BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011610
(481 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q795R8|YTFP_BACSU Uncharacterized protein YtfP OS=Bacillus subtilis (strain 168)
GN=ytfP PE=4 SV=2
Length = 420
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 215/436 (49%), Gaps = 40/436 (9%)
Query: 53 LVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLS-KVKISGGGRCNVTNGHCADKMIL 111
++V+GGG +G+ AI A V++I+KG L K+ ISGGGRCNVTN +++I
Sbjct: 6 VIVIGGGPSGLMAAIAAGEQGA--GVLLIDKGNKLGRKLAISGGGRCNVTNRLPVEEII- 62
Query: 112 AGHYPRGHKEFRGSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTE 171
H P G+ F S FS D + +F + G++LK ED GR+FPV+D + SV+D LL
Sbjct: 63 -KHIP-GNGRFLYSAFSEFNNEDIIKFFENLGIQLKEEDHGRMFPVTDKAQSVVDALLNR 120
Query: 172 AKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIA--------SGS 223
K V ++T + + + ++ ++ N E I + ++IA +GS
Sbjct: 121 LKQLRVTIRTNEKIKSVLYEDGQAAGIV------TNNGEMIHSQAVIIAVGGKSVPHTGS 174
Query: 224 SQQGHRLAAQLGHSIVDPVPSLFTFKIADSQLTELSGVSF--PKVVAKLKLENV------ 275
+ G+ A GH+I + P+ ++ SG F K + L L +V
Sbjct: 175 TGDGYEWAEAAGHTITELFPT---------EVPVTSGEPFIKQKTLQGLSLRDVAVSVLN 225
Query: 276 QRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLFSSCYKGMLTVDFVPDLHIEDMQS 335
++ P +T ML TH+GLSGP ILR S + + L + + +D PD++ E +
Sbjct: 226 KKGKPIITHKMDMLFTHFGLSGPAILRCSQFVVKEL-KKQPQVPIRIDLYPDINEETLFQ 284
Query: 336 ILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLK 395
+ + K+ + N P + +R+ ++L + G+S + ++ + + R K
Sbjct: 285 KMYKELKEAPKKTIKNVLKP--WMQERYLLFLLEKNGISPNVSFSELPKDPFRQFVRDCK 342
Query: 396 HCTLEVAGKGQFKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQN 455
T+ G FVT GGV + EI M SK L+F GE+L++ G TGG+N +
Sbjct: 343 QFTVLANGTLSLDKAFVTGGGVSVKEIDPKKMASKKMEGLYFCGEILDIHGYTGGYNITS 402
Query: 456 AWSGGYIAGTSIGKLS 471
A G +AG + G+ +
Sbjct: 403 ALVTGRLAGLNAGQYA 418
>sp|P44941|Y933_HAEIN Uncharacterized protein HI_0933 OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0933 PE=1 SV=1
Length = 401
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 199/429 (46%), Gaps = 49/429 (11%)
Query: 54 VVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLS-KVKISGGGRCNVTNGHCADKMILA 112
+++G GAAG++ A + + +V + + GK + K+ +SGGG CN TN +
Sbjct: 8 IIIGAGAAGLFCAAQLAKLGK--SVTVFDNGKKIGRKILMSGGGFCNFTNLE-----VTP 60
Query: 113 GHYPRGHKEFRGSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEA 172
HY + F S + + D +S ++ G+ ++ G++F + + +++ L +E
Sbjct: 61 AHYLSQNPHFVKSALARYTNWDFISLVAEQGITYHEKELGQLF-CDEGAEQIVEMLKSEC 119
Query: 173 KHRG--VVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEAD--YLLIASGSSQQGH 228
G ++L++ ++ +F+L+V I A + G++ G+
Sbjct: 120 DKYGAKILLRSEVSQVERIQNDEKVRFVLQVNSTQWQCKNLIVATGGLSMPGLGATPFGY 179
Query: 229 RLAAQLGHSIVDPVPSL--FTFKIADSQLTELSGVSFPKVVAKLKLENVQRSSPYLTQVG 286
++A Q G ++ P SL FT++ D LT LSG+S P + L + Q
Sbjct: 180 QIAEQFGIPVIPPRASLVPFTYRETDKFLTALSGISLPVTITALC------GKSFYNQ-- 231
Query: 287 PMLVTHWGLSGPVILRLSAWGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAK 346
+L TH G+SGP +L++S + + +D +P+ ++E+ +I AK
Sbjct: 232 -LLFTHRGISGPAVLQISNYWQP-------TESVEIDLLPNHNVEE--------EINQAK 275
Query: 347 QKVLNSCPPEF---CLVKRFWKYILG---REGLSGDTLWASVSNNSLISIARLLKHCTLE 400
Q S P + LV+ K ++ +G+ D + A++S + ++ + H
Sbjct: 276 Q----SSPKQMLKTILVRLLPKKLVELWIEQGIVQDEVIANISKVRVKNLVDFIHHWEFT 331
Query: 401 VAGKGQFKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGG 460
G ++ VT GGV IS TMES L+F GEVL+V G GG+NFQ AWS
Sbjct: 332 PNGTEGYRTAEVTMGGVDTKVISSKTMESNQVSGLYFIGEVLDVTGWLGGYNFQWAWSSA 391
Query: 461 YIAGTSIGK 469
Y SI +
Sbjct: 392 YACALSISR 400
>sp|P37631|YHIN_ECOLI Uncharacterized protein YhiN OS=Escherichia coli (strain K12)
GN=yhiN PE=4 SV=3
Length = 400
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 188/400 (47%), Gaps = 56/400 (14%)
Query: 78 VVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHGPMDTM 136
V++I+ GK P K+ +SGGGRCN TN + + G Y + F S + D +
Sbjct: 29 VLLIDNGKKPGRKILMSGGGRCNFTNLY-----VEPGAYLSQNPHFCKSALARFTQWDFI 83
Query: 137 SWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRK 196
+ HG+ + G++F DS+ ++D L+ E + V + V + + D G
Sbjct: 84 DLVNKHGIAWHEKTLGQLF-CDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETG-- 140
Query: 197 FLLKVEKRTMNLVECIEADYLLIASG--------SSQQGHRLAAQLGHSIVDPVPSLFTF 248
F L + T V C + L+IA+G +S G+++A Q G +++ L F
Sbjct: 141 FTLDLNGMT---VGC---EKLVIATGGLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPF 194
Query: 249 KIADSQLTEL---SGVSFPKVVAKLKLEN--VQRSSPYLTQVGPMLVTHWGLSGPVILRL 303
+ L EL +GV+ P V+ EN V R + +L TH GLSGP +L++
Sbjct: 195 TLHKPLLEELQVLAGVAVPSVITA---ENGTVFREN--------LLFTHRGLSGPAVLQI 243
Query: 304 SAWGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFC--LVK 361
S++ F S ++ +PD+ D+++ L++ + Q + N+ LV+
Sbjct: 244 SSYWQPGEFVS-------INLLPDV---DLETFLNEQRNAHPNQSLKNTLAVHLPKRLVE 293
Query: 362 RFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSE 421
R L + G D ++ ++ L ++ G ++ VT GGV +E
Sbjct: 294 R-----LQQLGQIPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGYRTAEVTLGGVDTNE 348
Query: 422 ISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGY 461
+S TME++ P L+F GEV++V G GG+NFQ AWS +
Sbjct: 349 LSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAW 388
>sp|Q1LTU7|MNMG_BAUCH tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Baumannia cicadellinicola subsp. Homalodisca
coagulata GN=mnmG PE=3 SV=1
Length = 631
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Query: 425 NTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGK--LSNDATLKNR 479
NT+ESKI LFFAG+ ++G TG ++ A + G IAG + K L D+ NR
Sbjct: 355 NTLESKIINGLFFAGQ---INGTTG---YEEAAAQGLIAGINAAKKVLEQDSWYPNR 405
>sp|A4J5Z8|TRMFO_DESRM Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO
OS=Desulfotomaculum reducens (strain MI-1) GN=trmFO PE=3
SV=1
Length = 441
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 426 TMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSNDATL 476
T++ K HPR+FFAG++ V+G + + + G IAG + L+ L
Sbjct: 326 TLQMKEHPRIFFAGQITGVEG------YVESAAAGLIAGINAAALAKQKDL 370
>sp|A1JTD9|MNMG_YERE8 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Yersinia enterocolitica serotype O:8 / biotype 1B
(strain 8081) GN=mnmG PE=3 SV=1
Length = 629
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 426 TMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSND 473
T+ESK LFFAG++ +G TG ++ A + G +AG + G+ +ND
Sbjct: 356 TLESKYIQGLFFAGQI---NGTTG---YEEAAAQGLLAGLNAGRFAND 397
>sp|Q8TEK3|DOT1L_HUMAN Histone-lysine N-methyltransferase, H3 lysine-79 specific OS=Homo
sapiens GN=DOT1L PE=1 SV=2
Length = 1739
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 432 HPRLFFAGEVLNVDGVTGGFNFQNA--WSGGYIAGTSIGKLSNDATLKNRG 480
HPR F G + DG++ G N N + GG A S+ S+ A+L ++G
Sbjct: 1291 HPRKGFPGSLSGADGLSPGTNPANGCTFGGGLAADLSLHSFSDGASLPHKG 1341
>sp|Q5URB2|YR188_MIMIV Uncharacterized protein R188 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R188 PE=1 SV=1
Length = 509
Score = 33.5 bits (75), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 53 LVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83
+++VGGGA+G+Y A R P V++IE+
Sbjct: 23 ILIVGGGASGIYSAWRLSQTYPNKKVLVIEE 53
>sp|B5YXE5|MNMG_ECO5E tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Escherichia coli O157:H7 (strain EC4115 / EHEC)
GN=mnmG PE=3 SV=1
Length = 629
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 426 TMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSND 473
T+ESK LFFAG+ ++G TG ++ A + G +AG + +LS+D
Sbjct: 356 TLESKFIQGLFFAGQ---INGTTG---YEEAAAQGLLAGLNAARLSDD 397
>sp|Q8XAY0|MNMG_ECO57 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Escherichia coli O157:H7 GN=mnmG PE=1 SV=1
Length = 629
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 426 TMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSND 473
T+ESK LFFAG+ ++G TG ++ A + G +AG + +LS+D
Sbjct: 356 TLESKFIQGLFFAGQ---INGTTG---YEEAAAQGLLAGLNAARLSDD 397
>sp|B1JR32|MNMG_YERPY tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Yersinia pseudotuberculosis serotype O:3 (strain
YPIII) GN=mnmG PE=3 SV=1
Length = 629
Score = 32.3 bits (72), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 426 TMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSND 473
T+ESK LFFAG++ +G TG ++ A + G +AG + G+ +N+
Sbjct: 356 TLESKYIQGLFFAGQI---NGTTG---YEEAAAQGLLAGLNAGRFANE 397
>sp|Q663P9|MNMG_YERPS tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Yersinia pseudotuberculosis serotype I (strain
IP32953) GN=mnmG PE=3 SV=1
Length = 629
Score = 32.3 bits (72), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 426 TMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSND 473
T+ESK LFFAG++ +G TG ++ A + G +AG + G+ +N+
Sbjct: 356 TLESKYIQGLFFAGQI---NGTTG---YEEAAAQGLLAGLNAGRFANE 397
>sp|A4TSI4|MNMG_YERPP tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Yersinia pestis (strain Pestoides F) GN=mnmG PE=3
SV=1
Length = 629
Score = 32.3 bits (72), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 426 TMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSND 473
T+ESK LFFAG++ +G TG ++ A + G +AG + G+ +N+
Sbjct: 356 TLESKYIQGLFFAGQI---NGTTG---YEEAAAQGLLAGLNAGRFANE 397
>sp|Q1CCG6|MNMG_YERPN tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=mnmG
PE=3 SV=1
Length = 629
Score = 32.3 bits (72), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 426 TMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSND 473
T+ESK LFFAG++ +G TG ++ A + G +AG + G+ +N+
Sbjct: 356 TLESKYIQGLFFAGQI---NGTTG---YEEAAAQGLLAGLNAGRFANE 397
>sp|A9R5U9|MNMG_YERPG tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Yersinia pestis bv. Antiqua (strain Angola) GN=mnmG
PE=3 SV=1
Length = 629
Score = 32.3 bits (72), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 426 TMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSND 473
T+ESK LFFAG++ +G TG ++ A + G +AG + G+ +N+
Sbjct: 356 TLESKYIQGLFFAGQI---NGTTG---YEEAAAQGLLAGLNAGRFANE 397
>sp|Q8Z9R8|MNMG_YERPE tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Yersinia pestis GN=mnmG PE=3 SV=1
Length = 629
Score = 32.3 bits (72), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 426 TMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSND 473
T+ESK LFFAG++ +G TG ++ A + G +AG + G+ +N+
Sbjct: 356 TLESKYIQGLFFAGQI---NGTTG---YEEAAAQGLLAGLNAGRFANE 397
>sp|B2K7J2|MNMG_YERPB tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Yersinia pseudotuberculosis serotype IB (strain
PB1/+) GN=mnmG PE=3 SV=1
Length = 629
Score = 32.3 bits (72), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 426 TMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSND 473
T+ESK LFFAG++ +G TG ++ A + G +AG + G+ +N+
Sbjct: 356 TLESKYIQGLFFAGQI---NGTTG---YEEAAAQGLLAGLNAGRFANE 397
>sp|Q1C086|MNMG_YERPA tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=mnmG
PE=3 SV=1
Length = 629
Score = 32.3 bits (72), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 426 TMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSND 473
T+ESK LFFAG++ +G TG ++ A + G +AG + G+ +N+
Sbjct: 356 TLESKYIQGLFFAGQI---NGTTG---YEEAAAQGLLAGLNAGRFANE 397
>sp|A7FPF0|MNMG_YERP3 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Yersinia pseudotuberculosis serotype O:1b (strain IP
31758) GN=mnmG PE=3 SV=1
Length = 629
Score = 32.3 bits (72), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 426 TMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSND 473
T+ESK LFFAG++ +G TG ++ A + G +AG + G+ +N+
Sbjct: 356 TLESKYIQGLFFAGQI---NGTTG---YEEAAAQGLLAGLNAGRFANE 397
>sp|A8GLL0|MNMG_SERP5 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Serratia proteamaculans (strain 568) GN=mnmG PE=3
SV=1
Length = 629
Score = 32.3 bits (72), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 426 TMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSND 473
T+ESK LFFAG+ ++G TG ++ A + G +AG + G+ +N+
Sbjct: 356 TLESKFIQGLFFAGQ---INGTTG---YEEAAAQGLLAGLNAGRYANE 397
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 173,189,262
Number of Sequences: 539616
Number of extensions: 7113007
Number of successful extensions: 17791
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 17761
Number of HSP's gapped (non-prelim): 36
length of query: 481
length of database: 191,569,459
effective HSP length: 121
effective length of query: 360
effective length of database: 126,275,923
effective search space: 45459332280
effective search space used: 45459332280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)