +
Sbjct: 29 VMLIDHANKPGKKILMSGGGRCNFTNMYTEPANFLSQN---SH--FCKSALARYTQWDFI 83
Query: 137 SWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRK 196
+ + HGV + G++F + SS +++ LL E + GV L V +G
Sbjct: 84 ALVAKHGVPYHEKKLGQLF-CDNKSSDILEMLLEECRQAGVSLHMDTSVQQIDKTESG-- 140
Query: 197 FLLKVEKRTMNLVECIEADY-LLIAS-GSSQQGHRLAAQLGHSIVDPVPSLFTFKIADS- 253
+ L T++ + A L I + G++ G+++ Q GH+++ L F I D
Sbjct: 141 YSLHTTLGTLSCESLVIATGGLSIPTLGATGFGYQVGKQFGHTLLPTRAGLVPFTITDQL 200
Query: 254 -QL-TELSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSA-W 306
+L TELSG S +V+ + + + L TH GLSGP IL++S+ W
Sbjct: 201 KELCTELSGTSVDCLVSC-------HDTSFRENI---LFTHRGLSGPAILQISSFW 246
Score = 172 (65.6 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 58/177 (32%), Positives = 84/177 (47%)
Query: 288 MLVTHWGLSGPVILRLSA-WGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAK 346
+L TH GLSGP IL++S+ W + ++ +PD H D+ + L+Q +
Sbjct: 227 ILFTHRGLSGPAILQISSFWQPG--------DTVEINLLPD-H--DVPAWLTQQQAERPN 275
Query: 347 QKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQ 406
+ L + E K+ I +S ++ L IA L + AG
Sbjct: 276 SE-LKTLLGEI-FTKKMANLIAEHWFVSRPM--KQYTHAELADIAEKLASWKVVPAGTEG 331
Query: 407 FKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIA 463
++ VT GG+ E+S TMES P L+F GEVL+V G GGFNFQ AW+ Y A
Sbjct: 332 YRTAEVTLGGIDTREVSSKTMESLKSPGLYFVGEVLDVSGHLGGFNFQWAWASAYAA 388
>UNIPROTKB|Q48P62 [details] [associations]
symbol:PSPPH_0505 "Uncharacterized protein" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR013027 PRINTS:PR00368 GO:GO:0055114 EMBL:CP000058
GenomeReviews:CP000058_GR eggNOG:COG2081 HOGENOM:HOG000043046
KO:K07007 OMA:VMDVSGW Gene3D:1.10.8.260 InterPro:IPR004792
InterPro:IPR023166 Pfam:PF03486 TIGRFAMs:TIGR00275
RefSeq:YP_272807.1 ProteinModelPortal:Q48P62 STRING:Q48P62
GeneID:3556322 KEGG:psp:PSPPH_0505 PATRIC:19970048
ProtClustDB:CLSK865951 Uniprot:Q48P62
Length = 405
Score = 179 (68.1 bits), Expect = 6.8e-24, Sum P(2) = 6.8e-24
Identities = 69/236 (29%), Positives = 114/236 (48%)
Query: 78 VVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTM 136
V++I+ KP K+ +SGGGRCN TN + L+ + P H F S + + D +
Sbjct: 42 VILIDHANKPGKKILMSGGGRCNFTNMYIEPANFLSQN-P--H--FCKSALARYTQWDFI 96
Query: 137 SWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRK 196
+ + HGV + G++F + SS +++ LL E + GV L V +G
Sbjct: 97 AMVAKHGVPYHEKKLGQLF-CDNKSSDILEMLLEECRQAGVSLHMDTSVQQIDKTESG-- 153
Query: 197 FLLKVEKRTMNLVECIEADY-LLIAS-GSSQQGHRLAAQLGHSIVDPVPSLFTFKIADS- 253
+ L+ T++ + A L I + G++ G+++ Q GH+++ L F I D
Sbjct: 154 YSLQTTLGTLSCEALVIATGGLSIPTLGATGFGYQVGKQFGHTLLPTRAGLVPFTITDQL 213
Query: 254 -QL-TELSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSA-W 306
+L TELSG S +V+ + + + L TH GLSGP IL++S+ W
Sbjct: 214 KELCTELSGTSVDCLVSC-------NDTSFRENI---LFTHRGLSGPAILQISSFW 259
Score = 167 (63.8 bits), Expect = 6.8e-24, Sum P(2) = 6.8e-24
Identities = 57/177 (32%), Positives = 81/177 (45%)
Query: 288 MLVTHWGLSGPVILRLSA-WGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAK 346
+L TH GLSGP IL++S+ W + ++ +PD H D+ + LSQ +
Sbjct: 240 ILFTHRGLSGPAILQISSFWQPG--------DTVEINLLPD-H--DVPAWLSQQQAERPN 288
Query: 347 QKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQ 406
++ F K I +S ++ L IA L + G
Sbjct: 289 SELKTLLGEVF--TKNMANLITEHWFVSKPM--KQYTHAELADIADKLASWKVVPGGTEG 344
Query: 407 FKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIA 463
++ VT GG+ E+S TMES P L+F GEVL+V G GGFNFQ AW+ Y A
Sbjct: 345 YRTAEVTLGGIDTREVSSKTMESLKSPGLYFVGEVLDVSGHLGGFNFQWAWASAYAA 401
>UNIPROTKB|Q4K4K2 [details] [associations]
symbol:PFL_5773 "Pyridine nucleotide-disulfide
oxidoreductase" species:220664 "Pseudomonas protegens Pf-5"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR013027 PRINTS:PR00368 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0055114 eggNOG:COG2081
HOGENOM:HOG000043046 KO:K07007 OMA:VMDVSGW Gene3D:1.10.8.260
InterPro:IPR004792 InterPro:IPR023166 Pfam:PF03486
TIGRFAMs:TIGR00275 ProtClustDB:CLSK865951 RefSeq:YP_262831.1
ProteinModelPortal:Q4K4K2 SMR:Q4K4K2 STRING:Q4K4K2 GeneID:3480145
KEGG:pfl:PFL_5773 PATRIC:19881051
BioCyc:PFLU220664:GIX8-5813-MONOMER Uniprot:Q4K4K2
Length = 392
Score = 169 (64.5 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 61/181 (33%), Positives = 86/181 (47%)
Query: 288 MLVTHWGLSGPVILRLSAWGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAKQ 347
+L TH GLSGP IL++S++ + ++ +PD H D L Q +
Sbjct: 227 ILFTHRGLSGPAILQISSYWQP-------GDSVEINLLPD-H--DALGWLQQQQAERPNS 276
Query: 348 KVLNSCPPEFCLVKRFWKYILGREGLSGDTLWAS-----VSNNSLISIARLLKHCTLEVA 402
++ + L + F K + G L D + S + L +A+ L L A
Sbjct: 277 EL------KTLLGEIFTKKMAG---LLADHWFVSKPMKQYTPAELADVAQKLGSWQLVPA 327
Query: 403 GKGQFKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYI 462
G ++ VT GGV E+S TMES P L+F GEVL+V G GGFNFQ AW+ GY
Sbjct: 328 GTEGYRTAEVTLGGVDTREVSSKTMESLKSPGLYFIGEVLDVTGHLGGFNFQWAWASGYA 387
Query: 463 A 463
A
Sbjct: 388 A 388
Score = 166 (63.5 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 71/238 (29%), Positives = 113/238 (47%)
Query: 78 VVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTM 136
V++++ K K+ +SGGGRCN TN + L+ + P H F S + + D +
Sbjct: 29 VLLLDHANKAGKKILMSGGGRCNFTNMYTEPANFLSQN-P--H--FCKSALARYTQWDFI 83
Query: 137 SWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRK 196
+ HGV + G++F + SS ++ LL E GV L+ + T +G
Sbjct: 84 GLVAKHGVPYHEKKLGQLF-CDNKSSDILGMLLDECDQVGVELRLDTSIQTIEKVESG-- 140
Query: 197 FLLKVEKRTMNLVEC----IEADYLLIAS-GSSQQGHRLAAQLGHSIVDPVPSLFTFKIA 251
+LL T+ V+C I L I + G++ G+++A Q GH ++ L F I
Sbjct: 141 YLLDT---TLGQVQCQSLVIATGGLSIPTLGATGFGYQVAKQFGHELLPTRAGLVPFTIT 197
Query: 252 DS--QL-TELSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAW 306
D +L +ELSG S +V+ N Q + L TH GLSGP IL++S++
Sbjct: 198 DQLKELCSELSGTSVDCLVSC----NDQSFRENI------LFTHRGLSGPAILQISSY 245
>UNIPROTKB|Q3Z9X5 [details] [associations]
symbol:DET0226 "Putative uncharacterized protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000027 GenomeReviews:CP000027_GR HOGENOM:HOG000043048
eggNOG:COG2081 KO:K07007 InterPro:IPR004792 Pfam:PF03486
TIGRFAMs:TIGR00275 RefSeq:YP_180974.1 ProteinModelPortal:Q3Z9X5
STRING:Q3Z9X5 GeneID:3230447 KEGG:det:DET0226 PATRIC:21607527
OMA:GRIFPFT ProtClustDB:CLSK837562
BioCyc:DETH243164:GJNF-226-MONOMER Uniprot:Q3Z9X5
Length = 379
Score = 219 (82.2 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 77/289 (26%), Positives = 140/289 (48%)
Query: 78 VVIIEKGKPLSK-VKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTM 136
V+I+EK L K + SG GRCN+ N + + + Y + S FS G + +
Sbjct: 14 VIILEKTVQLGKKILASGNGRCNLLN-----EQLDSSFYNPEARPLVNSVFSRFGRNEIL 68
Query: 137 SWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTG-KVVTTASSDNAGR 195
++FS+ G+ ++D GR+FP ++ ++SV+ L E + GV ++ G ++ + N
Sbjct: 69 NFFSELGLHYYSQD-GRIFPFTNQAASVLKVLEMEIRRLGVKVEYGFDCLSIRKTQNGFS 127
Query: 196 KFLLKVEKRT-MNLVECIEADYLLIASGSSQQGHRLAAQLGHSIVDPVPSLFTFKIADSQ 254
++T NL+ A GS G++LAA LGH I+ P+PS + D
Sbjct: 128 LQAADGRQQTGQNLI-LTGGGCTYPAFGSDGSGYKLAASLGHRIIKPIPSTVPLVVKDPI 186
Query: 255 LTELSGVSFPKVVAKLKLENVQRSSPYLTQV-GPMLVTHWGLSGPVILRLSAWGARYLFS 313
L G +++A+ + + T V G +L T +GLSG +IL +S + +
Sbjct: 187 CHLLQG---QRIIARAQSRIRDKVG---TPVDGELLFTKYGLSGSLILDISQEISLAINR 240
Query: 314 SCYKGM-LTVDFVPDLHIEDMQS-ILSQHKIRFAKQKVLNSC-PPEFCL 359
K + L +D +P + + M++ +L + K + +++L P + C+
Sbjct: 241 LNIKDVSLGIDLIPFIEPKQMETELLKRRKTGLSPEEMLTGILPNKLCV 289
Score = 194 (73.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 60/182 (32%), Positives = 98/182 (53%)
Query: 286 GPMLVTHWGLSGPVILRLSAWGARYLFSSCYKGM-LTVDFVPDLHIEDMQS-ILSQHKIR 343
G +L T +GLSG +IL +S + + K + L +D +P + + M++ +L + K
Sbjct: 213 GELLFTKYGLSGSLILDISQEISLAINRLNIKDVSLGIDLIPFIEPKQMETELLKRRKTG 272
Query: 344 FAKQKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAG 403
+ +++L P V +K + ++ N + A+L K+ EV+G
Sbjct: 273 LSPEEMLTGILPNKLCVA--FKQLFEKD-------------NPAKAAAKL-KNWRFEVSG 316
Query: 404 -KGQFKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYI 462
+G + EF TAGG+ EI + T+ESK+ L+ AGEVL+V+GV GG+N AW+ GYI
Sbjct: 317 TRGWNEAEF-TAGGIDTGEIDIQTLESKLVKGLYLAGEVLDVNGVRGGYNLGWAWASGYI 375
Query: 463 AG 464
AG
Sbjct: 376 AG 377
>TIGR_CMR|DET_0226 [details] [associations]
symbol:DET_0226 "conserved hypothetical protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000027 GenomeReviews:CP000027_GR HOGENOM:HOG000043048
eggNOG:COG2081 KO:K07007 InterPro:IPR004792 Pfam:PF03486
TIGRFAMs:TIGR00275 RefSeq:YP_180974.1 ProteinModelPortal:Q3Z9X5
STRING:Q3Z9X5 GeneID:3230447 KEGG:det:DET0226 PATRIC:21607527
OMA:GRIFPFT ProtClustDB:CLSK837562
BioCyc:DETH243164:GJNF-226-MONOMER Uniprot:Q3Z9X5
Length = 379
Score = 219 (82.2 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 77/289 (26%), Positives = 140/289 (48%)
Query: 78 VVIIEKGKPLSK-VKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTM 136
V+I+EK L K + SG GRCN+ N + + + Y + S FS G + +
Sbjct: 14 VIILEKTVQLGKKILASGNGRCNLLN-----EQLDSSFYNPEARPLVNSVFSRFGRNEIL 68
Query: 137 SWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTG-KVVTTASSDNAGR 195
++FS+ G+ ++D GR+FP ++ ++SV+ L E + GV ++ G ++ + N
Sbjct: 69 NFFSELGLHYYSQD-GRIFPFTNQAASVLKVLEMEIRRLGVKVEYGFDCLSIRKTQNGFS 127
Query: 196 KFLLKVEKRT-MNLVECIEADYLLIASGSSQQGHRLAAQLGHSIVDPVPSLFTFKIADSQ 254
++T NL+ A GS G++LAA LGH I+ P+PS + D
Sbjct: 128 LQAADGRQQTGQNLI-LTGGGCTYPAFGSDGSGYKLAASLGHRIIKPIPSTVPLVVKDPI 186
Query: 255 LTELSGVSFPKVVAKLKLENVQRSSPYLTQV-GPMLVTHWGLSGPVILRLSAWGARYLFS 313
L G +++A+ + + T V G +L T +GLSG +IL +S + +
Sbjct: 187 CHLLQG---QRIIARAQSRIRDKVG---TPVDGELLFTKYGLSGSLILDISQEISLAINR 240
Query: 314 SCYKGM-LTVDFVPDLHIEDMQS-ILSQHKIRFAKQKVLNSC-PPEFCL 359
K + L +D +P + + M++ +L + K + +++L P + C+
Sbjct: 241 LNIKDVSLGIDLIPFIEPKQMETELLKRRKTGLSPEEMLTGILPNKLCV 289
Score = 194 (73.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 60/182 (32%), Positives = 98/182 (53%)
Query: 286 GPMLVTHWGLSGPVILRLSAWGARYLFSSCYKGM-LTVDFVPDLHIEDMQS-ILSQHKIR 343
G +L T +GLSG +IL +S + + K + L +D +P + + M++ +L + K
Sbjct: 213 GELLFTKYGLSGSLILDISQEISLAINRLNIKDVSLGIDLIPFIEPKQMETELLKRRKTG 272
Query: 344 FAKQKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAG 403
+ +++L P V +K + ++ N + A+L K+ EV+G
Sbjct: 273 LSPEEMLTGILPNKLCVA--FKQLFEKD-------------NPAKAAAKL-KNWRFEVSG 316
Query: 404 -KGQFKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYI 462
+G + EF TAGG+ EI + T+ESK+ L+ AGEVL+V+GV GG+N AW+ GYI
Sbjct: 317 TRGWNEAEF-TAGGIDTGEIDIQTLESKLVKGLYLAGEVLDVNGVRGGYNLGWAWASGYI 375
Query: 463 AG 464
AG
Sbjct: 376 AG 377
>UNIPROTKB|Q5LMX6 [details] [associations]
symbol:SPO3436 "Uncharacterized protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003042
PRINTS:PR00420 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0016491 GO:GO:0055114 KO:K07007 InterPro:IPR004792
Pfam:PF03486 TIGRFAMs:TIGR00275 RefSeq:YP_168632.1
ProteinModelPortal:Q5LMX6 GeneID:3195635 KEGG:sil:SPO3436
PATRIC:23380333 HOGENOM:HOG000043047 OMA:YDAMPSV
ProtClustDB:CLSK868342 InterPro:IPR022460 TIGRFAMs:TIGR03862
Uniprot:Q5LMX6
Length = 399
Score = 82 (33.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 389 SIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVT 448
++A L+K ++ AG + TAGGV + + M + + P F AGE+L+ + T
Sbjct: 309 ALAALIKRLPVQHAGLRPMDEAISTAGGVARAALDDGLMLNAL-PGTFCAGEMLDWEAPT 367
Query: 449 GGFNFQNAWSGGYIAG 464
GG+ + G AG
Sbjct: 368 GGYLLTGCLATGRWAG 383
Score = 78 (32.5 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 27/105 (25%), Positives = 44/105 (41%)
Query: 79 VIIEKGKP--LSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTM 136
V++ + KP K ++G N+T ++++ A Y R +
Sbjct: 27 VLVAEAKPSVARKFLMAGKSGLNLTKDEPLERLLAA--YGDAADWLR-PMLAAFDAQAVQ 83
Query: 137 SWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQT 181
W D G EL T GRVFP + +S ++ L E GV ++T
Sbjct: 84 DWARDLGQELFTGSTGRVFPTAMKASPLLRAWLAELAGLGVEIRT 128
>TIGR_CMR|SPO_3436 [details] [associations]
symbol:SPO_3436 "conserved hypothetical protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003042 PRINTS:PR00420 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0055114 KO:K07007
InterPro:IPR004792 Pfam:PF03486 TIGRFAMs:TIGR00275
RefSeq:YP_168632.1 ProteinModelPortal:Q5LMX6 GeneID:3195635
KEGG:sil:SPO3436 PATRIC:23380333 HOGENOM:HOG000043047 OMA:YDAMPSV
ProtClustDB:CLSK868342 InterPro:IPR022460 TIGRFAMs:TIGR03862
Uniprot:Q5LMX6
Length = 399
Score = 82 (33.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 389 SIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVT 448
++A L+K ++ AG + TAGGV + + M + + P F AGE+L+ + T
Sbjct: 309 ALAALIKRLPVQHAGLRPMDEAISTAGGVARAALDDGLMLNAL-PGTFCAGEMLDWEAPT 367
Query: 449 GGFNFQNAWSGGYIAG 464
GG+ + G AG
Sbjct: 368 GGYLLTGCLATGRWAG 383
Score = 78 (32.5 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 27/105 (25%), Positives = 44/105 (41%)
Query: 79 VIIEKGKP--LSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTM 136
V++ + KP K ++G N+T ++++ A Y R +
Sbjct: 27 VLVAEAKPSVARKFLMAGKSGLNLTKDEPLERLLAA--YGDAADWLR-PMLAAFDAQAVQ 83
Query: 137 SWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQT 181
W D G EL T GRVFP + +S ++ L E GV ++T
Sbjct: 84 DWARDLGQELFTGSTGRVFPTAMKASPLLRAWLAELAGLGVEIRT 128
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 481 468 0.00098 118 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 620 (66 KB)
Total size of DFA: 272 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.48u 0.11s 34.59t Elapsed: 00:00:02
Total cpu time: 34.49u 0.11s 34.60t Elapsed: 00:00:02
Start: Sat May 11 01:37:00 2013 End: Sat May 11 01:37:02 2013