Query 011610
Match_columns 481
No_of_seqs 330 out of 2974
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 11:42:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011610.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011610hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v76_A Flavoprotein; structura 100.0 5.8E-74 2E-78 592.0 27.4 380 49-467 26-417 (417)
2 2gqf_A Hypothetical protein HI 100.0 4.8E-70 1.6E-74 560.7 27.8 382 50-469 4-400 (401)
3 2i0z_A NAD(FAD)-utilizing dehy 100.0 4.8E-65 1.7E-69 531.4 30.4 408 48-472 24-444 (447)
4 1y0p_A Fumarate reductase flav 99.9 2.7E-25 9.4E-30 238.2 22.0 376 50-473 126-570 (571)
5 1qo8_A Flavocytochrome C3 fuma 99.9 2.2E-25 7.4E-30 238.7 20.6 377 49-472 120-564 (566)
6 4at0_A 3-ketosteroid-delta4-5a 99.9 3.2E-24 1.1E-28 226.9 23.0 375 47-471 38-510 (510)
7 2wdq_A Succinate dehydrogenase 99.9 1.1E-23 3.7E-28 226.0 27.4 352 49-472 6-424 (588)
8 2h88_A Succinate dehydrogenase 99.9 1.7E-23 5.7E-28 225.1 27.2 353 48-472 16-433 (621)
9 2bs2_A Quinol-fumarate reducta 99.9 9.5E-24 3.2E-28 228.5 24.7 348 49-472 4-429 (660)
10 1d4d_A Flavocytochrome C fumar 99.9 3.4E-24 1.2E-28 229.5 19.1 376 49-473 125-571 (572)
11 1chu_A Protein (L-aspartate ox 99.9 2.7E-23 9.1E-28 220.9 23.8 351 48-472 6-411 (540)
12 1kf6_A Fumarate reductase flav 99.9 1.3E-21 4.4E-26 210.3 28.1 352 49-471 4-415 (602)
13 3cp8_A TRNA uridine 5-carboxym 99.9 1.7E-22 5.9E-27 215.4 9.4 81 380-476 330-416 (641)
14 3gyx_A Adenylylsulfate reducta 99.9 3.9E-21 1.3E-25 208.0 20.1 190 49-242 21-273 (662)
15 3ces_A MNMG, tRNA uridine 5-ca 99.9 2.7E-21 9.3E-26 206.2 18.3 80 380-476 336-422 (651)
16 1jnr_A Adenylylsulfate reducta 99.9 7E-21 2.4E-25 206.3 21.7 200 48-251 20-267 (643)
17 2zxi_A TRNA uridine 5-carboxym 99.8 9.3E-20 3.2E-24 193.7 16.3 146 49-224 26-179 (637)
18 3nlc_A Uncharacterized protein 99.8 4.7E-19 1.6E-23 187.4 16.2 193 47-251 104-303 (549)
19 2e5v_A L-aspartate oxidase; ar 99.8 8.3E-18 2.8E-22 175.8 25.0 177 52-241 1-206 (472)
20 4gcm_A TRXR, thioredoxin reduc 99.5 4.4E-14 1.5E-18 139.0 8.6 112 49-225 5-116 (312)
21 3dme_A Conserved exported prot 99.5 2.7E-13 9.2E-18 135.9 13.9 180 49-237 3-220 (369)
22 3oz2_A Digeranylgeranylglycero 99.5 2.2E-13 7.5E-18 137.7 13.0 164 50-238 4-172 (397)
23 3nyc_A D-arginine dehydrogenas 99.4 4.9E-13 1.7E-17 134.8 11.7 181 49-244 8-226 (381)
24 2oln_A NIKD protein; flavoprot 99.4 9.7E-13 3.3E-17 133.9 13.9 177 49-237 3-218 (397)
25 3dje_A Fructosyl amine: oxygen 99.4 8.9E-13 3E-17 136.0 13.2 84 160-253 159-246 (438)
26 4a9w_A Monooxygenase; baeyer-v 99.4 2.5E-12 8.7E-17 128.0 15.7 128 50-225 3-132 (357)
27 2gf3_A MSOX, monomeric sarcosi 99.4 1.3E-12 4.6E-17 132.2 13.9 173 49-235 2-213 (389)
28 1ryi_A Glycine oxidase; flavop 99.4 1.4E-12 4.7E-17 131.8 13.9 68 160-237 162-229 (382)
29 1y56_B Sarcosine oxidase; dehy 99.4 2.6E-12 8.9E-17 129.9 15.9 179 49-244 4-223 (382)
30 3g5s_A Methylenetetrahydrofola 99.4 9.2E-14 3.1E-18 138.5 4.9 67 404-476 293-366 (443)
31 3nrn_A Uncharacterized protein 99.4 5E-11 1.7E-15 122.3 24.2 63 152-224 180-242 (421)
32 3ps9_A TRNA 5-methylaminomethy 99.4 4.9E-12 1.7E-16 137.9 16.2 80 160-248 415-494 (676)
33 3pvc_A TRNA 5-methylaminomethy 99.4 1.4E-12 4.8E-17 142.5 11.1 73 160-241 410-483 (689)
34 2gag_B Heterotetrameric sarcos 99.3 1.5E-11 5.2E-16 125.0 17.2 184 48-244 19-246 (405)
35 2uzz_A N-methyl-L-tryptophan o 99.3 8.6E-12 2.9E-16 125.5 12.7 57 161-225 148-204 (372)
36 3r9u_A Thioredoxin reductase; 99.3 3E-12 1E-16 125.4 9.1 114 49-224 3-117 (315)
37 3da1_A Glycerol-3-phosphate de 99.3 5.2E-11 1.8E-15 126.9 15.5 76 159-237 167-242 (561)
38 3fmw_A Oxygenase; mithramycin, 99.3 3.9E-11 1.3E-15 128.0 14.4 168 48-239 47-218 (570)
39 2qa1_A PGAE, polyketide oxygen 99.2 1.1E-10 3.7E-15 122.7 17.2 167 45-238 6-175 (500)
40 3nix_A Flavoprotein/dehydrogen 99.2 8.9E-11 3E-15 120.1 15.6 155 49-238 4-176 (421)
41 2qa2_A CABE, polyketide oxygen 99.2 1.4E-10 4.8E-15 121.8 17.4 166 46-238 8-176 (499)
42 2bry_A NEDD9 interacting prote 99.2 3.6E-12 1.2E-16 133.9 5.1 177 48-262 90-270 (497)
43 3cgv_A Geranylgeranyl reductas 99.2 8.8E-11 3E-15 118.9 14.6 163 50-238 4-172 (397)
44 3ihg_A RDME; flavoenzyme, anth 99.2 1.8E-10 6.3E-15 122.0 17.3 72 160-238 118-193 (535)
45 1rp0_A ARA6, thiazole biosynth 99.2 8.1E-11 2.8E-15 114.4 13.4 142 49-225 38-191 (284)
46 3i3l_A Alkylhalidase CMLS; fla 99.2 7.4E-11 2.5E-15 126.2 14.2 153 50-237 23-197 (591)
47 1pj5_A N,N-dimethylglycine oxi 99.2 1.6E-10 5.3E-15 128.9 16.9 78 160-247 149-226 (830)
48 3axb_A Putative oxidoreductase 99.2 2.4E-11 8.1E-16 125.8 8.1 69 160-237 179-264 (448)
49 3jsk_A Cypbp37 protein; octame 99.2 1.4E-10 4.7E-15 115.0 13.2 145 49-226 78-252 (344)
50 3e1t_A Halogenase; flavoprotei 99.2 1.6E-10 5.5E-15 121.8 14.5 147 49-225 6-172 (512)
51 3rp8_A Flavoprotein monooxygen 99.2 1.2E-11 4.3E-16 126.2 5.5 146 44-226 17-182 (407)
52 4fk1_A Putative thioredoxin re 99.2 1E-10 3.4E-15 114.6 11.2 113 49-225 5-117 (304)
53 3qj4_A Renalase; FAD/NAD(P)-bi 99.2 3E-10 1E-14 113.1 14.8 148 51-223 2-163 (342)
54 3f8d_A Thioredoxin reductase ( 99.1 2.3E-10 8E-15 112.1 12.9 112 49-225 14-125 (323)
55 3klj_A NAD(FAD)-dependent dehy 99.1 5.5E-11 1.9E-15 120.8 8.4 111 46-225 5-116 (385)
56 2x3n_A Probable FAD-dependent 99.1 4.8E-10 1.6E-14 114.0 15.4 152 49-238 5-176 (399)
57 2qcu_A Aerobic glycerol-3-phos 99.1 3E-10 1E-14 119.4 14.1 73 160-236 147-220 (501)
58 1yvv_A Amine oxidase, flavin-c 99.1 3.8E-10 1.3E-14 111.7 13.4 36 50-87 2-38 (336)
59 2q0l_A TRXR, thioredoxin reduc 99.1 2.3E-10 7.9E-15 112.0 11.6 113 50-225 1-114 (311)
60 2rgh_A Alpha-glycerophosphate 99.1 8.9E-10 3E-14 117.6 17.0 75 160-237 186-260 (571)
61 3c4n_A Uncharacterized protein 99.1 9.5E-11 3.2E-15 119.8 8.7 69 160-238 170-248 (405)
62 4a5l_A Thioredoxin reductase; 99.1 1.5E-10 5E-15 113.5 9.7 119 49-225 3-121 (314)
63 1k0i_A P-hydroxybenzoate hydro 99.1 2.3E-10 8E-15 116.1 10.6 60 160-225 101-163 (394)
64 3ka7_A Oxidoreductase; structu 99.1 1.7E-09 5.7E-14 110.7 16.9 64 153-225 188-252 (425)
65 3cty_A Thioredoxin reductase; 99.1 3.9E-10 1.3E-14 110.9 11.5 113 48-225 14-126 (319)
66 2gjc_A Thiazole biosynthetic e 99.1 6E-10 2E-14 109.8 12.6 145 49-225 64-239 (326)
67 2q7v_A Thioredoxin reductase; 99.1 4.3E-10 1.5E-14 111.0 11.7 115 49-225 7-123 (325)
68 2ywl_A Thioredoxin reductase r 99.1 1E-09 3.4E-14 98.8 12.6 119 50-238 1-120 (180)
69 3itj_A Thioredoxin reductase 1 99.1 4.6E-10 1.6E-14 110.9 10.8 126 45-225 17-142 (338)
70 4dgk_A Phytoene dehydrogenase; 99.1 1.4E-09 4.6E-14 114.0 15.0 58 161-224 220-277 (501)
71 3ab1_A Ferredoxin--NADP reduct 99.1 6.5E-10 2.2E-14 111.3 12.0 117 49-224 13-130 (360)
72 2vou_A 2,6-dihydroxypyridine h 99.0 2.6E-09 9E-14 108.6 16.0 145 49-226 4-154 (397)
73 3o0h_A Glutathione reductase; 99.0 2.1E-09 7E-14 112.5 15.4 96 134-238 205-302 (484)
74 3alj_A 2-methyl-3-hydroxypyrid 99.0 2.1E-10 7.2E-15 116.0 7.1 143 50-236 11-168 (379)
75 2a87_A TRXR, TR, thioredoxin r 99.0 8.7E-10 3E-14 109.3 11.4 114 48-225 12-126 (335)
76 3lzw_A Ferredoxin--NADP reduct 99.0 9.3E-10 3.2E-14 108.3 11.4 114 50-223 7-121 (332)
77 2gmh_A Electron transfer flavo 99.0 3.6E-10 1.2E-14 121.0 9.0 78 160-238 142-231 (584)
78 2xdo_A TETX2 protein; tetracyc 99.0 1.6E-09 5.6E-14 110.2 13.5 143 48-225 24-182 (398)
79 2r0c_A REBC; flavin adenine di 99.0 3.1E-09 1.1E-13 112.9 16.1 70 161-238 137-206 (549)
80 3nks_A Protoporphyrinogen oxid 99.0 1.8E-09 6E-14 112.4 13.8 58 159-223 231-288 (477)
81 2cul_A Glucose-inhibited divis 99.0 1.7E-09 5.7E-14 101.9 12.3 120 50-224 3-124 (232)
82 3s5w_A L-ornithine 5-monooxyge 99.0 5.5E-10 1.9E-14 116.0 9.8 153 49-225 29-192 (463)
83 3k7m_X 6-hydroxy-L-nicotine ox 99.0 1.2E-09 4E-14 112.2 11.7 37 50-88 1-38 (431)
84 2gv8_A Monooxygenase; FMO, FAD 99.0 1.6E-09 5.4E-14 112.1 12.7 155 49-224 5-176 (447)
85 2xve_A Flavin-containing monoo 99.0 1.8E-09 6E-14 112.4 12.6 151 50-223 2-164 (464)
86 3fbs_A Oxidoreductase; structu 99.0 1.9E-09 6.4E-14 104.4 11.5 110 50-225 2-112 (297)
87 4dna_A Probable glutathione re 99.0 2.5E-09 8.5E-14 111.2 12.4 71 161-238 210-282 (463)
88 3gwf_A Cyclohexanone monooxyge 99.0 2.1E-09 7.3E-14 113.8 11.9 135 49-223 7-145 (540)
89 1vdc_A NTR, NADPH dependent th 99.0 1E-09 3.4E-14 108.5 8.7 112 50-225 8-124 (333)
90 3d1c_A Flavin-containing putat 99.0 1.5E-09 5.2E-14 108.7 10.0 134 50-225 4-143 (369)
91 3atr_A Conserved archaeal prot 99.0 4.9E-10 1.7E-14 116.1 6.4 160 49-236 5-170 (453)
92 1w4x_A Phenylacetone monooxyge 99.0 3.4E-09 1.1E-13 112.5 12.9 137 48-224 14-153 (542)
93 4b63_A L-ornithine N5 monooxyg 99.0 5.6E-10 1.9E-14 117.3 6.8 162 44-225 33-214 (501)
94 4ap3_A Steroid monooxygenase; 99.0 2.8E-09 9.5E-14 113.1 12.2 136 48-223 19-157 (549)
95 1trb_A Thioredoxin reductase; 98.9 2.8E-09 9.6E-14 104.6 11.2 113 49-225 4-116 (320)
96 4b1b_A TRXR, thioredoxin reduc 98.9 4.2E-09 1.4E-13 111.4 13.2 58 161-225 262-319 (542)
97 4gde_A UDP-galactopyranose mut 98.9 9.1E-10 3.1E-14 115.5 8.0 59 155-222 215-273 (513)
98 2zbw_A Thioredoxin reductase; 98.9 2.8E-09 9.6E-14 105.4 10.8 116 49-224 4-120 (335)
99 4gut_A Lysine-specific histone 98.9 1.6E-08 5.6E-13 111.1 16.9 39 48-88 334-373 (776)
100 1mo9_A ORF3; nucleotide bindin 98.9 1.2E-08 4E-13 107.8 15.2 72 161-238 254-329 (523)
101 3urh_A Dihydrolipoyl dehydroge 98.9 1.4E-08 4.6E-13 106.4 15.5 101 134-238 212-314 (491)
102 2dkh_A 3-hydroxybenzoate hydro 98.9 1.2E-08 4.2E-13 110.3 15.5 76 160-238 139-221 (639)
103 2weu_A Tryptophan 5-halogenase 98.9 7.3E-09 2.5E-13 108.9 13.3 60 160-225 171-230 (511)
104 2ivd_A PPO, PPOX, protoporphyr 98.9 1E-08 3.5E-13 106.6 14.3 61 153-224 230-293 (478)
105 1fl2_A Alkyl hydroperoxide red 98.9 5.4E-09 1.8E-13 102.1 11.4 114 50-225 1-115 (310)
106 3i6d_A Protoporphyrinogen oxid 98.9 3.9E-09 1.3E-13 109.2 10.9 54 161-223 234-287 (470)
107 3c96_A Flavin-containing monoo 98.9 9.4E-09 3.2E-13 104.9 13.5 63 161-226 106-170 (410)
108 1ojt_A Surface protein; redox- 98.9 1.1E-09 3.9E-14 114.4 6.6 145 49-225 5-160 (482)
109 2vvm_A Monoamine oxidase N; FA 98.9 9.5E-09 3.2E-13 107.5 13.4 60 157-223 250-310 (495)
110 2e4g_A Tryptophan halogenase; 98.9 1.7E-08 5.7E-13 107.3 14.4 60 160-225 192-252 (550)
111 3vrd_B FCCB subunit, flavocyto 98.9 3.3E-09 1.1E-13 107.9 8.6 54 422-477 276-329 (401)
112 3dk9_A Grase, GR, glutathione 98.9 4E-09 1.4E-13 110.0 9.4 38 48-87 18-55 (478)
113 3uox_A Otemo; baeyer-villiger 98.9 9.3E-09 3.2E-13 109.0 12.3 135 49-223 8-145 (545)
114 1ebd_A E3BD, dihydrolipoamide 98.9 1.1E-09 3.8E-14 113.6 5.0 140 49-225 2-145 (455)
115 1ges_A Glutathione reductase; 98.8 6.9E-09 2.4E-13 107.4 10.5 71 162-238 208-279 (450)
116 2aqj_A Tryptophan halogenase, 98.8 2.7E-09 9.4E-14 113.0 7.5 59 160-225 163-222 (538)
117 2pyx_A Tryptophan halogenase; 98.8 2.1E-08 7.2E-13 105.9 14.0 59 160-225 173-233 (526)
118 1dxl_A Dihydrolipoamide dehydr 98.8 8E-09 2.7E-13 107.5 10.5 142 49-225 5-151 (470)
119 3lxd_A FAD-dependent pyridine 98.8 3.4E-08 1.2E-12 101.0 14.7 71 161-238 193-263 (415)
120 3dgh_A TRXR-1, thioredoxin red 98.8 4.2E-08 1.4E-12 102.4 15.5 63 162-225 227-289 (483)
121 1s3e_A Amine oxidase [flavin-c 98.8 4.2E-08 1.4E-12 103.3 14.7 56 159-224 212-267 (520)
122 2a8x_A Dihydrolipoyl dehydroge 98.8 1.2E-08 4.1E-13 106.0 10.2 138 50-225 3-146 (464)
123 2v3a_A Rubredoxin reductase; a 98.8 4.7E-08 1.6E-12 98.9 14.1 70 161-238 186-255 (384)
124 2qae_A Lipoamide, dihydrolipoy 98.8 1.3E-08 4.3E-13 106.0 10.0 141 50-225 2-148 (468)
125 1hyu_A AHPF, alkyl hydroperoxi 98.8 3.5E-08 1.2E-12 104.0 13.6 115 49-225 211-326 (521)
126 2hqm_A GR, grase, glutathione 98.8 1.2E-08 4.1E-13 106.5 9.7 37 49-87 10-46 (479)
127 2r9z_A Glutathione amide reduc 98.8 2.2E-08 7.5E-13 104.0 11.7 70 162-238 207-278 (463)
128 3qvp_A Glucose oxidase; oxidor 98.8 5E-08 1.7E-12 103.8 14.6 75 167-243 232-321 (583)
129 1c0p_A D-amino acid oxidase; a 98.8 1.7E-09 5.7E-14 108.6 3.0 37 49-87 5-41 (363)
130 4hb9_A Similarities with proba 98.8 7.5E-09 2.6E-13 104.9 7.9 54 175-237 122-175 (412)
131 3l8k_A Dihydrolipoyl dehydroge 98.8 8.2E-09 2.8E-13 107.4 8.4 37 49-87 3-40 (466)
132 3fg2_P Putative rubredoxin red 98.8 4.1E-08 1.4E-12 100.1 13.2 71 161-238 183-253 (404)
133 3oc4_A Oxidoreductase, pyridin 98.8 7E-08 2.4E-12 99.9 14.9 82 135-225 162-244 (452)
134 3lad_A Dihydrolipoamide dehydr 98.8 1.2E-08 4E-13 106.4 9.0 35 49-85 2-36 (476)
135 3qfa_A Thioredoxin reductase 1 98.8 7.9E-09 2.7E-13 109.0 7.7 150 48-225 30-185 (519)
136 1onf_A GR, grase, glutathione 98.8 3E-08 1E-12 104.1 12.0 72 161-238 216-289 (500)
137 1v59_A Dihydrolipoamide dehydr 98.8 1E-08 3.5E-13 106.9 8.3 140 49-225 4-157 (478)
138 3dgz_A Thioredoxin reductase 2 98.7 2.8E-08 9.7E-13 103.9 11.0 34 48-83 4-37 (488)
139 1xdi_A RV3303C-LPDA; reductase 98.7 2E-08 7E-13 105.3 9.7 38 50-87 2-40 (499)
140 3ic9_A Dihydrolipoamide dehydr 98.7 3E-08 1E-12 103.8 10.9 74 161-238 214-288 (492)
141 3p1w_A Rabgdi protein; GDI RAB 98.7 7.8E-08 2.7E-12 99.6 13.6 66 152-224 247-313 (475)
142 3iwa_A FAD-dependent pyridine 98.7 9.9E-08 3.4E-12 99.3 14.3 71 161-239 201-271 (472)
143 1pn0_A Phenol 2-monooxygenase; 98.7 6E-08 2.1E-12 105.2 12.8 76 160-238 117-240 (665)
144 2bcg_G Secretory pathway GDP d 98.7 1.4E-07 4.8E-12 97.7 15.0 65 153-225 234-300 (453)
145 1zmd_A Dihydrolipoyl dehydroge 98.7 3E-08 1E-12 103.2 10.0 139 48-225 4-152 (474)
146 3ef6_A Toluene 1,2-dioxygenase 98.7 1E-07 3.5E-12 97.3 13.5 69 162-238 185-253 (410)
147 3g3e_A D-amino-acid oxidase; F 98.7 1.8E-09 6.2E-14 107.8 -0.7 47 160-225 140-186 (351)
148 1fec_A Trypanothione reductase 98.7 4.7E-08 1.6E-12 102.3 10.0 33 49-82 2-34 (490)
149 3lov_A Protoporphyrinogen oxid 98.7 8.5E-08 2.9E-12 99.6 11.9 54 160-223 234-287 (475)
150 2yqu_A 2-oxoglutarate dehydrog 98.7 3E-08 1E-12 102.7 8.1 36 50-87 1-37 (455)
151 1lvl_A Dihydrolipoamide dehydr 98.7 5.9E-08 2E-12 100.6 10.4 37 49-87 4-40 (458)
152 1rsg_A FMS1 protein; FAD bindi 98.7 4.4E-08 1.5E-12 103.1 9.4 40 49-90 7-48 (516)
153 3c4a_A Probable tryptophan hyd 98.7 3.8E-09 1.3E-13 106.9 1.0 138 51-225 1-143 (381)
154 1zk7_A HGII, reductase, mercur 98.6 3.7E-08 1.3E-12 102.4 8.4 37 49-87 3-39 (467)
155 2eq6_A Pyruvate dehydrogenase 98.6 1.8E-08 6.3E-13 104.7 5.0 36 50-87 6-41 (464)
156 2b9w_A Putative aminooxidase; 98.6 3E-07 1E-11 93.9 14.0 38 49-88 5-44 (424)
157 2jae_A L-amino acid oxidase; o 98.6 4E-07 1.4E-11 94.9 15.1 58 159-222 236-293 (489)
158 2wpf_A Trypanothione reductase 98.6 7.5E-08 2.6E-12 100.9 9.5 32 49-82 6-38 (495)
159 3q9t_A Choline dehydrogenase a 98.6 6.4E-07 2.2E-11 95.3 16.0 66 173-240 217-295 (577)
160 3ntd_A FAD-dependent pyridine 98.6 6.1E-07 2.1E-11 95.3 15.6 71 161-238 191-279 (565)
161 2bc0_A NADH oxidase; flavoprot 98.6 2.6E-07 8.8E-12 96.6 12.3 114 49-225 34-149 (490)
162 2yg5_A Putrescine oxidase; oxi 98.6 5.1E-07 1.7E-11 93.0 13.8 38 50-89 5-43 (453)
163 3kkj_A Amine oxidase, flavin-c 98.6 4.5E-08 1.5E-12 91.8 5.3 37 49-87 1-38 (336)
164 3kd9_A Coenzyme A disulfide re 98.5 1.3E-07 4.4E-12 97.8 8.9 36 50-85 3-38 (449)
165 3k30_A Histamine dehydrogenase 98.5 3.3E-07 1.1E-11 99.9 12.3 57 164-226 569-625 (690)
166 1q1r_A Putidaredoxin reductase 98.5 2.2E-07 7.4E-12 95.6 9.6 110 49-225 3-114 (431)
167 3ics_A Coenzyme A-disulfide re 98.5 3.2E-07 1.1E-11 98.1 11.3 119 48-225 34-152 (588)
168 1d5t_A Guanine nucleotide diss 98.5 9.2E-07 3.2E-11 90.9 14.1 65 153-225 226-290 (433)
169 3cgb_A Pyridine nucleotide-dis 98.5 4.7E-07 1.6E-11 94.4 11.8 37 50-86 36-72 (480)
170 1kdg_A CDH, cellobiose dehydro 98.5 4.8E-07 1.6E-11 95.9 11.6 36 48-85 5-40 (546)
171 2cdu_A NADPH oxidase; flavoenz 98.5 2.9E-07 1E-11 95.1 9.4 116 51-225 1-117 (452)
172 2iid_A L-amino-acid oxidase; f 98.5 7.2E-07 2.4E-11 93.2 12.3 60 158-223 237-296 (498)
173 3pl8_A Pyranose 2-oxidase; sub 98.5 6.1E-07 2.1E-11 96.5 11.6 60 175-235 273-333 (623)
174 3t37_A Probable dehydrogenase; 98.5 2.4E-06 8.4E-11 89.8 16.0 35 49-84 16-50 (526)
175 1nhp_A NADH peroxidase; oxidor 98.4 2.2E-07 7.6E-12 95.9 7.5 35 51-85 1-35 (447)
176 1b37_A Protein (polyamine oxid 98.4 8.8E-07 3E-11 92.0 11.6 57 160-223 204-268 (472)
177 1xhc_A NADH oxidase /nitrite r 98.4 4.7E-07 1.6E-11 91.0 9.0 34 50-86 8-41 (367)
178 2gqw_A Ferredoxin reductase; f 98.4 3.7E-06 1.3E-10 85.7 15.6 66 161-238 186-251 (408)
179 3fpz_A Thiazole biosynthetic e 98.4 7E-07 2.4E-11 88.1 9.6 39 49-87 64-103 (326)
180 2x8g_A Thioredoxin glutathione 98.4 9.6E-07 3.3E-11 94.6 10.1 35 48-84 105-139 (598)
181 4eqs_A Coenzyme A disulfide re 98.4 7.8E-07 2.7E-11 91.6 8.9 115 52-225 2-116 (437)
182 3h8l_A NADH oxidase; membrane 98.4 3.1E-07 1E-11 93.6 5.8 35 51-85 2-37 (409)
183 1m6i_A Programmed cell death p 98.3 1.5E-06 5.2E-11 90.9 11.0 69 162-238 226-294 (493)
184 3sx6_A Sulfide-quinone reducta 98.3 7.1E-07 2.4E-11 91.8 8.2 53 426-478 291-350 (437)
185 3fim_B ARYL-alcohol oxidase; A 98.3 3E-06 1E-10 89.9 12.3 34 50-84 2-35 (566)
186 1y56_A Hypothetical protein PH 98.3 6.9E-07 2.3E-11 93.5 7.3 111 50-225 108-219 (493)
187 2gag_A Heterotetrameric sarcos 98.3 2.5E-06 8.5E-11 96.3 11.7 36 50-87 128-164 (965)
188 3hyw_A Sulfide-quinone reducta 98.2 6.2E-07 2.1E-11 92.1 5.2 53 425-477 279-338 (430)
189 2jbv_A Choline oxidase; alcoho 98.2 7.8E-06 2.7E-10 86.5 13.4 59 166-224 212-272 (546)
190 1ju2_A HydroxynitrIle lyase; f 98.2 5.1E-07 1.7E-11 95.5 3.9 34 48-84 24-57 (536)
191 3h28_A Sulfide-quinone reducta 98.2 2.9E-07 9.8E-12 94.6 1.9 57 417-477 275-338 (430)
192 1n4w_A CHOD, cholesterol oxida 98.1 1.3E-05 4.4E-10 84.0 12.6 34 49-84 4-37 (504)
193 1coy_A Cholesterol oxidase; ox 98.1 1.8E-05 6E-10 83.0 13.5 36 47-84 8-43 (507)
194 2vdc_G Glutamate synthase [NAD 98.1 1.2E-06 4.1E-11 90.7 4.0 37 49-87 121-158 (456)
195 2eq6_A Pyruvate dehydrogenase 98.1 1.8E-05 6.2E-10 81.9 12.9 114 51-238 170-285 (464)
196 1nhp_A NADH peroxidase; oxidor 98.1 2.1E-05 7.3E-10 80.9 12.4 98 49-225 148-246 (447)
197 1ebd_A E3BD, dihydrolipoamide 98.0 5E-05 1.7E-09 78.3 14.4 100 50-225 170-270 (455)
198 1v59_A Dihydrolipoamide dehydr 98.0 5E-05 1.7E-09 78.8 14.1 104 50-226 183-288 (478)
199 2yqu_A 2-oxoglutarate dehydrog 98.0 3.2E-05 1.1E-09 79.8 12.5 97 51-226 168-265 (455)
200 1fec_A Trypanothione reductase 98.0 1.5E-05 5E-10 83.3 9.7 110 51-238 188-302 (490)
201 1gpe_A Protein (glucose oxidas 98.0 4.9E-05 1.7E-09 81.1 13.6 35 49-84 23-57 (587)
202 4g6h_A Rotenone-insensitive NA 98.0 2.5E-05 8.7E-10 81.7 10.7 71 161-236 271-345 (502)
203 1zmd_A Dihydrolipoyl dehydroge 98.0 5.7E-05 2E-09 78.3 13.3 116 51-238 179-296 (474)
204 1q1r_A Putidaredoxin reductase 98.0 5.2E-05 1.8E-09 77.7 12.8 111 50-238 149-262 (431)
205 2qae_A Lipoamide, dihydrolipoy 97.9 5.1E-05 1.7E-09 78.6 12.3 113 51-238 175-290 (468)
206 3s5w_A L-ornithine 5-monooxyge 97.9 0.00013 4.4E-09 75.2 14.9 147 50-225 227-377 (463)
207 1cjc_A Protein (adrenodoxin re 97.9 4.1E-06 1.4E-10 86.8 2.8 36 49-84 5-40 (460)
208 1lqt_A FPRA; NADP+ derivative, 97.9 2.3E-06 7.8E-11 88.6 0.5 38 50-87 3-46 (456)
209 2hqm_A GR, grase, glutathione 97.9 4.9E-05 1.7E-09 79.0 10.6 109 51-238 186-298 (479)
210 1trb_A Thioredoxin reductase; 97.9 0.0002 6.9E-09 69.5 14.4 102 50-225 145-247 (320)
211 2wpf_A Trypanothione reductase 97.8 5.3E-05 1.8E-09 79.1 10.5 112 51-238 192-306 (495)
212 3cgb_A Pyridine nucleotide-dis 97.8 0.0001 3.5E-09 76.6 12.5 108 50-238 186-294 (480)
213 3hdq_A UDP-galactopyranose mut 97.8 1.3E-05 4.5E-10 81.2 5.5 40 47-88 26-66 (397)
214 2e1m_A L-glutamate oxidase; L- 97.8 1.5E-05 5.2E-10 80.1 5.9 37 49-87 43-81 (376)
215 3ihm_A Styrene monooxygenase A 97.8 1.3E-05 4.5E-10 82.1 4.8 35 49-85 21-55 (430)
216 1v0j_A UDP-galactopyranose mut 97.8 1.5E-05 5.1E-10 80.9 5.1 38 49-88 6-45 (399)
217 1gte_A Dihydropyrimidine dehyd 97.8 1.4E-05 4.6E-10 90.9 4.7 37 49-87 186-224 (1025)
218 1xhc_A NADH oxidase /nitrite r 97.7 0.00013 4.4E-09 73.1 11.1 102 51-238 144-246 (367)
219 3itj_A Thioredoxin reductase 1 97.7 0.00028 9.7E-09 68.8 13.3 97 50-224 173-270 (338)
220 1dxl_A Dihydrolipoamide dehydr 97.7 0.00016 5.4E-09 74.8 11.9 101 51-225 178-279 (470)
221 1zk7_A HGII, reductase, mercur 97.7 0.00023 8E-09 73.5 13.1 95 51-226 177-272 (467)
222 1xdi_A RV3303C-LPDA; reductase 97.7 0.00021 7.2E-09 74.5 12.7 109 51-238 183-293 (499)
223 2a8x_A Dihydrolipoyl dehydroge 97.7 0.00019 6.5E-09 74.1 11.6 112 51-238 172-285 (464)
224 1sez_A Protoporphyrinogen oxid 97.7 3E-05 1E-09 80.8 5.4 39 49-89 12-51 (504)
225 2bc0_A NADH oxidase; flavoprot 97.7 0.00027 9.3E-09 73.5 12.6 97 50-225 194-291 (490)
226 1ojt_A Surface protein; redox- 97.7 8.9E-05 3E-09 77.1 8.9 114 50-238 185-300 (482)
227 3lad_A Dihydrolipoamide dehydr 97.6 0.00034 1.2E-08 72.4 12.9 99 51-225 181-280 (476)
228 1i8t_A UDP-galactopyranose mut 97.6 3.2E-05 1.1E-09 77.6 4.8 37 50-88 1-38 (367)
229 3dgz_A Thioredoxin reductase 2 97.6 0.00067 2.3E-08 70.5 14.9 103 51-226 186-288 (488)
230 3ics_A Coenzyme A-disulfide re 97.6 0.0003 1E-08 74.9 12.3 106 51-238 188-294 (588)
231 1lvl_A Dihydrolipoamide dehydr 97.6 0.00021 7.1E-09 73.8 9.9 96 51-225 172-268 (458)
232 2cdu_A NADPH oxidase; flavoenz 97.6 0.00067 2.3E-08 69.7 13.5 97 51-226 150-248 (452)
233 3dk9_A Grase, GR, glutathione 97.6 0.00053 1.8E-08 71.0 12.7 102 51-225 188-293 (478)
234 4dsg_A UDP-galactopyranose mut 97.5 7E-05 2.4E-09 78.0 5.8 41 49-91 8-50 (484)
235 3kd9_A Coenzyme A disulfide re 97.5 0.00053 1.8E-08 70.4 12.2 108 51-239 149-257 (449)
236 2bi7_A UDP-galactopyranose mut 97.5 0.0001 3.5E-09 74.3 5.7 37 50-88 3-40 (384)
237 3cty_A Thioredoxin reductase; 97.4 0.0013 4.5E-08 63.8 13.2 97 51-225 156-252 (319)
238 1fl2_A Alkyl hydroperoxide red 97.4 0.0017 5.7E-08 62.7 13.3 97 51-225 145-242 (310)
239 3ab1_A Ferredoxin--NADP reduct 97.4 0.00076 2.6E-08 66.8 10.7 111 51-237 164-274 (360)
240 2q0l_A TRXR, thioredoxin reduc 97.4 0.002 6.9E-08 62.1 13.4 98 50-225 143-241 (311)
241 2zbw_A Thioredoxin reductase; 97.3 0.0029 1E-07 61.7 14.3 101 50-225 152-252 (335)
242 3qfa_A Thioredoxin reductase 1 97.3 0.0029 9.9E-08 66.3 14.5 102 51-225 211-315 (519)
243 3f8d_A Thioredoxin reductase ( 97.3 0.0031 1.1E-07 60.8 13.8 108 51-238 155-263 (323)
244 1o94_A Tmadh, trimethylamine d 97.2 0.00024 8.4E-09 77.7 5.7 38 48-87 387-425 (729)
245 2z3y_A Lysine-specific histone 97.2 0.00029 1E-08 76.2 6.1 39 48-88 105-144 (662)
246 2q7v_A Thioredoxin reductase; 97.2 0.0043 1.5E-07 60.3 13.9 96 51-225 153-249 (325)
247 3lzw_A Ferredoxin--NADP reduct 97.2 0.0031 1E-07 61.2 12.8 97 50-225 154-250 (332)
248 1vdc_A NTR, NADPH dependent th 97.2 0.0024 8.2E-08 62.2 12.0 99 50-225 159-259 (333)
249 3r9u_A Thioredoxin reductase; 97.1 0.0038 1.3E-07 60.0 12.4 95 51-223 148-242 (315)
250 1ps9_A 2,4-dienoyl-COA reducta 97.1 0.00044 1.5E-08 75.0 6.1 38 48-87 371-409 (671)
251 2xag_A Lysine-specific histone 97.1 0.00043 1.5E-08 76.6 6.1 39 48-88 276-315 (852)
252 4eqs_A Coenzyme A disulfide re 97.1 0.0016 5.5E-08 66.7 9.4 104 51-238 148-252 (437)
253 2a87_A TRXR, TR, thioredoxin r 97.0 0.0038 1.3E-07 61.1 11.4 98 50-225 155-252 (335)
254 3d1c_A Flavin-containing putat 97.0 0.0038 1.3E-07 61.7 11.4 106 51-227 167-274 (369)
255 2x8g_A Thioredoxin glutathione 97.0 0.0087 3E-07 63.7 14.8 32 51-84 287-318 (598)
256 3gwf_A Cyclohexanone monooxyge 96.9 0.0022 7.4E-08 67.6 8.8 34 50-85 178-211 (540)
257 3l8k_A Dihydrolipoyl dehydroge 96.9 0.0027 9.4E-08 65.4 9.2 112 50-238 172-285 (466)
258 1hyu_A AHPF, alkyl hydroperoxi 96.7 0.01 3.4E-07 62.1 12.5 97 51-225 356-453 (521)
259 3uox_A Otemo; baeyer-villiger 96.7 0.0019 6.4E-08 68.2 6.7 34 50-85 185-218 (545)
260 3ayj_A Pro-enzyme of L-phenyla 96.4 0.0012 4.2E-08 71.3 3.2 61 158-222 343-411 (721)
261 2vdc_G Glutamate synthase [NAD 96.4 0.0068 2.3E-07 62.4 8.6 33 50-84 264-297 (456)
262 1cjc_A Protein (adrenodoxin re 96.4 0.026 8.9E-07 58.0 13.0 50 175-225 270-333 (460)
263 3fbs_A Oxidoreductase; structu 96.3 0.0067 2.3E-07 57.7 7.6 86 50-225 141-226 (297)
264 1lqt_A FPRA; NADP+ derivative, 96.2 0.019 6.5E-07 59.0 10.4 59 165-225 249-326 (456)
265 1gte_A Dihydropyrimidine dehyd 96.0 0.042 1.4E-06 62.3 12.7 32 51-84 333-365 (1025)
266 4a5l_A Thioredoxin reductase; 95.9 0.11 3.6E-06 49.8 13.6 32 51-84 153-184 (314)
267 1vg0_A RAB proteins geranylger 95.8 0.0088 3E-07 63.9 5.7 64 152-221 369-433 (650)
268 4ap3_A Steroid monooxygenase; 95.7 0.005 1.7E-07 65.0 3.3 34 50-85 191-224 (549)
269 1o94_A Tmadh, trimethylamine d 95.1 0.053 1.8E-06 59.1 9.3 34 50-85 528-563 (729)
270 2gv8_A Monooxygenase; FMO, FAD 95.1 0.027 9.2E-07 57.5 6.6 33 50-84 212-245 (447)
271 2gag_A Heterotetrameric sarcos 94.9 0.092 3.1E-06 59.1 10.8 94 51-225 285-383 (965)
272 3fwz_A Inner membrane protein 94.8 0.041 1.4E-06 46.5 5.9 36 47-84 4-39 (140)
273 1ps9_A 2,4-dienoyl-COA reducta 94.2 0.26 8.9E-06 53.0 12.0 52 166-225 577-628 (671)
274 4b63_A L-ornithine N5 monooxyg 94.0 0.51 1.8E-05 48.8 13.3 34 51-84 247-280 (501)
275 2g1u_A Hypothetical protein TM 94.0 0.064 2.2E-06 46.0 5.3 34 49-84 18-51 (155)
276 1lss_A TRK system potassium up 93.9 0.061 2.1E-06 44.7 4.9 33 50-84 4-36 (140)
277 4fk1_A Putative thioredoxin re 93.7 0.045 1.5E-06 52.5 4.2 42 429-474 261-302 (304)
278 3llv_A Exopolyphosphatase-rela 93.5 0.08 2.7E-06 44.5 5.0 33 50-84 6-38 (141)
279 3ic5_A Putative saccharopine d 93.2 0.082 2.8E-06 42.5 4.4 33 50-84 5-38 (118)
280 1f0y_A HCDH, L-3-hydroxyacyl-C 92.1 0.15 5.1E-06 49.0 5.4 33 50-84 15-47 (302)
281 1w4x_A Phenylacetone monooxyge 92.1 0.73 2.5E-05 48.1 11.0 33 50-84 186-218 (542)
282 4gcm_A TRXR, thioredoxin reduc 92.0 0.13 4.5E-06 49.2 4.8 32 51-84 146-177 (312)
283 3ado_A Lambda-crystallin; L-gu 91.8 0.14 4.8E-06 49.8 4.7 34 49-84 5-38 (319)
284 3i83_A 2-dehydropantoate 2-red 91.8 0.15 5.2E-06 49.5 4.9 34 50-85 2-35 (320)
285 2hmt_A YUAA protein; RCK, KTN, 91.5 0.17 5.8E-06 42.1 4.4 32 51-84 7-38 (144)
286 1id1_A Putative potassium chan 91.5 0.22 7.4E-06 42.5 5.1 32 51-84 4-35 (153)
287 3klj_A NAD(FAD)-dependent dehy 91.4 0.13 4.4E-06 51.5 4.1 32 51-84 147-178 (385)
288 1y56_A Hypothetical protein PH 91.2 0.17 5.8E-06 52.3 4.9 61 170-238 265-325 (493)
289 3l4b_C TRKA K+ channel protien 91.1 0.2 6.7E-06 45.6 4.7 32 51-84 1-32 (218)
290 3c85_A Putative glutathione-re 91.1 0.22 7.6E-06 43.8 4.9 33 50-84 39-72 (183)
291 3hn2_A 2-dehydropantoate 2-red 91.0 0.16 5.4E-06 49.1 4.1 34 50-85 2-35 (312)
292 2cul_A Glucose-inhibited divis 90.9 0.075 2.6E-06 48.9 1.7 39 426-470 192-230 (232)
293 1lld_A L-lactate dehydrogenase 90.8 0.21 7.3E-06 48.2 4.9 33 50-84 7-41 (319)
294 1vg0_A RAB proteins geranylger 90.4 0.71 2.4E-05 49.2 8.8 39 47-87 5-44 (650)
295 1pzg_A LDH, lactate dehydrogen 90.3 0.28 9.4E-06 48.0 5.2 33 50-84 9-42 (331)
296 2v3a_A Rubredoxin reductase; a 90.2 0.24 8.3E-06 49.1 4.9 33 50-84 145-177 (384)
297 3g17_A Similar to 2-dehydropan 90.0 0.19 6.3E-06 48.2 3.6 33 50-84 2-34 (294)
298 1ges_A Glutathione reductase; 89.4 0.29 1E-05 49.8 4.8 32 51-84 168-199 (450)
299 2ew2_A 2-dehydropantoate 2-red 89.2 0.34 1.2E-05 46.3 4.8 33 50-84 3-35 (316)
300 3sx6_A Sulfide-quinone reducta 89.0 0.18 6.2E-06 51.1 2.8 108 50-225 4-112 (437)
301 4e12_A Diketoreductase; oxidor 88.9 0.39 1.3E-05 45.6 5.0 32 51-84 5-36 (283)
302 2gqw_A Ferredoxin reductase; f 88.9 0.35 1.2E-05 48.5 4.9 33 50-84 145-177 (408)
303 3h8l_A NADH oxidase; membrane 88.8 0.83 2.8E-05 45.6 7.6 62 161-235 217-278 (409)
304 2hjr_A Malate dehydrogenase; m 88.8 0.42 1.4E-05 46.6 5.1 33 50-84 14-47 (328)
305 2x5o_A UDP-N-acetylmuramoylala 88.7 0.33 1.1E-05 49.3 4.6 31 51-83 6-36 (439)
306 3ghy_A Ketopantoate reductase 88.7 0.4 1.4E-05 46.8 5.0 32 51-84 4-35 (335)
307 3gg2_A Sugar dehydrogenase, UD 88.5 0.39 1.3E-05 49.0 4.9 32 51-84 3-34 (450)
308 1kyq_A Met8P, siroheme biosynt 88.5 0.34 1.2E-05 45.9 4.2 33 49-83 12-44 (274)
309 1ks9_A KPA reductase;, 2-dehyd 88.4 0.42 1.4E-05 45.1 4.9 32 52-85 2-33 (291)
310 3dfz_A SIRC, precorrin-2 dehyd 88.4 0.44 1.5E-05 43.7 4.7 33 49-83 30-62 (223)
311 1z82_A Glycerol-3-phosphate de 88.4 0.41 1.4E-05 46.6 4.9 38 45-84 9-46 (335)
312 2dpo_A L-gulonate 3-dehydrogen 88.4 0.44 1.5E-05 46.3 5.0 33 50-84 6-38 (319)
313 3k6j_A Protein F01G10.3, confi 88.3 0.68 2.3E-05 47.2 6.6 34 49-84 53-86 (460)
314 2ewd_A Lactate dehydrogenase,; 88.3 0.42 1.4E-05 46.3 4.8 33 50-84 4-37 (317)
315 2r9z_A Glutathione amide reduc 88.2 0.39 1.3E-05 49.1 4.8 32 51-84 167-198 (463)
316 4g65_A TRK system potassium up 88.2 0.27 9.2E-06 50.4 3.5 33 50-84 3-35 (461)
317 3k96_A Glycerol-3-phosphate de 88.2 0.5 1.7E-05 46.6 5.4 33 50-84 29-61 (356)
318 2ywl_A Thioredoxin reductase r 88.0 0.32 1.1E-05 42.4 3.4 47 426-477 130-176 (180)
319 2y0c_A BCEC, UDP-glucose dehyd 87.7 0.49 1.7E-05 48.7 5.1 34 49-84 7-40 (478)
320 2raf_A Putative dinucleotide-b 87.7 0.55 1.9E-05 42.4 4.9 33 50-84 19-51 (209)
321 3ic9_A Dihydrolipoamide dehydr 87.3 0.48 1.6E-05 48.8 4.8 33 50-84 174-206 (492)
322 3lk7_A UDP-N-acetylmuramoylala 87.3 0.46 1.6E-05 48.5 4.6 33 50-84 9-41 (451)
323 1guz_A Malate dehydrogenase; o 87.2 0.59 2E-05 45.1 5.1 34 51-84 1-34 (310)
324 2v6b_A L-LDH, L-lactate dehydr 87.2 0.53 1.8E-05 45.3 4.8 32 51-84 1-34 (304)
325 4dio_A NAD(P) transhydrogenase 87.1 0.51 1.7E-05 47.3 4.6 33 50-84 190-222 (405)
326 3doj_A AT3G25530, dehydrogenas 87.1 0.65 2.2E-05 44.7 5.4 34 49-84 20-53 (310)
327 1jw9_B Molybdopterin biosynthe 86.8 0.52 1.8E-05 44.0 4.3 36 50-87 31-67 (249)
328 2qyt_A 2-dehydropantoate 2-red 86.7 0.35 1.2E-05 46.4 3.1 31 51-83 9-45 (317)
329 1ur5_A Malate dehydrogenase; o 86.6 0.65 2.2E-05 44.8 5.0 33 50-84 2-35 (309)
330 1t2d_A LDH-P, L-lactate dehydr 86.6 0.72 2.5E-05 44.8 5.3 33 50-84 4-37 (322)
331 3h28_A Sulfide-quinone reducta 86.6 0.36 1.2E-05 48.7 3.3 35 50-84 2-36 (430)
332 1zcj_A Peroxisomal bifunctiona 86.4 0.79 2.7E-05 46.9 5.8 33 50-84 37-69 (463)
333 1evy_A Glycerol-3-phosphate de 86.4 0.57 1.9E-05 46.2 4.6 31 52-84 17-47 (366)
334 2z3y_A Lysine-specific histone 86.4 2 7E-05 45.9 9.3 62 154-222 393-455 (662)
335 3ef6_A Toluene 1,2-dioxygenase 86.3 0.6 2.1E-05 46.8 4.8 33 50-84 143-175 (410)
336 3vtf_A UDP-glucose 6-dehydroge 86.2 0.68 2.3E-05 47.0 5.1 36 47-84 18-53 (444)
337 1bg6_A N-(1-D-carboxylethyl)-L 86.0 0.69 2.3E-05 45.2 4.9 32 51-84 5-36 (359)
338 3r8n_M 30S ribosomal protein S 85.9 0.72 2.5E-05 37.4 4.1 41 358-398 23-63 (114)
339 2a9f_A Putative malic enzyme ( 85.8 0.62 2.1E-05 46.3 4.4 34 49-84 187-221 (398)
340 1onf_A GR, grase, glutathione 85.8 0.66 2.3E-05 47.9 4.9 33 50-84 176-208 (500)
341 3oj0_A Glutr, glutamyl-tRNA re 85.8 0.41 1.4E-05 40.2 2.8 33 50-84 21-53 (144)
342 3hwr_A 2-dehydropantoate 2-red 85.8 0.65 2.2E-05 44.9 4.5 32 50-84 19-50 (318)
343 3kkj_A Amine oxidase, flavin-c 85.7 0.39 1.3E-05 43.5 2.8 37 430-472 292-328 (336)
344 3g79_A NDP-N-acetyl-D-galactos 85.7 0.61 2.1E-05 47.9 4.5 34 50-85 18-53 (478)
345 4ffl_A PYLC; amino acid, biosy 85.4 0.81 2.8E-05 44.9 5.1 33 50-84 1-33 (363)
346 3l9w_A Glutathione-regulated p 85.4 0.77 2.6E-05 46.2 5.0 33 50-84 4-36 (413)
347 3qha_A Putative oxidoreductase 85.3 0.68 2.3E-05 44.2 4.4 33 50-84 15-47 (296)
348 3ego_A Probable 2-dehydropanto 85.2 0.81 2.8E-05 44.0 4.9 32 50-84 2-33 (307)
349 3fpz_A Thiazole biosynthetic e 85.2 0.18 6E-06 48.9 0.1 43 429-471 280-324 (326)
350 3eag_A UDP-N-acetylmuramate:L- 85.1 0.85 2.9E-05 44.3 5.0 33 50-84 4-37 (326)
351 3g0o_A 3-hydroxyisobutyrate de 85.0 0.84 2.9E-05 43.7 4.9 34 49-84 6-39 (303)
352 2xve_A Flavin-containing monoo 85.0 0.65 2.2E-05 47.5 4.3 32 51-84 198-229 (464)
353 3p2y_A Alanine dehydrogenase/p 85.0 0.7 2.4E-05 45.9 4.3 33 50-84 184-216 (381)
354 3ntd_A FAD-dependent pyridine 84.5 0.79 2.7E-05 47.9 4.9 32 51-84 152-183 (565)
355 2vns_A Metalloreductase steap3 84.4 1 3.4E-05 40.8 4.9 34 49-84 27-60 (215)
356 2o3j_A UDP-glucose 6-dehydroge 84.4 0.88 3E-05 46.8 5.0 35 50-84 9-43 (481)
357 3dtt_A NADP oxidoreductase; st 84.4 1 3.5E-05 41.7 5.0 34 49-84 18-51 (245)
358 1pjc_A Protein (L-alanine dehy 84.3 0.87 3E-05 44.9 4.8 32 51-84 168-199 (361)
359 1mv8_A GMD, GDP-mannose 6-dehy 84.1 0.73 2.5E-05 46.7 4.2 31 52-84 2-32 (436)
360 1vl6_A Malate oxidoreductase; 84.0 0.83 2.8E-05 45.3 4.4 34 49-84 191-225 (388)
361 2i6t_A Ubiquitin-conjugating e 83.9 0.81 2.8E-05 44.0 4.2 33 50-84 14-48 (303)
362 3c7a_A Octopine dehydrogenase; 83.7 0.68 2.3E-05 46.3 3.7 31 51-82 3-33 (404)
363 3oc4_A Oxidoreductase, pyridin 83.7 1.5 5.2E-05 44.4 6.4 112 51-225 3-115 (452)
364 1x13_A NAD(P) transhydrogenase 83.7 0.92 3.2E-05 45.5 4.7 33 50-84 172-204 (401)
365 3gvi_A Malate dehydrogenase; N 83.6 1.1 3.9E-05 43.4 5.2 33 50-84 7-40 (324)
366 1a5z_A L-lactate dehydrogenase 83.5 0.81 2.8E-05 44.3 4.1 32 51-84 1-34 (319)
367 3lxd_A FAD-dependent pyridine 83.4 0.99 3.4E-05 45.1 4.9 33 50-84 152-184 (415)
368 3qsg_A NAD-binding phosphogluc 83.4 0.81 2.8E-05 44.1 4.0 34 49-84 23-57 (312)
369 3urh_A Dihydrolipoyl dehydroge 83.4 0.76 2.6E-05 47.2 4.1 32 51-84 199-230 (491)
370 3fg2_P Putative rubredoxin red 83.3 0.99 3.4E-05 45.0 4.8 32 51-84 143-174 (404)
371 4a7p_A UDP-glucose dehydrogena 83.3 1.1 3.9E-05 45.4 5.2 34 49-84 7-40 (446)
372 1txg_A Glycerol-3-phosphate de 83.2 0.81 2.8E-05 44.2 4.0 30 52-83 2-31 (335)
373 4dll_A 2-hydroxy-3-oxopropiona 83.2 0.98 3.4E-05 43.6 4.5 34 49-84 30-63 (320)
374 3pef_A 6-phosphogluconate dehy 83.2 1.1 3.8E-05 42.3 4.9 32 51-84 2-33 (287)
375 4ezb_A Uncharacterized conserv 83.1 1 3.6E-05 43.4 4.7 34 49-84 23-57 (317)
376 1hyh_A L-hicdh, L-2-hydroxyiso 83.1 0.88 3E-05 43.7 4.1 32 51-84 2-35 (309)
377 1y6j_A L-lactate dehydrogenase 83.0 1 3.5E-05 43.6 4.5 33 50-84 7-41 (318)
378 2p4q_A 6-phosphogluconate dehy 82.9 1.2 4E-05 46.1 5.2 36 47-84 7-42 (497)
379 2uyy_A N-PAC protein; long-cha 82.8 1.5 5E-05 42.1 5.6 33 50-84 30-62 (316)
380 2h78_A Hibadh, 3-hydroxyisobut 82.7 0.97 3.3E-05 43.1 4.3 33 50-84 3-35 (302)
381 1l7d_A Nicotinamide nucleotide 82.7 1.1 3.7E-05 44.7 4.7 33 50-84 172-204 (384)
382 4b1b_A TRXR, thioredoxin reduc 82.6 0.89 3E-05 47.5 4.2 34 51-86 224-257 (542)
383 4huj_A Uncharacterized protein 82.5 0.83 2.8E-05 41.5 3.5 33 50-84 23-56 (220)
384 1jay_A Coenzyme F420H2:NADP+ o 82.3 1.4 4.8E-05 39.4 5.0 31 52-84 2-33 (212)
385 3c24_A Putative oxidoreductase 82.3 1.5 5.2E-05 41.4 5.4 33 50-84 11-44 (286)
386 3mog_A Probable 3-hydroxybutyr 82.2 1.3 4.3E-05 45.6 5.1 33 50-84 5-37 (483)
387 1vpd_A Tartronate semialdehyde 82.2 1 3.5E-05 42.7 4.2 33 50-84 5-37 (299)
388 3l6d_A Putative oxidoreductase 82.0 1.7 5.7E-05 41.7 5.6 34 49-84 8-41 (306)
389 1oju_A MDH, malate dehydrogena 82.0 1 3.5E-05 43.1 4.0 32 51-84 1-34 (294)
390 3tl2_A Malate dehydrogenase; c 81.9 1.3 4.4E-05 42.8 4.8 33 50-84 8-41 (315)
391 2pv7_A T-protein [includes: ch 81.8 1.9 6.5E-05 41.1 6.0 34 49-84 20-54 (298)
392 3pid_A UDP-glucose 6-dehydroge 81.8 1.4 4.7E-05 44.6 5.1 33 49-84 35-67 (432)
393 2eez_A Alanine dehydrogenase; 81.6 1.4 4.6E-05 43.6 4.9 33 50-84 166-198 (369)
394 3p7m_A Malate dehydrogenase; p 81.3 1.6 5.4E-05 42.3 5.2 33 50-84 5-38 (321)
395 3ggo_A Prephenate dehydrogenas 81.2 1.7 5.9E-05 41.8 5.4 34 49-84 32-67 (314)
396 3pdu_A 3-hydroxyisobutyrate de 81.2 0.97 3.3E-05 42.8 3.6 32 51-84 2-33 (287)
397 2q3e_A UDP-glucose 6-dehydroge 81.2 1 3.5E-05 46.1 4.0 35 50-84 5-39 (467)
398 3dgh_A TRXR-1, thioredoxin red 81.1 1.4 4.8E-05 45.0 5.1 33 51-85 188-220 (483)
399 1nyt_A Shikimate 5-dehydrogena 81.1 1.6 5.4E-05 41.1 5.0 32 50-83 119-150 (271)
400 2f1k_A Prephenate dehydrogenas 80.8 1.5 5.2E-05 41.1 4.8 31 52-84 2-32 (279)
401 3ldh_A Lactate dehydrogenase; 80.8 1.6 5.6E-05 42.4 5.1 34 49-84 20-55 (330)
402 3pqe_A L-LDH, L-lactate dehydr 80.7 1.4 4.9E-05 42.7 4.6 33 50-84 5-39 (326)
403 1ldn_A L-lactate dehydrogenase 80.5 1.9 6.6E-05 41.5 5.5 36 49-84 5-40 (316)
404 2wtb_A MFP2, fatty acid multif 80.4 1.8 6.3E-05 46.8 5.8 33 50-84 312-344 (725)
405 3gt0_A Pyrroline-5-carboxylate 80.4 1.8 6.1E-05 39.9 5.1 33 50-84 2-38 (247)
406 1zud_1 Adenylyltransferase THI 80.3 1.5 5.1E-05 40.8 4.5 35 50-86 28-63 (251)
407 1mo9_A ORF3; nucleotide bindin 80.2 1.4 4.8E-05 45.6 4.7 32 51-84 215-246 (523)
408 1yj8_A Glycerol-3-phosphate de 80.2 0.99 3.4E-05 44.6 3.4 32 51-84 22-60 (375)
409 3ius_A Uncharacterized conserv 80.0 1.7 6E-05 40.5 4.9 35 49-85 4-38 (286)
410 2g5c_A Prephenate dehydrogenas 80.0 1.8 6E-05 40.7 5.0 32 51-84 2-35 (281)
411 2vhw_A Alanine dehydrogenase; 79.9 1.7 5.7E-05 43.1 4.9 33 50-84 168-200 (377)
412 3nep_X Malate dehydrogenase; h 79.9 1.4 4.7E-05 42.6 4.2 32 51-84 1-34 (314)
413 3hyw_A Sulfide-quinone reducta 79.9 2.9 9.9E-05 42.0 6.8 68 162-238 200-267 (430)
414 1yqg_A Pyrroline-5-carboxylate 79.5 1.4 4.9E-05 40.8 4.1 31 52-84 2-33 (263)
415 4e21_A 6-phosphogluconate dehy 79.2 1.8 6.3E-05 42.5 4.9 33 50-84 22-54 (358)
416 2ahr_A Putative pyrroline carb 79.2 1.9 6.6E-05 39.9 4.9 33 50-84 3-35 (259)
417 3cky_A 2-hydroxymethyl glutara 79.1 1.5 5.3E-05 41.5 4.3 33 50-84 4-36 (301)
418 3h8v_A Ubiquitin-like modifier 78.9 1.9 6.5E-05 41.1 4.8 38 49-87 35-72 (292)
419 2egg_A AROE, shikimate 5-dehyd 78.9 2.1 7.2E-05 40.9 5.1 32 50-83 141-173 (297)
420 3rui_A Ubiquitin-like modifier 78.9 2.1 7.2E-05 41.7 5.2 35 50-86 34-69 (340)
421 4aj2_A L-lactate dehydrogenase 78.9 1.9 6.6E-05 41.9 4.9 34 49-84 18-53 (331)
422 2zqz_A L-LDH, L-lactate dehydr 78.8 1.6 5.6E-05 42.3 4.4 36 49-84 8-43 (326)
423 4dgk_A Phytoene dehydrogenase; 78.7 1.2 3.9E-05 45.7 3.5 37 50-88 1-38 (501)
424 3phh_A Shikimate dehydrogenase 78.3 2.1 7.1E-05 40.3 4.8 33 50-84 118-150 (269)
425 1ez4_A Lactate dehydrogenase; 77.9 1.7 5.9E-05 42.0 4.2 36 49-84 4-39 (318)
426 2zyd_A 6-phosphogluconate dehy 77.8 1.9 6.6E-05 44.2 4.8 33 50-84 15-47 (480)
427 4a9w_A Monooxygenase; baeyer-v 77.7 1.9 6.4E-05 41.4 4.5 32 50-84 163-194 (357)
428 2ph5_A Homospermidine synthase 77.6 4.5 0.00015 41.2 7.3 38 49-87 12-52 (480)
429 1dlj_A UDP-glucose dehydrogena 77.5 2 6.8E-05 43.0 4.7 30 52-84 2-31 (402)
430 2gf2_A Hibadh, 3-hydroxyisobut 77.5 1.9 6.4E-05 40.8 4.3 31 52-84 2-32 (296)
431 1pjq_A CYSG, siroheme synthase 77.3 1.8 6.2E-05 44.1 4.4 33 50-84 12-44 (457)
432 3ktd_A Prephenate dehydrogenas 77.3 2.5 8.7E-05 41.2 5.2 34 49-84 7-40 (341)
433 3o0h_A Glutathione reductase; 77.3 2 6.9E-05 43.9 4.8 33 50-84 191-223 (484)
434 3iwa_A FAD-dependent pyridine 77.1 2.9 9.9E-05 42.5 5.9 123 50-225 3-125 (472)
435 1p77_A Shikimate 5-dehydrogena 77.0 1.9 6.3E-05 40.6 4.1 33 50-84 119-151 (272)
436 2aef_A Calcium-gated potassium 77.0 1.3 4.3E-05 40.5 2.8 33 49-84 8-40 (234)
437 3zwc_A Peroxisomal bifunctiona 76.8 3.5 0.00012 44.7 6.6 34 49-84 315-348 (742)
438 2izz_A Pyrroline-5-carboxylate 76.8 2.3 7.8E-05 41.0 4.8 34 50-85 22-59 (322)
439 4dna_A Probable glutathione re 76.7 2.1 7.3E-05 43.4 4.8 33 50-84 170-202 (463)
440 3d0o_A L-LDH 1, L-lactate dehy 76.7 1.9 6.7E-05 41.5 4.2 35 50-84 6-40 (317)
441 1x0v_A GPD-C, GPDH-C, glycerol 76.6 1.2 4.1E-05 43.4 2.7 32 51-84 9-47 (354)
442 3vku_A L-LDH, L-lactate dehydr 76.5 2 6.9E-05 41.7 4.2 34 49-84 8-43 (326)
443 3e8x_A Putative NAD-dependent 76.5 2.7 9.2E-05 38.1 5.0 34 49-84 20-54 (236)
444 1zej_A HBD-9, 3-hydroxyacyl-CO 76.3 2.6 9E-05 40.2 4.9 33 49-84 11-43 (293)
445 2rcy_A Pyrroline carboxylate r 76.2 2 6.9E-05 39.8 4.1 32 51-84 5-40 (262)
446 1wdk_A Fatty oxidation complex 76.2 2.4 8.1E-05 45.9 5.1 33 50-84 314-346 (715)
447 4gwg_A 6-phosphogluconate dehy 76.1 2.4 8.2E-05 43.5 4.9 33 50-84 4-36 (484)
448 1pgj_A 6PGDH, 6-PGDH, 6-phosph 76.1 2.1 7.2E-05 43.9 4.5 32 51-84 2-33 (478)
449 3b1f_A Putative prephenate deh 76.0 2.7 9.2E-05 39.6 5.0 34 51-84 7-40 (290)
450 3u5c_S 40S ribosomal protein S 75.9 2.6 8.9E-05 35.6 4.2 39 358-396 37-75 (146)
451 3vh1_A Ubiquitin-like modifier 75.8 2.7 9.2E-05 44.1 5.2 35 50-86 327-362 (598)
452 3tri_A Pyrroline-5-carboxylate 75.8 3 0.0001 39.4 5.2 33 50-84 3-38 (280)
453 4g6h_A Rotenone-insensitive NA 75.6 1.5 5.2E-05 45.2 3.3 36 47-84 39-74 (502)
454 2pgd_A 6-phosphogluconate dehy 75.6 2.4 8.1E-05 43.5 4.7 32 51-84 3-34 (482)
455 3fi9_A Malate dehydrogenase; s 75.6 2.7 9.2E-05 41.1 4.9 35 50-84 8-43 (343)
456 1yb4_A Tartronic semialdehyde 75.3 1.4 4.8E-05 41.6 2.7 31 50-82 3-33 (295)
457 3u62_A Shikimate dehydrogenase 75.0 2.9 9.9E-05 38.9 4.8 31 52-84 110-141 (253)
458 3j20_O 30S ribosomal protein S 75.0 3.2 0.00011 35.2 4.5 39 358-396 30-68 (148)
459 1m6i_A Programmed cell death p 75.0 1.2 3.9E-05 46.0 2.2 38 48-85 9-46 (493)
460 3h5n_A MCCB protein; ubiquitin 74.8 2.9 0.0001 41.0 5.0 36 50-87 118-154 (353)
461 3don_A Shikimate dehydrogenase 74.7 2.6 9.1E-05 39.8 4.5 33 50-84 117-150 (277)
462 3jyo_A Quinate/shikimate dehyd 74.6 3.2 0.00011 39.4 5.0 34 49-84 126-160 (283)
463 1mld_A Malate dehydrogenase; o 74.5 2.6 9E-05 40.6 4.5 33 51-85 1-36 (314)
464 3iz6_M 40S ribosomal protein S 74.5 3.1 0.00011 35.4 4.3 39 358-396 35-73 (152)
465 3dfu_A Uncharacterized protein 74.4 0.99 3.4E-05 41.6 1.3 33 49-83 5-37 (232)
466 3vrd_B FCCB subunit, flavocyto 74.2 0.83 2.8E-05 45.3 0.8 58 170-236 210-267 (401)
467 3ond_A Adenosylhomocysteinase; 74.2 2.9 9.9E-05 42.8 4.8 33 50-84 265-297 (488)
468 2rir_A Dipicolinate synthase, 74.2 3 0.0001 39.7 4.8 33 50-84 157-189 (300)
469 3tnl_A Shikimate dehydrogenase 74.2 3.3 0.00011 40.0 5.0 34 49-84 153-187 (315)
470 1i36_A Conserved hypothetical 74.1 2.5 8.5E-05 39.2 4.1 30 52-83 2-31 (264)
471 1y8q_A Ubiquitin-like 1 activa 74.1 2.6 9E-05 41.2 4.4 35 50-86 36-71 (346)
472 3d4o_A Dipicolinate synthase s 74.0 3.4 0.00012 39.2 5.1 33 50-84 155-187 (293)
473 1nvt_A Shikimate 5'-dehydrogen 74.0 3.2 0.00011 39.3 4.9 31 50-83 128-158 (287)
474 2hk9_A Shikimate dehydrogenase 74.0 2.4 8.3E-05 39.9 4.0 33 50-84 129-161 (275)
475 2x0j_A Malate dehydrogenase; o 73.7 2.9 9.9E-05 39.9 4.5 33 51-83 1-33 (294)
476 4gbj_A 6-phosphogluconate dehy 73.7 2.1 7.3E-05 40.8 3.6 34 49-84 4-37 (297)
477 2xzm_M RPS18E; ribosome, trans 73.5 3.6 0.00012 35.1 4.5 39 358-396 37-75 (155)
478 2d4a_B Malate dehydrogenase; a 73.4 2.6 8.8E-05 40.5 4.1 31 52-84 1-32 (308)
479 3d1l_A Putative NADP oxidoredu 73.3 2.7 9.1E-05 39.1 4.1 32 51-84 11-43 (266)
480 3r6d_A NAD-dependent epimerase 73.2 4.3 0.00015 36.2 5.4 32 51-84 6-39 (221)
481 4gsl_A Ubiquitin-like modifier 73.2 3.4 0.00012 43.4 5.2 36 50-87 326-362 (615)
482 3h2s_A Putative NADH-flavin re 73.1 3.7 0.00013 36.6 4.9 31 52-84 2-33 (224)
483 3ojo_A CAP5O; rossmann fold, c 72.8 2.6 8.7E-05 42.6 4.0 33 50-84 11-43 (431)
484 3ew7_A LMO0794 protein; Q8Y8U8 72.8 3.8 0.00013 36.3 4.9 31 52-84 2-33 (221)
485 3dhn_A NAD-dependent epimerase 72.6 3.9 0.00013 36.5 4.9 33 50-84 4-37 (227)
486 3o8q_A Shikimate 5-dehydrogena 72.4 4.2 0.00014 38.5 5.3 33 49-83 125-158 (281)
487 3orq_A N5-carboxyaminoimidazol 72.3 5.7 0.00019 39.1 6.5 33 50-84 12-44 (377)
488 2xag_A Lysine-specific histone 72.3 6.9 0.00024 43.1 7.6 57 159-222 569-626 (852)
489 1leh_A Leucine dehydrogenase; 72.1 3.8 0.00013 40.3 5.0 33 49-83 172-204 (364)
490 2vqe_M 30S ribosomal protein S 72.1 2.2 7.5E-05 35.2 2.7 39 358-396 24-62 (126)
491 4dsg_A UDP-galactopyranose mut 72.0 4.4 0.00015 41.4 5.8 60 153-223 207-268 (484)
492 2e1m_C L-glutamate oxidase; L- 71.9 1.3 4.6E-05 38.9 1.5 39 429-471 114-152 (181)
493 3pwz_A Shikimate dehydrogenase 71.8 4.1 0.00014 38.3 5.0 34 49-84 119-153 (272)
494 4gx0_A TRKA domain protein; me 71.7 3.4 0.00012 43.1 4.9 32 51-84 349-380 (565)
495 3gpi_A NAD-dependent epimerase 71.6 4.3 0.00015 37.8 5.2 32 51-84 4-35 (286)
496 2gcg_A Glyoxylate reductase/hy 71.3 9.1 0.00031 37.0 7.5 33 50-84 155-187 (330)
497 2xxj_A L-LDH, L-lactate dehydr 71.3 3.8 0.00013 39.4 4.7 34 51-84 1-34 (310)
498 3fbt_A Chorismate mutase and s 71.3 3.6 0.00012 39.0 4.5 34 49-84 121-155 (282)
499 2iz1_A 6-phosphogluconate dehy 71.2 3.4 0.00012 42.3 4.6 32 51-84 6-37 (474)
500 3t4e_A Quinate/shikimate dehyd 71.1 4.3 0.00015 39.0 5.1 34 49-84 147-181 (312)
No 1
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.8e-74 Score=592.01 Aligned_cols=380 Identities=29% Similarity=0.507 Sum_probs=334.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHH
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (481)
.++||+|||||++|++||+.|++ .|.+|+|||+. .+++++.++|+|+||+++..... ..|......+....+
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~--~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~-----~~~~~~~~~~~~~~l 98 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGK--RGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASP-----RNFLSGNPHFCKSAL 98 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSG-----GGEEESSTTTTHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCH-----HHHhhcCHHHHHHHH
Confidence 46899999999999999999999 79999999965 67889999999999999865322 123233344556677
Q ss_pred hcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccC
Q 011610 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMN 207 (481)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~ 207 (481)
..|.+.+..+|++..|+++.....+++|| ...+..+.+.|.+.+++.|++|+++++|+++..++ +.+.|.+.+
T Consensus 99 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~-~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~--~~~~V~~~~---- 171 (417)
T 3v76_A 99 ARYRPQDFVALVERHGIGWHEKTLGQLFC-DHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTA--SGFRVTTSA---- 171 (417)
T ss_dssp HHSCHHHHHHHHHHTTCCEEECSTTEEEE-SSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TEEEEEETT----
T ss_pred HhcCHHHHHHHHHHcCCCcEEeeCCEEee-CCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEEEEEECC----
Confidence 89999999999999999999888899998 67888999999999999999999999999998875 668888774
Q ss_pred ceEEEEcCeEEEccCCC--------hhHHHHHHHcCCCcccCCCceeEeeeCc---cccccccCceeccEEEEEEecCcc
Q 011610 208 LVECIEADYLLIASGSS--------QQGHRLAAQLGHSIVDPVPSLFTFKIAD---SQLTELSGVSFPKVVAKLKLENVQ 276 (481)
Q Consensus 208 ~~~~i~ad~VIlAtG~~--------g~g~~la~~~G~~i~~~~p~l~~~~~~~---~~~~~l~G~~~~~~~~~~~~~~~~ 276 (481)
+ +++||.||+|||+. ++++.+++++|+++.++.|+++++.+.+ ++++.|+|++++ +.+++ ++
T Consensus 172 -g-~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~~i~~~~p~l~~~~~~~~~~~~~~~l~G~~~~-~~~~~--~~-- 244 (417)
T 3v76_A 172 -G-TVDAASLVVASGGKSIPKMGATGLAYRIAEQFGLPVVETRPALVPLTLDQAQLAKLGALAGVAAD-AEARF--GK-- 244 (417)
T ss_dssp -E-EEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTCCEEEEEEESCCEECCHHHHHHTGGGTTCEEE-EEEEE--TT--
T ss_pred -c-EEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCCCEecccceeeeEEecCccccccccCCCCcee-EEEEE--CC--
Confidence 4 89999999999964 4789999999999999999999999987 667899999986 66554 32
Q ss_pred CCCCccceecCeEEEeccccchhhcccchhhHHHhHccCceeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhhCCCc
Q 011610 277 RSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPE 356 (481)
Q Consensus 277 ~~~~~~~~~Ge~lft~~glsG~~il~lS~~~~~~~~~~~~~~~~~~d~~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 356 (481)
....||++|||+|+|||+||++|+++.+ ...+.||++|+++.+++ +.+....++++.+.+.+..
T Consensus 245 -----~~~~~~~lft~~G~sGp~il~~S~~~~~-------~~~~~id~~p~~~~~~~---~~~~~~~~~~~~~~~~l~~- 308 (417)
T 3v76_A 245 -----AAFREAVLITHRGLSGPAILQISSYWRE-------GEEIVLRLMPDIDIASI---LKGMRRANGRQAVQTALAD- 308 (417)
T ss_dssp -----EEEEEEEEECSSEEESHHHHHHTTTCCT-------TCCEEEEESTTSCHHHH---HHHHHHHTCSSBHHHHHTT-
T ss_pred -----EeeeeeeEEECCCcchHHHHHHHHHhhC-------CCEEEEECCCCCCHHHH---HHHHHHhchhhhHHHHHHH-
Confidence 3467899999999999999999998632 24688999999997654 5566677888889988887
Q ss_pred cchhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhccCeEEEcccCCCceeEEecCCCCCCCCCcccccccCCCCeE
Q 011610 357 FCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTMESKIHPRLF 436 (481)
Q Consensus 357 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~v~~~~~~~~a~vt~GGv~~~ei~~~t~esk~~~gLy 436 (481)
.||+|+++.+++.+++ +++++++++++++++|++.||+++|+++|+.+|++|+||+|||+++||||+|||||.+||||
T Consensus 309 -~lp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~~~a~vt~GGV~~~ei~~~tmesk~~~gLy 386 (417)
T 3v76_A 309 -ILPRRLAQFFADEAKL-TGRMLADLSDKTIDALASSIQVWAVKPAGSEGYRTAEVTLGGVDTRALDSRTMQAKEVPGLY 386 (417)
T ss_dssp -TSCHHHHHHHHHHTTC-TTCBGGGCCHHHHHHHHHHHHSEEECCCEECCTTTCSEEEEEECGGGBCTTTCBBTTSTTEE
T ss_pred -HhhHHHHHHHHHhcCC-CCCchhhCCHHHHHHHHHHhcCCEEEecccCCcceEEEeCCCCccccCChhhccccCCCCeE
Confidence 8999999999999999 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeecccCcchHHHHHHHHHHHHHHHHH
Q 011610 437 FAGEVLNVDGVTGGFNFQNAWSGGYIAGTSI 467 (481)
Q Consensus 437 ~~GE~ldv~g~~GGynl~~A~~sG~~AG~~a 467 (481)
||||+|||||+||||||||||+|||+||+++
T Consensus 387 ~aGE~lD~~~~~GGynlq~a~stG~~ag~~~ 417 (417)
T 3v76_A 387 FVGECVDVTGWLGGYNFQWAWASGFVAGQDV 417 (417)
T ss_dssp ECGGGBSEEECSSSHHHHHHHHHHHHHHHHC
T ss_pred EEEEeEecccCCCCHHHHHHHHHHHHHhCcC
Confidence 9999999999999999999999999999863
No 2
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=100.00 E-value=4.8e-70 Score=560.70 Aligned_cols=382 Identities=27% Similarity=0.441 Sum_probs=327.5
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
++||+|||||++|+++|+.|++ .|.+|+|||+. .+++++.++|+|+||++|..+.+ ..+......+....+.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~--~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~-----~~~~~~~~~~~~~~l~ 76 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAK--LGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTP-----AHYLSQNPHFVKSALA 76 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCG-----GGEECSCTTSTHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHh--CCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCH-----HHhccCCHHHHHHHHH
Confidence 4899999999999999999999 78999999976 57888889999999999865432 1222233445556678
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEec----CCCCeEEEEEeec
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSD----NAGRKFLLKVEKR 204 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~----~~~~~~~V~~~~~ 204 (481)
.|++.+..+|++.+|+++...+.+++||.+ .+..+.+.|.+.+++.||+++++++|+++..+ + +.+.|++.+
T Consensus 77 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~-~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~--~~~~v~~~~- 152 (401)
T 2gqf_A 77 RYTNWDFISLVAEQGITYHEKELGQLFCDE-GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEK--VRFVLQVNS- 152 (401)
T ss_dssp HSCHHHHHHHHHHTTCCEEECSTTEEEETT-CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS--CCEEEEETT-
T ss_pred hCCHHHHHHHHHhCCCceEECcCCEEccCC-CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC--CeEEEEECC-
Confidence 889999999999999998877889999977 88899999999999999999999999999876 4 447777664
Q ss_pred ccCceEEEEcCeEEEccCCC--------hhHHHHHHHcCCCcccCCCceeEeeeC-cccc-ccccCceeccEEEEEEecC
Q 011610 205 TMNLVECIEADYLLIASGSS--------QQGHRLAAQLGHSIVDPVPSLFTFKIA-DSQL-TELSGVSFPKVVAKLKLEN 274 (481)
Q Consensus 205 ~~~~~~~i~ad~VIlAtG~~--------g~g~~la~~~G~~i~~~~p~l~~~~~~-~~~~-~~l~G~~~~~~~~~~~~~~ 274 (481)
+ +++||.||+|||+. |+++.+++++|+++.|+.|.++++.+. ++.+ ..++|.+++ ..+.+. |
T Consensus 153 ----g-~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i~~~~p~l~~~~~~~~~~~~~~l~g~~~~-~~~~i~--G 224 (401)
T 2gqf_A 153 ----T-QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPFTYRETDKFLTALSGISLP-VTITAL--C 224 (401)
T ss_dssp ----E-EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEEESCCEECCGGGGGGGGGTTCEEE-EEEEET--T
T ss_pred ----C-EEECCEEEECCCCccCCCCCCChHHHHHHHHCCCCcccCcceeeceecCCchhhcccCCCeeee-eEEEEc--C
Confidence 3 79999999999964 478999999999999999999999863 3445 789999885 455442 3
Q ss_pred ccCCCCccceecCeEEEeccccchhhcccchhhHHHhHccCceeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhhCC
Q 011610 275 VQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCP 354 (481)
Q Consensus 275 ~~~~~~~~~~~Ge~lft~~glsG~~il~lS~~~~~~~~~~~~~~~~~~d~~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 354 (481)
+ ....||++|||+|+|||+++++|+++.+ ...+.||++|+++.+++. ....+.++++++.+.+.
T Consensus 225 ~------~~~~g~~l~t~~g~sG~~~l~~s~~~~~-------~~~~~i~~~p~~~~~~~~---~~~~~~~~~~~~~~~l~ 288 (401)
T 2gqf_A 225 G------KSFYNQLLFTHRGISGPAVLQISNYWQP-------TESVEIDLLPNHNVEEEI---NQAKQSSPKQMLKTILV 288 (401)
T ss_dssp S------CEEEEEEEECSSEEESHHHHHHTTTCCT-------TCCEEEESCSSSCHHHHH---HHHHHHCTTSBHHHHHT
T ss_pred C------ceEEeCEEEECCCccHHHHHHHHHHHhc-------CCEEEEECCCCCCHHHHH---HHHhhhcccccHHHHhh
Confidence 1 1256999999999999999999997632 257788999999987773 22232567888999988
Q ss_pred CccchhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhccCeEEEcccCCCceeEEecCCCCCCCCCcccccccCCCC
Q 011610 355 PEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTMESKIHPR 434 (481)
Q Consensus 355 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~v~~~~~~~~a~vt~GGv~~~ei~~~t~esk~~~g 434 (481)
. .||+|+++.+++..+++ +++++++++++++.|++.||+++|+++|+.+|++|+||+|||+++||||+|||||.+||
T Consensus 289 ~--~lp~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~~~a~vt~GGv~~~~~~~~tmes~~~~g 365 (401)
T 2gqf_A 289 R--LLPKKLVELWIEQGIVQ-DEVIANISKVRVKNLVDFIHHWEFTPNGTEGYRTAEVTMGGVDTKVISSKTMESNQVSG 365 (401)
T ss_dssp T--TSCHHHHHHHHHTTSSC-CCBGGGCCHHHHHHHHHHHHCEEECCSEECCTTTCSEEEEEECGGGBCTTTCBBSSSTT
T ss_pred h--hcCHHHHHHHHHHcCCC-CCchhhCCHHHHHHHHHHHhcCEEEecccCCcceeEEeCCccccccCChhhccccCCCC
Confidence 7 89999999999999997 68899999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeecccCcchHHHHHHHHHHHHHHHHHhH
Q 011610 435 LFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGK 469 (481)
Q Consensus 435 Ly~~GE~ldv~g~~GGynl~~A~~sG~~AG~~aa~ 469 (481)
||||||+|||||+||||||||||+|||+||++|++
T Consensus 366 ly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~~ 400 (401)
T 2gqf_A 366 LYFIGEVLDVTGWLGGYNFQWAWSSAYACALSISR 400 (401)
T ss_dssp EEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999864
No 3
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=100.00 E-value=4.8e-65 Score=531.43 Aligned_cols=408 Identities=31% Similarity=0.506 Sum_probs=347.9
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhH
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (481)
++++||+|||||++|+++|+.|++ .|.+|+|||+. .+++++..+|+++|++++... ...+...+.... .+....
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~--~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~--~~~~~~~~~~~~-~~~~~~ 98 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAE--EGANVLLLDKGNKLGRKLAISGGGRCNVTNRLP--LDEIVKHIPGNG-RFLYSA 98 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCHHHHHTGGGTCCCEECSC--HHHHHHTCTBTG-GGGHHH
T ss_pred cCCCCEEEECCcHHHHHHHHHHHH--CCCCEEEEECCCCCCceeEEeCCCceeccCccc--HHHHHHHhccCh-HHHHHH
Confidence 356899999999999999999999 78999999965 677888889999999988632 224555554433 344455
Q ss_pred HhcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeeccc
Q 011610 127 FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTM 206 (481)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~ 206 (481)
+..++..+..+|++..|+++.....+++||.+..+..+++.|.+.+++.||+|+++++|+++..++ +..+.|++.+
T Consensus 99 ~~~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~-~~v~~V~~~~--- 174 (447)
T 2i0z_A 99 FSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN-GQTKAVILQT--- 174 (447)
T ss_dssp HHHSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETT---
T ss_pred HHhcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC-CcEEEEEECC---
Confidence 667888899999999999988877889999888899999999999999999999999999998765 3447888765
Q ss_pred CceEEEEcCeEEEccCCC--------hhHHHHHHHcCCCcccCCCceeEeeeCcccccc--ccCceeccEEEEEE-ecCc
Q 011610 207 NLVECIEADYLLIASGSS--------QQGHRLAAQLGHSIVDPVPSLFTFKIADSQLTE--LSGVSFPKVVAKLK-LENV 275 (481)
Q Consensus 207 ~~~~~i~ad~VIlAtG~~--------g~g~~la~~~G~~i~~~~p~l~~~~~~~~~~~~--l~G~~~~~~~~~~~-~~~~ 275 (481)
+.+++||.||+|||+. |+++.+++++|+++.++.|.++++.+.+++.+. +.|+++.++.+.+. .+|
T Consensus 175 --G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g- 251 (447)
T 2i0z_A 175 --GEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTITELFPTEVPILSNEPFIRDRSLQGLALRDINLSVLNPKG- 251 (447)
T ss_dssp --CCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCCEEEEEECSCCEECCCHHHHTTTTTTCEEEEEEEEECC----
T ss_pred --CCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCCcccCcceeeeeecCCcccccccccCcccCCeEEEEEecCC-
Confidence 4569999999999964 478999999999999999999999988766666 88988655555552 333
Q ss_pred cCCCCccceecCeEEEeccccchhhcccchhhHHHhHccC-ceeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhhCC
Q 011610 276 QRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLFSSC-YKGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCP 354 (481)
Q Consensus 276 ~~~~~~~~~~Ge~lft~~glsG~~il~lS~~~~~~~~~~~-~~~~~~~d~~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 354 (481)
+++..+.||++|||+++|||+++++|+++.+.+.... ....+.+|++|.++.+++.+.|.+.....+++++.+.+.
T Consensus 252 ---~r~~~~~ge~~~t~~~~~g~~~l~~s~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~ 328 (447)
T 2i0z_A 252 ---KAIISHKMDMLFTHFGLSGPAALRCSQFVVKALKKFKTNTIQMSIDALPEENSEQLFQRMLKQMKEDPKKGIKNVLK 328 (447)
T ss_dssp ----CEEEEEEEEEECSSEEESHHHHHHHHHHHHHHHHHCCSCEEEEEESCTTSCHHHHHHHHHHHHTTSTTSBHHHHTT
T ss_pred ---ceEecccCCeEEECCcccHHHHHHHHHHHHHHHhcccCCceEEEEECCCCCCHHHHHHHHHHHHHhChhhhHHHhcc
Confidence 3356677999999999999999999988765542211 125688999999999999998888777778888999887
Q ss_pred CccchhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhccCeEEEcccCCCceeEEecCCCCCCCCCcccccccCCCC
Q 011610 355 PEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTMESKIHPR 434 (481)
Q Consensus 355 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~v~~~~~~~~a~vt~GGv~~~ei~~~t~esk~~~g 434 (481)
. .+|+++++.+++..+++++++++++++++++.|.+.++++||++.++.+|..|+||+|||+++|+|++|||+|++||
T Consensus 329 ~--~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~T~GGv~~~~i~~~t~~~~~i~G 406 (447)
T 2i0z_A 329 G--YVPERYFLFLLEKNEIDGSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGGVSVKEINPKEMSSKFTNG 406 (447)
T ss_dssp T--SSCHHHHHHHHHHTTCCTTSBGGGSCHHHHHHHHHHHHHEEEEECEECCGGGCSSEEEEECGGGEETTTTEESSSBT
T ss_pred c--cChHHHHHHHHHHcCCCcCCchhhCCHHHHHHHHHHhhCCEEEecCCCCccEEEEeCCceeeecccccccccCcCCC
Confidence 6 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeecccCcchHHHHHHHHHHHHHHHHHhHHhh
Q 011610 435 LFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSN 472 (481)
Q Consensus 435 Ly~~GE~ldv~g~~GGynl~~A~~sG~~AG~~aa~~~~ 472 (481)
||||||++||+|+||||||||||+|||+||++|+++++
T Consensus 407 Ly~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~~~ 444 (447)
T 2i0z_A 407 LYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENAK 444 (447)
T ss_dssp EEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999988764
No 4
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.93 E-value=2.7e-25 Score=238.19 Aligned_cols=376 Identities=19% Similarity=0.194 Sum_probs=207.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCC-------cchhHHhhcc-----C
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHC-------ADKMILAGHY-----P 116 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~-------~~~~~~~~~~-----~ 116 (481)
.+||+|||||++|++||+.|++ .|++|+|||+. ..+++...++++.+ ..+... .+...+...+ .
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~--~G~~V~vlEk~~~~gg~s~~a~gg~~-~~~~~~~~~~g~~ds~~~~~~~~~~~g~~ 202 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATD--SGAKVILIEKEPVIGGNAKLAAGGMN-AAWTDQQKAKKITDSPELMFEDTMKGGQN 202 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTTGGGCCSCEE-CSSCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCCCCCchhhcCceEE-eCCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 6899999999999999999999 79999999976 45555555555543 222110 0111111111 0
Q ss_pred CCChhchhhHHhcCChHHHHHHHHhcCCccee--ecCCeeeec-----C--CChHHHHHHHHHHHHhCCCEEEcCceEEE
Q 011610 117 RGHKEFRGSFFSLHGPMDTMSWFSDHGVELKT--EDDGRVFPV-----S--DSSSSVIDCLLTEAKHRGVVLQTGKVVTT 187 (481)
Q Consensus 117 ~~~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~--~~~g~~~p~-----~--~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~ 187 (481)
.....++..+. . ...+.++|+.+.|+++.. ...+..+|. . .....+...|.+.+++.||+|+++++|++
T Consensus 203 ~~~~~~~~~~~-~-~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~ 280 (571)
T 1y0p_A 203 INDPALVKVLS-S-HSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIE 280 (571)
T ss_dssp CSCHHHHHHHH-H-HHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEE
T ss_pred CCCHHHHHHHH-H-ccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeE
Confidence 11223332221 1 234677899999988743 222333322 1 23567889999999999999999999999
Q ss_pred EEecCCCCeEEEEEeecccCceEEEEcCeEEEccCC--------------------------ChhHHHHHHHcCCCcccC
Q 011610 188 ASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS--------------------------SQQGHRLAAQLGHSIVDP 241 (481)
Q Consensus 188 i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------------------~g~g~~la~~~G~~i~~~ 241 (481)
|..++++..++|.+.+ .++...++.||.||+|||+ +|+++.++.++|+.+..+
T Consensus 281 l~~~~~g~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg~~~n~~~~~~~~p~~~~~~~~~~~~~tGdg~~~a~~~Ga~~~~~ 359 (571)
T 1y0p_A 281 VLKDDKGTVKGILVKG-MYKGYYWVKADAVILATGGFAKNNERVAKLDPSLKGFISTNQPGAVGDGLDVAENAGGALKDM 359 (571)
T ss_dssp EEECTTSCEEEEEEEE-TTTEEEEEECSEEEECCCCCTTCHHHHHHHCGGGTTCCBCSCTTCSSHHHHHHHHTTCCEECT
T ss_pred eEEcCCCeEEEEEEEe-CCCcEEEEECCeEEEeCCCcccCHHHHHHhCccccCCcccCCCCCchHHHHHHHHcCCcEeCC
Confidence 9875312445566552 1222347999999999996 246788999999998764
Q ss_pred CCce-eEeeeCccccccccCceeccEEEEEEecCccCCCCccceecCeEEEeccccchhhcccchhhHHHhHccCceeEE
Q 011610 242 VPSL-FTFKIADSQLTELSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLFSSCYKGML 320 (481)
Q Consensus 242 ~p~l-~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~Ge~lft~~glsG~~il~lS~~~~~~~~~~~~~~~~ 320 (481)
.... .|............+++... .+.+..+| +++ ..|+ ..+...+.+++. ..+....+
T Consensus 360 ~~~~~~p~~~~~~~~~~~~~~~~~g-~i~vn~~G----~RF---~~E~--~~~~~~~~a~~~----------~~~~~~~~ 419 (571)
T 1y0p_A 360 QYIQAHPTLSVKGGVMVTEAVRGNG-AILVNREG----KRF---VNEI--TTRDKASAAILA----------QTGKSAYL 419 (571)
T ss_dssp TCEEEEEEEETTTCSBCCTHHHHTT-CEEECTTS----CCC---SCTT--SCHHHHHHHHHT----------SGGGCEEE
T ss_pred cceeecCcccCCCCceeeecccCCc-eEEECCCC----CCC---cCCC--CcHhHHHHHHHh----------CcCCCEEE
Confidence 4321 12111111000001111111 12222122 222 1222 111111111111 11122344
Q ss_pred EEecCCCCCHHHHHH--HHHHHHHhchhhhhhhhCCCccchhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHH-----
Q 011610 321 TVDFVPDLHIEDMQS--ILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARL----- 393 (481)
Q Consensus 321 ~~d~~p~~~~~~l~~--~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~----- 393 (481)
.+|- ..++. .+...... .. ......+++|+++.|++++...+.+ +.++.++..
T Consensus 420 i~d~------~~~~~~~~~~~~~~~-------g~-----~~~~~tl~ela~~~gi~~~~l~~tv--~~yn~~~~~g~D~~ 479 (571)
T 1y0p_A 420 IFDD------SVRKSLSKIDKYIGL-------GV-----APTADSLVKLGKMEGIDGKALTETV--ARYNSLVSSGKDTD 479 (571)
T ss_dssp EEEH------HHHHHCTTHHHHHHH-------TC-----CCEESSHHHHHHHHTSCHHHHHHHH--HHHHHHHHHTCCTT
T ss_pred EECh------HHHhhhhhHHHHhhC-------Ce-----EEEeCCHHHHHHHhCcCHHHHHHHH--HHHHHHHHcCCCcc
Confidence 3432 11100 00000000 00 1112234556666677665443333 444554432
Q ss_pred ---------hccCeEEEcccCCCceeEEecCCCCCCCCCc-ccccccCCCCeEEEEEEee-ccc--CcchHHHHHHHHHH
Q 011610 394 ---------LKHCTLEVAGKGQFKDEFVTAGGVPLSEISL-NTMESKIHPRLFFAGEVLN-VDG--VTGGFNFQNAWSGG 460 (481)
Q Consensus 394 ---------l~~~~~~v~~~~~~~~a~vt~GGv~~~ei~~-~t~esk~~~gLy~~GE~ld-v~g--~~GGynl~~A~~sG 460 (481)
+.+-||+..... ..+..|.|||.+++--. .+-+.++|||||+|||+.- ++| +.||.+|.+|+++|
T Consensus 480 f~k~~~~~~i~~~Pfya~~~~--p~~~~t~GGl~id~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fG 557 (571)
T 1y0p_A 480 FERPNLPRALNEGNYYAIEVT--PGVHHTMGGVMIDTKAEVMNAKKQVIPGLYGAGEVTGGVHGANRLGGNAISDIITFG 557 (571)
T ss_dssp TCCSCCCCCSCSSCEEEEEEE--EEEEEECCEEEBCTTCEEECTTSCEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHH
T ss_pred cCCCCCCCcCCCCCEEEEEEe--eeeeEecCCeEECCCceEECCCCCCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHH
Confidence 223454443322 23677999999886321 1224579999999999864 665 67999999999999
Q ss_pred HHHHHHHhHHhhH
Q 011610 461 YIAGTSIGKLSND 473 (481)
Q Consensus 461 ~~AG~~aa~~~~~ 473 (481)
|+||++||+++++
T Consensus 558 r~Ag~~aa~~~~~ 570 (571)
T 1y0p_A 558 RLAGEEAAKYSKK 570 (571)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHHhhh
Confidence 9999999987753
No 5
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.93 E-value=2.2e-25 Score=238.69 Aligned_cols=377 Identities=18% Similarity=0.183 Sum_probs=208.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCC------C-cchhHHhhcc-----
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGH------C-ADKMILAGHY----- 115 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~------~-~~~~~~~~~~----- 115 (481)
.++||+|||||++|++||+.|++ .|++|+|||+. .++++...++++.+ ..+.. . .+...+...+
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~--~G~~V~vlEk~~~~gg~s~~s~gg~~-~~~~~~~~~~g~~ds~~~~~~~~~~~~~ 196 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKK--AGANVILVDKAPFSGGNSMISAGGMN-AVGTKQQTAHGVEDKVEWFIEDAMKGGR 196 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH--HTCCEEEECSSSSSCTTGGGCCSCEE-CSSCHHHHHTTCCCCHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCCCCCcccccCceeE-ccCCHHHHHhCCCCCHHHHHHHHHHhcC
Confidence 56899999999999999999999 68999999976 45555555555543 22211 0 0111111110
Q ss_pred CCCChhchhhHHhcCChHHHHHHHHhcCCcceee--cCCeeeecC-------CChHHHHHHHHHHHHhCCCEEEcCceEE
Q 011610 116 PRGHKEFRGSFFSLHGPMDTMSWFSDHGVELKTE--DDGRVFPVS-------DSSSSVIDCLLTEAKHRGVVLQTGKVVT 186 (481)
Q Consensus 116 ~~~~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~--~~g~~~p~~-------~~a~~~~~~l~~~~~~~Gv~i~~~~~V~ 186 (481)
......++..+.. ...+.++|+.+.|+++... ..+..+|.. .....+++.|.+.+++.||+|+++++|+
T Consensus 197 ~~~~~~~~~~~~~--~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~ 274 (566)
T 1qo8_A 197 QQNDIKLVTILAE--QSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVV 274 (566)
T ss_dssp TCSCHHHHHHHHH--HHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEE
T ss_pred CCCCHHHHHHHHh--ccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEE
Confidence 1112233322222 2356788999999887531 123333321 1267788999999999999999999999
Q ss_pred EEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCC--------------------------ChhHHHHHHHcCCCccc
Q 011610 187 TASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS--------------------------SQQGHRLAAQLGHSIVD 240 (481)
Q Consensus 187 ~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------------------~g~g~~la~~~G~~i~~ 240 (481)
+|..++++..++|++.+ .++....+.||.||+|||+ +|+++.++.++|+.+..
T Consensus 275 ~l~~~~~g~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~s~~~~~~~~~~p~~~~~~~~~~~~~tGdg~~~a~~~Ga~~~~ 353 (566)
T 1qo8_A 275 KLVVNDDHSVVGAVVHG-KHTGYYMIGAKSVVLATGGYGMNKEMIAYYRPTMKDMTSSNNITATGDGVLMAKEIGASMTD 353 (566)
T ss_dssp EEEECTTSBEEEEEEEE-TTTEEEEEEEEEEEECCCCCTTCHHHHHHHCGGGTTCEECSCTTCSCHHHHHHHHTTBCEES
T ss_pred EEEECCCCcEEEEEEEe-CCCcEEEEEcCEEEEecCCcccCHHHHHHhCccccCCcccCCCCCCcHHHHHHHHcCCeEec
Confidence 99875312344566652 1222237999999999995 24678888889988876
Q ss_pred CCCceeEeeeCccccccccCcee--ccEEEEEEecCccCCCCccceecCeEEEeccccchhhcccchhhHHHhHccCcee
Q 011610 241 PVPSLFTFKIADSQLTELSGVSF--PKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLFSSCYKG 318 (481)
Q Consensus 241 ~~p~l~~~~~~~~~~~~l~G~~~--~~~~~~~~~~~~~~~~~~~~~~Ge~lft~~glsG~~il~lS~~~~~~~~~~~~~~ 318 (481)
+......-...... ..+....+ .. .+.+..+| +++.. |. ..+...+.+++. ..+...
T Consensus 354 ~~~~~~~p~~~~~~-~~~~~~~~~~~g-~i~vn~~G----~Rf~~---E~--~~~~~~~~~~~~----------~~~~~~ 412 (566)
T 1qo8_A 354 IDWVQAHPTVGKDS-RILISETVRGVG-AVMVNKDG----NRFIS---EL--TTRDKASDAILK----------QPGQFA 412 (566)
T ss_dssp TTCEEEEEEEESSS-CSBCCTHHHHTT-CEEECTTS----CCCSC---TT--SCHHHHHHHHHT----------SGGGCE
T ss_pred CcceeecccccCCc-cccchhhhccCC-eEEECCCC----CCccC---CC--CCHHHHHHHHHh----------CCCCcE
Confidence 55432221111100 00111000 11 11122122 22222 21 111111122221 111123
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhhCCCccchhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHH-----
Q 011610 319 MLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARL----- 393 (481)
Q Consensus 319 ~~~~d~~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~----- 393 (481)
.+.+|- ...+ ... .... .+..-. ......+++|++..|++++.....+ ++++.++..
T Consensus 413 ~~i~d~------~~~~-~~~-~~~~----~~~~~~----~~~~~tl~eLa~~~gi~~~~l~~tv--~~yn~~~~~g~d~~ 474 (566)
T 1qo8_A 413 WIIFDN------QLYK-KAK-MVRG----YDHLEM----LYKGDTVEQLAKSTGMKVADLAKTV--SDYNGYVASGKDTA 474 (566)
T ss_dssp EEEEEH------HHHH-HCH-HHHH----HHHTTC----CEEESSHHHHHHHTTCCHHHHHHHH--HHHHHHHHHSCCTT
T ss_pred EEEECh------HHhh-hhh-hhHH----HhhcCc----EEEeCCHHHHHHHhCCCHHHHHHHH--HHHHHHHhcCCCcc
Confidence 333331 1111 000 0000 000000 1112335666667777665433333 344555442
Q ss_pred ---------hccCeEEEcccCCCceeEEecCCCCCCCCCc-ccccccCCCCeEEEEEEe-eccc--CcchHHHHHHHHHH
Q 011610 394 ---------LKHCTLEVAGKGQFKDEFVTAGGVPLSEISL-NTMESKIHPRLFFAGEVL-NVDG--VTGGFNFQNAWSGG 460 (481)
Q Consensus 394 ---------l~~~~~~v~~~~~~~~a~vt~GGv~~~ei~~-~t~esk~~~gLy~~GE~l-dv~g--~~GGynl~~A~~sG 460 (481)
+.+-||+..... ..+..|.|||.+++--. .+-+.++|||||+|||+. .++| +.||.+|.+|+++|
T Consensus 475 fg~~~~~~~i~~~Pfya~~~~--p~~~~t~GGl~vd~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~G 552 (566)
T 1qo8_A 475 FGRADMPLNMTQSPYYAVKVA--PGIHHTMGGVAINTTASVLDLQSKPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFG 552 (566)
T ss_dssp TCCSCCCCCSCSSSEEEEEEE--EEEEEECCEECBCTTCEEEBTTSCEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHH
T ss_pred cCCCCCCCcCCCCCEEEEEEe--cccceecccEEECCCCeEECCCCCEeCCEEecccccCCCCCCCCCchhhHHHHHHHH
Confidence 223354443222 23677999999986321 122357999999999986 4665 67999999999999
Q ss_pred HHHHHHHhHHhh
Q 011610 461 YIAGTSIGKLSN 472 (481)
Q Consensus 461 ~~AG~~aa~~~~ 472 (481)
|+||++||++++
T Consensus 553 r~Ag~~aa~~~~ 564 (566)
T 1qo8_A 553 RIAGDNAAKHAL 564 (566)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh
Confidence 999999998775
No 6
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.92 E-value=3.2e-24 Score=226.85 Aligned_cols=375 Identities=19% Similarity=0.195 Sum_probs=201.5
Q ss_pred CCCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCcee-----ec-cCCC-cchhHHhhcc---
Q 011610 47 TSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCN-----VT-NGHC-ADKMILAGHY--- 115 (481)
Q Consensus 47 ~~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n-----~~-~~~~-~~~~~~~~~~--- 115 (481)
++.++||||||+|++|++||+.|++ .|++|+||||. ..++....++++-+. +. .... .+...+...+
T Consensus 38 ~~~~~DVvVVGaG~AGl~AA~~aa~--~G~~V~vlEk~~~~GG~s~~s~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~ 115 (510)
T 4at0_A 38 WDYEADVVVAGYGIAGVAASIEAAR--AGADVLVLERTSGWGGATALAGGFIYLGGGTPLQKACGFDDSPENMKTFMMAA 115 (510)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTTGGGSCCCEECCSSCHHHHHTTCCCCHHHHHHHHHHH
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCCCCCcchhcCcceecCCCCHHHHHhCCCCCHHHHHHHHHHH
Confidence 4567999999999999999999999 79999999976 445433333322110 00 0000 0111111110
Q ss_pred --CCCChhchhhHHhcCChHHHHHHHHhcCCcceee-----------cCCeeeec-------------------------
Q 011610 116 --PRGHKEFRGSFFSLHGPMDTMSWFSDHGVELKTE-----------DDGRVFPV------------------------- 157 (481)
Q Consensus 116 --~~~~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~-----------~~g~~~p~------------------------- 157 (481)
.......+..+. . ...+.++|+.+.|+++... ..+..+..
T Consensus 116 ~~~~~~~~~~~~~~-~-~~~~~i~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~g~e~~~~~~~~~~~~~r~~~~~~~~~ 193 (510)
T 4at0_A 116 LGPGADEEKITDYC-E-GSVEHYNWLVDCGVPFKESFWGEPGWEPPFDDGLMYSGGENAAPFNEIAAPAPRGHVPQMDGK 193 (510)
T ss_dssp SCSSCCHHHHHHHH-H-THHHHHHHHHHTTCCCCSCEECSSSSSCSSSCSEECCSSTTSTTGGGTSCCCCCEECCCCSSC
T ss_pred hCCCCCHHHHHHHH-H-hhHHHHHHHHHcCCeecccccCCcccccCCcccccccCcccccccccccCcccceeeeccccc
Confidence 111222222221 1 2356778999988876432 11111110
Q ss_pred ---CCCh-HHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcC-eEEEccCC---------
Q 011610 158 ---SDSS-SSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEAD-YLLIASGS--------- 223 (481)
Q Consensus 158 ---~~~a-~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad-~VIlAtG~--------- 223 (481)
.... ..+...|.+.+++.|++|+++++|++|..++++..++|.+.+ .++..++.|+ .||+|||+
T Consensus 194 ~~g~~~g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~--~g~~~~i~A~k~VVlAtGG~~~n~~m~~ 271 (510)
T 4at0_A 194 RTGEKGGGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ--YGKEVAVRARRGVVLATGSFAYNDKMIE 271 (510)
T ss_dssp BTTTBCTTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEE--TTEEEEEEEEEEEEECCCCCTTCHHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEE--CCcEEEEEeCCeEEEeCCChhhCHHHHH
Confidence 0012 278999999999999999999999999987314556677653 2223479995 99999995
Q ss_pred -----------------ChhHHHHHHHcCCCcccCCCceeEeeeCccccccccCceeccEEEEEEecCccCCCCccceec
Q 011610 224 -----------------SQQGHRLAAQLGHSIVDPVPSLFTFKIADSQLTELSGVSFPKVVAKLKLENVQRSSPYLTQVG 286 (481)
Q Consensus 224 -----------------~g~g~~la~~~G~~i~~~~p~l~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~G 286 (481)
+|++..++.++|..+..+....... ...+. .+.+ .+-+..+| +++..+.
T Consensus 272 ~~~p~~~~~~~~~~~~~tGdGi~ma~~~Ga~~~~m~~~~~~p-~~~~~--~~~~------~i~vn~~G----~RF~nE~- 337 (510)
T 4at0_A 272 AHAPRLIGRPGAAIEEHDGRSILMAQALGADLAHMDATEVAF-VCDPQ--LIVR------GILVNGRG----QRYVPED- 337 (510)
T ss_dssp HHCGGGTTCBCCSCTTCCCHHHHHHHTTTBCEECTTCEEEEE-CSCHH--HHTT------SEEECTTS----CBCSCTT-
T ss_pred HhCccccCCCCCCCCCCCHHHHHHHHHhCcCeecchhhhccC-ccChh--hccc------cEEECCCC----CCCCCCC-
Confidence 3467788888888876654432100 00110 1111 11122222 2333321
Q ss_pred CeEEEeccccchhhcccchhhHHHhHccCceeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhhCCCccchhHHHHHH
Q 011610 287 PMLVTHWGLSGPVILRLSAWGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKY 366 (481)
Q Consensus 287 e~lft~~glsG~~il~lS~~~~~~~~~~~~~~~~~~d~~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 366 (481)
. . +..-+.+++. +.+....+.+|- ..++. .. .............. .+ ...+++
T Consensus 338 --~-~-~~~~~~~~~~----------~~~~~~~~i~D~------~~~~~-~~---~~~~~~~~~~~~~~--~~-adtlee 390 (510)
T 4at0_A 338 --T-Y-SGRIGQMTLF----------HQDNQAFLIIDE------ASYEE-GA---AATTATPFLRVQPK--WA-AETVEE 390 (510)
T ss_dssp --S-C-HHHHHHCCCC----------CSTTCCEEEEEH------HHHHH-HH---HSCCSCGGGCCCCS--EE-ESSHHH
T ss_pred --c-c-HHHHHHHHHh----------CCCCeEEEEECH------HHHHh-hh---cccccccchhhhhc--cc-CCCHHH
Confidence 0 0 0000111110 111222333331 11111 00 00000000001111 11 234566
Q ss_pred HHHhcCCCCCCccccCCHHHHHHHHHHhcc--------------CeEEEcccCCCceeEEecCCCCCCCCCc-ccccccC
Q 011610 367 ILGREGLSGDTLWASVSNNSLISIARLLKH--------------CTLEVAGKGQFKDEFVTAGGVPLSEISL-NTMESKI 431 (481)
Q Consensus 367 ~~~~~~~~~~~~~~~l~~~~~~~l~~~l~~--------------~~~~v~~~~~~~~a~vt~GGv~~~ei~~-~t~esk~ 431 (481)
|+++.|++++...+.+ +.++.++..-++ -||+..... ......|.||+.+++--. .+-+.++
T Consensus 391 LA~~~g~~~~~l~~tv--~~yN~~~~~g~D~~fgk~~~~l~pi~~Pfya~~~~-~~~~~~t~GGl~~d~~~~Vl~~~g~~ 467 (510)
T 4at0_A 391 LESDMGLPAGALQSTV--EVYNKHAAEGSDPLLHKKSEWVKPIGTPVAALDLR-GFTLGFTLGGLRTTVNSEVLHVSGEP 467 (510)
T ss_dssp HHHHTTCCTTHHHHHH--HHHHHHHTTTCCTTTCCCGGGCCCCCSSEEEEECT-TCEEEEECCEECBCTTCEEEBTTSSE
T ss_pred HHHHhCcCHHHHHHHH--HHHHHHHhcCCCcccCCCcccccCCCCCEEEEEee-cCcccccCcCeeECCCCceECCCCCC
Confidence 7777777766544433 344444432111 355554431 123568999999986321 2234689
Q ss_pred CCCeEEEEEEe-eccc--CcchHHHHHHHHHHHHHHHHHhHHh
Q 011610 432 HPRLFFAGEVL-NVDG--VTGGFNFQNAWSGGYIAGTSIGKLS 471 (481)
Q Consensus 432 ~~gLy~~GE~l-dv~g--~~GGynl~~A~~sG~~AG~~aa~~~ 471 (481)
|||||+|||+. .++| +.||.+|..|+++||+||++||+.|
T Consensus 468 I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa~~~ 510 (510)
T 4at0_A 468 IPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAAKQA 510 (510)
T ss_dssp EEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHHCC-
T ss_pred cCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHHhcC
Confidence 99999999976 5654 6799999999999999999998653
No 7
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.92 E-value=1.1e-23 Score=225.97 Aligned_cols=352 Identities=17% Similarity=0.137 Sum_probs=204.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCC--CceEEecCCceeeccCCCcchhHHhh------ccCCCCh
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPL--SKVKISGGGRCNVTNGHCADKMILAG------HYPRGHK 120 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g--~k~~~sG~g~~n~~~~~~~~~~~~~~------~~~~~~~ 120 (481)
.++||+|||||++|++||+.|++ .|.+|+||||.... .+..++|+..++..+....+...+.. .+. ...
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~--~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~-~d~ 82 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQ--SGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYI-GDQ 82 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTC-SCH
T ss_pred ccCCEEEECcCHHHHHHHHHHHH--CCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCC-CCH
Confidence 36899999999999999999999 78999999987543 34445565556554421111111111 111 122
Q ss_pred hchhhHHhcCChHHHHHHHHhcCCcceeecCCeeeecC---------------------CChHHHHHHHHHHHHhCCCEE
Q 011610 121 EFRGSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVS---------------------DSSSSVIDCLLTEAKHRGVVL 179 (481)
Q Consensus 121 ~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~---------------------~~a~~~~~~l~~~~~~~Gv~i 179 (481)
..+..+. . ...+.++|+.++|+++.....+.+++.. .....++..|.+.+++.|++|
T Consensus 83 ~~v~~~~-~-~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i 160 (588)
T 2wdq_A 83 DAIEYMC-K-TGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTI 160 (588)
T ss_dssp HHHHHHH-H-HHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHH-H-hHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEE
Confidence 2222221 1 1246778899999988654444443211 113678899999999999999
Q ss_pred EcCceEEEEEec-CCCCeEEEEEeecccCceEEEEcCeEEEccCC--------------ChhHHHHHHHcCCCcccCCCc
Q 011610 180 QTGKVVTTASSD-NAGRKFLLKVEKRTMNLVECIEADYLLIASGS--------------SQQGHRLAAQLGHSIVDPVPS 244 (481)
Q Consensus 180 ~~~~~V~~i~~~-~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------~g~g~~la~~~G~~i~~~~p~ 244 (481)
+++++|++|..+ + +..++|.+.+..++....+.|+.||+|||+ +|+|+.++.++|+.+..+...
T Consensus 161 ~~~~~v~~L~~~~~-g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~y~~~~~~~~~tGdG~~ma~~aGa~l~~me~~ 239 (588)
T 2wdq_A 161 FSEWYALDLVKNQD-GAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMW 239 (588)
T ss_dssp EETEEEEEEEECTT-SCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEECTTCE
T ss_pred EeCcEEEEEEECCC-CEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccccCCcCCCCCchHHHHHHHHHcCCCEeChhHh
Confidence 999999999985 4 345567654312222347999999999995 468899999999998776533
Q ss_pred ee-EeeeCccccccc--cCceeccEEEEEEecCccCCCCccceecCeEEEecc----ccchhhcccchhhHHHhHccCc-
Q 011610 245 LF-TFKIADSQLTEL--SGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWG----LSGPVILRLSAWGARYLFSSCY- 316 (481)
Q Consensus 245 l~-~~~~~~~~~~~l--~G~~~~~~~~~~~~~~~~~~~~~~~~~Ge~lft~~g----lsG~~il~lS~~~~~~~~~~~~- 316 (481)
.+ |....... .+ .+++-.. .+-+ + ..|+.+..+|. -..|. --+++.+..++.+...
T Consensus 240 q~hpt~~~~~~--~l~~e~~rg~g-~ilv--n----------~~G~RF~~~~~~~~~el~~r-d~v~~ai~~~~~~~~~~ 303 (588)
T 2wdq_A 240 QFHPTGIAGAG--VLVTEGCRGEG-GYLL--N----------KHGERFMERYAPNAKDLAGR-DVVARSIMIEIREGRGC 303 (588)
T ss_dssp EEEEEEETTTC--CBCCTHHHHTT-CEEE--C----------TTCCCTHHHHCTTTGGGSCH-HHHHHHHHHHHHTTCSB
T ss_pred heecceecCCc--ceeeehhccCC-cEEE--C----------CCCCCCccccCcccchhccH-HHHHHHHHHHHHhCCCc
Confidence 22 11111110 00 0000001 1112 1 12333222121 00010 0012222233222211
Q ss_pred ----eeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhhCCCccchhHHHHHHHHHhc-CCCCCCccccCCHHHHHHHH
Q 011610 317 ----KGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGRE-GLSGDTLWASVSNNSLISIA 391 (481)
Q Consensus 317 ----~~~~~~d~~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~ 391 (481)
...+.+|+- .+..+. +. . .+| .+..+++.. |+|+.+
T Consensus 304 ~~~~~~~v~ld~~-~~~~~~----~~------------~------~~~--~i~e~~~~~~GiD~~~-------------- 344 (588)
T 2wdq_A 304 DGPWGPHAKLKLD-HLGKEV----LE------------S------RLP--GILELSRTFAHVDPVK-------------- 344 (588)
T ss_dssp CSTTCSBEEEECG-GGHHHH----HH------------H------HCH--HHHHHHHHHTCCCTTT--------------
T ss_pred cCCCCCeEEEecc-cCCHHH----HH------------H------Hhh--HHHHHHHHhCCCCCCC--------------
Confidence 112344431 111111 11 1 111 134555654 888753
Q ss_pred HHhccCeEEEcccCCCceeEEecCCCCCCCCCccccc------ccCCCCeEEEEEEe--eccc--CcchHHHHHHHHHHH
Q 011610 392 RLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTME------SKIHPRLFFAGEVL--NVDG--VTGGFNFQNAWSGGY 461 (481)
Q Consensus 392 ~~l~~~~~~v~~~~~~~~a~vt~GGv~~~ei~~~t~e------sk~~~gLy~~GE~l--dv~g--~~GGynl~~A~~sG~ 461 (481)
.|++|.. .+..|+|||.+++- .+++. .+.|||||+|||+. .++| +.||.+|..|+++|+
T Consensus 345 -----~~i~v~p-----~~h~t~GGi~vd~~-~~vl~~~~~~~g~~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~ 413 (588)
T 2wdq_A 345 -----EPIPVIP-----TCHYMMGGIPTKVT-GQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGR 413 (588)
T ss_dssp -----SCEEEEE-----EEEEECCBEEBCTT-CEEEEECTTSCEEEEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHH
T ss_pred -----CcEEEec-----cccccCceEEECCC-CCCcccccccCCCeeCCceeCccccccCCCCCCCCcchhHHHHHHHHH
Confidence 2344543 36789999999864 34543 35899999999975 5777 568999999999999
Q ss_pred HHHHHHhHHhh
Q 011610 462 IAGTSIGKLSN 472 (481)
Q Consensus 462 ~AG~~aa~~~~ 472 (481)
+||++||+++.
T Consensus 414 ~Ag~~aa~~~~ 424 (588)
T 2wdq_A 414 AAGLHLQESIA 424 (588)
T ss_dssp HHHHTHHHHHH
T ss_pred HHHHHHHHhhh
Confidence 99999988764
No 8
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.92 E-value=1.7e-23 Score=225.06 Aligned_cols=353 Identities=16% Similarity=0.154 Sum_probs=201.8
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCC-c-eEEecCCceeeccCCCcchhHHhh------ccCCCC
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLS-K-VKISGGGRCNVTNGHCADKMILAG------HYPRGH 119 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~-k-~~~sG~g~~n~~~~~~~~~~~~~~------~~~~~~ 119 (481)
+.++||||||||++|++||+.|++ .|.+|+||||..+.+ . ..+.|+..+.+.+....+...+.. .+. .+
T Consensus 16 ~~~~DVvVVG~G~AGl~AAl~aa~--~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l-~d 92 (621)
T 2h88_A 16 DHEFDAVVVGAGGAGLRAAFGLSE--AGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWL-GD 92 (621)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTC-SC
T ss_pred cccCCEEEECccHHHHHHHHHHHH--CCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCC-CC
Confidence 356899999999999999999999 799999999875432 2 233444344333321111111111 111 12
Q ss_pred hhchhhHHhcCChHHHHHHHHhcCCcceeecCCeeee----------------------cCCChHHHHHHHHHHHHhCCC
Q 011610 120 KEFRGSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFP----------------------VSDSSSSVIDCLLTEAKHRGV 177 (481)
Q Consensus 120 ~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p----------------------~~~~a~~~~~~l~~~~~~~Gv 177 (481)
..++..+ ... ..+.++|+.++|+++.....+.+++ .......++..|.+.+.+.||
T Consensus 93 ~~~v~~l-~~~-s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv 170 (621)
T 2h88_A 93 QDAIHYM-TEQ-APAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDT 170 (621)
T ss_dssp HHHHHHH-HHH-HHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHH-HHH-HHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 2332222 111 3467789999999876544443321 011245788999999999999
Q ss_pred EEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCC--------------ChhHHHHHHHcCCCcccCCC
Q 011610 178 VLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS--------------SQQGHRLAAQLGHSIVDPVP 243 (481)
Q Consensus 178 ~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------~g~g~~la~~~G~~i~~~~p 243 (481)
+|++++.|++|..++ +...+|.+.+..++....+.|+.||+|||+ +|+|+.++.++|+.+..+..
T Consensus 171 ~i~~~~~v~~Li~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y~~~t~~~~~tGdG~~mA~raGa~l~~me~ 249 (621)
T 2h88_A 171 SYFVEYFALDLLMEN-GECRGVIALCIEDGTIHRFRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEF 249 (621)
T ss_dssp EEEETEEEEEEEEET-TEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEECTTC
T ss_pred EEEEceEEEEEEEEC-CEEEEEEEEEcCCCcEEEEEcCeEEECCCccccccCCcCCCCCCChHHHHHHHHcCCCcccCcc
Confidence 999999999998765 445566664312222347999999999995 46789999999999876543
Q ss_pred cee-EeeeCccccccccCceeccEEEEEEecCccCCCCccceecCeEEEeccccchhhcc------cchhhHHHhHccCc
Q 011610 244 SLF-TFKIADSQLTELSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILR------LSAWGARYLFSSCY 316 (481)
Q Consensus 244 ~l~-~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~Ge~lft~~glsG~~il~------lS~~~~~~~~~~~~ 316 (481)
..+ |.......+---.+++-.. .+-+ + ..|+.+..+|. |...+ +|+.+..++.+...
T Consensus 250 ~q~hPt~~~~~~~l~se~~rg~g-~ilv--n----------~~G~RF~~~y~---p~~~ela~rdvv~rai~~e~~~g~g 313 (621)
T 2h88_A 250 VQFHPTGIYGAGCLITEGCRGEG-GILI--N----------SQGERFMERYA---PVAKDLASRDVVSRSMTIEIREGRG 313 (621)
T ss_dssp EEEEEEEETTTCCBCCTHHHHTT-CEEE--C----------TTCCCTHHHHS---TTTGGGSCHHHHHHHHHHHHHTTCC
T ss_pred eeeecccccCCcceecccccCCc-cEEE--C----------CCCCCcccccC---cccccccchHHHHHHHHHHHHhcCC
Confidence 222 1111110000000011011 1111 1 12333222221 11111 22222233332211
Q ss_pred ----eeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhhCCCccchhHHHHHHHHHh-cCCCCCCccccCCHHHHHHHH
Q 011610 317 ----KGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGR-EGLSGDTLWASVSNNSLISIA 391 (481)
Q Consensus 317 ----~~~~~~d~~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~ 391 (481)
...+.+|+ ..+..+.+.+.+ | . +..+++. .|+|+.
T Consensus 314 ~~~~~~~v~ld~-~~l~~~~l~~~~----------------------~-~-i~~~~~~~~G~D~~--------------- 353 (621)
T 2h88_A 314 CGPEKDHVYLQL-HHLPPQQLATRL----------------------P-G-ISETAMIFAGVDVT--------------- 353 (621)
T ss_dssp BTTTTCBEEEEC-TTSCHHHHHHHC----------------------H-H-HHHHHHHHHCCCTT---------------
T ss_pred cccCCCeEEEEc-ccCCHHHHHHHH----------------------H-H-HHHHHHHhcCCCCC---------------
Confidence 11244453 233444332211 1 0 1122222 377763
Q ss_pred HHhccCeEEEcccCCCceeEEecCCCCCCCCCcccc-----cccCCCCeEEEEEEe--eccc--CcchHHHHHHHHHHHH
Q 011610 392 RLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTM-----ESKIHPRLFFAGEVL--NVDG--VTGGFNFQNAWSGGYI 462 (481)
Q Consensus 392 ~~l~~~~~~v~~~~~~~~a~vt~GGv~~~ei~~~t~-----esk~~~gLy~~GE~l--dv~g--~~GGynl~~A~~sG~~ 462 (481)
+-|++|... +..|+|||.+++-- +.+ +.+.|||||+|||+. .++| +.||.+|..|+++|++
T Consensus 354 ----~~pi~v~p~-----~h~tmGGi~~d~~~-~Vl~~~~~~~t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~ 423 (621)
T 2h88_A 354 ----KEPIPVLPT-----VHYNMGGIPTNYKG-QVITHVNGEDKVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRA 423 (621)
T ss_dssp ----TSCEEEEEE-----EEEESCBEEBCTTS-EEEEEETTEEEEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHH
T ss_pred ----CCCEEEEee-----cccccCcEeECCCC-eEeecccCCCcccCceEEccccccccccCCCCCchHhHHHHHHHHHH
Confidence 223555433 67899999987532 221 247899999999975 6887 5799999999999999
Q ss_pred HHHHHhHHhh
Q 011610 463 AGTSIGKLSN 472 (481)
Q Consensus 463 AG~~aa~~~~ 472 (481)
||++||+++.
T Consensus 424 Ag~~aa~~~~ 433 (621)
T 2h88_A 424 CALTIAETCK 433 (621)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHhhh
Confidence 9999998764
No 9
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.92 E-value=9.5e-24 Score=228.49 Aligned_cols=348 Identities=17% Similarity=0.137 Sum_probs=200.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCC--CceEEecCCceeeccCCC--cc-hhHHhh------ccCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPL--SKVKISGGGRCNVTNGHC--AD-KMILAG------HYPR 117 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g--~k~~~sG~g~~n~~~~~~--~~-~~~~~~------~~~~ 117 (481)
.++||+|||||++|++||+.|++ .|.+|+||||..+. .+..++|+..+...+... .+ ...+.. .+.
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae--~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~g~~ds~~~~~~dt~~~g~~~- 80 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQ--KGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWG- 80 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHT--TTCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGGTTCCHHHHHHHHHHHTTTC-
T ss_pred ccccEEEECchHHHHHHHHHHHH--CCCcEEEEeccCCCCCcccccCCCeEeccCCcccCCCCCHHHHHHHHHHhcCCC-
Confidence 46899999999999999999999 78999999987553 344555655555444210 11 111111 111
Q ss_pred CChhchhhHHhcCChHHHHHHHHhcCCcceeecCCe---------------------ee---------ec-----CCChH
Q 011610 118 GHKEFRGSFFSLHGPMDTMSWFSDHGVELKTEDDGR---------------------VF---------PV-----SDSSS 162 (481)
Q Consensus 118 ~~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~---------------------~~---------p~-----~~~a~ 162 (481)
.....+..+. .. ..+.++|+.++|+++.....+. ++ |. .....
T Consensus 81 ~d~~~v~~~~-~~-s~~~i~~L~~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~~~~~gg~~~~R~~~~~d~tG~ 158 (660)
T 2bs2_A 81 CDQKVARMFV-NT-APKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGTKKWRTCYTADATGH 158 (660)
T ss_dssp SCHHHHHHHH-HH-HHHHHHHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCCBCCTTCSSCCEECSTTCHHH
T ss_pred CCHHHHHHHH-HH-HHHHHHHHHHcCCCceecCCCcccccccccccccccchhhhhhhccccccccccceeEeeCCCCHH
Confidence 1222222222 21 3467788999998876432222 11 11 11245
Q ss_pred HHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCC--------------ChhHH
Q 011610 163 SVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS--------------SQQGH 228 (481)
Q Consensus 163 ~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------~g~g~ 228 (481)
.++..|.+.+.+.|++|++++.|++|..++ +...+|.+.+..++....+.|+.||+|||+ +|+|+
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y~~tt~~~~~tGdG~ 237 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQD-GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGT 237 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEEETTTCCEEEEECSEEEECCCCCGGGSSSBSSCTTCSCHHH
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecC-CEEEEEEEEECCCCcEEEEEcCEEEEccCcchhhcCCCCCCCCcccHHH
Confidence 788999999999999999999999998765 344566654212222346999999999996 36789
Q ss_pred HHHHHcCC-CcccCCCceeEeeeCcccc-cccc--CceeccEEEEEEecCccCCCCccceecCeEEEecccc----chhh
Q 011610 229 RLAAQLGH-SIVDPVPSLFTFKIADSQL-TELS--GVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLS----GPVI 300 (481)
Q Consensus 229 ~la~~~G~-~i~~~~p~l~~~~~~~~~~-~~l~--G~~~~~~~~~~~~~~~~~~~~~~~~~Ge~lft~~gls----G~~i 300 (481)
.++.++|+ .+..+. .+++....... ..+- +++-.. .+-+ + ..|+.+..+|.-. .|.
T Consensus 238 ~mA~~aGa~~l~~me--~~q~hPt~~~~~~~l~se~~rg~g-~ilv--n----------~~G~RF~~~y~p~~~ela~r- 301 (660)
T 2bs2_A 238 AIALETGIAQLGNME--AVQFHPTPLFPSGILLTEGCRGDG-GILR--D----------VDGHRFMPDYEPEKKELASR- 301 (660)
T ss_dssp HHHHTTSSSCEECTT--CEEEESCBBTTTCCBCCTHHHHHT-CEEE--C----------TTCCBCHHHHCTTTGGGSCH-
T ss_pred HHHHHcCCChhcCch--hheecccccCCCcceecccccCCC-cEEE--C----------CCCCCcCcccCcccccccch-
Confidence 99999999 887644 23332111000 0000 000000 0111 1 1233322222100 010
Q ss_pred cccchhhHHHhHccCc-----eeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhhCCCccchhHHHHHHHHHh-cCCC
Q 011610 301 LRLSAWGARYLFSSCY-----KGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGR-EGLS 374 (481)
Q Consensus 301 l~lS~~~~~~~~~~~~-----~~~~~~d~~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~ 374 (481)
--+|+.+..++.+... ...+.+|+- .+..+.+. . .+| .+..+++. .|+|
T Consensus 302 dvv~rai~~~~~~g~g~~~~~~~~v~ld~~-~~~~~~~~----~------------------~~p--~i~e~~~~~~GiD 356 (660)
T 2bs2_A 302 DVVSRRMIEHIRKGKGVQSPYGQHLWLDIS-ILGRKHIE----T------------------NLR--DVQEICEYFAGID 356 (660)
T ss_dssp HHHHHHHHHHHHTTTSBCCTTCCBEEEECG-GGCHHHHH----H------------------HSH--HHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHhcCCccCCCCCEEEEECC-CCCHHHHH----H------------------HhH--HHHHHHHHhcCCC
Confidence 0012222222222110 123444442 11222111 0 111 13445555 6888
Q ss_pred CCCccccCCHHHHHHHHHHhccCeEEEcccCCCceeEEecCCCCCCCCCcccccccCCCCeEEEEEEe--eccc--Ccch
Q 011610 375 GDTLWASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVL--NVDG--VTGG 450 (481)
Q Consensus 375 ~~~~~~~l~~~~~~~l~~~l~~~~~~v~~~~~~~~a~vt~GGv~~~ei~~~t~esk~~~gLy~~GE~l--dv~g--~~GG 450 (481)
+.+ .|++|.. .+..|+|||.+++- .+. .|||||+|||+. .++| +.||
T Consensus 357 ~~~-------------------~~ipv~p-----~~hyt~GGi~vd~~----~~v-~IpGLYAaGE~a~~g~hGanrlgg 407 (660)
T 2bs2_A 357 PAE-------------------KWAPVLP-----MQHYSMGGIRTDYR----GEA-KLKGLFSAGEAACWDMHGFNRLGG 407 (660)
T ss_dssp TTT-------------------SCEEECC-----EEEEECCEEECCTT----SBC-SSBTEEECGGGEECCSSTTCCCTT
T ss_pred Ccc-------------------cceEeee-----eeeeccceEEECCC----Cce-ecCCEEeccccccccccCCCCCch
Confidence 753 3455543 37789999998743 233 899999999975 5777 5799
Q ss_pred HHHHHHHHHHHHHHHHHhHHhh
Q 011610 451 FNFQNAWSGGYIAGTSIGKLSN 472 (481)
Q Consensus 451 ynl~~A~~sG~~AG~~aa~~~~ 472 (481)
.+|..|+++|++||++|++++.
T Consensus 408 nsL~~~~vfGr~Ag~~aa~~~~ 429 (660)
T 2bs2_A 408 NSVSEAVVAGMIVGEYFAEHCA 429 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999998874
No 10
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.92 E-value=3.4e-24 Score=229.51 Aligned_cols=376 Identities=20% Similarity=0.231 Sum_probs=203.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCC-------cchhHHhhc-----c
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHC-------ADKMILAGH-----Y 115 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~-------~~~~~~~~~-----~ 115 (481)
..+||+|||+|++|+++|+.|++ .|.+|+|+|+. .++.....++++.+ ..+... .+...+... .
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~--~g~~v~~~e~~~~~~~~~~~a~gg~~-~~~~~~~~~~g~~ds~~~~~~~~~~~g~ 201 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARD--AGAKVILLEKEPIPGGNTKLAAGGMN-AAETKPQAKLGIEDKKQIMIDDTMKGGR 201 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHS--SSCCEEEECSSSSSCTTGGGCCSCEE-CCSSSTTGGGTCCCCTHHHHHHHHHHTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHH--CCCcEEEEecCCCCCcchhhhCCeeE-ccCCHHHHHhCCCCCHHHHHHHHHHhcC
Confidence 36799999999999999999999 78999999965 55655555555543 222111 011111111 0
Q ss_pred CCCChhchhhHHhcCChHHHHHHHHhcCCcceee--cCCeeeecC-------CChHHHHHHHHHHHHhCCCEEEcCceEE
Q 011610 116 PRGHKEFRGSFFSLHGPMDTMSWFSDHGVELKTE--DDGRVFPVS-------DSSSSVIDCLLTEAKHRGVVLQTGKVVT 186 (481)
Q Consensus 116 ~~~~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~--~~g~~~p~~-------~~a~~~~~~l~~~~~~~Gv~i~~~~~V~ 186 (481)
......++..+. . ...+.++|+.+.|+++... ..+..+|.. .....+...|.+.+++.||+|+++++|+
T Consensus 202 ~~~~~~~v~~~~-~-~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~ 279 (572)
T 1d4d_A 202 NINDPELVKVLA-N-NSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVV 279 (572)
T ss_dssp TCSCHHHHHHHH-H-THHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEE
T ss_pred CCCCHHHHHHHH-H-ccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEE
Confidence 112223332221 1 3456788999989877532 133333321 1256788999999999999999999999
Q ss_pred EEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCC--------------------------ChhHHHHHHHcCCCccc
Q 011610 187 TASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS--------------------------SQQGHRLAAQLGHSIVD 240 (481)
Q Consensus 187 ~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------------------~g~g~~la~~~G~~i~~ 240 (481)
+|..++++..++|.+.+ .++....+.||.||+|||+ +|+++.++.++|+.+..
T Consensus 280 ~l~~~~~g~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~p~~~~~~~~~~~~~tGdgi~~a~~~Ga~~~~ 358 (572)
T 1d4d_A 280 RILEDASGKVTGVLVKG-EYTGYYVIKADAVVIAAGGFAKNNERVSKYDPKLKGFKATNHPGATGDGLDVALQAGAATRD 358 (572)
T ss_dssp EEEEC--CCEEEEEEEE-TTTEEEEEECSEEEECCCCCTTCHHHHHHHCGGGTTCCBSSCTTCSSHHHHHHHHTTBCEEC
T ss_pred EEEECCCCeEEEEEEEe-CCCcEEEEEcCEEEEeCCCCccCHHHHHHhCccccCCCccCCCCCccHHHHHHHHcCCeEeC
Confidence 99865312445666652 1222347999999999995 24678888899988876
Q ss_pred CCCceeEeeeCccccccccC--ceeccEEEEEEecCccCCCCccceecCeEEEeccccchhhcccchhhHHHhHccCcee
Q 011610 241 PVPSLFTFKIADSQLTELSG--VSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLFSSCYKG 318 (481)
Q Consensus 241 ~~p~l~~~~~~~~~~~~l~G--~~~~~~~~~~~~~~~~~~~~~~~~~Ge~lft~~glsG~~il~lS~~~~~~~~~~~~~~ 318 (481)
+....+.-...... ..+.. ++-.. .+.+..+| +++.. |+ ..+...+.+++.. .+...
T Consensus 359 ~~~~q~~p~~~~~~-~~l~~~~~~~~g-~i~vn~~G----~RF~~---E~--~~~~~~~~ai~~~----------~~~~~ 417 (572)
T 1d4d_A 359 LQYIQAHPTYSPAG-GVMITEAVRGNG-AIVVNREG----NRFMN---EI--TTRDKASAAILQQ----------KGESA 417 (572)
T ss_dssp TTCEEEEEEEETTT-TEECCHHHHHTT-CEEECTTS----CCCSC---TT--SCHHHHHHHHHTS----------GGGCE
T ss_pred CCceeEecccCCCc-cccchhhhccCc-eEEECCCC----CCccC---CC--CCHhHHHHHHHhC----------cCCeE
Confidence 65433221111100 00100 00011 11122222 22221 22 1111112222211 11123
Q ss_pred EEEEec--CCCCCHHHHHHHHHHHHHhchhhhhhhhCCCccchhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHH----
Q 011610 319 MLTVDF--VPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIAR---- 392 (481)
Q Consensus 319 ~~~~d~--~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~---- 392 (481)
.+.+|- .... ..+...+ .. .. ......+++|++..|++++...+.+ +.++..+.
T Consensus 418 ~~i~d~~~~~~~--~~~~~~~----~~-------~~-----~~~~~ti~ela~~~gi~~~~l~~tv--~~yn~~~~~g~D 477 (572)
T 1d4d_A 418 YLVFDDSIRKSL--KAIEGYV----HL-------NI-----VKEGKTIEELAKQIDVPAAELAKTV--TAYNGFVKSGKD 477 (572)
T ss_dssp EEEECHHHHTTC--THHHHHH----HT-------TC-----CEEESSHHHHHHHHTCCHHHHHHHH--HHHHHHC-CCCC
T ss_pred EEEEChHHhhhc--cchHHHh----hC-------Cc-----EEEeCCHHHHHHHcCCCHHHHHHHH--HHHHHHHhcCCC
Confidence 333331 0000 0010000 00 00 1112234555555666654332222 22333322
Q ss_pred ----------HhccCeEEEcccCCCceeEEecCCCCCCCCCc-ccccc-cCCCCeEEEEEEe-eccc--CcchHHHHHHH
Q 011610 393 ----------LLKHCTLEVAGKGQFKDEFVTAGGVPLSEISL-NTMES-KIHPRLFFAGEVL-NVDG--VTGGFNFQNAW 457 (481)
Q Consensus 393 ----------~l~~~~~~v~~~~~~~~a~vt~GGv~~~ei~~-~t~es-k~~~gLy~~GE~l-dv~g--~~GGynl~~A~ 457 (481)
.+.+-||+.... ...+..|+|||.+++--. .+-+. ++|||||+|||+. .++| +.||.+|.+|+
T Consensus 478 ~~fg~~~~~~~i~~~Pfya~~v--~p~~~~t~GGl~id~~~~Vl~~~g~~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~ 555 (572)
T 1d4d_A 478 AQFERPDLPRELVVAPFYALEI--APAVHHTMGGLVIDTKAEVKSEKTAKPITGLYAAGEVTGGVHGANRLGGNAISDIV 555 (572)
T ss_dssp TTTCCSCCCCCCCSSSEEEEEE--EEEEEEECCEEEBCTTCEEEBSSSSSEEEEEEECSTTEESTTTTSCCTTHHHHHHH
T ss_pred cccCCCCCCCcCCCCCEEEEEE--EcccceeCCCeEECCCCeEEcCCCCcccCCeeECeecccCCCCCCCCchHhHHHHH
Confidence 123345444322 234678999999885321 11234 7899999999976 4666 67999999999
Q ss_pred HHHHHHHHHHhHHhhH
Q 011610 458 SGGYIAGTSIGKLSND 473 (481)
Q Consensus 458 ~sG~~AG~~aa~~~~~ 473 (481)
++||+||++||+++++
T Consensus 556 vfGr~Ag~~aa~~~~~ 571 (572)
T 1d4d_A 556 TYGRIAGASAAKFAKD 571 (572)
T ss_dssp HHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHhhh
Confidence 9999999999987753
No 11
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.91 E-value=2.7e-23 Score=220.88 Aligned_cols=351 Identities=16% Similarity=0.133 Sum_probs=187.1
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCC-CceEEecCCceeeccCCCcc-hhHHhhcc-----CCCCh
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPL-SKVKISGGGRCNVTNGHCAD-KMILAGHY-----PRGHK 120 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g-~k~~~sG~g~~n~~~~~~~~-~~~~~~~~-----~~~~~ 120 (481)
+.++||+|||||++|++||+.|++ |.+|+||||.... .....+++|.+...+. .+ ...+...+ ...+.
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~---G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~--~ds~~~~~~d~l~~g~g~~d~ 80 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD---QHQVIVLSKGPVTEGSTFYAQGGIAAVFDE--TDSIDSHVEDTLIAGAGICDR 80 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT---TSCEEEECSSCTTC-------------CCS--HHHHHHHHHHHHHHTTTCCCH
T ss_pred CCCCCEEEECccHHHHHHHHHHhc---CCcEEEEECCCCCCCChhhcCCCEEEecCC--CCCHHHHHHHHHHhhcccCCH
Confidence 346899999999999999999997 6899999987543 3333444444322211 11 11111110 11122
Q ss_pred hchhhHHhcCChHHHHHHHHhcCCcceeec----CCee-------------eec-CCChHHHHHHHHHHHHh-CCCEEEc
Q 011610 121 EFRGSFFSLHGPMDTMSWFSDHGVELKTED----DGRV-------------FPV-SDSSSSVIDCLLTEAKH-RGVVLQT 181 (481)
Q Consensus 121 ~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~~----~g~~-------------~p~-~~~a~~~~~~l~~~~~~-~Gv~i~~ 181 (481)
..+..+. . ...+.++|+.++|+++.... .+.+ ++. ......+...|.+.+++ .||+|++
T Consensus 81 ~~v~~~~-~-~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~~ 158 (540)
T 1chu_A 81 HAVEFVA-S-NARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLE 158 (540)
T ss_dssp HHHHHHH-H-HHHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTEEEEC
T ss_pred HHHHHHH-H-hHHHHHHHHHHcCCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEEe
Confidence 2222211 1 12467788999998875433 2211 111 11234567778888888 7999999
Q ss_pred CceEEEEEe-cCCC------CeEEEEEeecccCceEEEEcCeEEEccCC--------------ChhHHHHHHHcCCCccc
Q 011610 182 GKVVTTASS-DNAG------RKFLLKVEKRTMNLVECIEADYLLIASGS--------------SQQGHRLAAQLGHSIVD 240 (481)
Q Consensus 182 ~~~V~~i~~-~~~~------~~~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------~g~g~~la~~~G~~i~~ 240 (481)
++.|++|.. ++ + ..++|.+.+..++....+.|+.||+|||+ +|+|+.++.++|+.+..
T Consensus 159 ~~~v~~L~~~~~-g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~tGdG~~ma~~aGa~l~~ 237 (540)
T 1chu_A 159 RTNAVDLIVSDK-IGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVAN 237 (540)
T ss_dssp SEEEEEEEEGGG-TTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGGSSSBSCGGGCSCHHHHHHHHTTCCEEC
T ss_pred CcEEEEEEEcCC-CCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcccccCCCcCCCCCchHHHHHHHHcCCCCcC
Confidence 999999997 43 3 34567665311222347999999999995 46789999999999887
Q ss_pred CCCce-eEeeeCccc-ccccc--CceeccEEEEEEecCccCCCCccceecCeEEEeccccchhhcccchhhHHHhHccCc
Q 011610 241 PVPSL-FTFKIADSQ-LTELS--GVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLFSSCY 316 (481)
Q Consensus 241 ~~p~l-~~~~~~~~~-~~~l~--G~~~~~~~~~~~~~~~~~~~~~~~~~Ge~lft~~glsG~~il~lS~~~~~~~~~~~~ 316 (481)
+.... .|..+..+. ...|- .++-.. .+-+..+| +++..+. ..++-..|- -.+++.+..+..+.+
T Consensus 238 ~e~~q~hpt~~~~~~~~~~l~~e~~rg~g-~~lvn~~G----~RF~~~~-----~~~~el~~r-d~v~~ai~~~~~~~~- 305 (540)
T 1chu_A 238 LEFNQFHPTALYHPQARNFLLTEALRGEG-AYLKRPDG----TRFMPDF-----DERGELAPR-DIVARAIDHEMKRLG- 305 (540)
T ss_dssp TTCEEEEEEEECSTTCTTCBCCHHHHHTT-CEEECTTS----CBCGGGT-----CTTGGGSCH-HHHHHHHHHHHHHHT-
T ss_pred hHHHhhcCeeecCCCCCcceeehhhcCCc-eEEECCCC----CCCcccC-----CcccccCcH-HHHHHHHHHHHHhcC-
Confidence 65432 222222110 00010 000001 11121111 2222110 011211221 112333333332222
Q ss_pred eeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhhCCCccchhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhcc
Q 011610 317 KGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKH 396 (481)
Q Consensus 317 ~~~~~~d~~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~l~~ 396 (481)
...+.+|+-+ +..+.+ .. .+| .+..+++..|+|+.+
T Consensus 306 ~~~v~ld~~~-~~~~~~----~~------------------~~~--~i~~~~~~~Gid~~~------------------- 341 (540)
T 1chu_A 306 ADCMFLDISH-KPADFI----RQ------------------HFP--MIYEKLLGLGIDLTQ------------------- 341 (540)
T ss_dssp CSCEEEECCS-SCSHHH----HH------------------HCH--HHHHHHHTTTCCTTT-------------------
T ss_pred CceEEEeccc-CCHHHH----HH------------------hhh--hHHHHHHHhCcCCCC-------------------
Confidence 1234455432 122211 10 111 245667778998763
Q ss_pred CeEEEcccCCCceeEEecCCCCCCCCCcccccccCCCCeEEEEEEe--eccc--CcchHHHHHHHHHHHHHHHHHhHHhh
Q 011610 397 CTLEVAGKGQFKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVL--NVDG--VTGGFNFQNAWSGGYIAGTSIGKLSN 472 (481)
Q Consensus 397 ~~~~v~~~~~~~~a~vt~GGv~~~ei~~~t~esk~~~gLy~~GE~l--dv~g--~~GGynl~~A~~sG~~AG~~aa~~~~ 472 (481)
-|++|.. .+..|+|||.+++-. + +.|||||+|||+. .++| +.||.+|.+|+++|++||++|++++.
T Consensus 342 ~~i~v~p-----~~h~t~GGi~vd~~~----~-t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~~ 411 (540)
T 1chu_A 342 EPVPIVP-----AAHYTCGGVMVDDHG----R-TDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMP 411 (540)
T ss_dssp SCEEEEE-----EEEEESCEEECCTTC----B-CSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCeEeeh-----HHheecCcEEECCCC----C-CccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhcc
Confidence 1344543 377899999988543 2 6899999999987 5766 67999999999999999999987753
No 12
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.89 E-value=1.3e-21 Score=210.31 Aligned_cols=352 Identities=18% Similarity=0.155 Sum_probs=191.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCC--CcEEEEeCCCCC-C-ceEEecCCceeeccCCCcchhHHh-h-----ccCCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPK--LNVVIIEKGKPL-S-KVKISGGGRCNVTNGHCADKMILA-G-----HYPRG 118 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g--~~V~llE~~~~g-~-k~~~sG~g~~n~~~~~~~~~~~~~-~-----~~~~~ 118 (481)
.++||+|||||++|++||+.|++ .| .+|+|||+.... . +..+.|+..+.+.+.. ...... + .+. .
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~--~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~d--s~~~~~~d~~~~g~~~-~ 78 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQ--ANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHD--SFEYHFHDTVAGGDWL-C 78 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH--HCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTC--CHHHHHHHHHHHTTTC-S
T ss_pred ccCCEEEECCCHHHHHHHHHHHh--cCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCC--CHHHHHHHHHHhcCCC-C
Confidence 35899999999999999999999 57 999999976433 2 2223333222222211 111111 0 111 1
Q ss_pred ChhchhhHHhcCChHHHHHHHHhcCCcceeecCCeeeecC--------------CChHHHHHHHHHHHHhCC-CEEEcCc
Q 011610 119 HKEFRGSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVS--------------DSSSSVIDCLLTEAKHRG-VVLQTGK 183 (481)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~--------------~~a~~~~~~l~~~~~~~G-v~i~~~~ 183 (481)
....+..+.. ...+.++|+..+|+++.....+.+++.. .....+...|.+.+.+.| ++|++++
T Consensus 79 d~~~v~~~~~--~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~ 156 (602)
T 1kf6_A 79 EQDVVDYFVH--HCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEH 156 (602)
T ss_dssp CHHHHHHHHH--HHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETE
T ss_pred CHHHHHHHHH--HHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCC
Confidence 1222222111 1235678888999987655444332211 114578899999999888 9999999
Q ss_pred eEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCC--------------ChhHHHHHHHcCCCcccCCCceeEee
Q 011610 184 VVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS--------------SQQGHRLAAQLGHSIVDPVPSLFTFK 249 (481)
Q Consensus 184 ~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------~g~g~~la~~~G~~i~~~~p~l~~~~ 249 (481)
.|++|..++ +...+|.+.+..++....+.|+.||+|||+ +|+++.++.+.|..+..+. .+++.
T Consensus 157 ~v~~l~~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~~~~~~~tGdgi~~a~~aGa~~~~~e--~~qfh 233 (602)
T 1kf6_A 157 FVLDILVDD-GHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDME--FVQYH 233 (602)
T ss_dssp EEEEEEEET-TEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSBSSCTTCSCHHHHHHHTTTCCEESTT--CEEEE
T ss_pred EEEEEEEeC-CEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCcCCCCCcccHHHHHHHHcCCCccChh--Hhhcc
Confidence 999998765 344456543211222247999999999995 4678999999999887653 33332
Q ss_pred eCccccc-cc--cCceeccEEEEEEecCccCCCCccceecCeEEEeccccchhh--ccc------chhhHHHhHccCc--
Q 011610 250 IADSQLT-EL--SGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVI--LRL------SAWGARYLFSSCY-- 316 (481)
Q Consensus 250 ~~~~~~~-~l--~G~~~~~~~~~~~~~~~~~~~~~~~~~Ge~lft~~glsG~~i--l~l------S~~~~~~~~~~~~-- 316 (481)
....... .+ .+++-.. .+-+..+| +++..+....- ..-...|.. +++ ++.+..++.+...
T Consensus 234 Pt~~~~~~~l~~e~~rg~g-~~lvn~~G----~RF~~~y~~~~--~~~~~~p~~~~~el~~rd~v~~ai~~~~~~g~g~~ 306 (602)
T 1kf6_A 234 PTGLPGSGILMTEGCRGEG-GILVNKNG----YRYLQDYGMGP--ETPLGEPKNKYMELGPRDKVSQAFWHEWRKGNTIS 306 (602)
T ss_dssp EEECTTTCCBCCTHHHHTT-CEEECTTC----CCGGGGTTTCS--CCCSSCCCTTSGGGSCHHHHHHHHHHHHHHTCSBC
T ss_pred ccccCCCcceechhhcCCc-eEEECCCC----CCccccccccc--cccccCCcccccccccHHHHHHHHHHHHHhcCCcc
Confidence 1110000 00 0000011 11121111 22222110000 000000110 111 2222222322211
Q ss_pred ---eeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhhCCCccchhHHHHHHHHHh-cCCCCCCccccCCHHHHHHHHH
Q 011610 317 ---KGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGR-EGLSGDTLWASVSNNSLISIAR 392 (481)
Q Consensus 317 ---~~~~~~d~~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~ 392 (481)
...+.+|+- .+..+.+.+. +| . +..+++. .|+|+.+
T Consensus 307 ~~~~~~v~ld~~-~~~~~~l~~~----------------------~~-~-~~~~~~~~~G~D~~~--------------- 346 (602)
T 1kf6_A 307 TPRGDVVYLDLR-HLGEKKLHER----------------------LP-F-ICELAKAYVGVDPVK--------------- 346 (602)
T ss_dssp CTTCCBEEEECG-GGCHHHHHHH----------------------CH-H-HHHHHHHHHCCCTTT---------------
T ss_pred CCCCcEEEeecc-cCCHHHHHHH----------------------HH-H-HHHHHHHhcCCCCCc---------------
Confidence 112444431 1222222111 11 0 1233333 4777642
Q ss_pred HhccCeEEEcccCCCceeEEecCCCCCCCCCcccccccCCCCeEEEEEEe--eccc--CcchHHHHHHHHHHHHHHHHHh
Q 011610 393 LLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVL--NVDG--VTGGFNFQNAWSGGYIAGTSIG 468 (481)
Q Consensus 393 ~l~~~~~~v~~~~~~~~a~vt~GGv~~~ei~~~t~esk~~~gLy~~GE~l--dv~g--~~GGynl~~A~~sG~~AG~~aa 468 (481)
-|++|.. .+..|+|||.+++- ++. .|||||+|||+. .++| +.||.+|..|+++|++||++|+
T Consensus 347 ----~pi~v~p-----~~h~t~GGi~vd~~----~~~-~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa 412 (602)
T 1kf6_A 347 ----EPIPVRP-----TAHYTMGGIETDQN----CET-RIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQAT 412 (602)
T ss_dssp ----SCEEEEE-----EEEEECCEEECCTT----SBC-SSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred ----CceEEeh-----hheeeCCeEEECCC----Ccc-ccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 2344433 36789999998743 233 899999999986 5776 5689999999999999999999
Q ss_pred HHh
Q 011610 469 KLS 471 (481)
Q Consensus 469 ~~~ 471 (481)
+++
T Consensus 413 ~~~ 415 (602)
T 1kf6_A 413 ERA 415 (602)
T ss_dssp HHH
T ss_pred Hhh
Confidence 876
No 13
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.86 E-value=1.7e-22 Score=215.38 Aligned_cols=81 Identities=22% Similarity=0.324 Sum_probs=69.0
Q ss_pred ccCCHHHHHHHHHHhccCeEEEcccCCCceeEEecCCCCC--CCCCc----ccccccCCCCeEEEEEEeecccCcchHHH
Q 011610 380 ASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPL--SEISL----NTMESKIHPRLFFAGEVLNVDGVTGGFNF 453 (481)
Q Consensus 380 ~~l~~~~~~~l~~~l~~~~~~v~~~~~~~~a~vt~GGv~~--~ei~~----~t~esk~~~gLy~~GE~ldv~g~~GGynl 453 (481)
.+|+.++..+++..+ .++++|++++||+.+ ++||| +|||+|.+||||||||++|++ |||
T Consensus 330 t~l~~~~q~~~~~~i----------~gle~a~~~~~G~~~~y~~i~p~~l~~tle~k~~~gLf~AGqi~g~~----Gy~- 394 (641)
T 3cp8_A 330 TSLPEDIQIAGLRSI----------PGLEEAKMIRPGYAIEYDFFHPWQIRSTMETRPVENLFFAGQINGTS----GYE- 394 (641)
T ss_dssp CCSCHHHHHHHHTTS----------TTCTTCCEEECCEEEEEEEECGGGBCTTSBBSSSBTEEECSGGGTBC----CHH-
T ss_pred ccccHHHHHHHHhcC----------cchhhceEecceeeecceEECHHHcCCcccccCcCCEEEEEeecCCc----cHH-
Confidence 345566666666544 789999999999998 89999 899999999999999888875 799
Q ss_pred HHHHHHHHHHHHHHhHHhhHhhh
Q 011610 454 QNAWSGGYIAGTSIGKLSNDATL 476 (481)
Q Consensus 454 ~~A~~sG~~AG~~aa~~~~~~~~ 476 (481)
|||++|++||.+|+.+++.+++
T Consensus 395 -eA~a~G~~AG~naa~~~~~~~~ 416 (641)
T 3cp8_A 395 -EAAAQGLMAGINAVRKILGKEL 416 (641)
T ss_dssp -HHHHHHHHHHHHHHHHHHTCCC
T ss_pred -HHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999998877654
No 14
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.86 E-value=3.9e-21 Score=207.98 Aligned_cols=190 Identities=16% Similarity=0.138 Sum_probs=121.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhcc----CCCCcEEEEeCCCCCCceEEecC-CceeeccCCCcchhHHh-----hccCCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTV----APKLNVVIIEKGKPLSKVKISGG-GRCNVTNGHCADKMILA-----GHYPRG 118 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~----~~g~~V~llE~~~~g~k~~~sG~-g~~n~~~~~~~~~~~~~-----~~~~~~ 118 (481)
.++||||||||+|||+||+.|++. ++|.+|+||||..+++....+.+ ...|.... ..++..+. ......
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s~AqG~~gi~a~l~-~ds~e~~~~~~~~~~~gl~ 99 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGAVAQGLSAINTYLG-DNNADDYVRMVRTDLMGLV 99 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCSTTTTCEEEECCCCT-TSCHHHHHHHHHHHTTTCC
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcccccCcchheeecC-CCCHHHHHHHHHHhcCCCc
Confidence 468999999999999999999982 12899999998766542111212 01211111 11111111 111112
Q ss_pred ChhchhhHHhcCChHHHHHHHHhcCCcceee-cCCeeee-------------------cC-----CChHHHHHHHHHHHH
Q 011610 119 HKEFRGSFFSLHGPMDTMSWFSDHGVELKTE-DDGRVFP-------------------VS-----DSSSSVIDCLLTEAK 173 (481)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~-~~g~~~p-------------------~~-----~~a~~~~~~l~~~~~ 173 (481)
....+..+ .. ...+.++|+.++|+++... ..+.+++ .. .....+...|.+.++
T Consensus 100 d~~~v~~l-~~-~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~L~~~a~ 177 (662)
T 3gyx_A 100 REDLIYDL-GR-HVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIVAEAAK 177 (662)
T ss_dssp CHHHHHHH-HH-HHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHHHHHHH
T ss_pred cHHHHHHH-HH-HHHHHHHHHHHcCCCceecCCCCccccchhhhccccccccCccccccceecccCCHHHHHHHHHHHHH
Confidence 22222221 11 1235678889999998765 4454442 00 013467788888888
Q ss_pred hC--CCEEEcCceEEEEEecCCC---CeEEEEEeecccCceEEEEcCeEEEccCC-----------------------Ch
Q 011610 174 HR--GVVLQTGKVVTTASSDNAG---RKFLLKVEKRTMNLVECIEADYLLIASGS-----------------------SQ 225 (481)
Q Consensus 174 ~~--Gv~i~~~~~V~~i~~~~~~---~~~~V~~~~~~~~~~~~i~ad~VIlAtG~-----------------------~g 225 (481)
+. ||+|+.++.|++|..++ + ...+|...+..++....+.|+.||+|||+ +|
T Consensus 178 ~~~~gV~i~~~~~v~dLi~~~-~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~y~~~t~~~~~~~~~~~~~~tG 256 (662)
T 3gyx_A 178 NALGQDRIIERIFIVKLLLDK-NTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNVYRPRSVGEGMGRAWYPVWNAG 256 (662)
T ss_dssp HHHCTTTEECSEEECCCEECS-SSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSSCTTCBS
T ss_pred hcCCCcEEEEceEEEEEEEeC-CccceEEEEEEEEcCCCcEEEEEeCEEEECCCcccccccCcCCccccccccCCCCCcc
Confidence 87 99999999999998876 4 45566654322333467999999999994 34
Q ss_pred hHHHHHHHcCCCcccCC
Q 011610 226 QGHRLAAQLGHSIVDPV 242 (481)
Q Consensus 226 ~g~~la~~~G~~i~~~~ 242 (481)
+|+.+|.++|+.+..+.
T Consensus 257 dG~~mA~~aGA~l~~me 273 (662)
T 3gyx_A 257 STYTMCAQVGAEMTMME 273 (662)
T ss_dssp HHHHHHHTTTCEEECTT
T ss_pred hHHHHHHHhCCcccCCC
Confidence 68999999999988776
No 15
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.86 E-value=2.7e-21 Score=206.21 Aligned_cols=80 Identities=29% Similarity=0.480 Sum_probs=65.7
Q ss_pred ccCCHHHHHHHHHHhccCeEEEcccCCCceeEEecCC-------CCCCCCCcccccccCCCCeEEEEEEeecccCcchHH
Q 011610 380 ASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGG-------VPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFN 452 (481)
Q Consensus 380 ~~l~~~~~~~l~~~l~~~~~~v~~~~~~~~a~vt~GG-------v~~~ei~~~t~esk~~~gLy~~GE~ldv~g~~GGyn 452 (481)
.+|+.+...+++..+ .|++.|.++++| |+..+++ .|||+|.+||||||| ++.|.+ ||+
T Consensus 336 t~lp~~~q~~~~~~i----------pGle~a~i~r~Gy~ieyd~i~p~~L~-~tle~k~~~gLf~AG---qinGtt-GYe 400 (651)
T 3ces_A 336 TSLPFDVQMQIVRSM----------QGMENAKIVRPGYAIEYDFFDPRDLK-PTLESKFIQGLFFAG---QINGTT-GYE 400 (651)
T ss_dssp CCSCHHHHHHHHHTS----------TTCTTCCEEECCEEEEEEEECGGGBC-TTSBBSSSBTEEECS---GGGTCC-CHH
T ss_pred CCCCHHHHHHHHhhC----------CCccceEEEeccceeccCccchhhcC-ccccccCCCCeEEEE---EecCCc-ChH
Confidence 345556666666544 689999999999 7788888 699999999999999 556766 699
Q ss_pred HHHHHHHHHHHHHHHhHHhhHhhh
Q 011610 453 FQNAWSGGYIAGTSIGKLSNDATL 476 (481)
Q Consensus 453 l~~A~~sG~~AG~~aa~~~~~~~~ 476 (481)
|||++|.+||.+||.++..+.+
T Consensus 401 --EAaaqGl~AG~nAa~~~~~~~~ 422 (651)
T 3ces_A 401 --EAAAQGLLAGLNAARLSADKEG 422 (651)
T ss_dssp --HHHHHHHHHHHHHHHHHTTCCC
T ss_pred --HHHHHHHHHHHHHHHHhcCCCC
Confidence 8999999999999998876654
No 16
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.86 E-value=7e-21 Score=206.35 Aligned_cols=200 Identities=15% Similarity=0.146 Sum_probs=127.5
Q ss_pred CCCCeEEEECCchHHHHHHHHHh---ccCCCCcEEEEeCCCCCCceEEecCC-cee--eccCC----CcchhHHhhc---
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAK---TVAPKLNVVIIEKGKPLSKVKISGGG-RCN--VTNGH----CADKMILAGH--- 114 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la---~~~~g~~V~llE~~~~g~k~~~sG~g-~~n--~~~~~----~~~~~~~~~~--- 114 (481)
+.++||+|||||++||+||+.|+ +. .|.+|+||||...++....++++ .++ +.... ..+...+...
T Consensus 20 ~~~~DVvVIG~G~AGl~AAl~aa~~~~~-~G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~ 98 (643)
T 1jnr_A 20 VVETDILIIGGGFSGCGAAYEAAYWAKL-GGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTL 98 (643)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHTT-TTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHH
T ss_pred eccCCEEEECcCHHHHHHHHHHhhhhhh-CCCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHH
Confidence 45689999999999999999999 31 48999999987654321112221 222 10000 0111121111
Q ss_pred --cCCCChhchhhHHhcCChHHHHHHHHhcCCcceeecCCeeeecCC-----ChHHHHHHHHHHHHhC-CC-EEEcCceE
Q 011610 115 --YPRGHKEFRGSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSD-----SSSSVIDCLLTEAKHR-GV-VLQTGKVV 185 (481)
Q Consensus 115 --~~~~~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~-----~a~~~~~~l~~~~~~~-Gv-~i~~~~~V 185 (481)
.......++..+... ..+.++|+.++|+++.....+.++|... ....+...|.+.+++. || +|++++.|
T Consensus 99 ~g~~l~d~~~v~~~~~~--~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v 176 (643)
T 1jnr_A 99 DMMGLAREDLVADYARH--VDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFI 176 (643)
T ss_dssp HTTTCCCHHHHHHHHHH--HHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEE
T ss_pred HhcCcCcHHHHHHHHHH--HHHHHHHHHHcCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEE
Confidence 011122232222211 3467789999999887655566655321 1345677888888887 99 99999999
Q ss_pred EEEEecCCC---CeEEEEEeecccCceEEEEcCeEEEccCC-----------------------ChhHHHHHHHcCCCcc
Q 011610 186 TTASSDNAG---RKFLLKVEKRTMNLVECIEADYLLIASGS-----------------------SQQGHRLAAQLGHSIV 239 (481)
Q Consensus 186 ~~i~~~~~~---~~~~V~~~~~~~~~~~~i~ad~VIlAtG~-----------------------~g~g~~la~~~G~~i~ 239 (481)
++|..++ + ...+|.+.+..++....+.|+.||+|||+ +|+|+.++.++|+.+.
T Consensus 177 ~~L~~~~-~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~y~~~~~~~~~~~~~~~~~~tGdG~~mA~~aGa~l~ 255 (643)
T 1jnr_A 177 FELLKDN-NDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLLFRPRSTGEAAGRTWYAIFDTGSGYYMGLKAGAMLT 255 (643)
T ss_dssp EEEEECT-TCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSSCTTCBSHHHHHHHHHTCCEE
T ss_pred EEEEEcC-CccceeEEEEEEEecCCcEEEEEcCEEEECCCcccccccCcccccccccccCCCCCccHHHHHHHHhCCccC
Confidence 9999875 4 45566653212233347999999999994 2568999999999998
Q ss_pred cCCCceeEeeeC
Q 011610 240 DPVPSLFTFKIA 251 (481)
Q Consensus 240 ~~~p~l~~~~~~ 251 (481)
.+.+.++|..+.
T Consensus 256 ~me~qf~pt~~~ 267 (643)
T 1jnr_A 256 QFEHRFIPFRFK 267 (643)
T ss_dssp STTCCBCCEEET
T ss_pred Cchheeeccccc
Confidence 887766665443
No 17
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.82 E-value=9.3e-20 Score=193.73 Aligned_cols=146 Identities=16% Similarity=0.198 Sum_probs=89.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC--CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhH
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG--KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~--~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (481)
..+||+|||||++|++||+.|++ .|.+|+|||+. .+| +..||...... .. ..+...
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr--~G~kVlLIEk~~~~iG-------~~~Cnps~GGi-a~-----------g~lv~e- 83 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAAR--MGAKTAMFVLNADTIG-------QMSCNPAIGGI-AK-----------GIVVRE- 83 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCGGGTT-------CCCSCSEEECT-TH-----------HHHHHH-
T ss_pred CcCCEEEECCCHHHHHHHHHHHH--CCCCEEEEEecccccC-------CcCcccccccc-ch-----------HHHHHH-
Confidence 46999999999999999999999 79999999975 444 34455432211 00 011111
Q ss_pred HhcCChHHHHHHHHhcCCcceeec--CCe-e-ee-cCCChHHHHHHHHHHHHh-CCCEEEcCceEEEEEecCCCCeEEEE
Q 011610 127 FSLHGPMDTMSWFSDHGVELKTED--DGR-V-FP-VSDSSSSVIDCLLTEAKH-RGVVLQTGKVVTTASSDNAGRKFLLK 200 (481)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~--~g~-~-~p-~~~~a~~~~~~l~~~~~~-~Gv~i~~~~~V~~i~~~~~~~~~~V~ 200 (481)
+..++. .+..+....++.+.... .+. . .+ ...+...+...|.+.+++ .|++| ++++|++|..++ +..++|.
T Consensus 84 ldalgg-~~~~~~d~~gi~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~-g~V~GV~ 160 (637)
T 2zxi_A 84 IDALGG-EMGKAIDQTGIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKN-NQVVGVR 160 (637)
T ss_dssp HHHHTC-SHHHHHHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESS-SBEEEEE
T ss_pred HHHhhh-HHHHHhhhcccceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecC-CEEEEEE
Confidence 011110 01122233333332211 010 0 00 012345678888888888 59999 578999998765 4556788
Q ss_pred EeecccCceEEEEcCeEEEccCCC
Q 011610 201 VEKRTMNLVECIEADYLLIASGSS 224 (481)
Q Consensus 201 ~~~~~~~~~~~i~ad~VIlAtG~~ 224 (481)
+.+ +..+.||.||+|||+.
T Consensus 161 t~d-----G~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 161 TNL-----GVEYKTKAVVVTTGTF 179 (637)
T ss_dssp ETT-----SCEEECSEEEECCTTC
T ss_pred ECC-----CcEEEeCEEEEccCCC
Confidence 775 5689999999999974
No 18
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.80 E-value=4.7e-19 Score=187.45 Aligned_cols=193 Identities=16% Similarity=0.161 Sum_probs=121.8
Q ss_pred CCCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEec----CCceeeccCCCcchhHHhhccCCCChh
Q 011610 47 TSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISG----GGRCNVTNGHCADKMILAGHYPRGHKE 121 (481)
Q Consensus 47 ~~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG----~g~~n~~~~~~~~~~~~~~~~~~~~~~ 121 (481)
....+||+|||||++|++||+.|++ .|++|+|||+.. ++.+....+ .+.|+......... .-...|....
T Consensus 104 ~~~~~DVVIVGgGpaGL~aA~~La~--~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~-gGag~~sdgk-- 178 (549)
T 3nlc_A 104 ENLTERPIVIGFGPCGLFAGLVLAQ--MGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGE-GGAGTFSDGK-- 178 (549)
T ss_dssp TTCCCCCEEECCSHHHHHHHHHHHH--TTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSST-TGGGTTSCCC--
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHH--CCCeEEEEEccCcccccccchhcccccccccccccceecc-CCcccccCCc--
Confidence 3356899999999999999999999 799999999763 321111000 11121111100000 0001111100
Q ss_pred chhhH-HhcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEE
Q 011610 122 FRGSF-FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLK 200 (481)
Q Consensus 122 ~~~~~-l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~ 200 (481)
+.... ...+...+..+++...|.+......+..+........+.+.|.+.+++.|++|+++++|+++..++ ++.+.|+
T Consensus 179 l~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~-~~v~gV~ 257 (549)
T 3nlc_A 179 LYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMED-GQITGVT 257 (549)
T ss_dssp CCCCSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESS-SBEEEEE
T ss_pred eEEEeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC-CEEEEEE
Confidence 10000 011223567788888887654432222222223346788899999999999999999999998875 4456788
Q ss_pred EeecccCceEEEEcCeEEEccCCChh-HHHHHHHcCCCcccCCCceeEeeeC
Q 011610 201 VEKRTMNLVECIEADYLLIASGSSQQ-GHRLAAQLGHSIVDPVPSLFTFKIA 251 (481)
Q Consensus 201 ~~~~~~~~~~~i~ad~VIlAtG~~g~-g~~la~~~G~~i~~~~p~l~~~~~~ 251 (481)
+.+ +.++.||.||+|+|+++. .+.+++..|+.+ +..|..+.++++
T Consensus 258 l~~-----G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~~-~~~~~~vgVrve 303 (549)
T 3nlc_A 258 LSN-----GEEIKSRHVVLAVGHSARDTFEMLHERGVYM-EAKPFSVGFRIE 303 (549)
T ss_dssp ETT-----SCEEECSCEEECCCTTCHHHHHHHHHTTCCC-EECCEEEEEEEE
T ss_pred ECC-----CCEEECCEEEECCCCChhhHHHHHHHcCCCc-ccceEEEEEEec
Confidence 875 668999999999998764 567888999885 456666666654
No 19
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.79 E-value=8.3e-18 Score=175.84 Aligned_cols=177 Identities=18% Similarity=0.269 Sum_probs=109.9
Q ss_pred eEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCC-ceEEecCCceeeccCCCcchhHHhh------ccCCCChhchh
Q 011610 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLS-KVKISGGGRCNVTNGHCADKMILAG------HYPRGHKEFRG 124 (481)
Q Consensus 52 DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~-k~~~sG~g~~n~~~~~~~~~~~~~~------~~~~~~~~~~~ 124 (481)
||+|||||++|++||+.|++ .|.+|+||||...++ +....|+..+.+.. .. ++..... .+. .....+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~--~G~~V~viek~~~~g~s~~a~Ggi~~~~~~-~d-~~~~~~~d~l~~g~~~-~d~~~v~ 75 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRR--AGKKVTLISKRIDGGSTPIAKGGVAASVGS-DD-SPELHAQDTIRVGDGL-CDVKTVN 75 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHH--TTCCEEEECSSTTCSSGGGCCSCEECCCST-TC-CHHHHHHHHHHHHTTC-SCHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCCCchHHHHhCCeEEeCCC-CC-CHHHHHHHHHHhcCCc-CCHHHHH
Confidence 89999999999999999998 789999999873333 22233332222221 11 1111111 111 1222222
Q ss_pred hHHhcCChHHHHHHHHhcCCcceee---cCCeeee-----cCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCe
Q 011610 125 SFFSLHGPMDTMSWFSDHGVELKTE---DDGRVFP-----VSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRK 196 (481)
Q Consensus 125 ~~l~~~~~~~~~~~~~~~Gi~~~~~---~~g~~~p-----~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~ 196 (481)
.+.. ...+.++|+.++|+++... ..+..+| .......+...|.+.+++.|++++++++| ++..++ +..
T Consensus 76 ~~~~--~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~-~~v 151 (472)
T 2e5v_A 76 YVTS--EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKD-GKV 151 (472)
T ss_dssp HHHH--HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEET-TEE
T ss_pred HHHH--HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeC-CEE
Confidence 2111 1235677888899876531 1222222 12235678888999888899999999999 998765 333
Q ss_pred EEEEEeecccCceEEEEcCeEEEccCC--------------ChhHHHHHHHcCCCcccC
Q 011610 197 FLLKVEKRTMNLVECIEADYLLIASGS--------------SQQGHRLAAQLGHSIVDP 241 (481)
Q Consensus 197 ~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------~g~g~~la~~~G~~i~~~ 241 (481)
.+|.+.+ . ...+.||.||+|||+ ++++..++.+.|..+..+
T Consensus 152 ~Gv~v~~---~-~g~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~ 206 (472)
T 2e5v_A 152 TGFVTEK---R-GLVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADM 206 (472)
T ss_dssp EEEEETT---T-EEECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECT
T ss_pred EEEEEEe---C-CCeEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCC
Confidence 4555431 0 235789999999996 355677888888877554
No 20
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.48 E-value=4.4e-14 Score=139.05 Aligned_cols=112 Identities=22% Similarity=0.374 Sum_probs=72.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
++|||+||||||||++||+.|++ .|++|+|+|++.+| |+| .+..+.+ .|+... .
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~--~g~~V~liE~~~~g--------G~~--~~~~~i~------~~p~~~--~------ 58 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASR--ANLKTVMIERGIPG--------GQM--ANTEEVE------NFPGFE--M------ 58 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTT--------GGG--GGCSCBC------CSTTCS--S------
T ss_pred CCCCEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCCC--------Cee--ecccccC------CcCCcc--c------
Confidence 57999999999999999999999 79999999998776 566 3332221 111000 0
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
....++.........+.+..+..+..+...... ....+...
T Consensus 59 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~------ 99 (312)
T 4gcm_A 59 ------------------------------ITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKG---EYKVINFG------ 99 (312)
T ss_dssp ------------------------------BCHHHHHHHHHHHHHHTTCEEEECCCCEEEECS---SCEEEECS------
T ss_pred ------------------------------cchHHHHHHHHHHHhhccccccceeeeeeeeee---cceeeccC------
Confidence 011223333334445566777777666655433 22333333
Q ss_pred eEEEEcCeEEEccCCCh
Q 011610 209 VECIEADYLLIASGSSQ 225 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g 225 (481)
+.++++|+||+|||+.+
T Consensus 100 ~~~~~~d~liiAtGs~~ 116 (312)
T 4gcm_A 100 NKELTAKAVIIATGAEY 116 (312)
T ss_dssp SCEEEEEEEEECCCEEE
T ss_pred CeEEEeceeEEcccCcc
Confidence 57899999999999754
No 21
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.47 E-value=2.7e-13 Score=135.88 Aligned_cols=180 Identities=17% Similarity=0.092 Sum_probs=105.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccC-CCcc--h-----------hHHhh
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNG-HCAD--K-----------MILAG 113 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~-~~~~--~-----------~~~~~ 113 (481)
+++||+|||||++|+++|+.|++ +|++|+|||+. .++...... ++.+-.... .... . ..+..
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~--~G~~V~vlE~~~~~~~~~s~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAA--GGHEVLVAEAAEGIGTGTSSR-NSEVIHAGIYYPADSLKARLCVRGKHLLYEYCA 79 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSSCSTTSS-SCCEECCCCSSCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCCCccCcC-CccccccCccCCCCCHhHHHHHHHHHHHHHHHH
Confidence 35899999999999999999999 79999999976 455211000 011100000 0000 0 00000
Q ss_pred c----cCCCChhch-hhHHhcCChHHHHHHHHhcCCc-ceeec--------------CCeeeecC--CChHHHHHHHHHH
Q 011610 114 H----YPRGHKEFR-GSFFSLHGPMDTMSWFSDHGVE-LKTED--------------DGRVFPVS--DSSSSVIDCLLTE 171 (481)
Q Consensus 114 ~----~~~~~~~~~-~~~l~~~~~~~~~~~~~~~Gi~-~~~~~--------------~g~~~p~~--~~a~~~~~~l~~~ 171 (481)
. +........ ...-.........++....|++ ...-. .+..+|.. .+...+...|.+.
T Consensus 80 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (369)
T 3dme_A 80 ARGVPHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGD 159 (369)
T ss_dssp HHTCCEECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCCCSEEEEETTCEEECHHHHHHHHHHH
T ss_pred HcCCCcccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCCceeeeeeECCCCEEECHHHHHHHHHHH
Confidence 0 000000000 0000000112334455556654 22110 01222222 2467889999999
Q ss_pred HHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHc-CCC
Q 011610 172 AKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQL-GHS 237 (481)
Q Consensus 172 ~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~-G~~ 237 (481)
+++.|++|+++++|++|..++ ++.+.|++.+ +...++.||.||+|+|++. ..+++.+ |++
T Consensus 160 ~~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~---g~~~~~~a~~VV~A~G~~s--~~l~~~~~g~~ 220 (369)
T 3dme_A 160 AESDGAQLVFHTPLIAGRVRP-EGGFELDFGG---AEPMTLSCRVLINAAGLHA--PGLARRIEGIP 220 (369)
T ss_dssp HHHTTCEEECSCCEEEEEECT-TSSEEEEECT---TSCEEEEEEEEEECCGGGH--HHHHHTEETSC
T ss_pred HHHCCCEEECCCEEEEEEEcC-CceEEEEECC---CceeEEEeCEEEECCCcch--HHHHHHhcCCC
Confidence 999999999999999999875 4457787764 1125899999999999875 5788888 876
No 22
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.47 E-value=2.2e-13 Score=137.66 Aligned_cols=164 Identities=20% Similarity=0.198 Sum_probs=92.6
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCC--CChhchhhH
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPR--GHKEFRGSF 126 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 126 (481)
.|||+||||||+|+++|+.|++ .|++|+|||+. .++....+ |++ ++. .....+.- .........
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~--~G~~V~v~Er~~~~~~~~~~-g~~---l~~-------~~l~~l~~~~~~~~~~~~~ 70 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAK--YGLKTLMIEKRPEIGSPVRC-GEG---LSK-------GILNEADIKADRSFIANEV 70 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSTTCSCCS-CCE---EET-------HHHHHTTCCCCTTTEEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCcEEEEeCCCCCCCCCce-ecc---cCH-------HHHHHcCCCchhhhhhccc
Confidence 4899999999999999999999 79999999964 55532211 110 000 01111100 000000000
Q ss_pred --HhcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeec
Q 011610 127 --FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKR 204 (481)
Q Consensus 127 --l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~ 204 (481)
...+.+.. ...+.......+..+........+...|.+.+.+.|++++++++|+++..++ +....+....
T Consensus 71 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~-~~~~~v~~~~- 142 (397)
T 3oz2_A 71 KGARIYGPSE------KRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN-GKVAGAKIRH- 142 (397)
T ss_dssp SEEEEECTTC------SSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET-TEEEEEEEEE-
T ss_pred ceEEEEeCCC------ceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeecc-ceeeeeeecc-
Confidence 00000000 0000000000000000112356777888899999999999999999998875 3333444332
Q ss_pred ccCceEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 205 TMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 205 ~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
.+...+++||.||.|+|..+ .+.+.+|...
T Consensus 143 -~~~~~~~~a~~vIgAdG~~S---~vr~~~g~~~ 172 (397)
T 3oz2_A 143 -NNEIVDVRAKMVIAADGFES---EFGRWAGLKS 172 (397)
T ss_dssp -TTEEEEEEEEEEEECCCTTC---HHHHHHTCGG
T ss_pred -cccceEEEEeEEEeCCcccc---HHHHHcCCCc
Confidence 23346799999999999875 4666777654
No 23
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.42 E-value=4.9e-13 Score=134.79 Aligned_cols=181 Identities=13% Similarity=0.088 Sum_probs=105.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcc--------hhHHhhccCCC-
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCAD--------KMILAGHYPRG- 118 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~--------~~~~~~~~~~~- 118 (481)
.++||+|||||++|+++|++|++ |++|+|||+. .++........|..+ .....+ ...+...+...
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La~---G~~V~vlE~~~~~g~~as~~~~g~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~ 82 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLSA---HGRVVVLEREAQPGYHSTGRSAAHYT--VAYGTPQVRALTAASRAFFDNPPAGF 82 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT---TSCEEEECSSSSTTSSGGGSCCCEEC--SSSSCHHHHHHHHHHHHHHHSCCTTS
T ss_pred CcCCEEEECCcHHHHHHHHHHhC---CCCEEEEECCCCccccccccccceee--cccCCHHHHHHHHHHHHHHHHhhhhh
Confidence 46899999999999999999994 8999999976 565211100011111 100000 00111111100
Q ss_pred --Chhchh-hHHh---cCCh---HHHHHHHHhcCCcceee-----------------cCCeeeecC--CChHHHHHHHHH
Q 011610 119 --HKEFRG-SFFS---LHGP---MDTMSWFSDHGVELKTE-----------------DDGRVFPVS--DSSSSVIDCLLT 170 (481)
Q Consensus 119 --~~~~~~-~~l~---~~~~---~~~~~~~~~~Gi~~~~~-----------------~~g~~~p~~--~~a~~~~~~l~~ 170 (481)
...+.. ..+. .-.. ....++++..|++...- ..+..+|.. .+...++..|.+
T Consensus 83 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 162 (381)
T 3nyc_A 83 CEHPLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGYLR 162 (381)
T ss_dssp CSSCSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHHHHH
T ss_pred CCcccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHHHHH
Confidence 000000 0000 0000 12233444455433210 012233322 246788999999
Q ss_pred HHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCcccCCCc
Q 011610 171 EAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSIVDPVPS 244 (481)
Q Consensus 171 ~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i~~~~p~ 244 (481)
.+++.|++|+++++|++|..++ +.+.|++.+ + +++||.||+|+|++. ..+++.+|+...++.|.
T Consensus 163 ~a~~~Gv~i~~~~~V~~i~~~~--~~~~V~t~~-----g-~i~a~~VV~A~G~~s--~~l~~~~g~~~~~~~p~ 226 (381)
T 3nyc_A 163 GIRRNQGQVLCNHEALEIRRVD--GAWEVRCDA-----G-SYRAAVLVNAAGAWC--DAIAGLAGVRPLGLQPK 226 (381)
T ss_dssp HHHHTTCEEESSCCCCEEEEET--TEEEEECSS-----E-EEEESEEEECCGGGH--HHHHHHHTCCCCCCEEE
T ss_pred HHHHCCCEEEcCCEEEEEEEeC--CeEEEEeCC-----C-EEEcCEEEECCChhH--HHHHHHhCCCCCceeee
Confidence 9999999999999999999875 568888774 4 899999999999876 46777888752244443
No 24
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.42 E-value=9.7e-13 Score=133.90 Aligned_cols=177 Identities=18% Similarity=0.213 Sum_probs=101.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcc--------hhH----HhhccC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCAD--------KMI----LAGHYP 116 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~--------~~~----~~~~~~ 116 (481)
.++||+|||||++|+++|++|++ .|.+|+|||+...+.....+++....+......+ ... +.....
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~--~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAE--RGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRCE 80 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcCCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHHHHhC
Confidence 35899999999999999999999 7999999997755421111111111111111000 000 000000
Q ss_pred CC----Chhch--hhHH--hcCChHHHHHHHHhcCCcceeec-----------------CCeeeecC--CChHHHHHHHH
Q 011610 117 RG----HKEFR--GSFF--SLHGPMDTMSWFSDHGVELKTED-----------------DGRVFPVS--DSSSSVIDCLL 169 (481)
Q Consensus 117 ~~----~~~~~--~~~l--~~~~~~~~~~~~~~~Gi~~~~~~-----------------~g~~~p~~--~~a~~~~~~l~ 169 (481)
.. ...+. .... ......+..+++...|++...-+ .+..+|.. .....++..|.
T Consensus 81 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 160 (397)
T 2oln_A 81 RRLIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALF 160 (397)
T ss_dssp CCCEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHHH
T ss_pred ccHHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHHHH
Confidence 00 00000 0000 00112344455666665432100 01112211 13467888999
Q ss_pred HHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCC
Q 011610 170 TEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHS 237 (481)
Q Consensus 170 ~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~ 237 (481)
+.+++.|++|+++++|++|..++ +.+.|++.+ .+++||.||+|+|++. ..+++.+|..
T Consensus 161 ~~a~~~Gv~i~~~~~V~~i~~~~--~~v~v~t~~------g~i~a~~VV~A~G~~s--~~l~~~~g~~ 218 (397)
T 2oln_A 161 TLAQAAGATLRAGETVTELVPDA--DGVSVTTDR------GTYRAGKVVLACGPYT--NDLLEPLGAR 218 (397)
T ss_dssp HHHHHTTCEEEESCCEEEEEEET--TEEEEEESS------CEEEEEEEEECCGGGH--HHHHGGGTCC
T ss_pred HHHHHcCCEEECCCEEEEEEEcC--CeEEEEECC------CEEEcCEEEEcCCcCh--HHHhhhcCCC
Confidence 99999999999999999998765 567776653 4799999999999875 3567777753
No 25
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.41 E-value=8.9e-13 Score=136.03 Aligned_cols=84 Identities=15% Similarity=0.180 Sum_probs=62.9
Q ss_pred ChHHHHHHHHHHHHhCCCEEEcCc---eEEEEEecCCCCeEE-EEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcC
Q 011610 160 SSSSVIDCLLTEAKHRGVVLQTGK---VVTTASSDNAGRKFL-LKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLG 235 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~Gv~i~~~~---~V~~i~~~~~~~~~~-V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G 235 (481)
.+..++..|.+.+++.|++|++++ +|++|..++ +.+. |++.+ +.+++||.||+|+|++.. .++. ++
T Consensus 159 ~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~--~~v~gV~t~~-----G~~i~Ad~VV~AtG~~s~--~l~~-l~ 228 (438)
T 3dje_A 159 HARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN--NDVKGAVTAD-----GKIWRAERTFLCAGASAG--QFLD-FK 228 (438)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET--TEEEEEEETT-----TEEEECSEEEECCGGGGG--GTSC-CT
T ss_pred cHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC--CeEEEEEECC-----CCEEECCEEEECCCCChh--hhcC-cc
Confidence 357889999999999999999999 999998865 4554 88875 668999999999998753 3333 55
Q ss_pred CCcccCCCceeEeeeCcc
Q 011610 236 HSIVDPVPSLFTFKIADS 253 (481)
Q Consensus 236 ~~i~~~~p~l~~~~~~~~ 253 (481)
..+.|....+..+.+.+.
T Consensus 229 ~~~~p~~~~~~~~~l~~~ 246 (438)
T 3dje_A 229 NQLRPTAWTLVHIALKPE 246 (438)
T ss_dssp TCCEEEEEEEEEEECCGG
T ss_pred cceeeEEEEEEEEEcChH
Confidence 555555444555555543
No 26
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.41 E-value=2.5e-12 Score=128.01 Aligned_cols=128 Identities=17% Similarity=0.190 Sum_probs=85.4
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
++||+|||||++|+++|+.|++ .|++|+|+|+. .+| |.|....... ... ....+ .
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~--~g~~v~vie~~~~~g--------g~~~~~~~~~--------~~~-~~~~~-----~ 58 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR--SGLSYVILDAEASPG--------GAWQHAWHSL--------HLF-SPAGW-----S 58 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--SSCCEEEECCSSSSS--------GGGGGSCTTC--------BCS-SCGGG-----S
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCCCCC--------CcccCCCCCc--------Eec-Cchhh-----h
Confidence 4799999999999999999999 78999999965 555 3332111000 000 00000 0
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEE-EEEeecccC
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFL-LKVEKRTMN 207 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~-V~~~~~~~~ 207 (481)
.+ .+.... .....|| ....+.+.+.+.+++.|++++++++|+++..++ +.|. |++.+
T Consensus 59 ~~-----------~~~~~~--~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~~v~~~~---- 116 (357)
T 4a9w_A 59 SI-----------PGWPMP--ASQGPYP---ARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFG--ERLRVVARDG---- 116 (357)
T ss_dssp CC-----------SSSCCC--CCSSSSC---BHHHHHHHHHHHHHHTTCCEECSCCEEEEEEET--TEEEEEETTS----
T ss_pred hC-----------CCCCCC--CCccCCC---CHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECC--CcEEEEEeCC----
Confidence 00 000000 1112222 346778888889999999999999999998875 6777 77764
Q ss_pred ceEEEEcCeEEEccCCCh
Q 011610 208 LVECIEADYLLIASGSSQ 225 (481)
Q Consensus 208 ~~~~i~ad~VIlAtG~~g 225 (481)
+ ++.+|+||+|||+.+
T Consensus 117 -g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 117 -R-QWLARAVISATGTWG 132 (357)
T ss_dssp -C-EEEEEEEEECCCSGG
T ss_pred -C-EEEeCEEEECCCCCC
Confidence 4 899999999999643
No 27
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.41 E-value=1.3e-12 Score=132.17 Aligned_cols=173 Identities=15% Similarity=0.133 Sum_probs=99.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCC-c--ch-------h----HHhhc
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHC-A--DK-------M----ILAGH 114 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~-~--~~-------~----~~~~~ 114 (481)
+++||+|||||++|+++|++|++ .|.+|+|||+...+.....++. ...+.+... . .. . .+...
T Consensus 2 ~~~dvvIIGaG~~Gl~~A~~La~--~G~~V~vie~~~~~~~~g~s~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~ 78 (389)
T 2gf3_A 2 THFDVIVVGAGSMGMAAGYQLAK--QGVKTLLVDAFDPPHTNGSHHG-DTRIIRHAYGEGREYVPLALRSQELWYELEKE 78 (389)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSCSSCSSSSSCS-SEEEECSSCTTCGGGHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCCCCCCCCC-cchhhhhhhcCCchHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999 7999999997755421111111 111111100 0 00 0 01111
Q ss_pred cCCC----ChhchhhHHh-cC-ChHHHHHHHHhcCCcceeec-----------------CCeeeecC--CChHHHHHHHH
Q 011610 115 YPRG----HKEFRGSFFS-LH-GPMDTMSWFSDHGVELKTED-----------------DGRVFPVS--DSSSSVIDCLL 169 (481)
Q Consensus 115 ~~~~----~~~~~~~~l~-~~-~~~~~~~~~~~~Gi~~~~~~-----------------~g~~~p~~--~~a~~~~~~l~ 169 (481)
+... ...+. .... .. ......++++..|++...-. .+.++|.. .....+...|.
T Consensus 79 ~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 157 (389)
T 2gf3_A 79 THHKIFTKTGVLV-FGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYR 157 (389)
T ss_dssp CSSCCEECCCEEE-EEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHH
T ss_pred hCCcceeecceEE-EcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHH
Confidence 1000 00000 0000 00 01233345555665432110 01112211 12468889999
Q ss_pred HHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcC
Q 011610 170 TEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLG 235 (481)
Q Consensus 170 ~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G 235 (481)
+.+++.|++++++++|++++.++ +.+.|++.+ .++.||.||+|+|.+. ..++..+|
T Consensus 158 ~~~~~~Gv~i~~~~~v~~i~~~~--~~~~v~~~~------g~~~a~~vV~A~G~~~--~~l~~~~g 213 (389)
T 2gf3_A 158 ELAEARGAKVLTHTRVEDFDISP--DSVKIETAN------GSYTADKLIVSMGAWN--SKLLSKLN 213 (389)
T ss_dssp HHHHHTTCEEECSCCEEEEEECS--SCEEEEETT------EEEEEEEEEECCGGGH--HHHGGGGT
T ss_pred HHHHHCCCEEEcCcEEEEEEecC--CeEEEEeCC------CEEEeCEEEEecCccH--HHHhhhhc
Confidence 99999999999999999999865 557777653 4799999999999875 35666666
No 28
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.41 E-value=1.4e-12 Score=131.82 Aligned_cols=68 Identities=21% Similarity=0.191 Sum_probs=55.7
Q ss_pred ChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCC
Q 011610 160 SSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHS 237 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~ 237 (481)
....+...|.+.+++.|++++++++|+++..++ +.+.|++.+ + ++.||.||+|+|.+. ..++..+|..
T Consensus 162 ~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~~v~~~~-----g-~~~a~~vV~A~G~~s--~~l~~~~~~~ 229 (382)
T 1ryi_A 162 EPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDG--EALFIKTPS-----G-DVWANHVVVASGVWS--GMFFKQLGLN 229 (382)
T ss_dssp CHHHHHHHHHHHHHHTTCEEETTCCCCEEECSS--SSEEEEETT-----E-EEEEEEEEECCGGGT--HHHHHHTTCC
T ss_pred cHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC--CEEEEEcCC-----c-eEEcCEEEECCChhH--HHHHHhcCCC
Confidence 457788999999999999999999999998765 556777664 4 799999999999875 3577777764
No 29
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.41 E-value=2.6e-12 Score=129.86 Aligned_cols=179 Identities=19% Similarity=0.146 Sum_probs=104.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCce--EEecCCceeeccCCCc----chhHHh----hc----
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKV--KISGGGRCNVTNGHCA----DKMILA----GH---- 114 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~--~~sG~g~~n~~~~~~~----~~~~~~----~~---- 114 (481)
.++||+|||||++|+++|++|++ .|.+|+|||+..++... ..+|.-++........ ....+. ..
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~--~G~~V~lle~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 81 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAK--RGEEVTVIEKRFIGSGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSEEYGFS 81 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSTTCSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCCCCccccccCeeeecCCChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999 79999999987665311 1111111111100000 000000 00
Q ss_pred cCCCChhchhhHHhcCCh------HHHHHHHHhcCCcceeec-----------------CCeeeecC--CChHHHHHHHH
Q 011610 115 YPRGHKEFRGSFFSLHGP------MDTMSWFSDHGVELKTED-----------------DGRVFPVS--DSSSSVIDCLL 169 (481)
Q Consensus 115 ~~~~~~~~~~~~l~~~~~------~~~~~~~~~~Gi~~~~~~-----------------~g~~~p~~--~~a~~~~~~l~ 169 (481)
+.... .+. ...+. ....+++++.|++....+ .+.++|.. .+...+...|.
T Consensus 82 ~~~~g-~l~----~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 156 (382)
T 1y56_B 82 FKQTG-YLF----LLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFA 156 (382)
T ss_dssp EECCC-EEE----EECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHH
T ss_pred eeccc-eEE----EEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHH
Confidence 00000 000 00010 123344455665433211 01122221 14678889999
Q ss_pred HHHHhCCCEEEcCceEEEEEecCCCCeEE-EEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCc-ccCCCc
Q 011610 170 TEAKHRGVVLQTGKVVTTASSDNAGRKFL-LKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI-VDPVPS 244 (481)
Q Consensus 170 ~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~-V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i-~~~~p~ 244 (481)
+.+++.|++|+++++|+++..++ +.+. |++.+ + +++||.||+|+|++. ..+++.+|... .|+.|.
T Consensus 157 ~~~~~~Gv~i~~~~~v~~i~~~~--~~v~gv~~~~-----g-~i~a~~VV~A~G~~s--~~l~~~~g~~~~~~~~~~ 223 (382)
T 1y56_B 157 VKAKEYGAKLLEYTEVKGFLIEN--NEIKGVKTNK-----G-IIKTGIVVNATNAWA--NLINAMAGIKTKIPIEPY 223 (382)
T ss_dssp HHHHHTTCEEECSCCEEEEEESS--SBEEEEEETT-----E-EEECSEEEECCGGGH--HHHHHHHTCCSCCCCEEE
T ss_pred HHHHHCCCEEECCceEEEEEEEC--CEEEEEEECC-----c-EEECCEEEECcchhH--HHHHHHcCCCcCcCCCee
Confidence 99999999999999999998875 4554 77764 4 799999999999875 34667777652 244443
No 30
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=99.41 E-value=9.2e-14 Score=138.54 Aligned_cols=67 Identities=18% Similarity=0.261 Sum_probs=56.0
Q ss_pred cCCCceeEEecCCCCC--CCCC-c----ccccccCCCCeEEEEEEeecccCcchHHHHHHHHHHHHHHHHHhHHhhHhhh
Q 011610 404 KGQFKDEFVTAGGVPL--SEIS-L----NTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSNDATL 476 (481)
Q Consensus 404 ~~~~~~a~vt~GGv~~--~ei~-~----~t~esk~~~gLy~~GE~ldv~g~~GGynl~~A~~sG~~AG~~aa~~~~~~~~ 476 (481)
..|++.|++++.|+.. +.|| | .|||+|.+||||||||+.+++| |. .|+++|.+||.+|+.+++.+++
T Consensus 293 IpGLE~a~~~r~G~~~ey~~i~sP~~L~~tle~k~~~~Lf~AGqi~G~~G----y~--eAaa~Gl~AG~naa~~~~g~~p 366 (443)
T 3g5s_A 293 IPGLENAEIVRYGVMHRNTYLNAPRLLGETLEFREAEGLYAAGVLAGVEG----YL--ESAATGFLAGLNAARKALGLPP 366 (443)
T ss_dssp STTCTTCCEEECCEEEEEEEECHHHHBCTTSEETTEEEEEECGGGGTBCS----HH--HHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcChhhCeeeeCcEeecCceecChhHhChhceecCCCCEEECccccccHH----HH--HHHHhHHHHHHHHHHHhcCCCC
Confidence 5688999999999987 7788 6 7999999999999996555543 55 6777999999999998877654
No 31
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.39 E-value=5e-11 Score=122.28 Aligned_cols=63 Identities=19% Similarity=0.111 Sum_probs=50.4
Q ss_pred CeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCC
Q 011610 152 GRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSS 224 (481)
Q Consensus 152 g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~ 224 (481)
+..+|. .....+.+.|.+.+++.|++|+++++|++|..++ +.+ |.++ +.++.||.||+|+|.+
T Consensus 180 g~~~~~-gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~v-V~~~------g~~~~ad~Vv~a~~~~ 242 (421)
T 3nrn_A 180 GPGLIR-GGCKAVIDELERIIMENKGKILTRKEVVEINIEE--KKV-YTRD------NEEYSFDVAISNVGVR 242 (421)
T ss_dssp SCEEET-TCHHHHHHHHHHHHHTTTCEEESSCCEEEEETTT--TEE-EETT------CCEEECSEEEECSCHH
T ss_pred Ccceec-CCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEEC--CEE-EEeC------CcEEEeCEEEECCCHH
Confidence 345553 3467889999999999999999999999998765 566 5433 5689999999999964
No 32
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.37 E-value=4.9e-12 Score=137.94 Aligned_cols=80 Identities=11% Similarity=0.150 Sum_probs=59.2
Q ss_pred ChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCcc
Q 011610 160 SSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSIV 239 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i~ 239 (481)
....++..|.+.+++.|++|+++++|++|..++ +.+.|++.+ +.++.||.||+|+|++.. .++...++.+.
T Consensus 415 ~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v~V~t~~-----G~~i~Ad~VVlAtG~~s~--~l~~~~~lpl~ 485 (676)
T 3ps9_A 415 CPAELTRNVLELAQQQGLQIYYQYQLQNFSRKD--DCWLLNFAG-----DQQATHSVVVLANGHQIS--RFSQTSTLPVY 485 (676)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEEEEEETT-----SCEEEESEEEECCGGGGG--CSTTTTTCSCE
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC--CeEEEEECC-----CCEEECCEEEECCCcchh--ccccccCCcce
Confidence 467889999999999999999999999999875 668888764 567999999999998652 23333444444
Q ss_pred cCCCceeEe
Q 011610 240 DPVPSLFTF 248 (481)
Q Consensus 240 ~~~p~l~~~ 248 (481)
+.+..++.+
T Consensus 486 p~rGq~~~~ 494 (676)
T 3ps9_A 486 SVAGQVSHI 494 (676)
T ss_dssp EEEEEEEEE
T ss_pred eecCEEEEE
Confidence 433333333
No 33
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.36 E-value=1.4e-12 Score=142.52 Aligned_cols=73 Identities=10% Similarity=0.145 Sum_probs=55.6
Q ss_pred ChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceE-EEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 160 SSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVE-CIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~-~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
....++..|.+.+++.|++|+++++|++|..++ +.+.|++.+ +. .+.||.||+|+|++.. .++...+..+
T Consensus 410 ~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v~V~t~~-----G~~~i~Ad~VVlAtG~~s~--~l~~~~~lpl 480 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGMTCHYQHELQRLKRID--SQWQLTFGQ-----SQAAKHHATVILATGHRLP--EWEQTHHLPL 480 (689)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEECS--SSEEEEEC------CCCCEEESEEEECCGGGTT--CSTTTTTSCC
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC--CeEEEEeCC-----CcEEEECCEEEECCCcchh--ccccccCCcc
Confidence 457889999999999999999999999999876 558888765 44 7999999999998642 2333344444
Q ss_pred ccC
Q 011610 239 VDP 241 (481)
Q Consensus 239 ~~~ 241 (481)
.+.
T Consensus 481 ~p~ 483 (689)
T 3pvc_A 481 SAV 483 (689)
T ss_dssp EEE
T ss_pred ccc
Confidence 333
No 34
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.35 E-value=1.5e-11 Score=125.04 Aligned_cols=184 Identities=19% Similarity=0.134 Sum_probs=105.7
Q ss_pred CCCCeEEEECCchHHHHHHHHHhc-cCCC-CcEEEEeCCCCCCc--eEEecCCceeeccCCCcc----hhHHh----hcc
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKT-VAPK-LNVVIIEKGKPLSK--VKISGGGRCNVTNGHCAD----KMILA----GHY 115 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~-~~~g-~~V~llE~~~~g~k--~~~sG~g~~n~~~~~~~~----~~~~~----~~~ 115 (481)
+.++||+|||||++|+++|++|++ . | .+|+|||+..++.. ...+|.-++......... ...+. ...
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~--G~~~V~vlE~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 96 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNH--GITNVAVLEKGWLAGGNMARNTTIIRSNYLWDESAGIYEKSLKLWEQLPEDL 96 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHH--CCCCEEEECSSSTTCSGGGTSCCCBCCCCSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhc--CCCcEEEEeCCCCCCCcccccCceeeecCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 457899999999999999999998 5 6 89999998766531 111111111111000000 00000 000
Q ss_pred CCCChhchh-hHHh-cCCh------HHHHHHHHhcCCcceeec----------------------CCeeeecC--CChHH
Q 011610 116 PRGHKEFRG-SFFS-LHGP------MDTMSWFSDHGVELKTED----------------------DGRVFPVS--DSSSS 163 (481)
Q Consensus 116 ~~~~~~~~~-~~l~-~~~~------~~~~~~~~~~Gi~~~~~~----------------------~g~~~p~~--~~a~~ 163 (481)
.. ...+.. ..+. .... ....+++...|+++..-+ .+..+|.. .+...
T Consensus 97 ~~-~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (405)
T 2gag_B 97 EY-DFLFSQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDDIRYPVMGATWQPRAGIAKHDH 175 (405)
T ss_dssp TC-CCCCBCCCEEEEECSHHHHHHHHHHHHHHHTBTCCCEEECHHHHHHHCTTSCCSTTSSSCCCEEEEETTCBBCCHHH
T ss_pred CC-CcCEecccEEEEEcCHHHHHHHHHHHHHHHhcCCCceEeCHHHHHhhCCCCcccccccccceeEEEeCCCccCCHHH
Confidence 00 000000 0000 0011 123344555665433210 01122211 24567
Q ss_pred HHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCcccCCC
Q 011610 164 VIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSIVDPVP 243 (481)
Q Consensus 164 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i~~~~p 243 (481)
+...|.+.+++.|++++++++|+++..++ +..+.|++.+ + ++.||.||+|+|++. ..+++.+|+.+ |..|
T Consensus 176 ~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~~~v~~~~-----g-~~~a~~vV~a~G~~s--~~l~~~~g~~~-~~~~ 245 (405)
T 2gag_B 176 VAWAFARKANEMGVDIIQNCEVTGFIKDG-EKVTGVKTTR-----G-TIHAGKVALAGAGHS--SVLAEMAGFEL-PIQS 245 (405)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEEEEEETT-----C-CEEEEEEEECCGGGH--HHHHHHHTCCC-CEEE
T ss_pred HHHHHHHHHHHCCCEEEcCCeEEEEEEeC-CEEEEEEeCC-----c-eEECCEEEECCchhH--HHHHHHcCCCC-Cccc
Confidence 88999999999999999999999998875 4556777764 4 799999999999875 35677778764 4444
Q ss_pred c
Q 011610 244 S 244 (481)
Q Consensus 244 ~ 244 (481)
.
T Consensus 246 ~ 246 (405)
T 2gag_B 246 H 246 (405)
T ss_dssp E
T ss_pred c
Confidence 4
No 35
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.31 E-value=8.6e-12 Score=125.48 Aligned_cols=57 Identities=18% Similarity=0.151 Sum_probs=48.4
Q ss_pred hHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCCh
Q 011610 161 SSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 161 a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g 225 (481)
...++..|.+.+++.|++++++++|++++.++ +.+.|++.+ + ++.||.||+|+|++.
T Consensus 148 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~~~v~~~~-----g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQLFNCPVTAIRHDD--DGVTIETAD-----G-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECS--SSEEEEESS-----C-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcC--CEEEEEECC-----C-eEEcCEEEEcCCccH
Confidence 46788999999999999999999999998865 457777764 3 599999999999865
No 36
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.31 E-value=3e-12 Score=125.42 Aligned_cols=114 Identities=22% Similarity=0.301 Sum_probs=77.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEE-EeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHH
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVI-IEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~l-lE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (481)
.++||+|||||++|++||+.|++ .|++|+| +|++.+| |.+..... .. .|+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~li~e~~~~g--------G~~~~~~~--~~------~~~~~--------- 55 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATR--GGLKNVVMFEKGMPG--------GQITSSSE--IE------NYPGV--------- 55 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH--HTCSCEEEECSSSTT--------GGGGGCSC--BC------CSTTC---------
T ss_pred CCceEEEECCCHHHHHHHHHHHH--CCCCeEEEEeCCCCC--------ceeeeece--ec------cCCCC---------
Confidence 46899999999999999999999 6899999 9997665 44322111 00 01000
Q ss_pred hcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccC
Q 011610 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMN 207 (481)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~ 207 (481)
+.......+...+.+.+++.|++++.+ +|.++ .++..+.|.+.+.. +
T Consensus 56 ----------------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~---~ 102 (315)
T 3r9u_A 56 ----------------------------AQVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEG---G 102 (315)
T ss_dssp ----------------------------CSCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETT---S
T ss_pred ----------------------------CCCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEec---C
Confidence 001134566677777888889999988 89888 43201457753332 1
Q ss_pred ceEEEEcCeEEEccCCC
Q 011610 208 LVECIEADYLLIASGSS 224 (481)
Q Consensus 208 ~~~~i~ad~VIlAtG~~ 224 (481)
+ ++.+|+||+|||+.
T Consensus 103 -~-~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 103 -K-TELAKAVIVCTGSA 117 (315)
T ss_dssp -C-EEEEEEEEECCCEE
T ss_pred -C-EEEeCEEEEeeCCC
Confidence 3 89999999999974
No 37
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.26 E-value=5.2e-11 Score=126.88 Aligned_cols=76 Identities=18% Similarity=0.144 Sum_probs=59.9
Q ss_pred CChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCC
Q 011610 159 DSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHS 237 (481)
Q Consensus 159 ~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~ 237 (481)
.+...+...|.+.+.+.|++|+++++|+++..++ ++.++|++.+..++....++||.||+|+|.+. ..+++.+|..
T Consensus 167 vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~-g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s--~~l~~~~g~~ 242 (561)
T 3da1_A 167 TDDARLTLEIMKEAVARGAVALNYMKVESFIYDQ-GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV--DTLREKDRSK 242 (561)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEET-TEEEEEEEEETTTCCEEEEEEEEEEECCGGGH--HHHHHTTTCC
T ss_pred EcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-CeEEEEEEEEcCCCceEEEECCEEEECCCcch--HHHHHhcCCC
Confidence 3567888899999999999999999999999875 44567887653334456899999999999876 3567777754
No 38
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.25 E-value=3.9e-11 Score=128.02 Aligned_cols=168 Identities=16% Similarity=0.135 Sum_probs=94.2
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHH
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (481)
++.+||+|||||++|+++|+.|++ .|++|+|||+...... .++....+ .....+...+. +...+.
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~--~G~~V~VlEr~~~~~~-----~~r~~~l~---~~s~~~l~~lG-----l~~~l~ 111 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRA--GGVGALVLEKLVEPVG-----HDRAGALH---IRTVETLDLRG-----LLDRFL 111 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHH--TTCCEEEEBSCSSCCC-----SSSCCCBC---HHHHHHHHTTT-----CHHHHT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEcCCCCCCC-----CceEEEEC---HHHHHHHHHcC-----ChHHHH
Confidence 457899999999999999999999 7999999996533210 11110010 01111111111 000000
Q ss_pred hcCChHHHHHHHHhc---CCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeec
Q 011610 128 SLHGPMDTMSWFSDH---GVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKR 204 (481)
Q Consensus 128 ~~~~~~~~~~~~~~~---Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~ 204 (481)
..........+... .+..........+........+...|.+.+++.|++|+++++|++++.++ +.+.|++..
T Consensus 112 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~--~~v~v~~~~- 187 (570)
T 3fmw_A 112 -EGTQVAKGLPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDA--EAVEVTVAG- 187 (570)
T ss_dssp -TSCCBCSBCCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCS--SCEEEEEEE-
T ss_pred -hcCcccCCceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CeEEEEEEe-
Confidence 00000000000000 00000000111122234567888999999988899999999999998875 567777632
Q ss_pred ccCce-EEEEcCeEEEccCCChhHHHHHHHcCCCcc
Q 011610 205 TMNLV-ECIEADYLLIASGSSQQGHRLAAQLGHSIV 239 (481)
Q Consensus 205 ~~~~~-~~i~ad~VIlAtG~~g~g~~la~~~G~~i~ 239 (481)
.+ + .+++||.||.|+|+++ .+.+.+|+...
T Consensus 188 -~~-G~~~~~a~~vV~ADG~~S---~vR~~lGi~~~ 218 (570)
T 3fmw_A 188 -PS-GPYPVRARYGVGCDGGRS---TVRRLAADRFP 218 (570)
T ss_dssp -TT-EEEEEEESEEEECSCSSC---HHHHHTTCCCC
T ss_pred -CC-CcEEEEeCEEEEcCCCCc---hHHHHcCCCCc
Confidence 11 4 6899999999999876 45667777643
No 39
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.25 E-value=1.1e-10 Score=122.68 Aligned_cols=167 Identities=17% Similarity=0.169 Sum_probs=96.5
Q ss_pred CCCCCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhch
Q 011610 45 THTSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFR 123 (481)
Q Consensus 45 ~~~~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~ 123 (481)
+..++++||+||||||+|+++|+.|++ .|.+|+|||+. .+.. .+++...+. ...++...+.-.. .+.
T Consensus 6 ~~~~~~~dVlIVGaGpaGl~~A~~La~--~G~~v~vlE~~~~~~~------~~r~~~l~~---~~~~~l~~lGl~~-~~~ 73 (500)
T 2qa1_A 6 HHHRSDAAVIVVGAGPAGMMLAGELRL--AGVEVVVLERLVERTG------ESRGLGFTA---RTMEVFDQRGILP-RFG 73 (500)
T ss_dssp --CCSBCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCCC-CC------CCCSEEECH---HHHHHHHTTTCGG-GGC
T ss_pred CCccCCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCCCCC------CCCcceECH---HHHHHHHHCCCHH-HHH
Confidence 456678999999999999999999999 79999999965 3321 122211111 0111222111000 000
Q ss_pred hhHHhcCChHHHHHHHHhcCCcceeecCCeeee--cCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEE
Q 011610 124 GSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFP--VSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKV 201 (481)
Q Consensus 124 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p--~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~ 201 (481)
.. ...... .+ .++.+........+| .......+.+.|.+.+++.|++|+++++|++++.++ +.+.|++
T Consensus 74 ~~--~~~~~~---~~---~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~ 143 (500)
T 2qa1_A 74 EV--ETSTQG---HF---GGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDG--AGVTVEV 143 (500)
T ss_dssp SC--CBCCEE---EE---TTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEET--TEEEEEE
T ss_pred hc--cccccc---cc---cceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcC--CeEEEEE
Confidence 00 000000 00 011011000000011 112346778889999999999999999999999875 5677777
Q ss_pred eecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 202 EKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 202 ~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
.+. ++..+++||+||.|+|+.+ .+.+.+|+..
T Consensus 144 ~~~--~g~~~~~a~~vVgADG~~S---~VR~~lg~~~ 175 (500)
T 2qa1_A 144 RGP--EGKHTLRAAYLVGCDGGRS---SVRKAAGFDF 175 (500)
T ss_dssp EET--TEEEEEEESEEEECCCTTC---HHHHHTTCCC
T ss_pred EcC--CCCEEEEeCEEEECCCcch---HHHHHcCCCc
Confidence 651 1124799999999999876 3556677654
No 40
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.24 E-value=8.9e-11 Score=120.12 Aligned_cols=155 Identities=21% Similarity=0.172 Sum_probs=93.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
+.+||+|||||++|+++|+.|++ .|.+|+|+|+....+. +.|.+ ..... ..+. .
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~--~G~~V~v~E~~~~~~~----~~g~~--~~~~~---~~~l---------------~ 57 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNK--SGFKVKIVEKQKFPRF----VIGES--LLPRC---MEHL---------------D 57 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHT--TTCCEEEECSSCSSCC----CSCCB--CCGGG---HHHH---------------H
T ss_pred ccCcEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCCCCC----cccCc--ccHhH---HHHH---------------H
Confidence 35899999999999999999999 7999999997654320 01111 00000 0111 1
Q ss_pred cCChHHHHHHHHhcCCccee----ecCC--------------eeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEe
Q 011610 129 LHGPMDTMSWFSDHGVELKT----EDDG--------------RVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASS 190 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~----~~~g--------------~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~ 190 (481)
..+.. +.+...+..... .... ..+....+...+...|.+.+++.|++|+++++|+++..
T Consensus 58 ~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~ 134 (421)
T 3nix_A 58 EAGFL---DAVKAQGFQQKFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKF 134 (421)
T ss_dssp HTTCH---HHHHHTTCEEECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEE
T ss_pred HcCCh---HHHHHcCCcccCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEE
Confidence 11111 111222211100 0000 00111235678889999999989999999999999988
Q ss_pred cCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 191 DNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 191 ~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
++ +.+.+.+.. .++...+++||.||+|+|..+ .+.+.+|.+.
T Consensus 135 ~~--~~~~v~v~~-~~g~~~~~~a~~vV~A~G~~s---~l~~~~g~~~ 176 (421)
T 3nix_A 135 FG--TDSVTTIED-INGNKREIEARFIIDASGYGR---VIPRMFGLDK 176 (421)
T ss_dssp ET--TEEEEEEEE-TTSCEEEEEEEEEEECCGGGC---HHHHHTTCEE
T ss_pred eC--CEEEEEEEc-CCCCEEEEEcCEEEECCCCch---hhHHhcCCCC
Confidence 75 444444321 112223799999999999765 4567778764
No 41
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.24 E-value=1.4e-10 Score=121.81 Aligned_cols=166 Identities=17% Similarity=0.157 Sum_probs=95.8
Q ss_pred CCCCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchh
Q 011610 46 HTSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRG 124 (481)
Q Consensus 46 ~~~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (481)
..++++||+||||||+|+++|+.|++ .|.+|+|||+. .+.. .+++...+. ...++...+.-.. .+..
T Consensus 8 ~~~~~~dVlIVGaGpaGl~~A~~La~--~G~~v~vlE~~~~~~~------~~r~~~l~~---~~~~~l~~lGl~~-~~~~ 75 (499)
T 2qa2_A 8 HHRSDASVIVVGAGPAGLMLAGELRL--GGVDVMVLEQLPQRTG------ESRGLGFTA---RTMEVFDQRGILP-AFGP 75 (499)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESCSSCCC------CCCSEEECH---HHHHHHHHTTCGG-GGCS
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCCCCCC------CCceeEECH---HHHHHHHHCCCHH-HHHh
Confidence 44567999999999999999999999 79999999965 3321 122211111 1111222111000 0000
Q ss_pred hHHhcCChHHHHHHHHhcCCcceeec--CCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEe
Q 011610 125 SFFSLHGPMDTMSWFSDHGVELKTED--DGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVE 202 (481)
Q Consensus 125 ~~l~~~~~~~~~~~~~~~Gi~~~~~~--~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~ 202 (481)
. ..... ..+ .++.+.... ....+........+...|.+.+.+.|++|+++++|++++.++ +.+.|++.
T Consensus 76 ~--~~~~~---~~~---~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~~ 145 (499)
T 2qa2_A 76 V--ETSTQ---GHF---GGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEG--DHVVVEVE 145 (499)
T ss_dssp C--CEESE---EEE---TTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECS--SCEEEEEE
T ss_pred c--ccccc---cee---cceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEEEEEE
Confidence 0 00000 000 011111000 011111112356788899999999999999999999999875 56777776
Q ss_pred ecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 203 KRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 203 ~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
+. . +..+++||+||.|+|+.+ .+.+.+|+..
T Consensus 146 ~~-~-g~~~~~a~~vVgADG~~S---~VR~~lg~~~ 176 (499)
T 2qa2_A 146 GP-D-GPRSLTTRYVVGCDGGRS---TVRKAAGFDF 176 (499)
T ss_dssp CS-S-CEEEEEEEEEEECCCTTC---HHHHHTTCCC
T ss_pred cC-C-CcEEEEeCEEEEccCccc---HHHHHcCCCC
Confidence 41 1 124799999999999876 3556677654
No 42
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.23 E-value=3.6e-12 Score=133.89 Aligned_cols=177 Identities=20% Similarity=0.217 Sum_probs=99.8
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHH
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (481)
...+||+|||||++|+++|+.|++ .|.+|+|||+.... ++|+..+.. + . .. ..+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~--~G~~V~liEk~~~~--------g~~~~~~~~--~--~-----------~~-~~l 143 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELAL--LGARVVLVEKRIKF--------SRHNVLHLW--P--F-----------TI-HDL 143 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCSSC--------CCCCEEECC--H--H-----------HH-HHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHH--CCCeEEEEEecccc--------CCCCcccCC--h--h-----------HH-HHH
Confidence 356899999999999999999999 79999999976322 233333321 1 0 00 001
Q ss_pred hcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecC-CCCeEEEEEeeccc
Q 011610 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDN-AGRKFLLKVEKRTM 206 (481)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~-~~~~~~V~~~~~~~ 206 (481)
..++..+ + .+ .+.... -..+ ....+.+.|.+.+++.|++|+++++|+++..++ +++.+.|++.+..+
T Consensus 144 ~~~g~~~---~---~~-~~~~~~-~~~~----~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~ 211 (497)
T 2bry_A 144 RALGAKK---F---YG-RFCTGT-LDHI----SIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPP 211 (497)
T ss_dssp HTTTHHH---H---CT-TTTCTT-CCEE----EHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCC
T ss_pred HHcCCcc---c---cc-cccccc-cccC----CHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCC
Confidence 1111110 0 00 000000 0111 246778889999999999999999999998641 12457777632001
Q ss_pred CceEEEEcCeEEEccCCChhH--HHHHHHcCCCcccCCCceeEe-eeCccccccccCce
Q 011610 207 NLVECIEADYLLIASGSSQQG--HRLAAQLGHSIVDPVPSLFTF-KIADSQLTELSGVS 262 (481)
Q Consensus 207 ~~~~~i~ad~VIlAtG~~g~g--~~la~~~G~~i~~~~p~l~~~-~~~~~~~~~l~G~~ 262 (481)
+...++.||.||+|+|+.+.. +...+..|+.+.+..+.++++ ...+.+.+.+.|+.
T Consensus 212 g~~~~i~ad~VV~A~G~~S~~r~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~G~~ 270 (497)
T 2bry_A 212 AQLASYEFDVLISAAGGKFVPEGFTIREMRGKLAIGITANFVNGRTVEETQVPEISGVA 270 (497)
T ss_dssp HHHHTCCBSEEEECCCTTCCCTTCEEEEEECSCCEEEEEEEECCCCHHHHTSCCBCC--
T ss_pred CCEEEEEcCEEEECCCCCcccccccchhhcCceeEeeeeeeeeeccccccchhhcCceE
Confidence 111469999999999976522 111122344444444555544 23333344455553
No 43
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.22 E-value=8.8e-11 Score=118.94 Aligned_cols=163 Identities=17% Similarity=0.139 Sum_probs=93.8
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCCh-hchhhHH
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHK-EFRGSFF 127 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 127 (481)
++||+|||||++|+++|+.|++ .|++|+|+|+.. ++......+ + .. . .+...+.-... .......
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~--~G~~V~l~E~~~~~g~~~~~~~-~---~~-----~--~~~~~lg~~~~~~~~~~~~ 70 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK--YGLKTLMIEKRPEIGSPVRCGE-G---LS-----K--GILNEADIKADRSFIANEV 70 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSTTCSCCSCC-E---EE-----T--HHHHHTTCCCCTTTEEEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCCCCCCccccc-c---cC-----H--HHHHHcCCCCChHHhhhhc
Confidence 4899999999999999999999 799999999764 442111100 0 00 0 11111110000 0000000
Q ss_pred hcCChHHHHHHHHhcCCc-ceeecC--CeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEE-EEEee
Q 011610 128 SLHGPMDTMSWFSDHGVE-LKTEDD--GRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFL-LKVEK 203 (481)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~-~~~~~~--g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~-V~~~~ 203 (481)
... .+....+.. ...... +..+....+...+...|.+.+++.|++|+++++|+++..++ +.+. |++.+
T Consensus 71 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~ 142 (397)
T 3cgv_A 71 KGA------RIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRH 142 (397)
T ss_dssp SEE------EEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEE
T ss_pred ceE------EEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC--CEEEEEEEEE
Confidence 000 000000100 000000 00001112456788899999999999999999999998875 5554 77742
Q ss_pred cccCceEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 204 RTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 204 ~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
.+.+.+++||.||.|+|.++ .+.+.+|...
T Consensus 143 --~~~~~~~~a~~vV~A~G~~s---~~~~~~g~~~ 172 (397)
T 3cgv_A 143 --NNEIVDVRAKMVIAADGFES---EFGRWAGLKS 172 (397)
T ss_dssp --TTEEEEEEEEEEEECCCTTC---HHHHHHTCCT
T ss_pred --CCeEEEEEcCEEEECCCcch---HhHHhcCCCc
Confidence 12257899999999999876 4666677654
No 44
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.22 E-value=1.8e-10 Score=121.96 Aligned_cols=72 Identities=18% Similarity=0.221 Sum_probs=58.2
Q ss_pred ChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCC----eEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcC
Q 011610 160 SSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGR----KFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLG 235 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~----~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G 235 (481)
....+...|.+.+++.|++|+++++|++++.++ + .+.+++.+ .++..+++||.||.|+|+++ .+.+.+|
T Consensus 118 ~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~~~~~v~v~~~~--~~~~~~i~a~~vV~AdG~~S---~vR~~lg 190 (535)
T 3ihg_A 118 SQDKLEPILLAQARKHGGAIRFGTRLLSFRQHD--DDAGAGVTARLAG--PDGEYDLRAGYLVGADGNRS---LVRESLG 190 (535)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSCEEEEEEEEC--GGGCSEEEEEEEE--TTEEEEEEEEEEEECCCTTC---HHHHHTT
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECC--CCccccEEEEEEc--CCCeEEEEeCEEEECCCCcc---hHHHHcC
Confidence 467788899999999999999999999999875 5 67777764 11137899999999999876 5677788
Q ss_pred CCc
Q 011610 236 HSI 238 (481)
Q Consensus 236 ~~i 238 (481)
+..
T Consensus 191 i~~ 193 (535)
T 3ihg_A 191 IGR 193 (535)
T ss_dssp CCE
T ss_pred CCc
Confidence 764
No 45
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.22 E-value=8.1e-11 Score=114.42 Aligned_cols=142 Identities=15% Similarity=0.159 Sum_probs=92.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCC-CCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhH
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAP-KLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~-g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (481)
.++||+|||||++|+++|+.|++ . |.+|+|||+. .++. .+.... .... ....
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~--~~G~~V~viEk~~~~gg--------~~~~~~-~~~~------------~~~~--- 91 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISK--NPNVQVAIIEQSVSPGG--------GAWLGG-QLFS------------AMIV--- 91 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHT--STTSCEEEEESSSSCCT--------TTTCCS-TTCC------------CEEE---
T ss_pred cccCEEEECccHHHHHHHHHHHH--cCCCeEEEEECCCCCCC--------ceecCC-cchH------------HHHc---
Confidence 35899999999999999999998 5 8999999965 4442 111100 0000 0010
Q ss_pred HhcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHh-CCCEEEcCceEEEEEecCCCCeEEEEEeec-
Q 011610 127 FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKH-RGVVLQTGKVVTTASSDNAGRKFLLKVEKR- 204 (481)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~-~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~- 204 (481)
. ....+|+++.|+++... +.+++ ......+...|.+.+.+ .|++++++++|+++..++ +....|.+...
T Consensus 92 -~----~~~~~~l~~~G~~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~-~~v~gv~~~~~~ 162 (284)
T 1rp0_A 92 -R----KPAHLFLDEIGVAYDEQ--DTYVV-VKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-NRVGGVVTNWAL 162 (284)
T ss_dssp -E----TTTHHHHHHHTCCCEEC--SSEEE-ESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEET-TEEEEEEEEEHH
T ss_pred -C----cHHHHHHHHcCCCcccC--CCEEE-ecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecC-CeEEEEEEeccc
Confidence 0 01235677778876543 22332 22456777888888866 699999999999998765 33345665410
Q ss_pred --------ccCceEEEEcCeEEEccCCCh
Q 011610 205 --------TMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 205 --------~~~~~~~i~ad~VIlAtG~~g 225 (481)
..+....+.||.||+|+|+.+
T Consensus 163 ~~~~~~~g~~g~~~~i~ad~VV~AtG~~s 191 (284)
T 1rp0_A 163 VAQNHHTQSCMDPNVMEAKIVVSSCGHDG 191 (284)
T ss_dssp HHTCTTTSSCCCCEEEEEEEEEECCCSSS
T ss_pred cccccCccccCceEEEECCEEEECCCCch
Confidence 001236799999999999754
No 46
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.22 E-value=7.4e-11 Score=126.24 Aligned_cols=153 Identities=20% Similarity=0.250 Sum_probs=94.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
.+||+|||||++|+++|+.|++ .|.+|+|||+...+.. +.|.. .. .....+. ..
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar--~G~~V~LiEr~~~~~~----~~G~~--l~---p~~~~~l---------------~~ 76 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHK--LGHDVTIYERSAFPRY----RVGES--LL---PGTMSIL---------------NR 76 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCSSCC----CCCCB--CC---HHHHHHH---------------HH
T ss_pred CCCEEEECcCHHHHHHHHHHHc--CCCCEEEEcCCCCCCC----ceeee--EC---HHHHHHH---------------HH
Confidence 5899999999999999999999 7999999997654420 00100 00 0000111 11
Q ss_pred CChHHHHHHHHhcCCcce------eecC----------------CeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEE
Q 011610 130 HGPMDTMSWFSDHGVELK------TEDD----------------GRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTT 187 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~------~~~~----------------g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~ 187 (481)
.+..+ .+...+.... .... ...+....+...+...|.+.+++.|++++++++|++
T Consensus 77 lGl~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~ 153 (591)
T 3i3l_A 77 LGLQE---KIDAQNYVKKPSATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTD 153 (591)
T ss_dssp TTCHH---HHHHHCCEEECEEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEE
T ss_pred cCCcH---HHHhcCCcccCCcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEE
Confidence 11111 1111111000 0000 000111235677888999999999999999999999
Q ss_pred EEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCC
Q 011610 188 ASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHS 237 (481)
Q Consensus 188 i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~ 237 (481)
+..++ ++.+.|++.+ .+...+++||.||.|+|..+ .+.+.+|..
T Consensus 154 v~~~~-g~~~~V~~~~--~G~~~~i~AdlVV~AdG~~S---~lr~~lg~~ 197 (591)
T 3i3l_A 154 VDLSD-PDRVVLTVRR--GGESVTVESDFVIDAGGSGG---PISRKLGVR 197 (591)
T ss_dssp EECCS-TTCEEEEEEE--TTEEEEEEESEEEECCGGGC---HHHHHHTCE
T ss_pred EEEcC-CCEEEEEEec--CCceEEEEcCEEEECCCCcc---hhHHHcCCC
Confidence 98764 4678888763 12126899999999999865 355666664
No 47
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.21 E-value=1.6e-10 Score=128.93 Aligned_cols=78 Identities=19% Similarity=0.298 Sum_probs=61.3
Q ss_pred ChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCcc
Q 011610 160 SSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSIV 239 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i~ 239 (481)
++..+...|.+.+++.|++|+++++|++|..++ +..+.|++.+ + +++||.||+|+|++. ..+++.+|+++
T Consensus 149 ~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~-~~v~~V~t~~-----G-~i~Ad~VV~AaG~~s--~~l~~~~g~~~- 218 (830)
T 1pj5_A 149 SAARAVQLLIKRTESAGVTYRGSTTVTGIEQSG-GRVTGVQTAD-----G-VIPADIVVSCAGFWG--AKIGAMIGMAV- 218 (830)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETT-----E-EEECSEEEECCGGGH--HHHHHTTTCCC-
T ss_pred cHHHHHHHHHHHHHHcCCEEECCceEEEEEEeC-CEEEEEEECC-----c-EEECCEEEECCccch--HHHHHHhCCCc-
Confidence 567889999999999999999999999998765 3344677764 3 799999999999876 56777788764
Q ss_pred cCCCceeE
Q 011610 240 DPVPSLFT 247 (481)
Q Consensus 240 ~~~p~l~~ 247 (481)
|+.|...+
T Consensus 219 pl~p~~g~ 226 (830)
T 1pj5_A 219 PLLPLAHQ 226 (830)
T ss_dssp CCEEEEEE
T ss_pred cceeceeE
Confidence 55554433
No 48
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.18 E-value=2.4e-11 Score=125.75 Aligned_cols=69 Identities=22% Similarity=0.264 Sum_probs=55.1
Q ss_pred ChHHHHHHHHHHHHhCCCEEEcCceEEEEEe---------------cCCCCeEEEEEeecccCceEEE--EcCeEEEccC
Q 011610 160 SSSSVIDCLLTEAKHRGVVLQTGKVVTTASS---------------DNAGRKFLLKVEKRTMNLVECI--EADYLLIASG 222 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~---------------~~~~~~~~V~~~~~~~~~~~~i--~ad~VIlAtG 222 (481)
+...+...|.+.+++.|++|+++++|++|.. ++ ++.+.|++.+ + ++ .||.||+|+|
T Consensus 179 ~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~-~~v~~V~t~~-----g-~i~~~Ad~VV~AtG 251 (448)
T 3axb_A 179 DAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE-ARASAAVLSD-----G-TRVEVGEKLVVAAG 251 (448)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC-EEEEEEEETT-----S-CEEEEEEEEEECCG
T ss_pred cHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC-CceEEEEeCC-----C-EEeecCCEEEECCC
Confidence 5678899999999999999999999999987 43 2335677664 4 68 9999999999
Q ss_pred CChhHHHHHHHcCCC
Q 011610 223 SSQQGHRLAAQLGHS 237 (481)
Q Consensus 223 ~~g~g~~la~~~G~~ 237 (481)
++. ..++..+|..
T Consensus 252 ~~s--~~l~~~~g~~ 264 (448)
T 3axb_A 252 VWS--NRLLNPLGID 264 (448)
T ss_dssp GGH--HHHHGGGTCC
T ss_pred cCH--HHHHHHcCCC
Confidence 875 3577777765
No 49
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.18 E-value=1.4e-10 Score=114.98 Aligned_cols=145 Identities=19% Similarity=0.250 Sum_probs=95.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHH
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (481)
..+||+|||||++|+++|+.|++..+|++|+|||+. .++ +.|. .+ .. .+. ....
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~G--------Gg~~-~~-g~--------~~~---~~~~---- 132 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPG--------GGAW-LG-GQ--------LFS---AMVM---- 132 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCC--------TTTT-CC-BT--------TCC---CEEE----
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccC--------Cccc-cC-Cc--------cch---hhhc----
Confidence 468999999999999999999983238999999976 444 2221 11 00 000 0010
Q ss_pred hcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHh-CCCEEEcCceEEEEEecCCC------------
Q 011610 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKH-RGVVLQTGKVVTTASSDNAG------------ 194 (481)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~-~Gv~i~~~~~V~~i~~~~~~------------ 194 (481)
. .+...|+++.|+++... +.++ ...+..++.+.|.+.+.+ .|+++++++.|.++..++ +
T Consensus 133 -~---~~~~~~L~~~Gv~~~~~--G~~~-~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~-d~~~~~~~~~~g~ 204 (344)
T 3jsk_A 133 -R---KPADVFLDEVGVPYEDE--GDYV-VVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRK-HHAESSSSSDDGE 204 (344)
T ss_dssp -E---TTTHHHHHHHTCCCEEC--SSEE-EESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEE-C------------
T ss_pred -c---hHHHHHHHHcCCccccc--CCeE-EEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecC-Ccccccccccccc
Confidence 1 12356778888877543 3333 234567888999999888 599999999999998754 2
Q ss_pred -------CeEEEEEeec---ccC------ceEEEEcCeEEEccCCChh
Q 011610 195 -------RKFLLKVEKR---TMN------LVECIEADYLLIASGSSQQ 226 (481)
Q Consensus 195 -------~~~~V~~~~~---~~~------~~~~i~ad~VIlAtG~~g~ 226 (481)
...+|.+... ..+ ...+|+|+.||+|||..+.
T Consensus 205 ~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 205 AEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGP 252 (344)
T ss_dssp ----CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSS
T ss_pred cccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCch
Confidence 1234544310 011 2368999999999998754
No 50
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.18 E-value=1.6e-10 Score=121.78 Aligned_cols=147 Identities=19% Similarity=0.206 Sum_probs=87.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
.++||+|||||++|+++|+.|++ .|++|+|||+...... +.|.. ..+. .. ...+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~--~G~~V~liE~~~~~~~----~~g~~------~~~~-~~------------~~~l~ 60 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAM--RGHRVLLLEREAFPRH----QIGES------LLPA-TV------------HGICA 60 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT--TTCCEEEECSSCSSCC----CSCCB------CCHH-HH------------TTHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHHh--CCCCEEEEccCCCCCC----CCCcc------cCcc-hH------------HHHHH
Confidence 45899999999999999999999 7999999997654320 00100 0000 00 00001
Q ss_pred cCChHHHHHHHHhcCCccee---------------e-----cCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEE
Q 011610 129 LHGPMDTMSWFSDHGVELKT---------------E-----DDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTA 188 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~---------------~-----~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i 188 (481)
..+.. +.+...+..... . .....+........+...|.+.+++.|++|+++++|+++
T Consensus 61 ~lgl~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v 137 (512)
T 3e1t_A 61 MLGLT---DEMKRAGFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDV 137 (512)
T ss_dssp HTTCH---HHHHTTTCCEECEEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEE
T ss_pred HhCcH---HHHHHcCCccccCceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEE
Confidence 11100 011111111100 0 000011112456788899999999999999999999999
Q ss_pred EecCCCCeEEEEEeecccCceEEEEcCeEEEccCCCh
Q 011610 189 SSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 189 ~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g 225 (481)
..++ +....|++.. .++...+++||.||.|+|..+
T Consensus 138 ~~~~-~~v~gv~~~~-~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 138 LFEG-ERAVGVRYRN-TEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp EEET-TEEEEEEEEC-SSSCEEEEEEEEEEECCCTTC
T ss_pred EEEC-CEEEEEEEEe-CCCCEEEEEcCEEEECCCcch
Confidence 9875 3333455542 112225899999999999865
No 51
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.18 E-value=1.2e-11 Score=126.20 Aligned_cols=146 Identities=21% Similarity=0.223 Sum_probs=84.6
Q ss_pred CCCCCCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhch
Q 011610 44 LTHTSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFR 123 (481)
Q Consensus 44 ~~~~~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~ 123 (481)
++.....+||+|||||++|+++|+.|++ .|++|+|||+....+. .|.+ ..+.. ........+
T Consensus 17 ~~~~~~~~dV~IVGaG~aGl~~A~~La~--~G~~V~v~E~~~~~~~---~~~~-~~l~~----~~~~~l~~l-------- 78 (407)
T 3rp8_A 17 NLYFQGHMKAIVIGAGIGGLSAAVALKQ--SGIDCDVYEAVKEIKP---VGAA-ISVWP----NGVKCMAHL-------- 78 (407)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSCC-------CE-EEECH----HHHHHHHHT--------
T ss_pred cccCCCCCEEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCCCCC---cCee-EEECH----HHHHHHHHC--------
Confidence 3445567999999999999999999999 7999999997633210 0000 11110 000111111
Q ss_pred hhHHhcCChHHHHHHHHhcCCcc-----eeecCCe---eee------------cCCChHHHHHHHHHHHHhCCCEEEcCc
Q 011610 124 GSFFSLHGPMDTMSWFSDHGVEL-----KTEDDGR---VFP------------VSDSSSSVIDCLLTEAKHRGVVLQTGK 183 (481)
Q Consensus 124 ~~~l~~~~~~~~~~~~~~~Gi~~-----~~~~~g~---~~p------------~~~~a~~~~~~l~~~~~~~Gv~i~~~~ 183 (481)
+..+ .+...+.+. .....+. .++ .......+.+.|.+.+.+ ++|++++
T Consensus 79 -------g~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~ 146 (407)
T 3rp8_A 79 -------GMGD---IMETFGGPLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGK 146 (407)
T ss_dssp -------TCHH---HHHHHSCCCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESC
T ss_pred -------CCHH---HHHhhcCCCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECC
Confidence 1000 001111100 0000010 000 011346777888888876 8999999
Q ss_pred eEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChh
Q 011610 184 VVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQ 226 (481)
Q Consensus 184 ~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~ 226 (481)
+|++++.++ +.+.|++.+ +.+++||.||.|+|.++.
T Consensus 147 ~v~~i~~~~--~~v~v~~~~-----g~~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 147 RVTRCEEDA--DGVTVWFTD-----GSSASGDLLIAADGSHSA 182 (407)
T ss_dssp CEEEEEEET--TEEEEEETT-----SCEEEESEEEECCCTTCS
T ss_pred EEEEEEecC--CcEEEEEcC-----CCEEeeCEEEECCCcChH
Confidence 999999875 678888776 568999999999998764
No 52
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.16 E-value=1e-10 Score=114.63 Aligned_cols=113 Identities=15% Similarity=0.156 Sum_probs=71.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
++|||+||||||||++||+.|++ .|++|+|+|++.++ |.+ +... + .|... .
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar--~g~~v~lie~~~~g--------g~~--~~~~--~------~~~~~---------~ 55 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGR--ARKQIALFDNNTNR--------NRV--TQNS--H------GFITR---------D 55 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSCCG--------GGG--SSCB--C------CSTTC---------T
T ss_pred CCcCEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCCC--------Cee--eeec--C------CccCC---------C
Confidence 46899999999999999999999 79999999987665 221 1000 0 01000 0
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
... ...+.+.+.+.+.+.+...+.+..+..+...+ ++.+.|.+.+
T Consensus 56 ~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~----- 100 (304)
T 4fk1_A 56 GIK-----------------------------PEEFKEIGLNEVMKYPSVHYYEKTVVMITKQS-TGLFEIVTKD----- 100 (304)
T ss_dssp TBC-----------------------------HHHHHHHHHHHHTTSTTEEEEECCEEEEEECT-TSCEEEEETT-----
T ss_pred CCC-----------------------------HHHHHHHHHHHHHhcCCEEEEeeEEEEeeecC-CCcEEEEECC-----
Confidence 001 12222333334444444444455666666554 4667888776
Q ss_pred eEEEEcCeEEEccCCCh
Q 011610 209 VECIEADYLLIASGSSQ 225 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g 225 (481)
+.++.+|+||+|||+.+
T Consensus 101 g~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 101 HTKYLAERVLLATGMQE 117 (304)
T ss_dssp CCEEEEEEEEECCCCEE
T ss_pred CCEEEeCEEEEccCCcc
Confidence 67899999999999754
No 53
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.16 E-value=3e-10 Score=113.14 Aligned_cols=148 Identities=16% Similarity=0.213 Sum_probs=84.3
Q ss_pred CeEEEECCchHHHHHHHHHhc-cCCCCcEEEEeCC-CCCCceEEe---cCCceeeccCCCcchhHHhhccCCCChhchhh
Q 011610 51 ELLVVVGGGAAGVYGAIRAKT-VAPKLNVVIIEKG-KPLSKVKIS---GGGRCNVTNGHCADKMILAGHYPRGHKEFRGS 125 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~-~~~g~~V~llE~~-~~g~k~~~s---G~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (481)
+||+|||||++|+++|+.|++ ...|++|+|+|+. .+|+..... ++..+.+... ..|......+..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g---------~~~~~~~~~~~~- 71 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLG---------AQYITCTPHYAK- 71 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESS---------CCCEEECSSHHH-
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecC---------CceEEcCchHHH-
Confidence 699999999999999999998 2247999999965 444221110 0000111000 001000000000
Q ss_pred HHhcCChHHHHHHHHhcCCccee---------ecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCe
Q 011610 126 FFSLHGPMDTMSWFSDHGVELKT---------EDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRK 196 (481)
Q Consensus 126 ~l~~~~~~~~~~~~~~~Gi~~~~---------~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~ 196 (481)
.+ .+..+.+...|+.... .+....|........+.+.|.+.+ |++|+++++|++|..++ +.
T Consensus 72 ---~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~--~~ 141 (342)
T 3qj4_A 72 ---KH--QRFYDELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKES---GAEVYFRHRVTQINLRD--DK 141 (342)
T ss_dssp ---HT--HHHHHHHHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHH---TCEEESSCCEEEEEECS--SS
T ss_pred ---HH--HHHHHHHHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhc---CCEEEeCCEEEEEEEcC--CE
Confidence 00 1122222223321110 011223434455566777766554 89999999999999875 66
Q ss_pred EEEEEeecccCceEEEEcCeEEEccCC
Q 011610 197 FLLKVEKRTMNLVECIEADYLLIASGS 223 (481)
Q Consensus 197 ~~V~~~~~~~~~~~~i~ad~VIlAtG~ 223 (481)
|.|++.+ +..+.+|.||+|+..
T Consensus 142 ~~v~~~~-----g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 142 WEVSKQT-----GSPEQFDLIVLTMPV 163 (342)
T ss_dssp EEEEESS-----SCCEEESEEEECSCH
T ss_pred EEEEECC-----CCEEEcCEEEECCCH
Confidence 8888875 556899999999973
No 54
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.15 E-value=2.3e-10 Score=112.12 Aligned_cols=112 Identities=17% Similarity=0.235 Sum_probs=80.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
+++||+|||||++|+++|+.|++ .|++|+|+|+. +| |.+..... . ..++. +
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~-~g--------g~~~~~~~--~------~~~~~----~------ 64 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSAR--YMLKTLVIGET-PG--------GQLTEAGI--V------DDYLG----L------ 64 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-TT--------GGGGGCCE--E------CCSTT----S------
T ss_pred CccCEEEECccHHHHHHHHHHHH--CCCcEEEEecc-CC--------Ceeccccc--c------cccCC----C------
Confidence 46899999999999999999999 78999999987 55 33322100 0 00000 0
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
. . .....+.+.+.+.+++.|+++++ ++|.++..++ +.+.|.+.+
T Consensus 65 --~---------------------~-----~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~~~~----- 108 (323)
T 3f8d_A 65 --I---------------------E-----IQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRG--DEFVVKTKR----- 108 (323)
T ss_dssp --T---------------------T-----EEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC----CEEEEESS-----
T ss_pred --C---------------------C-----CCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecC--CEEEEEECC-----
Confidence 0 0 11345667777788888999999 8999998764 668888775
Q ss_pred eEEEEcCeEEEccCCCh
Q 011610 209 VECIEADYLLIASGSSQ 225 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g 225 (481)
+..+.+|+||+|||+.+
T Consensus 109 g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 109 KGEFKADSVILGIGVKR 125 (323)
T ss_dssp SCEEEEEEEEECCCCEE
T ss_pred CCEEEcCEEEECcCCCC
Confidence 57899999999999753
No 55
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.14 E-value=5.5e-11 Score=120.76 Aligned_cols=111 Identities=21% Similarity=0.226 Sum_probs=70.5
Q ss_pred CCCCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhh
Q 011610 46 HTSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGS 125 (481)
Q Consensus 46 ~~~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (481)
+..++.+|+|||||+||++||..|+. ++.+|+|||+..... ..++. +. .
T Consensus 5 ~~~~~~~~vIvGgG~AGl~aA~~L~~--~~~~itlie~~~~~~------y~~~~----------------------l~-~ 53 (385)
T 3klj_A 5 HHHKSTKILILGAGPAGFSAAKAALG--KCDDITMINSEKYLP------YYRPR----------------------LN-E 53 (385)
T ss_dssp ---CBCSEEEECCSHHHHHHHHHHTT--TCSCEEEECSSSSCC------BCGGG----------------------HH-H
T ss_pred cccCCCCEEEEcCcHHHHHHHHHHhC--CCCEEEEEECCCCCC------cccCh----------------------hh-H
Confidence 34467899999999999999999965 789999999653210 00110 00 0
Q ss_pred HHh-cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeec
Q 011610 126 FFS-LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKR 204 (481)
Q Consensus 126 ~l~-~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~ 204 (481)
.+. ....+ .++ ....+.+++.|++++++++|++|..++ + .|++++
T Consensus 54 ~l~g~~~~~-------------------~l~----------~~~~~~~~~~~i~~~~~~~V~~id~~~--~--~v~~~~- 99 (385)
T 3klj_A 54 IIAKNKSID-------------------DIL----------IKKNDWYEKNNIKVITSEFATSIDPNN--K--LVTLKS- 99 (385)
T ss_dssp HHHSCCCGG-------------------GTB----------SSCHHHHHHTTCEEECSCCEEEEETTT--T--EEEETT-
T ss_pred HHcCCCCHH-------------------Hcc----------CCCHHHHHHCCCEEEeCCEEEEEECCC--C--EEEECC-
Confidence 000 00000 000 001122346799999999999998654 3 466665
Q ss_pred ccCceEEEEcCeEEEccCCCh
Q 011610 205 TMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 205 ~~~~~~~i~ad~VIlAtG~~g 225 (481)
+.++.+|+||+|||+.+
T Consensus 100 ----g~~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 100 ----GEKIKYEKLIIASGSIA 116 (385)
T ss_dssp ----SCEEECSEEEECCCEEE
T ss_pred ----CCEEECCEEEEecCCCc
Confidence 67899999999999754
No 56
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.14 E-value=4.8e-10 Score=114.01 Aligned_cols=152 Identities=14% Similarity=0.155 Sum_probs=92.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
.++||+|||||++|+++|+.|++ .|.+|+|+|+....+. .+.+ ..+.. .......
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~--~G~~V~viE~~~~~~~---~~~~-~~l~~----~~~~~l~--------------- 59 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGR--QGHRVVVVEQARRERA---INGA-DLLKP----AGIRVVE--------------- 59 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSCCC------CCC-CEECH----HHHHHHH---------------
T ss_pred CcCCEEEECcCHHHHHHHHHHHh--CCCcEEEEeCCCCCCc---cCce-eeECc----hHHHHHH---------------
Confidence 35899999999999999999999 7999999996532210 0001 00000 0001111
Q ss_pred cCChHHHHHHHHhcCCcce----eecCCe---eee----------cCCChHHHHHHHHHHHHhC-CCEEEcCceEEEEEe
Q 011610 129 LHGPMDTMSWFSDHGVELK----TEDDGR---VFP----------VSDSSSSVIDCLLTEAKHR-GVVLQTGKVVTTASS 190 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~----~~~~g~---~~p----------~~~~a~~~~~~l~~~~~~~-Gv~i~~~~~V~~i~~ 190 (481)
..+..+ -+...+.... ....+. .++ .......+.+.|.+.+++. |++|+++++|++++.
T Consensus 60 ~~g~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~ 136 (399)
T 2x3n_A 60 AAGLLA---EVTRRGGRVRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQR 136 (399)
T ss_dssp HTTCHH---HHHHTTCEEECEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEE
T ss_pred HcCcHH---HHHHhCCCcceeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEE
Confidence 111101 0111111100 000110 011 1234568888999999988 999999999999988
Q ss_pred cCCCCeE--EEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 191 DNAGRKF--LLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 191 ~~~~~~~--~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
++ +.+ .|++.+ +.+++||.||.|+|.++. +.+.+|...
T Consensus 137 ~~--~~v~g~v~~~~-----g~~~~ad~vV~AdG~~s~---vr~~lg~~~ 176 (399)
T 2x3n_A 137 DE--RHAIDQVRLND-----GRVLRPRVVVGADGIASY---VRRRLLDID 176 (399)
T ss_dssp CT--TSCEEEEEETT-----SCEEEEEEEEECCCTTCH---HHHHTSCCC
T ss_pred cC--CceEEEEEECC-----CCEEECCEEEECCCCChH---HHHHhCCCc
Confidence 75 455 777765 558999999999998763 455677654
No 57
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.14 E-value=3e-10 Score=119.43 Aligned_cols=73 Identities=14% Similarity=0.112 Sum_probs=55.5
Q ss_pred ChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHH-cCC
Q 011610 160 SSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQ-LGH 236 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~-~G~ 236 (481)
+...++..|.+.+.+.|++++++++|+++..++ +.+.|++.+..++...+++||.||+|+|.+.. .++.. ++.
T Consensus 147 ~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~--~l~~~~l~~ 220 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWVK--QFFDDGMHL 220 (501)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGHH--HHHHHHTCC
T ss_pred cHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhHH--HHHHHhccC
Confidence 467788999999999999999999999998864 67788775311222247999999999998763 45554 553
No 58
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.13 E-value=3.8e-10 Score=111.67 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=32.5
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPL 87 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g 87 (481)
++||+|||||++|+++|+.|++ .|.+|+|||+. .++
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~--~G~~V~vlE~~~~~g 38 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTA--AGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSC
T ss_pred CceEEEECCcHHHHHHHHHHHH--CCCcEEEEECCCCCc
Confidence 5799999999999999999999 79999999965 454
No 59
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.12 E-value=2.3e-10 Score=112.01 Aligned_cols=113 Identities=25% Similarity=0.378 Sum_probs=80.8
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
++||+|||||++|+++|+.|++ .|. +|+|+|++.+| |.|..... .. .+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~--~g~~~v~lie~~~~g--------g~~~~~~~--~~------~~~------------ 50 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATR--GGVKNAVLFEKGMPG--------GQITGSSE--IE------NYP------------ 50 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCSSEEEECSSSTT--------CGGGGCSC--BC------CST------------
T ss_pred CceEEEECccHHHHHHHHHHHH--CCCCcEEEEcCCCCC--------cccccccc--cc------cCC------------
Confidence 3799999999999999999999 789 99999987555 44421110 00 000
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
+ +|.......+.+.+.+.+++.|++++. ++|.++..++ +.+.|.+.+
T Consensus 51 --------------~-----------~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~~~~----- 97 (311)
T 2q0l_A 51 --------------G-----------VKEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKD--SHFVILAED----- 97 (311)
T ss_dssp --------------T-----------CCSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEET--TEEEEEETT-----
T ss_pred --------------C-----------CcccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcC--CEEEEEEcC-----
Confidence 0 000113355667777778888999988 7999998765 567777654
Q ss_pred eEEEEcCeEEEccCCCh
Q 011610 209 VECIEADYLLIASGSSQ 225 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g 225 (481)
+..+.+|+||+|||+.+
T Consensus 98 g~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 98 GKTFEAKSVIIATGGSP 114 (311)
T ss_dssp SCEEEEEEEEECCCEEE
T ss_pred CCEEECCEEEECCCCCC
Confidence 56799999999999754
No 60
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.12 E-value=8.9e-10 Score=117.59 Aligned_cols=75 Identities=12% Similarity=0.035 Sum_probs=55.8
Q ss_pred ChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCC
Q 011610 160 SSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHS 237 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~ 237 (481)
....++..+.+.+.+.|++|+++++|+++..++ +..+.|++.+..++.+.+++||.||+|+|.+. ..+++..|..
T Consensus 186 ~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~-~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws--~~l~~~~g~~ 260 (571)
T 2rgh_A 186 NDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG-DQIVGVKARDLLTDEVIEIKAKLVINTSGPWV--DKVRNLNFTR 260 (571)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEETTTCCEEEEEBSCEEECCGGGH--HHHHTTCCSS
T ss_pred chHHHHHHHHHHHHHcCCeEEeccEEEEEEEeC-CEEEEEEEEEcCCCCEEEEEcCEEEECCChhH--HHHHHhhccC
Confidence 456777888889999999999999999999875 44466776532123345799999999999875 3455555643
No 61
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.11 E-value=9.5e-11 Score=119.77 Aligned_cols=69 Identities=19% Similarity=0.192 Sum_probs=50.4
Q ss_pred ChHHHHHHHHHHHHhCCCEEEcCceEE---------EEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHH
Q 011610 160 SSSSVIDCLLTEAKHRGVVLQTGKVVT---------TASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRL 230 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~Gv~i~~~~~V~---------~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~l 230 (481)
+...+...|.+.+++.|++++++++|+ ++..++ +.+.|++.+ ..+.||.||+|+|++. ..+
T Consensus 170 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~--~~v~v~~~~------g~i~a~~VV~A~G~~s--~~l 239 (405)
T 3c4n_A 170 RPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN--THQIVVHET------RQIRAGVIIVAAGAAG--PAL 239 (405)
T ss_dssp CHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCC------EEEEEEEEEECCGGGH--HHH
T ss_pred cHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC--CeEEEEECC------cEEECCEEEECCCccH--HHH
Confidence 356788999999999999999999999 887654 455666553 3799999999999875 356
Q ss_pred HH-HcCCCc
Q 011610 231 AA-QLGHSI 238 (481)
Q Consensus 231 a~-~~G~~i 238 (481)
++ .+|..+
T Consensus 240 ~~~~~g~~~ 248 (405)
T 3c4n_A 240 VEQGLGLHT 248 (405)
T ss_dssp HHHHHCCCC
T ss_pred HHHhcCCCC
Confidence 66 777653
No 62
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.11 E-value=1.5e-10 Score=113.50 Aligned_cols=119 Identities=19% Similarity=0.276 Sum_probs=77.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
..|||+||||||||++||+.|++ .|++|+|+|+...+ |.| .+ .+.+.......|+
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~--~g~~v~liE~~~~g--------g~~--~~-G~~~~~~~i~~~~------------ 57 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGR--SSLKPVMYEGFMAG--------GVA--AG-GQLTTTTIIENFP------------ 57 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--TTCCCEEECCSSGG--------GCC--TT-CGGGGSSEECCST------------
T ss_pred CCCcEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCCC--------Ccc--cC-CCcCChHHhhhcc------------
Confidence 46999999999999999999999 79999999987654 222 11 1111000000000
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
| ||......++...+.+.+++.++++... .|....... +.+.+.+.+
T Consensus 58 --------------g-----------~~~~i~~~~l~~~~~~~~~~~~~~~~~~-~v~~~~~~~--~~~~~~~~~----- 104 (314)
T 4a5l_A 58 --------------G-----------FPNGIDGNELMMNMRTQSEKYGTTIITE-TIDHVDFST--QPFKLFTEE----- 104 (314)
T ss_dssp --------------T-----------CTTCEEHHHHHHHHHHHHHHTTCEEECC-CEEEEECSS--SSEEEEETT-----
T ss_pred --------------C-----------CcccCCHHHHHHHHHHHHhhcCcEEEEe-EEEEeecCC--CceEEEECC-----
Confidence 0 0111123456667777788889988765 455555543 456666654
Q ss_pred eEEEEcCeEEEccCCCh
Q 011610 209 VECIEADYLLIASGSSQ 225 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g 225 (481)
+.++.+|+||+|||+.+
T Consensus 105 ~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 105 GKEVLTKSVIIATGATA 121 (314)
T ss_dssp CCEEEEEEEEECCCEEE
T ss_pred CeEEEEeEEEEcccccc
Confidence 67899999999999754
No 63
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.10 E-value=2.3e-10 Score=116.05 Aligned_cols=60 Identities=13% Similarity=0.149 Sum_probs=47.8
Q ss_pred ChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEE-eecccCceE--EEEcCeEEEccCCCh
Q 011610 160 SSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKV-EKRTMNLVE--CIEADYLLIASGSSQ 225 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~-~~~~~~~~~--~i~ad~VIlAtG~~g 225 (481)
....+.+.|.+.+.+.|++|+++++|+++..++ ++.+.|++ .+ +. +++||.||.|+|..+
T Consensus 101 ~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~-~~~~~v~~~~~-----g~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 101 GQTEVTRDLMEAREACGATTVYQAAEVRLHDLQ-GERPYVTFERD-----GERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSCEEEEEECTT-SSSCEEEEEET-----TEEEEEECSEEEECCCTTC
T ss_pred chHHHHHHHHHHHHhcCCeEEeceeEEEEEEec-CCceEEEEecC-----CcEEEEEeCEEEECCCCCc
Confidence 345677888888888899999999999998753 34566776 43 33 799999999999865
No 64
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.09 E-value=1.7e-09 Score=110.72 Aligned_cols=64 Identities=22% Similarity=0.257 Sum_probs=50.9
Q ss_pred eeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeE-EEEEeecccCceEEEEcCeEEEccCCCh
Q 011610 153 RVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKF-LLKVEKRTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 153 ~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~-~V~~~~~~~~~~~~i~ad~VIlAtG~~g 225 (481)
..+|. .....+.+.|.+.++++|++|+++++|++|..++ +.+ .|+++ +.++.||.||+|+|.+.
T Consensus 188 ~~~~~-gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~~~gv~~~------g~~~~ad~VV~a~~~~~ 252 (425)
T 3ka7_A 188 TGIPE-GGCKGIIDALETVISANGGKIHTGQEVSKILIEN--GKAAGIIAD------DRIHDADLVISNLGHAA 252 (425)
T ss_dssp CEEET-TSHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEET------TEEEECSEEEECSCHHH
T ss_pred ccccC-CCHHHHHHHHHHHHHHcCCEEEECCceeEEEEEC--CEEEEEEEC------CEEEECCEEEECCCHHH
Confidence 34442 3457789999999999999999999999999875 445 47665 56899999999998643
No 65
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.09 E-value=3.9e-10 Score=110.93 Aligned_cols=113 Identities=21% Similarity=0.299 Sum_probs=80.0
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHH
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (481)
.+.+||+|||||++|+++|+.|++ .|++|+|+|+..+| |.|..... .. .++. +
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~g--------g~~~~~~~--~~------~~~~----~----- 66 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAAR--SGFSVAILDKAVAG--------GLTAEAPL--VE------NYLG----F----- 66 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSTT--------GGGGGCSC--BC------CBTT----B-----
T ss_pred cCCCcEEEECcCHHHHHHHHHHHh--CCCcEEEEeCCCCC--------ccccccch--hh------hcCC----C-----
Confidence 356899999999999999999999 78999999986655 34422110 00 0000 0
Q ss_pred hcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccC
Q 011610 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMN 207 (481)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~ 207 (481)
.......+...+.+.+++.|++++. .+|.++..++ +.+.|.++
T Consensus 67 -----------------------------~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~~~----- 109 (319)
T 3cty_A 67 -----------------------------KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQ--GGFDIETN----- 109 (319)
T ss_dssp -----------------------------SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEET--TEEEEEES-----
T ss_pred -----------------------------cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeC--CEEEEEEC-----
Confidence 0012234566677778888999988 7899998764 56777664
Q ss_pred ceEEEEcCeEEEccCCCh
Q 011610 208 LVECIEADYLLIASGSSQ 225 (481)
Q Consensus 208 ~~~~i~ad~VIlAtG~~g 225 (481)
+.++.+|+||+|||+.+
T Consensus 110 -~~~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 110 -DDTYHAKYVIITTGTTH 126 (319)
T ss_dssp -SSEEEEEEEEECCCEEE
T ss_pred -CCEEEeCEEEECCCCCc
Confidence 45799999999999754
No 66
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.09 E-value=6e-10 Score=109.76 Aligned_cols=145 Identities=17% Similarity=0.212 Sum_probs=94.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHH
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (481)
..+||+|||||++|+++|+.|++.++|++|+|+|+. .+|. +.+. . . . .+. ....
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~gg-------g~~~--~-g--~------~~~---~~~~---- 118 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG-------GSWL--G-G--Q------LFS---AMVM---- 118 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT-------TTTC--C-G--G------GCC---CEEE----
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccc-------cccc--c-C--c------ccc---hhhh----
Confidence 457999999999999999999984338999999965 4441 2110 0 0 0 010 0010
Q ss_pred hcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhC-CCEEEcCceEEEEEecC--C-C--CeEEEEE
Q 011610 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHR-GVVLQTGKVVTTASSDN--A-G--RKFLLKV 201 (481)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~-Gv~i~~~~~V~~i~~~~--~-~--~~~~V~~ 201 (481)
. .+...++.+.|+.+... +.++. ..++..+...|.+.+.+. |++++.+++|.++..++ + + ...+|.+
T Consensus 119 ~----~~~~~~L~~~Gv~~~~~--g~~~~-~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv 191 (326)
T 2gjc_A 119 R----KPAHLFLQELEIPYEDE--GDYVV-VKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVT 191 (326)
T ss_dssp E----TTTHHHHHHTTCCCEEC--SSEEE-ESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEE
T ss_pred h----hHHHHHHHhhCcccccC--CCeEE-EcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEe
Confidence 1 12356777888877644 33332 345678888999988885 99999999999998763 1 1 3345655
Q ss_pred eec---c------cCceEEEEc---------------CeEEEccCCCh
Q 011610 202 EKR---T------MNLVECIEA---------------DYLLIASGSSQ 225 (481)
Q Consensus 202 ~~~---~------~~~~~~i~a---------------d~VIlAtG~~g 225 (481)
... . .....++.| +.||.|||.++
T Consensus 192 ~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~ 239 (326)
T 2gjc_A 192 NWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDG 239 (326)
T ss_dssp EEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC-
T ss_pred cceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCc
Confidence 310 0 012367999 99999999764
No 67
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.09 E-value=4.3e-10 Score=110.97 Aligned_cols=115 Identities=22% Similarity=0.338 Sum_probs=80.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
.++||+|||||++|+++|+.|++ .|++|+|+|+..+| |.|..... . ..|.. +
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~g--------g~~~~~~~--~------~~~~~----~------ 58 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGR--AQLSTLILEKGMPG--------GQIAWSEE--V------ENFPG----F------ 58 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTT--------GGGGGCSC--B------CCSTT----C------
T ss_pred ccCCEEEECCCHHHHHHHHHHHH--cCCcEEEEeCCCCC--------cccccccc--c------ccCCC----C------
Confidence 46899999999999999999999 78999999987655 44422110 0 00000 0
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEec--CCCCeEEEEEeeccc
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSD--NAGRKFLLKVEKRTM 206 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~--~~~~~~~V~~~~~~~ 206 (481)
|.......+...+.+.+++.|++++. ++|.++..+ + +..+.|.+.+
T Consensus 59 ---------------------------~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~-~~~~~v~~~~--- 106 (325)
T 2q7v_A 59 ---------------------------PEPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATS-HPYPFTVRGY--- 106 (325)
T ss_dssp ---------------------------SSCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTS-SSCCEEEEES---
T ss_pred ---------------------------CCCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCC-CceEEEEECC---
Confidence 00012345566777778889999987 689999876 3 2226676665
Q ss_pred CceEEEEcCeEEEccCCCh
Q 011610 207 NLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 207 ~~~~~i~ad~VIlAtG~~g 225 (481)
+.++.+|+||+|||+.+
T Consensus 107 --g~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 107 --NGEYRAKAVILATGADP 123 (325)
T ss_dssp --SCEEEEEEEEECCCEEE
T ss_pred --CCEEEeCEEEECcCCCc
Confidence 56899999999999754
No 68
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.07 E-value=1e-09 Score=98.79 Aligned_cols=119 Identities=24% Similarity=0.367 Sum_probs=86.0
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
++||+|||||++|+.+|..|++ .|.+|+|+|+.. .. .+.... ..|.
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~--~g~~v~lie~~~~~~-------------~~~~~~------~~~~------------ 47 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLAR--AGLKVLVLDGGRSKV-------------KGVSRV------PNYP------------ 47 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSCCTT-------------TTCSCC------CCST------------
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCCcc-------------cCchhh------hccC------------
Confidence 3799999999999999999999 789999999653 11 000000 0000
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
+ +|.......+.+.+.+.+++.|++++++ +|++++.++ +.+.|++++
T Consensus 48 --------------~-----------~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~--~~~~v~~~~----- 94 (180)
T 2ywl_A 48 --------------G-----------LLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMG--GVFEVETEE----- 94 (180)
T ss_dssp --------------T-----------CTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECS--SSEEEECSS-----
T ss_pred --------------C-----------CcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcC--CEEEEEECC-----
Confidence 0 0111234567788888899999999999 999998765 557777764
Q ss_pred eEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 209 VECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
+ ++.+|.||+|+|..+ .+++.+|+++
T Consensus 95 g-~i~ad~vI~A~G~~~---~~~~~~g~~~ 120 (180)
T 2ywl_A 95 G-VEKAERLLLCTHKDP---TLPSLLGLTR 120 (180)
T ss_dssp C-EEEEEEEEECCTTCC---HHHHHHTCCE
T ss_pred C-EEEECEEEECCCCCC---CccccCCCCc
Confidence 4 799999999999886 3566777653
No 69
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.06 E-value=4.6e-10 Score=110.87 Aligned_cols=126 Identities=20% Similarity=0.309 Sum_probs=81.3
Q ss_pred CCCCCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchh
Q 011610 45 THTSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRG 124 (481)
Q Consensus 45 ~~~~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (481)
+..++++||+|||||++|+++|+.|++ .|++|+|||+...... .-+|.+..... . ..|+.
T Consensus 17 ~~~~~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~vie~~~~~~~---~~gg~~~~~~~--~------~~~~~------- 76 (338)
T 3itj_A 17 RGSHVHNKVTIIGSGPAAHTAAIYLAR--AEIKPILYEGMMANGI---AAGGQLTTTTE--I------ENFPG------- 76 (338)
T ss_dssp ----CEEEEEEECCSHHHHHHHHHHHH--TTCCCEEECCSSBTTB---CTTCGGGGSSE--E------CCSTT-------
T ss_pred CCCCCCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEecCCCCCC---CcCcccccchh--h------cccCC-------
Confidence 445567999999999999999999999 7999999997431000 00122211100 0 00000
Q ss_pred hHHhcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeec
Q 011610 125 SFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKR 204 (481)
Q Consensus 125 ~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~ 204 (481)
+|.......+...+.+.+++.|+++++++ |.++..++ +.+.+.+..
T Consensus 77 ------------------------------~~~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~--~~~~v~~~~- 122 (338)
T 3itj_A 77 ------------------------------FPDGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSS--KPFKLWTEF- 122 (338)
T ss_dssp ------------------------------CTTCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSS--SSEEEEETT-
T ss_pred ------------------------------CcccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcC--CEEEEEEEe-
Confidence 00001235677778888889999999998 99998764 667777631
Q ss_pred ccCceEEEEcCeEEEccCCCh
Q 011610 205 TMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 205 ~~~~~~~i~ad~VIlAtG~~g 225 (481)
.+.+..+.+|.||+|||+.+
T Consensus 123 -~~~~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 123 -NEDAEPVTTDAIILATGASA 142 (338)
T ss_dssp -CSSSCCEEEEEEEECCCEEE
T ss_pred -cCCCcEEEeCEEEECcCCCc
Confidence 11256799999999999743
No 70
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.06 E-value=1.4e-09 Score=114.03 Aligned_cols=58 Identities=5% Similarity=0.036 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCC
Q 011610 161 SSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSS 224 (481)
Q Consensus 161 a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~ 224 (481)
...+.++|.+.++++|++|+++++|++|..++ ++..+|++.+ ++++.||.||.+++..
T Consensus 220 ~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~-~~~~gV~~~~-----g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 220 TGALVQGMIKLFQDLGGEVVLNARVSHMETTG-NKIEAVHLED-----GRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETT-----SCEEECSCEEECCC--
T ss_pred CcchHHHHHHHHHHhCCceeeecceeEEEeeC-CeEEEEEecC-----CcEEEcCEEEECCCHH
Confidence 45788889999999999999999999999886 4455788887 7899999999988753
No 71
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.06 E-value=6.5e-10 Score=111.33 Aligned_cols=117 Identities=17% Similarity=0.245 Sum_probs=83.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHH
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (481)
..+||+|||||++|+++|+.|++ .|++|+|||+. .+| |.|.... + . . .++
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~g--------g~~~~~~----~---------~-~-~~~---- 63 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGM--NNISCRIIESMPQLG--------GQLAALY----P---------E-K-HIY---- 63 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSC--------HHHHHTC----T---------T-S-EEC----
T ss_pred CCCCEEEECCCHHHHHHHHHHHh--CCCCEEEEecCCCCC--------CcccccC----C---------C-c-ccc----
Confidence 35899999999999999999999 79999999975 444 4442110 0 0 0 000
Q ss_pred hcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccC
Q 011610 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMN 207 (481)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~ 207 (481)
.. .+.+ ......+.+.+.+.+++.+++++++++|+++..++ ++.+.|++.+
T Consensus 64 -~~-----------~~~~------------~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~v~~~~---- 114 (360)
T 3ab1_A 64 -DV-----------AGFP------------EVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLD-DGTFETRTNT---- 114 (360)
T ss_dssp -CS-----------TTCS------------SEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECT-TSCEEEEETT----
T ss_pred -cC-----------CCCC------------CCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECC-CceEEEEECC----
Confidence 00 0000 01235667778888888899999999999998765 3468888765
Q ss_pred ceEEEEcCeEEEccCCC
Q 011610 208 LVECIEADYLLIASGSS 224 (481)
Q Consensus 208 ~~~~i~ad~VIlAtG~~ 224 (481)
+..+.+|+||+|||+.
T Consensus 115 -g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 115 -GNVYRSRAVLIAAGLG 130 (360)
T ss_dssp -SCEEEEEEEEECCTTC
T ss_pred -CcEEEeeEEEEccCCC
Confidence 5679999999999974
No 72
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.05 E-value=2.6e-09 Score=108.57 Aligned_cols=145 Identities=17% Similarity=0.185 Sum_probs=82.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
..+||+|||||++|+++|+.|++ .|++|+|+|+...... +.++.-... .........+.-.....
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~--~G~~v~v~E~~~~~~~----~~~~g~~l~---~~~~~~l~~~g~~~~~~------ 68 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD--AGVDVDVYERSPQPLS----GFGTGIVVQ---PELVHYLLEQGVELDSI------ 68 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCC----CCSCEEECC---HHHHHHHHHTTCCGGGT------
T ss_pred CCCcEEEECCCHHHHHHHHHHHh--CCCCEEEEecCCCCCC----ccccccccC---hhHHHHHHHcCCccccc------
Confidence 35899999999999999999999 7999999996532100 001110000 00011111111000000
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeee---ecC---CChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEe
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVF---PVS---DSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVE 202 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~---p~~---~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~ 202 (481)
.... .+..+.....+... +.. .....+.+.|.+.+ .|++|+++++|++++.++ +.+.|++.
T Consensus 69 ~~~~---------~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~--~~v~v~~~ 135 (397)
T 2vou_A 69 SVPS---------SSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDS--ETVQMRFS 135 (397)
T ss_dssp CBCC---------CEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECS--SCEEEEET
T ss_pred cccc---------cceEEEecCCCCccccccCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecC--CEEEEEEC
Confidence 0000 00000000011111 100 12245666666654 589999999999998875 56778877
Q ss_pred ecccCceEEEEcCeEEEccCCChh
Q 011610 203 KRTMNLVECIEADYLLIASGSSQQ 226 (481)
Q Consensus 203 ~~~~~~~~~i~ad~VIlAtG~~g~ 226 (481)
+ +.+++||.||.|+|..+.
T Consensus 136 ~-----g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 136 D-----GTKAEANWVIGADGGASV 154 (397)
T ss_dssp T-----SCEEEESEEEECCCTTCH
T ss_pred C-----CCEEECCEEEECCCcchh
Confidence 5 568999999999998764
No 73
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.04 E-value=2.1e-09 Score=112.46 Aligned_cols=96 Identities=15% Similarity=0.200 Sum_probs=65.9
Q ss_pred HHHHHHHhcCCcceeec-CCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEE
Q 011610 134 DTMSWFSDHGVELKTED-DGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECI 212 (481)
Q Consensus 134 ~~~~~~~~~Gi~~~~~~-~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i 212 (481)
++...+...|.+...-. ...+.| .....+.+.+.+.+++.||+++++++|.+++.++ +.+.|++.+ +.++
T Consensus 205 e~A~~l~~~g~~Vtli~~~~~~l~--~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v~v~~~~-----g~~i 275 (484)
T 3o0h_A 205 EFANIFHGLGVKTTLLHRGDLILR--NFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTE--NCYNVVLTN-----GQTI 275 (484)
T ss_dssp HHHHHHHHTTCEEEEECSSSSSST--TSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECS--SSEEEEETT-----SCEE
T ss_pred HHHHHHHHcCCeEEEEECCCcccc--ccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC--CEEEEEECC-----CcEE
Confidence 44455666776554322 222332 2345677888888999999999999999998765 557777765 5689
Q ss_pred EcCeEEEccCCChhHHHH-HHHcCCCc
Q 011610 213 EADYLLIASGSSQQGHRL-AAQLGHSI 238 (481)
Q Consensus 213 ~ad~VIlAtG~~g~g~~l-a~~~G~~i 238 (481)
.+|.||+|+|..+....+ ++..|+++
T Consensus 276 ~aD~Vi~A~G~~p~~~~l~l~~~g~~~ 302 (484)
T 3o0h_A 276 CADRVMLATGRVPNTTGLGLERAGVKV 302 (484)
T ss_dssp EESEEEECCCEEECCTTCCHHHHTCCB
T ss_pred EcCEEEEeeCCCcCCCCCChhhcCceE
Confidence 999999999965532222 45566654
No 74
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.03 E-value=2.1e-10 Score=115.96 Aligned_cols=143 Identities=22% Similarity=0.255 Sum_probs=87.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCc-eeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGR-CNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~-~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
.+||+|||||++|+++|+.|++ .|.+|+|+|+....+. .++ ..+.. ........+
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~--~G~~v~viE~~~~~~~-----~~~~~~l~~----~~~~~l~~~------------- 66 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQ--NGWDVRLHEKSSELRA-----FGAGIYLWH----NGLRVLEGL------------- 66 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSCCC-----CSSEEEEEH----HHHHHHHHT-------------
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCCCCC-----CCceEEeCc----cHHHHHHHc-------------
Confidence 5899999999999999999999 7999999996532210 011 00000 000111111
Q ss_pred cCChHHHHHHHHhcCC-----cceeecCCeee---e------cCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCC
Q 011610 129 LHGPMDTMSWFSDHGV-----ELKTEDDGRVF---P------VSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAG 194 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi-----~~~~~~~g~~~---p------~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~ 194 (481)
+..+ -+...+. .+.. . +... + .......+.+.|.+.+.+.|++|+++++|++++. +
T Consensus 67 --g~~~---~~~~~~~~~~~~~~~~-~-g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-- 136 (379)
T 3alj_A 67 --GALD---DVLQGSHTPPTYETWM-H-NKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V-- 136 (379)
T ss_dssp --TCHH---HHHTTCBCCSCEEEEE-T-TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T--
T ss_pred --CCHH---HHHhhCCCccceEEEe-C-CceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C--
Confidence 0000 0001110 0000 0 1100 0 0123467888999999999999999999999986 4
Q ss_pred CeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCC
Q 011610 195 RKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGH 236 (481)
Q Consensus 195 ~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~ 236 (481)
+ .|++.+ +.+++||.||.|+|..+. +.+.++.
T Consensus 137 ~--~v~~~~-----g~~~~ad~vV~AdG~~s~---vr~~l~~ 168 (379)
T 3alj_A 137 G--RLTLQT-----GEVLEADLIVGADGVGSK---VRDSIGF 168 (379)
T ss_dssp T--EEEETT-----SCEEECSEEEECCCTTCH---HHHHHCC
T ss_pred C--EEEECC-----CCEEEcCEEEECCCccHH---HHHHhcC
Confidence 4 667664 567999999999998763 4445554
No 75
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.03 E-value=8.7e-10 Score=109.34 Aligned_cols=114 Identities=20% Similarity=0.249 Sum_probs=79.3
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHH
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (481)
.+.+||+|||||++|+++|+.|++ .|++|+|+|+..+| |.|...... ..++ .+
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~g--------g~~~~~~~~--------~~~~----~~----- 64 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAAR--AQLAPLVFEGTSFG--------GALMTTTDV--------ENYP----GF----- 64 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHH--TTCCCEEECCSSCS--------CGGGSCSCB--------CCST----TC-----
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh--CCCeEEEEecCCCC--------Cceeccchh--------hhcC----CC-----
Confidence 356899999999999999999999 79999999976655 333221100 0000 00
Q ss_pred hcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEE-EEeeccc
Q 011610 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLL-KVEKRTM 206 (481)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V-~~~~~~~ 206 (481)
|.......+...+.+.+++.|+++++++ |.++.. + +.+.| .+.+
T Consensus 65 ----------------------------~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~--~~~~v~~~~~--- 109 (335)
T 2a87_A 65 ----------------------------RNGITGPELMDEMREQALRFGADLRMED-VESVSL-H--GPLKSVVTAD--- 109 (335)
T ss_dssp ----------------------------TTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-S--SSSEEEEETT---
T ss_pred ----------------------------CCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-C--CcEEEEEeCC---
Confidence 0001234556677777788899999987 888876 3 44666 5554
Q ss_pred CceEEEEcCeEEEccCCCh
Q 011610 207 NLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 207 ~~~~~i~ad~VIlAtG~~g 225 (481)
+.++.+|+||+|||+.+
T Consensus 110 --g~~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 110 --GQTHRARAVILAMGAAA 126 (335)
T ss_dssp --SCEEEEEEEEECCCEEE
T ss_pred --CCEEEeCEEEECCCCCc
Confidence 56799999999999753
No 76
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.03 E-value=9.3e-10 Score=108.33 Aligned_cols=114 Identities=19% Similarity=0.279 Sum_probs=82.0
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
++||+|||||++|+++|+.|++ .|++|+|+|+. .+| |.+.. .|+.. .+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~g--------G~~~~-------------~~~~~--~~~----- 56 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM--RQASVKIIESLPQLG--------GQLSA-------------LYPEK--YIY----- 56 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSC--------HHHHH-------------HCTTS--EEC-----
T ss_pred cceEEEECCCHHHHHHHHHHHH--CCCCEEEEEcCCCCC--------ceehh-------------cCCCc--eEe-----
Confidence 5899999999999999999999 78999999965 444 33211 01000 000
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
.+. + +| ......+...+.+.+++.|++++++++|+++..++ ++.|.|.+.+
T Consensus 57 ~~~-----------~-----------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~v~~~~----- 107 (332)
T 3lzw_A 57 DVA-----------G-----------FP-KIRAQELINNLKEQMAKFDQTICLEQAVESVEKQA-DGVFKLVTNE----- 107 (332)
T ss_dssp CST-----------T-----------CS-SEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECT-TSCEEEEESS-----
T ss_pred ccC-----------C-----------CC-CCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECC-CCcEEEEECC-----
Confidence 000 0 00 01245677788888888899999999999998875 3478888875
Q ss_pred eEEEEcCeEEEccCC
Q 011610 209 VECIEADYLLIASGS 223 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~ 223 (481)
+ ++.+|+||+|||+
T Consensus 108 g-~~~~d~vVlAtG~ 121 (332)
T 3lzw_A 108 E-THYSKTVIITAGN 121 (332)
T ss_dssp E-EEEEEEEEECCTT
T ss_pred C-EEEeCEEEECCCC
Confidence 4 4999999999997
No 77
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.03 E-value=3.6e-10 Score=120.96 Aligned_cols=78 Identities=10% Similarity=0.034 Sum_probs=56.6
Q ss_pred ChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCC-eEEEEEeec---ccCc-------eEEEEcCeEEEccCCChhH-
Q 011610 160 SSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGR-KFLLKVEKR---TMNL-------VECIEADYLLIASGSSQQG- 227 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~-~~~V~~~~~---~~~~-------~~~i~ad~VIlAtG~~g~g- 227 (481)
....+.+.|.+.+++.||+|+++++|+++..++ ++ ..+|++.+. .++. +.+++||.||+|+|+.+..
T Consensus 142 ~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~-~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr 220 (584)
T 2gmh_A 142 RLGHLVSWMGEQAEALGVEVYPGYAAAEILFHE-DGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLA 220 (584)
T ss_dssp CHHHHHHHHHHHHHHTTCEEETTCCEEEEEECT-TSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHH
T ss_pred eHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-CCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHH
Confidence 356788899999999999999999999998765 33 345776520 0111 2579999999999998753
Q ss_pred HHHHHHcCCCc
Q 011610 228 HRLAAQLGHSI 238 (481)
Q Consensus 228 ~~la~~~G~~i 238 (481)
..+.+.+|+..
T Consensus 221 ~~l~~~~gl~~ 231 (584)
T 2gmh_A 221 KQLYKKFDLRA 231 (584)
T ss_dssp HHHHHHTTTTT
T ss_pred HHHHHHhCCCC
Confidence 34556667653
No 78
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.03 E-value=1.6e-09 Score=110.16 Aligned_cols=143 Identities=17% Similarity=0.299 Sum_probs=83.2
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhH
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (481)
...+||+|||||++|+++|+.|++ .|.+|+|+|+. .++.+. . ++.+.+... ........
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~--~G~~v~v~E~~~~~~~~~--~-g~~~~~~~~---~~~~~l~~------------ 83 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ--NGIDVSVYERDNDREARI--F-GGTLDLHKG---SGQEAMKK------------ 83 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT--TTCEEEEEECSSSTTCCC--C-SCCEECCTT---THHHHHHH------------
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCCccccc--c-CCeeeeCCc---cHHHHHHh------------
Confidence 356899999999999999999999 79999999965 333211 1 122222110 00011111
Q ss_pred HhcCChHHHHHHHHhcCCc---ceeecCCeee-----ec-------CCChHHHHHHHHHHHHhCCCEEEcCceEEEEEec
Q 011610 127 FSLHGPMDTMSWFSDHGVE---LKTEDDGRVF-----PV-------SDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSD 191 (481)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~---~~~~~~g~~~-----p~-------~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~ 191 (481)
.+..+. +...+.. ......+..+ |. ......+.+.|.+.+. +++|+++++|++++.+
T Consensus 84 ---~gl~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~ 155 (398)
T 2xdo_A 84 ---AGLLQT---YYDLALPMGVNIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLE--NDTVIWDRKLVMLEPG 155 (398)
T ss_dssp ---TTCHHH---HHHHCBCCCEEEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSC--TTSEEESCCEEEEEEC
T ss_pred ---cChHHH---HHHhhcccceEEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcC--CCEEEECCEEEEEEEC
Confidence 111010 0000000 0000011111 10 1234566677776654 3689999999999887
Q ss_pred CCCCeEEEEEeecccCceEEEEcCeEEEccCCCh
Q 011610 192 NAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 192 ~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g 225 (481)
+ +.+.|++.+ +.+++||.||.|+|..+
T Consensus 156 ~--~~v~v~~~~-----g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 156 K--KKWTLTFEN-----KPSETADLVILANGGMS 182 (398)
T ss_dssp S--SSEEEEETT-----SCCEEESEEEECSCTTC
T ss_pred C--CEEEEEECC-----CcEEecCEEEECCCcch
Confidence 5 567788765 56799999999999765
No 79
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.03 E-value=3.1e-09 Score=112.90 Aligned_cols=70 Identities=16% Similarity=0.208 Sum_probs=51.3
Q ss_pred hHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 161 SSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 161 a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
...+.+.|.+.+.+. |+++++|++++.++ +.+.|++.+..++...+++||+||.|+|+.+. +.+.+|+..
T Consensus 137 ~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~--~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~---vR~~lg~~~ 206 (549)
T 2r0c_A 137 QHWLAPLLAEAVGER---LRTRSRLDSFEQRD--DHVRATITDLRTGATRAVHARYLVACDGASSP---TRKALGIDA 206 (549)
T ss_dssp HHHHHHHHHHHHGGG---EECSEEEEEEEECS--SCEEEEEEETTTCCEEEEEEEEEEECCCTTCH---HHHHHTCCC
T ss_pred HHHHHHHHHHHHHHh---cccCcEEEEEEEeC--CEEEEEEEECCCCCEEEEEeCEEEECCCCCcH---HHHHcCCCC
Confidence 456777888888776 99999999999875 55777765411222367999999999998763 556667654
No 80
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.02 E-value=1.8e-09 Score=112.36 Aligned_cols=58 Identities=21% Similarity=0.232 Sum_probs=47.4
Q ss_pred CChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCC
Q 011610 159 DSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS 223 (481)
Q Consensus 159 ~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~ 223 (481)
.....+.+.|.+.+++.|++|+++++|++|..++ ++.+.|+++ +.++.||+||+|++.
T Consensus 231 gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~-~~~~~v~~~------~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 231 GGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQA-EGRWKVSLR------DSSLEADHVISAIPA 288 (477)
T ss_dssp TCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECG-GGCEEEECS------SCEEEESEEEECSCH
T ss_pred CCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcC-CceEEEEEC------CeEEEcCEEEECCCH
Confidence 3345788899999999999999999999998865 334878665 457999999999985
No 81
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.02 E-value=1.7e-09 Score=101.86 Aligned_cols=120 Identities=11% Similarity=0.028 Sum_probs=80.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
++||+|||||++|+.+|+.|++ .|.+|+|||+. ... +..|+... . .+. ...+. .
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~--~g~~v~lie~~~~~~-------G~~~~~~~----~------~~~--~~~~~----~ 57 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ--KGVRVGLLTQSLDAV-------MMPFLPPK----P------PFP--PGSLL----E 57 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCGGGT-------TCCSSCCC----S------CCC--TTCHH----H
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCCEEEEecCCCcC-------CcccCccc----c------ccc--hhhHH----h
Confidence 5899999999999999999999 79999999975 211 11121110 0 010 01111 1
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhC-CCEEEcCceEEEEEecCCCCeEEEEEeecccC
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHR-GVVLQTGKVVTTASSDNAGRKFLLKVEKRTMN 207 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~-Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~ 207 (481)
.++ + ..+ | ....+.+.|.+.+++. |++++ +++|+++..++ +..+.|.+.+
T Consensus 58 ~~~-------------d----~~g---~---~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~-~~v~~v~~~~---- 108 (232)
T 2cul_A 58 RAY-------------D----PKD---E---RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEG-NRVVGVRTWE---- 108 (232)
T ss_dssp HHC-------------C----TTC---C---CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-TEEEEEEETT----
T ss_pred hhc-------------c----CCC---C---CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC-CEEEEEEECC----
Confidence 111 0 011 1 3567778888889887 99998 57999998765 3435677764
Q ss_pred ceEEEEcCeEEEccCCC
Q 011610 208 LVECIEADYLLIASGSS 224 (481)
Q Consensus 208 ~~~~i~ad~VIlAtG~~ 224 (481)
+.++.||.||+|+|..
T Consensus 109 -g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 109 -GPPARGEKVVLAVGSF 124 (232)
T ss_dssp -SCCEECSEEEECCTTC
T ss_pred -CCEEECCEEEECCCCC
Confidence 5579999999999964
No 82
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.02 E-value=5.5e-10 Score=115.95 Aligned_cols=153 Identities=14% Similarity=0.107 Sum_probs=86.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCC-----CcEEEEeCC-CCCCce--EEecCCceeeccCCCcchhHHhhccCCCCh
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPK-----LNVVIIEKG-KPLSKV--KISGGGRCNVTNGHCADKMILAGHYPRGHK 120 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g-----~~V~llE~~-~~g~k~--~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~ 120 (481)
..+||+|||||++|+++|+.|++ .| .+|+|||+. .++... .. ..+.+... +...+....
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~--~g~~~~~~~v~liE~~~~~g~~~~~~~---~~~~~~~~-------~~~~l~~~~- 95 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQE--RAQAQGALEVLFLDKQGDYRWHGNTLV---SQSELQIS-------FLKDLVSLR- 95 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHH--HHHHHCCCCEEEEESCSSCCSSGGGCC---SSCBCSSC-------TTSSSSTTT-
T ss_pred CcCCEEEECCCHHHHHHHHHHHh--cccccCcccEEEEecCCCCCCcCCCCC---CCCcCCcc-------hhhcccccc-
Confidence 46899999999999999999999 57 899999965 444100 00 00100000 000000000
Q ss_pred hchhhHHhcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCC-CCeE--
Q 011610 121 EFRGSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNA-GRKF-- 197 (481)
Q Consensus 121 ~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~-~~~~-- 197 (481)
.......+..|+...+...........|| ....+.+.+...+++.+++++++++|+++..+++ ++.|
T Consensus 96 -------~p~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~ 165 (463)
T 3s5w_A 96 -------NPTSPYSFVNYLHKHDRLVDFINLGTFYP---CRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEAL 165 (463)
T ss_dssp -------CTTCTTSHHHHHHHTTCHHHHHHHCCSCC---BHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEE
T ss_pred -------CCCCCCChhHhhhhcCceeecccccCCCC---CHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEE
Confidence 00001122233333332111111122332 3456777787888888999999999999987520 1333
Q ss_pred EEEEeecccCceEEEEcCeEEEccCCCh
Q 011610 198 LLKVEKRTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 198 ~V~~~~~~~~~~~~i~ad~VIlAtG~~g 225 (481)
.|++.+. .+...++.+|+||+|||+.+
T Consensus 166 ~V~~~~g-~g~~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 166 RVISRNA-DGEELVRTTRALVVSPGGTP 192 (463)
T ss_dssp EEEEEET-TSCEEEEEESEEEECCCCEE
T ss_pred EEEEecC-CCceEEEEeCEEEECCCCCC
Confidence 5666541 11123899999999999743
No 83
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.01 E-value=1.2e-09 Score=112.20 Aligned_cols=37 Identities=24% Similarity=0.284 Sum_probs=33.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC-CCCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLS 88 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~ 88 (481)
++||+|||||++|++||+.|++ .|.+|+|||+ +.+|+
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~--~G~~V~vlE~~~~~GG 38 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTN--AGKKVLLLEGGERLGG 38 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHH--TTCCEEEECSSSSSBT
T ss_pred CCCEEEECCcHHHHHHHHHHHH--cCCeEEEEecCCCccC
Confidence 3799999999999999999999 7999999996 56764
No 84
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.01 E-value=1.6e-09 Score=112.12 Aligned_cols=155 Identities=14% Similarity=0.165 Sum_probs=87.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCC--cEEEEeCC-CCCCceEEecCCceeeccCCC----cchh-HHh--hccCCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG-KPLSKVKISGGGRCNVTNGHC----ADKM-ILA--GHYPRG 118 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~--~V~llE~~-~~g~k~~~sG~g~~n~~~~~~----~~~~-~~~--~~~~~~ 118 (481)
+.+||+|||||++|+++|..|++ .|. +|+|+|+. .+| |.|+...... .+.. ... ..+...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~--~G~~~~V~v~E~~~~~G--------G~~~~~~~~~~~~~ip~~~~~~~~~~~~~g 74 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA--EKAFDQVTLFERRGSPG--------GVWNYTSTLSNKLPVPSTNPILTTEPIVGP 74 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT--TTCCSEEEEECSSSSSS--------TTCSCCSCCCSCCCSSBCCTTCCCCCBCCS
T ss_pred CCCEEEEECccHHHHHHHHHHHh--cCCCCCeEEEecCCCCC--------CeecCCCCCCcccccccccccccccccccc
Confidence 46899999999999999999999 688 99999965 565 3332221100 0000 000 000000
Q ss_pred ------ChhchhhHHhcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecC
Q 011610 119 ------HKEFRGSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDN 192 (481)
Q Consensus 119 ------~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~ 192 (481)
...++.. +....+.+...+ .+.++. .....|| ....+.+.+.+.+++.++.++++++|+++..++
T Consensus 75 ~~~~~~~~~~~~~-l~~~~~~~~~~~---~~~~~~--~~~~~~~---~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~ 145 (447)
T 2gv8_A 75 AALPVYPSPLYRD-LQTNTPIELMGY---CDQSFK--PQTLQFP---HRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKD 145 (447)
T ss_dssp SSCCBCCCCCCTT-CBCSSCHHHHSC---TTCCCC--TTCCSSC---BHHHHHHHHHHHHGGGGGGEECSEEEEEEEEET
T ss_pred cccCCccCchhhh-hccCCCHHHhcc---CCCCCC--CCCCCCC---CHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC
Confidence 0001000 011111111111 111111 1111222 356777888888888788999999999998764
Q ss_pred CCCeEEEEEeecccCc-eEEEEcCeEEEccCCC
Q 011610 193 AGRKFLLKVEKRTMNL-VECIEADYLLIASGSS 224 (481)
Q Consensus 193 ~~~~~~V~~~~~~~~~-~~~i~ad~VIlAtG~~ 224 (481)
+.|.|++.+..++. ..++.+|+||+|||+.
T Consensus 146 --~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~ 176 (447)
T 2gv8_A 146 --GSWVVTYKGTKAGSPISKDIFDAVSICNGHY 176 (447)
T ss_dssp --TEEEEEEEESSTTCCEEEEEESEEEECCCSS
T ss_pred --CeEEEEEeecCCCCeeEEEEeCEEEECCCCC
Confidence 67888876411121 2379999999999974
No 85
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.00 E-value=1.8e-09 Score=112.41 Aligned_cols=151 Identities=16% Similarity=0.170 Sum_probs=86.8
Q ss_pred CCeEEEECCchHHHHHHHHHhccC-CCCc---EEEEeCC-CCCCceEEecCCceeeccCCCcchhH---HhhccCCCChh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVA-PKLN---VVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMI---LAGHYPRGHKE 121 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~-~g~~---V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~---~~~~~~~~~~~ 121 (481)
.+||+|||||++|++||..|++.. .|.+ |+|||+. .+| |.|+.......+... ....|......
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G--------G~w~~~~~~g~~~~g~~~~~~~y~~l~~~ 73 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG--------GQWNYTWRTGLDENGEPVHSSMYRYLWSN 73 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC--------GGGSCCSCCSBCTTSSBCCCCCCTTCBCS
T ss_pred CCcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC--------CEeecCCCCCccccCCCCcCccccchhhc
Confidence 379999999999999999998711 2688 9999975 565 445433211100000 00001000000
Q ss_pred chhhH--HhcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCE--EEcCceEEEEEecCCCCeE
Q 011610 122 FRGSF--FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVV--LQTGKVVTTASSDNAGRKF 197 (481)
Q Consensus 122 ~~~~~--l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~--i~~~~~V~~i~~~~~~~~~ 197 (481)
..... +..+... ...+ .....| .....+.+.+.+.+++.|++ ++++++|+.+..+++++.|
T Consensus 74 ~~~~~~~~~~~~~~------~~~~------~~~~~~---~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~ 138 (464)
T 2xve_A 74 GPKECLEFADYTFD------EHFG------KPIASY---PPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTF 138 (464)
T ss_dssp SCGGGTCBTTBCHH------HHHS------SCCCSS---CBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEE
T ss_pred CChhhcccCCCCCC------cccC------CCCCCC---CCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcE
Confidence 00000 0011100 0000 001122 24577888888888888998 9999999999876512378
Q ss_pred EEEEeecccCceEEEEcCeEEEccCC
Q 011610 198 LLKVEKRTMNLVECIEADYLLIASGS 223 (481)
Q Consensus 198 ~V~~~~~~~~~~~~i~ad~VIlAtG~ 223 (481)
.|++.+...+...++.+|+||+|||.
T Consensus 139 ~V~~~~~~~g~~~~~~~d~VVvAtG~ 164 (464)
T 2xve_A 139 TVTVQDHTTDTIYSEEFDYVVCCTGH 164 (464)
T ss_dssp EEEEEETTTTEEEEEEESEEEECCCS
T ss_pred EEEEEEcCCCceEEEEcCEEEECCCC
Confidence 88876421222367999999999994
No 86
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.99 E-value=1.9e-09 Score=104.39 Aligned_cols=110 Identities=15% Similarity=0.261 Sum_probs=76.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
++||+|||||++|+++|+.|++ .|++|+|+|+..... +. .... ..|...
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~~--------~~--~~~~--------~~~~~~----------- 50 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGR--ARKNILLVDAGERRN--------RF--ASHS--------HGFLGQ----------- 50 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEEECCCCGG--------GG--CSCC--------CSSTTC-----------
T ss_pred CCCEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCccc--------cc--chhh--------cCCcCC-----------
Confidence 5899999999999999999999 789999999765331 10 0000 000000
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhC-CCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHR-GVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~-Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
.......+...+.+.+.+. +++++. ++|+++..++ +.+.|.+.+
T Consensus 51 ---------------------------~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~~~~----- 95 (297)
T 3fbs_A 51 ---------------------------DGKAPGEIIAEARRQIERYPTIHWVE-GRVTDAKGSF--GEFIVEIDG----- 95 (297)
T ss_dssp ---------------------------TTCCHHHHHHHHHHHHTTCTTEEEEE-SCEEEEEEET--TEEEEEETT-----
T ss_pred ---------------------------CCCCHHHHHHHHHHHHHhcCCeEEEE-eEEEEEEEcC--CeEEEEECC-----
Confidence 0012344556666666665 677764 5999998775 668888875
Q ss_pred eEEEEcCeEEEccCCCh
Q 011610 209 VECIEADYLLIASGSSQ 225 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g 225 (481)
+.++.+|+||+|||+.+
T Consensus 96 g~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 96 GRRETAGRLILAMGVTD 112 (297)
T ss_dssp SCEEEEEEEEECCCCEE
T ss_pred CCEEEcCEEEECCCCCC
Confidence 56899999999999754
No 87
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.97 E-value=2.5e-09 Score=111.19 Aligned_cols=71 Identities=17% Similarity=0.265 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEE-EeecccCceEEEEcCeEEEccCCChhHHHH-HHHcCCCc
Q 011610 161 SSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLK-VEKRTMNLVECIEADYLLIASGSSQQGHRL-AAQLGHSI 238 (481)
Q Consensus 161 a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~-~~~~~~~~~~~i~ad~VIlAtG~~g~g~~l-a~~~G~~i 238 (481)
...+.+.+.+.+++.||+++++++|.++..++ ++.+.|+ +.+ +. +.+|.||+|+|..+....+ ++.+|+++
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~~-----g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~ 282 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSADA-DGRRVATTMKH-----GE-IVADQVMLALGRMPNTNGLGLEAAGVRT 282 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEECT-TSCEEEEESSS-----CE-EEESEEEECSCEEESCTTSSTGGGTCCB
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcC-CCEEEEEEcCC-----Ce-EEeCEEEEeeCcccCCCCCCccccCceE
Confidence 46778888899999999999999999998764 3446677 664 55 9999999999976542222 45556554
No 88
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.97 E-value=2.1e-09 Score=113.82 Aligned_cols=135 Identities=17% Similarity=0.223 Sum_probs=88.0
Q ss_pred CCCeEEEECCchHHHHHHHHHh-ccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhH
Q 011610 49 SEELLVVVGGGAAGVYGAIRAK-TVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la-~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (481)
.++||+|||||++|+++|+.|+ + .|.+|+|||+. .+| |.|.... |+....+....
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~--~G~~v~viE~~~~~G--------Gtw~~~~------------ypg~~~d~~s~- 63 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHE--LGLTTVGFDKADGPG--------GTWYWNR------------YPGALSDTESH- 63 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSSSSC--------THHHHCC------------CTTCEEEEEGG-
T ss_pred CCCCEEEECcCHHHHHHHHHHHHc--CCCCEEEEECCCCCC--------CcccccC------------CCCceecCCcc-
Confidence 4589999999999999999999 7 78999999965 555 3332211 10000000000
Q ss_pred HhcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCC--EEEcCceEEEEEecCCCCeEEEEEeec
Q 011610 127 FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGV--VLQTGKVVTTASSDNAGRKFLLKVEKR 204 (481)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv--~i~~~~~V~~i~~~~~~~~~~V~~~~~ 204 (481)
...+.... +.....+. ...|+ ....+.+.+.+.+++.|+ +++++++|+++..+++++.|.|++.+
T Consensus 64 ~~~~~~~~--~~~~~~~~-------~~~~~---~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~- 130 (540)
T 3gwf_A 64 LYRFSFDR--DLLQESTW-------KTTYI---TQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDH- 130 (540)
T ss_dssp GSSCCSCH--HHHHHCCC-------SBSEE---EHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETT-
T ss_pred eeeecccc--ccccCCCC-------cccCC---CHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcC-
Confidence 00111000 01111111 12232 356778888888999998 89999999999887523578888876
Q ss_pred ccCceEEEEcCeEEEccCC
Q 011610 205 TMNLVECIEADYLLIASGS 223 (481)
Q Consensus 205 ~~~~~~~i~ad~VIlAtG~ 223 (481)
+.++.||+||+|||.
T Consensus 131 ----G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 131 ----GEVYRAKYVVNAVGL 145 (540)
T ss_dssp ----SCEEEEEEEEECCCS
T ss_pred ----CCEEEeCEEEECCcc
Confidence 668999999999995
No 89
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.96 E-value=1e-09 Score=108.49 Aligned_cols=112 Identities=25% Similarity=0.339 Sum_probs=78.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC-----CCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-----GKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRG 124 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~-----~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (481)
.+||+|||||++|+++|+.|++ .|++|+|+|+ ...+ |.+..... . ..+.
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~--~g~~v~lie~~~~~~~~~g--------g~~~~~~~--~------~~~~-------- 61 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAAR--AELKPLLFEGWMANDIAPG--------GQLTTTTD--V------ENFP-------- 61 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCCEEECCSSBTTBCTT--------CGGGGCSE--E------CCST--------
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCeEEEEeccCccccCCC--------ceeeeccc--c------ccCC--------
Confidence 5799999999999999999999 7899999997 1222 22211100 0 0000
Q ss_pred hHHhcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeec
Q 011610 125 SFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKR 204 (481)
Q Consensus 125 ~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~ 204 (481)
. +|.......+...+.+.+++.|++++.++ |.++..++ +.+.|++ +
T Consensus 62 ----~-------------------------~~~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~--~~~~v~~-~- 107 (333)
T 1vdc_A 62 ----G-------------------------FPEGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSS--KPFKLFT-D- 107 (333)
T ss_dssp ----T-------------------------CTTCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSS--SSEEEEC-S-
T ss_pred ----C-------------------------CccCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcC--CEEEEEE-C-
Confidence 0 00001234567777788888999999987 99998764 5677776 3
Q ss_pred ccCceEEEEcCeEEEccCCCh
Q 011610 205 TMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 205 ~~~~~~~i~ad~VIlAtG~~g 225 (481)
+.++++|.||+|||+++
T Consensus 108 ----~~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 108 ----SKAILADAVILAIGAVA 124 (333)
T ss_dssp ----SEEEEEEEEEECCCEEE
T ss_pred ----CcEEEcCEEEECCCCCc
Confidence 57899999999999754
No 90
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.96 E-value=1.5e-09 Score=108.74 Aligned_cols=134 Identities=22% Similarity=0.260 Sum_probs=82.8
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
++||+|||||++|+++|+.|++ .|. +|+|||+..+| +.|....... ++.. ..+....+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~--~g~~~v~lie~~~~G--------g~~~~~~~~~--------~~~~--~~~~~~~~g 63 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD--FGITDVIILEKGTVG--------HSFKHWPKST--------RTIT--PSFTSNGFG 63 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCCEEEECSSSTT--------HHHHTSCTTC--------BCSS--CCCCCGGGT
T ss_pred cCcEEEECcCHHHHHHHHHHHH--cCCCcEEEEecCCCC--------CccccCcccc--------cccC--cchhcccCC
Confidence 4799999999999999999999 688 99999976655 3221110000 0000 000000000
Q ss_pred --cC---ChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEee
Q 011610 129 --LH---GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEK 203 (481)
Q Consensus 129 --~~---~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~ 203 (481)
.+ ..... ..+.. ...+ .....+...+.+.+++.|++++++++|+++..++ +.+.|.+.+
T Consensus 64 ~~~~~~~~~~~~-~~~~~----------~~~~---~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~ 127 (369)
T 3d1c_A 64 MPDMNAISMDTS-PAFTF----------NEEH---ISGETYAEYLQVVANHYELNIFENTVVTNISADD--AYYTIATTT 127 (369)
T ss_dssp CCCTTCSSTTCC-HHHHH----------CCSS---CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECS--SSEEEEESS
T ss_pred chhhhhcccccc-ccccc----------cccC---CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECC--CeEEEEeCC
Confidence 00 00000 00000 0001 1345677788888888999999999999998764 567787764
Q ss_pred cccCceEEEEcCeEEEccCCCh
Q 011610 204 RTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 204 ~~~~~~~~i~ad~VIlAtG~~g 225 (481)
+ ++.+|+||+|||+.+
T Consensus 128 -----g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 128 -----E-TYHADYIFVATGDYN 143 (369)
T ss_dssp -----C-CEEEEEEEECCCSTT
T ss_pred -----C-EEEeCEEEECCCCCC
Confidence 3 689999999999754
No 91
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.95 E-value=4.9e-10 Score=116.14 Aligned_cols=160 Identities=16% Similarity=0.152 Sum_probs=88.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCCh---hchhh
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHK---EFRGS 125 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~---~~~~~ 125 (481)
+++||+|||||++|+++|+.|++ .|++|+|||+....+. |...|. .... ......+.-... .+...
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~--~G~~V~vlE~~~~~~~----g~~~~g----~~l~-~~~l~~lg~~~~~~~~~~~~ 73 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSR--RGLKILLVDSKPWNRI----GDKPCG----DAVS-KAHFDKLGMPYPKGEELENK 73 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSS--SSCCEEEECSSCGGGT----TCSCCC----CEEE-HHHHHHTTCCCCCGGGEEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCCCCCC----Cccccc----cccc-HHHHHHhcCCCCchHHHHhh
Confidence 35899999999999999999999 7999999996532100 000010 0000 011111110000 00000
Q ss_pred --HHhcCChHHHHHHHHhcC-CcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEe
Q 011610 126 --FFSLHGPMDTMSWFSDHG-VELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVE 202 (481)
Q Consensus 126 --~l~~~~~~~~~~~~~~~G-i~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~ 202 (481)
-+..+.+. + ..+.....+. ......+.+.|.+.+.+.|++++++++|+++..++ +...+|++.
T Consensus 74 ~~~~~~~~~~---------~~~~~~~~~~~~----~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~ 139 (453)
T 3atr_A 74 INGIKLYSPD---------MQTVWTVNGEGF----ELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED-GYVKGAVLF 139 (453)
T ss_dssp EEEEEEECTT---------SSCEEEEEEEEE----EECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEE
T ss_pred hcceEEECCC---------CceEEeECCCcE----EEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC-CEEEEEEEE
Confidence 00000000 0 0000010011 12456788899999999999999999999998765 333346654
Q ss_pred ecccCceEEEEcCeEEEccCCChhHHHHHHHcCC
Q 011610 203 KRTMNLVECIEADYLLIASGSSQQGHRLAAQLGH 236 (481)
Q Consensus 203 ~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~ 236 (481)
+..++...+++||.||.|+|..+. +.+.+|.
T Consensus 140 ~~~~G~~~~~~ad~VV~AdG~~s~---vr~~l~~ 170 (453)
T 3atr_A 140 NRRTNEELTVYSKVVVEATGYSRS---FRSKLPP 170 (453)
T ss_dssp ETTTTEEEEEECSEEEECCGGGCT---TGGGSCT
T ss_pred EcCCCceEEEEcCEEEECcCCchh---hHHhcCC
Confidence 200122248999999999997652 3344554
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.95 E-value=3.4e-09 Score=112.46 Aligned_cols=137 Identities=20% Similarity=0.180 Sum_probs=86.6
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhH
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (481)
+..+||+|||||++|+++|+.|++ .|++|+|||+. .+| |.|........ .. ....... .
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~--~G~~v~iiE~~~~~G--------G~w~~~~~pg~-------~~-d~~~~~~-~- 73 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRE--LGRSVHVIETAGDVG--------GVWYWNRYPGA-------RC-DIESIEY-C- 73 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSC--------THHHHCCCTTC-------BC-SSCTTTS-S-
T ss_pred CCCCCEEEECccHHHHHHHHHHHh--CCCCEEEEeCCCCCC--------CcccccCCCce-------ee-ccccccc-c-
Confidence 346899999999999999999999 68999999965 555 44421110000 00 0000000 0
Q ss_pred HhcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCC--CEEEcCceEEEEEecCCCCeEEEEEeec
Q 011610 127 FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRG--VVLQTGKVVTTASSDNAGRKFLLKVEKR 204 (481)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~G--v~i~~~~~V~~i~~~~~~~~~~V~~~~~ 204 (481)
..|.+.. ...... ...|+ ....+.+.+...+++.+ ++++++++|+++..+++++.|.|++++
T Consensus 74 -~~f~~~~----~~~~~~-------~~~~~---~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~- 137 (542)
T 1w4x_A 74 -YSFSEEV----LQEWNW-------TERYA---SQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNH- 137 (542)
T ss_dssp -CCSCHHH----HHHCCC-------CBSSC---BHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETT-
T ss_pred -cccChhh----hhccCc-------ccccC---CHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECC-
Confidence 0112211 111110 11232 34567777777777766 679999999999876423578888875
Q ss_pred ccCceEEEEcCeEEEccCCC
Q 011610 205 TMNLVECIEADYLLIASGSS 224 (481)
Q Consensus 205 ~~~~~~~i~ad~VIlAtG~~ 224 (481)
+.+++||.||+|||..
T Consensus 138 ----G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 138 ----GDRIRARYLIMASGQL 153 (542)
T ss_dssp ----CCEEEEEEEEECCCSC
T ss_pred ----CCEEEeCEEEECcCCC
Confidence 5679999999999964
No 93
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.95 E-value=5.6e-10 Score=117.27 Aligned_cols=162 Identities=13% Similarity=0.161 Sum_probs=94.5
Q ss_pred CCCCCCCCeEEEECCchHHHHHHHHHhccC------------CCCcEEEEeCC-CCCCc-eEEecCCceeeccCCCcchh
Q 011610 44 LTHTSSEELLVVVGGGAAGVYGAIRAKTVA------------PKLNVVIIEKG-KPLSK-VKISGGGRCNVTNGHCADKM 109 (481)
Q Consensus 44 ~~~~~~~~DVvIIGgG~aGl~aA~~la~~~------------~g~~V~llE~~-~~g~k-~~~sG~g~~n~~~~~~~~~~ 109 (481)
+++.+..+||||||+||+||++|+.|.+.+ .+..++.+|+. ..+.. -..--+.+|++.
T Consensus 33 ~tp~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~-------- 104 (501)
T 4b63_A 33 STPQDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQIS-------- 104 (501)
T ss_dssp CCCTTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSC--------
T ss_pred CCCCCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCcccccc--------
Confidence 344456689999999999999999998621 12345566632 22210 000000111110
Q ss_pred HHhhccCCCChhchhhHHhcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEE
Q 011610 110 ILAGHYPRGHKEFRGSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTAS 189 (481)
Q Consensus 110 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~ 189 (481)
|.. +++. +-...++..+..++++.|--+........|| ...++.++|...+++.+..|+++++|++++
T Consensus 105 -fl~-------Dlvt-l~~P~s~~sf~~yl~~~~rl~~f~~~~~~~p---~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~ 172 (501)
T 4b63_A 105 -FIK-------DLAT-LRDPRSSFTFLNYLHQKGRLIHFTNLSTFLP---ARLEFEDYMRWCAQQFSDVVAYGEEVVEVI 172 (501)
T ss_dssp -GGG-------SSST-TTCTTCTTSHHHHHHHHTCHHHHHTTCCSCC---BHHHHHHHHHHHHHTTGGGEEESEEEEEEE
T ss_pred -chh-------hhcc-ccCCCCccchHHHHHHhCCccCCccccCCCC---CHHHHHHHHHHHHHHcCCceEcceEEEeec
Confidence 000 0100 0001112234556655543222222234454 356788999999998888899999999998
Q ss_pred ecCCC------CeEEEEEeecccCceEEEEcCeEEEccCCCh
Q 011610 190 SDNAG------RKFLLKVEKRTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 190 ~~~~~------~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g 225 (481)
..+.+ +.|.|++.+...+...++.|+.||+|||..+
T Consensus 173 ~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P 214 (501)
T 4b63_A 173 PGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTA 214 (501)
T ss_dssp EECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEE
T ss_pred cccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCC
Confidence 64311 2588988765555567899999999999644
No 94
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.95 E-value=2.8e-09 Score=113.14 Aligned_cols=136 Identities=19% Similarity=0.242 Sum_probs=88.3
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhH
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (481)
...+||+|||||++|+++|+.|++ .|.+|+|||+. .+| |.|......... . ......+.
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~--~G~~v~iiE~~~~~G--------Gtw~~~~ypg~~-------~-dv~s~~y~-- 78 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRS--QGLTVRAFEAASGVG--------GVWYWNRYPGAR-------C-DVESIDYS-- 78 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSC--------THHHHCCCTTCB-------C-SSCTTTSS--
T ss_pred CCCCCEEEECchHHHHHHHHHHHh--CCCCEEEEeCCCCCC--------CccccCCCCCce-------e-CCCchhcc--
Confidence 356899999999999999999999 78999999965 555 444211100000 0 00000100
Q ss_pred HhcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCC--EEEcCceEEEEEecCCCCeEEEEEeec
Q 011610 127 FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGV--VLQTGKVVTTASSDNAGRKFLLKVEKR 204 (481)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv--~i~~~~~V~~i~~~~~~~~~~V~~~~~ 204 (481)
..|.. + .....+. ...| .....+.+.+.+.+++.|+ +++++++|+++..+++.+.|.|++.+
T Consensus 79 -~~f~~-~---~~~~~~~-------~~~~---~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~- 142 (549)
T 4ap3_A 79 -YSFSP-E---LEQEWNW-------SEKY---ATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDR- 142 (549)
T ss_dssp -CCSCH-H---HHHHCCC-------SSSS---CBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETT-
T ss_pred -ccccc-c---cccCCCC-------ccCC---CCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECC-
Confidence 01111 1 1111111 1122 2456788888888999998 89999999999876523478898876
Q ss_pred ccCceEEEEcCeEEEccCC
Q 011610 205 TMNLVECIEADYLLIASGS 223 (481)
Q Consensus 205 ~~~~~~~i~ad~VIlAtG~ 223 (481)
+.++.||+||+|||.
T Consensus 143 ----G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 143 ----GDEVSARFLVVAAGP 157 (549)
T ss_dssp ----CCEEEEEEEEECCCS
T ss_pred ----CCEEEeCEEEECcCC
Confidence 667999999999994
No 95
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.95 E-value=2.8e-09 Score=104.56 Aligned_cols=113 Identities=22% Similarity=0.296 Sum_probs=78.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
+.+||+|||||++|+++|+.|++ .|++|+|+|+..+| |.+..... . ..++ .
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~g--------g~~~~~~~--~------~~~~----~------- 54 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR--ANLQPVLITGMEKG--------GQLTTTTE--V------ENWP----G------- 54 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT--TTCCCEEECCSSTT--------GGGGGCSB--C------CCST----T-------
T ss_pred CcCCEEEECcCHHHHHHHHHHHH--CCCcEEEEccCCCC--------ceEecchh--h------hhCC----C-------
Confidence 35899999999999999999999 78999999976665 33321110 0 0000 0
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
+|.......+.+.+.+.+++.|++++.++ |+.+..++ +.+.| +.+
T Consensus 55 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~--~~~~v-~~~----- 99 (320)
T 1trb_A 55 --------------------------DPNDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQN--RPFRL-NGD----- 99 (320)
T ss_dssp --------------------------CCSSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSS--SSEEE-EES-----
T ss_pred --------------------------CCCCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecC--CEEEE-EeC-----
Confidence 00001234556666777788899999986 98988654 56776 444
Q ss_pred eEEEEcCeEEEccCCCh
Q 011610 209 VECIEADYLLIASGSSQ 225 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g 225 (481)
+..+.+|+||+|||+.+
T Consensus 100 ~~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 100 NGEYTCDALIIATGASA 116 (320)
T ss_dssp SCEEEEEEEEECCCEEE
T ss_pred CCEEEcCEEEECCCCCc
Confidence 56799999999999753
No 96
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.95 E-value=4.2e-09 Score=111.35 Aligned_cols=58 Identities=16% Similarity=0.167 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCCh
Q 011610 161 SSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 161 a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g 225 (481)
..++...+.+.+++.|+++++++.|.++...+ +.+.|.+.+ +..+.+|.|++|+|..+
T Consensus 262 D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~--~~~~v~~~~-----~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 262 DQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD--DKILVEFSD-----KTSELYDTVLYAIGRKG 319 (542)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEET--TEEEEEETT-----SCEEEESEEEECSCEEE
T ss_pred chhHHHHHHHHHHhhcceeecceEEEEEEecC--CeEEEEEcC-----CCeEEEEEEEEcccccC
Confidence 45677888899999999999999999998875 667777765 56788999999999654
No 97
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.94 E-value=9.1e-10 Score=115.50 Aligned_cols=59 Identities=12% Similarity=0.179 Sum_probs=46.4
Q ss_pred eecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccC
Q 011610 155 FPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASG 222 (481)
Q Consensus 155 ~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG 222 (481)
||.......+.++|.+.+.+.|++|+++++|++|..++ +. +++.+ +.++.||+||.++-
T Consensus 215 ~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~--~~--v~~~~-----G~~~~ad~vI~t~P 273 (513)
T 4gde_A 215 FPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANN--KT--VTLQD-----GTTIGYKKLVSTMA 273 (513)
T ss_dssp EESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETTT--TE--EEETT-----SCEEEEEEEEECSC
T ss_pred ecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEccC--CE--EEEcC-----CCEEECCEEEECCC
Confidence 44445567788999998889999999999999998764 43 44555 67899999998764
No 98
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.94 E-value=2.8e-09 Score=105.36 Aligned_cols=116 Identities=18% Similarity=0.310 Sum_probs=81.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHH
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (481)
.++||+|||||++|+++|+.|++ .|++|+|+|+. .+| |.|... ++. ..+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~g--------g~~~~~-------------~~~--~~~~---- 54 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGM--RGLSFRFVDPLPEPG--------GQLTAL-------------YPE--KYIY---- 54 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSC--------HHHHHT-------------CTT--SEEC----
T ss_pred CcCcEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCCCC--------Ceeecc-------------CCC--ceee----
Confidence 35899999999999999999998 78999999965 444 344211 000 0000
Q ss_pred hcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccC
Q 011610 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMN 207 (481)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~ 207 (481)
.+. +. | ......+.+.+.+.+++.+++++++++|..+..++ +.+.|.+.+
T Consensus 55 -~~~-----------~~-----------~-~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~v~~~~---- 104 (335)
T 2zbw_A 55 -DVA-----------GF-----------P-KVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREG--DLFKVTTSQ---- 104 (335)
T ss_dssp -CST-----------TC-----------S-SEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEET--TEEEEEETT----
T ss_pred -ccC-----------CC-----------C-CCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECC--CEEEEEECC----
Confidence 000 00 0 01235566777777888899999999999998765 567787764
Q ss_pred ceEEEEcCeEEEccCCC
Q 011610 208 LVECIEADYLLIASGSS 224 (481)
Q Consensus 208 ~~~~i~ad~VIlAtG~~ 224 (481)
+.++.+|+||+|||+.
T Consensus 105 -g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 105 -GNAYTAKAVIIAAGVG 120 (335)
T ss_dssp -SCEEEEEEEEECCTTS
T ss_pred -CCEEEeCEEEECCCCC
Confidence 5679999999999974
No 99
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.92 E-value=1.6e-08 Score=111.11 Aligned_cols=39 Identities=18% Similarity=0.351 Sum_probs=34.2
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC-CCCCC
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLS 88 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~ 88 (481)
...+||+|||||++|++||+.|++ .|++|+|+|+ +.+|+
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~--~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHN--FGIKVTVLEAKDRIGG 373 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHH--HTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH--CCCcEEEEecccceec
Confidence 346899999999999999999999 6899999995 56664
No 100
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.92 E-value=1.2e-08 Score=107.82 Aligned_cols=72 Identities=22% Similarity=0.368 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCe---EEEEEeecccCceE-EEEcCeEEEccCCChhHHHHHHHcCC
Q 011610 161 SSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRK---FLLKVEKRTMNLVE-CIEADYLLIASGSSQQGHRLAAQLGH 236 (481)
Q Consensus 161 a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~---~~V~~~~~~~~~~~-~i~ad~VIlAtG~~g~g~~la~~~G~ 236 (481)
...+.+.+.+.+++.||+++++++|+++..++ ++. +.|++.+ +. ++.||.||+|+|..+....+++.+|+
T Consensus 254 ~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~-~~~v~~~~v~~~~-----G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl 327 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQGMEIISGSNVTRIEEDA-NGRVQAVVAMTPN-----GEMRIETDFVFLGLGEQPRSAELAKILGL 327 (523)
T ss_dssp SHHHHHHHHHHHHHTTCEEESSCEEEEEEECT-TSBEEEEEEEETT-----EEEEEECSCEEECCCCEECCHHHHHHHTC
T ss_pred cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcC-CCceEEEEEEECC-----CcEEEEcCEEEECcCCccCCccCHHHcCC
Confidence 45677888899999999999999999998754 332 5666654 55 89999999999987643216777787
Q ss_pred Cc
Q 011610 237 SI 238 (481)
Q Consensus 237 ~i 238 (481)
++
T Consensus 328 ~~ 329 (523)
T 1mo9_A 328 DL 329 (523)
T ss_dssp CB
T ss_pred cc
Confidence 65
No 101
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.91 E-value=1.4e-08 Score=106.41 Aligned_cols=101 Identities=18% Similarity=0.210 Sum_probs=66.3
Q ss_pred HHHHHHHhcCCcceeec-CCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEE
Q 011610 134 DTMSWFSDHGVELKTED-DGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECI 212 (481)
Q Consensus 134 ~~~~~~~~~Gi~~~~~~-~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i 212 (481)
++...+...|.+...-. ..++.| .....+.+.+.+.+++.||+++++++|.++..++ +.+.|.+.+...+...++
T Consensus 212 E~A~~l~~~g~~Vtlv~~~~~~l~--~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~i 287 (491)
T 3urh_A 212 ELGSVWARLGAKVTVVEFLDTILG--GMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSG--DGAKVTFEPVKGGEATTL 287 (491)
T ss_dssp HHHHHHHHHTCEEEEECSSSSSSS--SSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTSCCCEEE
T ss_pred HHHHHHHHcCCEEEEEeccccccc--cCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeC--CEEEEEEEecCCCceEEE
Confidence 34455666666544322 223333 2346677888888999999999999999998765 566666653111223689
Q ss_pred EcCeEEEccCCChhHHHH-HHHcCCCc
Q 011610 213 EADYLLIASGSSQQGHRL-AAQLGHSI 238 (481)
Q Consensus 213 ~ad~VIlAtG~~g~g~~l-a~~~G~~i 238 (481)
.+|.||+|+|-.+....+ ++..|+.+
T Consensus 288 ~~D~Vi~a~G~~p~~~~l~l~~~g~~~ 314 (491)
T 3urh_A 288 DAEVVLIATGRKPSTDGLGLAKAGVVL 314 (491)
T ss_dssp EESEEEECCCCEECCTTSCHHHHTCCB
T ss_pred EcCEEEEeeCCccCCCccCchhcCceE
Confidence 999999999976543222 45556654
No 102
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.91 E-value=1.2e-08 Score=110.26 Aligned_cols=76 Identities=14% Similarity=0.264 Sum_probs=55.9
Q ss_pred ChHHHHHHHHHHHHhCCC--EEEcCceEEEEEecCC--CCeEEEEEeec---ccCceEEEEcCeEEEccCCChhHHHHHH
Q 011610 160 SSSSVIDCLLTEAKHRGV--VLQTGKVVTTASSDNA--GRKFLLKVEKR---TMNLVECIEADYLLIASGSSQQGHRLAA 232 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~Gv--~i~~~~~V~~i~~~~~--~~~~~V~~~~~---~~~~~~~i~ad~VIlAtG~~g~g~~la~ 232 (481)
....+.+.|.+.+++.|+ +|+++++|++++.+++ +..+.|++.+. .++...+++||+||.|+|+.+ .+.+
T Consensus 139 ~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S---~vR~ 215 (639)
T 2dkh_A 139 NQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARS---NVRR 215 (639)
T ss_dssp CHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC---HHHH
T ss_pred CHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcch---HHHH
Confidence 456788899999999987 9999999999987641 12567766520 122236899999999999876 3566
Q ss_pred HcCCCc
Q 011610 233 QLGHSI 238 (481)
Q Consensus 233 ~~G~~i 238 (481)
.+|+..
T Consensus 216 ~lg~~~ 221 (639)
T 2dkh_A 216 AIGRQL 221 (639)
T ss_dssp HTTCCC
T ss_pred HhCCCC
Confidence 777764
No 103
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.91 E-value=7.3e-09 Score=108.91 Aligned_cols=60 Identities=20% Similarity=0.152 Sum_probs=48.3
Q ss_pred ChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCCh
Q 011610 160 SSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g 225 (481)
+...+...|.+.+++.|++++++ +|+++..++++..+.|++.+ +.+++||.||.|+|.++
T Consensus 171 ~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~-----g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 171 DADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQ-----HGEISGDLFVDCTGFRG 230 (511)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESS-----SCEEECSEEEECCGGGC
T ss_pred cHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECC-----CCEEEcCEEEECCCcch
Confidence 56788899999999999999999 99999875412235677765 55799999999999764
No 104
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.91 E-value=1e-08 Score=106.61 Aligned_cols=61 Identities=13% Similarity=0.158 Sum_probs=45.2
Q ss_pred eeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEE---eecccCceEEEEcCeEEEccCCC
Q 011610 153 RVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKV---EKRTMNLVECIEADYLLIASGSS 224 (481)
Q Consensus 153 ~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~---~~~~~~~~~~i~ad~VIlAtG~~ 224 (481)
..+| ......+.+.|.+.+ |++|+++++|++|..++ +.+.|++ .+ +.++.||+||+|++..
T Consensus 230 ~~~~-~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~--~~~~v~~~~~~~-----g~~~~ad~vV~a~~~~ 293 (478)
T 2ivd_A 230 LSTF-DGGLQVLIDALAASL---GDAAHVGARVEGLARED--GGWRLIIEEHGR-----RAELSVAQVVLAAPAH 293 (478)
T ss_dssp EEEE-TTCTHHHHHHHHHHH---GGGEESSEEEEEEECC----CCEEEEEETTE-----EEEEECSEEEECSCHH
T ss_pred EEEE-CCCHHHHHHHHHHHh---hhhEEcCCEEEEEEecC--CeEEEEEeecCC-----CceEEcCEEEECCCHH
Confidence 3444 345667788887765 67999999999998765 4577877 44 5689999999999853
No 105
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.90 E-value=5.4e-09 Score=102.13 Aligned_cols=114 Identities=14% Similarity=0.154 Sum_probs=78.9
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
++||+|||||++|+++|+.|++ .|++|+|+|+. .| |.|.... ... .+..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~--~g~~v~li~~~-~g--------G~~~~~~--~~~------~~~~------------ 49 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSAR--KGIRTGLMGER-FG--------GQILDTV--DIE------NYIS------------ 49 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT--TTCCEEEECSS-TT--------GGGGGCC--EEC------CBTT------------
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCcEEEEeCC-CC--------ceecccc--ccc------cccC------------
Confidence 3799999999999999999999 78999999853 33 3332110 000 0000
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCC-CCeEEEEEeecccCc
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNA-GRKFLLKVEKRTMNL 208 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~-~~~~~V~~~~~~~~~ 208 (481)
..+ .....+.+.+.+.+++.|++++.+++|+.+..+.+ ++.+.|.+++
T Consensus 50 -----------------------~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~----- 98 (310)
T 1fl2_A 50 -----------------------VPK---TEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETAS----- 98 (310)
T ss_dssp -----------------------BSS---EEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETT-----
T ss_pred -----------------------cCC---CCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECC-----
Confidence 000 01234566677778888999999999999975420 1367888765
Q ss_pred eEEEEcCeEEEccCCCh
Q 011610 209 VECIEADYLLIASGSSQ 225 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g 225 (481)
+.++.+|+||+|||+.+
T Consensus 99 g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 99 GAVLKARSIIVATGAKW 115 (310)
T ss_dssp SCEEEEEEEEECCCEEE
T ss_pred CCEEEeCEEEECcCCCc
Confidence 56799999999999753
No 106
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.90 E-value=3.9e-09 Score=109.21 Aligned_cols=54 Identities=15% Similarity=0.251 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCC
Q 011610 161 SSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS 223 (481)
Q Consensus 161 a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~ 223 (481)
...+.+.|.+.+.+ ++|+++++|++|+.++ +.+.|++.+ +.++.||+||+|+..
T Consensus 234 ~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~~~v~~~~-----g~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 234 LQTLVEEIEKQLKL--TKVYKGTKVTKLSHSG--SCYSLELDN-----GVTLDADSVIVTAPH 287 (470)
T ss_dssp THHHHHHHHHTCCS--EEEECSCCEEEEEECS--SSEEEEESS-----SCEEEESEEEECSCH
T ss_pred HHHHHHHHHHhcCC--CEEEeCCceEEEEEcC--CeEEEEECC-----CCEEECCEEEECCCH
Confidence 44555555554432 7999999999999875 568888875 567999999999974
No 107
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.90 E-value=9.4e-09 Score=104.93 Aligned_cols=63 Identities=19% Similarity=0.173 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHHHh-CC-CEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChh
Q 011610 161 SSSVIDCLLTEAKH-RG-VVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQ 226 (481)
Q Consensus 161 a~~~~~~l~~~~~~-~G-v~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~ 226 (481)
...+.+.|.+.+.+ .| ++|+++++|++++. + +.+.|++.+..++...+++||.||.|+|..+.
T Consensus 106 r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~--~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 106 RGELQMILLAAVRERLGQQAVRTGLGVERIEE-R--DGRVLIGARDGHGKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp HHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-E--TTEEEEEEEETTSCEEEEEESEEEECCCTTCH
T ss_pred HHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-C--CccEEEEecCCCCCceEEecCEEEECCCccch
Confidence 45777888888876 36 58999999999987 5 44666665311122257999999999998764
No 108
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.90 E-value=1.1e-09 Score=114.39 Aligned_cols=145 Identities=21% Similarity=0.257 Sum_probs=80.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC-CCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHH
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (481)
.++||+|||||++|+++|+.|++ .|++|+|||+ +.+| |.| .+..+.+... +...
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~--~G~~V~liE~~~~~G--------G~~--~~~g~~psk~-----------ll~~-- 59 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAAD--EGLKVAIVERYKTLG--------GVC--LNVGCIPSKA-----------LLHN-- 59 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSCSS--------HHH--HHHSHHHHHH-----------HHHH--
T ss_pred CcCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCC--------Cce--eeecccchHH-----------HHHH--
Confidence 46899999999999999999999 7999999997 4555 455 2222222111 1100
Q ss_pred hcCChHHHHHHHHhcCCcceeecCC--eeeec-CCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeec
Q 011610 128 SLHGPMDTMSWFSDHGVELKTEDDG--RVFPV-SDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKR 204 (481)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g--~~~p~-~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~ 204 (481)
....+..+++...|+++...... .+... ......+...+...+++.|++++.++.+. + ++ +.+.|.+.+.
T Consensus 60 --~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~--~~v~v~~~~g 132 (482)
T 1ojt_A 60 --AAVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF-L--DP--HHLEVSLTAG 132 (482)
T ss_dssp --HHHHHHHHHGGGGTCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-E--ET--TEEEEEEEEE
T ss_pred --HHHHHHHHHHHhCCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE-c--cC--CEEEEEecCC
Confidence 00011223344455443211000 00000 00011233345566778899999988654 2 32 5566665430
Q ss_pred -------ccCceEEEEcCeEEEccCCCh
Q 011610 205 -------TMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 205 -------~~~~~~~i~ad~VIlAtG~~g 225 (481)
.++...++++|+||+|||+.+
T Consensus 133 ~~~~~~~~~g~~~~i~ad~lViAtGs~p 160 (482)
T 1ojt_A 133 DAYEQAAPTGEKKIVAFKNCIIAAGSRV 160 (482)
T ss_dssp EETTEEEEEEEEEEEEEEEEEECCCEEE
T ss_pred cccccccccCcceEEEcCEEEECCCCCC
Confidence 000115799999999999864
No 109
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.89 E-value=9.5e-09 Score=107.48 Aligned_cols=60 Identities=13% Similarity=0.066 Sum_probs=50.3
Q ss_pred cCCChHHHHHHHHHHHHhCC-CEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCC
Q 011610 157 VSDSSSSVIDCLLTEAKHRG-VVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS 223 (481)
Q Consensus 157 ~~~~a~~~~~~l~~~~~~~G-v~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~ 223 (481)
.......+.+.|.+.+.+.| ++|+++++|++|..++ +.+.|++.+ +.++.||+||+|+|.
T Consensus 250 ~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~--~~v~v~~~~-----g~~~~ad~vI~a~~~ 310 (495)
T 2vvm_A 250 FKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNER--DAARVTARD-----GREFVAKRVVCTIPL 310 (495)
T ss_dssp ETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECS--SSEEEEETT-----CCEEEEEEEEECCCG
T ss_pred eCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcC--CEEEEEECC-----CCEEEcCEEEECCCH
Confidence 34567788899999999998 9999999999998765 567787765 557999999999995
No 110
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.87 E-value=1.7e-08 Score=107.31 Aligned_cols=60 Identities=22% Similarity=0.199 Sum_probs=48.1
Q ss_pred ChHHHHHHHHHHHHhC-CCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCCh
Q 011610 160 SSSSVIDCLLTEAKHR-GVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~-Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g 225 (481)
+...+...|.+.+++. ||+++++ +|+++..++++..+.|++.+ +.++.||.||+|+|..+
T Consensus 192 ~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~-----G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 192 DAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTAT-----GRVFDADLFVDCSGFRG 252 (550)
T ss_dssp CHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETT-----SCEEECSEEEECCGGGC
T ss_pred cHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECC-----CCEEECCEEEECCCCch
Confidence 5677889999999988 9999999 99999875412235677764 56799999999999754
No 111
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.87 E-value=3.3e-09 Score=107.92 Aligned_cols=54 Identities=19% Similarity=0.226 Sum_probs=39.8
Q ss_pred CCcccccccCCCCeEEEEEEeecccCcchHHHHHHHHHHHHHHHHHhHHhhHhhhh
Q 011610 422 ISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSNDATLK 477 (481)
Q Consensus 422 i~~~t~esk~~~gLy~~GE~ldv~g~~GGynl~~A~~sG~~AG~~aa~~~~~~~~~ 477 (481)
+|+.||+++.+||+|++|++.+... .. -.-+.|...|.++++++......+++.
T Consensus 276 VD~~tl~~t~~p~VfAiGDva~~~~-~p-k~a~~A~~qa~v~A~ni~~~l~G~~~~ 329 (401)
T 3vrd_B 276 VDIRTFESSLQPGIHVIGDACNAAP-MP-KSAYSANSQAKVAAAAVVALLKGEEPG 329 (401)
T ss_dssp BCTTTCBBSSSTTEEECGGGBCCTT-SC-BSHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred ECCCcceecCCCCEEEecccccCCC-CC-chHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 5567899999999999995543211 11 234789999999999998887766553
No 112
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.87 E-value=4e-09 Score=110.00 Aligned_cols=38 Identities=26% Similarity=0.330 Sum_probs=34.6
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCC
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPL 87 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g 87 (481)
..++||+|||||++|++||+.|++ .|++|+|||++..|
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~--~G~~V~liE~~~~G 55 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAE--LGARAAVVESHKLG 55 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh--CCCeEEEEecCCCC
Confidence 346999999999999999999999 79999999988776
No 113
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.86 E-value=9.3e-09 Score=109.00 Aligned_cols=135 Identities=20% Similarity=0.216 Sum_probs=87.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHH
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (481)
.++||+|||||++|+++|+.|++ .|.+|+|||+. .+| |.|+... |+....+.... .
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~--~g~~v~iiE~~~~~G--------Gtw~~~~------------yPg~~~d~~~~-~ 64 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ--AGMKVLGIEAGEDVG--------GTWYWNR------------YPGCRLDTESY-A 64 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSC--------THHHHCC------------CTTCBCSSCHH-H
T ss_pred CCCCEEEECccHHHHHHHHHHHh--CCCCEEEEeCCCCCC--------CccccCC------------CCceeecCchh-h
Confidence 46899999999999999999999 78999999965 555 4443211 11111011000 0
Q ss_pred hcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCC--EEEcCceEEEEEecCCCCeEEEEEeecc
Q 011610 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGV--VLQTGKVVTTASSDNAGRKFLLKVEKRT 205 (481)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv--~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 205 (481)
..+ .+....--.+ .....| .....+...+...+++.|+ .++++++|+++..+++++.|.|++++
T Consensus 65 y~~------~f~~~~~~~~---~~~~~~---~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~-- 130 (545)
T 3uox_A 65 YGY------FALKGIIPEW---EWSENF---ASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDN-- 130 (545)
T ss_dssp HCH------HHHTTSSTTC---CCSBSS---CBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETT--
T ss_pred ccc------ccCcccccCC---CccccC---CCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECC--
Confidence 000 0000000000 001222 2456777888888888887 89999999999876423578898876
Q ss_pred cCceEEEEcCeEEEccCC
Q 011610 206 MNLVECIEADYLLIASGS 223 (481)
Q Consensus 206 ~~~~~~i~ad~VIlAtG~ 223 (481)
+.+++||+||+|||.
T Consensus 131 ---G~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 131 ---EEVVTCRFLISATGP 145 (545)
T ss_dssp ---TEEEEEEEEEECCCS
T ss_pred ---CCEEEeCEEEECcCC
Confidence 678999999999994
No 114
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.86 E-value=1.1e-09 Score=113.58 Aligned_cols=140 Identities=21% Similarity=0.227 Sum_probs=80.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
+++||+|||||++|++||..|++ .|++|+|+|+..+| |.| .+..+.+...+. ...
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~~~g--------G~~--~~~g~~p~k~l~-----------~~~-- 56 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQ--LGQKVTIVEKGNLG--------GVC--LNVGCIPSKALI-----------SAS-- 56 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTT--------HHH--HHTSHHHHHHHH-----------HHH--
T ss_pred CcCCEEEECCCHHHHHHHHHHHh--CCCeEEEEECCCCC--------CcC--cCcCchhhHHHH-----------HHH--
Confidence 35899999999999999999999 68999999987654 555 233332211111 000
Q ss_pred cCChHHHHHHHHhcCCcceeec--CCeeeecC-CChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecc
Q 011610 129 LHGPMDTMSWFSDHGVELKTED--DGRVFPVS-DSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRT 205 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~--~g~~~p~~-~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 205 (481)
...+...++...|+...... ...+++.. .-...+.+.+.+.+++.|++++.++.+. + +. +.+.|.+.+
T Consensus 57 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-i--d~--~~v~V~~~~-- 127 (455)
T 1ebd_A 57 --HRYEQAKHSEEMGIKAENVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF-V--DA--NTVRVVNGD-- 127 (455)
T ss_dssp --HHHHHHHTCGGGTEECCSCEECHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE-E--ET--TEEEEEETT--
T ss_pred --HHHHHHHHHHhcCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-c--cC--CeEEEEeCC--
Confidence 00011112222333211000 00000000 0011234455667778899999998654 3 32 557776654
Q ss_pred cCce-EEEEcCeEEEccCCCh
Q 011610 206 MNLV-ECIEADYLLIASGSSQ 225 (481)
Q Consensus 206 ~~~~-~~i~ad~VIlAtG~~g 225 (481)
+ .++.+|+||+|||+.+
T Consensus 128 ---G~~~i~~d~lViATGs~p 145 (455)
T 1ebd_A 128 ---SAQTYTFKNAIIATGSRP 145 (455)
T ss_dssp ---EEEEEECSEEEECCCEEE
T ss_pred ---CcEEEEeCEEEEecCCCC
Confidence 4 6799999999999754
No 115
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.85 E-value=6.9e-09 Score=107.42 Aligned_cols=71 Identities=15% Similarity=0.226 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHH-HHHcCCCc
Q 011610 162 SSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRL-AAQLGHSI 238 (481)
Q Consensus 162 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~l-a~~~G~~i 238 (481)
..+.+.+.+.+++.|++++++++|.++..++ ++.+.|++.+ +.++.+|.||+|+|..+....+ ++.+|+++
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~-----g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~ 279 (450)
T 1ges_A 208 PMISETLVEVMNAEGPQLHTNAIPKAVVKNT-DGSLTLELED-----GRSETVDCLIWAIGREPANDNINLEAAGVKT 279 (450)
T ss_dssp HHHHHHHHHHHHHHSCEEECSCCEEEEEECT-TSCEEEEETT-----SCEEEESEEEECSCEEESCTTSCHHHHTCCB
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-CcEEEEEECC-----CcEEEcCEEEECCCCCcCCCCCCchhcCceE
Confidence 4567778888889999999999999998754 3446777765 5689999999999976543223 45566654
No 116
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.85 E-value=2.7e-09 Score=113.01 Aligned_cols=59 Identities=25% Similarity=0.175 Sum_probs=48.1
Q ss_pred ChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCC-eEEEEEeecccCceEEEEcCeEEEccCCCh
Q 011610 160 SSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGR-KFLLKVEKRTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~-~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g 225 (481)
+...+...|.+.+++.|++++.+ +|+++..++ ++ .+.|++.+ +.+++||.||+|+|..+
T Consensus 163 ~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~-~g~~~~v~~~~-----g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 163 DAHLVADFLKRWAVERGVNRVVD-EVVDVRLNN-RGYISNLLTKE-----GRTLEADLFIDCSGMRG 222 (538)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECT-TSCEEEEEETT-----SCEECCSEEEECCGGGC
T ss_pred eHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcC-CCcEEEEEECC-----CcEEEeCEEEECCCCch
Confidence 56788899999999999999999 899998764 33 35677664 45799999999999754
No 117
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.84 E-value=2.1e-08 Score=105.88 Aligned_cols=59 Identities=12% Similarity=0.106 Sum_probs=46.8
Q ss_pred ChHHHHHHHHHHHHh-CCCEEEcCceEEEEEecCCCC-eEEEEEeecccCceEEEEcCeEEEccCCCh
Q 011610 160 SSSSVIDCLLTEAKH-RGVVLQTGKVVTTASSDNAGR-KFLLKVEKRTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~-~Gv~i~~~~~V~~i~~~~~~~-~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g 225 (481)
....+...|.+.+++ .|++++++ +|+++..++ ++ .+.|++.+ +.+++||.||.|+|.++
T Consensus 173 ~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~-~g~~~~v~~~~-----g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 173 NAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQ-HGDIEKLITKQ-----NGEISGQLFIDCTGAKS 233 (526)
T ss_dssp CHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECT-TSCEEEEEESS-----SCEEECSEEEECSGGGC
T ss_pred cHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecC-CCcEEEEEECC-----CCEEEcCEEEECCCcch
Confidence 567788899999998 89999999 699998764 23 34666654 45699999999999754
No 118
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.84 E-value=8e-09 Score=107.45 Aligned_cols=142 Identities=20% Similarity=0.267 Sum_probs=79.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHH
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (481)
.++||+|||||++|+++|+.|++ .|++|+|+|+. .+| |.| .+..+.+... +....
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~--~g~~V~liE~~~~~G--------G~~--~~~g~~p~k~-----------l~~~~- 60 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQ--LGFKTTCIEKRGALG--------GTC--LNVGCIPSKA-----------LLHSS- 60 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH--HTCCEEEEECSSSSC--------CSH--HHHSHHHHHH-----------HHHHH-
T ss_pred ccCCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCcc--------ccc--cCcCccchHH-----------HHHHH-
Confidence 46899999999999999999999 68999999976 565 555 2322222111 11000
Q ss_pred hcCChHHHHHH-HHhcCCcceeec--CCeeeecC-CChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEee
Q 011610 128 SLHGPMDTMSW-FSDHGVELKTED--DGRVFPVS-DSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEK 203 (481)
Q Consensus 128 ~~~~~~~~~~~-~~~~Gi~~~~~~--~g~~~p~~-~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~ 203 (481)
. ..+.... +...|+...... ...+++.. .-...+...+.+.+++.|++++.++.+. + +. +.+.|.+.+
T Consensus 61 ~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~--~~~~v~~~~ 132 (470)
T 1dxl_A 61 H---MYHEAKHSFANHGVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-V--SP--SEISVDTIE 132 (470)
T ss_dssp H---HHHHHHHTHHHHTEEESCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-E--ET--TEEEECCSS
T ss_pred H---HHHHHHHHHHhcCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cC--CEEEEEeCC
Confidence 0 0011111 233444311100 00000000 0011233345566677899999998664 3 32 556665543
Q ss_pred cccCceEEEEcCeEEEccCCCh
Q 011610 204 RTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 204 ~~~~~~~~i~ad~VIlAtG~~g 225 (481)
+....+++|+||+|||+.+
T Consensus 133 ---G~~~~i~~d~lIiAtGs~p 151 (470)
T 1dxl_A 133 ---GENTVVKGKHIIIATGSDV 151 (470)
T ss_dssp ---SCCEEEECSEEEECCCEEE
T ss_pred ---CceEEEEcCEEEECCCCCC
Confidence 1116799999999999754
No 119
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.83 E-value=3.4e-08 Score=101.03 Aligned_cols=71 Identities=18% Similarity=0.219 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 161 SSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 161 a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
...+.+.+.+.+++.||+++++++|.++..++ +....|++.+ +.++.||.||+|+|..+.. .+++.+|+.+
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~v~l~d-----G~~i~aD~Vv~a~G~~p~~-~l~~~~gl~~ 263 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG-TKVTGVRMQD-----GSVIPADIVIVGIGIVPCV-GALISAGASG 263 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESS-SBEEEEEESS-----SCEEECSEEEECSCCEESC-HHHHHTTCCC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecC-CcEEEEEeCC-----CCEEEcCEEEECCCCccCh-HHHHhCCCCc
Confidence 46777888889999999999999999998764 3445788876 6789999999999987653 4677777764
No 120
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.82 E-value=4.2e-08 Score=102.44 Aligned_cols=63 Identities=16% Similarity=0.167 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCCh
Q 011610 162 SSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 162 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g 225 (481)
.++.+.+.+.+++.||+++++++|.+++.++ ++.+.|++.+...+...++.+|.||+|+|..+
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQD-DGKLLVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECT-TSCEEEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCcEEEEEecCCCCceeEEEcCEEEECccccc
Confidence 4566778888899999999999999998754 34566777652223345799999999999654
No 121
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.80 E-value=4.2e-08 Score=103.34 Aligned_cols=56 Identities=18% Similarity=0.217 Sum_probs=43.2
Q ss_pred CChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCC
Q 011610 159 DSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSS 224 (481)
Q Consensus 159 ~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~ 224 (481)
.....+.+.|.+.+ |++|+++++|++|..++ +.+.|++.+ +.++.||+||+|++..
T Consensus 212 gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~--~~v~v~~~~-----g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 212 GGSGQVSERIMDLL---GDRVKLERPVIYIDQTR--ENVLVETLN-----HEMYEAKYVISAIPPT 267 (520)
T ss_dssp TCTHHHHHHHHHHH---GGGEESSCCEEEEECSS--SSEEEEETT-----SCEEEESEEEECSCGG
T ss_pred CCHHHHHHHHHHHc---CCcEEcCCeeEEEEECC--CeEEEEECC-----CeEEEeCEEEECCCHH
Confidence 34556666666544 78999999999998765 557787765 5689999999999853
No 122
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.80 E-value=1.2e-08 Score=106.03 Aligned_cols=138 Identities=22% Similarity=0.245 Sum_probs=78.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
++||+|||||++|+++|+.|++ .|++|+|+|+...| |.| .+..+.+...+... ..++
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~--~G~~V~liE~~~~g--------G~~--~~~g~~psk~ll~~-----~~~~------ 59 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ--LGLSTAIVEPKYWG--------GVC--LNVGCIPSKALLRN-----AELV------ 59 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSCTT--------HHH--HHHSHHHHHHHHHH-----HHHH------
T ss_pred cCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCC--------Ccc--cccCchhhHHHHHH-----HHHH------
Confidence 4799999999999999999999 78999999987554 444 22222221111100 0000
Q ss_pred CChHHHHHHHHhcCCcceeecCCee-eecC-----CChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEee
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRV-FPVS-----DSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEK 203 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~-~p~~-----~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~ 203 (481)
..+...+...|+. . .... ++.. .-...+...+.+.+++.|++++.++.+. .+ .+.+.|.+.+
T Consensus 60 ---~~~~~~~~~~g~~---~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~---id--~~~v~V~~~~ 127 (464)
T 2a8x_A 60 ---HIFTKDAKAFGIS---G-EVTFDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF---AD--ANTLLVDLND 127 (464)
T ss_dssp ---HHHHHHTTTTTEE---E-CCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE---SS--SSEEEEEETT
T ss_pred ---HHHHHHHHhcCCC---C-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ec--CCeEEEEeCC
Confidence 0011111222322 0 0000 0000 0011233445667778899999887654 23 3567776653
Q ss_pred cccCceEEEEcCeEEEccCCCh
Q 011610 204 RTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 204 ~~~~~~~~i~ad~VIlAtG~~g 225 (481)
+...++.+|+||+|||+.+
T Consensus 128 ---G~~~~~~~d~lViAtG~~~ 146 (464)
T 2a8x_A 128 ---GGTESVTFDNAIIATGSST 146 (464)
T ss_dssp ---SCCEEEEEEEEEECCCEEE
T ss_pred ---CceEEEEcCEEEECCCCCC
Confidence 1116899999999999754
No 123
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.79 E-value=4.7e-08 Score=98.87 Aligned_cols=70 Identities=17% Similarity=0.237 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 161 SSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 161 a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
...+.+.+.+.+++.|++++++++|.++..++ +.+.|++.+ +.++.+|.||+|+|..+.. .+++.+|+++
T Consensus 186 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~-----g~~i~~d~vv~a~G~~p~~-~l~~~~g~~~ 255 (384)
T 2v3a_A 186 HPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG--EGLEAHLSD-----GEVIPCDLVVSAVGLRPRT-ELAFAAGLAV 255 (384)
T ss_dssp CHHHHHHHHHHHHTTTCEEEESCCEEEEEEET--TEEEEEETT-----SCEEEESEEEECSCEEECC-HHHHHTTCCB
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEecC--CEEEEEECC-----CCEEECCEEEECcCCCcCH-HHHHHCCCCC
Confidence 45677888899999999999999999998764 567777765 5689999999999976653 3677888765
No 124
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.79 E-value=1.3e-08 Score=105.96 Aligned_cols=141 Identities=19% Similarity=0.192 Sum_probs=78.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
++||+|||||++|++||+.|++ .|++|+|+|+. .+| |.|. |..+.+...+ ....
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~~~~G--------G~~~--~~g~~psk~l-----------~~~~-- 56 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ--LGMKTACVEKRGALG--------GTCL--NVGCIPSKAL-----------LHAT-- 56 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSS--------HHHH--HHSHHHHHHH-----------HHHH--
T ss_pred CCCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCcC--------CcCC--CcCcHhHHHH-----------HHHH--
Confidence 5899999999999999999999 78999999976 565 5563 3222221111 1000
Q ss_pred cCChHHHHHH-HHhcCCcce-e--ecCCeeeecC-CChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEee
Q 011610 129 LHGPMDTMSW-FSDHGVELK-T--EDDGRVFPVS-DSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEK 203 (481)
Q Consensus 129 ~~~~~~~~~~-~~~~Gi~~~-~--~~~g~~~p~~-~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~ 203 (481)
...+.... +...|++.. . .+...++... .-...+...+.+.+++.|++++.++.+. + +. +.+.|.+.+
T Consensus 57 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~-i--~~--~~~~v~~~~ 129 (468)
T 2qae_A 57 --HLYHDAHANFARYGLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSF-E--TA--HSIRVNGLD 129 (468)
T ss_dssp --HHHHHHHHTHHHHTEECGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEE-E--ET--TEEEEEETT
T ss_pred --HHHHHHHHHHHhcCcccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-e--eC--CEEEEEecC
Confidence 00011111 233444320 0 0000000000 0001123334556677899999887553 3 22 556676643
Q ss_pred cccCceEEEEcCeEEEccCCCh
Q 011610 204 RTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 204 ~~~~~~~~i~ad~VIlAtG~~g 225 (481)
+....+.+|+||+|||+.+
T Consensus 130 ---G~~~~~~~d~lviAtG~~p 148 (468)
T 2qae_A 130 ---GKQEMLETKKTIIATGSEP 148 (468)
T ss_dssp ---SCEEEEEEEEEEECCCEEE
T ss_pred ---CceEEEEcCEEEECCCCCc
Confidence 1116799999999999754
No 125
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.79 E-value=3.5e-08 Score=104.04 Aligned_cols=115 Identities=15% Similarity=0.199 Sum_probs=81.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
..+||+|||||++|++||+.|++ .|++|+|+|+. .| |.|..+. ..+ .+..
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~--~G~~v~lie~~-~G--------G~~~~~~--~~~------~~~~----------- 260 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSAR--KGIRTGLMGER-FG--------GQVLDTV--DIE------NYIS----------- 260 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSS-TT--------GGGTTCS--CBC------CBTT-----------
T ss_pred CcccEEEECCcHHHHHHHHHHHh--CCCeEEEEECC-CC--------Ccccccc--ccc------ccCC-----------
Confidence 46899999999999999999999 79999999952 33 4442111 000 0000
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCC-CCeEEEEEeecccC
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNA-GRKFLLKVEKRTMN 207 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~-~~~~~V~~~~~~~~ 207 (481)
+ | ......+.+.+.+.+++.|++++.+++|+.+..+.. ++.+.|.+.+
T Consensus 261 -~-------------------------~-~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~---- 309 (521)
T 1hyu_A 261 -V-------------------------P-KTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETAS---- 309 (521)
T ss_dssp -B-------------------------S-SBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETT----
T ss_pred -C-------------------------C-CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECC----
Confidence 0 0 012345666777788889999999999999975420 2367888765
Q ss_pred ceEEEEcCeEEEccCCCh
Q 011610 208 LVECIEADYLLIASGSSQ 225 (481)
Q Consensus 208 ~~~~i~ad~VIlAtG~~g 225 (481)
+..+.+|+||+|||+.+
T Consensus 310 -g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 310 -GAVLKARSIIIATGAKW 326 (521)
T ss_dssp -SCEEEEEEEEECCCEEE
T ss_pred -CCEEEcCEEEECCCCCc
Confidence 56899999999999753
No 126
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.79 E-value=1.2e-08 Score=106.53 Aligned_cols=37 Identities=27% Similarity=0.344 Sum_probs=33.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPL 87 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g 87 (481)
.++||+|||||++|+++|+.|++ .|.+|+|||++..|
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~--~g~~V~liE~~~~G 46 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS--YGAKTLLVEAKALG 46 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TSCCEEEEESSCTT
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH--CCCcEEEEeCCCcC
Confidence 46899999999999999999999 79999999987655
No 127
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.79 E-value=2.2e-08 Score=104.04 Aligned_cols=70 Identities=14% Similarity=0.126 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceE-EEEcCeEEEccCCChhHHHH-HHHcCCCc
Q 011610 162 SSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVE-CIEADYLLIASGSSQQGHRL-AAQLGHSI 238 (481)
Q Consensus 162 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~-~i~ad~VIlAtG~~g~g~~l-a~~~G~~i 238 (481)
..+.+.+.+.+++.|++++++++|.++..++ +.+.|++.+ +. ++.+|.||+|+|..+....+ ++.+|+++
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~-----G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~ 278 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALERDA--QGTTLVAQD-----GTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEV 278 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEEET--TEEEEEETT-----CCEEEEESEEEECSCEEESCTTSCHHHHTCCC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CeEEEEEeC-----CcEEEEcCEEEECCCCCcCCCCCCchhcCCcc
Confidence 4566778888899999999999999998754 446777765 55 79999999999976543222 45556554
No 128
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.78 E-value=5e-08 Score=103.83 Aligned_cols=75 Identities=20% Similarity=0.228 Sum_probs=49.8
Q ss_pred HHHHHHHhCCCEEEcCceEEEEEec----CCCCeEEEEEeecccCceEEEEcC-eEEEccCCChhH----------HHHH
Q 011610 167 CLLTEAKHRGVVLQTGKVVTTASSD----NAGRKFLLKVEKRTMNLVECIEAD-YLLIASGSSQQG----------HRLA 231 (481)
Q Consensus 167 ~l~~~~~~~Gv~i~~~~~V~~i~~~----~~~~~~~V~~~~~~~~~~~~i~ad-~VIlAtG~~g~g----------~~la 231 (481)
.|...+.+.+++|++++.|++|..+ + +...+|+..+ ..+...++.|+ -||+|+|+-++- ...+
T Consensus 232 yL~p~~~r~NL~V~t~a~V~rIl~d~~~~~-~ra~GV~~~~-~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp~~~L 309 (583)
T 3qvp_A 232 WLLPNYQRPNLQVLTGQYVGKVLLSQNGTT-PRAVGVEFGT-HKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSIL 309 (583)
T ss_dssp HTTTTTTCTTEEEECSCEEEEEEEECSSSS-CEEEEEEEES-STTCEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHH
T ss_pred HHHHhhcCCCcEEEcCCEEEEEEeccCCCC-CEEEEEEEEe-cCCcEEEEEECCEEEEeCCccCCHHHHHHcCCCCHHHH
Confidence 3433445679999999999999886 3 3456777652 13334678897 599999974331 2456
Q ss_pred HHcCCCcccCCC
Q 011610 232 AQLGHSIVDPVP 243 (481)
Q Consensus 232 ~~~G~~i~~~~p 243 (481)
+++|+++..-.|
T Consensus 310 ~~~GI~vv~dLP 321 (583)
T 3qvp_A 310 EPLGIDTVVDLP 321 (583)
T ss_dssp GGGTCCCSBCCC
T ss_pred HhCCCCceeeCc
Confidence 677877653333
No 129
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.78 E-value=1.7e-09 Score=108.56 Aligned_cols=37 Identities=27% Similarity=0.425 Sum_probs=33.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPL 87 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g 87 (481)
+++||+|||||++|+++|++|++ .|.+|+|||+..++
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~--~G~~V~vle~~~~~ 41 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILAR--KGYSVHILARDLPE 41 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHh--CCCEEEEEeccCCC
Confidence 46899999999999999999999 79999999987655
No 130
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.78 E-value=7.5e-09 Score=104.88 Aligned_cols=54 Identities=15% Similarity=0.016 Sum_probs=41.8
Q ss_pred CCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCC
Q 011610 175 RGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHS 237 (481)
Q Consensus 175 ~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~ 237 (481)
.+..|+++++|++++..+ ++.+.|++.+ +.+++||.||.|+|..+. +-+.++..
T Consensus 122 ~~~~v~~~~~v~~~~~~~-~~~v~v~~~d-----G~~~~adlvVgADG~~S~---vR~~l~~~ 175 (412)
T 4hb9_A 122 LANTIQWNKTFVRYEHIE-NGGIKIFFAD-----GSHENVDVLVGADGSNSK---VRKQYLPF 175 (412)
T ss_dssp CTTTEECSCCEEEEEECT-TSCEEEEETT-----SCEEEESEEEECCCTTCH---HHHHHSTT
T ss_pred ccceEEEEEEEEeeeEcC-CCeEEEEECC-----CCEEEeeEEEECCCCCcc---hHHHhCCC
Confidence 456799999999998765 4678888887 778999999999998763 34444443
No 131
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.78 E-value=8.2e-09 Score=107.37 Aligned_cols=37 Identities=38% Similarity=0.527 Sum_probs=33.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEe-CCCCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIE-KGKPL 87 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE-~~~~g 87 (481)
+++||+|||||++|++||+.|++ .|++|+||| ++.+|
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~--~G~~V~liEk~~~~G 40 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAK--AKYNVLMADPKGELG 40 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECTTSSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHh--CCCeEEEEECCCCCC
Confidence 35899999999999999999999 799999999 55665
No 132
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.78 E-value=4.1e-08 Score=100.07 Aligned_cols=71 Identities=13% Similarity=0.203 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 161 SSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 161 a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
...+.+.+.+.+++.||+++++++|.++..++ +....|++.+ +.++.||.||+|+|..+.. .+++.+|+.+
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~V~~~d-----G~~i~aD~Vv~a~G~~p~~-~l~~~~gl~~ 253 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEG-DRVTGVVLSD-----GNTLPCDLVVVGVGVIPNV-EIAAAAGLPT 253 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETT-----SCEEECSEEEECCCEEECC-HHHHHTTCCB
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEecC-CcEEEEEeCC-----CCEEEcCEEEECcCCccCH-HHHHhCCCCC
Confidence 45677888889999999999999999998764 3445677776 6789999999999976543 4677788765
No 133
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.77 E-value=7e-08 Score=99.87 Aligned_cols=82 Identities=9% Similarity=0.107 Sum_probs=56.7
Q ss_pred HHHHHHhcCCcceee-cCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEE
Q 011610 135 TMSWFSDHGVELKTE-DDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIE 213 (481)
Q Consensus 135 ~~~~~~~~Gi~~~~~-~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ 213 (481)
+...+...|.+...- ...++.|. .-...+.+.+.+.+++.||+++++++|++++..+ +.+.|.+++ + ++.
T Consensus 162 ~A~~l~~~g~~Vtlv~~~~~~l~~-~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~v~~~~-----g-~i~ 232 (452)
T 3oc4_A 162 AIDFLVKMKKTVHVFESLENLLPK-YFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETA--NGIVLETSE-----Q-EIS 232 (452)
T ss_dssp HHHHHHHTTCEEEEEESSSSSSTT-TCCHHHHHHHHHHHHTTTEEEEETCCEEEEEECS--SCEEEEESS-----C-EEE
T ss_pred HHHHHHhCCCeEEEEEccCccccc-cCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC--CeEEEEECC-----C-EEE
Confidence 334455566554432 22233321 1246677888899999999999999999998654 445677764 4 899
Q ss_pred cCeEEEccCCCh
Q 011610 214 ADYLLIASGSSQ 225 (481)
Q Consensus 214 ad~VIlAtG~~g 225 (481)
+|.||+|+|..+
T Consensus 233 aD~Vv~A~G~~p 244 (452)
T 3oc4_A 233 CDSGIFALNLHP 244 (452)
T ss_dssp ESEEEECSCCBC
T ss_pred eCEEEECcCCCC
Confidence 999999999654
No 134
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.77 E-value=1.2e-08 Score=106.40 Aligned_cols=35 Identities=31% Similarity=0.462 Sum_probs=32.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (481)
++|||+|||||++|++||+.|++ .|++|+|||+..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~--~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQ--LGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH--HTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHh--CCCEEEEEeCCC
Confidence 46999999999999999999999 689999999763
No 135
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.77 E-value=7.9e-09 Score=109.00 Aligned_cols=150 Identities=17% Similarity=0.193 Sum_probs=78.3
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCC-ceEEecCCceeeccCCCcchhHHhhccCCCChhchhhH
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLS-KVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~-k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (481)
...|||+|||||++|++||+.|++ .|.+|+|||+..... .....-||.| .|..+.+.. .+....
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~--~G~~V~liEk~~~~~~~~~~~~GGtc--~~~GciPsk-----------~l~~~~ 94 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQ--YGKKVMVLDFVTPTPLGTRWGLGGTC--VNVGCIPKK-----------LMHQAA 94 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHH--TTCCEEEECCCCCCTTCCCCCTTCHH--HHHSHHHHH-----------HHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeccCccccccCCCccccc--CCcCccchH-----------HHHHHH
Confidence 346899999999999999999999 799999999743110 0000013556 333333311 111110
Q ss_pred HhcCChHHHHHHHHhcCCcceeecCCeeeecC-CChH----HHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEE
Q 011610 127 FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVS-DSSS----SVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKV 201 (481)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~-~~a~----~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~ 201 (481)
........+..+|+...... ..-++.- .... .+...+...++..+|+++.+. +..+. . ..+.|.+
T Consensus 95 ----~~~~~~~~~~~~g~~~~~~~-~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~-a~~~d--~--~~v~v~~ 164 (519)
T 3qfa_A 95 ----LLGQALQDSRNYGWKVEETV-KHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY-GQFIG--P--HRIKATN 164 (519)
T ss_dssp ----HHHHHHHHHHHTTBCCCSSC-CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEEE--T--TEEEEEC
T ss_pred ----HHHHHHHHHHhcCcccCCcC-ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEee--C--CEEEEEc
Confidence 01122233445554332110 0000000 0001 112223345567899998764 43332 2 4455554
Q ss_pred eecccCceEEEEcCeEEEccCCCh
Q 011610 202 EKRTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 202 ~~~~~~~~~~i~ad~VIlAtG~~g 225 (481)
.+ +...++.+|+||+|||+.+
T Consensus 165 ~~---g~~~~i~~d~lViATGs~p 185 (519)
T 3qfa_A 165 NK---GKEKIYSAERFLIATGERP 185 (519)
T ss_dssp TT---CCCCEEEEEEEEECCCEEE
T ss_pred CC---CCEEEEECCEEEEECCCCc
Confidence 32 1224799999999999754
No 136
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.76 E-value=3e-08 Score=104.06 Aligned_cols=72 Identities=17% Similarity=0.185 Sum_probs=52.6
Q ss_pred hHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEE-EEcCeEEEccCCChhHHHH-HHHcCCCc
Q 011610 161 SSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVEC-IEADYLLIASGSSQQGHRL-AAQLGHSI 238 (481)
Q Consensus 161 a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~-i~ad~VIlAtG~~g~g~~l-a~~~G~~i 238 (481)
...+.+.+.+.+++.||+++++++|+++..++ ++.+.|++.+ +.+ +.+|.||+|+|..+....+ ++.+|+++
T Consensus 216 d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~~~v~~~~-----g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~ 289 (500)
T 1onf_A 216 DESVINVLENDMKKNNINIVTFADVVEIKKVS-DKNLSIHLSD-----GRIYEHFDHVIYCVGRSPDTENLKLEKLNVET 289 (500)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-TTCEEEEETT-----SCEEEEESEEEECCCBCCTTTTSSCTTTTCCB
T ss_pred chhhHHHHHHHHHhCCCEEEECCEEEEEEEcC-CceEEEEECC-----CcEEEECCEEEECCCCCcCCCCCCchhcCccc
Confidence 35667788888999999999999999998754 3446677664 455 9999999999976643223 34455543
No 137
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.76 E-value=1e-08 Score=106.90 Aligned_cols=140 Identities=22% Similarity=0.313 Sum_probs=78.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC-CCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHH
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (481)
.++||+|||||++|+++|+.|++ .|++|+|+|+ +.+| |.| .+..+.+...+.. ..
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~--~G~~V~liE~~~~~G--------G~~--~~~g~~psk~l~~-----------~~- 59 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQ--LGFNTACVEKRGKLG--------GTC--LNVGCIPSKALLN-----------NS- 59 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSS--------HHH--HHHSHHHHHHHHH-----------HH-
T ss_pred CcCCEEEECCCHHHHHHHHHHHH--CCCeEEEEecCCCcC--------Ccc--ceeccHHHHHHHH-----------HH-
Confidence 35899999999999999999999 6899999997 4555 555 2322222111110 00
Q ss_pred hcCChHHHHHHHHhcCCcceeecCCeeeecCC-------ChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEE
Q 011610 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSD-------SSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLK 200 (481)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~-------~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~ 200 (481)
..+ ..+...+...|++.. ....++... -...+...+.+.+++.|++++.++.+.. + .+.+.|.
T Consensus 60 ~~~--~~~~~~~~~~gi~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~---~--~~~v~V~ 129 (478)
T 1v59_A 60 HLF--HQMHTEAQKRGIDVN---GDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE---D--ETKIRVT 129 (478)
T ss_dssp HHH--HHHHHTSGGGTEEEC---SCEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES---S--SSEEEEE
T ss_pred HHH--HHHHHHHHhcCcccC---CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc---c--CCeEEEE
Confidence 000 011111222333221 001110000 0012233455667788999999987652 3 3566676
Q ss_pred EeecccCceEE------EEcCeEEEccCCCh
Q 011610 201 VEKRTMNLVEC------IEADYLLIASGSSQ 225 (481)
Q Consensus 201 ~~~~~~~~~~~------i~ad~VIlAtG~~g 225 (481)
+.+ +...+ +.+|+||+|||+.+
T Consensus 130 ~~~---G~~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 130 PVD---GLEGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp CCT---TCTTCCSSCEEEEEEEEEECCCEEE
T ss_pred ecC---CCcccccccceEEeCEEEECcCCCC
Confidence 543 11135 99999999999754
No 138
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.74 E-value=2.8e-08 Score=103.88 Aligned_cols=34 Identities=26% Similarity=0.345 Sum_probs=31.6
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (481)
+.+|||+|||||++|++||+.|++ .|.+|+|||+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~--~G~~V~liEk 37 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQ--LGKKVAVADY 37 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh--CCCeEEEEEe
Confidence 357999999999999999999999 7899999996
No 139
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.74 E-value=2e-08 Score=105.27 Aligned_cols=38 Identities=32% Similarity=0.423 Sum_probs=33.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCC-CCcEEEEeCCCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAP-KLNVVIIEKGKPL 87 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~-g~~V~llE~~~~g 87 (481)
++||+|||||++|++||+.|++..+ |++|+|||+..+|
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~~G 40 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDGIG 40 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCCcC
Confidence 5899999999999999999999322 8999999987665
No 140
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.74 E-value=3e-08 Score=103.85 Aligned_cols=74 Identities=8% Similarity=0.041 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHH-HHHcCCCc
Q 011610 161 SSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRL-AAQLGHSI 238 (481)
Q Consensus 161 a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~l-a~~~G~~i 238 (481)
...+.+.+.+.+++. |+++++++|.+++.++ +.+.+++.+ .++...++.+|.||+|+|..+....+ ++.+|+++
T Consensus 214 d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~--~~v~v~~~~-~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~ 288 (492)
T 3ic9_A 214 DEEMKRYAEKTFNEE-FYFDAKARVISTIEKE--DAVEVIYFD-KSGQKTTESFQYVLAATGRKANVDKLGLENTSIEL 288 (492)
T ss_dssp CHHHHHHHHHHHHTT-SEEETTCEEEEEEECS--SSEEEEEEC-TTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCB
T ss_pred CHHHHHHHHHHHhhC-cEEEECCEEEEEEEcC--CEEEEEEEe-CCCceEEEECCEEEEeeCCccCCCCCChhhcCCEE
Confidence 356677777888877 9999999999998765 456666642 11222689999999999976532111 34455543
No 141
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.73 E-value=7.8e-08 Score=99.59 Aligned_cols=66 Identities=12% Similarity=0.089 Sum_probs=51.9
Q ss_pred CeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEe-cCCCCeEEEEEeecccCceEEEEcCeEEEccCCC
Q 011610 152 GRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASS-DNAGRKFLLKVEKRTMNLVECIEADYLLIASGSS 224 (481)
Q Consensus 152 g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~-~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~ 224 (481)
...||... ...+.++|.+.+++.|++|+++++|++|.. ++ +..++|++.+ ++++.||.||.|+|-.
T Consensus 247 ~~~yp~gG-~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~-g~v~gV~~~~-----G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 247 PFIYPLYG-LGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDD-NKVCGIKSSD-----GEIAYCDKVICDPSYV 313 (475)
T ss_dssp SEEEETTC-TTHHHHHHHHHHHHC--CEESSCCEEEEEECTT-SCEEEEEETT-----SCEEEEEEEEECGGGC
T ss_pred ceEEECCC-HHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecC-CeEEEEEECC-----CcEEECCEEEECCCcc
Confidence 35677654 467899999999999999999999999998 44 4557888875 6689999999998743
No 142
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.72 E-value=9.9e-08 Score=99.26 Aligned_cols=71 Identities=25% Similarity=0.370 Sum_probs=56.6
Q ss_pred hHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCcc
Q 011610 161 SSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSIV 239 (481)
Q Consensus 161 a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i~ 239 (481)
...+.+.+.+.+++.||+++++++|.+++.++ +.+.|.+.+ +.++.+|.||+|+|..+.. .+++.+|+++.
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~v~~~~-----g~~i~aD~Vv~a~G~~p~~-~l~~~~gl~~~ 271 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN--GKVARVITD-----KRTLDADLVILAAGVSPNT-QLARDAGLELD 271 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEES-----SCEEECSEEEECSCEEECC-HHHHHHTCCBC
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEccC--CeEEEEEeC-----CCEEEcCEEEECCCCCcCH-HHHHhCCccCC
Confidence 45677888889999999999999999998754 556677765 5689999999999976643 36677887653
No 143
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.72 E-value=6e-08 Score=105.22 Aligned_cols=76 Identities=9% Similarity=0.180 Sum_probs=53.9
Q ss_pred ChHHHHHHHHHHHHhCC---CEEEcCceEEEEEecC------CCCeEEEEEeec--------------------------
Q 011610 160 SSSSVIDCLLTEAKHRG---VVLQTGKVVTTASSDN------AGRKFLLKVEKR-------------------------- 204 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~G---v~i~~~~~V~~i~~~~------~~~~~~V~~~~~-------------------------- 204 (481)
....+.+.|.+.+.+.| ++|+++++|++++.++ ++..+.|++.+.
T Consensus 117 ~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 196 (665)
T 1pn0_A 117 HQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQ 196 (665)
T ss_dssp CHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHH
T ss_pred eHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEEEeccccccccccccccccccccccccccc
Confidence 45677788888888877 9999999999998753 013466665431
Q ss_pred -------------ccCceEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 205 -------------TMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 205 -------------~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
..+...+++||+||.|+|+.+. +.+.+|+..
T Consensus 197 ~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~---VR~~lg~~~ 240 (665)
T 1pn0_A 197 EEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSW---VRRTLGFEM 240 (665)
T ss_dssp HHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCH---HHHHHTCCC
T ss_pred ccccccccccccCCCCceEEEEeCEEEeccCCCCH---HHHhcCCCC
Confidence 1122367999999999998763 455567653
No 144
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.71 E-value=1.4e-07 Score=97.69 Aligned_cols=65 Identities=8% Similarity=0.052 Sum_probs=52.1
Q ss_pred eeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEec--CCCCeEEEEEeecccCceEEEEcCeEEEccCCCh
Q 011610 153 RVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSD--NAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 153 ~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~--~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g 225 (481)
..||.. ....+.++|.+.+++.|++|+++++|++|..+ + +..+.|+++ +.++.||.||+|+|.++
T Consensus 234 ~~~p~g-G~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~-~~~~~V~~~------g~~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 234 YLYPMY-GLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDT-GKFEGVKTK------LGTFKAPLVIADPTYFP 300 (453)
T ss_dssp EEEETT-CTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTT-TEEEEEEET------TEEEECSCEEECGGGCG
T ss_pred eEeeCC-CHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCC-CeEEEEEEC------CeEEECCEEEECCCccc
Confidence 446643 45688999999999999999999999999876 5 344566664 57899999999999764
No 145
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.71 E-value=3e-08 Score=103.24 Aligned_cols=139 Identities=20% Similarity=0.259 Sum_probs=79.4
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhH
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (481)
++++||+|||||++|++||..|++ .|++|+|||+. .+| |.| .+..+.+... +....
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~--~g~~V~liE~~~~~G--------G~~--~~~g~~Psk~-----------l~~~~ 60 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQ--LGFKTVCIEKNETLG--------GTC--LNVGCIPSKA-----------LLNNS 60 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSSSSS--------HHH--HHHSHHHHHH-----------HHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCcC--------Ccc--cccCccchHH-----------HHHHH
Confidence 356899999999999999999999 68999999976 565 555 3322222111 11000
Q ss_pred HhcCChHHHHH--HHHhcCCcceeecCCeeeecCC---C----hHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeE
Q 011610 127 FSLHGPMDTMS--WFSDHGVELKTEDDGRVFPVSD---S----SSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKF 197 (481)
Q Consensus 127 l~~~~~~~~~~--~~~~~Gi~~~~~~~g~~~p~~~---~----a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~ 197 (481)
. ...... .+...|++.. ...++... . ...+...+.+.+++.|++++.++.+ .+ +. +.+
T Consensus 61 -~---~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~--~~--~~~ 127 (474)
T 1zmd_A 61 -H---YYHMAHGTDFASRGIEMS----EVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGK-IT--GK--NQV 127 (474)
T ss_dssp -H---HHHHHHSSHHHHTTEEES----CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-EE--ET--TEE
T ss_pred -H---HHHHhhhhhHhhCccccC----CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ee--cC--CEE
Confidence 0 001111 2334454311 11111000 0 0112223456667889999988653 33 22 556
Q ss_pred EEEEeecccCceEEEEcCeEEEccCCCh
Q 011610 198 LLKVEKRTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 198 ~V~~~~~~~~~~~~i~ad~VIlAtG~~g 225 (481)
.|.+.+ ++..++.+|+||+|||+.+
T Consensus 128 ~v~~~~---gg~~~~~~d~lViAtGs~p 152 (474)
T 1zmd_A 128 TATKAD---GGTQVIDTKNILIATGSEV 152 (474)
T ss_dssp EEECTT---SCEEEEEEEEEEECCCEEE
T ss_pred EEEecC---CCcEEEEeCEEEECCCCCC
Confidence 665542 1125799999999999754
No 146
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.71 E-value=1e-07 Score=97.34 Aligned_cols=69 Identities=22% Similarity=0.174 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 162 SSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 162 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
..+.+.+.+.+++.||+++++++|.++..++ ....|++.+ +.++.||.||+|+|..+.. .+++.+|+++
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~~~v~~~d-----g~~i~aD~Vv~a~G~~p~~-~l~~~~gl~~ 253 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGEG--QLEQVMASD-----GRSFVADSALICVGAEPAD-QLARQAGLAC 253 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECSS--SCCEEEETT-----SCEEECSEEEECSCEEECC-HHHHHTTCCB
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEeccC--cEEEEEECC-----CCEEEcCEEEEeeCCeecH-HHHHhCCCcc
Confidence 4566778888889999999999999998653 555777776 6789999999999976642 4678888765
No 147
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.68 E-value=1.8e-09 Score=107.77 Aligned_cols=47 Identities=17% Similarity=0.178 Sum_probs=37.9
Q ss_pred ChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCCh
Q 011610 160 SSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g 225 (481)
+...++..|.+.+++.|++|+. ++|++++..+ .++||.||+|+|.+.
T Consensus 140 ~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~------------------~~~a~~VV~A~G~~s 186 (351)
T 3g3e_A 140 EGKNYLQWLTERLTERGVKFFQ-RKVESFEEVA------------------REGADVIVNCTGVWA 186 (351)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH------------------HTTCSEEEECCGGGG
T ss_pred cHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh------------------cCCCCEEEECCCcCh
Confidence 5678899999999999999988 8887764321 157999999999875
No 148
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.67 E-value=4.7e-08 Score=102.33 Aligned_cols=33 Identities=30% Similarity=0.470 Sum_probs=29.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEe
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIE 82 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE 82 (481)
.++||+|||||++|++||+.|++. .|++|+|||
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~-~G~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASL-HKKRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHH-HCCCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHH-cCCEEEEEe
Confidence 368999999999999999999982 278999999
No 149
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.67 E-value=8.5e-08 Score=99.61 Aligned_cols=54 Identities=19% Similarity=0.220 Sum_probs=41.1
Q ss_pred ChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCC
Q 011610 160 SSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS 223 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~ 223 (481)
....+.+.|.+.+.+ ++|+++++|++|+.++ +.+.|++.+ + ++.||+||+|++.
T Consensus 234 G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~~~v~~~~-----g-~~~ad~vV~a~p~ 287 (475)
T 3lov_A 234 GLESLIERLEEVLER--SEIRLETPLLAISRED--GRYRLKTDH-----G-PEYADYVLLTIPH 287 (475)
T ss_dssp CHHHHHHHHHHHCSS--CEEESSCCCCEEEEET--TEEEEECTT-----C-CEEESEEEECSCH
T ss_pred hHHHHHHHHHhhccC--CEEEcCCeeeEEEEeC--CEEEEEECC-----C-eEECCEEEECCCH
Confidence 344556666555433 7999999999998875 668887765 5 7999999999985
No 150
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.66 E-value=3e-08 Score=102.74 Aligned_cols=36 Identities=33% Similarity=0.386 Sum_probs=32.7
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPL 87 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g 87 (481)
++||+|||||++|++||..|++ .|++|+|+|+. .+|
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~--~g~~V~lie~~~~~G 37 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQ--LGMKVGVVEKEKALG 37 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSS
T ss_pred CCCEEEECCChhHHHHHHHHHH--CCCeEEEEeCCCCCC
Confidence 3799999999999999999999 68999999976 665
No 151
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.66 E-value=5.9e-08 Score=100.63 Aligned_cols=37 Identities=30% Similarity=0.457 Sum_probs=33.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPL 87 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g 87 (481)
.++||+|||||++|++||..|++ .|++|+|+|++.+|
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~--~g~~V~lie~~~~G 40 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQ--LGIPTVLVEGQALG 40 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH--HTCCEEEECSSCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHH--CCCEEEEEccCCCC
Confidence 46899999999999999999999 68999999997665
No 152
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.66 E-value=4.4e-08 Score=103.13 Aligned_cols=40 Identities=15% Similarity=0.405 Sum_probs=35.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCC-CcEEEEe-CCCCCCce
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPK-LNVVIIE-KGKPLSKV 90 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g-~~V~llE-~~~~g~k~ 90 (481)
..+||+|||||++||+||+.|++ .| .+|+|+| ++.+|+.+
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~--~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQ--NGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHH--TTCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHh--cCCCCEEEEeCCCCCCCce
Confidence 35799999999999999999999 78 9999999 56888644
No 153
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.65 E-value=3.8e-09 Score=106.86 Aligned_cols=138 Identities=15% Similarity=0.173 Sum_probs=79.6
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CC---CCceEEecCCceeeccCCCcchhHHh-hccCCCChhchhh
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KP---LSKVKISGGGRCNVTNGHCADKMILA-GHYPRGHKEFRGS 125 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~---g~k~~~sG~g~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~ 125 (481)
+||+|||||++|+++|+.|++.++|.+|+|+|+. .+ |..+.+++++.. . ..+. .+. .. . +
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~----~-~~~~-~~~~~~-----~-~--- 65 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQ----H-PANP-LSYLDA-----P-E--- 65 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTT----C-TTCG-GGGSSC-----G-G---
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHH----h-hcCc-chhhhh-----h-H---
Confidence 4899999999999999999993239999999964 33 444444443322 0 0000 000 00 0 0
Q ss_pred HHhcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecc
Q 011610 126 FFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRT 205 (481)
Q Consensus 126 ~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 205 (481)
...+...+...++. .|..+. ...+..|+ ......+.+.|.+.+++.|++++++++|++++.. .
T Consensus 66 -~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~-~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~----------~--- 128 (381)
T 3c4a_A 66 -RLNPQFLEDFKLVH-HNEPSL-MSTGVLLC-GVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL----------P--- 128 (381)
T ss_dssp -GGCCEEECCEEEEE-SSSEEE-CCCCSCEE-EEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC----------C---
T ss_pred -HHhhccccceEEEe-CCeeEE-ecCCCcee-eecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc----------c---
Confidence 00000000000000 121111 11122222 2346788899999999999999999999887421 1
Q ss_pred cCceEEEEcCeEEEccCCCh
Q 011610 206 MNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 206 ~~~~~~i~ad~VIlAtG~~g 225 (481)
.+.||.||.|+|..+
T Consensus 129 -----~~~ad~vV~AdG~~S 143 (381)
T 3c4a_A 129 -----LADYDLVVLANGVNH 143 (381)
T ss_dssp -----GGGCSEEEECCGGGG
T ss_pred -----cccCCEEEECCCCCc
Confidence 146899999999765
No 154
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.65 E-value=3.7e-08 Score=102.36 Aligned_cols=37 Identities=27% Similarity=0.403 Sum_probs=33.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPL 87 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g 87 (481)
.++||+|||||++|+++|+.|++ .|++|+|||++.+|
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~~~G 39 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVE--QGAQVTLIERGTIG 39 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCCCC
Confidence 46899999999999999999999 78999999987766
No 155
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.62 E-value=1.8e-08 Score=104.65 Aligned_cols=36 Identities=36% Similarity=0.467 Sum_probs=33.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPL 87 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g 87 (481)
++||+|||||++|++||..|++ .|.+|+|+|+...|
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~--~g~~V~lie~~~~G 41 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQ--LGLKVLAVEAGEVG 41 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTT
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCeEEEEeCCCCC
Confidence 5899999999999999999999 78999999987665
No 156
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.62 E-value=3e-07 Score=93.92 Aligned_cols=38 Identities=16% Similarity=0.358 Sum_probs=34.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCC-CcEEEEeC-CCCCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPK-LNVVIIEK-GKPLS 88 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g-~~V~llE~-~~~g~ 88 (481)
..+||+|||||++|++||+.|++ .| .+|+|+|+ +.+|+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~--~g~~~v~v~E~~~~~GG 44 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQ--AGFHDYTILERTDHVGG 44 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH--TTCCCEEEECSSSCSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHh--CCCCcEEEEECCCCCCC
Confidence 56899999999999999999999 78 89999995 57774
No 157
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.62 E-value=4e-07 Score=94.95 Aligned_cols=58 Identities=12% Similarity=0.088 Sum_probs=43.2
Q ss_pred CChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccC
Q 011610 159 DSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASG 222 (481)
Q Consensus 159 ~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG 222 (481)
+....+.+.|.+.+.+ .+|+++++|++|..++ +.+.|++.+. +...+++||+||+|+.
T Consensus 236 gG~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~v~v~~~~g--~~~~~~~ad~vI~a~p 293 (489)
T 2jae_A 236 GGMDRIYYAFQDRIGT--DNIVFGAEVTSMKNVS--EGVTVEYTAG--GSKKSITADYAICTIP 293 (489)
T ss_dssp TCTTHHHHHHHHHHCG--GGEETTCEEEEEEEET--TEEEEEEEET--TEEEEEEESEEEECSC
T ss_pred CCHHHHHHHHHHhcCC--CeEEECCEEEEEEEcC--CeEEEEEecC--CeEEEEECCEEEECCC
Confidence 4456677777776543 6899999999999875 6677877640 1126799999999996
No 158
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.62 E-value=7.5e-08 Score=100.87 Aligned_cols=32 Identities=28% Similarity=0.413 Sum_probs=29.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhc-cCCCCcEEEEe
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKT-VAPKLNVVIIE 82 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~-~~~g~~V~llE 82 (481)
.++||+|||||++|++||+.|++ . |++|+|||
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~--G~~V~liE 38 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLY--GKRVAVVD 38 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHH--CCCEEEEE
T ss_pred cccCEEEECCChhHHHHHHHHHHhc--CCeEEEEe
Confidence 46899999999999999999998 5 78999999
No 159
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.59 E-value=6.4e-07 Score=95.28 Aligned_cols=66 Identities=9% Similarity=0.024 Sum_probs=45.7
Q ss_pred HhCCCEEEcCceEEEEEec--CCCCeEEEEEeecccCceEEEEc-CeEEEccCCChh---------H-HHHHHHcCCCcc
Q 011610 173 KHRGVVLQTGKVVTTASSD--NAGRKFLLKVEKRTMNLVECIEA-DYLLIASGSSQQ---------G-HRLAAQLGHSIV 239 (481)
Q Consensus 173 ~~~Gv~i~~~~~V~~i~~~--~~~~~~~V~~~~~~~~~~~~i~a-d~VIlAtG~~g~---------g-~~la~~~G~~i~ 239 (481)
.+.+++|++++.|++|..+ + +...+|++.+ ..+...++.| +-||+|+|+-.+ | ...++++|+++.
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~-~~a~GV~~~~-~~g~~~~v~A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv 294 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEAD-RTCKGVTVVT-AAGNELNFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTI 294 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTT-TEEEEEEEEE-TTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCS
T ss_pred cCCCeEEEcCcEEEEEEEeCCC-CEEEEEEEEe-CCCcEEEEEeeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCee
Confidence 3568999999999999987 3 3456777764 1233457888 459999996322 1 345678888765
Q ss_pred c
Q 011610 240 D 240 (481)
Q Consensus 240 ~ 240 (481)
.
T Consensus 295 ~ 295 (577)
T 3q9t_A 295 V 295 (577)
T ss_dssp E
T ss_pred c
Confidence 3
No 160
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.58 E-value=6.1e-07 Score=95.34 Aligned_cols=71 Identities=23% Similarity=0.327 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHHHhCCCEEEcCceEEEEEec------------------CCCCeEEEEEeecccCceEEEEcCeEEEccC
Q 011610 161 SSSVIDCLLTEAKHRGVVLQTGKVVTTASSD------------------NAGRKFLLKVEKRTMNLVECIEADYLLIASG 222 (481)
Q Consensus 161 a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~------------------~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG 222 (481)
...+.+.+.+.+++.||+++++++|.++..+ + ++.+.+.+.+ +.++.+|.||+|+|
T Consensus 191 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~-----g~~i~~D~vi~a~G 264 (565)
T 3ntd_A 191 DREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHI-KGHLSLTLSN-----GELLETDLLIMAIG 264 (565)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCT-TCEEEEEETT-----SCEEEESEEEECSC
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccC-CCcEEEEEcC-----CCEEEcCEEEECcC
Confidence 4567778888899999999999999999862 2 2556666654 56899999999999
Q ss_pred CChhHHHHHHHcCCCc
Q 011610 223 SSQQGHRLAAQLGHSI 238 (481)
Q Consensus 223 ~~g~g~~la~~~G~~i 238 (481)
..+.. .+++.+|+.+
T Consensus 265 ~~p~~-~l~~~~g~~~ 279 (565)
T 3ntd_A 265 VRPET-QLARDAGLAI 279 (565)
T ss_dssp EEECC-HHHHHHTCCB
T ss_pred Cccch-HHHHhCCccc
Confidence 76653 3567777665
No 161
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.58 E-value=2.6e-07 Score=96.64 Aligned_cols=114 Identities=18% Similarity=0.168 Sum_probs=70.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhccC-CCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhH
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVA-PKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~-~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (481)
+++||+|||||++|+++|..|++.+ ++.+|+|||+.. ++ ...|.+. .+... . .
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~-------~~~~~~~--------~~~~~----~--~---- 88 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNIS-------FLGAGMA--------LWIGE----Q--I---- 88 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCS-------BCGGGHH--------HHHTT----S--S----
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCC-------ccccccc--------hhhcC----c--c----
Confidence 3589999999999999999999832 239999999764 32 1111000 00000 0 0
Q ss_pred HhcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeeccc
Q 011610 127 FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTM 206 (481)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~ 206 (481)
..+.+ ..++ +.+.+++.|++++.+++|..+..++ +.+.+.. +
T Consensus 89 ---~~~~~------------------~~~~-----------~~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~-~--- 130 (490)
T 2bc0_A 89 ---AGPEG------------------LFYS-----------DKEELESLGAKVYMESPVQSIDYDA--KTVTALV-D--- 130 (490)
T ss_dssp ---SCSGG------------------GBSC-----------CHHHHHHTTCEEETTCCEEEEETTT--TEEEEEE-T---
T ss_pred ---CCHHH------------------hhhc-----------CHHHHHhCCCEEEeCCEEEEEECCC--CEEEEEe-C---
Confidence 00000 0000 1223456799999999999998654 5555542 1
Q ss_pred CceEEEEcCeEEEccCCCh
Q 011610 207 NLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 207 ~~~~~i~ad~VIlAtG~~g 225 (481)
+.+.++.+|+||+|||+.+
T Consensus 131 g~~~~~~~d~lviAtG~~p 149 (490)
T 2bc0_A 131 GKNHVETYDKLIFATGSQP 149 (490)
T ss_dssp TEEEEEECSEEEECCCEEE
T ss_pred CcEEEEECCEEEECCCCCc
Confidence 1145799999999999754
No 162
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.56 E-value=5.1e-07 Score=93.03 Aligned_cols=38 Identities=24% Similarity=0.428 Sum_probs=33.7
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC-CCCCCc
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLSK 89 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~k 89 (481)
++||+|||||++|++||+.|++ .|.+|+|+|+ +.+|+.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~--~g~~v~v~E~~~~~GG~ 43 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRK--AGLSVAVIEARDRVGGR 43 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHH--CCCcEEEEECCCCCCCc
Confidence 5799999999999999999999 7899999995 467743
No 163
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.56 E-value=4.5e-08 Score=91.81 Aligned_cols=37 Identities=19% Similarity=0.253 Sum_probs=33.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPL 87 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g 87 (481)
|.+||+||||||+||+||+.|++ .|++|+||||. .+|
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~--~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTA--AGHQVHLFDKSRGSG 38 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCCCCC
Confidence 46899999999999999999999 79999999965 565
No 164
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.55 E-value=1.3e-07 Score=97.76 Aligned_cols=36 Identities=36% Similarity=0.633 Sum_probs=32.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (481)
++||+|||||++|+++|+.|++.+++.+|+|+|+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 479999999999999999999865589999999754
No 165
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.54 E-value=3.3e-07 Score=99.95 Aligned_cols=57 Identities=11% Similarity=0.165 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChh
Q 011610 164 VIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQ 226 (481)
Q Consensus 164 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~ 226 (481)
....+.+.+++.||+|+++++|+++..+ ...+... ..+.+.++.+|.||+|+|..+.
T Consensus 569 ~~~~l~~~l~~~GV~i~~~~~V~~i~~~----~~~v~~~--~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 569 EVNRIQRRLIENGVARVTDHAVVAVGAG----GVTVRDT--YASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp CHHHHHHHHHHTTCEEEESEEEEEEETT----EEEEEET--TTCCEEEEECSEEEEESCEEEC
T ss_pred hHHHHHHHHHHCCCEEEcCcEEEEEECC----eEEEEEc--cCCeEEEEECCEEEECCCCCCC
Confidence 3566778888999999999999999742 2334322 1223578999999999996543
No 166
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.52 E-value=2.2e-07 Score=95.58 Aligned_cols=110 Identities=18% Similarity=0.256 Sum_probs=69.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCC--cEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhH
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~--~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (481)
+.+||+|||||++|+++|..|++ .|. +|+|+|+..... ..++.+. ..+.....
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~--~g~~~~V~lie~~~~~~------~~~~~l~-----------~~~~~~~~------ 57 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRA--SGWEGNIRLVGDATVIP------HHLPPLS-----------KAYLAGKA------ 57 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSCCSCC------BCSGGGG-----------TTTTTTCS------
T ss_pred CCCcEEEEcCHHHHHHHHHHHHc--cCcCCCEEEEECCCCCC------CcCCCCc-----------HHHhCCCC------
Confidence 45899999999999999999999 566 799999653210 0111100 00100000
Q ss_pred HhcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeeccc
Q 011610 127 FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTM 206 (481)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~ 206 (481)
...+ ..+ .+.+.+++.|++++.+++|+.+..++ . .|.+.+
T Consensus 58 ----~~~~------------------~~~-----------~~~~~~~~~gv~~~~~~~v~~i~~~~--~--~v~~~~--- 97 (431)
T 1q1r_A 58 ----TAES------------------LYL-----------RTPDAYAAQNIQLLGGTQVTAINRDR--Q--QVILSD--- 97 (431)
T ss_dssp ----CSGG------------------GBS-----------SCHHHHHHTTEEEECSCCEEEEETTT--T--EEEETT---
T ss_pred ----ChHH------------------hcc-----------cCHHHHHhCCCEEEeCCEEEEEECCC--C--EEEECC---
Confidence 0000 000 01123456799999999999998653 3 456654
Q ss_pred CceEEEEcCeEEEccCCCh
Q 011610 207 NLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 207 ~~~~~i~ad~VIlAtG~~g 225 (481)
+.++.+|+||+|||+.+
T Consensus 98 --g~~~~~d~lviAtG~~p 114 (431)
T 1q1r_A 98 --GRALDYDRLVLATGGRP 114 (431)
T ss_dssp --SCEEECSEEEECCCEEE
T ss_pred --CCEEECCEEEEcCCCCc
Confidence 56799999999999754
No 167
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.52 E-value=3.2e-07 Score=98.08 Aligned_cols=119 Identities=19% Similarity=0.307 Sum_probs=73.3
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHH
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (481)
.+++||+|||||++|++||+.|++.+++.+|+|||+..... -..|.+ + ..+
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~------~~~~~l------p-----------------~~~ 84 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS------FANCGL------P-----------------YYI 84 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS------BCGGGH------H-----------------HHH
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc------ccCCCC------c-----------------hhh
Confidence 34689999999999999999999955589999999764320 000100 0 000
Q ss_pred hcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccC
Q 011610 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMN 207 (481)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~ 207 (481)
. |. ..+ ....+...+...+++.|++++++++|+++..++ +.+.+... ..+
T Consensus 85 ~--------------g~---------~~~---~~~~~~~~~~~~~~~~gi~v~~~~~V~~id~~~--~~v~v~~~--~~g 134 (588)
T 3ics_A 85 G--------------GV---------ITE---RQKLLVQTVERMSKRFNLDIRVLSEVVKINKEE--KTITIKNV--TTN 134 (588)
T ss_dssp T--------------TS---------SCC---GGGGBSSCHHHHHHHTTCEEECSEEEEEEETTT--TEEEEEET--TTC
T ss_pred c--------------Cc---------CCC---hHHhhccCHHHHHHhcCcEEEECCEEEEEECCC--CEEEEeec--CCC
Confidence 0 00 000 000011122334456799999999999998764 55555431 112
Q ss_pred ceEEEEcCeEEEccCCCh
Q 011610 208 LVECIEADYLLIASGSSQ 225 (481)
Q Consensus 208 ~~~~i~ad~VIlAtG~~g 225 (481)
....+.+|+||+|||+.+
T Consensus 135 ~~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 135 ETYNEAYDVLILSPGAKP 152 (588)
T ss_dssp CEEEEECSEEEECCCEEE
T ss_pred CEEEEeCCEEEECCCCCC
Confidence 234789999999999743
No 168
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.51 E-value=9.2e-07 Score=90.93 Aligned_cols=65 Identities=15% Similarity=0.134 Sum_probs=51.3
Q ss_pred eeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCCh
Q 011610 153 RVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 153 ~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g 225 (481)
..||... ...+.++|.+.+++.|++|+++++|++|..++ ++...|+++ +.++.||+||+|+|.+.
T Consensus 226 ~~~p~gG-~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~-~~v~~v~~~------g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 226 YLYPLYG-LGELPQGFARLSAIYGGTYMLNKPVDDIIMEN-GKVVGVKSE------GEVARCKQLICDPSYVP 290 (433)
T ss_dssp EEEETTC-TTHHHHHHHHHHHHHTCCCBCSCCCCEEEEET-TEEEEEEET------TEEEECSEEEECGGGCG
T ss_pred EEEeCcC-HHHHHHHHHHHHHHcCCEEECCCEEEEEEEeC-CEEEEEEEC------CeEEECCEEEECCCCCc
Confidence 4576544 67889999999999999999999999998765 333345543 57899999999999764
No 169
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.50 E-value=4.7e-07 Score=94.37 Aligned_cols=37 Identities=35% Similarity=0.495 Sum_probs=31.9
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKP 86 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~ 86 (481)
++||+|||||++|++||+.|++.++|.+|+|||+...
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 72 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEI 72 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 4799999999999999999998545899999997643
No 170
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.49 E-value=4.8e-07 Score=95.89 Aligned_cols=36 Identities=25% Similarity=0.479 Sum_probs=32.2
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (481)
...||+||||+|++|+.+|..|++ .|.+|+|||++.
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~--~g~~VlvlE~g~ 40 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSE--AGKKVLLLERGG 40 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSC
T ss_pred CCceeEEEECcCHHHHHHHHHHHh--CCCeEEEEeCCC
Confidence 357999999999999999999999 799999999653
No 171
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.48 E-value=2.9e-07 Score=95.15 Aligned_cols=116 Identities=19% Similarity=0.236 Sum_probs=70.7
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
+||+|||||++|+++|..|++..+|.+|+|+|+.. ++ ...|.+. . +.... + ..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~-------~~~~~~~--------~----~~~g~--~-----~~ 54 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNIS-------FLSCGIA--------L----YLGKE--I-----KN 54 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCC-------BCGGGHH--------H----HHTTC--B-----GG
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC-------cccccch--------h----hhcCC--c-----cc
Confidence 59999999999999999999844489999999764 32 1111100 0 00000 0 00
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
+++.+ ..+ .+.+.+++.|++++.+++|..+..++ +.+.+... ..+.+
T Consensus 55 ~~~~~------------------~~~-----------~~~~~~~~~gv~~~~~~~v~~i~~~~--~~v~v~~~--~~g~~ 101 (452)
T 2cdu_A 55 NDPRG------------------LFY-----------SSPEELSNLGANVQMRHQVTNVDPET--KTIKVKDL--ITNEE 101 (452)
T ss_dssp GCGGG------------------GBS-----------CCHHHHHHTTCEEEESEEEEEEEGGG--TEEEEEET--TTCCE
T ss_pred CCHHH------------------hhh-----------cCHHHHHHcCCEEEeCCEEEEEEcCC--CEEEEEec--CCCce
Confidence 00000 000 01223456799999999999998654 55555431 11224
Q ss_pred EEEEcCeEEEccCCCh
Q 011610 210 ECIEADYLLIASGSSQ 225 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g 225 (481)
.++.+|++|+|||+.+
T Consensus 102 ~~~~~d~lviAtGs~p 117 (452)
T 2cdu_A 102 KTEAYDKLIMTTGSKP 117 (452)
T ss_dssp EEEECSEEEECCCEEE
T ss_pred EEEECCEEEEccCCCc
Confidence 6799999999999754
No 172
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.47 E-value=7.2e-07 Score=93.21 Aligned_cols=60 Identities=13% Similarity=0.240 Sum_probs=42.3
Q ss_pred CCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCC
Q 011610 158 SDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS 223 (481)
Q Consensus 158 ~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~ 223 (481)
.+....+.+.|.+.+.. +|+++++|++|..++ +.+.|++.+. .....+++||+||+|++.
T Consensus 237 ~gG~~~l~~~l~~~l~~---~i~~~~~V~~I~~~~--~~v~v~~~~~-~~~~~~~~ad~vI~t~p~ 296 (498)
T 2iid_A 237 VDGMDKLPTAMYRDIQD---KVHFNAQVIKIQQND--QKVTVVYETL-SKETPSVTADYVIVCTTS 296 (498)
T ss_dssp TTCTTHHHHHHHHHTGG---GEESSCEEEEEEECS--SCEEEEEECS-SSCCCEEEESEEEECSCH
T ss_pred CCcHHHHHHHHHHhccc---ccccCCEEEEEEECC--CeEEEEEecC-CcccceEEeCEEEECCCh
Confidence 34456777777766543 799999999999875 5677777641 000125899999999973
No 173
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.46 E-value=6.1e-07 Score=96.51 Aligned_cols=60 Identities=13% Similarity=0.092 Sum_probs=41.7
Q ss_pred CCCEEEcCceEEEEEecCCC-CeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcC
Q 011610 175 RGVVLQTGKVVTTASSDNAG-RKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLG 235 (481)
Q Consensus 175 ~Gv~i~~~~~V~~i~~~~~~-~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G 235 (481)
.|++|++++.|++|..++++ ...+|++.+..++...++.||.||+|+|+.+.. .++...|
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~-~lL~~sg 333 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNT-QLLVNSG 333 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHH-HHHHTTT
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCH-HHHHhcC
Confidence 38999999999999876411 345677764223445689999999999987653 3444333
No 174
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.45 E-value=2.4e-06 Score=89.81 Aligned_cols=35 Identities=40% Similarity=0.589 Sum_probs=31.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+||+||||+|++|+.+|.+|++. ++.+|+|||++
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~-~~~~VLvLEaG 50 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSED-PDSRVLLIEAG 50 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTS-TTSCEEEECSS
T ss_pred CCeeEEEECccHHHHHHHHHHHhC-CCCeEEEEcCC
Confidence 479999999999999999999974 68999999965
No 175
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.45 E-value=2.2e-07 Score=95.90 Aligned_cols=35 Identities=20% Similarity=0.318 Sum_probs=31.2
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (481)
+||+|||||++|++||..|++..+|.+|+|||+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCC
Confidence 58999999999999999999854489999999764
No 176
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.43 E-value=8.8e-07 Score=91.97 Aligned_cols=57 Identities=21% Similarity=0.222 Sum_probs=44.7
Q ss_pred ChHHHHHHHHHHHHhC--------CCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCC
Q 011610 160 SSSSVIDCLLTEAKHR--------GVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS 223 (481)
Q Consensus 160 ~a~~~~~~l~~~~~~~--------Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~ 223 (481)
....+.+.|.+.+.+. |++|+++++|++|..++ +.+.|++.+ +.+++||+||+|++.
T Consensus 204 G~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~--~~v~v~~~~-----g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 204 GYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSP--GGVTVKTED-----NSVYSADYVMVSASL 268 (472)
T ss_dssp CTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECS--SCEEEEETT-----SCEEEESEEEECSCH
T ss_pred cHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcC--CcEEEEECC-----CCEEEcCEEEEecCH
Confidence 4456777777666543 78999999999999875 557788775 568999999999983
No 177
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.42 E-value=4.7e-07 Score=91.02 Aligned_cols=34 Identities=26% Similarity=0.352 Sum_probs=30.0
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKP 86 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~ 86 (481)
-.||+|||||++|++||..|++ .| +|+|+|+...
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~--~g-~V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ--TY-EVTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT--TS-EEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhh--cC-CEEEEECCCC
Confidence 4699999999999999999998 67 9999997653
No 178
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.41 E-value=3.7e-06 Score=85.68 Aligned_cols=66 Identities=20% Similarity=0.266 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 161 SSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 161 a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
...+.+.+.+.+++.||+++++++|.++. + + .|++.+ +.++.+|.||+|+|..+.. .+++.+|+.+
T Consensus 186 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~--~--~v~~~~-----g~~i~~D~vi~a~G~~p~~-~l~~~~gl~~ 251 (408)
T 2gqw_A 186 PATLADFVARYHAAQGVDLRFERSVTGSV--D--G--VVLLDD-----GTRIAADMVVVGIGVLAND-ALARAAGLAC 251 (408)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESCCEEEEE--T--T--EEEETT-----SCEEECSEEEECSCEEECC-HHHHHHTCCB
T ss_pred CHHHHHHHHHHHHHcCcEEEeCCEEEEEE--C--C--EEEECC-----CCEEEcCEEEECcCCCccH-HHHHhCCCCC
Confidence 35677788888999999999999999997 4 3 566655 5689999999999976542 3677777765
No 179
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.40 E-value=7e-07 Score=88.09 Aligned_cols=39 Identities=31% Similarity=0.485 Sum_probs=33.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPL 87 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g 87 (481)
.++||+||||||+|++||++|++...|++|+|||+. .+|
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 357999999999999999999863369999999965 666
No 180
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.36 E-value=9.6e-07 Score=94.61 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=31.9
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...+||+|||||++|++||..|++ .|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~--~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAK--YGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHH--TTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHh--CCCeEEEEecc
Confidence 356899999999999999999999 78999999963
No 181
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.35 E-value=7.8e-07 Score=91.62 Aligned_cols=115 Identities=17% Similarity=0.219 Sum_probs=69.2
Q ss_pred eEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhcCC
Q 011610 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHG 131 (481)
Q Consensus 52 DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 131 (481)
+|+|||||++|++||..|++.++..+|+|||++.... ..+|.+.. +.......
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~------~~~~~l~~--------~~~~~~~~------------- 54 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMS------FANCALPY--------VIGEVVED------------- 54 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSS------BCGGGHHH--------HHTTSSCC-------------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCC------CCcchhHH--------HHcCCccc-------------
Confidence 6999999999999999999865567899999753210 12221100 00000000
Q ss_pred hHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEE
Q 011610 132 PMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVEC 211 (481)
Q Consensus 132 ~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~ 211 (481)
...... .... +..++.+++++.+++|+.+..+. ..+.+... ..+.+.+
T Consensus 55 -----------------~~~~~~----~~~~-------~~~~~~~i~~~~~~~V~~id~~~--~~~~~~~~--~~~~~~~ 102 (437)
T 4eqs_A 55 -----------------RRYALA----YTPE-------KFYDRKQITVKTYHEVIAINDER--QTVSVLNR--KTNEQFE 102 (437)
T ss_dssp -----------------GGGTBC----CCHH-------HHHHHHCCEEEETEEEEEEETTT--TEEEEEET--TTTEEEE
T ss_pred -----------------hhhhhh----cCHH-------HHHHhcCCEEEeCCeEEEEEccC--cEEEEEec--cCCceEE
Confidence 000000 0111 12345689999999999997654 44444332 2333568
Q ss_pred EEcCeEEEccCCCh
Q 011610 212 IEADYLLIASGSSQ 225 (481)
Q Consensus 212 i~ad~VIlAtG~~g 225 (481)
+.+|++|+|||+.+
T Consensus 103 ~~yd~lVIATGs~p 116 (437)
T 4eqs_A 103 ESYDKLILSPGASA 116 (437)
T ss_dssp EECSEEEECCCEEE
T ss_pred EEcCEEEECCCCcc
Confidence 99999999999754
No 182
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.35 E-value=3.1e-07 Score=93.59 Aligned_cols=35 Identities=29% Similarity=0.436 Sum_probs=30.6
Q ss_pred CeEEEECCchHHHHHHHHHhc-cCCCCcEEEEeCCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKT-VAPKLNVVIIEKGK 85 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~-~~~g~~V~llE~~~ 85 (481)
.||+|||||++|+++|..|++ ..+|.+|+|||+..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 589999999999999999998 33479999999764
No 183
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.35 E-value=1.5e-06 Score=90.88 Aligned_cols=69 Identities=20% Similarity=0.310 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 162 SSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 162 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
..+...+.+.+++.||+++++++|+++..++ +.+.|++.+ +.++.||.||+|+|..+.. .+++.+|+.+
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~--~~~~v~l~d-----G~~i~aD~Vv~a~G~~pn~-~l~~~~gl~~ 294 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVSS--GKLLIKLKD-----GRKVETDHIVAAVGLEPNV-ELAKTGGLEI 294 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEET--TEEEEEETT-----SCEEEESEEEECCCEEECC-TTHHHHTCCB
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEecC--CeEEEEECC-----CCEEECCEEEECCCCCccH-HHHHHcCCcc
Confidence 5667788888999999999999999998654 556777765 5689999999999976542 2566677664
No 184
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.34 E-value=7.1e-07 Score=91.83 Aligned_cols=53 Identities=17% Similarity=-0.070 Sum_probs=40.5
Q ss_pred cccccCCCCeEEEEEEeecccCcc-------hHHHHHHHHHHHHHHHHHhHHhhHhhhhc
Q 011610 426 TMESKIHPRLFFAGEVLNVDGVTG-------GFNFQNAWSGGYIAGTSIGKLSNDATLKN 478 (481)
Q Consensus 426 t~esk~~~gLy~~GE~ldv~g~~G-------Gynl~~A~~sG~~AG~~aa~~~~~~~~~~ 478 (481)
+|+++.+||+|++|++..+.+..| --.-+.|...|..|+.++++....+.++.
T Consensus 291 ~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~~~~ 350 (437)
T 3sx6_A 291 HQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQ 350 (437)
T ss_dssp TSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSCCCC
T ss_pred hccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 788889999999997665543211 12468899999999999998887766654
No 185
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.31 E-value=3e-06 Score=89.95 Aligned_cols=34 Identities=38% Similarity=0.537 Sum_probs=31.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+||+||||||++|+.+|.+|++. ++.+|+|||++
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~-~~~~VlllEaG 35 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTED-PDVSVLVLEAG 35 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTS-TTCCEEEECSS
T ss_pred CcCEEEECCcHHHHHHHHHHHhC-cCCcEEEEecC
Confidence 58999999999999999999984 68999999965
No 186
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.31 E-value=6.9e-07 Score=93.49 Aligned_cols=111 Identities=20% Similarity=0.226 Sum_probs=70.4
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
.+||+|||||++|+++|+.|++ . ++|+|||+. .+| |.+. +... . .
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~--~-~~V~vie~~~~~G--------G~~~--~~~~--------~-------~------ 153 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQ--Y-LTVALIEERGWLG--------GDMW--LKGI--------K-------Q------ 153 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTT--T-CCEEEECTTSSSS--------CSGG--GTCS--------E-------E------
T ss_pred cCCEEEECccHHHHHHHHHHHh--c-CCEEEEeCCCCCC--------Ceee--cccc--------c-------c------
Confidence 4699999999999999999999 6 999999976 444 2221 1000 0 0
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
+ |++ . ...++...+.+.+ +.|++++++++|.++..++ +.+.+...+ .+.
T Consensus 154 -~------------g~~-----------~--~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~--~~~~~~~~~--~~~ 202 (493)
T 1y56_A 154 -E------------GFN-----------K--DSRKVVEELVGKL-NENTKIYLETSALGVFDKG--EYFLVPVVR--GDK 202 (493)
T ss_dssp -T------------TTT-----------E--EHHHHHHHHHHTC-CTTEEEETTEEECCCEECS--SSEEEEEEE--TTE
T ss_pred -C------------CCC-----------C--CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCC--cEEEEEEec--CCe
Confidence 0 000 0 1122233333333 5689999999999988764 445444321 111
Q ss_pred eEEEEcCeEEEccCCCh
Q 011610 209 VECIEADYLLIASGSSQ 225 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g 225 (481)
...+.+|++|+|||+.+
T Consensus 203 ~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 203 LIEILAKRVVLATGAID 219 (493)
T ss_dssp EEEEEESCEEECCCEEE
T ss_pred EEEEECCEEEECCCCCc
Confidence 23799999999999754
No 187
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.28 E-value=2.5e-06 Score=96.31 Aligned_cols=36 Identities=25% Similarity=0.386 Sum_probs=32.4
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPL 87 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g 87 (481)
.+||+|||||++|++||+.|++ .|++|+|||+. .+|
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~--~G~~V~lie~~~~~G 164 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASR--SGARVMLLDERAEAG 164 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh--CCCcEEEEeCCCCCC
Confidence 5799999999999999999999 78999999975 554
No 188
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.25 E-value=6.2e-07 Score=92.11 Aligned_cols=53 Identities=9% Similarity=-0.051 Sum_probs=39.8
Q ss_pred ccccccCCCCeEEEEEEeecccCcch-------HHHHHHHHHHHHHHHHHhHHhhHhhhh
Q 011610 425 NTMESKIHPRLFFAGEVLNVDGVTGG-------FNFQNAWSGGYIAGTSIGKLSNDATLK 477 (481)
Q Consensus 425 ~t~esk~~~gLy~~GE~ldv~g~~GG-------ynl~~A~~sG~~AG~~aa~~~~~~~~~ 477 (481)
.+|+++.+||+|++|+|.++....+. -.-|.|...|.++++++++....+.++
T Consensus 279 ~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~~~ 338 (430)
T 3hyw_A 279 RCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDK 338 (430)
T ss_dssp TTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred ccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 68999999999999987766432211 123789999999999998777665544
No 189
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.23 E-value=7.8e-06 Score=86.52 Aligned_cols=59 Identities=12% Similarity=0.127 Sum_probs=40.2
Q ss_pred HHHHHHH-HhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcC-eEEEccCCC
Q 011610 166 DCLLTEA-KHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEAD-YLLIASGSS 224 (481)
Q Consensus 166 ~~l~~~~-~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad-~VIlAtG~~ 224 (481)
.+++..+ .+.|++|++++.|++|..++++...+|.+.+..++....+.|+ .||+|+|+.
T Consensus 212 ~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 212 VSYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp HHHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 3344434 3579999999999999986312355777653111334579998 899999974
No 190
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.22 E-value=5.1e-07 Score=95.48 Aligned_cols=34 Identities=32% Similarity=0.518 Sum_probs=31.0
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+||+||||+|++|+.+|.+|++ +.+|+|||++
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse---g~~VlvLEaG 57 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE---KYKVLVLERG 57 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT---TSCEEEECSS
T ss_pred cCcccEEEECccHHHHHHHHHHhc---CCcEEEEecC
Confidence 356999999999999999999998 6899999976
No 191
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.22 E-value=2.9e-07 Score=94.55 Aligned_cols=57 Identities=11% Similarity=-0.030 Sum_probs=42.0
Q ss_pred CCCCCCCcccccccCCCCeEEEEEEeecccCcc-------hHHHHHHHHHHHHHHHHHhHHhhHhhhh
Q 011610 417 VPLSEISLNTMESKIHPRLFFAGEVLNVDGVTG-------GFNFQNAWSGGYIAGTSIGKLSNDATLK 477 (481)
Q Consensus 417 v~~~ei~~~t~esk~~~gLy~~GE~ldv~g~~G-------Gynl~~A~~sG~~AG~~aa~~~~~~~~~ 477 (481)
|.++ .+|+++.+||+|++|++..+.+..| --..+.|...|.+|+.++.+....+.++
T Consensus 275 i~Vd----~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~~~ 338 (430)
T 3h28_A 275 VIVN----RCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDK 338 (430)
T ss_dssp BCCC----TTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred EecC----ccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 6554 3688889999999996655443211 1246889999999999999888776654
No 192
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.14 E-value=1.3e-05 Score=84.01 Aligned_cols=34 Identities=24% Similarity=0.370 Sum_probs=31.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+|++|||+|++|+.+|+.|++ .|.+|+|||++
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~--~~~~v~~~e~~ 37 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGE--AGVQTLMLEMG 37 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHh--CCCcEEEEeCC
Confidence 46899999999999999999999 79999999954
No 193
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.13 E-value=1.8e-05 Score=83.04 Aligned_cols=36 Identities=25% Similarity=0.432 Sum_probs=32.5
Q ss_pred CCCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 47 TSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 47 ~~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...++|++|||+|++|+.+|..|++ ++.+|+|||++
T Consensus 8 ~~~~~d~~iiG~G~~g~~~a~~l~~--~~~~v~~~e~~ 43 (507)
T 1coy_A 8 DGDRVPALVIGSGYGGAVAALRLTQ--AGIPTQIVEMG 43 (507)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHH--CCCcEEEEECC
Confidence 3457999999999999999999999 79999999954
No 194
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.11 E-value=1.2e-06 Score=90.69 Aligned_cols=37 Identities=19% Similarity=0.207 Sum_probs=32.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPL 87 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g 87 (481)
..+||+|||||++|+++|+.|++ .|++|+|+|+. .+|
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~--~G~~V~v~e~~~~~G 158 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRA--KGYEVHVYDRYDRMG 158 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH--HTCCEEEECSSSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCeEEEEeccCCCC
Confidence 56899999999999999999999 68999999975 444
No 195
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.11 E-value=1.8e-05 Score=81.91 Aligned_cols=114 Identities=20% Similarity=0.240 Sum_probs=78.0
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
.+|+|||||+.|+-+|..|++ .|.+|+|+|+.. +.. . .+
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~--------------~--~~---------------------- 209 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRR--LGAEVTLIEYMPEILP--------------Q--GD---------------------- 209 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSST--------------T--SC----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHH--CCCeEEEEEcCCcccc--------------c--cC----------------------
Confidence 589999999999999999998 689999999642 220 0 00
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
..+.+.+.+.+++.||+++++++|+++..++ +.+.|++.+...+..
T Consensus 210 --------------------------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~--~~~~v~~~~~~~g~~ 255 (464)
T 2eq6_A 210 --------------------------------PETAALLRRALEKEGIRVRTKTKAVGYEKKK--DGLHVRLEPAEGGEG 255 (464)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTCCSC
T ss_pred --------------------------------HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC--CEEEEEEeecCCCce
Confidence 1122344556677899999999999998764 556666542000222
Q ss_pred EEEEcCeEEEccCCChhHHHH-HHHcCCCc
Q 011610 210 ECIEADYLLIASGSSQQGHRL-AAQLGHSI 238 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g~g~~l-a~~~G~~i 238 (481)
.++.+|.||+|+|..+....+ ++.+|+.+
T Consensus 256 ~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~ 285 (464)
T 2eq6_A 256 EEVVVDKVLVAVGRKPRTEGLGLEKAGVKV 285 (464)
T ss_dssp EEEEESEEEECSCEEESCTTSSHHHHTCCB
T ss_pred eEEEcCEEEECCCcccCCCCCChhhcCcee
Confidence 479999999999965532221 45556554
No 196
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.07 E-value=2.1e-05 Score=80.91 Aligned_cols=98 Identities=23% Similarity=0.343 Sum_probs=72.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHH
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (481)
...+|+|||||++|+.+|..|++ .|.+|+|+|+.. +.. + +
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~-------------~------------~------------ 188 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAK--AGKKVTVIDILDRPLG-------------V------------Y------------ 188 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSTTT-------------T------------T------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCeEEEEecCccccc-------------c------------c------------
Confidence 34799999999999999999998 789999999642 220 0 0
Q ss_pred hcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccC
Q 011610 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMN 207 (481)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~ 207 (481)
++ ..+.+.+.+.+++.|++++++++|.++..++ ..+.|.++
T Consensus 189 --~~------------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~v~~v~~~----- 229 (447)
T 1nhp_A 189 --LD------------------------------KEFTDVLTEEMEANNITIATGETVERYEGDG--RVQKVVTD----- 229 (447)
T ss_dssp --CC------------------------------HHHHHHHHHHHHTTTEEEEESCCEEEEECSS--BCCEEEES-----
T ss_pred --CC------------------------------HHHHHHHHHHHHhCCCEEEcCCEEEEEEccC--cEEEEEEC-----
Confidence 00 1233455566778899999999999998542 33355554
Q ss_pred ceEEEEcCeEEEccCCCh
Q 011610 208 LVECIEADYLLIASGSSQ 225 (481)
Q Consensus 208 ~~~~i~ad~VIlAtG~~g 225 (481)
+.++.+|.||+|+|..+
T Consensus 230 -~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 230 -KNAYDADLVVVAVGVRP 246 (447)
T ss_dssp -SCEEECSEEEECSCEEE
T ss_pred -CCEEECCEEEECcCCCC
Confidence 45799999999999755
No 197
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.03 E-value=5e-05 Score=78.35 Aligned_cols=100 Identities=24% Similarity=0.335 Sum_probs=72.4
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
..+|+|||||+.|+-+|..|++ .|.+|+|+|+.. +. .. .+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l--------------~~--~~--------------------- 210 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYAN--FGTKVTILEGAGEIL--------------SG--FE--------------------- 210 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSSS--------------TT--SC---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCcEEEEEcCCccc--------------cc--cC---------------------
Confidence 3689999999999999999999 789999999642 21 00 00
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
..+.+.+.+.+++.||+++++++|.++..++ +.+.+++.. .+.
T Consensus 211 ---------------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~--~g~ 253 (455)
T 1ebd_A 211 ---------------------------------KQMAAIIKKRLKKKGVEVVTNALAKGAEERE--DGVTVTYEA--NGE 253 (455)
T ss_dssp ---------------------------------HHHHHHHHHHHHHTTCEEEESEEEEEEEEET--TEEEEEEEE--TTE
T ss_pred ---------------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CeEEEEEEe--CCc
Confidence 0122334455677899999999999998754 456666541 112
Q ss_pred eEEEEcCeEEEccCCCh
Q 011610 209 VECIEADYLLIASGSSQ 225 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g 225 (481)
+.++.+|.||+|+|..+
T Consensus 254 ~~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 254 TKTIDADYVLVTVGRRP 270 (455)
T ss_dssp EEEEEESEEEECSCEEE
T ss_pred eeEEEcCEEEECcCCCc
Confidence 56899999999999655
No 198
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.02 E-value=5e-05 Score=78.81 Aligned_cols=104 Identities=22% Similarity=0.249 Sum_probs=74.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
..+|+|||||..|+-+|..|++ .|.+|+|+|+. .+. .. .+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l--------------~~--~~--------------------- 223 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSR--LGSKVTVVEFQPQIG--------------AS--MD--------------------- 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSS--------------SS--SC---------------------
T ss_pred CceEEEECCCHHHHHHHHHHHH--cCCEEEEEEeCCccc--------------cc--cC---------------------
Confidence 3589999999999999999999 78999999964 222 00 00
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEec-CCCCeEEEEEeecccC
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSD-NAGRKFLLKVEKRTMN 207 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~-~~~~~~~V~~~~~~~~ 207 (481)
..+.+.+.+.+++.||+++++++|+++..+ + ++.+.|.+.+...+
T Consensus 224 ---------------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~~v~~~~~~~g 269 (478)
T 1v59_A 224 ---------------------------------GEVAKATQKFLKKQGLDFKLSTKVISAKRNDD-KNVVEIVVEDTKTN 269 (478)
T ss_dssp ---------------------------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETT-TTEEEEEEEETTTT
T ss_pred ---------------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecC-CCeEEEEEEEcCCC
Confidence 122334455667789999999999999862 2 35566666521112
Q ss_pred ceEEEEcCeEEEccCCChh
Q 011610 208 LVECIEADYLLIASGSSQQ 226 (481)
Q Consensus 208 ~~~~i~ad~VIlAtG~~g~ 226 (481)
.+.++.+|.||+|+|..+.
T Consensus 270 ~~~~~~~D~vv~a~G~~p~ 288 (478)
T 1v59_A 270 KQENLEAEVLLVAVGRRPY 288 (478)
T ss_dssp EEEEEEESEEEECSCEEEC
T ss_pred CceEEECCEEEECCCCCcC
Confidence 2578999999999996553
No 199
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.01 E-value=3.2e-05 Score=79.75 Aligned_cols=97 Identities=26% Similarity=0.329 Sum_probs=72.0
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
.+|+|||||++|+.+|..|++ .|.+|+|+|+.. +.. . . .
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~--~g~~V~lv~~~~~~l~-------------~---~------------~---------- 207 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHR--LGAEVIVLEYMDRILP-------------T---M------------D---------- 207 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCT-------------T---S------------C----------
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCEEEEEecCCcccc-------------c---c------------C----------
Confidence 589999999999999999998 689999999642 210 0 0 0
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
..+.+.+.+.+++.|++++++++|+++..++ +.+.+++.+ +
T Consensus 208 --------------------------------~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v~v~~~~-----g 248 (455)
T 2yqu_A 208 --------------------------------LEVSRAAERVFKKQGLTIRTGVRVTAVVPEA--KGARVELEG-----G 248 (455)
T ss_dssp --------------------------------HHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TEEEEEETT-----S
T ss_pred --------------------------------HHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEEEEEECC-----C
Confidence 0112233445566799999999999998764 556666654 5
Q ss_pred EEEEcCeEEEccCCChh
Q 011610 210 ECIEADYLLIASGSSQQ 226 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g~ 226 (481)
.++.+|.||+|+|..+.
T Consensus 249 ~~i~~D~vv~A~G~~p~ 265 (455)
T 2yqu_A 249 EVLEADRVLVAVGRRPY 265 (455)
T ss_dssp CEEEESEEEECSCEEEC
T ss_pred eEEEcCEEEECcCCCcC
Confidence 68999999999997653
No 200
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.00 E-value=1.5e-05 Score=83.25 Aligned_cols=110 Identities=16% Similarity=0.159 Sum_probs=78.8
Q ss_pred CeEEEECCchHHHHHHHHHhccCC---CCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhH
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAP---KLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~---g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (481)
.+++|||||..|+-.|..+++ . |.+|+++|+.. +.. . .
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~--~~~~g~~Vtlv~~~~~~l~-------------~---~-------------------- 229 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNA--YKARGGQVDLAYRGDMILR-------------G---F-------------------- 229 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHH--HSCTTCEEEEEESSSSSST-------------T---S--------------------
T ss_pred CeEEEECCCHHHHHHHHHHHh--hccCcCeEEEEEcCCCccc-------------c---c--------------------
Confidence 589999999999999999988 5 88999999642 210 0 0
Q ss_pred HhcCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeeccc
Q 011610 127 FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTM 206 (481)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~ 206 (481)
+ ..+.+.+.+.+++.||+|+++++|.++..++ ++.+.|++.+
T Consensus 230 ----d------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~~v~~~~--- 271 (490)
T 1fec_A 230 ----D------------------------------SELRKQLTEQLRANGINVRTHENPAKVTKNA-DGTRHVVFES--- 271 (490)
T ss_dssp ----C------------------------------HHHHHHHHHHHHHTTEEEEETCCEEEEEECT-TSCEEEEETT---
T ss_pred ----C------------------------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEEEEEECC---
Confidence 0 1123345556678899999999999998764 3456777765
Q ss_pred CceEEEEcCeEEEccCCChhHHHH-HHHcCCCc
Q 011610 207 NLVECIEADYLLIASGSSQQGHRL-AAQLGHSI 238 (481)
Q Consensus 207 ~~~~~i~ad~VIlAtG~~g~g~~l-a~~~G~~i 238 (481)
+.++.+|.||+|+|..+....+ ++.+|+++
T Consensus 272 --G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~ 302 (490)
T 1fec_A 272 --GAEADYDVVMLAIGRVPRSQTLQLEKAGVEV 302 (490)
T ss_dssp --SCEEEESEEEECSCEEESCTTSCGGGGTCCB
T ss_pred --CcEEEcCEEEEccCCCcCccccCchhcCccC
Confidence 5589999999999976543223 45556554
No 201
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.99 E-value=4.9e-05 Score=81.10 Aligned_cols=35 Identities=34% Similarity=0.601 Sum_probs=31.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+|++|||+|++|+++|..|++. ++.+|+|||++
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~-~~~~v~~~e~g 57 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTEN-PKIKVLVIEKG 57 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTS-TTCCEEEEESS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEecC
Confidence 569999999999999999999984 58999999965
No 202
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.97 E-value=2.5e-05 Score=81.70 Aligned_cols=71 Identities=13% Similarity=0.155 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccC--ceEEEEcCeEEEccCCCh--hHHHHHHHcCC
Q 011610 161 SSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMN--LVECIEADYLLIASGSSQ--QGHRLAAQLGH 236 (481)
Q Consensus 161 a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~--~~~~i~ad~VIlAtG~~g--~g~~la~~~G~ 236 (481)
...+.+.+.+.+++.||+|++++.|++++. +...+.+.. .++ .++++.||.||.|+|-.+ ....++..++.
T Consensus 271 ~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~----~~~~~~~~~-~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~ 345 (502)
T 4g6h_A 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVEE----KQLLAKTKH-EDGKITEETIPYGTLIWATGNKARPVITDLFKKIPE 345 (502)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEECS----SEEEEEEEC-TTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGG
T ss_pred CHHHHHHHHHHHHhcceeeecCceEEEEeC----CceEEEEEe-cCcccceeeeccCEEEEccCCcCCHHHHhHHHhccc
Confidence 467778888899999999999999999963 333333321 111 135799999999999543 23445555443
No 203
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.96 E-value=5.7e-05 Score=78.30 Aligned_cols=116 Identities=22% Similarity=0.231 Sum_probs=78.2
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
.+|+|||||..|+-+|..|++ .|.+|+|+|+. .+.. + .
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~--------~-----~-------------------------- 217 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQR--LGADVTAVEFLGHVGG--------V-----G-------------------------- 217 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSC--------S-----S--------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHH--cCCEEEEEeccCccCC--------c-----c--------------------------
Confidence 589999999999999999998 68999999964 2220 0 0
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
++ ..+.+.+.+.+++.||+++++++|.++..++ ++.+.+++.+...+.+
T Consensus 218 ~~------------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~~~~~~~ 266 (474)
T 1zmd_A 218 ID------------------------------MEISKNFQRILQKQGFKFKLNTKVTGATKKS-DGKIDVSIEAASGGKA 266 (474)
T ss_dssp CC------------------------------HHHHHHHHHHHHHTTCEEECSEEEEEEEECT-TSCEEEEEEETTSCCC
T ss_pred cC------------------------------HHHHHHHHHHHHHCCCEEEeCceEEEEEEcC-CceEEEEEEecCCCCc
Confidence 00 1122344556678899999999999998764 2326666431111225
Q ss_pred EEEEcCeEEEccCCChhHHHH-HHHcCCCc
Q 011610 210 ECIEADYLLIASGSSQQGHRL-AAQLGHSI 238 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g~g~~l-a~~~G~~i 238 (481)
.++.+|.||+|+|..+....+ ++.+|+++
T Consensus 267 ~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~ 296 (474)
T 1zmd_A 267 EVITCDVLLVCIGRRPFTKNLGLEELGIEL 296 (474)
T ss_dssp EEEEESEEEECSCEEECCTTSSHHHHTCCC
T ss_pred eEEEcCEEEECcCCCcCCCcCCchhcCCcc
Confidence 689999999999976542211 45566554
No 204
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.96 E-value=5.2e-05 Score=77.68 Aligned_cols=111 Identities=23% Similarity=0.297 Sum_probs=79.5
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
..+|+|||||..|+-+|..|++ .|.+|+++|+.. +.. . .
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~--~G~~Vtlv~~~~~~l~-------------~--~----------------------- 188 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIK--ANMHVTLLDTAARVLE-------------R--V----------------------- 188 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSTTT-------------T--T-----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCEEEEEEeCCcccc-------------c--h-----------------------
Confidence 3689999999999999999999 689999999642 210 0 0
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEe--cCCCCeEEEEEeeccc
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASS--DNAGRKFLLKVEKRTM 206 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~--~~~~~~~~V~~~~~~~ 206 (481)
++ ..+.+.+.+.+++.||+++++++|.++.. ++ +....|++.+
T Consensus 189 -~~------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~v~~v~~~~--- 233 (431)
T 1q1r_A 189 -TA------------------------------PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ-QKVTAVLCED--- 233 (431)
T ss_dssp -SC------------------------------HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTT-CCEEEEEETT---
T ss_pred -hh------------------------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCC-CcEEEEEeCC---
Confidence 00 11122334455677999999999999986 43 3444677765
Q ss_pred CceEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 207 NLVECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 207 ~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
+.++.+|.||+|+|..+.. .+++.+|+.+
T Consensus 234 --G~~i~~D~Vv~a~G~~p~~-~l~~~~gl~~ 262 (431)
T 1q1r_A 234 --GTRLPADLVIAGIGLIPNC-ELASAAGLQV 262 (431)
T ss_dssp --SCEEECSEEEECCCEEECC-HHHHHTTCCB
T ss_pred --CCEEEcCEEEECCCCCcCc-chhhccCCCC
Confidence 5789999999999976542 4677788765
No 205
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.94 E-value=5.1e-05 Score=78.58 Aligned_cols=113 Identities=19% Similarity=0.241 Sum_probs=77.1
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
.+++|||||..|+-.|..+++ .|.+|+++|+. .+. .. .+
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l--------------~~--~d---------------------- 214 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWAR--LGAEVTVVEFAPRCA--------------PT--LD---------------------- 214 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSS--------------TT--SC----------------------
T ss_pred ceEEEECCCHHHHHHHHHHHH--hCCEEEEEecCCccc--------------cc--CC----------------------
Confidence 589999999999999999998 68999999964 221 00 00
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHH-HhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEA-KHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~-~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
..+.+.+.+.+ ++.||+++++++|.+++.++ +.+.|.+.. .++.
T Consensus 215 --------------------------------~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~-~~g~ 259 (468)
T 2qae_A 215 --------------------------------EDVTNALVGALAKNEKMKFMTSTKVVGGTNNG--DSVSLEVEG-KNGK 259 (468)
T ss_dssp --------------------------------HHHHHHHHHHHHHHTCCEEECSCEEEEEEECS--SSEEEEEEC-C---
T ss_pred --------------------------------HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcC--CeEEEEEEc-CCCc
Confidence 11223445556 77899999999999998764 446666541 0111
Q ss_pred eEEEEcCeEEEccCCChhHHHH-HHHcCCCc
Q 011610 209 VECIEADYLLIASGSSQQGHRL-AAQLGHSI 238 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g~g~~l-a~~~G~~i 238 (481)
..++.+|.||+|+|..+....+ ++.+|+++
T Consensus 260 ~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~ 290 (468)
T 2qae_A 260 RETVTCEALLVSVGRRPFTGGLGLDKINVAK 290 (468)
T ss_dssp EEEEEESEEEECSCEEECCTTSCHHHHTCCB
T ss_pred eEEEECCEEEECCCcccCCCCCCchhcCCcc
Confidence 2679999999999976542111 45566654
No 206
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.91 E-value=0.00013 Score=75.20 Aligned_cols=147 Identities=11% Similarity=0.152 Sum_probs=81.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
..+|+|||||.+|+-+|..|++..++.+|+++++.... ...... .+...+. .+.+. ..+..
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~-------------~p~~~~---~~~~~~~--~p~~~-~~~~~ 287 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL-------------KPADDS---PFVNEVF--APKFT-DLIYS 287 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC-------------CBCCCC---HHHHGGG--SHHHH-HHHHH
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC-------------cCccCC---ccchhcc--ChhHH-HHHhc
Confidence 45899999999999999999985448899999965321 000000 1111111 11121 12233
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecC--CChHHHHHHHH-HHHH-hCCCEEEcCceEEEEEecCCCCeEEEEEeecc
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVS--DSSSSVIDCLL-TEAK-HRGVVLQTGKVVTTASSDNAGRKFLLKVEKRT 205 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~--~~a~~~~~~l~-~~~~-~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 205 (481)
.....-..+++...- ..|+.. .-...+.+.+. +... ..|++++++++|+++..++ +.+.|++.+..
T Consensus 288 l~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~--~~~~v~~~~~~ 357 (463)
T 3s5w_A 288 REHAERERLLREYHN--------TNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATA--QGIELALRDAG 357 (463)
T ss_dssp SCHHHHHHHHHHTGG--------GTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEET--TEEEEEEEETT
T ss_pred CCHHHHHHHHHHhhc--------cCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecC--CEEEEEEEEcC
Confidence 333322233332210 001000 00112222222 2222 2699999999999998764 67878776422
Q ss_pred cCceEEEEcCeEEEccCCCh
Q 011610 206 MNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 206 ~~~~~~i~ad~VIlAtG~~g 225 (481)
++...++.+|.||+|||-.+
T Consensus 358 ~g~~~~~~~D~Vv~AtG~~p 377 (463)
T 3s5w_A 358 SGELSVETYDAVILATGYER 377 (463)
T ss_dssp TCCEEEEEESEEEECCCEEC
T ss_pred CCCeEEEECCEEEEeeCCCC
Confidence 33345799999999999544
No 207
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.88 E-value=4.1e-06 Score=86.78 Aligned_cols=36 Identities=33% Similarity=0.419 Sum_probs=30.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+||+|||||++|+.+|..|++.+++.+|+|||+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~ 40 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQ 40 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCC
Confidence 457999999999999999999984334999999975
No 208
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.86 E-value=2.3e-06 Score=88.61 Aligned_cols=38 Identities=18% Similarity=0.344 Sum_probs=31.9
Q ss_pred CCeEEEECCchHHHHHHHHHhc-cCC----CCcEEEEeCC-CCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKT-VAP----KLNVVIIEKG-KPL 87 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~-~~~----g~~V~llE~~-~~g 87 (481)
.+||+|||||++|+.||..|++ ..+ +.+|+|||+. .++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~g 46 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPW 46 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCC
Confidence 4799999999999999999987 533 7899999975 444
No 209
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.86 E-value=4.9e-05 Score=78.97 Aligned_cols=109 Identities=15% Similarity=0.203 Sum_probs=76.2
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
.+++|||||..|+-.|..|++ .|.+|+++|+.. +.. . .+ +.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~-------------~---~d------------~~-------- 227 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHG--LGSETHLVIRGETVLR-------------K---FD------------EC-------- 227 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHH--TTCEEEEECSSSSSCT-------------T---SC------------HH--------
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCceEEEEeCCcccc-------------c---cC------------HH--------
Confidence 589999999999999999998 689999999642 210 0 00 00
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCC-eEEEEEeecccCc
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGR-KFLLKVEKRTMNL 208 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~-~~~V~~~~~~~~~ 208 (481)
+.+.+.+.+++.||+++++++|+++..++ ++ .+.|++.+
T Consensus 228 ----------------------------------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~~v~~~~----- 267 (479)
T 2hqm_A 228 ----------------------------------IQNTITDHYVKEGINVHKLSKIVKVEKNV-ETDKLKIHMND----- 267 (479)
T ss_dssp ----------------------------------HHHHHHHHHHHHTCEEECSCCEEEEEECC--CCCEEEEETT-----
T ss_pred ----------------------------------HHHHHHHHHHhCCeEEEeCCEEEEEEEcC-CCcEEEEEECC-----
Confidence 11133445566799999999999998754 23 36677765
Q ss_pred e-EEEEcCeEEEccCCChhHHHH-HHHcCCCc
Q 011610 209 V-ECIEADYLLIASGSSQQGHRL-AAQLGHSI 238 (481)
Q Consensus 209 ~-~~i~ad~VIlAtG~~g~g~~l-a~~~G~~i 238 (481)
+ .++.+|.||+|+|..+.. .+ ++.+|+++
T Consensus 268 G~~~i~~D~vv~a~G~~p~~-~l~l~~~gl~~ 298 (479)
T 2hqm_A 268 SKSIDDVDELIWTIGRKSHL-GMGSENVGIKL 298 (479)
T ss_dssp SCEEEEESEEEECSCEEECC-CSSGGGGTCCB
T ss_pred CcEEEEcCEEEECCCCCCcc-ccChhhcCceE
Confidence 5 689999999999976543 33 34455543
No 210
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.85 E-value=0.0002 Score=69.54 Aligned_cols=102 Identities=19% Similarity=0.330 Sum_probs=71.5
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
..+|+|||+|..|+-.|..|++ .+.+|+++++.... . .+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~----------------~-~~---------------------- 183 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSN--IASEVHLIHRRDGF----------------R-AE---------------------- 183 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTT--TSSEEEEECSSSSC----------------C-CC----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHh--cCCeEEEEEeCCcc----------------c-cC----------------------
Confidence 3589999999999999999998 68899999854211 0 00
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeeccc-Cc
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTM-NL 208 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~-~~ 208 (481)
..+.+.+.+.+++.||+++++++|.++..++ ++...|++.+... +.
T Consensus 184 --------------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~~~g~ 230 (320)
T 1trb_A 184 --------------------------------KILIKRLMDKVENGNIILHTNRTLEEVTGDQ-MGVTGVRLRDTQNSDN 230 (320)
T ss_dssp --------------------------------HHHHHHHHHHHHTSSEEEECSCEEEEEEECS-SSEEEEEEECCTTCCC
T ss_pred --------------------------------HHHHHHHHHhcccCCeEEEcCceeEEEEcCC-CceEEEEEEeccCCCc
Confidence 0112234445677899999999999998764 3444566653111 23
Q ss_pred eEEEEcCeEEEccCCCh
Q 011610 209 VECIEADYLLIASGSSQ 225 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g 225 (481)
..++.+|.||+|+|..+
T Consensus 231 ~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 231 IESLDVAGLFVAIGHSP 247 (320)
T ss_dssp CEEEECSEEEECSCEEE
T ss_pred eEEEEcCEEEEEeCCCC
Confidence 46899999999999543
No 211
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.84 E-value=5.3e-05 Score=79.12 Aligned_cols=112 Identities=16% Similarity=0.206 Sum_probs=77.9
Q ss_pred CeEEEECCchHHHHHHHHHhccCC-CCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAP-KLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~-g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
.+++|||||..|+-.|..|++..+ |.+|+|+|+.. +.. . .
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-------------~---~---------------------- 233 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR-------------G---F---------------------- 233 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT-------------T---S----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc-------------c---c----------------------
Confidence 589999999999999999988211 88999999542 210 0 0
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
+ ..+.+.+.+.+++.||+++++++|.++..++ ++.+.|++.+
T Consensus 234 --d------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~~v~~~~----- 275 (495)
T 2wpf_A 234 --D------------------------------ETIREEVTKQLTANGIEIMTNENPAKVSLNT-DGSKHVTFES----- 275 (495)
T ss_dssp --C------------------------------HHHHHHHHHHHHHTTCEEEESCCEEEEEECT-TSCEEEEETT-----
T ss_pred --C------------------------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CceEEEEECC-----
Confidence 0 0112234455677899999999999998764 3456777765
Q ss_pred eEEEEcCeEEEccCCChhHHHH-HHHcCCCc
Q 011610 209 VECIEADYLLIASGSSQQGHRL-AAQLGHSI 238 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g~g~~l-a~~~G~~i 238 (481)
+.++.+|.||+|+|..+....+ ++.+|+.+
T Consensus 276 G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~ 306 (495)
T 2wpf_A 276 GKTLDVDVVMMAIGRIPRTNDLQLGNVGVKL 306 (495)
T ss_dssp SCEEEESEEEECSCEEECCGGGTGGGTTCCB
T ss_pred CcEEEcCEEEECCCCcccccccchhhcCccC
Confidence 5689999999999976543223 45556554
No 212
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.83 E-value=0.0001 Score=76.60 Aligned_cols=108 Identities=18% Similarity=0.209 Sum_probs=76.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
..+|+|||||++|+-+|..|++ .|.+|+|+|+.. +.. .
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~----------------~----------------------- 224 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVE--LGKKVRMIERNDHIGT----------------I----------------------- 224 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHH--TTCEEEEECCGGGTTS----------------S-----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHh--cCCeEEEEEeCCchhh----------------c-----------------------
Confidence 4689999999999999999998 689999999542 210 0
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
++ ..+.+.+.+.+++.|++++++++|+++..++ +.+.+.++
T Consensus 225 -~~------------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~v~~v~~~------ 265 (480)
T 3cgb_A 225 -YD------------------------------GDMAEYIYKEADKHHIEILTNENVKAFKGNE--RVEAVETD------ 265 (480)
T ss_dssp -SC------------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEESS--BEEEEEET------
T ss_pred -CC------------------------------HHHHHHHHHHHHHcCcEEEcCCEEEEEEcCC--cEEEEEEC------
Confidence 00 1123345566778899999999999998643 44456554
Q ss_pred eEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 209 VECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
+.++.+|.||+|+|..+.. .+++.+|+.+
T Consensus 266 ~~~i~~D~vi~a~G~~p~~-~~l~~~g~~~ 294 (480)
T 3cgb_A 266 KGTYKADLVLVSVGVKPNT-DFLEGTNIRT 294 (480)
T ss_dssp TEEEECSEEEECSCEEESC-GGGTTSCCCB
T ss_pred CCEEEcCEEEECcCCCcCh-HHHHhCCccc
Confidence 3579999999999975532 2344555443
No 213
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.83 E-value=1.3e-05 Score=81.15 Aligned_cols=40 Identities=25% Similarity=0.241 Sum_probs=34.7
Q ss_pred CCCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCC
Q 011610 47 TSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLS 88 (481)
Q Consensus 47 ~~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~ 88 (481)
....+||+|||||++|+++|+.|++ .|.+|+|+|+. .+|+
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~--~g~~v~v~E~~~~~GG 66 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLAS--SGQRVLIVDRRPHIGG 66 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSSG
T ss_pred cCCCCCEEEECccHHHHHHHHHHHH--CCCceEEEeccCCCCC
Confidence 3457899999999999999999999 79999999964 6663
No 214
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.83 E-value=1.5e-05 Score=80.07 Aligned_cols=37 Identities=22% Similarity=0.327 Sum_probs=33.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC--CCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG--KPL 87 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~--~~g 87 (481)
..+||+|||||++|++||+.|++ .|++|+|+|+. .+|
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~--~G~~V~VlE~~~~~vG 81 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTR--AGHDVTILEANANRVG 81 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH--TSCEEEEECSCSSCCB
T ss_pred CCceEEEECCCHHHHHHHHHHHH--CCCcEEEEeccccccC
Confidence 46899999999999999999999 78999999954 665
No 215
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.79 E-value=1.3e-05 Score=82.14 Aligned_cols=35 Identities=20% Similarity=0.351 Sum_probs=31.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (481)
+++||+|||||++|+++|+.|++ .|++|+|||+..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~--~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQ--HDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHH--TTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHH--CCCeEEEEcCCC
Confidence 56899999999999999999999 799999999654
No 216
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.78 E-value=1.5e-05 Score=80.92 Aligned_cols=38 Identities=29% Similarity=0.274 Sum_probs=33.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCC-CCcEEEEeCC-CCCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAP-KLNVVIIEKG-KPLS 88 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~-g~~V~llE~~-~~g~ 88 (481)
.++||+|||||++|++||+.|++ . |.+|+|+|+. .+|+
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~--~~g~~v~v~E~~~~~GG 45 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVAT--QLDKRVLVLERRPHIGG 45 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHH--HSCCCEEEECSSSSSSG
T ss_pred ccCCEEEECCCHHHHHHHHHHHH--hCCCCEEEEeCCCCCCC
Confidence 46899999999999999999999 5 8999999954 7774
No 217
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.76 E-value=1.4e-05 Score=90.92 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=32.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC-CCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG-KPL 87 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~-~~g 87 (481)
..+||+|||||++|++||+.|++ .|+ +|+|+|+. .+|
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~--~G~~~Vtv~E~~~~~G 224 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLAR--LGYSDITIFEKQEYVG 224 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHH--TTCCCEEEEESSSSCS
T ss_pred CCCEEEEECccHHHHHHHHHHHh--cCCCcEEEEeCCCCCC
Confidence 46899999999999999999999 688 79999975 454
No 218
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.74 E-value=0.00013 Score=73.08 Aligned_cols=102 Identities=20% Similarity=0.194 Sum_probs=75.1
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
.+|+|||||+.|+-+|..|++ .|.+|+++|+.. +. . .+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l--------------~---~~---------------------- 182 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAE--AGYHVKLIHRGAMFL--------------G---LD---------------------- 182 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHH--TTCEEEEECSSSCCT--------------T---CC----------------------
T ss_pred CcEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCCeec--------------c---CC----------------------
Confidence 589999999999999999999 689999999642 21 0 00
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
..+.+.+.+.+++.||+++++++|.++. . + .|++++ +
T Consensus 183 --------------------------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~--~--~v~~~~-----g 219 (367)
T 1xhc_A 183 --------------------------------EELSNMIKDMLEETGVKFFLNSELLEAN--E--E--GVLTNS-----G 219 (367)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTEEEECSCCEEEEC--S--S--EEEETT-----E
T ss_pred --------------------------------HHHHHHHHHHHHHCCCEEEcCCEEEEEE--e--e--EEEECC-----C
Confidence 0122334455677899999999999996 2 2 255554 5
Q ss_pred EEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 210 ECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
. +.+|.||+|+|..+... +++.+|++.
T Consensus 220 ~-i~~D~vi~a~G~~p~~~-ll~~~gl~~ 246 (367)
T 1xhc_A 220 F-IEGKVKICAIGIVPNVD-LARRSGIHT 246 (367)
T ss_dssp E-EECSCEEEECCEEECCH-HHHHTTCCB
T ss_pred E-EEcCEEEECcCCCcCHH-HHHhCCCCC
Confidence 5 99999999999766533 677788764
No 219
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.74 E-value=0.00028 Score=68.85 Aligned_cols=97 Identities=18% Similarity=0.183 Sum_probs=69.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
...|+|||+|.+|+-+|..|++ .+.+|+++++..... .
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~--~g~~v~~v~~~~~~~-------------~--------------------------- 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTK--YGSKVFMLVRKDHLR-------------A--------------------------- 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTT--TSSEEEEECSSSSCC-------------S---------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHh--cCCEEEEEEcCCccC-------------C---------------------------
Confidence 3579999999999999999998 688999998542110 0
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHh-CCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKH-RGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~-~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
...+.+.+.+ .||+++++++|.++..++ ++...|++.+...+.
T Consensus 211 -----------------------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~-~~~~~v~~~~~~~g~ 254 (338)
T 3itj_A 211 -----------------------------------STIMQKRAEKNEKIEILYNTVALEAKGDG-KLLNALRIKNTKKNE 254 (338)
T ss_dssp -----------------------------------CHHHHHHHHHCTTEEEECSEEEEEEEESS-SSEEEEEEEETTTTE
T ss_pred -----------------------------------CHHHHHHHHhcCCeEEeecceeEEEEccc-CcEEEEEEEECCCCc
Confidence 0012223333 499999999999998765 344557766423344
Q ss_pred eEEEEcCeEEEccCCC
Q 011610 209 VECIEADYLLIASGSS 224 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~ 224 (481)
+.++.+|.||+|+|..
T Consensus 255 ~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 255 ETDLPVSGLFYAIGHT 270 (338)
T ss_dssp EEEEECSEEEECSCEE
T ss_pred eEEEEeCEEEEEeCCC
Confidence 5789999999999953
No 220
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.73 E-value=0.00016 Score=74.78 Aligned_cols=101 Identities=20% Similarity=0.232 Sum_probs=71.9
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
.+|+|||||..|+-+|..|++ .|.+|+|+|+.. +. .. .+
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtli~~~~~~l--------------~~--~~---------------------- 217 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGR--IGSEVTVVEFASEIV--------------PT--MD---------------------- 217 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHH--HTCEEEEECSSSSSS--------------TT--SC----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCcEEEEEcCCccc--------------cc--cc----------------------
Confidence 589999999999999999998 689999999642 21 00 00
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
..+.+.+.+.+++.||+++++++|.++..++ +.+.|++.+..++.+
T Consensus 218 --------------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~~~~g~~ 263 (470)
T 1dxl_A 218 --------------------------------AEIRKQFQRSLEKQGMKFKLKTKVVGVDTSG--DGVKLTVEPSAGGEQ 263 (470)
T ss_dssp --------------------------------HHHHHHHHHHHHHSSCCEECSEEEEEEECSS--SSEEEEEEESSSCCC
T ss_pred --------------------------------HHHHHHHHHHHHHcCCEEEeCCEEEEEEEcC--CeEEEEEEecCCCcc
Confidence 0112334456677899999999999998654 446666542111224
Q ss_pred EEEEcCeEEEccCCCh
Q 011610 210 ECIEADYLLIASGSSQ 225 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g 225 (481)
.++.+|.||+|+|..+
T Consensus 264 ~~~~~D~vv~a~G~~p 279 (470)
T 1dxl_A 264 TIIEADVVLVSAGRTP 279 (470)
T ss_dssp EEEEESEEECCCCEEE
T ss_pred eEEECCEEEECCCCCc
Confidence 6899999999999655
No 221
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.73 E-value=0.00023 Score=73.52 Aligned_cols=95 Identities=17% Similarity=0.257 Sum_probs=71.7
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
.+|+|||||..|+-+|..+++ .|.+|+++|+.. +. . .+
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l--------------~---~~---------------------- 215 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFAR--LGSKVTVLARNTLFF--------------R---ED---------------------- 215 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCTTT--------------T---SC----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHH--cCCEEEEEEECCccC--------------C---CC----------------------
Confidence 589999999999999999998 688999999542 11 0 00
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
..+.+.+.+.+++.||+++++++|.++..++ +.+.|.++ +
T Consensus 216 --------------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~~~v~~~------~ 255 (467)
T 1zk7_A 216 --------------------------------PAIGEAVTAAFRAEGIEVLEHTQASQVAHMD--GEFVLTTT------H 255 (467)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTCEEETTCCEEEEEEET--TEEEEEET------T
T ss_pred --------------------------------HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEEEEEC------C
Confidence 1122344556677899999999999998754 56667665 3
Q ss_pred EEEEcCeEEEccCCChh
Q 011610 210 ECIEADYLLIASGSSQQ 226 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g~ 226 (481)
.++.+|.||+|+|..+.
T Consensus 256 ~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 256 GELRADKLLVATGRTPN 272 (467)
T ss_dssp EEEEESEEEECSCEEES
T ss_pred cEEEcCEEEECCCCCcC
Confidence 57999999999997653
No 222
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.72 E-value=0.00021 Score=74.55 Aligned_cols=109 Identities=19% Similarity=0.228 Sum_probs=76.5
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
.+++|||||..|+-.|..+++ .|.+|+++|+.. +. .. .+
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l--------------~~--~d---------------------- 222 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTE--LGVPVTVVASQDHVL--------------PY--ED---------------------- 222 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHH--TTCCEEEECSSSSSS--------------CC--SS----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCeEEEEEcCCccc--------------cc--cC----------------------
Confidence 579999999999999999998 689999999542 21 00 00
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
..+.+.+.+.+++.||+|+++++|+++..++ +.+.|.+.+ +
T Consensus 223 --------------------------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~--~~v~v~~~~-----g 263 (499)
T 1xdi_A 223 --------------------------------ADAALVLEESFAERGVRLFKNARAASVTRTG--AGVLVTMTD-----G 263 (499)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTCEEETTCCEEEEEECS--SSEEEEETT-----S
T ss_pred --------------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CEEEEEECC-----C
Confidence 0112334456677899999999999998764 446666554 5
Q ss_pred EEEEcCeEEEccCCChhHHHH-HHHcCCCc
Q 011610 210 ECIEADYLLIASGSSQQGHRL-AAQLGHSI 238 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g~g~~l-a~~~G~~i 238 (481)
.++.+|.||+|+|..+....+ ++.+|+++
T Consensus 264 ~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~ 293 (499)
T 1xdi_A 264 RTVEGSHALMTIGSVPNTSGLGLERVGIQL 293 (499)
T ss_dssp CEEEESEEEECCCEEECCSSSCTTTTTCCC
T ss_pred cEEEcCEEEECCCCCcCCCcCCchhcCceE
Confidence 689999999999976532111 34455543
No 223
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.68 E-value=0.00019 Score=74.11 Aligned_cols=112 Identities=21% Similarity=0.252 Sum_probs=75.6
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
.+|+|||||..|+-.|..|++ .|.+|+|+|+.. +. .. .+ .
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l--------------~~--~~------------~--------- 212 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKN--YGVDVTIVEFLPRAL--------------PN--ED------------A--------- 212 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSS--------------TT--SC------------H---------
T ss_pred CeEEEECCcHHHHHHHHHHHH--cCCeEEEEEcCCccc--------------cc--cC------------H---------
Confidence 589999999999999999998 689999999642 21 00 00 0
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
.+.+.+.+.+++.||+++++++|.++..++ +.+.+.+.+ ++..
T Consensus 213 ---------------------------------~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~--~g~~ 255 (464)
T 2a8x_A 213 ---------------------------------DVSKEIEKQFKKLGVTILTATKVESIADGG--SQVTVTVTK--DGVA 255 (464)
T ss_dssp ---------------------------------HHHHHHHHHHHHHTCEEECSCEEEEEEECS--SCEEEEEES--SSCE
T ss_pred ---------------------------------HHHHHHHHHHHHcCCEEEeCcEEEEEEEcC--CeEEEEEEc--CCce
Confidence 011223344566799999999999998764 445566541 1223
Q ss_pred EEEEcCeEEEccCCChhHHHH-HHHcCCCc
Q 011610 210 ECIEADYLLIASGSSQQGHRL-AAQLGHSI 238 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g~g~~l-a~~~G~~i 238 (481)
.++.+|.||+|+|..+....+ ++.+|+.+
T Consensus 256 ~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~ 285 (464)
T 2a8x_A 256 QELKAEKVLQAIGFAPNVEGYGLDKAGVAL 285 (464)
T ss_dssp EEEEESEEEECSCEEECCSSSCHHHHTCCB
T ss_pred EEEEcCEEEECCCCCccCCCCCchhcCCcc
Confidence 679999999999965532111 45556554
No 224
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.67 E-value=3e-05 Score=80.83 Aligned_cols=39 Identities=36% Similarity=0.536 Sum_probs=33.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC-CCCCCc
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLSK 89 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~k 89 (481)
..+||+|||||++||+||+.|++ .|++|+|+|+ +.+|+.
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~--~g~~v~v~E~~~~~GG~ 51 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKI--HGLNVTVFEAEGKAGGK 51 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHT--TSCEEEEECSSSSSCSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCcEEEEEeCCCCCCc
Confidence 46899999999999999999999 7999999995 477753
No 225
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.67 E-value=0.00027 Score=73.55 Aligned_cols=97 Identities=21% Similarity=0.273 Sum_probs=70.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
..+|+|||||..|+-+|..|++ .|.+|+|+|+.. +.. . .
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~-------------~--~----------------------- 233 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQR--KGKEVVLIDVVDTCLA-------------G--Y----------------------- 233 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSTTT-------------T--T-----------------------
T ss_pred CceEEEECCCHHHHHHHHHHHH--CCCeEEEEEcccchhh-------------h--H-----------------------
Confidence 4689999999999999999998 689999999642 210 0 0
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
++ ..+.+.+.+.+++.||+++++++|+++..+ +....|.++
T Consensus 234 -~~------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~v~~v~~~------ 274 (490)
T 2bc0_A 234 -YD------------------------------RDLTDLMAKNMEEHGIQLAFGETVKEVAGN--GKVEKIITD------ 274 (490)
T ss_dssp -SC------------------------------HHHHHHHHHHHHTTTCEEEETCCEEEEECS--SSCCEEEES------
T ss_pred -HH------------------------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEcC--CcEEEEEEC------
Confidence 00 112234455667889999999999999853 233345553
Q ss_pred eEEEEcCeEEEccCCCh
Q 011610 209 VECIEADYLLIASGSSQ 225 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g 225 (481)
+.++.+|.||+|+|..+
T Consensus 275 g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 275 KNEYDVDMVILAVGFRP 291 (490)
T ss_dssp SCEEECSEEEECCCEEE
T ss_pred CcEEECCEEEECCCCCc
Confidence 56899999999999654
No 226
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.67 E-value=8.9e-05 Score=77.07 Aligned_cols=114 Identities=17% Similarity=0.222 Sum_probs=77.4
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
..+|+|||||..|+-.|..|++ .|.+|+|+|+.. +.. . .+ +
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~--~G~~Vtlv~~~~~~l~-------------~---~~------------~-------- 226 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYST--LGSRLDVVEMMDGLMQ-------------G---AD------------R-------- 226 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH--HTCEEEEECSSSSSST-------------T---SC------------H--------
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEECCcccc-------------c---cC------------H--------
Confidence 3589999999999999999998 689999999642 210 0 00 0
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
.+.+.+.+.+++.||+++++++|.+++.++ +.+.|++.+ ..+.
T Consensus 227 ----------------------------------~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~--~~~~v~~~~-~~~~ 269 (482)
T 1ojt_A 227 ----------------------------------DLVKVWQKQNEYRFDNIMVNTKTVAVEPKE--DGVYVTFEG-ANAP 269 (482)
T ss_dssp ----------------------------------HHHHHHHHHHGGGEEEEECSCEEEEEEEET--TEEEEEEES-SSCC
T ss_pred ----------------------------------HHHHHHHHHHHhcCCEEEECCEEEEEEEcC--CeEEEEEec-cCCC
Confidence 112233445667899999999999998764 556666652 1111
Q ss_pred eEEEEcCeEEEccCCChhHHHH-HHHcCCCc
Q 011610 209 VECIEADYLLIASGSSQQGHRL-AAQLGHSI 238 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g~g~~l-a~~~G~~i 238 (481)
+.++.+|.||+|+|..+....+ ++.+|+++
T Consensus 270 g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~ 300 (482)
T 1ojt_A 270 KEPQRYDAVLVAAGRAPNGKLISAEKAGVAV 300 (482)
T ss_dssp SSCEEESCEEECCCEEECGGGTTGGGTTCCC
T ss_pred ceEEEcCEEEECcCCCcCCCCCChhhcCcee
Confidence 3468899999999976543222 45666554
No 227
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.64 E-value=0.00034 Score=72.38 Aligned_cols=99 Identities=19% Similarity=0.164 Sum_probs=71.9
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
.+|+|||+|..|+-.|..+++ .|.+|+++++.. +. ..
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l--------------~~-------------------------- 218 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWAR--LGAEVTVLEAMDKFL--------------PA-------------------------- 218 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSSS--------------TT--------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCcEEEEecCCCcC--------------cc--------------------------
Confidence 579999999999999999998 689999999642 11 00
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
++ ..+.+.+.+.+++.||+++++++|.+++.++ +.+.+.+.+ .++.
T Consensus 219 ~~------------------------------~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~--~~~~v~~~~--~~g~ 264 (476)
T 3lad_A 219 VD------------------------------EQVAKEAQKILTKQGLKILLGARVTGTEVKN--KQVTVKFVD--AEGE 264 (476)
T ss_dssp SC------------------------------HHHHHHHHHHHHHTTEEEEETCEEEEEEECS--SCEEEEEES--SSEE
T ss_pred cC------------------------------HHHHHHHHHHHHhCCCEEEECCEEEEEEEcC--CEEEEEEEe--CCCc
Confidence 00 1122344456677899999999999998765 556666653 1112
Q ss_pred EEEEcCeEEEccCCCh
Q 011610 210 ECIEADYLLIASGSSQ 225 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g 225 (481)
.++.+|.||+|+|..+
T Consensus 265 ~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 265 KSQAFDKLIVAVGRRP 280 (476)
T ss_dssp EEEEESEEEECSCEEE
T ss_pred EEEECCEEEEeeCCcc
Confidence 6799999999999654
No 228
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.64 E-value=3.2e-05 Score=77.57 Aligned_cols=37 Identities=27% Similarity=0.249 Sum_probs=32.9
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC-CCCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLS 88 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~ 88 (481)
++||+|||||++|+++|+.|++ .|.+|+|+|+ +.+|+
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~--~g~~v~v~E~~~~~GG 38 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKK--LNKKVLVIEKRNHIGG 38 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGG--GTCCEEEECSSSSSSG
T ss_pred CCCEEEECcCHHHHHHHHHHHh--CCCcEEEEecCCCCCc
Confidence 3699999999999999999999 6899999996 46764
No 229
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.63 E-value=0.00067 Score=70.49 Aligned_cols=103 Identities=16% Similarity=0.129 Sum_probs=72.0
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhcC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (481)
.+|+|||||..|+-.|..+++ .|.+|+++++....+ . .+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~l~-------------~---~d----------------------- 224 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTG--IGLDTTVMMRSIPLR-------------G---FD----------------------- 224 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCSST-------------T---SC-----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCceEEEEcCcccc-------------c---CC-----------------------
Confidence 479999999999999999999 689999998642210 0 00
Q ss_pred ChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceE
Q 011610 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVE 210 (481)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~ 210 (481)
.++.+.+.+.+++.||++++++.|.++...+ ++.+.|++.+...+...
T Consensus 225 -------------------------------~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~-~~~~~v~~~~~~~g~~~ 272 (488)
T 3dgz_A 225 -------------------------------QQMSSLVTEHMESHGTQFLKGCVPSHIKKLP-TNQLQVTWEDHASGKED 272 (488)
T ss_dssp -------------------------------HHHHHHHHHHHHHTTCEEEETEEEEEEEECT-TSCEEEEEEETTTTEEE
T ss_pred -------------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcC-CCcEEEEEEeCCCCeeE
Confidence 0122334455677899999999999998754 35566666531112223
Q ss_pred EEEcCeEEEccCCChh
Q 011610 211 CIEADYLLIASGSSQQ 226 (481)
Q Consensus 211 ~i~ad~VIlAtG~~g~ 226 (481)
++.+|.||+|+|-.+.
T Consensus 273 ~~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 273 TGTFDTVLWAIGRVPE 288 (488)
T ss_dssp EEEESEEEECSCEEES
T ss_pred EEECCEEEEcccCCcc
Confidence 6899999999996543
No 230
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.62 E-value=0.0003 Score=74.90 Aligned_cols=106 Identities=20% Similarity=0.303 Sum_probs=77.2
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
.+|+|||||..|+-+|..+++ .|.+|+++++.. +.. . .+
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~-------------~---~~---------------------- 227 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRE--RGIEVTLVEMANQVMP-------------P---ID---------------------- 227 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCT-------------T---SC----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHh--CCCeEEEEecCCcccc-------------c---CC----------------------
Confidence 579999999999999999999 689999998542 210 0 00
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
..+.+.+.+.+++.||+++++++|.++..++ + .|.+.+ +
T Consensus 228 --------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~--~v~~~~-----g 266 (588)
T 3ics_A 228 --------------------------------YEMAAYVHEHMKNHDVELVFEDGVDALEENG--A--VVRLKS-----G 266 (588)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEGGG--T--EEEETT-----S
T ss_pred --------------------------------HHHHHHHHHHHHHcCCEEEECCeEEEEecCC--C--EEEECC-----C
Confidence 0112344455667899999999999998654 3 355554 5
Q ss_pred EEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 210 ECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
.++.+|.||+|+|..+.. .+++.+|+++
T Consensus 267 ~~i~~D~Vi~a~G~~p~~-~~l~~~g~~~ 294 (588)
T 3ics_A 267 SVIQTDMLILAIGVQPES-SLAKGAGLAL 294 (588)
T ss_dssp CEEECSEEEECSCEEECC-HHHHHTTCCB
T ss_pred CEEEcCEEEEccCCCCCh-HHHHhcCceE
Confidence 689999999999976543 3577777765
No 231
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.57 E-value=0.00021 Score=73.76 Aligned_cols=96 Identities=27% Similarity=0.308 Sum_probs=67.6
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
.+|+|||||++|+-+|..|++ .|.+|+|+|+.. +. . ..+ .
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l--------------~--~~~------------~--------- 212 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRK--LGAQVSVVEARERIL--------------P--TYD------------S--------- 212 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--HTCEEEEECSSSSSS--------------T--TSC------------H---------
T ss_pred CeEEEECcCHHHHHHHHHHHH--CCCeEEEEEcCCccc--------------c--ccC------------H---------
Confidence 589999999999999999998 689999999642 21 0 000 0
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
.+.+.+.+.+++.||+++++++|.++.. + + +.+...+ +..
T Consensus 213 ---------------------------------~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~--~-v~v~~~~---G~~ 252 (458)
T 1lvl_A 213 ---------------------------------ELTAPVAESLKKLGIALHLGHSVEGYEN-G--C-LLANDGK---GGQ 252 (458)
T ss_dssp ---------------------------------HHHHHHHHHHHHHTCEEETTCEEEEEET-T--E-EEEECSS---SCC
T ss_pred ---------------------------------HHHHHHHHHHHHCCCEEEECCEEEEEEe-C--C-EEEEECC---Cce
Confidence 1112334455667999999999999975 4 3 4444221 212
Q ss_pred EEEEcCeEEEccCCCh
Q 011610 210 ECIEADYLLIASGSSQ 225 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g 225 (481)
.++.+|.||+|+|..+
T Consensus 253 ~~i~~D~vv~a~G~~p 268 (458)
T 1lvl_A 253 LRLEADRVLVAVGRRP 268 (458)
T ss_dssp CEECCSCEEECCCEEE
T ss_pred EEEECCEEEECcCCCc
Confidence 5799999999999655
No 232
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.55 E-value=0.00067 Score=69.71 Aligned_cols=97 Identities=19% Similarity=0.231 Sum_probs=70.0
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
.+|+|||||..|+-.|..+++ .|.+|+++|+.. +. .. .
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l--------------~~-~------------------------ 188 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSN--QNYNVNLIDGHERVL--------------YK-Y------------------------ 188 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHT--TTCEEEEEESSSSTT--------------TT-T------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHh--cCCEEEEEEcCCchh--------------hh-h------------------------
Confidence 579999999999999999998 689999999642 21 00 0
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeE-EEEEeecccCc
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKF-LLKVEKRTMNL 208 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~-~V~~~~~~~~~ 208 (481)
++ ..+.+.+.+.+++.||+++++++|.++..++ +.+ .+.+ +
T Consensus 189 ~~------------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~v~~v~~-~----- 230 (452)
T 2cdu_A 189 FD------------------------------KEFTDILAKDYEAHGVNLVLGSKVAAFEEVD--DEIITKTL-D----- 230 (452)
T ss_dssp SC------------------------------HHHHHHHHHHHHHTTCEEEESSCEEEEEEET--TEEEEEET-T-----
T ss_pred hh------------------------------hhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC--CeEEEEEe-C-----
Confidence 00 1122334456678899999999999998643 444 3443 3
Q ss_pred eEEEEcCeEEEccCCChh
Q 011610 209 VECIEADYLLIASGSSQQ 226 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g~ 226 (481)
+.++.+|.||+|+|..+.
T Consensus 231 g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 231 GKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp SCEEEESEEEECCCEEEC
T ss_pred CCEEECCEEEECcCCCCC
Confidence 567999999999996553
No 233
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.55 E-value=0.00053 Score=71.04 Aligned_cols=102 Identities=18% Similarity=0.063 Sum_probs=71.7
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
.+|+|||||..|+-.|..+++ .|.+|+++++.. +.+ . .+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~-------------~---~d---------------------- 227 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSA--LGSKTSLMIRHDKVLR-------------S---FD---------------------- 227 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCT-------------T---SC----------------------
T ss_pred ccEEEECCCHHHHHHHHHHHH--cCCeEEEEEeCCcccc-------------c---cC----------------------
Confidence 589999999999999999999 689999999642 210 0 00
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCC-eEEEEEeecccCc
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGR-KFLLKVEKRTMNL 208 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~-~~~V~~~~~~~~~ 208 (481)
..+.+.+.+.+++.||+++++++|.+++.++ ++ .+.|.+.+...+.
T Consensus 228 --------------------------------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~-~~~~~~v~~~~~~~g~ 274 (478)
T 3dk9_A 228 --------------------------------SMISTNCTEELENAGVEVLKFSQVKEVKKTL-SGLEVSMVTAVPGRLP 274 (478)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTCEEETTEEEEEEEECS-SSEEEEEEECCTTSCC
T ss_pred --------------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcC-CCcEEEEEEccCCCCc
Confidence 0112234455677899999999999998764 34 3566665311111
Q ss_pred --eEEEEcCeEEEccCCCh
Q 011610 209 --VECIEADYLLIASGSSQ 225 (481)
Q Consensus 209 --~~~i~ad~VIlAtG~~g 225 (481)
+..+.+|.||+|+|-.+
T Consensus 275 ~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 275 VMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp EEEEEEEESEEEECSCEEE
T ss_pred ccceEEEcCEEEEeecccc
Confidence 26899999999999654
No 234
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.54 E-value=7e-05 Score=77.99 Aligned_cols=41 Identities=22% Similarity=0.298 Sum_probs=35.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCC-CcEEEEeCC-CCCCceE
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPK-LNVVIIEKG-KPLSKVK 91 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g-~~V~llE~~-~~g~k~~ 91 (481)
+.+||+|||||++|+++|+.|++ .| .+|+|+|+. .+|+++.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~--~g~~~v~v~E~~~~~GG~~~ 50 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTE--LGYKNWHLYECNDTPGGLSR 50 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHH--TTCCSEEEEESSSSSSGGGC
T ss_pred cCCCEEEECcCHHHHHHHHHHHH--cCCCCEEEEeCCCCCCCeee
Confidence 46899999999999999999999 56 799999964 7776544
No 235
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.52 E-value=0.00053 Score=70.44 Aligned_cols=108 Identities=26% Similarity=0.323 Sum_probs=76.0
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
.+|+|||||..|+-+|..+++ .|.+|+++++.. +.. . .
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~-------------~--------------------------~ 187 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAA--QGKNVTMIVRGERVLR-------------R--------------------------S 187 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSTTT-------------T--------------------------T
T ss_pred CeEEEECCCHHHHHHHHHHHh--CCCeEEEEEcCCccch-------------h--------------------------h
Confidence 489999999999999999998 689999999642 210 0 0
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
++ ..+.+.+.+.+++. |++++++.|.++..++ ....+.++ +
T Consensus 188 ~~------------------------------~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~--~v~~v~~~------g 228 (449)
T 3kd9_A 188 FD------------------------------KEVTDILEEKLKKH-VNLRLQEITMKIEGEE--RVEKVVTD------A 228 (449)
T ss_dssp SC------------------------------HHHHHHHHHHHTTT-SEEEESCCEEEEECSS--SCCEEEET------T
T ss_pred cC------------------------------HHHHHHHHHHHHhC-cEEEeCCeEEEEeccC--cEEEEEeC------C
Confidence 00 11223344455666 9999999999997542 32234333 5
Q ss_pred EEEEcCeEEEccCCChhHHHHHHHcCCCcc
Q 011610 210 ECIEADYLLIASGSSQQGHRLAAQLGHSIV 239 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g~g~~la~~~G~~i~ 239 (481)
.++.+|.||+|+|..+.. .+++.+|+++.
T Consensus 229 ~~i~~D~Vv~a~G~~p~~-~l~~~~gl~~~ 257 (449)
T 3kd9_A 229 GEYKAELVILATGIKPNI-ELAKQLGVRIG 257 (449)
T ss_dssp EEEECSEEEECSCEEECC-HHHHHTTCCBC
T ss_pred CEEECCEEEEeeCCccCH-HHHHhCCccCC
Confidence 689999999999976543 46778887753
No 236
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.46 E-value=0.0001 Score=74.35 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=32.8
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLS 88 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~ 88 (481)
++||+|||||++|+++|+.|++ .|.+|+|+|+. .+|+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~--~g~~v~v~E~~~~~GG 40 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE--KGHQVHIIDQRDHIGG 40 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCEEEEEESSSSSSG
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCcEEEEEecCCcCC
Confidence 4799999999999999999999 68999999954 6663
No 237
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.44 E-value=0.0013 Score=63.84 Aligned_cols=97 Identities=27% Similarity=0.279 Sum_probs=66.8
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhcC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (481)
.+|+|||+|+.|+-.|..|++ .+.+|+++++.... . . .
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~--~g~~V~~i~~~~~~----------------~--~-----------~----------- 193 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSE--YVKNVTIIEYMPKY----------------M--C-----------E----------- 193 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTT--TBSEEEEECSSSSC----------------C--S-----------C-----------
T ss_pred CeEEEECCCHHHHHHHHHHHh--hCCcEEEEEcCCcc----------------C--C-----------C-----------
Confidence 579999999999999999998 68899999853210 0 0 0
Q ss_pred ChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceE
Q 011610 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVE 210 (481)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~ 210 (481)
..+.+.+.+.||+++++++|.++..++ +....|.+.+..++...
T Consensus 194 -----------------------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~ 237 (319)
T 3cty_A 194 -----------------------------------NAYVQEIKKRNIPYIMNAQVTEIVGDG-KKVTGVKYKDRTTGEEK 237 (319)
T ss_dssp -----------------------------------HHHHHHHHHTTCCEECSEEEEEEEESS-SSEEEEEEEETTTCCEE
T ss_pred -----------------------------------HHHHHHHhcCCcEEEcCCeEEEEecCC-ceEEEEEEEEcCCCceE
Confidence 001122346799999999999998764 22445665421122234
Q ss_pred EEEcCeEEEccCCCh
Q 011610 211 CIEADYLLIASGSSQ 225 (481)
Q Consensus 211 ~i~ad~VIlAtG~~g 225 (481)
++.+|.||+|+|..+
T Consensus 238 ~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 238 LIETDGVFIYVGLIP 252 (319)
T ss_dssp EECCSEEEECCCEEE
T ss_pred EEecCEEEEeeCCcc
Confidence 799999999999544
No 238
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.39 E-value=0.0017 Score=62.68 Aligned_cols=97 Identities=22% Similarity=0.285 Sum_probs=67.2
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhcC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (481)
.+|+|||+|++|+-+|..|++ .+.+|+++++.... . .+ .
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~----------------~-~~------------~---------- 183 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAG--IVEHVTLLEFAPEM----------------K-AD------------Q---------- 183 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TBSEEEEECSSSSC----------------C-SC------------H----------
T ss_pred CEEEEECCCHHHHHHHHHHHH--hCCEEEEEEeCccc----------------C-cc------------H----------
Confidence 579999999999999999998 68899999854210 0 00 0
Q ss_pred ChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHh-CCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKH-RGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~-~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
.+.+.+.+ .||+++++++|+++..++ +....|++.+..++..
T Consensus 184 ------------------------------------~~~~~l~~~~gv~v~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~ 226 (310)
T 1fl2_A 184 ------------------------------------VLQDKLRSLKNVDIILNAQTTEVKGDG-SKVVGLEYRDRVSGDI 226 (310)
T ss_dssp ------------------------------------HHHHHHHTCTTEEEESSEEEEEEEESS-SSEEEEEEEETTTCCE
T ss_pred ------------------------------------HHHHHHhhCCCeEEecCCceEEEEcCC-CcEEEEEEEECCCCcE
Confidence 11122334 589999999999998754 3333566654222333
Q ss_pred EEEEcCeEEEccCCCh
Q 011610 210 ECIEADYLLIASGSSQ 225 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g 225 (481)
.++.+|.||+|+|..+
T Consensus 227 ~~i~~D~vi~a~G~~p 242 (310)
T 1fl2_A 227 HNIELAGIFVQIGLLP 242 (310)
T ss_dssp EEEECSEEEECSCEEE
T ss_pred EEEEcCEEEEeeCCcc
Confidence 5799999999999544
No 239
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.37 E-value=0.00076 Score=66.81 Aligned_cols=111 Identities=16% Similarity=0.168 Sum_probs=72.5
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhcC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (481)
.+|+|||+|..|+-.|..|++ .+.+|+++++.... .. .+ .+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~--~g~~V~lv~~~~~~-------------~~---~~-------------~~-------- 204 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIK--NAASVTLVHRGHEF-------------QG---HG-------------KT-------- 204 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTT--TSSEEEEECSSSSC-------------SS---CS-------------HH--------
T ss_pred CcEEEECCCHHHHHHHHHHHh--cCCEEEEEEcCCCC-------------CC---CH-------------HH--------
Confidence 589999999999999999998 68899999854211 00 00 00
Q ss_pred ChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceE
Q 011610 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVE 210 (481)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~ 210 (481)
.+.+.+..++.||+++++++|.++..++ +....|.+.. .++...
T Consensus 205 ----------------------------------~~~l~~~~~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~-~~g~~~ 248 (360)
T 3ab1_A 205 ----------------------------------AHEVERARANGTIDVYLETEVASIEESN-GVLTRVHLRS-SDGSKW 248 (360)
T ss_dssp ----------------------------------HHSSHHHHHHTSEEEESSEEEEEEEEET-TEEEEEEEEE-TTCCEE
T ss_pred ----------------------------------HHHHHHHhhcCceEEEcCcCHHHhccCC-CceEEEEEEe-cCCCeE
Confidence 0112233456799999999999998764 2323555541 122236
Q ss_pred EEEcCeEEEccCCChhHHHHHHHcCCC
Q 011610 211 CIEADYLLIASGSSQQGHRLAAQLGHS 237 (481)
Q Consensus 211 ~i~ad~VIlAtG~~g~g~~la~~~G~~ 237 (481)
.+.+|.||+|+|..+.. .+++.+|+.
T Consensus 249 ~i~~D~vi~a~G~~p~~-~~l~~~~~~ 274 (360)
T 3ab1_A 249 TVEADRLLILIGFKSNL-GPLARWDLE 274 (360)
T ss_dssp EEECSEEEECCCBCCSC-GGGGGSSCC
T ss_pred EEeCCEEEECCCCCCCH-HHHHhhccc
Confidence 89999999999965532 234444544
No 240
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.36 E-value=0.002 Score=62.12 Aligned_cols=98 Identities=20% Similarity=0.186 Sum_probs=66.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
...|+|||+|..|+-+|..|++ .+.+|+++++.... . .+ .
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~-------------~----~~------------~--------- 182 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLAN--ICKKVYLIHRRDGF-------------R----CA------------P--------- 182 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHT--TSSEEEEECSSSSC-------------C----SC------------H---------
T ss_pred CCEEEEECCCHHHHHHHHHHHh--cCCEEEEEeeCCcc-------------C----CC------------H---------
Confidence 3689999999999999999998 68899999854210 0 00 0
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHH-hCCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAK-HRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~-~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
+ +.+.+. +.||+++++++|.++..++ ++...|.+.+..++.
T Consensus 183 ----~---------------------------------~~~~l~~~~gv~v~~~~~v~~i~~~~-~~v~~v~~~~~~~g~ 224 (311)
T 2q0l_A 183 ----I---------------------------------TLEHAKNNDKIEFLTPYVVEEIKGDA-SGVSSLSIKNTATNE 224 (311)
T ss_dssp ----H---------------------------------HHHHHHTCTTEEEETTEEEEEEEEET-TEEEEEEEEETTTCC
T ss_pred ----H---------------------------------HHHHHhhCCCeEEEeCCEEEEEECCC-CcEeEEEEEecCCCc
Confidence 0 111222 3689999999999998763 232355555211222
Q ss_pred eEEEEcCeEEEccCCCh
Q 011610 209 VECIEADYLLIASGSSQ 225 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g 225 (481)
..++.+|.||+|+|..+
T Consensus 225 ~~~i~~D~vi~a~G~~p 241 (311)
T 2q0l_A 225 KRELVVPGFFIFVGYDV 241 (311)
T ss_dssp EEEEECSEEEECSCEEE
T ss_pred eEEEecCEEEEEecCcc
Confidence 34799999999999543
No 241
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.33 E-value=0.0029 Score=61.67 Aligned_cols=101 Identities=18% Similarity=0.218 Sum_probs=69.9
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
..+|+|||+|..|+-.|..|++ .+.+|+++++.... . . ....
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~--~g~~V~~v~~~~~~-------------~-----~-----------~~~~------- 193 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLD--TARRITLIHRRPQF-------------R-----A-----------HEAS------- 193 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTT--TSSEEEEECSSSSC-------------C-----S-----------CHHH-------
T ss_pred CCEEEEECCCHHHHHHHHHHHh--hCCEEEEEEcCCcc-------------C-----c-----------cHHH-------
Confidence 3589999999999999999998 68899999854210 0 0 0000
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
.+.+.+.+++.||+++++++|.++..++ +...|++....++..
T Consensus 194 -----------------------------------~~~l~~~l~~~gv~v~~~~~v~~i~~~~--~~~~v~~~~~~~g~~ 236 (335)
T 2zbw_A 194 -----------------------------------VKELMKAHEEGRLEVLTPYELRRVEGDE--RVRWAVVFHNQTQEE 236 (335)
T ss_dssp -----------------------------------HHHHHHHHHTTSSEEETTEEEEEEEESS--SEEEEEEEETTTCCE
T ss_pred -----------------------------------HHHHHhccccCCeEEecCCcceeEccCC--CeeEEEEEECCCCce
Confidence 0123344567799999999999998743 544566652112223
Q ss_pred EEEEcCeEEEccCCCh
Q 011610 210 ECIEADYLLIASGSSQ 225 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g 225 (481)
.++.+|.||+|+|..+
T Consensus 237 ~~i~~D~vi~a~G~~p 252 (335)
T 2zbw_A 237 LALEVDAVLILAGYIT 252 (335)
T ss_dssp EEEECSEEEECCCEEE
T ss_pred EEEecCEEEEeecCCC
Confidence 6899999999999655
No 242
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.29 E-value=0.0029 Score=66.27 Aligned_cols=102 Identities=15% Similarity=0.099 Sum_probs=67.8
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhcC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (481)
.+++|||||..|+-.|..+++ .|.+|+|+++..+.+ . .+
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~--~G~~Vtlv~~~~~l~-------------~---~d----------------------- 249 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAG--IGLDVTVMVRSILLR-------------G---FD----------------------- 249 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCSST-------------T---SC-----------------------
T ss_pred CeEEEECCcHHHHHHHHHHHH--cCCeEEEEecccccc-------------c---CC-----------------------
Confidence 469999999999999999998 688999998642210 0 00
Q ss_pred ChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCC--CCeEEEEEeecccCc
Q 011610 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNA--GRKFLLKVEKRTMNL 208 (481)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~--~~~~~V~~~~~~~~~ 208 (481)
.++.+.+.+.+++.||++++++.+.++...++ ++.+.+.... .+++
T Consensus 250 -------------------------------~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~-~~g~ 297 (519)
T 3qfa_A 250 -------------------------------QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQS-TNSE 297 (519)
T ss_dssp -------------------------------HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEE-SSSS
T ss_pred -------------------------------HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEE-CCCc
Confidence 01123344556678999999998888865320 1345555432 1111
Q ss_pred -eEEEEcCeEEEccCCCh
Q 011610 209 -VECIEADYLLIASGSSQ 225 (481)
Q Consensus 209 -~~~i~ad~VIlAtG~~g 225 (481)
...+.+|.||+|+|-.+
T Consensus 298 ~~~~~~~D~vi~a~G~~p 315 (519)
T 3qfa_A 298 EIIEGEYNTVMLAIGRDA 315 (519)
T ss_dssp CEEEEEESEEEECSCEEE
T ss_pred EEEEEECCEEEEecCCcc
Confidence 14678999999999654
No 243
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.28 E-value=0.0031 Score=60.82 Aligned_cols=108 Identities=18% Similarity=0.224 Sum_probs=75.1
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhcC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (481)
.+|+|||+|..|+-+|..|++ .+.+|+++++.... .. + .
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~--~g~~v~~~~~~~~~-------------~~----~------------~---------- 193 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSS--YSTKVYLIHRRDTF-------------KA----Q------------P---------- 193 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HSSEEEEECSSSSC-------------CS----C------------H----------
T ss_pred CEEEEECCCHHHHHHHHHHHH--hCCeEEEEEeCCCC-------------Cc----C------------H----------
Confidence 589999999999999999998 57889998854211 00 0 0
Q ss_pred ChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHH-HhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEA-KHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~-~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
+ +.+.+ ++.||+++++++|.++..++ +...|++.+...+..
T Consensus 194 ---~---------------------------------~~~~~~~~~gv~~~~~~~v~~i~~~~--~~~~v~~~~~~~g~~ 235 (323)
T 3f8d_A 194 ---I---------------------------------YVETVKKKPNVEFVLNSVVKEIKGDK--VVKQVVVENLKTGEI 235 (323)
T ss_dssp ---H---------------------------------HHHHHHTCTTEEEECSEEEEEEEESS--SEEEEEEEETTTCCE
T ss_pred ---H---------------------------------HHHHHHhCCCcEEEeCCEEEEEeccC--ceeEEEEEECCCCce
Confidence 0 00122 23599999999999998653 555676654222333
Q ss_pred EEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 210 ECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
.++.+|.||+|+|..+. ..+++.+|+.+
T Consensus 236 ~~~~~D~vv~a~G~~p~-~~~~~~~g~~~ 263 (323)
T 3f8d_A 236 KELNVNGVFIEIGFDPP-TDFAKSNGIET 263 (323)
T ss_dssp EEEECSEEEECCCEECC-HHHHHHTTCCB
T ss_pred EEEEcCEEEEEECCCCC-hhHHhhcCeee
Confidence 57999999999997664 24677777665
No 244
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.22 E-value=0.00024 Score=77.68 Aligned_cols=38 Identities=18% Similarity=0.261 Sum_probs=33.4
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCC
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPL 87 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g 87 (481)
...+||+|||||++|++||+.|++ .|++|+|+|+. .+|
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~--~G~~Vtlie~~~~~G 425 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLME--SGYTVHLTDTAEKIG 425 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSTT
T ss_pred cCCceEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCcC
Confidence 346899999999999999999999 79999999975 454
No 245
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.22 E-value=0.00029 Score=76.17 Aligned_cols=39 Identities=15% Similarity=0.364 Sum_probs=34.5
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC-CCCCC
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLS 88 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~ 88 (481)
...+||+|||||++|+++|+.|++ .|++|+|+|+ +.+|+
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~--~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQS--FGMDVTLLEARDRVGG 144 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHH--TTCEEEEECSSSSSBT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHH--CCCeEEEEecCCCCCC
Confidence 456899999999999999999999 7999999995 56764
No 246
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.21 E-value=0.0043 Score=60.31 Aligned_cols=96 Identities=20% Similarity=0.193 Sum_probs=66.1
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhcC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (481)
.+|+|||+|..|+-.|..|++ .+.+|+++++.... . .+ .
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~-------------~----~~------------~---------- 191 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTK--FADEVTVIHRRDTL-------------R----AN------------K---------- 191 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--TCSEEEEECSSSSC-------------C----SC------------H----------
T ss_pred CEEEEECCCHHHHHHHHHHHh--cCCEEEEEeCCCcC-------------C----cc------------h----------
Confidence 589999999999999999998 68899999854211 0 00 0
Q ss_pred ChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHH-hCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAK-HRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~-~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
.+.+.+. +.||+++++++|+++..++ +...|++.+..++..
T Consensus 192 ------------------------------------~~~~~l~~~~gv~i~~~~~v~~i~~~~--~v~~v~~~~~~~g~~ 233 (325)
T 2q7v_A 192 ------------------------------------VAQARAFANPKMKFIWDTAVEEIQGAD--SVSGVKLRNLKTGEV 233 (325)
T ss_dssp ------------------------------------HHHHHHHTCTTEEEECSEEEEEEEESS--SEEEEEEEETTTCCE
T ss_pred ------------------------------------HHHHHHHhcCCceEecCCceEEEccCC--cEEEEEEEECCCCcE
Confidence 0011122 3589999999999998643 444566652112223
Q ss_pred EEEEcCeEEEccCCCh
Q 011610 210 ECIEADYLLIASGSSQ 225 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g 225 (481)
.++.+|.||+|+|-.+
T Consensus 234 ~~i~~D~vi~a~G~~p 249 (325)
T 2q7v_A 234 SELATDGVFIFIGHVP 249 (325)
T ss_dssp EEEECSEEEECSCEEE
T ss_pred EEEEcCEEEEccCCCC
Confidence 5799999999999654
No 247
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.20 E-value=0.0031 Score=61.17 Aligned_cols=97 Identities=19% Similarity=0.208 Sum_probs=69.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
..+|+|||+|..|+-+|..|++ .+.+|+++++.... ...+ .
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~--~~~~v~~~~~~~~~----------------~~~~-----------------~---- 194 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEP--IAKEVSIIHRRDKF----------------RAHE-----------------H---- 194 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTT--TBSEEEEECSSSSC----------------SSCH-----------------H----
T ss_pred CCEEEEECCCHhHHHHHHHHHh--hCCeEEEEEecCcC----------------CccH-----------------H----
Confidence 3589999999999999999998 67889988854210 0000 0
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
. .+.+++.||+++.+++|.++..++ +...|.+.+...+.+
T Consensus 195 ----~----------------------------------~~~l~~~gv~~~~~~~v~~i~~~~--~~~~v~~~~~~~g~~ 234 (332)
T 3lzw_A 195 ----S----------------------------------VENLHASKVNVLTPFVPAELIGED--KIEQLVLEEVKGDRK 234 (332)
T ss_dssp ----H----------------------------------HHHHHHSSCEEETTEEEEEEECSS--SCCEEEEEETTSCCE
T ss_pred ----H----------------------------------HHHHhcCCeEEEeCceeeEEecCC--ceEEEEEEecCCCce
Confidence 0 112456799999999999998764 455666664333445
Q ss_pred EEEEcCeEEEccCCCh
Q 011610 210 ECIEADYLLIASGSSQ 225 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g 225 (481)
.++.+|.||+|+|..+
T Consensus 235 ~~~~~D~vv~a~G~~p 250 (332)
T 3lzw_A 235 EILEIDDLIVNYGFVS 250 (332)
T ss_dssp EEEECSEEEECCCEEC
T ss_pred EEEECCEEEEeeccCC
Confidence 7899999999999544
No 248
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.20 E-value=0.0024 Score=62.22 Aligned_cols=99 Identities=20% Similarity=0.153 Sum_probs=67.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
..+|+|||+|..|+-+|..|++ .+.+|+++++.... .. ...+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~--~g~~V~lv~~~~~~----------------~~-------------~~~~------- 200 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTK--YGSKVYIIHRRDAF----------------RA-------------SKIM------- 200 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTT--TSSEEEEECSSSSC----------------CS-------------CHHH-------
T ss_pred CCeEEEECCChHHHHHHHHHHh--cCCeEEEEecCCcC----------------Cc-------------cHHH-------
Confidence 3589999999999999999998 68899999864211 00 0000
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCC--CeEEEEEeecccC
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAG--RKFLLKVEKRTMN 207 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~--~~~~V~~~~~~~~ 207 (481)
..+.+++.||+++++++|.++..++ + ....|.+.+..++
T Consensus 201 --------------------------------------~~~~~~~~gv~i~~~~~v~~i~~~~-~~~~v~~v~~~~~~~g 241 (333)
T 1vdc_A 201 --------------------------------------QQRALSNPKIDVIWNSSVVEAYGDG-ERDVLGGLKVKNVVTG 241 (333)
T ss_dssp --------------------------------------HHHHHTCTTEEEECSEEEEEEEESS-SSSSEEEEEEEETTTC
T ss_pred --------------------------------------HHHHHhCCCeeEecCCceEEEeCCC-CccceeeEEEEecCCC
Confidence 0011235799999999999998754 2 2234555531123
Q ss_pred ceEEEEcCeEEEccCCCh
Q 011610 208 LVECIEADYLLIASGSSQ 225 (481)
Q Consensus 208 ~~~~i~ad~VIlAtG~~g 225 (481)
...++.+|.||+|+|..+
T Consensus 242 ~~~~i~~D~vi~a~G~~p 259 (333)
T 1vdc_A 242 DVSDLKVSGLFFAIGHEP 259 (333)
T ss_dssp CEEEEECSEEEECSCEEE
T ss_pred ceEEEecCEEEEEeCCcc
Confidence 346899999999999644
No 249
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.11 E-value=0.0038 Score=60.01 Aligned_cols=95 Identities=15% Similarity=0.140 Sum_probs=65.4
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhcC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (481)
..|+|||+|+.|+-+|..|++ .+.+|+++++.... . . ..
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~--~g~~v~~~~~~~~~----------------~--~-----------~~---------- 186 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLAN--ICSKIYLIHRRDEF----------------R--A-----------AP---------- 186 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHT--TSSEEEEECSSSSC----------------B--S-----------CH----------
T ss_pred CEEEEECCCHHHHHHHHHHHh--hCCEEEEEEeCCCC----------------C--C-----------CH----------
Confidence 589999999999999999998 68889988853210 0 0 00
Q ss_pred ChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceE
Q 011610 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVE 210 (481)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~ 210 (481)
..+.+.+++.||+++++++|.++..++ +....|++.. .++...
T Consensus 187 -----------------------------------~~~~~~~~~~gv~~~~~~~v~~i~~~~-~~~~~v~~~~-~~g~~~ 229 (315)
T 3r9u_A 187 -----------------------------------STVEKVKKNEKIELITSASVDEVYGDK-MGVAGVKVKL-KDGSIR 229 (315)
T ss_dssp -----------------------------------HHHHHHHHCTTEEEECSCEEEEEEEET-TEEEEEEEEC-TTSCEE
T ss_pred -----------------------------------HHHHHHHhcCCeEEEeCcEEEEEEcCC-CcEEEEEEEc-CCCCeE
Confidence 001112246799999999999998764 3334465551 122235
Q ss_pred EEEcCeEEEccCC
Q 011610 211 CIEADYLLIASGS 223 (481)
Q Consensus 211 ~i~ad~VIlAtG~ 223 (481)
++.+|.||+|+|.
T Consensus 230 ~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 230 DLNVPGIFTFVGL 242 (315)
T ss_dssp EECCSCEEECSCE
T ss_pred EeecCeEEEEEcC
Confidence 7999999999994
No 250
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.10 E-value=0.00044 Score=74.96 Aligned_cols=38 Identities=29% Similarity=0.311 Sum_probs=33.4
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC-CCC
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPL 87 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g 87 (481)
...+||+|||||++|+.||..|++ .|++|+|+|+. .+|
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~--~g~~V~lie~~~~~g 409 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAA--RGHQVTLFDAHSEIG 409 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHT--TTCEEEEEESSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCC
Confidence 346899999999999999999999 78999999975 454
No 251
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.10 E-value=0.00043 Score=76.63 Aligned_cols=39 Identities=15% Similarity=0.364 Sum_probs=34.4
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC-CCCCC
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLS 88 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~ 88 (481)
...+||+|||||++||+||+.|++ .|++|+|+|+ +.+|+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~--~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQS--FGMDVTLLEARDRVGG 315 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH--CCCcEEEEEecCcCCC
Confidence 356899999999999999999999 7999999995 56764
No 252
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.05 E-value=0.0016 Score=66.68 Aligned_cols=104 Identities=12% Similarity=0.168 Sum_probs=71.5
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
.+++|||||..|+-.|..+++ .|.+|+|+|+.. +. .. .+ ...
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~ll--------------~~--~d------------~~~------- 190 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYE--RGLHPTLIHRSDKIN--------------KL--MD------------ADM------- 190 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCEEEEEESSSCCS--------------TT--SC------------GGG-------
T ss_pred cEEEEECCccchhhhHHHHHh--cCCcceeeeeecccc--------------cc--cc------------chh-------
Confidence 479999999999999999999 689999999642 21 00 00 011
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
.+.+.+.+++.||+++++++|.+++. . .|.+++ +
T Consensus 191 -----------------------------------~~~~~~~l~~~gV~i~~~~~v~~~~~----~--~v~~~~-----g 224 (437)
T 4eqs_A 191 -----------------------------------NQPILDELDKREIPYRLNEEINAING----N--EITFKS-----G 224 (437)
T ss_dssp -----------------------------------GHHHHHHHHHTTCCEEESCCEEEEET----T--EEEETT-----S
T ss_pred -----------------------------------HHHHHHHhhccceEEEeccEEEEecC----C--eeeecC-----C
Confidence 11223345677999999999998853 2 255555 6
Q ss_pred EEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 210 ECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
+++.+|.||+|+|..+.. .+++..|+.+
T Consensus 225 ~~~~~D~vl~a~G~~Pn~-~~~~~~gl~~ 252 (437)
T 4eqs_A 225 KVEHYDMIIEGVGTHPNS-KFIESSNIKL 252 (437)
T ss_dssp CEEECSEEEECCCEEESC-GGGTTSSCCC
T ss_pred eEEeeeeEEEEeceecCc-HHHHhhhhhh
Confidence 789999999999965532 2444555543
No 253
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.01 E-value=0.0038 Score=61.08 Aligned_cols=98 Identities=14% Similarity=0.211 Sum_probs=66.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
..+|+|||+|..|+-.|..|++ .+.+|+++++.... . . ...+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~--~g~~V~l~~~~~~~-------------~---~-------------~~~~------- 196 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTR--FARSVTLVHRRDEF-------------R---A-------------SKIM------- 196 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTT--TCSEEEEECSSSSC-------------S---S-------------CTTH-------
T ss_pred CCEEEEECCCHHHHHHHHHHHH--hCCeEEEEEcCCcC-------------C---c-------------cHHH-------
Confidence 3689999999999999999998 68899999854210 0 0 0000
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
. .+.+++.||+++++++|.++..++ +...|.+.+..++..
T Consensus 197 -----------------------------------~---~~~~~~~gV~v~~~~~v~~i~~~~--~~~~v~~~~~~~g~~ 236 (335)
T 2a87_A 197 -----------------------------------L---DRARNNDKIRFLTNHTVVAVDGDT--TVTGLRVRDTNTGAE 236 (335)
T ss_dssp -----------------------------------H---HHHHHCTTEEEECSEEEEEEECSS--SCCEEEEEEETTSCC
T ss_pred -----------------------------------H---HHHhccCCcEEEeCceeEEEecCC--cEeEEEEEEcCCCce
Confidence 0 011235799999999999998653 333455442112223
Q ss_pred EEEEcCeEEEccCCCh
Q 011610 210 ECIEADYLLIASGSSQ 225 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g 225 (481)
.++.+|.||+|+|..+
T Consensus 237 ~~i~~D~vi~a~G~~p 252 (335)
T 2a87_A 237 TTLPVTGVFVAIGHEP 252 (335)
T ss_dssp EEECCSCEEECSCEEE
T ss_pred EEeecCEEEEccCCcc
Confidence 6899999999999654
No 254
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.99 E-value=0.0038 Score=61.65 Aligned_cols=106 Identities=15% Similarity=0.200 Sum_probs=69.3
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhcC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (481)
..|+|||+|.+|+-+|..|++ .|.+|+++++.... .... .+ ..+ .+
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~--~g~~V~lv~~~~~~-------------~~~~-~d------------~~~------~~ 212 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAK--NGSDIALYTSTTGL-------------NDPD-AD------------PSV------RL 212 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECC------------------------------------CTT------SC
T ss_pred CEEEEECCCcCHHHHHHHHHh--cCCeEEEEecCCCC-------------CCCC-CC------------CCc------cC
Confidence 489999999999999999998 68899999964211 0000 00 000 00
Q ss_pred ChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCC-CEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRG-VVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~G-v~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
...+.+.+.+.+++.| ++++.+++|.++..++ +.+.|++.+ +
T Consensus 213 ------------------------------~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~--~~~~v~~~~-----g 255 (369)
T 3d1c_A 213 ------------------------------SPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNN--GQYHISFDS-----G 255 (369)
T ss_dssp ------------------------------CHHHHHHHHHHHHTTCCEEEECSCCEEEEEEET--TEEEEEESS-----S
T ss_pred ------------------------------CHHHHHHHHHHHhhCCcEEEecCcEEEEEEecC--CceEEEecC-----C
Confidence 0122334444556776 9999999999997654 556677765 4
Q ss_pred EEEE-cCeEEEccCCChhH
Q 011610 210 ECIE-ADYLLIASGSSQQG 227 (481)
Q Consensus 210 ~~i~-ad~VIlAtG~~g~g 227 (481)
..+. +|.||+|+|..+..
T Consensus 256 ~~~~~~d~vi~a~G~~~~~ 274 (369)
T 3d1c_A 256 QSVHTPHEPILATGFDATK 274 (369)
T ss_dssp CCEEESSCCEECCCBCGGG
T ss_pred eEeccCCceEEeeccCCcc
Confidence 4454 69999999976643
No 255
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.98 E-value=0.0087 Score=63.69 Aligned_cols=32 Identities=13% Similarity=0.068 Sum_probs=28.9
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+|+|||||..|+-+|..|++ .|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLAS--LGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHH--cCCEEEEEECC
Confidence 479999999999999999999 68899999964
No 256
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.88 E-value=0.0022 Score=67.59 Aligned_cols=34 Identities=12% Similarity=0.143 Sum_probs=30.4
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (481)
..+|+|||+|.+|+-+|..|++ .+.+|+++++..
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~--~~~~Vtv~~r~~ 211 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAP--EVEHLTVFVRTP 211 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTT--TCSEEEEEESSC
T ss_pred cceEEEECCCchHHHHHHHHHh--hCCEEEEEECCC
Confidence 4689999999999999999998 689999999653
No 257
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.85 E-value=0.0027 Score=65.42 Aligned_cols=112 Identities=21% Similarity=0.216 Sum_probs=71.9
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
...|+|||||..|+-.|..+++ .|.+|+++++.. +.. . . .+ .
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~-------------~-~-~d------------~-------- 214 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRL--MGVQTHIIEMLDRALI-------------T-L-ED------------Q-------- 214 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCT-------------T-S-CC------------H--------
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCEEEEEEeCCcCCC-------------C-C-CC------------H--------
Confidence 3589999999999999999999 689999999642 210 0 0 00 0
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
++ .+.+.+.++ |+++++++|.++..++ ++.+.|.+.+ .++.
T Consensus 215 -----~~-----------------------------~~~l~~~l~---v~i~~~~~v~~i~~~~-~~~v~v~~~~-~~G~ 255 (466)
T 3l8k_A 215 -----DI-----------------------------VNTLLSILK---LNIKFNSPVTEVKKIK-DDEYEVIYST-KDGS 255 (466)
T ss_dssp -----HH-----------------------------HHHHHHHHC---CCEECSCCEEEEEEEE-TTEEEEEECC-TTSC
T ss_pred -----HH-----------------------------HHHHHhcCE---EEEEECCEEEEEEEcC-CCcEEEEEEe-cCCc
Confidence 11 111111111 8999999999998642 2456666651 1122
Q ss_pred eEEEEcCeEEEccCCChhHHHH-HHHcCCCc
Q 011610 209 VECIEADYLLIASGSSQQGHRL-AAQLGHSI 238 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g~g~~l-a~~~G~~i 238 (481)
..++.+|.||+|+|..+... + ++.+|+++
T Consensus 256 ~~~i~~D~vi~a~G~~p~~~-l~l~~~gl~~ 285 (466)
T 3l8k_A 256 KKSIFTNSVVLAAGRRPVIP-EGAREIGLSI 285 (466)
T ss_dssp CEEEEESCEEECCCEEECCC-TTTGGGTCCB
T ss_pred eEEEEcCEEEECcCCCcccc-cchhhcCcee
Confidence 34899999999999765433 3 45556554
No 258
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.73 E-value=0.01 Score=62.15 Aligned_cols=97 Identities=20% Similarity=0.274 Sum_probs=67.0
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhcC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (481)
.+|+|||||.+|+-+|..|++ .+.+|+++++.... . .+ .
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~--~g~~Vtlv~~~~~l-------------~----~~-----------------~----- 394 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAG--IVEHVTLLEFAPEM-------------K----AD-----------------Q----- 394 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--HBSEEEEECSSSSC-------------C----SC-----------------H-----
T ss_pred CeEEEECCCHHHHHHHHHHHh--hCCEEEEEEeCccc-------------C----cC-----------------H-----
Confidence 589999999999999999998 57899999853211 0 00 0
Q ss_pred ChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHh-CCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKH-RGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~-~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
.+.+.+.+ .||++++++.|+++..++ +....|++.+..++..
T Consensus 395 ------------------------------------~l~~~l~~~~gV~v~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~ 437 (521)
T 1hyu_A 395 ------------------------------------VLQDKVRSLKNVDIILNAQTTEVKGDG-SKVVGLEYRDRVSGDI 437 (521)
T ss_dssp ------------------------------------HHHHHHTTCTTEEEECSEEEEEEEECS-SSEEEEEEEETTTCCE
T ss_pred ------------------------------------HHHHHHhcCCCcEEEeCCEEEEEEcCC-CcEEEEEEEeCCCCce
Confidence 01122233 489999999999998754 3434566654222334
Q ss_pred EEEEcCeEEEccCCCh
Q 011610 210 ECIEADYLLIASGSSQ 225 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g 225 (481)
..+.+|.||+|+|..+
T Consensus 438 ~~i~~D~vi~a~G~~p 453 (521)
T 1hyu_A 438 HSVALAGIFVQIGLLP 453 (521)
T ss_dssp EEEECSEEEECCCEEE
T ss_pred EEEEcCEEEECcCCCC
Confidence 5799999999999543
No 259
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.71 E-value=0.0019 Score=68.16 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=30.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (481)
..+|+|||+|++|+-+|..|++ .+.+|+++++..
T Consensus 185 ~krV~VIG~G~tgve~a~~la~--~~~~Vtv~~r~~ 218 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAE--TAKELYVFQRTP 218 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTT--TBSEEEEEESSC
T ss_pred CCeEEEECCCccHHHHHHHHHh--hCCEEEEEEcCC
Confidence 4589999999999999999998 688999999653
No 260
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.44 E-value=0.0012 Score=71.34 Aligned_cols=61 Identities=16% Similarity=0.115 Sum_probs=40.8
Q ss_pred CCChHHHHHHHHHHHHhCCCEEEcCceEE--EEEecCCCC------eEEEEEeecccCceEEEEcCeEEEccC
Q 011610 158 SDSSSSVIDCLLTEAKHRGVVLQTGKVVT--TASSDNAGR------KFLLKVEKRTMNLVECIEADYLLIASG 222 (481)
Q Consensus 158 ~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~--~i~~~~~~~------~~~V~~~~~~~~~~~~i~ad~VIlAtG 222 (481)
......+.+.|.+.+.+ |..|+++++|+ +|..++ ++ .+.|+... .+...++.||+||+|+-
T Consensus 343 ~GG~~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~-~g~~~~~~~V~V~~~~--~G~~~~~~aD~VIvTvP 411 (721)
T 3ayj_A 343 VTENVEFIRNLFLKAQN-VGAGKLVVQVRQERVANAC-HSGTASARAQLLSYDS--HNAVHSEAYDFVILAVP 411 (721)
T ss_dssp SSSTHHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEE-ECSSSSCCEEEEEEET--TCCEEEEEESEEEECSC
T ss_pred CCcHHHHHHHHHHhccc-CCceEeCCEEEeeeEEECC-CCCccccceEEEEEec--CCceEEEEcCEEEECCC
Confidence 34567788888887643 44567799999 998764 23 36664431 12223799999999874
No 261
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.43 E-value=0.0068 Score=62.37 Aligned_cols=33 Identities=21% Similarity=0.251 Sum_probs=28.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
..+|+|||||..|+-+|..+.+ .|. +|+++++.
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r--~Ga~~Vtiv~r~ 297 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIR--QGATSVKCLYRR 297 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHH--TTCSEEEEECSS
T ss_pred CCEEEEECCChhHHHHHHHHHH--cCCCEEEEEEeC
Confidence 4689999999999999999988 566 49999854
No 262
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.42 E-value=0.026 Score=58.04 Aligned_cols=50 Identities=12% Similarity=0.045 Sum_probs=33.4
Q ss_pred CCCEEEcCceEEEEEecCCCC-eE-EEEEeecc------------cCceEEEEcCeEEEccCCCh
Q 011610 175 RGVVLQTGKVVTTASSDNAGR-KF-LLKVEKRT------------MNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 175 ~Gv~i~~~~~V~~i~~~~~~~-~~-~V~~~~~~------------~~~~~~i~ad~VIlAtG~~g 225 (481)
.|+++++++.+.+|..++ ++ .+ .|++.... ++...++.+|.||.|+|-.+
T Consensus 270 ~gv~~~~~~~~~~i~~~~-~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p 333 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSP-DGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKS 333 (460)
T ss_dssp EEEEEECSEEEEEEEECT-TSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEEC
T ss_pred ceEEEECCCChheEEcCC-CCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCC
Confidence 789999999999997642 13 22 34443100 12236899999999999544
No 263
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.35 E-value=0.0067 Score=57.69 Aligned_cols=86 Identities=10% Similarity=0.029 Sum_probs=61.7
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
..+|+|||+|+.|+-.|..|++ .| +|+++++... . +.
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~--~g-~v~~v~~~~~-----------------~-----------------~~------ 177 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPD--WG-ETTFFTNGIV-----------------E-----------------PD------ 177 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGG--TS-EEEEECTTTC-----------------C-----------------CC------
T ss_pred CCEEEEEecCccHHHHHHHhhh--cC-cEEEEECCCC-----------------C-----------------CC------
Confidence 3689999999999999999998 56 8888874321 0 00
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
..+.+.+++.||+++. ++|.++..+ + .|.+.+ +
T Consensus 178 ------------------------------------~~~~~~l~~~gv~i~~-~~v~~i~~~---~--~v~~~~-----g 210 (297)
T 3fbs_A 178 ------------------------------------ADQHALLAARGVRVET-TRIREIAGH---A--DVVLAD-----G 210 (297)
T ss_dssp ------------------------------------HHHHHHHHHTTCEEEC-SCEEEEETT---E--EEEETT-----S
T ss_pred ------------------------------------HHHHHHHHHCCcEEEc-ceeeeeecC---C--eEEeCC-----C
Confidence 0012344567999985 899998642 2 566665 5
Q ss_pred EEEEcCeEEEccCCCh
Q 011610 210 ECIEADYLLIASGSSQ 225 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g 225 (481)
.++.+|.||+|+|..+
T Consensus 211 ~~~~~D~vi~a~G~~p 226 (297)
T 3fbs_A 211 RSIALAGLFTQPKLRI 226 (297)
T ss_dssp CEEEESEEEECCEEEC
T ss_pred CEEEEEEEEEccCccc
Confidence 7899999999999543
No 264
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.20 E-value=0.019 Score=59.01 Aligned_cols=59 Identities=14% Similarity=0.085 Sum_probs=37.3
Q ss_pred HHHHHHHHHh------CCCEEEcCceEEEEEecCCCCeEEEEEeec-------------ccCceEEEEcCeEEEccCCCh
Q 011610 165 IDCLLTEAKH------RGVVLQTGKVVTTASSDNAGRKFLLKVEKR-------------TMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 165 ~~~l~~~~~~------~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~-------------~~~~~~~i~ad~VIlAtG~~g 225 (481)
.+.|.+.+.+ .|+++++++.+.++..++ ....|++.+. .++...++.||.||.|+|-.+
T Consensus 249 ~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~--~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 249 IKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKR--KVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp HHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSS--SCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred HHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCC--cEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccccc
Confidence 3445555555 689999999999997542 3222433210 011125799999999999544
No 265
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.97 E-value=0.042 Score=62.33 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=28.1
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
.+|+|||||..|+-+|..+++ .|. +|+|+++.
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~--~G~~~Vtvv~r~ 365 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALR--CGARRVFLVFRK 365 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHH--TTCSEEEEECSS
T ss_pred CcEEEECCChHHHHHHHHHHH--cCCCEEEEEEec
Confidence 489999999999999999998 575 89999854
No 266
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.87 E-value=0.11 Score=49.77 Aligned_cols=32 Identities=31% Similarity=0.528 Sum_probs=29.3
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+|+|||||..|+-+|..|++ .|.+|+|+|+.
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~--~G~~Vt~v~~~ 184 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTK--YGSKVIILHRR 184 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTT--TSSEEEEECSS
T ss_pred CeEEEECCChHHHHHHHHHHH--hCCeeeeeccc
Confidence 589999999999999999999 78999999953
No 267
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.78 E-value=0.0088 Score=63.88 Aligned_cols=64 Identities=13% Similarity=0.105 Sum_probs=48.6
Q ss_pred CeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCC-CCeEEEEEeecccCceEEEEcCeEEEcc
Q 011610 152 GRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNA-GRKFLLKVEKRTMNLVECIEADYLLIAS 221 (481)
Q Consensus 152 g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~-~~~~~V~~~~~~~~~~~~i~ad~VIlAt 221 (481)
+..||.. ....+.++|.+.++..|++|+++++|.+|..+++ +...+|+..+ |+++.||+||...
T Consensus 369 g~~yp~G-G~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~-----Ge~i~A~~VVs~~ 433 (650)
T 1vg0_A 369 PFLFPLY-GQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQF-----GQRIISKHFIIED 433 (650)
T ss_dssp SEEEETT-CTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETT-----SCEEECSEEEEEG
T ss_pred ceEEeCC-chhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCC-----CCEEEcCEEEECh
Confidence 4566654 4678889999999999999999999999987641 2344566544 6789999998743
No 268
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=95.68 E-value=0.005 Score=64.96 Aligned_cols=34 Identities=12% Similarity=0.262 Sum_probs=30.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (481)
..+|+|||+|++|+-+|..|++ .+.+|+++++..
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~--~~~~Vtv~~r~~ 224 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAE--QAEQLFVFQRSA 224 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--HBSEEEEEESSC
T ss_pred CCEEEEECCCchHHHHHHHHHh--hCCEEEEEECCC
Confidence 4689999999999999999998 578999999653
No 269
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.13 E-value=0.053 Score=59.11 Aligned_cols=34 Identities=15% Similarity=0.016 Sum_probs=29.6
Q ss_pred CCeEEEEC--CchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011610 50 EELLVVVG--GGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (481)
Q Consensus 50 ~~DVvIIG--gG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (481)
..+|+||| ||..|+-+|..|++ .|.+|+|+++..
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~--~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLAT--AGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHH--TTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHH--cCCEEEEEeccc
Confidence 35899999 99999999999999 688999999543
No 270
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=95.12 E-value=0.027 Score=57.51 Aligned_cols=33 Identities=18% Similarity=0.126 Sum_probs=28.6
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCc-EEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLN-VVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~-V~llE~~ 84 (481)
..+|+|||+|.+|+-.|..|++ .+.+ |+|+++.
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~--~~~~~V~l~~r~ 245 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTP--VAKHPIYQSLLG 245 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTT--TSCSSEEEECTT
T ss_pred CCEEEEEccCcCHHHHHHHHHH--HhCCcEEEEeCC
Confidence 3579999999999999999998 5777 8888853
No 271
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=94.93 E-value=0.092 Score=59.08 Aligned_cols=94 Identities=20% Similarity=0.221 Sum_probs=65.5
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhcC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (481)
..|+|||+|..|+-+|..|++ .|.+|+|+|+.... . .
T Consensus 285 k~vvViGgG~~g~E~A~~L~~--~G~~Vtvv~~~~~~-------------------~----------------~------ 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAA--TGGVVAVIDARSSI-------------------S----------------A------ 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGG--GTCCSEEEESCSSC-------------------C----------------H------
T ss_pred CeEEEEcCCHHHHHHHHHHHH--cCCcEEEEECCCcc-------------------c----------------h------
Confidence 579999999999999999998 67889999853210 0 0
Q ss_pred ChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEec-CCCCeEEEEEeec-c---
Q 011610 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSD-NAGRKFLLKVEKR-T--- 205 (481)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~-~~~~~~~V~~~~~-~--- 205 (481)
. .+.+++.||+|++++.|.++..+ + +....|++.+. .
T Consensus 322 ---~----------------------------------~~~l~~~GV~v~~~~~v~~i~~~~~-~~v~~v~~~~~~~~~~ 363 (965)
T 2gag_A 322 ---A----------------------------------AAQAVADGVQVISGSVVVDTEADEN-GELSAIVVAELDEARE 363 (965)
T ss_dssp ---H----------------------------------HHHHHHTTCCEEETEEEEEEEECTT-SCEEEEEEEEECTTCC
T ss_pred ---h----------------------------------HHHHHhCCeEEEeCCEeEEEeccCC-CCEEEEEEEeccccCC
Confidence 0 12345679999999999999873 2 24334555420 0
Q ss_pred cCceEEEEcCeEEEccCCCh
Q 011610 206 MNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 206 ~~~~~~i~ad~VIlAtG~~g 225 (481)
.+...++.+|.||+|+|-.+
T Consensus 364 ~G~~~~i~~D~Vv~a~G~~P 383 (965)
T 2gag_A 364 LGGTQRFEADVLAVAGGFNP 383 (965)
T ss_dssp EEEEEEEECSEEEEECCEEE
T ss_pred CCceEEEEcCEEEECCCcCc
Confidence 11136899999999999543
No 272
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.83 E-value=0.041 Score=46.46 Aligned_cols=36 Identities=19% Similarity=0.255 Sum_probs=31.8
Q ss_pred CCCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 47 TSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 47 ~~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...+-.|+|||+|..|...|..|.+ .|++|+++|++
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~--~g~~v~vid~~ 39 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLA--SDIPLVVIETS 39 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHH--TTCCEEEEESC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECC
Confidence 3455689999999999999999998 78999999965
No 273
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=94.25 E-value=0.26 Score=53.02 Aligned_cols=52 Identities=15% Similarity=0.156 Sum_probs=37.7
Q ss_pred HHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCCh
Q 011610 166 DCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQ 225 (481)
Q Consensus 166 ~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g 225 (481)
..+.+.+++.||+++++++|+++.. +.+.++ .+ +...++.+|.||+|+|..+
T Consensus 577 ~~~~~~l~~~GV~v~~~~~v~~i~~----~~v~~~-~~---G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 577 WIHRTTLLSRGVKMIPGVSYQKIDD----DGLHVV-IN---GETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEET----TEEEEE-ET---TEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHHhcCCEEEeCcEEEEEeC----CeEEEe-cC---CeEEEEeCCEEEECCCccc
Confidence 3455677889999999999999862 334443 32 2236799999999999654
No 274
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=94.03 E-value=0.51 Score=48.77 Aligned_cols=34 Identities=15% Similarity=0.158 Sum_probs=28.7
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+|+|||+|.+|.-.|..|++...+.+|.++=|.
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~ 280 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRD 280 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCC
Confidence 4799999999999999999875457889888754
No 275
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.99 E-value=0.064 Score=46.05 Aligned_cols=34 Identities=26% Similarity=0.397 Sum_probs=30.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
....|+|||+|..|...|..|.+ .|.+|+++|++
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~--~g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASS--SGHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCCcEEEECCCHHHHHHHHHHHh--CCCeEEEEECC
Confidence 34689999999999999999998 68999999965
No 276
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.89 E-value=0.061 Score=44.74 Aligned_cols=33 Identities=18% Similarity=0.256 Sum_probs=29.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.++|+|||+|..|...|..|++ .|.+|+++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~--~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE--KGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCeEEEEECC
Confidence 3589999999999999999998 68999999964
No 277
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=93.68 E-value=0.045 Score=52.51 Aligned_cols=42 Identities=21% Similarity=0.210 Sum_probs=31.9
Q ss_pred ccCCCCeEEEEEEeecccCcchHHHHHHHHHHHHHHHHHhHHhhHh
Q 011610 429 SKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSNDA 474 (481)
Q Consensus 429 sk~~~gLy~~GE~ldv~g~~GGynl~~A~~sG~~AG~~aa~~~~~~ 474 (481)
.+.+||+|+|| |+.+. +-.++.+|...|++||.++.++..++
T Consensus 261 ~Ts~p~IyA~G---Dv~~~-~~~~~~~A~~~G~~AA~~i~~~L~~e 302 (304)
T 4fk1_A 261 RTSEKNIYLAG---ETTTQ-GPSSLIIAASQGNKAAIAINSDITDE 302 (304)
T ss_dssp BCSSTTEEECS---HHHHT-SCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEe---ccCCC-cchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 46899999999 55431 11257889999999999998887654
No 278
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.53 E-value=0.08 Score=44.46 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=30.0
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+..|+|+|+|..|...|..|.+ .|++|+++|++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~--~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTA--AGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCeEEEEECC
Confidence 3579999999999999999998 78999999965
No 279
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.20 E-value=0.082 Score=42.46 Aligned_cols=33 Identities=27% Similarity=0.305 Sum_probs=29.4
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCC-CcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPK-LNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g-~~V~llE~~ 84 (481)
...|+|+|+|..|...+..|.+ .| .+|++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~--~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKT--SSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--CSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHh--CCCceEEEEeCC
Confidence 4689999999999999999998 67 899999965
No 280
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.15 E-value=0.15 Score=49.00 Aligned_cols=33 Identities=27% Similarity=0.368 Sum_probs=29.7
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|.|||+|..|...|..+++ .|++|+++|++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~--~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAA--TGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCeEEEEECC
Confidence 3579999999999999999998 78999999965
No 281
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=92.06 E-value=0.73 Score=48.09 Aligned_cols=33 Identities=12% Similarity=0.305 Sum_probs=29.4
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|+|||+|.+|+-.|..+++ .+.+|+++++.
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~--~~~~vtv~~r~ 218 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAK--QAAELFVFQRT 218 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--HBSEEEEEESS
T ss_pred CCEEEEECCCccHHHHHHHHhh--cCceEEEEEcC
Confidence 3689999999999999999998 57899999964
No 282
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=91.98 E-value=0.13 Score=49.25 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=29.2
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+|+|||||..|+-+|..|++ .|.+|+|+|+.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~ 177 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTK--FADKVTIVHRR 177 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--TCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--cCCEEEEEecc
Confidence 489999999999999999998 68999999954
No 283
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=91.80 E-value=0.14 Score=49.78 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=29.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
....|.|||+|..|...|..++. .|++|+|+|.+
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~--~G~~V~l~D~~ 38 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFAS--GGFRVKLYDIE 38 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH--TTCCEEEECSC
T ss_pred CCCeEEEECCcHHHHHHHHHHHh--CCCeEEEEECC
Confidence 34689999999999999999998 79999999954
No 284
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.76 E-value=0.15 Score=49.47 Aligned_cols=34 Identities=18% Similarity=0.292 Sum_probs=30.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (481)
.++|+|||+|..|.+.|..|++ .|.+|++++++.
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~--~g~~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAK--TGHCVSVVSRSD 35 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHH--TTCEEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHh--CCCeEEEEeCCh
Confidence 3689999999999999999999 689999999764
No 285
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.53 E-value=0.17 Score=42.09 Aligned_cols=32 Identities=16% Similarity=0.133 Sum_probs=28.8
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..|+|+|+|..|...|..|.+ .|.+|+++|++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~--~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHR--MGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 469999999999999999998 68899999964
No 286
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.52 E-value=0.22 Score=42.51 Aligned_cols=32 Identities=16% Similarity=0.256 Sum_probs=29.3
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..|+|+|+|..|...|..|.+ .|.+|+++|++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~--~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQ--RGQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHH--TTCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHH--CCCCEEEEECC
Confidence 479999999999999999998 68999999975
No 287
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=91.44 E-value=0.13 Score=51.46 Aligned_cols=32 Identities=19% Similarity=0.066 Sum_probs=29.3
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+|+|||||..|+-+|..|++ .|.+|+|+|+.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~--~g~~Vtvv~~~ 178 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIID--SGTPASIGIIL 178 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHH--HTCCEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHh--CCCeEEEEEcC
Confidence 579999999999999999999 68999999964
No 288
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=91.22 E-value=0.17 Score=52.31 Aligned_cols=61 Identities=15% Similarity=0.094 Sum_probs=47.9
Q ss_pred HHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 170 TEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 170 ~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
+.+++.||++++++.|.++..++ +...|.+.+ +.++.+|.||+|+|-.+.. .+++.+|+++
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~--~v~~v~~~~-----g~~i~aD~Vv~a~G~~p~~-~l~~~~g~~~ 325 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNE--KVERVIDMN-----NHEYKVDALIFADGRRPDI-NPITQAGGKL 325 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSS--SCCEEEETT-----CCEEECSEEEECCCEEECC-HHHHHTTCCE
T ss_pred HHHHhCCcEEEeCCeeEEEecCC--ceEEEEeCC-----CeEEEeCEEEECCCcCcCc-hHHHhcCCCc
Confidence 66778899999999999998653 444566654 5789999999999976652 5788888765
No 289
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.09 E-value=0.2 Score=45.59 Aligned_cols=32 Identities=31% Similarity=0.455 Sum_probs=29.2
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+.|+|||+|..|...|..|.+ .|.+|+++|++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~--~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLS--RKYGVVIINKD 32 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHH--TTCCEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCeEEEEECC
Confidence 369999999999999999998 78999999965
No 290
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.05 E-value=0.22 Score=43.76 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=29.8
Q ss_pred CCeEEEECCchHHHHHHHHHhccCC-CCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAP-KLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~-g~~V~llE~~ 84 (481)
...|+|||+|..|...|..|.+ . |++|+++|++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~--~~g~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA--RYGKISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH--HHCSCEEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHh--ccCCeEEEEECC
Confidence 4579999999999999999998 6 8999999965
No 291
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=90.99 E-value=0.16 Score=49.14 Aligned_cols=34 Identities=21% Similarity=0.321 Sum_probs=29.5
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (481)
.++|.|||+|..|.+.|..|++ .|.+|++++++.
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~--~g~~V~~~~r~~ 35 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQR--SGEDVHFLLRRD 35 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHH--TSCCEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHH--CCCeEEEEEcCc
Confidence 3689999999999999999999 689999999764
No 292
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=90.92 E-value=0.075 Score=48.95 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=31.4
Q ss_pred cccccCCCCeEEEEEEeecccCcchHHHHHHHHHHHHHHHHHhHH
Q 011610 426 TMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKL 470 (481)
Q Consensus 426 t~esk~~~gLy~~GE~ldv~g~~GGynl~~A~~sG~~AG~~aa~~ 470 (481)
+++.+.+||||++|++. +.| ..++|+-+|+.+++++.+.
T Consensus 192 ~~~~t~~p~iya~G~~a-~~g-----~~~~~~~~g~~~a~~i~~~ 230 (232)
T 2cul_A 192 TFRLKRLEGLYAVGLCV-REG-----DYARMSEEGKRLAEHLLHE 230 (232)
T ss_dssp TTEETTSBSEEECGGGT-SCC-----CHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccceeeeecc-cCc-----cHHHHHHHHHHHHHHHHhh
Confidence 45556899999999887 555 6678899999999998654
No 293
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.76 E-value=0.21 Score=48.21 Aligned_cols=33 Identities=27% Similarity=0.381 Sum_probs=29.6
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (481)
.++|+|||+|..|...|..|++ .|. +|+++|++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~--~g~~~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQ--RGIAREIVLEDIA 41 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCC
Confidence 4689999999999999999998 677 89999965
No 294
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=90.39 E-value=0.71 Score=49.20 Aligned_cols=39 Identities=15% Similarity=0.095 Sum_probs=34.5
Q ss_pred CCCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC-CCCC
Q 011610 47 TSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPL 87 (481)
Q Consensus 47 ~~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g 87 (481)
.+++|||+|||+|..|...|..|++ .|.+|++||+ +..|
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~--~g~~vl~id~~~~~g 44 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSR--SGQRVLHVDSRSYYG 44 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSC
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHh--CCCEEEEEcCCCccc
Confidence 3467999999999999999999999 7999999994 4666
No 295
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=90.27 E-value=0.28 Score=47.98 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=29.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
..+|+|||+|..|...|..|++ .|+ +|+|+|.+
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~--~g~~~V~L~D~~ 42 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCAL--RELADVVLYDVV 42 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--HTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEECC
Confidence 4689999999999999999998 566 89999965
No 296
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=90.22 E-value=0.24 Score=49.12 Aligned_cols=33 Identities=12% Similarity=0.176 Sum_probs=30.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+++|||+|+.|+.+|..+++ .|.+|+|+|+.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~--~g~~Vtlv~~~ 177 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSS--GGYQLDVVAPC 177 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCeEEEEecC
Confidence 4689999999999999999999 78999999964
No 297
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.99 E-value=0.19 Score=48.19 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=29.4
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+++|+|||+|..|.+.|..|++ .|.+|++++++
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~--~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQ--SLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH--HCTTCEEEESS
T ss_pred CcEEEEECCCHHHHHHHHHHHH--CCCeEEEEEec
Confidence 4689999999999999999998 57899999976
No 298
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=89.39 E-value=0.29 Score=49.80 Aligned_cols=32 Identities=25% Similarity=0.123 Sum_probs=29.6
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+|+|||||..|+-+|..|++ .|.+|+|+|+.
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~ 199 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVING--LGAKTHLFEMF 199 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHh--cCCEEEEEEeC
Confidence 589999999999999999999 68999999965
No 299
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=89.16 E-value=0.34 Score=46.33 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=29.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+++|.|||+|..|...|..|++ .|++|++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQ--GGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCeEEEECcCHHHHHHHHHHHh--CCCcEEEEECC
Confidence 3589999999999999999998 68899999864
No 300
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=89.00 E-value=0.18 Score=51.09 Aligned_cols=108 Identities=14% Similarity=0.206 Sum_probs=69.1
Q ss_pred CCeEEEECCchHHHHHHHHHhc-cCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHh
Q 011610 50 EELLVVVGGGAAGVYGAIRAKT-VAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~-~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (481)
+.||+|||||++|+++|..|++ ..++.+|+|||+...- ... + .+......
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~-------------~~~---~-------------~~~~~~~g 54 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF-------------QFV---P-------------SNPWVGVG 54 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE-------------ECG---G-------------GHHHHHHT
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC-------------ccc---C-------------CccccccC
Confidence 5799999999999999999987 2247899999965310 000 0 00000000
Q ss_pred cCChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCc
Q 011610 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 208 (481)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 208 (481)
.... .++...+.+.+++.|++++. .+|+.+..++ + .|++++
T Consensus 55 ~~~~-----------------------------~~~~~~l~~~~~~~gv~~~~-~~v~~id~~~--~--~V~~~~----- 95 (437)
T 3sx6_A 55 WKER-----------------------------DDIAFPIRHYVERKGIHFIA-QSAEQIDAEA--Q--NITLAD----- 95 (437)
T ss_dssp SSCH-----------------------------HHHEEECHHHHHTTTCEEEC-SCEEEEETTT--T--EEEETT-----
T ss_pred ccCH-----------------------------HHHHHHHHHHHHHCCCEEEE-eEEEEEEcCC--C--EEEECC-----
Confidence 0011 11111233445678999974 6999997654 3 466665
Q ss_pred eEEEEcCeEEEccCCCh
Q 011610 209 VECIEADYLLIASGSSQ 225 (481)
Q Consensus 209 ~~~i~ad~VIlAtG~~g 225 (481)
+.++.+|+||+|||+.+
T Consensus 96 g~~i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 96 GNTVHYDYLMIATGPKL 112 (437)
T ss_dssp SCEEECSEEEECCCCEE
T ss_pred CCEEECCEEEECCCCCc
Confidence 56799999999999864
No 301
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=88.93 E-value=0.39 Score=45.64 Aligned_cols=32 Identities=19% Similarity=0.206 Sum_probs=29.4
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..|.|||+|..|...|..+++ .|++|+++|++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~--~G~~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAF--HGFAVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCeEEEEeCC
Confidence 589999999999999999998 79999999965
No 302
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=88.87 E-value=0.35 Score=48.50 Aligned_cols=33 Identities=33% Similarity=0.552 Sum_probs=30.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+|+|||||..|+-+|..|++ .|.+|+++|+.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~ 177 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATART--AGVHVSLVETQ 177 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCEEEEEEeC
Confidence 4689999999999999999998 78999999964
No 303
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=88.82 E-value=0.83 Score=45.56 Aligned_cols=62 Identities=13% Similarity=0.082 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcC
Q 011610 161 SSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLG 235 (481)
Q Consensus 161 a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G 235 (481)
...+.+.+.+.+++.||+++++++|++++. +. |.+++ ++++.+|.||+|+|..+. .+++..|
T Consensus 217 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~----~~--v~~~~-----g~~~~~D~vi~a~G~~~~--~~l~~~~ 278 (409)
T 3h8l_A 217 SPNSRKAVASIYNQLGIKLVHNFKIKEIRE----HE--IVDEK-----GNTIPADITILLPPYTGN--PALKNST 278 (409)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEECS----SE--EEETT-----SCEEECSEEEEECCEECC--HHHHTSC
T ss_pred CHHHHHHHHHHHHHCCCEEEcCCceEEECC----Ce--EEECC-----CCEEeeeEEEECCCCCcc--HHHHhcc
Confidence 367788888899999999999999999963 22 56665 678999999999997653 3455553
No 304
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=88.77 E-value=0.42 Score=46.62 Aligned_cols=33 Identities=18% Similarity=0.285 Sum_probs=29.4
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
..+|.|||+|..|...|..+++ .|+ +|+++|.+
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~--~g~~~V~L~Di~ 47 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQ--KDLGDVYMFDII 47 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEECC
Confidence 3689999999999999999998 677 89999964
No 305
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=88.71 E-value=0.33 Score=49.34 Aligned_cols=31 Identities=13% Similarity=0.179 Sum_probs=28.6
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (481)
..|+|||.|.+|+++|..|++ .|++|++.|.
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~--~G~~v~~~D~ 36 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLA--RGVTPRVMDT 36 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHT--TTCCCEEEES
T ss_pred CEEEEEeecHHHHHHHHHHHh--CCCEEEEEEC
Confidence 579999999999999999988 7999999994
No 306
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=88.69 E-value=0.4 Score=46.77 Aligned_cols=32 Identities=25% Similarity=0.455 Sum_probs=29.3
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
++|.|||+|..|...|..|++ .|.+|++++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~--~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLAL--AGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHH--TTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHH--CCCEEEEEECh
Confidence 589999999999999999999 68999999964
No 307
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.51 E-value=0.39 Score=49.02 Aligned_cols=32 Identities=28% Similarity=0.214 Sum_probs=29.8
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
++|.|||+|..|+..|..|++ .|++|+++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~--~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAE--LGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHh--cCCEEEEEECC
Confidence 589999999999999999999 78999999965
No 308
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=88.50 E-value=0.34 Score=45.89 Aligned_cols=33 Identities=12% Similarity=0.411 Sum_probs=29.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (481)
....|+|||||..|...|..|.+ .|++|+|++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~--~Ga~VtViap 44 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMP--TGCKLTLVSP 44 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGG--GTCEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHh--CCCEEEEEcC
Confidence 35789999999999999999999 7899999984
No 309
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.45 E-value=0.42 Score=45.09 Aligned_cols=32 Identities=19% Similarity=0.028 Sum_probs=29.0
Q ss_pred eEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011610 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (481)
Q Consensus 52 DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (481)
+|.|||+|..|...|..|++ .|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCK--QGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHh--CCCCEEEEEcCc
Confidence 69999999999999999998 789999999653
No 310
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=88.43 E-value=0.44 Score=43.72 Aligned_cols=33 Identities=15% Similarity=0.230 Sum_probs=29.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (481)
....|+|||||..|...|..|.+ .|.+|+|++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~--~GA~VtVvap 62 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQ--EGAAITVVAP 62 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGG--GCCCEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCEEEEECC
Confidence 35789999999999999999999 6899999874
No 311
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=88.40 E-value=0.41 Score=46.59 Aligned_cols=38 Identities=21% Similarity=0.225 Sum_probs=30.4
Q ss_pred CCCCCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 45 THTSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 45 ~~~~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+...+..+|.|||+|..|...|..|++ .|.+|+++++.
T Consensus 9 ~~~~~~~kI~iIG~G~mG~ala~~L~~--~G~~V~~~~r~ 46 (335)
T 1z82_A 9 HHHHMEMRFFVLGAGSWGTVFAQMLHE--NGEEVILWARR 46 (335)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred cccccCCcEEEECcCHHHHHHHHHHHh--CCCeEEEEeCC
Confidence 344467899999999999999999998 78999999864
No 312
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=88.35 E-value=0.44 Score=46.28 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=29.5
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|.|||+|..|...|..+++ .|++|+++|++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~--~G~~V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFAS--GGFRVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TTCCEEEECSC
T ss_pred CceEEEEeeCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 4689999999999999999998 79999999965
No 313
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=88.34 E-value=0.68 Score=47.23 Aligned_cols=34 Identities=18% Similarity=0.335 Sum_probs=30.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
....|.|||+|..|...|..+++ .|++|+++|++
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~--aG~~V~l~D~~ 86 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGL--AGIETFLVVRN 86 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred cCCEEEEECCCHHHHHHHHHHHH--CCCeEEEEECc
Confidence 34689999999999999999999 79999999965
No 314
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=88.26 E-value=0.42 Score=46.27 Aligned_cols=33 Identities=24% Similarity=0.350 Sum_probs=29.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
...|.|||+|..|...|..+++ .|+ +|+++|.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~--~g~~~V~l~D~~ 37 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGK--DNLADVVLFDIA 37 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--HTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCceEEEEeCC
Confidence 4689999999999999999998 577 89999965
No 315
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=88.22 E-value=0.39 Score=49.07 Aligned_cols=32 Identities=16% Similarity=0.207 Sum_probs=29.5
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+|+|||||..|+-+|..|++ .|.+|+|+|+.
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~--~G~~Vtlv~~~ 198 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRS--FGSEVTVVALE 198 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--cCCEEEEEEcC
Confidence 589999999999999999998 68999999964
No 316
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.21 E-value=0.27 Score=50.38 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=30.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+.|+|+|+|-.|...|..|.+ .|++|+|+|++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~--~~~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVG--ENNDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCS--TTEEEEEEESC
T ss_pred cCEEEEECCCHHHHHHHHHHHH--CCCCEEEEECC
Confidence 4689999999999999999988 68999999965
No 317
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=88.20 E-value=0.5 Score=46.60 Aligned_cols=33 Identities=15% Similarity=0.173 Sum_probs=30.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.++|.|||+|..|.+.|..|++ .|.+|.+++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~--~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLAR--KGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHT--TTCCEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHH--CCCeEEEEeCC
Confidence 4689999999999999999999 78999999975
No 318
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=88.00 E-value=0.32 Score=42.40 Aligned_cols=47 Identities=17% Similarity=0.145 Sum_probs=33.4
Q ss_pred cccccCCCCeEEEEEEeecccCcchHHHHHHHHHHHHHHHHHhHHhhHhhhh
Q 011610 426 TMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSNDATLK 477 (481)
Q Consensus 426 t~esk~~~gLy~~GE~ldv~g~~GGynl~~A~~sG~~AG~~aa~~~~~~~~~ 477 (481)
.|+. .+||+|++| |+.+.... ..+.|...|+.|+.++........+.
T Consensus 130 ~~~t-~~~~i~a~G---D~~~~~~~-~~~~A~~~g~~aa~~i~~~~~~~~~~ 176 (180)
T 2ywl_A 130 GGRT-SYPRVYAAG---VARGKVPG-HAIISAGDGAYVAVHLVSDLRGEPYK 176 (180)
T ss_dssp TCBC-SSTTEEECG---GGGTCCSC-CHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred CCCc-CCCCEEEee---cccCcchh-hHHHHHHhHHHHHHHHHHHhhhcccc
Confidence 4554 789999999 54433221 66889999999999998766554443
No 319
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=87.69 E-value=0.49 Score=48.69 Aligned_cols=34 Identities=15% Similarity=0.253 Sum_probs=30.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
-.+.|.|||+|..|+..|..|++ .|++|+++|++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~--~G~~V~~~d~~ 40 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLAD--IGHDVFCLDVD 40 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCceEEEECcCHHHHHHHHHHHh--CCCEEEEEECC
Confidence 35799999999999999999999 78999999964
No 320
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=87.65 E-value=0.55 Score=42.41 Aligned_cols=33 Identities=12% Similarity=0.055 Sum_probs=29.4
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|.|||+|..|...|..|++ .|.+|.+++++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~--~g~~V~~~~~~ 51 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEI--AGHEVTYYGSK 51 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TTCEEEEECTT
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCC
Confidence 4689999999999999999998 68999999965
No 321
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=87.31 E-value=0.48 Score=48.85 Aligned_cols=33 Identities=15% Similarity=0.170 Sum_probs=30.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+|+|||||..|+-+|..+++ .|.+|+++|+.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~ 206 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSR--LGVIVKVFGRS 206 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHH--TTCEEEEECCT
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEEC
Confidence 3689999999999999999999 78999999965
No 322
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=87.27 E-value=0.46 Score=48.46 Aligned_cols=33 Identities=15% Similarity=0.084 Sum_probs=30.0
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|.|||.|.+|+++|..|++ .|++|++.|..
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~--~G~~V~~~D~~ 41 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAK--LGAIVTVNDGK 41 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 4689999999999999999999 79999999953
No 323
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=87.22 E-value=0.59 Score=45.10 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=29.0
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
++|+|||+|..|...|..|++...+.+|+++|++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3799999999999999999984237899999965
No 324
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=87.21 E-value=0.53 Score=45.28 Aligned_cols=32 Identities=22% Similarity=0.286 Sum_probs=28.5
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (481)
++|+|||+|..|...|..|+. .|+ +|+++|.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~--~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVL--RGSCSELVLVDRD 34 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCC
Confidence 379999999999999999998 677 89999965
No 325
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=87.12 E-value=0.51 Score=47.29 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=29.5
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|+|||+|++|+.+|..|.. .|.+|+++|+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~--lGa~V~v~D~~ 222 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARR--LGAVVSATDVR 222 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHH--CCCEEEEEcCC
Confidence 4689999999999999999988 68999999954
No 326
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=87.12 E-value=0.65 Score=44.69 Aligned_cols=34 Identities=12% Similarity=0.087 Sum_probs=30.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+++|.|||.|..|...|..|++ .|++|+++|++
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~--~G~~V~~~dr~ 53 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLK--NGFKVTVWNRT 53 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred cCCEEEEECccHHHHHHHHHHHH--CCCeEEEEeCC
Confidence 45789999999999999999999 78999999965
No 327
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=86.81 E-value=0.52 Score=43.97 Aligned_cols=36 Identities=14% Similarity=0.270 Sum_probs=30.9
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCCCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGKPL 87 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~~g 87 (481)
...|+|||+|..|..+|..|++ .|. +++|+|++.+-
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~--~Gv~~i~lvD~d~v~ 67 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLAS--AGVGNLTLLDFDTVS 67 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHH--HTCSEEEEECCCBCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHH--cCCCeEEEEcCCCcc
Confidence 4689999999999999999999 565 89999977543
No 328
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=86.69 E-value=0.35 Score=46.41 Aligned_cols=31 Identities=26% Similarity=0.253 Sum_probs=28.2
Q ss_pred CeEEEECCchHHHHHHHHHhccCC-----C-CcEEEEeC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAP-----K-LNVVIIEK 83 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~-----g-~~V~llE~ 83 (481)
++|.|||+|..|...|..|++ . | .+|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~--~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLAL--RAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--HHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHh--CccccCCCCCEEEEEc
Confidence 589999999999999999998 6 7 89999986
No 329
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=86.63 E-value=0.65 Score=44.80 Aligned_cols=33 Identities=18% Similarity=0.359 Sum_probs=28.6
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
+.+|+|||+|..|...|..++. .|. +|+++|.+
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~--~g~~~v~L~Di~ 35 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAA--KELGDIVLLDIV 35 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCCeEEEEeCC
Confidence 3589999999999999999998 565 89999954
No 330
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=86.57 E-value=0.72 Score=44.79 Aligned_cols=33 Identities=27% Similarity=0.332 Sum_probs=29.0
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
..+|+|||+|..|...|..++. .|+ +|+++|.+
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~--~g~~~v~L~Di~ 37 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQ--KNLGDVVLFDIV 37 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEeCC
Confidence 3589999999999999999998 576 89999954
No 331
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=86.57 E-value=0.36 Score=48.75 Aligned_cols=35 Identities=29% Similarity=0.623 Sum_probs=31.4
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
++||+|||||++|+++|+.|++.+++++|+|||+.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~ 36 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDR 36 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSS
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCC
Confidence 47999999999999999999985458999999975
No 332
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=86.38 E-value=0.79 Score=46.89 Aligned_cols=33 Identities=27% Similarity=0.221 Sum_probs=29.8
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|.|||+|..|...|..+++ .|++|+++|++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~--~G~~V~l~D~~ 69 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR--VGISVVAVESD 69 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHh--CCCeEEEEECC
Confidence 4579999999999999999998 79999999964
No 333
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=86.38 E-value=0.57 Score=46.16 Aligned_cols=31 Identities=26% Similarity=0.202 Sum_probs=28.7
Q ss_pred eEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 52 DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+|.|||+|..|...|..|++ .|++|+++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~--~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSK--KCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTT--TEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHh--CCCEEEEEECC
Confidence 89999999999999999998 68899999965
No 334
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=86.35 E-value=2 Score=45.90 Aligned_cols=62 Identities=13% Similarity=0.054 Sum_probs=43.4
Q ss_pred eeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecc-cCceEEEEcCeEEEccC
Q 011610 154 VFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRT-MNLVECIEADYLLIASG 222 (481)
Q Consensus 154 ~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~-~~~~~~i~ad~VIlAtG 222 (481)
.+...+....+.++|.+ +++|+++++|++|..++ +.+.|++.+.. .+.+.+++||+||+|+.
T Consensus 393 ~~~~~gG~~~l~~~La~-----~l~I~l~~~V~~I~~~~--~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP 455 (662)
T 2z3y_A 393 HLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYTA--SGCEVIAVNTRSTSQTFIYKCDAVLCTLP 455 (662)
T ss_dssp CEEETTCTTHHHHHHTT-----TCEEETTEEEEEEEEET--TEEEEEEEESSCTTCEEEEEESEEEECCC
T ss_pred eeeecCcHHHHHHHHHh-----cCceecCCeEEEEEECC--CcEEEEEeecccCCCCeEEEeCEEEECCC
Confidence 34334455566666543 67999999999999875 66777775311 12246899999999986
No 335
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=86.26 E-value=0.6 Score=46.76 Aligned_cols=33 Identities=39% Similarity=0.573 Sum_probs=29.9
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+|+|||+|..|+-+|..+++ .|.+|+++|+.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~--~g~~Vtvv~~~ 175 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARK--LGLSVTILEAG 175 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCeEEEEecC
Confidence 4689999999999999999999 78999999964
No 336
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=86.22 E-value=0.68 Score=46.99 Aligned_cols=36 Identities=28% Similarity=0.166 Sum_probs=31.6
Q ss_pred CCCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 47 TSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 47 ~~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+.+..|.|||.|-.|+..|..+++ .|++|+.+|-+
T Consensus 18 ~~~m~~IaViGlGYVGLp~A~~~A~--~G~~V~g~Did 53 (444)
T 3vtf_A 18 GSHMASLSVLGLGYVGVVHAVGFAL--LGHRVVGYDVN 53 (444)
T ss_dssp TCCCCEEEEECCSHHHHHHHHHHHH--HTCEEEEECSC
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHh--CCCcEEEEECC
Confidence 3356799999999999999999998 68999999944
No 337
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=86.00 E-value=0.69 Score=45.17 Aligned_cols=32 Identities=19% Similarity=0.098 Sum_probs=29.3
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
++|.|||+|..|...|..|++ .|++|+++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~--~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL--KGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 589999999999999999998 68999999965
No 338
>3r8n_M 30S ribosomal protein S13; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_M* 3j18_M 3oaq_M 3ofa_M 3ofx_M 3ofo_M 3r8o_M 4a2i_M 4gd1_M 4gd2_M 3i1m_M 1vs7_M* 3e1a_F 3e1c_F 1vs5_M 3i1o_M 3i1q_M 3i1s_M 3i1z_M 3i21_M ...
Probab=85.89 E-value=0.72 Score=37.39 Aligned_cols=41 Identities=17% Similarity=0.165 Sum_probs=36.5
Q ss_pred chhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhccCe
Q 011610 358 CLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCT 398 (481)
Q Consensus 358 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~l~~~~ 398 (481)
.+-.+++..+|+.+|+++++.+.+|+++++..|.+.+.+|.
T Consensus 23 GIG~~~A~~I~~~~gid~~~r~~~Lt~~ei~~l~~~i~~~~ 63 (114)
T 3r8n_M 23 GVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFV 63 (114)
T ss_dssp TCCHHHHHHHHHHTTCCTTCCSTTCCHHHHHHHHHHHSSSC
T ss_pred CcCHHHHHHHHHHcCcCcccCcccCCHHHHHHHHHHHHHhc
Confidence 45678899999999999999999999999999999886654
No 339
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=85.85 E-value=0.62 Score=46.29 Aligned_cols=34 Identities=29% Similarity=0.394 Sum_probs=30.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
...+|+|+|||.+|+.+|..+.. .|. +|.++|+.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~--~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLA--AGATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHH--HTCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHH--cCCCeEEEEECC
Confidence 45799999999999999999988 477 99999965
No 340
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.84 E-value=0.66 Score=47.87 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=29.7
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+|+|||||..|+-.|..|++ .|.+|+++|+.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~ 208 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKR--LGIDSYIFARG 208 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHT--TTCEEEEECSS
T ss_pred CCeEEEECChHHHHHHHHHHHH--cCCeEEEEecC
Confidence 3589999999999999999998 68999999964
No 341
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=85.76 E-value=0.41 Score=40.24 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=27.8
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|+|||+|..|...|..|++ .|.+|+++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~--~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSY--PQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCT--TTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCEEEEEcCC
Confidence 4689999999999999998887 67778887753
No 342
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=85.76 E-value=0.65 Score=44.92 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=28.0
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+|.|||+|..|.+.|..|++ .|.+|+++ +.
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~--~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLAR--AGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHH--TTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHH--CCCeEEEE-Ec
Confidence 4689999999999999999999 68899988 43
No 343
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=85.73 E-value=0.39 Score=43.51 Aligned_cols=37 Identities=14% Similarity=0.184 Sum_probs=28.8
Q ss_pred cCCCCeEEEEEEeecccCcchHHHHHHHHHHHHHHHHHhHHhh
Q 011610 430 KIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSN 472 (481)
Q Consensus 430 k~~~gLy~~GE~ldv~g~~GGynl~~A~~sG~~AG~~aa~~~~ 472 (481)
...+|+|+|| |. ++|-.++.|+.||+.|++.++++.+
T Consensus 292 ~~~~~v~l~G---Da---~~g~gv~~A~~sG~~aA~~I~~~L~ 328 (336)
T 3kkj_A 292 DADLGIYVCG---DW---CLSGRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp ETTTTEEECC---GG---GTTSSHHHHHHHHHHHHHHHHHHTT
T ss_pred eCCCCEEEEe---cc---cCCcCHHHHHHHHHHHHHHHHHHhh
Confidence 3569999999 43 2233589999999999999987653
No 344
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=85.68 E-value=0.61 Score=47.89 Aligned_cols=34 Identities=18% Similarity=0.230 Sum_probs=30.6
Q ss_pred CCeEEEECCchHHHHHHHHHhccCC-CC-cEEEEeCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAP-KL-NVVIIEKGK 85 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~-g~-~V~llE~~~ 85 (481)
.++|.|||+|..|+..|..|++ . |+ +|+++|++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~--~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFAD--APCFEKVLGFQRNS 53 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH--STTCCEEEEECCCC
T ss_pred CCEEEEECcCHHHHHHHHHHHH--hCCCCeEEEEECCh
Confidence 4689999999999999999999 6 89 999999653
No 345
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=85.40 E-value=0.81 Score=44.89 Aligned_cols=33 Identities=27% Similarity=0.474 Sum_probs=29.5
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+..|+|||||..|..+|+.+.+ .|++|+++|.+
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~--~G~~vv~vd~~ 33 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKK--AGMKVVLVDKN 33 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 3579999999999999999988 79999999943
No 346
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=85.37 E-value=0.77 Score=46.24 Aligned_cols=33 Identities=12% Similarity=0.222 Sum_probs=30.0
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|+|||.|..|...|..|.+ .|.+|++||++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~--~g~~vvvId~d 36 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLS--SGVKMVVLDHD 36 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCCEEEEECC
Confidence 4579999999999999999998 78999999965
No 347
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=85.34 E-value=0.68 Score=44.24 Aligned_cols=33 Identities=21% Similarity=0.093 Sum_probs=30.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+|.|||.|..|...|..|++ .|++|+++|++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~--~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE--WPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT--STTCEEEECSS
T ss_pred CCeEEEECcCHHHHHHHHHHHH--CCCeEEEEeCC
Confidence 4689999999999999999999 78999999965
No 348
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=85.23 E-value=0.81 Score=43.99 Aligned_cols=32 Identities=19% Similarity=0.401 Sum_probs=28.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.++|+|||+|..|.+.|..|+ . |.+|++++++
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~--g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-L--YHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHh-c--CCceEEEECC
Confidence 468999999999999999998 3 6899999975
No 349
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=85.19 E-value=0.18 Score=48.94 Aligned_cols=43 Identities=26% Similarity=0.266 Sum_probs=30.4
Q ss_pred ccCCCCeEEEEEEee-cccCcc-hHHHHHHHHHHHHHHHHHhHHh
Q 011610 429 SKIHPRLFFAGEVLN-VDGVTG-GFNFQNAWSGGYIAGTSIGKLS 471 (481)
Q Consensus 429 sk~~~gLy~~GE~ld-v~g~~G-Gynl~~A~~sG~~AG~~aa~~~ 471 (481)
.+.+||+|+||+++. ++|... |..+..+..||+.|++.+.++.
T Consensus 280 ~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~l 324 (326)
T 3fpz_A 280 YAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHF 324 (326)
T ss_dssp CTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHh
Confidence 467899999996553 454332 3345567789999999987764
No 350
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=85.11 E-value=0.85 Score=44.27 Aligned_cols=33 Identities=18% Similarity=0.072 Sum_probs=28.5
Q ss_pred CCeEEEECCchHHHH-HHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVY-GAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~-aA~~la~~~~g~~V~llE~~ 84 (481)
...|.|||.|.+|++ +|..|.+ .|++|.+.|+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~--~G~~V~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKE--AGFEVSGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CcEEEEEEECHHHHHHHHHHHHh--CCCEEEEEcCC
Confidence 468999999999996 7778888 79999999954
No 351
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=85.05 E-value=0.84 Score=43.68 Aligned_cols=34 Identities=18% Similarity=0.125 Sum_probs=30.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+..+|.|||.|..|...|..|++ .|++|+++|++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~--~G~~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLR--AGLSTWGADLN 39 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCeEEEEECC
Confidence 34689999999999999999999 78999999965
No 352
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=85.02 E-value=0.65 Score=47.46 Aligned_cols=32 Identities=9% Similarity=-0.033 Sum_probs=29.1
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+|+|||+|.+|+-.|..|++ .+.+|+++++.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~--~g~~V~li~~~ 229 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYK--YGAKKLISCYR 229 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHH--TTCSEEEEECS
T ss_pred CEEEEEcCCCCHHHHHHHHHH--hCCeEEEEEEC
Confidence 579999999999999999999 68899999853
No 353
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=84.96 E-value=0.7 Score=45.87 Aligned_cols=33 Identities=21% Similarity=0.174 Sum_probs=29.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|+|||+|.+|+.+|..|.. .|.+|+++|+.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~--lGa~V~v~D~~ 216 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKR--LGAKTTGYDVR 216 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHH--HTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 4689999999999999999988 58899999954
No 354
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=84.53 E-value=0.79 Score=47.87 Aligned_cols=32 Identities=25% Similarity=0.309 Sum_probs=29.3
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+|+|||||..|+-+|..|++ .|.+|+++++.
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~ 183 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHH--LGIKTTLLELA 183 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHh--cCCcEEEEEcC
Confidence 489999999999999999998 68999999964
No 355
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=84.45 E-value=1 Score=40.83 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=28.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
....|.|||+|..|...|..|++ .|++|.+++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~--~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVG--SGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHH--TTCCEEEEESS
T ss_pred CCCEEEEEccCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 34689999999999999999998 68899999864
No 356
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=84.43 E-value=0.88 Score=46.78 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=30.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+++|.|||.|..|+..|..|++.+.|++|+++|++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 46899999999999999999984337899999954
No 357
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=84.38 E-value=1 Score=41.66 Aligned_cols=34 Identities=21% Similarity=0.123 Sum_probs=30.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
....|.|||+|..|...|..|++ .|++|+++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~--~G~~V~~~~r~ 51 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALAD--LGHEVTIGTRD 51 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 45789999999999999999998 68999999965
No 358
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=84.33 E-value=0.87 Score=44.91 Aligned_cols=32 Identities=28% Similarity=0.353 Sum_probs=28.3
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..|+|+|+|.+|..++..|+. .|.+|+++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~--~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVG--LGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 689999999999999999988 67889888854
No 359
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=84.07 E-value=0.73 Score=46.71 Aligned_cols=31 Identities=16% Similarity=0.129 Sum_probs=28.6
Q ss_pred eEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 52 DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+|.|||+|..|+..|..|++ .|++|+++|++
T Consensus 2 kI~VIG~G~vG~~~A~~la~--~G~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSA--RGHEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHH--TTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHH--CCCEEEEEECC
Confidence 69999999999999999999 78999999964
No 360
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=84.05 E-value=0.83 Score=45.29 Aligned_cols=34 Identities=32% Similarity=0.260 Sum_probs=29.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
....|+|+|+|.+|..+|..|.. .|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~--~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLD--LGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--HTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHh--CCCCeEEEEECC
Confidence 46799999999999999999988 466 79999965
No 361
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=83.89 E-value=0.81 Score=44.02 Aligned_cols=33 Identities=21% Similarity=0.471 Sum_probs=28.7
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (481)
..+|.|||+|..|...|+.++. .++ +|+|+|.+
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~--~g~~~ev~L~Di~ 48 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISA--KGIADRLVLLDLS 48 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--cCCCCEEEEEcCC
Confidence 4689999999999999999988 566 89999954
No 362
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=83.68 E-value=0.68 Score=46.28 Aligned_cols=31 Identities=19% Similarity=0.189 Sum_probs=27.6
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEe
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIE 82 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE 82 (481)
++|.|||+|..|...|..|++. .|.+|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~-~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASR-DGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS-TTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhC-CCCEEEEEe
Confidence 5899999999999999999872 388999999
No 363
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=83.67 E-value=1.5 Score=44.38 Aligned_cols=112 Identities=18% Similarity=0.236 Sum_probs=70.5
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC-CCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
+||+|||||++|++||..|++.+++.+|+|||+.. ++ ..+|.+.. +... .. .
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g-------~~~~~~~~------------~~~~--~~-----~- 55 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG-------YLSGGLSA------------YFNH--TI-----N- 55 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS-------SCCC-------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc-------ccCccchh------------hhcC--CC-----C-
Confidence 69999999999999999999954589999999764 33 01110000 0000 00 0
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
...+ ..+ .+.+.+.+.|++++++++|+++..++ +.+.+... +.+
T Consensus 56 -~~~~------------------~~~-----------~~~~~~~~~gi~~~~~~~V~~id~~~--~~v~v~~~----~~~ 99 (452)
T 3oc4_A 56 -ELHE------------------ARY-----------ITEEELRRQKIQLLLNREVVAMDVEN--QLIAWTRK----EEQ 99 (452)
T ss_dssp ------------------------CC-----------CCHHHHHHTTEEEECSCEEEEEETTT--TEEEEEET----TEE
T ss_pred -CHHH------------------hhc-----------CCHHHHHHCCCEEEECCEEEEEECCC--CEEEEEec----Cce
Confidence 0000 000 01123456799999999999998764 66665421 125
Q ss_pred EEEEcCeEEEccCCCh
Q 011610 210 ECIEADYLLIASGSSQ 225 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g 225 (481)
..+.+|++|+|||+.+
T Consensus 100 ~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 100 QWYSYDKLILATGASQ 115 (452)
T ss_dssp EEEECSEEEECCCCCB
T ss_pred EEEEcCEEEECCCccc
Confidence 7899999999999854
No 364
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=83.67 E-value=0.92 Score=45.47 Aligned_cols=33 Identities=21% Similarity=0.254 Sum_probs=29.0
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|+|||+|.+|+.+|..|.. .|.+|+++|+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~--~Ga~V~v~D~~ 204 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANS--LGAIVRAFDTR 204 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCC
Confidence 4689999999999999999887 68899999954
No 365
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=83.59 E-value=1.1 Score=43.38 Aligned_cols=33 Identities=24% Similarity=0.331 Sum_probs=29.0
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
..+|.|||+|..|.+.|..|+. .++ +|+++|.+
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~--~~~~~v~L~Di~ 40 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGL--KELGDVVLFDIA 40 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEeCC
Confidence 4689999999999999999998 566 99999954
No 366
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=83.50 E-value=0.81 Score=44.30 Aligned_cols=32 Identities=22% Similarity=0.270 Sum_probs=28.2
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (481)
++|.|||+|..|...|..|++ .|+ +|+++|++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~--~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLM--KGFAREMVLIDVD 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCCeEEEEeCC
Confidence 369999999999999999998 577 89999965
No 367
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=83.45 E-value=0.99 Score=45.13 Aligned_cols=33 Identities=30% Similarity=0.375 Sum_probs=29.9
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+|+|||+|..|+-+|..+++ .|.+|+++|+.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~--~g~~Vtvv~~~ 184 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTK--FGVNVTLLEAL 184 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--cCCeEEEEecC
Confidence 4689999999999999999999 78999999954
No 368
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=83.44 E-value=0.81 Score=44.09 Aligned_cols=34 Identities=15% Similarity=0.083 Sum_probs=29.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
.+..|.|||.|..|...|..|++ .|+ +|+++++.
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~--~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQ--AGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH--HSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHH--CCCCeEEEEcCC
Confidence 35789999999999999999998 688 99999974
No 369
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=83.37 E-value=0.76 Score=47.18 Aligned_cols=32 Identities=25% Similarity=0.264 Sum_probs=29.2
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+|+|||||..|+-.|..+++ .|.+|+++|+.
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~ 230 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWAR--LGAKVTVVEFL 230 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--HTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCEEEEEecc
Confidence 579999999999999999998 68999999954
No 370
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=83.32 E-value=0.99 Score=45.00 Aligned_cols=32 Identities=31% Similarity=0.429 Sum_probs=29.2
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+|+|||+|..|+-+|..+++ .|.+|+++|+.
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtvv~~~ 174 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARA--KGLEVDVVELA 174 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 579999999999999999998 68999999954
No 371
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=83.27 E-value=1.1 Score=45.44 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=30.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
-...+.|||.|..|+..|..|++ .|++|+++|++
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~--~G~~V~~~D~~ 40 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSD--FGHEVVCVDKD 40 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CceEEEEEcCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 35789999999999999999999 79999999965
No 372
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=83.22 E-value=0.81 Score=44.18 Aligned_cols=30 Identities=20% Similarity=0.247 Sum_probs=27.8
Q ss_pred eEEEECCchHHHHHHHHHhccCCCCcEEEEeC
Q 011610 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (481)
Q Consensus 52 DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (481)
.|.|||+|..|...|..|++ .|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~--~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVD--NGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHH--HCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHh--CCCeEEEEEc
Confidence 69999999999999999998 6889999997
No 373
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=83.22 E-value=0.98 Score=43.64 Aligned_cols=34 Identities=15% Similarity=0.188 Sum_probs=30.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...+|.|||.|..|...|..|++ .|++|++++++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~--~G~~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCE--AGYALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHh--CCCeEEEEcCC
Confidence 45689999999999999999998 78999999965
No 374
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=83.17 E-value=1.1 Score=42.35 Aligned_cols=32 Identities=19% Similarity=0.155 Sum_probs=29.4
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+.|.|||.|..|...|..|++ .|++|++++++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~--~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVK--AGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHH--CCCeEEEEcCC
Confidence 479999999999999999998 78999999965
No 375
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=83.14 E-value=1 Score=43.43 Aligned_cols=34 Identities=12% Similarity=-0.029 Sum_probs=30.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCC-CcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPK-LNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g-~~V~llE~~ 84 (481)
+...|.|||.|..|...|..|++ .| ++|+++++.
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~--~G~~~V~~~dr~ 57 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGG--RNAARLAAYDLR 57 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT--TTCSEEEEECGG
T ss_pred cCCeEEEECccHHHHHHHHHHHH--cCCCeEEEEeCC
Confidence 34689999999999999999999 78 999999965
No 376
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=83.06 E-value=0.88 Score=43.74 Aligned_cols=32 Identities=19% Similarity=0.181 Sum_probs=28.3
Q ss_pred CeEEEECCchHHHHHHHHHhccCCC--CcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPK--LNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g--~~V~llE~~ 84 (481)
++|+|||+|..|...|..|++ .| .+|+++|++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~--~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIA--QGVADDYVFIDAN 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEcCC
Confidence 479999999999999999998 46 689999965
No 377
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=82.99 E-value=1 Score=43.60 Aligned_cols=33 Identities=18% Similarity=0.327 Sum_probs=28.8
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (481)
..+|+|||+|..|...|+.++. .+. +|+++|.+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~--~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMAL--RQTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH--TTCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCC
Confidence 4689999999999999999998 455 89999944
No 378
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=82.89 E-value=1.2 Score=46.09 Aligned_cols=36 Identities=11% Similarity=0.079 Sum_probs=31.2
Q ss_pred CCCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 47 TSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 47 ~~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+...|.|||.|..|...|..|++ .|++|+++++.
T Consensus 7 ~~~~~~IgvIGlG~MG~~lA~~La~--~G~~V~v~dr~ 42 (497)
T 2p4q_A 7 HHMSADFGLIGLAVMGQNLILNAAD--HGFTVCAYNRT 42 (497)
T ss_dssp --CCCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred ccCCCCEEEEeeHHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 3466799999999999999999999 78999999965
No 379
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=82.82 E-value=1.5 Score=42.10 Aligned_cols=33 Identities=12% Similarity=0.052 Sum_probs=29.5
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|.|||+|..|...|..|++ .|.+|++++++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~--~g~~V~~~~~~ 62 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLK--MGHTVTVWNRT 62 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred CCeEEEEcccHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 3689999999999999999998 68899999965
No 380
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=82.70 E-value=0.97 Score=43.09 Aligned_cols=33 Identities=12% Similarity=0.075 Sum_probs=30.0
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+..|.|||.|..|...|..|++ .|++|++++++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~--~G~~V~~~d~~ 35 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLK--AGYLLNVFDLV 35 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCEEEEEeecHHHHHHHHHHHh--CCCeEEEEcCC
Confidence 4689999999999999999998 78999999965
No 381
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=82.66 E-value=1.1 Score=44.66 Aligned_cols=33 Identities=24% Similarity=0.248 Sum_probs=28.9
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|+|||+|.+|+.+|..|.. .|.+|+++|+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~--~Ga~V~~~d~~ 204 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKR--LGAVVMATDVR 204 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 4689999999999999999887 68889999854
No 382
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=82.64 E-value=0.89 Score=47.52 Aligned_cols=34 Identities=12% Similarity=0.039 Sum_probs=30.0
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKP 86 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~ 86 (481)
.+++|||||..|+-.|..+++ -|.+|+|++++..
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~--lG~~VTii~~~~~ 257 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNS--LGYDVTVAVRSIV 257 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--HTCCEEEEESSCS
T ss_pred ceEEEECCCHHHHHHHHHHHh--cCCeEEEeccccc
Confidence 579999999999999999999 6899999987543
No 383
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=82.47 E-value=0.83 Score=41.51 Aligned_cols=33 Identities=24% Similarity=0.381 Sum_probs=28.5
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEE-EeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVI-IEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~l-lE~~ 84 (481)
+++|.|||+|..|...|..|++ .|++|++ ++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~--~g~~V~~v~~r~ 56 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTA--AQIPAIIANSRG 56 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHH--TTCCEEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCEEEEEECCC
Confidence 4689999999999999999998 6888888 6654
No 384
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=82.32 E-value=1.4 Score=39.36 Aligned_cols=31 Identities=23% Similarity=0.258 Sum_probs=27.9
Q ss_pred eEEEEC-CchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 52 LLVVVG-GGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 52 DVvIIG-gG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+|+||| +|..|...|..|++ .|++|.+++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~--~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT--LGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT--TTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 689999 99999999999998 68899999864
No 385
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=82.28 E-value=1.5 Score=41.38 Aligned_cols=33 Identities=15% Similarity=0.267 Sum_probs=29.4
Q ss_pred CCeEEEECC-chHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGG-GAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGg-G~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+..|.|||+ |..|...|..|++ .|++|+++++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~--~g~~V~~~~r~ 44 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHD--SAHHLAAIEIA 44 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH--SSSEEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHh--CCCEEEEEECC
Confidence 468999999 9999999999998 68899999864
No 386
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=82.21 E-value=1.3 Score=45.62 Aligned_cols=33 Identities=21% Similarity=0.251 Sum_probs=29.8
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|.|||+|..|...|..+++ .|++|+++|++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~--aG~~V~l~D~~ 37 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAAS--HGHQVLLYDIS 37 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH--TTCCEEEECSC
T ss_pred CCEEEEECcCHHHHHHHHHHHH--CCCeEEEEECC
Confidence 3579999999999999999998 79999999965
No 387
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=82.19 E-value=1 Score=42.74 Aligned_cols=33 Identities=12% Similarity=0.119 Sum_probs=29.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+++|.|||+|..|...|..|++ .|++|.+++++
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~~~ 37 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLK--AGYSLVVSDRN 37 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHH--TTCEEEEECSC
T ss_pred cceEEEECchHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 3589999999999999999998 68899999965
No 388
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=82.01 E-value=1.7 Score=41.68 Aligned_cols=34 Identities=26% Similarity=0.149 Sum_probs=30.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...+|.|||.|..|...|..|++ .|++|++++++
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~--~G~~V~~~dr~ 41 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLK--QGKRVAIWNRS 41 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 34689999999999999999998 78999999965
No 389
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=81.98 E-value=1 Score=43.11 Aligned_cols=32 Identities=19% Similarity=0.229 Sum_probs=27.8
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (481)
++|.|||+|..|.+.|+.|++ .+. +|+++|.+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~--~~~~~~v~L~D~~ 34 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLL--NLDVDEIALVDIA 34 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HSCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCCeEEEEECC
Confidence 379999999999999999998 455 89999954
No 390
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=81.93 E-value=1.3 Score=42.83 Aligned_cols=33 Identities=24% Similarity=0.411 Sum_probs=29.4
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
..+|.|||+|..|...|+.+++ .|+ +|+++|.+
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~--~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQ--KELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEecc
Confidence 3589999999999999999998 677 99999965
No 391
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=81.84 E-value=1.9 Score=41.09 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=29.9
Q ss_pred CCCeEEEEC-CchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVG-GGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIG-gG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+...|.||| +|..|.+.|..|++ .|++|.+++++
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~--~G~~V~~~~~~ 54 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRA--SGYPISILDRE 54 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHT--TTCCEEEECTT
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHh--CCCeEEEEECC
Confidence 345899999 99999999999998 68999999864
No 392
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=81.78 E-value=1.4 Score=44.64 Aligned_cols=33 Identities=15% Similarity=0.205 Sum_probs=29.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..++|.|||.|..|+..|..|++ |++|+++|++
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~---G~~V~~~D~~ 67 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ---NHEVVALDIV 67 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT---TSEEEEECSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHc---CCeEEEEecC
Confidence 44689999999999999999986 7899999965
No 393
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=81.55 E-value=1.4 Score=43.63 Aligned_cols=33 Identities=27% Similarity=0.389 Sum_probs=29.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|+|+|+|..|..+|..|+. .|.+|+++|+.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~--~Ga~V~~~d~~ 198 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALG--MGAQVTILDVN 198 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCEEEEEECC
Confidence 3689999999999999999988 68899999854
No 394
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=81.31 E-value=1.6 Score=42.33 Aligned_cols=33 Identities=27% Similarity=0.341 Sum_probs=28.7
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
..+|.|||+|..|.+.|..++. .++ +|.++|.+
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~--~~~~~v~l~Di~ 38 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALI--KQLGDVVLFDIA 38 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCceEEEEeCC
Confidence 3689999999999999999998 566 89999954
No 395
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=81.24 E-value=1.7 Score=41.84 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=30.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (481)
+...|.|||.|..|.+.|..|++ .|+ +|+++|++
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~--~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRR--SGFKGKIYGYDIN 67 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHH--TTCCSEEEEECSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHh--CCCCCEEEEEECC
Confidence 34689999999999999999998 677 89999965
No 396
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=81.20 E-value=0.97 Score=42.81 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=29.1
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+|.|||.|..|...|..|++ .|++|++++++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~--~G~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVR--AGFDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHH--HTCCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHH--CCCeEEEEcCC
Confidence 479999999999999999998 68999999965
No 397
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=81.16 E-value=1 Score=46.06 Aligned_cols=35 Identities=14% Similarity=0.318 Sum_probs=30.0
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+++|.|||.|..|+..|..|++.++|++|+++|++
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 36899999999999999999984337999999964
No 398
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=81.15 E-value=1.4 Score=45.03 Aligned_cols=33 Identities=21% Similarity=0.152 Sum_probs=29.7
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (481)
.+++|||||..|+-.|..+++ .|.+|+++++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKG--LGYEPTVMVRSI 220 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHH--cCCEEEEEeCCC
Confidence 579999999999999999999 689999999643
No 399
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=81.05 E-value=1.6 Score=41.09 Aligned_cols=32 Identities=16% Similarity=0.180 Sum_probs=27.4
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (481)
...++|+|+|.+|..+|..|++ .|.+|+++++
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~--~G~~V~v~~R 150 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLS--LDCAVTITNR 150 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEECS
T ss_pred CCEEEEECCcHHHHHHHHHHHH--cCCEEEEEEC
Confidence 4589999999999999999998 5778877764
No 400
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=80.85 E-value=1.5 Score=41.09 Aligned_cols=31 Identities=19% Similarity=0.114 Sum_probs=28.0
Q ss_pred eEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 52 DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.|.|||+|..|...|..|++ .|++|.+++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRR--RGHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHH--CCCEEEEEECC
Confidence 68999999999999999998 68899999865
No 401
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=80.81 E-value=1.6 Score=42.35 Aligned_cols=34 Identities=29% Similarity=0.359 Sum_probs=29.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (481)
...+|.|||+|..|...|+.++. .++ +|+++|.+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~--~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLM--KDLADEVALVDVM 55 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHH--HCCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCCeEEEEECC
Confidence 34689999999999999999998 465 89999953
No 402
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=80.65 E-value=1.4 Score=42.72 Aligned_cols=33 Identities=18% Similarity=0.315 Sum_probs=28.5
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (481)
..+|.|||+|..|.+.|+.|+. .+. +|+++|.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~--~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALIN--QGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCceEEEEecc
Confidence 4689999999999999999998 455 89999954
No 403
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=80.53 E-value=1.9 Score=41.55 Aligned_cols=36 Identities=19% Similarity=0.267 Sum_probs=28.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...+|+|||+|..|.+.|+.++..+...+|+++|.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 346899999999999999999873222379999954
No 404
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=80.39 E-value=1.8 Score=46.81 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=30.0
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|.|||+|..|...|..+++ .|++|+++|++
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~--aG~~V~l~D~~ 344 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALIL--SNYPVILKEVN 344 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT--TTCCEEEECSS
T ss_pred CcEEEEEcCCHhhHHHHHHHHh--CCCEEEEEECC
Confidence 4579999999999999999999 79999999965
No 405
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=80.36 E-value=1.8 Score=39.91 Aligned_cols=33 Identities=9% Similarity=0.175 Sum_probs=28.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC----cEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL----NVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~----~V~llE~~ 84 (481)
+..|.|||+|..|...|..|++ .|+ +|.+++++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~--~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMIN--KNIVSSNQIICSDLN 38 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH--TTSSCGGGEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHh--CCCCCCCeEEEEeCC
Confidence 3579999999999999999998 676 88888754
No 406
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=80.30 E-value=1.5 Score=40.85 Aligned_cols=35 Identities=14% Similarity=0.331 Sum_probs=30.0
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGKP 86 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~~ 86 (481)
...|+|||+|..|..+|..|++ .|. +++|+|.+.+
T Consensus 28 ~~~VlvvG~GglG~~va~~La~--~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAG--AGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHH--TTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHH--cCCCeEEEEeCCCc
Confidence 4699999999999999999999 565 7889997654
No 407
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=80.24 E-value=1.4 Score=45.64 Aligned_cols=32 Identities=22% Similarity=0.238 Sum_probs=29.6
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+++|||||..|+-.|..+++ .|.+|+++|+.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~--~G~~Vtlv~~~ 246 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNA--TGRRTVMLVRT 246 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCeEEEEEec
Confidence 689999999999999999998 78999999964
No 408
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=80.18 E-value=0.99 Score=44.62 Aligned_cols=32 Identities=13% Similarity=0.019 Sum_probs=28.7
Q ss_pred CeEEEECCchHHHHHHHHHhccCCC-------CcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPK-------LNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g-------~~V~llE~~ 84 (481)
..|.|||+|..|...|..|++ .| .+|+++++.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~--~G~~~~~~~~~V~~~~r~ 60 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGT--NAKNNYLFENEVRMWIRD 60 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHH--HHHHCTTBCSCEEEECCS
T ss_pred CEEEEECcCHHHHHHHHHHHH--cCCccCCCCCeEEEEECC
Confidence 479999999999999999998 57 899999965
No 409
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=80.00 E-value=1.7 Score=40.54 Aligned_cols=35 Identities=9% Similarity=0.033 Sum_probs=30.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (481)
+++.|+|.|+|..|...+..|.+ .|++|+++.+..
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~--~g~~V~~~~r~~ 38 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAP--QGWRIIGTSRNP 38 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGG--GTCEEEEEESCG
T ss_pred CcCcEEEECCcHHHHHHHHHHHH--CCCEEEEEEcCh
Confidence 45789999999999999999998 689999999653
No 410
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=79.96 E-value=1.8 Score=40.71 Aligned_cols=32 Identities=16% Similarity=0.140 Sum_probs=28.2
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (481)
..|.|||+|..|...|..|++ .|+ +|+++|++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~--~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR--SGFKGKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH--TTCCSEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHh--cCCCcEEEEEeCC
Confidence 479999999999999999998 577 89999965
No 411
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=79.88 E-value=1.7 Score=43.15 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=28.9
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|+|||+|..|..+|..++. .|.+|+++|+.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~--~Ga~V~~~d~~ 200 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANG--MGATVTVLDIN 200 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 4689999999999999999988 68899998854
No 412
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=79.87 E-value=1.4 Score=42.60 Aligned_cols=32 Identities=22% Similarity=0.325 Sum_probs=27.5
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (481)
++|.|||+|..|.+.|+.+++ .+. +|+++|.+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~--~~~~~el~l~D~~ 34 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVAR--QDVAKEVVMVDIK 34 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCSSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCc
Confidence 479999999999999999998 455 89999954
No 413
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=79.86 E-value=2.9 Score=41.99 Aligned_cols=68 Identities=9% Similarity=0.077 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCCCc
Q 011610 162 SSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 238 (481)
Q Consensus 162 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~~i 238 (481)
....+.+.+.+++.||++++++.|++++. +...+.. .++.+.++.+|.||+|+|..+. .+....|..+
T Consensus 200 ~~~~~~l~~~l~~~GV~~~~~~~v~~v~~----~~~~~~~---~~g~~~~i~~d~vi~~~G~~~~--~~~~~~~~~l 267 (430)
T 3hyw_A 200 GASKRLVEDLFAERNIDWIANVAVKAIEP----DKVIYED---LNGNTHEVPAKFTMFMPSFQGP--EVVASAGDKV 267 (430)
T ss_dssp TTHHHHHHHHHHHTTCEEECSCEEEEECS----SEEEEEC---TTSCEEEEECSEEEEECEEECC--HHHHTTCTTT
T ss_pred HHHHHHHHHHHHhCCeEEEeCceEEEEeC----CceEEEe---eCCCceEeecceEEEeccCCCc--hHHHhccccc
Confidence 34456677788899999999999999853 3333332 2233568999999999996542 4555555443
No 414
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=79.48 E-value=1.4 Score=40.83 Aligned_cols=31 Identities=19% Similarity=0.238 Sum_probs=27.7
Q ss_pred eEEEECCchHHHHHHHHHhccCCC-CcEEEEeCC
Q 011610 52 LLVVVGGGAAGVYGAIRAKTVAPK-LNVVIIEKG 84 (481)
Q Consensus 52 DVvIIGgG~aGl~aA~~la~~~~g-~~V~llE~~ 84 (481)
.|.|||+|..|...|..|++ .| .+|.++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~--~g~~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVK--QGGYRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHH--HCSCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHH--CCCCeEEEECCC
Confidence 68999999999999999988 57 899999864
No 415
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=79.18 E-value=1.8 Score=42.53 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=30.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.++|.|||.|..|...|..|++ .|++|+++++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~--~G~~V~v~dr~ 54 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRK--GGHECVVYDLN 54 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCEEEEECchHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 3689999999999999999999 78999999965
No 416
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=79.15 E-value=1.9 Score=39.90 Aligned_cols=33 Identities=12% Similarity=0.069 Sum_probs=28.7
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
++.|.|||+|..|...|..|++ .|.+|.+++++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~--~g~~v~~~~~~ 35 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQ--TPHELIISGSS 35 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT--SSCEEEEECSS
T ss_pred ccEEEEECCCHHHHHHHHHHHh--CCCeEEEECCC
Confidence 3689999999999999999988 57889998864
No 417
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=79.09 E-value=1.5 Score=41.53 Aligned_cols=33 Identities=21% Similarity=0.110 Sum_probs=29.4
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+|.|||+|..|...|..|++ .|++|++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~~~ 36 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLK--EGVTVYAFDLM 36 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHH--CCCeEEEEeCC
Confidence 3689999999999999999998 68899999964
No 418
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=78.95 E-value=1.9 Score=41.12 Aligned_cols=38 Identities=16% Similarity=0.130 Sum_probs=30.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPL 87 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g 87 (481)
....|+|||+|..|..+|..|++.+- -+++|+|.+.+-
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGV-G~i~lvD~D~Ve 72 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGI-GKLLLFDYDKVE 72 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCCBC-
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCC-CEEEEECCCccC
Confidence 35799999999999999999999432 378999977553
No 419
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=78.95 E-value=2.1 Score=40.90 Aligned_cols=32 Identities=9% Similarity=0.159 Sum_probs=27.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEK 83 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~ 83 (481)
...|+|||+|.+|..+|..|++ .|. +|+|+.|
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~--~G~~~V~v~nR 173 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLS--TAAERIDMANR 173 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT--TTCSEEEEECS
T ss_pred CCEEEEECcHHHHHHHHHHHHH--CCCCEEEEEeC
Confidence 4689999999999999999998 576 7777764
No 420
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=78.95 E-value=2.1 Score=41.70 Aligned_cols=35 Identities=14% Similarity=0.359 Sum_probs=30.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGKP 86 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~~ 86 (481)
...|+|||+|..|..+|..|++ .|. +++|+|.+.+
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~--aGVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIA--WGVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--cCCCEEEEecCCEe
Confidence 5799999999999999999999 554 6889997654
No 421
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=78.89 E-value=1.9 Score=41.88 Aligned_cols=34 Identities=26% Similarity=0.381 Sum_probs=29.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (481)
...+|.|||+|..|.+.|+.++. .+. +++|+|.+
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~--~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILM--KDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCceEEEEeCC
Confidence 35799999999999999999998 455 79999954
No 422
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=78.80 E-value=1.6 Score=42.29 Aligned_cols=36 Identities=19% Similarity=0.197 Sum_probs=28.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+..+|+|||+|..|.+.|+.|+.....-.+.|+|.+
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 457999999999999999999883222379999953
No 423
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=78.74 E-value=1.2 Score=45.67 Aligned_cols=37 Identities=30% Similarity=0.467 Sum_probs=30.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC-CCCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLS 88 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~ 88 (481)
+++|||||||++||+||+.|++ .|++|+|+|+ +.+|+
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~--~G~~V~VlEa~~~~GG 38 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQA--AGIPVLLLEQRDKPGG 38 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHH--TTCCEEEECCC-----
T ss_pred CCCEEEECCcHHHHHHHHHHHH--CCCcEEEEccCCCCCC
Confidence 4789999999999999999999 7999999995 57774
No 424
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=78.27 E-value=2.1 Score=40.35 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=29.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...++|||+|-+|.++|..|++ .|.+|+|+.|.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~--~G~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKK--QGLQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 5689999999999999999999 57889999865
No 425
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=77.85 E-value=1.7 Score=41.99 Aligned_cols=36 Identities=25% Similarity=0.288 Sum_probs=28.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+..+|+|||+|..|.+.|+.|+..+..-.+.|+|.+
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 347999999999999999999983222379999953
No 426
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=77.78 E-value=1.9 Score=44.21 Aligned_cols=33 Identities=21% Similarity=0.271 Sum_probs=30.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+.+|.|||.|..|...|..|++ .|++|+++++.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~--~G~~V~v~~r~ 47 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIES--RGYTVSIFNRS 47 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHT--TTCCEEEECSS
T ss_pred CCeEEEEccHHHHHHHHHHHHh--CCCeEEEEeCC
Confidence 4689999999999999999998 78999999965
No 427
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=77.66 E-value=1.9 Score=41.38 Aligned_cols=32 Identities=19% Similarity=0.275 Sum_probs=27.9
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+|+|||+|.+|+-+|..|++ .+ +|+++.+.
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~--~~-~v~~v~~~ 194 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVST--VA-ETTWITQH 194 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTT--TS-EEEEECSS
T ss_pred CCEEEEECCCcCHHHHHHHHHh--hC-CEEEEECC
Confidence 3689999999999999999998 45 69999854
No 428
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=77.61 E-value=4.5 Score=41.23 Aligned_cols=38 Identities=18% Similarity=0.093 Sum_probs=31.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCC---cEEEEeCCCCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL---NVVIIEKGKPL 87 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~---~V~llE~~~~g 87 (481)
.+.+|+|||+|..|-.+|..++++ .+. +|+++|+...+
T Consensus 12 ~~~rVlIIGaGgVG~~va~lla~~-~dv~~~~I~vaD~~~~~ 52 (480)
T 2ph5_A 12 FKNRFVILGFGCVGQALMPLIFEK-FDIKPSQVTIIAAEGTK 52 (480)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHH-BCCCGGGEEEEESSCCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-CCCceeEEEEeccchhh
Confidence 456899999999999999999985 455 79999965544
No 429
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=77.53 E-value=2 Score=42.98 Aligned_cols=30 Identities=20% Similarity=0.257 Sum_probs=27.3
Q ss_pred eEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 52 DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+|.|||+|..|+..|..|++ |++|+++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~---G~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL---QNEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT---TSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC---CCEEEEEECC
Confidence 69999999999999999997 5899999964
No 430
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=77.49 E-value=1.9 Score=40.82 Aligned_cols=31 Identities=16% Similarity=0.045 Sum_probs=28.1
Q ss_pred eEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 52 DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+|.|||+|..|...|..|++ .|++|.+++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~--~g~~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMK--HGYPLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHH--TTCCEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 68999999999999999998 68899999964
No 431
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=77.30 E-value=1.8 Score=44.12 Aligned_cols=33 Identities=15% Similarity=0.131 Sum_probs=30.0
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|+|||||.+|...|..|.+ .|.+|+|++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~--~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLE--AGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CcCEEEEEcCC
Confidence 4689999999999999999999 79999999954
No 432
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=77.28 E-value=2.5 Score=41.24 Aligned_cols=34 Identities=12% Similarity=0.056 Sum_probs=30.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
....|.|||.|..|.+.|..|++ .|.+|.++|++
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~--~G~~V~~~dr~ 40 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHA--ANHSVFGYNRS 40 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHH--TTCCEEEECSC
T ss_pred CCCEEEEEeecHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 34579999999999999999998 68999999965
No 433
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=77.28 E-value=2 Score=43.91 Aligned_cols=33 Identities=27% Similarity=0.396 Sum_probs=29.7
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+++|||+|..|+-.|..+++ .|.+|+++++.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~--~g~~Vtli~~~ 223 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHG--LGVKTTLLHRG 223 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHH--cCCeEEEEECC
Confidence 3589999999999999999998 68999999964
No 434
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=77.11 E-value=2.9 Score=42.50 Aligned_cols=123 Identities=20% Similarity=0.218 Sum_probs=64.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCCCCCceEEecCCceeeccCCCcchhHHhhccCCCChhchhhHHhc
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (481)
++||+|||||++|++||+.|++..++.+|+|||+..... ..+|.+.. +... .+ ..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~------~~~~gl~~------------~~~g--~~-----~~ 57 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS------YGGCGIPY------------YVSG--EV-----SN 57 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc------ccccccch------------hhcC--CC-----Cc
Confidence 479999999999999999999854589999999763220 01111100 0000 00 00
Q ss_pred CChHHHHHHHHhcCCcceeecCCeeeecCCChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCce
Q 011610 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 209 (481)
..+ ++|. ...+...+....++.|++++++++|+++..+. +.+.+... .++..
T Consensus 58 --~~~-------------------~~~~---~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~--~~v~~~~~--~~g~~ 109 (472)
T 3iwa_A 58 --IES-------------------LQAT---PYNVVRDPEFFRINKDVEALVETRAHAIDRAA--HTVEIENL--RTGER 109 (472)
T ss_dssp -----------------------------------------------CEEECSEEEEEEETTT--TEEEEEET--TTCCE
T ss_pred --hHH-------------------hccc---cchhccCHHHHhhhcCcEEEECCEEEEEECCC--CEEEEeec--CCCCE
Confidence 000 0000 00011122222335689999999999998764 55655541 11223
Q ss_pred EEEEcCeEEEccCCCh
Q 011610 210 ECIEADYLLIASGSSQ 225 (481)
Q Consensus 210 ~~i~ad~VIlAtG~~g 225 (481)
..+.+|++|+|||+.+
T Consensus 110 ~~~~~d~lviAtG~~p 125 (472)
T 3iwa_A 110 RTLKYDKLVLALGSKA 125 (472)
T ss_dssp EEEECSEEEECCCEEE
T ss_pred EEEECCEEEEeCCCCc
Confidence 5799999999999754
No 435
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=76.96 E-value=1.9 Score=40.64 Aligned_cols=33 Identities=15% Similarity=0.285 Sum_probs=27.9
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...++|+|+|.+|..+|..|++ .|.+|+|+.|.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~--~G~~v~v~~R~ 151 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQ--AQQNIVLANRT 151 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHH--TTCEEEEEESS
T ss_pred CCEEEEECCcHHHHHHHHHHHH--CCCEEEEEECC
Confidence 4689999999999999999998 56788887753
No 436
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=76.96 E-value=1.3 Score=40.53 Aligned_cols=33 Identities=12% Similarity=0.170 Sum_probs=28.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
....|+|+|+|..|...|..|.+ .|. |+++|++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~--~g~-v~vid~~ 40 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRG--SEV-FVLAEDE 40 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTT--SEE-EEEESCG
T ss_pred CCCEEEEECCChHHHHHHHHHHh--CCe-EEEEECC
Confidence 34689999999999999999988 688 9999965
No 437
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=76.79 E-value=3.5 Score=44.70 Aligned_cols=34 Identities=26% Similarity=0.218 Sum_probs=30.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
....|.|||+|..|...|..++. .|++|+++|.+
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~--aG~~V~l~D~~ 348 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFAR--VGISVVAVESD 348 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT--TTCEEEEECSS
T ss_pred cccEEEEEcccHHHHHHHHHHHh--CCCchhcccch
Confidence 35699999999999999999998 79999999954
No 438
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=76.79 E-value=2.3 Score=41.02 Aligned_cols=34 Identities=9% Similarity=0.006 Sum_probs=29.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCC----CcEEEEeCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPK----LNVVIIEKGK 85 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g----~~V~llE~~~ 85 (481)
.++|.|||+|..|...|..|++ .| .+|+++++..
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~--~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTA--AGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHH--TTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCCCcceEEEECCCc
Confidence 3579999999999999999998 67 7899998653
No 439
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=76.75 E-value=2.1 Score=43.40 Aligned_cols=33 Identities=24% Similarity=0.290 Sum_probs=29.8
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+++|||+|..|+-.|..+++ .|.+|+++++.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~--~g~~Vt~v~~~ 202 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHG--LGVKTTLIYRG 202 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEcC
Confidence 4589999999999999999998 68999999964
No 440
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=76.69 E-value=1.9 Score=41.55 Aligned_cols=35 Identities=26% Similarity=0.295 Sum_probs=28.1
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+|+|||+|..|...|+.|+..+....|.++|.+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 36999999999999999999983212479999954
No 441
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=76.59 E-value=1.2 Score=43.42 Aligned_cols=32 Identities=19% Similarity=0.071 Sum_probs=28.6
Q ss_pred CeEEEECCchHHHHHHHHHhccCCC-------CcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPK-------LNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g-------~~V~llE~~ 84 (481)
+.|.|||+|..|...|..|++ .| .+|.+++++
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~--~g~~~~~~~~~V~~~~r~ 47 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGG--NAAQLAQFDPRVTMWVFE 47 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--HHHHCTTEEEEEEEECCC
T ss_pred CeEEEECCCHHHHHHHHHHHh--cCCcccCCCCeEEEEEcC
Confidence 489999999999999999998 56 789999965
No 442
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=76.54 E-value=2 Score=41.68 Aligned_cols=34 Identities=21% Similarity=0.278 Sum_probs=28.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (481)
...+|+|||+|..|.+.|+.|+. .+. ++.|+|.+
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~--~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVL--QGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCCeEEEEeCC
Confidence 34689999999999999999998 455 89999953
No 443
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=76.50 E-value=2.7 Score=38.06 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=29.9
Q ss_pred CCCeEEEECC-chHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGG-GAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGg-G~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+.+.|+|.|| |-.|...|..|++ .|++|+++.|+
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~--~G~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKN--KGHEPVAMVRN 54 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCCeEEEECCCChHHHHHHHHHHh--CCCeEEEEECC
Confidence 3468999998 9999999999999 78999999975
No 444
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=76.27 E-value=2.6 Score=40.17 Aligned_cols=33 Identities=27% Similarity=0.277 Sum_probs=28.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+..|.|||+|..|...|..++ . |++|+++|+.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-a--G~~V~v~d~~ 43 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-S--KHEVVLQDVS 43 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSC
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-c--CCEEEEEECC
Confidence 4579999999999999999888 4 7999999965
No 445
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=76.21 E-value=2 Score=39.77 Aligned_cols=32 Identities=19% Similarity=0.050 Sum_probs=28.2
Q ss_pred CeEEEECCchHHHHHHHHHhccCCC----CcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPK----LNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g----~~V~llE~~ 84 (481)
+.|.|||+|..|...|..|++ .| .+|.++++.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~--~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIAN--ANIIKKENLFYYGPS 40 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHH--HTSSCGGGEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHH--CCCCCCCeEEEEeCC
Confidence 579999999999999999988 56 689999964
No 446
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=76.19 E-value=2.4 Score=45.87 Aligned_cols=33 Identities=15% Similarity=0.170 Sum_probs=29.9
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|.|||+|..|...|..+++ .|++|+++|++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~--aG~~V~l~D~~ 346 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSAS--KGTPILMKDIN 346 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred CCEEEEECCChhhHHHHHHHHh--CCCEEEEEECC
Confidence 4579999999999999999999 79999999965
No 447
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=76.14 E-value=2.4 Score=43.52 Aligned_cols=33 Identities=9% Similarity=0.133 Sum_probs=30.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+.+|.|||.|..|...|..|++ .|++|+++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~--~G~~V~v~dr~ 36 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMND--HGFVVCAFNRT 36 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred CCEEEEEChhHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 4689999999999999999999 78999999965
No 448
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=76.09 E-value=2.1 Score=43.88 Aligned_cols=32 Identities=22% Similarity=0.250 Sum_probs=29.1
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
++|.|||+|..|...|..|++ .|++|.++++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~--~G~~V~v~dr~ 33 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAE--KGFKVAVFNRT 33 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 379999999999999999998 78999999965
No 449
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=75.97 E-value=2.7 Score=39.60 Aligned_cols=34 Identities=21% Similarity=0.286 Sum_probs=28.9
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..|.|||+|..|...|..|++.+.+.+|.++|++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 5899999999999999999884336789999864
No 450
>3u5c_S 40S ribosomal protein S18-A, 40S ribosomal protein S17-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_M 3o30_L 3o2z_L 3u5g_S 1s1h_M 3jyv_M* 2zkq_m
Probab=75.89 E-value=2.6 Score=35.63 Aligned_cols=39 Identities=8% Similarity=0.200 Sum_probs=35.4
Q ss_pred chhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhcc
Q 011610 358 CLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKH 396 (481)
Q Consensus 358 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~l~~ 396 (481)
.+-.+++..+|+.++|++++++.+|+++++.+|...+.+
T Consensus 37 GIG~~~A~~I~~~~gid~~~r~g~Lt~~ei~~l~~~i~~ 75 (146)
T 3u5c_S 37 GVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQN 75 (146)
T ss_dssp TCCHHHHHHHHHHHTCCTTSCSSSCCHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHcCCCCCceeccCCHHHHHHHHHHHHh
Confidence 466889999999999999999999999999999988864
No 451
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=75.84 E-value=2.7 Score=44.11 Aligned_cols=35 Identities=14% Similarity=0.359 Sum_probs=30.0
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGKP 86 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~~ 86 (481)
...|+|||+|..|..+|..|++ .|. +++|+|.+.+
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~--aGVG~ItLvD~D~V 362 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIA--WGVRKITFVDNGTV 362 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT--TTCCEEEEECCSBC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCcc
Confidence 4689999999999999999999 554 7899997654
No 452
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=75.81 E-value=3 Score=39.38 Aligned_cols=33 Identities=9% Similarity=0.223 Sum_probs=28.7
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC---cEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL---NVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~---~V~llE~~ 84 (481)
...|.|||+|..|.+.|..+++ .|+ +|.++|++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~--~g~~~~~V~v~dr~ 38 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIA--NGYDPNRICVTNRS 38 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHH--TTCCGGGEEEECSS
T ss_pred CCEEEEEcccHHHHHHHHHHHH--CCCCCCeEEEEeCC
Confidence 3579999999999999999998 577 89999864
No 453
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=75.65 E-value=1.5 Score=45.24 Aligned_cols=36 Identities=25% Similarity=0.284 Sum_probs=31.8
Q ss_pred CCCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 47 TSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 47 ~~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+.+.+|||||||++|+.+|..|++ .+++|+|||+.
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~--~~~~VtLId~~ 74 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDT--KKYNVSIISPR 74 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCT--TTCEEEEEESS
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhh--CCCcEEEECCC
Confidence 4456789999999999999999988 68999999964
No 454
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=75.63 E-value=2.4 Score=43.54 Aligned_cols=32 Identities=9% Similarity=0.120 Sum_probs=29.2
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
++|.|||.|..|...|..|++ .|++|.++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~--~G~~V~v~dr~ 34 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMND--HGFVVCAFNRT 34 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred CeEEEEChHHHHHHHHHHHHH--CCCeEEEEeCC
Confidence 479999999999999999998 78999999964
No 455
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=75.61 E-value=2.7 Score=41.10 Aligned_cols=35 Identities=29% Similarity=0.300 Sum_probs=28.1
Q ss_pred CCeEEEECC-chHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGG-GAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGg-G~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+|+|||+ |..|..+|+.++.++...+|+++|.+
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 468999998 99999999999883222489999954
No 456
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=75.34 E-value=1.4 Score=41.64 Aligned_cols=31 Identities=19% Similarity=0.123 Sum_probs=27.7
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEe
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIE 82 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE 82 (481)
++.|.|||+|..|...|..|++ .|++|++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLAR--AGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHH--TTCEEEECC
T ss_pred CCEEEEEccCHHHHHHHHHHHh--CCCEEEEEc
Confidence 3589999999999999999998 689999998
No 457
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=75.02 E-value=2.9 Score=38.94 Aligned_cols=31 Identities=19% Similarity=0.255 Sum_probs=27.8
Q ss_pred eEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 52 LLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 52 DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
.++|||+|-+|.+++..|++ .|. +|.|++|.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~--~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQ--MGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHH--TTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHH--cCCCEEEEEeCC
Confidence 89999999999999999998 676 89999864
No 458
>3j20_O 30S ribosomal protein S13P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=75.00 E-value=3.2 Score=35.20 Aligned_cols=39 Identities=13% Similarity=0.109 Sum_probs=35.0
Q ss_pred chhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhcc
Q 011610 358 CLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKH 396 (481)
Q Consensus 358 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~l~~ 396 (481)
.+-.+++..+|+.++|++++++.+|+++++.+|...+.+
T Consensus 30 GIG~~~A~~I~~~~gid~~~r~g~Lt~~ei~~i~~~i~~ 68 (148)
T 3j20_O 30 GIGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILAD 68 (148)
T ss_dssp TCCHHHHHHHHHHHTCCSSSCTTBCCHHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHhCCCCCceeccCCHHHHHHHHHHHhc
Confidence 455788999999999999999999999999999988755
No 459
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=74.96 E-value=1.2 Score=45.96 Aligned_cols=38 Identities=24% Similarity=0.422 Sum_probs=32.6
Q ss_pred CCCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011610 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (481)
Q Consensus 48 ~~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (481)
+..+||+|||||++|++||..|++...+.+|+|||+..
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~ 46 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDP 46 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 35689999999999999999988754589999999753
No 460
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=74.84 E-value=2.9 Score=40.97 Aligned_cols=36 Identities=17% Similarity=0.345 Sum_probs=30.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCCCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGKPL 87 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~~g 87 (481)
...|+|||+|..|..+|..|++ .|. +++|+|.+.+-
T Consensus 118 ~~~VlvvG~GglGs~va~~La~--aGvg~i~lvD~D~Ve 154 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILAT--SGIGEIILIDNDQIE 154 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--HTCSEEEEEECCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCCeEEEECCCcCc
Confidence 4689999999999999999999 454 78999976543
No 461
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=74.71 E-value=2.6 Score=39.80 Aligned_cols=33 Identities=12% Similarity=0.168 Sum_probs=28.5
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
...++|||+|.+|.++|..|++ .|. +|+|+.|.
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~--~G~~~v~v~~R~ 150 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYK--IVRPTLTVANRT 150 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHT--TCCSCCEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHH--CCCCEEEEEeCC
Confidence 4689999999999999999998 677 78888754
No 462
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=74.58 E-value=3.2 Score=39.39 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=27.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
....++|+|+|-+|.++|..|++ .|. +|+|+.|.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~--~G~~~v~i~~R~ 160 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVT--HGVQKLQVADLD 160 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHH--CCCCEEEEEECC
Confidence 34689999999999999999998 576 57777653
No 463
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=74.51 E-value=2.6 Score=40.56 Aligned_cols=33 Identities=15% Similarity=0.242 Sum_probs=28.1
Q ss_pred CeEEEECC-chHHHHHHHHHhccCCC--CcEEEEeCCC
Q 011610 51 ELLVVVGG-GAAGVYGAIRAKTVAPK--LNVVIIEKGK 85 (481)
Q Consensus 51 ~DVvIIGg-G~aGl~aA~~la~~~~g--~~V~llE~~~ 85 (481)
++|+|||+ |..|...|..|++ .+ .+|.++|.+.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~--~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKN--SPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHT--CTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHh--CCCCcEEEEEeCCc
Confidence 37999998 9999999999998 45 5799999654
No 464
>3iz6_M 40S ribosomal protein S18 (S13P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=74.46 E-value=3.1 Score=35.43 Aligned_cols=39 Identities=8% Similarity=0.160 Sum_probs=35.5
Q ss_pred chhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhcc
Q 011610 358 CLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKH 396 (481)
Q Consensus 358 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~l~~ 396 (481)
.+-.+++..+|+.++|++++++.+|+++|+.+|...+.+
T Consensus 35 GIG~~~A~~I~~~~gid~~~r~g~Lt~~ei~~l~~~i~~ 73 (152)
T 3iz6_M 35 GVGRRFSNIVCKKADIDMNKRAGELSAEEMDRLMAVVHN 73 (152)
T ss_dssp TCCHHHHHHHHHHHTCCSSSBTTTSCHHHHHHHHHHHHS
T ss_pred CcCHHHHHHHHHHcCCCCCcEeCcCCHHHHHHHHHHHHh
Confidence 466888999999999999999999999999999988864
No 465
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=74.36 E-value=0.99 Score=41.57 Aligned_cols=33 Identities=12% Similarity=0.105 Sum_probs=29.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (481)
..++|.|||.|..|.+.|..|++ .|++|+++++
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~--~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDS--VGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHH--TTCEEEECSS
T ss_pred CCcEEEEEeeCHHHHHHHHHHHH--CCCEEEEecC
Confidence 34689999999999999999999 7899999886
No 466
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=74.20 E-value=0.83 Score=45.32 Aligned_cols=58 Identities=9% Similarity=0.090 Sum_probs=44.1
Q ss_pred HHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCCChhHHHHHHHcCC
Q 011610 170 TEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGH 236 (481)
Q Consensus 170 ~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~g~g~~la~~~G~ 236 (481)
..+++.|++++.++++..++.+. +...|.+.+ ++++.+|.|++|+|-.+. .+++..|+
T Consensus 210 ~~l~~~gi~v~~~~~v~~v~~~~--~~~~v~~~~-----g~~i~~D~vi~~~g~~~~--~~~~~~gl 267 (401)
T 3vrd_B 210 FGTENALIEWHPGPDAAVVKTDT--EAMTVETSF-----GETFKAAVINLIPPQRAG--KIAQSASL 267 (401)
T ss_dssp TTSTTCSEEEECTTTTCEEEEET--TTTEEEETT-----SCEEECSEEEECCCEEEC--HHHHHTTC
T ss_pred HHHHhcCcEEEeCceEEEEEecc--cceEEEcCC-----CcEEEeeEEEEecCcCCc--hhHhhccc
Confidence 34467899999999999888764 445677776 678999999999996553 46666665
No 467
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=74.18 E-value=2.9 Score=42.80 Aligned_cols=33 Identities=27% Similarity=0.281 Sum_probs=29.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|+|+|+|..|..+|..|+. .|.+|++.|++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa--~GA~Viv~D~~ 297 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQ--AGARVIVTEID 297 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCC
Confidence 4679999999999999999998 78999998854
No 468
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=74.17 E-value=3 Score=39.69 Aligned_cols=33 Identities=21% Similarity=0.162 Sum_probs=28.9
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|.|||+|..|..+|..|.. .|.+|+++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~--~G~~V~~~d~~ 189 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAA--LGANVKVGARS 189 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCEEEEEcccHHHHHHHHHHHH--CCCEEEEEECC
Confidence 4689999999999999999988 68899988853
No 469
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=74.16 E-value=3.3 Score=39.96 Aligned_cols=34 Identities=18% Similarity=0.296 Sum_probs=28.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
....++|+|+|-+|.++|..|++ .|. +|+|+.|.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~--~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAAL--DGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHH--TTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHH--CCCCEEEEEECC
Confidence 34689999999999999999998 677 78887754
No 470
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=74.06 E-value=2.5 Score=39.20 Aligned_cols=30 Identities=20% Similarity=0.137 Sum_probs=26.6
Q ss_pred eEEEECCchHHHHHHHHHhccCCCCcEEEEeC
Q 011610 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (481)
Q Consensus 52 DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (481)
.|.|||+|..|...|..|++ .|++|++.++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~--~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRS--RGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHH--TTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHH--CCCeEEEeCC
Confidence 68999999999999999998 6888888765
No 471
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=74.05 E-value=2.6 Score=41.21 Aligned_cols=35 Identities=11% Similarity=0.130 Sum_probs=30.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGKP 86 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~~ 86 (481)
...|+|||+|..|..+|..|++ .|. +++|+|.+.+
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~--~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLIL--AGVKGLTMLDHEQV 71 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--HTCSEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCCEEEEEECCCc
Confidence 4699999999999999999999 565 7999996644
No 472
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=74.02 E-value=3.4 Score=39.23 Aligned_cols=33 Identities=18% Similarity=0.139 Sum_probs=29.2
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|.|||.|..|..+|..|.. .|.+|+++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~--~G~~V~~~dr~ 187 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAA--LGAKVKVGARE 187 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHh--CCCEEEEEECC
Confidence 4689999999999999999988 68899999854
No 473
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=74.00 E-value=3.2 Score=39.28 Aligned_cols=31 Identities=23% Similarity=0.409 Sum_probs=26.7
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (481)
...++|+|+|..|..+|..|++ .| +|+++++
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~--~G-~V~v~~r 158 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAK--DN-NIIIANR 158 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTS--SS-EEEEECS
T ss_pred CCEEEEECchHHHHHHHHHHHH--CC-CEEEEEC
Confidence 3579999999999999999998 67 8888764
No 474
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=73.99 E-value=2.4 Score=39.87 Aligned_cols=33 Identities=18% Similarity=0.225 Sum_probs=27.3
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|+|||+|.+|.+.|..|++ .|.+|+++++.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~--~g~~V~v~~r~ 161 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVK--EGAKVFLWNRT 161 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHH--HTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHH--cCCEEEEEECC
Confidence 4689999999999999999998 46677777643
No 475
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=73.72 E-value=2.9 Score=39.92 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=26.9
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (481)
++|.|||+|-.|.++|+.|+.+..--+++|+|.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di 33 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 479999999999999999887422236999994
No 476
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=73.66 E-value=2.1 Score=40.84 Aligned_cols=34 Identities=18% Similarity=0.143 Sum_probs=28.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+..+|-+||-|..|...|..|.+ .|++|+++|+.
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~--~G~~V~v~dr~ 37 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLE--AGYELVVWNRT 37 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHH--TTCEEEEC---
T ss_pred CCCcEEEEecHHHHHHHHHHHHH--CCCeEEEEeCC
Confidence 34579999999999999999999 79999999954
No 477
>2xzm_M RPS18E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_M
Probab=73.48 E-value=3.6 Score=35.12 Aligned_cols=39 Identities=13% Similarity=0.101 Sum_probs=35.2
Q ss_pred chhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhcc
Q 011610 358 CLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKH 396 (481)
Q Consensus 358 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~l~~ 396 (481)
.+-.+++..+|+.+|+++++++.+|+++++..|...+.+
T Consensus 37 GIG~~~A~~I~~~~gid~~~r~~~Lt~~ei~~l~~~i~~ 75 (155)
T 2xzm_M 37 GIGRRFAYIICKVLKIDPNARAGLLTEDQCNKITDLIAD 75 (155)
T ss_dssp TCCHHHHHHHHHHTTCCSSSCSSCSCHHHHHHHHHHHHS
T ss_pred ccCHHHHHHHHHHcCCCcccccccCCHHHHHHHHHHHhC
Confidence 466888999999999999999999999999999887765
No 478
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=73.38 E-value=2.6 Score=40.53 Aligned_cols=31 Identities=16% Similarity=0.448 Sum_probs=26.6
Q ss_pred eEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 52 LLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 52 DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
+|.|||+|..|...|+.++. .++ .|.|+|.+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~--~~l~el~L~Di~ 32 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMM--RGYDDLLLIART 32 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHH--HTCSCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHh--CCCCEEEEEcCC
Confidence 48999999999999999987 455 59999954
No 479
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=73.27 E-value=2.7 Score=39.08 Aligned_cols=32 Identities=16% Similarity=0.195 Sum_probs=27.6
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCc-EEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLN-VVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~-V~llE~~ 84 (481)
+.|.|||+|..|...|..+++ .|++ |.+++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~--~g~~~v~~~~~~ 43 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYR--KGFRIVQVYSRT 43 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--HTCCEEEEECSS
T ss_pred CeEEEEcCCHHHHHHHHHHHH--CCCeEEEEEeCC
Confidence 589999999999999999988 5788 7888854
No 480
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=73.18 E-value=4.3 Score=36.23 Aligned_cols=32 Identities=6% Similarity=0.217 Sum_probs=28.0
Q ss_pred CeEEEECC-chHHHHHHHHHh-ccCCCCcEEEEeCC
Q 011610 51 ELLVVVGG-GAAGVYGAIRAK-TVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGg-G~aGl~aA~~la-~~~~g~~V~llE~~ 84 (481)
..|+|.|| |-.|...|..|+ + .|++|+++.++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~--~g~~V~~~~r~ 39 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY--TDMHITLYGRQ 39 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH--CCCEEEEEESS
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc--CCceEEEEecC
Confidence 34999996 999999999999 7 78999999975
No 481
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=73.18 E-value=3.4 Score=43.40 Aligned_cols=36 Identities=14% Similarity=0.330 Sum_probs=30.4
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCCCCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGKPL 87 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~~g 87 (481)
...|+|||+|..|+.+|..|++ .|. +++|+|.+.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~--aGVG~ItLvD~D~Ve 362 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIA--WGVRKITFVDNGTVS 362 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECCCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCCEEEEEcCCCCc
Confidence 4689999999999999999999 454 78999977543
No 482
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=73.05 E-value=3.7 Score=36.57 Aligned_cols=31 Identities=23% Similarity=0.328 Sum_probs=28.3
Q ss_pred eEEEECC-chHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 52 LLVVVGG-GAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 52 DVvIIGg-G~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.|+|.|| |..|...+..|++ .|++|.++.|+
T Consensus 2 kilVtGatG~iG~~l~~~L~~--~g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARR--RGHEVLAVVRD 33 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred EEEEEcCCCHHHHHHHHHHHH--CCCEEEEEEec
Confidence 5999998 9999999999998 68999999975
No 483
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=72.84 E-value=2.6 Score=42.62 Aligned_cols=33 Identities=24% Similarity=0.259 Sum_probs=29.6
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..+..|||.|..|+..|..|++ .|++|+++|++
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~--~G~~V~~~D~~ 43 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAK--HGVDVLGVDIN 43 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCccEEEeeCHHHHHHHHHHHH--CCCEEEEEECC
Confidence 3588999999999999999999 79999999965
No 484
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=72.77 E-value=3.8 Score=36.30 Aligned_cols=31 Identities=26% Similarity=0.279 Sum_probs=28.1
Q ss_pred eEEEECC-chHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 52 LLVVVGG-GAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 52 DVvIIGg-G~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.|+|+|| |..|...+..|++ .|++|+++.|.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~--~g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN--RGHEVTAIVRN 33 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred eEEEEcCCchhHHHHHHHHHh--CCCEEEEEEcC
Confidence 6999996 9999999999998 78999999975
No 485
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=72.56 E-value=3.9 Score=36.55 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=29.5
Q ss_pred CCeEEEECC-chHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGG-GAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGg-G~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
++.|+|.|| |..|...+..|.+ .|.+|.++.+.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~--~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALN--RGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHT--TTCEEEEECSC
T ss_pred CCEEEEEcCCchHHHHHHHHHHH--CCCEEEEEEcC
Confidence 468999996 9999999999998 68999999975
No 486
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=72.40 E-value=4.2 Score=38.46 Aligned_cols=33 Identities=9% Similarity=0.173 Sum_probs=27.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEK 83 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~ 83 (481)
....++|+|+|-+|..+|..|++ .|. +|+|+.|
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~--~G~~~v~v~~R 158 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLD--QQPASITVTNR 158 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT--TCCSEEEEEES
T ss_pred cCCEEEEECchHHHHHHHHHHHh--cCCCeEEEEEC
Confidence 34689999999999999999998 674 7777764
No 487
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=72.34 E-value=5.7 Score=39.09 Aligned_cols=33 Identities=24% Similarity=0.405 Sum_probs=29.7
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|+|||+|..|.+.|..+.+ .|++|+++|..
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~--lG~~viv~d~~ 44 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQK--MGYKVVVLDPS 44 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEECC
Confidence 4689999999999999999999 79999999943
No 488
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=72.28 E-value=6.9 Score=43.12 Aligned_cols=57 Identities=12% Similarity=0.039 Sum_probs=40.4
Q ss_pred CChHHHHHHHHHHHHhCCCEEEcCceEEEEEecCCCCeEEEEEeecc-cCceEEEEcCeEEEccC
Q 011610 159 DSSSSVIDCLLTEAKHRGVVLQTGKVVTTASSDNAGRKFLLKVEKRT-MNLVECIEADYLLIASG 222 (481)
Q Consensus 159 ~~a~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~V~~~~~~-~~~~~~i~ad~VIlAtG 222 (481)
.....+.++|.+ ++.|+++++|+.|..++ +.+.|++.+.. .+.+.+++||+||+|+-
T Consensus 569 gG~~~L~~aLa~-----~l~I~Lnt~V~~I~~~~--~gV~V~~~~~~~~~~g~~i~AD~VIvTvP 626 (852)
T 2xag_A 569 NGYSCVPVALAE-----GLDIKLNTAVRQVRYTA--SGCEVIAVNTRSTSQTFIYKCDAVLCTLP 626 (852)
T ss_dssp TCTTHHHHHHTT-----TCCEECSEEEEEEEEET--TEEEEEEEESSSTTCEEEEEESEEEECCC
T ss_pred CcHHHHHHHHHh-----CCCEEeCCeEEEEEEcC--CcEEEEEeecccCCCCeEEECCEEEECCC
Confidence 444556665543 56899999999999875 66777765311 12246899999999985
No 489
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=72.12 E-value=3.8 Score=40.32 Aligned_cols=33 Identities=15% Similarity=0.091 Sum_probs=28.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCCcEEEEeC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (481)
....|+|+|.|..|..+|..|.+ .|.+|++.|.
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~--~GakVvv~D~ 204 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNT--EGAKLVVTDV 204 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECS
T ss_pred CcCEEEEECchHHHHHHHHHHHH--CCCEEEEEcC
Confidence 45689999999999999999999 6889888773
No 490
>2vqe_M 30S ribosomal protein S13, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: a.156.1.1 PDB: 1gix_P* 1hnw_M* 1hnx_M* 1hnz_M* 1hr0_M 1ibk_M* 1ibl_M* 1ibm_M 1j5e_M 1jgo_P* 1jgp_P* 1jgq_P* 1mj1_P* 1ml5_P* 1n32_M* 1n33_M* 1n34_M 1n36_M 1xmo_M* 1xmq_M* ...
Probab=72.09 E-value=2.2 Score=35.15 Aligned_cols=39 Identities=13% Similarity=0.178 Sum_probs=34.5
Q ss_pred chhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhcc
Q 011610 358 CLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKH 396 (481)
Q Consensus 358 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~l~~ 396 (481)
.+-.+++..+|+.+|+++++.+.+|+++++..|...+.+
T Consensus 24 GIG~~~A~~I~~~~gi~~~~r~~~Lt~~ei~~l~~~i~~ 62 (126)
T 2vqe_M 24 GIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVEN 62 (126)
T ss_dssp SCCSHHHHHHTTTTTCCTTSBGGGCCHHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHcCCCcccccCcCCHHHHHHHHHHHHH
Confidence 455678899999999999999999999999999988764
No 491
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=72.05 E-value=4.4 Score=41.39 Aligned_cols=60 Identities=13% Similarity=0.182 Sum_probs=44.3
Q ss_pred eeeecCCChHHHHHHHHHHHHhCCCEEEcC--ceEEEEEecCCCCeEEEEEeecccCceEEEEcCeEEEccCC
Q 011610 153 RVFPVSDSSSSVIDCLLTEAKHRGVVLQTG--KVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS 223 (481)
Q Consensus 153 ~~~p~~~~a~~~~~~l~~~~~~~Gv~i~~~--~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~ 223 (481)
..||..+....+.+.|.+.+.+. +|+++ ++|++|..++ +.+ ++.+ +.++.||+||+|+..
T Consensus 207 f~yp~~gG~~~l~~~la~~l~~~--~i~~~~~~~V~~I~~~~--~~v--~~~~-----G~~~~ad~VI~a~p~ 268 (484)
T 4dsg_A 207 FRFPQRGGTGIIYQAIKEKLPSE--KLTFNSGFQAIAIDADA--KTI--TFSN-----GEVVSYDYLISTVPF 268 (484)
T ss_dssp EEEESSSCTHHHHHHHHHHSCGG--GEEECGGGCEEEEETTT--TEE--EETT-----SCEEECSEEEECSCH
T ss_pred EEeecCCCHHHHHHHHHhhhhhC--eEEECCCceeEEEEecC--CEE--EECC-----CCEEECCEEEECCCH
Confidence 45677677888888888766442 78889 5699998765 444 4444 567999999999864
No 492
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=71.87 E-value=1.3 Score=38.93 Aligned_cols=39 Identities=15% Similarity=0.252 Sum_probs=30.6
Q ss_pred ccCCCCeEEEEEEeecccCcchHHHHHHHHHHHHHHHHHhHHh
Q 011610 429 SKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLS 471 (481)
Q Consensus 429 sk~~~gLy~~GE~ldv~g~~GGynl~~A~~sG~~AG~~aa~~~ 471 (481)
.+++.+||||||-.. . ..|| ++.|+.||..|++.+.+..
T Consensus 114 ~~p~grl~FAGe~ts-~--~~g~-~eGAl~SG~raA~~i~~~l 152 (181)
T 2e1m_C 114 VRPEGPVYFAGEHVS-L--KHAW-IEGAVETAVRAAIAVNEAP 152 (181)
T ss_dssp HSCBTTEEECSGGGT-T--STTS-HHHHHHHHHHHHHHHHTCC
T ss_pred hCCCCcEEEEEHHHc-C--CccC-HHHHHHHHHHHHHHHHHHh
Confidence 456789999998665 2 4554 9999999999999887654
No 493
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=71.78 E-value=4.1 Score=38.32 Aligned_cols=34 Identities=15% Similarity=0.199 Sum_probs=27.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
....++|+|+|-+|.++|..|++ .|. +|+|+.|.
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~--~G~~~v~i~~R~ 153 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQ--AGPSELVIANRD 153 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHH--TCCSEEEEECSC
T ss_pred cCCEEEEECccHHHHHHHHHHHH--cCCCEEEEEeCC
Confidence 35689999999999999999998 674 77777653
No 494
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=71.66 E-value=3.4 Score=43.14 Aligned_cols=32 Identities=22% Similarity=0.455 Sum_probs=29.9
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
..++|||+|..|...|..|.+ .|.+|+++|++
T Consensus 349 ~~viIiG~G~~G~~la~~L~~--~g~~v~vid~d 380 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDR--KPVPFILIDRQ 380 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTCCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH--CCCCEEEEECC
Confidence 689999999999999999998 78999999965
No 495
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=71.61 E-value=4.3 Score=37.84 Aligned_cols=32 Identities=19% Similarity=0.252 Sum_probs=29.3
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
+.|+|.|+|..|...+..|.+ .|++|+++.+.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~--~g~~V~~~~r~ 35 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTA--QGHEVTGLRRS 35 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTCCEEEEECT
T ss_pred CcEEEECCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 579999999999999999998 68999999965
No 496
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=71.34 E-value=9.1 Score=36.97 Aligned_cols=33 Identities=18% Similarity=0.138 Sum_probs=29.4
Q ss_pred CCeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 50 ~~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
...|.|||.|..|...|..++. .|.+|+++++.
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~--~G~~V~~~d~~ 187 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKP--FGVQRFLYTGR 187 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGG--GTCCEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHH--CCCEEEEECCC
Confidence 4689999999999999999988 68999999954
No 497
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=71.33 E-value=3.8 Score=39.39 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=27.6
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
++|+|||+|..|.+.|+.|+..+...++.|+|.+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 34 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLD 34 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3799999999999999999984222479999954
No 498
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=71.27 E-value=3.6 Score=38.97 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=28.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
....++|+|+|-+|.++|..|++ .|. +|+|+.|.
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~--~G~~~v~v~nRt 155 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKD--NFAKDIYVVTRN 155 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHH--TTCSEEEEEESC
T ss_pred cCCEEEEECCcHHHHHHHHHHHH--cCCCEEEEEeCC
Confidence 35689999999999999999998 676 78887754
No 499
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=71.21 E-value=3.4 Score=42.27 Aligned_cols=32 Identities=22% Similarity=0.217 Sum_probs=29.4
Q ss_pred CeEEEECCchHHHHHHHHHhccCCCCcEEEEeCC
Q 011610 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (481)
Q Consensus 51 ~DVvIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (481)
.+|.|||.|..|...|..|++ .|++|.++++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~--~G~~V~v~dr~ 37 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVES--RGYTVAIYNRT 37 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred CcEEEEeeHHHHHHHHHHHHh--CCCEEEEEcCC
Confidence 589999999999999999998 78999999965
No 500
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=71.11 E-value=4.3 Score=39.03 Aligned_cols=34 Identities=15% Similarity=0.310 Sum_probs=27.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011610 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (481)
Q Consensus 49 ~~~DVvIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (481)
....++|+|+|-+|.++|..|++ .|. +|+|+.|.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~--~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAI--EGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHH--cCCCEEEEEECC
Confidence 34689999999999999999998 576 67777653
Done!